BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780741|ref|YP_003065154.1| carboxynorspermidine decarboxylase [Candidatus Liberibacter asiaticus str. psy62] (367 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|15616520|ref|NP_244826.1| carboxynorspermidine decarboxylase [Bacillus halodurans C-125] gi|10176583|dbj|BAB07677.1| carboxynorspermidine decarboxylase [Bacillus halodurans C-125] Length = 379 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 146/370 (39%), Positives = 217/370 (58%), Gaps = 6/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D+ + N+ I K G K++LA K F+ M+ + +Y+ GTT+S LY Sbjct: 10 LPTPCYVVDEALVEKNVKILNGIMKRTGAKIVLAQKAFSMSTMYPLIGKYLTGTTASGLY 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LGHE+ G E H + AY++ EID ++S CD IIFN+ SQL KFK +A K+GLR Sbjct: 70 EARLGHEEMGKENHIFAPAYREDEIDEIVSICDHIIFNSFSQLEKFKQRALDAGSKVGLR 129 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S + DP P SR G K +D + + V+GL FH C+ S L Sbjct: 130 INPECSTQVGHEIYDPCSPGSRFGVKQEDVRQELLDGVSGLHFHTLCQQNSDD-LETTLD 188 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ Q+EWI+ GGG H T DY + +K +KY +++YLEPGEAI N Sbjct: 189 AVEEKFGQWLPQMEWINFGGGHHITRDDYDIPRLEACIKRMQDKYGLEVYLEPGEAIALN 248 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296 L TTVLD+ +N ++ I+D+S H+PD L + P P+T + G + Sbjct: 249 AGYLVTTVLDLHKNGIDIAILDTSATCHMPDVLEMPYRPPLFGSGEPGEKPFTYRLGGPT 308 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ F++P+K GDR+ F D+A Y++ + N FNG+ +P IA K+ DG + +R+ Sbjct: 309 CLTGDVIGDYSFDQPLKSGDRLVFGDMAIYSMVKTNTFNGMPLPAIATKHQDGDCQVVRQ 368 Query: 357 FSYNDYYNNL 366 F Y D+ L Sbjct: 369 FGYQDFKTRL 378 >gi|160932661|ref|ZP_02080051.1| hypothetical protein CLOLEP_01503 [Clostridium leptum DSM 753] gi|156868620|gb|EDO61992.1| hypothetical protein CLOLEP_01503 [Clostridium leptum DSM 753] Length = 376 Score = 298 bits (764), Expect = 7e-79, Method: Composition-based stats. Identities = 138/370 (37%), Positives = 210/370 (56%), Gaps = 5/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP Y++D+ L NL + G K+LLA K F+ + + + Y++GTT+S L+ Sbjct: 8 LQTPCYVVDEALLERNLVILKQVIDRTGCKILLAQKAFSMFACYPLIGSYLNGTTASGLF 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E+ GGETH ++ AY++ EID +LS CD +IFN+ SQ K+K K K GLR Sbjct: 68 EARLGKEEMGGETHIFSPAYREDEIDEILSLCDHVIFNSFSQWEKYKAKVLASGKSAGLR 127 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S + DP P SRLG K + + GL FH CE + Sbjct: 128 LNPEHSTQDHAIYDPCSPGSRLGITLKKFRPDLLDGIEGLHFHTLCEQD-AAPLVETVAV 186 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E++FG +++Q++W++ GGG H T Y + + E+Y VQ+YLEPGEA+ N Sbjct: 187 VEEKFGPWLSQMKWLNFGGGHHITRPGYDIDALVSCVSRVQERYGVQVYLEPGEAVALNA 246 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSC 297 L +TVLD+ EN N+ ++D+S H+PD L I Y + G +C Sbjct: 247 GFLVSTVLDVLENSGNIAVLDTSAACHMPDVLEMPYRPPIAGGGGLGEKAYDYRLGGPTC 306 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 LAGD+ G++ F++P+ G R+ F D+A Y++ + N FNG+N+P I +K DG+I+ +R+F Sbjct: 307 LAGDVIGDYSFDEPLSPGSRVVFCDMAIYSMVKNNTFNGMNLPAIYLKKQDGSIQLVRKF 366 Query: 358 SYNDYYNNLS 367 Y D+ LS Sbjct: 367 GYEDFKTRLS 376 >gi|229542370|ref|ZP_04431430.1| carboxynorspermidine decarboxylase [Bacillus coagulans 36D1] gi|229326790|gb|EEN92465.1| carboxynorspermidine decarboxylase [Bacillus coagulans 36D1] Length = 375 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 146/370 (39%), Positives = 219/370 (59%), Gaps = 6/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID+QKL +NL + K G K++LA K F+ + ++ + +Y+ GTT+S LY Sbjct: 6 LPTPCYVIDEQKLEDNLKVLNGVMKRTGCKIVLAQKAFSMFALYPLIGKYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LGHE+ G E H ++ AY++ EID ++S CD IIFN+ SQL KFK + KK+GLR Sbjct: 66 EARLGHEEMGKENHIFSAAYREGEIDEIVSICDHIIFNSFSQLEKFKGRVLAGGKKVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S + DP P SR G + + V GL FH C+ + L Sbjct: 126 INPECSTQTGHAIYDPCSPGSRFGVTQAQFRPALLDGVTGLHFHTLCQQNADD-LETTLD 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ Q+EWI+ GGG H T +DY + + +K +KY +++YLEPGEA+ N Sbjct: 185 AVEEKFGEWLPQMEWINFGGGHHITREDYDIPLLEKCIKRMQDKYGLEVYLEPGEAVALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 L TTVLD +N ++ I+D+S H+PD L + P PYT + G++ Sbjct: 245 AGYLVTTVLDTVKNGMDIAILDTSASCHMPDVLEMPYRPPLIGAGEPGEKPYTYRLGGQT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD G++ F+KP+K GDR+ F+D+A Y + + FNG+ +P IA++ +G +RE Sbjct: 305 CLAGDTIGDYSFDKPLKEGDRLVFDDMAIYTMVKNTTFNGMPLPAIAIQYKNGDCTIVRE 364 Query: 357 FSYNDYYNNL 366 F Y+D+ L Sbjct: 365 FGYHDFKMRL 374 >gi|154497992|ref|ZP_02036370.1| hypothetical protein BACCAP_01972 [Bacteroides capillosus ATCC 29799] gi|150272982|gb|EDN00139.1| hypothetical protein BACCAP_01972 [Bacteroides capillosus ATCC 29799] Length = 373 Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats. Identities = 131/371 (35%), Positives = 217/371 (58%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPY+L+D+++L++NL+ + + +G ++LLA K F+ + + L QY+ G+T+S LY Sbjct: 4 LRTPYFLVDEERLVHNLEILKDVAERSGARILLAQKAFSMFACYPLLAQYLSGSTASGLY 63 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E F GE H ++ AY++ E +A+L D +FN+ QL K+ +A+ K++GLR Sbjct: 64 EARLGKEHFPGEVHVFSPAYREDEFEALLEFADHFVFNSPRQLEKYALRARDAGKQVGLR 123 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S + DP SRLG + ++ ++GL FH CE S L Sbjct: 124 VNPECSTQEGHAIYDPCSHGSRLGTTLANFKPEQLSLLDGLHFHTLCEQNSDD-LETTLD 182 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 E +FG ++ ++W++LGGG H T DY + ++ ++Y+V++YLEPGEA+V N Sbjct: 183 AFEAKFGPYLKGLKWLNLGGGHHITRADYDRERLIGLVRRLKDRYNVEVYLEPGEAVVLN 242 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296 L T+VL+ N ++ I+D+S H+PD L + + YT + G + Sbjct: 243 AGFLVTSVLETLHNGMDIAILDTSAACHMPDVLEMPYRPPLQNSGQPGEKAYTYRLGGPT 302 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGDI G++ F+ P++ GD + FED+A Y + + N FNG+ +P+I ++ DG + +R+ Sbjct: 303 CLAGDIIGDYSFDNPLQEGDTLVFEDMALYTMVKTNTFNGMPLPSIVWRDRDGNQRVVRQ 362 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 363 FGYEDFKGRLS 373 >gi|317127307|ref|YP_004093589.1| carboxynorspermidine decarboxylase [Bacillus cellulosilyticus DSM 2522] gi|315472255|gb|ADU28858.1| carboxynorspermidine decarboxylase [Bacillus cellulosilyticus DSM 2522] Length = 375 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 141/370 (38%), Positives = 217/370 (58%), Gaps = 6/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D+ + NL + G K++LA K F+ M+ + +Y++GTT+S L+ Sbjct: 6 LPTPCYVVDEALVEKNLKILNGVMARTGCKIVLAQKAFSMTAMYPLIGEYLNGTTASGLF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LGHE+ G E H + AY+D EID ++S CD IIFN+ SQL+KFKDKA + KK+GLR Sbjct: 66 EARLGHEEMGKENHVFAPAYRDDEIDEIISICDHIIFNSFSQLDKFKDKALQAGKKVGLR 125 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S + DP SR G K + V+GL FH C+ S L Sbjct: 126 INPECSTQVGHEIYDPCASGSRFGVTKKHFRPDLLDGVSGLHFHTLCQQNSDD-LETTLH 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ Q+EWI+ GGG H T +DY + + +K E Y + +YLEPGEA+ + Sbjct: 185 AVEEKFGEWLPQMEWINFGGGHHITREDYDIPLLEKCIKRMQENYGLSVYLEPGEAVALD 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296 + TTVLD +N ++ I+D+S H+PD L ++ + P+T + G++ Sbjct: 245 AGYMITTVLDTHQNGMDIAILDTSASCHMPDVLEMPYRPPLFNSGETGEKPFTYRLGGQT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ G++ F+KP++ GDR+ F D+A Y++ + FNG+ +P IA+K DG +++ Sbjct: 305 CLAGDVIGDYSFDKPLQSGDRLVFGDMAIYSMVKNTTFNGMPLPAIAIKAKDGDCHIVQQ 364 Query: 357 FSYNDYYNNL 366 F Y D+ L Sbjct: 365 FGYQDFKMRL 374 >gi|323140845|ref|ZP_08075758.1| carboxynorspermidine decarboxylase [Phascolarctobacterium sp. YIT 12067] gi|322414583|gb|EFY05389.1| carboxynorspermidine decarboxylase [Phascolarctobacterium sp. YIT 12067] Length = 412 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 131/372 (35%), Positives = 209/372 (56%), Gaps = 7/372 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D+ KLLNNL +++ +G +LLA KCF+ + ++ + +Y+ GTT+S +Y Sbjct: 42 LPTPCYVVDEAKLLNNLRLLQHVQCESGAHILLAQKCFSMFRLYPLMGEYLAGTTASGIY 101 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LGHE+ G E H + A+K+ ++ ++ CD IIFN+ +Q K K + +G+R Sbjct: 102 EARLGHEEMGKENHVFAPAFKEQDMQELVQICDHIIFNSFAQFEKHKAVCAQAGVSVGIR 161 Query: 122 INPSVSYSK--FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +NP S + + DP SRLG + + + GL FH CE + Sbjct: 162 VNPECSTQEGEHAIYDPCAYGSRLGVTLANFPQVLPPEIEGLHFHTLCEQNADD-LLTTW 220 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 K E +F + Q++W++LGGG H T DY V+ +K Y V++YLEPGEA+ Sbjct: 221 KAFEAKFSKYFAQLKWLNLGGGHHITRSDYDVEALIDLVKYIRATYHVEVYLEPGEAVAL 280 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGR 295 N L + VLDI N +++I+D+S H+PD L T+ + Y + Sbjct: 281 NAGYLVSEVLDIVHNGLDILILDASAACHMPDVLEMPYRPTLRDGYEADEKQYKYRLSSM 340 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGD+ G++ F+K +K+GD++ FED+A Y++ + N FNGI +P I + + DGT + +R Sbjct: 341 TCLAGDVIGDYSFDKEIKVGDKLIFEDMAIYSMVKNNTFNGIPLPDIVLLHKDGTTELVR 400 Query: 356 EFSYNDYYNNLS 367 F Y D+ LS Sbjct: 401 RFGYEDFKGRLS 412 >gi|225018468|ref|ZP_03707660.1| hypothetical protein CLOSTMETH_02415 [Clostridium methylpentosum DSM 5476] gi|224948777|gb|EEG29986.1| hypothetical protein CLOSTMETH_02415 [Clostridium methylpentosum DSM 5476] Length = 378 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 134/369 (36%), Positives = 220/369 (59%), Gaps = 5/369 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TPYY +D+ L+ NL+ +++ G ++LLA K F+ + ++ + +Y+DGTT+S L+ Sbjct: 11 LPTPYYAVDRNLLIRNLELLRSVKERTGCRILLAQKAFSMYSLYPLIGEYLDGTTASGLF 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E+ G E H ++ AY++ E + +LS C I+FN+ Q +K++ +A K+ G+R Sbjct: 71 EARLGFEEMGKENHIFSPAYREEEFEEILSLCGHIVFNSFEQWDKYRKRALAAGKQCGIR 130 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + DP P SRLG + + ++GL FH CE L Sbjct: 131 INPECSTQDHAIYDPCSPGSRLGVTIDNFRPDLLDGISGLHFHTLCEQN-ADALERTLDA 189 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E++FG +++Q+ W++ GGG H T DY V+ + ++ + Y +++YLEPGEA+ NT Sbjct: 190 VEEKFGPYLSQMNWLNFGGGHHITRADYNVEKLIRCIQRMQQTYQLEVYLEPGEAVALNT 249 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSC 297 L +TVL+I N ++ I+D+S H+PD L I + PYT + G +C Sbjct: 250 GFLVSTVLEIGRNGIDIAILDTSAACHMPDVLEMPYRPEIIGAGNLDEKPYTYRLGGPTC 309 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 LAGDI G++ F++P+K+GDR+ F D+A Y++ + N FNGIN+P+IAV + ++ +R F Sbjct: 310 LAGDIIGDYSFDRPLKVGDRLVFCDMAHYSMVKNNTFNGINLPSIAVTGANNQLELVRSF 369 Query: 358 SYNDYYNNL 366 Y D+ + L Sbjct: 370 GYQDFKSRL 378 >gi|218782485|ref|YP_002433803.1| carboxynorspermidine decarboxylase [Desulfatibacillum alkenivorans AK-01] gi|218763869|gb|ACL06335.1| carboxynorspermidine decarboxylase [Desulfatibacillum alkenivorans AK-01] Length = 376 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 155/369 (42%), Positives = 222/369 (60%), Gaps = 5/369 (1%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y++D+ L NNL ++K AGVK+LLALK FA +G+F + QY+ G T+SSL E Sbjct: 9 QTPCYVVDEALLENNLRILDRVQKQAGVKILLALKGFAMFGVFPLIRQYLPGVTASSLNE 68 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 LG E+FGGE H AY++ E +L C ++FN+ SQ +K+ A K + GLRI Sbjct: 69 ARLGREEFGGEVHLCAPAYREEEFGQLLDCCGHVVFNSFSQKDKYLAAALKKGVRCGLRI 128 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP + + DP P SRLG ++ + +++ + GL FHN CE K + LK + Sbjct: 129 NPEHREVETAIYDPCGPCSRLGVALENFQDGDLEGITGLHFHNLCE-KGADALARTLKVV 187 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 E++FG +I+ +EWI++GGG H T DY V+ C LK F EKY V+IYLEPGEA+ NT Sbjct: 188 EEKFGRYISSMEWINMGGGHHITRGDYDVELLCSTLKAFKEKYGVEIYLEPGEAVALNTG 247 Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCL 298 L +VLD+ N + I+D+S H+PD L + P T + G SCL Sbjct: 248 VLVASVLDVVHNQMPIAILDASAATHMPDVLEMPYRPEVEGAGAPGELAVTYRLAGPSCL 307 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 AGD+ G++ F ++ GD++ F D+A Y + + N FNGIN+P+IAV+ G I+ +R F+ Sbjct: 308 AGDVIGDYSFAAELRPGDQLVFHDMAHYTMVKNNTFNGINLPSIAVRKKTGEIEVLRAFT 367 Query: 359 YNDYYNNLS 367 Y DY N LS Sbjct: 368 YQDYKNRLS 376 >gi|210613857|ref|ZP_03289951.1| hypothetical protein CLONEX_02164 [Clostridium nexile DSM 1787] gi|210150948|gb|EEA81956.1| hypothetical protein CLONEX_02164 [Clostridium nexile DSM 1787] Length = 378 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 135/374 (36%), Positives = 213/374 (56%), Gaps = 10/374 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+I +++L NL+ + G K+LLA K F+ + ++ + QY+ GTT+S LY Sbjct: 6 LPTPCYVIQEEQLRQNLEILKGVMDRTGCKILLAQKAFSMYEVYPLIAQYLSGTTASGLY 65 Query: 62 EVMLGHEK----FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E LG E+ FG ETH ++ AYK+ E D +L+ CD I+FN+ QL +F +A + K Sbjct: 66 EARLGAEEMGIPFGKETHIFSPAYKEEEFDEILTYCDHIVFNSFEQLERFGKRAAEAGKS 125 Query: 118 IGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 +GLRINP S + DP SRLG + ++ V+GL FH CE Sbjct: 126 VGLRINPQYSTQEGHEIYDPCATGSRLGVTIEKFRPELLEYVDGLHFHALCEQD-AQPLH 184 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 LK +E++FG ++ +++W++ GGG H T + Y + + + + EKY ++I+LEPGEA Sbjct: 185 DTLKEVERQFGEWLPKMKWLNFGGGHHITREGYDIALLERCICDMKEKYDLEIFLEPGEA 244 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMV 292 + N L T V +I EN + I+D+S H+PD L + YT + Sbjct: 245 VALNAGVLLTKVEEIVENSIQIAILDTSAACHMPDVLEMPYRPPLQDGYEAEEKAYTYRL 304 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G +CLAGD+ G++ F +P+K GD ++FED+A Y + + N FNG+ +P I +++ DG + Sbjct: 305 AGPTCLAGDVIGDYSFAEPLKRGDTLTFEDMAIYTMVKNNTFNGMRLPAIVLEDKDGECR 364 Query: 353 AIREFSYNDYYNNL 366 +R+F Y D+ L Sbjct: 365 VVRQFGYEDFKMRL 378 >gi|220928558|ref|YP_002505467.1| carboxynorspermidine decarboxylase [Clostridium cellulolyticum H10] gi|219998886|gb|ACL75487.1| carboxynorspermidine decarboxylase [Clostridium cellulolyticum H10] Length = 382 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 142/372 (38%), Positives = 214/372 (57%), Gaps = 7/372 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D++ L+ NL+ ++K G K+LLA K F+ ++ + +Y+ G TSSSL+ Sbjct: 12 LPTPCYIVDERLLIKNLEILDSVQKRTGCKILLAQKGFSMHSVYPLVGKYLAGVTSSSLF 71 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIG 119 E LG+EK G E H Y AY + E D ++ D I+FN+ Q NK+KDK + G Sbjct: 72 EAKLGYEKMGKEVHIYAPAYIEEEFDEIMKYSDHIVFNSFHQWNKYKDKVRTSTKKISFG 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RINP S + + DP FSRLG + + + GL FH CE S + Sbjct: 132 IRINPEYSELEHPIYDPCYKFSRLGVTLPNFKPEGLDGIEGLHFHTMCEQNS-DTLERTI 190 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 K ++++FG +I ++W++ GGG H T DY ++ + + F +KY V +YLEPGEA+ Sbjct: 191 KVVDEKFGRYIKDMKWLNFGGGHHITRPDYDMEALVRSINYFQDKYGVSVYLEPGEAVAL 250 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 NT L VLDI EN N+ I+D+S H+PD + I P+ P+T + G Sbjct: 251 NTGYLVAKVLDIVENEMNIAILDTSAACHMPDVIEMPYRPNIIGAGKPDENPHTYRLGGH 310 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGDI G++ F + +K GDR+ F D+A Y + + N FNG+N+P IA+ N I+ I+ Sbjct: 311 TCLAGDIIGDYSFVQNLKPGDRLVFCDMAHYTMVKNNTFNGVNLPAIALYNEKEGIRIIK 370 Query: 356 EFSYNDYYNNLS 367 +F Y D+ N LS Sbjct: 371 QFGYEDFENRLS 382 >gi|78222123|ref|YP_383870.1| carboxynorspermidine decarboxylase [Geobacter metallireducens GS-15] gi|78193378|gb|ABB31145.1| carboxynorspermidine decarboxylase [Geobacter metallireducens GS-15] Length = 384 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 131/372 (35%), Positives = 202/372 (54%), Gaps = 8/372 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D +L +NL ++K +G K+L+ALK FA W +F + + + G +SS +E Sbjct: 14 PSPAYVVDLGRLRHNLAILDDVQKRSGAKILMALKAFAMWSVFPIIRETLQGVCASSPWE 73 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120 LG E+FG E H++ A+K+ ++ +L+ + ++FN+ +QL +F+ +K + +GL Sbjct: 74 ARLGREEFGREVHSFAAAFKESDVVELLAVSNHLVFNSFNQLERFRPLWEKERGRVSVGL 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + DP P SRLG + V GL FH CE F K Sbjct: 134 RVNPEHSEGHTPIYDPCAPKSRLGIPRAAFEGKSLAGVEGLHFHTLCEQL-FEPLERTAK 192 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 E++FG + ++W++LGGG H T Y + + +K F KY V++YLEPGEAI Sbjct: 193 VFEEKFGPLLHGMKWLNLGGGHHITRAGYDIDALVELVKYFKGKYGVEVYLEPGEAIAIG 252 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L VLD+ N + I+D S H+PD L I P +T + G S Sbjct: 253 TGVLVGEVLDVVRNEMEIAILDVSATCHMPDVLEMPYRPGITGGFDPGEKAHTYRLAGPS 312 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355 CLAGD+ G++ F+KP+K GDR+ FED++ Y + + FNGI P I G ++ +R Sbjct: 313 CLAGDVIGDWSFDKPLKPGDRLVFEDMSHYTMVKTTTFNGIQHPAICTFEPETGELRVVR 372 Query: 356 EFSYNDYYNNLS 367 F Y D+ + LS Sbjct: 373 RFGYEDFKSRLS 384 >gi|253573955|ref|ZP_04851297.1| carboxynorspermidine decarboxylase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846432|gb|EES74438.1| carboxynorspermidine decarboxylase [Paenibacillus sp. oral taxon 786 str. D14] Length = 375 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 129/370 (34%), Positives = 209/370 (56%), Gaps = 6/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D++ L NL I + G K++LA K F+ + + + +Y+ GT +S LY Sbjct: 6 LPTPCYVVDEKLLEQNLKILAGIMERTGAKIILAQKAFSMYTTYPLIGKYLSGTAASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E G E H + AY++ +ID ++ CD +IFN+ SQ+ K++D+ KK+GLR Sbjct: 66 EARLGREAMGKENHVFAPAYREDQIDEIIELCDHVIFNSFSQVEKYRDRVLAAGKKVGLR 125 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S + +P SR G + + ++G FH C+ S L Sbjct: 126 INPECSTQVGHDIYNPCAYGSRFGVTIEHFRPELLDGISGFHFHTLCQQNSDD-LVTTLD 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG +++Q+EWI+ GGG H T +DY + ++ +KY +++YLEPGEA+ N Sbjct: 185 AVEEKFGPWLSQMEWINFGGGHHITREDYDIPLLEACIRRMQDKYGLEVYLEPGEAVALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296 L TTVLD +N ++ IVD+S H+PD L + P PYT + G + Sbjct: 245 AGYLITTVLDTMKNGLDIAIVDASASCHMPDVLEMPYRPPLFGSGEPGEKPYTYRLGGPT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL+GD G++ F++P+K GDR+ F D+A Y++ + FNG+ +P + +++ DG + + E Sbjct: 305 CLSGDNIGDYSFDEPLKPGDRLVFGDMAIYSMVKNTTFNGMPLPALVLQHKDGDCEILHE 364 Query: 357 FSYNDYYNNL 366 F Y D+ L Sbjct: 365 FGYEDFKMRL 374 >gi|307635049|gb|ADI85295.2| carboxynorspermidine/carboxyspermidine decarboxylase [Geobacter sulfurreducens KN400] Length = 384 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 130/372 (34%), Positives = 208/372 (55%), Gaps = 8/372 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D +L +NL +++ +G K+L+ALK FA W +F + + + G +SS +E Sbjct: 14 PSPAYVVDLGRLRHNLAILDQVQRRSGAKILMALKAFAMWSVFPIIRETLHGVCASSPWE 73 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120 LG E+FG E H++ A+K+ ++ +L + ++FN+ +QL +F+ +K + +GL Sbjct: 74 ARLGREEFGREVHSFAAAFKESDVVELLQTSNHLVFNSFNQLERFRPLWEKERGRVSVGL 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + DP P SRLG ++ ++ V GL FH CE F + K Sbjct: 134 RVNPEHSEGHTPIYDPCAPASRLGIPRREFDGRSLEGVEGLHFHTLCEQL-FEPLARTAK 192 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 E++FG F+ ++W++LGGG H T + Y + + + F KY V++YLEPGEAI Sbjct: 193 VFEEKFGPFLHGMKWLNLGGGHHITREGYDIDALVELITYFKRKYGVEVYLEPGEAIAIG 252 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L VLD+ N ++ I+D S H+PD L I P +T + G S Sbjct: 253 TGILVGEVLDVVHNEMDIAILDVSATCHMPDVLEMPYRPGITAGFDPGEKAHTYRLAGPS 312 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355 CLAGD+ G++ F+KP+K GDR+ FED++ Y + + FNGI P I G ++ +R Sbjct: 313 CLAGDVIGDWSFDKPLKPGDRLVFEDMSHYTMVKTTTFNGIQHPAICTFEPETGELRVVR 372 Query: 356 EFSYNDYYNNLS 367 +F Y D+ + LS Sbjct: 373 KFGYEDFRSRLS 384 >gi|317131719|ref|YP_004091033.1| carboxynorspermidine decarboxylase [Ethanoligenens harbinense YUAN-3] gi|315469698|gb|ADU26302.1| carboxynorspermidine decarboxylase [Ethanoligenens harbinense YUAN-3] Length = 375 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 139/371 (37%), Positives = 216/371 (58%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D+ L+ NLD + G ++LLA K F+ + ++ + QY+ GT +S LY Sbjct: 6 LSTPCYVVDESLLVRNLDILRGVMDRTGCRILLAQKAFSMYALYPLIGQYLSGTAASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E+ E H ++ Y++ + D ++S CD IIFN+ SQL KFK++A + K +GLR Sbjct: 66 EARLGREEMDKENHVFSPGYRNEDFDEIVSLCDHIIFNSFSQLEKFKNRALRAGKSVGLR 125 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP+ S L DP P SRLG ++ + V GL FH CE ++ Sbjct: 126 INPAYSTQEGHELYDPCAPGSRLGVTRENFRPDRLDGVEGLHFHTLCEQD-AAPLVRTVE 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W++ GGG H T + Y + + E Y VQ+YLEPGEA+ N Sbjct: 185 AVEEQFGPWLPRMKWLNFGGGHHITREGYDLAALEACIHRVQETYGVQVYLEPGEAVALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 L TTVLD N ++ I+D+S H+PD L + P+ PYT + G + Sbjct: 245 AGFLVTTVLDTFRNGIDIAILDTSAACHMPDVLEMPYRPPLLGAGIPDEKPYTYRLGGPT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ G++ F++P+ GDR++F D+A Y++ + N FNG+ +P+IA++N DG K + Sbjct: 305 CLAGDVIGDYSFDRPLAPGDRLTFGDMAIYSMVKNNTFNGMPLPSIALRNADGDCKLLHR 364 Query: 357 FSYNDYYNNLS 367 F YND+ LS Sbjct: 365 FGYNDFKCRLS 375 >gi|89896566|ref|YP_520053.1| hypothetical protein DSY3820 [Desulfitobacterium hafniense Y51] gi|219667607|ref|YP_002458042.1| carboxynorspermidine decarboxylase [Desulfitobacterium hafniense DCB-2] gi|89336014|dbj|BAE85609.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537867|gb|ACL19606.1| carboxynorspermidine decarboxylase [Desulfitobacterium hafniense DCB-2] Length = 376 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 141/372 (37%), Positives = 208/372 (55%), Gaps = 7/372 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D+ L NL+ +++ G K+LLALK F+ +F + QY+ G +SSL+ Sbjct: 6 LPTPSYVVDENLLRRNLEILQSVQERTGCKILLALKGFSMHAVFPLVGQYLKGIAASSLF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119 E LG + G E H Y+ AY + E D +L CD ++FN+ Q KFKDK + G Sbjct: 66 EARLGVAEMGKEVHVYSPAYIEEEFDELLGYCDHMVFNSFDQWRKFKDKVKNHPGHIECG 125 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S + +P SRLG + E++ + GL FH CE S L Sbjct: 126 IRVNPEYSEIATDIYNPCYQNSRLGVTLANFRPEELEGIAGLHFHTLCEQNS-DTLERTL 184 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 K +E++FG + +++W++LGGG H T DY ++ + + EKY V+IYLEPGEAI Sbjct: 185 KVVEEKFGEHLRKMKWLNLGGGHHITRPDYDIETLVRCILHLQEKYGVEIYLEPGEAIAL 244 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGR 295 NT L T VLDI +N + ++D+S H+PD L I PYT + G Sbjct: 245 NTGFLVTKVLDIVDNGMKIALLDASAACHMPDVLEMPYRPAIINGGEPGEHPYTYRLGGN 304 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGD+ G++ F +P+K GD++ F D+A Y + + N FNG+N+P I + N K IR Sbjct: 305 TCLAGDVIGDYSFAEPLKPGDKLIFCDMAHYTMVKNNMFNGVNLPNIMLYNEKEGFKLIR 364 Query: 356 EFSYNDYYNNLS 367 F Y D+ N LS Sbjct: 365 RFGYEDFKNRLS 376 >gi|303239157|ref|ZP_07325686.1| carboxynorspermidine decarboxylase [Acetivibrio cellulolyticus CD2] gi|302593202|gb|EFL62921.1| carboxynorspermidine decarboxylase [Acetivibrio cellulolyticus CD2] Length = 379 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 147/373 (39%), Positives = 219/373 (58%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D++ L NL+ +++ G +LLALK F+ +F + QY+ G TSSSL+ Sbjct: 8 LPTPCYIVDERLLRKNLEILHSVQERTGCSILLALKGFSMHSVFPLVGQYLKGVTSSSLF 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK---LHKKI 118 E LG EK G E HAY AY + E D ++ CD I+FN+ Q KFKDK + + Sbjct: 68 EARLGFEKMGKEVHAYAPAYIEEEFDELIKYCDHIVFNSFDQWRKFKDKVKNNSSKKIEC 127 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 G+R+NP S + +P SRLG + E+ ++GL FH CE S Sbjct: 128 GIRVNPEYSEISTAIYNPCYKNSRLGVTLSNFKPDELDGIDGLHFHTMCEQNS-DTLLRT 186 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +K ++++FG FI +++W++LGGG H T DY ++ + + F +KY V IYLEPGEAI Sbjct: 187 IKVVDEKFGEFIKRMKWVNLGGGHHITRPDYDIETLIRSILYFKDKYGVDIYLEPGEAIA 246 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCG 294 NT L VLDI +N + I+D+S H+PD L I P+ P+T + G Sbjct: 247 LNTGFLVAKVLDIVDNGMKIAILDASAACHMPDVLEMPYRPNIIDAGSPDEYPFTYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +CLAGD+ G++ F++P+K GD++ F D+A Y + + N FNG+N+P+IA+ N + IK I Sbjct: 307 NTCLAGDVIGDYSFKQPLKPGDKLVFCDMAHYTMVKNNTFNGVNLPSIALFNEEEGIKII 366 Query: 355 REFSYNDYYNNLS 367 R+F Y D+ N LS Sbjct: 367 RQFKYEDFKNRLS 379 >gi|325291264|ref|YP_004267445.1| carboxynorspermidine decarboxylase [Syntrophobotulus glycolicus DSM 8271] gi|324966665|gb|ADY57444.1| carboxynorspermidine decarboxylase [Syntrophobotulus glycolicus DSM 8271] Length = 377 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 134/372 (36%), Positives = 215/372 (57%), Gaps = 6/372 (1%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++ TP Y+I+++ L+ NL+ +++ +G ++LLA K F+ + ++ L +Y+ GTT+S L Sbjct: 7 LVPTPSYVIEEKLLVKNLEILKSVQERSGARILLAQKAFSMFRVYPLLARYLCGTTASGL 66 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE LG E+FG E H ++ AY+D E + +L+ D I+FN+ +Q KF + KK GL Sbjct: 67 YEARLGREEFGKEVHIFSPAYRDDEFEEILAVADHIVFNSFAQWEKFGRRTLAAGKKCGL 126 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 RINP S L +P P SRLG + ++ ++GL H C+ + L Sbjct: 127 RINPECSTQNGPDLYNPCAPHSRLGVTKANFQPDKLAGISGLHLHTLCQQN-ADALAETL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 K E FG ++ +EW++LGGG H T +DY + + + + Y + +YLEPGEA+ Sbjct: 186 KAFEAGFGEYLYDLEWLNLGGGHHITREDYDLDLLVRTISRLRQTYDLTVYLEPGEAVAL 245 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 ++ L ++VLDI +N N+ I+D+S H+PD L I P YT + G Sbjct: 246 DSGFLVSSVLDILDNGMNIAILDTSAACHMPDVLEMPYRPEIIGAGQPGEKKYTYRLGGP 305 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGDI G++ F++P+ GDR+ F D+A Y++ + N FNG+ +P I ++ GT + IR Sbjct: 306 TCLAGDIIGDYSFDRPLFPGDRLVFCDMAIYSMVKNNTFNGMRLPDIILRTAGGTDEIIR 365 Query: 356 EFSYNDYYNNLS 367 F Y D+ + LS Sbjct: 366 SFGYTDFKDRLS 377 >gi|39997633|ref|NP_953584.1| carboxynorspermidine decarboxylase [Geobacter sulfurreducens PCA] gi|39984525|gb|AAR35911.1| carboxynorspermidine decarboxylase [Geobacter sulfurreducens PCA] Length = 400 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 130/372 (34%), Positives = 208/372 (55%), Gaps = 8/372 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D +L +NL +++ +G K+L+ALK FA W +F + + + G +SS +E Sbjct: 30 PSPAYVVDLGRLRHNLAILDQVQRRSGAKILMALKAFAMWSVFPIIRETLHGVCASSPWE 89 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120 LG E+FG E H++ A+K+ ++ +L + ++FN+ +QL +F+ +K + +GL Sbjct: 90 ARLGREEFGREVHSFAAAFKESDVVELLQTSNHLVFNSFNQLERFRPLWEKERGRVSVGL 149 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + DP P SRLG ++ ++ V GL FH CE F + K Sbjct: 150 RVNPEHSEGHTPIYDPCAPASRLGIPRREFDGRSLEGVEGLHFHTLCEQL-FEPLARTAK 208 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 E++FG F+ ++W++LGGG H T + Y + + + F KY V++YLEPGEAI Sbjct: 209 VFEEKFGPFLHGMKWLNLGGGHHITREGYDIDALVELITYFKRKYGVEVYLEPGEAIAIG 268 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L VLD+ N ++ I+D S H+PD L I P +T + G S Sbjct: 269 TGILVGEVLDVVHNEMDIAILDVSATCHMPDVLEMPYRPGITAGFDPGEKAHTYRLAGPS 328 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355 CLAGD+ G++ F+KP+K GDR+ FED++ Y + + FNGI P I G ++ +R Sbjct: 329 CLAGDVIGDWSFDKPLKPGDRLVFEDMSHYTMVKTTTFNGIQHPAICTFEPETGELRVVR 388 Query: 356 EFSYNDYYNNLS 367 +F Y D+ + LS Sbjct: 389 KFGYEDFRSRLS 400 >gi|317051695|ref|YP_004112811.1| carboxynorspermidine decarboxylase [Desulfurispirillum indicum S5] gi|316946779|gb|ADU66255.1| carboxynorspermidine decarboxylase [Desulfurispirillum indicum S5] Length = 377 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 127/371 (34%), Positives = 209/371 (56%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+++++KL +NL+ +++ +G K+LLALK FA W F + + + GT +S L+ Sbjct: 8 VPTPCYVLEEEKLQHNLNILDRVQRESGAKILLALKGFAMWSTFPMIREVLHGTAASGLH 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-KKIGL 120 E LG E+ G E H ++ A+ + + +L D I+FN+ SQ + + ++ G+ Sbjct: 68 EARLGCEEMGREVHTFSPAFTEESLREILGYSDHIVFNSFSQWERLQHVIREKEGVSCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + + +P FSR G + ++G+ FH +CE S L+ Sbjct: 128 RVNPEYSEVEPPIYNPCVAFSRFGVTRDQFRPDLLDGLDGIHFHTHCEQNS-DALERTLE 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E +F F Q++W++ GGG H T DY V + +++F +Y+++IYLEPGEA+ Sbjct: 187 VVEAKFSQFFPQLKWVNFGGGHHITRADYDVDRLIRIIQQFRHRYNLEIYLEPGEAVGWQ 246 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L +V+DI N ++ I+D+S AH+PD L I P P+T + G + Sbjct: 247 TGPLVASVVDILHNGMDIAILDASAAAHMPDVLEMPYRPAIRGAAEPGELPFTYRLGGNT 306 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ G++ F P++ GDRI FED+ Y + + N FNG+ +P+IA+ G + +R+ Sbjct: 307 CLAGDVIGDYSFASPLQPGDRIVFEDMTHYTMVKNNTFNGVPLPSIAIWRKSGRLDVVRK 366 Query: 357 FSYNDYYNNLS 367 F Y DY LS Sbjct: 367 FGYEDYRMRLS 377 >gi|56461100|ref|YP_156381.1| carboxynorspermidine decarboxylase [Idiomarina loihiensis L2TR] gi|56180110|gb|AAV82832.1| Carboxynorspermidine decarboxylase [Idiomarina loihiensis L2TR] Length = 377 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 135/370 (36%), Positives = 211/370 (57%), Gaps = 5/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y++D++ L NL+ +++ +G ++LALK +A W F + QY+ G T+SS++ Sbjct: 9 IPSPCYVLDEKLLRKNLELMQKVQEQSGADIILALKGYAMWSAFPLIRQYLKGCTASSVW 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F E HAY AYK +ID +L + + FN+VSQ +K++++ +GLR Sbjct: 69 EAKLAAEEFSREVHAYAPAYKQEDIDELLPLVNHLSFNSVSQWHKYREQTADAGVSVGLR 128 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP ++ L DP+ P SRLG + + + ++ V GL HN CE SF L Sbjct: 129 INPEHQEAETELYDPSAPGSRLGIRASELNQQDLTGVEGLHVHNLCECDSFA-LERTLDA 187 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E FG + Q++W++LGGG T + Y V ++LK E Y +Q+ LEPG A+ T Sbjct: 188 VENRFGEQLKQMKWLNLGGGHLMTRQGYDVDHLIKQLKRLRETYDLQVILEPGSAVAWQT 247 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRSC 297 L V+DI EN + ++D S AH+PD L I P ++ + G SC Sbjct: 248 GPLVCEVVDIVENQGQIALLDISATAHMPDVLEMPYRPVITGAGLPAEKAFSYRLGGNSC 307 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 LAGD+ GE+ F++P+ +GDR+ FED+ Y + + ++FNG+ P I + +G +R+F Sbjct: 308 LAGDVIGEYSFDQPLAVGDRLVFEDMMHYTMVKTSFFNGVQHPAIGILRENGQFDCVRQF 367 Query: 358 SYNDYYNNLS 367 SY D+ N LS Sbjct: 368 SYEDFRNRLS 377 >gi|325660854|ref|ZP_08149482.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium 4_1_37FAA] gi|325472928|gb|EGC76138.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium 4_1_37FAA] Length = 378 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 136/372 (36%), Positives = 220/372 (59%), Gaps = 6/372 (1%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++ TPY+++D+++LL+NL+ + + +G K+LLA K F+ + ++ L +Y+ GTT+S L Sbjct: 8 VVSTPYFVVDERRLLHNLEILKQVAEESGCKILLAQKAFSMFSVYPLLRKYLCGTTASGL 67 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE LG E+FGGETH ++ AY+ E D +L D ++FN+ +Q+ K+ +A+ K IGL Sbjct: 68 YEARLGKEEFGGETHVFSPAYRAEEFDELLQYVDDLVFNSPAQVRKYGIRAKNAGKSIGL 127 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 R+NP S + DP P SRLG + E + ++G+ H CE S + Sbjct: 128 RVNPECSTQEGHAIYDPCAPGSRLGTTLEAFEEELVPLLDGIHMHTLCEQNSDD-LEKTV 186 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + +E +FG ++ Q++W++LGGG H T DY + + ++ EKY +++YLEPGEA+V Sbjct: 187 EALEDKFGKWLPQMKWLNLGGGHHITRADYDRERLVRIIRRLREKYQLEVYLEPGEAVVL 246 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 N L +V++I N + I+D+S H+PD L + P YT G Sbjct: 247 NAGDLVASVMEIVHNNMEIAILDTSAACHMPDVLEMPYRPPVQKSGNPGEKQYTYRFAGP 306 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGD+ G++ FEKP+ G R+ FED+A Y + + N FNG+ +P+I ++ +G +R Sbjct: 307 TCLAGDVIGDYSFEKPLTEGSRVVFEDMALYTMVKTNTFNGMALPSIVFRDQEGEEHLVR 366 Query: 356 EFSYNDYYNNLS 367 F Y D+ N LS Sbjct: 367 TFGYEDFKNRLS 378 >gi|291544655|emb|CBL17764.1| carboxynorspermidine decarboxylase [Ruminococcus sp. 18P13] Length = 383 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 134/371 (36%), Positives = 217/371 (58%), Gaps = 7/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D+ +L NL+ +++ +G K+LLA K F+ + + + +Y+ G+T+S LY Sbjct: 14 VPTPCYIVDEARLRRNLELLQMVQQRSGAKILLAQKAFSMYRTYPMIRKYLAGSTASGLY 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E L E+ GGE H Y+ AYK E D +L D I+FN+ +Q +++D+ A G Sbjct: 74 EAKLAREEMGGEVHIYSPAYKPEEFDEILRISDHIVFNSCAQWKRYRDQVQACSRKISCG 133 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRINP + ++ L +P SRLG + E ++ ++GL FH CE S L Sbjct: 134 LRINPEYAETETDLYNPCFTGSRLGTTLANLEEDALEGLDGLHFHTMCEQNS-DTLERTL 192 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + +E++FG ++++++W++ GGG H T DY V+ + ++F+EKY VQ+YLEPGEA+ Sbjct: 193 RVVEEKFGKYLSRMQWVNFGGGHHITRPDYDVELLIRLCQDFAEKYHVQVYLEPGEAVAL 252 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGR 295 + L T VLD N ++ IVD+S H+PD L I P YT + Sbjct: 253 HAGYLVTQVLDFVHNGLDIAIVDASAACHMPDVLEMPYRPEILGAGQPGELAYTYRLGAP 312 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGD+ G++ F P++IGDR+ F D+A Y++ + N FNG+ +P I + + DG ++ +R Sbjct: 313 TCLAGDVIGDYSFAAPLQIGDRLVFCDMAIYSMVKNNTFNGMPLPAILLAHADGRVETVR 372 Query: 356 EFSYNDYYNNL 366 +F Y D+ L Sbjct: 373 QFGYADFKMRL 383 >gi|255658390|ref|ZP_05403799.1| carboxynorspermidine decarboxylase [Mitsuokella multacida DSM 20544] gi|260849723|gb|EEX69730.1| carboxynorspermidine decarboxylase [Mitsuokella multacida DSM 20544] Length = 384 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 131/372 (35%), Positives = 202/372 (54%), Gaps = 9/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+I K L +NL + ++ G +LLA KCF+ + + + +Y+ GTT+S LY Sbjct: 15 VPTPSYVIAKDLLEHNLRILHEVEESTGAHVLLAQKCFSMYHYYPLIAEYLSGTTASGLY 74 Query: 62 EVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E LGHE+ FG ETH ++ AYK+ E + C I+FN+ +Q KF A Sbjct: 75 EARLGHEEMGKFGKETHVFSPAYKEAEFAELTKICGHIVFNSFAQWKKFGPAALAAGVSC 134 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 GLRINP S + + DP SRLG + +D ES ++ + GL FH CE + Sbjct: 135 GLRINPERSTQEHAIYDPCAAGSRLGVRLRDFDESALEGLEGLHFHTLCEQG-ADALAVT 193 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 L+ +E +FG ++ Q++WI+ GGG H T Y + + ++ ++Y + +Y+EPGEA+ Sbjct: 194 LEAVEAKFGKYLPQMKWINFGGGHHITKPGYDIALLKKCIRHMQQEYGLTVYIEPGEAVA 253 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCG 294 N L VLDI + I+D+S H+PD + + P +T G Sbjct: 254 LNAGFLVAEVLDIQQENAI-AILDTSAACHMPDVIEMPYRPPVLGSGEPGEKAHTYTFAG 312 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +CLAGD G + F++P+ IGDRI F D+A Y + + N FNG+ +P I + DG+ + + Sbjct: 313 PTCLAGDTIGTYSFDEPLAIGDRIVFCDMAIYTMVKNNTFNGMPLPAIIASDEDGSWQTV 372 Query: 355 REFSYNDYYNNL 366 R+F Y D+ L Sbjct: 373 RQFGYEDFKMRL 384 >gi|169351540|ref|ZP_02868478.1| hypothetical protein CLOSPI_02320 [Clostridium spiroforme DSM 1552] gi|169291762|gb|EDS73895.1| hypothetical protein CLOSPI_02320 [Clostridium spiroforme DSM 1552] Length = 369 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 145/371 (39%), Positives = 229/371 (61%), Gaps = 7/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPYYLID++ L NL Y+++ G K+LLA KCF+ + ++ + +Y+DGTT+S L+ Sbjct: 1 MKTPYYLIDEELLKKNLKVLHYVKEKTGCKILLAQKCFSMFSVYPLIRKYLDGTTASGLF 60 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG+E+ E H Y+ AY+D EI+ +++ CD ++FN+ +Q K+K+ A+K + G+R Sbjct: 61 EAKLGYEEMKKENHVYSAAYRDDEIEEIMNICDHVVFNSFNQWAKYKELAKKTNTSCGIR 120 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S + DP +SR+G ++ E + + GL FH CE S +K Sbjct: 121 INPECSTQVGHEIYDPCAKYSRMGVTLENFQEDLLDGIEGLHFHTLCEQNSDD-LVTTIK 179 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ Q++W++ GGG H T DY ++ + E EKY VQ+YLEPGEA+ N Sbjct: 180 AVEEKFGKYLYQMKWLNFGGGHHITRDDYDLETLINVINEIKEKYQVQVYLEPGEAVALN 239 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGRS 296 L ++VLDI N + I+D+S H+PD L I + P YT + G + Sbjct: 240 AGFLVSSVLDIINNGIVIAIMDTSAACHMPDVLEMPYRPDIIDSDKPRVKKYTYRLGGPT 299 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ ++ F++P+KIG ++ F+D+A Y++ + N FNG+N+P+I +K D +K IRE Sbjct: 300 CLAGDVISDYSFDQPLKIGQQLWFKDMAIYSMVKNNTFNGMNLPSIVLKQGDK-LKVIRE 358 Query: 357 FSYNDYYNNLS 367 F Y+D+ N LS Sbjct: 359 FGYDDFKNRLS 369 >gi|222054774|ref|YP_002537136.1| carboxynorspermidine decarboxylase [Geobacter sp. FRC-32] gi|221564063|gb|ACM20035.1| carboxynorspermidine decarboxylase [Geobacter sp. FRC-32] Length = 384 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 127/372 (34%), Positives = 208/372 (55%), Gaps = 8/372 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D +L +NL ++K +G K+LLALK F+ W +F + + + G +SS +E Sbjct: 14 PSPAYVVDLGRLRHNLAILDDVQKRSGAKILLALKAFSMWSVFPIIRETLYGVCASSPWE 73 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120 LG E+F E H++ A+K+ ++ +L + ++FN+ +QL +F+ +K + +GL Sbjct: 74 ARLGREEFDREVHSFAAAFKERDVVELLPLSNHLVFNSFNQLERFRPLWEKERGRVSVGL 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + DP SRLG ++ ++ V GL FH CE F +K Sbjct: 134 RVNPEHSEGHTAIYDPCAVNSRLGIPRREFEGRSLEGVEGLHFHTLCEQL-FEPLERTVK 192 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +++FG F+ ++W++LGGG H T + Y + + +K KY V++YLEPGEAI Sbjct: 193 VFDEKFGSFMPGMKWLNLGGGHHITREGYDIDGLVELVKHLKAKYDVEVYLEPGEAIAIG 252 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L V+D+ +N ++ I+D S H+PD L I P +T + G S Sbjct: 253 TGILVGEVMDVVKNGMDIAILDVSATCHMPDVLEMPYRPGITGGFDPGVKEHTYRLGGPS 312 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355 CLAGD+ G++ FEKP++ GDR++FED++ Y + + FNGI P I +K +R Sbjct: 313 CLAGDVIGDWSFEKPLQPGDRLAFEDMSHYTMVKTTTFNGIQHPAICTYEPETEELKVVR 372 Query: 356 EFSYNDYYNNLS 367 +F Y+D+ + LS Sbjct: 373 QFDYSDFKSRLS 384 >gi|326790656|ref|YP_004308477.1| carboxynorspermidine decarboxylase [Clostridium lentocellum DSM 5427] gi|326541420|gb|ADZ83279.1| carboxynorspermidine decarboxylase [Clostridium lentocellum DSM 5427] Length = 377 Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 137/371 (36%), Positives = 215/371 (57%), Gaps = 7/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D++ L+ NL+ + + AG ++LLA K F+ + F + QY+ G TSSSL+ Sbjct: 8 VPTPCYVVDERLLIKNLEILKKVEEEAGCRILLATKAFSMYETFPLIAQYLSGVTSSSLH 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E LG+E+ G E H Y AYK+ E D ++ C+ I+FN+ SQ NK+K+K A G Sbjct: 68 EARLGYEEMGKEVHIYAAAYKEEEFDKIMHYCNHIVFNSFSQWNKYKEKVKAAGKTISCG 127 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRINP + + + +P P SR+G + +++ + GL FH CE S +L Sbjct: 128 LRINPEYAEVETEIYNPCAPKSRMGITLEYFEGEDLEGIEGLHFHAMCEQNS-DTLERIL 186 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 K +E++FG ++ Q++WI+ GGG H T DY ++ + +K E Y +++YLEPGEA+ Sbjct: 187 KVVEEKFGAYLHQMKWINFGGGHHITRADYDLEKLIKCIKHIKETYDIEVYLEPGEAVAL 246 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295 NT L +TVL+ N ++ I+D+S H+PD L I YT + Sbjct: 247 NTGYLVSTVLETLHNDIDIAILDTSAACHMPDVLEMPYRPQIIGSGLAGEKAYTYRLGSA 306 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGD+ G++ F+ P+K GDR+ F D+A Y + + N FNGIN+P+I + + K I+ Sbjct: 307 TCLAGDVIGDYSFDAPLKEGDRLVFCDMAHYTMVKNNTFNGINLPSIVLYSEKEGFKIIK 366 Query: 356 EFSYNDYYNNL 366 F Y D+ + L Sbjct: 367 SFGYEDFKSRL 377 >gi|331085412|ref|ZP_08334497.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407650|gb|EGG87148.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 378 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 136/372 (36%), Positives = 220/372 (59%), Gaps = 6/372 (1%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++ TPY+++D+++LL+NL+ + + +G K+LLA K F+ + ++ L +Y+ GTT+S L Sbjct: 8 VVCTPYFVVDERRLLHNLEILKQVAEESGCKILLAQKAFSMFSVYPLLRKYLCGTTASGL 67 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE LG E+FGGETH ++ AY+ E D +L D ++FN+ +Q+ K+ +A+ K IGL Sbjct: 68 YEARLGKEEFGGETHVFSPAYRAEEFDELLQYVDDLVFNSPAQVRKYGIRAKNAGKSIGL 127 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 R+NP S + DP P SRLG + E + ++G+ H CE S + Sbjct: 128 RVNPECSTQEGHAIYDPCAPGSRLGTTLEAFEEELVPLLDGIHMHTLCEQNSDD-LEKTV 186 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + +E +FG ++ Q++W++LGGG H T DY + + ++ EKY +++YLEPGEA+V Sbjct: 187 EALEDKFGKWLPQMKWLNLGGGHHITRADYDRERLVRIIRRLREKYQLEVYLEPGEAVVL 246 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 N L +V++I N + I+D+S H+PD L + P YT G Sbjct: 247 NAGDLVASVMEIVHNNMEIAILDTSAACHMPDVLEMPYRPPVQKSGNPGEKQYTYRFAGP 306 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGD+ G++ FEKP+ G R+ FED+A Y + + N FNG+ +P+I ++ +G +R Sbjct: 307 TCLAGDVIGDYSFEKPLTEGSRVVFEDMALYTMVKTNTFNGMALPSIVFRDQEGEEHLVR 366 Query: 356 EFSYNDYYNNLS 367 F Y D+ N LS Sbjct: 367 TFGYEDFKNRLS 378 >gi|302384815|ref|YP_003820637.1| carboxynorspermidine decarboxylase [Clostridium saccharolyticum WM1] gi|302195443|gb|ADL03014.1| carboxynorspermidine decarboxylase [Clostridium saccharolyticum WM1] Length = 373 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 131/370 (35%), Positives = 209/370 (56%), Gaps = 8/370 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP Y+ID+ +L NLD ++++ G ++LLA K F+ + + + +Y+DGTT+S LY Sbjct: 6 LKTPCYVIDEGRLEKNLDILKKVKESTGCRILLAQKAFSCFAEYPLIGRYLDGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E+ G ETH + AYK+ + + CD I+FN+ SQL K+ + K G+R Sbjct: 66 EARLGREEMGLETHVFAPAYKEEDFKELTEICDHIVFNSFSQLEKYHN--SLGGVKAGIR 123 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S + DP P SRLG E + ++G FH CE S L Sbjct: 124 INPQCSTQEGHEIYDPCAPGSRLGVPLDHFKEEWLPWLSGFHFHTLCEQNSDD-LKKTLD 182 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG +++ + W+++GGG H T +DY + +K EKY +Q+YLEPGEA+ N Sbjct: 183 AVEEKFGKYLSGLSWLNMGGGHHITREDYDIGLLETCIKRIKEKYGLQVYLEPGEAVALN 242 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296 L T V+D+ +N +I+D+S H+PD L + + +T + + Sbjct: 243 AGYLVTEVMDVVDNGIKTLILDASAACHMPDVLEMPYRPPLKDSGKPGEKAFTYRLSSCT 302 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ G++ F++ +K GD++ F D+A Y++ + N FNG+ +P IA+ + +G I+ Sbjct: 303 CLAGDVIGDYSFDRELKPGDKLYFMDMAIYSMVKNNTFNGMPLPAIAIMDKEGDCHVIKR 362 Query: 357 FSYNDYYNNL 366 F Y D+ N L Sbjct: 363 FGYEDFKNRL 372 >gi|326201069|ref|ZP_08190941.1| carboxynorspermidine decarboxylase [Clostridium papyrosolvens DSM 2782] gi|325988637|gb|EGD49461.1| carboxynorspermidine decarboxylase [Clostridium papyrosolvens DSM 2782] Length = 382 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 143/372 (38%), Positives = 214/372 (57%), Gaps = 7/372 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D++ L+ NL+ I+K G K+LLA K F+ ++ + +Y+ G TSSSL+ Sbjct: 12 LPTPCYIVDERLLVKNLEILDSIQKRTGCKILLAQKGFSMHSVYPLIGKYLAGVTSSSLF 71 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119 E LG+EK G E H Y AY + E D ++ CD I+FN+ Q K+K K + KK G Sbjct: 72 EARLGYEKMGKEVHIYAPAYIEEEFDEIMKYCDHIVFNSFHQWGKYKGKVKTATKKIGCG 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RINP S + + DP FSRLG + E++ + GL FH CE S + Sbjct: 132 IRINPEYSELEHPIYDPCYKFSRLGVTLPNFKPEELEGIEGLHFHTMCEQNS-DTLERTI 190 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 K ++++FG +I ++W++ GGG H T DY ++ + + F +KY + +YLEPGEA+ Sbjct: 191 KVVDEKFGRYIKDMKWLNFGGGHHITRPDYDIEALVRSINYFQDKYGIDVYLEPGEAVAL 250 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295 NT L VLD EN N+ I+D+S H+PD L I P+ T + G Sbjct: 251 NTGYLVAKVLDTVENGMNIAILDTSAACHMPDVLEMPYRPNIIGAGMPDENLVTYRLGGH 310 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGDI G++ F + +K GDR+ F D+A Y++ + N FNGIN+P IA+ + IK I+ Sbjct: 311 TCLAGDIIGDYSFNQKLKPGDRLVFCDMAHYSMVKNNTFNGINLPAIALYSEKEGIKIIK 370 Query: 356 EFSYNDYYNNLS 367 +F Y D+ LS Sbjct: 371 QFGYEDFEGRLS 382 >gi|160881179|ref|YP_001560147.1| carboxynorspermidine decarboxylase [Clostridium phytofermentans ISDg] gi|160429845|gb|ABX43408.1| carboxynorspermidine decarboxylase [Clostridium phytofermentans ISDg] Length = 379 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 138/372 (37%), Positives = 207/372 (55%), Gaps = 7/372 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++++ L NL I G K+LLA K F+ + + + Y+ GTT+SSL+ Sbjct: 9 IPTPSYVVEERLLKRNLSLLKSIMDQTGCKILLAQKAFSMFYYYPLIGSYLAGTTASSLF 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIG 119 E LG E+ GGE H +N AY++ E++ ++S CD I+FNT Q K+K+ QK G Sbjct: 69 EARLGKEEMGGEVHIFNPAYQESEMEQIISLCDHIVFNTPKQWLKYKEVIQKSGKKVSCG 128 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LR+NP S + L +P SRLG + E +++ + GL FH CE S L Sbjct: 129 LRVNPQYSEIEVDLYNPCAKGSRLGTILDNIQEEDLEGLEGLHFHTMCEQNS-DVLVRTL 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 K +E++F + +++WI+ GGG H T +DY V+ + E Y +++YLEPGEAI Sbjct: 188 KVVEEKFSFLLKKMKWINFGGGHHITREDYDVESLISSILHMKETYGIEVYLEPGEAIGL 247 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGR 295 NT L T VLD+ I+D+S E H+PD L I YT + G Sbjct: 248 NTGYLVTKVLDVCGEHGECAILDTSAECHMPDVLEMPYRPEIIGAGKAGEKAYTYRLGGP 307 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGD+ GE+ F++P+K GD + F D++ Y++ + N FNGIN+P+I I ++ Sbjct: 308 TCLAGDVVGEYSFDEPLKEGDILVFCDMSHYSMVKNNTFNGINLPSIVAYTEKEGIVIVK 367 Query: 356 EFSYNDYYNNLS 367 +F Y D+ LS Sbjct: 368 QFGYEDFKMRLS 379 >gi|148263055|ref|YP_001229761.1| carboxynorspermidine decarboxylase [Geobacter uraniireducens Rf4] gi|146396555|gb|ABQ25188.1| carboxynorspermidine decarboxylase [Geobacter uraniireducens Rf4] Length = 384 Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats. Identities = 130/372 (34%), Positives = 206/372 (55%), Gaps = 8/372 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D +L +NL ++K +G K+LLALK F+ W +F + + + G +SS +E Sbjct: 14 PSPAYVVDLGRLRHNLAILDEVQKRSGAKILLALKAFSMWSVFPIIRETLQGVCASSPWE 73 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120 LG E+FG E H+++ A+K+ ++ +L + ++FN+ +QL +F+ +K H + +GL Sbjct: 74 ARLGREEFGREVHSFSAAFKESDVVDLLETSNHLVFNSFAQLERFRPLWEKEHGRVSVGL 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP + + DP P SRLG + + + V+GL FH CE F + Sbjct: 134 RVNPEHAEGHTAIYDPCAPKSRLGIRRAEFEGRSLSGVDGLHFHTLCEQL-FEPLERTAR 192 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 E++FG F+ + W++LGGG H T + Y + ++ F EKY +++YLEPGEAI Sbjct: 193 VFEEKFGEFLHGMRWLNLGGGHHITREGYDIDALVDLVRYFREKYDIEVYLEPGEAIAIG 252 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L VLD+ N + I+D S H+PD L I T + G S Sbjct: 253 TGILVAEVLDVVHNEMEIAILDVSATCHMPDILEMPYRPEIEGGFAAGEKACTYRLGGPS 312 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355 CLAGD+ G++ FE P+K GDR++F D+A Y + + FNGI+ P I G ++ +R Sbjct: 313 CLAGDVIGDWSFEAPLKAGDRLAFLDMAHYTMVKTTTFNGIHHPHICTFEPQTGELRIVR 372 Query: 356 EFSYNDYYNNLS 367 F+Y D+ N LS Sbjct: 373 SFTYEDFRNRLS 384 >gi|240145064|ref|ZP_04743665.1| carboxynorspermidine decarboxylase [Roseburia intestinalis L1-82] gi|257202890|gb|EEV01175.1| carboxynorspermidine decarboxylase [Roseburia intestinalis L1-82] gi|291535389|emb|CBL08501.1| carboxynorspermidine decarboxylase [Roseburia intestinalis M50/1] Length = 377 Score = 282 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 131/373 (35%), Positives = 212/373 (56%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y++D++KL NL + + G +LLA K F+ + ++ + QY+ GTT+S ++ Sbjct: 6 IPTPCYVVDEKKLKQNLKILQNLEQETGCHVLLAQKAFSMFSLYPLIGQYISGTTASGIF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119 E LG E+ G E H + AYK+ +++ ++ CD +IFN+ +Q K++ Q+ G Sbjct: 66 EARLGKEEMGKENHVFAPAYKEKDMEELVQICDHVIFNSFAQYEKYQHYFLQQECTASAG 125 Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 +R+NP S + DP P SRLG + + + + GL FH CE + Sbjct: 126 IRVNPECSTQEGHEIYDPCGPGSRLGVVKSEFPDQLPEGIEGLHFHTLCEQNADD-LITT 184 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 E++FG ++ Q++W++LGGG H T DY + + + + E KY+V++YLEPGEAI Sbjct: 185 WHAFEEKFGSYLKQVKWLNLGGGHHITRADYQLDELKKLICEIRRKYNVRVYLEPGEAIA 244 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCG 294 N L T V+DI N +++I+D+S H+PD L + P P+T + Sbjct: 245 LNAGYLVTEVMDIVHNGMDILILDASAACHMPDVLEMPYRPPLKDGYLPGEKPHTCRLSS 304 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +CLAGD+ G++ F + ++GDR+ FED+A Y++ + N FNG+ +P IAV DG ++ I Sbjct: 305 MTCLAGDVIGDYSFAQKKQVGDRLVFEDMAIYSMVKNNTFNGMPLPGIAVLREDGDVEMI 364 Query: 355 REFSYNDYYNNLS 367 +EF Y D+ LS Sbjct: 365 KEFGYEDFKGRLS 377 >gi|237735244|ref|ZP_04565725.1| carboxynorspermidine decarboxylase [Mollicutes bacterium D7] gi|229380989|gb|EEO31080.1| carboxynorspermidine decarboxylase [Coprobacillus sp. D7] Length = 369 Score = 282 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 142/371 (38%), Positives = 230/371 (61%), Gaps = 7/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPYYLID+Q L NL +++ G K+LLA KCF+ + ++ + +Y+DGTT+S LY Sbjct: 1 MKTPYYLIDEQLLEKNLKILHTVKERTGCKILLAQKCFSMFSVYPLIAEYLDGTTASGLY 60 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG+E+ E H ++ AY+D EI+ +++ CD ++FN+ +Q K+++ A++ G+R Sbjct: 61 EAKLGYEEMHKENHVFSTAYRDDEIEEIMNICDHVVFNSFNQWQKYQNLAKQTSTSCGIR 120 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S + DP FSR+G ++ E ++ + GL FH CE S ++ Sbjct: 121 INPECSTQIGHEIYDPCAKFSRMGVTLENFKEELLEGIEGLHFHTLCEQNSDD-LITTIR 179 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ Q++W++ GGG H T KDY ++ + + E EKY VQ+YLEPGEA+ N Sbjct: 180 AVEEKFGKYLGQMKWLNFGGGHHITRKDYDLEKLIKIINEIKEKYQVQVYLEPGEAVALN 239 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296 L ++VLDI+ N + I+D+S H+PD L I PN YT + G + Sbjct: 240 AGFLVSSVLDITHNGMAIAIMDTSAACHMPDVLEMPYRPEIIDSALPNVKTYTYRLGGPT 299 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGDI G++ F++P+++G ++ F+D+A Y++ + N FNG+N+P+I + +K I+E Sbjct: 300 CLAGDIIGDYSFDQPLQVGQQLWFKDMAIYSMVKNNTFNGMNLPSIVL-KQKEKLKIIKE 358 Query: 357 FSYNDYYNNLS 367 F+Y D+ N LS Sbjct: 359 FNYCDFKNRLS 369 >gi|306829507|ref|ZP_07462697.1| carboxynorspermidine decarboxylase [Streptococcus mitis ATCC 6249] gi|304428593|gb|EFM31683.1| carboxynorspermidine decarboxylase [Streptococcus mitis ATCC 6249] Length = 375 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 136/371 (36%), Positives = 205/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + + +GLR Sbjct: 66 EAKLAREEFSGEVHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGPRCRAAGISVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S L DP P SR G + V+GL FH CE S LK Sbjct: 126 INPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLDLVDGLHFHTLCEQGSDD-LETTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E +FG ++ Q++W+++GGG H T +DY V +K E Y++++Y+EPGEAI N Sbjct: 185 AVEAQFGPYLHQVKWLNMGGGHHITREDYDVDLLISEIKRIRETYNLEVYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI N ++++D+S H+PD L + P+T + + Sbjct: 245 AGYLATEVLDIVANEIEVLVLDASATCHMPDVLEMPYRPPLRNGFEAQEKPHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ FED+A Y+ + N FNGI +P++ + N G ++ Sbjct: 305 CLTGDVIGDYSFENPVEIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMNEQGDCSLVKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKERLS 375 >gi|322387825|ref|ZP_08061433.1| carboxynorspermidine decarboxylase [Streptococcus infantis ATCC 700779] gi|321141327|gb|EFX36824.1| carboxynorspermidine decarboxylase [Streptococcus infantis ATCC 700779] Length = 375 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 136/371 (36%), Positives = 205/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N +++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPSYIIDLGKLEENCRILQEVQEKAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+K+ +++ +L D I FN+ QL K+ + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKESDMEELLQISDHIDFNSERQLRKYGHRCREAGISVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 INPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E +FG ++ Q++W+++GGG H T DY V +K E Y+V +Y+EPGEAI N Sbjct: 185 AVEDQFGAYLHQVKWLNMGGGHHITRDDYDVYLLISEIKRIRETYNVDVYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN +++D+S H+PD L + PYT + + Sbjct: 245 AGYLATEVLDIVENGIETLVLDASASCHMPDVLEMPYRPPLRDGFEAQEKPYTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GDI G++ FEKP++IGDR+ FED+A Y+ + N FNGI +P++ + + +G ++ Sbjct: 305 CLTGDIIGDYSFEKPIEIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDKEGECSLVKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKERLS 375 >gi|253699937|ref|YP_003021126.1| carboxynorspermidine decarboxylase [Geobacter sp. M21] gi|251774787|gb|ACT17368.1| carboxynorspermidine decarboxylase [Geobacter sp. M21] Length = 384 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 123/372 (33%), Positives = 208/372 (55%), Gaps = 8/372 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D +L +NL +++ +G K+LLALK F+ W +F + + + G +SS +E Sbjct: 14 PSPSYVVDLGRLRHNLAILDEVQQKSGAKILLALKAFSMWSVFPIIAETLHGVCASSPWE 73 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 LG E+FGGE H+++ A+K+ ++ +LS + ++FN+ +QL +F+ ++ +GL Sbjct: 74 ARLGMEEFGGEVHSFSAAFKESDVVELLSTSNHLVFNSFNQLERFRPLWERHAGKVSVGL 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + DP P SRLG + ++ V GL FH CE F + Sbjct: 134 RVNPGHSEGHTPIYDPAAPKSRLGILRSEFEGKSLQGVEGLHFHTLCEQL-FEPLERTAR 192 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 E++FG F+ +++W++LGGG H T + Y V + ++ F EKY +++YLEPGEAI Sbjct: 193 AFEEKFGEFLPRMKWLNLGGGHHITREGYDVDALIELVRYFREKYDLEVYLEPGEAIAIG 252 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L + VLD+ N ++ ++D S H+PD L I + + G S Sbjct: 253 TGILVSEVLDVVHNEVDIAVLDVSATCHMPDILEMPYRPEILGGYDAGEKAHDYRLGGPS 312 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355 CLAGD+ G++ F+ P+ +G++++F D++ Y + + FNGI P I G ++ +R Sbjct: 313 CLAGDVIGDWSFDHPLAVGEKLAFLDMSHYTMVKTTTFNGIQHPHICTFEPQTGELEVVR 372 Query: 356 EFSYNDYYNNLS 367 F Y D+ + LS Sbjct: 373 SFGYQDFKSRLS 384 >gi|315613156|ref|ZP_07888066.1| carboxynorspermidine decarboxylase [Streptococcus sanguinis ATCC 49296] gi|315314718|gb|EFU62760.1| carboxynorspermidine decarboxylase [Streptococcus sanguinis ATCC 49296] Length = 375 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 208/371 (56%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGARCREAGISVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGNHALYDPCAPGSRFGVSLDKIPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T +DY V +K + Y++++Y+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREDYDVDLLISEIKRIRDTYNLEVYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN +++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMDILVLDASATCHMPDVLEMPYRPPLRNGFEPQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE P++IGDR+ FED+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPIQIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLVKT 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|253581175|ref|ZP_04858433.1| carboxynorspermidine decarboxylase [Ruminococcus sp. 5_1_39B_FAA] gi|251847532|gb|EES75504.1| carboxynorspermidine decarboxylase [Ruminococcus sp. 5_1_39BFAA] Length = 373 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 136/371 (36%), Positives = 221/371 (59%), Gaps = 8/371 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP Y+ID++K+ NL+ ++++ G K+LLA K F+ + ++ + +Y+ GTT+S L+ Sbjct: 6 LQTPCYVIDEKKMRENLEILKKVQEDTGCKILLAQKAFSGFALYPMIGKYLAGTTASGLF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG+E+ G E H ++ AY+ +I+ + CD IIFN+ +QL KFK+ +GLR Sbjct: 66 EARLGYEEMGKENHVFSPAYRTEDIEELDRICDHIIFNSTAQLKKFKEVCTGAS--LGLR 123 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S + DP P SRLG ++ +K ++GL FH CE + L+ Sbjct: 124 INPECSTQGDHAIYDPCAPGSRLGVTRENFDGECLKWIDGLHFHTLCEQNADD-LEKTLQ 182 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG F++++ W+++GGG H T +DY VK + ++ E Y + IYLEPGEA+ N Sbjct: 183 AVEEKFGEFLSEVSWLNMGGGHHITREDYNVKLLEKCIQHMKETYDLDIYLEPGEAVALN 242 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296 L T V+DI EN +I+D+S H+PD L + + YT + + Sbjct: 243 AGYLVTEVMDIVENEIRTLILDASAACHMPDVLEMPYRPPLKDSGEAGEKAYTYRLSSCT 302 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ G++ F++ ++IGD++ F D+A Y++ + N FNG+ +P IAV + DG + IR Sbjct: 303 CLAGDVIGDYSFDREIQIGDKLYFMDMAIYSMVKNNTFNGMPLPDIAVMHEDGECEVIRH 362 Query: 357 FSYNDYYNNLS 367 F Y D+ + LS Sbjct: 363 FGYEDFKSRLS 373 >gi|291520960|emb|CBK79253.1| carboxynorspermidine decarboxylase [Coprococcus catus GD/7] Length = 374 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 131/370 (35%), Positives = 212/370 (57%), Gaps = 6/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D+ ++ +NL+ + K+ G +LLA K F+ + ++ + +Y+ GTT+S LY Sbjct: 6 LPTPCYVVDEGRIRHNLEILQQLEKDTGCHVLLAQKAFSMYSLYPMIGRYISGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG+E+ G E H + AYK+ ++ +++ CD IIFN+ +Q K+KD Q +G+R Sbjct: 66 EARLGYEEMGKENHVFAPAYKEADMQELVTICDHIIFNSFAQYEKYKDICQAKGVSVGIR 125 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S + DP SRLG E + + GL FH CE + + Sbjct: 126 VNPQCSTQEGHDIYDPCGYASRLGVTKAQFPEVLPEGIEGLHFHTLCEQNADD-LVTTFQ 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 E++FG ++ I+W++LGGG H T KDY + + ++ + Y + +YLEPGEA+ N Sbjct: 185 AFEEKFGKYLHCIKWLNLGGGHHITRKDYQYETLVKLIRYIRDTYHMTVYLEPGEAVALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296 + T V+DI N +++I+D S H+PD L + N PYT + + Sbjct: 245 AGYMVTEVMDIVHNDMDILILDVSAACHMPDVLEMPYRPPLSGGYEANQKPYTYRLSSMT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ G++ FEKPV+IGDR+ FED+A Y++ + N FNG+ +P IA+ +G + +R+ Sbjct: 305 CLAGDVIGDYSFEKPVQIGDRLVFEDMAIYSMVKNNTFNGMPLPGIALLRENGNTEMVRK 364 Query: 357 FSYNDYYNNL 366 F Y D+ L Sbjct: 365 FGYQDFKMRL 374 >gi|258544778|ref|ZP_05705012.1| carboxynorspermidine decarboxylase [Cardiobacterium hominis ATCC 15826] gi|258519987|gb|EEV88846.1| carboxynorspermidine decarboxylase [Cardiobacterium hominis ATCC 15826] Length = 389 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 128/375 (34%), Positives = 206/375 (54%), Gaps = 10/375 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D+ L NL +++ +G K+LLALK FA + +++Y+ G +S L+ Sbjct: 16 LPTPCYVVDEALLERNLQLLAHVQAESGAKVLLALKGFAMFHFAPLISRYLSGVCASGLH 75 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK----DKAQKLHKK 117 E LG E F GE H ++ AY ++D VL+ D +IFN+ +Q +F+ A++ Sbjct: 76 EAKLGREFFSGEVHTFSAAYPPADMDEVLALSDHVIFNSCNQWERFRAQALAAAKRKPLH 135 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 GLRINP S + DP+ P SRLG + + GL FHN CE Sbjct: 136 FGLRINPQQSEGAVAIYDPSAPGSRLGVIRGQLRPESLTGITGLHFHNLCEQD-VAPLRR 194 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 L +E++FG + Q++W++ GGG H T + Y V++ ++ F E++ V++++EPGEA+ Sbjct: 195 TLAAVERQFGDILPQMQWVNFGGGHHVTREGYAVEELIALIRAFRERWGVEVFIEPGEAV 254 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVC 293 T T VLD+ N N+ ++D S AH+PD L + P+ PYT + Sbjct: 255 ALGTGVYVTEVLDVIWNHLNIAVIDGSCTAHLPDVLEMPYRPDVLGGAMPHERPYTYRIG 314 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV-DGTIK 352 G +CLAGDI G++ F +P+++G R+ F D++ Y + + N FNG+ +P I + + Sbjct: 315 GLTCLAGDIIGDYSFAEPLEVGKRLMFMDMSHYTMVKTNTFNGVKLPAIVAWDSRTDALT 374 Query: 353 AIREFSYNDYYNNLS 367 +REF Y D+ LS Sbjct: 375 TVREFGYEDFKMRLS 389 >gi|322374305|ref|ZP_08048819.1| carboxynorspermidine decarboxylase [Streptococcus sp. C300] gi|321279805|gb|EFX56844.1| carboxynorspermidine decarboxylase [Streptococcus sp. C300] Length = 375 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 131/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N +++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEENCRILQQVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGARCREAGISVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVSLDKVPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E +FG ++ +++W+++GGG H T +DY V +K E Y++++Y+EPGEAI N Sbjct: 185 AVEAQFGPYLHEVKWLNMGGGHHITREDYDVDLLISEIKRIRETYNLEVYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ FED+A Y+ + N FNGI +P++ + + G +++ Sbjct: 305 CLTGDVIGDYSFENPVEIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDEQGECNLVKD 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|119385681|ref|YP_916736.1| carboxynorspermidine decarboxylase [Paracoccus denitrificans PD1222] gi|119376276|gb|ABL71040.1| carboxynorspermidine decarboxylase [Paracoccus denitrificans PD1222] Length = 368 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 188/366 (51%), Positives = 260/366 (71%), Gaps = 1/366 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPYYLID +L N++ Y+R+ +G K LLALKCFA W FD + +MDGTTSSSL+ Sbjct: 4 LQTPYYLIDLARLRENMERIRYLRERSGAKCLLALKCFATWSAFDFMRDFMDGTTSSSLF 63 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+ LGHE+FG ETHAY+VA+ D EID L D IIFN++ QL++F +A + +GLR Sbjct: 64 ELRLGHEEFGKETHAYSVAWADHEIDEALGYADKIIFNSLGQLDRFGARAAQRGIAMGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S S F LADP RPFSRLGE +++E + ++G+M H NCEN F F A L Sbjct: 124 LNPRFSTSGFDLADPARPFSRLGEWDLNRLEQALDRISGVMIHYNCENADFELFDAQLAR 183 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE EFG F+ +++W+SLGGGIHFT + YP+ RL+ FSE++ VQ++LEPGEA +T + Sbjct: 184 IETEFGGFLERLDWVSLGGGIHFTGEGYPLDRLADRLRAFSERFGVQVFLEPGEASITRS 243 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 T+L TVLD+ + K++ IVDSS+EAH+ D L+Y+E+A P G + + G++CLAGD Sbjct: 244 TSLEVTVLDVIHHGKDVAIVDSSIEAHMLDLLIYRETAK-LPQDGEHPWQIAGKTCLAGD 302 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 IFGE F +P+K+GDR+S D GY + +KNWFNG+ MP IA+++ DGTI +R F+Y+D Sbjct: 303 IFGEGRFAQPLKVGDRLSIADAGGYTMVKKNWFNGVPMPAIAIRDEDGTIHEVRRFTYDD 362 Query: 362 YYNNLS 367 Y +LS Sbjct: 363 YKASLS 368 >gi|322391913|ref|ZP_08065378.1| carboxynorspermidine decarboxylase [Streptococcus peroris ATCC 700780] gi|321145393|gb|EFX40789.1| carboxynorspermidine decarboxylase [Streptococcus peroris ATCC 700780] Length = 375 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 133/371 (35%), Positives = 203/371 (54%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N +++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEENCSILHQVQEKAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+K+ +++ +L D I+FN+ QL K+ + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKEADMEELLQISDHIVFNSERQLRKYGQRCREAGISVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G ++ V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLELVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E +FG ++ Q++W+++GGG H T DY V +K E Y + +Y+EPGEAI N Sbjct: 185 AVEDQFGAYLHQVKWLNMGGGHHITRDDYDVDLLISEIKRIRETYDLDVYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN +++D+S H+PD L + YT + + Sbjct: 245 AGYLATEVLDIVENGIETLVLDASASCHMPDVLEMPYRPPLRNGFEAQEKAYTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GDI G++ FE PV IGDR+ FED+A Y+ + N FNGI +P++ + + +G ++ Sbjct: 305 CLTGDIIGDYSFENPVNIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDKEGECSLVKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKERLS 375 >gi|268612016|ref|ZP_06145743.1| carboxynorspermidine decarboxylase [Ruminococcus flavefaciens FD-1] Length = 378 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 139/370 (37%), Positives = 220/370 (59%), Gaps = 6/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID+ +L++NL+ + G K+LLA K F+ + ++ + +Y+ GT S L+ Sbjct: 10 LPTPCYIIDEARLIHNLEILKGVEDRTGAKILLAQKAFSCYHVYPLIAEYISGTACSGLF 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG+E+ G E H ++ AY++ EID ++S C IIFN+ SQL++++D+ KK+GLR Sbjct: 70 EAKLGYEEMGKENHVFSAAYRESEIDEIISYCGHIIFNSFSQLDRYRDRVLAAGKKVGLR 129 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S + DP P SRLG ++ ++ V+GL FH CE S + L Sbjct: 130 INPEYSTQEGHEIYDPCSPASRLGITRRNFRADDLDGVSGLHFHTLCEQNSDD-LESTLN 188 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE++FG + ++EWI+ GGG H T DY + + +K EKY ++++LEPGEA+ N Sbjct: 189 AIEEKFGDILPKMEWINFGGGHHITRDDYDIPRLERCIKRMQEKYGLEVFLEPGEAVALN 248 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296 L T VLD++EN + I+D+S H+PD L + + +T + ++ Sbjct: 249 AGWLVTEVLDLTENDMPIAILDTSAACHMPDVLEMPYRPPLVDSGKAGEKEFTYRLGSQT 308 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD GE+ F+KP+ IGDR+ F D+A Y++ + N FNG+ +P I + DGT + +R+ Sbjct: 309 CLAGDSIGEYSFDKPLNIGDRLVFGDMAIYSMVKNNTFNGMPLPEIILMKKDGTFRQLRK 368 Query: 357 FSYNDYYNNL 366 F Y+D+ L Sbjct: 369 FGYSDFRERL 378 >gi|260887132|ref|ZP_05898395.1| carboxynorspermidine decarboxylase [Selenomonas sputigena ATCC 35185] gi|330839096|ref|YP_004413676.1| carboxynorspermidine decarboxylase [Selenomonas sputigena ATCC 35185] gi|260863194|gb|EEX77694.1| carboxynorspermidine decarboxylase [Selenomonas sputigena ATCC 35185] gi|329746860|gb|AEC00217.1| carboxynorspermidine decarboxylase [Selenomonas sputigena ATCC 35185] Length = 387 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 119/371 (32%), Positives = 195/371 (52%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++ + L NL +++ G +LLA K F+ + + + +Y+ G+ +S L+ Sbjct: 18 VPTPAYVVMEDLLRRNLTVLRDLQQETGAHVLLAQKAFSMFHFYPLIAEYLAGSAASGLF 77 Query: 62 EVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E L +E+ G E H ++ A+K+ ++ ++ D I+FN+ +Q K+ + A K GL Sbjct: 78 EARLAYEEMKGKENHVFSPAFKEADMAEIVKIADHIVFNSFAQWEKYGEFALKHGCACGL 137 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 RINP S + + DP SRLG K D +++ + GL FH CE + L+ Sbjct: 138 RINPEYSTQEHAIYDPCSAGSRLGVKLGDFRPDKMEGLTGLHFHTLCEQG-AGPLAETLE 196 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ Q+EWI+ GGG H T +DY + Q + KY +++Y+EPGEAI + Sbjct: 197 AVEEKFGAWLPQMEWINFGGGHHITREDYDIDLLKQCIMRMQTKYGLKVYIEPGEAIALD 256 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L VL+I EN + I+D+S H+PD + + P+ G + Sbjct: 257 AGFLVAEVLEIVENDTPVAILDTSAACHMPDVIEMPYRPPVLGAGEAGEKPFAYTFAGPT 316 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD G + F+ P+ RI F D+A Y + + N FNG+ +P I + G + +R Sbjct: 317 CLAGDTIGTYSFDAPLAASRRIVFGDMAIYTMVKNNTFNGMPLPAIVAVDETGAWQVVRR 376 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 377 FGYEDFKMRLS 387 >gi|152995410|ref|YP_001340245.1| carboxynorspermidine decarboxylase [Marinomonas sp. MWYL1] gi|150836334|gb|ABR70310.1| carboxynorspermidine decarboxylase [Marinomonas sp. MWYL1] Length = 365 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 219/367 (59%), Positives = 278/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDK LL NL+ Y+R+ +G K LLALKCFA W +FD + YMDGTTSSSL Sbjct: 1 MIKTPYYLIDKAALLKNLEKIAYVRQQSGAKSLLALKCFATWSVFDLMQDYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YEV LG KF GETHAY+VAY D EI VL + D IIFN++ Q N+FKD + K GL Sbjct: 61 YEVKLGKTKFNGETHAYSVAYSDDEIAEVLDHSDKIIFNSIGQFNRFKDVS--KDKTRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S+F++ADP RPFSRLGE +KI + I +++G MFHNNCEN SF F ML Sbjct: 119 RVNPQVSTSEFLIADPARPFSRLGEWDPEKIATVINDISGFMFHNNCENNSFERFDEMLN 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+ FGH I Q++W+SLGGGIHFT + YP+ FCQRLK F+EKY +Q+YLEPGEA +T Sbjct: 179 LIEERFGHLIQQVKWVSLGGGIHFTGEGYPIDKFCQRLKSFAEKYDIQVYLEPGEASITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL TVLD N KNL +VDSS+EAH+ D L+Y+E+A + P G + M+CG+SCLAG Sbjct: 239 STTLEVTVLDTLFNGKNLAVVDSSIEAHMLDLLIYRENAKMAPCDGEHEYMICGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+K +++GDR+SF+D AGY + +KNWFNG+ MP+IA++ +DG+I+ +REF YN Sbjct: 299 DIFGEFKFDKALQVGDRLSFQDAAGYTMVKKNWFNGVKMPSIAIRQLDGSIELVREFDYN 358 Query: 361 DYYNNLS 367 D+ NLS Sbjct: 359 DFEQNLS 365 >gi|167755031|ref|ZP_02427158.1| hypothetical protein CLORAM_00535 [Clostridium ramosum DSM 1402] gi|167705081|gb|EDS19660.1| hypothetical protein CLORAM_00535 [Clostridium ramosum DSM 1402] Length = 369 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 142/371 (38%), Positives = 229/371 (61%), Gaps = 7/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPYYLID+Q L NL +++ G K+LLA KCF+ + ++ + +Y+DGTT+S LY Sbjct: 1 MKTPYYLIDEQLLEKNLKILYTVKERTGCKILLAQKCFSMFSVYPLIAEYLDGTTASGLY 60 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG+E+ E H ++ AY+D EI+ +++ CD ++FN+ +Q K+++ A++ G+R Sbjct: 61 EAKLGYEEMHKENHVFSTAYRDDEIEEIMNICDHVVFNSFNQWQKYQNLAKQTSTSCGIR 120 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S + DP FSR+G ++ E ++ + GL FH CE S ++ Sbjct: 121 INPECSTQIGHEIYDPCAKFSRMGVTLENFKEELLEGIEGLHFHTLCEQNSDD-LITTIR 179 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ Q++W++ GGG H T KDY ++ + + E EKY VQ+YLEPGEA+ N Sbjct: 180 AVEEKFGKYLGQMKWLNFGGGHHITRKDYDLEKLIKIINEIKEKYQVQVYLEPGEAVALN 239 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296 L ++VLDI N + I+D+S H+PD L I PN YT + G + Sbjct: 240 AGFLVSSVLDIIHNGMAIAIMDTSAACHMPDVLEMPYRPEIIDSALPNVKTYTYRLGGPT 299 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGDI G++ F++P+++G ++ F+D+A Y++ + N FNG+N+P+I + +K I+E Sbjct: 300 CLAGDIIGDYSFDQPLQVGQQLWFKDMAIYSMVKNNTFNGMNLPSIVL-KQKEKLKIIKE 358 Query: 357 FSYNDYYNNLS 367 F+Y D+ N LS Sbjct: 359 FNYCDFKNRLS 369 >gi|85712875|ref|ZP_01043917.1| Carboxynorspermidine decarboxylase [Idiomarina baltica OS145] gi|85693339|gb|EAQ31295.1| Carboxynorspermidine decarboxylase [Idiomarina baltica OS145] Length = 380 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 133/370 (35%), Positives = 206/370 (55%), Gaps = 5/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y++D+ L NNL+ ++ +G ++LALK ++ W F + QY+ G T+SS++ Sbjct: 12 IPSPCYVLDEALLRNNLELMKRVQVESGASIILALKGYSMWSAFPLIKQYLKGCTASSVW 71 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L +KFG E HAY AYK +I +L + I FN++SQ + D+A+ +GLR Sbjct: 72 EAQLAADKFGSEVHAYAPAYKAEDIKQLLPIVNHISFNSISQWEAYADQAKAAGVSVGLR 131 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP + L DP+ P SRLG + + + +V G+ HN CE S+ L Sbjct: 132 VNPEHQEADTELYDPSAPGSRLGVRASELENVSLDDVEGIHVHNLCECDSYA-LERTLAA 190 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E +FG + Q++W++LGGG T + Y V +L+ Y++ I LEPG A+ T Sbjct: 191 VENKFGDLLHQVKWLNLGGGHLMTREGYDVDHLISQLQRLKATYNLDIILEPGSAVAWQT 250 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRSC 297 L V+DI EN ++ ++D S AH+PD L I P PY + G SC Sbjct: 251 GPLVCEVVDIVENQGSIALLDISATAHMPDVLEMPYRPHIEGAGLPADKPYRYRLGGNSC 310 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 LAGD+ GE+ F++P+K GDR+ F D+ Y + + +FNG+ P I + DG+ + IR F Sbjct: 311 LAGDVIGEYSFDEPLKPGDRLVFADMMHYTMVKTTFFNGVQHPDIGILREDGSFERIRHF 370 Query: 358 SYNDYYNNLS 367 +Y D+ + LS Sbjct: 371 TYEDFRSRLS 380 >gi|331266385|ref|YP_004326015.1| LysA-like decarboxylase, diaminopimelate decarboxylase putative [Streptococcus oralis Uo5] gi|326683057|emb|CBZ00674.1| LysA-like decarboxylase, diaminopimelate decarboxylase putative [Streptococcus oralis Uo5] Length = 375 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 207/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N +++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLGKLEANCRILQQVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+K+ +++ +L D I+FN+ QL K+ + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKESDMEELLQISDHIVFNSERQLRKYGSRCREAGISVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E +FG ++ +++W+++GGG H T +DY V +K E Y++++Y+EPGEAI N Sbjct: 185 AVEAQFGPYLYKVKWLNMGGGHHITREDYDVDLLISEIKRIRETYNLEVYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE P++IGDR+ FED+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPIQIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDERGDCSLVKA 364 Query: 357 FSYNDYYNNLS 367 FSY D+ LS Sbjct: 365 FSYQDFKGRLS 375 >gi|148988355|ref|ZP_01819802.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP6-BS73] gi|147926036|gb|EDK77110.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP6-BS73] Length = 375 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|292670643|ref|ZP_06604069.1| carboxynorspermidine decarboxylase [Selenomonas noxia ATCC 43541] gi|292647809|gb|EFF65781.1| carboxynorspermidine decarboxylase [Selenomonas noxia ATCC 43541] Length = 381 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 122/369 (33%), Positives = 191/369 (51%), Gaps = 7/369 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP YL+ ++ L NL I ++ G K+LLA KCF+ + + + +Y+ GTT+S +Y Sbjct: 16 VPTPSYLVYEELLEKNLKILAGIAEDTGAKVLLAQKCFSMYHYYPLIGKYLSGTTASGIY 75 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+ G E H + AY EI + CD IIFN+ +Q +F A+ G+R Sbjct: 76 EARLSQEEMGKENHVFKPAYDAEEIRQLAQICDHIIFNSFAQWARFGRAARAQGASCGIR 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + + DP P SRLG K D E ++ + GL FH CE L Sbjct: 136 INPECSTQEHAIYDPCAPGSRLGVKLADFREDLLEGIEGLHFHTLCEQG-ADALEVTLAA 194 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E++FG ++ ++W++ GGG H T +DY + + ++ E Y +YLEPGEA N Sbjct: 195 VEEKFGKYLHGMKWLNFGGGHHITREDYDIPLLKKLIRHVQETYDTAVYLEPGEAAALNA 254 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSC 297 L VL++ ++ ++S H+PD + + +T G +C Sbjct: 255 GVLVAEVLEVQTGGNVIL--NTSATCHMPDVIEMPYRPPVVHAGEAGEKTHTYTFAGPTC 312 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 LAGD G + F+ P+ +GDR+ F D+A Y + + N FNG+ +P I + G + +R F Sbjct: 313 LAGDTIGTYSFDTPLSVGDRVVFGDMAIYTMVKNNTFNGMPLPNIIAVSPSGAWEIVRAF 372 Query: 358 SYNDYYNNL 366 SY+D+ L Sbjct: 373 SYDDFKMRL 381 >gi|197119289|ref|YP_002139716.1| carboxynorspermidine/carboxyspermidine decarboxylase [Geobacter bemidjiensis Bem] gi|197088649|gb|ACH39920.1| carboxynorspermidine/carboxyspermidine decarboxylase [Geobacter bemidjiensis Bem] Length = 384 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 124/372 (33%), Positives = 208/372 (55%), Gaps = 8/372 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D +L +NL ++K +G K+LLALK F+ W +F + + G +SS +E Sbjct: 14 PSPSYVVDLGRLRHNLAILNEVQKKSGAKILLALKAFSMWSVFPIIANTLHGVCASSPWE 73 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 LG E+FGGE H+++ A+K+ ++ +L+ + ++FN+ +QL +F+ ++ +GL Sbjct: 74 ARLGMEEFGGEVHSFSAAFKESDVVELLTTSNHLVFNSFNQLERFRPLWEQYAGKVSVGL 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + DP P SRLG + + ++ V GL FH CE F + Sbjct: 134 RVNPGHSEGHTPIYDPAAPKSRLGILRSEFDDKSLQGVEGLHFHTLCEQL-FEPLERTAR 192 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 E++FG F+ +++W++LGGG H T + Y V + ++ F EKY +++YLEPGEAI Sbjct: 193 VFEEQFGEFLPRMKWLNLGGGHHITREGYDVDALIKLVRYFREKYDLEVYLEPGEAIAIG 252 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L + VLD+ N ++ ++D S H+PD L I + + G S Sbjct: 253 TGILVSEVLDVVHNEVDIAVLDVSATCHMPDILEMPYRPEILGGYDAGEKAHDYRLGGPS 312 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355 CLAGD+ G++ F+ P+ +G++++F D++ Y + + FNGI P I G +K +R Sbjct: 313 CLAGDVIGDWSFDHPLAVGEKLAFLDMSHYTMVKTTTFNGIQHPHICTFEPQTGELKVVR 372 Query: 356 EFSYNDYYNNLS 367 F Y D+ + LS Sbjct: 373 SFGYQDFKSRLS 384 >gi|148996988|ref|ZP_01824642.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP11-BS70] gi|168575583|ref|ZP_02721519.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae MLV-016] gi|194397835|ref|YP_002037557.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae G54] gi|307067577|ref|YP_003876543.1| diaminopimelate decarboxylase [Streptococcus pneumoniae AP200] gi|147756688|gb|EDK63728.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP11-BS70] gi|183578480|gb|EDT99008.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae MLV-016] gi|194357502|gb|ACF55950.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae G54] gi|306409114|gb|ADM84541.1| Diaminopimelate decarboxylase [Streptococcus pneumoniae AP200] Length = 375 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|90021243|ref|YP_527070.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Saccharophagus degradans 2-40] gi|89950843|gb|ABD80858.1| carboxynorspermidine decarboxylase [Saccharophagus degradans 2-40] Length = 387 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 135/376 (35%), Positives = 211/376 (56%), Gaps = 11/376 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++DK KL NL Y+++ +G K+LLALK F+ + + + +Y++G +S L Sbjct: 13 VPSPCYVVDKAKLEQNLRILDYVQQQSGAKVLLALKAFSMFSLAPLVMKYLNGVCASGLN 72 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QKLHK 116 E LG E+FG E H Y+ A++ E + +L+ D ++FN+ +Q +K + + H Sbjct: 73 EAKLGREEFGKEVHTYSAAFRPQEFEEILAVSDHLVFNSFNQWETYKARCLAAQQDRPHL 132 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + GLRINP S + + DP P SR+G K ++ ++GL FH CE F + Sbjct: 133 EFGLRINPEHSEGETPMYDPCAPCSRMGIPIKQFANKDLHGISGLHFHTLCEQD-FAPLA 191 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 L +E++FG + ++W++ GGG H T DY V +RL F KY VQ+YLEPGEA Sbjct: 192 RTLDAVEEKFGDILPSLKWVNFGGGHHITRADYQVDALIERLNAFQTKYDVQVYLEPGEA 251 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMV 292 I N + VLD N ++ I+D+S H+PD + I P +T + Sbjct: 252 IALNAGVFVSEVLDTLNNGMDIAILDASATCHMPDVIEMPYRPRITGAGEPGERNHTYRL 311 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV-DGTI 351 G SCLAGD+ G++ F P++IGDR++FED+A Y + + FNGIN+P+I V + + Sbjct: 312 GGPSCLAGDVIGDYSFSNPLQIGDRMTFEDMAIYTMVKNTTFNGINLPSICVWDSTTDEL 371 Query: 352 KAIREFSYNDYYNNLS 367 + I+ F Y D+ LS Sbjct: 372 EVIKNFGYEDFKQRLS 387 >gi|15900800|ref|NP_345404.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae TIGR4] gi|111658138|ref|ZP_01408836.1| hypothetical protein SpneT_02000704 [Streptococcus pneumoniae TIGR4] gi|149010437|ref|ZP_01831808.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP19-BS75] gi|14972394|gb|AAK75044.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae TIGR4] gi|147764918|gb|EDK71847.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP19-BS75] Length = 375 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDADLEELLEIMDHIVFNSERQLRKHGPRCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|322376666|ref|ZP_08051159.1| carboxynorspermidine decarboxylase [Streptococcus sp. M334] gi|321282473|gb|EFX59480.1| carboxynorspermidine decarboxylase [Streptococcus sp. M334] Length = 375 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 207/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVVDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDEDMEELLEITDHIVFNSERQLRKHGSRCREAGISVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVILDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ ++W+++GGG H T + Y V +K E Y++++Y+EPGEAI N Sbjct: 185 AVEEQFGSYLHHVKWLNMGGGHHITREGYDVDLLISEIKRIRETYNLEVYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGYEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ FED+A Y+ + N FNGI +P++ + + +G +++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYIMDENGDCDLVKD 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|148992947|ref|ZP_01822566.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP9-BS68] gi|168490263|ref|ZP_02714462.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP195] gi|147928399|gb|EDK79415.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP9-BS68] gi|183571393|gb|EDT91921.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP195] gi|332073252|gb|EGI83731.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA17570] Length = 375 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 EVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|15902865|ref|NP_358415.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae R6] gi|116515395|ref|YP_816296.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae D39] gi|168494349|ref|ZP_02718492.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC3059-06] gi|182683867|ref|YP_001835614.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CGSP14] gi|221231693|ref|YP_002510845.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae ATCC 700669] gi|303254985|ref|ZP_07341064.1| putative carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS455] gi|303259832|ref|ZP_07345807.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP-BS293] gi|303262246|ref|ZP_07348190.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP14-BS292] gi|303264668|ref|ZP_07350586.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS397] gi|303267169|ref|ZP_07353036.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS457] gi|303269417|ref|ZP_07355186.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS458] gi|15458422|gb|AAK99625.1| Carboxynorspermidine decarboxylase [Streptococcus pneumoniae R6] gi|116075971|gb|ABJ53691.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae D39] gi|182629201|gb|ACB90149.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CGSP14] gi|183575664|gb|EDT96192.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC3059-06] gi|220674153|emb|CAR68676.1| putative carboxynorspermidine decarboxylase [Streptococcus pneumoniae ATCC 700669] gi|301794065|emb|CBW36469.1| putative carboxynorspermidine decarboxylase [Streptococcus pneumoniae INV104] gi|301801767|emb|CBW34478.1| putative carboxynorspermidine decarboxylase [Streptococcus pneumoniae INV200] gi|302598065|gb|EFL65132.1| putative carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS455] gi|302636569|gb|EFL67060.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP14-BS292] gi|302639037|gb|EFL69497.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP-BS293] gi|302641036|gb|EFL71414.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS458] gi|302643284|gb|EFL73564.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS457] gi|302645755|gb|EFL75984.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS397] Length = 375 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGARCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|225856584|ref|YP_002738095.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae P1031] gi|225725236|gb|ACO21088.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae P1031] Length = 375 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDADLEELLEIMDHIVFNSERQLRKHGPRCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQG-VDDLQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L ++ +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPSLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|153007782|ref|YP_001368997.1| carboxynorspermidine decarboxylase [Ochrobactrum anthropi ATCC 49188] gi|151559670|gb|ABS13168.1| carboxynorspermidine decarboxylase [Ochrobactrum anthropi ATCC 49188] Length = 389 Score = 280 bits (715), Expect = 4e-73, Method: Composition-based stats. Identities = 227/367 (61%), Positives = 277/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 25 MIQTPYYLIDKTKLKRNMEKVAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 84 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHE+FGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA H K GL Sbjct: 85 NEVRLGHERFGGETHAYSVAYADNEIDEVISHADKIIFNSIGQLERFADKA--AHIKRGL 142 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + V G M HNNCEN F F ML Sbjct: 143 RLNPGVSSSTFDLADPARPFSRLGEWDVAKVEKVMDRVTGFMIHNNCENSDFGLFDKMLT 202 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + ++EW+SLGGGIHFT DYPV DFC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 203 DIEEKFGSLLHRVEWVSLGGGIHFTGDDYPVDDFCARLKAFSEKFGVQVYLEPGEASITK 262 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG Sbjct: 263 TTTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGEHSYMVCGKSCLAG 322 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+K + IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y Sbjct: 323 DIFGEFTFDKELSIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKIVREFDYA 382 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 383 DFEGSLS 389 >gi|168491008|ref|ZP_02715151.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC0288-04] gi|183574729|gb|EDT95257.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC0288-04] Length = 375 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDADLEELLGITDHIVFNSERQLRKHGARCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|307706572|ref|ZP_07643379.1| carboxynorspermidine decarboxylase [Streptococcus mitis SK321] gi|307618027|gb|EFN97187.1| carboxynorspermidine decarboxylase [Streptococcus mitis SK321] Length = 375 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 131/371 (35%), Positives = 203/371 (54%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + + +GLR Sbjct: 66 EAKLAREEFPGEIHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGARCRDAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G ++ V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLELVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E +FG ++ ++W+++GGG H + Y V +K E Y+++IY+EPGEAI N Sbjct: 185 AVEAQFGSYLHHVKWLNMGGGHHIIREGYDVDLLISEIKRIRETYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ FED+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLVKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|225854427|ref|YP_002735939.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae JJA] gi|225723651|gb|ACO19504.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae JJA] Length = 375 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 207/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGARCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L ++ +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPSLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|293365437|ref|ZP_06612146.1| carboxynorspermidine decarboxylase [Streptococcus oralis ATCC 35037] gi|307703392|ref|ZP_07640334.1| carboxynorspermidine decarboxylase [Streptococcus oralis ATCC 35037] gi|291315805|gb|EFE56249.1| carboxynorspermidine decarboxylase [Streptococcus oralis ATCC 35037] gi|307622799|gb|EFO01794.1| carboxynorspermidine decarboxylase [Streptococcus oralis ATCC 35037] Length = 375 Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats. Identities = 129/371 (34%), Positives = 202/371 (54%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N +++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEENCRILQQVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + + +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDVDMEELLEITDHIVFNSERQLRKHGPRCRDAGISVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E +FG ++ +++W+++GGG H T + Y V +K E Y +++Y+EPGEAI N Sbjct: 185 AVETQFGPYLHKVKWLNMGGGHHITIEGYDVDLLISEIKRIRETYHLEVYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFDAREKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGD++ FED+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDKLYFEDMAIYSFVKNNTFNGIGLPSLYLMDERGDCSLVKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|149019507|ref|ZP_01834826.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP23-BS72] gi|168485870|ref|ZP_02710378.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC1087-00] gi|147930882|gb|EDK81862.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP23-BS72] gi|183571011|gb|EDT91539.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC1087-00] gi|332204923|gb|EGJ18988.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA47901] Length = 375 Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDADLEELLGITDHIVFNSERQLRKHGARCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|254293186|ref|YP_003059209.1| carboxynorspermidine decarboxylase [Hirschia baltica ATCC 49814] gi|254041717|gb|ACT58512.1| carboxynorspermidine decarboxylase [Hirschia baltica ATCC 49814] Length = 391 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 144/377 (38%), Positives = 210/377 (55%), Gaps = 12/377 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP +++DK L NL ++ +G K+LLALK FA W T+ +Y+ G TSSS Sbjct: 16 IETPVFIVDKGALEENLAILKDVQDRSGAKILLALKGFAMWSFAPTIMKYLPGVTSSSTA 75 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---- 117 E LG E+FGGE HA AY + + +L+ CD I+FN+V+Q +F ++ Sbjct: 76 EARLGAEEFGGEVHACAPAYSEADFRELLTLCDHIVFNSVNQAKRFLPIYEEAKANGGRK 135 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 GLR+N ++ L DP P SRLG ++ + GL FH CE S Sbjct: 136 VSFGLRVNHGHRETEVELYDPAAPKSRLGAPRDQIPTDGLEGLEGLHFHTLCELDS-DSL 194 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 L+ E++FG I ++W++ GGG H T DY V+ +K EKY V++YLEPGE Sbjct: 195 ERSLEVFERDFGDLIPGLKWLNFGGGHHITRPDYDVERLVHLVKRIKEKYGVEVYLEPGE 254 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAM 291 AI T L T V+DI N ++ I+D+S AH+PD L I PN +T Sbjct: 255 AIAIRTGVLVTEVMDIMHNAMDIAILDTSATAHMPDVLEMPYRPDIVGGDEPNEKVHTYR 314 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GT 350 + G SCLAGD+ G++ F+KP++IG ++ F D+ Y + + + FNG+ +P+IA+ + D G Sbjct: 315 LGGLSCLAGDVVGDYSFDKPLEIGQKLIFLDMGHYTMVKTSTFNGVRLPSIAIADPDTGK 374 Query: 351 IKAIREFSYNDYYNNLS 367 I+ +R F Y DY N LS Sbjct: 375 IEIVRRFGYEDYKNRLS 391 >gi|168482990|ref|ZP_02707942.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC1873-00] gi|172043345|gb|EDT51391.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC1873-00] gi|332201385|gb|EGJ15455.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA47368] Length = 375 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 129/371 (34%), Positives = 205/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ G K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|224542281|ref|ZP_03682820.1| hypothetical protein CATMIT_01456 [Catenibacterium mitsuokai DSM 15897] gi|224524823|gb|EEF93928.1| hypothetical protein CATMIT_01456 [Catenibacterium mitsuokai DSM 15897] Length = 373 Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats. Identities = 143/371 (38%), Positives = 218/371 (58%), Gaps = 8/371 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ID+ KL++NL+ + + G K+LLA KCF+ + + + +Y+ GTT+S LY Sbjct: 6 LPTPCFVIDETKLIHNLEILKEVEERTGAKILLAQKCFSCFEEYPLIGKYISGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG EK G E H Y+ AY+ +I+ + CD I+FN+ +QL ++ + IG+R Sbjct: 66 EARLGKEKMGLENHVYSPAYRSQDIEELAEICDHIVFNSKAQLKRYAEVV--KDTSIGIR 123 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S + DP P SR+G + D + + V+GL FH CE S LK Sbjct: 124 INPECSTQVGHAIYDPCAPGSRMGIRACDFDDEIAEMVDGLHFHTLCEQNSDD-LETTLK 182 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++F ++ Q++W+++GGG H T DY V+ Q + E Y +Q+YLEPGEA+ N Sbjct: 183 AVEEKFSKWLPQMKWLNMGGGHHITRDDYDVERLIQCINHMQETYDLQVYLEPGEAVALN 242 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296 T VLDI EN ++I+D+S H+PD L + PN YT + + Sbjct: 243 AGYNVTEVLDIVENNGKILILDTSAACHMPDVLEMPYRPPLKESGLPNELAYTYRLSCNT 302 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ GE+ F+ +KIGD++ FED+A Y++ + N FNGI +P+IAV + +G + I+E Sbjct: 303 CLAGDVIGEYSFDHEIKIGDKLYFEDMAIYSMVKTNTFNGIPLPSIAVMDQNGECRIIKE 362 Query: 357 FSYNDYYNNLS 367 F Y D+ N LS Sbjct: 363 FGYEDFKNRLS 373 >gi|256368792|ref|YP_003106298.1| carboxynorspermidine decarboxylase [Brucella microti CCM 4915] gi|255998950|gb|ACU47349.1| carboxynorspermidine decarboxylase [Brucella microti CCM 4915] Length = 365 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 225/367 (61%), Positives = 277/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 1 MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA + GL Sbjct: 61 NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + + G M HNNCEN F F ML Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + ++EW+SLGGGIHFT +DYPV FC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNKGGHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEGSLS 365 >gi|307127526|ref|YP_003879557.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae 670-6B] gi|306484588|gb|ADM91457.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae 670-6B] gi|332075533|gb|EGI86001.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA17545] Length = 375 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 129/371 (34%), Positives = 205/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ G K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGAHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 EVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|149002465|ref|ZP_01827399.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP14-BS69] gi|237651127|ref|ZP_04525379.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CCRI 1974] gi|237821875|ref|ZP_04597720.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CCRI 1974M2] gi|147759402|gb|EDK66394.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP14-BS69] gi|332076201|gb|EGI86667.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA41301] Length = 375 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 129/371 (34%), Positives = 205/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ G K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 EVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|260438735|ref|ZP_05792551.1| carboxynorspermidine decarboxylase [Butyrivibrio crossotus DSM 2876] gi|292808861|gb|EFF68066.1| carboxynorspermidine decarboxylase [Butyrivibrio crossotus DSM 2876] Length = 376 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 132/374 (35%), Positives = 208/374 (55%), Gaps = 11/374 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID+ + N + K G +LLA K F+ + ++ + +Y+ GTT+S LY Sbjct: 6 LPTPCYVIDENIIEENCKVLADVMKKTGCHVLLAQKAFSNYALYPLIGKYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E+ G E H + AYKD ++D ++ CD I+FN++SQL K K+K + + IG+R Sbjct: 66 EARLGREEMGRENHVFAPAYKDEDMDELVKICDHIVFNSISQLEKHKEKCRNVS--IGIR 123 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S + DP SRLG +++ ++GL FH CE S L Sbjct: 124 VNPEFSTQNGHEIYDPCGKGSRLGVTADLLRNADLTGIDGLHFHTLCEQNSDD-LKKTLD 182 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++F + +++W++ GGG H T KDY V+ C + EKY+V++Y+EPGEA+ N Sbjct: 183 VVEEKFDFLLRKVKWVNFGGGHHITRKDYDVELLCDCITHIKEKYNVKVYIEPGEAVALN 242 Query: 241 TTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESAT------IYPNTGPYTAMVC 293 TTVLD + + +I+D S H+PD L + I + + Sbjct: 243 AGYFITTVLDKVKNSGITCLILDGSAACHMPDVLEMPYTPPLSEGSIIETPEKEFDYRLG 302 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G +CLAGDI G + F+ V+IG+R++F D+A Y++ + N FNGI +P+I + +G + Sbjct: 303 GNTCLAGDIIGNYRFDHDVQIGERLTFCDMAIYSMVKNNTFNGIPLPSIYSMDRNGDCRL 362 Query: 354 IREFSYNDYYNNLS 367 I+ F YND+ LS Sbjct: 363 IKSFGYNDFKERLS 376 >gi|148984662|ref|ZP_01817930.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP3-BS71] gi|147923053|gb|EDK74168.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP3-BS71] gi|301799905|emb|CBW32484.1| putative carboxynorspermidine decarboxylase [Streptococcus pneumoniae OXC141] Length = 375 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 205/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ G K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++WI++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWINMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|306825224|ref|ZP_07458566.1| carboxynorspermidine decarboxylase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432660|gb|EFM35634.1| carboxynorspermidine decarboxylase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 375 Score = 278 bits (712), Expect = 8e-73, Method: Composition-based stats. Identities = 134/371 (36%), Positives = 207/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLETNCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ IGLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGPRCREAGISIGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTSDKIPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E +FG ++ +++W+++GGG H T +DY V +K E Y++++Y+EPGEAIV N Sbjct: 185 AVEAQFGSYLHEVKWLNMGGGHHITREDYDVDLLISEIKRIQETYNLEVYIEPGEAIVLN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAKEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ FED+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVEIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDEQGNCSLVKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|225861186|ref|YP_002742695.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae Taiwan19F-14] gi|298230761|ref|ZP_06964442.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254582|ref|ZP_06978168.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503067|ref|YP_003725007.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae TCH8431/19A] gi|225726871|gb|ACO22722.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae Taiwan19F-14] gi|298238662|gb|ADI69793.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae TCH8431/19A] gi|327389203|gb|EGE87548.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA04375] Length = 375 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 129/371 (34%), Positives = 205/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ G K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDADLEELLGITDHIVFNSERQLRKHGARCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|149006405|ref|ZP_01830117.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP18-BS74] gi|147762182|gb|EDK69144.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP18-BS74] Length = 375 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 129/371 (34%), Positives = 206/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ G K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDADLEELLEIMDHIVFNSERQLRKHGPRCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L ++ +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPSLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|148559900|ref|YP_001258372.1| carboxynorspermidine decarboxylase [Brucella ovis ATCC 25840] gi|148371157|gb|ABQ61136.1| carboxynorspermidine decarboxylase [Brucella ovis ATCC 25840] Length = 365 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 226/367 (61%), Positives = 277/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 1 MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA + GL Sbjct: 61 NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + + G M HNNCEN F F ML Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + +IEW+SLGGGIHFT +DYPV FC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 179 DIEEKFGSLLHRIEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEGSLS 365 >gi|322420302|ref|YP_004199525.1| carboxynorspermidine decarboxylase [Geobacter sp. M18] gi|320126689|gb|ADW14249.1| carboxynorspermidine decarboxylase [Geobacter sp. M18] Length = 384 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 124/372 (33%), Positives = 205/372 (55%), Gaps = 8/372 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P +++D +L +NL ++K +G K+LLALK F+ W +F + + + G +SS +E Sbjct: 14 PSPAFVVDLGRLRHNLAILDEVQKRSGAKILLALKAFSMWSVFPIIEKTLHGICASSPWE 73 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120 LG E+FGGE H+++ A+K+ ++ +L+ + ++FN+ +QL +F + IGL Sbjct: 74 ARLGREEFGGEVHSFSAAFKESDVAELLTTSNHLVFNSFNQLERFRSMWEEYAGRVSIGL 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + DP P SRLG + + V GL FH CE F K Sbjct: 134 RVNPGHSEGHTPIYDPAAPKSRLGILRSEFEGRSLAGVEGLHFHTLCEQL-FDPLERTAK 192 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 E++FG F+ +++W++LGGG H T + Y + + ++ F KY +++YLEPGEAI Sbjct: 193 VFEEQFGEFLPRMKWLNLGGGHHITREGYDIDALVELVRYFRRKYDLEVYLEPGEAIAIG 252 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296 T L + VLD+ N ++ ++D S H+PD L I P + + G S Sbjct: 253 TGILVSEVLDVVHNEVDIAVLDVSATCHMPDILEMPYRPEIQNGYLPGEKGHDYRLGGPS 312 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355 CLAGD+ G++ F+ + IG++++F D++ Y + + FNGI +P I G ++ +R Sbjct: 313 CLAGDVIGDWSFDHRLAIGEKLAFLDMSHYTMVKTTTFNGIQLPHICTYEPQTGELRVVR 372 Query: 356 EFSYNDYYNNLS 367 F Y D+ N LS Sbjct: 373 SFGYEDFKNRLS 384 >gi|270292720|ref|ZP_06198931.1| carboxynorspermidine decarboxylase [Streptococcus sp. M143] gi|270278699|gb|EFA24545.1| carboxynorspermidine decarboxylase [Streptococcus sp. M143] Length = 375 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 132/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + + +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGARCRAAGISVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPRCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T +DY V +K E Y++++Y+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREDYDVDLLISEIKRIRETYNLEVYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATKVLDIVENSMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKIHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ FED+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDERGDCSLVKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|169833511|ref|YP_001694373.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae Hungary19A-6] gi|225858718|ref|YP_002740228.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae 70585] gi|168996013|gb|ACA36625.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae Hungary19A-6] gi|225722120|gb|ACO17974.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae 70585] Length = 375 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 129/371 (34%), Positives = 205/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ G K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDADLEELLGITDHIVFNSERQLRKHGARCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|150019219|ref|YP_001311473.1| carboxynorspermidine decarboxylase [Clostridium beijerinckii NCIMB 8052] gi|149905684|gb|ABR36517.1| carboxynorspermidine decarboxylase [Clostridium beijerinckii NCIMB 8052] Length = 379 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 139/372 (37%), Positives = 221/372 (59%), Gaps = 8/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P YL+D++ L NL+T Y++K G ++LA K F+ + F + +Y+ G TSSSL+ Sbjct: 9 LPSPCYLVDERLLKKNLETLDYVQKETGANIILATKAFSMYSTFPLIGRYLKGVTSSSLH 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK---LHKKI 118 E LG+E+ G E H Y+ AY++ E D ++ D I+FN+ SQ K+KDK + + Sbjct: 69 EARLGYEEMGKEVHIYSPAYREDEFDEIMKYSDHIVFNSFSQWRKYKDKVKNFKGKKIEC 128 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 +RINP S + + +P SR+G + E +I+ ++GL FH CE S Sbjct: 129 AIRINPEYSEIETDIYNPCFENSRMGVTLANFEEEDIEGIDGLHFHTMCEQNS-DTLERT 187 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +K ++++FG +I +++WI+ GGG H T +DY ++ + +K +KY VQ+YLEPGEAI Sbjct: 188 IKVVDEKFGKYIKKMKWINFGGGHHITREDYDIETLIKSIKFIKDKYGVQVYLEPGEAIA 247 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCG 294 NT L +TVLD +N ++ I+D+S E H+PD L I P +T G Sbjct: 248 LNTGFLVSTVLDTMKNGMDIAILDTSAECHMPDVLAMPYRPNIIGAGKPNEFEFTYRFGG 307 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +CLAGDI G++ F++P+K GD++ F D+A Y++ + N FNG+N+P I + + I+ I Sbjct: 308 PTCLAGDIIGDYSFKEPLKPGDKLVFCDMAIYSMVKNNTFNGVNLPAIVKYSEEKGIEVI 367 Query: 355 REFSYNDYYNNL 366 +EF Y D+ L Sbjct: 368 KEFGYEDFKARL 379 >gi|77919691|ref|YP_357506.1| carboxynorspermidine decarboxylase [Pelobacter carbinolicus DSM 2380] gi|77545774|gb|ABA89336.1| carboxynorspermidine decarboxylase [Pelobacter carbinolicus DSM 2380] Length = 397 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 136/371 (36%), Positives = 204/371 (54%), Gaps = 8/371 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D +L +NL+ ++K +G K+LLALK FA W F + Q + G +SS +E Sbjct: 27 PSPAYVVDLGRLRHNLEILDQVQKRSGAKILLALKAFALWKTFPLIRQTLHGVCASSPWE 86 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 LG E+FG E H++ A+K+ ++ +L + ++FN+ +QL +F+ +K IGL Sbjct: 87 ARLGREEFGREVHSFAAAFKESDVVELLGISNHLVFNSFAQLERFRPLWEKEKGRVSIGL 146 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 RINP S L DP P SRLG + + V GL FH CE + + Sbjct: 147 RINPEHSEGHTALYDPCAPGSRLGIPRAEFEGKSLDGVEGLHFHTLCEQL-YEPLARTAA 205 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG F+ Q++W + GGG H T + Y + + +K F KY VQ+YLEPGEAI Sbjct: 206 VVEEKFGSFLPQMKWFNFGGGHHITREGYDIDSLVELIKYFQGKYGVQVYLEPGEAIAIG 265 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L + VLD+ N + I+D S H+PD L IY P T + G S Sbjct: 266 TGLLVSEVLDVVHNRVDTAILDVSATCHMPDVLEMPYRPDIYGGFDAGAKPCTYRLGGPS 325 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIR 355 CLAGD+ G++ FE+P+ G R++F D+A Y + + FNGI+ P+I D G ++ +R Sbjct: 326 CLAGDVIGDWSFEEPLHAGQRLAFLDMAHYTMVKTTTFNGIHHPSICTYEPDTGELEVLR 385 Query: 356 EFSYNDYYNNL 366 F Y D+ N L Sbjct: 386 HFDYEDFRNRL 396 >gi|182418088|ref|ZP_02949391.1| carboxynorspermidine decarboxylase [Clostridium butyricum 5521] gi|237667715|ref|ZP_04527699.1| carboxynorspermidine decarboxylase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378057|gb|EDT75594.1| carboxynorspermidine decarboxylase [Clostridium butyricum 5521] gi|237656063|gb|EEP53619.1| carboxynorspermidine decarboxylase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 381 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 131/373 (35%), Positives = 222/373 (59%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++D++ L NL+ Y++K +G ++LA K F+ + F + +Y+ G TSSSL+ Sbjct: 10 LPSPCYIVDERLLRKNLEVLDYVQKESGANIILATKAFSMFSTFPLIGKYLKGVTSSSLF 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK---KI 118 E LG+E+ G + H ++ AY++ E + ++ D IIFN+ +Q +KD+ + + Sbjct: 70 EARLGYEEMGKQVHIFSPAYREDEFEDIMKYSDHIIFNSFNQWKLYKDRVKNYKDKKIQC 129 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 G+RINP S + + +P SR+G K+ E+++ ++GL FH CE S + Sbjct: 130 GIRINPEYSEIETDIYNPCFENSRMGVTLKNFEENDLDGIDGLHFHTMCEQNS-DTLART 188 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +K ++ +FG +I ++W++ GGG H T DY +K + + KY+++IYLEPGEA+ Sbjct: 189 IKVVDDKFGKYIKNMKWLNFGGGHHITRDDYDLKTLIESVLYMKNKYNIEIYLEPGEAVA 248 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCG 294 N+ L +TVLDI+ N ++ I+D+S H+PD L I P YT G Sbjct: 249 LNSGFLVSTVLDITNNGMDIAILDTSAACHMPDVLEMPYRPNIIGSGKPYEYEYTYRFGG 308 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +CLAGDI G++ F++P+K+GD++ F D+A Y++ + N FNGIN+P+I + + ++ I Sbjct: 309 PTCLAGDIIGDYSFKEPLKVGDKLIFCDMAIYSMVKNNTFNGINLPSIVKYSEENGVEII 368 Query: 355 REFSYNDYYNNLS 367 +EF Y D+ LS Sbjct: 369 KEFGYEDFKGRLS 381 >gi|307708674|ref|ZP_07645137.1| carboxynorspermidine decarboxylase [Streptococcus mitis NCTC 12261] gi|307615248|gb|EFN94458.1| carboxynorspermidine decarboxylase [Streptococcus mitis NCTC 12261] Length = 375 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 133/371 (35%), Positives = 207/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLPKLEGNCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L + I+FN+ QL K + + +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDADLEELLEITNHIVFNSERQLRKHGARCRDAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTSDKIPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ Q++W+++GGG H T +DY V +K E Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGAYLHQVKWLNMGGGHHITREDYDVDLLISEIKRIRETYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFAAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ FED+A Y+ + N FNGI +P++ + + G + ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCRLVKS 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|306842400|ref|ZP_07475054.1| carboxynorspermidine decarboxylase [Brucella sp. BO2] gi|306287464|gb|EFM58937.1| carboxynorspermidine decarboxylase [Brucella sp. BO2] Length = 365 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 225/367 (61%), Positives = 277/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 1 MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA + GL Sbjct: 61 NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + + G M HNNCEN F F ML Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMNRITGFMIHNNCENSDFSLFDRMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + ++EW+SLGGGIHFT +DYPV FC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEGSLS 365 >gi|62289327|ref|YP_221120.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 1 str. 9-941] gi|82699256|ref|YP_413830.1| carboxynorspermidine decarboxylase [Brucella melitensis biovar Abortus 2308] gi|163842622|ref|YP_001627026.1| carboxynorspermidine decarboxylase [Brucella suis ATCC 23445] gi|189023580|ref|YP_001934348.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus S19] gi|237814818|ref|ZP_04593816.1| carboxynorspermidine decarboxylase [Brucella abortus str. 2308 A] gi|254688645|ref|ZP_05151899.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 6 str. 870] gi|254693126|ref|ZP_05154954.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 3 str. Tulya] gi|254696768|ref|ZP_05158596.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 2 str. 86/8/59] gi|254701152|ref|ZP_05162980.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 5 str. 513] gi|254707928|ref|ZP_05169756.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis M163/99/10] gi|254709494|ref|ZP_05171305.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis B2/94] gi|254729677|ref|ZP_05188255.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 4 str. 292] gi|256030988|ref|ZP_05444602.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis M292/94/1] gi|256060478|ref|ZP_05450649.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella neotomae 5K33] gi|256256892|ref|ZP_05462428.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 9 str. C68] gi|260545919|ref|ZP_05821660.1| orn/DAP/Arg decarboxylase, family 2 [Brucella abortus NCTC 8038] gi|260754119|ref|ZP_05866467.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 6 str. 870] gi|260757339|ref|ZP_05869687.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 4 str. 292] gi|260761163|ref|ZP_05873506.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 2 str. 86/8/59] gi|260883144|ref|ZP_05894758.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 9 str. C68] gi|261213365|ref|ZP_05927646.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 3 str. Tulya] gi|261315417|ref|ZP_05954614.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis M163/99/10] gi|261317018|ref|ZP_05956215.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis B2/94] gi|261324471|ref|ZP_05963668.1| carboxynorspermidine decarboxylase [Brucella neotomae 5K33] gi|261751688|ref|ZP_05995397.1| carboxynorspermidine decarboxylase [Brucella suis bv. 5 str. 513] gi|265988055|ref|ZP_06100612.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis M292/94/1] gi|294851721|ref|ZP_06792394.1| carboxynorspermidine decarboxylase [Brucella sp. NVSL 07-0026] gi|297247743|ref|ZP_06931461.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 5 str. B3196] gi|62195459|gb|AAX73759.1| NspC, carboxynorspermidine decarboxylase [Brucella abortus bv. 1 str. 9-941] gi|82615357|emb|CAJ10319.1| Orn/DAP/Arg decarboxylase, family 2:Carboxynorspermidine decarboxylase [Brucella melitensis biovar Abortus 2308] gi|163673345|gb|ABY37456.1| carboxynorspermidine decarboxylase [Brucella suis ATCC 23445] gi|189019152|gb|ACD71874.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus S19] gi|237789655|gb|EEP63865.1| carboxynorspermidine decarboxylase [Brucella abortus str. 2308 A] gi|260097326|gb|EEW81201.1| orn/DAP/Arg decarboxylase, family 2 [Brucella abortus NCTC 8038] gi|260667657|gb|EEX54597.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 4 str. 292] gi|260671595|gb|EEX58416.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 2 str. 86/8/59] gi|260674227|gb|EEX61048.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 6 str. 870] gi|260872672|gb|EEX79741.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 9 str. C68] gi|260914972|gb|EEX81833.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 3 str. Tulya] gi|261296241|gb|EEX99737.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis B2/94] gi|261300451|gb|EEY03948.1| carboxynorspermidine decarboxylase [Brucella neotomae 5K33] gi|261304443|gb|EEY07940.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis M163/99/10] gi|261741441|gb|EEY29367.1| carboxynorspermidine decarboxylase [Brucella suis bv. 5 str. 513] gi|264660252|gb|EEZ30513.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis M292/94/1] gi|294820310|gb|EFG37309.1| carboxynorspermidine decarboxylase [Brucella sp. NVSL 07-0026] gi|297174912|gb|EFH34259.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 5 str. B3196] Length = 365 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 225/367 (61%), Positives = 277/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 1 MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA + GL Sbjct: 61 NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + + G M HNNCEN F F ML Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + ++EW+SLGGGIHFT +DYPV FC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEGSLS 365 >gi|169828941|ref|YP_001699099.1| hypothetical protein Bsph_3481 [Lysinibacillus sphaericus C3-41] gi|168993429|gb|ACA40969.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 379 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 142/372 (38%), Positives = 219/372 (58%), Gaps = 7/372 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++D++ L NL+ I+ G ++LLALK F+ F + +Y+ G T+SSL+ Sbjct: 9 VPSPSYVVDERLLTKNLELLKSIQDRTGCRILLALKGFSMHSTFPLVGEYLAGITASSLH 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIG 119 E LG+EK G E H Y AY + E+D +L D I+FN+ +Q +FKDK + + G Sbjct: 69 EARLGYEKMGKEVHVYAPAYIEHEMDELLGYVDHIVFNSFNQWAQFKDKVKSAGKTIECG 128 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S + L DP SRLG + +S++ ++GL FH CE S ++ Sbjct: 129 IRVNPEYSEIETALYDPCYTNSRLGTTLANFDKSQLDGIDGLHFHAMCEQNS-DTLERII 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + +E++FG + Q++W++ GGG H T +DY V+ + EKY++ +YLEPGEA+ Sbjct: 188 EVVEEKFGDVLHQMKWLNFGGGHHITREDYDVEKLVNIINYIQEKYNLLVYLEPGEAVAL 247 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGR 295 NT L TVLDI +N +L I+D+S H+PD L I N +T + G Sbjct: 248 NTGYLVATVLDIQKNGMDLAILDTSATCHMPDVLEMPYRPMIIGSGQANEFAHTYRLGGL 307 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGD+ G++ FE+P+K GDR+ F D+A Y++ + + FNG+N+P+I N + IK IR Sbjct: 308 TCLAGDVIGDYSFEQPLKPGDRLVFTDMAHYSMVKNHMFNGVNLPSIVSYNDEEGIKIIR 367 Query: 356 EFSYNDYYNNLS 367 EF + DY LS Sbjct: 368 EFKFEDYSGRLS 379 >gi|134094073|ref|YP_001099148.1| putative carboxynorspermide decarboxylase [Herminiimonas arsenicoxydans] gi|55977154|gb|AAV68371.1| putative carboxynorspermide decarboxylase [Herminiimonas arsenicoxydans] gi|133737976|emb|CAL61021.1| Carboxynorspermidine decarboxylase [Herminiimonas arsenicoxydans] Length = 365 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 204/367 (55%), Positives = 268/367 (73%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI TPYYLIDK LL NL +R+ +G K+LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MISTPYYLIDKSALLRNLQVIDQVRERSGAKVLLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YEV LGH+KFGGETHAY+VA+ D EID V+++CD IIFN++SQ +F A GL Sbjct: 61 YEVKLGHQKFGGETHAYSVAFADHEIDEVVAHCDKIIFNSISQFQRFSSHAGNKP--KGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS + F LADP RPFSRLGE +I S I ++G+M HNNCEN+ F F A+L Sbjct: 119 RLNPGVSCASFDLADPARPFSRLGESDPARILSIIDQLDGVMIHNNCENRDFERFDALLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E+ +G + ++ W+SLGGGI FT Y + FC+RL+ F++ Y VQ+YLEPGEA V + Sbjct: 179 EVEQRYGEILHRLSWVSLGGGISFTTPGYSIDAFCERLRRFAQTYDVQVYLEPGEATVRD 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL +V+DI N KNL +VDSS EAH+ D L+Y+E+A I G + +CG++CLAG Sbjct: 239 TTTLEVSVVDIGFNGKNLAVVDSSTEAHMLDLLIYRETAPIKNAQGDHAYQICGKTCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE FE+P++IGDRIS D GY + +KNWFNG++MP IA+K DG+++A+REFS++ Sbjct: 299 DIFGEARFEQPLQIGDRISIGDAGGYTMVKKNWFNGVHMPAIAIKEADGSVRAVREFSFD 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYVSSLS 365 >gi|260432794|ref|ZP_05786765.1| carboxynorspermidine decarboxylase [Silicibacter lacuscaerulensis ITI-1157] gi|260416622|gb|EEX09881.1| carboxynorspermidine decarboxylase [Silicibacter lacuscaerulensis ITI-1157] Length = 389 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 127/368 (34%), Positives = 202/368 (54%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D++ + NL I + +G +L ALK F+ + + + QY+ GT +S +Y Sbjct: 23 VPSPCFVVDEKAVEKNLRILAEIGERSGAHVLSALKAFSMFALAPVVRQYLGGTCASGIY 82 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E++GGE + YKD +ID +L+ D IIFN+ +Q ++F KAQ +++GLR Sbjct: 83 EARLGREEYGGEVATFCAGYKDSDIDEILALSDHIIFNSPAQKDRFLPKAQAAGRQVGLR 142 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + DP P SRLG ++ V+GL H CE F + Sbjct: 143 INPEHSEGEVAKYDPCAPCSRLGTPVSQLDAKALEGVDGLHMHTLCEQG-FEPLARTWAA 201 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E + F+ ++W++ GGG H T DY +K KY V+IYLEPGEA+ + Sbjct: 202 VEPKLAPFLNDLKWLNFGGGHHITRSDYDRDGLVDFIKHIRAKYGVEIYLEPGEAVALDA 261 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN-TGPYTAMVCGRSCLAG 300 L +LD+ N +L I D S H+PD + + +T + G SCLAG Sbjct: 262 GILVGEILDLPHNGMDLAITDISATCHMPDVIEAPYRPALMDEAETGHTYRLGGPSCLAG 321 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSY 359 D+ G++ + +P++IG R +F D A Y++ + N FNG+ +PTIA+ N + +K I++F Y Sbjct: 322 DVIGDYTWAEPLQIGQRFAFLDQAHYSMVKTNTFNGVPLPTIALWNSETDDLKIIKQFGY 381 Query: 360 NDYYNNLS 367 +D+ LS Sbjct: 382 DDFKERLS 389 >gi|17987872|ref|NP_540506.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|225851878|ref|YP_002732111.1| carboxynorspermidine decarboxylase [Brucella melitensis ATCC 23457] gi|256044058|ref|ZP_05446969.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str. Rev.1] gi|256264609|ref|ZP_05467141.1| orn/DAP/Arg decarboxylase [Brucella melitensis bv. 2 str. 63/9] gi|260563419|ref|ZP_05833905.1| orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis bv. 1 str. 16M] gi|265990472|ref|ZP_06103029.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str. Rev.1] gi|17983604|gb|AAL52770.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|225640243|gb|ACO00157.1| carboxynorspermidine decarboxylase [Brucella melitensis ATCC 23457] gi|260153435|gb|EEW88527.1| orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis bv. 1 str. 16M] gi|263001256|gb|EEZ13831.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str. Rev.1] gi|263094973|gb|EEZ18681.1| orn/DAP/Arg decarboxylase [Brucella melitensis bv. 2 str. 63/9] gi|326408376|gb|ADZ65441.1| carboxynorspermidine decarboxylase [Brucella melitensis M28] gi|326538091|gb|ADZ86306.1| carboxynorspermidine decarboxylase [Brucella melitensis M5-90] Length = 365 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 225/367 (61%), Positives = 278/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 1 MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA + GL Sbjct: 61 NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E+ + + G M HNNCEN F F ML Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVENVMDRITGFMIHNNCENSDFSLFDRMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + ++EW+SLGGGIHFT +DYPV FC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEGSLS 365 >gi|49476298|ref|YP_034339.1| carboxynorspermidine decarboxylase [Bartonella henselae str. Houston-1] gi|49239106|emb|CAF28409.1| Carboxynorspermidine decarboxylase [Bartonella henselae str. Houston-1] Length = 365 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 206/367 (56%), Positives = 267/367 (72%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDK KL+ N++ +R+ +G K+LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 1 MIKTPYYLIDKSKLIRNMEIIARLREMSGAKVLLALKCFATWSVFDLMSKYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID S D IIFN++ QL +F + + GL Sbjct: 61 YELRLGKEKFGKETHAYSVAWADYEIDETCSYADKIIFNSIQQLQRFANV--TKTIQRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LA+P+RPFSRLGE + I+ + +NGLM HNNCEN F F MLK Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQKAIKEVLPLINGLMIHNNCENADFNLFDQMLK 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 ++E+ F ++WISLGGGIHFT ++YP++ F +RLK FS+ Y V I+LEPGEA +T Sbjct: 179 HMEERFAELFAAVDWISLGGGIHFTAENYPLETFAERLKHFSKTYDVTIFLEPGEAAITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL +VLD N KNL IVDSS+EAH+ D L+Y+E+A + N GPY MVCG+SCLAG Sbjct: 239 STTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIYRENAKLEQNQGPYEIMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG F F +P+KIGDR+SF+D AGY + +KNWFNG+ MP I +K +G + R+FSYN Sbjct: 299 DIFGTFRFPEPLKIGDRLSFQDTAGYTMVKKNWFNGVTMPAIVIKECNGALTIQRQFSYN 358 Query: 361 DYYNNLS 367 DY +LS Sbjct: 359 DYQKSLS 365 >gi|23501241|ref|NP_697368.1| carboxynorspermidine decarboxylase [Brucella suis 1330] gi|161618317|ref|YP_001592204.1| carboxynorspermidine decarboxylase [Brucella canis ATCC 23365] gi|254703698|ref|ZP_05165526.1| carboxynorspermidine decarboxylase [Brucella suis bv. 3 str. 686] gi|260567050|ref|ZP_05837520.1| orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 4 str. 40] gi|261754341|ref|ZP_05998050.1| carboxynorspermidine decarboxylase [Brucella suis bv. 3 str. 686] gi|23347124|gb|AAN29283.1| carboxynorspermidine decarboxylase [Brucella suis 1330] gi|161335128|gb|ABX61433.1| carboxynorspermidine decarboxylase [Brucella canis ATCC 23365] gi|260156568|gb|EEW91648.1| orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 4 str. 40] gi|261744094|gb|EEY32020.1| carboxynorspermidine decarboxylase [Brucella suis bv. 3 str. 686] Length = 365 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 224/367 (61%), Positives = 277/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ Y+R+ +G + LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 1 MIQTPYYLIDKTKLKRNMEKIAYVREKSGARALLALKCFATWSVFDLMSEYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA + GL Sbjct: 61 NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + + G M HNNCEN F F ML Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + ++EW+SLGGGIHFT +DYPV FC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEGSLS 365 >gi|254718525|ref|ZP_05180336.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella sp. 83/13] gi|265983495|ref|ZP_06096230.1| carboxynorspermidine decarboxylase [Brucella sp. 83/13] gi|306838333|ref|ZP_07471179.1| carboxynorspermidine decarboxylase [Brucella sp. NF 2653] gi|264662087|gb|EEZ32348.1| carboxynorspermidine decarboxylase [Brucella sp. 83/13] gi|306406624|gb|EFM62857.1| carboxynorspermidine decarboxylase [Brucella sp. NF 2653] Length = 365 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 223/367 (60%), Positives = 277/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ Y+R+ +G K LLALKCFA W +F+ +++YMDGTTSSSL Sbjct: 1 MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFNLMSEYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA + GL Sbjct: 61 NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + + G M HNNCEN F F ML Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + ++EW+SLGGGIHFT +DYPV FC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+KP+ IGDR+SF+D AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y Sbjct: 299 DIFGEFTFDKPLAIGDRLSFKDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEGSLS 365 >gi|88798871|ref|ZP_01114453.1| carboxynorspermidine decarboxylase [Reinekea sp. MED297] gi|88778351|gb|EAR09544.1| carboxynorspermidine decarboxylase [Reinekea sp. MED297] Length = 388 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 130/376 (34%), Positives = 211/376 (56%), Gaps = 11/376 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ + NL + + +G ++L ALK F+ W QY+ GT SS L+ Sbjct: 14 VPSPCFVVDEVAIERNLKILHDVAEQSGARILGALKAFSMWHFGPLTGQYLSGTCSSGLH 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-----KAQKLHK 116 E L + + GE H ++ A+ +++ +L+ D ++FN+ SQ +F+ A++ H Sbjct: 74 EARLAKDYYPGEVHVFSAAFSQPDLEEILTLADHVVFNSCSQWQRFQPQIQAALAKRPHM 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 GLRINP S + DP P SRLG + ES ++ ++GL FH CE F Sbjct: 134 DFGLRINPEHSEGDVPIYDPCAPGSRLGIPLSELDESALEGISGLHFHTLCEQG-FEPLD 192 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 L E++FGH ++++WI+ GGG H T DY + +R++ F EKY+V++YLEPGEA Sbjct: 193 RTLTVFEEKFGHLFSKMKWINFGGGHHITAPDYDREALIRRIRAFKEKYNVEVYLEPGEA 252 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMV 292 + + L VLD++ N I+D+S H+PD L A I P +T + Sbjct: 253 MAIGSGVLVAEVLDLTFNTLPQAILDTSATCHMPDTLEMPYRADISNAGEPGEKAHTYRL 312 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV-DGTI 351 G +CLAGD+ G++ F++P++IG R+ FED+A Y + + + FNG +P+IAV N Sbjct: 313 GGLTCLAGDVIGDYSFDQPLEIGQRLIFEDMAHYTMVKTSTFNGTRLPSIAVWNSTTDAF 372 Query: 352 KAIREFSYNDYYNNLS 367 +R+F Y+D+ + LS Sbjct: 373 SVVRDFDYDDFRSRLS 388 >gi|256112854|ref|ZP_05453775.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 3 str. Ether] gi|265994300|ref|ZP_06106857.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 3 str. Ether] gi|262765413|gb|EEZ11202.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 3 str. Ether] Length = 365 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 225/367 (61%), Positives = 278/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 1 MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA + GL Sbjct: 61 NEVRLGHEKFGGETHAYSVAYADYEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E+ + + G M HNNCEN F F ML Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVENVMDRITGFMIHNNCENSDFSLFDRMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + ++EW+SLGGGIHFT +DYPV FC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEGSLS 365 >gi|319946804|ref|ZP_08021038.1| carboxynorspermidine decarboxylase [Streptococcus australis ATCC 700641] gi|319746852|gb|EFV99111.1| carboxynorspermidine decarboxylase [Streptococcus australis ATCC 700641] Length = 375 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 133/371 (35%), Positives = 205/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N +++ G K+LLA K ++ + + ++QY+ GTT+S Y Sbjct: 6 VPTPSYIIDLGKLEENCRILQEVQEKTGCKVLLAQKAYSLYKTYPLISQYLSGTTASGFY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+K+ +++ +L D I+FN+ QL K+ + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKESDMEELLKISDHIVFNSERQLRKYGQRCREAGISVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+GL FH CE + LK Sbjct: 126 LNPKCSTQGDHALYDPCAPGSRFGVTSDKIPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ Q++W+++GGG H T DY V +K E Y++ IY+EPGEAI N Sbjct: 185 AVEEQFGAYLHQVKWLNMGGGHHITRDDYDVDLLISEIKRIRETYNLDIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN +++D+S H+PD L + PYT + + Sbjct: 245 AGYLATEVLDIVENGIETLVLDASASCHMPDVLEMPYRPPLRDGFEAQEKPYTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GDI G++ FEKP++IGDR+ FED+A Y+ + N FNGI +P++ + + +G ++ Sbjct: 305 CLTGDIIGDYSFEKPIEIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDKEGECSLVKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKERLS 375 >gi|332202776|gb|EGJ16845.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA41317] Length = 375 Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 129/371 (34%), Positives = 205/371 (55%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID KL N Y+++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPTPAYVIDLAKLEANCCILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+KD +++ +L D I+FN+ QL K + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGPRCREAGVSVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S L DP P SR G + V+G FH CE + LK Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGFHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ +++W+++GGG H T + Y V +K + Y+++IY+EPGEAI N Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN ++++D+S H+PD L + +T + + Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD+ G++ FE PV+IGDR+ F+D+A Y+ + N FNGI +P++ + + G ++ Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYQDFKGRLS 375 >gi|70730900|ref|YP_260641.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens Pf-5] gi|68345199|gb|AAY92805.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens Pf-5] Length = 365 Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 216/367 (58%), Positives = 279/367 (76%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDKQKLL+N+ Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKQKLLSNMQKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG +KF GETHAY+VA+ D EI+ +L+NCD IIFN++SQL +F D + K GL Sbjct: 61 YELKLGRQKFEGETHAYSVAWADDEIEEMLANCDKIIFNSISQLQRFADAS--AGKVRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE KIE I+ ++G MFHNNCEN F F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEQVIEQISGFMFHNNCENGDFGLFDQMLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+ FGH + ++EW+SLGGGIHFT +DY + FC RLK FS+KY VQ+YLEPGEA +T Sbjct: 179 TIEERFGHLLHKVEWVSLGGGIHFTGEDYALDAFCARLKAFSQKYGVQVYLEPGEAAITQ 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N K+L +VDSS+EAH+ D L+Y+ +A + P+ G +T MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHMLDLLIYRLNAKLSPSAGEHTYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+I+ +REF + Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDAAGYTMVKKNWFNGLKMPSIVVKQLDGSIEVVREFGFE 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYLSSLS 365 >gi|325265253|ref|ZP_08131978.1| carboxynorspermidine decarboxylase [Clostridium sp. D5] gi|324029432|gb|EGB90722.1| carboxynorspermidine decarboxylase [Clostridium sp. D5] Length = 375 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 201/371 (54%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP YL+D+ L NNL +++ G ++LLA K F+ + ++ + Y+ G T+S LY Sbjct: 6 LRTPVYLVDEAILENNLKILAKVQEETGSRILLAQKAFSMYHVYPMIRHYLAGATASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+ GGE H ++ AY E+ + CD I FN+++QL + + + GLR Sbjct: 66 EARLAAEEMGGENHVFSPAYTAKEMQELCGICDHISFNSIAQLERHRALWESNGVSAGLR 125 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S + DP P SRLG + + K V GL H CE + Sbjct: 126 INPEHSTQEGHPIYDPCAPGSRLGIRRELFPGKLPKGVEGLHIHTLCEQD-AAPLVETFE 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ Q++W++LGGG H T Y + L + Y VQ+YLEPGEAI N Sbjct: 185 AVEEKFGEYLHQLKWLNLGGGHHITRPGYDLDTLKDLLCRIRDTYQVQVYLEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296 L T V+DI EN + ++I+D+S H+PD L + P P T + R+ Sbjct: 245 AGYLITEVMDIVENERPVLILDASAACHMPDVLEMPYRPPLKDSGMPGEKPVTCTLACRT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ G++ F+ IG+R+ FED+A Y + + + FNG+ +P IA+ DG + +++ Sbjct: 305 CLAGDVIGDYSFDMQPGIGERLVFEDMAIYTMVKNHTFNGMPLPDIALLRKDGRCEVVKQ 364 Query: 357 FSYNDYYNNLS 367 F Y D+ LS Sbjct: 365 FGYKDFKERLS 375 >gi|222106820|ref|YP_002547611.1| carboxynorspermidine decarboxylase [Agrobacterium vitis S4] gi|221737999|gb|ACM38895.1| carboxynorspermidine decarboxylase [Agrobacterium vitis S4] Length = 365 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 213/367 (58%), Positives = 277/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M++TP+YLIDK KLL+N++ +R+ +G K LLALKCFA W +FD + YMDGTTSSSL Sbjct: 1 MLQTPFYLIDKSKLLSNMEKIALLRETSGAKALLALKCFATWSVFDLMRDYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YEV LG EKFGGETHAY+VAY D EID V+S+ D IIFN+V QL ++ DKA + GL Sbjct: 61 YEVRLGREKFGGETHAYSVAYGDNEIDEVISHADKIIFNSVGQLERYGDKASGIT--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + ++G M HNNCENK F F +ML Sbjct: 119 RLNPQVSSSSFDLADPARPFSRLGEWDAAKVEKVMDRISGFMIHNNCENKDFALFDSMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE +FG + + EW+SLGGGIHFT +DYP+ F +RLK FS +Y VQ+YLEPGEA +T Sbjct: 179 DIEAKFGSLLHRAEWVSLGGGIHFTGEDYPLAQFAERLKRFSGEYGVQVYLEPGEASITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL +VLD N KNL IVDSS+EAH+ D L+Y+E+A + PN G ++ M+CG+SCLAG Sbjct: 239 STTLEVSVLDTLYNGKNLAIVDSSIEAHMLDLLIYRETAKLEPNAGDHSYMICGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 D+FGEF F + +K+GDRIS +D AGY + +KNWFNG+ MP+IA++ +DG+I+ +REFSY Sbjct: 299 DVFGEFRFPEALKVGDRISIQDAAGYTMVKKNWFNGVKMPSIAIRELDGSIRTVREFSYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEQSLS 365 >gi|283798446|ref|ZP_06347599.1| carboxynorspermidine decarboxylase [Clostridium sp. M62/1] gi|291073852|gb|EFE11216.1| carboxynorspermidine decarboxylase [Clostridium sp. M62/1] Length = 395 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 132/370 (35%), Positives = 220/370 (59%), Gaps = 6/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TPY+LID+++L NL+ ++++ G ++LLA K F+ + + + +Y+ G+T+S LY Sbjct: 26 VSTPYFLIDEERLRKNLEILKKVQEDTGCRILLAQKAFSTFFAYPLIREYLAGSTASGLY 85 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E+FGGETH ++ AY++ E + +LS D ++FN+ SQL K+ ++A+ K +GLR Sbjct: 86 EARLGREEFGGETHVFSPAYREDEFEELLSYADHLVFNSPSQLRKYGERARAAGKSVGLR 145 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S + DP P SRLG ++ ES + ++GL FH CE S Sbjct: 146 VNPECSTQEGHAIYDPCAPGSRLGTTAENFDESLLPLLDGLHFHTLCEQNS-DALEQTAA 204 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 E++FG ++ ++W++LGGG H T DY V+ + + F + Y + +YLEPGEA+V N Sbjct: 205 AFEEKFGKYLGNMKWLNLGGGHHITRDDYDVERLERIISHFRDTYGLTVYLEPGEAVVLN 264 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296 L +TVL+ +N ++ I+D+S H+PD L + P +T + G + Sbjct: 265 AGFLVSTVLETVKNGIDIAILDTSAACHMPDVLEMPYRPPVSDSGLPGEKAFTFRLAGPT 324 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ G++ F+ P++ G ++ FED+A Y + + N FNG+ +P+I + +D I++ Sbjct: 325 CLAGDVIGDYSFDTPLEAGSQVVFEDMALYTMVKTNTFNGMALPSIVWRGLDKRETLIKK 384 Query: 357 FSYNDYYNNL 366 F Y D+ L Sbjct: 385 FGYEDFKGRL 394 >gi|126654279|ref|ZP_01726062.1| hypothetical protein BB14905_10510 [Bacillus sp. B14905] gi|126589268|gb|EAZ83428.1| hypothetical protein BB14905_10510 [Bacillus sp. B14905] Length = 379 Score = 276 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 142/372 (38%), Positives = 219/372 (58%), Gaps = 7/372 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++D++ L NL+ I+ G ++LLALK F+ F + +Y+ G T+SSL+ Sbjct: 9 VPSPSYVVDERLLTKNLELLKSIQDRTGCRILLALKGFSMHSTFPLVGEYLAGITASSLH 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIG 119 E LG+EK G E H Y AY + E+D +L D ++FN+ +Q +FKDK + + G Sbjct: 69 EARLGYEKMGKEVHVYAPAYIEHEMDELLGYVDHVVFNSFNQWAQFKDKVKSTGKTIECG 128 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S + L DP SRLG + +S++ ++GL FH CE S ++ Sbjct: 129 IRLNPEYSEIETALYDPCYTNSRLGTTLANFDKSQLDGIDGLHFHAMCEQNS-DTLERII 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + +E++FG + Q++W++ GGG H T +DY V+ + EKY++ +YLEPGEA+ Sbjct: 188 EVVEEKFGDVLHQMKWLNFGGGHHITREDYDVEKLVNIINYVQEKYNLLVYLEPGEAVAL 247 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGR 295 NT L TVLDI EN +L I+D+S H+PD L I N +T + G Sbjct: 248 NTGYLVATVLDIQENGMDLAILDTSATCHMPDVLEMPYRPMIIGSGQANEFAHTYRLGGL 307 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGD+ G++ FE+P+K GDR+ F D+A Y++ + + FNG+N+P+I N + IK IR Sbjct: 308 TCLAGDVIGDYSFEQPLKPGDRLVFTDMAHYSMVKNHMFNGVNLPSIVSYNDEEGIKIIR 367 Query: 356 EFSYNDYYNNLS 367 EF + DY LS Sbjct: 368 EFKFEDYSGRLS 379 >gi|306844972|ref|ZP_07477553.1| carboxynorspermidine decarboxylase [Brucella sp. BO1] gi|306274604|gb|EFM56393.1| carboxynorspermidine decarboxylase [Brucella sp. BO1] Length = 365 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 224/367 (61%), Positives = 276/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ +R+ +G K LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 1 MIQTPYYLIDKTKLKRNMEKIACVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA + GL Sbjct: 61 NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + + G M HNNCEN F F ML Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + ++EW+SLGGGIHFT +DYPV FC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEGSLS 365 >gi|104781480|ref|YP_607978.1| carboxynorspermidine decarboxylase NspC [Pseudomonas entomophila L48] gi|95110467|emb|CAK15175.1| carboxynorspermidine decarboxylase NspC [Pseudomonas entomophila L48] Length = 365 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 218/367 (59%), Positives = 284/367 (77%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDKQKLL N++ Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKQKLLGNMEKIAYVRQQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG +KF GETHAY+VA+ D E++ +L NCD IIFN++ QL +F + Q K GL Sbjct: 61 YELKLGRQKFAGETHAYSVAWADDEVEEMLENCDKIIFNSIGQLERFAE--QSEGKVRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE +KIE I+ ++G MFHNNCEN F F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPEKIEKVIEKISGFMFHNNCENGDFSLFDKMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE+ FGH + ++EW+SLGGGIHFT +DY V FC RLK F+EKY+VQ+YLEPGEA +TN Sbjct: 179 HIEERFGHLLHKVEWVSLGGGIHFTGEDYAVDAFCARLKAFAEKYAVQVYLEPGEAAITN 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N K+L +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIYRLNAKMAPNDGAHTYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F+KP++IGDR+SF D AGY + +KNWFNG+ MP+IAVK +DG+++ +REF ++ Sbjct: 299 DIFGEYQFDKPLQIGDRLSFVDTAGYTMVKKNWFNGLKMPSIAVKQLDGSVEVVREFGFD 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYVSSLS 365 >gi|302337429|ref|YP_003802635.1| carboxynorspermidine decarboxylase [Spirochaeta smaragdinae DSM 11293] gi|301634614|gb|ADK80041.1| carboxynorspermidine decarboxylase [Spirochaeta smaragdinae DSM 11293] Length = 387 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 126/373 (33%), Positives = 201/373 (53%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++DK + NL I+K +G ++LLA K F+ + ++ ++Q + G +S LY Sbjct: 16 VPSPCFVVDKAAIRRNLAILDSIQKTSGARILLAQKGFSMFSLYPMISQTLKGVCASGLY 75 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--DKAQKLHKKIG 119 E LG E FG E H Y+ A+ + + +L D ++FN+ SQ +F+ G Sbjct: 76 EAKLGREAFGKEVHTYSPAFVPEQFETILELSDHVVFNSFSQWKRFRSSCLPFAGRVSCG 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP VS + L DP+ P SRLG + + + GL FH CE + +L Sbjct: 136 IRVNPEVSTAAVRLYDPSAPGSRLGVTAAEFRPELLDGIEGLHFHALCEQNADD-LERVL 194 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 K FG + ++ WI+ GGG H T DY C+ ++E S++Y V +YLEPGEA+ Sbjct: 195 KGFHHSFGTWAGRMRWINFGGGHHITRNDYDRALLCRLIEECSDRYGVDVYLEPGEAVAL 254 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 N+ L TVLDI N + ++D+S H+PD L I P YT + G Sbjct: 255 NSGVLVATVLDIVRNDGRIALLDTSAATHMPDVLEMPYRPEIAGAGKPGEKRYTYRLGGS 314 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV-DGTIKAI 354 SCLAGD+ G + F+ P++ G R+ F D+A Y++ + FNG+ +P IA + GT++ + Sbjct: 315 SCLAGDVIGTYSFDTPLEPGSRLVFGDMAHYSMVKTTTFNGVPLPAIATYDSATGTLEVV 374 Query: 355 REFSYNDYYNNLS 367 ++F + D+ LS Sbjct: 375 KQFGFEDFRERLS 387 >gi|49474810|ref|YP_032852.1| carboxynorspermidine decarboxylase [Bartonella quintana str. Toulouse] gi|49240314|emb|CAF26796.1| Carboxynorspermidine decarboxylase [Bartonella quintana str. Toulouse] Length = 365 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 205/367 (55%), Positives = 267/367 (72%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL+ N++ +R+ +G K+LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 1 MIRTPYYLIDKSKLIRNMEIITRVREMSGAKILLALKCFATWSLFDLMSEYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID V + D IIFN++ QL +F + GL Sbjct: 61 YELRLGREKFGKETHAYSVAWADDEIDEVCNYADKIIFNSIQQLQRFSK--TPKTIQRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LA+P+RPFSRLGE + I+ + +NGLM HNNCEN F F+ ML Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQSAIKKVLPLINGLMIHNNCENADFNLFNKMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 ++E++F ++WISLGGGIHFT ++YP++ F +RLK FS+ Y V I+LEPGEA +T Sbjct: 179 HMEEQFAELFAAVDWISLGGGIHFTAENYPLETFAERLKHFSKTYGVTIFLEPGEAAITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL +VLD EN K L IVDSS EAH+ D L+Y+E+A + PN GP+ MVCG+SCLAG Sbjct: 239 STTLEVSVLDTLENEKKLAIVDSSTEAHMLDLLIYRENAKLEPNQGPHEIMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG F F +P+KIGDR+SF+D AGY + +KNWFNG+ MP I VK G + R+FSYN Sbjct: 299 DIFGTFRFPEPLKIGDRLSFQDAAGYTMVKKNWFNGLQMPAIVVKECSGALIIQRQFSYN 358 Query: 361 DYYNNLS 367 DY +LS Sbjct: 359 DYQKSLS 365 >gi|239831198|ref|ZP_04679527.1| carboxynorspermidine decarboxylase [Ochrobactrum intermedium LMG 3301] gi|239823465|gb|EEQ95033.1| carboxynorspermidine decarboxylase [Ochrobactrum intermedium LMG 3301] Length = 365 Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats. Identities = 222/367 (60%), Positives = 277/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 1 MIQTPYYLIDKTKLKRNMEKVAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHE+FGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA + GL Sbjct: 61 NEVRLGHERFGGETHAYSVAYADNEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LADP RPFSRLGE K+E + V G M HNNCEN F F ML Sbjct: 119 RLNPGISSSSFDLADPARPFSRLGEWDVAKVEKVMDRVTGFMIHNNCENSDFGLFDRMLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + ++EW+SLGGGIHFT DYPV +FC RLK FSEK+ +Q+YLEPGEA +T Sbjct: 179 DIEQKFGSLLNRVEWVSLGGGIHFTGDDYPVDEFCARLKAFSEKFGIQVYLEPGEASITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGEHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT++ +REF Y Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVRVVREFDYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEGSLS 365 >gi|308273729|emb|CBX30331.1| hypothetical protein N47_D31400 [uncultured Desulfobacterium sp.] Length = 379 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 147/372 (39%), Positives = 218/372 (58%), Gaps = 7/372 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++++ L NL ++K G ++++ALK FA + +F + QY+ G ++SS Sbjct: 9 ISTPCYILEEEALERNLKILDSVQKQTGARIIMALKGFAMFSVFPLIRQYLSGISASSAD 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIG 119 E LG+E+FG + H + AY D E + +L+ D I+FN+ SQ F A K G Sbjct: 69 EARLGYEEFGSKVHVCSPAYSDSEFNEILNYADYIVFNSFSQWRHFKADVTASKKKILCG 128 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RINP S + + DP FSRLG + E E+ ++G+ FHN CE S L Sbjct: 129 IRINPEYSEVRTTIYDPCGQFSRLGTTRDNFKEDELDGISGIHFHNLCELNSDSLLRT-L 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 K +E++FG F +++WI+ GGG H T KDY VK C + +F +++ + +YLEPGEAI Sbjct: 188 KVVEEKFGLFFNRLKWINFGGGHHITRKDYDVKLLCDLINDFKKRHPLDVYLEPGEAIAL 247 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295 N L T+V+DI N N+ I+D+S H+PD L I P +T + G Sbjct: 248 NAGVLETSVVDIIYNKMNIAILDTSAATHMPDVLEMPYRPNITGAGLPGEYRHTYRLGGV 307 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGDI G++ F +P+K G RI FED+A Y + + N FNGI +P+IA+K+ G I+ I+ Sbjct: 308 TCLAGDIIGDYSFPEPLKTGSRIVFEDMAHYTMVKNNTFNGIRLPSIAIKDKSGDIRIIK 367 Query: 356 EFSYNDYYNNLS 367 +F Y DY N LS Sbjct: 368 KFGYEDYKNRLS 379 >gi|260889302|ref|ZP_05900565.1| carboxynorspermidine decarboxylase [Leptotrichia hofstadii F0254] gi|260860713|gb|EEX75213.1| carboxynorspermidine decarboxylase [Leptotrichia hofstadii F0254] Length = 395 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 134/383 (34%), Positives = 225/383 (58%), Gaps = 18/383 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP +++D++ L NL+T + G K+LLA K F+ + + +++Y++GTT+SSL+ Sbjct: 14 LPTPAFIVDERLLKRNLETLKSVIDRTGCKILLAQKGFSMFYFYPLISEYLNGTTASSLF 73 Query: 62 EVMLGHEKF-------GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ-- 112 E LG+E+ ETH +N +Y++ E D ++ + I+FN+ +Q KFK + + Sbjct: 74 EARLGYEEMELKNPNKKLETHIFNPSYREDEFDEIMEITNHIVFNSFNQWKKFKSRVREF 133 Query: 113 ----KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 GLR+NP S + + +P FSR G ++ E+E++ ++G FH CE Sbjct: 134 EEKSDKKISCGLRLNPEFSEVETEIYNPAGRFSRFGVTLENFKENELEGLDGFHFHALCE 193 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 S +L+ E++FG ++ ++W++ GGG H T +DY ++ + + EKY V+ Sbjct: 194 QNS-DALENVLRIFEEKFGKYLHNMKWLNFGGGHHITREDYDIEKLVKCINYIKEKYDVE 252 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPN 284 +YLEPGEA+ NT L + VLDI++N +++++D+S H+PD + I N Sbjct: 253 VYLEPGEAVALNTGFLVSEVLDITKNEMDILLMDTSASCHMPDVIEMPYRPFIFGSGMSN 312 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 YT + G +CLAGD+ G++ F+ PVK+GD++ F D+A Y++ + N FNGIN+P IAV Sbjct: 313 EKKYTYRLGGPTCLAGDVIGDYSFDDPVKVGDKLIFTDMAHYSMVKTNTFNGINLPVIAV 372 Query: 345 KNVDGTIKAIREFSYNDYYNNLS 367 G ++ IR+F Y D+ N LS Sbjct: 373 YTEKGGVEVIRKFEYEDFRNRLS 395 >gi|150376298|ref|YP_001312894.1| carboxynorspermidine decarboxylase [Sinorhizobium medicae WSM419] gi|150030845|gb|ABR62961.1| carboxynorspermidine decarboxylase [Sinorhizobium medicae WSM419] Length = 365 Score = 275 bits (703), Expect = 8e-72, Method: Composition-based stats. Identities = 210/367 (57%), Positives = 273/367 (74%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL+ N++ ++R+ +G K LLALKCFA W +FD + YMDGTTSSSL Sbjct: 1 MIETPYYLIDKSKLIRNMEKIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +EV LG EKFG ETHAY+VAY D EID V+ + D IIFN++SQL ++ ++A GL Sbjct: 61 FEVRLGREKFGKETHAYSVAYGDNEIDEVVLHADKIIFNSISQLERYAERA--AGIARGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + +NG M HNNCENK+F F +L Sbjct: 119 RLNPQVSSSSFDLADPARPFSRLGEWDVAKVERVMDRINGFMIHNNCENKNFDLFDCLLA 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+ FG + + +W+SLGGGIHFT DYPV F RL+ FS++Y VQ+YLEPGEA +T Sbjct: 179 QIEERFGSLLERADWVSLGGGIHFTGDDYPVDTFSARLRAFSDRYDVQVYLEPGEASITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL TVLD N KNL IVDSS+EAH+ D L+Y+E+A + PN GP++ M+CG+SCLAG Sbjct: 239 STTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIYRETAKVSPNEGPHSYMICGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 D+FGEF F +K+GDRISF+D AGY + +KNWFNG+ MP IA+K +DG+++ +REF+Y Sbjct: 299 DVFGEFRFADALKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIKELDGSVRTVREFTYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEKSLS 365 >gi|16265298|ref|NP_438090.1| putative carboxynorspermidine decarboxylase protein [Sinorhizobium meliloti 1021] gi|307316795|ref|ZP_07596237.1| carboxynorspermidine decarboxylase [Sinorhizobium meliloti AK83] gi|15141438|emb|CAC49950.1| putative carboxynorspermidine decarboxylase protein [Sinorhizobium meliloti 1021] gi|306897417|gb|EFN28161.1| carboxynorspermidine decarboxylase [Sinorhizobium meliloti AK83] Length = 365 Score = 275 bits (703), Expect = 8e-72, Method: Composition-based stats. Identities = 215/367 (58%), Positives = 273/367 (74%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ ++R+ +G K LLALKCFA W +FD + YMDGTTSSSL Sbjct: 1 MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +EV LG E+FG ETHAY+VAY D EID V+S+ D IIFN++SQL +F DKA GL Sbjct: 61 FEVRLGRERFGKETHAYSVAYGDNEIDEVVSHADKIIFNSISQLERFADKA--AGIARGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + +NG M HNNCENK F F ML Sbjct: 119 RLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVMDRINGFMIHNNCENKDFGLFDRMLG 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+ FG I +++W+SLGGGIHFT DYPV F RL+ FS++Y VQIYLEPGEA +T Sbjct: 179 EIEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLRAFSDRYGVQIYLEPGEASITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL TVLD N KNL IVDSS+EAH+ D L+Y+E+A + PN G ++ M+CG+SCLAG Sbjct: 239 STTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIYRETAKVLPNEGSHSYMICGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 D+FGEF F + +K+GDRISF+D AGY + +KNWFNG+ MP IA++ +DG+++ +REF+Y Sbjct: 299 DVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYA 358 Query: 361 DYYNNLS 367 DY +LS Sbjct: 359 DYEQSLS 365 >gi|299537795|ref|ZP_07051084.1| carboxynorspermidine decarboxylase [Lysinibacillus fusiformis ZC1] gi|298726774|gb|EFI67360.1| carboxynorspermidine decarboxylase [Lysinibacillus fusiformis ZC1] Length = 379 Score = 275 bits (703), Expect = 9e-72, Method: Composition-based stats. Identities = 144/372 (38%), Positives = 218/372 (58%), Gaps = 7/372 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++D++ L NL+ I+ G ++LLALK F+ F + +Y+ G TSSSL+ Sbjct: 9 VPSPSYVVDERLLTKNLELLKSIQDRTGCRILLALKGFSMHSTFPLVGEYLAGITSSSLH 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIG 119 E LG+EK G E H Y AY + E+D +L D I+FN+ +Q +FKDK + + G Sbjct: 69 EARLGYEKMGKEVHVYAPAYIEHEMDELLGYVDHIVFNSFNQWAQFKDKVKSAGKTIECG 128 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S + L DP SRLG + +S++ ++GL FH CE S ++ Sbjct: 129 IRVNPEYSEIETALYDPCYTNSRLGTTLANFDKSQLDGIDGLHFHAMCEQNS-DTLERII 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + +E++FG + Q++W++ GGG H T DY V+ + EKY++ +YLEPGEA+ Sbjct: 188 EVVEEKFGDVLHQMKWLNFGGGHHITRDDYDVEKLVNIINYIQEKYNLLVYLEPGEAVAL 247 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGR 295 NT L TVLDI EN +L I+D+S H+PD L I N +T + G Sbjct: 248 NTGYLVATVLDIQENGMDLAILDTSATCHMPDVLEMPYRPMIIGSGQANELAHTYRLGGL 307 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGD+ G++ FE+P+K GDR+ F D+A Y++ + + FNG+N+P+I N + IK IR Sbjct: 308 TCLAGDVIGDYSFEQPLKPGDRLVFTDMAHYSMVKNHMFNGVNLPSIVSYNDEEGIKVIR 367 Query: 356 EFSYNDYYNNLS 367 EF + DY LS Sbjct: 368 EFKFEDYSGRLS 379 >gi|330809265|ref|YP_004353727.1| carboxynorspermidine decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377373|gb|AEA68723.1| carboxynorspermidine decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 365 Score = 275 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 212/367 (57%), Positives = 277/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDKQKLL N+ Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKQKLLANMQKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG +KF GETHAY+VA+ D EI+ +L+NCD IIFN++ QL ++ + + K GL Sbjct: 61 YELKLGRQKFAGETHAYSVAWADDEIEEMLANCDKIIFNSIGQLQRYTEAS--AGKVRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE KIE I++++G MFHNNCEN F F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPVKIEQVIEHISGFMFHNNCENGDFGLFDQMLG 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+ FGH + ++EW+SLGGGIHFT + Y + FC RLK FS+KY VQ+YLEPGEA +T Sbjct: 179 TIEERFGHLLHKVEWVSLGGGIHFTGEGYALDAFCARLKAFSQKYGVQVYLEPGEAAITQ 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N K+L +VDSS+EAH+ D L+Y+ A + P+ G +T MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHMLDLLIYRLDAKMAPSEGEHTYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +REF Y+ Sbjct: 299 DIFGEYQFDRPLSIGDRLSFIDAAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVREFVYD 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYLSSLS 365 >gi|171912952|ref|ZP_02928422.1| carboxynorspermidine decarboxylase [Verrucomicrobium spinosum DSM 4136] Length = 386 Score = 275 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 129/374 (34%), Positives = 205/374 (54%), Gaps = 9/374 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D L NL +++ +G K+LLALK F+ + F + +Y+ G +S L Sbjct: 14 VATPAYVVDLALLKKNLTLLHEVQEASGAKILLALKGFSMFSTFGLVREYLHGCCASGLN 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---AQKLHKKI 118 E +L H +FG E H Y A+K+ E++ +L I FN+++Q +FK A+ Sbjct: 74 EALLAHHEFGKEVHVYCPAFKEAEMEQILPIACHISFNSLAQWQRFKPVLEGAEGNRPSP 133 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 GLR+NP +S + L DP P RLG + + +++ + GL FH CE S + Sbjct: 134 GLRVNPELSTVEVALYDPCSPGCRLGTRDVELEGADLTGLEGLHFHALCEQNS-DVLERV 192 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 ++++E+ F F+ Q++W+++GGG H T Y V+ + +K F E++ V++YLEPGEAI Sbjct: 193 IESVERRFPKFLKQVKWVNMGGGHHITKPGYDVERLVRIVKAFRERHDVEVYLEPGEAIA 252 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCG 294 NT L T+VLDI + I+D+S H+PD L I P YT + G Sbjct: 253 LNTGYLVTSVLDIVGAEEKTAILDTSATCHMPDVLEMPYRPQIIGAGLPGEHGYTYKLGG 312 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKA 353 SCLAGD+ G + F +P+ +G ++ F D+ Y + + FNG+ P I + G ++ Sbjct: 313 TSCLAGDVIGAYSFPEPLHLGQKLIFTDMGHYTMVKTTTFNGVPHPDIDTYDPATGELRV 372 Query: 354 IREFSYNDYYNNLS 367 +R F Y D+ N LS Sbjct: 373 VRRFGYEDFRNRLS 386 >gi|304311735|ref|YP_003811333.1| Carboxynorspermidine decarboxylase [gamma proteobacterium HdN1] gi|301797468|emb|CBL45688.1| Carboxynorspermidine decarboxylase [gamma proteobacterium HdN1] Length = 384 Score = 275 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 130/378 (34%), Positives = 195/378 (51%), Gaps = 13/378 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +++P Y++D+ L NL + ++AGV++++A K FA W F + +Y+ G T+SS + Sbjct: 8 VESPCYVLDEALLRQNLQLIRSVAESAGVEIIVAFKGFAMWSAFPVVREYVRGATASSPH 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------H 115 E L E+ H Y+ AY + E D + I FN+++Q +F+ +K H Sbjct: 68 EARLAFEEMKTLAHTYSPAYVEREFDEICQFSSHITFNSLAQFERFQPLVKKFEQQAGRH 127 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 GLRINP + L +P P SRLG + + + GL FH CE+ SF Sbjct: 128 ISFGLRINPEFAVVATDLYNPCAPGSRLGIAVDHLPKQLPEGIEGLHFHALCESNSFD-L 186 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 L IE++FGH + QI+W ++GGG T K Y V + L F EK+ ++I LEPG Sbjct: 187 ENALAEIERKFGHLLPQIQWFNMGGGHLMTRKGYDVAHLIRVLTAFREKWGLKIILEPGS 246 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPY-----T 289 A +T L + V+DI EN + D S AH+PD L I T Sbjct: 247 AFAWDTGVLVSQVVDIVENQGIKTAILDVSFTAHMPDCLEMPYKPRIRGAHQEPVANLPT 306 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 + G SCL+GD G++ F P+K+GD I FED+ Y + + FNG+ P+IA+ Sbjct: 307 YRIGGNSCLSGDFIGDWSFGAPLKVGDTIVFEDMIHYTMVKTTTFNGVPHPSIAIWRDGQ 366 Query: 350 TIKAIREFSYNDYYNNLS 367 ++ +R F+Y DY N LS Sbjct: 367 GLQVVRRFTYEDYRNRLS 384 >gi|257125605|ref|YP_003163719.1| carboxynorspermidine decarboxylase [Leptotrichia buccalis C-1013-b] gi|257049544|gb|ACV38728.1| carboxynorspermidine decarboxylase [Leptotrichia buccalis C-1013-b] Length = 395 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 141/383 (36%), Positives = 230/383 (60%), Gaps = 18/383 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP +++D++ L NL+T + G K+LLA K F+ + + +++Y++GTT+SSL+ Sbjct: 14 LPTPAFIVDERLLKRNLETLKSVIDRTGCKILLAQKGFSMFYFYLLISEYLNGTTASSLF 73 Query: 62 EVMLGHEKF-------GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E LG+E+ ETH +N +Y+D E D ++ + I+FN+ +Q KFK K ++ Sbjct: 74 EARLGYEEMELKNPGKKLETHIFNPSYRDDEFDEIMEITNHIVFNSFNQWKKFKSKVKEF 133 Query: 115 HKK------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 +K GLR+NP S + + +P FSR G ++ E EI+ ++G FH CE Sbjct: 134 EEKNGKKISCGLRLNPEFSEVETEIYNPAGRFSRFGVTLENFKEDEIEGLDGFHFHALCE 193 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 S +LK E++FG ++ ++W++ GGG H T +DY ++ + + EKY+V+ Sbjct: 194 QNS-DALENVLKIFEQKFGKYLYNMKWLNFGGGHHITREDYDIEKLVKCINYIKEKYNVE 252 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPN 284 +YLEPGEA+ NT L + VLDI++N +++++D+S H+PD + I PN Sbjct: 253 VYLEPGEAVALNTGFLVSEVLDITKNEMDILLMDTSASCHMPDVIEMPYRPFIFGSGMPN 312 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 YT + G +CLAGDI G++ F++PVK+GD++ F D+A Y++ + N FNGIN+P IAV Sbjct: 313 EKKYTYRLGGPTCLAGDIIGDYSFDEPVKVGDKLIFTDMAHYSMVKTNTFNGINLPVIAV 372 Query: 345 KNVDGTIKAIREFSYNDYYNNLS 367 G ++ IR+F Y D+ N LS Sbjct: 373 YTEKGGVEVIRKFEYEDFRNRLS 395 >gi|315185867|gb|EFU19632.1| carboxynorspermidine decarboxylase [Spirochaeta thermophila DSM 6578] Length = 385 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 124/373 (33%), Positives = 208/373 (55%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ + NL +++ +G ++LLALK FA W + ++ Y+ GT +S ++ Sbjct: 14 VPSPCFVVDRDAVEENLKILDRVQRESGARVLLALKGFAMWSLAPLVSSYLSGTCASGVW 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--G 119 E LG E FGG Y AYK+ E+ +L+ D +IFN+ +Q +F+ +++ G Sbjct: 74 EARLGRECFGGIVSTYGPAYKEEEVRELLTLTDHLIFNSFAQWERFRSLLGTAPRRVEAG 133 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S + + DP+ P SRLG + ++GL FH CE +L Sbjct: 134 IRVNPERSGAPAAIYDPSGPNSRLGVVRSRFRPELLDGISGLHFHTLCEQN-VDALETVL 192 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + E+ FG F+ ++ W++ GGG H T DY V +K+F +Y V +YLEPGEAI Sbjct: 193 QAFEERFGEFVPRMRWVNWGGGHHITRPDYDVDRLIDLVKDFRSRYGVDVYLEPGEAIAL 252 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 T L V+DI EN + ++D+S H+PD L ++ P PYT + G Sbjct: 253 GTGVLVAEVVDIVENGMRIAVLDTSATTHMPDVLEMPYRPEVWGAGLPGERPYTYRLGGV 312 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK-NVDGTIKAI 354 SCLAGD+ G++ F++P+++GDR+ F+D+A Y + + FNG+ +P+I + + + + + Sbjct: 313 SCLAGDVIGDYSFDRPLEVGDRLVFDDMAHYTMVKTTTFNGVKLPSIGIWSSKEQSFTLV 372 Query: 355 REFSYNDYYNNLS 367 R F Y ++ LS Sbjct: 373 RSFGYEEFKRRLS 385 >gi|256159037|ref|ZP_05456870.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M490/95/1] gi|256254391|ref|ZP_05459927.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti B1/94] gi|261221555|ref|ZP_05935836.1| carboxynorspermidine decarboxylase [Brucella ceti B1/94] gi|265997518|ref|ZP_06110075.1| carboxynorspermidine decarboxylase [Brucella ceti M490/95/1] gi|260920139|gb|EEX86792.1| carboxynorspermidine decarboxylase [Brucella ceti B1/94] gi|262551986|gb|EEZ07976.1| carboxynorspermidine decarboxylase [Brucella ceti M490/95/1] Length = 365 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 224/367 (61%), Positives = 276/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ Y+R+ +G K LLALKCFA W +FD +++YMD TTSSSL Sbjct: 1 MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDSTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA + GL Sbjct: 61 NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + + G M HNNCEN F F ML Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + ++EW+SLGGGIHFT +DYPV FC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEGSLS 365 >gi|330504767|ref|YP_004381636.1| carboxynorspermidine decarboxylase [Pseudomonas mendocina NK-01] gi|328919053|gb|AEB59884.1| carboxynorspermidine decarboxylase [Pseudomonas mendocina NK-01] Length = 365 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 217/367 (59%), Positives = 280/367 (76%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDKQKLL NL+ Y+R+N+G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIQTPYYLIDKQKLLVNLEKIAYVRENSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG +KF GETHAY+VA+ D EI+ +++NCD IIFN++ QL +F A+ GL Sbjct: 61 YELKLGRQKFAGETHAYSVAWADDEIEEMVANCDKIIFNSIGQLERF--AARTEGTIRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE KIE + ++G MFHNNCEN SF F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEQVMGQISGFMFHNNCENGSFELFDKMLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+ FGH I Q+EW+SLGGGIHFT + YP+ FC RLK FSEKY VQ+YLEPGEA +T Sbjct: 179 TIEERFGHLIAQVEWVSLGGGIHFTGEGYPIDAFCARLKAFSEKYGVQVYLEPGEAAITL 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N K+L +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHMLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F+KP++IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +R+F ++ Sbjct: 299 DIFGEYQFDKPLQIGDRLSFVDAAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVRQFEFD 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYLSSLS 365 >gi|149912637|ref|ZP_01901171.1| carboxynorspermidine decarboxylase [Roseobacter sp. AzwK-3b] gi|149813043|gb|EDM72869.1| carboxynorspermidine decarboxylase [Roseobacter sp. AzwK-3b] Length = 389 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 116/368 (31%), Positives = 195/368 (52%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ + NL + + +G ++L ALK F+ + + + Y+ GT +S L+ Sbjct: 23 VPSPCFVVDEVAIEANLKALADVGERSGARMLSALKAFSMFSLAPLVRTYLSGTCASGLF 82 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E++GGE ++ YK EID ++ D ++FN+ +Q ++F +A +GLR Sbjct: 83 EARLGREEYGGEVTTFSTGYKPSEIDEIIQLSDHLVFNSPAQKDRFGPRAAAAGVSVGLR 142 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + DP +P SRLG + ++ V GL H CE F + Sbjct: 143 INPQHSEGEVPKYDPCQPCSRLGFPVTQLDATTLEGVEGLHMHTLCEQG-FEPLARTWAA 201 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E ++ Q++WI+LGGG H T DY + +++ ++ V++YLEPGEA+ + Sbjct: 202 VEPLIAPYLGQLKWINLGGGHHITRDDYDREALIAFIRDLRTRHGVEVYLEPGEAVALDA 261 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN-TGPYTAMVCGRSCLAG 300 L +LD N + I D S H+PD + + +T + G SCLAG Sbjct: 262 GILVGEILDTFHNTMPIAITDISATCHMPDVIEAPYRPALLDEADAGHTYRLGGPSCLAG 321 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV-DGTIKAIREFSY 359 DI G++ + P++IG R +F D A Y++ + N FNG+ +P IA+ N ++ +R+F Y Sbjct: 322 DIIGDYTWAAPLEIGQRFAFLDQAHYSMVKTNTFNGVPLPAIALWNSRTDDLRIVRDFGY 381 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 382 QDFKERLS 389 >gi|307301480|ref|ZP_07581240.1| carboxynorspermidine decarboxylase [Sinorhizobium meliloti BL225C] gi|306903537|gb|EFN34125.1| carboxynorspermidine decarboxylase [Sinorhizobium meliloti BL225C] Length = 365 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 215/367 (58%), Positives = 273/367 (74%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ ++R+ +G K LLALKCFA W +FD + YMDGTTSSSL Sbjct: 1 MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +EV LG E+FG ETHAY+VAY D EID V+S+ D IIFN++SQL +F DKA GL Sbjct: 61 FEVRLGRERFGKETHAYSVAYGDNEIDDVVSHADKIIFNSISQLERFADKA--AGIARGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + +NG M HNNCENK F F ML Sbjct: 119 RLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVMDRINGFMIHNNCENKDFGLFDRMLG 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+ FG I +++W+SLGGGIHFT DYPV F RL+ FS++Y VQIYLEPGEA +T Sbjct: 179 EIEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLRAFSDRYGVQIYLEPGEASITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL TVLD N KNL IVDSS+EAH+ D L+Y+E+A + PN G ++ M+CG+SCLAG Sbjct: 239 STTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIYRETAKVLPNEGSHSYMICGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 D+FGEF F + +K+GDRISF+D AGY + +KNWFNG+ MP IA++ +DG+++ +REF+Y Sbjct: 299 DVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYA 358 Query: 361 DYYNNLS 367 DY +LS Sbjct: 359 DYEQSLS 365 >gi|167753612|ref|ZP_02425739.1| hypothetical protein ALIPUT_01891 [Alistipes putredinis DSM 17216] gi|167658237|gb|EDS02367.1| hypothetical protein ALIPUT_01891 [Alistipes putredinis DSM 17216] Length = 376 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 8/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+Q L NL +R+ +G ++++ALK A W +F L Q+ DG T+SSL Sbjct: 7 LPSPCFVLDEQLLDRNLAVIDRVRRESGAEVIVALKACAMWSIFPELAQHSDGATASSLA 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+FG H Y Y D I+ +L D I FN+V+Q +F A GLR Sbjct: 67 EARLVFEEFGRPAHTYAPVYTDRNIEEILDCSDHITFNSVAQFERFGQMALLRGISCGLR 126 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + L +P P SRLG + + V GL FH CE++ L Sbjct: 127 INPGYSPVETDLYNPCVPGSRLGIPAGEL-KELPAGVEGLHFHVLCESR-PEHLRLALDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 +EK FG F+ +I+W+++GGG T KDY + + L+EF KY ++ LEPG A Sbjct: 185 VEKRFGRFLDRIKWLNMGGGHLMTHKDYDCDELIRILQEFKAKYPNLRLILEPGSAFTWR 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYPNTGPYT----AMVCGR 295 T L +TV DI EN + H+PD L I P + G Sbjct: 245 TGYLVSTVEDIVENGGVRTAMLDVSFACHMPDCLEMPYKPAILGARDPEPGEKGWRMGGN 304 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 SCLAGD +G++ F++ +++GDRI FED+ Y + + FNG+ P IA+ DG I+ IR Sbjct: 305 SCLAGDYYGDWIFDRDLRVGDRIVFEDMIHYTMVKTTMFNGVAHPAIAIVRRDGAIEIIR 364 Query: 356 EFSYNDYYNNLS 367 EF Y D+ + +S Sbjct: 365 EFGYEDFKSRMS 376 >gi|310641295|ref|YP_003946053.1| carboxynorspermidine decarboxylase [Paenibacillus polymyxa SC2] gi|309246245|gb|ADO55812.1| Carboxynorspermidine decarboxylase [Paenibacillus polymyxa SC2] Length = 379 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 144/373 (38%), Positives = 219/373 (58%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P YL+D++ L+ NL+ +++ G +LLALK F+ + F + +Y+ G TSSSL+ Sbjct: 8 LPSPCYLVDERLLVKNLEVLNSVQERTGCSILLALKGFSMFSTFPLVGKYLKGVTSSSLF 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ---KLHKKI 118 E LG EK E H Y AY D E D +L D I+FN+ QLN+FK + Q I Sbjct: 68 EARLGREKMDKEVHVYAPAYVDSEFDELLEYVDHIVFNSFDQLNRFKSRVQGVTSKKIDI 127 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 G+R+NP S + L DP SR+G + ++ V+G+ FH CE S Sbjct: 128 GIRVNPEYSEIETPLYDPCYNNSRMGVTLANFRPEDLDGVDGIHFHTMCEQNS-DTLERT 186 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +K ++++FG +I Q++W++ GGG H T +DY + + ++ F +KY VQ+YLEPGEAI Sbjct: 187 IKVVDEKFGPYIKQMKWLNFGGGHHITREDYDLDTLVRCIQYFQDKYGVQVYLEPGEAIA 246 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCG 294 NT L TVLD +N ++ I+D+S E H+PD L I P +T + G Sbjct: 247 LNTGYLVATVLDTMKNGMDIAILDTSAECHMPDVLAMPYRPNIIGAGKPGEYAHTYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +CLAGD+ G++ F++P+K GD++ F D+A Y + + + FNG+N+P IA N + IK I Sbjct: 307 LTCLAGDVIGDYSFKEPLKPGDKLVFCDMAHYTMVKNHMFNGVNLPAIASYNDEEGIKVI 366 Query: 355 REFSYNDYYNNLS 367 R+FSY D+ + LS Sbjct: 367 RQFSYEDFSSRLS 379 >gi|331082380|ref|ZP_08331506.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium 6_1_63FAA] gi|330400866|gb|EGG80467.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium 6_1_63FAA] Length = 378 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 136/369 (36%), Positives = 218/369 (59%), Gaps = 6/369 (1%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TPY+L+D+++LL+NL+ + + +G K+LLA K F+ + + + +Y+ GTT+S LYE Sbjct: 11 TPYFLVDEKRLLHNLEILKSVSEKSGCKILLAQKAFSMFYAYPLMREYLAGTTASGLYEA 70 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 LG E+FG ETH ++ AY++ E D +L D ++FN+ +Q KF KA+ K +GLRIN Sbjct: 71 KLGCEEFGKETHVFSPAYREKEFDEILKYADDVVFNSPTQFKKFAKKAKAAGKSVGLRIN 130 Query: 124 PSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 P S + DP FSRLG ++ E + ++GL FH CE LK + Sbjct: 131 PQCSTQEGHAIYDPCADFSRLGTTLENFEEELLSELDGLHFHTLCEQG-ADALEITLKAV 189 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 E++FG ++ Q++W++LGGG H T DY V+ + ++ E Y V++YLEPGEA+V + Sbjct: 190 EEKFGKYLYQMKWLNLGGGHHITKADYDVEALIRMVRHLKETYDVEVYLEPGEAVVLDAG 249 Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRSCL 298 L + VL++ N ++ I+D+S H+PD L + T + G +CL Sbjct: 250 FLVSQVLEVVHNGMDIAILDTSAACHMPDVLEMPYRPPVKDSGLAGEKACTVRLAGPTCL 309 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 AGD+ G++ F+ P+K GD + FED+A Y + + N FNG+ +P I ++ +G +K ++ F Sbjct: 310 AGDVMGDYSFDAPLKEGDLVVFEDMALYTMVKTNTFNGMPLPDIVWRDRNGEMKLVKSFG 369 Query: 359 YNDYYNNLS 367 Y D+ LS Sbjct: 370 YEDFKGRLS 378 >gi|295090770|emb|CBK76877.1| carboxynorspermidine decarboxylase [Clostridium cf. saccharolyticum K10] Length = 395 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 132/370 (35%), Positives = 219/370 (59%), Gaps = 6/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TPY+LID+++L NL+ ++++ G ++LLA K F+ + + + +Y+ G+T+S LY Sbjct: 26 VSTPYFLIDEERLRKNLEILKKVQEDTGCRILLAQKAFSTFFAYPLIREYLAGSTASGLY 85 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E+FGGETH ++ AY++ E + +LS D ++FN+ SQL K+ ++A+ K +GLR Sbjct: 86 EARLGREEFGGETHVFSPAYREDEFEELLSYADHLVFNSPSQLRKYGERARAAGKSVGLR 145 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S + DP P SRLG ++ ES + ++GL FH CE S Sbjct: 146 VNPECSTQEGHAIYDPCAPGSRLGTTAENFDESLLPLLDGLHFHTLCEQNS-DALEQTAA 204 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 E++FG ++ ++W++LGGG H T DY V+ + + F + Y + +YLEPGEA+V N Sbjct: 205 AFEEKFGKYLGNMKWLNLGGGHHITRDDYDVERLERIISHFRDTYGLTVYLEPGEAVVLN 264 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296 L +TVL+ +N ++ I+D+S H+PD L + P +T + G + Sbjct: 265 AGFLVSTVLETVKNGIDIAILDTSAACHMPDVLEMPYRPPVSDSGLPGEKAFTFRLAGPT 324 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ G++ F+ P+ G ++ FED+A Y + + N FNG+ +P+I + +D I++ Sbjct: 325 CLAGDVIGDYSFDTPLGAGSQVVFEDMALYTMVKTNTFNGMALPSIVWRGLDKRETLIKK 384 Query: 357 FSYNDYYNNL 366 F Y D+ L Sbjct: 385 FGYEDFKGRL 394 >gi|260588051|ref|ZP_05853964.1| carboxynorspermidine decarboxylase [Blautia hansenii DSM 20583] gi|260541578|gb|EEX22147.1| carboxynorspermidine decarboxylase [Blautia hansenii DSM 20583] Length = 378 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 136/369 (36%), Positives = 217/369 (58%), Gaps = 6/369 (1%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TPY+L+D+++LL+NL+ + + +G K+LLA K F+ + + + +Y+ GTT+S LYE Sbjct: 11 TPYFLVDEKRLLHNLEILKSVSEKSGCKILLAQKAFSMFYAYPLMREYLAGTTASGLYEA 70 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 LG E+FG ETH ++ AY++ E D +L D ++FN+ +Q KF KA+ K +GLRIN Sbjct: 71 KLGCEEFGKETHVFSPAYREKEFDEILKYADDVVFNSPTQFKKFAKKAKAAGKSVGLRIN 130 Query: 124 PSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 P S + DP FSRLG ++ E + ++GL FH CE LK + Sbjct: 131 PQCSTQEGHAIYDPCADFSRLGTTLENFEEELLSELDGLHFHTLCEQG-ADALEITLKAV 189 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 E++FG ++ Q++W++LGGG H T DY V + ++ E Y V++YLEPGEA+V + Sbjct: 190 EEKFGKYLYQMKWLNLGGGHHITKADYDVDALIRMVRHLKETYDVEVYLEPGEAVVLDAG 249 Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRSCL 298 L + VL++ N ++ I+D+S H+PD L + T + G +CL Sbjct: 250 FLVSQVLEVVHNGMDIAILDTSAACHMPDVLEMPYRPPVKDSGLAGEKACTVRLAGPTCL 309 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 AGD+ G++ F+ P+K GD + FED+A Y + + N FNG+ +P I ++ +G +K ++ F Sbjct: 310 AGDVMGDYSFDAPLKEGDLVVFEDMALYTMVKTNTFNGMPLPDIVWRDRNGEMKLVKSFG 369 Query: 359 YNDYYNNLS 367 Y D+ LS Sbjct: 370 YEDFKGRLS 378 >gi|332716887|ref|YP_004444353.1| carboxynorspermidine decarboxylase [Agrobacterium sp. H13-3] gi|325063572|gb|ADY67262.1| carboxynorspermidine decarboxylase [Agrobacterium sp. H13-3] Length = 365 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 219/367 (59%), Positives = 277/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M++TPYYLIDK KLL N++ Y+R+ +G K LLALKCFA W +FD ++QYMDGTTSSSL Sbjct: 1 MLQTPYYLIDKTKLLRNMEKIAYVREKSGAKALLALKCFATWSVFDFMSQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YEV LG EKF GETHAY+VAY D EID V+SN D IIFN++SQL +F +KA + GL Sbjct: 61 YEVRLGREKFSGETHAYSVAYADYEIDEVISNADKIIFNSISQLERFAEKASGIT--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K++ + ++G M HNNCEN F F ML Sbjct: 119 RLNPQVSSSSFDLADPARPFSRLGEWDVAKVDKVMDRISGFMIHNNCENGDFSLFDRMLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE++FG +++ EW+SLGGGIHFT +YP+ FC RL FSEKY VQ+YLEPGEA +T Sbjct: 179 QIEEKFGSLLSRAEWVSLGGGIHFTGDNYPLDQFCDRLAAFSEKYGVQVYLEPGEASITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL TVLD N KNL IVDSS+EAH+ D L+Y+E+A + PN G + MVCG+SCLAG Sbjct: 239 STTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYRETAKVLPNEGEHPYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG+F F+K +K+GDRISFED AGY + +KNWFNG+ MP IA+K +DG+++A+REF + Sbjct: 299 DIFGDFRFDKELKVGDRISFEDAAGYTMVKKNWFNGVKMPAIAIKELDGSVRAVREFDFA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEQSLS 365 >gi|323692273|ref|ZP_08106514.1| carboxynorspermidine decarboxylase [Clostridium symbiosum WAL-14673] gi|323503688|gb|EGB19509.1| carboxynorspermidine decarboxylase [Clostridium symbiosum WAL-14673] Length = 383 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 132/378 (34%), Positives = 222/378 (58%), Gaps = 12/378 (3%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++KTPYYL+D+ L NL+ + AG K+LLA K F+ + ++ L +Y+ G+ +S L Sbjct: 7 LLKTPYYLVDETLLKQNLEILREVSGRAGCKILLAQKAFSMFSVYPLLREYLAGSAASGL 66 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +E LGHE+FGGETH ++ AY++ E D +L D ++FN+ SQ+ K+ ++ + K GL Sbjct: 67 FEARLGHEEFGGETHVFSAAYREDEFDEILRYADHVVFNSPSQVKKYGERVKAAGKSAGL 126 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSFL 173 R+NP S + DP P SRLG ++ + + ++G FH CE S Sbjct: 127 RLNPECSTQEGHAIYDPCSPGSRLGTTKRNLESAGKFETELLPYLDGFHFHTLCEQNS-D 185 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 L +E++FG+++ +++W++LGGG H T +DY + + + + EKY ++IYLEP Sbjct: 186 ALETTLAALEEKFGNYLPRLKWLNLGGGHHITREDYDRERLIRLILKLREKYGLEIYLEP 245 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYT 289 GEA+V N L +TVL+ EN + ++D+S H+PD L + P P+T Sbjct: 246 GEAVVLNAGFLVSTVLETMENGIEIAVLDTSAACHMPDVLEMPYRPPVLGGGEPGEKPHT 305 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 + G +CLAGD+ G++ F+ P+ G ++ F D+A Y + + N FNG+ +P++ ++++ G Sbjct: 306 YRLGGPTCLAGDVIGDYSFDTPLTEGKKVIFSDMALYTMVKNNTFNGMPLPSLVLRDLQG 365 Query: 350 TIKAIREFSYNDYYNNLS 367 + ++EF Y D+ LS Sbjct: 366 RFRPVKEFGYEDFKGRLS 383 >gi|170721307|ref|YP_001748995.1| carboxynorspermidine decarboxylase [Pseudomonas putida W619] gi|169759310|gb|ACA72626.1| carboxynorspermidine decarboxylase [Pseudomonas putida W619] Length = 365 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 215/367 (58%), Positives = 281/367 (76%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDK KLL+N++ Y+R+++G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG +KF GETHAY+VA+ D E++ +L NCD IIFN++ QL +F +K++ GL Sbjct: 61 YELKLGRQKFAGETHAYSVAWADDEVEEMLENCDKIIFNSIGQLQRFAEKSEGKV--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE +KIE I ++G MFHNNCEN F F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPEKIEKVISQISGFMFHNNCENGDFGLFDKMLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE+ FGH + ++EW+SLGGGIHFT +DY V FC RLK FS+ Y VQ+YLEPGEA +TN Sbjct: 179 HIEERFGHLLHKVEWVSLGGGIHFTGEDYAVDAFCARLKAFSQTYGVQVYLEPGEAAITN 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N KNL +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKNLAVVDSSIEAHLLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+IAVK +DG+++ +REF + Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLKMPSIAVKQLDGSVEVVREFGFE 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYVSSLS 365 >gi|146306022|ref|YP_001186487.1| carboxynorspermidine decarboxylase [Pseudomonas mendocina ymp] gi|145574223|gb|ABP83755.1| carboxynorspermidine decarboxylase [Pseudomonas mendocina ymp] Length = 365 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 218/367 (59%), Positives = 280/367 (76%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDKQKLL NL+ Y+R+N+G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIQTPYYLIDKQKLLVNLEKIAYVRENSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG +KF GETHAY+VA+ D EI+ +++NCD IIFN++ QL +F ++ GL Sbjct: 61 YELKLGRQKFAGETHAYSVAWADDEIEEMVANCDKIIFNSIGQLERFAER--TEGTIRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE +KI + ++G MFHNNCEN SF F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPEKIAKVMGQISGFMFHNNCENGSFELFDKMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+ FGH I Q+EW+SLGGGIHFT + YP+ FC RLK FSEKY VQ+YLEPGEA +T Sbjct: 179 TIEERFGHLIAQVEWVSLGGGIHFTGEGYPIDAFCARLKAFSEKYGVQVYLEPGEAAITL 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N KNL +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKNLAVVDSSIEAHMLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F+KP+KIGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+I+ +R+F ++ Sbjct: 299 DIFGEYQFDKPLKIGDRLSFIDAAGYTMVKKNWFNGLKMPSIVVKQLDGSIEVVRQFEFD 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYLSSLS 365 >gi|313499053|gb|ADR60419.1| NspC [Pseudomonas putida BIRD-1] Length = 365 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 216/367 (58%), Positives = 280/367 (76%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDK KLL+N++ Y+R+++G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +E+ LG +KF GETHAY+VA+ D E++ +L NCD IIFN++ QL +F D Q K GL Sbjct: 61 FELKLGRQKFAGETHAYSVAWADDEVEEMLENCDKIIFNSIGQLQRFAD--QSEGKVRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE KIE I+ ++G MFHNNCEN F F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEQVIEQISGFMFHNNCENGDFGLFDKMLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE+ FGH + ++EW+SLGGGIHFT +DY V FC RLK FSEKY VQ+YLEPGEA +TN Sbjct: 179 HIEERFGHLLHKVEWVSLGGGIHFTGEDYAVDAFCARLKAFSEKYGVQVYLEPGEAAITN 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N K+L +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +REF + Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVREFGFE 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYVSSLS 365 >gi|26989648|ref|NP_745073.1| carboxynorspermidine decarboxylase [Pseudomonas putida KT2440] gi|148547977|ref|YP_001268079.1| carboxynorspermidine decarboxylase [Pseudomonas putida F1] gi|24984533|gb|AAN68537.1|AE016485_10 carboxynorspermidine decarboxylase [Pseudomonas putida KT2440] gi|148512035|gb|ABQ78895.1| carboxynorspermidine decarboxylase [Pseudomonas putida F1] Length = 365 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 215/367 (58%), Positives = 280/367 (76%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDK KLL+N++ Y+R+++G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +E+ LG +KF GETHAY+VA+ D E++ +L NCD IIFN++ QL +F + Q K GL Sbjct: 61 FELKLGRQKFAGETHAYSVAWADDEVEEMLENCDKIIFNSIGQLQRFAE--QSEGKVRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE KIE I+ ++G MFHNNCEN F F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEQVIEQISGFMFHNNCENGDFGLFDKMLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE+ FGH + ++EW+SLGGGIHFT +DY V FC RLK FSEKY VQ+YLEPGEA +TN Sbjct: 179 HIEERFGHLLHKVEWVSLGGGIHFTGEDYAVDAFCARLKAFSEKYGVQVYLEPGEAAITN 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N K+L +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +REF + Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVREFGFE 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYVSSLS 365 >gi|254713089|ref|ZP_05174900.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M644/93/1] gi|254716558|ref|ZP_05178369.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M13/05/1] gi|261218356|ref|ZP_05932637.1| carboxynorspermidine decarboxylase [Brucella ceti M13/05/1] gi|261320795|ref|ZP_05959992.1| carboxynorspermidine decarboxylase [Brucella ceti M644/93/1] gi|260923445|gb|EEX90013.1| carboxynorspermidine decarboxylase [Brucella ceti M13/05/1] gi|261293485|gb|EEX96981.1| carboxynorspermidine decarboxylase [Brucella ceti M644/93/1] Length = 365 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 224/367 (61%), Positives = 276/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL N++ Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 1 MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA + GL Sbjct: 61 NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E + + G M HNNCEN F F ML Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + ++EW+SLGGGIHFT +DYPV FC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F+K + IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y Sbjct: 299 DIFGEFTFDKSLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKFVREFDYA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEGSLS 365 >gi|301062805|ref|ZP_07203403.1| carboxynorspermidine decarboxylase [delta proteobacterium NaphS2] gi|300443067|gb|EFK07234.1| carboxynorspermidine decarboxylase [delta proteobacterium NaphS2] Length = 385 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 131/373 (35%), Positives = 214/373 (57%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP +++D+ +L NL +++ G ++LLALK FA + +F L + + G +SS + Sbjct: 14 VSTPCFVVDEGRLRQNLAVLKHVQDRTGCRILLALKAFAMFSVFPLLGKTLHGVCASSPH 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIG 119 E LG+E+F GE H + AY + ++ V+ + ++FN+ SQ ++F+ Q K + G Sbjct: 74 EARLGYEEFKGEVHTFAAAYSEAQMRKVMRYSNVVVFNSFSQWDRFRPFLQNASKDIRCG 133 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S K L DP SRLG + ++ ++GL FH CE+ L Sbjct: 134 IRVNPEHSEGKVPLYDPCASGSRLGVRRSRFEGEDLTGISGLHFHTLCEHN-VDALERTL 192 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + E++FG F+ + W++ GGG H T DY V+ C+ + +F +YS+Q+YLEPGEA+ Sbjct: 193 RVFEEKFGSFLKGMTWVNFGGGHHITRPDYDVEQLCRLILDFKRRYSLQVYLEPGEAVAL 252 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGR 295 N L TVLDI +N + ++D+SV H+PD L + YT + G+ Sbjct: 253 NAGILVATVLDIVQNDMPIAVLDTSVPCHMPDVLEMPYRPEVACTGLPQEKAYTYRLTGQ 312 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAI 354 SCLAGD+ GE+ F++P+ +G R++F D+A Y + + N FNG+ +P IA+ + + +++ I Sbjct: 313 SCLAGDVAGEYSFDRPLHLGQRLAFLDMAHYTMVKTNTFNGVALPDIALYDHRNDSVQVI 372 Query: 355 REFSYNDYYNNLS 367 R F Y DY LS Sbjct: 373 RTFGYEDYRMRLS 385 >gi|320529222|ref|ZP_08030314.1| carboxynorspermidine decarboxylase [Selenomonas artemidis F0399] gi|320138852|gb|EFW30742.1| carboxynorspermidine decarboxylase [Selenomonas artemidis F0399] Length = 380 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 122/369 (33%), Positives = 199/369 (53%), Gaps = 7/369 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP YL+ ++ L +NL+ I ++ G K+LLA KCF+ + + + +Y+ GTT+S +Y Sbjct: 15 VPTPSYLVYEELLTHNLEILKGIAEHTGAKVLLAQKCFSMYYYYPLIGRYLAGTTASGIY 74 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+ G E H + AY+ EI A+ + CD I+FN+ SQ +F A+ G+R Sbjct: 75 EARLSQEEMGKENHVFKPAYEAEEITALAAICDHIVFNSFSQWERFGAAARAQGASCGIR 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + + DP P SRLG K + E+ + ++GL FH CE + L Sbjct: 135 INPERSTQEHAIYDPCAPGSRLGVKIAEFPETLPEGIDGLHFHTLCEQG-ADALAVTLAA 193 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E++FG+++ ++W++ GGG H T DY + + ++ E Y V +YLEPGEA+ N Sbjct: 194 VEEKFGNYLHGLKWLNFGGGHHITRADYDIALLEELIRHVQETYDVAVYLEPGEAVALNA 253 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRSC 297 L +VLD+ + ++ ++ H+PD + + +T + G +C Sbjct: 254 GYLAASVLDVRADGNVILNTSAA--CHMPDVIEMPYRPPVVGAGEAGEKAHTYTLAGPTC 311 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 LAGD G + F+ P+ GDR+ F D+A Y + + N FNG+ +P I + G + +R F Sbjct: 312 LAGDTIGTYSFDAPLAPGDRVVFGDMAIYTMVKNNTFNGMPLPHIVAVDPSGAWEIVRSF 371 Query: 358 SYNDYYNNL 366 Y D+ L Sbjct: 372 GYEDFKMRL 380 >gi|319407852|emb|CBI81505.1| carboxynorspermidine decarboxylase [Bartonella sp. 1-1C] Length = 365 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 210/367 (57%), Positives = 271/367 (73%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI TPYYLIDK KL+ N+ T ++R +GVK+LLALKCFA W +FD ++QYMDGTTSSSL Sbjct: 1 MIGTPYYLIDKSKLIKNMKTIAHLRAISGVKVLLALKCFATWSLFDVMSQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID D IIFN++ QL +F + + GL Sbjct: 61 YELRLGKEKFGKETHAYSVAWADDEIDEACGYADKIIFNSIQQLKRFAN--TTKTIQRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LA+P+RPFSRLGE +D I+ + +NGLM HNNCEN F F+ ML Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQDAIKEVLPLINGLMIHNNCENSDFNLFNQMLN 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++F I+WISLGGGIHFT ++YP++D +RLK FS+ Y V ++LEPGEA +T Sbjct: 179 HIEEKFKELFVAIDWISLGGGIHFTAENYPLEDLAKRLKHFSQTYGVTVFLEPGEAAITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL +VLD N KNL IVDSS+EAH+ D L+Y+E+A + PN GPY MVCG+SCLAG Sbjct: 239 STTLEVSVLDTLYNKKNLAIVDSSIEAHMLDLLIYRENAKLEPNHGPYEIMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG F F +P+KIGD++SF+D AGY + +KNWFNG+ MP I +K +GT+ R+FSYN Sbjct: 299 DIFGTFQFPEPLKIGDKLSFQDAAGYTMVKKNWFNGVAMPAIVIKECNGTLTLQRQFSYN 358 Query: 361 DYYNNLS 367 DY N+LS Sbjct: 359 DYKNSLS 365 >gi|313896306|ref|ZP_07829859.1| carboxynorspermidine decarboxylase [Selenomonas sp. oral taxon 137 str. F0430] gi|312975105|gb|EFR40567.1| carboxynorspermidine decarboxylase [Selenomonas sp. oral taxon 137 str. F0430] Length = 380 Score = 273 bits (699), Expect = 3e-71, Method: Composition-based stats. Identities = 121/369 (32%), Positives = 196/369 (53%), Gaps = 7/369 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP YL+ ++ L +NL+ + + G K+LLA KCF+ + + + +Y+ GTT+S +Y Sbjct: 15 VPTPSYLVYEELLTHNLEILKGLAERTGAKVLLAQKCFSMYYYYPLIGRYLAGTTASGIY 74 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+ G E H + AY+ EI A+ + CD I+FN+ SQ +F A+ G+R Sbjct: 75 EARLSQEEMGKENHVFKPAYEAEEITALAAICDHIVFNSFSQWERFGAAARAQGGSCGIR 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + + DP P SRLG K + E+ + ++GL FH CE + L Sbjct: 135 INPERSTQEQAIYDPCAPGSRLGVKIAEFPETLPEGIDGLHFHTLCEQG-ADALAVTLAA 193 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E++FG ++ ++W++ GGG H T DY V + ++ E Y V +YLEPGEA+ N Sbjct: 194 VEEKFGKYLHGLKWLNFGGGHHITRADYDVALLEELIRHVQETYDVAVYLEPGEAVALNA 253 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSC 297 L +VLD+ + ++ ++ H+PD + + +T + G +C Sbjct: 254 GYLAASVLDVRADGNVILNTSAA--CHMPDVIEMPYRPPVVGAGEAREKAHTYTLAGPTC 311 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 LAGD G + F+ P+ GD + F D+A Y + + N FNG+ +P I + G + +R F Sbjct: 312 LAGDTIGTYSFDAPLAPGDLVVFGDMAIYTMVKNNTFNGMPLPHIVAVDPSGAWETVRSF 371 Query: 358 SYNDYYNNL 366 Y D+ L Sbjct: 372 GYEDFKMRL 380 >gi|114777232|ref|ZP_01452243.1| Carboxynorspermidine decarboxylase [Mariprofundus ferrooxydans PV-1] gi|114552377|gb|EAU54860.1| Carboxynorspermidine decarboxylase [Mariprofundus ferrooxydans PV-1] Length = 377 Score = 273 bits (699), Expect = 3e-71, Method: Composition-based stats. Identities = 127/371 (34%), Positives = 209/371 (56%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++++ KL+ NL +++ +G K++LALK ++ W FD + QY+ G T+SSLY Sbjct: 8 VPSPCYVLEEDKLVGNLKLLKRVQEQSGCKIILALKGYSMWSTFDLIKQYLPGCTASSLY 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+ L EKFGGE H Y+ A++D E D + S ++FN+V+Q +F KA G+R Sbjct: 68 ELKLSDEKFGGENHIYSAAFRDDEFDEICSMAGHLVFNSVNQWQRFGAKAVAAGVSCGIR 127 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP ++ + L +P SRLG + + +++ + G+ H CEN ++ Sbjct: 128 VNPGIAEVETDLYNPCFSGSRLGVRPEHLHGADLAGIEGMHAHALCENL-ADSSVTLIDA 186 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E F +I ++W++ GGG T KDY +R++EF K+ V++YLEPG AI T Sbjct: 187 FEARFADYIPALKWVNFGGGHLITHKDYDADKLIRRIREFKAKWDVEVYLEPGGAIGWRT 246 Query: 242 TTLNTTVLDISENIK-NLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 L +VLDI + I+D S AH+PD L + N P+T + G S Sbjct: 247 GPLIASVLDIVPTDGLPVAILDISATAHMPDVLEMPYRPAVTGSGGANEKPHTYRLGGTS 306 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ G++ F++P++ G R+ FED+ Y + + FNG+ P I + + + + + +R Sbjct: 307 CLAGDVIGDYSFDEPLQAGTRLVFEDMIHYTMVKTTMFNGVRHPDIGIWHSNDSFELVRR 366 Query: 357 FSYNDYYNNLS 367 F+Y D+ + LS Sbjct: 367 FTYEDFRDRLS 377 >gi|189424736|ref|YP_001951913.1| carboxynorspermidine decarboxylase [Geobacter lovleyi SZ] gi|189420995|gb|ACD95393.1| carboxynorspermidine decarboxylase [Geobacter lovleyi SZ] Length = 384 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 129/372 (34%), Positives = 208/372 (55%), Gaps = 8/372 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D +L +NL +++ +G ++L+ALK F+ W F +++ + G +SS +E Sbjct: 14 PSPAYVVDLGRLRHNLAILDQVQQRSGARILMALKAFSMWSTFPLISKTLHGVCASSPWE 73 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120 LG E+FG E H++ A+K+ ++ +LS + ++FN+ +QL +F+ +K + IGL Sbjct: 74 ARLGREEFGREVHSFAAAFKESDVVELLSISNHLVFNSFNQLERFRPLWEKEQGRVSIGL 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + DP P SRLG + + V GL FH CE F + Sbjct: 134 RVNPEHSEGHTAIYDPCAPTSRLGIPVAEFEGRSLAGVEGLHFHTLCEQL-FEPLERTAR 192 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 E++FG ++ ++W++LGGG H T + Y + + + F KY V++YLEPGEAI Sbjct: 193 AFEEKFGRYLQGMKWLNLGGGHHITREGYDIDGLVELVTYFKNKYGVEVYLEPGEAIAIG 252 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L + VLD+ N ++ I+D S H+PD L I PYT + G S Sbjct: 253 TGLLVSEVLDVVHNQMDIAILDVSATCHMPDILEMPYRPDITGGFKAGEKPYTYRLGGPS 312 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIR 355 CLAGD+ G++ F++P+K GDR+ FED+A Y + + FNGI+ P + D G ++ +R Sbjct: 313 CLAGDVIGDWSFDQPLKAGDRLVFEDMAHYTMVKTTTFNGIHHPHLCTFEPDTGQLQVVR 372 Query: 356 EFSYNDYYNNLS 367 F Y D+ + LS Sbjct: 373 SFGYPDFKSKLS 384 >gi|254469619|ref|ZP_05083024.1| carboxynorspermidine decarboxylase [Pseudovibrio sp. JE062] gi|211961454|gb|EEA96649.1| carboxynorspermidine decarboxylase [Pseudovibrio sp. JE062] Length = 391 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 126/370 (34%), Positives = 203/370 (54%), Gaps = 5/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ + NL + +G +L ALK F+ + + + +Y++GT +S LY Sbjct: 23 VPSPCFVVDEVAVRRNLSMLKDVADRSGAHVLAALKAFSMFALAPVVREYLEGTCASGLY 82 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIG 119 E LG EK+GGE + YK EID ++ D +IFN+ +Q ++F +A K + +G Sbjct: 83 EARLGREKYGGEVATFCAGYKASEIDEIIGYTDHMIFNSPAQKDRFLPNVRAAKHNVDVG 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LR+NP S + DP P SRLG + V+G+ H CE + F Sbjct: 143 LRVNPEHSEGEVEKYDPCAPCSRLGFPVSQLSAEVLTGVDGIHMHTLCEQE-FEPLQRTW 201 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 ++ + + Q++WI+ GGG H T +DY + +K+ + +++YLEPGEA+ Sbjct: 202 NAVKDKLAPYFGQLKWINFGGGHHITREDYDREALIAFIKDVRAETGLEVYLEPGEAVAL 261 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMVCGRSCL 298 + L VLD+ +N +L IVD S H+PD + + + +T + G SCL Sbjct: 262 DAGILIGEVLDLPKNGMDLAIVDISATCHMPDVIEAPYRPAMLDESEEGHTYRLGGPSCL 321 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIREF 357 AGD+ G++ +P++IGDR +F D A Y++ + N FNG+ +PTIA+ N +K IREF Sbjct: 322 AGDVIGDYTRAEPLQIGDRFAFLDQAHYSMVKTNTFNGVPLPTIALWNSESDELKIIREF 381 Query: 358 SYNDYYNNLS 367 SYND+ N LS Sbjct: 382 SYNDFLNRLS 391 >gi|116749354|ref|YP_846041.1| carboxynorspermidine decarboxylase [Syntrophobacter fumaroxidans MPOB] gi|116698418|gb|ABK17606.1| carboxynorspermidine decarboxylase [Syntrophobacter fumaroxidans MPOB] Length = 378 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 137/372 (36%), Positives = 215/372 (57%), Gaps = 7/372 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++D+ L NL +R+ G ++L+ALK FA + +F + + + G +SS Sbjct: 8 IETPCYVVDEAALDRNLAVLDTVRQRTGCRILMALKGFAMFSLFPQIREVLAGVAASSPD 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIG 119 E LG E+F GE HAY AY++ E+ +L CD ++FN+ SQ N+FK + + G Sbjct: 68 EARLGFEEFRGEVHAYAPAYRESELTELLEYCDHLVFNSFSQWNRFKSRVFDHPAPVRCG 127 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S + DP FSRLG E ++ ++GL FH CE L Sbjct: 128 IRVNPEHSEVSVPIYDPCARFSRLGVPRSAFREEDLDGISGLHFHTLCE-LDADSLERTL 186 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 E FG F+ ++EW++ GGG H T DY V C+ + +F ++ ++IYLEPGEA+ Sbjct: 187 AAFETRFGAFLERMEWVNFGGGHHITRPDYDVDLLCRLIDDFRSRHPLEIYLEPGEAVAL 246 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295 NT L +VLD+ N ++ I+D+S AH+PD L I P P+T + G Sbjct: 247 NTGILGASVLDLIHNEMDIAILDTSAAAHMPDVLEMPYRPEIDGAGMPGEYPHTYRLGGL 306 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGD+ G++ F +P++IG +++F D+A Y + + N FNG+ +P+IA+++ G ++ +R Sbjct: 307 TCLAGDVIGDYSFPEPLRIGSKLAFLDMAHYTMVKNNTFNGVRLPSIAIRDRRGNVRVVR 366 Query: 356 EFSYNDYYNNLS 367 +F Y DY N LS Sbjct: 367 KFGYEDYRNRLS 378 >gi|94265115|ref|ZP_01288880.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1] gi|93454402|gb|EAT04700.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1] Length = 380 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 134/373 (35%), Positives = 203/373 (54%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ D +L NL+ +++ G +++LA K FA W +F +++ + G ++SSL Sbjct: 9 VPSPCYVCDSGRLAANLEKLDLVQRRTGARIILAFKGFAMWRLFPQISRVLPGASASSLD 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E L E+FGGE H Y AY+D E +L D ++FN+ +Q +FK A G Sbjct: 69 EARLAREEFGGEVHVYCPAYRDDEFAEMLGYADHLVFNSFNQWQRFKPLVAADSRPHSCG 128 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S L +P P SRLG + ++GL FH CE + L Sbjct: 129 IRVNPQYSEVAVDLYNPCGPHSRLGVTRAQFRPELLAGLDGLHFHALCEQN-ADALAGTL 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 ++FG F+ ++W+++GGG H T DY + C+ + E +Y V++YLEPGEAI Sbjct: 188 AAFHEKFGEFMDGMKWLNMGGGHHITRPDYDIDQLCRLIDEVRTRYHVRVYLEPGEAIAL 247 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295 + L TVLDI +N I+D+S AH+PD L I P PYT + G Sbjct: 248 DIGVLVATVLDIVDNEGRSAILDTSAAAHMPDVLEMPYRPEIFGAGEPGQYPYTYRLGGL 307 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAI 354 SCLAGD+ GE+ F +P++IG R+ F D+A Y + + N FNG+ +P+IA+ ++ + Sbjct: 308 SCLAGDVIGEYSFPEPLQIGQRLVFGDMAHYTMVKNNTFNGVRLPSIAIYEPATDHLEVV 367 Query: 355 REFSYNDYYNNLS 367 R F Y DY N LS Sbjct: 368 RRFGYEDYRNRLS 380 >gi|154506605|ref|ZP_02043062.1| hypothetical protein RUMGNA_03872 [Ruminococcus gnavus ATCC 29149] gi|153793358|gb|EDN75780.1| hypothetical protein RUMGNA_03872 [Ruminococcus gnavus ATCC 29149] Length = 372 Score = 273 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 132/370 (35%), Positives = 208/370 (56%), Gaps = 8/370 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP Y+I + ++ NL IR+ +G K+LLA K F+ + + + +Y+DGTT+S LY Sbjct: 6 LRTPCYVIMESEMKKNLQILQEIRQQSGCKILLAQKAFSMYSCYPLIGEYLDGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E G E H ++ AY++ E + VL +C+ ++FN+ SQL F ++A K K +G+R Sbjct: 66 EAKLGKECMGKENHIFSPAYREDEFEEVLESCEHLVFNSFSQLECFGERAAKAGKSVGIR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S + DP P SRLG + E+ V GL FH CE LK Sbjct: 126 VNPECSTQGEHAIYDPCAPGSRLGILVSEFPETLPSYVEGLHFHTLCEQN-ADALEITLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++FG ++ Q++W++ GGG H T DY + ++ + Y+VQ+YLEPGEA+ N Sbjct: 185 AVEEKFGKWMKQLKWVNFGGGHHITRADYDRELLISCVRRIQDTYNVQVYLEPGEAVALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L TTV DI N ++ D S H+PD + ++ YT ++ G + Sbjct: 245 AGHLITTVEDIVHNDIAVL--DVSAACHMPDVIEMPYRPPLFDSGEAKEKEYTYLLGGPT 302 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ G + F++P+K+GDR++F D+A Y + N FNG+ +P I + G + ++ Sbjct: 303 CLAGDVIGSYSFDQPLKVGDRLTFGDMAIYTTVKNNTFNGMRLPDIVWERESGECEIVKS 362 Query: 357 FSYNDYYNNL 366 F Y D+ L Sbjct: 363 FGYEDFKCRL 372 >gi|15890809|ref|NP_356481.1| carboxynorspermidine decarboxylase [Agrobacterium tumefaciens str. C58] gi|15159095|gb|AAK89266.1| carboxynorspermidine decarboxylase [Agrobacterium tumefaciens str. C58] Length = 365 Score = 273 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 220/367 (59%), Positives = 278/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M++TPYYLIDK KLL N++ Y+R+ +G K LLALKCFA W +FD ++QYMDGTTSSSL Sbjct: 1 MLQTPYYLIDKTKLLRNMEKIAYVREKSGAKALLALKCFATWSVFDFMSQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YEV LG EKFGGETHAY+VAY D EID V++N D IIFN++ QL +F DKA + GL Sbjct: 61 YEVRLGREKFGGETHAYSVAYADYEIDDVIANADKIIFNSIGQLERFADKASGIT--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K++ + ++G M HNNCEN F F ML Sbjct: 119 RLNPQVSSSSFDLADPARPFSRLGEWDVAKVDKIMDRISGFMIHNNCENGDFSLFDRMLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE++FG +++ EW+SLGGGIHFT DYP+ FC RL+ FSEKY VQ+YLEPGEA +T Sbjct: 179 QIEEKFGSLLSRAEWVSLGGGIHFTGDDYPLDQFCDRLRAFSEKYGVQVYLEPGEASITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL TVLD N KNL IVDSS+EAH+ D L+Y+E+A + PN G + MVCG+SCLAG Sbjct: 239 STTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYRETAKVSPNEGEHPYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG+F F+K +K+GDRISF+D AGY + +KNWFNG+ MP IA+K +DGT++A+REF + Sbjct: 299 DIFGDFRFDKELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIKELDGTVRAVREFDFA 358 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 359 DFEQSLS 365 >gi|256830088|ref|YP_003158816.1| carboxynorspermidine decarboxylase [Desulfomicrobium baculatum DSM 4028] gi|256579264|gb|ACU90400.1| carboxynorspermidine decarboxylase [Desulfomicrobium baculatum DSM 4028] Length = 389 Score = 273 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 147/377 (38%), Positives = 217/377 (57%), Gaps = 12/377 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ID L NLD +++ G K+LLALK FA W +F L Q +DG +SS + Sbjct: 14 VATPSFVIDLGLLRRNLDVLAEVKERTGCKILLALKGFAMWSLFPVLRQVLDGVCASSPH 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK------LH 115 E LG E+F E HA+ Y +I + + D I+FN+ QL KF+ Sbjct: 74 EARLGREEFKREVHAFAAGYSQADIFDLCTTADHIVFNSFGQLEKFRGLIATEAGRLGRE 133 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 ++G+RINP S + DP P SRLG + KD ++ V GL +HN CE S C Sbjct: 134 IELGVRINPEHSEGAVPIYDPCSPGSRLGIRRKDFRPDLLEGVTGLHWHNLCEQNS-DCL 192 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + EK FG F +++++++ GGG H T DY V C+ + EF ++ VQ+YLEPGE Sbjct: 193 ERTIAAAEKGFGEFFSRMQYVNFGGGHHITRPDYDVDLLCRLISEFKARHGVQVYLEPGE 252 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAM 291 A+ NT L +TVLD+++ +VI+D+SV AH+PD L I P +T Sbjct: 253 AVALNTGYLVSTVLDVTQADMPIVILDTSVPAHMPDVLEMPYRPHIVDSGLPGEKSWTCR 312 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGT 350 + G+SCLAGD+ GE+ F+KP+ GDR+ F D+A Y++ + N FNGI +P+IA+ D + Sbjct: 313 LGGQSCLAGDVAGEYSFDKPLVPGDRLVFTDMAHYSMVKTNTFNGIQLPSIAIFEPEDDS 372 Query: 351 IKAIREFSYNDYYNNLS 367 ++ +R+F Y D+ N LS Sbjct: 373 MRVVRKFGYEDFKNRLS 389 >gi|229591022|ref|YP_002873141.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens SBW25] gi|229362888|emb|CAY49798.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens SBW25] Length = 365 Score = 273 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 217/367 (59%), Positives = 278/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDKQKLL N+ Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKQKLLVNMQKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG +KF GE HAY+VA+ D EI+ +L NCD IIFN++SQL +F ++++ GL Sbjct: 61 YELKLGRQKFEGEAHAYSVAWADDEIEEMLDNCDKIIFNSISQLQRFAERSEGKT--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE KIE I+ ++G MFHNNCEN F F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPVKIEGVIEQISGFMFHNNCENGDFSLFDNMLG 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+ FG + ++EW+SLGGGIHFT +DY V FC RLK FSEKY VQ+YLEPGEA +TN Sbjct: 179 TIEERFGALLHKVEWVSLGGGIHFTGEDYAVDAFCARLKAFSEKYGVQVYLEPGEAAITN 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N KNL +VDSS+EAH+ D L+Y+ +A + P+ G +T MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKNLAVVDSSIEAHLLDLLIYRLNAKLAPSDGEHTVMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DGT++ +REF Y+ Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLKMPSIVVKQLDGTVEVVREFGYD 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYLSSLS 365 >gi|94265973|ref|ZP_01289697.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1] gi|93453476|gb|EAT03889.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1] Length = 380 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 135/373 (36%), Positives = 202/373 (54%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ D +L NL+ +++ G +++LA K FA W +F +++ + G ++SSL Sbjct: 9 VPSPCYVCDSGRLAANLEKLDLVQRRTGARIILAFKGFAMWRLFPQISRVLPGASASSLD 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E L E+FGGE H Y AY+D E +L D ++FN+ Q +FK A G Sbjct: 69 EARLAREEFGGEVHVYCPAYRDDEFAEMLGYADHLVFNSCHQWQRFKPLVAADSRPHSCG 128 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S L +P P SRLG + ++GL FH CE + L Sbjct: 129 IRVNPQYSEVAVDLYNPCGPHSRLGVTRAQFRPELLAGLDGLHFHALCEQN-ADALAGTL 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 ++FG F+ ++W+++GGG H T DY + C+ + E +Y VQ+YLEPGEAI Sbjct: 188 AAFHEKFGEFMDGMKWLNMGGGHHITRPDYDIDQLCRLIDEVRTRYHVQVYLEPGEAIAL 247 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295 + L TVLDI +N I+D+S AH+PD L I P PYT + G Sbjct: 248 DIGVLVATVLDIVDNEGRSAILDTSAAAHMPDVLEMPYRPEIFGAGEPGQYPYTYRLGGL 307 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAI 354 SCLAGD+ GE+ F +P++IG R+ F D+A Y + + N FNG+ +P+IA+ ++ + Sbjct: 308 SCLAGDVIGEYSFPEPLQIGQRLVFGDMAHYTMVKNNTFNGVRLPSIAIYEPATDHLEVV 367 Query: 355 REFSYNDYYNNLS 367 R F Y DY N LS Sbjct: 368 RRFGYEDYRNRLS 380 >gi|152991040|ref|YP_001356762.1| carboxynorspermidine decarboxylase [Nitratiruptor sp. SB155-2] gi|151422901|dbj|BAF70405.1| carboxynorspermidine decarboxylase [Nitratiruptor sp. SB155-2] Length = 382 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 139/372 (37%), Positives = 213/372 (57%), Gaps = 9/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+ ++ L NL+ +++ +G K++LALK FA W FD L QY+ G T+S L+ Sbjct: 14 IPTPCYVCEEGLLRRNLEILDEVQQKSGAKIILALKGFAMWSTFDILKQYLHGATASGLW 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIG 119 E L E+ G E H Y+ A+K+ EI+ + D I+FN++ Q N FKD + IG Sbjct: 74 EAKLAFEELGKEVHTYSPAFKEDEIELIAKMSDHIVFNSMHQFNAFKDIVKKTDPDISIG 133 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S + L +P FSRLG + S + GL FH CE +S +L Sbjct: 134 VRVNPEYSAAPVDLYNPCGAFSRLGVVRSEF--SWDDAIKGLHFHALCE-ESAESLEGVL 190 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 K E+ FG F+ + +WI+ GGG H T + Y + + +++F ++Y V++YLEPGEA+ Sbjct: 191 KAFEERFGEFVPKCKWINFGGGHHITKEGYNRELLIKLIRDFKKRYDVEVYLEPGEAVGW 250 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 T L TV+DI N ++ I+D+S E H+PD L + P PYT + G Sbjct: 251 QTGVLVATVVDIVHNGMDIAILDTSAETHMPDVLAMPYRPDVRGAAKPGEKPYTYRLGGN 310 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 SCLAGDI G++ F++P++ G ++ FED+ Y + FNGI +P++A+ DG + ++ Sbjct: 311 SCLAGDIIGDYSFDEPLQRGQKLVFEDMIHYTFVKNTTFNGIRLPSLALLKEDGKFEIVK 370 Query: 356 EFSYNDYYNNLS 367 +F Y DY + LS Sbjct: 371 KFDYCDYKHRLS 382 >gi|167033842|ref|YP_001669073.1| carboxynorspermidine decarboxylase [Pseudomonas putida GB-1] gi|166860330|gb|ABY98737.1| carboxynorspermidine decarboxylase [Pseudomonas putida GB-1] Length = 365 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 213/367 (58%), Positives = 279/367 (76%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDK KLL+N++ Y+R+++G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +E+ LG +KF GETHAY+VA+ D E++ +L NCD IIFN++ QL +F + Q K GL Sbjct: 61 FELKLGRQKFAGETHAYSVAWADDEVEEMLENCDKIIFNSIGQLQRFAE--QSEGKVRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE KIE I+ ++G MFHNNCEN F F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEQVIEQISGFMFHNNCENGDFGLFDKMLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE+ FGH + ++EW+SLGGGIHFT +DY V FC RLK FS+ Y VQ+YLEPGEA +TN Sbjct: 179 HIEERFGHLLHKVEWVSLGGGIHFTGEDYAVDAFCARLKAFSQTYGVQVYLEPGEAAITN 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N K+L +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +REF + Sbjct: 299 DIFGEYQFDRPLTIGDRLSFIDTAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVREFGFE 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYVSSLS 365 >gi|304436965|ref|ZP_07396928.1| carboxynorspermidine decarboxylase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369916|gb|EFM23578.1| carboxynorspermidine decarboxylase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 378 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 124/369 (33%), Positives = 194/369 (52%), Gaps = 7/369 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP YL+ ++ L NL + ++ G +LLA KCF+ + + + +Y+ GTT+S +Y Sbjct: 13 VPTPSYLVYEELLEKNLKVLAEVAEDTGATILLAQKCFSMYHYYPLIGRYLAGTTASGIY 72 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+ G E H + AY+D EI+ + S CD IIFN+ SQ +F A+ G+R Sbjct: 73 EARLSQEEMGKENHVFKPAYEDEEIEQLASICDHIIFNSFSQWERFGTVARLHGASCGMR 132 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + DP P SRLG K D E + ++GL FH CE L Sbjct: 133 INPECSTQDHAIYDPCAPGSRLGVKTADFREEILAGLDGLHFHTLCEQG-ADALEETLDA 191 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E++FG ++ ++W++ GGG H T Y + + ++ EKY V +YLEPGEA+ N Sbjct: 192 VEEKFGKYLHGMKWLNFGGGHHITRVGYDISLLKKLIRRVQEKYHVAVYLEPGEAVALNA 251 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSC 297 L + VLD+ ++ ++ H+PD + + +T + G +C Sbjct: 252 GFLVSEVLDVQAGGNVILNTSAA--CHMPDVIEMPYRPPVVGAGEAGEKAHTYTLAGPTC 309 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 LAGD G + F+ P+ IGDR+ F D+A Y + + N FNG+ +P I + G + +R F Sbjct: 310 LAGDTIGTYSFDTPLCIGDRVVFGDMAIYTMVKNNTFNGMPLPYIIAVSPQGEWETVRTF 369 Query: 358 SYNDYYNNL 366 Y+D+ L Sbjct: 370 GYDDFKMRL 378 >gi|254492579|ref|ZP_05105751.1| carboxynorspermidine decarboxylase [Methylophaga thiooxidans DMS010] gi|224462471|gb|EEF78748.1| carboxynorspermidine decarboxylase [Methylophaga thiooxydans DMS010] Length = 388 Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats. Identities = 129/376 (34%), Positives = 209/376 (55%), Gaps = 11/376 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ + NL + + +G K+L ALK F+ W + +QY+ GT +S L+ Sbjct: 14 LPSPCFVVDEVAVERNLRILSDVAEASGAKILGALKAFSMWSFGNMTHQYLSGTCASGLH 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QKLHK 116 E LGHE++GGE H + A+ +ID +L+ I+FN+ Q +F+++ Q+ Sbjct: 74 EAKLGHEEYGGEVHVFAAAFSQADIDELLTFAHHIVFNSCGQWLRFREQCLAAKKQRPEL 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + GLRINP S + DP P SRLG ES + + GL FH CE F S Sbjct: 134 QFGLRINPEHSEGTVPIYDPCAPGSRLGITLSQLDESVLDGITGLHFHTLCEQG-FEPLS 192 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + +EK FGH ++Q++W++ GGG H T Y + + ++ F ++++V++Y+EPGEA Sbjct: 193 RTVAAVEKNFGHLLSQMDWVNFGGGHHITADGYNINGLVEMVQVFRQRHNVEVYMEPGEA 252 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMV 292 + T L+ VLDI+ N N I+D+S H+PD L I +T + Sbjct: 253 MAIGTGVLSCEVLDITWNQINQAILDTSATCHMPDTLEMPYRPDITGAAEAEKLSHTYRL 312 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTI 351 G +CLAGD+ G++ F KP++IG R+ FED+ Y + + FNG +P IA+ N + + Sbjct: 313 GGLTCLAGDVIGDYSFAKPLEIGQRLVFEDMGHYTMVKTTTFNGTKLPAIAIWNSETDAL 372 Query: 352 KAIREFSYNDYYNNLS 367 ++EF Y D+ + LS Sbjct: 373 CVVKEFGYADFKHRLS 388 >gi|319943411|ref|ZP_08017693.1| carboxynorspermidine decarboxylase [Lautropia mirabilis ATCC 51599] gi|319743226|gb|EFV95631.1| carboxynorspermidine decarboxylase [Lautropia mirabilis ATCC 51599] Length = 366 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 183/366 (50%), Positives = 247/366 (67%), Gaps = 2/366 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP YLID+ +L NL+T +R+ +G K LLALKCFA W +F + +Y+DGTTSSSL Sbjct: 3 LPTPCYLIDETRLRTNLETIARLRERSGAKALLALKCFAGWSVFPLMREYLDGTTSSSLN 62 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LGHEKFGGETH Y+VA+ E+ D +IFN++SQL + + +GLR Sbjct: 63 EVRLGHEKFGGETHGYSVAWAPGEVTEAARLADKLIFNSISQLKRLSNLCG--KTPLGLR 120 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS S ++LADP RP SRLGE +IE ++G+M HNNCEN+S FS ML Sbjct: 121 LNPGVSNSPYLLADPARPNSRLGESDPARIEQVADLISGVMIHNNCENRSLEQFSGMLDR 180 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE+ FG + ++ W+SLGGGIH+T YP++ RL+ F+++ VQ+YLEPGEA VT Sbjct: 181 IERTFGPLLKRLSWVSLGGGIHYTAPGYPLEALADRLRAFADRMQVQVYLEPGEAAVTGA 240 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 TL TVLD+ E K + I+D+S+EAH+ D L Y+ A + P+ GP+ + G +CLAGD Sbjct: 241 ATLEVTVLDVLERAKPIAIIDASIEAHMLDLLTYELPARVLPDEGPWRCQLAGNTCLAGD 300 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 IFGEF F P++ GDRIS +D AGY + +KNWFNG+ MP IAV+ +DG I+ R F Y D Sbjct: 301 IFGEFSFPHPLRPGDRISLQDAAGYTMVKKNWFNGVPMPAIAVRRLDGRIEMQRRFGYED 360 Query: 362 YYNNLS 367 Y ++LS Sbjct: 361 YRDSLS 366 >gi|308068410|ref|YP_003870015.1| carboxynorspermidine decarboxylase [Paenibacillus polymyxa E681] gi|305857689|gb|ADM69477.1| carboxynorspermidine decarboxylase [Paenibacillus polymyxa E681] Length = 379 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 142/373 (38%), Positives = 217/373 (58%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P YL+D++ L+ NL+ +++ G +LLALK F+ + F + +Y+ G TSSSL+ Sbjct: 8 LPSPCYLVDERLLVKNLEVLNSVQERTGCSILLALKGFSMFSTFPLVGKYLKGVTSSSLF 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ---KLHKKI 118 E LG EK E H Y AY D E D +L D I+FN+ QL ++K + Q I Sbjct: 68 EARLGREKMDKEVHVYAPAYVDSEFDELLEYVDHIVFNSFDQLKRYKSRVQGVTSKKIDI 127 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 G+R+NP S + L DP SR+G + ++ V+G+ FH CE S Sbjct: 128 GIRVNPEYSEIETPLYDPCYNNSRMGVTLANFRPEDLDGVDGIHFHTMCEQNS-DTLERT 186 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +K ++++FG +I ++W++ GGG H T +DY + + ++ F +KY VQ+YLEPGEAI Sbjct: 187 IKVVDEKFGPYIKNMKWLNFGGGHHITREDYDLDTLVRCIQYFQDKYGVQVYLEPGEAIA 246 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCG 294 NT L TVLD +N ++ I+D+S E H+PD L I P YT + G Sbjct: 247 LNTGYLVATVLDTMKNGMDIAILDTSAECHMPDVLAMPYRPNIIDAGKPGEYAYTYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +CLAGD+ G++ F++P+K GD++ F D+A Y + + + FNG+N+P IA N + IK I Sbjct: 307 LTCLAGDVIGDYSFKEPLKPGDKLVFCDMAHYTMVKNHMFNGVNLPAIASYNDEEGIKVI 366 Query: 355 REFSYNDYYNNLS 367 R+FSY D+ + LS Sbjct: 367 RQFSYEDFSSRLS 379 >gi|94271917|ref|ZP_01292037.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1] gi|93450300|gb|EAT01549.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1] Length = 380 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 135/373 (36%), Positives = 202/373 (54%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ D +L NL+ +++ G +++LA K FA W +F +++ + G ++SSL Sbjct: 9 VPSPCYVCDSGRLAANLEKLDLVQRRTGARIILAFKGFAMWRLFPQISRVLPGASASSLD 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E L E+FGGE H Y AY+D E +L D ++FN+ Q +FK A G Sbjct: 69 EARLAREEFGGEVHVYCPAYRDDEFAEMLGYADHLVFNSCHQWQRFKPLVAADSRPHSCG 128 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S L +P P SRLG + ++GL FH CE + L Sbjct: 129 IRVNPQYSEVAVDLYNPCGPHSRLGVTRAQFRPELLAGLDGLHFHALCEQN-ADALAGTL 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 ++FG F+ ++W+++GGG H T DY + C+ + E +Y VQ+YLEPGEAI Sbjct: 188 AAFHEKFGEFMDGMKWLNMGGGHHITRPDYDIDQLCRLIDEVRTRYHVQVYLEPGEAIAL 247 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295 + L TVLDI +N I+D+S AH+PD L I P PYT + G Sbjct: 248 DIGVLVATVLDIVDNEGRSAILDTSAAAHMPDVLEMPYRPEIFGAGEPGQYPYTYRLGGL 307 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAI 354 SCLAGD+ GE+ F +P++IG R+ F D+A Y + + N FNG+ +P+IA+ ++ + Sbjct: 308 SCLAGDVIGEYSFPEPLQIGQRLLFGDMAHYTMVKNNTFNGVRLPSIAIYEPATDHLEVV 367 Query: 355 REFSYNDYYNNLS 367 R F Y DY N LS Sbjct: 368 RRFGYEDYRNRLS 380 >gi|89067260|ref|ZP_01154773.1| hypothetical protein OG2516_10486 [Oceanicola granulosus HTCC2516] gi|89046829|gb|EAR52883.1| hypothetical protein OG2516_10486 [Oceanicola granulosus HTCC2516] Length = 365 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 207/367 (56%), Positives = 271/367 (73%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M++TPYYLIDKQ LL NL+ +R+ +G K LLALKCFAAW +FD +++YMDGTTSSS Sbjct: 1 MLRTPYYLIDKQALLPNLEKIARLRELSGCKCLLALKCFAAWSVFDLMSEYMDGTTSSSP 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +EV LG + F GETHAY+VA+ + ++ VL+N D IIFNT+ QL +F + A GL Sbjct: 61 FEVKLGRKHFPGETHAYSVAWDEADLLEVLANSDKIIFNTIGQLERFGEAA--SDHVRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F +ADP RPFSRLGE ++I + V+G MFHNNCEN F F AML Sbjct: 119 RVNPGISSSSFDIADPARPFSRLGEHDPERIGAVCDRVSGFMFHNNCENDDFDRFDAMLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+ FGH I+++EW+SLGGGIHFT + YP++ +RL+ FSE Y VQ+YLEPGEA +T+ Sbjct: 179 QIEERFGHLISRMEWVSLGGGIHFTGEGYPLEKLAERLRRFSETYGVQVYLEPGEAAITD 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL TVLD +N K L +VDSS+EAH+ D L+Y+E A + P+TG + MVCG SCLAG Sbjct: 239 STTLELTVLDTLDNGKKLAVVDSSIEAHMLDLLIYREQAKVAPDTGDHEWMVCGNSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF FE+P+K GDR+S D GY + +KNWFNG+ MP IAV+ +DGT++ +REFSY+ Sbjct: 299 DIFGEFRFERPLKPGDRVSIRDAGGYTMVKKNWFNGVRMPAIAVRELDGTVRTVREFSYS 358 Query: 361 DYYNNLS 367 D+ LS Sbjct: 359 DFEAALS 365 >gi|240851382|ref|YP_002972785.1| carboxynorspermidine decarboxylase [Bartonella grahamii as4aup] gi|240268505|gb|ACS52093.1| carboxynorspermidine decarboxylase [Bartonella grahamii as4aup] Length = 365 Score = 272 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 206/367 (56%), Positives = 273/367 (74%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDK KL+ N+ T +R+ +G K+LLALKCFA W +FD ++++MDGTTSSSL Sbjct: 1 MIKTPYYLIDKSKLIKNMQTISRLREMSGAKILLALKCFATWSVFDLMSEFMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID S D IIFN++ QL +F + + + GL Sbjct: 61 YELRLGREKFGKETHAYSVAWADHEIDEACSYADKIIFNSIQQLQRFSNAS--KTIQRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LA+P+RPFSRLGE + I+ + +NGLM HNNCEN F F+ ML Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQSAIKEVLPLINGLMIHNNCENADFNLFNQMLN 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 ++E++F ++WISLGGGIHFT ++YP++ F +RLK+FS+ + V ++LEPGEA +T Sbjct: 179 HMEEKFAELFAAVDWISLGGGIHFTAENYPLESFAKRLKQFSKTHGVTLFLEPGEAAITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL +VLD N KNL IVDSS+EAH+ D L+Y+E+A + PN GPY M+CG+SCLAG Sbjct: 239 STTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIYRENAKLEPNQGPYEIMICGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG F F+KP+KIGDR+SF+D AGY + +KNWFNG+ MP I +K DGT+ R+FSYN Sbjct: 299 DIFGTFQFQKPLKIGDRLSFQDAAGYTMVKKNWFNGVTMPAIVLKECDGTLTLQRQFSYN 358 Query: 361 DYYNNLS 367 DY +LS Sbjct: 359 DYQESLS 365 >gi|327481962|gb|AEA85272.1| carboxynorspermidine decarboxylase [Pseudomonas stutzeri DSM 4166] Length = 365 Score = 272 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 214/367 (58%), Positives = 277/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDKQKLL NL+ Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKQKLLGNLEKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG +KF GETHAY+VA+ D EI+ +++NCD IIFN++ QL +F + GL Sbjct: 61 YELKLGRQKFAGETHAYSVAWADDEIEEMVANCDKIIFNSIGQLERFAEA--TEGTIRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE KIE + ++G MFHNNCEN SF F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEKVMGQISGFMFHNNCENSSFELFDKMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+ FGH + Q++W+SLGGGIHFT + YP+ FC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 179 TIEERFGHLLEQVQWVSLGGGIHFTGEGYPLDAFCARLKAFSEKFGVQVYLEPGEAAITM 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N KNL +VDSS+EAH+ D L+Y+ +A + PN G ++ MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKNLAVVDSSIEAHMLDLLIYRLNAKMAPNDGEHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +REF +N Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDAAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVREFDFN 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYLSSLS 365 >gi|188587896|ref|YP_001920344.1| carboxynorspermidine decarboxylase [Clostridium botulinum E3 str. Alaska E43] gi|188498177|gb|ACD51313.1| carboxynorspermidine decarboxylase [Clostridium botulinum E3 str. Alaska E43] Length = 380 Score = 272 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 129/372 (34%), Positives = 217/372 (58%), Gaps = 8/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P YL+D++ L NL+ Y+++ G ++LA K F+ + F + +Y+ G TSSSL+ Sbjct: 10 LPSPCYLVDERLLKKNLERLNYVQEETGANIILATKAFSMYSTFPLIGKYLKGVTSSSLF 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ---KLHKKI 118 E LG+E+ G + H ++ AY+ E D ++ CD I+FN+ +Q +KD+ + + Sbjct: 70 EARLGYEEMGKQVHIFSPAYRQDEFDEIMKYCDHIVFNSFNQWKLYKDRVKTYSNKKIEC 129 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 G+RINP S + + +P SR+G ++ ++ ++GL FH CE S + Sbjct: 130 GIRINPEYSEIETDIYNPCFENSRMGVTLENFKIEDLDGIDGLHFHTMCEQNS-DTLART 188 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +K I+ +FG +I ++WI+ GGG H T +DY ++ + KY V IYLEPGEA+ Sbjct: 189 IKVIDNKFGKYIKNMKWINFGGGHHITREDYDMETLIDVILYIKNKYDVDIYLEPGEAVA 248 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCG 294 N+ L TVLD+ +N N+ IVD+S H+PD L I + P YT + Sbjct: 249 LNSGFLICTVLDVIKNGMNIAIVDTSAVCHMPDVLEMPYRPHIINSGMPNQYEYTYRLGA 308 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +CLAGD+ G++ F++P+K+GD+++F D+A Y++ + N FNGIN+P I + + ++ I Sbjct: 309 PTCLAGDVVGDYSFKEPLKVGDKLAFCDMAIYSMVKNNTFNGINLPAIVKYSDEKGVEII 368 Query: 355 REFSYNDYYNNL 366 ++F Y D+ + L Sbjct: 369 KKFGYEDFKSRL 380 >gi|118581021|ref|YP_902271.1| carboxynorspermidine decarboxylase [Pelobacter propionicus DSM 2379] gi|118503731|gb|ABL00214.1| carboxynorspermidine decarboxylase [Pelobacter propionicus DSM 2379] Length = 392 Score = 272 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 129/380 (33%), Positives = 204/380 (53%), Gaps = 16/380 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D +L +NL ++K +G K+L+ALK F+ W F +++ + G +SS +E Sbjct: 14 PSPAYVVDLGRLRHNLAILDNVQKRSGAKILMALKAFSMWSTFPLISRTLAGVCASSPWE 73 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--DKAQKLHKKIGL 120 LG E+FGGE H++ A+K+ ++ +L + ++FN++ QL +F+ +A+ + IGL Sbjct: 74 ARLGREEFGGEVHSFAAAFKERDVVELLEISNHLVFNSLGQLERFRPLWEAKHGNVSIGL 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSF 172 R+NP S + DP P SRLG + + V GL FH CE F Sbjct: 134 RVNPEHSEGHTAIYDPCAPCSRLGIPLAEFERRIGEVGEERALNGVEGLHFHTLCEQL-F 192 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 + E++FG F+ +++W++LGGG H T + Y + + F EKY + +YLE Sbjct: 193 QPLERTARAFEEKFGRFLPRMKWLNLGGGHHITREGYDIDGLVDLVSYFREKYDLTVYLE 252 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPY 288 PGEAI T L VLD+ N ++ I+D S H+PD L I + Sbjct: 253 PGEAIAIGTGILVGEVLDLVHNAMDIAILDLSATCHMPDILEMPYRPDIKNGFDPGEKAH 312 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-V 347 + + G SCLAGD+ G++ FE+P+ GDR++F D+A Y + + FNGI P I Sbjct: 313 SYRLAGPSCLAGDVIGDWSFERPLLPGDRLAFLDMAHYTMVKTTTFNGIQHPAICTYEPE 372 Query: 348 DGTIKAIREFSYNDYYNNLS 367 G +K +R F+Y D+ LS Sbjct: 373 TGELKVVRTFAYGDFRARLS 392 >gi|163869358|ref|YP_001610614.1| carboxynorspermidine decarboxylase [Bartonella tribocorum CIP 105476] gi|161019061|emb|CAK02619.1| carboxynorspermidine decarboxylase [Bartonella tribocorum CIP 105476] Length = 366 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 205/367 (55%), Positives = 269/367 (73%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDK KL+ N+ T +R+ +G K+LLALKCFA W +FD ++++MDGTTSSSL Sbjct: 2 MIKTPYYLIDKSKLIKNMQTISRLREMSGAKVLLALKCFATWSVFDLMSEFMDGTTSSSL 61 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID D IIFN++ QL +F D + GL Sbjct: 62 YELRLGKEKFGKETHAYSVAWADHEIDEACDYADKIIFNSIQQLQRFSDA--TKTIQRGL 119 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LA+P+RPFSRLGE + I+ + +NGLM HNNCEN F F+ ML Sbjct: 120 RLNPGISASHFDLANPSRPFSRLGETNQSAIKEVLPLINGLMIHNNCENADFNLFNQMLG 179 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++F + ++WISLGGGIHFT ++YP++ F +RLK FS+ + V ++LEPGEA +T Sbjct: 180 AMEEKFSELFSAVDWISLGGGIHFTAENYPLEAFAERLKHFSKTHGVTLFLEPGEAAITK 239 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL +VLD N KNL IVDSS+EAH+ D L+Y+E+A + PN G + M+CG+SCLAG Sbjct: 240 STTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIYRENAKLEPNQGEHEIMICGKSCLAG 299 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG F FEKP+KIGDR+SF+D AGY + +KNWFNG+ MP I +K DGT+ R+FSYN Sbjct: 300 DIFGTFQFEKPLKIGDRLSFQDAAGYTMVKKNWFNGVTMPAIVLKECDGTLTLQRQFSYN 359 Query: 361 DYYNNLS 367 DY +LS Sbjct: 360 DYRESLS 366 >gi|312961468|ref|ZP_07775970.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens WH6] gi|311284265|gb|EFQ62844.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens WH6] Length = 365 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 213/367 (58%), Positives = 276/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDKQKLL N+ Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKQKLLVNMQKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG +KF GE HAY+VA+ D EI+ +L NCD IIFN++SQL +F ++++ GL Sbjct: 61 YELKLGRQKFEGEAHAYSVAWADDEIEEMLDNCDKIIFNSISQLQRFAERSEGKT--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE KIE I+ ++G MFHNNCEN F F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPVKIEGVIEQISGFMFHNNCENGDFSLFDKMLG 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+ FG + +++W+SLGGGIHFT + Y + FC RLK FSEKY VQ+YLEPGEA +TN Sbjct: 179 TIEERFGALLHKVKWVSLGGGIHFTGEGYALDAFCARLKAFSEKYGVQVYLEPGEAAITN 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N KNL +VDSS+EAH+ L+Y+ +A + P+ G +T MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKNLAVVDSSIEAHLLALLIYRLNAKLAPSEGEHTVMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DGT++ +REF Y+ Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLKMPSIVVKQLDGTVEVVREFGYD 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYLSSLS 365 >gi|325277688|ref|ZP_08143260.1| carboxynorspermidine decarboxylase [Pseudomonas sp. TJI-51] gi|324097183|gb|EGB95457.1| carboxynorspermidine decarboxylase [Pseudomonas sp. TJI-51] Length = 365 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 215/367 (58%), Positives = 279/367 (76%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDK KLL+N++ Y+R+++G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +E+ LG +KF GETHAY+VA+ D E++ +L NCD IIFN++ QL +F D Q K GL Sbjct: 61 FELKLGRQKFAGETHAYSVAWADDEVEEMLENCDKIIFNSIGQLQRFAD--QSEGKVRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE KIE I ++G MFHNNCEN F F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEQVIGQISGFMFHNNCENGDFGLFDKMLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE+ FGH + Q+EW+SLGGGIHFT +DY V FC RLK F++ Y VQ+YLEPGEA +TN Sbjct: 179 HIEERFGHLLHQVEWVSLGGGIHFTGEDYAVDAFCARLKAFAQTYGVQVYLEPGEAAITN 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N K+L +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+IAVK +DG+++ +REF + Sbjct: 299 DIFGEYQFDRPLAIGDRLSFVDTAGYTMVKKNWFNGLKMPSIAVKQLDGSVEVVREFGFE 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYVSSLS 365 >gi|56695512|ref|YP_165860.1| carboxynorspermidine decarboxylase [Ruegeria pomeroyi DSS-3] gi|56677249|gb|AAV93915.1| carboxynorspermidine decarboxylase [Ruegeria pomeroyi DSS-3] Length = 392 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 122/368 (33%), Positives = 197/368 (53%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP +++D+ + NL I +G +L ALK F+ + + + QY+ GT +S +Y Sbjct: 26 VPTPCFVVDEVAIERNLKILRDISDRSGAHVLSALKAFSMFTLAPLVRQYLGGTCASGIY 85 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E++GGE + YK+ +ID +LS + IIFN+ +Q ++F +AQ ++GLR Sbjct: 86 EARLGREEYGGEVATFCAGYKEQDIDEILSLSNHIIFNSPAQKDRFLSRAQAAGVQVGLR 145 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + DP P SRLG +K V+GL H CE F Sbjct: 146 INPEHSEGEIAKYDPCAPCSRLGTPVSLLTPETLKGVDGLHMHTLCEQG-FEPLLRTWAA 204 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E + ++ ++W++ GGG H T DY LK ++ + +YLEPGEA+ + Sbjct: 205 VEPKLAPYLPGLKWLNFGGGHHITRADYDRDALIDFLKSLRARHGLDVYLEPGEAVALDA 264 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN-TGPYTAMVCGRSCLAG 300 L +LD+ N +L I D S H+PD + + +T + G SCLAG Sbjct: 265 GILVGEILDLPSNGMDLAITDISATCHMPDVIEAPYRPALMDEADSGHTYRLGGPSCLAG 324 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIREFSY 359 D+ G++ +++P+ IG R +F D A Y++ + N FNG+ +PTIA+ N ++ +R+F Y Sbjct: 325 DVIGDYTWDQPLTIGQRFAFLDQAHYSMVKTNTFNGVPLPTIALWNSKTDALRIVRQFDY 384 Query: 360 NDYYNNLS 367 +D+ + LS Sbjct: 385 SDFKDRLS 392 >gi|323486584|ref|ZP_08091905.1| hypothetical protein HMPREF9474_03656 [Clostridium symbiosum WAL-14163] gi|323399965|gb|EGA92342.1| hypothetical protein HMPREF9474_03656 [Clostridium symbiosum WAL-14163] Length = 383 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 132/378 (34%), Positives = 222/378 (58%), Gaps = 12/378 (3%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++KTPYYL+D+ L NL+ + AG K+LLA K F+ + ++ L +Y+ G+ +S L Sbjct: 7 LLKTPYYLVDETLLKQNLEILGEVSGRAGCKILLAQKAFSMFSVYPLLREYLAGSAASGL 66 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +E LGHE+FGGETH ++ AY++ E D +L D ++FN+ SQ+ K+ ++ + K GL Sbjct: 67 FEARLGHEEFGGETHVFSAAYREDEFDEILRYADHVVFNSPSQVKKYGERVKAAGKSAGL 126 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSFL 173 R+NP S + DP P SRLG ++ + + ++G FH CE S Sbjct: 127 RLNPECSTQEGHAIYDPCSPGSRLGTTKRNLESAGKFETELLPYLDGFHFHTLCEQNS-D 185 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 L +E++FG+++ +++W++LGGG H T +DY + + + + EKY ++IYLEP Sbjct: 186 ALETTLAVLEEKFGNYLPRLKWLNLGGGHHITREDYDRERLIRLILKLREKYGLEIYLEP 245 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYT 289 GEA+V N L +TVL+ EN + ++D+S H+PD L + P P+T Sbjct: 246 GEAVVLNAGFLVSTVLETMENGIEIAVLDTSAACHMPDVLEMPYRPPVLGGGEPGEKPHT 305 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 + G +CLAGD+ G++ F+ P+ G ++ F D+A Y + + N FNG+ +P++ ++++ G Sbjct: 306 YRLGGPTCLAGDVIGDYSFDTPLTEGKKVIFSDMALYTMVKNNTFNGMPLPSLVLRDLQG 365 Query: 350 TIKAIREFSYNDYYNNLS 367 + ++EF Y D+ LS Sbjct: 366 RFRPVKEFGYEDFKGRLS 383 >gi|33591910|ref|NP_879554.1| carboxynorspermidine decarboxylase [Bordetella pertussis Tohama I] gi|33598196|ref|NP_885839.1| carboxynorspermidine decarboxylase [Bordetella parapertussis 12822] gi|33603092|ref|NP_890652.1| carboxynorspermidine decarboxylase [Bordetella bronchiseptica RB50] gi|33566754|emb|CAE38967.1| carboxynorspermidine decarboxylase [Bordetella parapertussis] gi|33568723|emb|CAE34481.1| carboxynorspermidine decarboxylase [Bordetella bronchiseptica RB50] gi|33571554|emb|CAE41037.1| carboxynorspermidine decarboxylase [Bordetella pertussis Tohama I] gi|332381327|gb|AEE66174.1| carboxynorspermidine decarboxylase [Bordetella pertussis CS] Length = 365 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 204/367 (55%), Positives = 269/367 (73%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M+KTPYYLIDK+ LL NL+ IR+ +G K+LLALKCFA W +FD + +YMDGTTSSSL Sbjct: 1 MLKTPYYLIDKRALLQNLEVIRRIRERSGAKVLLALKCFATWSVFDLMREYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +EV LG EKFGGETHAY+VAY + +ID V++ D IIFN++SQL ++ +A + GL Sbjct: 61 FEVRLGREKFGGETHAYSVAYAEDDIDDVVACADKIIFNSLSQLERYAPRASAIP--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S + LA+P RPFSRLGE D+I + ++G M HNNCEN+ F F A+L Sbjct: 119 RLNPGISVSGYDLANPARPFSRLGETDLDRIAQAMPMIDGFMVHNNCENRDFTRFDALLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E +GH + QI WISLGGGIHFT+ Y + FC RL+ FSE+Y VQ+YLEPGEA +TN Sbjct: 179 ELEHRYGHLLGQINWISLGGGIHFTEPGYALDAFCDRLRRFSEQYGVQVYLEPGEAAITN 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 T TL TVLD+ N KNL IVD++ EAH+ D L+Y+ SA + P+ GP+ ++ G SCLAG Sbjct: 239 TATLEVTVLDVMRNEKNLAIVDAATEAHMLDLLIYRMSARVQPDQGPHRYVIYGNSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 D+FGEF FE P++ G RIS +D AGY + +KNWFNG+ MP IA++ +DG I+ +REF Y Sbjct: 299 DVFGEFSFESPLQPGSRISIQDAAGYTMVKKNWFNGVRMPAIAIRELDGEIRLVREFGYQ 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYVDSLS 365 >gi|307718013|ref|YP_003873545.1| carboxynorspermidine decarboxylase [Spirochaeta thermophila DSM 6192] gi|306531738|gb|ADN01272.1| carboxynorspermidine decarboxylase [Spirochaeta thermophila DSM 6192] Length = 385 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 125/373 (33%), Positives = 207/373 (55%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ + NL +++ G ++LLALK FA W + ++ Y+ GT +S ++ Sbjct: 14 VPSPCFVVDRDAVEENLKILDRVQREGGARVLLALKGFAMWSLAPLVSSYLSGTCASGVW 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--G 119 E LG E FGG Y AYK+ E+ +L+ D +IFN+ SQ +F +++ G Sbjct: 74 EARLGRECFGGIVSTYGPAYKEDEVRELLTLTDHLIFNSFSQWERFGPLVGSAPRRVEAG 133 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S + + DP+ P SRLG + ++GL FH CE A+L Sbjct: 134 IRVNPERSGAPAAIYDPSGPNSRLGVVRSRFRPELLDGISGLHFHTLCEQN-VDALEAVL 192 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + E+ FG F+ ++ W++ GGG H T DY V +++F +Y V +YLEPGEAI Sbjct: 193 QAFEERFGEFVPRMRWVNWGGGHHITRPDYDVDRLIDLVRDFRSRYGVDVYLEPGEAIAL 252 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 T L V+DI EN + ++D+S H+PD L ++ P PYT + G Sbjct: 253 GTGVLVAEVVDIVENGMRIAVLDTSATTHMPDVLEMPYRPEVWGAGLPGERPYTYRLGGI 312 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK-NVDGTIKAI 354 SCLAGD+ G++ F++P+++GDR+ F+D+A Y + + FNG+ +P+I + + + + + Sbjct: 313 SCLAGDVIGDYSFDRPLEVGDRLVFDDMAHYTMVKTTTFNGVKLPSIGIWSSKEQSFTLV 372 Query: 355 REFSYNDYYNNLS 367 R F Y ++ LS Sbjct: 373 RSFEYEEFKRRLS 385 >gi|319404893|emb|CBI78494.1| carboxynorspermidine decarboxylase [Bartonella rochalimae ATCC BAA-1498] Length = 365 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 209/367 (56%), Positives = 270/367 (73%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI TPYYLIDK KL+ N+ T ++R + VK+LLALKCFA W +FD ++QYMDGTTSSSL Sbjct: 1 MIGTPYYLIDKSKLIKNMKTIAHLRAISRVKVLLALKCFATWSLFDVMSQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID D IIFN++ QL +F + + GL Sbjct: 61 YELRLGKEKFGKETHAYSVAWADDEIDEACGYADKIIFNSIQQLKRFAN--TTKTIQRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LA+P+RPFSRLGE +D I+ + +NGLM HNNCEN F F+ ML Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQDAIKEVLPLINGLMIHNNCENSDFNLFNQMLN 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++F I+WISLGGGIHFT ++YP++D +RLK FS+ Y V ++LEPGEA +T Sbjct: 179 HIEEKFKELFVAIDWISLGGGIHFTAENYPLEDLAKRLKHFSQTYGVTVFLEPGEAAITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL +VLD N KNL IVDSS+EAH+ D L+Y+E+A + PN GPY MVCG+SCLAG Sbjct: 239 STTLEVSVLDTLYNKKNLAIVDSSIEAHMLDLLIYRENAKLEPNHGPYEIMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG F F +P+KIGD++SF+D AGY + +KNWFNG+ MP I +K +GT+ R+FSYN Sbjct: 299 DIFGTFQFPEPLKIGDKLSFQDAAGYTMVKKNWFNGVAMPAIVIKECNGTLTLQRQFSYN 358 Query: 361 DYYNNLS 367 DY N+LS Sbjct: 359 DYKNSLS 365 >gi|313205280|ref|YP_004043937.1| carboxynorspermidine decarboxylase [Paludibacter propionicigenes WB4] gi|312444596|gb|ADQ80952.1| carboxynorspermidine decarboxylase [Paludibacter propionicigenes WB4] Length = 376 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 130/372 (34%), Positives = 191/372 (51%), Gaps = 7/372 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y++D+ NNL +++ AGV+++LA K FA W F + +Y+ +T+SSL Sbjct: 6 IPSPCYVLDEATFRNNLALIKSVKERAGVEIILAFKAFAMWSTFPIVREYIPYSTASSLA 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L +E+ G + H Y AY D E ++ I FN++ Q +F + Q + GLR Sbjct: 66 EARLAYEEMGSKAHTYGPAYTDREFPEIMRCSSHITFNSLQQFERFYPQTQFENISCGLR 125 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + L +P P SRLG + + V GL FH CE+ SF L Sbjct: 126 INPEFSDVETDLYNPCAPGSRLGVVADLLGDKLPEGVEGLHFHTLCESTSFDMER-TLAV 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 +E++FG F QI W+++GGG T + Y V+ L+ F KY Q+ LEPG A Sbjct: 185 VEEKFGKFFPQINWLNMGGGHLMTKEGYDVEHLISLLQAFKAKYPHLQLILEPGSAFAWR 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 T L ++V+DI EN + H+PD L I G T + G Sbjct: 245 TGVLVSSVVDIVENKGIKTAMLDVSFACHMPDCLEMPYKPAIVGATDAIPGKPTYRMGGN 304 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 SCL+GD +G++ F+ +KIGDRI FED+ Y + + FNG++ P+I + K +R Sbjct: 305 SCLSGDFYGDWSFDHELKIGDRIIFEDMIHYTMVKTTMFNGVSHPSIGIWTKGNEFKLVR 364 Query: 356 EFSYNDYYNNLS 367 EF Y DY +S Sbjct: 365 EFGYEDYKGRMS 376 >gi|327439420|dbj|BAK15785.1| diaminopimelate decarboxylase [Solibacillus silvestris StLB046] Length = 397 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 149/371 (40%), Positives = 208/371 (56%), Gaps = 7/371 (1%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P +++D++ L NL ++ +LLALK F+ W F Y+ G TSSSL+E Sbjct: 28 PSPAFVVDERLLERNLKLLKSVQDRTNCDILLALKGFSMWSTFPMARNYLAGITSSSLFE 87 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGL 120 LG E+FG E HAY AY + EID L+ D I+FN+ QLNK+KDK + + IGL Sbjct: 88 ARLGFEEFGKEVHAYAPAYAEHEIDEYLTYVDHIVFNSFDQLNKYKDKVLNHEKNISIGL 147 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L DP SRLG + E+ V G+ FH CE +L Sbjct: 148 RVNPGYSEVETPLYDPCYINSRLGIPVESFRPDELDGVEGIHFHAMCEQG-AEVLERILV 206 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 + E+++G ++ Q++WI+ GGG H T Y V+ + E Y V++ LEPGEAI N Sbjct: 207 HFEEKYGEYLHQMKWINFGGGHHITKPGYDVELLVSLINRIQETYGVKVILEPGEAIALN 266 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L TVLDI +N L IVDSS H+PD L A I PN YT + G + Sbjct: 267 TGYLVATVLDIVQNGMELAIVDSSATCHMPDTLEMPYRAHIIGSGQPNEKAYTYRLGGMT 326 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGDI G++ F++P++ GD++ F D+A Y + + + FNG+N+P+I N +K IR Sbjct: 327 CLAGDIIGDYSFDEPLQAGDKLVFTDMAHYTMVKTHMFNGVNLPSICTYNEQDGVKVIRT 386 Query: 357 FSYNDYYNNLS 367 F Y DY N LS Sbjct: 387 FQYEDYRNRLS 397 >gi|146283566|ref|YP_001173719.1| carboxynorspermidine decarboxylase [Pseudomonas stutzeri A1501] gi|145571771|gb|ABP80877.1| carboxynorspermidine decarboxylase [Pseudomonas stutzeri A1501] Length = 365 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 215/367 (58%), Positives = 278/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDKQKLL NL+ Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKQKLLGNLEKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG +KF GETHAY+VA+ D EI+ +++NCD IIFN++ QL +F + GL Sbjct: 61 YELKLGRQKFAGETHAYSVAWADDEIEEMVANCDKIIFNSIGQLERFAEA--TEGTIRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S ++LADP RPFSRLGE KIE+ I ++G MFHNNCEN SF F ML Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEHDPAKIEAMIGKISGFMFHNNCENSSFELFDKMLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+ FGH + Q++W+SLGGGIHFT + YP+ FC RLK FSEK+ VQ+YLEPGEA +T Sbjct: 179 TIEERFGHLLEQVQWVSLGGGIHFTGEGYPLDAFCARLKAFSEKFGVQVYLEPGEAAITM 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + +L TVLD N KNL +VDSS+EAH+ D L+Y+ +A + PN G ++ MVCG+SCLAG Sbjct: 239 SASLEVTVLDTLYNGKNLAVVDSSIEAHMLDLLIYRLNAKMAPNDGEHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +REF +N Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDAAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVREFDFN 358 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 359 DYLSSLS 365 >gi|331005657|ref|ZP_08329024.1| putative carboxynorspermidine decarboxylase [gamma proteobacterium IMCC1989] gi|330420515|gb|EGG94814.1| putative carboxynorspermidine decarboxylase [gamma proteobacterium IMCC1989] Length = 395 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 128/383 (33%), Positives = 216/383 (56%), Gaps = 18/383 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P ++ID+ + NL Y+++ +G K+L ALK F+ W + +NQY+ G +S + Sbjct: 14 VPSPCFVIDEVAIERNLSVLNYVQEKSGAKVLAALKAFSCWHLAPLVNQYLSGICASGYH 73 Query: 62 EVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKL 114 E LG+E++ GE H ++ A+ E D VL + I+FN+ SQ K+ + A + Sbjct: 74 EARLGYEEYTKKGEQGEVHVFSAAFSQQEFDHVLPIANHIMFNSFSQWEKYKAQGMAHQQ 133 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + GLRINP S + DP SRLG + ++ ++GL FH CE Sbjct: 134 NIQFGLRINPQHSEGTTEIYDPCAAGSRLGIPISEFASKRLEGISGLHFHTLCEQG-LEP 192 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 L +E++F +++ ++WI+ GGG H + DY V+ + +K F++KY+VQ+YLEPG Sbjct: 193 LRRTLAAVEEKFSDYLSAMQWINFGGGHHISHPDYDVEGLIKLIKSFAKKYNVQVYLEPG 252 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG-------- 286 EAI + L + VLD+ ++ I+D+S H+PD L ++ + G Sbjct: 253 EAIAIRSGVLVSEVLDVMHTDRSQAILDTSATCHMPDTLEMPYRPDVFLSGGIKSGEANQ 312 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 PY + G +CLAGD+ ++ FE+P+++GDR+ F+D+A Y + + N FNGI +P IA+ Sbjct: 313 LPYNYRLGGMTCLAGDVISDYSFEEPLQVGDRLMFDDMAHYTMVKTNTFNGIRLPAIAIW 372 Query: 346 N-VDGTIKAIREFSYNDYYNNLS 367 N ++ +++F Y+D+ N LS Sbjct: 373 NSKSDKLEVVKQFDYDDFKNRLS 395 >gi|332283898|ref|YP_004415809.1| putative carboxynorspermide decarboxylase [Pusillimonas sp. T7-7] gi|330427851|gb|AEC19185.1| putative carboxynorspermide decarboxylase [Pusillimonas sp. T7-7] Length = 368 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 202/366 (55%), Positives = 276/366 (75%), Gaps = 2/366 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TPYYLIDK L NLDT YIRK++G K+LLALKCFA W +FD + ++MDGTTSSSLY Sbjct: 5 LPTPYYLIDKPALQRNLDTIDYIRKHSGAKVLLALKCFATWSVFDLMRRHMDGTTSSSLY 64 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LGH+KFGGETHAY+VA+ D EI+ V++NCD IIFN+++QL +F KAQ +GLR Sbjct: 65 EVKLGHQKFGGETHAYSVAFADHEIEEVVANCDKIIFNSINQLERFAPKAQGKP--MGLR 122 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP +S + F LADP R +SRLGE +I + + ++G+M HNNCEN F F +L Sbjct: 123 LNPGISCAGFDLADPARTYSRLGETDPARILAVVDQLDGVMIHNNCENSDFARFDDLLTQ 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E+ +G + +++W+SLGGGI FT +DYPV FCQRL+ F+++Y VQ+YLEPGEA V ++ Sbjct: 183 VEQTYGDILKRLKWVSLGGGISFTAQDYPVDVFCQRLRRFAQEYDVQVYLEPGEAAVRHS 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 TTL +VLD+ N K+L +VDSS EAH+ D L+Y+E+A + G + M+CG++CLAGD Sbjct: 243 TTLEVSVLDVGFNGKHLAVVDSSTEAHMLDLLIYRETAPVGDGIGEHEYMICGKTCLAGD 302 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 IFGE F P+K+GDRIS D AGY + +KNWFNG++MP+IA+K DG+++ +REFS++D Sbjct: 303 IFGEGRFAAPLKVGDRISIGDAAGYTMVKKNWFNGVHMPSIAIKEADGSMRVVREFSFDD 362 Query: 362 YYNNLS 367 Y N+LS Sbjct: 363 YVNSLS 368 >gi|222153445|ref|YP_002562622.1| carboxynorspermidine decarboxylase [Streptococcus uberis 0140J] gi|222114258|emb|CAR42867.1| putative carboxynorspermidine decarboxylase [Streptococcus uberis 0140J] Length = 375 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 134/371 (36%), Positives = 202/371 (54%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID+ +L+ NL+ ++ AG K+LLA K ++ + + + QY+ GTT+S LY Sbjct: 6 VPTPSYVIDEGQLIKNLEILKSVQDEAGCKILLAQKAYSLFATYPLIGQYLAGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LGHE+ GGE H + A+KD ++ +L D I+FN+ QL K + IGLR Sbjct: 66 EAKLGHEEMGGEVHVFAPAFKDHDMKELLEIADHIVFNSERQLRKHAEACHHAGVSIGLR 125 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP +S DP SR G ++ ++G FH CE LK Sbjct: 126 LNPEISTQNDHDQYDPCAYGSRFGVTESHFHPEVLELIDGFHFHTLCEQN-VDDLVTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 E +FG ++ Q++W++LGGG H T DY + Q +K E Y + IYLEPGEAI N Sbjct: 185 VFEAKFGSYLHQLKWLNLGGGHHITRADYDLPTLVQEIKRLKETYKIDIYLEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN + +I+D+S H+PD + + +T + + Sbjct: 245 AGYLATEVLDIVENGISTLILDASATCHMPDVIEMPYRPPLKDAFDAQEKAFTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GDI G++ FEK V+IG R+ F+D+A Y+ + N FNGI +P++ + + G I+ Sbjct: 305 CLTGDIIGDYSFEKAVEIGQRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDQSGDCHLIKS 364 Query: 357 FSYNDYYNNLS 367 F+Y D+ + LS Sbjct: 365 FTYEDFKSRLS 375 >gi|238927123|ref|ZP_04658883.1| carboxynorspermidine decarboxylase [Selenomonas flueggei ATCC 43531] gi|238885103|gb|EEQ48741.1| carboxynorspermidine decarboxylase [Selenomonas flueggei ATCC 43531] Length = 378 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 124/369 (33%), Positives = 193/369 (52%), Gaps = 7/369 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP YL+ ++ L NL + ++ G +LLA KCF+ + + + +Y+ GTT+S +Y Sbjct: 13 VPTPSYLVYEELLEKNLKVLAEVAEDTGAAILLAQKCFSMYHYYPLIGRYLAGTTASGIY 72 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+ G E H + AY+D EI+ + S CD IIFN+ SQ +F A+ G+R Sbjct: 73 EARLSQEEMGRENHVFKPAYEDEEIEQLASICDHIIFNSFSQWERFGTAARLHGVSCGMR 132 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + DP P SRLG K D E + ++GL FH CE L Sbjct: 133 INPECSTQDHAIYDPCAPGSRLGVKIADFREDLLAGLDGLHFHTLCEQG-ADALEETLDA 191 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E++FG ++ ++W++ GGG H T Y + + ++ EKY V +YLEPGEA+ N Sbjct: 192 VEEKFGKYLHGMKWLNFGGGHHITRVGYDISLLKKLIRRVQEKYHVAVYLEPGEAVALNA 251 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRSC 297 L + VLD+ ++ + H+PD + + +T + G +C Sbjct: 252 GFLVSEVLDVQAGGNVILNTSAV--CHMPDVIEMPYRPPVVGAGKAGERAHTYTLAGPTC 309 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 LAGD G + F+ P+ IGDR+ F D+A Y + + N FNG+ +P I + G + +R F Sbjct: 310 LAGDTIGTYSFDTPLCIGDRVVFGDMAIYTMVKNNTFNGMPLPHIIAVSPQGEWETVRTF 369 Query: 358 SYNDYYNNL 366 Y+D+ L Sbjct: 370 GYDDFKMRL 378 >gi|94985418|ref|YP_604782.1| carboxynorspermidine decarboxylase [Deinococcus geothermalis DSM 11300] gi|94555699|gb|ABF45613.1| carboxynorspermidine decarboxylase [Deinococcus geothermalis DSM 11300] Length = 408 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 124/388 (31%), Positives = 209/388 (53%), Gaps = 23/388 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 I +P +++D+ +L NL +++ +G ++++A K FA W +F L +Y G T+SSL Sbjct: 22 IPSPAFVLDESRLRRNLALISAVQRASGAQIIVAFKGFAMWSVFPLLREYGITGATASSL 81 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-----KAQKLH 115 E +L E+ GE H Y AY + + +L D I+FN+ +Q +F+ +A Sbjct: 82 NEAILAREELQGEVHVYAPAYSEEDFPRILDLADHIVFNSFAQWERFRPQVEAARAAGKA 141 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 +GLRINP + + L +P PFSRLG ++ + ++GL FH CE K Sbjct: 142 LHVGLRINPEYAEVETDLYNPAGPFSRLGVTRREFRPELLDGIDGLHFHTLCE-KDSDTL 200 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 L+ +E+ FG F+ ++ W++ GGG T + Y ++ + ++ F EK+ V + LEPG Sbjct: 201 ERTLEVVERNFGEFLPRMRWVNFGGGHLMTREGYDLERLVRVVRAFREKWDVHVILEPGS 260 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-------- 287 A T L ++VLD+ N+K++ I+D SV AH+PD L I P Sbjct: 261 AFGWQTGWLVSSVLDVIHNVKDIAILDISVSAHMPDVLEMPYRPRILGARDPGEGQETHR 320 Query: 288 --------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + ++ G +CLAGD+ GE+ F++P+ +GDR+ F+D+ Y + + +FNG+ Sbjct: 321 EAHDVPPGFPYIIGGTTCLAGDVVGEYVFDQPLNVGDRVVFDDMIHYTMVKTTFFNGVKH 380 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNLS 367 P I + + DGT + ++ F Y ++ LS Sbjct: 381 PDIGILHRDGTYERVKTFGYEEFKAKLS 408 >gi|291562597|emb|CBL41413.1| carboxynorspermidine decarboxylase [butyrate-producing bacterium SS3/4] Length = 377 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 130/372 (34%), Positives = 213/372 (57%), Gaps = 8/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID++KL NL+ ++ + G K+LLA K F+ + + + QY+DGTT+S L+ Sbjct: 6 LPTPCYVIDEKKLRKNLEILKKVKDDTGCKILLAQKAFSNFFEYPLIGQYLDGTTASGLF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG+EK G E H + A+K+ EI + C+ ++FN+ SQL K+ D ++ IG+R Sbjct: 66 EAKLGYEKMGKENHVFAPAFKESEIGEITDICEHLVFNSFSQLEKYADFCKEKGVSIGIR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 +NP S + DP P SRLG + E ++ ++G+ FH CE S LK Sbjct: 126 VNPECSTQGDHAIYDPCAPGSRLGVTLANFREDLVEKLDGIHFHTLCEQNSDD-LETTLK 184 Query: 181 NIEKEFGHF--ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +E++FG + + I+W+++GGG H T DY + + ++ E Y V +Y+EPGEA+ Sbjct: 185 AVEEKFGKYLKLPNIKWLNMGGGHHITRNDYDIDRLERCIRHMQETYDVTVYVEPGEAVA 244 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 N L T V+DI +N +I+D+S H+PD L + + YT + Sbjct: 245 LNAGYLVTEVMDIVDNGIRTLILDASAACHMPDVLEMPYRPPLKDSGEADEKQYTYRLSS 304 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +CLAGD+ G++ F+ ++IGDR+ FED+A Y++ + N FNG+ +P+IA + +G + Sbjct: 305 MTCLAGDVIGDYSFDHEIRIGDRLYFEDMAIYSMVKNNTFNGMCLPSIARMDENGECSVV 364 Query: 355 REFSYNDYYNNL 366 + F Y ++ L Sbjct: 365 KTFGYEEFVRRL 376 >gi|251779914|ref|ZP_04822834.1| carboxynorspermidine decarboxylase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084229|gb|EES50119.1| carboxynorspermidine decarboxylase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 380 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 129/372 (34%), Positives = 216/372 (58%), Gaps = 8/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P YL+D++ L NL+ Y+++ G ++LA K F+ + F + +Y+ G TSSSL+ Sbjct: 10 LPSPCYLVDERLLKKNLERLNYVQEETGANIILATKAFSMYSTFPLIGRYLKGVTSSSLF 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---I 118 E LG+E+ G + H ++ AY+ E D ++ CD I+FN+ +Q +KD+ + K Sbjct: 70 EARLGYEEMGKQVHIFSPAYRQDEFDEIMKYCDHIVFNSFNQWKLYKDRVKNYSNKKIEC 129 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 G+RINP S + + +P SR+G ++ ++ ++GL FH CE S + Sbjct: 130 GIRINPEYSEIETDIYNPCFENSRMGVTLENFKIEDLDGIDGLHFHTMCEQNS-DTLART 188 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +K I+ +FG +I ++WI+ GGG H T +DY ++ + KY V IYLEPGEA+ Sbjct: 189 IKVIDDKFGKYIKNMKWINFGGGHHITREDYDMETLLDIILYIKNKYDVDIYLEPGEAVA 248 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCG 294 N+ L T+LD+ +N N+ IVD+S H+PD L I + P YT + Sbjct: 249 LNSGFLVCTILDVIKNGMNIAIVDTSAACHMPDVLEMPYRPHIINSGMPNQYEYTYRLGS 308 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +CLAGD+ G++ F++P+K+GD++ F D+A Y++ + N FNGIN+P I + + ++ I Sbjct: 309 PTCLAGDVIGDYSFKEPLKVGDKLVFCDMAIYSMVKNNTFNGINLPAIVKYSDEKGVEII 368 Query: 355 REFSYNDYYNNL 366 ++F Y D+ + L Sbjct: 369 KKFGYEDFKSRL 380 >gi|254780741|ref|YP_003065154.1| carboxynorspermidine decarboxylase [Candidatus Liberibacter asiaticus str. psy62] gi|254040418|gb|ACT57214.1| carboxynorspermidine decarboxylase [Candidatus Liberibacter asiaticus str. psy62] Length = 367 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 367/367 (100%), Positives = 367/367 (100%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL Sbjct: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK Sbjct: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN Sbjct: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG Sbjct: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN Sbjct: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 Query: 361 DYYNNLS 367 DYYNNLS Sbjct: 361 DYYNNLS 367 >gi|319406376|emb|CBI80017.1| carboxynorspermidine decarboxylase [Bartonella sp. AR 15-3] Length = 365 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 207/367 (56%), Positives = 272/367 (74%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL+ N+ T ++R +GVK+LLALKCFA W +FD ++QYMDGTTSSSL Sbjct: 1 MIETPYYLIDKSKLIKNMKTIAHLRAISGVKVLLALKCFATWSLFDIMSQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID S D IIFN++ QL +F + + + GL Sbjct: 61 YELRLGKEKFGKETHAYSVAWADDEIDEACSYADKIIFNSIQQLQRFANA--TKNIQRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LA+P+RPFSRLGE +D I+ + +NGL+ HNNCEN +F F+ ML Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQDAIKKVLPLINGLLIHNNCENSNFNLFNQMLN 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE++F ++W+SLGGGIHFT ++YP++D +RLK FS+ Y + ++LEPGEA +T Sbjct: 179 QIEEKFKDLFVAVDWVSLGGGIHFTAENYPLEDLAERLKCFSQTYGITVFLEPGEAAITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL +VLD N KNL IVDSS+EAH+ D L+Y+E+A + PN GPY MVCG+SCLAG Sbjct: 239 STTLEVSVLDTLYNKKNLAIVDSSIEAHMLDLLIYRENAKLEPNHGPYEIMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG F F KP+KIGD++SF+D AGY + +KNWFNG+ MP I K +G + R+FSYN Sbjct: 299 DIFGTFQFPKPLKIGDKLSFQDAAGYTMVKKNWFNGVAMPAIVTKECNGVLTLQRKFSYN 358 Query: 361 DYYNNLS 367 DY N+LS Sbjct: 359 DYKNSLS 365 >gi|192360578|ref|YP_001981999.1| carboxynorspermidine decarboxylase [Cellvibrio japonicus Ueda107] gi|190686743|gb|ACE84421.1| carboxynorspermidine decarboxylase [Cellvibrio japonicus Ueda107] Length = 407 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 134/382 (35%), Positives = 209/382 (54%), Gaps = 17/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P ++IDK + +NL +++ +GVK+L ALK F+ W + QY+ GT +S L+ Sbjct: 27 VPSPCFVIDKAAVEDNLKILNRVQRESGVKVLGALKAFSCWSLAPLFRQYLSGTCASGLH 86 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QKLHK 116 E LG E+FGGE H Y+ AYK+ +++ +L D ++FN+V+Q +FK+ + ++ Sbjct: 87 EARLGREEFGGEVHCYSAAYKESDLEQILEIADHVLFNSVTQWQQFKNLSLAAQKRRPQL 146 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENK 170 GLRINP S L DP P SR+G + + + ++G FH C+ Sbjct: 147 AFGLRINPEHSEGDVPLYDPCAPCSRMGIPIASLDAAIVADPDFLQGISGFHFHTLCQQD 206 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 L + + FG + I WI+ GGG H + +DY V D LK F Y +Q+Y Sbjct: 207 -LPPLERTLNAVIRRFGKYFKHIHWINFGGGHHISREDYQVDDLIAMLKNFQANYDLQVY 265 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287 LEPGEA+ + L V+DI+ N I+D+S H+PD L A I P Sbjct: 266 LEPGEAVAIRSGVLVAEVVDITWNTVAQAILDTSATCHMPDVLEMPYRADILGAAMPNEL 325 Query: 288 -YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 +T + G +CLAGDI G++ F +P+++G R+ F+D+A Y + + FNGIN+P+IAV + Sbjct: 326 AHTYRLGGMTCLAGDIIGDYSFAQPLQVGQRLVFDDMAHYTMVKTTTFNGINLPSIAVWD 385 Query: 347 V-DGTIKAIREFSYNDYYNNLS 367 ++ IR+F Y D+ LS Sbjct: 386 SRTDELEVIRQFGYEDFKTRLS 407 >gi|325681251|ref|ZP_08160781.1| carboxynorspermidine decarboxylase [Ruminococcus albus 8] gi|324107173|gb|EGC01459.1| carboxynorspermidine decarboxylase [Ruminococcus albus 8] Length = 381 Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats. Identities = 137/370 (37%), Positives = 209/370 (56%), Gaps = 7/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP YL+ ++ L +N++ L +RK G K+LLA K F+ + + + Y+DGTT+S LY Sbjct: 12 LHTPCYLVSEKALKHNMEILLSVRKRTGCKILLAQKAFSMYSAYPLMRPYLDGTTASGLY 71 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIG 119 E LGH++FGGETH + AYK ++ ++ CD IIFN+ SQ +D +K G Sbjct: 72 EAKLGHDEFGGETHVFAPAYKHEDMAELVKICDDIIFNSFSQWRLHRDTVRKSGRRISCG 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R NP S + + +P SRLG ++ E+ + GL FH CE F+ + Sbjct: 132 IRCNPLYSEIETDIYNPCFTGSRLGVTPENFESGELDGIEGLHFHTMCEQG-ADVFARTV 190 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 +IEK FG ++ Q++W++ GGG H T Y V C+ + +KY+VQ+YLEPGEA Sbjct: 191 PHIEKHFGGYLGQMKWLNFGGGHHITKAGYDVDLLCRTVDYIQQKYAVQVYLEPGEACAL 250 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 N L T VLD N + IVD+S H+PD L + P+T + G Sbjct: 251 NAGWLVTQVLDTGRNGTDFAIVDTSAACHMPDVLEMPYRPELIGAGEKGEKPHTYRLGGP 310 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGDI G++ F+ P+K GDR+ F D+A Y++ + N FNG+ +P I ++ DG+ + ++ Sbjct: 311 TCLAGDIIGDYSFDAPLKAGDRLVFCDMAIYSMCKNNTFNGMPLPDIYLEKPDGSTELVK 370 Query: 356 EFSYNDYYNN 365 F Y D+ Sbjct: 371 HFGYEDFKQR 380 >gi|320333520|ref|YP_004170231.1| carboxynorspermidine decarboxylase [Deinococcus maricopensis DSM 21211] gi|319754809|gb|ADV66566.1| carboxynorspermidine decarboxylase [Deinococcus maricopensis DSM 21211] Length = 393 Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats. Identities = 131/375 (34%), Positives = 216/375 (57%), Gaps = 10/375 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+++LL NL+ ++ +G ++++A K FA W FDT+ Y+ G T+SSL Sbjct: 20 LPSPAFVLDERRLLRNLELIKRVQDESGARMIVAFKGFAMWSTFDTVRDYVYGATASSLN 79 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-----KAQKLHK 116 E +L E+ E H Y AY D E +L+ D I FN+ SQ +FKD +AQ H Sbjct: 80 EAILAREEMRKEVHVYAPAYSDAEFPDMLALADHITFNSFSQWARFKDQVMAARAQGRHI 139 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 +G+R+NP + L +P+ P+SRLG + + V+GL FH CEN S Sbjct: 140 GVGIRVNPEYAEVGTALYNPSMPYSRLGVTRAEFRPDLLDGVDGLHFHTLCENDS-SVLE 198 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 +L+ E+ FG F+ Q++W++ GGG T + Y ++ + +K+F E++ V + LEPG A Sbjct: 199 RVLEVFEQNFGEFLPQMKWVNFGGGHLMTREGYDIERLIRLVKDFRERHDVDVILEPGSA 258 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMV 292 T L ++VLD+ N K++VI+D SV AH+PD L I + P +T ++ Sbjct: 259 YGWQTGWLISSVLDVVRNEKDIVILDVSVSAHMPDVLEMPYRPGILNASEPGERAHTYLL 318 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G +CL+GD+ GE+ F+ P+++GDR+ F+D+ Y + + +FNG+ P I + DG + Sbjct: 319 GGTTCLSGDVVGEYSFDAPLRVGDRVIFDDMIHYTMVKTTFFNGVKHPDIGIWTKDGQYR 378 Query: 353 AIREFSYNDYYNNLS 367 ++ F Y ++ LS Sbjct: 379 HVKSFGYEEFKAKLS 393 >gi|187933334|ref|YP_001885214.1| carboxynorspermidine decarboxylase [Clostridium botulinum B str. Eklund 17B] gi|187721487|gb|ACD22708.1| carboxynorspermidine decarboxylase [Clostridium botulinum B str. Eklund 17B] Length = 380 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 133/372 (35%), Positives = 216/372 (58%), Gaps = 8/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P YL+D++ L NL+ Y++K G ++LA K F+ + F + +Y+ G TSSSL+ Sbjct: 10 LPSPCYLVDERLLKKNLERLNYVQKETGANIILATKAFSMYSTFPLIGKYLKGVTSSSLF 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---I 118 E LG+E+ G + H Y+ AY+ E D ++ CD IIFN+ +Q +KDK +K K Sbjct: 70 EARLGYEEMGKQVHIYSPAYRQDEFDEIMKYCDHIIFNSFNQWRLYKDKVKKYKNKKIEC 129 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 G+RINP S + + +P SR+G ++ ++ ++G+ FH CE S + Sbjct: 130 GIRINPEYSEIETDIYNPCFENSRMGVSLENFKSEDLYGIDGVHFHTMCEQNS-DTLART 188 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +K ++K FG +I +++W++ GGG H T +DY + + + KY + IYLEPGEA+ Sbjct: 189 IKVVDKNFGKYIKKMKWLNFGGGHHITREDYDINTLIETILYMKNKYEIDIYLEPGEAVA 248 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 N+ L TVLDI +N N+ IVD+S H+PD L I N Y + Sbjct: 249 LNSGFLVCTVLDIIKNGMNIAIVDTSAACHMPDVLEMPYRPHIINSGMSNQYEYAYRLGA 308 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +CLAGDI G++ F++P+K+GD++ F D+A Y++ + N FNGIN+P I + + ++ I Sbjct: 309 PTCLAGDIIGDYSFKEPLKVGDKLVFCDMAIYSMVKNNTFNGINLPAIVKYSDEKGVEII 368 Query: 355 REFSYNDYYNNL 366 ++F Y D+ + L Sbjct: 369 KKFGYEDFKSRL 380 >gi|254785712|ref|YP_003073141.1| carboxynorspermidine decarboxylase [Teredinibacter turnerae T7901] gi|237686123|gb|ACR13387.1| carboxynorspermidine decarboxylase [Teredinibacter turnerae T7901] Length = 395 Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats. Identities = 133/375 (35%), Positives = 217/375 (57%), Gaps = 11/375 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP Y++D+ ++ +NL +++K +G K+LLALK F+ + + + +Y+ G +S + Sbjct: 22 VQTPCYVVDECRVEHNLKILHHVQKASGAKVLLALKAFSMYSLAPLVMRYLHGVCASGIN 81 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-----HK 116 E LG E++ GE H Y A++ E D +++ + +IFN+VS+ +++ +A + + Sbjct: 82 EARLGREEYQGEVHTYCAAFRPHEFDDIVALSNHVIFNSVSEWQRYQARALEHLDARDNL 141 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 GLRINP S + + DP P SR+G ++ ++GL FH CE F + Sbjct: 142 AFGLRINPQHSEGETPMYDPCAPCSRMGIPLASLDGVDLTGISGLHFHTLCEQD-FAPLA 200 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 L +E++FGH +T++ WI+ GGG H T + Y V+ +R+K FS+ Y VQ+Y+EPGEA Sbjct: 201 RTLDAVEEKFGHLLTKMRWINFGGGHHITREGYNVEGLIERVKLFSKTYGVQVYIEPGEA 260 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMV 292 I N L T VLD N +L I D+S H+PD L I P P+T + Sbjct: 261 IALNAGVLITEVLDTLHNTMDLAITDTSATCHMPDVLEMPYRPRITGAGEPGEKPHTYRL 320 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTI 351 G SCLAGD+ G++ F++P++ G R+ FED+A Y + + FNGIN+P I V N + ++ Sbjct: 321 GGPSCLAGDVIGDYSFDEPLQPGSRLQFEDMAIYTMVKNTTFNGINLPDIMVWNSETQSL 380 Query: 352 KAIREFSYNDYYNNL 366 + ++ F Y D+ L Sbjct: 381 RLVKSFGYEDFKRRL 395 >gi|332701708|ref|ZP_08421796.1| carboxynorspermidine decarboxylase [Desulfovibrio africanus str. Walvis Bay] gi|332551857|gb|EGJ48901.1| carboxynorspermidine decarboxylase [Desulfovibrio africanus str. Walvis Bay] Length = 397 Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats. Identities = 120/385 (31%), Positives = 200/385 (51%), Gaps = 20/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP +++D++ + NL + ++LLALK FA W F + + + G T+SS + Sbjct: 14 VPTPCFVVDERLIERNLAVLRSVIDRTDCRILLALKGFAMWSTFPLIARSLHGCTASSPH 73 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--L 114 E L E+F E HA+ Y ++ + S CD I+FN+ +Q +++ ++ Sbjct: 74 EARLAREEFARGANEREVHAFAAGYSQADVRELASLCDHIVFNSFNQWKRYRKIVRESGR 133 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENK 170 + G+R+NP S + DP P SR+G KD ++S + GL FH CE Sbjct: 134 EVECGMRVNPEHSEGAVPIYDPCSPGSRMGVLRKDFQPAELDSPDGRIVGLHFHTLCEQN 193 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 + L ++E +FG F +++W++LGGG H + DY V + KY +Q+Y Sbjct: 194 -ADALARTLPHVEDKFGEFFPRLKWLNLGGGHHISRPDYDVDLLVNEVNRIKSKYGLQVY 252 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN------ 284 LEPGEAI +T L TVLD+ +N + I+D+S AH+PD L + Sbjct: 253 LEPGEAIALDTGVLVATVLDVIDNQGKIAILDTSAAAHMPDVLEMPYRPRCVLDGENAGA 312 Query: 285 --TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + + G SCLAGD+ G + F + +++GD+++F D+A Y++ + FNG+ +P+I Sbjct: 313 AGEKTHDYRLAGHSCLAGDVIGAYSFHRELQVGDKLAFMDMAIYSMVKTTTFNGLQLPSI 372 Query: 343 AVKNVDGTIKAIREFSYNDYYNNLS 367 A +G + ++ F Y D+ LS Sbjct: 373 AKITQEGEFRMVKRFGYEDFRGRLS 397 >gi|118590403|ref|ZP_01547805.1| carboxynorspermidine decarboxylase [Stappia aggregata IAM 12614] gi|118436866|gb|EAV43505.1| carboxynorspermidine decarboxylase [Stappia aggregata IAM 12614] Length = 365 Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats. Identities = 220/367 (59%), Positives = 271/367 (73%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI TPYYLIDK KLL N++ Y+R+ +G K LLALKCFA W +FD + YMDGTTSSSL Sbjct: 1 MIDTPYYLIDKAKLLRNMEKIAYVREKSGAKALLALKCFATWCVFDFMRDYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGHE+FG ETHAY+VAY D EID V+S+ D IIFN++SQL ++ DK+ GL Sbjct: 61 NEVRLGHERFGKETHAYSVAYADYEIDDVISHADKIIFNSISQLERYADKS--AGIVRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE KIE + ++G M HNNCEN F F ML Sbjct: 119 RLNPMVSSSSFDLADPARPFSRLGEWDVAKIEKVMDRISGFMIHNNCENADFSLFDRMLG 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE +FG + + EW+SLGGGIHFT DYP+ F RLK FSE Y VQ+YLEPGEA +T Sbjct: 179 DIETKFGALLHRAEWVSLGGGIHFTGDDYPLDLFADRLKAFSENYGVQVYLEPGEASITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL TTVLD N KNL IVD+S+EAH+ D L+Y+E+A + PN GP++ M+CG+SCLAG Sbjct: 239 STTLETTVLDTLFNGKNLAIVDASIEAHMLDLLIYRETAKVAPNEGPHSYMICGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF+F +K GDR+S +D AGY + +KNWFNG+ MP IAVK VDGT++ +REFSY Sbjct: 299 DIFGEFNFPAELKTGDRVSIQDAAGYTMVKKNWFNGVKMPAIAVKEVDGTVRVVREFSYQ 358 Query: 361 DYYNNLS 367 DY +LS Sbjct: 359 DYEQSLS 365 >gi|261414737|ref|YP_003248420.1| carboxynorspermidine decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371193|gb|ACX73938.1| carboxynorspermidine decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326289|gb|ADL25490.1| carboxynorspermidine decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 375 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 132/370 (35%), Positives = 206/370 (55%), Gaps = 6/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ +L N++ I+K GVK++ ALK ++ W F + +Y+ G T+SSL Sbjct: 7 VPSPCFVLDETRLRRNMEILDDIQKKTGVKIICALKGYSFWRSFPLIGEYLAGATASSLN 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+ E H + Y+D EIDA+L D I FN+ SQ ++KDK G+R Sbjct: 67 EARLAREEMNKEVHVFAPVYEDDEIDAILDAADHITFNSFSQWQRYKDKTLAHGVSAGIR 126 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S + L +P FSRLG K+ + ++GL FH CE +L Sbjct: 127 VNPEFSTVETDLYNPCGKFSRLGVTEKEFKPELLDGIDGLHFHALCEQD-ADALEGVLAA 185 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 EK FG ++ Q++W++ GGG H T KDY + + LK+FS +Y Q+ +EPGEAI Sbjct: 186 FEKHFGKYLPQMKWVNFGGGHHITRKDYHRDELVRILKDFSARYPHLQVIMEPGEAIGWQ 245 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L T+V DI N ++ I++ S+ AH+PD L ++ P +T + G S Sbjct: 246 TGELVTSVGDIVHNEMDIAILNVSISAHMPDCLEMPYRPSVIGAAFPGEKAHTYKLTGNS 305 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD G+F F++P+K+GDRI FED+ Y + + +FNG+ P+I + +G + + Sbjct: 306 CLAGDQLGDFSFDEPLKVGDRIIFEDMIHYTMVKTTFFNGVRHPSIGKFDENGKFHLLHK 365 Query: 357 FSYNDYYNNL 366 F+Y + L Sbjct: 366 FTYEQFKEKL 375 >gi|83854922|ref|ZP_00948452.1| NspC, carboxynorspermidine decarboxylase [Sulfitobacter sp. NAS-14.1] gi|83842765|gb|EAP81932.1| NspC, carboxynorspermidine decarboxylase [Sulfitobacter sp. NAS-14.1] Length = 364 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 212/366 (57%), Positives = 265/366 (72%), Gaps = 2/366 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPYYLIDK +L N++ ++R+ +G K LLALKCFA W +FD + QYMDG+TSSSLY Sbjct: 1 MKTPYYLIDKSRLQANMEKIAWLREASGAKSLLALKCFATWSVFDFMAQYMDGSTSSSLY 60 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+EKFGGETHAY+VAY D EI VL+N D IIFN++ QL++F A GLR Sbjct: 61 EVKLGYEKFGGETHAYSVAYDDDEIAEVLANSDKIIFNSIGQLDRFD--AASAGHTRGLR 118 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS S+F LADP RPFSRLGE +I + + GLMFHNNCEN F F+ ML Sbjct: 119 VNPGVSTSEFDLADPARPFSRLGEHDPAQIAAVADRITGLMFHNNCENDDFDRFADMLTL 178 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG I +++WISLGGGIHFT + YP+ RLK S+ Y VQ+YLEPGEA +T Sbjct: 179 IEDRFGDTIHRMDWISLGGGIHFTGEGYPLDRLAARLKTLSDTYGVQVYLEPGEAAITGA 238 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 TL TTVLD N KNL IVDSS+EAH+ D L+Y+E A + PNTG + M+CG+SCLAGD Sbjct: 239 ATLETTVLDTLHNGKNLAIVDSSIEAHMLDLLIYREPAKVAPNTGDHDWMICGKSCLAGD 298 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 IFGEF F+ P+K GDRISF+D AGY + +KNWFNG+ MP IA++ +DGTI ++R F Y D Sbjct: 299 IFGEFKFDTPLKPGDRISFQDAAGYTMVKKNWFNGVKMPGIAIRELDGTITSVRSFDYED 358 Query: 362 YYNNLS 367 + + LS Sbjct: 359 FKSALS 364 >gi|284038400|ref|YP_003388330.1| carboxynorspermidine decarboxylase [Spirosoma linguale DSM 74] gi|283817693|gb|ADB39531.1| carboxynorspermidine decarboxylase [Spirosoma linguale DSM 74] Length = 386 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 123/372 (33%), Positives = 195/372 (52%), Gaps = 7/372 (1%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +I +P +++++ KL NL+ +++ AGV ++LALK F+ + F + QY+ G T+SSL Sbjct: 16 VIPSPCFVLEEAKLRRNLELIDSVQRAAGVTIILALKGFSMYSAFPLVRQYLSGATASSL 75 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ L +E G + H Y AY+D D V+S + FN+ SQ +FKD+ G+ Sbjct: 76 NEIKLVNEYMGVQAHTYIPAYQDATFDEVVSRSSHLTFNSWSQWERFKDRVVGKPVSCGI 135 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + +P P SRLG + + + G+ FH CEN SF L+ Sbjct: 136 RVNPQYSEVATDMYNPCVPGSRLGANRDQLPDQLPEGLEGIHFHTLCENDSF-TLERTLE 194 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E F + + Q +W++ GGG T + Y L F +KY+V I LEPG AI Sbjct: 195 ALESRFDNLLHQAKWVNFGGGHLMTREGYDTNHLIGLLTAFRQKYNVDIILEPGSAIAWQ 254 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYP-----NTGPYTAMVCG 294 T L +TVLD+ + V + + AH+PD L I G T + G Sbjct: 255 TGVLVSTVLDVFNSQGIDVAILDTSFAAHMPDTLEMPYKPRIIHSYHEPVAGKPTYRLGG 314 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +CLAGD G++ F+KP+++GD + F+D+ Y + + FNG+N+P I V D + + + Sbjct: 315 MTCLAGDFMGDYSFDKPLEVGDTVVFDDMIHYTMVKTTTFNGVNLPAIGVWKEDESFQLV 374 Query: 355 REFSYNDYYNNL 366 + F Y + + L Sbjct: 375 KTFGYESFKDRL 386 >gi|319409446|emb|CBI83095.1| carboxynorspermidine decarboxylase [Bartonella schoenbuchensis R1] Length = 365 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 202/367 (55%), Positives = 269/367 (73%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDK KL+ N++ +R+ +G+K+LLALKCFA W +FD +++YMDG+TSSSL Sbjct: 1 MIKTPYYLIDKSKLIKNMEIIARLREMSGIKVLLALKCFATWSVFDFMSEYMDGSTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID V + D IIFN++ QL +F + + GL Sbjct: 61 YELRLGREKFGKETHAYSVAWADDEIDEVCTYADKIIFNSIQQLQRF--ASTTKTIQRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LA+P+RPFSRLGE + IE + +NGLM HNNCEN F F+ ML Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQSAIEEVLPLINGLMIHNNCENADFNLFNQMLN 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++F ++WISLGGGIHFT +YP++ +RLK FS+ Y+V ++LEPGEA +T Sbjct: 179 HIEEKFKKLFIAVDWISLGGGIHFTGNNYPLEALAERLKRFSQTYNVTVFLEPGEAAITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL +VLD N KNL IVDSS+EAH+ D L+Y+E+A + PN G + MVCG+SCLAG Sbjct: 239 STTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIYRENAKLEPNQGSHEIMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG F F + +KIGDR+SF+D AGY + +KNWFNG+ MP I +K +G + R+F+YN Sbjct: 299 DIFGTFQFPELLKIGDRLSFQDAAGYTMVKKNWFNGVAMPAIVIKECNGNLTIQRQFNYN 358 Query: 361 DYYNNLS 367 DY N+LS Sbjct: 359 DYKNSLS 365 >gi|126665111|ref|ZP_01736094.1| carboxynorspermidine decarboxylase [Marinobacter sp. ELB17] gi|126630481|gb|EBA01096.1| carboxynorspermidine decarboxylase [Marinobacter sp. ELB17] Length = 365 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 214/367 (58%), Positives = 277/367 (75%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M+KTPYYLIDK KLL NL+ +R+ +G K LLALKCFA WG+FD + YMDGTTSSSL Sbjct: 1 MLKTPYYLIDKSKLLRNLEIIARVREESGAKSLLALKCFATWGVFDLMQAYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LG +KF GETHAY+VAY D EI+ +L++ D IIFN++SQL +F + + ++ GL Sbjct: 61 NEVKLGKQKFAGETHAYSVAYADDEIEDILAHSDKIIFNSISQLQRFSEAS--ANQTRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RP SRLGE +KI + V+G MFHNNCEN SF F +L+ Sbjct: 119 RVNPGVSSSGFALADPARPHSRLGEHDPEKIAGILDQVSGFMFHNNCENASFERFDELLQ 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE FGH + + W+SLGGGIHFT + YP++ FCQRLK F+E+Y+VQ+YLEPGEA +T+ Sbjct: 179 VIETRFGHLLENVNWVSLGGGIHFTGEGYPLERFCQRLKAFAERYAVQVYLEPGEAAITH 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +T+L TVLD+ N K+L IVDSS+EAH+PD L+Y+ESA + PN G YT +CG SCLAG Sbjct: 239 STSLEVTVLDLLNNDKDLAIVDSSIEAHMPDLLIYRESAKLEPNRGNYTYQICGTSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF FEKP++IGD +SF+D AGY + +K+WFNG+ MP+IAVK +DG I+ ++ F Y+ Sbjct: 299 DIFGEFQFEKPLQIGDCLSFQDAAGYTMVKKSWFNGVKMPSIAVKQLDGRIELVKSFGYD 358 Query: 361 DYYNNLS 367 D+ LS Sbjct: 359 DFVQALS 365 >gi|86140068|ref|ZP_01058631.1| carboxynorspermidine decarboxylase [Roseobacter sp. MED193] gi|85823163|gb|EAQ43375.1| carboxynorspermidine decarboxylase [Roseobacter sp. MED193] Length = 389 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 122/368 (33%), Positives = 197/368 (53%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP +++D++ + NL + + +G +L ALK F+ + + + Y+ GT +S L+ Sbjct: 23 VPTPCFVVDEKAVERNLMVLADVAERSGAHVLAALKAFSMFSLAPLVCHYLSGTCASGLH 82 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E++GGE + YKD EI+ +++ D +IFN+V+Q ++F + Q K++GLR Sbjct: 83 EARLAREEYGGEVATFCAGYKDSEIEEIIALSDHMIFNSVAQKDRFLARCQAASKQVGLR 142 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + DP P SRLG + + V+GL H CE F + Sbjct: 143 INPEHSEGEIAKYDPCAPCSRLGTPISQLTAAALDGVDGLHMHTLCEQG-FAPLARTWAA 201 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE + G F+ Q++W++ GGG H T DY + E KY V +YLEPGEA+ + Sbjct: 202 IEPKLGPFLGQLKWLNFGGGHHITRDDYDRDALVDFILEIRSKYHVDVYLEPGEAVALDA 261 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY-PNTGPYTAMVCGRSCLAG 300 L VLD+ N +L I D S H+PD + + ++ G SCLAG Sbjct: 262 GILVGEVLDLPRNGVDLAITDISATCHMPDVIEAPYRPALLGEVETGHSYRFGGPSCLAG 321 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSY 359 D+ G++ +P++IGDR +F D A Y++ + N FNG+ +P I + N ++++++F Y Sbjct: 322 DVIGDYKMAQPLQIGDRFAFLDQAHYSMVKTNTFNGVALPAILLWNSQTDDLRSVKQFGY 381 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 382 ADFKERLS 389 >gi|291513891|emb|CBK63101.1| carboxynorspermidine decarboxylase [Alistipes shahii WAL 8301] Length = 379 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 127/374 (33%), Positives = 189/374 (50%), Gaps = 9/374 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++D++ L NL T +R+ +G ++++ALK A W +F L ++ DG T+SS Sbjct: 7 LPSPCYVLDEELLDRNLATVDRVRRESGAEIIVALKACAMWSIFPELAKHSDGATASSAA 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+FG H Y Y D ID +L+ D I FN++SQ +F KA GLR Sbjct: 67 EARLVFEEFGRPAHTYAPVYTDSNIDEILNCSDHITFNSLSQFRRFGQKALINGISCGLR 126 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIES--EIKNVNGLMFHNNCENKSFLCFSAML 179 INP S + L +P P SRLG + V GL FH CE++ L Sbjct: 127 INPQYSPVETDLYNPCVPGSRLGVTAEQLAAHGGLPAGVEGLHFHVLCESR-PEHLQKAL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 + +E FG ++ +I+W+++GGG T Y LK F ++ ++ LEPG A Sbjct: 186 EAVETHFGAYLDRIKWLNMGGGHLMTASWYDCDRLIALLKAFRSRHPNLRLILEPGSAFT 245 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIY----PNTGPYTAMVC 293 T L +TV DI EN + H+PD L + P G + Sbjct: 246 WRTGFLVSTVEDIVENGGVTTAMLDVSFACHMPDCLEMPYKPAVIGAHEPADGEKRWRMG 305 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G SCLAGD G++ F++ +K+G+R+ FED+ Y + + FNG++ P I + DG Sbjct: 306 GTSCLAGDYCGDWAFDRELKVGERVVFEDMIHYTMVKTTMFNGVHHPAIVIARRDGRTDV 365 Query: 354 IREFSYNDYYNNLS 367 IREF Y D+ N +S Sbjct: 366 IREFGYEDFRNRMS 379 >gi|319899498|ref|YP_004159595.1| carboxynorspermidine decarboxylase [Bartonella clarridgeiae 73] gi|319403466|emb|CBI77046.1| carboxynorspermidine decarboxylase [Bartonella clarridgeiae 73] Length = 365 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 209/367 (56%), Positives = 272/367 (74%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLIDK KL+ N+ T ++R +GVK+LLALKCFA W +FD ++QYMDGTTSSSL Sbjct: 1 MIRTPYYLIDKSKLIKNMKTIAHLRAISGVKVLLALKCFATWSLFDVMSQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID S D IIFN++ QL +F + + GL Sbjct: 61 YELRLGKEKFGKETHAYSVAWADDEIDEACSYADKIIFNSIQQLQRFANA--TKTIQRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LA+P+RPFSRLGE +D I+ + +NGLM HNNCEN F F+ ML Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQDAIKEVLPFINGLMIHNNCENSDFNLFNQMLN 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE++F ++W+SLGGGIHFT ++YP++D +RLK FS+ Y V ++LEPGEA +T Sbjct: 179 QIEEKFKELFIAVDWVSLGGGIHFTAENYPLEDLAERLKCFSQIYGVTVFLEPGEAAITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL +VLD N KNL IVDSS+EAH+ D L+Y+E+A + PN GPY MVCG+SCLAG Sbjct: 239 STTLEVSVLDTLYNKKNLAIVDSSIEAHMLDLLIYRENAKLEPNHGPYEIMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG F F +P+KIGD++SF+D AGY + +KNWFNG+ MP I +K +GT+ R+FSYN Sbjct: 299 DIFGTFKFPEPLKIGDKLSFQDSAGYTMVKKNWFNGVAMPAIVIKECNGTLTLQRQFSYN 358 Query: 361 DYYNNLS 367 DY N+LS Sbjct: 359 DYQNSLS 365 >gi|254510022|ref|ZP_05122089.1| carboxynorspermidine decarboxylase [Rhodobacteraceae bacterium KLH11] gi|221533733|gb|EEE36721.1| carboxynorspermidine decarboxylase [Rhodobacteraceae bacterium KLH11] Length = 389 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 123/368 (33%), Positives = 196/368 (53%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + P +++DK+ + NL + +G +L ALK F+ + + + QY+ GT +S +Y Sbjct: 23 VPAPCFVVDKKAIERNLSILSGVGTRSGAHVLCALKAFSMFSLAPLVRQYLAGTCASGIY 82 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E +GGE + YK +ID +LS D IIFN+ +Q N+F KAQ ++GLR Sbjct: 83 EARLGREDYGGEVATFCAGYKGADIDEILSLSDHIIFNSPAQKNRFLAKAQAAGVQVGLR 142 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + DP P SRLG + + V+GL H CE + Sbjct: 143 INPEHSEGEIPKYDPCAPCSRLGMPVSQLTAATLTGVDGLHMHTLCEQG-VEPLLRTWEA 201 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 ++ + F+++++W++ GGG H T DY +++ + Y + +YLEPGEA+ N Sbjct: 202 VQPKLAPFMSRLKWLNFGGGHHITRDDYDRDGLVAFIRDIRKTYDIDVYLEPGEAVALNA 261 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY-PNTGPYTAMVCGRSCLAG 300 L +LD+ N NL I D S H+PD + + +T + G SCLAG Sbjct: 262 GILVGEILDLPTNGMNLAITDISATCHMPDVIEAPYRPALMGEAEAGHTYRLGGPSCLAG 321 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSY 359 D+ G++ ++ P++IG R F D A Y++ + N FNG+ +P IA+ N + +K I++F Y Sbjct: 322 DVIGDYTWDHPLEIGQRFVFLDQAHYSMVKTNTFNGVPLPAIALWNSETDDLKIIKQFGY 381 Query: 360 NDYYNNLS 367 +D+ LS Sbjct: 382 DDFRQRLS 389 >gi|15806427|ref|NP_295133.1| carboxynorspermidine decarboxylase [Deinococcus radiodurans R1] gi|6459163|gb|AAF10976.1|AE001986_1 carboxynorspermidine decarboxylase [Deinococcus radiodurans R1] Length = 416 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 123/386 (31%), Positives = 205/386 (53%), Gaps = 21/386 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 I +P +++D+ +L NL Y+++ +G ++++A K F+ W F L +Y G T+SSL Sbjct: 32 IPSPAFVLDETRLRRNLTLINYVQQQSGAQIIVAFKGFSMWSTFPLLREYGITGATASSL 91 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-----KAQKLH 115 E +L E+ GE H Y AY D + +L D ++FN+ +Q +F+ +A Sbjct: 92 NEAILAKEEMQGEVHVYAPAYSDEDFPRILELADHLVFNSFAQWERFRPQVQAARAGGRE 151 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 +G+RINP + + L +P PFSRLG ++ E + ++GL FH CE K Sbjct: 152 LHVGIRINPEYAEVETDLYNPAGPFSRLGVTRREFREDLLDGIDGLHFHTLCE-KDSDTL 210 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 L+ +E+ FG F+ ++ W++ GGG T + Y + + +K F EK+ V + LEPG Sbjct: 211 ERTLEVVERNFGEFLPRMNWVNFGGGHLMTREGYDIPRLIRVVKAFREKHGVHVILEPGS 270 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-------- 287 A T L ++VLD+ N+K+ ++D SV AH+PD L I P Sbjct: 271 AFGWQTGWLVSSVLDVVHNVKDAALLDVSVSAHMPDVLEMPYRPRILGAGDPPLDDHREA 330 Query: 288 ------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 Y ++ G +CLAGD+ GE+ F +K+G R+ F+D+ Y + + +FNG+ P Sbjct: 331 QDTGSGYPYIIGGTTCLAGDVVGEYVFPHELKVGSRVVFDDMIHYTMVKTTFFNGVKHPD 390 Query: 342 IAVKNVDGTIKAIREFSYNDYYNNLS 367 I + + DG+ + ++ F Y ++ LS Sbjct: 391 IGILHADGSYERVKTFGYEEFKAKLS 416 >gi|254488768|ref|ZP_05101973.1| NspC [Roseobacter sp. GAI101] gi|214045637|gb|EEB86275.1| NspC [Roseobacter sp. GAI101] Length = 370 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 215/366 (58%), Positives = 265/366 (72%), Gaps = 2/366 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPYYLIDK +LL NL+ ++R +G K LLALKCFA W +FD + QYMDG+TSSSLY Sbjct: 7 LQTPYYLIDKARLLPNLEKIAWLRAESGAKSLLALKCFATWSVFDFMAQYMDGSTSSSLY 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LGHEKF GETHAY+VAY D EI VL+ D IIFN++ QL KF D AQ GLR Sbjct: 67 EVRLGHEKFPGETHAYSVAYADHEIAEVLACSDKIIFNSIGQLTKFADAAQGHI--KGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS S+F LADP RPFSRLGE D+I + ++GLMFHNNCEN SF F ML Sbjct: 125 VNPGVSTSEFDLADPARPFSRLGEHDPDQIAAVADQISGLMFHNNCENDSFERFDEMLTL 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG I ++WISLGGGIHFT DYP+ RLK F++ Y VQ+YLEPGEA +T Sbjct: 185 IEGRFGAVIRDMDWISLGGGIHFTGADYPLDRLAARLKSFAQTYGVQVYLEPGEAAITGA 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 TL TVLD N KNL IVDSS+EAH+ D L+Y+E A I P+TG + M+CG+SCLAGD Sbjct: 245 ATLEVTVLDTMYNGKNLAIVDSSIEAHMLDLLIYREPAKISPDTGDHEWMICGKSCLAGD 304 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 IFGEF F+ P+K GDR+SF+D AGY + +KNWFNG+ MP IA++ +DGT + +R+F Y+D Sbjct: 305 IFGEFRFDAPLKAGDRLSFQDAAGYTMVKKNWFNGVKMPGIAIRELDGTTRLVRDFDYDD 364 Query: 362 YYNNLS 367 + LS Sbjct: 365 FAAALS 370 >gi|260913630|ref|ZP_05920106.1| carboxynorspermidine decarboxylase [Pasteurella dagmatis ATCC 43325] gi|260632169|gb|EEX50344.1| carboxynorspermidine decarboxylase [Pasteurella dagmatis ATCC 43325] Length = 371 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 215/370 (58%), Positives = 280/370 (75%), Gaps = 6/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPYYLIDK KLL N++ Y+R+ +G K LLALKCFA WG+FD ++QYMDGTTSSSLY Sbjct: 4 LQTPYYLIDKSKLLRNMEKIAYLREKSGAKALLALKCFATWGVFDFMSQYMDGTTSSSLY 63 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG EKFGGETHAY+VAY + EID V++N D IIFN+++QL +F ++ L GLR Sbjct: 64 EVQLGKEKFGGETHAYSVAYSNEEIDEVVANADKIIFNSINQLQRFANRTGDLP--RGLR 121 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS S F+LADP RP+SRLGE +KI + + G MFHNNCEN+ F F ML Sbjct: 122 VNPRVSTSSFLLADPARPYSRLGEWDINKIREVMPLITGFMFHNNCENEDFDKFCEMLDR 181 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE EFG + Q++W+SLGGGIHFT ++YP++ F +RLK+FS+K++VQ+YLEPGEA +T + Sbjct: 182 IENEFGELLHQVKWVSLGGGIHFTGENYPLEAFAERLKQFSDKFAVQVYLEPGEASITLS 241 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRSC 297 T+L TVLDI N K L IVD++ EAH+ D L+Y+ A + P+ G Y MVCG+SC Sbjct: 242 TSLEVTVLDILNNGKELAIVDAATEAHMLDLLIYRSEAKLLPDAFKGKGEYEYMVCGKSC 301 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 LAGDIFGE+HFEKP+KIGDRISF D AGY + +KNWFNG+NMP I +K +DG+++ ++EF Sbjct: 302 LAGDIFGEYHFEKPLKIGDRISFCDAAGYTMVKKNWFNGVNMPAIVIKELDGSVRVVKEF 361 Query: 358 SYNDYYNNLS 367 Y DY +LS Sbjct: 362 GYQDYVESLS 371 >gi|313157700|gb|EFR57111.1| carboxynorspermidine decarboxylase [Alistipes sp. HGB5] Length = 376 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 126/372 (33%), Positives = 196/372 (52%), Gaps = 8/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++D++ L NL +R+ +G ++++ALK A W +F L ++ DG T+SS Sbjct: 7 LPSPCYVLDEELLDRNLAIIDRVRRESGAEIIVALKACAMWSIFPELARHSDGATASSAA 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+FG H Y Y D I+ +L D I FN+V+Q +F A GLR Sbjct: 67 EARLVFEEFGRPAHTYAPVYTDRNIEEILRCSDHITFNSVAQFERFGPMALLRGISCGLR 126 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + L +P P SRLG D ++ ++GL FH CE++ L+ Sbjct: 127 INPQYSPVETDLYNPCVPGSRLGVTA-DLLKELPAGIDGLHFHVLCESR-PHHLRLALEA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 +EK FG ++ +I+W+++GGG T +Y + L+EF ++ ++ LEPG A Sbjct: 185 VEKHFGQYLDRIKWLNMGGGHLMTHAEYDCDELIALLREFKARHPHLRLILEPGSAFTWR 244 Query: 241 TTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 T L +T+ D + + V++D S H+PD L I P G + G Sbjct: 245 TGYLVSTIEDLVENAGVHTVMLDVSFACHMPDCLEMPYKPAIVGAHEPAEGEKRWRMGGT 304 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 SCLAGD +G++ F+ +K+G+RI FED+ Y + + FNG+ P I + DG I +R Sbjct: 305 SCLAGDYYGDWTFDHELKVGERIVFEDMIHYTMVKTTMFNGVAHPAIVIARRDGRIDVVR 364 Query: 356 EFSYNDYYNNLS 367 EF Y D+ N +S Sbjct: 365 EFGYEDFRNRMS 376 >gi|313672850|ref|YP_004050961.1| carboxynorspermidine decarboxylase [Calditerrivibrio nitroreducens DSM 19672] gi|312939606|gb|ADR18798.1| carboxynorspermidine decarboxylase [Calditerrivibrio nitroreducens DSM 19672] Length = 394 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 133/373 (35%), Positives = 212/373 (56%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +++P YLI + + N I++ G ++LLALK FA +F + +Y+DG +S Y Sbjct: 23 VESPSYLISEDLIEENCKILHSIKERTGARILLALKAFALPEVFPIIGKYLDGVCASGPY 82 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E+FG E H ++ AY D I V++ D ++FN+++Q K++D + K+IGLR Sbjct: 83 EARLGREEFGKEVHTFSPAYTDETIKDVIATSDHVVFNSLNQFYKYRDLVKDAGKEIGLR 142 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S + L DP + SR G D +++++++GL FH C+ ++ + Sbjct: 143 VNPGYSEVEIPLYDPCQVGSRFGVLSDDIKNADLESLDGLHFHAMCQQN-ADVLEKIVVS 201 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--VQIYLEPGEAIVT 239 +K F I +++W++ GGG H T Y + +K F Y +IYLEPGEA+V Sbjct: 202 FKKRFDDVIKKVKWVNFGGGHHITRDGYDREKLVSIIKNFYSDYPNIQKIYLEPGEAVVF 261 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295 N L +TVLDI +N + I+D+S E H+PD L I PYT + G Sbjct: 262 NAGVLVSTVLDIIKNGMEIAILDTSAENHMPDVLAMPYRPEIFGSGLVGENPYTYRLGGV 321 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAI 354 +CLAGD+ G++ F+ P+K+GDR+ F D+A Y+ + FNGI++P++ V N +G +K + Sbjct: 322 TCLAGDVIGDYSFKNPLKVGDRLVFTDMALYSFVKNTMFNGIHLPSLVVFNLKNGKLKVV 381 Query: 355 REFSYNDYYNNLS 367 R F Y+DY +S Sbjct: 382 RRFGYHDYKGRVS 394 >gi|239994540|ref|ZP_04715064.1| Carboxynorspermidine decarboxylase [Alteromonas macleodii ATCC 27126] Length = 391 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 132/371 (35%), Positives = 204/371 (54%), Gaps = 9/371 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y++++ KL+ NL+ ++ +G +++LALK F+ W FD + QY+ G T+SS++ Sbjct: 25 IPSPCYVLEEAKLIKNLELMKRVQDESGARIILALKGFSMWSCFDIIKQYLHGATASSVW 84 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L + G E HAY+ AYK + + + + FN+++Q N KD +GLR Sbjct: 85 EAKLA-AEMGKEVHAYSPAYKVNDAKELAGLVNHLSFNSLTQWNAHKDV--LAGVSLGLR 141 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP + L DP P SRLG + + +++ + G HN CE SF L+ Sbjct: 142 INPEHQEADTPLYDPAAPGSRLGIRASELEGADLSGIEGFHCHNLCECDSFATART-LEA 200 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 IEK FG ++ Q++W++LGGG T + Y V+ LK+F +Y + LEPG A+ Sbjct: 201 IEKRFGKWLGQLKWLNLGGGHLMTREGYDVEHLINTLKDFKARYPHLDVILEPGSAVAWQ 260 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L V+D+ EN ++ I+D S AH+PD L TI P+ Y + G S Sbjct: 261 TGPLICEVVDMVENDGDIAILDISATAHMPDVLEMPYRPTILSAGMPDEKAYNVKLGGNS 320 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ + F+ P+K GDR+ FED+ Y + + +FNG+ P I + +G + +RE Sbjct: 321 CLAGDVIDTYSFDAPLKAGDRLQFEDMMHYTMVKTTFFNGVEHPAIGILRSNGDFELVRE 380 Query: 357 FSYNDYYNNLS 367 FSY D+ LS Sbjct: 381 FSYEDFKGRLS 391 >gi|109897074|ref|YP_660329.1| carboxynorspermidine decarboxylase [Pseudoalteromonas atlantica T6c] gi|109699355|gb|ABG39275.1| carboxynorspermidine decarboxylase [Pseudoalteromonas atlantica T6c] Length = 375 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 128/371 (34%), Positives = 199/371 (53%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+ ++ KL NL +++ +GV+++LALK F W FD + QY+ G+T+S+++ Sbjct: 6 IPSPCYVCEEAKLEANLQLMQRVQQESGVEIILALKGFPMWSTFDLVKQYLQGSTASAVW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E+ G + HA++ A+K +ID ++ D I FN+ Q N+FK + + + G+R Sbjct: 66 EARLGKEEIGKQVHAFSPAFKPADIDQLVDLVDHISFNSFGQWNRFKAQILQSNVSPGIR 125 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +N + L DP+ P SR G KD +++ + G HN CE SF +L Sbjct: 126 LNAEHREADTELYDPSAPGSRFGILAKDLKGADLSGLEGFHIHNLCECDSFATERTILAV 185 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 E +FG + QI+WI+ GGG T Y V+ LK F ++ + LEPG A+ Sbjct: 186 EE-KFGQYFEQIKWINFGGGHLMTKDGYDVEHLIATLKAFKARHPHLNVILEPGSAVAWQ 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L V+DI EN + IVD S AH+PD L + N +T G S Sbjct: 245 TGPLVCEVIDIVENRDKIAIVDMSATAHMPDVLEMPYRPDVRGAGKANEKAFTYRFGGNS 304 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD + F+ ++IG+RI FED+ Y + + +FNG+ P+I + +G + +R+ Sbjct: 305 CLTGDAIDLYSFDHELQIGERIIFEDMIHYTMVKTTFFNGVEHPSIGILRKNGEFELVRK 364 Query: 357 FSYNDYYNNLS 367 F Y D+ N LS Sbjct: 365 FEYEDFKNKLS 375 >gi|317057515|ref|YP_004105982.1| carboxynorspermidine decarboxylase [Ruminococcus albus 7] gi|315449784|gb|ADU23348.1| carboxynorspermidine decarboxylase [Ruminococcus albus 7] Length = 381 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 138/370 (37%), Positives = 209/370 (56%), Gaps = 7/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP YL+ ++ L +N++ L +RK G K+LLA K F+ + + + Y+DGTT+S LY Sbjct: 12 LRTPCYLVSEKALKHNMEILLSVRKRTGCKILLAQKAFSMYAAYPMMRPYIDGTTASGLY 71 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIG 119 E LGHE+FGGETH ++ AYK ++ ++ CD IIFN+ SQ K G Sbjct: 72 EARLGHEEFGGETHVFSPAYKKEDMAELVKICDDIIFNSFSQWKLHRGNVKNCGRKVSCG 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R NP S + +P SRLG ++ E+ + GL FH CE + + Sbjct: 132 IRCNPLYSEIDTDIYNPCFTGSRLGVTPENFESGELDGIEGLHFHTMCEQG-ADVLARTI 190 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 +IEK FG +I Q++W++LGGG H T Y V C+ + +KY VQ+YLEPGEA Sbjct: 191 PHIEKHFGSYIKQMKWVNLGGGHHITKAGYDVDLLCRTVDSIQQKYGVQVYLEPGEACAL 250 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 N L T VLDI +N IVD+S H+PD L I + + G Sbjct: 251 NAGWLVTEVLDIGKNGIEFAIVDTSAACHMPDVLEMPYRPEIIGAGKEGEKKFCYRLGGP 310 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGDI G++ F++P+K GDR+ F D+A Y++ + N FNG+ +P I ++ +DG++++++ Sbjct: 311 TCLAGDIIGDYAFDEPLKAGDRLVFCDMAIYSMCKNNTFNGMPLPEIYLEKLDGSVESVK 370 Query: 356 EFSYNDYYNN 365 F Y D+ Sbjct: 371 RFGYEDFKCR 380 >gi|262199658|ref|YP_003270867.1| carboxynorspermidine decarboxylase [Haliangium ochraceum DSM 14365] gi|262083005|gb|ACY18974.1| carboxynorspermidine decarboxylase [Haliangium ochraceum DSM 14365] Length = 399 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 137/381 (35%), Positives = 210/381 (55%), Gaps = 16/381 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP YL D +L NL+ ++ A K+LLALK FA W +F + +Y+ G +SS+ Sbjct: 20 LETPVYLCDLGRLRKNLEILADAQRRAECKILLALKGFAMWSVFPIVREYLSGVATSSVA 79 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKL 114 E LG E+F G E HAY AY D +ID ++ D I+FN+V+Q + + +A Sbjct: 80 EARLGREEFCGDSDRFEVHAYAPAYTDADIDELVELSDHIVFNSVAQWQRHGPRVRAAGR 139 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---EIKNVNGLMFHNNCENKS 171 + LR+NP S + L DP FSRLG ++ E+ ++GL FH CE S Sbjct: 140 DIECALRLNPRHSEVEVALYDPCASFSRLGITPENFPAPGAPELDGISGLHFHTLCELGS 199 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231 + +E+ FG + ++ W++ GGG H T DY ++ + ++ F +++ V +YL Sbjct: 200 -DALERTVAAVEERFGEHLGKVRWVNFGGGHHITRPDYDIERLVRVVRGFQDRHGVAVYL 258 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP---- 287 EPGEAI NT L +VLD+ N NL I+D+S AH+PD L I P Sbjct: 259 EPGEAIALNTGVLVASVLDVGHNDMNLAILDTSATAHMPDVLEMPYRPVITGAGAPGELA 318 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 +T + G +CLAGD+ G++ F +P+++GD++ F D+A Y + + FNG+ +P IA Sbjct: 319 HTYRLGGLTCLAGDVIGDYSFAEPLQVGDKLVFGDMAHYTMVKNTTFNGVRLPDIATYEP 378 Query: 348 D-GTIKAIREFSYNDYYNNLS 367 D ++ +R F Y DY N LS Sbjct: 379 DTQAVEVVRRFGYEDYKNRLS 399 >gi|332142513|ref|YP_004428251.1| carboxynorspermidine decarboxylase [Alteromonas macleodii str. 'Deep ecotype'] gi|327552535|gb|AEA99253.1| carboxynorspermidine decarboxylase [Alteromonas macleodii str. 'Deep ecotype'] Length = 376 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 133/371 (35%), Positives = 206/371 (55%), Gaps = 9/371 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y++++ KL+ NL+ +++ +G +++LALK F+ W FD + QY+ G T+SS++ Sbjct: 10 IPSPCYVLEEAKLIRNLELMKRVQEESGARIILALKGFSMWSCFDIIKQYLHGATASSVW 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L + G E HAY+ AYK + + + + FN++SQ N K + +GLR Sbjct: 70 EAKLA-AEMGKEVHAYSPAYKANDAKELAGLVNHLSFNSLSQWN--THKEALANVSLGLR 126 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP + L DP P SRLG + + + ++ + G HN CE SF L+ Sbjct: 127 INPEHQEADTPLYDPAAPGSRLGIRASELEDVDLTGIEGFHCHNLCECDSFATART-LEA 185 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 IEK FG ++ Q++W++LGGG T + Y V LK+F +YS + LEPG A+ Sbjct: 186 IEKRFGKWLGQLKWLNLGGGHLMTSEGYDVDHLISTLKDFKTRYSHLDVILEPGSAVAWQ 245 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L V+D+ EN ++ I+D S AH+PD L TI P+ Y + G S Sbjct: 246 TGPLICEVVDMVENDGDIAILDISATAHMPDVLEMPYRPTILGAGMPDEKAYNVKLGGNS 305 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ + F++P+K GDR+ FED+ Y + + +FNG+ P I + +G + +RE Sbjct: 306 CLAGDVIDTYSFDEPLKAGDRLQFEDMMHYTMVKTTFFNGVEHPAIGILRANGDFELVRE 365 Query: 357 FSYNDYYNNLS 367 FSY D+ LS Sbjct: 366 FSYEDFKGRLS 376 >gi|226355695|ref|YP_002785435.1| carboxynorspermidine decarboxylase [Deinococcus deserti VCD115] gi|226317685|gb|ACO45681.1| putative carboxynorspermidine decarboxylase [Deinococcus deserti VCD115] Length = 393 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 119/389 (30%), Positives = 204/389 (52%), Gaps = 24/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 I +P +++D+ +L NL +++ +G ++++A K FA W F L +Y G T+SSL Sbjct: 6 IPSPAFVLDESRLRRNLSLISQVQRESGAQIIVAFKGFAMWSAFPLLREYGITGATASSL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK---- 116 E +L ++ GE H Y AY D + +L D ++FN+ Q +F+ + Q + Sbjct: 66 NEAILARQEMQGEVHVYAPAYSDEDFPRILELADHLVFNSFGQWERFRPQVQAAREQGRV 125 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 +G+R+N + L +P PFSRLG ++ E + V+GL FH+ CEN S Sbjct: 126 LHVGIRVNHEYGEVETDLYNPAGPFSRLGVTRREFREDLLDGVDGLHFHSLCENDSTTLE 185 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 ++ E++FG F+ +++W++ GGG T Y + + +++F ++ V + LEPG Sbjct: 186 RTLVA-FEEKFGEFLGRMKWVNFGGGHLMTRAGYDIPRLIRVIRDFKARHDVHVILEPGS 244 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-------- 287 A T L ++VLD+ N+K+ ++D SV AH+PD L I P Sbjct: 245 AFGWQTGWLVSSVLDVVHNVKDAAVLDVSVSAHMPDVLEMPYRPRILGAGDPPEQGQHRS 304 Query: 288 ---------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + ++ G +CLAGD+ GE+ F +P+++GDR+ F+D+ Y + + +FNG+ Sbjct: 305 DDGTAVAAGHPYIIGGTTCLAGDVIGEYIFPQPLQVGDRVVFDDMIHYTMVKTTFFNGVK 364 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 P I + DG I+ F Y ++ LS Sbjct: 365 HPDIGILRPDGRYDRIKTFGYEEFKAKLS 393 >gi|34556614|ref|NP_906429.1| carboxynorspermidine decarboxylase (nspC) [Wolinella succinogenes DSM 1740] gi|34482328|emb|CAE09329.1| CARBOXYNORSPERMIDINE DECARBOXYLASE (NSPC) [Wolinella succinogenes] Length = 379 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 131/374 (35%), Positives = 215/374 (57%), Gaps = 9/374 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y++++ KL NL+ +++ +G K+LLALK FA W F ++ Y+ G T+S L+ Sbjct: 7 IPTPCYVLEEAKLRANLEILDRVQRESGAKILLALKGFALWKSFPLVSSYLKGITASGLH 66 Query: 62 EVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--I 118 E LG E+F GGE H Y+ A+K+ EI +++ D IIFN+ +Q +FKD+ + + Sbjct: 67 EAKLGKEEFRGGEVHVYSPAFKEPEIKELITFADHIIFNSPTQWARFKDQVKNAPRPIEC 126 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 GLR+NP S + + +P P SRLG + + ++ ++GL FH +CE S Sbjct: 127 GLRLNPLYSEVEPPIYNPCIPGSRLGIPPSELSQEALEGIDGLHFHTHCEQNS-DALERT 185 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAI 237 L++ E+ FG + +++W++ GGG H T DY V Q ++EF ++++ +YLEPGEA+ Sbjct: 186 LEHFERHFGELLGRMKWVNFGGGHHITRADYDVDRLIQIIQEFRKRHNNIPVYLEPGEAV 245 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVC 293 + L V+D+ N + I+D S AH+PD L + + Y+ + Sbjct: 246 GWQSGFLLGEVVDVVRNGMEIAILDISAAAHMPDCLEMPYRPMVRGSAEAGEKRYSYRLG 305 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G +CLAGD+ G++ F+ P+K+GD++ FED+ Y I + N FNG+ +P+I V G + Sbjct: 306 GPTCLAGDVIGDYSFDSPLKVGDQLIFEDMIHYTIVKNNTFNGVPLPSIGVIRESGEFEL 365 Query: 354 IREFSYNDYYNNLS 367 E+ Y++Y S Sbjct: 366 WHEYGYDEYKRRNS 379 >gi|254444830|ref|ZP_05058306.1| carboxynorspermidine decarboxylase [Verrucomicrobiae bacterium DG1235] gi|198259138|gb|EDY83446.1| carboxynorspermidine decarboxylase [Verrucomicrobiae bacterium DG1235] Length = 387 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 126/373 (33%), Positives = 197/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D +L +N++ I++ G K+L ALK FA +F + Y+ G +S +E Sbjct: 16 PSPAYVVDLARLRSNMEIIQSIQEQTGAKILAALKGFAMHSVFPLMRDYVAGVCASGPWE 75 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120 LG E+FG E H + A+ ++ VL+ I FN+++Q ++ + + + GL Sbjct: 76 AQLGAEEFGKEVHCFAPAFTAVDMQEVLTYAHHISFNSLAQFHQHQPAVAESKRTVSCGL 135 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + + +P SRLG + ++ V GL FH CE S L+ Sbjct: 136 RVNPEYSEVETDIYNPCVAGSRLGIRRPALAGQDLSEVEGLHFHTMCEQNS-DTLERTLE 194 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 + E +FG + Q++W++ GGG H T Y ++ + LK F +Y ++YLEPGEA+ Sbjct: 195 HFEAKFGDLLPQMKWVNFGGGHHITSPTYDLERLVRVLKAFKSRYPHLEVYLEPGEAMAI 254 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGR 295 NT L TVLDI + + ++D S H+PD L I +T + G Sbjct: 255 NTGVLVATVLDIIDEAPPIAVLDLSATCHMPDVLEMPYRPEIVDAAEAGVKAHTYSLGGL 314 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354 SCLAGD+ G + F++P++ GD+I F D+A Y + + + FNGI P IA N D + + Sbjct: 315 SCLAGDMIGHYSFDQPLQPGDKIYFLDMAHYTMVKTSTFNGIKHPAIATWNPDTKDLTIV 374 Query: 355 REFSYNDYYNNLS 367 REF Y DY N LS Sbjct: 375 REFGYEDYRNRLS 387 >gi|121602791|ref|YP_988368.1| carboxynorspermidine decarboxylase [Bartonella bacilliformis KC583] gi|120614968|gb|ABM45569.1| carboxynorspermidine decarboxylase [Bartonella bacilliformis KC583] Length = 365 Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats. Identities = 209/367 (56%), Positives = 265/367 (72%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDK KL+ N++ +R+ +GVK LLALKCFA W +FD +++YMDGTTSSSL Sbjct: 1 MIKTPYYLIDKSKLIKNMEIIARLREMSGVKTLLALKCFATWSLFDLMSEYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID D IIFN++ QL +F D GL Sbjct: 61 YELRLGKEKFGKETHAYSVAWADHEIDEACGYADKIIFNSIQQLLRFSDA--TQMIPKGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LA+P+RPFSRLGE ++ IE + +NGLM HNNCEN F F ML Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGESDQNSIEEVLPLINGLMIHNNCENADFHLFEQMLN 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E++F ++WISLGGGIHFT ++YP+K F + LK FS+ Y V ++LEPGEA +T Sbjct: 179 FMEEKFKKLFFAVDWISLGGGIHFTAENYPLKTFAELLKRFSQTYGVTVFLEPGEAAITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL +VLD N KNL IVDSS+EAH+ D L+Y+E+A + PN GPY M+CG+SCLAG Sbjct: 239 STTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIYRENAKLEPNQGPYEVMICGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG FHF P KIGDR+SF+D AGY + +KNWFNGI MP I +K DGT+ R+F+YN Sbjct: 299 DIFGTFHFPHPPKIGDRLSFQDAAGYTMVKKNWFNGIAMPAIVIKECDGTLTLQRQFNYN 358 Query: 361 DYYNNLS 367 DY +LS Sbjct: 359 DYQESLS 365 >gi|294675763|ref|YP_003576378.1| carboxynorspermidine decarboxylase [Rhodobacter capsulatus SB 1003] gi|294474583|gb|ADE83971.1| carboxynorspermidine decarboxylase [Rhodobacter capsulatus SB 1003] Length = 364 Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats. Identities = 197/367 (53%), Positives = 255/367 (69%), Gaps = 3/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI TP+YLID+ LL NL +R+ +G K LLALKCFA W FD + +MDGTTSSSL Sbjct: 1 MIPTPFYLIDETALLQNLQKIDLLREASGAKALLALKCFATWSAFDIMRPHMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID + D IIFN+V QL +F + + G+ Sbjct: 61 YELRLGREKFGKETHAYSVAWSDREIDEACAYADKIIFNSVGQLTRFAE--PSQGIQRGV 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S S F LADP RPFSRLGE K+ ++G+M H NCEN+ F F L Sbjct: 119 RLNPRFSTSGFDLADPARPFSRLGEWDVTKLLGVADLISGVMIHYNCENRDFALFDDQLG 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE+EF + +++W+SLGGGIHFT + YP+++ +RLK FS+++ VQ+YLEPGEA +T Sbjct: 179 RIEREFAPLLEKLDWVSLGGGIHFTGEGYPLEELAKRLKTFSDRFGVQVYLEPGEASITK 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL TVLD+ +N K L IVDSS+EAH+ D L+Y+ESA P G + +CG+SCLAG Sbjct: 239 STTLEVTVLDLLDNGKQLAIVDSSIEAHMLDLLIYRESAK-LPQEGDHAYQICGKSCLAG 297 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE F P+K+GDRIS D AGY + +KNWFNG+NMP+IA+K G I IREF+Y Sbjct: 298 DIFGEARFPAPLKVGDRISVADAAGYTMVKKNWFNGVNMPSIAIKRASGQIDLIREFTYE 357 Query: 361 DYYNNLS 367 DY ++LS Sbjct: 358 DYLSSLS 364 >gi|149194966|ref|ZP_01872059.1| Carboxynorspermidine decarboxylase [Caminibacter mediatlanticus TB-2] gi|149134887|gb|EDM23370.1| Carboxynorspermidine decarboxylase [Caminibacter mediatlanticus TB-2] Length = 371 Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats. Identities = 147/372 (39%), Positives = 219/372 (58%), Gaps = 9/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IKTP Y+I++ KL NNL ++ AG K+L+ALK +A W FD L +Y+ G T+S L+ Sbjct: 3 IKTPAYVIEEDKLENNLKILKNVQDKAGCKILVALKGYATWSTFDLLEKYLAGATASGLW 62 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L K E H Y+ AYKD EID + T+IFN+ +QL +F+++ ++ IGLR Sbjct: 63 EAKLAQMK-PWEVHTYSPAYKDDEIDEIADISHTVIFNSFNQLERFENRVKQKAL-IGLR 120 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS + L DP P+SRLG ++ +++KNV+GL FH CE L+ Sbjct: 121 VNPGVSSAPVPLYDPCAPYSRLGITKENFKANKLKNVSGLHFHTLCEQL-DDALERTLEE 179 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVT 239 EK +G ++ +EW++ GGG H T K Y V++ + +KEF +Y +YLEPGEA+ Sbjct: 180 FEKLYGEYLKDMEWVNFGGGHHITRKGYNVENLIKMIKEFKNRYPNIKDVYLEPGEAVGL 239 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGR 295 N L VLDI +N + I+D+S EAH+PD L + YT G Sbjct: 240 NAGYLIAEVLDIVDNGMKIAILDTSAEAHMPDVLAMPYRPEVRNAGKPGEKKYTYRFGGV 299 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGD+ G++ F++ +K+GD++ FED+A Y + + FNG+ +P+I VK +G +R Sbjct: 300 TCLAGDVIGDYSFDEELKVGDKVIFEDMAIYTMVKNTAFNGVRLPSIVVKRKNGDFWKVR 359 Query: 356 EFSYNDYYNNLS 367 EF + D+ N LS Sbjct: 360 EFHFEDFKNRLS 371 >gi|160884393|ref|ZP_02065396.1| hypothetical protein BACOVA_02371 [Bacteroides ovatus ATCC 8483] gi|237718189|ref|ZP_04548670.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_2_4] gi|156110132|gb|EDO11877.1| hypothetical protein BACOVA_02371 [Bacteroides ovatus ATCC 8483] gi|229452610|gb|EEO58401.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_2_4] Length = 379 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 120/373 (32%), Positives = 195/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y+D +T+SS+YE Sbjct: 8 PSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYE 67 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++ Q +F A+ G+ Sbjct: 68 ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGSGISCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G E+ + + G H +CE+ S+ L+ Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPEALPQGIEGFHCHCHCESSSYE-LERTLE 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E +F H+ QI+W++LGGG T KDY + + L+ +Y +I LEPG A Sbjct: 187 HLEAKFAHWFPQIKWLNLGGGHLMTRKDYDTEHLIRLLQGLKARYPHLRIILEPGSAFTW 246 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L + N G Y + G Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ +G + Sbjct: 307 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 366 Query: 355 REFSYNDYYNNLS 367 ++FSY DY + +S Sbjct: 367 KQFSYEDYRDRMS 379 >gi|149204798|ref|ZP_01881761.1| putative carboxynorspermidine decarboxylase protein [Roseovarius sp. TM1035] gi|149141767|gb|EDM29820.1| putative carboxynorspermidine decarboxylase protein [Roseovarius sp. TM1035] Length = 364 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 203/367 (55%), Positives = 257/367 (70%), Gaps = 3/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI TPYYLID+ +LL N+ +R +G K LLALKCFA W F T+ YMDGTTSSSL Sbjct: 1 MIPTPYYLIDEDRLLQNMRKIERLRALSGAKALLALKCFATWSAFPTMKPYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +E+ LG EKFG ETHAY+VA+ D EI+ +S D IIFNTV QL ++ +Q + GL Sbjct: 61 FELRLGREKFGQETHAYSVAWSDAEIEEAVSYADKIIFNTVGQLQRYD--SQSAGIERGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S S F LADP RPFSRLGE +KI I ++G+M H NCEN+ F F L Sbjct: 119 RLNPRFSTSSFDLADPARPFSRLGEWEVNKILGVIDRISGVMIHYNCENRDFDLFDQQLT 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE EFG + +++W+SLGGGIHFT DYP+++ RLK+F+EK+ VQ+YLEPGEA +T Sbjct: 179 RIEDEFGPVLERLQWVSLGGGIHFTGDDYPLEELAARLKQFAEKFDVQVYLEPGEAAITG 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TVLD+ +N K+L IVDSS EAH+ D L+Y+ESA P G +T +CG+SCLAG Sbjct: 239 TTTLEVTVLDLLDNGKDLAIVDSSTEAHMLDLLIYRESAK-LPQDGAHTYQICGKSCLAG 297 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE F P+ IGDRIS D AGY + +KNWFNG+NMP IA++ DG I IR F++ Sbjct: 298 DIFGEARFAAPLSIGDRISIGDAAGYTMVKKNWFNGVNMPAIAIRRADGRIDVIRSFTFE 357 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 358 DFAASLS 364 >gi|332710990|ref|ZP_08430926.1| carboxynorspermidine decarboxylase [Lyngbya majuscula 3L] gi|332350304|gb|EGJ29908.1| carboxynorspermidine decarboxylase [Lyngbya majuscula 3L] Length = 379 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 142/374 (37%), Positives = 210/374 (56%), Gaps = 9/374 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+++ +KL+ NL+ ++K AG+ ++LALK FA + F + QY+ GTT+SSL+ Sbjct: 7 IPSPCYVLESEKLIENLELIDSVQKKAGITIILALKGFAMFSAFPIVKQYLQGTTASSLF 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E+FGGE H Y +AY++ E ++ I FN++SQ +FK+K GLR Sbjct: 67 EARLGREEFGGELHLYLLAYQEKEFPELIQGATHISFNSLSQWERFKEKTLLTQVSPGLR 126 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + + +P+ P SRLG + + + + + GL HN CE+ S + L+ Sbjct: 127 INPEYSPVEPEIYNPSSPLSRLGIRAEKLGDKLPEGIEGLHCHNLCESDS-QALARTLEQ 185 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 IE FGH + QI+W++LGGG T K Y ++ + L F +Y IYLEPG A+ Sbjct: 186 IETLFGHHLPQIKWLNLGGGHLITSKSYDIEHLIEVLTRFKSRYPHLHIYLEPGSAVAWE 245 Query: 241 TTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 T L TVLD I + + ++D S AH+PD L I P + G Sbjct: 246 TGVLRATVLDLIETSNLIIAMLDVSFTAHMPDCLEMPYKPRIRGARDPQQKEPRYRMGGL 305 Query: 296 SCLAGDI--FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 +CLAGD G+++FE P+++GD I FED+ Y + + + FNGI P I + DGT Sbjct: 306 TCLAGDFMGMGDYYFETPLQVGDTIVFEDMIHYTMVKTSMFNGIKHPAIGIVRSDGTFNL 365 Query: 354 IREFSYNDYYNNLS 367 +REF Y DY + LS Sbjct: 366 VREFGYEDYKSRLS 379 >gi|332668239|ref|YP_004451027.1| carboxynorspermidine decarboxylase [Haliscomenobacter hydrossis DSM 1100] gi|332337053|gb|AEE54154.1| carboxynorspermidine decarboxylase [Haliscomenobacter hydrossis DSM 1100] Length = 379 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 122/374 (32%), Positives = 205/374 (54%), Gaps = 9/374 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++D+ +L NL+ ++++ +G ++LALK F+ W +F + QY+ G T+SSL+ Sbjct: 7 VPSPAYVLDEARLRRNLELIQHVQQESGASVILALKGFSMWRVFPMVKQYLAGATASSLH 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119 E L E+ G H Y+ AY + + V+ I FN+++Q +++++ Q+ + G Sbjct: 67 EARLIFEEMGVPAHTYSPAYLPAQFEEVMGYSSHITFNSIAQYARYREQLQQAKQSISPG 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LR+NP S + L +P+ P SRLGE ++ + + GL H CE+ S ++ Sbjct: 127 LRVNPEFSVVETDLYNPSAPGSRLGEMVENLGGKLPEGIEGLHIHTLCES-SAEDLENLI 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 K++E+ FG F Q++WI+ GGG T + Y V+ + L+ F ++ ++ LEPG AI Sbjct: 186 KSVEQRFGAFFPQLQWINFGGGHLMTRQGYDVERLIKVLQAFRARHPQLEVILEPGSAIA 245 Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY----PNTGPYTAMVC 293 T L TTVLD+ + + D S AH+PD L + P G T + Sbjct: 246 WETGELVTTVLDVINSRGIKTAILDVSFTAHMPDTLEMPYRPKVLGATDPVDGKPTYRLG 305 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G SCLAGD E+ FE+ +K GDR+ D+ Y + + FNG+ P I + + D T++ Sbjct: 306 GSSCLAGDFMTEYSFEQELKPGDRLVLWDMIHYTMVKTTTFNGVKHPDICIWHEDDTLEV 365 Query: 354 IREFSYNDYYNNLS 367 ++++ Y D+ N LS Sbjct: 366 VKKYEYEDFRNRLS 379 >gi|295083988|emb|CBK65511.1| carboxynorspermidine decarboxylase [Bacteroides xylanisolvens XB1A] Length = 379 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 117/373 (31%), Positives = 192/373 (51%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y+D +T+SS+YE Sbjct: 8 PSPCYIMEEELLRKNLCLIKNVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYE 67 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++ Q +F A+ G+ Sbjct: 68 ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGSGISCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G ++ + + G H +CE+ S+ L+ Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPDALPQGIEGFHCHCHCESSSYE-LERTLE 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E +F + QI+W++LGGG T K Y + L+ ++ +I LEPG A Sbjct: 187 HLEAKFSRWFPQIKWLNLGGGHLMTRKGYDTEHLITLLQGLKARHPHLRIILEPGSAFTW 246 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L + N G Y + G Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ P++IG+RI FED+ Y + + N FNGI+ P IA+ +G + Sbjct: 307 NSCLSGDYMGLWSFDHPLQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 366 Query: 355 REFSYNDYYNNLS 367 ++FSY DY +S Sbjct: 367 KQFSYEDYRGRMS 379 >gi|315121904|ref|YP_004062393.1| carboxynorspermidine decarboxylase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495306|gb|ADR51905.1| carboxynorspermidine decarboxylase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 367 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 299/367 (81%), Positives = 334/367 (91%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MIKTPYYLIDKQK+LNNL+ I+KNAG+KLLLALKCF+AWG+FD L+QYMDGTTSSSL Sbjct: 1 MIKTPYYLIDKQKILNNLEIVQRIQKNAGIKLLLALKCFSAWGVFDILSQYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YEVMLG +KFGGETHAYNVAYKDCEID VL++CDTIIFN +SQLNKFK+KAQK K IGL Sbjct: 61 YEVMLGRKKFGGETHAYNVAYKDCEIDVVLAHCDTIIFNNISQLNKFKEKAQKSKKNIGL 120 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 RINPS+SYS FILADPNRPFSRLGEK K+KI EIKN+NGLMFHNNCENKSF CF AML Sbjct: 121 RINPSISYSNFILADPNRPFSRLGEKDKNKIADEIKNINGLMFHNNCENKSFPCFDAMLN 180 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE+EFG+FI Q+EWISLGGGIHFTD YP++DFC+RLKEFSEKYS+QIYLEPGEAIVTN Sbjct: 181 HIEQEFGNFIFQVEWISLGGGIHFTDNTYPIEDFCRRLKEFSEKYSIQIYLEPGEAIVTN 240 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TTTL TTVLDI++NIKNLVIVDSSVEAH+PD LLY++SA I PN GPYTAMVCGRSCLAG Sbjct: 241 TTTLETTVLDIAQNIKNLVIVDSSVEAHLPDCLLYKQSAIISPNKGPYTAMVCGRSCLAG 300 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG+FHFE P +IGDRISFEDVAGYN+NRKNWFNGINMP I K++DGT+K IREFSY+ Sbjct: 301 DIFGDFHFETPPQIGDRISFEDVAGYNLNRKNWFNGINMPMIVAKDLDGTLKIIREFSYD 360 Query: 361 DYYNNLS 367 DYY NLS Sbjct: 361 DYYKNLS 367 >gi|326565772|gb|EGE15934.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis BC1] Length = 400 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 185/382 (48%), Positives = 249/382 (65%), Gaps = 16/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TPYYL+D++ +++NL + +GVK LLALKCFA WG+F+++ Y+ GTTSSSL Sbjct: 19 IQTPYYLLDERAIIDNLSITQKVCHESGVKALLALKCFATWGVFESMKPYLHGTTSSSLK 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG E FGGETHAY+VAY D EI VL CD IIFN+++QL +F A + +GLR Sbjct: 79 EVRLGKEYFGGETHAYSVAYADHEIKEVLDYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S S FI+ADP RPFSRLGE + I + + G+M HNNCEN F FS L + Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG ++EWIS GGGIH+ D++YP+ F RLK FSE Y VQIYLEPGEA V Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286 L T+VLD+ N K L +VD+S+EAH+ D L+Y++S+ + Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETTYDITGADFDGTSA 318 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + + G+SCLAGDIFG++ +P+KIGD+++F + A Y + +KNWFNG++MP+I + Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 DG I R+F Y DY +LS Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400 >gi|260174601|ref|ZP_05761013.1| carboxynorspermidine decarboxylase [Bacteroides sp. D2] gi|315922865|ref|ZP_07919105.1| carboxynorspermidine decarboxylase [Bacteroides sp. D2] gi|313696740|gb|EFS33575.1| carboxynorspermidine decarboxylase [Bacteroides sp. D2] Length = 379 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 120/373 (32%), Positives = 195/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y+D +T+SS+YE Sbjct: 8 PSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYE 67 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++ Q +F A+ G+ Sbjct: 68 ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGSGISCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G E+ + + G H +CE+ S+ L+ Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITTDLLPEALPQGIEGFHCHCHCESSSYE-LERTLE 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E +F H+ QI+W++LGGG T KDY + + L+ +Y +I LEPG A Sbjct: 187 HLEAKFAHWFPQIKWLNLGGGHLMTRKDYDTEHLIRLLQGLKARYPHLRIILEPGSAFTW 246 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L + N G Y + G Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ +G + Sbjct: 307 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 366 Query: 355 REFSYNDYYNNLS 367 ++FSY DY + +S Sbjct: 367 KQFSYEDYRDRMS 379 >gi|163745757|ref|ZP_02153117.1| carboxynorspermidine decarboxylase [Oceanibulbus indolifex HEL-45] gi|161382575|gb|EDQ06984.1| carboxynorspermidine decarboxylase [Oceanibulbus indolifex HEL-45] Length = 364 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 209/366 (57%), Positives = 266/366 (72%), Gaps = 2/366 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPYYLIDK L +N++ +R +G + LLALKCFA W +FD +++YMDG+TSSSLY Sbjct: 1 MQTPYYLIDKANLRDNMEKIARLRALSGARCLLALKCFATWSVFDFMSEYMDGSTSSSLY 60 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG EKF GETHAY+VAY D EID VL + D IIFN++ QL+KF Q GLR Sbjct: 61 EVRLGAEKFPGETHAYSVAYADHEIDEVLGHADKIIFNSIGQLDKFDT--QSSGHIRGLR 118 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 NP VS S+F LADP RPFSRLGE ++I++ ++GLMFHNNCEN SF F ML Sbjct: 119 ANPGVSTSEFDLADPARPFSRLGEHDPEEIDAVADRISGLMFHNNCENDSFERFDEMLTL 178 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG + +++WISLGGGIHFT DYP+ D RLK F+E + VQ+YLEPGEA +T Sbjct: 179 IEDRFGAVLHKMDWISLGGGIHFTGADYPLDDLALRLKAFAEAFGVQVYLEPGEAAITGA 238 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 TL TVLD N KNL IVDSS+EAH+ D L+Y+E A I PNTG + M+CG+SCLAGD Sbjct: 239 ATLEVTVLDTMHNGKNLAIVDSSIEAHMLDLLIYREPAKIAPNTGDHEWMICGKSCLAGD 298 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 IFGEF F+ P+K GDR+SF+D AGY + +KNWFNG+ MP+IA++ +DGT + +R+F Y+D Sbjct: 299 IFGEFRFDAPLKAGDRLSFQDAAGYTMVKKNWFNGVKMPSIAIRELDGTTRMVRDFDYDD 358 Query: 362 YYNNLS 367 + LS Sbjct: 359 FAAALS 364 >gi|149198544|ref|ZP_01875588.1| hypothetical protein LNTAR_18515 [Lentisphaera araneosa HTCC2155] gi|149138259|gb|EDM26668.1| hypothetical protein LNTAR_18515 [Lentisphaera araneosa HTCC2155] Length = 389 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 130/369 (35%), Positives = 206/369 (55%), Gaps = 8/369 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 ++P Y+ID+Q L NL+ I+ K+LLALK F+ + F + +Y+DG +SSL+E Sbjct: 24 ESPAYIIDEQALERNLEILKEIKDKTDCKILLALKAFSNYKTFPLIKKYLDGCCASSLWE 83 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 L +E+FG E H Y+ +Y+ E++ + S + IIFN+V +L ++ KA ++GLRI Sbjct: 84 AQLAYEEFGKEVHTYSPSYRSDELNQISSYSNHIIFNSVQELKRY--KASLKGTELGLRI 141 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S + L +P FSRLG K D +I ++G H C+ K L Sbjct: 142 NPEHSETDVELYNPCSKFSRLGAKLADLEGLDIDAISGFHLHTLCQ-KGADALERTLAVF 200 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 E++F F+ +++W++LGGG H T Y + + + KY +Q+YLEPGEA+ NT Sbjct: 201 EEKFHKFLPKLKWLNLGGGHHITQVGYDKDLLMRLINKLKTKYDLQVYLEPGEAVAINTG 260 Query: 243 TLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRSC 297 +L TVLD E+ + IVD S H+PD L I ++ + G SC Sbjct: 261 SLLCTVLDTFESAGIHHAIVDISATCHMPDVLEMPYRPDIRGAGEEGQKKFSYRLGGTSC 320 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 LAGD G + FE+ +K GDR+ F+D++ Y + + ++FNG+ P+I +K+ +++F Sbjct: 321 LAGDSIGIYSFEEELKRGDRLLFDDMSHYTMVKTSFFNGVRHPSIYLKDKSRRDVLLKKF 380 Query: 358 SYNDYYNNL 366 +Y DY + L Sbjct: 381 TYEDYRSKL 389 >gi|46578835|ref|YP_009643.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|46448247|gb|AAS94902.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|311232698|gb|ADP85552.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris RCH1] Length = 390 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 122/376 (32%), Positives = 209/376 (55%), Gaps = 12/376 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY----MDGTTSS 58 +P ++ID+ +L+ N +++ G ++LLALK FAAW F L++ + GT +S Sbjct: 16 PSPCFVIDEDRLVANAAILDEVQRRTGARVLLALKGFAAWSTFPLLSRAQGGVLHGTCAS 75 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116 S +E LG E FGGE HA+ Y + ++ +++ D I+FN+ +Q +++ A H Sbjct: 76 SPHEARLGRETFGGEVHAFAAGYSEDDMAELVTIADHIVFNSFAQWRRYRPVVEASGRHI 135 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + G+R+NP S + +P P SRLG + + ++ + GL FH CE S Sbjct: 136 ECGIRVNPEHSEGAVAIYNPCSPGSRLGVRERHFEPQSLEGITGLHFHTLCEQD-AGALS 194 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 L E +FG ++ + W++ GGG H T + Y + C+ ++ ++Y VQ+Y+EPGEA Sbjct: 195 RTLDAFESKFGRYLEGMRWVNFGGGHHITREGYDLDLLCRCIERIRDRYGVQVYIEPGEA 254 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMV 292 + + L +VLD+ + +VI+D+S AH+PD L P+ +T + Sbjct: 255 VALDAGVLLCSVLDVVQADVPVVILDTSAAAHMPDVLEMPYRPGCIGSGLPDEKAWTCRL 314 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTI 351 G+SCLAGD+ G++ F++P++ GDR++F D+A Y++ + FNG+ +P IA+ G Sbjct: 315 AGKSCLAGDVVGDYSFDRPLRPGDRLAFLDMAIYSMVKTTTFNGLQLPAIALYRASSGKR 374 Query: 352 KAIREFSYNDYYNNLS 367 + +R F Y + + LS Sbjct: 375 EVVRTFGYETFRDRLS 390 >gi|225377633|ref|ZP_03754854.1| hypothetical protein ROSEINA2194_03284 [Roseburia inulinivorans DSM 16841] gi|225210497|gb|EEG92851.1| hypothetical protein ROSEINA2194_03284 [Roseburia inulinivorans DSM 16841] Length = 377 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 138/375 (36%), Positives = 211/375 (56%), Gaps = 12/375 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP Y+ID+++L NL + K+ G K+LLA K F+ + + + QY+ GTT+S L+ Sbjct: 6 LKTPCYVIDEKQLKKNLSILQKVEKDTGCKILLAQKAFSCFYEYPLIGQYISGTTASGLF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E+ G E H + AYK+ ++ ++ CD ++FN+ SQL K+K+ +G+R Sbjct: 66 EARLGKEEMGKENHVFAPAYKEEDVKELVKICDHMVFNSFSQLEKYKNFC--KETSVGIR 123 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKC----KDKIESEIKNVNGLMFHNNCENKSFLCFS 176 INP S + DP SRLG + + V+GL FH CE + + Sbjct: 124 INPECSTQGDHAIYDPCAKGSRLGVTIAHFKEQFTDEMYDYVDGLHFHTLCEQNADD-LA 182 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 L+ +E++FG ++ +++W++ GGG H T DY + + + EKY + IYLEPGEA Sbjct: 183 KTLEAVEEKFGSYLYKMKWLNFGGGHHITRADYDIGLLEKCILHMKEKYDLDIYLEPGEA 242 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMV 292 I N L TTV+D+ +N +I+D+S H+PD L + P YT + Sbjct: 243 IALNAGYLATTVMDVVDNDIQTLILDASAACHMPDVLEMPYRPPLRSSGMPEEKKYTYRL 302 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 +CLAGDI G++ F++ K+ DR+ FED+A Y++ + N FNGI +P IAV + G K Sbjct: 303 SSYTCLAGDIIGDYSFDEEKKVDDRLYFEDMAIYSMVKNNTFNGIPLPDIAVMDESGECK 362 Query: 353 AIREFSYNDYYNNLS 367 IR FSY D+ LS Sbjct: 363 VIRSFSYEDFKGRLS 377 >gi|332305132|ref|YP_004432983.1| carboxynorspermidine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172461|gb|AEE21715.1| carboxynorspermidine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 379 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 127/371 (34%), Positives = 202/371 (54%), Gaps = 6/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+ ++ KL NL +++ +GV+++LALK F+ W FD + QY+ G+T+S+++ Sbjct: 10 IPSPCYVCEEAKLEANLQLMQRVQQESGVEIILALKGFSMWSTFDLVKQYLQGSTASAVW 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E+ G + HA++ AYK +ID ++ D I FN+ Q N++K + + G+R Sbjct: 70 EARLGKEEIGKQVHAFSPAYKPADIDQLVDLVDHISFNSFGQWNRYKSQILASNVSPGIR 129 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +N ++ L DP+ P SR G KD ++++ + G HN CE SF +L Sbjct: 130 LNAQHREAETELYDPSAPGSRFGILAKDLKDADLSGLEGFHIHNLCECDSFATERTILAV 189 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 E +FG + QI+WI+ GGG T + Y V+ L+ F ++ + LEPG A+ Sbjct: 190 EE-KFGQYFGQIKWINFGGGHLMTKEGYDVEHLITTLRAFKARHPHLNVILEPGSAVAWQ 248 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 T L V+DI EN + IVD S AH+PD L + N +T G S Sbjct: 249 TGPLICEVIDIVENRDKIAIVDMSATAHMPDVLEMPYRPEVRGAGKANEKAFTYRFGGNS 308 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL GD + F+ ++IG+RI FED+ Y + + +FNG+ P+I + +G + +R+ Sbjct: 309 CLTGDAIDLYSFDHELQIGERIIFEDMIHYTMVKTTFFNGVEHPSIGILRKNGEFELVRK 368 Query: 357 FSYNDYYNNLS 367 F Y D+ N LS Sbjct: 369 FEYEDFKNKLS 379 >gi|120603558|ref|YP_967958.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris DP4] gi|120563787|gb|ABM29531.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris DP4] Length = 390 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 121/376 (32%), Positives = 208/376 (55%), Gaps = 12/376 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY----MDGTTSS 58 +P ++ID+ +L+ N +++ G ++LLALK FAAW F L++ + GT +S Sbjct: 16 PSPCFVIDEDRLVANAAILDEVQRRTGARVLLALKGFAAWSTFPLLSRAQGGVLHGTCAS 75 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116 S +E LG E FGGE HA+ Y + ++ +++ D I+FN+ +Q +++ A H Sbjct: 76 SPHEARLGRETFGGEVHAFAAGYSEDDMAELVTIADHIVFNSFAQWRRYRPVVEASGRHI 135 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + G+R+NP S + +P P SRLG + + ++ + GL FH CE Sbjct: 136 ECGIRVNPEHSEGAVAIYNPCSPGSRLGVRERHFEAESLEGITGLHFHTLCEQD-AGALE 194 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 L E +FG ++ + W++ GGG H T + Y + C+ ++ ++Y VQ+Y+EPGEA Sbjct: 195 RTLDAFESKFGRYLEGMRWVNFGGGHHITREGYDLDLLCRCIERIRDRYGVQVYIEPGEA 254 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMV 292 + + L +VLD+ + +VI+D+S AH+PD L P+ +T + Sbjct: 255 VALDAGVLLCSVLDVVQADVPVVILDTSAAAHMPDVLEMPYRPGCIGSGLPDEKAWTCRL 314 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTI 351 G+SCLAGD+ G++ F++P++ GDR++F D+A Y++ + FNG+ +P IA+ G Sbjct: 315 AGKSCLAGDVVGDYSFDRPLRPGDRLAFLDMAIYSMVKTTTFNGLQLPAIALYRASSGKR 374 Query: 352 KAIREFSYNDYYNNLS 367 + +R F Y + + LS Sbjct: 375 EVVRTFGYETFRDRLS 390 >gi|332991869|gb|AEF01924.1| carboxynorspermidine decarboxylase [Alteromonas sp. SN2] Length = 376 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 128/371 (34%), Positives = 202/371 (54%), Gaps = 9/371 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+++++KL+ NL+ ++ +GV+++LALK F+ W FD + Y+ G T+SS++ Sbjct: 10 IPSPCYVLEEEKLIRNLELMKRVQDESGVRIILALKGFSMWSSFDIIKPYLHGATASSVW 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L + G E HAY+ AYK +I+ + + + + FN++SQ K +GLR Sbjct: 70 EAKLA-AEMGKEVHAYSPAYKKADIEELATLVNHLSFNSLSQWQ--THKDALAGVSLGLR 126 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP + L DP P SRLG + + + ++G HN CE SF LK Sbjct: 127 INPEHQEADTPLYDPAAPGSRLGLRVSELEGVGLSGIDGFHCHNLCECDSFATERT-LKA 185 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 IE FG ++ Q++W++LGGG T + Y V + L +F ++Y + LEPG A+ Sbjct: 186 IEARFGDYLGQLKWLNLGGGHLMTSEGYDVDHLIKTLSDFKQRYPHLDVILEPGSAVAWQ 245 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296 T L V+D+ N ++ I+D S AH+PD L TI Y + G S Sbjct: 246 TGPLIAEVVDVVNNDGDIAILDISATAHMPDVLEMPYRPTILNAALPGEKAYDYRLGGNS 305 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ + F+ P+K GDR+ FED+ Y + + ++FNG+ P I + +G + +R+ Sbjct: 306 CLAGDVIDTYSFDAPLKAGDRVQFEDMMHYTMVKTSFFNGVEHPAIGILRKNGEFEIVRQ 365 Query: 357 FSYNDYYNNLS 367 FSY D+ LS Sbjct: 366 FSYEDFKGRLS 376 >gi|326565412|gb|EGE15589.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 103P14B1] gi|326573400|gb|EGE23368.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 101P30B1] Length = 400 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 185/382 (48%), Positives = 249/382 (65%), Gaps = 16/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TPYYL+D++ +++NL + +GVK LLALKCFA WG+F+++ Y+ GTTSSSL Sbjct: 19 IQTPYYLLDERAIIDNLSITQKVCHESGVKALLALKCFATWGVFESMKPYLHGTTSSSLK 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG E FGGETHAY+VAY D EI VL CD IIFN+++QL +F A + +GLR Sbjct: 79 EVRLGKECFGGETHAYSVAYADHEIKEVLDYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S S FI+ADP RPFSRLGE + I + + G+M HNNCEN F FS L + Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG ++EWIS GGGIH+ D++YP+ F RLK FSE Y VQIYLEPGEA V Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT---------------- 285 L T+VLD+ N K L +VD+S+EAH+ D L+Y++S+ + Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNDTAYDITGADFDGTSA 318 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + + G+SCLAGDIFG++ +P+KIGD+++F + A Y + +KNWFNG++MP+I + Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 DG I R+F Y DY +LS Sbjct: 379 RQDGKIMIQRQFDYEDYKASLS 400 >gi|78355620|ref|YP_387069.1| carboxynorspermidine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218025|gb|ABB37374.1| carboxynorspermidine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 391 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 125/379 (32%), Positives = 202/379 (53%), Gaps = 14/379 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ L NL +++ G ++LLALK FA + +F L + G +SS + Sbjct: 14 VPSPCFVVDEGLLSRNLAVLDTVQQRTGARILLALKGFAMFSVFPLLRTVLHGACASSPH 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E L E+FG E H + AY D ++ +L + D ++FN+ +QL +F+ A H +G Sbjct: 74 EARLAREEFGREVHVFAAAYSDDDMQDILRHADHVVFNSFAQLERFRPAVQACPRHVSMG 133 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFL 173 +R+NP S + DP SRLG + ++ + + V GL FH C++ Sbjct: 134 IRVNPEHSEGAVPIYDPCSDGSRLGVRLREFEAALERDSGALDGVEGLHFHTLCQHN-AD 192 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 L +EK+FG ++ ++W+++GGG H T DY V C+ Y VQ+YLEP Sbjct: 193 ALERTLAEVEKKFGRWMHGMQWVNMGGGHHITRSDYDVDTLCRCAAHVRRTYGVQVYLEP 252 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYT 289 GEA+ +T L TVLD+ + + I+D+S H+PD L + Y+ Sbjct: 253 GEAVALDTGILVATVLDVVQADMPVAILDASAACHMPDVLEMPYRPHVIGSGLQGEKAYS 312 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 G+SCLAGD+ GE+ F++P++ GDR++F D+A Y++ + N FNG+ +P IA Sbjct: 313 YRFAGKSCLAGDVIGEYSFDEPLRAGDRVAFTDMAIYSMVKTNTFNGLQLPAIARYRPAT 372 Query: 350 TIKAI-REFSYNDYYNNLS 367 + R F Y D+ N LS Sbjct: 373 DEILVERTFGYEDFRNRLS 391 >gi|293373794|ref|ZP_06620138.1| carboxynorspermidine decarboxylase [Bacteroides ovatus SD CMC 3f] gi|292631193|gb|EFF49827.1| carboxynorspermidine decarboxylase [Bacteroides ovatus SD CMC 3f] Length = 379 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 118/373 (31%), Positives = 194/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y++ +T+SS+YE Sbjct: 8 PSPCYIMEEELLRKNLSLIKSVADRAGVEIILAFKSFAMWRSFPIFREYINHSTASSVYE 67 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++ Q +F A+ G+ Sbjct: 68 ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGSGISCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G + + + G H +CE+ S+ L+ Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPDVLPQGIEGFHCHCHCESSSYE-LERTLE 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E +F H+ QI+W++LGGG T KDY + + L+ +Y +I LEPG A Sbjct: 187 HLEAKFAHWFPQIKWLNLGGGHLMTRKDYDTEHLIRLLQGLKARYPHLRIILEPGSAFTW 246 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L + N G Y + G Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ +G + Sbjct: 307 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 366 Query: 355 REFSYNDYYNNLS 367 ++FSY DY + +S Sbjct: 367 KQFSYEDYRDRMS 379 >gi|152993160|ref|YP_001358881.1| carboxynorspermidine decarboxylase [Sulfurovum sp. NBC37-1] gi|151425021|dbj|BAF72524.1| carboxynorspermidine decarboxylase [Sulfurovum sp. NBC37-1] Length = 379 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 144/372 (38%), Positives = 223/372 (59%), Gaps = 7/372 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P +L+ ++KL+NNL+ I++ +G K+LLALK +A W F + QY+DG +S L+ Sbjct: 9 IPSPCWLLKEKKLVNNLELLQSIKEKSGAKILLALKGYALWKSFPLIRQYLDGCCASGLH 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIG 119 E ML E+FG E H Y A+K+ EID + S ++FN+ +Q +F +A+ +G Sbjct: 69 EAMLAQEEFGKEVHTYAPAFKEKEIDKIASLSQHLVFNSPAQFKRFAAQARETNPSLSLG 128 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRINP S S + +P +SRLG ++ ES ++ +GL FH CE S +L Sbjct: 129 LRINPEYSESPKEIYNPCGLYSRLGTTKENFDESIVEICDGLHFHALCEQDS-SSLEKVL 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 ++ E FG +I +++WI+ GGG H T K Y ++ +++F +Y V++YLEPGEA+ Sbjct: 188 QHFETNFGAYIPKMKWINFGGGHHITRKGYDIERLVTLIRDFKARYDVEVYLEPGEAVAW 247 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 T L TVLDI N ++ I+D+S E H+PD ++ A + +T + G Sbjct: 248 ETGPLIATVLDIVHNGIDIAILDTSAETHMPDTIIMPYRAEVRGAGKVGEKKHTYRLAGN 307 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGDI G++ F+ P+KIGDR+ FED Y + + FNGI +P IA++ +DG I+ +R Sbjct: 308 TCLAGDIMGDYSFDAPLKIGDRVFFEDQMHYTMVKATTFNGIKLPAIAIERLDGEIEVVR 367 Query: 356 EFSYNDYYNNLS 367 EF Y D+ + LS Sbjct: 368 EFGYGDFKSRLS 379 >gi|53713816|ref|YP_099808.1| carboxynorspermidine decarboxylase [Bacteroides fragilis YCH46] gi|52216681|dbj|BAD49274.1| carboxynorspermidine decarboxylase [Bacteroides fragilis YCH46] Length = 379 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 119/373 (31%), Positives = 196/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + +AGV+++LA K FA W F +Y+ +T+SS+YE Sbjct: 8 PSPCYIMEEELLRKNLSLIKSVADDAGVEIILAFKSFAMWRSFPIFREYIGHSTASSVYE 67 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++SQ ++F A+ G+ Sbjct: 68 ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFSRFYPLTVAEGSGISCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G + + G H +CE+ SF L+ Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPARLPQGIEGFHCHCHCESSSFE-LERTLQ 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E++F + +QI+W++LGGG T KDY + L+ ++Y +I LEPG A Sbjct: 187 HLEEKFSPWFSQIKWLNLGGGHLMTRKDYDTRHLTGLLQGLKKRYPHLRIILEPGSAFTW 246 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L ++ GP+ + G Sbjct: 247 QTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPSVRGAVMGEEGPFVYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++ G+RI FED+ Y + + N FNGI+ P IA+ DG + Sbjct: 307 NSCLSGDYMGSWSFDHELQAGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTADGKAEIF 366 Query: 355 REFSYNDYYNNLS 367 R+FSY DY + +S Sbjct: 367 RQFSYEDYRDRMS 379 >gi|224367263|ref|YP_002601426.1| NspC [Desulfobacterium autotrophicum HRM2] gi|223689979|gb|ACN13262.1| NspC [Desulfobacterium autotrophicum HRM2] Length = 385 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 129/373 (34%), Positives = 201/373 (53%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP +++D L +NL +++ G ++LLALK FA + +F L + +DG +SS Sbjct: 14 VSTPGFVVDADCLRHNLSILARVKQATGCRILLALKGFAMFRVFPLLRETLDGVCASSPD 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E LG E+F E H + A+ D +D +L+ D I+FN+ Q +FK + A G Sbjct: 74 EARLGREEFCREVHTFAAAFSDEHMDELLTLSDHIVFNSFGQWKRFKARVQAAGRAISCG 133 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S L DP P SRLG + + +E+ ++GL FH CE + Sbjct: 134 IRVNPEHSEGTIPLYDPCAPGSRLGVRRANFEAAELAGISGLHFHTLCEQD-ADALERTV 192 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 E FG F+ + W++ GGG H T Y ++ C+ ++ Y+V +YLEPGEA+ Sbjct: 193 TAFEHGFGPFLKGLAWVNFGGGHHITRPGYDLERLCRVIRRIQTDYNVTVYLEPGEAVAL 252 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295 N L +VLDI + + I+D+S AH+PD L + P +T + G Sbjct: 253 NAGVLVASVLDIINSDMPIAILDTSAAAHMPDVLEMPYRPHVTGSGEPGEKQHTYRLAGL 312 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT-IKAI 354 SCLAGD+ GE+ F+ P+KIG R+ F D+A Y++ + N FNGI +P+I++ D ++ + Sbjct: 313 SCLAGDVIGEYSFDHPLKIGSRLVFTDMAIYSMVKTNTFNGIRLPSISLYEPDTDCLERV 372 Query: 355 REFSYNDYYNNLS 367 R F Y D+ LS Sbjct: 373 RTFGYQDFKMRLS 385 >gi|253568496|ref|ZP_04845907.1| carboxynorspermidine decarboxylase [Bacteroides sp. 1_1_6] gi|251842569|gb|EES70649.1| carboxynorspermidine decarboxylase [Bacteroides sp. 1_1_6] Length = 379 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 119/373 (31%), Positives = 197/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y++ +T+SS+YE Sbjct: 8 PSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 67 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN+++Q +F A+ G+ Sbjct: 68 ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMAQFRRFYPMTVAEGSGISCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G ++ K + G H +CE+ SF L+ Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGMTADLLPDTLPKGIEGFHCHCHCESSSFE-LERTLQ 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E++F + QI+W++LGGG T KDY + + L++ +Y QI LEPG A Sbjct: 187 HLEEKFSRWFPQIKWLNLGGGHLMTRKDYDTEHLIKLLQDLKARYPHLQIILEPGSAFTW 246 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L + N G + + G Sbjct: 247 QTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGEFIYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ +G + Sbjct: 307 NSCLSGDYMGVWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTKEGKAEIY 366 Query: 355 REFSYNDYYNNLS 367 ++FSY DY + +S Sbjct: 367 KQFSYEDYRDRMS 379 >gi|60682034|ref|YP_212178.1| putative carboxynorspermidine decarboxylase [Bacteroides fragilis NCTC 9343] gi|60493468|emb|CAH08254.1| putative carboxynorspermidine decarboxylase [Bacteroides fragilis NCTC 9343] gi|301163498|emb|CBW23049.1| putative carboxynorspermidine decarboxylase [Bacteroides fragilis 638R] Length = 379 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 119/373 (31%), Positives = 195/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + +AGV+++LA K FA W F +Y+ +T+SS+YE Sbjct: 8 PSPCYIMEEELLRKNLSLIKSVADDAGVEIILAFKSFAMWRSFPIFREYIGHSTASSVYE 67 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++SQ ++F A+ G+ Sbjct: 68 ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFSRFYPLTVAEGSGISCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G + + G H +CE+ SF L+ Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPARLPQGIEGFHCHCHCESSSFE-LERTLQ 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E++F + +QI+W++LGGG T KDY + L+ ++Y +I LEPG A Sbjct: 187 HLEEKFSPWFSQIKWLNLGGGHLMTRKDYDTRHLTGLLQGLKKRYPHLRIILEPGSAFTW 246 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L + GP+ + G Sbjct: 247 QTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAVMGEEGPFVYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++ G+RI FED+ Y + + N FNGI+ P IA+ DG + Sbjct: 307 NSCLSGDYMGSWSFDHELQAGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTADGKAEIF 366 Query: 355 REFSYNDYYNNLS 367 R+FSY DY + +S Sbjct: 367 RQFSYEDYRDRMS 379 >gi|326571108|gb|EGE21132.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis BC7] Length = 400 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 184/382 (48%), Positives = 250/382 (65%), Gaps = 16/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TPYYL+D++ +++NL + +GVK LLALKCFA WG+F+++ Y+ GTTSSSL Sbjct: 19 IQTPYYLLDERAIIDNLSITQKVCHESGVKALLALKCFATWGVFESMQPYLHGTTSSSLK 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG E FGGETHAY+VAY D EI VL CD IIFN+++QL +F A + +GLR Sbjct: 79 EVRLGKEYFGGETHAYSVAYADHEIKEVLDYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S S FI+ADP RPFSRLGE + I + + G+M HNNCEN F FS L + Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG ++EWIS GGGIH+ D++YP+ F +LK+FSE Y VQIYLEPGEA V Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINKLKDFSETYGVQIYLEPGEASVHQG 258 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286 L T+VLD+ N K L +VD+S+EAH+ D L+Y++S+ + Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETAYDTTGADFDGTST 318 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + + G+SCLAGDIFG++ +P+KIGD+++F + A Y + +KNWFNG++MP+I + Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 DG I R+F Y DY +LS Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400 >gi|312137223|ref|YP_004004560.1| diaminopimelate decarboxylase [Methanothermus fervidus DSM 2088] gi|311224942|gb|ADP77798.1| diaminopimelate decarboxylase [Methanothermus fervidus DSM 2088] Length = 428 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 76/392 (19%), Positives = 127/392 (32%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID+ K+ N K K+L A K + LN G + S Sbjct: 24 DTPLYVIDENKIRENYRRIYNAFKKRYDKFKILYACKANTNIAIMKILNDEGSGIDAVSP 83 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + F E + + I +++SQL + +I Sbjct: 84 GEIYIALVAGFKPEEILFTGNNVRNDELEFAVESGVMINIDSISQLKRLSKLCNPEEVEI 143 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSF 172 RINP V S+ G KD +++ + G+ H Sbjct: 144 SFRINPLVGAGHHEHCITGGEMSKFGIAEKDAVKAYSMAKNLGFKIKGIHCHIGSGILDP 203 Query: 173 LCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DFCQRLKE 220 F + E+ + E+I +GGG K + + KE Sbjct: 204 SPFLMAVDALTKIAERVSKEVGIEFEFIDIGGGFGIPYKPEEPELNIENLAKKIIEVFKE 263 Query: 221 FSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 ++Y++ +Y+EPG IV N L T V I ++ + VD+ + + Sbjct: 264 RCDEYNLGNPWLYIEPGRYIVGNAACLLTRVNTIKKSYRKFAGVDAGFNTLIRPAMYGSY 323 Query: 278 SATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 I N + G C +GDIF ++ GD ++ D Y + + Sbjct: 324 HHIIVANKANEEPCEKIDIAGNLCESGDIFARDRELPKLEEGDILAIMDAGAYCFSMSSQ 383 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 +N P + D S D + Sbjct: 384 YNSRPRPAEVLVKDDKVSIIRERESIIDLLDK 415 >gi|298385451|ref|ZP_06995009.1| carboxynorspermidine decarboxylase [Bacteroides sp. 1_1_14] gi|298261592|gb|EFI04458.1| carboxynorspermidine decarboxylase [Bacteroides sp. 1_1_14] Length = 379 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 119/373 (31%), Positives = 197/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y++ +T+SS+YE Sbjct: 8 PSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 67 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN+++Q +F A+ G+ Sbjct: 68 ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMAQFRRFYPMTVAEGSGISCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G ++ K + G H +CE+ SF L+ Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGMTADLLPDTLPKGIEGFHCHCHCESSSFE-LERTLQ 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E++F + QI+W++LGGG T KDY + + L++ +Y QI LEPG A Sbjct: 187 HLEEKFSRWFPQIKWLNLGGGHLMTRKDYDTEHLIKLLQDLKARYPHLQIILEPGSAFTW 246 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L + N G + + G Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGEFIYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ +G + Sbjct: 307 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTKEGKAEIY 366 Query: 355 REFSYNDYYNNLS 367 ++FSY DY + +S Sbjct: 367 KQFSYEDYRDRMS 379 >gi|15602236|ref|NP_245308.1| NspC [Pasteurella multocida subsp. multocida str. Pm70] gi|12720617|gb|AAK02455.1| NspC [Pasteurella multocida subsp. multocida str. Pm70] Length = 373 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 216/370 (58%), Positives = 272/370 (73%), Gaps = 6/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPYYLIDK KLL N++ Y+R+ +G K LLALKCFA WG+FD + QYMDGTTSSSLY Sbjct: 6 LQTPYYLIDKSKLLRNMEKIAYLREKSGAKALLALKCFATWGVFDFMCQYMDGTTSSSLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG EKFGGETHAY+VAY EI V++N D IIFN++SQL +F D H GLR Sbjct: 66 EVKLGREKFGGETHAYSVAYSPEEIGEVVANADKIIFNSISQLQRFCD--HTTHLPRGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS S F+LADP RP SRLGE KI + +NG MFHNNCEN+ F F ML Sbjct: 124 VNPRVSTSSFLLADPARPHSRLGEWDVAKIRDVMPLINGFMFHNNCENEDFGKFCEMLDR 183 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE+EFG + Q++W+SLGGGIHFT ++YP++ F +RLK+FS K+ VQ+YLEPGEA +T + Sbjct: 184 IEQEFGELLHQVDWVSLGGGIHFTGENYPLEAFAERLKQFSAKFGVQVYLEPGEAAITLS 243 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRSC 297 T+L TVLDI N K L IVD++ EAH+ D L+Y+ A + P+ G Y MVCG+SC Sbjct: 244 TSLEVTVLDILNNGKELAIVDAATEAHMLDLLIYRSEAKLLPDAFQGKGDYQYMVCGKSC 303 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 LAGDIFGE+ FEKP++IGDRISF D AGY + +KNWFNG+NMP IA+K +DG I+ ++ F Sbjct: 304 LAGDIFGEYRFEKPLQIGDRISFCDAAGYTMVKKNWFNGVNMPAIAIKELDGRIRVVKTF 363 Query: 358 SYNDYYNNLS 367 Y DY +LS Sbjct: 364 GYQDYVESLS 373 >gi|299146075|ref|ZP_07039143.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_23] gi|298516566|gb|EFI40447.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_23] Length = 379 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 118/373 (31%), Positives = 193/373 (51%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y++ +T+SS+YE Sbjct: 8 PSPCYIMEEELLRKNLSLIKSVADRAGVEIILAFKSFAMWRSFPIFREYINHSTASSVYE 67 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++ Q +F A+ G+ Sbjct: 68 ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGSGISCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G + + + G H +CE+ S+ L+ Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPDVLPQGIEGFHCHCHCESSSYE-LERTLE 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY-LEPGEAIVT 239 ++E +F H+ QI+W++LGGG T KDY + + L+ +YS LEPG A Sbjct: 187 HLEAKFAHWFPQIKWLNLGGGHLMTRKDYDTEHLIRLLQGLKARYSHLRIVLEPGSAFTW 246 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L + N G Y + G Sbjct: 247 QTGVLASEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ +G + Sbjct: 307 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 366 Query: 355 REFSYNDYYNNLS 367 ++FSY DY + +S Sbjct: 367 KQFSYEDYRDRMS 379 >gi|297568101|ref|YP_003689445.1| carboxynorspermidine decarboxylase [Desulfurivibrio alkaliphilus AHT2] gi|296924016|gb|ADH84826.1| carboxynorspermidine decarboxylase [Desulfurivibrio alkaliphilus AHT2] Length = 391 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 132/380 (34%), Positives = 199/380 (52%), Gaps = 15/380 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ D KL NL +++ G K++LA K FA W +F + + G ++SSL Sbjct: 13 VPSPCYVCDTGKLAANLAALDEVQRRTGAKIILAFKGFAMWSLFPQIRAVLPGASASSLD 72 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIG 119 E L E+FGGE H Y AY++ + +L D ++FN+ SQ ++ + A + G Sbjct: 73 EARLAAEEFGGEVHVYCPAYREEDFAEMLGYADHLVFNSFSQWQQYQGQVAAHQRQISCG 132 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENKSF 172 +R+NP S + L +P +SRLG + + + GL FH CE Sbjct: 133 IRVNPEYSEVEVDLYNPCGRYSRLGVTREHFRPELLAGPEQLAPAIEGLHFHALCEQN-A 191 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 + L ++FG F+ ++W++ GGG H T DY + C+ + E ++Y VQ+YLE Sbjct: 192 DALAGTLAAFNEKFGRFVQGMKWLNFGGGHHITRADYDRELLCRLIDETQQRYGVQVYLE 251 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPY 288 PGEAI N L VLDI EN ++ I+D+S H+PD L I P P+ Sbjct: 252 PGEAIALNIGVLVARVLDIVENEISIAILDTSAATHMPDVLEMPYRPHIFGAGEPGQYPH 311 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-V 347 T + G SCLAGDI G++ F +P+ G R+ F D+A Y + + FNG+ +P+IA + Sbjct: 312 TYRLGGLSCLAGDIIGDYSFPEPLTPGQRLVFGDMAHYTMVKNTTFNGVRLPSIATYDPA 371 Query: 348 DGTIKAIREFSYNDYYNNLS 367 +K IR F Y DY N LS Sbjct: 372 TDNLKVIRRFGYEDYRNRLS 391 >gi|326560115|gb|EGE10505.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 46P47B1] gi|326577169|gb|EGE27063.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis O35E] Length = 400 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 184/382 (48%), Positives = 248/382 (64%), Gaps = 16/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TPYYL+D++ +++NL + +G K LLALKCFA WG+F+++ Y+ GTTSSSL Sbjct: 19 IQTPYYLLDERAIIDNLSITQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSSLK 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG E FGGETHAY+VAY D EI VL CD IIFN+++QL +F A + +GLR Sbjct: 79 EVRLGKECFGGETHAYSVAYADHEIKEVLGYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S S FI+ADP RPFSRLGE + I + + G+M HNNCEN F FS L + Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG ++EWIS GGGIH+ D++YP+ F RLK FSE Y VQIYLEPGEA V Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286 L T+VLD+ N K L +VD+S+EAH+ D L+Y++S+ + Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETTYDITGADFDGTSA 318 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + + G+SCLAGDIFG++ +P+KIGD+++F + A Y + +KNWFNG++MP+I + Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 DG I R+F Y DY +LS Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400 >gi|296113122|ref|YP_003627060.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis RH4] gi|295920816|gb|ADG61167.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis RH4] Length = 400 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 184/382 (48%), Positives = 248/382 (64%), Gaps = 16/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TPYYL+D++ +++NL + +G K LLALKCFA WG+F+++ Y+ GTTSSSL Sbjct: 19 IQTPYYLLDERAIIDNLSITQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSSLK 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG E FGGETHAY+VAY D EI VL CD IIFN+++QL +F A + +GLR Sbjct: 79 EVRLGKECFGGETHAYSVAYADHEIKEVLGYCDKIIFNSINQLKRFGQLADDKNIPVGLR 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S S FI+ADP RPFSRLGE + I + + G+M HNNCEN F FS L + Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG ++EWIS GGGIH+ D++YP+ F RLK FSE Y VQIYLEPGEA V Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286 L T+VLD+ N K L +VD+S+EAH+ D L+Y++S+ + Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETTYDITGADFDGTST 318 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + + G+SCLAGDIFG++ +P+KIGD+++F + A Y + +KNWFNG++MP+I + Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 DG I R+F Y DY +LS Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400 >gi|317486184|ref|ZP_07945022.1| carboxynorspermidine decarboxylase [Bilophila wadsworthia 3_1_6] gi|316922561|gb|EFV43809.1| carboxynorspermidine decarboxylase [Bilophila wadsworthia 3_1_6] Length = 406 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 124/393 (31%), Positives = 205/393 (52%), Gaps = 29/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG----TTSS 58 +P +++D+ KL +N+ +++ G K+L+ALKCFA W +F +++ +G +S Sbjct: 15 PSPGFVVDEAKLRSNVAILDEVQRRTGAKILMALKCFAMWDVFPIISRSGEGALYGCCAS 74 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL---- 114 S E L E FGGE HA+ Y + ++ +L D ++FN+ +Q +FK + Sbjct: 75 SPDEARLARECFGGEVHAFAAGYSEADMVELLETVDHVLFNSFAQWERFKGMVEAKNAGR 134 Query: 115 --HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------------KNVN 159 + G+R+NP S + DP P SRLG + ++ K ++ Sbjct: 135 ATPIECGIRVNPEHSEGAVPMYDPCAPGSRLGVRLREFERFASAGGCPAQTPPPGLKGLS 194 Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219 GL FH CE LK E +FG ++ ++W++ GGG H T + Y + C+ ++ Sbjct: 195 GLHFHTLCEQG-ADALDRTLKAFEMKFGRYLKGLKWMNFGGGHHITKEGYDIDLLCKCIE 253 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 ++Y VQ+YLEPGEA+ N L +TVLD+ + I+D+S H+PD L Sbjct: 254 RVRDRYGVQVYLEPGEAVALNAGVLVSTVLDVVRADMPVAILDTSAATHMPDVLEMPYRP 313 Query: 280 TIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P ++ + G+SCLAGD+ GE+ F++P+K GDR+ F D+A Y++ + FN Sbjct: 314 MVIGSGEPGEKRWSCRLAGKSCLAGDVIGEYSFDEPLKAGDRLVFTDMAIYSMVKTTTFN 373 Query: 336 GINMPTIAVKN-VDGTIKAIREFSYNDYYNNLS 367 G+ +P+I N + +REF Y D+ LS Sbjct: 374 GLRLPSIVRWNPETDETRLVREFGYEDFKMRLS 406 >gi|291288495|ref|YP_003505311.1| carboxynorspermidine decarboxylase [Denitrovibrio acetiphilus DSM 12809] gi|290885655|gb|ADD69355.1| carboxynorspermidine decarboxylase [Denitrovibrio acetiphilus DSM 12809] Length = 386 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 138/371 (37%), Positives = 208/371 (56%), Gaps = 7/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP YLI + + N + Y++K+ G K+LLALK FA +F +++Y+ G +S Sbjct: 18 VKTPCYLISRDVIKCNCELLDYVQKHTGAKILLALKAFAMPAVFPLISEYLHGVCASGPI 77 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E +G E+FG E H Y+ A+ D + + + D I+FN+VSQ FKDK K++GLR Sbjct: 78 EAQMGREEFGREVHTYSPAFTDEQFERTVRYSDHIVFNSVSQWKLFKDK-IPAEKEVGLR 136 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP + + L +P SR G D ++K ++GL FH CE S +L++ Sbjct: 137 VNPGHAEVEVDLYNPCISGSRFGVNPADLEGVDLKGIDGLHFHAMCEQNS-DVLVRILES 195 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-VQIYLEPGEAIVTN 240 EK FGH I Q++WI+ GGG H T DY V + + F E+Y+ +++YLEPGEA+V N Sbjct: 196 FEKRFGHLIPQMKWINFGGGHHITRDDYDVDLLIETVLSFRERYNGIRVYLEPGEAVVLN 255 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296 T+VLD +N ++ ++D S E H+PD L + +T + G S Sbjct: 256 AGVFVTSVLDTIKNGVDIAVMDCSAETHMPDVLAMPYRPHLIEADEAGKKAHTYKLGGIS 315 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD G + FE +K GDR+ F D+A Y+ + FNG+ +P +AV + G ++ +R Sbjct: 316 CLAGDFIGTYSFEHELKRGDRLVFTDMALYSFVKNTSFNGVELPDLAVFDNSGAVEVVRR 375 Query: 357 FSYNDYYNNLS 367 F Y DY LS Sbjct: 376 FGYADYKGRLS 386 >gi|255009479|ref|ZP_05281605.1| putative carboxynorspermidine decarboxylase [Bacteroides fragilis 3_1_12] gi|313147250|ref|ZP_07809443.1| carboxynorspermidine decarboxylase [Bacteroides fragilis 3_1_12] gi|313136017|gb|EFR53377.1| carboxynorspermidine decarboxylase [Bacteroides fragilis 3_1_12] Length = 379 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 120/373 (32%), Positives = 194/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y+ +T+SS+YE Sbjct: 8 PSPCYIMEEELLRKNLSLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIGHSTASSVYE 67 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN+++Q ++F A G+ Sbjct: 68 ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSMAQFHRFYPMTVAGGSDISCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 RINP S + L +P P +R G E + + G H +CE+ SF L+ Sbjct: 128 RINPEYSEVETELYNPCAPGTRFGITADLLPEQLPQGIEGFHCHCHCESSSFE-LERTLQ 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E++F + +QI+W++LGGG T KDY + L+ ++Y +I LEPG A Sbjct: 187 HLEEKFSPWFSQIKWLNLGGGHLMTRKDYDTEHLIGLLQGLKKRYPHLRIILEPGSAFTW 246 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L + GP+ + G Sbjct: 247 QTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAVMGEEGPFVYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ G + Sbjct: 307 NSCLSGDYMGSWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTASGNAEIF 366 Query: 355 REFSYNDYYNNLS 367 ++FSY DY N +S Sbjct: 367 KQFSYEDYRNRMS 379 >gi|326564169|gb|EGE14405.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 12P80B1] Length = 400 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 184/382 (48%), Positives = 248/382 (64%), Gaps = 16/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TPYYL+D++ +++NL + +G K LLALKCFA WG+F+++ Y+ GTTSSSL Sbjct: 19 IQTPYYLLDERAIIDNLSVTQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSSLK 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG E FGGETHAY+VAY D EI VL CD IIFN+++QL +F A + +GLR Sbjct: 79 EVRLGKECFGGETHAYSVAYADHEIKEVLGYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S S FI+ADP RPFSRLGE + I + + G+M HNNCEN F FS L + Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG ++EWIS GGGIH+ D++YP+ F RLK FSE Y VQIYLEPGEA V Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286 L T+VLD+ N K L +VD+S+EAH+ D L+Y++S+ + Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETTYDITGADFDGTSA 318 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + + G+SCLAGDIFG++ +P+KIGD+++F + A Y + +KNWFNG++MP+I + Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 DG I R+F Y DY +LS Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400 >gi|237714592|ref|ZP_04545073.1| carboxynorspermidine decarboxylase [Bacteroides sp. D1] gi|262406458|ref|ZP_06083007.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_22] gi|294643700|ref|ZP_06721500.1| carboxynorspermidine decarboxylase [Bacteroides ovatus SD CC 2a] gi|294805868|ref|ZP_06764739.1| carboxynorspermidine decarboxylase [Bacteroides xylanisolvens SD CC 1b] gi|298481117|ref|ZP_06999311.1| carboxynorspermidine decarboxylase [Bacteroides sp. D22] gi|229445361|gb|EEO51152.1| carboxynorspermidine decarboxylase [Bacteroides sp. D1] gi|262355161|gb|EEZ04252.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_22] gi|292640938|gb|EFF59156.1| carboxynorspermidine decarboxylase [Bacteroides ovatus SD CC 2a] gi|294446932|gb|EFG15528.1| carboxynorspermidine decarboxylase [Bacteroides xylanisolvens SD CC 1b] gi|298272691|gb|EFI14258.1| carboxynorspermidine decarboxylase [Bacteroides sp. D22] Length = 379 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 117/373 (31%), Positives = 192/373 (51%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y+ +T+SS+YE Sbjct: 8 PSPCYIMEEELLRKNLCLIKNVADRAGVEIILAFKSFAMWRSFPIFREYIAHSTASSVYE 67 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++ Q +F A+ G+ Sbjct: 68 ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGSGISCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G + + + G H +CE+ S+ L+ Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPDVLPQGIEGFHCHCHCESSSYE-LERTLE 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E +F + QI+W++LGGG T KDY + L+ ++ +I LEPG A + Sbjct: 187 HLEAKFSRWFPQIKWLNLGGGHLMTRKDYDTEHLITLLQGLKARHPHLRIILEPGSAFIW 246 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L + N G Y + G Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ P++IG+RI FED+ Y + + N FNGI+ P IA+ +G + Sbjct: 307 NSCLSGDYMGLWSFDHPLQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 366 Query: 355 REFSYNDYYNNLS 367 ++FSY DY +S Sbjct: 367 KQFSYEDYRGRMS 379 >gi|253565787|ref|ZP_04843242.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_2_5] gi|251946066|gb|EES86473.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_2_5] Length = 379 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 119/373 (31%), Positives = 194/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + +AGV+++LA K FA W F +Y+ +T+SS YE Sbjct: 8 PSPCYIMEEELLRKNLSLIKSVADDAGVEIILAFKSFAMWRSFPIFREYIGHSTASSAYE 67 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++SQ ++F A+ G+ Sbjct: 68 ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFSRFYPLTVAEGSGISCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G + + G H +CE+ SF L+ Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPARLPQGIEGFHCHCHCESSSFE-LERTLQ 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E++F + +QI+W++LGGG T KDY + L+ ++Y +I LEPG A Sbjct: 187 HLEEKFSPWFSQIKWLNLGGGHLMTRKDYDTRHLTGLLQGLKKRYPHLRIILEPGSAFTW 246 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L + GP+ + G Sbjct: 247 QTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAVMGEEGPFVYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++ G+RI FED+ Y + + N FNGI+ P IA+ DG + Sbjct: 307 NSCLSGDYMGAWSFDHELQAGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTADGKAEIF 366 Query: 355 REFSYNDYYNNLS 367 R+FSY DY + +S Sbjct: 367 RQFSYEDYRDRMS 379 >gi|326560498|gb|EGE10880.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 7169] Length = 400 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 184/382 (48%), Positives = 248/382 (64%), Gaps = 16/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TPYYL+D++ +++NL + +G K LLALKCFA WG+F+++ Y+ GTTSSSL Sbjct: 19 IQTPYYLLDERAIIDNLSVTQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSSLK 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG E FGGETHAY+VAY D EI VL CD IIFN+++QL +F A + +GLR Sbjct: 79 EVRLGKECFGGETHAYSVAYADHEIKEVLGYCDKIIFNSINQLKRFGPLAHDKNIPVGLR 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S S FI+ADP RPFSRLGE + I + + G+M HNNCEN F FS L + Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG ++EWIS GGGIH+ D++YP+ F RLK FSE Y VQIYLEPGEA V Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286 L T+VLD+ N K L +VD+S+EAH+ D L+Y++S+ + Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETTYDITGADFDGTSA 318 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + + G+SCLAGDIFG++ +P+KIGD+++F + A Y + +KNWFNG++MP+I + Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 DG I R+F Y DY +LS Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400 >gi|260427552|ref|ZP_05781531.1| carboxynorspermidine decarboxylase [Citreicella sp. SE45] gi|260422044|gb|EEX15295.1| carboxynorspermidine decarboxylase [Citreicella sp. SE45] Length = 363 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 205/366 (56%), Positives = 268/366 (73%), Gaps = 3/366 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPYYLIDK +LL N++ +R+ +G K LLALKCFA W +FD +++YMDGTTSSSL+ Sbjct: 1 MQTPYYLIDKSRLLANMEKVARLRELSGAKALLALKCFATWSVFDLMSEYMDGTTSSSLF 60 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG EKF GETHAY+VA+ D EID VL++ D IIFNTV Q ++F++ ++ GLR Sbjct: 61 EVKLGREKFPGETHAYSVAWADDEIDEVLASSDKIIFNTVGQFSRFEEVSRGHT--RGLR 118 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS S F LADP RPFSRLGE + I + ++G MFHNNCEN F F AML Sbjct: 119 VNPGVSTSSFDLADPARPFSRLGEHDPEVIAPVLDQISGFMFHNNCENADFERFDAMLGA 178 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE+ FGH I +++WISLGGGIHFT + YP++ +RL+ F+ + VQ+YLEPGEA +T + Sbjct: 179 IEQRFGHLIREMKWISLGGGIHFTGEGYPLERLAERLRRFAGENEVQVYLEPGEAAITKS 238 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 TTL TVLD N KNL IVDSS+EAH+ D L+Y+ESA + +G MVCG+SCLAGD Sbjct: 239 TTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYRESARMEQ-SGDQEWMVCGKSCLAGD 297 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 IFGEF F P+K GDRIS +D AGY + +KNWFNG+ MP+IA++ +DGT + +R+F+Y D Sbjct: 298 IFGEFRFPAPLKAGDRISIQDAAGYTMVKKNWFNGVKMPSIAIRELDGTERLVRDFTYED 357 Query: 362 YYNNLS 367 + LS Sbjct: 358 FAAALS 363 >gi|326570423|gb|EGE20463.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis BC8] Length = 400 Score = 261 bits (668), Expect = 9e-68, Method: Composition-based stats. Identities = 183/382 (47%), Positives = 248/382 (64%), Gaps = 16/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TPYYL+D++ +++NL + +G K LLALKCFA WG+F+++ Y+ GTTSSSL Sbjct: 19 IQTPYYLLDERAIIDNLSVTQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSSLK 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+ LG E FGGETHAY+VAY D EI VL CD IIFN+++QL +F A + +GLR Sbjct: 79 EMRLGKECFGGETHAYSVAYADHEIKEVLGYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S S FI+ADP RPFSRLGE + I + + G+M HNNCEN F FS L + Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG ++EWIS GGGIH+ D++YP+ F RLK FSE Y VQIYLEPGEA V Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286 L T+VLD+ N K L +VD+S+EAH+ D L+Y++S+ + Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETTYDITGADFDGTST 318 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + + G+SCLAGDIFG++ +P+KIGD+++F + A Y + +KNWFNG++MP+I + Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 DG I R+F Y DY +LS Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400 >gi|319902364|ref|YP_004162092.1| carboxynorspermidine decarboxylase [Bacteroides helcogenes P 36-108] gi|319417395|gb|ADV44506.1| carboxynorspermidine decarboxylase [Bacteroides helcogenes P 36-108] Length = 381 Score = 261 bits (668), Expect = 9e-68, Method: Composition-based stats. Identities = 121/373 (32%), Positives = 196/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y++ +T+SS+YE Sbjct: 10 PSPCYIMEEELLRRNLTLIKSVADRAGVEIILAFKSFAMWRSFPVFREYIEHSTASSVYE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++ Q ++F A+ G+ Sbjct: 70 ARLALEEFGSKAHTYSPAYTEADFPEIMRCSGHITFNSLMQFHRFYPMTVAEGSGISCGI 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 RINP S + L +P P +R G E + G H +CE+ S+ L+ Sbjct: 130 RINPEYSEVETELYNPCAPGTRFGLMADQLPEILPYGIEGFHCHCHCESSSYE-LEHTLE 188 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 +E +F + +QI+W++LGGG T KDY ++ + L+ E+Y QI LEPG A Sbjct: 189 RMEGKFSKWFSQIKWLNLGGGHLMTRKDYDIEHLIRLLQGLKERYPHLQIILEPGSAFTW 248 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI EN V + S H+PD L ++ + G + + G Sbjct: 249 QTGVLTSEVVDIVENRGIRTAVLNVSFTCHMPDCLEMPYQPSVRGAQIGSEGAHVYRLGG 308 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ +G + Sbjct: 309 NSCLSGDYMGFWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAMWTEEGNAEIF 368 Query: 355 REFSYNDYYNNLS 367 ++FSY DY + +S Sbjct: 369 KQFSYEDYRDRMS 381 >gi|29346084|ref|NP_809587.1| carboxynorspermidine decarboxylase [Bacteroides thetaiotaomicron VPI-5482] gi|29337978|gb|AAO75781.1| carboxynorspermidine decarboxylase [Bacteroides thetaiotaomicron VPI-5482] Length = 379 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 118/373 (31%), Positives = 197/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y++ +T+SS+YE Sbjct: 8 PSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 67 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN+++Q +F A+ G+ Sbjct: 68 ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMAQFRRFYPMTVAEGSGISCGI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G ++ K + G H +CE+ SF L+ Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGMTADLLPDTLPKGIEGFHCHCHCESSSFE-LERTLQ 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E+++ + QI+W++LGGG T KDY + + L++ +Y QI LEPG A Sbjct: 187 HLEEKYSRWFPQIKWLNLGGGHLMTRKDYDTEHLIKLLQDLKARYPHLQIILEPGSAFTW 246 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L + N G + + G Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGEFIYRLGG 306 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ +G + Sbjct: 307 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTKEGKAEIY 366 Query: 355 REFSYNDYYNNLS 367 ++FSY DY + +S Sbjct: 367 KQFSYEDYRDRMS 379 >gi|167762855|ref|ZP_02434982.1| hypothetical protein BACSTE_01213 [Bacteroides stercoris ATCC 43183] gi|167699195|gb|EDS15774.1| hypothetical protein BACSTE_01213 [Bacteroides stercoris ATCC 43183] Length = 381 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 121/373 (32%), Positives = 195/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y++ +T+SS+YE Sbjct: 10 PSPCYIMEEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120 L E+FG H Y+ AY + + ++ I FN+++Q +F A G+ Sbjct: 70 ARLALEEFGSRAHTYSPAYTEADFPEIMRCSSHITFNSLAQFRRFYPMIQAAGQDISCGI 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G + + + ++G H +CE+ S+ L+ Sbjct: 130 RVNPEYSEVETELYNPCAPGTRFGVMAEQLPDVLPQGIDGFHCHCHCESSSYE-LERTLE 188 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E +F + QI+W++LGGG T KDY V+ + L+ E+Y +I LEPG A Sbjct: 189 HLEAKFSRWFPQIKWLNLGGGHLMTRKDYDVEHLIRLLRGLKERYPHLRIILEPGSAFTW 248 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCG 294 T L + V+DI EN + + S H+PD L + G Y + G Sbjct: 249 QTGVLASEVVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAEMGDGGAYVYRLGG 308 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ +G + Sbjct: 309 NSCLSGDYMGLWSFDHELQIGERIIFEDMIHYTMVKTNMFNGIHHPAIAMWTKEGKAEIF 368 Query: 355 REFSYNDYYNNLS 367 R+FSY DY N +S Sbjct: 369 RKFSYEDYRNRMS 381 >gi|260642514|ref|ZP_05416160.2| carboxynorspermidine decarboxylase [Bacteroides finegoldii DSM 17565] gi|260621759|gb|EEX44630.1| carboxynorspermidine decarboxylase [Bacteroides finegoldii DSM 17565] Length = 380 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 120/373 (32%), Positives = 194/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y+ +T+SS+YE Sbjct: 9 PSPCYIMEEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIRHSTASSVYE 68 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN+++Q +F + G+ Sbjct: 69 ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMAQFERFYSMTVTEGSGISCGI 128 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G E+ + + G H +CE+ S+ L+ Sbjct: 129 RVNPEYSEVETELYNPCAPGTRFGITADLLPETLPQGIEGFHCHCHCESSSYE-LERTLE 187 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E +F + QI+W++LGGG T KDY + + LKE +Y QI LEPG A Sbjct: 188 HLESKFSRWFPQIKWLNLGGGHLMTRKDYDTEHLIKLLKELRTRYPHLQIILEPGSAFTW 247 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCG 294 T L + V+DI E+ + + S H+PD L + N G Y + G Sbjct: 248 QTGVLASEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVSGAEMGNEGKYIYRLGG 307 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ +G + Sbjct: 308 NSCLSGDYMGLWSFDHKLQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 367 Query: 355 REFSYNDYYNNLS 367 ++FSY DY + +S Sbjct: 368 KQFSYEDYRDRMS 380 >gi|299856844|pdb|3MT1|A Chain A, Crystal Structure Of Putative Carboxynorspermidine Decarboxylase Protein From Sinorhizobium Meliloti gi|299856845|pdb|3MT1|B Chain B, Crystal Structure Of Putative Carboxynorspermidine Decarboxylase Protein From Sinorhizobium Meliloti Length = 365 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 209/366 (57%), Positives = 262/366 (71%), Gaps = 2/366 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TPYYLIDK KL N + ++R+ +G K LLALKCFA W +FD Y DGTTSSSL+ Sbjct: 2 IETPYYLIDKAKLTRNXERIAHVREKSGAKALLALKCFATWSVFDLXRDYXDGTTSSSLF 61 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG E+FG ETHAY+VAY D EID V+S+ D IIFN++SQL +F DKA GLR Sbjct: 62 EVRLGRERFGKETHAYSVAYGDNEIDEVVSHADKIIFNSISQLERFADKA--AGIARGLR 119 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS S F LADP RPFSRLGE K+E +NG HNNCENK F F L Sbjct: 120 LNPQVSSSSFDLADPARPFSRLGEWDVPKVERVXDRINGFXIHNNCENKDFGLFDRXLGE 179 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE+ FG I +++W+SLGGGIHFT DYPV F RL+ FS++Y VQIYLEPGEA +T + Sbjct: 180 IEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLRAFSDRYGVQIYLEPGEASITKS 239 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 TTL TVLD N KNL IVDSS+EAH D L+Y+E+A + PN G ++ +CG+SCLAGD Sbjct: 240 TTLEVTVLDTLYNGKNLAIVDSSIEAHXLDLLIYRETAKVLPNEGSHSYXICGKSCLAGD 299 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 +FGEF F + +K+GDRISF+D AGY +KNWFNG+ P IA++ +DG+++ +REF+Y D Sbjct: 300 VFGEFRFAEELKVGDRISFQDAAGYTXVKKNWFNGVKXPAIAIRELDGSVRTVREFTYAD 359 Query: 362 YYNNLS 367 Y +LS Sbjct: 360 YEQSLS 365 >gi|317152607|ref|YP_004120655.1| carboxynorspermidine decarboxylase [Desulfovibrio aespoeensis Aspo-2] gi|316942858|gb|ADU61909.1| carboxynorspermidine decarboxylase [Desulfovibrio aespoeensis Aspo-2] Length = 396 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 134/384 (34%), Positives = 202/384 (52%), Gaps = 19/384 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP +++D+ L +NLD +R+ AG K+LLALKCFA F L +DG +SS + Sbjct: 14 VKTPCFVVDEGLLRDNLDILASVRQRAGCKVLLALKCFAMHSTFPLLAPQLDGVCASSPH 73 Query: 62 EVMLGHEKFGG-------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---- 110 E LG E+F E H + + + +I + D I+FN+ +QL++F+ Sbjct: 74 EARLGCEEFAPHCRPGTGEVHTFAAGFSEADIRDLCQTSDHIVFNSFAQLDRFRPLVREL 133 Query: 111 --AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 A ++ LRINP S + DP P SRLG + + + V GL +HN CE Sbjct: 134 AEANGRAIELALRINPEHSEGATPIYDPCAPGSRLGIRRAHFDPANLDGVTGLHWHNLCE 193 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 C + +E F + ++ +++ GGG H T Y V + + F EK+ V+ Sbjct: 194 QD-ADCLERTVAAVEASFADVLPRMRYVNFGGGHHITRPGYDVDLLVRIITRFKEKWGVE 252 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PN 284 +YLEPGEA+ N L TTVLD+ ++VI+DS+V H+PD + I P Sbjct: 253 VYLEPGEAVALNAGYLVTTVLDVIRADMDIVIMDSAVPCHMPDVIEMPYRPHIVGSGEPG 312 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI-A 343 +T + G SCLAGD+ GE+ F+ P GDR+ F D+A Y++ + N FNGI +P+I Sbjct: 313 DKAWTCRIGGPSCLAGDVAGEYSFDTPPMTGDRLVFTDMAIYSMVKTNTFNGIQLPSIRI 372 Query: 344 VKNVDGTIKAIREFSYNDYYNNLS 367 + G + +R F Y D+ N LS Sbjct: 373 FRPQTGEMVTVRSFGYQDFKNRLS 396 >gi|326575703|gb|EGE25626.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis CO72] Length = 400 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 184/382 (48%), Positives = 248/382 (64%), Gaps = 16/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TPYYL+D++ +++NL + +G K LLALKCFA WG+F+++ Y+ GTTSSSL Sbjct: 19 IQTPYYLLDERAIIDNLSVTQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSSLK 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG E FGGETHAY+VAY D EI VL CD IIFN+++QL +F A + +GLR Sbjct: 79 EVRLGKECFGGETHAYSVAYADHEIKEVLDYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S S FI+ADP RPFSRLGE + I + + G+M HNNCEN F FS L + Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEYDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG ++EWIS GGGIH+ D++YP+ F RLK FSE Y VQIYLEPGEA V Sbjct: 199 IENHFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT---------------- 285 L T+VLD+ N K L +VD+S+EAH+ D L+Y++S+ + Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNDTAYDITGADFDGTSA 318 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + + G+SCLAGDIFG++ +P+KIGD+++F + A Y + +KNWFNG++MP+I + Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 DG I R+F Y DY +LS Sbjct: 379 RQDGKIMIQRQFDYEDYKASLS 400 >gi|325284224|ref|YP_004256765.1| carboxynorspermidine decarboxylase [Deinococcus proteolyticus MRP] gi|324316033|gb|ADY27148.1| carboxynorspermidine decarboxylase [Deinococcus proteolyticus MRP] Length = 410 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 125/388 (32%), Positives = 214/388 (55%), Gaps = 23/388 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 I +P +++D+ +L NL Y+++ +G ++++A K F+ W F L +Y G T+SSL Sbjct: 24 IPSPAFVLDESRLRRNLALISYVQEKSGAQIIVAFKGFSMWSTFPILREYGITGATASSL 83 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK---- 116 EV+L E+ GE HAY AY + + +L D I+FN+V Q +F ++ + + Sbjct: 84 NEVILADEEMQGEVHAYAPAYSEEDFPEILRRSDHIVFNSVQQWERFAEQVEATRQEGRT 143 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 G+R+NP + + L +P PFSRLG ++ ++ ++GL FH CE K Sbjct: 144 IHAGIRVNPEYAEVETDLYNPAGPFSRLGVTRREFPDTLPAGIDGLHFHTLCE-KDSDTL 202 Query: 176 SAMLKNIEKEFGHFIT--QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 L+ +E++FG F+ QI+W++ GGG T + Y ++ + ++ F EK++V + LEP Sbjct: 203 ERTLEVLEEKFGEFLASEQIKWVNFGGGHLMTREGYDIERLIRVVRAFREKWNVHVILEP 262 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP------ 287 G A T L ++VLD+ N+K+ V++D SV AH+PD L I P Sbjct: 263 GSAFGWQTGWLVSSVLDVVHNVKDAVLLDVSVSAHMPDVLEMPYRPRILGAGDPPSDDHR 322 Query: 288 --------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + ++ G +CLAGD+ GE+ F +P+K+G R+ F+D+ Y + + +FNG+ Sbjct: 323 EAEDVPAGHPYIIGGTTCLAGDVVGEYVFPQPLKVGSRVVFDDMIHYTMVKTTFFNGVKH 382 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNLS 367 P I + + DG+ + ++ F Y ++ LS Sbjct: 383 PDIGILHADGSYERVKVFGYEEFKAKLS 410 >gi|319956673|ref|YP_004167936.1| carboxynorspermidine decarboxylase [Nitratifractor salsuginis DSM 16511] gi|319419077|gb|ADV46187.1| carboxynorspermidine decarboxylase [Nitratifractor salsuginis DSM 16511] Length = 389 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 138/372 (37%), Positives = 211/372 (56%), Gaps = 8/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++++ L NL I++ GVK+LLALK +A W F + +Y+DG +S L Sbjct: 18 LPSPCWVLEEHLLEYNLQILSAIKEATGVKILLALKGYALWHSFPLVREYLDGCCASGLC 77 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIG 119 E L E+FG E H Y+ A+K+ EID + ++FN+ +QL +F KA +G Sbjct: 78 EARLAAEEFGKEVHTYSPAFKEEEIDEIARLSHHLVFNSPAQLQRFGAAAKAANPALSLG 137 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LR+NP S + L +P +SRLG D E+ + + GL FH CE +L Sbjct: 138 LRVNPEYSEAPVELYNPCGAYSRLGTLAGDLDEASVDQIEGLHFHALCEQD-ASALEGVL 196 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 E++FG ++ Q++W++ GGG H T DY + LK+F ++ ++YLEPGEA+ Sbjct: 197 GVFEEKFGRWLPQLKWVNFGGGHHITRSDYDREKLIALLKDFRRRHPHLELYLEPGEAVG 256 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCG 294 T L TVLDI N ++ I+D+S EAH+PD ++ A + YT + G Sbjct: 257 WETGPLVATVLDIVHNGIDIAILDTSAEAHMPDTIIMPYRAQVRGAGKAGEKSYTYRLGG 316 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +CLAGDI G++ F++P+KIGDRI FED Y + + FNGI +P+IA + DG++ Sbjct: 317 NTCLAGDIMGDYSFDRPLKIGDRILFEDQMHYTMVKATTFNGIPLPSIATLHRDGSLSID 376 Query: 355 REFSYNDYYNNL 366 R F YND+ + L Sbjct: 377 RRFGYNDFKSRL 388 >gi|229825454|ref|ZP_04451523.1| hypothetical protein GCWU000182_00814 [Abiotrophia defectiva ATCC 49176] gi|229790017|gb|EEP26131.1| hypothetical protein GCWU000182_00814 [Abiotrophia defectiva ATCC 49176] Length = 401 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 127/378 (33%), Positives = 196/378 (51%), Gaps = 13/378 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP Y+ID+ K+ N + G K+LLA K F+ + + + +Y+ G T+S L+ Sbjct: 25 LKTPCYVIDEAKIEENCKILKAVMDETGAKILLAQKAFSGFYFYPLIGKYLAGATASGLF 84 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E+ E H ++ AYKD +++ + CD IIFN+V+QL K+K IG+R Sbjct: 85 EAKLGAEEMKKENHIFSPAYKDEDMEEITKICDHIIFNSVNQLKKYKKYCVDKGVSIGIR 144 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSFLC 174 INP S + DP SRLG + + V+GL FH CE Sbjct: 145 INPEFSTQEGHEIYDPCASGSRLGITLHTLENAITEESSLLDGVDGLHFHTLCEQG-AEP 203 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 L+ + K FG + ++W++ GGG H T +DY + + +KE + V++YLEPG Sbjct: 204 LRDTLEVVYKNFGKHLKNMKWLNFGGGHHITREDYNRELLIKCIKEAKALFDVEVYLEPG 263 Query: 235 EAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYT 289 EA+ N TT+LD + +I+D S H+PD + ++ + YT Sbjct: 264 EAVALNAGYSVTTILDKTTSGDTTNLILDISAACHMPDVIEMPYRPPLFTSGEAGEKKYT 323 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 + +CLAGDI G+F F++ IGD + F D+A Y+ + N FNG+ +P +AV DG Sbjct: 324 YRLGSCTCLAGDIIGDFSFDEEKNIGDMLIFGDMAIYSFVKNNTFNGMPLPDLAVLKKDG 383 Query: 350 TIKAIREFSYNDYYNNLS 367 ++ I+ F Y D+ LS Sbjct: 384 KVENIKSFGYGDFKERLS 401 >gi|103486686|ref|YP_616247.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256] gi|98976763|gb|ABF52914.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256] Length = 390 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 112/373 (30%), Positives = 185/373 (49%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D K+ +NL +I +G ++L ALK F+ W + T+ +Y+DG +S LY Sbjct: 19 VPSPAFVVDAAKIRSNLALLRHIGDASGARVLAALKAFSMWSLGPTVAEYLDGVCASGLY 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-----AQKLHK 116 E LG ++GGE Y YK+ ++ + + D +IFN+ Q+ +F+ A+ Sbjct: 79 EAKLGRAEYGGEVATYCAGYKEADLPEIAALSDHLIFNSPGQIARFRPLLDDLRAKGERF 138 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 +GLR+NP S + DP P SRLG + + V+G+ H+ CE Sbjct: 139 DVGLRVNPMHSEGEVAKYDPAAPCSRLGFPITQLLPEHMDGVDGVHMHSLCEQDFPPLER 198 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + F Q++WI+ GGG H T DY V D LK+ + +EPGEA Sbjct: 199 TWSA-VHPMLRPFFGQLKWINFGGGHHVTRADYQVDDLIAFLKQVRAATDCDVMIEPGEA 257 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA-MVCGR 295 I + L +LD+ N ++ I D S H+PD + + + G Sbjct: 258 IALDAGILVGELLDLFHNGMSIGITDISATCHMPDVIEAPYRPAMLGEGSEGAVTRLGGP 317 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354 SCLAGD+ G++ +IG R +F D A Y++ + N FNG+ +P+I + + + ++ I Sbjct: 318 SCLAGDVIGDYRLPGGARIGQRFAFLDQAHYSMVKTNTFNGVPLPSIWLWDSETDELELI 377 Query: 355 REFSYNDYYNNLS 367 R+F + D+ LS Sbjct: 378 RQFGFEDFKTRLS 390 >gi|78777378|ref|YP_393693.1| carboxynorspermidine decarboxylase [Sulfurimonas denitrificans DSM 1251] gi|78497918|gb|ABB44458.1| Carboxynorspermidine decarboxylase [Sulfurimonas denitrificans DSM 1251] Length = 382 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 142/377 (37%), Positives = 213/377 (56%), Gaps = 12/377 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TPYY+ D+ L NL+ Y++K +G K++LALK FA W F + QY+ G T S L+ Sbjct: 7 ISTPYYMCDESLLRANLEILDYVQKQSGAKIILALKGFAMWSTFPLVKQYLRGCTCSGLH 66 Query: 62 EVMLGHEKFGGE-----THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKL 114 E +L E+F E H Y+ A+KD +ID + + I+FN+ +QL K+ D+ Sbjct: 67 EALLAREEFAKEDKNLEVHTYSPAFKDEDIDEIARISNHIVFNSPTQLFKYCDRVKKINP 126 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 H + LRINP S S + +P +SRLG + E +++++GL FH CE Sbjct: 127 HVNLSLRINPEQSSSPKDIYNPCGLYSRLGTTLANFDERVLEHIDGLNFHALCEQD-VDA 185 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 +L E++F + +++I+ GGG H T K Y V + +KEF KY V++YLEPG Sbjct: 186 LEDVLVAFEEKFSKYFKNMKYINFGGGHHITKKGYDVDKLIKIIKEFITKYDVEVYLEPG 245 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTA 290 EA+ T L ++VLDI N ++ I+D+S EAH+PD L A + + +T Sbjct: 246 EAVGWQTGVLVSSVLDIVHNGIDIAILDTSAEAHMPDTLAMPYRAMVRRSGEAGEKKHTY 305 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350 G +CLAGDI G++ F+KP+ +GD++ FED Y + FNGI +P++ + D T Sbjct: 306 RFGGNTCLAGDIMGDYSFDKPLYVGDKVIFEDQIHYTFVKNTTFNGIKLPSLVILREDKT 365 Query: 351 IKAIREFSYNDYYNNLS 367 + I+EF Y DY N LS Sbjct: 366 LDVIKEFGYQDYRNRLS 382 >gi|157164290|ref|YP_001467543.1| carboxynorspermidine decarboxylase [Campylobacter concisus 13826] gi|112801111|gb|EAT98455.1| carboxynorspermidine decarboxylase [Campylobacter concisus 13826] Length = 379 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 143/372 (38%), Positives = 209/372 (56%), Gaps = 9/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IKTP Y+ ++ K+ NL+ Y+++ +G K+L+ALK FA G+ D + Y+DG T S L+ Sbjct: 8 IKTPAYVCEEAKVRKNLELLKYVKEQSGAKILVALKGFAFSGVMDMVGSYLDGATCSGLH 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E GE H Y+ A+KD + D +L I FN+ +Q KFK A + GLR Sbjct: 68 EAKFASEYVKGEIHTYSPAFKDEDFDEILKISKHITFNSFAQWQKFKGIALQNGIICGLR 127 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS + +P FSRLG + + + GL FH CE +S +L+ Sbjct: 128 VNPEVSLAPTDSYNPCAKFSRLGITKANFKPELLDGITGLHFHALCE-ESASSLQVVLEA 186 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG FI +++WI++GGG H T DY V+ + ++ F EKY V++YLEPGEA+ T Sbjct: 187 FEEKFGEFIPKMKWINMGGGHHITRADYDVELLIKIIRRFREKYGVEVYLEPGEAVGWQT 246 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCLA 299 L ++VLDI N K++ I+D+S EAH+PD +L + G + G +CLA Sbjct: 247 GFLISSVLDIVHNEKDIAILDTSAEAHMPDTVLMPYRPAVRGESKNGKFAYRFGGNTCLA 306 Query: 300 GDIFG------EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 GDI G E+ F+ +KIGDR+ FED Y I + FNGI +P + + +G IK Sbjct: 307 GDIVGLEAGDAEYKFDSELKIGDRVIFEDQIHYTIVKNTTFNGIKLPDLLLLKENGEIKM 366 Query: 354 IREFSYNDYYNN 365 IRE Y +Y Sbjct: 367 IRELDYEEYRRR 378 >gi|206603531|gb|EDZ40011.1| Diaminopimelate decarboxylase [Leptospirillum sp. Group II '5-way CG'] Length = 414 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 120/385 (31%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ ++ L + ++ + A+K + L + G S Sbjct: 25 VDSPVYIYSEKALREAYSSYQEAFQSHRTMIAYAMKANGNLQILSMLGKMGSGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E+ + + K +A+ + + +L++ A + K Sbjct: 85 ELFRARRAGIPSDRIVFAGVGKTEGEMREAIDAGILMFNVESSMELDRLSRVASSMGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC-- 167 + LR+NP V S+ G +E + + G+ H Sbjct: 145 PVALRVNPDVDPKTHPYISTGMKKSKFGIPVDQALEEYRRAARLPGIRIVGIHQHIGSQL 204 Query: 168 -ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223 E F + + ++ W+ +GGG+ + ++ + E Sbjct: 205 TEISPFRDAFDRMVAFARLLKENGIEVSWLDVGGGLGIRYGNEKPPTPREVAHEILSRLE 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY 282 +V I LEPG +IV N L T V + E + + D+ + + L Sbjct: 265 GLNVGIILEPGRSIVGNAGILVTEVQYLKETSVKMFYIADAGMNDLIRPSLYGAFHDLWP 324 Query: 283 PNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P + G C GD + PV+ GD ++ Y + +N Sbjct: 325 VIKKPGNGKKGDLVGPVCETGDFLVQDRELPPVEPGDLLAVMSAGAYGFAMASNYNARPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P + + D +Y D Sbjct: 385 PAEVLVSGDRFSVIRARETYEDLIR 409 >gi|284162042|ref|YP_003400665.1| diaminopimelate decarboxylase [Archaeoglobus profundus DSM 5631] gi|284012039|gb|ADB57992.1| diaminopimelate decarboxylase [Archaeoglobus profundus DSM 5631] Length = 419 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 80/389 (20%), Positives = 136/389 (34%), Gaps = 29/389 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ K KL N++ ++L A+K + + ++ G S Sbjct: 23 LGTPLYITSKAKLEENIEAYKRAF--PDAEILYAVKANNNLAIMRIIAKHGFGADVFSGG 80 Query: 62 EVMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 E+ + F +N D EI+ + +++ +L + A+K K + Sbjct: 81 ELYMARLAGFPSNKLLFNGNSKSDEEIEMGIDCNVKFSVDSLDELYTIQKIAEKKGKIVE 140 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170 I R+NP + S+ G +E+ K V G+ H + K Sbjct: 141 IAFRVNPDIDPKTHPKIATGLKTSKFGIPWDIALEAYKKAVELPNVKPVGIHCHIGSQIK 200 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 F L ++ E +I ++ +GGG+ +DF + + Sbjct: 201 EIDPFVEALNRLFDLAVEIEKLGVEIRFLDIGGGLAIDYTGEGAPTPQDFANEILPVFNE 260 Query: 225 Y------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 ++YLEPG ++V NTT L T V + + KN V VD+ + L Sbjct: 261 RKKELNSDPKLYLEPGRSLVGNTTILLTKVNAVKKAYKNFVAVDAGFNLLIRPVLYNAYH 320 Query: 279 ----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 A T + G C +GDI E V+ GD I+ D Y + + Sbjct: 321 RVAVANKMDKEAEETYTIVGPICESGDILAEDRKLPKVEKGDLIAIFDTGAYGFVMSSQY 380 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYY 363 NG + + SY D Sbjct: 381 NGRPRCAEVLVDGSRWYVVRERESYGDLI 409 >gi|307720965|ref|YP_003892105.1| carboxynorspermidine decarboxylase [Sulfurimonas autotrophica DSM 16294] gi|306979058|gb|ADN09093.1| carboxynorspermidine decarboxylase [Sulfurimonas autotrophica DSM 16294] Length = 379 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 148/377 (39%), Positives = 217/377 (57%), Gaps = 12/377 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+ +++ L NL Y+++ +G K++LALK FA W FD +Y+ G T+S LY Sbjct: 4 ISTPCYICEEELLEKNLKILEYVQQQSGAKIILALKGFAMWSTFDLAAKYLKGCTASGLY 63 Query: 62 EVMLGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKL 114 E L E+F E H Y+ AYK+ EI+ + D I+FN+ +QL K+ K Sbjct: 64 EAKLAREEFCKYNKNAEVHTYSPAYKEEEIEEIAKISDHIVFNSPNQLQKYICKVKEINP 123 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + LR+NP VS S + +P +SRLG ++ E +K ++GL FH CE Sbjct: 124 NIHVSLRVNPEVSSSPVDIYNPCGLYSRLGTTLQNFDEKVLKYIDGLNFHALCEQN-ADA 182 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 +L E++F + T +++I+ GGG H T KDY V+ +KEF KY+V +YLEPG Sbjct: 183 LEEVLAAFEEKFAKYFTNLKYINFGGGHHITKKDYDVEKLIWIIKEFRNKYNVDVYLEPG 242 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTA 290 EA+ T L +TVLD+ EN N+ I+D+S EAH+PD L A + N YT Sbjct: 243 EAVGWETGYLESTVLDVFENGMNIAILDTSAEAHMPDTLAMPYRAEVRGAGVANEKKYTY 302 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350 + G +CLAGDI G++ F+ P+ +GD I FED Y + FNG+ +P++A+K +G Sbjct: 303 RLGGNTCLAGDIMGDYSFDAPLHVGDTIIFEDQIHYTFVKNTTFNGVKLPSLAIKRKNGE 362 Query: 351 IKAIREFSYNDYYNNLS 367 I+ I+EF Y DY N LS Sbjct: 363 IEIIKEFGYEDYKNRLS 379 >gi|146278915|ref|YP_001169074.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides ATCC 17025] gi|145557156|gb|ABP71769.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides ATCC 17025] Length = 365 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 194/366 (53%), Positives = 256/366 (69%), Gaps = 2/366 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TP+YLID L N+ +R+ +G K LLALKCFA W FD + +MDGTTSSSL Sbjct: 1 MIQTPFYLIDSASLKRNMAVIDRLREGSGAKALLALKCFATWPAFDCMRDHMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID + D IIFN+V QL +F+D+ GL Sbjct: 61 YELRLGREKFGKETHAYSVAWPDHEIDEAVGYADKIIFNSVGQLQRFRDR--TRGIARGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LADP RPFSRLGE +KIE+ + +++G+M H NCEN F F L Sbjct: 119 RLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNCENADFDLFDRQLA 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE FG + +++W+SLGGGIHFT + YPV RLK F+ + VQ+YLEPGEA +T Sbjct: 179 EIEGRFGAILDRLDWVSLGGGIHFTGEGYPVDRLAARLKAFAAAHGVQVYLEPGEAAITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + TL TVLD+ +N K L IVDSSVEAH+ D L+Y++SA + + G ++ MVCG+SCLAG Sbjct: 239 SATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIYRQSAKVEHDAGDHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F +P+K+GDR+S D AGY + +KNWFNG+ MP+I ++ DG+++ REF Y Sbjct: 299 DIFGEFRFAEPLKVGDRLSIADAAGYTMVKKNWFNGVKMPSIVIREPDGSLRVAREFGYG 358 Query: 361 DYYNNL 366 DY ++L Sbjct: 359 DYASSL 364 >gi|332971104|gb|EGK10071.1| carboxynorspermidine decarboxylase [Psychrobacter sp. 1501(2011)] Length = 377 Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 199/377 (52%), Positives = 259/377 (68%), Gaps = 10/377 (2%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M+KTPYY ID L NL+ + + +G K LLALKCFA WG+FD + Y+ GTTSSSL Sbjct: 1 MLKTPYYQIDVAALKQNLEIVQRLCELSGAKALLALKCFATWGVFDEMKPYLHGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LG E+FGGETHAY+VAY EID VL+ D IIFN+ +QL+ FKDKA+ +GL Sbjct: 61 NEVRLGKEEFGGETHAYSVAYGADEIDEVLTYADKIIFNSFNQLHAFKDKAKAQDVPVGL 120 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 RINP S S FI+ADP RPFSRLGE DKI+ IK++ G+M HNNCEN SF FSA L+ Sbjct: 121 RINPKTSNSSFIIADPARPFSRLGEHDIDKIKPVIKDITGVMIHNNCENDSFEAFSASLE 180 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE +FG Q+EW+SLGGGIHF DYP++ RLK+FSEKY VQIYLEPGEA + + Sbjct: 181 DIETKFGELFYQLEWVSLGGGIHFIAPDYPLEKLAARLKDFSEKYGVQIYLEPGEACIHD 240 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA----------TIYPNTGPYTA 290 L TTVLD N K L +VD+S+EAH+ D L+Y+E+A + + Sbjct: 241 AAKLVTTVLDTLHNGKPLAVVDASIEAHMLDLLIYRETAPLVQINEQSCHMTSQQTDDST 300 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350 ++ G+SCLAGDIFGE+ EKP+ IGD+++F + AGY + +KNWFNG+ MP+I + + G Sbjct: 301 IIYGKSCLAGDIFGEYALEKPLSIGDKVAFGNAAGYTMVKKNWFNGVAMPSIVICDEQGE 360 Query: 351 IKAIREFSYNDYYNNLS 367 +K + F Y D+ ++LS Sbjct: 361 LKVQKTFGYEDFKSSLS 377 >gi|332559940|ref|ZP_08414262.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides WS8N] gi|332277652|gb|EGJ22967.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides WS8N] Length = 365 Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 193/366 (52%), Positives = 258/366 (70%), Gaps = 2/366 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLID +L N+ +R+ +G K LLALKCFA W F+ + +MDGTTSSSL Sbjct: 1 MIQTPYYLIDADRLRQNMAVVDRLRQASGAKALLALKCFATWPAFEHMRDHMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID + D IIFN+V QL +F+D+ + GL Sbjct: 61 YELRLGREKFGKETHAYSVAWPDHEIDEAVGYADKIIFNSVGQLQRFRDRTGGIA--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LADP RPFSRLGE +KIE+ + +++G+M H NCEN F L Sbjct: 119 RLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNCENADVDLFDRQLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE FG + +++W+SLGGGIHFT + YPV RLK F+ + VQ+YLEPGEA +T Sbjct: 179 EIEGRFGAILDRLDWVSLGGGIHFTGEGYPVDRLAARLKAFAAAHGVQVYLEPGEAAITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + TL TVLD+ +N K L IVDSSVEAH+ D L+Y++SA + P+ G ++ MVCG+SCLAG Sbjct: 239 SATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIYRQSAKVEPDAGDHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F +P+++GDR+S D AGY + +KNWFNG+ MP+I ++ DG+++ REF Y Sbjct: 299 DIFGEFRFAQPLQVGDRLSIADAAGYTMVKKNWFNGVKMPSIVIREPDGSLRVAREFGYG 358 Query: 361 DYYNNL 366 DY ++L Sbjct: 359 DYASSL 364 >gi|218132554|ref|ZP_03461358.1| hypothetical protein BACPEC_00413 [Bacteroides pectinophilus ATCC 43243] gi|217992280|gb|EEC58283.1| hypothetical protein BACPEC_00413 [Bacteroides pectinophilus ATCC 43243] Length = 420 Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 131/410 (31%), Positives = 211/410 (51%), Gaps = 44/410 (10%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++KTP Y++D++ L +NL+ + K+ G ++LLA K F+ + + + +Y+ GTT+SSL Sbjct: 12 LVKTPAYVVDERLLRDNLEILADVIKDTGCRILLAQKGFSMFCEYPLIGRYLCGTTASSL 71 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH----- 115 YE LG E GETH + AY++ E +LS CD ++FN++ Q KF+ K + Sbjct: 72 YEARLGKEHMQGETHIFAPAYREEEFPQILSVCDHVVFNSLEQWIKFRTKVWECDNRGVV 131 Query: 116 -----------------KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI------E 152 G+R+NP + + + +P SRLG + Sbjct: 132 PAPFMMDVHGDEHASQVHSCGIRVNPGYAEVEHEIYNPCCAGSRLGSTLAEFEETLSKYP 191 Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK 212 + ++GL FH CE S +L + FG +I ++W++ GGG H T KDY ++ Sbjct: 192 DALDGISGLHFHALCEQNS-DTLERVLDHFLDSFGKYIEGMKWVNFGGGHHITRKDYDIE 250 Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE------ 266 + ++ +++ V +YLEPGEA+ NT L +TVLD+ D VE Sbjct: 251 LLKKCIRRVQDEFGVTVYLEPGEAVALNTGYLVSTVLDVQNKTFYTTDGDREVEMTPVIL 310 Query: 267 -----AHVPDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 H+PD L I + Y + G +CLAGDI G++ F+ P+K GDR Sbjct: 311 DTSAACHMPDVLEMPYRPYILDSGMPGEKQYNYRLGGNTCLAGDIIGDYSFDAPLKAGDR 370 Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + F D+A Y++ + N FNGI +P IA ++DG ++ ++EF Y D+ + LS Sbjct: 371 LVFTDMAHYSMVKNNTFNGIGLPAIAACDMDGRLRVVKEFGYEDFKSRLS 420 >gi|296283678|ref|ZP_06861676.1| carboxynorspermidine decarboxylase [Citromicrobium bathyomarinum JL354] Length = 390 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 121/373 (32%), Positives = 186/373 (49%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP +++D KL N IR A +K+L ALK F+ W + +Y+DG +S L+ Sbjct: 19 VDTPAFVVDAAKLRENCRILAEIRDEAEIKMLSALKAFSMWSTAPIIGEYLDGVCTSGLW 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-----AQKLHK 116 E L E + GE Y AYK E++ V D +IFN+ Q+ + A Sbjct: 79 EARLASEFYDGEISTYCAAYKPEELEEVARLSDHVIFNSPGQMRRAALILEQAKASGGAF 138 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 +GLRINP V + DP+ P SRLG E ++ V G+ FHN CE F Sbjct: 139 DVGLRINPQVPTGEVPRYDPSSPGSRLGFPLSQLTEEHMEGVEGIHFHNLCEQG-FEPLH 197 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + + Q++WI++GGG H T DY ++ + L++ + +IYLEPGEA Sbjct: 198 RTWDRVFDAIEPYFGQLKWINMGGGHHITRADYEREELIEFLRDAKDDTGAEIYLEPGEA 257 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT-GPYTAMVCGR 295 + + L T+LD EN + I D S H+PD + + G + G Sbjct: 258 VALDAGILVGTILDTGENDGPIAITDISATCHMPDVIEAPYRPAMLHEKAGEPPVRLGGP 317 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354 SCLAGD+ GE+ P + G RI+F D A Y++ + N FNG+ +P+I + + + ++ + Sbjct: 318 SCLAGDVIGEYSLPVPNEAGQRIAFLDQAHYSMVKTNTFNGVPLPSIWLWDSETDVLECV 377 Query: 355 REFSYNDYYNNLS 367 + F Y ++ N LS Sbjct: 378 KRFGYEEFRNRLS 390 >gi|87199809|ref|YP_497066.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM 12444] gi|87135490|gb|ABD26232.1| carboxynorspermidine decarboxylase [Novosphingobium aromaticivorans DSM 12444] Length = 399 Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats. Identities = 120/382 (31%), Positives = 188/382 (49%), Gaps = 17/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D +L NL +R AG+K+L ALK F+ W + + +Y+DG +S L+ Sbjct: 19 VDSPAFVVDAARLRANLAVLADVRDRAGIKVLAALKAFSMWKVAPIVGRYLDGVCTSGLW 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF-----KDKAQKLHK 116 E +L E + GE Y AYK ++ +L D +IFN+ Q ++F + + Sbjct: 79 EALLAAEHYQGEIATYCAAYKAEDMPEILRLSDHVIFNSPGQYDRFKAEIANARTRGESF 138 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 IGLRINP + + DP P SRLG + + V+GL FH CE F Sbjct: 139 DIGLRINPLHAEGEVPRYDPCAPHSRLGFPVDQLVPEHFEGVSGLHFHTLCEQD-FQPLE 197 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + +E + Q++W++ GGG H T DY D L++ + +IYLEPGEA Sbjct: 198 RTWQALEPRIAPYFGQLKWLNFGGGHHITRADYQRDDLVAFLRDVKARTGCEIYLEPGEA 257 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----------TG 286 + + L TVLD N L I D S H+PD + + G Sbjct: 258 VALDAGILVGTVLDTHWNGMQLAITDISATCHMPDVIEAPYRPAMLGEFPIDEYEDGGEG 317 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 P + G SCLAGD+ G++ P + G R +F D A Y++ + FNG+ +P+I + + Sbjct: 318 PAPVRLGGPSCLAGDVIGDYRLPVPTEPGARFAFLDQAHYSMVKTTTFNGVPLPSIWLWD 377 Query: 347 VD-GTIKAIREFSYNDYYNNLS 367 + ++ +R FSY D+ + LS Sbjct: 378 SETDDLEKVRTFSYEDFRDRLS 399 >gi|77462013|ref|YP_351517.1| putative carboxynorspermidine decarboxylase protein [Rhodobacter sphaeroides 2.4.1] gi|77386431|gb|ABA77616.1| putative carboxynorspermidine decarboxylase protein [Rhodobacter sphaeroides 2.4.1] Length = 365 Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats. Identities = 192/366 (52%), Positives = 258/366 (70%), Gaps = 2/366 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLID +L N+ +R+ +G K LLALKCFA W F+ + +MDGTTSSSL Sbjct: 1 MIQTPYYLIDADRLRQNMAVVDRLRQASGAKALLALKCFATWPAFEHMRDHMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID + D IIFN+V QL +F+++ + GL Sbjct: 61 YELRLGREKFGKETHAYSVAWPDHEIDEAVGYADKIIFNSVGQLARFRNRTGGIA--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LADP RPFSRLGE +KIE+ + +++G+M H NCEN F L Sbjct: 119 RLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNCENADVDLFERQLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE FG + +++W+SLGGGIHFT + YPV RLK F+ + VQ+YLEPGEA +T Sbjct: 179 EIEGRFGAILDRLDWVSLGGGIHFTGEGYPVDRLAARLKAFAAAHGVQVYLEPGEAAITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + TL TVLD+ +N K L IVDSSVEAH+ D L+Y++SA + P+ G ++ MVCG+SCLAG Sbjct: 239 SATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIYRQSAKVEPDAGDHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F +P+++GDR+S D AGY + +KNWFNG+ MP+I ++ DG+++ REF Y Sbjct: 299 DIFGEFRFAQPLQVGDRLSIADAAGYTMVKKNWFNGVKMPSIVIREPDGSLRVAREFGYG 358 Query: 361 DYYNNL 366 DY ++L Sbjct: 359 DYASSL 364 >gi|295104725|emb|CBL02269.1| carboxynorspermidine decarboxylase [Faecalibacterium prausnitzii SL3/3] Length = 403 Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats. Identities = 127/378 (33%), Positives = 190/378 (50%), Gaps = 14/378 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP YL+D+ +L N + L +++ G ++LLA K F+ + ++ L Y+ GT +S LY Sbjct: 24 LPTPCYLLDEAQLRRNGEILLGVQQRTGCRILLAQKAFSNFNVYPVLAPYLAGTEASGLY 83 Query: 62 EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E LG E+ E H + AY+ E + +L D I+FN+ SQL KF A+ K IGL Sbjct: 84 ESRLGREELPEKENHVFCAAYRTDEFEELLQYADHIVFNSPSQLAKFGPAAKAAGKSIGL 143 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173 RINP S + DP P SRLG + + ++GL FH CE Sbjct: 144 RINPECSTQEGHEIYDPCAPGSRLGTTRAQWDAAVAAHPELPALLDGLHFHTLCEQD-AD 202 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + L +EK+F + +++W++ GGG H T Y + + +KY VQ+YLEP Sbjct: 203 ALAVTLAAVEKKFADLLPRMKWLNFGGGHHITRPGYALATLENCILSVRQKYGVQVYLEP 262 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN----TGPY 288 GEA N L TTVLD N + + D S H PD + + + Sbjct: 263 GEAWALNAGYLVTTVLDTLRNGDTSLAILDMSAACHTPDVIEMPYRPPLLDAGEAGEKAH 322 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 T + G +CLAGDI G++ F+ P+ GD++ F D+A Y + N FNG+ +P I + D Sbjct: 323 TVRLGGPTCLAGDIIGDYSFDAPLAEGDKLIFGDMAIYTTCKNNTFNGMPLPPIWLLGAD 382 Query: 349 GTIKAIREFSYNDYYNNL 366 G + + F Y D+ L Sbjct: 383 GNCRELVHFGYQDFKMRL 400 >gi|284049214|ref|YP_003399553.1| Orn/DAP/Arg decarboxylase 2 [Acidaminococcus fermentans DSM 20731] gi|283953435|gb|ADB48238.1| Orn/DAP/Arg decarboxylase 2 [Acidaminococcus fermentans DSM 20731] Length = 404 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 117/376 (31%), Positives = 192/376 (51%), Gaps = 12/376 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++DK L N + ++ G ++LLA K F+ + ++ L Y+ GT +S LY Sbjct: 28 LGTPCYILDKAALRRNGEILKGVQDRTGCRILLAQKAFSNYDLYPVLEPYLAGTEASGLY 87 Query: 62 EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E LG E G E H + AY+ +++ V D I+FN+ QL + A+K K +GL Sbjct: 88 EAKLGREAMPGKEVHVFCGAYRADQMEEVCQVADHIVFNSPRQLKTYGPMAKKAGKSVGL 147 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNV----NGLMFHNNCENKSFLCF 175 RINP S + DP P SR+G ++ +G+ FH CE + Sbjct: 148 RINPECSTQEGHAIYDPCAPGSRMGTTRAQWDAWMTPDLVELLDGIHFHTLCEQDADD-L 206 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 L +E++FG + +++W+++GGG H T Y + + ++ + + V +YLEPGE Sbjct: 207 KKTLDAVEEKFGDVLPKMKWVNMGGGHHITRPGYHIPLLEECIRRAQKAWDVTVYLEPGE 266 Query: 236 AIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTA 290 A N L T VLD+ + I+D+S H+PD L + P T Sbjct: 267 ACALNAGYLATRVLDVVENGDVKIAILDTSAACHMPDVLEMPYRPPLYGAGEPGERAVTW 326 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350 + +CL+GD+ G++ F+ +++GD + F D+A Y + N FNG+ +P I V DG+ Sbjct: 327 RLGSGTCLSGDVAGDYSFDGDLEVGDMLLFGDMAIYTTCKNNTFNGMPLPDIDVLEEDGS 386 Query: 351 IKAIREFSYNDYYNNL 366 +K +++F Y D+ L Sbjct: 387 VKVLKKFGYEDFKMRL 402 >gi|325280295|ref|YP_004252837.1| carboxynorspermidine decarboxylase [Odoribacter splanchnicus DSM 20712] gi|324312104|gb|ADY32657.1| carboxynorspermidine decarboxylase [Odoribacter splanchnicus DSM 20712] Length = 387 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 124/374 (33%), Positives = 198/374 (52%), Gaps = 10/374 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++ + L +NL +RK G ++++ALK A W +F L+++ DG T+SSL Sbjct: 16 VPSPCYVLHETLLADNLRVIDKVRKATGAEIIVALKANAMWSIFPELSRHSDGATASSLA 75 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E++G H Y Y + EI +L+ + I FN++ Q +F +A + GLR Sbjct: 76 EARLVFEEYGAPAHTYAPVYTEGEIGEILNCSNHITFNSLGQYERFGRRAHRAGVSCGLR 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S + L +P P SRLG D + ++GL FH+ CE++ L Sbjct: 136 VNPEFSTVETDLYNPASPTSRLGILAADL-THLPEGIDGLHFHSLCESR-PDDLRGTLAA 193 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 +E+ FG F QI+W+++GGG T KDY ++ L +F +Y +I LEPG A + Sbjct: 194 VEERFGRFFPQIKWLNMGGGHLMTHKDYDEEELIHILCDFRSRYPHLRIILEPGSAFTWD 253 Query: 241 TTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 T L TV D +S + ++++ S H+PD L I P G + G Sbjct: 254 TGCLVATVEDKVSNGGVDTLMLNVSFACHMPDCLEMPYKPAILGTHEPAEGEKRWRMGGN 313 Query: 296 SCLAGDIFGEFHFE--KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 SCLAGD +G++ F+ + ++GDRI F D+ Y + + FNG+ P+I + N + + Sbjct: 314 SCLAGDYYGDWAFDGGREPRVGDRIVFRDMIHYTMVKTTMFNGVTHPSIGIWNPETGFRL 373 Query: 354 IREFSYNDYYNNLS 367 +R+F Y DY N +S Sbjct: 374 VRKFGYEDYKNRMS 387 >gi|310816500|ref|YP_003964464.1| carboxynorspermidine decarboxylase [Ketogulonicigenium vulgare Y25] gi|308755235|gb|ADO43164.1| carboxynorspermidine decarboxylase [Ketogulonicigenium vulgare Y25] Length = 365 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 195/366 (53%), Positives = 252/366 (68%), Gaps = 3/366 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +I+TP+YLID+ KL NL +R +G K LLALKCFA W +FD L + MDGTTSSSL Sbjct: 2 VIETPFYLIDRTKLSRNLQIINRLRDLSGAKTLLALKCFATWPVFDQLAEVMDGTTSSSL 61 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LGHEKFG ETHAY+V + D EID +S D IIFN++ QL +F+ A GL Sbjct: 62 YELRLGHEKFGKETHAYSVGWSDAEIDEAVSYADKIIFNSIGQLTRFE--AASSKVARGL 119 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S S F LADP R FSRLGE DKI + + + G+M H NCEN F F L Sbjct: 120 RLNPRFSTSGFDLADPARAFSRLGEWDVDKIRAVLPLITGVMIHYNCENGDFDLFDRQLT 179 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE EFG + Q++W+SLGGGIHFT + YP++ RLK F+ VQ+YLEPGEA +TN Sbjct: 180 RIEDEFGEILRQLDWVSLGGGIHFTGEGYPLEKLAARLKAFAANMGVQVYLEPGEATITN 239 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 TT+L TVLDI N K+L IVDSSVEAH+ D L+Y+ +A + +G Y + G+SCLAG Sbjct: 240 TTSLEVTVLDILNNGKDLAIVDSSVEAHMLDLLIYRTTAKMET-SGDYPYQIAGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFG+F F KP+++GDR+S D AGY + +KNWFNG+ MP+I ++ +DG++ REF Y Sbjct: 299 DIFGDFTFPKPLQVGDRLSIADAAGYTMVKKNWFNGVKMPSIVIRELDGSMTVAREFGYA 358 Query: 361 DYYNNL 366 DY ++L Sbjct: 359 DYASSL 364 >gi|163761494|ref|ZP_02168567.1| putative carboxynorspermidine decarboxylase protein [Hoeflea phototrophica DFL-43] gi|162281338|gb|EDQ31636.1| putative carboxynorspermidine decarboxylase protein [Hoeflea phototrophica DFL-43] Length = 365 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 210/367 (57%), Positives = 274/367 (74%), Gaps = 2/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M++TPYYL+DK KLL N++ +R+ +G K LLALKCFA WG+FD + YMDGTTSSSL Sbjct: 1 MLQTPYYLVDKSKLLVNMEKIATLRELSGAKALLALKCFATWGVFDFMRDYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV LGH +FG ETHAY+VAY D EID V+S+ D IIFN++ QL +F +Q GL Sbjct: 61 NEVRLGHTRFGKETHAYSVAYADHEIDEVVSHADKIIFNSIGQLTRFG--SQSAGIIRGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP VS S F LADP RPFSRLGE K+E ++ ++G M HNNCEN F F ML Sbjct: 119 RLNPGVSSSTFDLADPARPFSRLGEWDLAKVEPVMELISGFMIHNNCENGDFDLFDKMLG 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +IE++FG + + EW+SLGGGIHFT +DYP++ F +RLK FS + VQ+YLEPGEA +TN Sbjct: 179 DIEQKFGPLLKKAEWVSLGGGIHFTGEDYPLEKFAERLKRFSGDFGVQVYLEPGEAAITN 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL TVLD N K+LV+VDSS+EAH+ D L+Y+ESA ++P+ GP+ MVCG+SCLAG Sbjct: 239 STTLEVTVLDKLYNGKDLVVVDSSIEAHLLDLLIYRESAKVHPDQGPHRYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F + + IGDRIS +D AGY + +KNWFNG+ MP IA++ +DG+++ +REF+Y Sbjct: 299 DIFGEFDFPEELNIGDRISIQDTAGYTMVKKNWFNGVQMPAIAIRELDGSLRTVREFAYA 358 Query: 361 DYYNNLS 367 DY +LS Sbjct: 359 DYEQSLS 365 >gi|288941773|ref|YP_003444013.1| carboxynorspermidine decarboxylase [Allochromatium vinosum DSM 180] gi|288897145|gb|ADC62981.1| carboxynorspermidine decarboxylase [Allochromatium vinosum DSM 180] Length = 368 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 169/367 (46%), Positives = 241/367 (65%), Gaps = 3/367 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TPYYLID+ +L NL+ +R+ +G K +LALKCF+ W +FD + QY+DGTTSSSLY Sbjct: 4 LATPYYLIDESRLQRNLEIIRQVRERSGAKSVLALKCFSTWCVFDLMRQYLDGTTSSSLY 63 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG+E FGGETHAY+V + E+ AV D +IFN++SQL +F +GLR Sbjct: 64 EARLGYETFGGETHAYSVGFSRDEVLAVREFADKLIFNSLSQLRRFHP--DVAGLNLGLR 121 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP +SYS F LADP R +SRLG K + + GLMFH NCEN A L+ Sbjct: 122 VNPGISYSNFDLADPARRYSRLGVSDKAALAEVAPWLKGLMFHFNCENPDVDNIRASLET 181 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 + +E+G + ++EW+SLGGG+ FT Y + FC+ L+ FS + +Q+YLEPGEA VT + Sbjct: 182 LGREYGELLHRMEWVSLGGGLSFTQDGYALDAFCEALRAFSRTFDIQVYLEPGEAAVTQS 241 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY-PNTGPYTAMVCGRSCLAG 300 T L TTVLD+ N ++ I+D+S+EAH+ D+L+Y+ + P G + MV GR+CLAG Sbjct: 242 TELVTTVLDVVHNEVDIAIIDASLEAHMLDHLIYRTHPRLASPPPGEHRMMVAGRTCLAG 301 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 D+FG+F P+++GD + D GY + + NWFNG+ MP I V+ +DGT++ +R F Y+ Sbjct: 302 DVFGDFKLAAPLQVGDEVRIADAGGYTMVKVNWFNGVAMPAIVVRRLDGTLERVRSFGYD 361 Query: 361 DYYNNLS 367 D+ +LS Sbjct: 362 DFKRSLS 368 >gi|84515479|ref|ZP_01002841.1| NspC, carboxynorspermidine decarboxylase [Loktanella vestfoldensis SKA53] gi|84510762|gb|EAQ07217.1| NspC, carboxynorspermidine decarboxylase [Loktanella vestfoldensis SKA53] Length = 364 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 215/366 (58%), Positives = 269/366 (73%), Gaps = 2/366 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPYYLIDK LL NL+ ++R+ +GVK LLALKCFA W +FD + ++MDG+TSSSLY Sbjct: 1 MQTPYYLIDKSCLLRNLEKISWLREASGVKCLLALKCFATWSVFDFMAEHMDGSTSSSLY 60 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG EKF GETHAY+VAY D EI VL+ D IIFN++ QL KF D +Q GLR Sbjct: 61 EVRLGREKFPGETHAYSVAYADHEIAQVLAYSDKIIFNSIGQLAKFNDASQGHV--RGLR 118 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS S+F LADP RPFSRLGE KI + ++GLMFHNNCEN SF F ML Sbjct: 119 VNPGVSTSEFDLADPARPFSRLGEHDPAKIAAVADQISGLMFHNNCENDSFARFDEMLTL 178 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG I ++ WISLGGGIHFT DYP+++ RLKEFS+K+ VQ+YLEPGEA +T Sbjct: 179 IEDRFGAIIHKMAWISLGGGIHFTGADYPLENLALRLKEFSQKFGVQVYLEPGEAAITGA 238 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 TL TVLD N KNL IVDSS+EAH+ D L+Y+E A I PNTG + M+CG+SCLAGD Sbjct: 239 ATLEVTVLDTMHNGKNLAIVDSSIEAHLLDLLIYREPAKIAPNTGAHEWMICGKSCLAGD 298 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 IFGEF F+ P+K GDR+SF+D AGY + +KNWFNG+ MP+IA++ +DGT + +R+F Y+D Sbjct: 299 IFGEFLFDAPLKAGDRLSFQDTAGYTMVKKNWFNGVKMPSIAIRELDGTTRLVRDFDYDD 358 Query: 362 YYNNLS 367 + LS Sbjct: 359 FAAALS 364 >gi|126460903|ref|YP_001042017.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides ATCC 17029] gi|126102567|gb|ABN75245.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides ATCC 17029] Length = 365 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 192/366 (52%), Positives = 258/366 (70%), Gaps = 2/366 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLID +L N+ +R+ +G K LLALKCFA W F+ + +MDGTTSSSL Sbjct: 1 MIQTPYYLIDADRLRQNMAVVDRLRQASGAKALLALKCFATWPAFEHMRDHMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID + D IIFN+V QL +F+++ + GL Sbjct: 61 YELRLGREKFGKETHAYSVAWPDHEIDEAVGYADKIIFNSVGQLARFRNRTGGIA--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LADP RPFSRLGE +KIE+ + +++G+M H NCEN F L Sbjct: 119 RLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNCENADVDLFDRQLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE FG + +++W+SLGGGIHFT + YPV RLK F+ + VQ+YLEPGEA +T Sbjct: 179 EIEGRFGAILDRLDWVSLGGGIHFTGEGYPVDRLAARLKAFAAAHGVQVYLEPGEAAITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + TL TVLD+ +N K L IVDSSVEAH+ D L+Y++SA + P+ G ++ MVCG+SCLAG Sbjct: 239 SATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIYRQSAKVEPDAGDHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F +P+++GDR+S D AGY + +KNWFNG+ MP+I ++ DG+++ REF Y Sbjct: 299 DIFGEFRFAQPLQVGDRLSIADAAGYTMVKKNWFNGVKMPSIVIREPDGSLRVAREFGYG 358 Query: 361 DYYNNL 366 DY ++L Sbjct: 359 DYASSL 364 >gi|221640964|ref|YP_002527226.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides KD131] gi|221161745|gb|ACM02725.1| Carboxynorspermidine decarboxylase [Rhodobacter sphaeroides KD131] Length = 365 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 193/366 (52%), Positives = 258/366 (70%), Gaps = 2/366 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI+TPYYLID +L N+ +R+ +G K LLALKCFA W F+ + +MDGTTSSSL Sbjct: 1 MIQTPYYLIDADRLRQNMAVVDRLRQASGAKALLALKCFATWPAFEHMRDHMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 YE+ LG EKFG ETHAY+VA+ D EID + D IIFN+V QL +F+D+ + GL Sbjct: 61 YELRLGREKFGKETHAYSVAWPDHEIDEAVGYADKIIFNSVGQLARFRDRTGDIA--RGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP +S S F LADP RPFSRLGE +KIE+ + +++G+M H NCEN F L Sbjct: 119 RLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNCENADVDLFDRQLS 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE FG + +++W+SLGGGIHFT + YPV RLK F+ + VQ+YLEPGEA +T Sbjct: 179 EIEGRFGAILDRLDWVSLGGGIHFTGEGYPVDRLAARLKAFAAAHGVQVYLEPGEAAITR 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 + TL TVLD+ +N K L IVDSSVEAH+ D L+Y++SA + P+ G ++ MVCG+SCLAG Sbjct: 239 SATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIYRQSAKVEPDAGDHSYMVCGKSCLAG 298 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGEF F +P+++GDR+S D AGY + +KNWFNG+ MP+I ++ DG+++ REF Y Sbjct: 299 DIFGEFRFAQPLQVGDRLSIADAAGYTMVKKNWFNGVKMPSIVIREPDGSLRVAREFGYG 358 Query: 361 DYYNNL 366 DY ++L Sbjct: 359 DYASSL 364 >gi|218130916|ref|ZP_03459720.1| hypothetical protein BACEGG_02511 [Bacteroides eggerthii DSM 20697] gi|217987260|gb|EEC53591.1| hypothetical protein BACEGG_02511 [Bacteroides eggerthii DSM 20697] Length = 381 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 118/373 (31%), Positives = 196/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL+ + AGV+++LA K FA W F +Y++ +T+SS+YE Sbjct: 10 PSPCYIMEEELLRKNLELIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120 L E+FG + H Y+ AY + ++ I FN+++Q +F A G+ Sbjct: 70 ARLALEEFGSKAHTYSPAYTEAGFPEIMRCSSHITFNSLAQFRRFYPMIQADGQGISCGI 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G + + + ++G H +CE+ S+ L+ Sbjct: 130 RVNPEYSEVETELYNPCAPGTRFGVMAEQLSDVLPQGIDGFHCHCHCESSSYE-LERTLE 188 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E +F + Q++W++LGGG T KDY V+ + L+ E+Y +I LEPG A Sbjct: 189 HLEAKFSRWFPQLKWLNLGGGHLMTRKDYDVEHLIRLLRGLKERYPHLRIILEPGSAFTW 248 Query: 240 NTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCG 294 T L + V+D + I++ S H+PD L + GPY + G Sbjct: 249 QTGVLTSEVVDLVENRGIRTAILNVSFTCHMPDCLEMPYQPVVRGAEMGNDGPYVYRLGG 308 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ PTIA+ +G Sbjct: 309 NSCLSGDYMGMWSFDHELQIGERIIFEDMIHYTMVKTNMFNGIHHPTIAMWTKEGKADLF 368 Query: 355 REFSYNDYYNNLS 367 ++FSY DY + +S Sbjct: 369 KQFSYEDYRDRMS 381 >gi|124516709|gb|EAY58217.1| Diaminopimelate decarboxylase [Leptospirillum rubarum] Length = 414 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 59/385 (15%), Positives = 118/385 (30%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ ++ L + + + A+K + L + G S Sbjct: 25 VDSPVYIYSEKALREAYSSYQQAFQGHRTLIAYAMKANGNLQILSMLGKMGSGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E+ + + K +A+ + + +L++ A + K Sbjct: 85 ELFRARRAGIPSDRIVFAGVGKTDGEMREAIDAGILMFNVESSMELDRLSRVASSMGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC-- 167 + LR+NP V S+ G +E + + G+ H Sbjct: 145 PVALRVNPDVDPKTHPYISTGMKKSKFGIPVDQALEEYRRAARLPGIRIVGIHQHIGSQL 204 Query: 168 -ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223 E F + + ++ W+ +GGG+ + ++ + E Sbjct: 205 TEISPFRDAFDRMVAFARLLKENGIEVTWLDVGGGLGIRYGNEKPPTPREVAHEILSRLE 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES---A 279 +V I LEPG +IV N L T V + E + + D+ + + L Sbjct: 265 GLNVGIILEPGRSIVGNAGILVTEVQYLKETSVKMFYIADAGMNDLIRPSLYGAFHDLWP 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C GD + P + GD ++ Y + +N Sbjct: 325 VVKKTGAGKKGDLVGPVCETGDFLVQDRELPPAEPGDLLAVMSAGAYGFAMASNYNARPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P + + D +Y D Sbjct: 385 PAEVLVSGDRFSVIRARETYEDLIR 409 >gi|298528736|ref|ZP_07016140.1| diaminopimelate decarboxylase [Desulfonatronospira thiodismutans ASO3-1] gi|298512388|gb|EFI36290.1| diaminopimelate decarboxylase [Desulfonatronospira thiodismutans ASO3-1] Length = 415 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 76/384 (19%), Positives = 130/384 (33%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + ++K + + L Q G S E Sbjct: 26 DTPLYVYSAKTLRRHYEAFDSAFEGTRHMTCFSVKANSNICVLKLLGQMGAGVDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNV-AYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + Y+ ++ EI L SN + +L + A ++ + Sbjct: 86 LFRALKAGIDPQKIVYSGVGKREHEIREALLSNILMFNVESRQELERINQVASEMEVQAR 145 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-----KNVN--GLMFHNNCENK 170 LRINP V ++ G + + ES N+ G+ H + Sbjct: 146 ISLRINPDVDPQTHPYISTGLKKNKFGLELEQAWESYKLARELSNIEPVGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEK 224 S F L+ I+ +G I+++ LGGG+ T + +KE + Sbjct: 206 SVEPFLEALERIKSFYGRLQELGLDIKYLDLGGGLGITYDQEEPPHPAEFGRAVKESLKD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + LEPG I N + T VL KN VIVD+++ + L Sbjct: 266 TDLTLILEPGRVIAGNAGIMVTRVLYTKGTPSKNFVIVDAAMNDLMRPSLYGSYHRIEPV 325 Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 YTA V G C GD + ++ D ++ Y + +N P Sbjct: 326 QEKSGRLYTADVVGPICETGDFLAQGRELPRLEQDDLLAVHSAGAYGFTMASQYNSRPRP 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + A R Y D Sbjct: 386 AEVLVDNDQAVLARRREVYFDLLQ 409 >gi|154174242|ref|YP_001408907.1| carboxynorspermidine decarboxylase [Campylobacter curvus 525.92] gi|153793066|gb|EAT99910.2| carboxynorspermidine decarboxylase [Campylobacter curvus 525.92] Length = 380 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 146/373 (39%), Positives = 218/373 (58%), Gaps = 10/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IKTP Y+ ++ KL NL+ +++ +G K+L+ALK FA G+ D +++Y+DG T+S LY Sbjct: 8 IKTPAYVCEEAKLRANLELLKHVKDESGAKILVALKGFALSGVMDMISRYLDGATASGLY 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + GE H Y+ A+KD EID +LS I+FN+++Q KFKDKA GLR Sbjct: 68 EAKFAKDFIKGEIHTYSPAFKDEEIDEILSLSKHIVFNSLNQWRKFKDKALASGISCGLR 127 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S S +P FSRLG + + + GL FH CE +S +L Sbjct: 128 INPESSASPTDAYNPCARFSRLGITRANLDKFDSLDGIEGLHFHALCE-ESAESLETVLM 186 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 + E++FG I++++WI+ GGG H T DY V+ +K F ++Y V++YLEPGEA+ Sbjct: 187 SFEEKFGSEISKMKWINFGGGHHITRADYNVQLLINLIKNFRDRYGVEVYLEPGEAVGWQ 246 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCL 298 T L +VLDI EN KN+ I+D+S EAH+PD +L + +G ++ G +CL Sbjct: 247 TGFLIASVLDIVENEKNIAILDTSAEAHMPDTILMPYRPAVRGESRSGKFSYRFGGNTCL 306 Query: 299 AGDIFG------EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 AGDI G ++ F +P+KIGD++ FED Y I + FNGI +P + + +G I+ Sbjct: 307 AGDIVGQDAGNADYKFNEPLKIGDKVIFEDQIHYTIVKNTTFNGIKLPDLLLLKENGEIE 366 Query: 353 AIREFSYNDYYNN 365 +R+F Y++Y Sbjct: 367 ILRKFGYDEYKRR 379 >gi|329895585|ref|ZP_08271081.1| Carboxynorspermidine decarboxylase, putative [gamma proteobacterium IMCC3088] gi|328922264|gb|EGG29614.1| Carboxynorspermidine decarboxylase, putative [gamma proteobacterium IMCC3088] Length = 387 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 126/376 (33%), Positives = 201/376 (53%), Gaps = 11/376 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ + NLD + +G K+L ALK F+ + + + GT SS L+ Sbjct: 13 LPSPCWVVDEVAVQRNLDILHEVGAKSGAKVLAALKAFSMFELAPLYKNRVWGTCSSGLH 72 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-----AQKLHK 116 E +L E + GE H ++ AY +++ +L D ++FN+V Q +FK A++ H Sbjct: 73 EALLAKEFYPGEVHVFSAAYSQADLEKILEIADHVVFNSVQQWRRFKPLCQAAQARRTHL 132 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 GLR+NP S L DP P SRLG + + ++GL FH CE F + Sbjct: 133 SFGLRVNPEHSEGDVPLYDPCAPGSRLGIPRSQLQIEDFEGISGLHFHTLCE-HPFEPLA 191 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + +E+ FG ++ + W++ GGG H T + Y ++ FS KY VQ+YLEPGEA Sbjct: 192 RTVAALEERFGDILSGLNWVNFGGGHHITAEGYDRDGLIALIQSFSAKYQVQVYLEPGEA 251 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMV 292 + T L + VLD++ + I+D+S H+PD L A I N YT + Sbjct: 252 VAIGTGVLVSEVLDVTYTDRPQAILDTSATCHMPDTLEMPYRALISGAGEANELSYTYRL 311 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTI 351 G +CLAGD+ G++ F P+ +G R+ FED++ Y + + + FNG +P IAV N D + Sbjct: 312 GGLTCLAGDVMGDYSFAAPLDVGQRLMFEDMSHYTMVKTSTFNGTKLPAIAVWNSDTNAV 371 Query: 352 KAIREFSYNDYYNNLS 367 + +R F Y+D+ + LS Sbjct: 372 RIVRRFEYHDFRDRLS 387 >gi|57506771|dbj|BAD86639.1| putative carboxynorspermidine decarboxylase [Selenomonas ruminantium] Length = 391 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 136/385 (35%), Positives = 211/385 (54%), Gaps = 20/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D+Q L NNL ++ AG K+LLA KCF+ + + + +Y+DG T+S LY Sbjct: 8 VPTPAYVVDEQALENNLQILQEVKAAAGCKILLAQKCFSMFAEYPLIGKYLDGATASGLY 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------QKLH 115 E LGHE+ GE H ++ AY+ EI+ + CD +IFN+ SQL +F K + + Sbjct: 68 EARLGHEEMEGENHVFSPAYRPEEIEEIAGICDHVIFNSFSQLRRFGAKVKAIQQKRGVQ 127 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCEN 169 IGLRINP S + DP SRLG +D + ++GL FH CE Sbjct: 128 HGIGLRINPECSTQDHAIYDPCAAGSRLGVTAEDFAKMAAVEPELFALLDGLHFHTLCEQ 187 Query: 170 KSFLCFSAMLKNIEKEFGHFITQ--IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 S L+ +E++FG ++ Q I W+++GGG H T DY + ++ EKY V Sbjct: 188 NSDALAE-TLQAVEQKFGRWLEQDSIHWLNMGGGHHITRADYDRQLLIDLVQSVREKYGV 246 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN-- 284 ++YLEPGEA+ N L T VLD ++ + +++++D+S H+PD L + + Sbjct: 247 EVYLEPGEAVALNAGYLVTEVLDTVTNHGTHILLLDASAACHMPDVLEMPYRPPLKDSGE 306 Query: 285 --TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 Y + +CLAGDI G++ F++ + GDR+ FED+A Y++ + N FNG+ +P I Sbjct: 307 AGEKAYNYRLSSCTCLAGDIIGDYSFDREILPGDRLYFEDMAIYSMVKNNTFNGMALPAI 366 Query: 343 AVKNVDGTIKAIREFSYNDYYNNLS 367 N G +++F Y D+ LS Sbjct: 367 WKMNAAGDCTLVKKFGYKDFKERLS 391 >gi|238925685|ref|YP_002939202.1| carboxynorspermidine decarboxylase [Eubacterium rectale ATCC 33656] gi|238877361|gb|ACR77068.1| carboxynorspermidine decarboxylase [Eubacterium rectale ATCC 33656] Length = 395 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 136/379 (35%), Positives = 210/379 (55%), Gaps = 14/379 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP Y+ID+ KL NL + + G ++LLA K F+A+ + + +Y+ GTT+S L+ Sbjct: 18 LRTPCYVIDEGKLTENLLILNGVMQRTGARILLAQKAFSAFYEYPLIGRYLSGTTASGLF 77 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--G 119 E L HE+ G E H + A+ E+D ++ CD I+FN+VSQ +DK +K KKI G Sbjct: 78 EARLAHEEMGKENHVFCPAFLPQEMDELVEICDHIVFNSVSQYLLHRDKIEKADKKISVG 137 Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLMFHNNCENKSFL 173 LRINP S + DP P SRLG + ++ + G FH CE S Sbjct: 138 LRINPECSTQEGHEIYDPCAPGSRLGITREALDKAIKNGLDLSRIEGFHFHTLCEQDS-D 196 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 L +E++FG + ++W+++GGG H T DY ++ + + +KY ++IYLEP Sbjct: 197 ALETTLAAVEEKFGDLLYGLKWLNMGGGHHITRADYDIERLEKCIMHMRDKYDLEIYLEP 256 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN----TGPY 288 GEA+ + L TTVLDI EN +++ D+S H+PD L + + Y Sbjct: 257 GEAVALDAGYLETTVLDIVENNGIKILILDTSAACHMPDVLEMPYRPPLMDSGEPGEKKY 316 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 T + +CLAGD+ G++ F++ +K GDR+ F D+A Y++ + N FNG+ +P IAV + + Sbjct: 317 TYRLSSCTCLAGDVIGDYSFDREIKTGDRLCFCDMAIYSMVKNNTFNGMPLPDIAVMDEN 376 Query: 349 GTIKAIREFSYNDYYNNLS 367 K IR F Y D+ LS Sbjct: 377 NDCKVIRRFEYEDFKCRLS 395 >gi|291527854|emb|CBK93440.1| carboxynorspermidine decarboxylase [Eubacterium rectale M104/1] Length = 383 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 135/379 (35%), Positives = 210/379 (55%), Gaps = 14/379 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP Y+ID+ KL NL + + G ++LLA K F+A+ + + +Y+ GTT+S L+ Sbjct: 6 LRTPCYVIDEGKLTENLLILNGVMQRTGARILLAQKAFSAFYEYPLIGRYLSGTTASGLF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--G 119 E L HE+ G E H + A+ E+D ++ CD I+FN++SQ +DK +K HKKI G Sbjct: 66 EARLAHEEMGKENHVFCPAFLPQEMDELVEICDHIVFNSISQYLLHRDKIEKAHKKISVG 125 Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLMFHNNCENKSFL 173 LRINP S + DP P SRLG + ++ + G FH CE S Sbjct: 126 LRINPECSTQEGHEIYDPCAPGSRLGITREALDKAIKNGLDLSRIEGFHFHTLCEQDS-D 184 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 L +E++F + ++W+++GGG H T DY ++ + + +KY ++IYLEP Sbjct: 185 ALETTLAAVEEKFADLLYGLKWLNMGGGHHITRADYDIERLEKCIMHMRDKYDLEIYLEP 244 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN----TGPY 288 GEA+ + L TTVLDI EN +++ D+S H+PD L + + Y Sbjct: 245 GEAVALDAGYLETTVLDIVENNGIKILILDTSAACHMPDVLEMPYRPPLMDSGEPGEKKY 304 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 T + +CLAGD+ G++ F++ +K GDR+ F D+A Y++ + N FNG+ +P IAV + + Sbjct: 305 TYRLSSCTCLAGDVIGDYSFDREIKTGDRLCFCDMAIYSMVKNNTFNGMPLPDIAVMDEN 364 Query: 349 GTIKAIREFSYNDYYNNLS 367 K IR F Y D+ LS Sbjct: 365 NDCKVIRRFEYEDFKCRLS 383 >gi|85703337|ref|ZP_01034441.1| putative carboxynorspermidine decarboxylase protein [Roseovarius sp. 217] gi|85672265|gb|EAQ27122.1| putative carboxynorspermidine decarboxylase protein [Roseovarius sp. 217] Length = 364 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 203/367 (55%), Positives = 254/367 (69%), Gaps = 3/367 (0%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 MI TPYYLID+Q+LL N+ +R +G K LLALKCFA W F T+ YMDGTTSSSL Sbjct: 1 MIPTPYYLIDEQRLLQNMHKIERLRALSGAKALLALKCFATWSAFPTMQPYMDGTTSSSL 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +E+ LG EKFG ETHAY+VA+ D EID +S D IIFNTV QL ++ +Q + GL Sbjct: 61 FELRLGREKFGKETHAYSVAWSDAEIDDAVSYADKIIFNTVGQLTRYD--SQSAGIERGL 118 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S S F LADP RPFSRLGE DKI I ++G+M H NCEN F F L Sbjct: 119 RLNPRFSTSSFDLADPARPFSRLGEWDVDKILGVIDRISGVMIHYNCENSDFDLFDQQLA 178 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 IE EF + +++W+SLGGGIHFT DYP++ RLK F+E++ VQ+YLEPGEA +T Sbjct: 179 RIEAEFAPVLERLQWVSLGGGIHFTGDDYPLEKLAARLKGFAERFGVQVYLEPGEAAITG 238 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +TTL TVLD+ +N K+L IVDSS EAH+ D L+Y+ESA P G + +CG+SCLAG Sbjct: 239 STTLEVTVLDLLDNGKDLAIVDSSTEAHMLDLLIYRESAK-LPQEGSHAYEICGKSCLAG 297 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 DIFGE F P+ IGDRIS D AGY + +KNWFNG+NMP IA++ DGT+ IR F++ Sbjct: 298 DIFGEARFAAPLSIGDRISIADTAGYTMVKKNWFNGVNMPAIAIRRPDGTVDLIRSFTFE 357 Query: 361 DYYNNLS 367 DY +LS Sbjct: 358 DYAASLS 364 >gi|311693138|gb|ADP96011.1| diaminopimelate decarboxylase [marine bacterium HP15] Length = 416 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 63/382 (16%), Positives = 121/382 (31%), Gaps = 24/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + ++ + A+K + + + L + G S E Sbjct: 26 GTPAYVYSRATLERHYRAYDDALRDHPHLVCYAVKANSNLAVLNVLARLGAGFDIVSAGE 85 Query: 63 VMLG-HEKFGGETHAYNV-AYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ ++ E+ A+ + ++L++ A +L Sbjct: 86 LERVLRAGGDPSRVVFSGVGKQEWEMKRALEVGVRCFNVESDTELDRLNAVAGELGVKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 I LR+NP V ++ G + +V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIDIAEASQVYARAAGMPNLDVKGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224 S F L + I + +GGG+ T +K E Sbjct: 206 SVSPFLDALDRVLALIDSLADQGIHIHHLDMGGGLGVTYNQEQPPQPSDYVKALAERLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG +I N L T V + I+D+++ + L A I Sbjct: 266 RKLELILEPGRSIAANAGILVTRVEFLKCTEHRNFAIIDAAMNDLIRPALYSAWQAIIPV 325 Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G C GD G+ + ++ GD ++ Y + +N N Sbjct: 326 KPHQDGEEKAWDLVGPVCETGDFLGKDRHLR-LQAGDLLAVRSAGAYGFVMSSNYNTRNR 384 Query: 340 PTIAVKNVDGTIKAIREFSYND 361 P + + D R + D Sbjct: 385 PPELMVDGDQVHVVRRRETLED 406 >gi|291524108|emb|CBK89695.1| carboxynorspermidine decarboxylase [Eubacterium rectale DSM 17629] Length = 383 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 136/379 (35%), Positives = 209/379 (55%), Gaps = 14/379 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP Y+ID+ KL NL + + G ++LLA K F+A+ + + +Y+ GTT+S L+ Sbjct: 6 LRTPCYVIDEGKLTENLLILNGVMRRTGARILLAQKAFSAFYEYPLIGRYLSGTTASGLF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--G 119 E L HE+ G E H + A+ E+D ++ CD I+FN+VSQ +DK +K KKI G Sbjct: 66 EARLAHEEMGKENHVFCPAFLPQEMDELVEICDHIVFNSVSQYLLHRDKIEKADKKISVG 125 Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLMFHNNCENKSFL 173 LRINP S + DP P SRLG ++ + G FH CE S Sbjct: 126 LRINPECSTQEGHEIYDPCAPGSRLGITRDALDKAIKNGLDLSRIEGFHFHTLCEQDS-D 184 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 L +E++FG + ++W+++GGG H T DY ++ + + +KY ++IYLEP Sbjct: 185 ALETTLAAVEEKFGDLLYGLKWLNMGGGHHITRADYDIERLEKCIMHMRDKYDLEIYLEP 244 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN----TGPY 288 GEA+ + L TTVLDI EN +++ D+S H+PD L + + Y Sbjct: 245 GEAVALDAGYLETTVLDIVENNGIKILILDTSAACHMPDVLEMPYRPPLMDSGEPGEKKY 304 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 T + +CLAGD+ G++ F++ +K GDR+ F D+A Y++ + N FNG+ +P IAV + + Sbjct: 305 TYRLSSCTCLAGDVIGDYSFDREIKTGDRLCFCDMAIYSMVKNNTFNGMPLPDIAVMDEN 364 Query: 349 GTIKAIREFSYNDYYNNLS 367 K IR F Y D+ LS Sbjct: 365 NDCKVIRRFEYEDFKCRLS 383 >gi|237752603|ref|ZP_04583083.1| carboxynorspermidine decarboxylase [Helicobacter winghamensis ATCC BAA-430] gi|229376092|gb|EEO26183.1| carboxynorspermidine decarboxylase [Helicobacter winghamensis ATCC BAA-430] Length = 405 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 138/396 (34%), Positives = 209/396 (52%), Gaps = 31/396 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+++++K NL ++K +G K+LLALK +A W FD QY+ G T+S +Y Sbjct: 11 IPSPCYVLEEEKFEKNLQLLDSVQKRSGAKILLALKGYALWRSFDLAKQYLSGVTASGIY 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK----- 116 E LG+E+FG E ++ +YK E+ ++ + IIFN+ Q FKD + Sbjct: 71 EARLGYEEFGKEVTVFSPSYKLEEMRELVQISNHIIFNSFIQWQTFKDLIDTQNSLRERK 130 Query: 117 -----KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNC 167 ++GLR+NP S + +P SRLG K+ + ++GL FH +C Sbjct: 131 GLAKIEVGLRVNPKYSEVTPAIYNPCVEGSRLGITPKEFKKGIKKYGLDGISGLHFHTHC 190 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 E S LK+ EK FG I Q+ WI+ GGG H T KDY V + +K+F +KY Sbjct: 191 EQNSDALKRT-LKHFEKHFGEIIPQMRWINFGGGHHITRKDYDVDLLVKIIKDFKKKYKT 249 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN--- 284 ++YLEPGEA+ L +V+DI +N ++ I+D S AH+PD L + + Sbjct: 250 EVYLEPGEAVGWQCGFLLGSVIDIVKNGIDIAILDVSAAAHMPDCLEMPYRPNVRNSYLA 309 Query: 285 -------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 Y+ G +CLAGD+ G++ F+ P+KIGDRI FED+ Y I + Sbjct: 310 KAHFKNEKLRLKGEKSYSYRFGGPTCLAGDVIGDYSFKAPLKIGDRIIFEDMVHYTIVKN 369 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 N FNGI +P+I V +G+ + + + Y DY + S Sbjct: 370 NTFNGIPLPSIGVIRKNGSFELFKTYGYEDYKHRNS 405 >gi|223038998|ref|ZP_03609289.1| carboxynorspermidine decarboxylase [Campylobacter rectus RM3267] gi|222879637|gb|EEF14727.1| carboxynorspermidine decarboxylase [Campylobacter rectus RM3267] Length = 379 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 132/372 (35%), Positives = 205/372 (55%), Gaps = 9/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IKTP Y+ ++ K+ NL+ ++ +G K+L+ALK FA G+ + +Y+DG T S LY Sbjct: 8 IKTPAYVCEEAKVRKNLEILKRVKDESGAKVLVALKGFAFSGVMGLVGEYLDGATCSGLY 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + GE H Y+ A+KD +ID VL+ ++FN+ +Q KFK KA GLR Sbjct: 68 EAKFAAKYARGEIHTYSPAFKDEDIDEVLALSRHVVFNSFAQWAKFKQKALAAGVTCGLR 127 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP +S + +P +SRLG + ++ + GL FH CE +S +L Sbjct: 128 VNPELSVAPTDAYNPCGRYSRLGITRANFDADALEGITGLHFHALCE-ESAQSLETVLMA 186 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG FI +++W++ GGG H T + Y V +K F KY V++Y+EPGEA+ T Sbjct: 187 FEEKFGEFIPRMKWVNFGGGHHVTKEGYDVDLLINLIKNFRAKYGVEVYIEPGEAVGWQT 246 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT--GPYTAMVCGRSCLA 299 L +VLD +N K + I+D S EAH+PD +L + + G ++ G +CLA Sbjct: 247 GFLAASVLDFVQNEKTIAILDVSAEAHMPDTVLMPYRPAVRGESKGGKFSYRFGGNTCLA 306 Query: 300 GDIFG------EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 GDI G E+ F+ P+ +GD++ FED Y I + FNGI +P + + +G + Sbjct: 307 GDIVGLDAGEPEYKFDAPLSVGDKVIFEDQIHYTIVKNTTFNGIKLPDLLLLKENGELVT 366 Query: 354 IREFSYNDYYNN 365 +REF + +Y Sbjct: 367 VREFGFEEYERR 378 >gi|294011711|ref|YP_003545171.1| putative diaminopimelate decarboxylase [Sphingobium japonicum UT26S] gi|292675041|dbj|BAI96559.1| putative diaminopimelate decarboxylase [Sphingobium japonicum UT26S] Length = 390 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 113/373 (30%), Positives = 183/373 (49%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ + NL I AG+K+L ALK F+ W + + +Y+DG +S +Y Sbjct: 19 VPSPAFVVDEAAVRRNLSVLRDIGDRAGIKVLGALKAFSMWSLGPVIAEYLDGVCASGIY 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---- 117 E L HE++ GE Y AYK ++ +L D +IFN+ Q+ + + + Sbjct: 79 EARLAHEEYRGEIATYCAAYKAEDLAEILKISDHVIFNSPGQIARLRPVIENARNNGVNF 138 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 IGLRINP + + DP++P SRLG + V+GL HN CE Sbjct: 139 DIGLRINPLHAEGEVPKYDPSQPHSRLGFPIDQLRPEHLAGVDGLHVHNLCEQDFLPLER 198 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + H ++W++ GGG H T DY L+ + +++Y+EPGEA Sbjct: 199 TWAAIESRVMPHVG-GLKWLNFGGGHHVTRADYQTDLLIAFLQRIKARTGLELYIEPGEA 257 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMVCGR 295 + + L +LD+ +N + I D S H+PD + + + G Sbjct: 258 MALDAGILIGEILDVIDNGMPVAITDISATCHMPDVIEAPYRPAMLHEEMEGQPTRLGGP 317 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354 SCLAGDI G++ G RI+F D A Y++ + N FNG+ +P+I + N + ++ I Sbjct: 318 SCLAGDIIGDYRVPGGATPGRRIAFLDQAHYSMVKTNTFNGVPLPSIWLWNSETDELQQI 377 Query: 355 REFSYNDYYNNLS 367 R+FSY D+ + LS Sbjct: 378 RQFSYEDFKSRLS 390 >gi|317050250|ref|YP_004111366.1| diaminopimelate decarboxylase [Desulfurispirillum indicum S5] gi|316945334|gb|ADU64810.1| diaminopimelate decarboxylase [Desulfurispirillum indicum S5] Length = 414 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 122/385 (31%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ ++ L + N + A+K + + L + G S Sbjct: 25 VGTPVYVYSQRTLERHAQVFTQAFANLNAMICFAVKSNSNIHILRVLAEQGIGADIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK- 117 E+ E + D A+ + ++ +L+ + A++L+K Sbjct: 85 ELYRALKAGIPREKILFAGVGKKADEMEYALSEDIFMFNVESMEELDLLQATAKRLNKTA 144 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169 + LR+NP V ++ G + +ES V G+ H + Sbjct: 145 SVALRVNPDVDARTHPYISTGLKENKFGIPMESALESYRYAHSLSCIRVRGIHCHIGSQL 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF---CQRLKEFSE 223 + F I+ IE+I +GGG+ T + + Sbjct: 205 TAIEPFVDAFVIIKNLVRELLSENIPIEYIDMGGGLGITYDQEKPPLPTELAAAIAPHLK 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 + ++ LEPG AI NT T VL +N IVD ++ L Sbjct: 265 EVPCRLILEPGRAIAGNTGAFLTRVLFTKDNGSRKFLIVDGAMNDLARPSLYGSFHDIRP 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C +GD F + P GD +S Y + +N Sbjct: 325 AVVREGNTEVVDIVGPVCESGDFFAKNRPLPPCHPGDILSLMSAGAYGFTMSSNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + +Y D Sbjct: 385 AAEVLVSGDRYRVIRQRETYEDLTR 409 >gi|224539564|ref|ZP_03680103.1| hypothetical protein BACCELL_04469 [Bacteroides cellulosilyticus DSM 14838] gi|224518820|gb|EEF87925.1| hypothetical protein BACCELL_04469 [Bacteroides cellulosilyticus DSM 14838] Length = 386 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 121/374 (32%), Positives = 194/374 (51%), Gaps = 10/374 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D++ L NL + AGV+++LA K FA W F +Y++ +T+SS+YE Sbjct: 14 PSPCYIMDEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIEHSTASSVYE 73 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++SQ +F + K G+ Sbjct: 74 ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFCRFYPEVVKEGSGISCGI 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 RINP S + L +P P +R G E + + G H +CE+ S+ LK Sbjct: 134 RINPEYSEVETELYNPCAPGTRFGMTADLLTEVLPQGIEGFHCHCHCESSSYE-LERTLK 192 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E++F + QI+W++LGGG T KDY V+ Q LK+ +Y +I LEPG A Sbjct: 193 HLEEKFSRWFPQIKWLNLGGGHLMTRKDYDVEHLIQLLKDLRARYPHLRIILEPGSAFTW 252 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT-----GPYTAMVC 293 T L + V+DI + + + S H+PD L + G + + Sbjct: 253 QTGVLVSEVVDIVVSRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAEIGNNGGCHVYRLG 312 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G SCL+GD G++ F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ + Sbjct: 313 GNSCLSGDYMGDWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAMWTKERKADI 372 Query: 354 IREFSYNDYYNNLS 367 ++FSY DY + +S Sbjct: 373 FKQFSYEDYRDRMS 386 >gi|160943877|ref|ZP_02091107.1| hypothetical protein FAEPRAM212_01376 [Faecalibacterium prausnitzii M21/2] gi|158444553|gb|EDP21557.1| hypothetical protein FAEPRAM212_01376 [Faecalibacterium prausnitzii M21/2] Length = 403 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 127/378 (33%), Positives = 189/378 (50%), Gaps = 14/378 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP YL+D+ +L N + L +++ G ++LLA K F+ + ++ L Y+ GT +S LY Sbjct: 24 LPTPCYLLDEAQLRRNGEILLGVQQRTGCRILLAQKAFSNFNVYPVLAPYLAGTEASGLY 83 Query: 62 EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E LG E+ E H + AY+ E + +L D I+FN+ SQL KF A+ K IGL Sbjct: 84 ESRLGREELPEKENHVFCAAYRTDEFEELLQYADHIVFNSPSQLAKFGPAAKAAGKSIGL 143 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173 RINP S + DP P SRLG + + ++GL FH CE Sbjct: 144 RINPECSTQEGHEIYDPCAPGSRLGTTRAQWDAAVAAHPELPALLDGLHFHTLCEQD-AD 202 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + L +EK+F + +++W++ GGG H T Y + + +KY VQ+YLEP Sbjct: 203 ALAVTLAAVEKKFADLLPRMKWLNFGGGHHITRPGYALDTLESCILSVRQKYGVQVYLEP 262 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN----TGPY 288 GEA N L TTVLD N + + D S H PD + + + Sbjct: 263 GEAWALNAGYLVTTVLDTLRNGDTSLAILDMSAACHTPDVIEMPYRPPLLDAGEAGEKAH 322 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 T + G +CLAGDI G++ F P+ GD++ F D+A Y + N FNG+ +P I + D Sbjct: 323 TVRLGGPTCLAGDIIGDYSFNAPLAEGDKLIFGDMAIYTTCKNNTFNGMPLPPIWLLGAD 382 Query: 349 GTIKAIREFSYNDYYNNL 366 G + + F Y D+ L Sbjct: 383 GNCRELVHFGYQDFKMRL 400 >gi|84490355|ref|YP_448587.1| hypothetical protein Msp_1578 [Methanosphaera stadtmanae DSM 3091] gi|84373674|gb|ABC57944.1| LysA [Methanosphaera stadtmanae DSM 3091] Length = 429 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 75/391 (19%), Positives = 134/391 (34%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y+ID++K+ NN + K + + A K + L + S Sbjct: 29 KTPLYVIDEEKVRNNYNKLYTAFNSKYEDLHMCYAAKANTNLAVMKILEDEGSYIDAVSP 88 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ F E + E TI +++S L + K+I Sbjct: 89 GEIYTALLAGFTPERIVFTGNNVTNEELEYAHKTGVTINLDSISALERLSTIEGTKGKEI 148 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172 +R+NP V P S+ G K ++ +E K ++ G+ H E Sbjct: 149 SIRVNPMVEAGHHEHCITGGPKSKFGIKEEEAVEVYQKAIDLGFKPIGMHSHIGSEILES 208 Query: 173 LCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK--------DFCQRLKE 220 F ++ + G +++ GGG + + D + K Sbjct: 209 EPFMLAVETMMDIAGKVHKEVGVDFKFLDFGGGFGIPYEPTENELDLETFTTDIIKLFKS 268 Query: 221 FSEKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 E+Y + +Y+EPG +V N L T V I E+ + VD + + Sbjct: 269 KLEEYDMGKPAMYIEPGRFLVGNAEVLLTRVNTIKESYRKFAGVDCGFGTLLRPTMYGSY 328 Query: 278 SATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + N + G C +GD+F ++ GD ++ + Y + + Sbjct: 329 HHIVVANKINEENVEEIDIAGNLCESGDLFARDRPMPKLEEGDLLAILNAGAYAYSMASQ 388 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 +N P + N D R ++D +N Sbjct: 389 YNSRPRPAEVLVNKDEVDVIRRREEFSDLFN 419 >gi|270294148|ref|ZP_06200350.1| carboxynorspermidine decarboxylase [Bacteroides sp. D20] gi|270275615|gb|EFA21475.1| carboxynorspermidine decarboxylase [Bacteroides sp. D20] Length = 381 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 123/373 (32%), Positives = 194/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++++ L NL + AGV+++LA K FA W F +Y+D +T+SS+YE Sbjct: 10 PSPCYIMEEGLLRKNLALIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++SQ ++F A+ G+ Sbjct: 70 ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFHRFYPVVVAEGSGISCGI 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 RINP S + L +P P +R G E + G H +CE+ S+ L+ Sbjct: 130 RINPEYSEVETELYNPCAPGTRFGVMADPLPEELPAGIEGFHCHCHCESSSYE-LEHTLE 188 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E +F + +QI+W++LGGG T KDY V+ + L+ +Y QI LEPG A Sbjct: 189 HLEGKFSRWFSQIKWLNLGGGHLMTRKDYDVEHLVRLLQGLKGRYPHLQIILEPGSAFTW 248 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCG 294 T L++ ++DI EN + + S H+PD L + GPY + G Sbjct: 249 QTGVLSSEIVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAEMGDAGPYVYRLGG 308 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + N FNGI+ P IA+ +G + Sbjct: 309 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTTVKTNMFNGIHHPAIAMWTKEGKAEVF 368 Query: 355 REFSYNDYYNNLS 367 ++FSY DY +S Sbjct: 369 KQFSYEDYRGRMS 381 >gi|167648396|ref|YP_001686059.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter sp. K31] gi|167350826|gb|ABZ73561.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter sp. K31] Length = 390 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 117/373 (31%), Positives = 192/373 (51%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ + NL T + G +LLALK F+ W + D + +Y+DG +S L+ Sbjct: 19 VPSPCFVVDEAAVRRNLATLKDVGDRGGATMLLALKAFSMWSLADVVGEYLDGVCASGLW 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---- 117 E L E + G Y+ AY+ ++ +L D +IFN+ Q+ +F+D + Sbjct: 79 EARLAREHYRGHLTTYSPAYRREDLPDILRLSDAVIFNSPDQMARFRDLIATARDQGQVF 138 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 IGLR+NP S ++ DP + SRLG ++ V+GL H CE F Sbjct: 139 EIGLRLNPEHSEAEVAKYDPCQAGSRLGFPVSRLRLEHLEGVDGLHVHALCEQG-FEPLR 197 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + ++E + + +++W++LGGG H T DY + L++ S ++ +Q+ LEPGEA Sbjct: 198 RIWASLEPKLEGMLGRLKWLNLGGGHHITRADYDKEGLVAFLRQISARHGLQVVLEPGEA 257 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-NTGPYTAMVCGR 295 I + L +LD +N + I D S H+PD + + T + G Sbjct: 258 IALDAGILVGEILDTFDNAMTVAITDISATCHMPDVIEAPYRPALLNERPQGVTVRIGGP 317 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK-AI 354 SCLAGDI G++ F G RI+F D A Y++ + N FNG+ +P+IA+ N + + I Sbjct: 318 SCLAGDIIGDYVFAATPTPGMRIAFLDQAHYSMVKTNTFNGVPLPSIALWNSESDVLKLI 377 Query: 355 REFSYNDYYNNLS 367 R+F Y D+ + LS Sbjct: 378 RQFDYTDFRDRLS 390 >gi|16330194|ref|NP_440922.1| carboxynorspermidine decarboxylase [Synechocystis sp. PCC 6803] gi|1652682|dbj|BAA17602.1| carboxynorspermidine decarboxylase [Synechocystis sp. PCC 6803] Length = 387 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 118/371 (31%), Positives = 193/371 (52%), Gaps = 7/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P ++++++ L NL ++++A ++++LALK FA + F L + G ++SSL+ Sbjct: 17 LPSPCFVLEEELLQQNLAIFERLQQSAPIEVMLALKGFALFPCFPWLRSGLAGASASSLW 76 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+FG E H Y Y+ ++ A++ I FN++ Q +++++ + K GLR Sbjct: 77 EARLAAEEFGKEVHVYAPTYRPDDLPAIIPLASHITFNSLGQWHRYRESLKNTAVKAGLR 136 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + L +P SRLG + + + G + HN CE+ L Sbjct: 137 INPEYSPVQTDLYNPCVSGSRLGVQAAMLAGNLPSGITGFLSHNLCESDHLA-LEKTLGQ 195 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 IEK FG ++ QIEW++LGGG T + Y + + EF +++ ++ +EPG AI Sbjct: 196 IEKLFGEYLPQIEWLNLGGGHLMTSQGYDMDYAIAVIGEFHQRHPHLRLIMEPGSAIAWQ 255 Query: 241 TTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMVCGR 295 T L +TV D I ++D S AH+PD L + P T + G Sbjct: 256 TGFLLSTVEDLIETPEFTHAMLDVSFTAHMPDCLEMPYRPEVRGARVPQTGDTVYRLGGS 315 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 SCLAGD G++ F++P+++GDR+ FED+ Y + + FNG++ P I G + R Sbjct: 316 SCLAGDFLGDYAFDQPLQVGDRLIFEDMMHYTMVKTTTFNGVHHPAIGCLRRSGEFELWR 375 Query: 356 EFSYNDYYNNL 366 F Y DY N L Sbjct: 376 TFGYEDYRNRL 386 >gi|317478905|ref|ZP_07938053.1| carboxynorspermidine decarboxylase [Bacteroides sp. 4_1_36] gi|316904939|gb|EFV26745.1| carboxynorspermidine decarboxylase [Bacteroides sp. 4_1_36] Length = 381 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 124/373 (33%), Positives = 195/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++++ L NL + AGV+++LA K FA W F +Y+D +T+SS+YE Sbjct: 10 PSPCYIMEEGLLRKNLALIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++SQ ++F A+ G+ Sbjct: 70 ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFHRFYPVVVAEGSGISCGI 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 RINP S + L +P P +R G E + G H +CE+ S+ L+ Sbjct: 130 RINPEYSEVETELYNPCAPGTRFGVMADPLPEELPVGIEGFHCHCHCESSSYE-LEHTLE 188 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E +F + +QI+W++LGGG T KDY V+ + L+ +YS QI LEPG A Sbjct: 189 HLEGKFSRWFSQIKWLNLGGGHLMTRKDYDVEHLVRLLQGLKGRYSHLQIILEPGSAFTW 248 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCG 294 T L++ ++DI EN + + S H+PD L + GPY + G Sbjct: 249 QTGVLSSEIVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAEMGDAGPYVYRLGG 308 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + N FNGI+ P IA+ +G + Sbjct: 309 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTTVKTNMFNGIHHPAIAMWTKEGKAEVF 368 Query: 355 REFSYNDYYNNLS 367 ++FSY DY +S Sbjct: 369 KQFSYEDYRGRMS 381 >gi|255034946|ref|YP_003085567.1| carboxynorspermidine decarboxylase [Dyadobacter fermentans DSM 18053] gi|254947702|gb|ACT92402.1| carboxynorspermidine decarboxylase [Dyadobacter fermentans DSM 18053] Length = 385 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 116/379 (30%), Positives = 197/379 (51%), Gaps = 14/379 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P ++++++ L NL+ +++ AG +++LALK F+ + F + +Y+ G T+SSL Sbjct: 8 IPSPCFILEEELLRKNLELIDSVQQAAGCQIILALKGFSMYSAFPIVKEYLSGATASSLN 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-------QKL 114 EV L ++ G ++H Y AY D E + ++ I FN++SQ +F+ + Sbjct: 68 EVKLINDFMGYQSHTYMPAYLDGEFEEIMQRSSHITFNSLSQWERFQGRVEAYKAANPDK 127 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 G+R+NP S + +P P SRLG + ++G+ FH CEN S Sbjct: 128 TLSCGIRVNPQYSEVATDMYNPCVPGSRLGVTRDKLPDELPAGIDGIHFHTLCENGS-DT 186 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 L +E+ FG + Q +W+++GGG T + Y + + + EKY++++ LEPG Sbjct: 187 LERTLAALEERFGDLLHQAKWLNMGGGHLMTREGYDISKLIKLVSTIKEKYNLEVILEPG 246 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIY-----PNTGPY 288 AI T L T VLD+ ++ V + + A H+PD L I P G Sbjct: 247 SAIAWRTGILYTMVLDVLDSQGIDVAILDTSFAAHMPDTLEMPYKPVIRGAYQDPEPGKP 306 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 T + G +CLAGD G++ F++P+ GD+I FED+ Y + + FNG+N+P+I + D Sbjct: 307 TYRMGGMTCLAGDYMGDYSFDQPLAAGDKIIFEDMIHYTMVKTTTFNGVNLPSIGIWKAD 366 Query: 349 GTIKAIREFSYNDYYNNLS 367 + +R + Y + + LS Sbjct: 367 QKFQLVRSYGYESFKDRLS 385 >gi|153806559|ref|ZP_01959227.1| hypothetical protein BACCAC_00829 [Bacteroides caccae ATCC 43185] gi|149131236|gb|EDM22442.1| hypothetical protein BACCAC_00829 [Bacteroides caccae ATCC 43185] Length = 366 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 116/367 (31%), Positives = 192/367 (52%), Gaps = 9/367 (2%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 ++++ L NL + AGV+++LA K FA W F +Y+D +T+SS+YE L E Sbjct: 1 MEEELLRKNLSLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYEARLALE 60 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGLRINPSV 126 +FG + H Y+ AY + + ++ I FN+++Q +F A+ G+R+NP Sbjct: 61 EFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMAQFERFYPMTVAKGGGISCGIRVNPEY 120 Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 S + L +P P +R G ++ + + G H +CE+ SF L+++E++F Sbjct: 121 SEVETELYNPCAPGTRFGITADLLPDTLPQGIEGFHCHCHCESSSFE-LERTLEHLEEKF 179 Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLN 245 + Q++W++LGGG T KDY + + L+ +Y +I LEPG A T L Sbjct: 180 SRWFPQLKWLNLGGGHLMTRKDYDTEHLIKLLQGLKARYPHLRIILEPGSAFTWQTGVLT 239 Query: 246 TTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSCLAG 300 + V+DI E+ + + S H+PD L + N G Y + G SCL+G Sbjct: 240 SEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGGNSCLSG 299 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 D G + F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ +G + ++FSY Sbjct: 300 DYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTKEGKAEIYKQFSYE 359 Query: 361 DYYNNLS 367 DY + +S Sbjct: 360 DYRDRMS 366 >gi|329964808|ref|ZP_08301831.1| carboxynorspermidine decarboxylase [Bacteroides fluxus YIT 12057] gi|328524659|gb|EGF51722.1| carboxynorspermidine decarboxylase [Bacteroides fluxus YIT 12057] Length = 381 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 121/373 (32%), Positives = 195/373 (52%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + A V+++LA K FA W F +Y++ +T+SS+YE Sbjct: 10 PSPCYIMEEELLRRNLALIKSVAHRADVEIILAFKSFAMWRSFPVFREYVEHSTASSVYE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN+++Q N+F A G+ Sbjct: 70 ARLAMEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLAQFNRFYPVTVAAGSGISCGV 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 RINP S + L +P P +R G E + + G H +CE+ S+ L Sbjct: 130 RINPEYSEVETELYNPCAPGTRFGLMADQLPEVLPQGIEGFHCHCHCESSSYE-LERTLA 188 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E +F + +QI+W++LGGG T KDY V+ + L+ +Y +I LEPG A Sbjct: 189 HVEAKFSKWFSQIKWLNLGGGHLMTRKDYDVEHLIRLLQGLKARYPHLRIILEPGSAFTW 248 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294 T L + V+D+ EN + + S H+PD L ++ N GPY + G Sbjct: 249 QTGVLTSEVVDVVENRGIRTAILNVSFTCHMPDCLEMPYQPSVRGARMGNEGPYVYRLGG 308 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ G + Sbjct: 309 NSCLSGDYMGLWSFDHELRIGERIVFEDMIHYTMVKTNMFNGIHHPAIAMWTKKGNAEIY 368 Query: 355 REFSYNDYYNNLS 367 ++FSY DY + +S Sbjct: 369 KQFSYEDYRDRMS 381 >gi|188994129|ref|YP_001928381.1| carboxynorspermidine decarboxylase [Porphyromonas gingivalis ATCC 33277] gi|188593809|dbj|BAG32784.1| carboxynorspermidine decarboxylase [Porphyromonas gingivalis ATCC 33277] Length = 378 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 117/372 (31%), Positives = 183/372 (49%), Gaps = 8/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y++++ L NL + GV+++LA K +A W F + +Y+ +T+SS++ Sbjct: 7 IASPAYVLEEDLLRRNLSLIASVADRTGVEIILAFKAYALWRTFPIIREYVPHSTASSVW 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+ G H ++ AY E +L + FN++SQ + + +GLR Sbjct: 67 EARLAFEEMGAPAHTFSPAYTPEEFPEILRYSSHVTFNSLSQYYLLSPMVKNVGVSLGLR 126 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + L +P P SR G + ++ + + GL FH CE+ F LK Sbjct: 127 INPEYSAVETALYNPCAPGSRFGVSASELGDTLPEGIEGLHFHTLCESTGFE-LEKTLKI 185 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 IE F + Q W+++GGG T +DY V+ Q L +FS ++ + +EPG A Sbjct: 186 IEDRFASVLEQARWLNMGGGHLMTRRDYDVEHLVQVLNDFSRRHPHLHLIMEPGSAFGWQ 245 Query: 241 TTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-----YTAMVCG 294 T L +TV+DI IVD S H+PD L I T + G Sbjct: 246 TGFLKSTVVDIVEHQGIATAIVDVSFTCHMPDCLEMPYKPVIRGAHQEPVPGLPTYRIGG 305 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G++ F++P+++GD + FED+ Y + FNG+ P I + DG + + Sbjct: 306 CSCLSGDFIGDWSFDRPLQVGDELIFEDMLHYTTVKTTMFNGVRHPDIVLLRTDGKKEVL 365 Query: 355 REFSYNDYYNNL 366 R F Y DY N + Sbjct: 366 RRFDYEDYKNRM 377 >gi|291278645|ref|YP_003495480.1| diaminopimelate decarboxylase [Deferribacter desulfuricans SSM1] gi|290753347|dbj|BAI79724.1| diaminopimelate decarboxylase [Deferribacter desulfuricans SSM1] Length = 417 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 67/384 (17%), Positives = 124/384 (32%), Gaps = 22/384 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + + A+K + + + L + G S Sbjct: 25 VGTPFYVYSAATLKRHFEVFDASFEEVPHIICFAVKANSNLAVLNLLGKLSCGADIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y K E D + +L K + A +L KK Sbjct: 85 ELYRALKAGIDPKKIVYAGVGKTEEEIEFALKSDILMFNIESFQELEKINEVAGRLKKKA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC-- 167 LR+NP+V ++ G ++ + V G H Sbjct: 145 RIALRVNPNVDPKTHPYISTGLKKNKFGIPIENAYQEYEYAASLDNIEVVGAHCHIGSQL 204 Query: 168 -ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSE 223 E F+ + ++ ++ K I+++ LGGG+ + ++ ++ + Sbjct: 205 TEISPFVDATKIMVDMIKTLKSKGINIKYLDLGGGLGIKYNEEMPPSPKEYADKIIDVIR 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---A 279 V + EPG I N L T VL E K+ IVD+++ + L Sbjct: 265 GLDVTLVFEPGRVIAGNAGVLVTRVLYTKETELKHFKIVDAAMNDLMRPILYGSFHDIKP 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C GD + + GD I+ Y + +N Sbjct: 325 VKEGHYKTVYGDIVGPICETGDFLAKDRNLPDFQQGDLIAVMSAGAYGFTMSSNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYY 363 + N D R +Y+D Sbjct: 385 VPEILVNKDKYYIVRRRETYDDLI 408 >gi|320355119|ref|YP_004196458.1| carboxynorspermidine decarboxylase [Desulfobulbus propionicus DSM 2032] gi|320123621|gb|ADW19167.1| carboxynorspermidine decarboxylase [Desulfobulbus propionicus DSM 2032] Length = 394 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 130/375 (34%), Positives = 200/375 (53%), Gaps = 12/375 (3%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP +++D+ L +NL +++ G K+LLALKCFA + +F L Q +DG SS +E Sbjct: 21 TPAFVVDEGLLADNLALLAQVKQATGCKILLALKCFAMFSVFPLLRQVLDGVCCSSPHEA 80 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK------ 117 LG E+FG E H++ AY + +I+ + D ++FN+ Q +F+ A+ K+ Sbjct: 81 RLGREEFGREVHSFAAAYSEHDIEQLAVTSDHLVFNSFGQWQRFRSLAETTAKRTGRELK 140 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 GLR+NP S + DP P SRLG + KD + ++GL +HN CE C Sbjct: 141 FGLRVNPEHSEGATPIYDPCAPGSRLGIRRKDFRADLLDGISGLHWHNLCEQD-ADCLQR 199 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 + +E+ F I Q+ +I+ GGG H T Y + + F +++ VQ+YLEPGEA+ Sbjct: 200 TVAAVERNFAEVIPQMAYINFGGGHHITRPGYQLDLLIDIVGRFQDRWGVQVYLEPGEAV 259 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVC 293 N L TVLD+ + I+D+SV AH+PD L I + +T + Sbjct: 260 ALNAGYLVATVLDVVNADMPIAIIDASVPAHMPDVLEMPYRPHIVGSGEAGEKAWTCRIG 319 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIK 352 G SCLAGD+ GE+ F+ + GDR+ F D+A Y + + N FNG+ +P+I D + Sbjct: 320 GLSCLAGDVAGEYSFDAELAPGDRLVFTDMAIYTMVKTNTFNGVQLPSIMRYRPDDDELV 379 Query: 353 AIREFSYNDYYNNLS 367 +R F Y ++ LS Sbjct: 380 LVRRFGYEEFKTRLS 394 >gi|254427501|ref|ZP_05041208.1| diaminopimelate decarboxylase [Alcanivorax sp. DG881] gi|196193670|gb|EDX88629.1| diaminopimelate decarboxylase [Alcanivorax sp. DG881] Length = 413 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 65/386 (16%), Positives = 124/386 (32%), Gaps = 22/386 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL + L + + ++ A+K + + + L + G S E Sbjct: 26 GTPLYLYSRAALERHYLAFDEAFGDHPHQVCYAVKANSNLAVLNVLARCGAGFDIVSGGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K D A+ +N + ++L A +L + Sbjct: 86 LERVLRAGGDPDKIVFSGVGKTADEMAAALKANIHCFNVESAAELELLNLVAGELDREAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170 I +R+NP V ++ G + E + G+ H + Sbjct: 146 IAIRVNPDVDAQTHPYISTGLKDNKFGVDITKAPALYQRAAELPHIRILGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F L+ + K +I + LGGG+ T D D ++ + Sbjct: 206 KLAPFEDALERVLKLLAQLQEHGIEIHHLDLGGGLGVTYDDETPPDRSAYVQALLKHIPG 265 Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYPN 284 +++EPG +I N T VL + IVD ++ + L + Sbjct: 266 ELPVHIEPGRSIAANAGLFITQVLFLKPTEHKNFAIVDGAMNDLIRPSLYSAWQNIVPVK 325 Query: 285 TGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + G C GD G+ ++ GD ++ Y + +N N P Sbjct: 326 PHDADCREWDIVGPVCETGDFLGKDRALS-LETGDLLAVRSAGAYGFAMASNYNSRNRPA 384 Query: 342 IAVKNVDGTIKAIREFSYNDYYNNLS 367 + + D + +Y+D S Sbjct: 385 EIMVDGDQAFVVRQRETYDDQLKQES 410 >gi|83643199|ref|YP_431634.1| diaminopimelate decarboxylase [Hahella chejuensis KCTC 2396] gi|83631242|gb|ABC27209.1| diaminopimelate decarboxylase [Hahella chejuensis KCTC 2396] Length = 423 Score = 255 bits (652), Expect = 7e-66, Method: Composition-based stats. Identities = 60/385 (15%), Positives = 123/385 (31%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L +L + A+K + + + L + G S+ E Sbjct: 26 GTPCYIYSRATLERHLKAYQTAMDGYPHMICYAVKANSNLAVLNVLARLGAGFDIVSVGE 85 Query: 63 VMLGH-EKFGGETHAYNV-AYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + E ++ + A+ + +L + + A Sbjct: 86 MERVLAAGGKPERIVFSGVGKLEHEMRRALEVGVHCFNVESAPELERLQQVAADMGKKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I +R+NP V ++ G + +E +V G+ H + Sbjct: 146 ISIRVNPDVDPQTHPYISTGLKENKFGVSIDEALELYHSAAVSPHLDVIGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F L+ I + + +++ + LGGG+ T + + + E + Sbjct: 206 QISPFLDALERVLNIIETLRNEGIRLKHLDLGGGLGVTYNQETPPHPNEYARAVMERLKG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + LEPG +I N + T V + N K+ IVD+++ + L + Sbjct: 266 SGLTLVLEPGRSIAANAGLMVTRVEYLKHNGHKDFAIVDAAMNDLIRPSLYGAWQNIVPV 325 Query: 284 NTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G C GD G+ +K GD ++ Y + +N Sbjct: 326 RQHSEGKEARYDIVGPVCETGDFIGKERLL-NLKPGDLLAVRSAGAYGFVMSSNYNSRGR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D R + + + Sbjct: 385 AAEVMVDGDKHYLVRRRETIEELFA 409 >gi|295101690|emb|CBK99235.1| carboxynorspermidine decarboxylase [Faecalibacterium prausnitzii L2-6] Length = 404 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 131/378 (34%), Positives = 192/378 (50%), Gaps = 14/378 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP YL+D+ +L N + L +++ G K+LLA K F+ + ++ L + GT +S LY Sbjct: 24 LPTPCYLLDEAQLRRNGEILLGVQQRTGCKILLAQKAFSNFDLYPLLAPCLAGTEASGLY 83 Query: 62 EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E LG E+ E H + AY+ E + +L D I+FN+ +QL KF A+ K +GL Sbjct: 84 ESRLGKEELPEKENHVFCAAYRVDEFNELLDYADHIVFNSPAQLAKFGPAAKAAGKSVGL 143 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173 RINP S + DP P SRLG + K ++GL FH CE Sbjct: 144 RINPERSTQEGHAIYDPCAPGSRLGTTRAQWDAALAKQPGLAALLDGLHFHTLCEQD-AD 202 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + L +E++FG + ++W++ GGG H T Y + + EKY VQ+YLEP Sbjct: 203 ALAVTLDAVEEKFGDLLPGLKWLNFGGGHHITRPGYDLAALEACIARMQEKYGVQVYLEP 262 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY----PNTGPY 288 GEA N L TTVLD +N + + D S H PD + + P P Sbjct: 263 GEAWALNAGYLVTTVLDTLQNGNTSLAILDMSAACHTPDVIEMPYRPPLLDAGEPGEKPC 322 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 T + G +CLAGD+ G++ F+ P+ GDR+ F D+A Y + N FNG+ +P I D Sbjct: 323 TIRLGGPTCLAGDVVGDYSFDAPLAEGDRLLFGDMAIYTTCKNNTFNGMPLPPIWALAED 382 Query: 349 GTIKAIREFSYNDYYNNL 366 GT + + F YND+ L Sbjct: 383 GTCRELVRFGYNDFKMRL 400 >gi|120553431|ref|YP_957782.1| diaminopimelate decarboxylase [Marinobacter aquaeolei VT8] gi|120323280|gb|ABM17595.1| diaminopimelate decarboxylase [Marinobacter aquaeolei VT8] Length = 416 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 65/382 (17%), Positives = 129/382 (33%), Gaps = 24/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + KN + A+K + + + L + G S E Sbjct: 26 GTPAYIYSRATLERHYRAYDEALKNRPHLVCYAVKANSNLAVLNVLARLGAGFDIVSAGE 85 Query: 63 VMLG-HEKFGGETHAYNV-AYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ ++ E+ A+ + + ++L++ A +L Sbjct: 86 LERVLRAGGDAGKVVFSGVGKQEWEMKRALEAGVRCFNVESDTELDRLNKVAGELGVKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + +++G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIDIAEAPAVYARAASLPNLDIHGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 S F L + +I + +GGG+ T +K +E+ Sbjct: 206 SVSPFLDALGRVLSLIDTLAEQGIRIRHLDMGGGLGVTYNQETPPQPADYVKALNERMGD 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281 + + LEPG +I N L T V + I+D+++ + L A I Sbjct: 266 RELELVLEPGRSIAANAGILVTRVEFLKCTEHRNFAIIDAAMNDLIRPALYSAWQAIIPV 325 Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + ++ + G C GD G+ + +K GD ++ Y + +N N Sbjct: 326 QPHQDSEERPWDLVGPVCETGDFLGKDRALR-LKAGDLLAVRSAGAYGFVMASNYNTRNR 384 Query: 340 PTIAVKNVDGTIKAIREFSYND 361 P + + D R + +D Sbjct: 385 PPELMVDGDQVHVVRRRETLDD 406 >gi|257439172|ref|ZP_05614927.1| carboxynorspermidine decarboxylase [Faecalibacterium prausnitzii A2-165] gi|257198423|gb|EEU96707.1| carboxynorspermidine decarboxylase [Faecalibacterium prausnitzii A2-165] Length = 404 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 129/378 (34%), Positives = 197/378 (52%), Gaps = 14/378 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP YL+D+ +L N + L +++ G K+LLA K F+ + ++ L Y+ GT +S LY Sbjct: 24 LPTPCYLLDEARLRRNGEILLGVQQRTGCKILLAQKAFSNYDLYPVLAPYLAGTEASGLY 83 Query: 62 EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E LG E+ E H + AY+ + + +L D I+FN+ QL KF A+ K +GL Sbjct: 84 ESRLGREELPEKENHVFCAAYRADQFEELLQYADHIVFNSPHQLAKFGPAAKAAGKSVGL 143 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173 R+NP S + DP P SRLG + ++ ++GL FH CE S Sbjct: 144 RVNPEHSTQEGHEIYDPCAPGSRLGTTRAQWDAAAAQHPDLPDLLDGLHFHTLCEQDSDA 203 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + + E +FG + +++W++ GGG H T DY + + + EKY VQ+YLEP Sbjct: 204 LAATLPAL-EAKFGDLLPRMKWLNFGGGHHITRPDYDLATLEKCITGTQEKYGVQVYLEP 262 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY----PNTGPY 288 GEA N L TTVLD +N + + + D S H PD + + P P Sbjct: 263 GEAWALNAGYLVTTVLDTLQNGETHLAILDMSAACHTPDVIEMPYRPPLLDAGEPGEKPC 322 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 T + G +CLAGD+ G + F P+ GDR+ F D+A Y+ + N FNG+ +P I V + + Sbjct: 323 TFRLGGPTCLAGDVVGNYSFAAPLTEGDRLIFGDMAIYSTCKNNTFNGMPLPDIWVLHEN 382 Query: 349 GTIKAIREFSYNDYYNNL 366 GT + + F Y+D+ L Sbjct: 383 GTTQPLARFGYHDFKYRL 400 >gi|89091913|ref|ZP_01164868.1| diaminopimelate decarboxylase [Oceanospirillum sp. MED92] gi|89083648|gb|EAR62865.1| diaminopimelate decarboxylase [Oceanospirillum sp. MED92] Length = 418 Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats. Identities = 58/385 (15%), Positives = 120/385 (31%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + L + G S+ E Sbjct: 26 GTPTYVYSRDALERAYLAYADALEGHKSLVCYAVKANSNLAVLNVLARLGAGFDIVSVGE 85 Query: 63 VMLG-HEKFGGETHAYNV-AYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ + E A+ + ++L + + A K Sbjct: 86 LERVLRAGGDAAKIVFSGVGKQPHEIQRALEVGIRCFNIESEAELERVNEVAGSEGKVAA 145 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + R+NP V ++ G D + + +V G+ H + Sbjct: 146 ISFRVNPDVDAGTHPYISTGLKENKFGIDIDDAVRIYSRAADMDHVDVVGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 F L + + +I+ + LGGG+ D + + E +K Sbjct: 206 EVDPFLDALDRVLMLVDKIAEQGIKIKHLDLGGGLGVCYTDEVPPTPQEYIAEVLKKVEG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ EPG +I N + T V + KN I+D ++ + L + Sbjct: 266 RDLELIFEPGRSIAANAGVMLTRVEFLKCTGEKNFAIIDGAMNDLIRPSLYSAYQEIVPV 325 Query: 284 N----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G C GD G+ ++ GD ++ Y + +N Sbjct: 326 MLRETGEEQQWDLVGPVCETGDFLGKDRSL-NLEAGDLLAVCSAGAYGFVMASNYNSRGR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P + + + + + S D Sbjct: 385 PAEVMIDDNKSYLIRKRESLADLVK 409 >gi|224372172|ref|YP_002606544.1| carboxynorspermidine decarboxylase [Nautilia profundicola AmH] gi|223588820|gb|ACM92556.1| carboxynorspermidine decarboxylase [Nautilia profundicola AmH] Length = 371 Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats. Identities = 150/372 (40%), Positives = 216/372 (58%), Gaps = 9/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+I+++ L NL ++K A K+L+ALK +A W FD L +Y+ G T+S L+ Sbjct: 3 INTPAYVIEEKLLEKNLKVLDRVQKEADAKILVALKGYATWSTFDLLEKYLSGATASGLW 62 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L + K E H Y A+KD EID V T++FN+ +QL +F+++ + IGLR Sbjct: 63 EAKLANMK-PWEVHTYCPAFKDSEIDEVADISHTVVFNSFNQLERFENRVKDKSL-IGLR 120 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS S L DP PFSRLG + ++KNV+GL FH CE L+ Sbjct: 121 VNPGVSSSPVPLYDPCAPFSRLGIPKVNFKADKLKNVSGLHFHALCEQL-DDALERTLEG 179 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVT 239 EK +G ++ +EW++ GGG H T + Y V+ + +K F +Y +YLEPGEA+ Sbjct: 180 FEKLYGEYLKDMEWVNFGGGHHITREGYDVEHLIEMIKAFRSRYPNIKDVYLEPGEAVGL 239 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 N L VLDI +N + I+D+S EAH+PD L + PN YT + G Sbjct: 240 NAGYLVAEVLDIIDNGMKIAILDTSAEAHMPDVLAMPYRPVVRGAGEPNEKKYTYRLGGV 299 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGD+ G++ F+KP++IGD++ FED+A Y + + FNGI +P I +K DG+I R Sbjct: 300 TCLAGDVIGDYSFDKPLEIGDKVIFEDMAIYTMVKNTAFNGIKLPDIIIKRKDGSIYKAR 359 Query: 356 EFSYNDYYNNLS 367 EF Y D+ N LS Sbjct: 360 EFHYEDFKNRLS 371 >gi|320102687|ref|YP_004178278.1| diaminopimelate decarboxylase [Isosphaera pallida ATCC 43644] gi|319749969|gb|ADV61729.1| diaminopimelate decarboxylase [Isosphaera pallida ATCC 43644] Length = 472 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 115/398 (28%), Gaps = 36/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L L+ + + ++K + + L + G S E Sbjct: 29 GTPLYVYSRAAFLAALEELQSVFAEFDPVICYSVKANSNLSVLKMLAAHGSGFDVVSSGE 88 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + E + K E A S + ++L+ + L Sbjct: 89 LRRVEEAGGDPGRTVFAGVGKTDEEIAHALKSGVLMFNVESEAELDAIDRVSREHGLQAP 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170 + R+NP V S+ G + + V GL H + Sbjct: 149 VAPRVNPDVDPQTHRYISTGHKESKFGMDITRALRLTERARDMAGIKVVGLHMHIGSQIT 208 Query: 171 SFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEK 224 ++ I+W++LGGG + P+ + + Sbjct: 209 KTQPYADAAAKAADLVATMRGQGHAIQWLNLGGGFGIDYRGGEAQPITAYAAVMAPAIRA 268 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQES----- 278 ++ LEPG + N L + V+ + K +I D+++ + L Sbjct: 269 SGCRLALEPGRRVAGNAGVLLSRVIFTKVSGDKRFLIQDAAMNDLLRPSLYQAFHKIWPV 328 Query: 279 ------------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 V G C +GD + P++ GD ++ Y Sbjct: 329 EASMQPPDIPAGHDGSQPGASDAWDVVGPVCESGDFLAKDRPLPPLERGDLLAVFSAGAY 388 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + + R +Y+D Sbjct: 389 GMVMASNYNTRPRPAEVLVEGNHARLIRRRETYDDLVA 426 >gi|319956050|ref|YP_004167313.1| diaminopimelate decarboxylase [Nitratifractor salsuginis DSM 16511] gi|319418454|gb|ADV45564.1| diaminopimelate decarboxylase [Nitratifractor salsuginis DSM 16511] Length = 407 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 125/387 (32%), Gaps = 25/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D ++ N + + A+K + + + G SL E Sbjct: 13 GTPLYVYDFDQMRENYRRLKEAFAGSKSLIAYAVKANSNLSVISLFGKLGAGADCVSLGE 72 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 ++ ++ K + I + +++++ ++ AQ+L ++ Sbjct: 73 ILRARTAGIEPYRIIFSGVGKRDDEIEAALKEGILMINLESEAEMHRVEEVAQRLGQEAR 132 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + R+NP+V ++ G + + G+ FH + Sbjct: 133 ISIRVNPNVDPQTHPYISTGLHENKFGVEIDRAKRMYIYAKNSDWLDPVGIHFHIGSQLT 192 Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 ++ ++ + +I + +GGG+ +D V+++ + + E + Sbjct: 193 ELEPIKEAASIVADLVRSLAAIGIEIRFFDVGGGLGVVYRDETPIDVEEYAKVITESIKG 252 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----- 278 + I EPG + N L T VL + K VIVD+++ + L Sbjct: 253 LDLTIICEPGRYLTANAGWLLTRVLYEKNNGAKRFVIVDAAMNDLMRPTLYQAYHGVEYL 312 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 A + G C +GD + P + GD ++ Y + +N Sbjct: 313 EPDAKERGEATPADLVGPICESGDWLAKERLLPPTRSGDLLAIRSAGAYGFTMASNYNTR 372 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 P ++ D Sbjct: 373 GRPAEVACEQGQCRLIRDRENFEDQIR 399 >gi|298373786|ref|ZP_06983775.1| carboxynorspermidine decarboxylase [Bacteroidetes oral taxon 274 str. F0058] gi|298274838|gb|EFI16390.1| carboxynorspermidine decarboxylase [Bacteroidetes oral taxon 274 str. F0058] Length = 387 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 124/374 (33%), Positives = 190/374 (50%), Gaps = 10/374 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P ++ID++ L NLDT + + AGV++++A K FA W +F + +Y+ TT+SSL Sbjct: 14 IPSPCFVIDERLLRQNLDTIAQVSRRAGVEIIMAFKAFAMWKVFPIIKEYVTHTTASSLA 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L +KFG + H Y AY D E D ++ I FN+++Q K+ + Q GLR Sbjct: 74 EARLSVDKFGNKAHLYAPAYTDGEFDELVECSTHITFNSLAQFEKYYGRTQGRDISCGLR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP +S + L +P + SRLG + E V GL FH CEN SF ++ Sbjct: 134 INPEISVVETDLYNPAKAGSRLGITAEQLPEKLPDGVEGLHFHVLCENSSFDLEKVLVGL 193 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 +F + Q++W+++GGG T K Y + + + F +KY I LEPG A V Sbjct: 194 -ADKFDRQLRQVKWLNMGGGHLMTRKGYNINHLIEVISAFRQKYPHLHIILEPGAAFVWQ 252 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYPNTGPYT-------AMV 292 T L V DI EN + + H+PD L IY + Sbjct: 253 TGILKAQVEDIVENHGIRTAMLNVSFACHMPDCLEMPYQPRIYGAEMTQPDAQGNNVYRM 312 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G SCL+GD G + F KP+ +GD I FED+ Y + FNG++ P+I + +G Sbjct: 313 GGNSCLSGDFVGSWVFPKPLVVGDIIIFEDMIHYTTVKTTMFNGVSHPSIGIVKENGEFV 372 Query: 353 AIREFSYNDYYNNL 366 +++F++ DY++ + Sbjct: 373 LLKQFTHQDYFDRM 386 >gi|212551101|ref|YP_002309418.1| carboxynorspermidine decarboxylase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549339|dbj|BAG84007.1| carboxynorspermidine decarboxylase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 380 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 124/375 (33%), Positives = 200/375 (53%), Gaps = 10/375 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+I+++ L NL +++ AG+K++LA K FA W F + +Y++ + +SS + Sbjct: 7 IPSPAYVIEEKLLRKNLSLIKSVQEQAGIKIILAFKAFAMWKSFPIIREYVNYSAASSAW 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIG 119 E L EK G + H Y+ AY + E + S I FN++SQ +F K G Sbjct: 67 EARLALEKMGSKAHTYSPAYTEEEFPVIKSCSSHITFNSMSQFYRFYKKTLNNLTKISCG 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRINP S + L +P SRLG ++ + + + GL FH E+ S+ L Sbjct: 127 LRINPEYSEVRTSLYNPVVSGSRLGITREELGNNLPEGIEGLHFHTLFESNSYA-LENTL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 ++E +FG ++I+W+++GGG T ++Y + + L+ F +KY QI LEPG A V Sbjct: 186 NHVEDKFGDLFSKIKWLNMGGGHLITQENYSITHLIELLQNFRKKYPHLQIILEPGAAFV 245 Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY-----PNTGPYTAMV 292 T L ++V+DI +N + + + S H+PD L I G T + Sbjct: 246 WQTGVLVSSVVDIVKNNRVETAILNISFTCHMPDCLEMPYQPRIRGALQKVIEGKPTYRM 305 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G SCL+GD G++ F + +KIGD+I FED+ Y + + FNGI P I + ++ ++ Sbjct: 306 GGNSCLSGDFIGDWSFNEELKIGDKIIFEDMIHYTVVKTTMFNGIPHPDIYIWKINDKLE 365 Query: 353 AIREFSYNDYYNNLS 367 R+F+Y+DY N +S Sbjct: 366 IYRKFNYDDYKNRMS 380 >gi|94499814|ref|ZP_01306350.1| carboxynorspermidine decarboxylase [Oceanobacter sp. RED65] gi|94428015|gb|EAT12989.1| carboxynorspermidine decarboxylase [Oceanobacter sp. RED65] Length = 399 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 128/387 (33%), Positives = 203/387 (52%), Gaps = 23/387 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ + NL ++++ +G K+L ALK F+ + + QY+ GT SS L+ Sbjct: 14 LPSPCFVVDEVAIERNLKILHHVQEQSGAKVLQALKAFSMYHLAPLSRQYLSGTCSSGLH 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---- 117 E +LG E +GGE H ++ AY + ++ +L I+FNT SQ+ +F + +K Sbjct: 74 EALLGQEYYGGEVHVFSAAYSEDDLVRLLEFAHHIVFNTPSQILRFYPLLKAAQEKRDDL 133 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--------VNGLMFHNNCE 168 GLRINP S + DP SRLG + +++ + V+GL FH CE Sbjct: 134 SFGLRINPEHSEGAVPIYDPCAAGSRLGTTQDELMQALQTDEFHQAFHLVSGLHFHTLCE 193 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 F LK +E+ F ++ Q+ W++ GGG H T DY + ++ +KYSV Sbjct: 194 QG-FKPLQRTLKAVEERFAKWLPQMTWLNFGGGHHITAPDYDIHGLVNAIRLIKQKYSVD 252 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284 +YLEPGEA+ + L+ VLDI N I+D+S H+PD L I N Sbjct: 253 VYLEPGEAVAIGSGILSAEVLDIGFNQLPQAILDTSATCHMPDTLEMPYRPDIRFNNELA 312 Query: 285 ----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 Y G +CLAGD+ G++ FE+ +K+GDR+ FED+A Y + + FNG +P Sbjct: 313 GMADEKRYNYRFGGLTCLAGDVIGDYSFEQELKVGDRLIFEDMAHYTMVKTTTFNGTKLP 372 Query: 341 TIAVKNVD-GTIKAIREFSYNDYYNNL 366 +A+ N + +R FSY+D+ + L Sbjct: 373 ALAIWNSQTDDLNVVRVFSYDDFKSRL 399 >gi|206889561|ref|YP_002248957.1| diaminopimelate decarboxylase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741499|gb|ACI20556.1| diaminopimelate decarboxylase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 418 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 126/385 (32%), Gaps = 22/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L+ ++ + A+K + + + G S E Sbjct: 26 GTPLYIYSYGTLIRHIRAYEEAFCEVPHIICYAVKANSNLAILRIFAELGIGADIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + K E +N + ++L+K +KA+ L K Sbjct: 86 LFKALKAGIKPYKIVFAGVGKTDEEIEYALKNNILMFNVESEAELHKINEKAKNLKKVAS 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LR+NP + S+ G + ++ + V G+ H + Sbjct: 146 VALRVNPDIDPKTHKYIATGLKSSKFGIPIEKALDYYKLAKSMKNIKVIGIHKHIGSQIT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDF---CQRLKEFSEK 224 + L I + ++ +IE+I +GGG+ T +D L + Sbjct: 206 ETSAYVEALNKILSLYDQLANYDMEIEYIDIGGGLGITYRDEEPPHPKELADVLIPLVKN 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283 ++ +EPG +IV N L T VL E + I+ D+ + + L Sbjct: 266 KKGKLIIEPGRSIVGNAGILVTKVLYTKETEQKNFIIVDAGMNDLIRPTLYGSYHEIQPV 325 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 G A + G C +GD + + V G+ ++ Y + + +N Sbjct: 326 TPGKKEKIVADIVGPICESGDFLAKDREIEKVSAGEYLAVMSAGAYGFSMSSNYNSRPRV 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + D + +Y D N Sbjct: 386 AEVLVKGDQYALIRKRETYKDLIRN 410 >gi|242309951|ref|ZP_04809106.1| carboxynorspermidine decarboxylase NspC [Helicobacter pullorum MIT 98-5489] gi|239523248|gb|EEQ63114.1| carboxynorspermidine decarboxylase NspC [Helicobacter pullorum MIT 98-5489] Length = 403 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 138/392 (35%), Positives = 211/392 (53%), Gaps = 27/392 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+++++K + NL+ I+K +G K+LLALK +A W F+ +Y+ G T+S LY Sbjct: 13 IPSPCYVLEEEKFIKNLEILDSIQKQSGAKILLALKGYALWRSFEIAKKYLSGVTASGLY 72 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--- 118 E LG+E FGGE ++ +YK E+ ++ + IIFN+ Q FK + +K Sbjct: 73 EAKLGYETFGGEITTFSPSYKKEEMQELVKISNHIIFNSFVQWQTFKPMIDEANKMRENK 132 Query: 119 ---GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKS 171 GLR+NP S + +P SRLG K+ + K ++GL FH +CE S Sbjct: 133 IEVGLRVNPLYSEVTPEIYNPCIEGSRLGIPPKEFKKGVKKYGLEGISGLHFHTHCEQNS 192 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231 LK+ K FG +I Q++WI+ GGG H T KDY + + +K F +K+ ++YL Sbjct: 193 DALKRT-LKHFIKHFGDYIPQMQWINFGGGHHITRKDYDRELLVKIIKNFKDKFHTEVYL 251 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN------- 284 EPGEA+ L +V+DI N ++ I+D S AH+PD L + + Sbjct: 252 EPGEAVGWQCGFLIGSVIDIVHNGVDIAILDVSAAAHMPDCLEMPYRPMVRNSYGVKAVQ 311 Query: 285 ---------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 Y+ G +CLAGDI G++ F +P+KIGDRI FED+ Y I + N FN Sbjct: 312 KNGHLKLKGEKKYSYRFGGPTCLAGDIIGDYSFREPLKIGDRIIFEDMVHYTIVKNNTFN 371 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 GI +P+I + + +G + + +SY DY + S Sbjct: 372 GIPLPSIGMIDKEGKFQIFKSYSYEDYKHRNS 403 >gi|212703833|ref|ZP_03311961.1| hypothetical protein DESPIG_01885 [Desulfovibrio piger ATCC 29098] gi|212672801|gb|EEB33284.1| hypothetical protein DESPIG_01885 [Desulfovibrio piger ATCC 29098] Length = 409 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 131/398 (32%), Positives = 202/398 (50%), Gaps = 33/398 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY-----MDGTT 56 + +P +++D+ +L N +++ G K+LLALK FAAW F L++ + GT Sbjct: 13 VPSPCFVLDEARLAANAAILDSVQQRTGAKILLALKGFAAWDSFSLLSRAKGHGPLWGTC 72 Query: 57 SSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 +SS+ E LG E+FGGE HA+ + + E+D +L D ++FN+++Q +F K + + Sbjct: 73 ASSVDEARLGREEFGGEVHAFAAGWTEEELDELLPLVDHLVFNSLAQWERFGPKVRDWCR 132 Query: 117 K------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 GLRINP S + +P P SRLG + E+ + ++GL FH CE Sbjct: 133 DNGREISCGLRINPEHSEGAVAIYNPCSPGSRLGIRPHQLPETLPEGISGLHFHTLCEQG 192 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 S L +E FG + Q +WI+ GGG H T + Y + C+ + + Y QIY Sbjct: 193 S-DALERTLDAVEARFGKQLAQCKWINFGGGHHITREGYDLDRLCRCITRMQQNYGAQIY 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY-------- 282 LEPGEA+ N L TVLD+ + + I+D+S H+PD L + Sbjct: 252 LEPGEAVALNAGWLVATVLDVVQADMPIAILDTSASCHMPDVLEMPYRPNLLAPEDGELR 311 Query: 283 ----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 P+T + G+SCLAGD+ GE+ F P+K GDR+ F D+A Y++ + FNG+ Sbjct: 312 LAGENGEKPWTCRLAGKSCLAGDVIGEYSFAAPLKAGDRLIFTDMAIYSMVKTTTFNGLR 371 Query: 339 MPTI---------AVKNVDGTIKAIREFSYNDYYNNLS 367 +P+I A + +R F Y D+ LS Sbjct: 372 LPSIGSLAADLDAAAPAATARFRLVRRFGYEDFKTRLS 409 >gi|313142454|ref|ZP_07804647.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter canadensis MIT 98-5491] gi|313131485|gb|EFR49102.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter canadensis MIT 98-5491] Length = 397 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 67/384 (17%), Positives = 121/384 (31%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP ++ D K+ + + ALK + + L G SL E Sbjct: 8 QTPLFVYDFDKIEEYFNQFKLAFSGRKSLICYALKANSNLSVIKKLASLESGVDCVSLGE 67 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + Y+ K I + +L K + A+ L+ K Sbjct: 68 IKRAILAGIPTYKIIYSGVGKQDYEIQEAIKLGILFINIESKEELLKVESIAKTLNTKAR 127 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 + R+NP + ++ G ++ +SE G+ FH + Sbjct: 128 ISIRVNPDIDPQTHPYISTGLKENKFGIGVEEAKSLYLYAHKSESLEPIGIHFHIGSQIT 187 Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + + I + + I++ +GGG+ T KD D+ Q + E Sbjct: 188 KLQPIAESAQKIAQLLHSLLALKIDIKFFDIGGGLGITYKDETTINPYDYAQSILECLRG 247 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280 V I EPG I+ N+ T VL K VIV+ ++ + L Sbjct: 248 LDVTIICEPGRFIMGNSGVFLTQVLYEKISQEKRFVIVNGAMNDLIRPSLYNAYHKITPL 307 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C +GD G+ P+K GD ++ Y + + +N Sbjct: 308 NPREGELAPTDIVGPICESGDYLGKNIALPPLKAGDILAILSAGAYGFSMSSNYNTRPRC 367 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + ++ D Sbjct: 368 AEVAISQGKARLIRKRETFEDLIA 391 >gi|224418942|ref|ZP_03656948.1| diaminopimelate decarboxylase [Helicobacter canadensis MIT 98-5491] gi|253827889|ref|ZP_04870774.1| diaminopimelate decarboxylase [Helicobacter canadensis MIT 98-5491] gi|253511295|gb|EES89954.1| diaminopimelate decarboxylase [Helicobacter canadensis MIT 98-5491] Length = 418 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 67/384 (17%), Positives = 121/384 (31%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP ++ D K+ + + ALK + + L G SL E Sbjct: 29 QTPLFVYDFDKIEEYFNQFKLAFSGRKSLICYALKANSNLSVIKKLASLESGVDCVSLGE 88 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + Y+ K I + +L K + A+ L+ K Sbjct: 89 IKRAILAGIPTYKIIYSGVGKQDYEIQEAIKLGILFINIESKEELLKVESIAKTLNTKAR 148 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 + R+NP + ++ G ++ +SE G+ FH + Sbjct: 149 ISIRVNPDIDPQTHPYISTGLKENKFGIGVEEAKSLYLYAHKSESLEPIGIHFHIGSQIT 208 Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + + I + + I++ +GGG+ T KD D+ Q + E Sbjct: 209 KLQPIAESAQKIAQLLHSLLALKIDIKFFDIGGGLGITYKDETTINPYDYAQSILECLRG 268 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280 V I EPG I+ N+ T VL K VIV+ ++ + L Sbjct: 269 LDVTIICEPGRFIMGNSGVFLTQVLYEKISQEKRFVIVNGAMNDLIRPSLYNAYHKITPL 328 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C +GD G+ P+K GD ++ Y + + +N Sbjct: 329 NPREGELAPTDIVGPICESGDYLGKNIALPPLKAGDILAILSAGAYGFSMSSNYNTRPRC 388 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + ++ D Sbjct: 389 AEVAISQGKARLIRKRETFEDLIA 412 >gi|325957878|ref|YP_004289344.1| diaminopimelate decarboxylase [Methanobacterium sp. AL-21] gi|325329310|gb|ADZ08372.1| diaminopimelate decarboxylase [Methanobacterium sp. AL-21] Length = 428 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 71/392 (18%), Positives = 135/392 (34%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID+ ++ +N K K+ A K + L G + S Sbjct: 28 GTPLYVIDENRIRDNYKRLYNAFKDYYPNFKMFYACKANTNLAVMKILENEGSGIDAVSP 87 Query: 61 YEVMLGH-EKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ F E Y D E+ + + + +++SQL + + +I Sbjct: 88 GEIYTSLLAGFEPERILYTGNNVTDEELKFAVESGVRLNLDSISQLKRLSKIPEAKGMEI 147 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172 R+NP V P S+ G K ++ +E + G+ H Sbjct: 148 SFRVNPMVGAGHHDHCITGGPLSKFGIKEEEAVEVYKMAIELGFKPVGIHSHIGSGILDP 207 Query: 173 LCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRL----KE 220 F ++ K + ++I GGGI + DF +++ K Sbjct: 208 EPFMLAVRTLMDTAGKVHKEAGVEFDFIDFGGGIGIPYTPEESKLDINDFAEKIVDLYKA 267 Query: 221 FSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 E+Y + +EPG +V + + L T V I ++ + VD+ + + Sbjct: 268 KLEEYDLGTPTMCIEPGRYLVGDASVLLTKVNTIKQSYRKFAGVDAGFNTLLRPTMYGSY 327 Query: 278 SATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + + T + G C +GD+F ++ GD ++ + Y + + Sbjct: 328 HHIVSASTPLAESTQTIDIAGDVCESGDLFARERPMPEIEEGDILAILNAGAYAFSMASQ 387 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 +N P + N T ++ D +N Sbjct: 388 YNSRPKPAEVLVNNGETDVIRERETFADLFNK 419 >gi|126666600|ref|ZP_01737578.1| diaminopimelate decarboxylase [Marinobacter sp. ELB17] gi|126628988|gb|EAZ99607.1| diaminopimelate decarboxylase [Marinobacter sp. ELB17] Length = 416 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 120/382 (31%), Gaps = 24/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + +N + A+K + + D L + G S E Sbjct: 26 GTPAYVYSRATLERHYRAYDNALQNHPHLVCYAVKANSNLAVLDVLARLGAGFDIVSAGE 85 Query: 63 V-MLGHEKFGGETHAYNV-AYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ + A+ + +L++ A +L Sbjct: 86 LERVIRAGGNPAKVVFSGVGKQPWEMRRALEVGVRCFNVESDIELDRLNAIAGELGVKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + +V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIDIEVAPAIYARAASLPHLDVRGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L + + +I+ + LGGG+ T D + ++ + Sbjct: 206 TVAPFLDALDRVLALVDKLAEQGVEIKHLDLGGGLGVTYNDETPPQPGEYVEAILARLGD 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283 + + LEPG +I N L T V + I+D+++ + L A + Sbjct: 266 RKLELILEPGRSIAANAGVLLTRVEFLKCTEHRNFAIIDAAMNDLIRPALYGAWQAIVPV 325 Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G C GD G+ + GD ++ Y + +N N Sbjct: 326 APHSNGDEKAWDLVGPVCETGDFLGKDRQLS-LNAGDLLAVRSAGAYGFVMSSNYNTRNR 384 Query: 340 PTIAVKNVDGTIKAIREFSYND 361 P + + D R + + Sbjct: 385 PPELMVDGDQVHVVRRRETVEE 406 >gi|307292863|ref|ZP_07572709.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1] gi|306880929|gb|EFN12145.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1] Length = 390 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 113/373 (30%), Positives = 187/373 (50%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ + NL I AG+K+L ALK F+ W + + +Y+DG +S +Y Sbjct: 19 VPSPAFVVDEAAVRRNLSVLRDIGDRAGIKVLGALKAFSMWSLGPVIAEYLDGVCASGIY 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-----HK 116 E L HE++ GE Y AYK ++ +L D +IFN+ Q+ + + ++ + Sbjct: 79 EARLAHEEYRGEIATYCAAYKPEDLAEILKISDHVIFNSPGQIARLRPVIEEARLNGVNF 138 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 IGLRINP + + DP++P SRLG ++ V+GL HN CE Sbjct: 139 DIGLRINPLHAEGEVPKYDPSQPHSRLGFPIDQLRPEHLEGVDGLHVHNLCEQDFLPLER 198 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + H ++W++ GGG H T DY + L+ + +++Y+EPGEA Sbjct: 199 TWAAIESRVMLHVG-GLKWLNFGGGHHVTRADYQIDLLIAFLQRIKAQTGLELYIEPGEA 257 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT-GPYTAMVCGR 295 + + L +LD+ +N + I D S H+PD + + + G Sbjct: 258 MALDAGILIGEILDVIDNGMPVAITDISATCHMPDVIEAPYRPAMLHEGLEGQPTRLGGP 317 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354 SCLAGDI G++ G RI+F D A Y++ + N FNG+ +P+I + + + +K I Sbjct: 318 SCLAGDIIGDYRVPGGATPGRRIAFLDQAHYSMVKTNTFNGVPLPSIWLWHSETDELKQI 377 Query: 355 REFSYNDYYNNLS 367 R+FSY D+ + LS Sbjct: 378 RQFSYEDFKSRLS 390 >gi|108802931|ref|YP_642868.1| diaminopimelate decarboxylase [Rubrobacter xylanophilus DSM 9941] gi|108764174|gb|ABG03056.1| diaminopimelate decarboxylase [Rubrobacter xylanophilus DSM 9941] Length = 416 Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 57/383 (14%), Positives = 106/383 (27%), Gaps = 21/383 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + A+K + L G S E Sbjct: 26 GTPAYVYSYAALERAYREVEEAFSGLDHLVCFAVKANGNLAVLRALASLGAGADIVSGGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + F + + K + + +L + A K+ Sbjct: 86 LYRAMRAGFDPKKVVFAGVGKTEQELKAGLGERILMFNVESAGELEHLERLAHLHGKRAR 145 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 LRINP V S+ G + + ++ G+ H + Sbjct: 146 VALRINPGVDPGTHEHISTGNVESKFGIPADEALSLAERAKGFRCVDLIGVHQHIGSQIV 205 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224 + ++ E I ++++GGG+ +D + ++ Sbjct: 206 KVAPYVESVERSAALVDELRSRGFDIRYLNIGGGLGIRYRDEETPSPAELVEAIRPTLAA 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283 +I E G I L T VL + + IV D+ + + L + Sbjct: 266 SGAKILCEMGRYIAGPAGALLTGVLYRKRSGERSFIVADAGMNDLIRPSLYGAYHEVLPL 325 Query: 284 NTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + G A + G C +GD + GD ++ + Y + + +N P Sbjct: 326 DEGADQTRADLVGPVCESGDFLARDRDLPDAREGDVLAVMNAGAYGFSMASNYNSRPRPA 385 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + D Y D Sbjct: 386 EVLVREDRWAVVREREHYPDLIR 408 >gi|116747509|ref|YP_844196.1| diaminopimelate decarboxylase [Syntrophobacter fumaroxidans MPOB] gi|116696573|gb|ABK15761.1| diaminopimelate decarboxylase [Syntrophobacter fumaroxidans MPOB] Length = 434 Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 58/385 (15%), Positives = 116/385 (30%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ LL++ + ++K + + G S Sbjct: 35 VGTPCYVYSHATLLHHFTVFDSAFEGVPHLTCFSVKANSNLAVLRLFGSLGGGVDIVSGG 94 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ + Y+ K E N + +L +A Sbjct: 95 ELYRARQAGIAPDKIVYSGVGKTLEEIDYALRENILMFNIESTQELEAINARAAAFGCRA 154 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC-- 167 +I LR+NP V + ++ G + +++ V G+ H Sbjct: 155 RIALRVNPDVDPNTHPYISTGMKKNKFGIEIDSAVKAYERARSLDHVEVVGVDCHIGSQL 214 Query: 168 -ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSE 223 E F+ L+ + ++ I+++ LGGG+ + + + + + Sbjct: 215 TEISPFVDALKRLRLLIEKLEAVGITIQYLDLGGGLGIVYDQEAPPEPREYARAILRELK 274 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES---A 279 + EPG IV N L VL +I D+++ + L Sbjct: 275 GMHCTLIFEPGRVIVGNAGVLLARVLYTKRTQSKSFIITDTAMNDLIRPSLYGSYHQVQP 334 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + V G C +GD + V+ GD ++ Y + +N Sbjct: 335 LRRQSRESHIVDVVGPICESGDFIAKDRGLPMVESGDFLAVMSAGAYGFTMSSNYNSRPR 394 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + D R +++D Sbjct: 395 AAEVLVKDDRYFVIRRRETWDDLIQ 419 >gi|329955138|ref|ZP_08296095.1| carboxynorspermidine decarboxylase [Bacteroides clarus YIT 12056] gi|328526137|gb|EGF53156.1| carboxynorspermidine decarboxylase [Bacteroides clarus YIT 12056] Length = 393 Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 119/373 (31%), Positives = 189/373 (50%), Gaps = 9/373 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL + AGV+++LA K FA W F +Y++ +T+SS+YE Sbjct: 22 PSPCYIMEEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 81 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120 L E+FG + H Y+ AY + + ++ I FN++ Q +F A G+ Sbjct: 82 ARLALEEFGSKAHTYSPAYTEADFSEIMRCSSHITFNSLVQFKRFYPMIQAGGQGISCGI 141 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G + + ++G H +CE+ S+ L+ Sbjct: 142 RVNPEYSEVETELYNPCAPGTRFGVMAGQLPDVLPQGIDGFHCHCHCESSSYE-LERTLE 200 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239 ++E +F + QI+W++LGGG T KDY V+ + L+ E+Y I LEPG A Sbjct: 201 HLEAKFSRWFPQIKWLNLGGGHLMTRKDYDVEHLIRLLRGLKERYPHLNIILEPGSAFTW 260 Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCG 294 T L + V+DI EN + + S H+PD L + G Y + G Sbjct: 261 QTGVLTSEVVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAETGDGGAYVYRLGG 320 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G + F+ + IG+RI FED+ Y + N FNGI+ P IA+ +G Sbjct: 321 NSCLSGDYMGLWSFDHELHIGERIVFEDMIHYTTVKTNMFNGIHHPAIAMWTKEGKADIF 380 Query: 355 REFSYNDYYNNLS 367 + FSY DY + +S Sbjct: 381 KLFSYEDYRDRMS 393 >gi|261369009|ref|ZP_05981892.1| carboxynorspermidine decarboxylase [Subdoligranulum variabile DSM 15176] gi|282568883|gb|EFB74418.1| carboxynorspermidine decarboxylase [Subdoligranulum variabile DSM 15176] Length = 402 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 118/378 (31%), Positives = 186/378 (49%), Gaps = 14/378 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP YL+D+ L N + G K+LLA K F+ + ++ L + GT +S L+ Sbjct: 24 LPTPCYLLDEGALARNGQILGDLAARTGCKVLLAQKAFSNYDLYPVLAPCLAGTEASGLF 83 Query: 62 EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E LG E+ G E H + AY++ E+ +L D I+FN+ +QL KF A+ K +GL Sbjct: 84 EARLGAEEMPGKEVHVFCAAYREDEMAELLRWADHIVFNSPAQLAKFGPMAKAAGKSVGL 143 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173 R+NP S + DP P SRLG + ++ ++GL FH CE Sbjct: 144 RVNPECSTQEGHAIYDPCAPGSRLGTTRAQWDAAVAEHPALPDLLDGLHFHTLCEQD-AD 202 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + L + +F + +++W+++GGG H T Y V + + + V +YLEP Sbjct: 203 ALAVTLDAVAAKFRDLLPRMQWLNMGGGHHITRPGYDVATLEKCIARAQADWGVTVYLEP 262 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN----TGPY 288 GEA N T VLD+ N V + D+S H+PD + + + P Sbjct: 263 GEACALNAGYFLTRVLDVVHNGDTTVAILDASAACHMPDVIEMPYRPPLLGSADAGEKPC 322 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 T + G +CLAGD+ G++ F+ + GD + F D+A Y + N FNG+ +P I + D Sbjct: 323 TVRLAGPTCLAGDVIGDYSFDAEPQPGDLLVFGDMAIYTTCKNNTFNGMPLPAIWTRGAD 382 Query: 349 GTIKAIREFSYNDYYNNL 366 GT + + +F Y D+ L Sbjct: 383 GTCRELVQFGYRDFKVRL 400 >gi|212692988|ref|ZP_03301116.1| hypothetical protein BACDOR_02489 [Bacteroides dorei DSM 17855] gi|237725614|ref|ZP_04556095.1| carboxynorspermidine decarboxylase [Bacteroides sp. D4] gi|212664457|gb|EEB25029.1| hypothetical protein BACDOR_02489 [Bacteroides dorei DSM 17855] gi|229436301|gb|EEO46378.1| carboxynorspermidine decarboxylase [Bacteroides dorei 5_1_36/D4] Length = 387 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 124/382 (32%), Positives = 192/382 (50%), Gaps = 17/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++D+ L NL + AGV+++LA K FA W F +Y+ TT+SS+Y Sbjct: 7 VPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFPVFREYIRYTTASSVY 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIG 119 E L +E+FG + H Y+ AY D + ++ I FN+ SQ +F KA G Sbjct: 67 EARLAYEEFGSKAHTYSPAYTDTDFPVIMQCSSHITFNSFSQFRRFYSMVKASGEKISCG 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RINP S + L +P P +R G E+ + + G H +CE+ S+ L Sbjct: 127 IRINPEYSEVEVELYNPCAPGTRFGVTADLLPETLPEGIEGFHCHCHCESSSYE-LEHTL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 ++IE+ F + QI+W++LGGG T KDY + LK +Y +I LEPG A Sbjct: 186 QHIEETFARWFPQIKWLNLGGGHLMTRKDYDTEHLISLLKGLKARYPHLEIILEPGSAFT 245 Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG----------- 286 T L +V+DI EN + D S H+PD L + Sbjct: 246 WQTGPLVASVVDIVENRGIKTAILDVSFTCHMPDCLEMPYQPAVRGAEALPVDAIKTALT 305 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + G SCL+GD G + F+ P+++G+RI ED+ Y + + N FNGI+ P+IA+ Sbjct: 306 EENIYRLGGNSCLSGDYMGSWRFDHPLQVGERIVLEDMIHYTMVKTNMFNGIHHPSIAIW 365 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 + D T++ ++F Y DY + +S Sbjct: 366 HTDNTLEVYKDFRYEDYRDRMS 387 >gi|110835189|ref|YP_694048.1| diaminopimelate decarboxylase [Alcanivorax borkumensis SK2] gi|110648300|emb|CAL17776.1| diaminopimelate decarboxylase [Alcanivorax borkumensis SK2] Length = 413 Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats. Identities = 63/380 (16%), Positives = 123/380 (32%), Gaps = 22/380 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL + L + + ++ A+K + + + L + G S E Sbjct: 26 GTPLYLYSRAALERHYLAFDEAFGDHPHQVCYAVKANSNLAVLNVLARVGAGFDIVSGGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K A+ +N + ++L A +L + Sbjct: 86 LERVLRAGGDPDKIVFSGVGKTANEMAAALKANIHCFNVESAAELELLNLVAGELDREAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170 I +R+NP V ++ G + E + G+ H + Sbjct: 146 IAIRVNPDVDAQTHPYISTGLKDNKFGVDITKAPALYQRAAELPHIKILGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F A L+ + K +I + LGGG+ T D D ++ + Sbjct: 206 KLDPFEAALERVLKLLAQLQEHGIEIHHLDLGGGLGVTYDDETPPDRSDYVQALLKHIPG 265 Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYPN 284 +++EPG +I N T VL + IVD ++ + L + Sbjct: 266 ELPVHIEPGRSIAANAGIFVTQVLFLKPTEHKNFAIVDGAMNDLIRPSLYSAWQNIVPVK 325 Query: 285 TGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + G C GD G+ ++ GD ++ Y + +N N P Sbjct: 326 PHEADCRNWDIVGPVCETGDFLGKDRALA-LETGDLLAVRSAGAYGFAMASNYNSRNRPA 384 Query: 342 IAVKNVDGTIKAIREFSYND 361 + + D + +Y++ Sbjct: 385 EVMVDGDQAFVVRQRETYDE 404 >gi|313682087|ref|YP_004059825.1| carboxynorspermidine decarboxylase [Sulfuricurvum kujiense DSM 16994] gi|313154947|gb|ADR33625.1| carboxynorspermidine decarboxylase [Sulfuricurvum kujiense DSM 16994] Length = 381 Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats. Identities = 132/371 (35%), Positives = 207/371 (55%), Gaps = 8/371 (2%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ ++ L NL +++ +G K++LALK FA W F + +Y+ G T+S L+E Sbjct: 12 TPCYICEEALLEKNLQVMERVQRESGAKIILALKGFAMWSTFPLVAKYLHGCTASGLHEA 71 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLR 121 L EK E H Y+ A+KD +ID + D I+FN+ +Q +++ D+ + + LR Sbjct: 72 KLAREKMNKEVHTYSPAFKDEDIDEIARISDDIVFNSPAQFHRYYDRVKSINPNISVSLR 131 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S S L +P +SRLG + ES + ++GL FH CE +L+ Sbjct: 132 VNPEYSSSPVDLYNPCGVYSRLGTTLANFDESIVGKLDGLNFHALCEQN-VDALEGVLEA 190 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 E +FG FI +++++ GGG H T DY V+ ++ F +++ +YLEPGEA+ Sbjct: 191 FEAKFGPFIDGLKYVNFGGGHHITRVDYDVERLIDVIRAFKARHNDITVYLEPGEAVGWQ 250 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296 T L +VLDI N ++ I+D+S EAH+PD L A + + +T G + Sbjct: 251 TGPLVASVLDIVRNGMDIAILDTSAEAHMPDTLAMPYRAMVRGSGEAGEKAHTYRFGGNT 310 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGDI G++ F++P+K+GD+I FED Y + FNGI +P++A+ +G +K + Sbjct: 311 CLAGDIMGDYSFDEPLKVGDKIIFEDQIHYTFVKNTTFNGIKLPSLAIWTKEGELKMVHA 370 Query: 357 FSYNDYYNNLS 367 F Y DY N LS Sbjct: 371 FGYEDYRNRLS 381 >gi|30249905|ref|NP_841975.1| Orn/DAP/Arg decarboxylase family protein [Nitrosomonas europaea ATCC 19718] gi|30180942|emb|CAD85868.1| Orn/DAP/Arg decarboxylases family 2 [Nitrosomonas europaea ATCC 19718] Length = 417 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 58/384 (15%), Positives = 113/384 (29%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + + + L + G S E Sbjct: 29 GTPCYVYSSAAIRTTYQIFDHAFGQRDHLICYAVKANSNLAILNLLARLGSGFDIVSGGE 88 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ + A+ +N + +L + A ++ K Sbjct: 89 LQRVLKAGGDPQKTVFSGVGKTPEEIRAALAANILCFNVESEMELMVLNEIAGQMGKIAP 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V + ++ G + V+GL H + Sbjct: 149 VSLRVNPDVDANTHPYISTGMKENKFGIPAAEAGRIYSLAHQLPHIQVSGLDCHIGSQLT 208 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS---EK 224 F + I+ + LGGG+ +K E Sbjct: 209 EIAPFIEAADKMLDLLARLQTMGVTIKHLDLGGGLGIRYDRESPPSIEAYIKALCTIAEN 268 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + Q+ +EPG ++V N L T V + + + + LYQ +I P Sbjct: 269 HPQQLLIEPGRSMVGNAGLLLTRVHYLKHTSHRNFAIVDAAMNDMLRPALYQAYHSILPV 328 Query: 285 TGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T T + G C GD G + D ++ Y ++ + +N Sbjct: 329 TKRTGETKTYQIVGPVCETGDFLGHDRNLA-LTKNDLLAVMSAGAYGMSMSSNYNTRPRA 387 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + D Y Sbjct: 388 AEVMVDGSTVHLIRARETVEDLYA 411 >gi|242279430|ref|YP_002991559.1| diaminopimelate decarboxylase [Desulfovibrio salexigens DSM 2638] gi|242122324|gb|ACS80020.1| diaminopimelate decarboxylase [Desulfovibrio salexigens DSM 2638] Length = 412 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 71/387 (18%), Positives = 124/387 (32%), Gaps = 22/387 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + + ++K + + L + G S E Sbjct: 26 GTPLYIYSAATLRRHFEAFDSAFTGLDHMTCYSVKANSNLSVLKLLAEMGAGMDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K A D +V ++++ + A+ ++K Sbjct: 86 LFRALKAGVPASKIVFSGVGKKAYEIAEALKADILMFNVESVGEMHRINEVAESMNKTAR 145 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170 + RINP V ++ G + E+ G+ H + Sbjct: 146 ISFRINPDVDPKTHPYISTGMKKNKFGLDMETAKEAYKTAKELSNVSPIGMDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + F L E G +IE + LGGG+ T + F + L + Sbjct: 206 TIEPFLEALDKLLAFRDELGAMGIEIEHLDLGGGLGITYDEEEPPHPKEFGEALSKALAD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLL--YQESATI 281 +++ LEPG I N L V+ + IVD+++ V L Y A + Sbjct: 266 KGLKVILEPGRVIAGNAGILVGEVIYTKKTPTKDFLIVDAAMNDLVRPSLYQSYHRIAEV 325 Query: 282 YPNTGPY-TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 N P V G C +GD + +K G+ I+ Y + +N Sbjct: 326 TQNNRPEIDYDVVGPICESGDFLAKDRMLPEMKQGELIAVFSAGAYGFTMSSNYNSRLRA 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + D I A R +Y D S Sbjct: 386 AEIIVDGDDVIMARRRETYEDLLRLES 412 >gi|52548561|gb|AAU82410.1| diaminopimelate decarboxylase [uncultured archaeon GZfos17C7] Length = 425 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 71/395 (17%), Positives = 130/395 (32%), Gaps = 32/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ KL NN + + + + A+K + L G S Sbjct: 23 GTPLYVTDENKLRNNFKSYKNAFETTNIDTDIYYAVKANGNLALLKILASEGAGADVFSA 82 Query: 61 YEVMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ L E +N D ++ + + + ++V +L A +L Sbjct: 83 GELELTKLAGIPAEKILFNGNSKSDDDLKEAVESGVRVSVDSVDELRALSAVANELGREV 142 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169 +I +R+NP VS S+ G C++ + + GL H + Sbjct: 143 EIAIRVNPDVSPDVHAKIATGLKESKFGIPFHDVIPVCEEAEKLPNVLLAGLHCHIGSQI 202 Query: 170 KSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKE 220 F + + +++++ LGGG+ + +D + + Sbjct: 203 LDISVFGEATEKMMALVERMYERGMKLKFVDLGGGLGIGYRQEEKATAPTPEDLAEMILP 262 Query: 221 FSEKYSVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274 E + LEPG +IV +T L + V + KN V +D+ + + Sbjct: 263 LFENKIRDLGISLKLVLEPGRSIVGASTILLSRVNAVKRANKNFVAIDAGFNLLIRPVMY 322 Query: 275 YQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + N V G C +GDI + V+ GD ++ D Y + Sbjct: 323 GAYHEVVVANKVNERASELYTVVGNVCESGDIMAKDRMLPKVERGDLVAILDTGAYGFSM 382 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +NG + S D N Sbjct: 383 SSQYNGRPRCAEVLVCNGKADLIRSRESIEDLIRN 417 >gi|262381916|ref|ZP_06075054.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_33B] gi|262297093|gb|EEY85023.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_33B] Length = 379 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 131/373 (35%), Positives = 198/373 (53%), Gaps = 9/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y++++ L NNL +++ AGV ++LA K FA W F + +Y+ +T+SS + Sbjct: 7 IPSPCYVMEENLLRNNLSLIKSVKERAGVNIILAFKAFALWKAFPIVREYIPFSTASSKF 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E L E+ G H Y+ AY + + +L + FN++SQ ++F A G Sbjct: 67 EAQLAFEEMGSPAHTYSPAYTEADFPLILRYSSHVTFNSLSQFHRFYPMVRADGNRVSCG 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRINP S + L +P P SR+G ++ + + GL FH CE+ S+ L Sbjct: 127 LRINPEYSDVETDLYNPCAPGSRMGVTGDLLGDTLPEGIEGLHFHTLCESTSYD-LERTL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 +E+ FG F+ ++W+++GGG T KDY V+ LK F E+Y ++ +EPG A Sbjct: 186 AEVERRFGRFLPHVKWLNMGGGHLMTRKDYDVEHLIALLKGFKERYPNLELIMEPGSAFA 245 Query: 239 TNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVC 293 T L TTV+DI EN I+D+S H+PD L I G T + Sbjct: 246 WQTGFLLTTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYKPAIRFATDAVEGKPTYRIG 305 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G SCL+GD G++ F+KP+ IGD++ FED+ Y I + N FNGI P++A+ N D + Sbjct: 306 GNSCLSGDYMGDWSFDKPLAIGDKLIFEDMIHYTIVKTNMFNGIPHPSLALWNKDDQLVV 365 Query: 354 IREFSYNDYYNNL 366 R F Y DY N + Sbjct: 366 YRTFGYEDYKNRM 378 >gi|237752091|ref|ZP_04582571.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter winghamensis ATCC BAA-430] gi|229376658|gb|EEO26749.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter winghamensis ATCC BAA-430] Length = 415 Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats. Identities = 68/383 (17%), Positives = 120/383 (31%), Gaps = 21/383 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D +++ + + ALK + + L G SL E Sbjct: 27 GTPLYVYDLERIEARFNALKQAFAGRKALVCYALKANSNLSVIKKLASLESGADCVSLGE 86 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK----LHKK 117 + Y+ K + + N S+ + +A + + Sbjct: 87 IKRAVMAGIPKYKIIYSGVGKQDFEIKEAISLGILFINVESKEEMLRVEACARELGISAR 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 I +R+NP + ++ G ++ +E G+ FH + Sbjct: 147 ISIRVNPDIDPQTHPYISTGLKENKFGVSIEEAKGMYLHAHNAEFLEPIGIHFHIGSQLT 206 Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 + + I + + I++ +GGGI T D D+ Q + Sbjct: 207 KLKPIAESAQKIAQLTQSLLALKIDIKFFDIGGGIGITYSDESTISPYDYAQAILAELRG 266 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL--YQESATI 281 V I EPG IV N+ T VL K VIVD ++ + L Y + + Sbjct: 267 LDVTIVCEPGRFIVGNSGVFLTKVLYQKENQGKRFVIVDGAMNDLIRPSLYAAYHQILAL 326 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 A V G C +GD G+ + GD ++ Y + + +N Sbjct: 327 KNMESKGEAEVAGPICESGDYLGKNIVLPHCERGDILAVLSAGAYGFSMASNYNTRPRCA 386 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 V + S+ D Sbjct: 387 EVVVENGKIRLVRKRESFEDLIA 409 >gi|326387667|ref|ZP_08209273.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium nitrogenifigens DSM 19370] gi|326207713|gb|EGD58524.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium nitrogenifigens DSM 19370] Length = 393 Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats. Identities = 120/376 (31%), Positives = 186/376 (49%), Gaps = 11/376 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D L NL IR AG+KLL ALK F+ W + + Y+DG +S L+ Sbjct: 19 VDSPAFVVDAAALRRNLGVLADIRDRAGIKLLSALKAFSMWKVAPLVGDYLDGVCTSGLW 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-----AQKLHK 116 E L E + GE Y YK ++ + D +IFN+ Q+ +F D A+ Sbjct: 79 EAKLADEHYSGEIATYCAGYKAQDLPEICELSDHVIFNSPGQIARFADVLATARARGCSF 138 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 +GLRINP + + DP P SRLG ++ ++ V G+ FH CE F + Sbjct: 139 DVGLRINPLHAEGEVPRYDPCAPHSRLGFPISQLTQAHLEGVKGIHFHTLCEQD-FEPLA 197 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 +++ + Q+EW++ GGG H T DY + + LK + +IYLEPGEA Sbjct: 198 RTWDAVKERLKPYFGQLEWLNFGGGHHITRADYQRDELVEFLKSVKAETGCEIYLEPGEA 257 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMV 292 + + L TVLD EN + I D S H+PD L + G + + Sbjct: 258 VALDAGILVGTVLDRHENGMPIAITDISATCHMPDVLEAPYRPAMLGEWGEGSGETAVRL 317 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTI 351 G SCLAGD+ G++ P + G R +F D A Y++ + FNG+ +P+I + + + Sbjct: 318 GGPSCLAGDVIGDYRLPVPCEPGVRFAFLDQAHYSMVKTTTFNGVPLPSIWLWDSESDVL 377 Query: 352 KAIREFSYNDYYNNLS 367 + +R FSY D+ + LS Sbjct: 378 ECVRSFSYEDFRDRLS 393 >gi|70733296|ref|YP_263070.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf-5] gi|68347595|gb|AAY95201.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf-5] Length = 415 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 119/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYQAYAQALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G + ++ +D A+ + +L + + A +L Sbjct: 86 LERVLAAGGQADKIVFSGVGKTRDDMRRALEVGVHCFNVESAEELERLQLVAAELGVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + + G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIDIATAEDVYIRAAQLPNLEIVGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L ++ G + I LGGG+ +D +K E+ Sbjct: 206 TLEPFIDALDRLLDLVDRLGECGIYLRHIDLGGGLGVRYRDEEPPLAADYVKAVRERLDG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD ++ + L A Sbjct: 266 RDLALVFEPGRFIVANAGVLLTRVEYLKHTEHKDFAIVDGAMNDLIRPALYQAWMDVSAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 +T P T + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDTEPRTYDIVGPICETGDFLAKERTLA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D ++ R + + + Sbjct: 385 AEVLVDGDQAVEVRRRETVAELFA 408 >gi|254420585|ref|ZP_05034309.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Brevundimonas sp. BAL3] gi|196186762|gb|EDX81738.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Brevundimonas sp. BAL3] Length = 392 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 124/373 (33%), Positives = 189/373 (50%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ + NL + ++LLALK F+ W + D + +Y+DG +S L+ Sbjct: 21 VPSPAFVVDEVAVRRNLSVLQDVGTRGNARVLLALKAFSMWSLADVVGEYLDGVCASGLW 80 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-----AQKLHK 116 E L E + G Y+ AYK ++ +L DT+IFN Q+ +F D A Sbjct: 81 EARLAREFYHGHLTTYSPAYKPADLPEILRLSDTVIFNAPDQIARFADLIAAARAGGETF 140 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 IGLR+NP S + DP + SRLG ++ V+GL H CE F Sbjct: 141 DIGLRLNPEHSEGQVAKYDPCQLGSRLGFPVSQLTPEHLQGVDGLHIHALCEQG-FEPLK 199 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + +E + + ++WI+LGGG H T DY + LK+ E+Y +Q+Y+EPGEA Sbjct: 200 RIWAAVEPKLTPLLPDLKWINLGGGHHVTRADYRIDALVGFLKDLGERYGLQVYIEPGEA 259 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN-TGPYTAMVCGR 295 I + L VLD N + I D S H+PD + + G T + G Sbjct: 260 IALDAGILVGEVLDTFHNGLPIAITDISATCHMPDVIEAPYRPAMLNEAEGGVTYRLGGP 319 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354 SCLAGDI G++ F G RI+F D A Y++ + N FNG+ +P IA+ N D +K + Sbjct: 320 SCLAGDIIGDYGFTTAPTAGTRIAFLDQAHYSMVKTNTFNGVPLPAIALWNSDTDALKLV 379 Query: 355 REFSYNDYYNNLS 367 REF Y+++ + LS Sbjct: 380 REFDYSEFRDRLS 392 >gi|198275888|ref|ZP_03208419.1| hypothetical protein BACPLE_02063 [Bacteroides plebeius DSM 17135] gi|198271517|gb|EDY95787.1| hypothetical protein BACPLE_02063 [Bacteroides plebeius DSM 17135] Length = 388 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 120/381 (31%), Positives = 188/381 (49%), Gaps = 17/381 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y++++ L NL ++ AGV+++LA K FA W F +Y+ TT+SS Y Sbjct: 8 IPSPCYVMEEDLLRKNLTLIKHVADTAGVEIILAFKAFAMWKSFPIFREYIRYTTASSEY 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIG 119 E L E+FG + H Y+ AY A L I FN++SQ +F A H G Sbjct: 68 EARLAFEEFGSKAHTYSPAYTAQNFPAFLKYSSHITFNSLSQFERFYPLAKAYPEHVSCG 127 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+NP S + L +P P +R G + + + G H +CE+ S+ L Sbjct: 128 IRVNPEYSEVEVELYNPCAPGTRFGVTADLLPKQLPEGIEGFHCHCHCESSSYE-LERTL 186 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 ++IE++F + Q++W++LGGG T DY V L+ +Y QI LEPG A Sbjct: 187 QHIEEKFSRWFPQLKWLNLGGGHLMTRADYDVDHLIGLLQGLKSRYPHLQIILEPGSAFT 246 Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT------------ 285 T L +V+D+ E+ + D S H+PD L + Sbjct: 247 WQTGPLVASVVDVVESRGIRTAILDVSFTCHMPDCLEMPYQPRVRNAESLPAEAVKTAAR 306 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + + G SCL+GD G + F+ +++G+RI FED+ Y + + N FNGI+ P+IA+ Sbjct: 307 EEHVYRLGGNSCLSGDYMGSWKFDHELQVGERIVFEDMIHYTMVKTNMFNGIHHPSIALL 366 Query: 346 NVDGTIKAIREFSYNDYYNNL 366 + DG ++ R F Y DY + + Sbjct: 367 HADGELEVYRTFHYEDYRDRM 387 >gi|94497589|ref|ZP_01304158.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas sp. SKA58] gi|94423006|gb|EAT08038.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas sp. SKA58] Length = 390 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 117/373 (31%), Positives = 185/373 (49%), Gaps = 8/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D+ + NL I AG+K+L ALK F+ W + + +Y+DG +S +Y Sbjct: 19 VPSPAFVVDETAIRRNLSILRDIGDRAGIKVLGALKAFSMWSLGPVIGEYLDGVCASGIY 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-----HK 116 E LG E++ GE Y AYK ++ +L D +IFN+ Q+ + K + Sbjct: 79 EARLGREEYRGEVATYCAAYKPDDLAEILRISDHVIFNSPGQIARLKPVIDAARKDGVNF 138 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 IGLR+NP + + DP++P SRLG ++ V+GL HN CE Sbjct: 139 DIGLRLNPLHAEGEVPKYDPSQPHSRLGFPVDQLRPEHLEGVDGLHIHNLCEQDFLPLQR 198 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 IE + ++W++ GGG H T DY + D L+ + + +Y+EPGEA Sbjct: 199 TWTA-IESRVMPHVANLKWLNFGGGHHVTRADYQIDDLVAFLQTIKAQTGLDLYIEPGEA 257 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA-MVCGR 295 + + L +LD+ +N + I D S H+PD + + + G Sbjct: 258 MALDAGILVGEILDVIDNGMPVAITDISATCHMPDVIEAPYRPAMLHEDSNGPVTRLGGP 317 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354 SCLAGDI G++ + G RI+F D A Y++ + N FNG+ +P+I + N D +K I Sbjct: 318 SCLAGDIIGDYRVPGGAEPGARIAFLDQAHYSMVKTNTFNGVPLPSIWLWNSDTDELKEI 377 Query: 355 REFSYNDYYNNLS 367 R FSY D+ LS Sbjct: 378 RSFSYADFKARLS 390 >gi|77461719|ref|YP_351226.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf0-1] gi|77385722|gb|ABA77235.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf0-1] Length = 415 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 64/384 (16%), Positives = 116/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYLAYADALAGMPHLVCFAVKANSNLGVLNVLARIGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ +D A+ + +L + + A +L Sbjct: 86 LERVLAAGGSPDKIVFSGVGKTRDDMRRALEVGVHCFNVESTDELERLQVVAAELGVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 I LR+NP V ++ G D V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYVRAAHLPNLEVVGVDCHIGSQLT 205 Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 FL L ++ G + I LGGG+ +D +K E+ Sbjct: 206 TLPPFLDALDRLLDLVDRLGDCGIHLRHIDLGGGLGVRYRDEEPPLAADYIKAVRERLVG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L Sbjct: 266 RDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T T V G C GD + ++ GD ++ Y + +N Sbjct: 326 KPRETAARTYDVVGPICETGDFLAKERELA-LEEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + R + + + Sbjct: 385 AEVLVDGDQAFEVRRRETVAELFA 408 >gi|332885338|gb|EGK05589.1| carboxynorspermidine decarboxylase [Dysgonomonas mossii DSM 22836] Length = 393 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 126/375 (33%), Positives = 192/375 (51%), Gaps = 10/375 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P ++++++ L NNL ++ AGV ++LA K +A W F + +Y+ +T+SS+Y Sbjct: 20 VPSPCFVMEEELLRNNLSLIKSVKDRAGVNIILAFKAYAMWKSFPIIREYIPCSTASSVY 79 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119 E L +E+ G H + AY + I FN++SQ ++F G Sbjct: 80 EAQLAYEEMGSLAHTFTPAYTSENFPLFMRYSSHITFNSLSQFDRFYPETLKHSHKVSCG 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRINP S + L +P P SRLG + + + GL FH CE+ S+ L Sbjct: 140 LRINPEYSTVETDLYNPATPGSRLGVSLDQLGDKLPEGLEGLHFHTLCESSSYD-LEKTL 198 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 + IE++FGH ++Q++W ++GGG T KDY V+ L+ F K+ +I +EPG A Sbjct: 199 EVIEQKFGHLLSQVKWFNMGGGHLMTRKDYDVEHLIGLLQSFKAKHPNLEIIMEPGSAFA 258 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYPNTGPY-----TAMV 292 T L +TV+DI EN + H+PD L I T + Sbjct: 259 WQTGVLVSTVVDIVENRGIKTAILDVSFACHMPDCLEMPYKPHIRGAYHEPVQGLPTYRM 318 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G SCL+GD GE+ F++P+ IGD+I FED+ Y I + FNGI+ P IA+ N ++ Sbjct: 319 GGSSCLSGDFVGEWSFDEPLLIGDKIIFEDMIHYTIVKTTMFNGISHPAIALWNKSNQLE 378 Query: 353 AIREFSYNDYYNNLS 367 REFSY DY +S Sbjct: 379 IYREFSYEDYKTRMS 393 >gi|52549770|gb|AAU83619.1| diaminopimelate decarboxylase [uncultured archaeon GZfos32E4] Length = 425 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 71/395 (17%), Positives = 130/395 (32%), Gaps = 32/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ KL NN + + + + A+K + L G S Sbjct: 23 GTPLYVTDENKLRNNFKSYKNAFETTNIDTDIYYAVKANGNLALLKILASEGAGADVFSA 82 Query: 61 YEVMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ L E +N D ++ + + + ++V +L A +L Sbjct: 83 GELELTKLAGIPAEKILFNGNSKSDDDLKEAVESGVRVSVDSVDELRALSAVANELGREV 142 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169 +I +R+NP VS S+ G C++ + + GL H + Sbjct: 143 EIAIRVNPDVSPDVHAKIATGLKESKFGIPFHDVIPVCEEAEKLPNVLLAGLHCHIGSQI 202 Query: 170 KSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKE 220 F + + +++++ LGGG+ + +D + + Sbjct: 203 LDISVFGEATEKMMALVERMYERGMKLKFVDLGGGLGIGYRQEEKATAPTPEDLAEMILP 262 Query: 221 FSEKYSVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274 E + LEPG +IV +T L + V + KN V +D+ + + Sbjct: 263 LFENKIRDLGISLKLVLEPGRSIVGASTILLSRVNAVKRANKNFVAIDAGFNLLIRPVMY 322 Query: 275 YQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + N V G C +GDI + V+ GD ++ D Y + Sbjct: 323 DAYHEVVVANKVNERASELYTVVGNVCESGDIMAKDRMLPKVERGDLVAILDTGAYGFSM 382 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +NG + S D N Sbjct: 383 SSQYNGRPRCAEVLVCNGKADLIRSRESIEDLIRN 417 >gi|304315452|ref|YP_003850599.1| diaminopimelate decarboxylase [Methanothermobacter marburgensis str. Marburg] gi|302588911|gb|ADL59286.1| diaminopimelate decarboxylase [Methanothermobacter marburgensis str. Marburg] Length = 428 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 66/391 (16%), Positives = 129/391 (32%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID+ ++ N + ++ A K + L + G + S Sbjct: 28 GTPLYVIDEMRIRENYRRLHRAFSRNYSDFQVFYACKANTNLAVMRILEEEGSGIDAVSP 87 Query: 61 YEVMLGH-EKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + F E Y +D E+ L I ++ SQL + + A + ++ Sbjct: 88 GEIYIALMAGFDPERILYTGNNVRDDELQFALEAGVRINIDSRSQLLRLAEMAPE-GLEV 146 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172 R+NP V S+ G + E ++ G+ H Sbjct: 147 SFRVNPLVGAGHHEHCITGGEMSKFGIMESEAPEVYSLALDLGLKPVGIHAHIGSGILDP 206 Query: 173 LCFSAMLKNIEKE----FGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224 F ++++ G + E+I GGG+ + + +F R+ + Sbjct: 207 EPFMLAVESLMDIAGRVHGETGIEFEFIDFGGGLGIPYTPDEEPLDIDEFASRITGLFKD 266 Query: 225 Y-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 + LEPG IV + + L T V + E+ + VD+ + + Sbjct: 267 KLSDYGLGRPVMCLEPGRYIVGDASYLLTRVNTVKESYRKFAGVDAGFNTLLRPAMYGSY 326 Query: 278 SATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + + + G C +GD+F V GD ++ + Y+ + + Sbjct: 327 HHILVADRPLAGPSGKIDIAGNVCESGDLFARDRPMSEVNEGDILAIMNAGAYSFSMASQ 386 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 +N P + R ++ D Sbjct: 387 YNSRPRPAEVLVRDGDAEVVRRRETFADLLA 417 >gi|258405461|ref|YP_003198203.1| diaminopimelate decarboxylase [Desulfohalobium retbaense DSM 5692] gi|257797688|gb|ACV68625.1| diaminopimelate decarboxylase [Desulfohalobium retbaense DSM 5692] Length = 418 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 65/384 (16%), Positives = 115/384 (29%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + + + K + + L G S E Sbjct: 26 GTPLYIYSTATLRRHYHAFDSAFEGLDHLTCFSAKANSNLSVLRLLGDMGAGVDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK--LHKK 117 + E Y+ K D +V +L + AQ+ L + Sbjct: 86 LYRALKAGIAPEKIVYSGVGKQRHEIEQALEADILMFNCESVPELELINEVAQEKGLVAR 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 I LRINP V ++ G + + + G+ H + Sbjct: 146 ISLRINPDVDPQTHPYISTGLKKNKFGLNLEQSEEAYRLARDLPGVDPIGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF---CQRLKEFSEK 224 S F L+ +++ + I ++ LGGG+ T + + L E + Sbjct: 206 SIEPFLEALERLKRFYAKLQDMGLAIRYLDLGGGLGITYDEETPPHPQQLGEALAESLKD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---AT 280 V + LEPG I N + + VL + K+ +VD+++ V L Sbjct: 266 LDVTLILEPGRVIAGNAGIMVSKVLYTKTSEAKHFTVVDAAMNDLVRPSLYGAYHRLAEV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD + + G+ I+ Y + +N Sbjct: 326 TPQKRQELPMDIVGPICETGDFLAQDRTLPELAPGECIAAFSAGAYGFTMASQYNSRPRA 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D R +Y D Sbjct: 386 AEILVDGDQARIVRRRETYEDLIA 409 >gi|288931191|ref|YP_003435251.1| diaminopimelate decarboxylase [Ferroglobus placidus DSM 10642] gi|288893439|gb|ADC64976.1| diaminopimelate decarboxylase [Ferroglobus placidus DSM 10642] Length = 419 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 72/390 (18%), Positives = 135/390 (34%), Gaps = 29/390 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ KL N++ ++L A+K + + + G S E Sbjct: 24 GTPLYVTSYAKLKENIEAYKKAFN--WARVLYAVKANNNLAIMKVIAKENFGADVFSQGE 81 Query: 63 VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKI 118 + L F + +N + EI A + + ++V +L + A ++ +I Sbjct: 82 LYLSLLAGFDKKFILFNGNSKSEEEIKAGIESGVKFSVDSVDELYTISEIASEMGEEVEI 141 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKS 171 R+NP + S+ G + +E+ + G+ H + Sbjct: 142 AFRVNPDIDPKTHPKIATGLKKSKFGIPAEQVVETYRLALELPNVVPIGIHCHIGSQITE 201 Query: 172 FLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225 F + ++ + ++++ +GGG+ + +D LK E+ Sbjct: 202 ISPFVEAVNKIFDLAERVEELGIDLKFVDVGGGLGIDYEGKGVPTPEDLANALKPVYEER 261 Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES- 278 + +++LEPG ++V NTT L T V + KN V VD+ + + Sbjct: 262 KSRLDSNPELWLEPGRSLVGNTTILLTRVNAVKRAYKNFVAVDAGFNLLIRPAMYGAYHK 321 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 A V G C +GD+ GE V+ GD I+ D Y + +N Sbjct: 322 IAVANKMDWEEEEVYTVVGPICESGDVLGEDRKLPRVEKGDIIAVFDAGAYGFVMSSQYN 381 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 G + + S+ D Sbjct: 382 GRPRCAEVLVKGSEAYVIREKESFGDLIAK 411 >gi|150007587|ref|YP_001302330.1| carboxynorspermidine decarboxylase [Parabacteroides distasonis ATCC 8503] gi|255013886|ref|ZP_05286012.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_7] gi|298375531|ref|ZP_06985488.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_19] gi|149936011|gb|ABR42708.1| carboxynorspermidine decarboxylase [Parabacteroides distasonis ATCC 8503] gi|298268031|gb|EFI09687.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_19] Length = 379 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 129/373 (34%), Positives = 198/373 (53%), Gaps = 9/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+++++ L NNL +++ AGV ++LA K FA W F + +Y+ +T+SS + Sbjct: 7 IPSPCYVMEEKLLRNNLSLIKSVKERAGVNIILAFKAFALWKAFPIVREYIPFSTASSKF 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E L E+ G H Y+ AY + + +L + FN++SQ ++F A G Sbjct: 67 EAQLAFEEMGSPAHTYSPAYTEADFPLILRYSSHVTFNSLSQFHRFYPMVRADGNRVSCG 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRINP S + L +P P SR+G + + + GL FH CE+ S+ L Sbjct: 127 LRINPEYSDVETDLYNPCAPGSRMGVTGDLLGDKLPEGIEGLHFHTLCESTSYD-LERTL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 +E+ FG F+ ++W+++GGG T K Y V+ LK F E+Y ++ +EPG A Sbjct: 186 AEVERRFGRFLPHVKWLNMGGGHLMTRKGYDVEHLIALLKGFKERYPNLELIMEPGSAFA 245 Query: 239 TNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVC 293 T L TTV+DI EN I+D+S H+PD L I G T + Sbjct: 246 WQTGFLLTTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYKPAIRFATDAVEGKPTYRIG 305 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G SCL+GD G++ F+KP++IGD++ FED+ Y I + N FNGI P++A+ + D + Sbjct: 306 GNSCLSGDYMGDWSFDKPLEIGDKLIFEDMIHYTIVKTNMFNGIPHPSLALWSKDDQLVM 365 Query: 354 IREFSYNDYYNNL 366 R F Y DY N + Sbjct: 366 YRTFGYEDYKNRM 378 >gi|301310449|ref|ZP_07216388.1| carboxynorspermidine decarboxylase [Bacteroides sp. 20_3] gi|300832023|gb|EFK62654.1| carboxynorspermidine decarboxylase [Bacteroides sp. 20_3] Length = 379 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 131/373 (35%), Positives = 199/373 (53%), Gaps = 9/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+++++ L NNL +++ AGV ++LA K FA W F + +Y+ +T+SS + Sbjct: 7 IPSPCYVMEEKLLRNNLSLIKSVKERAGVNIILAFKAFALWKAFPIVREYIPFSTASSKF 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E L E+ G H Y+ AY + + +L + FN++SQ ++F A G Sbjct: 67 EAQLAFEEMGSPAHTYSPAYTEADFPLILRYSSHVTFNSLSQFHRFYPMVRADGNRVSCG 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRINP S + L +P P SR+G ++ + + GL FH CE+ S+ L Sbjct: 127 LRINPEYSDVETDLYNPCAPGSRMGVTGDLLGDTLPEGIEGLHFHTLCESTSYD-LERTL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 +E+ FG F+ ++W+++GGG T KDY V+ LK F E+Y ++ +EPG A Sbjct: 186 AEVERRFGRFLPHVKWLNMGGGHLMTRKDYDVEHLIALLKGFKERYPNLELIMEPGSAFA 245 Query: 239 TNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVC 293 T L TTV+DI EN I+D+S H+PD L I G T + Sbjct: 246 WQTGFLLTTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYKPAIRFATDAVEGKPTYRIG 305 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G SCL+GD G++ F+KP+ IGD++ FED+ Y I + N FNGI P++A+ N D + Sbjct: 306 GNSCLSGDYMGDWSFDKPLAIGDKLIFEDMIHYTIVKTNMFNGIPHPSLALWNKDNQLVM 365 Query: 354 IREFSYNDYYNNL 366 R F Y DY N + Sbjct: 366 YRTFGYEDYKNRM 378 >gi|52550218|gb|AAU84067.1| diaminopimelate decarboxylase [uncultured archaeon GZfos36D8] Length = 425 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 72/395 (18%), Positives = 130/395 (32%), Gaps = 32/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ KL NN + + + + A+K + L G S Sbjct: 23 GTPLYVTDENKLRNNFKSYKNAFETTNIDTDIYYAVKANGNLALLKILASEGAGADVFSA 82 Query: 61 YEVMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ L E +N D ++ + + + ++V +L A +L Sbjct: 83 GELELTKLAGIPAEKILFNGNSKSDDDLKEAVESGVRVSVDSVDELRALSAVANELGREV 142 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169 +I +R+NP VS S+ G C++ + + GL H + Sbjct: 143 EIAIRVNPDVSPDVHAKIATGLKESKFGIPFHDVIPVCEEAEKLPNVLLAGLHCHIGSQI 202 Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKE 220 F + + Q++++ LGGG+ + +D + + Sbjct: 203 LDITVFGEATEKMMALVERVYERGMQLKFVDLGGGLGIGYRQEEKATAPTPEDLAEMILP 262 Query: 221 FSEKYSVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274 E + LEPG +IV +T L + V + KN V +D+ + + Sbjct: 263 LFENKIRDLGISLKLVLEPGRSIVGASTILLSRVNAVKRANKNFVAIDAGFNLLIRPVMY 322 Query: 275 YQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + N V G C +GDI + V+ GD ++ D Y + Sbjct: 323 DAYHEVVVANKVNERASELYTVVGNVCESGDIMAKDRMLPKVERGDLVAILDTGAYGFSM 382 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +NG + S D N Sbjct: 383 SSQYNGRPRCAEVLVCNGKADLIRSRESIEDLIRN 417 >gi|253997642|ref|YP_003049706.1| diaminopimelate decarboxylase [Methylotenera mobilis JLW8] gi|253984321|gb|ACT49179.1| diaminopimelate decarboxylase [Methylotenera mobilis JLW8] Length = 416 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 67/387 (17%), Positives = 129/387 (33%), Gaps = 23/387 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ K L + K+A + A+K + + + + G S E Sbjct: 26 GSPCYVYSKAALSQAFERFSAGFKDANHLVCFAVKSNPSLAILNLFAKLGAGFDIVSGGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K + A+ + + S+L + D A + K Sbjct: 86 LARVIAAGGDPKKVVFSGVGKTAEEMRAALEAGIFCFNVESASELIRLNDVAAYMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP+V ++ G +D ++ ++G+ H + Sbjct: 146 VSLRVNPNVDAKTHPYISTGLKNNKFGVAYEDALDIYLQAAEMSNIAIHGVDCHIGSQIT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + QI+ I LGGGI D + + + ++E Sbjct: 206 ELSPFLDAFDRVLALVDALAENNIQIQHIDLGGGIGICYSDETPPEFTAYAKAMREKLGN 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 V++ EPG A+V N L T V + IVD+++ + L A Sbjct: 266 RDVKLVFEPGRALVGNAGVLLTKVEYLKPTESKNFAIVDAAMNDLMRPALYDAYHDIQAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 N + G C +GD G ++ GD ++ Y ++ + +N Sbjct: 326 APRNEAAVNYEIVGPVCESGDFLGHDRNLA-LQEGDLLAIMSAGAYGMSMSSNYNTRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + D + D + N S Sbjct: 385 AEVMVDGDQCHLIKKRELIADLFANES 411 >gi|34540015|ref|NP_904494.1| carboxynorspermidine decarboxylase [Porphyromonas gingivalis W83] gi|34396326|gb|AAQ65393.1| carboxynorspermidine decarboxylase [Porphyromonas gingivalis W83] Length = 378 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 116/372 (31%), Positives = 182/372 (48%), Gaps = 8/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y++++ L NL + GV+++LA K +A W F + +Y+ +T+SS++ Sbjct: 7 IASPAYILEEDLLRRNLSLIASVADRTGVEIILAFKAYALWRTFPIIREYVPHSTASSVW 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+ G H ++ AY E +L + FN++SQ + + +GLR Sbjct: 67 EARLAFEEMGAPAHTFSPAYTPEEFPEILRYSSHVTFNSLSQYYLLSPMVKNVGVSLGLR 126 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + L +P P SR G + ++ + + GL FH CE+ + LK Sbjct: 127 INPEYSAVETALYNPCAPGSRFGVSASELGDTLPEGIEGLHFHTLCESTGYE-LEKTLKI 185 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 IE F + Q W+++GGG T +DY V+ Q L +FS ++ + +EPG A Sbjct: 186 IEDRFASVLEQAHWLNMGGGHLMTRRDYDVEHLVQVLNDFSRRHPHLHLIMEPGSAFGWQ 245 Query: 241 TTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-----YTAMVCG 294 T L +TV+DI IVD S H+PD L I T + G Sbjct: 246 TGFLKSTVVDIVEHQGIATAIVDVSFTCHMPDCLEMPYKPVIRGAHQEPVPGLPTYRIGG 305 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SCL+GD G++ F++P+++GD + FED+ Y + FNG P I + DG + + Sbjct: 306 CSCLSGDFIGDWSFDRPLQVGDELIFEDMLHYTTVKTTMFNGARHPDIVLLRTDGKKEVL 365 Query: 355 REFSYNDYYNNL 366 R F Y DY N + Sbjct: 366 RRFDYEDYKNRM 377 >gi|256839772|ref|ZP_05545281.1| carboxynorspermidine decarboxylase [Parabacteroides sp. D13] gi|256738702|gb|EEU52027.1| carboxynorspermidine decarboxylase [Parabacteroides sp. D13] Length = 379 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 128/373 (34%), Positives = 198/373 (53%), Gaps = 9/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+++++ L NN+ +++ AGV ++LA K FA W F + +Y+ +T+SS + Sbjct: 7 IPSPCYVMEEKLLRNNVSLIKSVKERAGVNIILAFKAFALWKAFPIVREYIPFSTASSKF 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E L E+ G H Y+ AY + + +L + FN++SQ ++F A G Sbjct: 67 EAQLAFEEMGSPAHTYSPAYTEADFPLILRYSSHVTFNSLSQFHRFYPMVRADGNRVSCG 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRINP S + L +P P SR+G + + + GL FH CE+ S+ L Sbjct: 127 LRINPEYSDVETDLYNPCAPGSRMGVTGDLLGDKLPEGIEGLHFHTLCESTSYD-LERTL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 +E+ FG F+ ++W+++GGG T K Y V+ LK F E+Y ++ +EPG A Sbjct: 186 AEVERRFGRFLPHVKWLNMGGGHLMTRKGYDVEHLIALLKGFKERYPNLELIMEPGSAFA 245 Query: 239 TNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVC 293 T L TTV+DI EN I+D+S H+PD L I G T + Sbjct: 246 WQTGFLLTTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYKPAIRFATDAVEGKPTYRIG 305 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G SCL+GD G++ F+KP++IGD++ FED+ Y I + N FNGI P++A+ + D + Sbjct: 306 GNSCLSGDYMGDWSFDKPLEIGDKLIFEDMIHYTIVKTNMFNGIPHPSLALWSKDDQLVM 365 Query: 354 IREFSYNDYYNNL 366 R F Y DY N + Sbjct: 366 YRTFGYEDYKNRM 378 >gi|150006033|ref|YP_001300777.1| carboxynorspermidine decarboxylase [Bacteroides vulgatus ATCC 8482] gi|254881795|ref|ZP_05254505.1| carboxynorspermidine decarboxylase [Bacteroides sp. 4_3_47FAA] gi|319641187|ref|ZP_07995888.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_40A] gi|149934457|gb|ABR41155.1| carboxynorspermidine decarboxylase [Bacteroides vulgatus ATCC 8482] gi|254834588|gb|EET14897.1| carboxynorspermidine decarboxylase [Bacteroides sp. 4_3_47FAA] gi|317387161|gb|EFV68039.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_40A] Length = 387 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 124/382 (32%), Positives = 192/382 (50%), Gaps = 17/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++D+ L NL + AGV+++LA K FA W F +Y+ TT+SS+Y Sbjct: 7 VPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFPIFREYIRYTTASSVY 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E L +E+FG + H Y+ AY D + ++ I FN+ SQ +F A G Sbjct: 67 EARLAYEEFGSKAHTYSPAYTDTDFPVIMRCSSHITFNSFSQFRRFYPMVEAFGEKITCG 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RINP S + L +P P +R G E+ + + G H +CE+ S+ L Sbjct: 127 IRINPEYSEVEVELYNPCAPGTRFGVTADLLPETLPEGIEGFHCHCHCESSSYE-LEHTL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 ++IE++F + QI+W++LGGG T KDY + LK +Y +I LEPG A Sbjct: 186 QHIEEKFASWFPQIKWLNLGGGHLMTRKDYDTEHLISLLKNLKARYPHLEIILEPGSAFT 245 Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG----------- 286 T L +V+DI EN + D S H+PD L + Sbjct: 246 WQTGPLVASVVDIVENRGIKTAILDVSFTCHMPDCLEMPYQPAVRGAKTLPVDAIKTALT 305 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + G SCL+GD G + F+ P++IG+RI ED+ Y + + N FNGI+ P+IA+ Sbjct: 306 EENVYRLGGNSCLSGDYMGSWCFDHPLQIGERIVLEDMIHYTMVKTNMFNGIHHPSIAIW 365 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 + D T++ ++F Y DY + +S Sbjct: 366 HTDNTLEVYKDFRYEDYRDRMS 387 >gi|85708349|ref|ZP_01039415.1| carboxynorspermidine decarboxylase [Erythrobacter sp. NAP1] gi|85689883|gb|EAQ29886.1| carboxynorspermidine decarboxylase [Erythrobacter sp. NAP1] Length = 397 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 105/380 (27%), Positives = 182/380 (47%), Gaps = 15/380 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALY-----IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 + +P +++D K+ N A +K+ ALK F+ W + + +Y+DG + Sbjct: 19 VDSPSFVVDAAKIRENCQILADIRDAAASDGASIKVFAALKAFSMWSVAPIMGEYLDGVS 78 Query: 57 SSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 +S L+E L E + G+ Y+ A+K +++ + + +IFN+ +Q+ + + Sbjct: 79 TSGLWEARLASEFYDGDIATYSAAFKPEDLEEICRLSEHVIFNSPAQMQRAALILDQAQV 138 Query: 117 K-----IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171 +GLR+NP V+ + DP+ P SRLG E ++ V G+ FHN CE Sbjct: 139 TGGDVSVGLRLNPMVATGEVPKYDPSAPGSRLGFPIDQLTEEHMEGVEGIHFHNLCEQT- 197 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231 F + + Q++WI++GGG H T DY + L++ +E +I + Sbjct: 198 FEPLRQTWDRVFDVIEPWFGQLKWINMGGGHHITRADYERDKLVEFLRDAAEDTGAEIII 257 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY---PNTGPY 288 EPGEA+ + L T+LD N + I D S H+PD L + + Sbjct: 258 EPGEAVALDAGILVGTLLDTGFNDVPIGITDISATCHMPDVLEAPYRPAMLGELTDEDKI 317 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 + G SCLAGD+ G++ P G R +F D A Y++ + N FNG+ +P+I + + + Sbjct: 318 PIRLGGPSCLAGDVIGDYRLPVPADPGARFAFLDQAHYSMVKTNTFNGVPLPSIWLWDSE 377 Query: 349 -GTIKAIREFSYNDYYNNLS 367 + ++ F Y D+ + LS Sbjct: 378 TDALDCVKRFEYEDFRDRLS 397 >gi|255323023|ref|ZP_05364159.1| carboxynorspermidine decarboxylase [Campylobacter showae RM3277] gi|255299885|gb|EET79166.1| carboxynorspermidine decarboxylase [Campylobacter showae RM3277] Length = 379 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 131/372 (35%), Positives = 204/372 (54%), Gaps = 9/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IK P Y+ ++ K+ NL+ ++ +G K+L+ALK FA G+ + +Y+DG T S L+ Sbjct: 8 IKMPAYVCEEAKVRANLEILKRVKDESGAKVLVALKGFAFSGVMGLVGEYLDGATCSGLH 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + GE H Y+ A+KD +ID VL+ ++FN+ +Q KFK KA GLR Sbjct: 68 EAKFAQKHVRGEIHTYSPAFKDEDIDEVLALSKHVVFNSFAQWAKFKQKALAAGVTCGLR 127 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP +S + +P +SRLG + + + GL FH CE +S +L Sbjct: 128 VNPELSVAPTDAYNPCGRYSRLGITRANFDADALDGITGLHFHALCE-ESAQSLETVLMA 186 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG FI +++W++ GGG H T + Y V +K F EKY V++Y+EPGEA+ T Sbjct: 187 FEEKFGEFIPRMKWVNFGGGHHVTKEGYDVDLLINLIKNFREKYGVEVYIEPGEAVGWQT 246 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT--GPYTAMVCGRSCLA 299 L +VLD +N K + I+D S EAH+PD +L + + G ++ G +CLA Sbjct: 247 GFLAASVLDFVQNEKTIAILDVSAEAHMPDTVLMPYRPAVRGESKGGKFSYRFGGNTCLA 306 Query: 300 GDIFG------EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 GDI G E+ F+ P+ +GD++ FED Y I + FNGI +P + + +G + Sbjct: 307 GDIVGLDAGEPEYKFDAPLSVGDKVIFEDQIHYTIVKNTTFNGIKLPDLLLLKENGELVT 366 Query: 354 IREFSYNDYYNN 365 +REF + +Y Sbjct: 367 VREFGFEEYERR 378 >gi|114763331|ref|ZP_01442755.1| carboxynorspermidine decarboxylase [Pelagibaca bermudensis HTCC2601] gi|114544129|gb|EAU47139.1| carboxynorspermidine decarboxylase [Roseovarius sp. HTCC2601] Length = 376 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 203/366 (55%), Positives = 265/366 (72%), Gaps = 3/366 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPYYLIDK +LL N++ ++R+ +G K LLALKCFA W +FD +++YMDGTTSSSL+ Sbjct: 14 MQTPYYLIDKSRLLPNMEKIAHLREQSGAKALLALKCFATWSVFDMMSEYMDGTTSSSLF 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG EKF GETHAY+VA+ EID VL++ D +IFNT QL +F++K++ GLR Sbjct: 74 EVKLGREKFSGETHAYSVAWAPDEIDEVLASSDKVIFNTAQQLQRFEEKSRDHT--RGLR 131 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS S F LADP RPFSRLGE + IE + ++G MFHNNCEN SF F ML Sbjct: 132 VNPGVSTSGFDLADPARPFSRLGEHAPEDIEPVAELISGFMFHNNCENASFERFDEMLGQ 191 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE FG I +++WISLGGGIHFT +DYP+ +RLK F+ + VQ+YLEPGEA +T + Sbjct: 192 IEARFGPLIKRMKWISLGGGIHFTGEDYPLDKLAERLKRFAGENEVQVYLEPGEAAITKS 251 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 TTL TVLD N KNL IVDSS+EAH+ D L+Y+ESA + +G M+CG+SCLAGD Sbjct: 252 TTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYRESAKM-QESGDQEWMICGKSCLAGD 310 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 IFGEF F K ++ GDR+S +D AGY + +KNWFNG+ MP+IA++ +DGT + +R F Y D Sbjct: 311 IFGEFRFPKALQAGDRLSLQDAAGYTMVKKNWFNGVQMPSIAIRELDGTERLVRSFGYED 370 Query: 362 YYNNLS 367 + LS Sbjct: 371 FAAALS 376 >gi|265753475|ref|ZP_06088830.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_33FAA] gi|263235189|gb|EEZ20713.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_33FAA] Length = 387 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 124/382 (32%), Positives = 193/382 (50%), Gaps = 17/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++D+ L NL + AGV+++LA K FA W F +Y+ TT+SS+Y Sbjct: 7 VPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFSVFREYIRYTTASSVY 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119 E L +E+FG + H Y+ AY D + ++ I FN+ SQ +F KA G Sbjct: 67 EARLAYEEFGSKAHTYSPAYTDTDFPVIMQCSSHITFNSFSQFRRFYPMVKASGEKISCG 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RINP S + L +P P +R G E+ + + G H +CE+ S+ L Sbjct: 127 IRINPEYSEVEVELYNPCAPGTRFGVTADLLPETLPEGIEGFHCHCHCESSSYE-LEHTL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 ++IE+ F + QI+W++LGGG T KDY + LK +Y +I LEPG A Sbjct: 186 QHIEETFARWFPQIKWLNLGGGHLMTRKDYDTEHLISLLKGLKARYPHLEIILEPGSAFT 245 Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG----------- 286 T L +V+DI EN + D S H+PD L + Sbjct: 246 WQTGPLVASVVDIVENRGIKTAILDVSFTCHMPDCLEMPYQPAVRGAEALPVDAIKTALT 305 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + G SCL+GD G + F+ P+++G+RI ED+ Y + + N FNGI+ P+IA+ Sbjct: 306 EENIYRLGGNSCLSGDYMGSWRFDHPLQVGERIVLEDMIHYTMVKTNMFNGIHHPSIAIW 365 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 ++D T++ ++F Y DY + +S Sbjct: 366 HIDNTLEVYKDFRYEDYRDRMS 387 >gi|294778329|ref|ZP_06743754.1| carboxynorspermidine decarboxylase [Bacteroides vulgatus PC510] gi|294447836|gb|EFG16411.1| carboxynorspermidine decarboxylase [Bacteroides vulgatus PC510] Length = 387 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 124/382 (32%), Positives = 192/382 (50%), Gaps = 17/382 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++D+ L NL + AGV+++LA K FA W F +Y+ TT+SS+Y Sbjct: 7 VPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFPIFREYIRYTTASSVY 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E L +E+FG + H Y+ AY D + ++ I FN+ SQ +F A G Sbjct: 67 EARLAYEEFGSKAHTYSPAYTDTDFPVIMRCSSHITFNSFSQFRRFYPMVEAFGEKITCG 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RINP S + L +P P +R G E+ + + G H +CE+ S+ L Sbjct: 127 IRINPEYSEVEVELYNPCAPGTRFGVTADLLPETLPEGIEGFHCHCHCESSSYE-LEHTL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 ++IE++F + QI+W++LGGG T KDY + LK +Y +I LEPG A Sbjct: 186 QHIEEKFASWFPQIKWLNLGGGHLITRKDYDTEHLISLLKNLKARYPHLEIILEPGSAFT 245 Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG----------- 286 T L +V+DI EN + D S H+PD L + Sbjct: 246 WQTGPLVASVVDIVENRGIKTAILDVSFTCHMPDCLEMPYQPAVRGAKTLPVDAIKTALT 305 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + G SCL+GD G + F+ P++IG+RI ED+ Y + + N FNGI+ P+IA+ Sbjct: 306 EENVYRLGGNSCLSGDYMGSWCFDHPLQIGERIVLEDMIHYTMVKTNMFNGIHHPSIAIW 365 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 + D T++ ++F Y DY + +S Sbjct: 366 HTDNTLEVYKDFRYEDYRDRMS 387 >gi|269925950|ref|YP_003322573.1| diaminopimelate decarboxylase [Thermobaculum terrenum ATCC BAA-798] gi|269789610|gb|ACZ41751.1| diaminopimelate decarboxylase [Thermobaculum terrenum ATCC BAA-798] Length = 418 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 62/383 (16%), Positives = 120/383 (31%), Gaps = 21/383 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ + N K+ +LK + L G +S E Sbjct: 28 QTPLYVYSANYIRNAYQKLKESFGGFPTKICYSLKSNPNIWIGKLLADLGAGADVTSGGE 87 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + F E + K +A+ S + +L K + AQ L++ Sbjct: 88 LFRALKAGFNPEDIVFAGVGKSSREIVEALRSGVGLFSIESEQELRKISELAQSLNRVAN 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENK 170 I +R+NP++ ++ G ++ + + G+ H + Sbjct: 148 ISIRVNPNIDPHTHEKITTGLRSNKFGVPIEEALRVYQLACTLPAIRIVGIGMHIGSQLV 207 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEK 224 + I ++E+I +GGG K + + L+ Sbjct: 208 NLDPVIQAANTILDMAEELINTGIRLEYIDIGGGFGIKYKDESPEDPEIVAKALERRLRD 267 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESA--TI 281 +++ +EPG I + L T+VL + K VIVD+ + A + L + Sbjct: 268 LKLKLIIEPGRFISGPSGALLTSVLYTKTSGGKKFVIVDAGMNALIRPALYDAYHHIQPL 327 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C + D + V + I+ Y + +N P Sbjct: 328 VRRDKTEIVDVVGPICESSDYLAKDRLLPQVFPTETIAILQAGAYGFAMASEYNSHPRPA 387 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y D Sbjct: 388 EILVDGNKVRLIRKRQTYEDLIR 410 >gi|268323184|emb|CBH36772.1| diaminopimelate decarboxylase [uncultured archaeon] Length = 419 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 71/391 (18%), Positives = 128/391 (32%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D+ L NN + K+A A+K + L G S E Sbjct: 23 GTPLYVTDEDMLRNNFRSYNSAFKSADK--YYAVKANGNLAILKILASEGAGADVFSGGE 80 Query: 63 VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118 + L + +N + E+ AV+ + ++ ++ A +I Sbjct: 81 LQLVKSAGIPRDKILFNGNSKSEEELRAVVEAGVKVSVDSHDEMRTLSAIAVAMDKEVEI 140 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCENKS 171 +R+NP VS S+ G C+D + GL H + Sbjct: 141 AIRVNPDVSPKVNPKIATGLRESKFGIPFYEVIATCEDAKMLPNITLTGLHCHIGSQILD 200 Query: 172 FLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 FS + + ++E++ LGGG+ + + D + + Sbjct: 201 VSVFSEATEKMMNLVEELYARGMELEFVDLGGGLGISHRKEEKAPTPNDLADAILPTFDA 260 Query: 225 YSV------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 ++ LEPG +IV T L V + + KN V +D+ + + Sbjct: 261 RLDSLGIKLKLVLEPGRSIVGPATILLCRVNTVKQAYKNFVAIDAGFNLFMRPVMYGAYH 320 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + N V G C +GDI + V+ GD ++ + Y + + + Sbjct: 321 EVVVANKLNEQASVLCTVVGPVCESGDILAKDRMLPEVERGDLVAILNAGAYGFSMSSQY 380 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 NG + + S +D N Sbjct: 381 NGRPRCAEVLICDGKVDVIRTKESVDDLIRN 411 >gi|85373773|ref|YP_457835.1| carboxynorspermidine decarboxylase [Erythrobacter litoralis HTCC2594] gi|84786856|gb|ABC63038.1| carboxynorspermidine decarboxylase [Erythrobacter litoralis HTCC2594] Length = 415 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 116/398 (29%), Positives = 189/398 (47%), Gaps = 33/398 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D KL NL IR + K+L ALK F+ + + + +Y+DG +S L+ Sbjct: 19 VDSPAFVVDAAKLRANLQILAEIRDVSETKMLSALKAFSMFSVAPIIGEYLDGVCTSGLF 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-----K 116 E L E + GE Y AYK +++ V D +IFN+ Q+ + + ++ Sbjct: 79 EARLASEFYDGEISTYCAAYKPEDLEEVCRLSDHVIFNSPQQIERARLILEQAQVTGGDF 138 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 +GLRINP V + DP+ P SRLG ++ + G+ FHN CE F Sbjct: 139 SVGLRINPQVPTGEVPRYDPSSPGSRLGFPIDQLTPEIMEGIEGIHFHNLCEQD-FEPLH 197 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + + Q++WI++GGG H T DY ++ + LK+ E +IYLEPGEA Sbjct: 198 RTWDKVFDAIEPWFGQLKWINMGGGHHITRADYQREELVELLKDAKEDTGAEIYLEPGEA 257 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------- 289 + + L T+LD N I D S H+PD + + + Sbjct: 258 VALDAGILVGTILDNGVNEVPFAITDVSATCHMPDVIEAPYRPAMLHENIEASPSESWDL 317 Query: 290 -------------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + G SCLAGD+ G++H +P + G RI+F D A Y++ + Sbjct: 318 SQTGSEPREAPAFAGAQGAVRLGGPSCLAGDVIGDYHLPEPNEPGQRIAFLDQAHYSMVK 377 Query: 331 KNWFNGINMPTIAVKNVD-GTIKAIREFSYNDYYNNLS 367 N FNG+ +P+I + + + ++ ++EF Y D+ + LS Sbjct: 378 TNTFNGVPLPSIWLWDSETDQLELVKEFGYEDFRDRLS 415 >gi|302035867|ref|YP_003796189.1| diaminopimelate decarboxylase [Candidatus Nitrospira defluvii] gi|300603931|emb|CBK40263.1| Diaminopimelate decarboxylase [Candidatus Nitrospira defluvii] Length = 420 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 65/386 (16%), Positives = 118/386 (30%), Gaps = 24/386 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ L+ + +N + A+K + + + + G S Sbjct: 25 VGTPCYVYSHHTLVRHFRVYDSAFQNIPHIVAFAMKANSNLAVLRMMAKEGSGVDIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ + + DA+ ++ + ++L D A + Sbjct: 85 ELFRALKAGVPPGKIVFAGVGKKPEEIRDALKADILMFNVESSAELQAINDVAASMGVKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCEN 169 ++ LRINP + S+ G IE V GL H + Sbjct: 145 RVALRINPDIDPKTHPYISTGLKKSKFGIAADRAIEEFKAAAAFSHIEVVGLHAHIGSQL 204 Query: 170 KSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF---CQRLKEFSE 223 F LK + + I ++++GGG+ T D + + Sbjct: 205 TQVAPFVESLKKVLTMVQTLAEQGIPIRYLNIGGGLGITYSDETPPEPKDLAAAIFPLVR 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + +EPG IV N L T VL + K +IVD+++ + L Sbjct: 265 DLKCVLIMEPGRVIVGNAGVLLTKVLYTKDGETKRFLIVDAAMNDLIRPSLYDAHHDIKP 324 Query: 283 PNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T V G C +GD + + GD ++ Y + +N Sbjct: 325 VYENVARGAKETVDVVGPVCESGDFLAKDRAMPEMNAGDLMAVMSAGAYGFVMSSNYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYY 363 + + SY+D Sbjct: 385 PRVPEVLVHEGQIHVIRARESYDDLV 410 >gi|330812549|ref|YP_004357011.1| diaminopimelate decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380657|gb|AEA72007.1| diaminopimelate decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 415 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 120/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + T + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRTFADALEGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ ++ A+ + +L + + A +L Sbjct: 86 LERVLAAGGSADKIVFSGVGKTREDMRRALEVGVHCFNIESTDELERLQIVAAELGVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 I LR+NP V ++ G D + V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYVRAAQLPNLEVLGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L + G + I LGGG+ +D +K E+ Sbjct: 206 TLEPFIDALDRLLALVDRLGDCGIYLRHIDLGGGVGVRYRDEEPPLVADYIKAVRERLDG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLALMFEPGRYIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 +T + + G C GD + ++ GD ++ Y + +N Sbjct: 326 RPRDTAARSYDIVGPICETGDFLAKGRELA-LEEGDLLAVHSAGAYGFVMSSNYNTRGRC 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + R + + + Sbjct: 385 AEVLVDGDQAFEVRRRETVVELFA 408 >gi|83944426|ref|ZP_00956880.1| diaminopimelate decarboxylase [Sulfitobacter sp. EE-36] gi|83844749|gb|EAP82632.1| diaminopimelate decarboxylase [Sulfitobacter sp. EE-36] Length = 421 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 120/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ LL + + A+K + + TL Q G S Sbjct: 25 VGTPFYVYSTATLLRHFKAFDDALDGMDHLVCYAMKANSNQAVLKTLAQAGAGMDVVSAG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E + G+ ++ K A+ + ++ A+ + K Sbjct: 85 EYLRAKAAGVPGDKIVFSGVGKTVSEIRLALEGGIRQFNVESEPEMEVLDAVARSMDKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 I +R+NP V + ++ G E V G+ H + Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYRMAAAMPGLEVVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + + I + LGGG+ + D+ +++ Sbjct: 205 TDLTPFELAYQKVAELTEQLRADGHTIRRLDLGGGLGIPYERSNAAPPLPTDYGAMVQKT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N + + V+ + I+D ++ + + Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSEVIYVKSGEGRDFLIIDGAMNDLIRPAMYEAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + G C +GD F + + GD ++F Y + +N Sbjct: 325 IPVVEAEAGAEQQPYDIVGPVCESGDTFAKQRMMPKLAAGDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D R ++++ N Sbjct: 385 SRALIPEVLVHGDQFAVIRRRPTFDEMINR 414 >gi|149194454|ref|ZP_01871551.1| Diaminopimelate decarboxylase [Caminibacter mediatlanticus TB-2] gi|149135629|gb|EDM24108.1| Diaminopimelate decarboxylase [Caminibacter mediatlanticus TB-2] Length = 402 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 116/385 (30%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + K + A+K + + G S+ E Sbjct: 11 DTPLYVYDFNHFEKQYNELKQAFKARKSIIAYAIKANSNLSVIKKFASLGSGADCVSIGE 70 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119 V ++ K + + D + + ++L + + A+ ++K+ Sbjct: 71 VKRALLAGVDKYKIIFSGVGKRDDEIKEALDKDILMLNVESEAELKRIDEIAKSMNKEAR 130 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 + R+NP + ++ G + + +S+ N G+ FH + Sbjct: 131 ISIRVNPDIDPKTHPYISTGLSENKFGVDIESAKKMYINAKKSKNLNPIGIHFHIGSQLT 190 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 + + I++ +GGG+ KD D+ Q + Sbjct: 191 ELNPIKEASEIVANLVRSLKAINVDIKFFDIGGGLGIKYKDEETIKPYDYAQAILSTLSG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES--ATI 281 V I EPG +V N T VL K VIVD ++ + L I Sbjct: 251 LDVTIICEPGRFLVGNGGWFLTKVLYEKVNGDKRFVIVDGAMNDLIRPSLYNAYHKVEVI 310 Query: 282 YPNTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P A + G C +GD F + GD I Y + +N Sbjct: 311 SSVKNPQISKANIVGPVCESGDFFAKDIEVPQTNPGDLIVIHSAGAYGFTMSSNYNTRPR 370 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P R ++ D Sbjct: 371 PCEIAIEDGKDRVIRRRETFEDLIA 395 >gi|221133748|ref|ZP_03560053.1| Carboxynorspermidine decarboxylase [Glaciecola sp. HTCC2999] Length = 378 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 127/371 (34%), Positives = 202/371 (54%), Gaps = 7/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y++++ KL++NL +++ GV ++LALK F+ W FD +++Y+ G T+S+L+ Sbjct: 10 IPSPCYVLEEAKLIDNLKLMAHVQAATGVDIILALKGFSMWSCFDLVSKYLQGGTASALW 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L G + HA++ A+K E+DA+++ D I FN+++Q KD ++ + +GLR Sbjct: 70 EAKLAKR-LGKQVHAFSPAFKTAEMDAIVNEVDHISFNSLAQYLMHKDTCERGNVSMGLR 128 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP ++ L DP P SRLG ++ + G H CE S+ L Sbjct: 129 VNPEHQEAETPLYDPCAPGSRLGITAVQLQHQDLSGIEGFHIHGLCECDSYATERM-LNA 187 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 IE++F + +++W++LGGG T DY + L F KY + LEPG A+ Sbjct: 188 IEQQFSAYFPKLKWLNLGGGHLMTQADYDIDHLINVLNRFKAKYPHLHVILEPGSAVAWQ 247 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGRS 296 T L V+DI EN + I+D SV AH+PD L I YT + G S Sbjct: 248 TGPLIAEVVDIVENNGPIAILDISVTAHMPDVLEMPYRPMIKDAQEANVLAYTYRLGGNS 307 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGD+ E+ F +P+ +G RI FED+ Y + + +FNG+ P I + +G + +RE Sbjct: 308 CLAGDMLPEYSFAEPLAVGQRIVFEDMMHYTMVKTTFFNGVQHPGIGILRQNGEFELVRE 367 Query: 357 FSYNDYYNNLS 367 F+Y+D+ LS Sbjct: 368 FTYDDFLARLS 378 >gi|117927014|ref|YP_867631.1| diaminopimelate decarboxylase [Magnetococcus sp. MC-1] gi|117610770|gb|ABK46225.1| diaminopimelate decarboxylase [Magnetococcus sp. MC-1] Length = 419 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 70/390 (17%), Positives = 124/390 (31%), Gaps = 24/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y ++ LL++L + + ++K + + D L + G S Sbjct: 25 VGTPFYCYSERTLLHHLQVFQQAFASQDSLICYSVKANSNLAVLDALAKQGAGFDIVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKD--KAQKLHK 116 E+ GE ++ K A+ ++ +L + ++ A + Sbjct: 85 ELERVRRVGCPGERVVFSGVGKSRAEIQAALAYGVRMFNVESIPELQRIQEVALAMDVAA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 + LRINP V ++ G + + V GL H + Sbjct: 145 PVTLRINPDVDPKTHPYISTGLKRNKFGIPFGEAVAVYQQAAQMSHVQVVGLDCHIGSQL 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFS 222 F LK + +I+ + LGGG+ +D L E Sbjct: 205 TQLSPFVDALKRVMVLIQALKGHGIEIKNLDLGGGLGIPYEDGDTPPSPAELAAALLEQL 264 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V + LEPG AIV N L T V + + ++ VI D+ + + + I Sbjct: 265 DGMPVTVILEPGRAIVGNAGVLVTRVEYVKKGEQRHFVITDAGMNDLLRPAIYNAYHGVI 324 Query: 282 YPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 V G C GD F + V G+ ++ Y + +N Sbjct: 325 PLQRKFDREEQVVDVVGPICETGDFFARDRYLSEVYQGELLAVRSAGAYGFVMSSNYNTR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + D + S N S Sbjct: 385 PRVAEVLVRGDRYAVVRKRESVAQLLENES 414 >gi|294673620|ref|YP_003574236.1| carboxynorspermidine decarboxylase [Prevotella ruminicola 23] gi|294474225|gb|ADE83614.1| carboxynorspermidine decarboxylase [Prevotella ruminicola 23] Length = 373 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 120/373 (32%), Positives = 188/373 (50%), Gaps = 13/373 (3%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+I++ KL NL + A ++++LA K FA W F +Y++ TT+SSL E Sbjct: 3 TPIYIIEETKLRRNLSLIAEVAAKADIEVILAFKAFALWKTFPIFREYINSTTASSLSEA 62 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L E+F H Y+ AY + E ++ I FN++SQ +F ++A+ +GLR+N Sbjct: 63 RLAFEEFKAPAHTYSPAYTEEEFPEIVKCSSHITFNSLSQYERFHEQAKSAS--LGLRVN 120 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 P S +L +P P +R G E ++ G H CE+ F L +IE Sbjct: 121 PEYSEVSTLLYNPCAPGTRFGITADKLPEQLPADIEGFHCHTLCESG-PDVFQRTLVHIE 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTT 242 ++F + Q++WI+ GGG T KDY V+ + + +F ++Y +I LEPG A T Sbjct: 180 EKFAKWFPQLKWINFGGGHLMTRKDYDVELLIKIIHDFKKRYPWLKIILEPGSAFAWQTG 239 Query: 243 TLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT--------GPYTAMVC 293 L + V+DI E+ + D S H+PD L + P T + Sbjct: 240 PLVSHVVDIVEDKGIKTAILDVSFTCHMPDCLEMPYMPEVRGAEIVEMEKATEPMTYRLG 299 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G SCL+GD G + F+ +K+G+ I FED+ Y + FNGI+ P I + + +G ++ Sbjct: 300 GNSCLSGDFMGSWLFDHELKVGEEIIFEDMIHYTTVKTCTFNGISHPAIGMLHANGKLEI 359 Query: 354 IREFSYNDYYNNL 366 +R F Y DY N + Sbjct: 360 LRSFGYEDYRNRM 372 >gi|146280906|ref|YP_001171059.1| diaminopimelate decarboxylase [Pseudomonas stutzeri A1501] gi|145569111|gb|ABP78217.1| diaminopimelate decarboxylase [Pseudomonas stutzeri A1501] gi|327479175|gb|AEA82485.1| diaminopimelate decarboxylase [Pseudomonas stutzeri DSM 4166] Length = 415 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 64/384 (16%), Positives = 119/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALEGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + ++ +D A+ + +L + + A + + Sbjct: 86 LERVLAAGGEPGRIVFSGVGKTRDDMRRALEVGVHCFNVESTDELERLQQVAAELGMKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G E V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIDIDNAEAVYARAAELPNLEVVGVDCHIGSQLT 205 Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 FL L + QI + LGGG+ +D D+ Q +++ E Sbjct: 206 SLPPFLDALDRLLALIDRLATRGIQIRHLDLGGGLGVRYRDEQPPLAGDYIQAVRQRIEG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + EPG +IV N L T V + K+ IVD+++ + L I Sbjct: 266 RGLALVFEPGRSIVANAGLLLTRVEYLKHTAHKDFAIVDAAMNDLIRPALYQAWMNVIAV 325 Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD + + GD ++ Y + +N Sbjct: 326 QPHEGDTRRYDIVGPICETGDFLAKDRELA-LAEGDLLAVCSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + R S + Y Sbjct: 385 AEVLVDGDQAFEVRRRESVQELYA 408 >gi|291545481|emb|CBL18589.1| carboxynorspermidine decarboxylase [Ruminococcus sp. SR1/5] Length = 405 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 128/378 (33%), Positives = 200/378 (52%), Gaps = 14/378 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IKTP Y++D+ L+ N + I K G K+LLA K F+ + + L Y+ GT +S LY Sbjct: 24 IKTPCYVLDEAALIKNAELMGNIAKRTGCKMLLAQKAFSNYDCYHLLEPYLTGTEASGLY 83 Query: 62 EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E LG ++ G E H + Y++ E + +LS D I+FN+ SQL +F + ++ K GL Sbjct: 84 EARLGAQEMPGKEVHVFCAGYREDEFEELLSFADHIVFNSPSQLLRFGKRVKEAGKNAGL 143 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173 RINP S + DP P SR+G + K+ ++G+ FH CE S Sbjct: 144 RINPECSTQEGHAIYDPCAPGSRMGTTRAQWETAVRKHPELIGLLDGIHFHTLCEQDSSD 203 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 L ++ +FG I+Q++W++LGGG H T Y + + ++ E++ V +YLEP Sbjct: 204 -LETTLTAVKTKFGDLISQMKWLNLGGGHHITRPGYDIARLEKCIRAAKEEWKVDVYLEP 262 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY----PNTGPY 288 GEA N TTVLD+ +N + + D S H+PD L + P Sbjct: 263 GEAWALNAGFFLTTVLDVLQNGDIRLAILDGSAACHMPDVLEMPYRPPLLGADEPGENAV 322 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 T + G +CL+GDI G++ F +P+K GD + F D+A Y + N FNG+ +P I +++ D Sbjct: 323 TIRLGGPTCLSGDIIGDYSFSEPLKYGDILMFGDMAIYTTCKNNTFNGMPLPDIWLRHGD 382 Query: 349 GTIKAIREFSYNDYYNNL 366 T++ + +F Y D+ L Sbjct: 383 KTMERLTDFGYEDFKGRL 400 >gi|148653513|ref|YP_001280606.1| carboxynorspermidine decarboxylase [Psychrobacter sp. PRwf-1] gi|148572597|gb|ABQ94656.1| carboxynorspermidine decarboxylase [Psychrobacter sp. PRwf-1] Length = 379 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 196/379 (51%), Positives = 249/379 (65%), Gaps = 12/379 (3%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M+KTPYY ID L NL + +G K LLALKCFA WG+FD + Y+ GTTSSSL Sbjct: 1 MLKTPYYQIDIAALKQNLQIVQRLCDLSGAKALLALKCFATWGVFDEMTPYLHGTTSSSL 60 Query: 61 YEVMLGHEKFG--GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 EV LG E+FG ETHAY+VAY EID VL+ D IIFN+ +QL+ FKDKA+ + Sbjct: 61 NEVRLGKEEFGEDKETHAYSVAYSADEIDEVLTYADKIIFNSFNQLHAFKDKAKAQGIPV 120 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 GLRINP S S FI+ADP RPFSRLGE KI+ I ++ G+M HNNCEN SF FS Sbjct: 121 GLRINPKTSNSSFIIADPARPFSRLGEHDIQKIKPVIDDITGVMIHNNCENNSFEAFSDS 180 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 L +IE +FG Q+EW+SLGGGIHF DYP++ QRLK FSEKY VQ+YLEPGEA + Sbjct: 181 LADIEAKFGELFYQLEWVSLGGGIHFIAPDYPLEKLAQRLKSFSEKYGVQVYLEPGEACI 240 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA----------TIYPNTGPY 288 N L TTVLD N K L +VD+S+EAH+ D L+Y+E+A I Sbjct: 241 HNAAKLVTTVLDTLHNGKPLAVVDASIEAHMLDLLIYRETAPLVQINDEACQITSQQSDD 300 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 + ++ G+SCLAGDIFGE+ +KP+ IGD++SF + AGY + +KNWFNG+ MP I + + Sbjct: 301 STIIYGKSCLAGDIFGEYALDKPLTIGDKVSFGNAAGYTMVKKNWFNGVAMPAIVICDEQ 360 Query: 349 GTIKAIREFSYNDYYNNLS 367 G + + F Y D+ +LS Sbjct: 361 GELTIQKTFGYEDFKASLS 379 >gi|332829256|gb|EGK01910.1| carboxynorspermidine decarboxylase [Dysgonomonas gadei ATCC BAA-286] Length = 380 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 126/375 (33%), Positives = 192/375 (51%), Gaps = 10/375 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P ++++++ L NL +++ AGV ++LA K FA W F + +Y+ +T+SS++ Sbjct: 7 VPSPCFVMEEELLRKNLSLIKSVKERAGVNIILAFKAFAMWKSFPIIREYIPYSTASSVF 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119 E L +E+ G H ++ AY + I FN++SQ +F + G Sbjct: 67 EAQLAYEEMGSLAHTFSPAYTPDNFPVFMRYSSHITFNSLSQYERFYPETLKHRKKVSCG 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RINP S + L +P P SRLG + + V GL FH CE+ S+ L Sbjct: 127 IRINPEYSVVETDLYNPATPDSRLGVPVSHFGDELPEGVEGLHFHTLCESSSYD-LEKTL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY-LEPGEAIV 238 + +EK+FGHF+ +I+W+++GGG T +DY V+ L F KY +EPG A Sbjct: 186 EQVEKKFGHFLPKIKWLNMGGGHLMTREDYDVEHLINLLLSFKAKYPNLEITMEPGSAFA 245 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIY-----PNTGPYTAMV 292 T L +TV+DI +N + H+PD L I P G T + Sbjct: 246 WQTGVLVSTVVDIVDNGGIKTAILDVSFACHMPDCLEMPYKPYIRGAYHEPVKGLPTYRM 305 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G SCL+GD GE+ F++P+ IGDRI FED+ Y + FNGI+ P IA+ N ++ Sbjct: 306 GGSSCLSGDFIGEWSFDEPLLIGDRIIFEDMIHYTTVKTTMFNGISHPAIALWNKYNQLE 365 Query: 353 AIREFSYNDYYNNLS 367 REF Y DY N +S Sbjct: 366 IYREFDYEDYKNRMS 380 >gi|149376983|ref|ZP_01894737.1| diaminopimelate decarboxylase [Marinobacter algicola DG893] gi|149358760|gb|EDM47230.1| diaminopimelate decarboxylase [Marinobacter algicola DG893] Length = 416 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 57/382 (14%), Positives = 119/382 (31%), Gaps = 24/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + L + G S E Sbjct: 26 GTPAYVYSRATLERHYRAYDDALAGRPHLVCYAVKANSNIAVLNVLARLGAGFDIVSAGE 85 Query: 63 V-MLGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ + + ++L++ + A +L Sbjct: 86 LERVIRAGGDPAKTVFSGVGKQRWEMRRALEAGVRCFNVESDTELDRLNEVAGELGVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + ++ G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIDIAEAPAVYERAAAMANLDIQGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---KEFSEK 224 S F L + I + +GGG+ T + E Sbjct: 206 SVSPFLDALDRVLELIDTLAKKNINIRHLDMGGGLGVTYDQEQPPQPSDYVTALAERLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281 S+++ +EPG +I N L T V + I D+++ + L + I Sbjct: 266 RSLELIMEPGRSIAANAGILLTRVEFLKCTEHRNFAITDAAMNDLIRPALYSAWQSIIPV 325 Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C GD G+ + ++ GD ++ Y + +N N Sbjct: 326 TPRNDGDEKHWDLVGPVCETGDFLGKDRKLR-LQAGDLLAVRSAGAYGFVMSSNYNTRNR 384 Query: 340 PTIAVKNVDGTIKAIREFSYND 361 P + + + R + + Sbjct: 385 PPELMVDGEQVHVVRRRETLEE 406 >gi|258648530|ref|ZP_05735999.1| carboxynorspermidine decarboxylase [Prevotella tannerae ATCC 51259] gi|260851301|gb|EEX71170.1| carboxynorspermidine decarboxylase [Prevotella tannerae ATCC 51259] Length = 382 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 128/382 (33%), Positives = 184/382 (48%), Gaps = 17/382 (4%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M +TPYY I+++ L NNL AGV+ +LA K FA W F Y+ TT+SS Sbjct: 1 MRETPYYRIEERLLRNNLALIRRTANEAGVEFILAFKAFALWKTFFIFRDYIAHTTASSP 60 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118 E L E+FG + H Y+ AY+D + D ++ I FN++ Q F + Sbjct: 61 NEARLAFEEFGSKAHTYSPAYEDKDFDTIMRCSSHITFNSLQQFEHFYPRIVENGKLISC 120 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 GLRINP S + L +P P SR G + + + V G HN+CE+ S Sbjct: 121 GLRINPQYSEIETTLYNPCAPGSRFGILAEQLPDQLPEGVEGFHCHNHCES-SAAALVHT 179 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAI 237 L++IE FG ++ I+W++LGGG T KDY V+ LK F +Y + LEPG A Sbjct: 180 LEHIEARFGKWLPAIKWLNLGGGHLLTRKDYDVRLLIDTLKSFKARYPQLHLILEPGSAF 239 Query: 238 VTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPYT------- 289 T L +V+DI EN + + S H+PD L I Sbjct: 240 AWQTGDLFASVVDIVENDGIKTAILNVSFTCHMPDCLEMPYWPAIRGAETLEPPQAAGRE 299 Query: 290 -----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + G SCL+GD G + FE+P++IGD I F D+ Y + N FNGI P++ + Sbjct: 300 REPLVYRLGGNSCLSGDFMGYWRFEQPLQIGDTIRFSDMIHYTTVKTNMFNGIPHPSLVL 359 Query: 345 KNVDGTIKAIREFSYNDYYNNL 366 +G + +R F Y DY + + Sbjct: 360 LRENGEEELLRRFGYEDYRDRM 381 >gi|149186769|ref|ZP_01865080.1| carboxynorspermidine decarboxylase [Erythrobacter sp. SD-21] gi|148829677|gb|EDL48117.1| carboxynorspermidine decarboxylase [Erythrobacter sp. SD-21] Length = 392 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 115/375 (30%), Positives = 185/375 (49%), Gaps = 10/375 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P +++D KL N IR A +K+L ALK F+ W + +Y+DG +S L+ Sbjct: 19 VDSPAFVVDAAKLRANCQILADIRDEAEIKVLSALKAFSMWSAAPIIGEYLDGVCTSGLW 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-----AQKLHK 116 E L E + GE Y AYK E+D V D +IFN+ Q+++ A Sbjct: 79 EARLASEFYDGEISTYCAAYKPEELDEVCRLSDHVIFNSPGQMSRAALILDNARASGQDF 138 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 ++GLRINP V + DP+ P SRLG ++ V G+ FHN CE Sbjct: 139 EVGLRINPQVPTGEVPRYDPSSPGSRLGFPLDQLTPEIMEGVEGIHFHNLCEQD-LEPLI 197 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + + Q++WI++GGG H T DY ++ + LK+ + +IYLEPGEA Sbjct: 198 QTWDRVFDAIEPWFGQLKWINMGGGHHITRADYQREELIEFLKDAKDDTGAEIYLEPGEA 257 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY---TAMVC 293 + + L T+LD N + I D S H+PD + + + + Sbjct: 258 VALDAGILVGTILDTGYNGLPVAIADVSATCHMPDVIEAPYRPAMLGEASDHETPEVRIG 317 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIK 352 G SCLAGD+ G++ ++G R +F D A Y++ + N FNG+ +P+I + + + ++ Sbjct: 318 GPSCLAGDVIGDYRIPGGAEVGKRFAFLDQAHYSMVKTNTFNGVQLPSIYMWDSETDQLE 377 Query: 353 AIREFSYNDYYNNLS 367 ++EF Y+ + + LS Sbjct: 378 LVKEFGYDTFRDRLS 392 >gi|15679335|ref|NP_276452.1| diaminopimelate decarboxylase [Methanothermobacter thermautotrophicus str. Delta H] gi|8134391|sp|O27390|DCDA_METTH RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|2622442|gb|AAB85813.1| diaminopimelate decarboxylase [Methanothermobacter thermautotrophicus str. Delta H] Length = 428 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 65/391 (16%), Positives = 129/391 (32%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID+ ++ N + + ++ A K + L + G + S Sbjct: 28 GTPLYVIDEMRIRENYRRLYRAFSGEYSRFQVFYACKANTNLAVMRILEEEGSGIDAVSP 87 Query: 61 YEVMLGH-EKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ F + Y +D E+ L + I ++ SQL + + A + +I Sbjct: 88 GEIYTALMAGFDPDRILYTGNNVRDDELQFALDSGVRINVDSRSQLLRLSEIAPE-GLRI 146 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172 R+NP V S+ G ++ E ++ G+ H Sbjct: 147 SFRVNPLVGAGHHEHCITGGEMSKFGVMEREAPEVYRMAMDLGFEPVGIHAHIGSGILDP 206 Query: 173 LCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 F ++ + G + E+I GGG+ + +F ++ + Sbjct: 207 EPFMLAVETLMDIAGRVHEATGVEFEFIDFGGGLGIPYTPEEEPLDIDEFASKITGLFKD 266 Query: 225 Y-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 + LEPG IV + + L T V I E+ + VD+ + + Sbjct: 267 KLSEYGLGRPMMCLEPGRYIVGDASYLLTRVNTIKESYRKFAGVDAGFNTLLRPAMYGSY 326 Query: 278 SATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + + V G C +GD+F + GD ++ + Y+ + + Sbjct: 327 HHILVAERPLDEPSEKMDVAGNVCESGDLFARDRQLPEINEGDVLAIMNAGAYSFSMSSQ 386 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 +N P + +++D Sbjct: 387 YNSRPRPAEVLVREGKVDVVRERETFSDLLR 417 >gi|330962353|gb|EGH62613.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 415 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALDGMAHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + E ++ ++ A+ + +L + ++ A +L+ Sbjct: 86 LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L ++ G + I LGGG+ +D +K E+ + Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLGLLFEPGRFIVANAGVLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDSEARAYDIVGPICETGDFLAKDRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + + Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408 >gi|254492286|ref|ZP_05105460.1| diaminopimelate decarboxylase [Methylophaga thiooxidans DMS010] gi|224462611|gb|EEF78886.1| diaminopimelate decarboxylase [Methylophaga thiooxydans DMS010] Length = 416 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + N + A+K + + + L + G S E Sbjct: 26 GTPTYVYSRATLARHWKAFDDAFSNHAHLVCYAVKANSNLAVLNVLARLGSGFDIVSAGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K+ E N ++ +L + D A L+K Sbjct: 86 LARVIAAGGEAAKTVFSGVGKNREEIEYALNQNIRCFNVESIPELARINDVAAMLNKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 + +R+NP V ++ G +D + NV G+ H + Sbjct: 146 VSIRVNPDVDAQTHPYISTGLKENKFGIAIEDARTVYQSAKQMSNLNVVGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224 + F LK + E I+ + +GGG+ +D + L+ Sbjct: 206 TVSPFVDALKRVLTLIDELAEDGITIKHLDIGGGLGIHYRDETPPTPAEYAEALQPLLTD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESA---- 279 ++I LEPG AI N L T V I K IVD+++ + L Sbjct: 266 RDLEILLEPGRAIAGNAGILLTQVEFIKPTEAKQFAIVDAAMNDLLRPALYQSWQEIQPV 325 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + T + G C GD G+ +K GD ++ Y + +N Sbjct: 326 MLNSDAEEATYDIVGPICETGDFLGKDRLLA-IKQGDFLAIRSAGAYGFTMSSNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Y Sbjct: 385 AAEVMVDGDQVHLVRERETIESLYA 409 >gi|84684125|ref|ZP_01012027.1| Orn/DAP/Arg decarboxylase, family 2 [Maritimibacter alkaliphilus HTCC2654] gi|84667878|gb|EAQ14346.1| Orn/DAP/Arg decarboxylase, family 2 [Rhodobacterales bacterium HTCC2654] Length = 421 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 55/390 (14%), Positives = 120/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + A+K + + + G S Sbjct: 25 VGTPFYVYSAATLRRHYQVFDEALAGMDHLICYAMKANSNLAVVKLMGDLGAGADVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E G+ ++ +D A+ + + +L + A + Sbjct: 85 EYRRALAAGIPGDRIVFSGVGKTRDEMRLALENGIRQFNVESEPELLALNEVAMSMDTVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNV-----NGLMFHNNCEN 169 + +R+NP V + ++ G + +EI+ + G+ H + Sbjct: 145 PVTIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYAEIRGLPGVKAVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F A + + +I + LGGG+ + + Q ++E Sbjct: 205 TDLAPFRAAYEKVADLTHGLREDGHEIIRLDLGGGLGIPYETSNQAPPLPLEYGQVIRET 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 +I +EPG I N + ++V+ + ++ DS++ V + Sbjct: 265 VGDLGCEIEIEPGRLIAGNAGLMVSSVIYLKHGEGRDFLILDSAMNDLVRPSMYDAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + G C GD F + P+ GD ++F Y + +N Sbjct: 325 VPVIEAAPGVEQAPHDIVGPVCETGDTFAKQRNLPPLGAGDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D +Y + Sbjct: 385 SRPLIPEVLVDGDHFAVIRARPTYEEMLAR 414 >gi|94265420|ref|ZP_01289172.1| Diaminopimelate decarboxylase [delta proteobacterium MLMS-1] gi|94266455|ref|ZP_01290148.1| Diaminopimelate decarboxylase [delta proteobacterium MLMS-1] gi|93452933|gb|EAT03438.1| Diaminopimelate decarboxylase [delta proteobacterium MLMS-1] gi|93454077|gb|EAT04412.1| Diaminopimelate decarboxylase [delta proteobacterium MLMS-1] Length = 416 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 64/384 (16%), Positives = 114/384 (29%), Gaps = 21/384 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+YL L + A+K + + + G S Sbjct: 25 VGTPFYLYSAATLRRHFTAFDGAFAGLDHLSCFAVKASSNIAILRLFARLGGGADIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ E Y+ K A+++ + +L + A +L + Sbjct: 85 ELFRALKAGIAPERIVYSGVGKTRAEIRQALVAGILMFNLESAQELTAIQQCAAELGQTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169 R+NP V ++ G ++ + + + GL H + Sbjct: 145 RVSFRVNPDVDPQTHAYISTGLAENKFGIAIEEALAVYKEARQMANVEIVGLSCHIGSQL 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223 F + ++K I ++ LGGG+ + + + L++ Sbjct: 205 TQVSPFVDTVDKLKKFMAELNGAGINIRYLDLGGGLGINYQGENPPEPAEYGMALRQALG 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280 + LEPG IV N L T VL KN V+VD+ + L Sbjct: 265 DLPCTLILEPGRVIVGNAGILVTRVLFTKSGRKNFVVVDAGMNDLARPSLYDAYHAIQPV 324 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 G A V G C GD D ++ Y + +N Sbjct: 325 TRREDGQMVADVVGPICETGDFLARGREIARAVPDDLLAVMSAGAYGFTMASNYNSRPRV 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D ++ R +Y D Sbjct: 385 PEVLVSEDQFVEIRRRETYEDLVR 408 >gi|77163847|ref|YP_342372.1| diaminopimelate decarboxylase [Nitrosococcus oceani ATCC 19707] gi|254436067|ref|ZP_05049574.1| diaminopimelate decarboxylase [Nitrosococcus oceani AFC27] gi|76882161|gb|ABA56842.1| diaminopimelate decarboxylase [Nitrosococcus oceani ATCC 19707] gi|207089178|gb|EDZ66450.1| diaminopimelate decarboxylase [Nitrosococcus oceani AFC27] Length = 417 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 129/385 (33%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + ++ A+K + + + L + G S+ E Sbjct: 27 DTPCYVYSRAAIEHQWRAFDQAFEKHPHQICYAVKANSNLAVLNILARLGSGFDIVSVGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K D A+ + ++L + + A KL + Sbjct: 87 LERVLAAGGDPGRIVFSGVGKRADEMERALAVGIACFNVESEAELIRLNEIAGKLEQRAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G + + ++ G+ H + Sbjct: 147 VSLRVNPDVDARTHPYIATGLRDNKFGIEIDQALAVYARAATLPHIDILGVDCHIGSQLT 206 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 S F A L+ + + +I I LGGG+ +D + + L++ Sbjct: 207 SLSPFLAALERVLALVDQLAERGIKIRHIDLGGGLGIIYRDEAPPSPQQYAAALRQKLAG 266 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++I++EPG AIV N L T + + + KN IVD+++ + L I Sbjct: 267 RNLEIWIEPGRAIVGNGGVLLTRIEYLKQAPQKNFAIVDAAMNDLLRPALYDAWQEIIPV 326 Query: 284 ----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P V G C GD G+ ++ GD + Y + +N Sbjct: 327 AVDATGEPLFFDVVGPVCETGDFLGKRRQLA-IEAGDLLVVRAAGAYGFTMSSNYNSRPR 385 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + + Y Sbjct: 386 AAEIMVDGAEAHLVRERETVESLYR 410 >gi|32267006|ref|NP_861038.1| diaminopimelate decarboxylase [Helicobacter hepaticus ATCC 51449] gi|32263058|gb|AAP78104.1| diaminopimelate decarboxylase [Helicobacter hepaticus ATCC 51449] Length = 424 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 121/386 (31%), Gaps = 29/386 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ D +++ K + ALK + + L Q G S+ E Sbjct: 14 QTPLYVYDLERITQAFCAIKDAFKARKSLICYALKANSNLSIIHHLAQLGSGADCVSIGE 73 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119 V ++ K D + + +L + + A+KL K Sbjct: 74 VRRALRAGIPKYKIIFSGVGKQDNEIEEALQSDILFLNVESEEELLRIESIAKKLDKIAR 133 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170 + R+NP++ ++ G + I N G+ FH + Sbjct: 134 ISVRVNPNIDAKTHPYISTGLNENKFGVDIEQAKSMYIFAKNAQFLEPIGIHFHIGSQIT 193 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +++ +GGGI D D+ Q + E Sbjct: 194 DLEPIKQSAQKIAQLTHSLLALKIDLKFFDIGGGIGIRYTDESLINPYDYAQAILEALYG 253 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +V + L T VL N K VIVD+++ + LY+ + + Sbjct: 254 LDLTIICEPGRFLVGESGVLLTRVLYEKHNGHKRFVIVDAAMNDLMRPA-LYRATHQVEY 312 Query: 284 NTGPYT---------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + G C + D + P++ GD + ++ Y + + + Sbjct: 313 FLKDKRVDSSLESSLCDIVGPICESSDYLAKNIKLPPLQAGDVLVLKNAGAYGYSMASNY 372 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN 360 N P S+ Sbjct: 373 NTRPRPAEVALMQGNARLIKHRESFE 398 >gi|189466064|ref|ZP_03014849.1| hypothetical protein BACINT_02434 [Bacteroides intestinalis DSM 17393] gi|189434328|gb|EDV03313.1| hypothetical protein BACINT_02434 [Bacteroides intestinalis DSM 17393] Length = 366 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 120/367 (32%), Positives = 192/367 (52%), Gaps = 9/367 (2%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 +D++ L NL + AGV+++LA K FA W F +Y++ +T+SS+YE L E Sbjct: 1 MDEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYEARLALE 60 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGLRINPSV 126 +FG + H Y+ AY + + ++ I FN++SQ +F K G+RINP Sbjct: 61 EFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFCRFYPAVVKEGSGISCGIRINPEY 120 Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 S + L +P P +R G E+ + + G H +CE+ S+ LK++E++F Sbjct: 121 SEVETELYNPCAPGTRFGITADLLTETLPQGIEGFHCHCHCESSSYE-LERTLKHLEEKF 179 Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLN 245 ++ QI+W++LGGG T KDY V+ L + ++ +I LEPG A T L Sbjct: 180 SYWFPQIKWLNLGGGHLMTRKDYDVEHLIHLLNDLRSRHPHLRIILEPGSAFTWQTGVLT 239 Query: 246 TTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAG 300 + V+DI E+ + + S H+PD L + G + + G SCL+G Sbjct: 240 SEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPAVCGAEMGNNGCHVYRLGGNSCLSG 299 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 D G++ F+ ++IG+RI FED+ Y + + N FNGI+ P IA+ DG + R+FSY Sbjct: 300 DYMGDWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAMWTKDGKAEIFRQFSYE 359 Query: 361 DYYNNLS 367 DY + +S Sbjct: 360 DYRDRMS 366 >gi|253702729|ref|YP_003023918.1| diaminopimelate decarboxylase [Geobacter sp. M21] gi|251777579|gb|ACT20160.1| diaminopimelate decarboxylase [Geobacter sp. M21] Length = 417 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 119/385 (30%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ K L + A + ++K + + T G S Sbjct: 25 VGSPVYIYSKATLERHYKAMDDAFAQAPHTICYSVKANSNLAVLKTFVNLGGGVDIVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y+ K E A + +L++ + A ++ +K Sbjct: 85 ELYRALAAGVDPKKVVYSGVGKRDEEIAYALESGILMFNIESEQELDRISEVAGRIGRKA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 G+ R+NP V ++ G + +E + + G+ H + Sbjct: 145 GIAIRVNPDVDPQTHPYITTGLKKAKFGINIERALEQYQRAKGLADIEILGIDCHIGSQL 204 Query: 170 KSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223 F +K +++ + ++ LGGG+ D ++E ++ Sbjct: 205 TKVSPFVDAIKKLKRLLEGVRGMGIDVRYLDLGGGLGIQYDDEAPPLPADYGSSIQEETK 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---A 279 + + EPG +V N L L + KN VIVD+ + L Sbjct: 265 DLGLHLIFEPGRNLVGNAGILVGKCLYTKKGEEKNFVIVDAGMNDLARPALYGSFHGVRP 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G + G C +GD + + GD I+F Y + +N Sbjct: 325 VLRNQDGVIEGDIVGPICESGDFLVKEREIPNFRQGDLIAFMSAGAYGFTMSSNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D D Sbjct: 385 AAEVMVDGDKFEVVRDREKLEDLIR 409 >gi|312963815|ref|ZP_07778286.1| Diaminopimelate decarboxylase [Pseudomonas fluorescens WH6] gi|311281850|gb|EFQ60460.1| Diaminopimelate decarboxylase [Pseudomonas fluorescens WH6] Length = 415 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 120/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRSFTDALNGIPHLVCYAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + G + ++ +D A+ + +L + + A + Sbjct: 86 LERVLAAGGQADKIVFSGVGKTRDDMRRALEVGVHCFNIESTDELERLQVVAAEMGVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G D + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYIRAAQLPNLEVLGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 + F L + G ++ I LGGG+ +D ++ E+ Sbjct: 206 TLPPFIDALDRLLALTDRLGDCGIYLQHIDLGGGVGVQYRDEEPPLIADYIQAVRERIEG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLTLMFEPGRYIVANAGVLLTQVEYLKHTEYKDFAIVDAAMNDLIRPALYQAWMNVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + G C GD + ++ GD ++ Y + +N Sbjct: 326 TPRASVARAYDIVGPICETGDFLAKDRQLA-LEEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + R + + Y Sbjct: 385 AEVLVDGDQAFEVRRRETVAELYA 408 >gi|330998056|ref|ZP_08321884.1| carboxynorspermidine decarboxylase [Paraprevotella xylaniphila YIT 11841] gi|329569145|gb|EGG50936.1| carboxynorspermidine decarboxylase [Paraprevotella xylaniphila YIT 11841] Length = 396 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 130/386 (33%), Positives = 192/386 (49%), Gaps = 22/386 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+I++ L NL+ + + AGV+++LA K FA W F +Y+ TT+SSLY Sbjct: 11 VPTPCYIIEEDLLRRNLEQIRDVSRRAGVEIILAFKAFALWKSFPVFREYISHTTASSLY 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-------KAQKL 114 E L E+FG + H Y+ AY + + D +LS + FN++SQ +F + Sbjct: 71 EARLAAEEFGSKAHTYSPAYTERDFDRILSYSSHVTFNSMSQYARFYPSVEEYSRLHPEE 130 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 GLRINP S + L +P P SR G +S + G H +CE+ S Sbjct: 131 RVSCGLRINPEYSEIEVDLYNPCAPGSRFGMMASQLPDSLPAGIEGFHCHCHCESSS-EA 189 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEP 233 L +IE++FG ++++++W++LGGG T KDY V+ LK E+Y + LEP Sbjct: 190 LEHTLLHIEEKFGGWLSRLKWLNLGGGHLMTRKDYDVERLVAILKGLKERYPNLTVILEP 249 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPYT--- 289 G A T L +V+D+ EN + D S H+PD L + Sbjct: 250 GSAFAWQTGPLVASVVDVVENKGIRTAILDVSFTCHMPDCLEMPYQPVVRNAETMEPDAV 309 Query: 290 ---------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G SCL+GD G + F P+ GDRI FED+ Y + N FNGI P Sbjct: 310 RRAAPEENVYRLGGNSCLSGDYMGAWRFGHPLASGDRIIFEDMIHYTTVKTNMFNGIRHP 369 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNNL 366 IA+ + DGT++ R FSY DY + + Sbjct: 370 DIAMLHSDGTLEYYRRFSYEDYRDRM 395 >gi|260431546|ref|ZP_05785517.1| diaminopimelate decarboxylase [Silicibacter lacuscaerulensis ITI-1157] gi|260415374|gb|EEX08633.1| diaminopimelate decarboxylase [Silicibacter lacuscaerulensis ITI-1157] Length = 421 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 120/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ LL + + A+K + + TL Q G S Sbjct: 25 VGTPFYIYSTATLLRHYRLFDEALAGTDHLVCYAMKAASNQAILKTLAQAGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E + G+ ++ K E A+ + ++ A +L Sbjct: 85 EYLRAKAAGVPGDKIVFSGVGKTAEEIRTALTGGIRQFNVESEPEMEVINAVALELGVIA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + R+NP V + ++ G + V G+ H + Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIARAPQVYAHAASLPGLKVVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + I + LGGG+ ++ +KE Sbjct: 205 TDLEPFRLAYSKVAELTEQLRAQGHDIRRLDLGGGLGIPYARSNEAPPLPVEYGAMIKET 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N + + V+ + ++ +I+D ++ + + Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSKVIYVKSGEGRDFLILDGAMNDLIRPAMYDAYHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + G C GD F + P++ GD ++F Y + +N Sbjct: 325 VPVIEPAPGVEQRPYDIVGPVCETGDTFAKQRNMPPLRPGDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + N D ++++ N Sbjct: 385 TRPLIPEVLVNGDQFAVIRERPTFDEIINR 414 >gi|330892010|gb|EGH24671.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. mori str. 301020] Length = 415 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 122/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + E ++ ++ A+ + +L + ++ A +L Sbjct: 86 LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELDVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G D + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L ++ G + I LGGG+ +D +K E+ + Sbjct: 206 TLEPFIDALARLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + ++ EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLGLFFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDSEPCAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + + Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408 >gi|330984813|gb|EGH82916.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 415 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 121/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + E ++ ++ A+ + +L + ++ A +L Sbjct: 86 LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELDVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G D + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L ++ G + I LGGG+ +D +K E+ + Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + + Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408 >gi|104784267|ref|YP_610765.1| diaminopimelate decarboxylase [Pseudomonas entomophila L48] gi|95113254|emb|CAK17982.1| diaminopimelate decarboxylase [Pseudomonas entomophila L48] Length = 415 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 56/384 (14%), Positives = 116/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRSYTDALQGVEHLVCFAVKANSNLGVLNLLARLGAGFDIVSGGE 85 Query: 63 VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + G + ++ ++ A+ + +L + + A Sbjct: 86 LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESSDELERLQVVAAEMGKTAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + +V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLDVVGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 + F L + + + LGGG+ +D ++ E+ Sbjct: 206 TVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGVGVRYRDEQPPVLADYIQAIRERVGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + I+D+++ + L A Sbjct: 266 RELALVFEPGRYIVANGGVLLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMDVSAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD G+ + GD ++ Y + +N Sbjct: 326 KPREGEGRAYDLVGPICETGDFLGKDRVL-DLAEGDLLAVRSAGAYGFVMSSNYNTRGRC 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + R + + + Sbjct: 385 AEVLVDGDQAFEVRRRETVAELFA 408 >gi|251772324|gb|EES52892.1| diaminopimelate decarboxylase [Leptospirillum ferrodiazotrophum] Length = 413 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 104/384 (27%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ K+ L+ + + A+K + L + G S E Sbjct: 26 GSPLYIYSKKALVERIRAYREAFAAHPTLVAYAMKANGNLAILSLLAKEGAGIDVVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + + + K E A + +L+ + A L Sbjct: 86 LFRARKAGVPADKIVFAGVGKSREEIAYALKEKILMFNVESQDELDHISEVAVALGTQAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V S+ G + + + + G+ H + Sbjct: 146 VALRVNPDVDPKTHPYISTGMKKSKFGIPVERAVAEYQRASTLPGIKIVGIHQHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC---QRLKEFSEK 224 F E ++ + LGGG+ + + + Sbjct: 206 EIAPFRDAFDRLLAFHGELSRAGIKVTHLDLGGGLGIRYRSEEPPSPADLAALVLPRVKD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES---AT 280 V + LEPG +IV N L T VL VI D+ + + L Sbjct: 266 LGVTLVLEPGRSIVGNAGILVTRVLYRKNTAVKSFVIGDAGMNDLLRPSLYGAHHDLLPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD GD I+ Y + + +N P Sbjct: 326 KETKGETIKGDLVGPICETGDFLATDREMPDFAAGDLIAVMSAGAYGFSMASNYNARPRP 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + S+ D Sbjct: 386 AEILVDGSSYRVVRDRESFEDLIR 409 >gi|332655177|ref|ZP_08420918.1| carboxynorspermidine decarboxylase [Ruminococcaceae bacterium D16] gi|332516037|gb|EGJ45646.1| carboxynorspermidine decarboxylase [Ruminococcaceae bacterium D16] Length = 404 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 119/376 (31%), Positives = 191/376 (50%), Gaps = 12/376 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ID+++L N + + G K+LLA K F+ + + L Y+ GT +S LY Sbjct: 27 LPTPAYVIDQERLRENGQVLAALSERTGCKVLLAQKAFSNYDFYPLLAPYLAGTEASGLY 86 Query: 62 EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E LG E+ E H + AY+ E + +L D I+FN++ QL F K ++ K +GL Sbjct: 87 EARLGKEEMPEKEVHVFCGAYRMDEFEELLQYADHIVFNSIHQLKAFGPKGKQAGKSLGL 146 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN----VNGLMFHNNCENKSFLCF 175 RINP S + DP P SR+G + ++ ++GL FH CE S Sbjct: 147 RINPQCSTQEGHAIYDPCAPGSRMGVTRDVWDQEMDEDTLALLDGLHFHTLCEQNSDD-L 205 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 L +E++FG + Q++W+++GGG H T DY + ++ + + V +YLEPGE Sbjct: 206 KTTLHAVEEKFGDILPQMKWLNMGGGHHITRPDYDLATLEACIRHAQQAWGVTVYLEPGE 265 Query: 236 AIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTA 290 A+ N + VLDI + + I+D+S H+PD L I + Sbjct: 266 AVALNAGYFVSRVLDIVENSGTKIAILDASAACHMPDVLEMPYQPPILGADTQPGEGHPF 325 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350 + G +CLAGD+ G++ FE + +GD + F D+A Y + N FNG+ +P + + G Sbjct: 326 RLAGPTCLAGDVVGDYSFESELHVGDLVLFGDMAIYTTCKNNTFNGMPLPDLWRLDRAGN 385 Query: 351 IKAIREFSYNDYYNNL 366 + + +F Y D+ L Sbjct: 386 LTRLTQFGYQDFKMRL 401 >gi|242309007|ref|ZP_04808162.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter pullorum MIT 98-5489] gi|239524431|gb|EEQ64297.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter pullorum MIT 98-5489] Length = 400 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 68/384 (17%), Positives = 122/384 (31%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP + D K+ + ALK + + L G SL E Sbjct: 8 QTPIFAYDFDKIEEYYHQFKSAFSGRKTLICYALKANSNLSVVKKLASLESGADCVSLGE 67 Query: 63 VMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + Y+ ++ +A+ I + ++L K + A+ L+ K Sbjct: 68 IKRAILAGIPPYKIIYSGVGKQEEEIKEAIKLGILFINIESKAELFKVESIAKNLNTKAR 127 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 + R+NP + ++ G + ++ +SE G+ FH + Sbjct: 128 ISIRVNPDIDPQTHPYISTGLKENKFGIEIQEAKSLYLHAHKSEFLEPIGIHFHIGSQLT 187 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I I++ +GGG+ T D D+ Q + E Sbjct: 188 KLQPIYESAQKIAKLVHSLLALKIDIKFFDIGGGLGITYSDETTINPYDYAQSILECLRG 247 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATI-- 281 + I EPG I+ N VL K VIVD ++ + L I Sbjct: 248 LDLTIICEPGRFIIGNAGVFLVKVLYEKISQNKRFVIVDGAMNDLIRPSLYNAYHQIIPL 307 Query: 282 -YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P A + G C +GD G+ P+K GD ++ Y + + +N Sbjct: 308 TQPQGEKSPADIVGPICESGDYLGKNIELPPLKEGDVLAILSSGAYGFSMSSNYNTRPRC 367 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + ++ D Sbjct: 368 AEVAISQGKIKLIRKRETFEDLIA 391 >gi|189485453|ref|YP_001956394.1| carboxynorspermidine decarboxylase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287412|dbj|BAG13933.1| carboxynorspermidine decarboxylase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 368 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 186/366 (50%), Positives = 260/366 (71%), Gaps = 2/366 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TPYYLID++KLL NL Y+R N+G K +LALKCF+ W +FD +++YMDGTTSSS Y Sbjct: 5 IETPYYLIDERKLLRNLKKIKYVRDNSGAKSVLALKCFSTWAVFDLMSKYMDGTTSSSFY 64 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LGHEKFG ETHA++VAY ++ A+ + D IIFN+VSQLN F + H K+GLR Sbjct: 65 EAKLGHEKFGKETHAFSVAYSSDDVKALKNIADKIIFNSVSQLNMFYN--DIKHIKVGLR 122 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP +SYS F LADP+R +SRLG +++I S + ++GLMFH NCEN F FS ML Sbjct: 123 INPGISYSHFDLADPSRKYSRLGVTLEEEIMSVLDKISGLMFHYNCENDDFKSFSVMLDE 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++ + ++EW+SLGGG++FT YP+ FC++LK FS+K++V +YLEPGE + + Sbjct: 183 IAAKYEKVLNKVEWVSLGGGLYFTKDGYPLDKFCKKLKSFSKKHNVLVYLEPGETAIIKS 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 L TT+LDI +N+K++ IVD+S+EAH+ D L+Y+ A I G ++ GRSCLAGD Sbjct: 243 CELITTILDIVKNVKDIAIVDASIEAHMLDLLIYRTPAEINAKDGKNEYIIAGRSCLAGD 302 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 IFGE+ +K+G + F + AGY + +KNWFNG+ MP+I VK +DG ++ I++F YND Sbjct: 303 IFGEYKLADKLKVGSTVHFANAAGYTMVKKNWFNGLKMPSIVVKKLDGKMEIIKKFLYND 362 Query: 362 YYNNLS 367 + +LS Sbjct: 363 FLKDLS 368 >gi|332880291|ref|ZP_08447969.1| carboxynorspermidine decarboxylase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681736|gb|EGJ54655.1| carboxynorspermidine decarboxylase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 396 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 129/386 (33%), Positives = 192/386 (49%), Gaps = 22/386 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+I++ L NL+ + + AGV+++LA K FA W F +Y+ TT+SSLY Sbjct: 11 VPTPCYIIEEDLLRRNLELIRDVSRRAGVEIILAFKAFALWKSFPVFREYISHTTASSLY 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-------KAQKL 114 E L E+FG + H Y+ AY + + D +LS + FN++SQ +F + Sbjct: 71 EARLAAEEFGSKAHTYSPAYTERDFDRILSCSSHVTFNSMSQYVRFYPRVEEYNRLYPEE 130 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 GLRINP S + L +P P SR G + + G H +CE+ S Sbjct: 131 RVSCGLRINPEYSEIEVDLYNPCAPGSRFGMMASQLPDCLPAGIEGFHCHCHCESSS-EA 189 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEP 233 L++IE++FG ++++++W++LGGG T KDY V+ LK E+Y + LEP Sbjct: 190 LEHTLQHIEEKFGRWLSRLKWLNLGGGHLMTRKDYDVERLVAILKGLKERYPDLTVILEP 249 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPYT--- 289 G A T L +V+D+ EN + D S H+PD L + Sbjct: 250 GSAFAWQTGPLVASVVDVVENKGIRTAILDVSFTCHMPDCLEMPYQPAVRNAETVEPDAV 309 Query: 290 ---------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G SCL+GD G + F P+ GDRI FED+ Y + N FNGI P Sbjct: 310 KRATPEENVYRLGGNSCLSGDYMGAWRFGHPLAPGDRIIFEDMIHYTTVKTNMFNGIRHP 369 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNNL 366 IA+ + DGT++ R FSY DY + + Sbjct: 370 DIAMLHSDGTLEYYRRFSYTDYRDRM 395 >gi|83953467|ref|ZP_00962189.1| diaminopimelate decarboxylase [Sulfitobacter sp. NAS-14.1] gi|83842435|gb|EAP81603.1| diaminopimelate decarboxylase [Sulfitobacter sp. NAS-14.1] Length = 421 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 120/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ LL + + A+K + + TL Q G S Sbjct: 25 VGTPFYVYSTATLLRHFKAFDDALDGMDHLVCYAMKANSNQAVLKTLAQAGAGMDVVSAG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E + G+ ++ K A+ + ++ A+ + K Sbjct: 85 EYLRAKAAGVPGDKIVFSGVGKTVSEIRLALEGGIRQFNVESEPEMEVLDAVARSMGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 I +R+NP V + ++ G E V G+ H + Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYRMAAAMPGLEVVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + + I + LGGG+ + D+ +++ Sbjct: 205 TDLTPFELAYQKVAELTEQLRADGHTIRRLDLGGGLGIPYERSNAAPPLPTDYGAMVQKT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N + + V+ + I+D ++ + + Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSEVIYVKSGEGRDFLIIDGAMNDLIRPAMYEAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + G C +GD F + + GD ++F Y + +N Sbjct: 325 IPVVEAEAGAEQQPYDIVGPVCESGDTFAKQRMMPKLVAGDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D R ++++ N Sbjct: 385 SRALIPEVLVHGDQFAVIRRRPTFDEMINR 414 >gi|307353001|ref|YP_003894052.1| carboxynorspermidine decarboxylase [Methanoplanus petrolearius DSM 11571] gi|307156234|gb|ADN35614.1| carboxynorspermidine decarboxylase [Methanoplanus petrolearius DSM 11571] Length = 392 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 139/372 (37%), Positives = 205/372 (55%), Gaps = 8/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IKTP YL+D L +N + + K +G K LLALK FAAW +F +++Y GT SSSL Sbjct: 21 IKTPCYLLDLSALKSNGEIISEVAKESGGKALLALKAFAAWPVFPEISKYYSGTCSSSLD 80 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119 E LG E+FGGE HA++ AYKDCEI+ + C + FN++SQ + K + G Sbjct: 81 ETRLGFEEFGGEVHAFSPAYKDCEIEEYIRMCSHLSFNSLSQWERHKRTILDSEKKVSCG 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LR+NP + + +P RP SRLG + + + + + GL FH CEN L Sbjct: 141 LRVNPEHCEVETAIYNPCRPGSRLGIRAGELENFDFEGIEGLHFHALCENN-ADALERTL 199 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 E+ F ++ ++W++ GGG H T KDY +KEF +K+ ++Y+EPGEA Sbjct: 200 DAFEERFASYLDGMKWVNFGGGHHITRKDYDTGLLIDLIKEFRKKWGCEVYIEPGEACAL 259 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 N L + V+DI +N + IVD+S AH+PD L I P YT + G Sbjct: 260 NAGWLISEVVDIKDNDGMIAIVDASATAHMPDVLEMPYRPYIVGSAKPGKKKYTYRLGGP 319 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAI 354 SCL+GD G + F+ +K GD+++F D+A Y + + FNGI +P I + + +I+ + Sbjct: 320 SCLSGDDIGTYSFDCELKPGDKLAFTDMAHYTMVKNTTFNGIRLPDILLWDPEKDSIEVL 379 Query: 355 REFSYNDYYNNL 366 R F Y D+ + L Sbjct: 380 RTFGYEDFRSRL 391 >gi|126740531|ref|ZP_01756218.1| diaminopimelate decarboxylase [Roseobacter sp. SK209-2-6] gi|126718332|gb|EBA15047.1| diaminopimelate decarboxylase [Roseobacter sp. SK209-2-6] Length = 421 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 62/390 (15%), Positives = 120/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ LL + + + A+K + + TL Q G S Sbjct: 25 VGTPFYVYSTATLLRHFRLFDEALEGTEHLVCYAMKAASNQAILKTLAQAGAGMDVVSQG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E + G+ ++ + A+ + ++ A +L Sbjct: 85 EYLRAKAAGVPGDRIVFSGVGKTMEEVRVALSGGIRQFNVESEPEMAVINAVALELGVIA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 I +RINP V + ++ G E V G+ H + Sbjct: 145 PITIRINPDVDAKTHAKIATGKSENKFGIPISRAKEVYAHAASLPGLEVVGIDCHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + I + LGGG+ + ++ Q +K+ Sbjct: 205 TDLEPFRLAYEKVAELTEVLRAEGHDIRRLDLGGGLGIPYERSNEAPPLPVEYGQLIKDT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N + + V+ + IVD ++ + + Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSKVIYVKSGEGRDFLIVDGAMNDLIRPAMYEAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + + G C GD F + P+ GD I+F Y + +N Sbjct: 325 VAVDEPAPGVEQQPYDIVGPVCETGDTFAKERMMPPLAAGDLIAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D R Y++ N Sbjct: 385 SRPLIPEVLVHGDQFAVIRRRPDYDEMINR 414 >gi|85859277|ref|YP_461479.1| diaminopimelate decarboxylase [Syntrophus aciditrophicus SB] gi|85722368|gb|ABC77311.1| diaminopimelate decarboxylase [Syntrophus aciditrophicus SB] Length = 427 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 71/385 (18%), Positives = 113/385 (29%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+YL L N+ + A+K + + L G S Sbjct: 25 VGTPFYLYSHATLRNHFRVFAEAFAKVPSIICFAVKANSNLAVLRVLIAEGGGVDIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ Y+ K + ++ +L AQ L Sbjct: 85 ELYRALQAGVEPGKVVYSGVGKRVDEIEYALRSGILMFNVESLQELEVINRCAQNLGVSA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN 169 G LR+NP V ++ G + + ++ G+ H + Sbjct: 145 GIALRVNPDVDPKTHPHISTGLKENKFGIDIERSLETYRHARSLQHLDIRGVSCHIGSQV 204 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE--- 223 F L+ + + I ++ LGGG+ T + K E Sbjct: 205 TRLSPFLEALERLSLLVHQLKREDFDIRYVDLGGGLGITYNQEMPPHPSEYAKAILETSR 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES---A 279 EPG IV N L T VL + KN +IVD+ + V L Sbjct: 265 DLDCTFIFEPGRVIVGNAGILVTRVLYTKSNDNKNFIIVDAGMNDLVRPSLYNSFHAIRP 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I N A V G C +GD + K GD ++ Y + +N Sbjct: 325 VIEENRKEIIADVVGPICESGDYLAKARKLKDFHRGDLLAVFSAGAYGFTMASNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + D R +Y D + Sbjct: 385 IPEIMVREDQYYVVRRRETYADLIS 409 >gi|260591034|ref|ZP_05856492.1| carboxynorspermidine decarboxylase [Prevotella veroralis F0319] gi|260536899|gb|EEX19516.1| carboxynorspermidine decarboxylase [Prevotella veroralis F0319] Length = 388 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 123/375 (32%), Positives = 197/375 (52%), Gaps = 14/375 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++++L NL + K A V+++LA K +A W F +Y+ TT+SSLYE Sbjct: 14 PMYILEEERLRKNLQLIASVAKEADVEIILAFKAYALWRTFPIFREYIHATTASSLYEAR 73 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRI 122 LG E+FG TH ++ Y D EID + ++FN++SQ ++ +A+ GLR+ Sbjct: 74 LGFEEFGAPTHTFSPGYTDYEIDDIARCSSHLVFNSLSQFERYHVRAKLENTRLSFGLRV 133 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S + ++ +P P +R G + + V+G H +CE+ S F L++I Sbjct: 134 NPEYSEVETLIYNPCAPGTRFGITSSKLPATLPEGVDGFHIHCHCESGS-DVFERTLEHI 192 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E +F ++ Q++W++ GGG T KDY V LKEF ++Y ++ LEPG A T Sbjct: 193 EAKFANWFPQLKWVNFGGGHLMTRKDYDVPRLIHALKEFKKRYPWLKVILEPGSAFAWQT 252 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT---------GPYTAM 291 L VLD+ E+ + + S H+PD L + G T Sbjct: 253 GPLVAQVLDVVEDHGIKTAILNVSFTCHMPDCLEMPYHPAVRNAELVDEDGSAEGENTYR 312 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + SCL+GD G + F+ P++IG+ I FED+ Y + N FNGI+ P IA+ + D + Sbjct: 313 LGANSCLSGDWMGSWRFDHPLQIGENIIFEDMLHYTTVKTNMFNGISHPAIALLHPDNEL 372 Query: 352 KAIREFSYNDYYNNL 366 + +REF+Y DY + + Sbjct: 373 EVLREFTYEDYRDRM 387 >gi|71738109|ref|YP_277093.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482608|ref|ZP_05636649.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624630|ref|ZP_06457584.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651144|ref|ZP_06482487.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aesculi str. 2250] gi|71558662|gb|AAZ37873.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|320326562|gb|EFW82613.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. glycinea str. B076] gi|320331372|gb|EFW87313.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. glycinea str. race 4] gi|330870014|gb|EGH04723.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330881320|gb|EGH15469.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. glycinea str. race 4] gi|331012751|gb|EGH92807.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 415 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 120/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + E ++ ++ A+ + +L + ++ A +L Sbjct: 86 LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELDVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G D + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L ++ G + I LGGG+ +D +K E+ + Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDGEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + + Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408 >gi|259415035|ref|ZP_05738957.1| diaminopimelate decarboxylase [Silicibacter sp. TrichCH4B] gi|259348945|gb|EEW60699.1| diaminopimelate decarboxylase [Silicibacter sp. TrichCH4B] Length = 421 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 121/390 (31%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ LL + + + A+K + + TL G S Sbjct: 25 VGTPFYVYSTATLLRHFRLFDEALEGTDHLVCYAMKAASNQAILKTLAAAGAGMDVVSEG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E G+ ++ K + + ++ A +L Sbjct: 85 EYRRAKAAGVPGDKIVFSGVGKTADEIRCALSGGIRQFNVESEPEMEVINAVALELGTTA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + R+NP V + ++ G E V G+ H + Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYAHAASLPGLEVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + I + LGGG+ ++ Q +KE Sbjct: 205 TELAPFRLAYQKVAELTQALRDDGHDIRRLDLGGGLGIPYTRSNEAPPLPVEYGQMIKEE 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG + N + + V+ + E ++ +I+D ++ + + Sbjct: 265 LGHLGCEIEIEPGRLVAGNAGVMVSKVIYVKEGEGRDFLILDGAMNDLIRPAMYEAYHDI 324 Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I P + G C +GD F + P+ GD ++F Y + +N Sbjct: 325 IPVVEPTPGLEPKPYDIVGPVCESGDTFAKQRQMPPLGAGDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D + ++++ N Sbjct: 385 SRPLIPEVLVHGDQFAVIRQRPTFDEMINR 414 >gi|302189433|ref|ZP_07266106.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae 642] Length = 415 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 122/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + E ++ ++ A+ + +L + ++ A +L+ Sbjct: 86 LERVLAAGGKAERIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L ++ G + I LGGG+ +D +K E+ + Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N TL T V + IVD+++ + L A Sbjct: 266 RDLGLLFEPGRFIVANAGTLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMEVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + + Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408 >gi|300021574|ref|YP_003754185.1| diaminopimelate decarboxylase [Hyphomicrobium denitrificans ATCC 51888] gi|299523395|gb|ADJ21864.1| diaminopimelate decarboxylase [Hyphomicrobium denitrificans ATCC 51888] Length = 423 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 64/388 (16%), Positives = 118/388 (30%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + ++ + A+K + + T+ + G S Sbjct: 25 VGTPFYVYSTATLERHYKVLAEAFRDQKALICFAVKANSNQAVLATMARLGAGMDVVSEG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF----KDKAQKLHK 116 E+ + K A + FN S+ A Sbjct: 85 ELRRARAAGVPASKIIFAGVGKTRGEMAYALEEGILGFNVESEPELLALSEVATALGKTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I +R+NP V + ++ G +D E + ++G+ H + Sbjct: 145 SIAIRVNPDVDAKTHAKISTGKAENKFGVPFEDARELYARAATLPGLKISGIHMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-----DYPVKDFCQRLKEF 221 F + ++E + +GGG+ + ++ +K Sbjct: 205 TDLAPFRDAFALLHDLARDLIADGIRLEHLDIGGGLGVPYRGANDIPPTPDEYAAVVKAA 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 ++I LEPG IV N L T V + E K IVD+++ + L Sbjct: 265 LGDLGLKIVLEPGRMIVGNAGLLVTRVTYVKEGEDKTFTIVDAAMNDLIRPTLYEAYHEI 324 Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P + G C GD E P + GD ++ Y + +N Sbjct: 325 WPVAEQRNDMAPVQQDIVGPVCETGDFLAEDRALPPSEPGDLLAVMTAGAYGAVMSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + + D SY+D Sbjct: 385 TRLLVPEVLVSGDRYAVVRPRPSYDDLI 412 >gi|303248021|ref|ZP_07334287.1| diaminopimelate decarboxylase [Desulfovibrio fructosovorans JJ] gi|302490578|gb|EFL50483.1| diaminopimelate decarboxylase [Desulfovibrio fructosovorans JJ] Length = 412 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 65/384 (16%), Positives = 114/384 (29%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + ++K + + TL G S E Sbjct: 26 GTPLYIYSAATLRRHFAAFDSAFDGLPHLTCFSVKANSNLAVLRTLGAMGAGVDIVSGGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + Y+ K N ++ +L + A +L + Sbjct: 86 LYRALAAGIDPAKIVYSGVGKRGNEIEEALNAGILMFNVESMGELERISRIAARLGKNAN 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170 + LRINP+V ++ G + + + + + G+ H + Sbjct: 146 VSLRINPNVDPKTHPYISTGLKKNKFGLDMETSLAAYARAMELPGVTPVGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEK 224 S F L I ++ LGGG+ + + L + Sbjct: 206 SIEPFLEALDKILIFREKLVAMGISPRYLDLGGGLGIQYNEEEPPHPREFGQALTKALGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + LEPG IV N L T V+ + K+ VIVD+++ + L A Sbjct: 266 LPLTLVLEPGRVIVGNAGILVTEVVYTKKTPSKDFVIVDAAMNDLIRPSLYDSYHAISEV 325 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 V G C +GD V G+ ++ Y + +N Sbjct: 326 RPAERDTLNVDVVGPICESGDFLARDRELPAVAPGEYLAVYSAGAYGFTMSSNYNSRPRA 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D A R +Y D Sbjct: 386 AEVLVDGDTVTLARRRETYEDLVA 409 >gi|99078471|ref|YP_611729.1| diaminopimelate decarboxylase [Ruegeria sp. TM1040] gi|99035609|gb|ABF62467.1| diaminopimelate decarboxylase [Ruegeria sp. TM1040] Length = 421 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 60/390 (15%), Positives = 123/390 (31%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ LL + + + A+K + + TL G S Sbjct: 25 VGTPFYVYSTATLLRHFRLFDEALEGTDHLVCYAMKAASNQAILKTLAAAGAGMDVVSEG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E G+ ++ K E A+ + +++ A +L Sbjct: 85 EYRRAKAAGVPGDKIVFSGVGKTAEEIRTALTGGIRQFNVESEPEMDVINAVALELGVTA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + R+NP V + ++ G V G+ H + Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIAKARAVYAHAASLPGLEVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + I + LGGG+ ++ Q +KE Sbjct: 205 TDLEPFRLAYQKVAELTQALRADGHDIRRLDLGGGLGIPYTRSNEAPPLPVEYGQMIKEE 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG + N + + V+ I E ++ +I+D ++ + + Sbjct: 265 LGHLGCEIEIEPGRLVAGNAGLMVSKVIYIKEGEGRDFLILDGAMNDLIRPAMYEAHHDI 324 Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I P + G C +GD F + P+ GD ++F Y + +N Sbjct: 325 IPVVEPTPGLEPQPYDIVGPVCESGDTFAKQRLMPPLAAGDLVAFRSAGAYGAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D + ++++ N Sbjct: 385 SRPLIPEVLVHGDQFAVIRQRPTFDEMINR 414 >gi|229593312|ref|YP_002875431.1| diaminopimelate decarboxylase [Pseudomonas fluorescens SBW25] gi|229365178|emb|CAY53443.1| diaminopimelate decarboxylase [Pseudomonas fluorescens SBW25] Length = 415 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 119/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + ++ ++ A+ + +L + + A + Sbjct: 86 LERVLAAGGKADKIVFSGVGKTREDMRRALEVGVHCFNIESTDELERLQGVAAEMGVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G D + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYIRAAQLPNLEVLGVDCHIGSQLT 205 Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 FL L + G + I LGGG+ +D ++ E+ Sbjct: 206 SLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGVGVRYRDEEPPLIADYIQAVRERIEG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMNVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 N+ + G C GD + ++ GD ++ Y + +N Sbjct: 326 TPRNSEARAYDIVGPICETGDFLAKDRQLA-LEEGDLLAVHSAGAYGFVMSSNYNTRGRT 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + R + + Y Sbjct: 385 AEVLVDGDQAFEVRRRETVAELYA 408 >gi|313501204|gb|ADR62570.1| LysA_2 [Pseudomonas putida BIRD-1] Length = 415 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85 Query: 63 VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G + ++ ++ A+ + +L + + A ++ K Sbjct: 86 LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEMGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---K 224 + F L + + + LGGG+ +D +K E + Sbjct: 206 TVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGVGVRYRDEQPPQVADYIKAIRERVGE 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + I+D+++ + L A Sbjct: 266 RDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMGVSAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD G+ + GD ++ E Y + +N Sbjct: 326 KPRAGEGRAYDLVGPICETGDFLGKDRVL-NLAEGDLLAVESAGAYGFVMSSNYNTRGRC 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + R + + Y Sbjct: 385 AEILVDGDQAFEVRRRETVAELYA 408 >gi|90019887|ref|YP_525714.1| diaminopimelate decarboxylase [Saccharophagus degradans 2-40] gi|89949487|gb|ABD79502.1| diaminopimelate decarboxylase [Saccharophagus degradans 2-40] Length = 414 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 59/385 (15%), Positives = 113/385 (29%), Gaps = 23/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ K N + A+K + + L + G S Sbjct: 25 LGTPCYVYSKAAFTRAYQDYANALGNHPGMVCYAVKANSNIAVLQVLAKLGAGFDIVSSG 84 Query: 62 EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ ++ +A+ + ++L + D A +L Sbjct: 85 ELRRVLKAGGQPNRIIFSGVGKTREEMREALEVGIACFNVESEAELERLADVAAELGVVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I LR+NP V ++ G + + V G+ H + Sbjct: 145 SISLRVNPDVDAKTHPYISTGLKENKFGIDIQRAPAVYARASELASLKVVGVDCHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223 F L + + IE + +GGG+ T +D +K Sbjct: 205 TELTPFLDALDRLLQLVDTLAETGITIEHLDIGGGLGVTYRDEVPPAVADYLTQIKAKLG 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 + I +EPG +I N + T V + I+D ++ ++ L Sbjct: 265 DRKLAIIMEPGRSIAANAGVMLTEVEFLKPTEHKNFAIIDGAMNDNIRPALYQAWQDVKP 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G C GD + ++ GDR++ Y + +N Sbjct: 325 LSQREGETQQWDLVGPVCETGDFLAKDRALA-LQAGDRLALMSSGAYGFVMSSNYNTRGR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D S+ D Sbjct: 384 AAEVLVDGDKYFVVRERESFEDLIR 408 >gi|302670560|ref|YP_003830520.1| carboxynorspermidine decarboxylase NspC [Butyrivibrio proteoclasticus B316] gi|302395033|gb|ADL33938.1| carboxynorspermidine decarboxylase NspC [Butyrivibrio proteoclasticus B316] Length = 408 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 133/404 (32%), Positives = 216/404 (53%), Gaps = 40/404 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IKTP Y+ID++KL NL+ +++ +G ++LLA K ++ + + + +Y+ G T+S L+ Sbjct: 6 IKTPAYVIDEKKLKENLEILDRVQRESGARILLAQKAYSVYQTYPLIARYLTGATASGLF 65 Query: 62 EVMLGHEKFG----------GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 E L HE+ E H Y A++D E++ + + CD I+FN+++QL + Sbjct: 66 EARLAHEEMKLSEQDDHEKKIENHVYEPAFEDDEMEELCNICDHIVFNSLNQLEHHRKTW 125 Query: 112 QKLHKK----IGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166 + + +GLRINP S + + DP SRLG K D + + V G+ FH Sbjct: 126 ESAVRDGRVSVGLRINPEFSTQEEHEIYDPCSEGSRLGIKLADMPDELPEGVEGIHFHTL 185 Query: 167 CENKSFLCFSAMLKNIEKEFGHF-------------------ITQIEWISLGGGIHFTDK 207 CE F ++E+ FG F +I+WI+LGGG H T + Sbjct: 186 CEQD-FEPLKQTFHHVEENFGKFFPTKDHTDESANDNNEHGSGRKIKWINLGGGHHITRE 244 Query: 208 DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVE 266 DY V +K+ +KY +++YLEPGEAI + L TT++DI + + V++ D+S Sbjct: 245 DYNVDGLITFIKDIKKKYDIEVYLEPGEAIALDAGYLVTTIMDIVKTERMPVLILDTSAA 304 Query: 267 AHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 H+PD L + + P + + R+CLAGDI G++ F+ + IGDR+ FED Sbjct: 305 CHMPDVLEMPYRPPLRDSEQPGELEFNYRLSSRTCLAGDIIGDYSFDHELHIGDRLVFED 364 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 +A Y++ + N FNG+ +P I + + +G I IR+F Y+D+ N L Sbjct: 365 MAIYSMVKNNTFNGMPLPDIDIMHENGKIDVIRKFGYDDFKNRL 408 >gi|159045599|ref|YP_001534393.1| diaminopimelate decarboxylase [Dinoroseobacter shibae DFL 12] gi|157913359|gb|ABV94792.1| diaminopimelate decarboxylase [Dinoroseobacter shibae DFL 12] Length = 431 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 56/390 (14%), Positives = 118/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + A+K + + L G S Sbjct: 25 VGTPFYVYSTATLTRHFKLFDEALSWGPHLVCFAMKSNSNQAILKLLADLGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHK 116 E G+ ++ K D A+ + ++ + AQ + Sbjct: 85 EYARARAAGVPGDRIVFSGVGKTADEMRMALTGGIRQFNVESEPEMQRLSAVAQGLGMQA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 I +R+NP V + ++ G V G+ H + Sbjct: 145 PITIRVNPDVDAKTHEKIATGKSENKFGIPISRAREVYAQAARLPGIKVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + +I + LGGG+ D+ ++ Sbjct: 205 TELEPFELAYAKVAELTRHLRADGHEITRLDLGGGLGIPYARTNEAPPLPTDYGALIQRT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N L + V+ + + + +I+D+++ + + Sbjct: 265 VGDLGCEIEIEPGRLISGNAGLLVSEVIYVKQGEDRQFLILDAAMNDLIRPSMYGAYHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + G C +GD F + P+ GD ++F Y + +N Sbjct: 325 VPVREAAPGTPTTPYDIVGPVCESGDTFAKSREMVPLTEGDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D + S+++ N Sbjct: 385 TRPLIPEVLVHGDQFAVIRQRPSFDEIINR 414 >gi|26991903|ref|NP_747328.1| diaminopimelate decarboxylase [Pseudomonas putida KT2440] gi|24987026|gb|AAN70792.1|AE016723_4 diaminopimelate decarboxylase [Pseudomonas putida KT2440] Length = 415 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85 Query: 63 VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G + ++ ++ A+ + +L + + A ++ K Sbjct: 86 LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEMGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---K 224 + F L + + + LGGG+ +D +K E + Sbjct: 206 TVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGVGVRYRDEQPPRVADYIKAIRERVGE 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + I+D+++ + L A Sbjct: 266 RDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMGVSAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD G+ + GD ++ E Y + +N Sbjct: 326 KPRAGEGRAYDLVGPICETGDFLGKDRVL-NLAEGDLLAVESAGAYGFVMSSNYNTRGRC 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + R + + Y Sbjct: 385 AEILVDGDQAFEVRRRETVAELYA 408 >gi|325271631|ref|ZP_08138133.1| diaminopimelate decarboxylase [Pseudomonas sp. TJI-51] gi|324103235|gb|EGC00580.1| diaminopimelate decarboxylase [Pseudomonas sp. TJI-51] Length = 415 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRSYTDALQGAEHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85 Query: 63 VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G + ++ ++ A+ + +L + + A ++ K Sbjct: 86 LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEMGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 + F L + + + LGGG+ +D +K E+ Sbjct: 206 TIDPFLDALDRLLVLVDRLAECGIHLRHLDLGGGVGVRYRDEQPPLVADYIKAIRERVGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + I+D+++ + L A Sbjct: 266 RDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMGVSAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD G+ + GD ++ E Y + +N Sbjct: 326 KPRGGEGRAYDLVGPICETGDFLGKDRVL-DLAEGDLLAVESAGAYGFVMSSNYNTRGRC 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + R + + Y Sbjct: 385 AEILVDGDQAFEVRRRETIAELYA 408 >gi|283850737|ref|ZP_06368024.1| diaminopimelate decarboxylase [Desulfovibrio sp. FW1012B] gi|283573980|gb|EFC21953.1| diaminopimelate decarboxylase [Desulfovibrio sp. FW1012B] Length = 412 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 65/384 (16%), Positives = 117/384 (30%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + ++K + + TL G S E Sbjct: 26 GTPLYVYSAATLRRHFTAFDSAFGGLPHLTCFSVKANSNLSVLKTLAAMGAGVDIVSGGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + E Y+ K ++ +L + A++L + Sbjct: 86 LYRALAAGVAPEKIVYSGVGKRAAEIEQALTAGILMFNVESLGELERISAIAKRLGKTAQ 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170 + LRINP V ++ G ++ + + K + G+ H + Sbjct: 146 VSLRINPDVDPKTHPYISTGLKKNKFGLDIENSLAAYAKAMELPNITPVGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 S F L ++ ++ LGGG+ + F + L + Sbjct: 206 SISPFLEALDKILTFREKLCAMGIVPRYLDLGGGLGIQYDEEDPPHPKEFGEALTKALGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + LEPG IV N L T V+ + K+ VIVD+++ + L A Sbjct: 266 LPMTLILEPGRVIVGNAGILVTEVVYTKKTPSKDFVIVDAAMNDLIRPSLYDSFHAIREV 325 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 V G C +GD V G+ ++ Y + +N Sbjct: 326 RPAGRETLNVDVVGPICESGDFLARDRDLPAVAPGELLAVYSAGAYGFTMSSNYNSRPRA 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + A R +Y D Sbjct: 386 AEVLVDGETVTVARRRETYEDLIA 409 >gi|289207307|ref|YP_003459373.1| diaminopimelate decarboxylase [Thioalkalivibrio sp. K90mix] gi|288942938|gb|ADC70637.1| diaminopimelate decarboxylase [Thioalkalivibrio sp. K90mix] Length = 434 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 65/390 (16%), Positives = 126/390 (32%), Gaps = 24/390 (6%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++ TP Y+ + L + ++ A+K +A G+ + L + G S Sbjct: 24 LVGTPAYVYSRATLERHYRAFSEALIGTPHQVCFAVKANSALGVLNVLARLGAGFDIVSG 83 Query: 61 YEVMLG-HEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ ++ K A+ + +L + + A + Sbjct: 84 GELERVLRAGGDPAKVVFSGVGKTAAEMRRALKVGIHCFNVESAPELERLESIAAEMGVT 143 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168 + +R+NP V ++ G ++ +S+ G+ FH + Sbjct: 144 APVSIRVNPDVDAETHPYIATGLRENKFGVAIEEAPALYARVRDSQHLEATGVDFHIGSQ 203 Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFS 222 F+ LK + + ++E I +GGG+ +D + + L++ Sbjct: 204 LTRIDPFTDALKRVLTLVDQLAADGIELEHIDVGGGLGVRYRDETPPEPDAWASALRKVM 263 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI 281 + S+++ LEPG AI N T V + + IVD ++ + L I Sbjct: 264 GERSLKVLLEPGRAIAANAGVFLTRVEYLKHTEAHDFAIVDGAMNDLLRPALYGAWQEII 323 Query: 282 ----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T T + G C GD G + GD ++ Y +N Sbjct: 324 PVVQRRETAARTYDIVGPVCETGDFLGRERELA-LAAGDVLAVRSAGAYGYVMAGNYNSR 382 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 P + + D R + S Sbjct: 383 PRPPEIMVDGDHFQIINRREQVDHLMMRES 412 >gi|225848225|ref|YP_002728388.1| diaminopimelate decarboxylase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643357|gb|ACN98407.1| diaminopimelate decarboxylase [Sulfurihydrogenibium azorense Az-Fu1] Length = 420 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 125/387 (32%), Gaps = 23/387 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+Y+ K+ +++ ++ K+ + ALK + + ++ G S Sbjct: 30 IGTPFYIYSKKAIIDKINEYKEAFKDYPTLICYALKANSNLSILKIFEEHGLGADIVSGG 89 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHK 116 E+ + Y K N + + +L + A Q Sbjct: 90 ELYKARKVGIPSNKIVYAGVGKTDVEIIYAINENILSFNVESQMELEVINEIAKRQNKKA 149 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 I +RINP V S+ G K ++ E NV G+ H + Sbjct: 150 NISIRINPDVDPKTHPYISTGLKKSKFGIDIGQALDVYKQAVKMENLNVVGIHCHIGSQI 209 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFS 222 + ++ ++ + ++++I +GGG+ + Sbjct: 210 MDVSVYKEAVEKTVDLVFKLKKEGIELQFIDIGGGLGVKYYPEDNPPTAFDLANTVLPIV 269 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI 281 ++ +++ +EPG +++ L T V+ + ++ DS + + + I Sbjct: 270 KQTGLKLIIEPGRSLIAQAGALITKVIFTKDKKDKHFVIVDSGMNDLIRPSIYNAYHHII 329 Query: 282 YPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 A + G C GD FG V GD ++ Y + + +N Sbjct: 330 TVEEKQEKMVADIVGPICETGDFFGLDREIGKVNRGDLLAILTAGAYGSSMASNYNVRPK 389 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNL 366 + + D Y+ + L Sbjct: 390 AIEILVDGDKFKIIKEREDYS-FITKL 415 >gi|330900736|gb|EGH32155.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 415 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 122/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + E ++ ++ A+ + +L + ++ A +L+ Sbjct: 86 LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L ++ G + I LGGG+ +D + +K E+ + Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAAEYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAG 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + + Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408 >gi|88861274|ref|ZP_01135906.1| putative diaminopimelate decarboxylase [Pseudoalteromonas tunicata D2] gi|88816755|gb|EAR26578.1| putative diaminopimelate decarboxylase [Pseudoalteromonas tunicata D2] Length = 416 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 125/385 (32%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + L + G S E Sbjct: 26 GTPCYVYSRATLERHYHAFTDAAAGQHHLVCYAVKANSNLAVLNVLARLGSGFDIVSQGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K + ++L + D A +L + Sbjct: 86 LARVVAAGGDPRKVVFSGVAKTAHEIRYALELGIKCFNVESEAELERISDVATELGQTAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I +R+NP + ++ G + + + G+ FH + Sbjct: 146 ISIRVNPDIDAKTHPYISTGLKENKFGIEIHRAVSVYQHAATLPGISIEGIDFHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F A L I K+ I+ + +GGG+ +P Q ++ SE Sbjct: 206 EVEPFLAALDKVLAIIKQLKTLNIHIKHLDVGGGLGVAYLAEEPPHPSSYVSQLVERLSE 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIY 282 +++ EPG AI N L T V + +N KN IVD+ + + L I Sbjct: 266 FSDLELVFEPGRAIAANAGILITQVEFLKQNQGKNFAIVDAGMNDLLRPSLYQAWQNIIA 325 Query: 283 PNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + P + + G C GD G+ ++ GD ++ Y + + +N Sbjct: 326 VSPRSGTPSSYDIVGPVCETGDFLGKDRELS-LQQGDLLAVRSAGAYGFSMSSNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + + D Y Sbjct: 385 VAEIMVDGATAHEIRKRETIADLYQ 409 >gi|226946776|ref|YP_002801849.1| diaminopimelate decarboxylase [Azotobacter vinelandii DJ] gi|226721703|gb|ACO80874.1| diaminopimelate decarboxylase [Azotobacter vinelandii DJ] Length = 415 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 115/384 (29%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + + + L + G S E Sbjct: 26 GTPTYVYSRAHIEERYRAYADALAGMPHLVCFAVKANSNLAVLNLLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ ++ A+ + +L + ++ A +L Sbjct: 86 LERVLAAGGDPARVVFSGVGKTREDMRRALEVGVHCFNVESDVELERLQEVAAELGVKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G + E V G+ H + Sbjct: 146 VSLRVNPDVDAQTHPYISTGLKENKFGIDIEQAEEVYARAAELPNLEVLGIDCHIGSQLT 205 Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 FL L + I + LGGG+ +D D+ ++E E Sbjct: 206 TLSPFLDTLDRLLLLVDRLAARGIVIRHLDLGGGLGVRYRDEQPPAPGDYIAAVRERIEG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 ++ + EPG +IV N L T V + ++D+++ + L Sbjct: 266 RALALVFEPGRSIVANAGVLLTRVEYLKHTEHKDFAVIDAAMNDLIRPALYQAWMDVVPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + G C GD + + GD ++ Y + +N Sbjct: 326 TPHGGEVCSYDLVGPVCETGDFLAKDRELA-LVEGDLLAVRSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + D Y Sbjct: 385 AEVLVDGERMHLIRRRETIEDLYA 408 >gi|254458023|ref|ZP_05071450.1| carboxynorspermidine decarboxylase [Campylobacterales bacterium GD 1] gi|207085416|gb|EDZ62701.1| carboxynorspermidine decarboxylase [Campylobacterales bacterium GD 1] Length = 377 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 147/372 (39%), Positives = 219/372 (58%), Gaps = 7/372 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IKTP Y+ +++ L NL +++K +G K++LALK FA W F + +Y+ G T+S L+ Sbjct: 7 IKTPCYICEEELLEKNLKLLDHVQKESGAKIILALKGFAMWSTFPQVKEYLHGCTASGLH 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIG 119 E L EKFG E H Y+ AYKD +ID + D ++FN+ SQL K+ D+ I Sbjct: 67 EAKLAFEKFGKEVHTYSPAYKDEDIDEIAQISDHVVFNSPSQLFKYSDRVKKINPDVSIS 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRINP S S + +P +SRLG + E +K++NGL FH CE + +L Sbjct: 127 LRINPEQSASPKDIYNPCGIYSRLGTTLANFDEEVLKHINGLNFHALCEQGADE-LEDVL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 E++F + +++I+ GGG H T K Y V+ + +K+F KY+V++YLEPGEAI Sbjct: 186 VAFEEKFSKYFKGLKYINFGGGHHITKKGYDVEKLIKIIKDFKSKYNVEVYLEPGEAIGW 245 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGR 295 T L ++VLDI N ++ I+D+S EAH+PD L A + + +T G Sbjct: 246 ETGVLVSSVLDIVHNGMDIAILDTSAEAHMPDTLAMPYRADVRDSGEALEKEFTYRFGGN 305 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +CLAGDI G++ F+K +KIGD++ FED Y + FNGI +P++A+ DGT++ ++ Sbjct: 306 TCLAGDIMGDYSFDKVLKIGDKVIFEDQIHYTFVKNTTFNGIKLPSLAIYRKDGTLEVVK 365 Query: 356 EFSYNDYYNNLS 367 EF Y DY N LS Sbjct: 366 EFGYEDYRNRLS 377 >gi|330941151|gb|EGH44030.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 415 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + E ++ ++ A+ + +L + ++ A +L+ Sbjct: 86 LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LR+NP V ++ G + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLKVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L + G + I LGGG+ +D +K E+ + Sbjct: 206 TLEPFIDALDRLLALVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + + Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408 >gi|332977415|gb|EGK14192.1| diaminopimelate decarboxylase [Psychrobacter sp. 1501(2011)] Length = 447 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 66/390 (16%), Positives = 132/390 (33%), Gaps = 26/390 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K+ +L ++ A+K + + L + G S E Sbjct: 54 GTPLYVYSKKAILEAYQAYSDSFAEIDHQVCYAVKANSNLAVLKVLAEAGAGFDLVSSGE 113 Query: 63 VMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + ++ K A+ + ++S+L++ + A ++ Sbjct: 114 LARVLAVGADPKKIVFSGVGKTVSEMKAALQAGIGCFNVESLSELDRLNEVAAEMQVKAP 173 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I +R+NP V ++ G +E+ + G+ H + Sbjct: 174 ISIRVNPDVDAKTHPYISTGLKDNKFGISHDVAVEAYKHANSLANLQIVGIDCHIGSQLT 233 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 F A L + ++E I LGGG+ D V +F L ++ Sbjct: 234 EIDPFVAALDKVCELIDALKQAGIELEHIDLGGGLGVIYIDEQVAEVSEFANALLPKLKQ 293 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283 ++++ EPG +IV N L T V + IVD+++ + L E A I Sbjct: 294 LGLKVFFEPGRSIVANAGVLLTQVEVLKPTEHKNFAIVDAAMNDLIRPALYQAEMAVIPV 353 Query: 284 NTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 N+ P + + G C GD + + +G+ ++ Y + +N Sbjct: 354 NSQPQSQTQEQSWDIVGAVCETGDFLAKKRLLS-LAVGEVLAITGAGAYGFVMSSNYNSR 412 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 P + + D + + ++ S Sbjct: 413 PRPAEVMVSADKHQVVRKRETIEQLFDTES 442 >gi|298489348|ref|ZP_07007362.1| Diaminopimelate decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156139|gb|EFH97245.1| Diaminopimelate decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 415 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + E ++ ++ A+ + +L + ++ A +L Sbjct: 86 LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELDVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G + + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIANAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L ++ G + I LGGG+ +D +K E+ + Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDGEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + + Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408 >gi|148550336|ref|YP_001270438.1| diaminopimelate decarboxylase [Pseudomonas putida F1] gi|148514394|gb|ABQ81254.1| diaminopimelate decarboxylase [Pseudomonas putida F1] Length = 415 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85 Query: 63 VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G + ++ ++ A+ + +L + + A ++ K Sbjct: 86 LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEMGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---K 224 + F L + + + LGGG+ +D +K E + Sbjct: 206 TVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGVGVRYRDEQPPRVADYIKAIRERVGE 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + I+D+++ + L A Sbjct: 266 RDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMGVSAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD G+ + GD ++ E Y + +N Sbjct: 326 KPRAGEGRAYDLVGPICETGDFLGKDRVL-NLTEGDLLAVESAGAYGFVMSSNYNTRGRC 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + R + + Y Sbjct: 385 AEILVDGDQAFEVRRRETVAELYA 408 >gi|15600470|ref|NP_253964.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PAO1] gi|12230897|sp|P19572|DCDA_PSEAE RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|9951590|gb|AAG08662.1|AE004940_6 diaminopimelate decarboxylase [Pseudomonas aeruginosa PAO1] Length = 415 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ +D A+ + +L + + A +L Sbjct: 86 LERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCFNVESGEELERLQRVAAELGVKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + E + V G+ H + Sbjct: 146 VSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEAVYARAAELDHLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 F L+ + I + LGGG+ +D D+ + ++E Sbjct: 206 QLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGLGVRYRDEQPPLAGDYIRAIRERLHG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SAT 280 + + EPG +IV N L T V + IVD+++ + L A Sbjct: 266 RDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVQAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDAAPRRYDLVGPICETGDFLAKDRDLA-LAEGDLLAVRSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + T + R + + Y Sbjct: 385 AEVLVDGEQTHEVRRRETVQELYA 408 >gi|107104378|ref|ZP_01368296.1| hypothetical protein PaerPA_01005454 [Pseudomonas aeruginosa PACS2] gi|218894380|ref|YP_002443250.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa LESB58] gi|254243836|ref|ZP_04937158.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa 2192] gi|126197214|gb|EAZ61277.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa 2192] gi|218774609|emb|CAW30426.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa LESB58] Length = 415 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ +D A+ + +L + + A +L Sbjct: 86 LERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCFNVESGEELERLQRVAAELGVKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + E + V G+ H + Sbjct: 146 VSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEAVYARAAELDHLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 F L+ + I + LGGG+ +D D+ + ++E Sbjct: 206 QLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGLGVRYRDEQPPLAGDYIRAIRERLHG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SAT 280 + + EPG +IV N L T V + IVD+++ + L A Sbjct: 266 RDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVQAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDAAPRRYDLVGPICETGDFLAKDRDLA-LAEGDLLAVRSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + T + R + + Y Sbjct: 385 AEVLVDGEQTHEVRRRETVQELYA 408 >gi|152985290|ref|YP_001351336.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PA7] gi|150960448|gb|ABR82473.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PA7] Length = 415 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ +D A+ + +L + + A +L Sbjct: 86 LERVLAAGGDPAKVVFSGVGKSRDDMRRALQVGVHCFNVESSEELERLQRVAAELGVKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + E + V G+ H + Sbjct: 146 VSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEAIYARAAELDHLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 F L+ + I + LGGG+ +D D+ + ++E Sbjct: 206 QLAPFLDALERLLGLVDRLAARGIAIRHLDLGGGLGVRYRDEQPPLAGDYIRAIRERLHG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQE---SAT 280 + + EPG +IV N L T V + K+ IVD+++ + L A Sbjct: 266 RDLTLVFEPGRSIVANAGVLLTRVEYLKHTGHKDFAIVDAAMNDLIRPALYQAWMDVQAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDAAPRRYDLVGPICETGDFLAKDRELA-LAEGDLLAIRSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + + R + + Y Sbjct: 385 AEVLVDGERAHEVRRRETVPELYA 408 >gi|313114514|ref|ZP_07800028.1| putative carboxynorspermidine decarboxylase [Faecalibacterium cf. prausnitzii KLE1255] gi|310623137|gb|EFQ06578.1| putative carboxynorspermidine decarboxylase [Faecalibacterium cf. prausnitzii KLE1255] Length = 405 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 129/378 (34%), Positives = 196/378 (51%), Gaps = 14/378 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP YL+D+ +L N + L +++ G K+LLA K F+ + ++ L Y+ GT +S LY Sbjct: 24 LPTPCYLLDEGQLRRNGELLLGVQQRTGCKILLAQKAFSNFNVYPVLAPYLAGTEASGLY 83 Query: 62 EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E LG E+ E H + AY+ E +L D I+FN+ SQL KF A+ K +GL Sbjct: 84 ESRLGKEELPEKENHVFCAAYRADEFAELLQYADHIVFNSPSQLAKFGPAAKAAGKSVGL 143 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFL 173 R+NP S + DP P SRLG + + ++GL FH CE + Sbjct: 144 RLNPECSTQEGHAIYDPCAPGSRLGTTRAQWDAAVQADPALPELLDGLHFHTLCEQDA-D 202 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + L +E +FG + +++W++ GGG H T Y + Q + E +KY VQ+YLEP Sbjct: 203 ALALTLAAVEAKFGGLLPRMKWLNFGGGHHITRPGYRLATLEQCITETQKKYGVQVYLEP 262 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY----PNTGPY 288 GEA N L TTVLD +N + + + D S H PD + + P PY Sbjct: 263 GEAWALNAGYLVTTVLDTLQNGETSLAILDMSAACHTPDVIEMPYRPPLLDAGDPGEKPY 322 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 + G +CLAGD+ G++ F P+ G R+ F D+A Y + N FNG+ +P I + + Sbjct: 323 LIRLGGPTCLAGDVVGDYSFASPLTEGQRLIFGDMAIYTTCKNNTFNGMPLPPIWAMDEN 382 Query: 349 GTIKAIREFSYNDYYNNL 366 GT + + +F Y+D+ L Sbjct: 383 GTCRELVKFGYSDFKMRL 400 >gi|218885457|ref|YP_002434778.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756411|gb|ACL07310.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 416 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 113/384 (29%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + G ++K + + L G S E Sbjct: 26 GTPLYVYSAATLRRHFQAFDSAFTGVGHLTCYSVKANSNVHLLRLLADMGAGMDIVSGGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + G+ Y+ K + D +V +L + A ++ + + Sbjct: 86 LHRALAAGVPGQRIVYSGVGKQDDEIRAALEADILLFNVESVQELERINAVAGQMGRTAR 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 IG+RINP V ++ G + + + G+ H + Sbjct: 146 IGVRINPDVDPKTHPYISTGMRNNKFGLDMEQALAAYLLARDLPNVQPVGIDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + F L + + I + LGGG+ T + F + + E Sbjct: 206 TLAPFLEALDRVLDFHERLRDLGLAITHLDLGGGLGITYGEETPPHPREFGEAVSERLRG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES---AT 280 + + LEPG I N L V+ I+ D+++ V L Sbjct: 266 RGLSLILEPGRVIAGNAGILVGRVIYTKSTPSKNFIIADAAMNDLVRPSLYQSYHRIAEV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 TA V G C +GD ++ G+ ++ Y + + +N Sbjct: 326 QPAGRDEITADVVGPICESGDFLARDRILPDMQQGELLAVFSAGAYGFSMSSNYNSRPRA 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + + D Sbjct: 386 AEVLVDGATARCIRKRETLADLVA 409 >gi|239906765|ref|YP_002953506.1| diaminopimelate decarboxylase [Desulfovibrio magneticus RS-1] gi|239796631|dbj|BAH75620.1| diaminopimelate decarboxylase [Desulfovibrio magneticus RS-1] Length = 412 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 111/384 (28%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + ++K + + TL G S E Sbjct: 26 GTPLYVYSAATLRRHFRAFDSAFAALPHLTCYSVKANSNLSVLKTLAAMGAGMDIVSGGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + + Y+ K + +L + A +L + Sbjct: 86 LYRALAAGVDPQKIVYSGVGKRASEIEEALKAGILMFNVESTGELERLSAIASRLGKTAQ 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170 + LRINP+V ++ G + + K + G+ H + Sbjct: 146 VSLRINPNVDPKTHPYISTGLKKNKFGLDIDHSLAAYAKAMELPGVTPVGIDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEK 224 S F L + + ++ LGGG+ + + L + Sbjct: 206 SISPFLEALDKILAFRDKLTAMGIETRYLDLGGGLGIQYNEEEPPHPSEFGQALTKALGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283 + + LEPG IV N L T + + I+ D+++ + L A Sbjct: 266 LPITLILEPGRVIVGNAGILVTEAVYTKKTPSKDFIIVDAAMNDLIRPSLYDSYHAIREV 325 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 V G C +GD V G+ ++ Y + +N Sbjct: 326 RPAGRPELSVDVVGPICESGDFLARDRALPAVAPGEHLAVFSAGAYGFTMSSNYNSRPRA 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D I A R SY+D Sbjct: 386 AEILVDGDEVIVARRRESYDDLIA 409 >gi|218886627|ref|YP_002435948.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757581|gb|ACL08480.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 405 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 123/391 (31%), Positives = 202/391 (51%), Gaps = 27/391 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY----MDGTTSS 58 +P +++D+ ++ N +++ G ++LLALK FA W +F L++ + GT +S Sbjct: 16 PSPCFVVDEARIEANAAILDTVQRRTGARVLLALKGFAMWSLFPLLSRAHGGVLHGTCAS 75 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116 S +E LG E+FGGE HA+ Y D ++ +++ D ++FN+ +Q ++F+ A Sbjct: 76 SPHEARLGREEFGGEVHAFAAGYSDADMAELVTLADHLVFNSFAQWSRFRPAVAAAGRPI 135 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI----------ESEIKNVNGLMFHNN 166 + G+RINP S + +P P SRLG + E + ++GL FH Sbjct: 136 ECGIRINPEHSEGAVAIYNPCSPGSRLGVRPHHFEAALAEAAARGEDALDGISGLHFHTL 195 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 CE L +E FG +++++W++ GGG H T Y + C+ + +KY Sbjct: 196 CEQD-ADALDRTLHAVEARFGAHLSRMKWLNFGGGHHVTRPGYDLDLLCRCIDRMQQKYG 254 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----Y 282 VQ+Y+EPGEA+ N L TVLD+ + + I+D+S AH+PD L Sbjct: 255 VQVYIEPGEAVALNAGVLLCTVLDVVQADMPIAILDTSAAAHMPDVLEMPYRPGCIGSGL 314 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 P +T G+SCLAGD+ GE+ F+ P++ GDR++F D+A Y++ + FNG+ +P I Sbjct: 315 PGERAWTCRFAGKSCLAGDVIGEYSFDAPLQPGDRLAFLDMAIYSMVKTTTFNGLQLPAI 374 Query: 343 AVKNVDGT------IKAIREFSYNDYYNNLS 367 A G + +R F Y + LS Sbjct: 375 ARYRPAGADGRAARREVVRSFGYEAFKYRLS 405 >gi|330976601|gb|EGH76645.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 415 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 121/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + E ++ ++ A+ + +L + ++ A +L+ Sbjct: 86 LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L ++ G + I LGGG+ +D +K E+ + Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + + Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408 >gi|146305308|ref|YP_001185773.1| diaminopimelate decarboxylase [Pseudomonas mendocina ymp] gi|145573509|gb|ABP83041.1| diaminopimelate decarboxylase [Pseudomonas mendocina ymp] Length = 415 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 56/384 (14%), Positives = 115/384 (29%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSSGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + ++ +D A+ + +L + + A + L Sbjct: 86 LERVLAAGGEPSRIVFSGVGKSRDDMRRALEVGVHCFNVESSVELERLQKVAAELGLKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + E V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIDIEQAEAVYARAAELPNLEVVGVDCHIGSQLT 205 Query: 171 SFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 + F L + I+ + LGGG+ +D D+ +++ Sbjct: 206 TLEPFLDALDRLLLLVDRLAARGIHIKHLDLGGGLGVQYRDEQPPLAGDYIAAVRKRLAG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + I+D+++ + L Sbjct: 266 RDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMDVSPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + G C GD + ++ GD ++ Y + +N Sbjct: 326 QPRDGEARHYDLVGPICETGDFLAKDRQLV-LEEGDLLAVRSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + + R + + Y Sbjct: 385 AEVLVDGEQAYEVRRRETVQELYA 408 >gi|323697888|ref|ZP_08109800.1| diaminopimelate decarboxylase [Desulfovibrio sp. ND132] gi|323457820|gb|EGB13685.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans ND132] Length = 412 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 64/384 (16%), Positives = 111/384 (28%), Gaps = 22/384 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ + ++K + + L G S E+ Sbjct: 27 TPLYIYSAATFRRHFHAFDSAFDALDHLTCFSVKANSNLAVLKMLAAEGAGMDIVSGGEL 86 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG- 119 Y+ K ++++L + A ++ Sbjct: 87 YRALQAGVDPSRIVYSGVGKRDSEIREALEARILMFNVESLAELERIDQVAGEMGTTARV 146 Query: 120 -LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENKS 171 RINP V ++ G K E + G+ H + S Sbjct: 147 SFRINPDVDPQTHPYISTGMQKNKFGLDIDMSMQAYKRAAELKHVEPVGMDCHIGSQLTS 206 Query: 172 FLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEKY 225 F L +I+++ LGGG+ + + L + + Sbjct: 207 LDPFLEALDKLLAFNARLKDLGIEIKYLDLGGGLGIPYNEEEPPHPAEFGKALSDKLKGL 266 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES---ATI 281 +++ LEPG I N L T V+ KN +IVD+++ V L Sbjct: 267 PLKVILEPGRVIAGNAGILVTEVVYTKSNPAKNFLIVDAAMNDLVRPSLYGSYHRIAEVE 326 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 P V G C +GD V G+ + Y + + +N Sbjct: 327 PKGRAPKVFDVVGPICESGDFLARDRELPEVMQGELLVVYSAGAYGFSMSSNYNSRPRAC 386 Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365 + + D I A R +Y+D N Sbjct: 387 ELLVDGDKVIVARRRETYDDLLMN 410 >gi|197120414|ref|YP_002140841.1| diaminopimelate decarboxylase [Geobacter bemidjiensis Bem] gi|197089774|gb|ACH41045.1| diaminopimelate decarboxylase [Geobacter bemidjiensis Bem] Length = 417 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 62/385 (16%), Positives = 118/385 (30%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ K L + A + ++K + + T G S Sbjct: 25 VGSPVYIYSKATLERHYKAMDDAFAQAPHTICYSVKANSNLAVLKTFINLGGGVDIVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y+ K + A + +L++ D A ++ KK Sbjct: 85 ELYRALAAGVDPKKVVYSGVGKRDDEIAYALESGILMFNIESEQELDRISDIAGRIGKKA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 G+ R+NP V ++ G + +E + + G+ H + Sbjct: 145 GIAIRVNPDVDPQTHPYITTGLKKAKFGINIERALEQYQRAKGLANIEILGIDCHIGSQL 204 Query: 170 KSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223 F +K +++ I+++ LGGG+ D ++E ++ Sbjct: 205 TKVSPFVDAIKKLKRLLDGVRGMGIDIKYLDLGGGLGIQYDDEAPPLPADYGSSIQEETK 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---A 279 + + EPG +V N L L + KN VIVD+ + L Sbjct: 265 DLGLHLIFEPGRNLVGNAGILVGKCLYTKKGEEKNFVIVDAGMNDLARPSLYGSFHGVRP 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 G + G C +GD + + GD I+F Y + +N Sbjct: 325 VFRNQDGVIEGDIVGPICESGDFLVKEREIPNFRQGDLIAFMSAGAYGFTMSSNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D Sbjct: 385 AAEVMVDGGKFEVVRDREKLEDLVR 409 >gi|28867457|ref|NP_790076.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato str. DC3000] gi|28850691|gb|AAO53771.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato str. DC3000] Length = 415 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAFADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + E ++ ++ A+ + +L + ++ A +L+ Sbjct: 86 LERVLAAGGKAERIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L ++ G + I LGGG+ + +K E+ + Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRHEEPPLAGDYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLGLLFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + + Sbjct: 385 AEVLVDGTQAFEVRRRETVAELFA 408 >gi|282858847|ref|ZP_06267992.1| carboxynorspermidine decarboxylase [Prevotella bivia JCVIHMP010] gi|282588416|gb|EFB93576.1| carboxynorspermidine decarboxylase [Prevotella bivia JCVIHMP010] Length = 388 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 122/375 (32%), Positives = 199/375 (53%), Gaps = 14/375 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++ +L NL + K A V+++LA K +A W F +Y+ TT+SSL E Sbjct: 14 PVYVLEEDRLRKNLSLIANVAKKANVEIILAFKAYALWKTFPIFKEYISATTASSLSEAH 73 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIGLRI 122 LG+E+FG H ++ AY D E + + + FN+++Q +++ KA++ +K +GLR+ Sbjct: 74 LGYEEFGTPCHTFSPAYTDYEFEEIAKYSSHLTFNSLTQYDRYHLKARQYNKALSLGLRV 133 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S +L +P P +R G + E ++V+G H +CE+ S F L +I Sbjct: 134 NPEYSEVGTLLYNPCSPGTRFGILAEKLPEILPEDVDGFHVHCHCESGS-DVFERTLVHI 192 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E++F + Q++WI+ GGG T DY + Q L+ F +Y ++ LEPG A T Sbjct: 193 EEKFAKWFPQLKWINFGGGHLMTRADYDIDKLIQILQHFHSRYPWLKVILEPGSAFGWQT 252 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG---------PYTAM 291 +L + V+DI E + + S AH+PD L T+ P T Sbjct: 253 GSLVSQVVDIVEYRGYRTAILNVSFTAHMPDCLEMPYHPTVRGAETLENGGETTEPTTYR 312 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCL+GD G + F+ ++IG+ I FED+ Y + N FNGI+ P IA+ + + + Sbjct: 313 LGGNSCLSGDWMGNWRFDHKLQIGENIIFEDMLHYTTVKTNTFNGISHPAIALLHSNNEL 372 Query: 352 KAIREFSYNDYYNNL 366 + +RE+SY DY + Sbjct: 373 EMLREYSYEDYRVRM 387 >gi|308051401|ref|YP_003914967.1| diaminopimelate decarboxylase [Ferrimonas balearica DSM 9799] gi|307633591|gb|ADN77893.1| diaminopimelate decarboxylase [Ferrimonas balearica DSM 9799] Length = 414 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 62/382 (16%), Positives = 122/382 (31%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + + A+K + + + L + G S E Sbjct: 26 GTPCYVYSRATIERHFHAFDRAVGDHPHLICYAVKANSNLAVLNLLARLGSGFDIVSGGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKK 117 + ++ K D A+ + + ++L + + A L Sbjct: 86 LARVIQAGGDPGKVVFSGVGKTADEMRQALQAGIYCFNVESEAELERLNEVAGAMGLKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LRINP V ++ G + V G H + Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMARAEQVFQRAASLPNLQVKGADCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 + F L + + + +GGG+ + ++ + L+E Sbjct: 206 TLPPFIDALDRLLALVDRLAELGIVLSHLDVGGGLGVRYDEESPPLPDEYARALREHLGN 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQESATI 281 + + LEPG AI+ N L T V + ++ IVD+++ + L +Q + Sbjct: 266 RPLTLILEPGRAIMANAGVLLTEVAYLKTGEDRHFAIVDAAMNDLIRPSLYSAWQAIIPV 325 Query: 282 YPNTGPY-TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P GP+ T V G C GD G+ ++ GD ++ Y + +N Sbjct: 326 EPRDGPHQTYDVVGPVCETGDFLGKGRELC-IEPGDLLAVRSSGAYGFTMASNYNSRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + D + Sbjct: 385 AEVMVDGDAHHLIRARETVEQL 406 >gi|66043452|ref|YP_233293.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae B728a] gi|63254159|gb|AAY35255.1| Diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae B728a] gi|330970500|gb|EGH70566.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 415 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + E ++ ++ A+ + +L + ++ A +L+ Sbjct: 86 LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L + G + I LGGG+ +D +K E+ + Sbjct: 206 TLEPFIDALDRLLALVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + + Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408 >gi|213970728|ref|ZP_03398853.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato T1] gi|301382616|ref|ZP_07231034.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato Max13] gi|302061756|ref|ZP_07253297.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato K40] gi|302133635|ref|ZP_07259625.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924562|gb|EEB58132.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato T1] gi|331017916|gb|EGH97972.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 415 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 121/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAFADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + E ++ ++ A+ + +L + ++ A +L+ Sbjct: 86 LERVLAAGGKAERIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L ++ G + I LGGG+ +D +K E+ + Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAGDYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLGLLFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + + Sbjct: 385 AEVLVDGTQAFEVRRRETVAELFA 408 >gi|118594281|ref|ZP_01551628.1| diaminopimelate decarboxylase [Methylophilales bacterium HTCC2181] gi|118440059|gb|EAV46686.1| diaminopimelate decarboxylase [Methylophilales bacterium HTCC2181] Length = 415 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 67/384 (17%), Positives = 141/384 (36%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K+ +L++ + K + + A+K + + L + G S E Sbjct: 28 DTPAYVYSKKSILDSYRSFEEAFKTSNHLICFAVKANPNLAILNLLANHGAGFDIVSGGE 87 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + + K + ++ K + + + + +L + + AQK+ K Sbjct: 88 LQRVIAAKGDPKKVVFSGIGKSSKEIELAIHHQILAFNIESEPELYRIQAIAQKMGKIAN 147 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENK 170 + R+NP+V ++ G + IE + G+ H + Sbjct: 148 ISVRVNPNVDAKTHPYISTGLKDNKFGVDEQKAIELYKIANNMDSIAIRGIDCHIGSQIT 207 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 F + + I + +GGGI ++ K + + + EK Sbjct: 208 ELSPFIDSIAKLVGIIDKLKVLGIHIAHLDIGGGIGINYENEKPPNFKAYAEAILPLLEK 267 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++I EPG AI+ L T V + + + KN I+D+++ + L I Sbjct: 268 QNLKIIFEPGRAILGKAGVLLTKVEYVKKGSTKNFAIIDAAMNDLMRPSLYNAYHDIINT 327 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + V G C GD G+ ++ G+ ++ DV Y ++ + +N P Sbjct: 328 SQSSESSAQFDVVGPVCETGDFIGKDRMLS-LEEGNVLAVVDVGAYGMSMSSNYNSRVRP 386 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + I+ + ++ND Sbjct: 387 VELLVDENKIIEIRKRENFNDLIR 410 >gi|330964219|gb|EGH64479.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 415 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAFADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + E ++ ++ A+ + +L + ++ A +L Sbjct: 86 LERVLAAGGKAERIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELDVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L ++ G + I LGGG+ +D +K E+ + Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAGDYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLGLLFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + + Sbjct: 385 AEVLVDGTQAFEVRRRETVAELFA 408 >gi|297570155|ref|YP_003691499.1| diaminopimelate decarboxylase [Desulfurivibrio alkaliphilus AHT2] gi|296926070|gb|ADH86880.1| diaminopimelate decarboxylase [Desulfurivibrio alkaliphilus AHT2] Length = 430 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 59/395 (14%), Positives = 112/395 (28%), Gaps = 32/395 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+YL L + + A+K + + + G S Sbjct: 25 VGTPFYLYSTATLERHFKALDDSFADLAHLTCFAVKACSNIAILRLFARLGGGADIVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ Y+ K A+ + + +L A +L Sbjct: 85 ELYRALAAGIDPGKIVYSGVGKTRAEIRQAIEAGILMFNLESEQELEVVAQCATELQTTA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + R+NP V ++ G + + + G+ H + Sbjct: 145 RISFRVNPDVDPQTHAYISTGLAKNKFGIPIAEAPAVYRRARELAGVEIVGVSCHIGSQL 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223 F + ++K ++++ +GGG+ + +++ Sbjct: 205 TKVSPFVDTIDKLKKFLARLAADGIAVKYLDIGGGLGIKYNQEEPPEPAAYGAAVRQALG 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDI-----------SENIKNLVIVDSSVEAHVPDY 272 + + LEPG IV N + T VL K ++VD+ + Sbjct: 265 ELDCTLILEPGRVIVGNAGIMVTRVLYTKSGPKSSPENSHNGQKKFIVVDAGMNDLFRPS 324 Query: 273 LLYQESATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 L A + G TA V G C GD + G+ ++ + Y Sbjct: 325 LYDAYHAIVPVVQGDGATQTADVVGPICETGDFLARDQEVPAARPGELLAVKSAGAYGFT 384 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + N R SY D Sbjct: 385 MASNYNSRPRVAEVLVNGTEFHVIRRRESYEDLIR 419 >gi|291288389|ref|YP_003505205.1| diaminopimelate decarboxylase [Denitrovibrio acetiphilus DSM 12809] gi|290885549|gb|ADD69249.1| diaminopimelate decarboxylase [Denitrovibrio acetiphilus DSM 12809] Length = 419 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 65/382 (17%), Positives = 116/382 (30%), Gaps = 21/382 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + A+K G+ L G S Sbjct: 25 VGTPFYVYSANGLRKRFREFDNAFEGMDRIVCYAVKACGNIGVLALLGSEGSGADIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHK 116 E+ + K E + D + +++ A Sbjct: 85 ELHRALKAGMDKNKIVFAGVGKTEEEIKFGISSDILMFNAESRQEIDLINKCAGEMNATA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-----NVN--GLMFHNNCEN 169 +I +R+NP V ++ G E I N+ G+ H + Sbjct: 145 RIAIRVNPDVDAKTHPYISTGLKKNKFGIPVDKAKEDYIYASSLPNIEAVGIHCHIGSQL 204 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223 F + K+ I+++ LGGG+ T D K++ + +KE Sbjct: 205 TEISPFRDAAAILVKLIKDLRKNGVNIKYLDLGGGLGITYHDEHAPSHKEYAEAIKEVIR 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESAT-- 280 + EPG I N L T VL E + IVD+++ L Sbjct: 265 DEDFTLVFEPGRNISGNAGALVTKVLYTKETEEKSFKIVDAAMNDLARPSLYNAYHEVQA 324 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + +T + G C + D + VK G + D Y + + +N Sbjct: 325 VDSTEKMFTGDIVGPICESSDFLAKDRNMPNVKRGGLYAVMDTGAYGMTMASNYNSRPRV 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + + R +Y+D Sbjct: 385 PEILVDGENYHIVRRRETYDDL 406 >gi|94499872|ref|ZP_01306408.1| putative diaminopimelate decarboxylase [Oceanobacter sp. RED65] gi|94428073|gb|EAT13047.1| putative diaminopimelate decarboxylase [Oceanobacter sp. RED65] Length = 417 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 63/382 (16%), Positives = 123/382 (32%), Gaps = 24/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ ++ + KN + A+K + + + L + G S+ E Sbjct: 27 GSPLYIYSRKAFSEHYLEYANAFKNEDALICYAVKANSNIAVLNVLAKLGAGFDIVSVGE 86 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ D A+ + S+L + A+++ Sbjct: 87 LERVLKAGGDPSKIVFSGVAKTADEMRRALAVGVHCFNVESESELERLNAVAEEMGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + + G+ H + Sbjct: 147 LSLRVNPDVDAQTHPYISTGLKENKFGVDIDTAKQVYAKAKGMQGIEIKGVDCHIGSQLT 206 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 F L + E ++E I LGGG+ T D ++F + Sbjct: 207 QLEPFMDALDRVLVLVDELKEQAIELEHIDLGGGLGVTYDDEVPPTPQEFADAVLPKLAG 266 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++++ LEPG +I N T V + K+ I+D + + L + Sbjct: 267 RNLKLVLEPGRSIAANAGIFVTQVEFLKSNGDKHFAIIDGGMNDLIRPSLYSAWQRIVEV 326 Query: 284 NTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T V G C GD G+ + GD ++ + Y + +N N Sbjct: 327 QPREKTPKQNYDVVGPVCETGDFLGKDRELAIL-PGDLLAVKSAGAYGFVMASNYNTRNK 385 Query: 340 PTIAVKNVDGTIKAIREFSYND 361 P + + D + R + +D Sbjct: 386 PAEVMVDGDQSHLIRRRETISD 407 >gi|152997590|ref|YP_001342425.1| diaminopimelate decarboxylase [Marinomonas sp. MWYL1] gi|150838514|gb|ABR72490.1| diaminopimelate decarboxylase [Marinomonas sp. MWYL1] Length = 417 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 62/382 (16%), Positives = 118/382 (30%), Gaps = 25/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S+ E Sbjct: 26 GTPCYVYSRATLERHYKAYADAFASHPTLICYAVKACSNIAILNVLARLGSGFDIVSVGE 85 Query: 63 VMLGH-EKFGGETHAYN--VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ + A+ + ++L + A ++ K Sbjct: 86 LERVLKAGGEPSKVMFSGLGKQAEEMRRALEVGIHCFNVESEAELYRLDKVAGEMGKLAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G KD + NV G+ H + Sbjct: 146 VSLRVNPDVDAKTHPYISTGLKENKFGIDIKDAVRIYKIAHELPNLNVMGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 F + E I+ + LGGG+ +D + K EK Sbjct: 206 ELKPFLDTFDRLIGLVDELAEVGITIKHLDLGGGLGVRYRDEVPPEPADYAKLLLEKVKG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281 + ++ EPG +I N L T V + N I+D ++ + L + Sbjct: 266 RNFELAFEPGRSIAANAGILLTQVEFLKCNPHKNFAIIDGAMNDLIRPSLYGAWMNIVPV 325 Query: 282 ---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 G + G C GD G+ ++ GD ++ Y + +N N Sbjct: 326 SLLPTAEGKRNYDLVGPICETGDFLGKDREL-DIQAGDLLAVRSAGAYGFTMSSNYNSRN 384 Query: 339 MPTIAVKNVDGTIKAIREFSYN 360 + + D T + Sbjct: 385 RAAEVMVDGDKTYLIRARETIE 406 >gi|315639212|ref|ZP_07894374.1| carboxynorspermidine decarboxylase [Campylobacter upsaliensis JV21] gi|315480538|gb|EFU71180.1| carboxynorspermidine decarboxylase [Campylobacter upsaliensis JV21] Length = 382 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 135/379 (35%), Positives = 212/379 (55%), Gaps = 18/379 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLAKVSEKSGAKVLLALKGFAFSGAMKIVGEYLHGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H ++ A+KD E D + I+FN++ Q + FK+KA K +GLR Sbjct: 66 EAKFAKEFMDKEIHTFSPAFKDEEFDEIAELSHHIVFNSLHQFHHFKEKA--KAKSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 NP S + L +P +SRLG KD +++ V+GL FH CE +S A+LK Sbjct: 124 CNPEYSLAPKELYNPCGRYSRLGILSKDLENADLSGVSGLHFHALCE-ESAEALEAVLKA 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E +FG ++TQ++W++ GGG H T K Y V+ K+FS+K+ VQ+YLEPGEA+ T Sbjct: 183 FEAKFGKWLTQMKWVNFGGGHHITKKGYDVEKLITLCKKFSDKFGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + G Sbjct: 243 GVLVASVIDIVENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARVLSTREGEQISSLREG 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ G +CLAGD+ GE+ F+ ++ GD+I F D Y+I + FNG+ +P + + Sbjct: 303 EKAYLLAGNTCLAGDVMGEYAFKNALQRGDKIVFLDQIHYSIVKNTTFNGVILPNLMLYT 362 Query: 347 VDGTIKAIREFSYNDYYNN 365 + ++ +R+FSY DY Sbjct: 363 KEKKLEIVRKFSYEDYAKR 381 >gi|327401963|ref|YP_004342802.1| diaminopimelate decarboxylase [Archaeoglobus veneficus SNP6] gi|327317471|gb|AEA48087.1| diaminopimelate decarboxylase [Archaeoglobus veneficus SNP6] Length = 427 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 74/391 (18%), Positives = 135/391 (34%), Gaps = 29/391 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ + +L N+ + +LL A+K + +++ G S Sbjct: 29 LGSPLYVTSRGRLEENMKAYMQAF--PDARLLYAVKANNNLSIMKIISRAGFGADVFSDG 86 Query: 62 EVMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKK 117 E+ L F E +N + EI + +++ +L+ + K Sbjct: 87 ELYLALLAGFKPEKILFNGNSKSEEEIRMGVRAGTYFSVDSIDELHVLSEVAVEEGEEVK 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170 I RINP +S S+ G ++ + V G+ H + Sbjct: 147 IAFRINPDISPETHPKISTGLRTSKFGIPWEEVANAYRLAVEMPGIVPAGIHCHIGSQIL 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSE 223 F L ++ + +E++ LGGG+ + P + L F E Sbjct: 207 DISPFVEALNRLFDVAEVLEDMGIDVEFLDLGGGLGIDYEGKGSPTPADFAAKILPVFEE 266 Query: 224 KY-----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + + +++LEPG +I+ NTT L T V + + KN V VD+ + + Sbjct: 267 RKERLNSNPELWLEPGRSIIGNTTILLTKVNAVKKAYKNFVAVDAGFNLLMRPAMYNAYH 326 Query: 279 ----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 A + G C +GD+ E V+ GD I+ D Y + + + Sbjct: 327 RVAIANKMDREEEEVYTIVGPICESGDVLAEDRKLPRVERGDIIAIFDAGAYGFSMSSQY 386 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 NG + + SY D Sbjct: 387 NGRRRCAEVLVEGNKYYVIRERESYTDLVGK 417 >gi|167036274|ref|YP_001671505.1| diaminopimelate decarboxylase [Pseudomonas putida GB-1] gi|166862762|gb|ABZ01170.1| diaminopimelate decarboxylase [Pseudomonas putida GB-1] Length = 415 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 118/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85 Query: 63 VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G + ++ ++ A+ + +L + + A ++ K Sbjct: 86 LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEMGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---K 224 + F L + + + LGGG+ +D +K E + Sbjct: 206 TVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGVGVRYRDEQPPLVADYIKAIRERVGE 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + I+D+++ + L A Sbjct: 266 RDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMGVSAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD G+ + GD ++ Y + +N Sbjct: 326 KPRAGEGRAYDLVGPICETGDFLGKDRVL-NLAEGDLLAVASAGAYGFVMSSNYNTRGRC 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + R + + Y Sbjct: 385 AEILVDGDQAFEVRRRETIAELYA 408 >gi|254464493|ref|ZP_05077904.1| diaminopimelate decarboxylase [Rhodobacterales bacterium Y4I] gi|206685401|gb|EDZ45883.1| diaminopimelate decarboxylase [Rhodobacterales bacterium Y4I] Length = 421 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 63/390 (16%), Positives = 121/390 (31%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ LL + + + A+K + + TL Q G S Sbjct: 25 VGTPFYVYSTATLLRHFRLFDEALEGTDHLVCFAMKAASNQAILKTLAQAGAGMDVVSQG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E + G+ ++ K E A+ + ++ A++L Sbjct: 85 EYLRARAAGVPGDRIVFSGVGKTAEEIRVALTGGIRQFNVESEPEMEVISAVAEELGAKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 I +R+NP V + ++ G E + V G+ H + Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYARAAALPGLEVVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + I + LGGG+ + ++ +KE Sbjct: 205 TDLEPFRLAYQKVAELTETLRADGHDIRRLDLGGGLGIPYERSNSAPPLPVEYGAMVKET 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 +I +EPG I N L + V+ + ++ D+++ + + Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGQLVSKVIYVKSGEGRDFVILDAAMNDLIRPAMYEAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + G C GD F + P+ GD +SF Y + +N Sbjct: 325 IPVQEPEAGTESRPYDIVGPVCETGDTFAKQRDLPPLAAGDLVSFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D R Y + N Sbjct: 385 SRPLIPEVLVHGDQFAVIRRRPDYEEMINR 414 >gi|148643431|ref|YP_001273944.1| diaminopimelate decarboxylase, LysA [Methanobrevibacter smithii ATCC 35061] gi|222445673|ref|ZP_03608188.1| hypothetical protein METSMIALI_01314 [Methanobrevibacter smithii DSM 2375] gi|148552448|gb|ABQ87576.1| diaminopimelate decarboxylase, LysA [Methanobrevibacter smithii ATCC 35061] gi|222435238|gb|EEE42403.1| hypothetical protein METSMIALI_01314 [Methanobrevibacter smithii DSM 2375] Length = 427 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 64/392 (16%), Positives = 123/392 (31%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID+ ++ +N + ++ A K + L + S Sbjct: 28 GTPTYVIDENRIRDNYNRFYNAFSKYYPDFRVYYACKANTNLAVMRILESEGCCIDAVSP 87 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 EV + F GE + E ++ + ++VS L + + KI Sbjct: 88 GEVYTSKKLGFPGERILFTGNNVTTEELKFVAEQGAVLNLDSVSALKRLAEVVDPEGFKI 147 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSF 172 R+NP V S+ G + +E G+ H Sbjct: 148 SFRVNPMVGAGHHDHCITGGVMSKFGIMDNEAVEVYQFAEDLGFTPVGMHSHIGSGILDP 207 Query: 173 LCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------KDFCQRLKE 220 F +++ G E++ GGG+ K+ K Sbjct: 208 EPFKLAIESTIDIAGKVHTEAGIDFEFVDFGGGVGIPYTPEENIVDIDTFAKENIALFKS 267 Query: 221 FSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 E++ +YLEPG +V + + L T V + ++ + + VDS + + Sbjct: 268 KLEEHDLGKPTMYLEPGRYLVGDASVLLTRVNSVKQSYRKFLGVDSGFHTLLRPAMYDSY 327 Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + N + G C +GD+F V+ GD ++ + Y + Sbjct: 328 HHIVLANKMDAPNTQEVDIAGNVCESGDLFARDRPMPDVEEGDLLAILNAGAYGFTMSSN 387 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 +N + + ++ D +N Sbjct: 388 YNSRPKASEVLVKDGECFLTRERETFEDLFNK 419 >gi|192360548|ref|YP_001983745.1| diaminopimelate decarboxylase [Cellvibrio japonicus Ueda107] gi|190686713|gb|ACE84391.1| diaminopimelate decarboxylase [Cellvibrio japonicus Ueda107] Length = 415 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A+K + + + L + G S E Sbjct: 26 GTPCYVYSRAAFTQQYLSYAQALGSHPGMICYAIKANSNLAILNMLAKLGAGFDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ + ++L A K Sbjct: 86 LERVLYAGGNPSRIVFSGVGKSVQEMARALDVGIFCFNVESEAELELLAQVAADKGKVAN 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V + ++ G + + + GL H + Sbjct: 146 VSLRVNPDVDANTHPYISTGLKENKFGIAIERAPAVYARAAQLPSLAIKGLDCHIGSQLT 205 Query: 171 S---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224 FL L + E I + LGGG+ T +D + +K Sbjct: 206 QLTPFLDALERLLLLIDELAAKGIHISHLDLGGGLGVTYRDETPPPVAEYMAAIKAKLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SAT 280 + + EPG +I N L T V+ + ++D+++ ++ L Sbjct: 266 RPLALMFEPGRSISANAGVLLTQVMFLKPTEHKNFAVIDAAMNDNIRPSLYQAWQDIRPL 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P T + G C GD G+ ++ GD ++ Y + + +N Sbjct: 326 QQRGQAPKTWDLVGPICETGDFLGKGRELA-IEPGDLLAVMSAGAYGFSMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 V + D ++ D Sbjct: 385 AEVVVDGDQMHLVRARETFEDLIR 408 >gi|220919297|ref|YP_002494601.1| diaminopimelate decarboxylase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957151|gb|ACL67535.1| diaminopimelate decarboxylase [Anaeromyxobacter dehalogenans 2CP-1] Length = 427 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 68/387 (17%), Positives = 127/387 (32%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + + A+K + + + G S E Sbjct: 26 GTPLYVYSTATLTRHWKVLHRSLAGLDHLVCYAVKANSNLAVLSLFARLGSGFDIVSGGE 85 Query: 63 VMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--HKK 117 + + G+ V +D E+ L + + + +L + A+++ Sbjct: 86 LYRVLKAGGHPGKVVFSGVGKRDDEVAFALESGVKVLNVESAPELARISIVARRMGLRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + + V G+ H + Sbjct: 146 VALRVNPDVDPKTHPYISTGLSENKFGVSVDEARRLYALAAQDPALEVRGVACHIGSQIT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + F + + K+ G ++ + +GGG+ T D + + +K+ + Sbjct: 206 TVRPFLDAIARVLSLVKDLGKQGIRLGHVDVGGGLGITYADEEPPHPDEYGRAIKKALSR 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + ++ LEPG +V N L T VL + E+ K V+VD+++ V Y I P Sbjct: 266 FDGEVMLEPGRVLVGNAGVLVTRVLHVKESGRKVFVVVDAAMNDLVRPS-YYDAHHEIEP 324 Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 P V G C + D GD + Y + +N Sbjct: 325 AGAPRKDAEEIVCDVVGPICESSDFLARKRRMPRPVRGDLLVVRSAGAYGFAMSSNYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + DG A R +Y D Sbjct: 385 PRAAEVLVDGDGARLARRRETYADLVR 411 >gi|330501238|ref|YP_004378107.1| diaminopimelate decarboxylase [Pseudomonas mendocina NK-01] gi|328915524|gb|AEB56355.1| diaminopimelate decarboxylase [Pseudomonas mendocina NK-01] Length = 415 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 116/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEWQYRAYADALAGMPHLVCFAVKANSNIGVLNVLARLGAGFDIVSSGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ +D A+ + +L + + A +L Sbjct: 86 LERVLAAGGEPSRIVFSGVGKSRDDMRRALEVGVHCFNVESSVELERLQKVAAELGVKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + E +V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIDIEQAEAVYARAAELPNLDVIGVDCHIGSQLT 205 Query: 171 SFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 + F L + + I+ + LGGG+ +D D+ +++ Sbjct: 206 TLEPFLDALDRLLLLVDKLAERGITIKHLDLGGGLGVQYRDEQPPLAGDYIAAVRKRLAG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L Sbjct: 266 RDLSLVFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVSPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD + ++ GD ++ Y + +N Sbjct: 326 QPREGEARNYDLVGPICETGDFLAKDRQLV-LEEGDLLAVRSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + + R + + Y Sbjct: 385 AEVMVDGEQAFEVRRRETVQELYA 408 >gi|325300615|ref|YP_004260532.1| carboxynorspermidine decarboxylase [Bacteroides salanitronis DSM 18170] gi|324320168|gb|ADY38059.1| carboxynorspermidine decarboxylase [Bacteroides salanitronis DSM 18170] Length = 387 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 122/381 (32%), Positives = 190/381 (49%), Gaps = 17/381 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++++ L NL + + AGV+++LA K FA W F +Y+ TT+SS+Y Sbjct: 7 VPSPCYVMEEDLLRKNLSLIKSVAERAGVEIILAFKAFALWKSFPIFREYIRHTTASSVY 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E L E+FG + H Y+ AY D L I FN++SQ +F K A G Sbjct: 67 EARLAFEEFGSKAHTYSPAYTDGNFADFLKYSSHITFNSLSQYGRFYPKVKASSEPVSCG 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RINP S + L +P P +R G + + + G H +CE+ S+ L Sbjct: 127 IRINPEYSEVEVELYNPCAPGTRFGVTADLLPDRLPEGIEGFHCHCHCESSSYE-LERTL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 K+IE++F + Q++W++LGGG T KDY V+ L+ +Y QI LEPG A Sbjct: 186 KHIEEKFACWFPQLKWLNLGGGHLMTRKDYDVEHLIGLLQGLKVRYPHLQIILEPGSAFA 245 Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG----------- 286 T L +V+D+ E+ V D S H+PD L + Sbjct: 246 WQTGPLVASVVDVVESRGIRTAVLDVSFTCHMPDCLEMPYQPAVRGAESLPAEAVKTARP 305 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + + G SCL+GD G + F +++G+RI FED+ Y + + N FNGI+ P+IA+ Sbjct: 306 DEHVYRLGGNSCLSGDYMGSWKFGHALQVGERIVFEDMIHYTMVKTNMFNGIHHPSIALC 365 Query: 346 NVDGTIKAIREFSYNDYYNNL 366 + +G ++ R F Y DY + + Sbjct: 366 HSNGELEVYRTFHYEDYRDRM 386 >gi|116053426|ref|YP_793751.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa UCBPP-PA14] gi|254238026|ref|ZP_04931349.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa C3719] gi|296392135|ref|ZP_06881610.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PAb1] gi|313106693|ref|ZP_07792911.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa 39016] gi|115588647|gb|ABJ14662.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa UCBPP-PA14] gi|126169957|gb|EAZ55468.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa C3719] gi|310879413|gb|EFQ38007.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa 39016] Length = 415 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ +D A+ + +L + + A +L Sbjct: 86 LERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCFNVESGEELERLQRVAAELGVKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + E + V G+ H + Sbjct: 146 VSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEAVYARAAELDHLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 F L+ + I + LGGG+ +D D+ + ++E Sbjct: 206 QLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGLGVRYRDEQPPLAGDYIRAIRERLHG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SAT 280 + + EPG +IV N L T V + IVD+++ + L A Sbjct: 266 RDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVQAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDAVPRRYDLVGPICETGDFLAKDRDLA-LAEGDLLAVRSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + T + R + + Y Sbjct: 385 AEVLVDGEQTHEVRRRETVQELYA 408 >gi|330878499|gb|EGH12648.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 415 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 121/383 (31%), Gaps = 23/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAFADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + E ++ ++ A+ + +L + ++ A +L+ Sbjct: 86 LERVLAAGGKAERIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L ++ G + I LGGG+ +D +K E+ + Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEVPPLAGDYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 RDLGLLFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYY 363 + + + R + + + Sbjct: 385 AEVLVDGTQAFEVRRRETVAELF 407 >gi|2499347|sp|O05321|DCDA_PSEFL RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|1929094|emb|CAA72943.1| LysA protein [Pseudomonas fluorescens] Length = 416 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 120/385 (31%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + T + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRTFADALEGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQ-LNKFKDKAQKL--HK 116 + + ++ ++ A+ + + ++ + A +L Sbjct: 86 LERVLAAGGSADKIVFSGVGKTREDMRRALEVGVHCFNIESTDELGSRLQIVAAELGVRA 145 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN 169 I LR+NP V ++ G D + V G+ H + Sbjct: 146 PISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYVRAAQLPNLEVLGVDCHIGSQL 205 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + F L + G + I LGGG+ +D +K E+ Sbjct: 206 TTLEPFIDALDRLLALVDRLGDCGIYLRHIDLGGGVGVRYRDEEPPLVADYIKAVRERLD 265 Query: 227 VQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 + + EPG IV N L T V + IVD+++ + L A Sbjct: 266 GRDLALMFEPGRYIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTA 325 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 +T + + G C GD + ++ GD ++ Y + +N Sbjct: 326 VRPRDTAARSYDIVGPICETGDFLAKGRELA-LEEGDLLAVHSAGAYGFVMSSNYNTRGR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + R + + + Sbjct: 385 CAEVLVDGDQAFEVRRRETVAELFA 409 >gi|307546848|ref|YP_003899327.1| diaminopimelate decarboxylase [Halomonas elongata DSM 2581] gi|307218872|emb|CBV44142.1| diaminopimelate decarboxylase [Halomonas elongata DSM 2581] Length = 429 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 69/387 (17%), Positives = 121/387 (31%), Gaps = 28/387 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L + + A+K A + L + G S+ E Sbjct: 26 GTPCYVYSKATLARHFRAYTEALGGHPHLICYAVKANANLAVLGLLARLGAGFDIVSVGE 85 Query: 63 VMLGH-EKFGGETHAYNV-AYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ A ++ E+ A+ + ++L + A+ L K Sbjct: 86 LERVLVAGGDPAKVVFSGVAKQENEMARALEVGIKCFNVESRAELERLDAVARGLGKVAS 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + + V GL H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKDNKFGIPVDEAFEVYRQAAGMDNVRVAGLDCHIGSQLT 205 Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR-------LKE 220 FL L + ++ ++E + LGGG+ +D L Sbjct: 206 ELSPFLDALDRLLALLEQLRDAGIEVEHLDLGGGLGVPYQDENPPQPFDYATSLLERLSR 265 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 + + + EPG +I N L T V + KN IVD+++ + L A Sbjct: 266 WPGSERLTLLFEPGRSIAANAGVLLTRVEFLKPGETKNFAIVDAAMNDLIRPALYQAWQA 325 Query: 280 TI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + T V G C GD G+ + GD ++ Y + +N Sbjct: 326 ILPVDTRQPRETDTYDVVGPVCETGDFLGKQRRLA-IAAGDLLAVRSAGAYGFVMASNYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDY 362 P + + D R D Sbjct: 385 SRPRPPEVMVDGDRMHLVRRRERLEDL 411 >gi|256829250|ref|YP_003157978.1| diaminopimelate decarboxylase [Desulfomicrobium baculatum DSM 4028] gi|256578426|gb|ACU89562.1| diaminopimelate decarboxylase [Desulfomicrobium baculatum DSM 4028] Length = 423 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 77/384 (20%), Positives = 121/384 (31%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + ++K + L Q GT S E Sbjct: 26 GTPLYIYSATTLKRHYKAFDSAFDGIDHLTCYSVKANSNLSFLKILAQEGAGTDIVSGGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + + Y+ K D +V +L + D A + K Sbjct: 86 LFRALRAGVDPKKIVYSGVGKKTVEIQEALFADILMFNVESVQELERINDVAGGVDKVAR 145 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-----KNVN--GLMFHNNCENK 170 LRINP V ++ G D +++ NV G+ H + Sbjct: 146 VSLRINPDVDPKTHPYVSTGLKENKFGLSRADALKAYALAQSLPNVEPIGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224 F L+ +++ G +I+++ LGGG+ T + + L E + Sbjct: 206 QLSPFMEALEKLKEFHGQLVQMGIKIKYMDLGGGLGITYNEEAPPHPEELGKALIESLKG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 V + LEPG I NT L T V K VIVD+++ V L Sbjct: 266 LDVTLILEPGRVIAGNTGILVTEVQYTKTNEDKTFVIVDAAMNDLVRPSLYGSYHRIASV 325 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 G TA V G C +GD + V GD ++ Y + +N Sbjct: 326 REGNGEEMTADVVGPICESGDFLAKNRTFPKVAQGDLLAAFSAGAYGFVMSSQYNSRARA 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + D + + YND Sbjct: 386 AEIMVEGDKHVLVRKREVYNDLVA 409 >gi|303325938|ref|ZP_07356381.1| carboxynorspermidine decarboxylase [Desulfovibrio sp. 3_1_syn3] gi|302863854|gb|EFL86785.1| carboxynorspermidine decarboxylase [Desulfovibrio sp. 3_1_syn3] Length = 407 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 124/395 (31%), Positives = 205/395 (51%), Gaps = 30/395 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTS 57 + +P +++D+ +L N +++ G K+LLALK +AAW F L++ G + Sbjct: 14 VPSPCFVLDEARLAANAAILDEVQRRTGAKILLALKGYAAWATFPLLSRTGVGPLWGVCA 73 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 SS+ E LG E+FGGE HA+ A+ + EI +L D I+FN+ +Q +F+ + ++ Sbjct: 74 SSVDEARLGREEFGGEVHAFAAAWTEAEIAELLDLADHIVFNSPTQWRQFRPVIEAHNRA 133 Query: 117 -------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169 + GLR+NP S + DP P SRLG + + ++++ ++GL FH CE Sbjct: 134 RRAENPIECGLRLNPEHSEGAVPIYDPCSPGSRLGIRQRHFDPADLEGISGLHFHTLCEQ 193 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + L +E++FG ++ WI++GGG H T Y + C L + ++Y +I Sbjct: 194 G-ADALARTLDVVEEKFGPYLPACRWINMGGGHHITKPGYDLDLLCACLTRWRQRYDARI 252 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----- 284 YLEPGEA+ N L TVLD+ + ++D S H+PD L ++ Sbjct: 253 YLEPGEAVALNAGWLTATVLDVVMADMPVAVLDVSAACHMPDVLEMPYRPEVFYRHEGAT 312 Query: 285 -------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 +T + G+SCLAGD+ GE+ F P++ G R+ F D+A Y++ + FNG+ Sbjct: 313 ARAGAAGEQAWTCRLAGKSCLAGDVIGEYGFAAPLEAGQRLVFGDMAIYSMVKTTTFNGL 372 Query: 338 NMPTIAVKN-----VDGTIKAIREFSYNDYYNNLS 367 +P+I + + + +REF Y D+ N LS Sbjct: 373 RLPSIGICKAGNASGENRFRLLREFGYADFRNRLS 407 >gi|269103729|ref|ZP_06156426.1| diaminopimelate decarboxylase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163627|gb|EEZ42123.1| diaminopimelate decarboxylase [Photobacterium damselae subsp. damselae CIP 102761] Length = 417 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 64/383 (16%), Positives = 119/383 (31%), Gaps = 24/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G SL E Sbjct: 27 GTPLYVYSRATLERHWQAFDRAVASHPHLICYAVKANSNLAVLNVLAKLGSGFDIVSLGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGDPSKVVFSGVGKTVAEMTRALSLGIKCFNVESEPELERLNQVAAELGVIAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167 I LRINP V ++ G + ++ NV G+ H Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFERALDVYRLAHRLPNLNVVGMDCHIGSQLT 206 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 E F+ L ++ I + +GGG+ T P L+ ++ Sbjct: 207 EITPFIDAVDRLLSLIDTLADEGITIAHLDVGGGLGVTYDQEQPPEPSDYAIALLERLNQ 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATI- 281 +++ EPG AI N L T V + KN IVD+++ + L A I Sbjct: 267 YPELELIFEPGRAIAANAGILLTRVEYLKHSEYKNFAIVDAAMNDLIRPTLYSAWQAIIP 326 Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C GD G ++ D ++ Y + +N Sbjct: 327 ASPRQGEMQTYDIVGPICETGDFIGRDRQLA-LEPNDLLAVRSAGAYGFVMASNYNTRAR 385 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 + + + + + + Sbjct: 386 AAEVMVDGEQSYLVRQRETLQQL 408 >gi|114561631|ref|YP_749144.1| diaminopimelate decarboxylase [Shewanella frigidimarina NCIMB 400] gi|114332924|gb|ABI70306.1| diaminopimelate decarboxylase [Shewanella frigidimarina NCIMB 400] Length = 414 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 67/382 (17%), Positives = 118/382 (30%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFNNAVADHPHLICYAVKANSNLAVLNVLARLGSGFDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K A+ + ++L + + A +L K Sbjct: 86 LSRVLQAGGDPKKVVFSGVGKTVAEMEQALNIGIYCFNVESSAELEQLNEVASRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167 + LRINP V ++ G ++ E +V G+ H Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEVVFARAAELAHLHVKGVDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 E K FL + + G QIE +GGG+ T + L E Sbjct: 206 EIKPFLDAMDRMLALIDRLGEQGIQIEHFDVGGGLGVTYNSETPPHPDAYAAALLERLNG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ EPG AI N T VL + + K IVD ++ + L I Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPSLYSAWQNIIPV 325 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD G+ VK GD ++ Y + +N Sbjct: 326 QQNDAPTFAYDIVGPVCETGDFLGKDRQLA-VKSGDLLAIRSSGAYGFAMASNYNSRPRV 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + + + Sbjct: 385 AEIMVDGGNDFVVRQRETLEQL 406 >gi|49088246|gb|AAT51548.1| PA5277 [synthetic construct] Length = 416 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ +D A+ + +L + + A +L Sbjct: 86 LERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCFDVESGEELERLQRVAAELGVKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + E + V G+ H + Sbjct: 146 VSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEAVYARAAELDHLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 F L+ + I + LGGG+ +D D+ + ++E Sbjct: 206 QLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGLGVRYRDEQPPLAGDYIRAIRERLHG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SAT 280 + + EPG +IV N L T V + IVD+++ + L A Sbjct: 266 RDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVQAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + P + G C GD + + GD ++ Y + +N Sbjct: 326 RPRDAAPRRYDLVGPICETGDFLAKDRDLA-LAEGDLLAVRSAGAYGFVMSSNYNTRGRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + T + R + + Y Sbjct: 385 AEVLVDGEQTHEVRRRETVQELYA 408 >gi|148925677|ref|ZP_01809365.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni CG8486] gi|145845687|gb|EDK22778.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni CG8486] Length = 382 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 138/376 (36%), Positives = 212/376 (56%), Gaps = 18/376 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EI + S I+FN+++Q +KF+ A+ +GLR Sbjct: 66 EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S A+LK Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKA 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG +I Q++W++ GGG H T K Y V+ K FS+KY VQ+YLEPGEA+ T Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKES 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D Y I + FNGI +P + + + Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLD 362 Query: 347 VDGTIKAIREFSYNDY 362 ++ IREFSY DY Sbjct: 363 RKNELQMIREFSYKDY 378 >gi|304382240|ref|ZP_07364747.1| carboxynorspermidine decarboxylase [Prevotella marshii DSM 16973] gi|304336597|gb|EFM02826.1| carboxynorspermidine decarboxylase [Prevotella marshii DSM 16973] Length = 391 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 120/381 (31%), Positives = 189/381 (49%), Gaps = 17/381 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++++++L NL + K A V+++LA K FA W F Y+DGTT+SSL Sbjct: 11 VHTPIYILEEERLRTNLQLIARVAKEADVEVILAFKAFALWKTFPIFRAYIDGTTASSLN 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119 E +L + +FG H ++ AY D EI + D + FN++SQ ++ KA +G Sbjct: 71 EALLAYREFGARAHTFSPAYTDDEIGEIARCSDILTFNSLSQYCRYATAAKAAHPDVSLG 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LR+NP S L +P +R G E + G H +CE+ F L Sbjct: 131 LRVNPEYSEVGTALYNPCAEGTRFGVSADKLPEHLPDGIEGFHCHCHCESG-ADVFVRTL 189 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 +IE +F + Q++W++ GGG T +DY V + L+ F +Y + LEPG A Sbjct: 190 AHIETQFSPWFGQLKWMNFGGGHLMTRRDYDVPLLVETLRGFHRRYPHLHVILEPGSAFA 249 Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPYT-------- 289 T L + V+DI E+ + + S H+PD L + Sbjct: 250 WETGVLVSQVVDIVEDHGIKTAILNVSFTCHMPDCLEMPYQPAVRGAETLPPDAAAHCAP 309 Query: 290 ----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + G SCL+GD G + FE+P+ +GD + FED+ Y + + FNGI+ P+IA+ Sbjct: 310 EAPVYRLGGNSCLSGDFMGSWLFERPLSVGDNVIFEDMLHYTTVKTHMFNGISHPSIALL 369 Query: 346 NVDGTIKAIREFSYNDYYNNL 366 + DG ++ +R F+Y DY N + Sbjct: 370 HADGELEMLRVFTYEDYKNRM 390 >gi|261349779|ref|ZP_05975196.1| diaminopimelate decarboxylase [Methanobrevibacter smithii DSM 2374] gi|288860563|gb|EFC92861.1| diaminopimelate decarboxylase [Methanobrevibacter smithii DSM 2374] Length = 427 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 64/392 (16%), Positives = 123/392 (31%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID+ ++ +N + ++ A K + L + S Sbjct: 28 GTPTYVIDENRIRDNYNRFYNAFSKYYPDFRVYYACKANTNLAVMRILESEGCCIDAVSP 87 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 EV + F GE + E ++ + ++VS L + + KI Sbjct: 88 GEVYTSKKLGFPGERILFTGNNVTTEELKFVAEQGAVLNLDSVSALKRLAEVVDPEGFKI 147 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSF 172 R+NP V S+ G + +E G+ H Sbjct: 148 SFRVNPMVGAGHHDHCITGGVMSKFGIMDNEAVEVYQFAEDLGFTPVGMHSHIGSGILDP 207 Query: 173 LCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------KDFCQRLKE 220 F +++ G E++ GGG+ K+ K Sbjct: 208 EPFKLAIESTIDIAGKVHTEAGIDFEFVDFGGGVGIPYTPEENIVDIDTFAKENIALFKS 267 Query: 221 FSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 E++ +YLEPG +V + + L T V + ++ + + VDS + + Sbjct: 268 KLEEHDLGKPTMYLEPGRYLVGDASVLLTRVNSVKQSYRKFLGVDSGFHTLLRPAMYDSY 327 Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + N + G C +GD+F V+ GD ++ + Y + Sbjct: 328 HHIVLANKMDAPNTQEVDIAGNVCESGDLFARDRPMPNVEEGDLLAILNAGAYGFTMSSN 387 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 +N + + ++ D +N Sbjct: 388 YNSRPKASEVLVKDGECFLTRERETFEDLFNK 419 >gi|46580057|ref|YP_010865.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|46449473|gb|AAS96124.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|311233943|gb|ADP86797.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris RCH1] Length = 412 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 67/382 (17%), Positives = 117/382 (30%), Gaps = 22/382 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + A ++K + + L G S E Sbjct: 26 GTPLYVYSAGTLERHYRAFDSAFGKAAHLTCFSVKACSNIHILKLLGSLGAGVDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + G Y+ K + D ++ +L ++ A + Sbjct: 86 LHRALLAGIPGRRIVYSGVGKRPDEIRSALEADILMFNVESLQELRTIEEVAASMGTTAR 145 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-----KNVN--GLMFHNNCENK 170 LRINP V ++ G + +E + +++ G+ H + Sbjct: 146 VSLRINPDVDPHTHPYISTGLQKNKFGIEMTQALEGYMLARDLPHIDPIGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 S F L + I ++ LGGG+ T + + E+ Sbjct: 206 SLSPFLEALDKVLEFREHLSILGLDISYLDLGGGLGITYGEETPPHPRDFGRAVLERTKG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---AT 280 ++ + LEPG I N L T VL K VIVD+++ V L Sbjct: 266 LNLTLVLEPGRVIAGNAGILVTEVLYTKTTPSKQFVIVDAAMNDLVRPSLYASYHRIAEV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + T V G C +GD V+ G+ ++ Y + + +N Sbjct: 326 LPHGRTEQTVDVVGPICESGDFLARDRVLPAVEQGELLAVFSAGAYGFSMSSQYNSRPRA 385 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + D R +Y+D Sbjct: 386 AEVLVRGDTAKSIRRRETYDDL 407 >gi|93006328|ref|YP_580765.1| Orn/DAP/Arg decarboxylase 2 [Psychrobacter cryohalolentis K5] gi|92394006|gb|ABE75281.1| Orn/DAP/Arg decarboxylase 2 [Psychrobacter cryohalolentis K5] Length = 414 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 196/399 (49%), Positives = 254/399 (63%), Gaps = 34/399 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TPYYL+D+ ++ N+ + + +G K LLALKCFA WG+FD + Y+ GTTSSSL E Sbjct: 16 PTPYYLLDEAAIVANMQIIARLCELSGAKALLALKCFATWGVFDIMQPYLHGTTSSSLNE 75 Query: 63 VMLGHEKFGG----------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 V LG+E FG ETHAY+VAY E+ VLS D IIFN++SQLN FKD+A Sbjct: 76 VRLGYETFGKNSNASSKDKKETHAYSVAYSADEMPEVLSYADKIIFNSISQLNVFKDQAA 135 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 + +GLR+NP S S FI+ADP RPFSRLGE KDKI + + +++G+M HNNCEN SF Sbjct: 136 AQNIPVGLRLNPKTSNSSFIIADPARPFSRLGEHDKDKIAAVLSDISGVMIHNNCENDSF 195 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 FS L +IE FG + Q+EW+SLGGGIHF +YP++ RLK FSEKY VQ+YLE Sbjct: 196 EAFSESLADIETRFGDVLQQLEWVSLGGGIHFIAPNYPLEKLADRLKGFSEKYGVQVYLE 255 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----------- 281 PGEA + TL T+VLD N KNL +VDSS+EAH+ D L+Y+ESA I Sbjct: 256 PGEASIHGAGTLVTSVLDTMHNEKNLAVVDSSIEAHMLDLLIYRESAPITAVNSDLINIA 315 Query: 282 -------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 ++ GRSCLAGDIFGE+ +K+GD ++F + AGY + Sbjct: 316 SLDIDPTNIAPISENAKSADNTIIYGRSCLAGDIFGEYALPNKLKVGDTVTFGNAAGYTM 375 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 +KNWFNG+NMP I ++ +DG+I REF Y DY +LS Sbjct: 376 VKKNWFNGVNMPAIVIRRLDGSIDIQREFDYQDYKASLS 414 >gi|333030061|ref|ZP_08458122.1| carboxynorspermidine decarboxylase [Bacteroides coprosuis DSM 18011] gi|332740658|gb|EGJ71140.1| carboxynorspermidine decarboxylase [Bacteroides coprosuis DSM 18011] Length = 377 Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats. Identities = 121/368 (32%), Positives = 179/368 (48%), Gaps = 7/368 (1%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++D+ L NL+ + AG++++LA K FA W F +Y+ +T+SS YE Sbjct: 10 PCYIMDESLLRKNLEKIKGVADTAGIEIILAFKSFALWRTFPIFREYIGHSTASSKYEAR 69 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E FG + H Y+ AY D + ++ D I FN+++Q +F K + GLRINP Sbjct: 70 MALETFGSKAHTYSPAYTDEDFHEIMRCSDHITFNSLTQYERFYRKTLEHDITCGLRINP 129 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L +P P SR G E + + G H CE+ S+ ++ IE+ Sbjct: 130 EYSEVENDLYNPCAPGSRFGVIQSQMPEKLPEGIEGFHCHTLCESNSYDFERTLVY-IER 188 Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTT 243 F + QI+WI+ GGG T KDY + LK F +Y + +EPG A T Sbjct: 189 NFSKWFDQIKWINFGGGHLMTQKDYNREHLIGVLKGFKARYPHLHVIMEPGSAFTWQTGV 248 Query: 244 LNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCL 298 L + V+DI IV+ S H+PD L I GPY + G SCL Sbjct: 249 LTSKVVDIVENKGIKTAIVNVSFTCHMPDTLEMPYQPVITDAKIGNDGPYIYRIGGNSCL 308 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 +GD G + F K +K+GD + FED+ Y + FNGI+ P I + D ++ F+ Sbjct: 309 SGDWMGNWSFNKELKVGDVVVFEDMIHYTTVKTTMFNGIHHPHIGLWTKDNKALVMKHFT 368 Query: 359 YNDYYNNL 366 Y DY N + Sbjct: 369 YGDYLNRM 376 >gi|78486188|ref|YP_392113.1| diaminopimelate decarboxylase [Thiomicrospira crunogena XCL-2] gi|78364474|gb|ABB42439.1| diaminopimelate decarboxylase [Thiomicrospira crunogena XCL-2] Length = 418 Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats. Identities = 60/383 (15%), Positives = 121/383 (31%), Gaps = 24/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ +Q + + A+K + + + L + G S E Sbjct: 29 GTPLYVYSRQAFEDRWREFDQAFGRQPHLVCYAVKTNSNIAILNLLARLGSGFDIVSQGE 88 Query: 63 VMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ A+ + ++L++ + A+KL+K Sbjct: 89 LERVLRAGGDPSKVVFSGVAKKSSEIERALTVGIRCFNVESHAELDRIQAVAKKLNKIAP 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNC--- 167 I +R+NP V ++ G D ++ G+ H Sbjct: 149 ISIRVNPDVDAKTHPYISTGLKDNKFGVDINTAPALYADAQALSHIDIIGIDCHIGSQLT 208 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224 E F+ + ++K I + LGGG+ D + ++ + + Sbjct: 209 EITPFVDALDRVLELKKTLTDQGINIHHLDLGGGLGIQYTDETPPEIADYIQALMKKLDD 268 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT--- 280 S+++ +EPG AI N L T V + I+D+++ + L Sbjct: 269 PSIEVIIEPGRAIAGNAGVLVTEVEYLKPTEHKNFAIIDAAMNDLIRPALYQSHQTIQPV 328 Query: 281 -IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C GD G+ +K GD ++ Y + +N Sbjct: 329 TPRTDGEDVEWDLVGPVCETGDFLGKQRKL-NLKAGDYLAVMSSGAYGFTMSSNYNTRTR 387 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 + + + +YND Sbjct: 388 AAEILVDHKQAYEIRPRETYNDL 410 >gi|82701675|ref|YP_411241.1| diaminopimelate decarboxylase [Nitrosospira multiformis ATCC 25196] gi|82409740|gb|ABB73849.1| diaminopimelate decarboxylase [Nitrosospira multiformis ATCC 25196] Length = 418 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 113/383 (29%), Gaps = 24/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + L + A+K + G+ + L + G S E Sbjct: 29 GTPCYAYSRAALTTAYCEFDDAFAGRDHLVCYAVKANSNLGILNLLARLGSGFDIVSGGE 88 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ A+ + + ++L+ A ++ K Sbjct: 89 LQRVLKAGGDPQKIVFSGVGKQPAEMKAALEAGILCFNVESEAELHGLNRVAGEMGKVAP 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G + V GL H + Sbjct: 149 VSLRVNPDVDAKTHPYISTGLKENKFGIPFDEAEALYASAQALGNVRVAGLDCHIGSQLT 208 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 F K + +IE + LGGG+ ++ + L+ Sbjct: 209 ELAPFIETCKKMLGLLDRLEAQGLEIEHLDLGGGLGIRYAGENPPSAREYVEALRSVVGN 268 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281 +I +EPG ++V N L TTV + IVD+++ + L + Sbjct: 269 RRQKILIEPGRSLVGNAGVLLTTVEYLKPTPHRDFAIVDAAMNDLMRPALYKAYHEILPV 328 Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T V G C GD G + GD ++ Y ++ + +N Sbjct: 329 VARNEMDAKTYQVVGPVCETGDFLGHDRHLA-LAQGDLLAVMSAGAYGMSMSSNYNARPR 387 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 + + D S Sbjct: 388 AAEVMIDGDRIHLIRERESVEQL 410 >gi|297539787|ref|YP_003675556.1| diaminopimelate decarboxylase [Methylotenera sp. 301] gi|297259134|gb|ADI30979.1| diaminopimelate decarboxylase [Methylotenera sp. 301] Length = 416 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 122/385 (31%), Gaps = 25/385 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ K L ++ K+ + A+K + + + + G S E+ Sbjct: 27 TPCYVYSKSALTQAFESFSAGFKDCDHLVCFAVKANPSLAILNLFAKLGAGFDIVSGGEL 86 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--KI 118 + ++ K N D + S+L + D A + K I Sbjct: 87 ARVLAAGGDPKKIVFSGVGKTEAEMQAALNADIFCFNVESASELQRLNDVASFMGKVAPI 146 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKS 171 LR+NP+V ++ G +D ++ ++G+ H + Sbjct: 147 SLRVNPNVDAKTHPYISTGLKNNKFGVAYEDALDIYLQAAKMSNIAIHGVDCHIGSQITE 206 Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEKY 225 F + I+ I GGGI D + F ++ Sbjct: 207 LSPFLDAFDRVLALVDALAENGIVIQHIDAGGGIGICYSDETPPEFTVFATAMRAKLGSR 266 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES-----A 279 +V++ EPG A+V N L T V + IVD+++ + L Sbjct: 267 NVKLVFEPGRALVGNAGVLLTKVEYLKHTESKNFAIVDAAMNDLMRPALYDAYHDIKAVQ 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 +T T + G C +GD G + GD ++ Y ++ + +N Sbjct: 327 PRQDDTEALTYEIVGPVCESGDFLGHDRTLA-LVEGDILAIMSAGAYGMSMSSNYNTRPR 385 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + D + Sbjct: 386 AAEVMVDGDQCHLIRKREQIADLFA 410 >gi|86149312|ref|ZP_01067543.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840094|gb|EAQ57352.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6] Length = 382 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 140/376 (37%), Positives = 213/376 (56%), Gaps = 18/376 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +GVK+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLASVSEKSGVKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EI + S I+FN+++Q +KF+ A+ +GLR Sbjct: 66 EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S A+LK Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNVIEGLHFHALCE-ESADALEAVLKA 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG +I Q++W++ GGG H T K Y V+ K FS+KY VQ+YLEPGEA+ T Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKES 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D Y I + FNGI +P + + N Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLN 362 Query: 347 VDGTIKAIREFSYNDY 362 ++ IREFSY DY Sbjct: 363 AKNELQMIREFSYKDY 378 >gi|11498406|ref|NP_069634.1| diaminopimelate decarboxylase (lysA) [Archaeoglobus fulgidus DSM 4304] gi|8134392|sp|O29458|DCDA_ARCFU RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|2649806|gb|AAB90438.1| diaminopimelate decarboxylase (lysA) [Archaeoglobus fulgidus DSM 4304] Length = 419 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 73/390 (18%), Positives = 130/390 (33%), Gaps = 29/390 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L NL+ N G LL A+K + + + G S E Sbjct: 24 GTPVYVTSRALLERNLEAYKKAFSNEG--LLYAVKANNNLALMRIIASHGFGADVFSDGE 81 Query: 63 VMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKI 118 + L F + +N EI+ ++ +++ +L A++ +I Sbjct: 82 LYLASLAGFRKDMVLFNGNSKSRKEIEMGVTAGVKFSVDSLDELRTISKIAKEVGKEVEI 141 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKS 171 R+NP V S+ G + E+ + G+ H + Sbjct: 142 AFRVNPDVDPKTHPKIATGLRESKFGIPHEMVREAYEMALKLDGVVPVGIHCHIGSQILD 201 Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY--- 225 F + +I + ++ ++ +GGG+ + ++ Sbjct: 202 LSPFVHALNKVMDIAVDIEKLGVELSFVDMGGGLGIDYEGKGAPTPKDLASAILPEFEGR 261 Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES- 278 Q++LEPG +IV NTT L T V + + KN V VD+ + + Sbjct: 262 KADLTSDPQLWLEPGRSIVGNTTVLITRVNAVKKGYKNFVAVDAGFNVLIRPAMYGSYHR 321 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 A V G C +GD+ V++GD I+ D Y + +N Sbjct: 322 VAVANKMDAEPEEVYTVVGPICESGDVLARDRKLPKVEVGDLIAVFDAGAYGFVMSSQYN 381 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 G + + D + SY D Sbjct: 382 GRPRCAEVLVSGDRWDVIREKESYGDLIEK 411 >gi|188996497|ref|YP_001930748.1| diaminopimelate decarboxylase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931564|gb|ACD66194.1| diaminopimelate decarboxylase [Sulfurihydrogenibium sp. YO3AOP1] Length = 419 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 55/380 (14%), Positives = 125/380 (32%), Gaps = 22/380 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+++ K+ +L+ ++ K+ + ALK + + + G S Sbjct: 29 VGTPFFVYSKKAILDKINQYKEAFKDYDTLICYALKANSNLSLLKIFEENGVGADIVSGG 88 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ F Y K A+ N + + +L+ + A Q+ Sbjct: 89 ELYKAKKAGFSSNKIVYAGVGKTDFEISYAISENILSFNVESFMELDVINEIAGKQEKKA 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + +R+NP+V S+ G +++ K NV G+ H + Sbjct: 149 NVSIRVNPNVDPKTHPYISTGLKKSKFGIDIDQALDAYKKAAKLENLNVVGVHCHIGSQI 208 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFS 222 F + ++ + ++++I +GGG+ + Sbjct: 209 MDISVFREAAEKVVDLVFKLKKEGIELKFIDMGGGLGVKYHPDDNPPTPKDLADAIIPVV 268 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI 281 ++ +++ +EPG +++ L T V+ + + + ++ DS + V + + Sbjct: 269 KQTGLKLIIEPGRSLIAEAGALITKVIFLKDKQEKHFVIVDSGMNDLVRPAMYNAYHHVL 328 Query: 282 YPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 A + G C GD V+ GD ++ Y + + +N Sbjct: 329 NVQEKDEEMIADIVGPICETGDFLALDRKIGKVERGDLLAIMTAGAYGSSMSSNYNVRPR 388 Query: 340 PTIAVKNVDGTIKAIREFSY 359 + + Y Sbjct: 389 ALEVLVDGSNFKVIKEREDY 408 >gi|205356645|ref|ZP_03223407.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni CG8421] gi|205345502|gb|EDZ32143.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni CG8421] Length = 382 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 139/376 (36%), Positives = 212/376 (56%), Gaps = 18/376 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EI + S I+FN+++Q +KF+ A+ +GLR Sbjct: 66 EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S A+LK Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKA 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG +I Q++W++ GGG H T K Y V+ K FS+KY VQ+YLEPGEA+ T Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKES 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D Y I + FNGI +P + + N Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLN 362 Query: 347 VDGTIKAIREFSYNDY 362 ++ IREFSY DY Sbjct: 363 AKNELQMIREFSYKDY 378 >gi|57238538|ref|YP_179669.1| carboxynorspermidine decarboxylase [Campylobacter jejuni RM1221] gi|57167342|gb|AAW36121.1| carboxynorspermidine decarboxylase [Campylobacter jejuni RM1221] gi|315058969|gb|ADT73298.1| Carboxynorspermidine decarboxylase, putative [Campylobacter jejuni subsp. jejuni S3] Length = 382 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 139/376 (36%), Positives = 212/376 (56%), Gaps = 18/376 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EI + S I+FN+++Q +KF+ A+ +GLR Sbjct: 66 EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S A+LK Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKA 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG +I Q++W++ GGG H T K Y V+ K FS+KY VQ+YLEPGEA+ T Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D Y I + FNGI +P + + N Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLN 362 Query: 347 VDGTIKAIREFSYNDY 362 ++ IREFSY DY Sbjct: 363 AKNELQMIREFSYKDY 378 >gi|291277519|ref|YP_003517291.1| diaminopimelate decarboxylase [Helicobacter mustelae 12198] gi|290964713|emb|CBG40568.1| diaminopimelate decarboxylase [Helicobacter mustelae 12198] Length = 412 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 121/386 (31%), Gaps = 24/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D +K+ N + ALK + + + + G S+ E Sbjct: 16 GTPLYVYDMEKIKANFLAYKDAFSGRKSLICYALKANSNLSVIKIIAELDGGADCVSIGE 75 Query: 63 VMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 V ++ +A+ I + ++L + + A++L Sbjct: 76 VKRAILAGIKPYRIIFSGVGKKDSEIKEALKIGILFINVESYAELLRVEAVAKELGSIAR 135 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + R+NP++ ++ G + ++ G+ FH + Sbjct: 136 ISVRVNPNIDPKTHPYISTGLSENKFGVEMEEARRMYLYAHKSDFLQPIGVHFHIGSQLT 195 Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFSEK 224 + + I +++ +GGG+ KD + + D+ Q + Sbjct: 196 QLDPIAQSTQKIADFARGLVAIGIDLKFFDVGGGVGICYKDEGVFDIHDYAQSILSKLSG 255 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283 V I EPG +IV N+ L T VL K ++ D ++ + L Sbjct: 256 LDVTIICEPGRSIVGNSGYLVTQVLYEKHTPKKRFVIVDGAMNDLLRPSLYDAHHGVSVI 315 Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 A V G C + D + P+ GD + FE+ Y + + +N Sbjct: 316 KQRKEEGELSLADVVGPICESADFLAKNIELPPMHAGDFVIFENAGAYGFSMSSNYNTRG 375 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 +G R S Sbjct: 376 RCAEVGVQKEGVFLLRRRESLEFLIR 401 >gi|146278482|ref|YP_001168641.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides ATCC 17025] gi|145556723|gb|ABP71336.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides ATCC 17025] Length = 421 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 116/392 (29%), Gaps = 26/392 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + L G S Sbjct: 25 VGTPFYCYSAATLERHYRLFTEALTPLPHMVCFAIKSLSNLAVLKLLGDLGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E + GE ++ ++ A+ + ++ + A L Sbjct: 85 EYLRARAAGVPGERIVFSGVGKTREEMRLALEGGIRQFNVESEPEMRALSEVAASMDLRA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 I +R+NP V + ++ G + V G+ H + Sbjct: 145 PIAVRVNPDVDARTHEKIATGKKENKFGIPIARASEVYAEAAALPGLEVVGIDVHIGSQL 204 Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F ++ +I + LGGG+ D+ +K Sbjct: 205 TDLEPFEQAYLKVADLTGRLRAEGHEIRRLDLGGGLGIPYTRSNEAPPLPTDYGALIKRT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N+ L + V+ + ++ +I+D+++ V + Sbjct: 265 VGHLGCEIEIEPGRLISGNSGVLVSRVIYVKNGEGRDFLILDAAMNDLVRPSMYGAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C GD F + P+ GD ++F Y + +N Sbjct: 325 VPVAEAAPGTEGQPYDVVGPICETGDTFAKARPLPPMSEGDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + D ++++ S Sbjct: 385 SRPLVPEVLVRGDHFAVIRARPTFDEMLRRDS 416 >gi|283956889|ref|ZP_06374362.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni 1336] gi|283791615|gb|EFC30411.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni 1336] Length = 382 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 139/376 (36%), Positives = 212/376 (56%), Gaps = 18/376 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EI + S I+FN+++Q +KF+ A+ +GLR Sbjct: 66 EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S A+LK Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKV 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG +I Q++W++ GGG H T K Y V+ K FS+KY VQ+YLEPGEA+ T Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D Y I + FNGI +P + + N Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLN 362 Query: 347 VDGTIKAIREFSYNDY 362 ++ IREFSY DY Sbjct: 363 AKNELQMIREFSYKDY 378 >gi|153003227|ref|YP_001377552.1| diaminopimelate decarboxylase [Anaeromyxobacter sp. Fw109-5] gi|152026800|gb|ABS24568.1| diaminopimelate decarboxylase [Anaeromyxobacter sp. Fw109-5] Length = 422 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 123/387 (31%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + + A+K A + + G S E Sbjct: 26 GTPLYVYSTATLTRHWKVLHRSLAGIRHVVCYAVKANANLALLARFAKLGSGFDIVSAGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K + A S + + +L + A+++ Sbjct: 86 LYRVLKAGGDPRKVVFSGVGKRDDEIAFALESGVRVLNVESAGELARISIVARRMGVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LR+NP V ++ G + +V G+ H + Sbjct: 146 IALRVNPDVDPKTHPYISTGLRENKFGVSVDEARRLYPLAAKDEALHVMGIASHIGSQIT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + F + + +E + + +GGG+ KD + +++ + Sbjct: 206 TVKPFLDAIDRVLSLARELEKQGIPLAHLDVGGGLGIRYKDEDPPHPDEYGAAIRKALAR 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + ++ LEPG +V N L T VL + + K V+VD+++ V +Y I P Sbjct: 266 WKGEVLLEPGRVLVGNAGVLVTRVLHVKRSGRKTFVVVDAAMNDLVRPA-IYDAHHDIEP 324 Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 P A V G C + D GD ++ Y + + +N Sbjct: 325 VGPPREGEREVVADVVGPICESSDFLARKRRMPEPVPGDLLAVRSAGAYGFSMSSNYNAR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + A R +Y D Sbjct: 385 PRAAEVLVDGDQALLARRRETYADLVR 411 >gi|118475146|ref|YP_891540.1| carboxynorspermidine decarboxylase [Campylobacter fetus subsp. fetus 82-40] gi|118414372|gb|ABK82792.1| carboxynorspermidine decarboxylase [Campylobacter fetus subsp. fetus 82-40] Length = 377 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 138/372 (37%), Positives = 203/372 (54%), Gaps = 9/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IKTP Y+ ++ L NNL I +G K+L ALK FA G + +++Y++G T S L+ Sbjct: 6 IKTPAYVCEEAALENNLKILKNISDESGAKVLCALKGFAFSGAMELVSKYLNGATCSGLH 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E H Y+ A+ D +ID VLS ++FN+ +Q NKF+ K+ K K IGLR Sbjct: 66 EAKYAKYHGFKEIHTYSPAFSDDDIDEVLSISHHVVFNSFAQWNKFRSKSIKSGKSIGLR 125 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP+ S S + +P FSRLG + S + V GL FH CE +S +LK Sbjct: 126 VNPNTSASPTDMYNPCGEFSRLGITKDNFDFSNLDGVEGLHFHALCE-ESAKSLEFVLKA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++F I +++WI+ GGG H T Y + +K F EKY QI++EPGEA+ Sbjct: 185 FEEQFRTIIPKMKWINFGGGHHITKSGYDINLLINLIKSFKEKYGTQIFIEPGEAVGWRC 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCLA 299 L ++VLDI N + I+D+S E H+PD +L +I G + G +CLA Sbjct: 245 GFLISSVLDIVTNGEKTCIIDASAECHMPDTILMPYRPSIRGENKNGKFAYRFGGATCLA 304 Query: 300 GDIFGE------FHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 GDI G F F+ +K+GD++ FED Y I + FNG+ +P + + N +G +K Sbjct: 305 GDIVGAAAGEPIFKFDNEIKVGDKVIFEDQIHYTIVKNTTFNGVKLPNLVMMNKNGDVKI 364 Query: 354 IREFSYNDYYNN 365 IR+F Y++Y Sbjct: 365 IRDFGYDEYSRR 376 >gi|325294479|ref|YP_004280993.1| diaminopimelate decarboxylase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064927|gb|ADY72934.1| diaminopimelate decarboxylase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 420 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 117/386 (30%), Gaps = 23/386 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + L + G + S+ E Sbjct: 31 GTPLYVYSQSALEHWFKEFDSAFSSIEHITCFAVKSNSNISVLKVLKELGAGADTVSMGE 90 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + + + K + + S+L A+KL K Sbjct: 91 IFRALTAGIDPKKIVFAGVGKRIDEIEYGLEKGILMFNVESESELYAINRVAEKLGKVAP 150 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I R+NP V+ S+ G + IE N G+ FH + Sbjct: 151 IAFRVNPDVNPKTHPYISTGLKTSKFGIAYEGAIELYKKAKNLKNINPIGIHFHIGSQIT 210 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + I++ +IE+ GGG+ + P + + + Sbjct: 211 DVSVFGEAARKIKEIVKELYSVGIEIEYFDAGGGLGISYNPNEPPVPARALADEIIPIIK 270 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY 282 ++ LEPG + N L + V+ E + IVD+ + L + Sbjct: 271 DLGCKLILEPGRRLAGNAGILLSQVIYKKERHEKLFYIVDAGMNDLARPSLYKAYHHIVP 330 Query: 283 PNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + A V G C GDI E P+ GD I+ Y + +N Sbjct: 331 ASKKEGNLKKADVVGPICETGDILAEDRELPPLNEGDIIAVLSAGAYGFTMASNYNSRPR 390 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + + D + Sbjct: 391 PAEVIAKEGRAEIIRQRETLGDLISK 416 >gi|224417821|ref|ZP_03655827.1| carboxynorspermidine decarboxylase NspC [Helicobacter canadensis MIT 98-5491] gi|253827161|ref|ZP_04870046.1| carboxynorspermidine decarboxylase NspC [Helicobacter canadensis MIT 98-5491] gi|313141362|ref|ZP_07803555.1| carboxynorspermidine decarboxylase [Helicobacter canadensis MIT 98-5491] gi|253510567|gb|EES89226.1| carboxynorspermidine decarboxylase NspC [Helicobacter canadensis MIT 98-5491] gi|313130393|gb|EFR48010.1| carboxynorspermidine decarboxylase [Helicobacter canadensis MIT 98-5491] Length = 403 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 139/392 (35%), Positives = 213/392 (54%), Gaps = 27/392 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+++++K + NL+ I+K +G K+LLALK +A W FD +Y+ G T+S LY Sbjct: 13 IPSPCYVLEEEKFIKNLEILDSIQKESGAKILLALKGYALWRSFDIAKKYLSGITASGLY 72 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK----- 116 E LG+E FGGE ++ AYK E+ ++ D IIFN+ Q FK + ++ Sbjct: 73 EARLGYETFGGEITTFSPAYKYEEMQELVKISDHIIFNSFLQWQTFKPLIDEANQWRKNK 132 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKS 171 ++GLR+NP S + +P SRLG K+ + K ++GL FH +CE S Sbjct: 133 IQVGLRVNPQYSEVTPAIYNPCVEGSRLGITPKEFKKGVKKYGLKGISGLHFHTHCEQNS 192 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231 LK + FG +I Q++WI+ GGG H T KDY + + +K+F +++ VQ+YL Sbjct: 193 DALKRT-LKYFIQHFGKYIPQMQWINFGGGHHITRKDYNRELLVKIIKKFKKRFDVQVYL 251 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN------- 284 EPGEA+ L +V+DI N ++ I+D S AH+PD L + + Sbjct: 252 EPGEAVGWQCGFLMGSVIDIVHNGVDIAILDVSATAHMPDCLEMPYRPMVRNSYLAKATS 311 Query: 285 ---------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 YT G +CLAGDI G++ F++P+K+GDRI FED+ Y I + N FN Sbjct: 312 KNGHLKLKGEQKYTYRFGGPTCLAGDIIGDYSFKEPLKLGDRIIFEDMVHYTIVKNNTFN 371 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 G+ +P+I + + +G K + +SY Y S Sbjct: 372 GVPLPSIGMIDKEGRFKLFKSYSYESYKERNS 403 >gi|220903410|ref|YP_002478722.1| carboxynorspermidine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867709|gb|ACL48044.1| carboxynorspermidine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 406 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 127/395 (32%), Positives = 203/395 (51%), Gaps = 30/395 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY-----MDGTT 56 I +P +++D+ +L N +++ G K+LLALK +AAWG F L+++ + G Sbjct: 13 IPSPCFVLDENQLSANAAVLNSVQERTGAKILLALKGYAAWGTFPLLSRFKGHGPLWGAC 72 Query: 57 SSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD------- 109 +SS+ E L E+FGGE HA+ + E+ +L+ D I+FN+ +Q +F Sbjct: 73 ASSVDEARLAREEFGGEVHAFAAGWNRREMAELLTLTDHIVFNSTAQWREFAPAIAMWNK 132 Query: 110 -KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 + + GLRINP S + +P P SRLG + K + + ++GL FH CE Sbjct: 133 GRCPDRQIQCGLRINPEHSEGAVEIYNPCAPGSRLGIRRKHFDPTAMTGISGLHFHTLCE 192 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 L +E FG ++ Q WI++GGG H T Y + C+ L ++ ++Y Q Sbjct: 193 QG-ADALERTLAAVESHFGQWLPQCRWINMGGGHHITKPGYDLDLLCRLLTQWRDRYQAQ 251 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284 IYLEPGEA+ + L TVLD+ E + I+D + H+PD + + Sbjct: 252 IYLEPGEAVALDAGWLVATVLDVIEADMPIAILDIGIPCHMPDVIEMPYRPRVRYEHDGA 311 Query: 285 --------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 +T + G+SCLAGD+ GE+ F+ P+K G R+ FED+A Y++ + FNG Sbjct: 312 AVLAGEAGQKAWTCRLAGKSCLAGDVAGEYSFDAPLKPGQRLVFEDMAIYSMVKTTTFNG 371 Query: 337 INMPTIAVKNVDGT----IKAIREFSYNDYYNNLS 367 + +P+I + D + +REF Y ++ N LS Sbjct: 372 LRLPSIGICGPDAAGDMYFRMLREFGYANFKNRLS 406 >gi|222054228|ref|YP_002536590.1| diaminopimelate decarboxylase [Geobacter sp. FRC-32] gi|221563517|gb|ACM19489.1| diaminopimelate decarboxylase [Geobacter sp. FRC-32] Length = 417 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 57/383 (14%), Positives = 113/383 (29%), Gaps = 22/383 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P+Y+ + L + + ++K + + G S Sbjct: 25 IGSPFYVYSQATLERHFRAMDEAFATVSHTICYSMKANSNLAVVKNFVNLGGGVDIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ Y+ K + N + +L + + A ++ +K Sbjct: 85 ELYRALKAGASPSKVVYSGVGKKDDEIEYALNTGILMFNVESEQELTRISEIANRMGRKA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 G+ R+NP V ++ G IE + + G+ H + Sbjct: 145 GIAIRVNPDVDPQTHPYITTGLKNAKFGITIDRAIEEYRRAKGLPGIEILGIDCHIGSQL 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223 F +K ++ G + + LGGG+ D + + ++ Sbjct: 205 TKVSPFVDAIKKLKNVIGKLKEMGISLTYFDLGGGLGIQYNDEAPPLPADYGSEIIKETK 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES---A 279 + + EPG +V N L L I + I +D+ + L Sbjct: 265 DLGMHLIFEPGRNLVGNAGILVAKTLYIKHRDEKNFIVIDAGMNDLARPALYGSFHGIKP 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G TA + G C +GD + K GD ++F Y + +N Sbjct: 325 VVKNQDGTITADIVGPICESGDFLAKDREVPMFKQGDLMAFMSAGAYGFAMSSSYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 + + + D Sbjct: 385 VAEVMVKGNKFEVIRERETVEDL 407 >gi|238917346|ref|YP_002930863.1| hypothetical protein EUBELI_01423 [Eubacterium eligens ATCC 27750] gi|238872706|gb|ACR72416.1| Hypothetical protein EUBELI_01423 [Eubacterium eligens ATCC 27750] Length = 409 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 134/405 (33%), Positives = 211/405 (52%), Gaps = 41/405 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP Y+ID++ L++NL+ + ++ G +LLA K F+A+ + + +Y+ GTT+S +Y Sbjct: 6 LKTPAYVIDEKMLIHNLEILHKVEEDTGCHILLAQKAFSAYAEYPLIGKYISGTTASGIY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E G E H + A+ D ++D +++ CD ++FN+VSQL K K + + GLR Sbjct: 66 EARLGAECMGKENHVFAPAFTDEDMDELVNICDHVVFNSVSQLKKHKARCIEAGVSFGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFLC 174 +NP S + DP P SRLG K+ + + + G+ FH CE S Sbjct: 126 VNPEFSTQGDHAIYDPCAPGSRLGVTLKNLKAALEEEPDVLSGMEGIHFHTLCEQNSDD- 184 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 A LK +E++FG + ++W++ GGG H T +DY ++ + + +KY VQ+Y+EPG Sbjct: 185 LEATLKAVEEKFGFLMKDMKWVNFGGGHHITREDYDIETLEKCISHVKKKYDVQVYVEPG 244 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA--------------- 279 EA+ N L TTVLD EN +I+D+S H+PD L + Sbjct: 245 EAVALNAGYLVTTVLDKVENGITTLILDASAACHMPDVLEMPYTPPLRGGLKISDMEDEY 304 Query: 280 ------------------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 G Y + +CLAGDI G++ F + + +GDR+ FE Sbjct: 305 GIDKDIEIDFDMDVKEGIWKPAKNGRYRYRLSSYTCLAGDIIGDYQFGREINVGDRLVFE 364 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 D+A Y++ + N FNGI +P I + + DG K + F Y D+ L Sbjct: 365 DMAIYSMVKNNTFNGIQLPDIVIMDSDGECKVWKHFGYEDFKGRL 409 >gi|86160486|ref|YP_467271.1| diaminopimelate decarboxylase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776997|gb|ABC83834.1| diaminopimelate decarboxylase [Anaeromyxobacter dehalogenans 2CP-C] Length = 427 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 69/387 (17%), Positives = 127/387 (32%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + + A+K + + + G S E Sbjct: 26 GTPLYVYSTATLTRHWKVLHRSLAGLDHLVCYAVKANSNLAVLSLFARLGSGFDIVSGGE 85 Query: 63 VMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--HKK 117 + + G+ V +D EI L + + + +L + A+++ Sbjct: 86 LYRVLKAGGHPGKVVFSGVGKRDDEIAFALESGVKVLNVESAPELARVSIVARRMGVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 I LR+NP V ++ G + + + G+ H + Sbjct: 146 IALRVNPDVDPKTHPYISTGLSENKFGVSVDEARRLYALAAQDPALELRGVACHIGSQIT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + F + + K+ G ++ + +GGG+ T D + + +K+ + Sbjct: 206 TVRPFLDAIARVLALVKDLGKQGIRLGHVDVGGGLGITYADEEPPHPDEYGRAIKKALSR 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + ++ LEPG +V N L T VL + E+ K V+VD+++ V Y I P Sbjct: 266 FDGEVMLEPGRVLVGNAGVLVTRVLHVKESGRKVFVVVDAAMNDLVRPS-YYDAHHEIEP 324 Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 P V G C + D GD + Y + +N Sbjct: 325 AGAPRKDAEEIVCDVVGPICESSDFLARKRRMPRPVRGDLLVVRSAGAYGFAMSSNYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + DG A R +Y D Sbjct: 385 PRAAEVLVDGDGARLARRRETYADLVR 411 >gi|120602484|ref|YP_966884.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris DP4] gi|120562713|gb|ABM28457.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris DP4] Length = 412 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 66/382 (17%), Positives = 116/382 (30%), Gaps = 22/382 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + A ++K + + L G S E Sbjct: 26 GTPLYVYSAGTLERHYRAFDSAFGKAAHLTCFSVKACSNIHILKLLGSLGAGVDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + G Y+ K + D ++ +L ++ A + Sbjct: 86 LHRALLAGIPGRRIVYSGVGKRPDEIRSALEADILMFNVESLQELRTIEEVAASMGTTAR 145 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-----KNVN--GLMFHNNCENK 170 LRINP V ++ G + +E + +++ G+ H + Sbjct: 146 VSLRINPDVDPHTHPYISTGLQKNKFGIEMTQALEGYMLARDLPHIDPIGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 S F L + I ++ LGGG+ T + + E+ Sbjct: 206 SLSPFLEALDKVLEFREHLSILGLDISYLDLGGGLGITYGEETPPHPRDFGRAVLERTKG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---AT 280 ++ + LEPG I N L T VL K VIVD+++ V L Sbjct: 266 LNLTLVLEPGRVIAGNAGILVTEVLYTKTTPSKQFVIVDAAMNDLVRPSLYASYHRIAEV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + V G C +GD V+ G+ ++ Y + + +N Sbjct: 326 LPHGRTEQAVDVVGPICESGDFLARDRVLPAVEQGELLAVFSAGAYGFSMSSQYNSRPRA 385 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + D R +Y+D Sbjct: 386 AEVLVRGDTAKSIRRRETYDDL 407 >gi|86151988|ref|ZP_01070201.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 260.94] gi|315124941|ref|YP_004066945.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841096|gb|EAQ58345.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 260.94] gi|315018663|gb|ADT66756.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 382 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 138/376 (36%), Positives = 212/376 (56%), Gaps = 18/376 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EI + S I+FN+++Q +KF+ A+ +GLR Sbjct: 66 EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S A+LK Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTIEGLHFHALCE-ESADALEAVLKA 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG +I Q++W++ GGG H T K Y V+ K FS+KY VQ+YLEPGEA+ T Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D Y I + FNG+ +P + + N Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGVRLPNLMLLN 362 Query: 347 VDGTIKAIREFSYNDY 362 ++ IREFSY DY Sbjct: 363 AKNELQMIREFSYKDY 378 >gi|160889900|ref|ZP_02070903.1| hypothetical protein BACUNI_02331 [Bacteroides uniformis ATCC 8492] gi|156860892|gb|EDO54323.1| hypothetical protein BACUNI_02331 [Bacteroides uniformis ATCC 8492] Length = 366 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 122/367 (33%), Positives = 191/367 (52%), Gaps = 9/367 (2%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 +++ L NL + AGV+++LA K FA W F +Y+D +T+SS+YE L E Sbjct: 1 MEEGLLRKNLALIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYEARLALE 60 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSV 126 +FG + H Y+ AY + + ++ I FN++SQ ++F A+ G+RINP Sbjct: 61 EFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFHRFYPVVVAEGSGISCGIRINPEY 120 Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 S + L +P P +R G E + G H +CE+ S+ L+++E +F Sbjct: 121 SEVETELYNPCAPGTRFGVMADPLPEELPVGIEGFHCHCHCESSSYE-LEHTLEHLEGKF 179 Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLN 245 + +QI+W++LGGG T KDY V+ + L+ +YS QI LEPG A T L+ Sbjct: 180 SRWFSQIKWLNLGGGHLMTRKDYDVEHLVRLLQGLKGRYSHLQIILEPGSAFTWQTGVLS 239 Query: 246 TTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAG 300 + ++DI EN + + S H+PD L + GPY + G SCL+G Sbjct: 240 SEIVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAEMGDAGPYVYRLGGNSCLSG 299 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 D G + F+ ++IG+RI FED+ Y + N FNGI+ P IA+ +G + ++FSY Sbjct: 300 DYMGLWSFDHELQIGERIVFEDMIHYTTVKTNMFNGIHHPAIAMWTKEGKAEVFKQFSYE 359 Query: 361 DYYNNLS 367 DY +S Sbjct: 360 DYRGRMS 366 >gi|84515838|ref|ZP_01003199.1| diaminopimelate decarboxylase [Loktanella vestfoldensis SKA53] gi|84510280|gb|EAQ06736.1| diaminopimelate decarboxylase [Loktanella vestfoldensis SKA53] Length = 422 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 66/391 (16%), Positives = 123/391 (31%), Gaps = 26/391 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+Y+ L + A + A+K + + L Q G S E Sbjct: 26 GTPFYVYSTATLTRHFQLFDEALGFADHLVCFAMKSLSNIAVLRVLAQAGAGMDVVSGGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G+ ++ K D A+ + ++ A+ L K Sbjct: 86 YLRAKAAGVPGDRIVFSGVGKTADEMRMALQGGIRQFNVESEPEMVALDAVARSLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V + ++ G E V G+ H + Sbjct: 146 ITLRINPDVDAKTHAKIATGKSENKFGIPISRAREVYALAATLKGLKVVGIDVHIGSQLT 205 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFS 222 F A + + QI + LGGG+ + D+ ++ Sbjct: 206 ELAPFEAAYAKVAELTEVLRADGHQITRLDLGGGLGIPYERSNAAPPLPSDYGAMIERTL 265 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATI 281 +I +EPG I N + + V+ + ++ +I+D ++ + + I Sbjct: 266 GHLGCEIEIEPGRLISGNAGLMVSQVIYVKSGEDRDFLILDGAMNDLIRPAMYDAWHDII 325 Query: 282 YPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 P + G C +GD F + P++ GD ++F Y + +N Sbjct: 326 PVVEPAPGTEPARYDIVGPVCESGDTFAKAREVAPMQPGDLVAFRSAGAYGAVMASEYNS 385 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + + D + SY + S Sbjct: 386 RPLIPEVLVHGDQFAVIRKRPSYEEMIARDS 416 >gi|91776793|ref|YP_546549.1| diaminopimelate decarboxylase [Methylobacillus flagellatus KT] gi|91710780|gb|ABE50708.1| diaminopimelate decarboxylase [Methylobacillus flagellatus KT] Length = 445 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 118/386 (30%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + G S E Sbjct: 55 GTPTYVYSRAALESAYTRFAAGFDGQDHLVCFAVKSNPSLAVLNLFARLGAGFDIVSGGE 114 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKL--HKK 117 + ++ K N FN + S+L++ D A +L Sbjct: 115 LARVLAAGGDPAKVVFSGVGKTETEMETALNAGIFCFNVESASELDRLNDVAGRLGKTAP 174 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP+V ++ G +D V+G+ H + Sbjct: 175 VSLRVNPNVDAKTHPYISTGLKNNKFGVAYEDAFNLYQHAASLPNIAVHGVDCHIGSQLT 234 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 F + + ++ I LGGGI D + + + Sbjct: 235 ELSPFMDAFDRVLALVDQLEAEGIRVAHIDLGGGIGICYADETPPDFAAYAAAMLQKLGD 294 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283 V++ EPG A+V N L T V + KN IVD+++ + L Sbjct: 295 RKVKLVFEPGRALVGNAGALITKVEYLKHTEAKNFAIVDAAMNDLMRPALYDAYHEIAAV 354 Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + G C +GD G ++ GD ++ Y ++ + +N Sbjct: 355 VPATDPSSAQVYEIVGPVCESGDFLGHDRKLA-LQQGDLLAVLSAGAYGMSMSSNYNTRP 413 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D T + + Sbjct: 414 RAAEVMVDGDKTHLIRERETVAQLFA 439 >gi|121612689|ref|YP_001001162.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|167006055|ref|ZP_02271813.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|87249963|gb|EAQ72922.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] Length = 382 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 141/376 (37%), Positives = 214/376 (56%), Gaps = 18/376 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EID + S I+FN+++Q +KF+ A+ +GLR Sbjct: 66 EAKFAKEYMDKEIHTYSPAFKEDEIDEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S A+LK Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTIEGLHFHALCE-ESADALEAVLKV 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG +I Q++W++ GGG H T K Y V+ K FS+KYSVQ+YLEPGEA+ T Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYSVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKES 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D Y I + FNGI +P + + N Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLN 362 Query: 347 VDGTIKAIREFSYNDY 362 ++ IREFSY DY Sbjct: 363 AKNELQMIREFSYKDY 378 >gi|260772924|ref|ZP_05881840.1| carboxynorspermidine decarboxylase putative [Vibrio metschnikovii CIP 69.14] gi|260612063|gb|EEX37266.1| carboxynorspermidine decarboxylase putative [Vibrio metschnikovii CIP 69.14] Length = 376 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 166/368 (45%), Positives = 239/368 (64%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TPY++ID+ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LNTPYFMIDEAKLIANLEIAKRLKERSGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+EKFGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + +GLR Sbjct: 66 EVKLGYEKFGGETHAYSVGYSEQDVKEVADICDKMIFNSQSQLAAYRHLVEGKA-SLGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R +SRLG + S ++NG+MFH NCENK F A+L Sbjct: 125 LNPGVSYAGQDLANPARKYSRLGVQFDKLDTSVFDSINGVMFHMNCENKDVDAFIALLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I +FG ++ +++W+SLGGG+ FT Y V LK F++K+ VQ+YLEPGEAI+T T Sbjct: 185 ISDKFGAYLDKLDWVSLGGGVFFTWPGYDVDKLADALKAFADKHQVQLYLEPGEAIITQT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCLA 299 T L TV+DI +N IVDS+ EAH D L+Y+E A++ G + ++ SCLA Sbjct: 245 TDLVVTVVDIVDNEMQTAIVDSATEAHRLDTLIYREPASVLEANQQGEHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F +P++IG ++ D AGY + + NWFNG+ MP++ + DG I + EF Y Sbjct: 305 GDQFCVAKFAEPLQIGQKLHIMDSAGYTMVKLNWFNGLKMPSVYCERRDGQIIKLNEFGY 364 Query: 360 NDYYNNLS 367 D+ +LS Sbjct: 365 QDFKRSLS 372 >gi|89052972|ref|YP_508423.1| diaminopimelate decarboxylase [Jannaschia sp. CCS1] gi|88862521|gb|ABD53398.1| diaminopimelate decarboxylase [Jannaschia sp. CCS1] Length = 421 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 119/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + A+K + + + G S Sbjct: 25 VGTPFYVYSTATLTRHFQLFEEALGGMDHLICFAVKSNSNQAVLSHMAMLGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E + G+ ++ +D A+ + ++++ A L + Sbjct: 85 EYLRAKAAGVPGDKIVFSGIGKTEDEMRLALNGGIRQFNVESEPEMHRLSRVATALGVTV 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169 + R+NP V R + G E V G+ H + Sbjct: 145 PITVRVNPDVDAKTHAKIATGRKEDKFGIPIARAREVYALAASLPGLQVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + I + LGGG+ + ++ + +K Sbjct: 205 TDLEPFEIAYAKVAELTEQLREDGHTITRLDLGGGLGIPYERSNSAPPLPIEYGEVIKRT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N L + + + ++ +I+D+++ + + Sbjct: 265 VGHLGCEIEIEPGRLISGNAGLLVASTIYVKHGEDRDFLILDAAMNDLIRPAMYGAYHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + G C +GD F + PVK D I+F Y + +N Sbjct: 325 IPVVEPAPGAEQSPYDIVGPVCESGDTFAKQRDLPPVKEADLIAFRSAGAYGAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + N D S++D N Sbjct: 385 TRPLIPEVLVNGDQFAVIRARPSFDDMINR 414 >gi|288559410|ref|YP_003422896.1| diaminopimelate decarboxylase LysA [Methanobrevibacter ruminantium M1] gi|288542120|gb|ADC46004.1| diaminopimelate decarboxylase LysA [Methanobrevibacter ruminantium M1] Length = 427 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 69/394 (17%), Positives = 135/394 (34%), Gaps = 29/394 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++++ +N + K+ A K + L + + S Sbjct: 28 GTPIYVIDEERVRDNYNRFYNAFTKFYPKFKVFYACKANTNIAVLKILEEEGCCIDAVSP 87 Query: 61 YEVMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 EV + + F G+ + ++ E+D V S + ++VS L + + KKI Sbjct: 88 GEVYICKKMGFSGDRILFTGNNIRNDEMDYVNSEDVILNIDSVSALKRLAESIDPQGKKI 147 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSF 172 R+NP V S+ G + + G+ H Sbjct: 148 SFRVNPMVGAGHHGHCITGGEMSKFGIMETEAVEIYKLAKELGFEPVGMHSHIGSGILDP 207 Query: 173 LCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------KDFCQRLKE 220 F +++ G E+I GGG+ ++ + KE Sbjct: 208 EPFKLAIESTMNIAGKVHQEAGIDFEFIDFGGGVGIPYTPEEELLDLEHFAEENIKLFKE 267 Query: 221 FSEKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 E++ + +YLEPG IV + + + V + E+ + + VD+ + + Sbjct: 268 KLEEFDMGEPILYLEPGRYIVGDASVILVEVNSVKESYRKFIGVDAGFNTLLRPAMYDSY 327 Query: 278 SATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + N T V G C +GD+F ++ GD + + Y + Sbjct: 328 HHIVVANKMNEEPTQTVDVAGNVCESGDLFARDRPLPDIEEGDILGILNAGAYGYTMASN 387 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 +N +P + + +++D + S Sbjct: 388 YNSRPLPAEILVKNGESFVIREAQTFDDIFEKQS 421 >gi|254487951|ref|ZP_05101156.1| diaminopimelate decarboxylase [Roseobacter sp. GAI101] gi|214044820|gb|EEB85458.1| diaminopimelate decarboxylase [Roseobacter sp. GAI101] Length = 421 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 56/390 (14%), Positives = 117/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ LL + + + A+K + + TL Q G S Sbjct: 25 VGTPFYVYSTATLLRHFKAFDDALEGMDHLVCYAMKANSNQAVLRTLAQAGAGMDVVSAG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E + G+ ++ K A+ + ++ A+ L K Sbjct: 85 EYLRAKAAGVPGDKIVFSGVGKTAAEIRLALEGGIRQFNVESEPEMEVLDTVARSLGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 I +R+NP V + ++ G E V G+ H + Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYRMAGAMAGLEVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + I + LGGG+ + +D+ ++ Sbjct: 205 TDLAPFEQAYDKVAELTEVLRADGHNIRRLDLGGGLGIPYERSNEAPPLPRDYGAMVQRK 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 ++ +EPG I N + + V+ + ++ D ++ + + Sbjct: 265 LGHLGCEVEIEPGRLIAGNAGLMISEVIYVKSGEGRDFLILDGAMNDLIRPAMYEAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + G C +GD F + + GD ++F Y + +N Sbjct: 325 IPVVEPAPGAEQQPYDIVGPVCESGDTFAKQRMMPALAAGDLVAFRSAGAYGAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + D ++++ N Sbjct: 385 SRALIPEVLVKDDQFAVIRPRPTFDEMINR 414 >gi|197124574|ref|YP_002136525.1| diaminopimelate decarboxylase [Anaeromyxobacter sp. K] gi|196174423|gb|ACG75396.1| diaminopimelate decarboxylase [Anaeromyxobacter sp. K] Length = 427 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 68/387 (17%), Positives = 126/387 (32%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + + A+K + + + G S E Sbjct: 26 GTPLYVYSTATLTRHWKVLHRSLAGLDHLVCYAVKANSNLAVLSLFARLGSGFDIVSGGE 85 Query: 63 VMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--HKK 117 + + G+ V +D EI L + + + +L + A+++ Sbjct: 86 LYRVLKAGGHPGKVVFSGVGKRDDEIAFALESGVKVLNVESAPELARVSIVARRMGLRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + + V G+ H + Sbjct: 146 VALRVNPDVDPKTHPYISTGLSENKFGVSVDEARRLYALAAQDPALEVRGVACHIGSQIT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + F + + K+ G ++ + +GGG+ T D + + +K+ + Sbjct: 206 TVRPFLDAIARVLSLVKDLGKQGIRLGHVDVGGGLGITYADEEPPHPDEYGRAIKKALSR 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + ++ LEPG +V N L T VL + E+ K V+VD+++ V Y I Sbjct: 266 FDGEVMLEPGRVLVGNAGVLVTRVLHVKESGRKVFVVVDAAMNDLVRPS-YYDAHHEIEA 324 Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 P V G C + D GD + Y + +N Sbjct: 325 AGAPRKDADEIVCDVVGPVCESSDFLARKRRMPRPVRGDLLVVRSAGAYGFAMSSNYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + DG A R +Y D Sbjct: 385 PRAAEVLVDGDGARLARRRETYADLVR 411 >gi|152990136|ref|YP_001355858.1| diaminopimelate decarboxylase [Nitratiruptor sp. SB155-2] gi|151421997|dbj|BAF69501.1| diaminopimelate decarboxylase [Nitratiruptor sp. SB155-2] Length = 400 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 67/384 (17%), Positives = 118/384 (30%), Gaps = 21/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D ++ N + K + A+K + + L + G S+ E Sbjct: 11 DTPLYVYDFNEVAKNYEAIKEAFKARKSIIAYAVKANSNMSLLKHLAELGSGADCVSIGE 70 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 V ++ K + D I + ++ + ++ A+KL K Sbjct: 71 VKRALLAGIPNYKIIFSGVGKRDDEIEEALLKDILYINIESEAETYRVEEIAKKLGKVAR 130 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 R+NP++ ++ G + + S N + FH + Sbjct: 131 VSFRVNPNIDPKTHPYISTGLHENKFGVEIETAKKLYLYAKNSPFINPVAIHFHIGSQLT 190 Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 ++ ++ + I++ +GGG+ KD D+ Q + Sbjct: 191 ELEPIKEASAIVADLVRSLQKLDIDIKFFDVGGGLGIRYKDEKTIEPYDYAQAILSTLRG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG IV N T VL + K VIVD ++ + L Sbjct: 251 TDMTIVCEPGRYIVGNAGVFLTKVLYEKQSDKKRFVIVDGAMNDLLRPSLYNAYHEVEVV 310 Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 A V G C +GD + P K GD I + Y + +N P Sbjct: 311 GKSGNESLADVVGPVCESGDFLAKNRMLPPTKHGDVIVVKSAGAYGFVMASNYNTRPRPA 370 Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365 S+ Sbjct: 371 EVAIENGEDRLIRERESFEYIIEK 394 >gi|91202264|emb|CAJ75324.1| similar to diaminopimelate decarboxylase lysa [Candidatus Kuenenia stuttgartiensis] Length = 429 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 60/399 (15%), Positives = 121/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K +L + + + ++K + + L G S E Sbjct: 26 GTPVYIYSKNAILTRFNELKTAFQEVDATICFSVKSNSNLSVCKILADEGSGFDVVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKL--HKK 117 + + K + D +++++ A + K Sbjct: 86 LFRALKAGGKPSKIVFAGVGKTDKEIQYALENDIFMFNVESIAEIEHINAAACRAGKTAK 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170 + LRINP + + ++ G + + G+ H Sbjct: 146 VALRINPDIDAKTHAKTTTGKKENKFGIDLIVAETIIEKAKAYTNVTICGIHVHLGSPIY 205 Query: 171 SFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224 S + LK I I+++++GGG + V + + F+++ Sbjct: 206 SADPYVNALKKITMFMEKCRNAGINIQYLNIGGGYCISYTGEKVIEPKDYSTQILPFAKE 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVEAHVPDYLLYQESATI- 281 ++ +EPG I N+ L T+V+ +N VI D+++ + L Sbjct: 266 MKCRVIMEPGRFITGNSGILVTSVIYNKQNSHGKKFVICDAAMNDLLRPALYDAFHRIWP 325 Query: 282 ----------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 G + G C + D+F + PV GD ++ Sbjct: 326 VNTSVAMPDVETPDTSVAKQGMDLVDIVGPVCESSDVFAKDRAIPPVNEGDLLAIFSAGA 385 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N + + D I + +Y D Sbjct: 386 YGFTMSSSYNSRPRSCEILVDRDKYIVIRKRETYEDLIA 424 >gi|300022666|ref|YP_003755277.1| carboxynorspermidine decarboxylase [Hyphomicrobium denitrificans ATCC 51888] gi|299524487|gb|ADJ22956.1| carboxynorspermidine decarboxylase [Hyphomicrobium denitrificans ATCC 51888] Length = 381 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 124/372 (33%), Positives = 200/372 (53%), Gaps = 8/372 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y++D L NL A I++ AG K+LLA K FA F + + +DGTT+S Y Sbjct: 10 IATPSYVLDMAALKRNLARAAEIKREAGCKILLATKAFALPAAFPVMREVLDGTTASGEY 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK-FKDKAQKLHKKIGL 120 E LGHE+FG E H Y+ AY E++ + I FN+ Q+ K + +GL Sbjct: 70 EARLGHEEFGKEVHVYSPAYAPGEVERLTKLAQHIYFNSPEQIEKNLATLKAHPNVSVGL 129 Query: 121 RINPSVSYSKF--ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 RINP S + L DP P+SR G + ++V L H+ CE+ + Sbjct: 130 RINPGYSNATLGGALYDPCAPYSRFGATREMLDRVPWEHVGILHAHSLCESG-DAGSVGL 188 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 ++++ + F +I +++ ++ GGG Y ++ +K F +++V++ LEPG V Sbjct: 189 IEHVARAFPDYIRRVDAVNFGGGHFINKPGYDIQKLIAAIKAFRREFNVEVILEPGAGHV 248 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCG 294 + L TVLD+ N K++ I+D+S H+PD L + +I P P++ ++ G Sbjct: 249 VDAGYLVATVLDLHHNEKDIAILDASASTHMPDVLEVPYTPSIVGAGAPGEKPHSYILGG 308 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 ++C+ GDI GE+ F++P+K GDR+ F D+ Y+ + N FNG+ +P +AV N D T + Sbjct: 309 KTCMTGDIIGEYSFDRPLKPGDRLVFTDMMQYSFVKNNTFNGVPLPDLAVLNEDNTCTVL 368 Query: 355 REFSYNDYYNNL 366 R F Y+++ L Sbjct: 369 RAFGYDEFRRRL 380 >gi|294788607|ref|ZP_06753849.1| diaminopimelate decarboxylase [Simonsiella muelleri ATCC 29453] gi|294483484|gb|EFG31169.1| diaminopimelate decarboxylase [Simonsiella muelleri ATCC 29453] Length = 406 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 126/386 (32%), Gaps = 24/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L N + + A+K + + ++ G + S E Sbjct: 18 GTPLYVYSENALTNAFRAYEMAFSGSQPLICYAVKANSNLSIIKHFSELGSGFDTVSGGE 77 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K A N ++ +L++ A+++ K Sbjct: 78 IARVLAAGGAAKKIIFSGVGKSVAEIAFALNAGIKCFNVESLPELDRINQVAEQMGKIAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G ++ + G+ H + Sbjct: 138 ISLRINPDVDAKTHPYISTGLKANKFGIAMSQAEQAYQYAANQSHLKIMGIDCHIGSQLI 197 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + + + ++E I LGGG+ + P+ + + Q ++ Sbjct: 198 DLSPLVEACQRLLMLVDKLSAQGIELEHIDLGGGVGIVYHNEPIPNLNEYAQAVQNLLAG 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + LEPG ++V N TL T V + + KN VIVD+++ + L Sbjct: 258 RKLDLVLEPGRSLVGNAGTLLTRVEFVKQGEEKNFVIVDAAMNDLMRPALYQAYHHIENA 317 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 A + G C GD + + GD + Y + + +N Sbjct: 318 EKNKQPEILADIVGPICETGDFLAQNRQIA-AEAGDLLLVHSAGAYGASMASNYNTRCRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNNL 366 + + D + + + D L Sbjct: 377 AEVLVSGDKVREIRQRETLED-VMRL 401 >gi|294055999|ref|YP_003549657.1| carboxynorspermidine decarboxylase [Coraliomargarita akajimensis DSM 45221] gi|293615332|gb|ADE55487.1| carboxynorspermidine decarboxylase [Coraliomargarita akajimensis DSM 45221] Length = 404 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 130/380 (34%), Positives = 200/380 (52%), Gaps = 16/380 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++ +L N + + + +G K+LLALK FA F +++Y+ GTTSS L+E Sbjct: 26 PSPAYIVQLDRLNENCELLEQVAETSGAKVLLALKGFACHSTFPVISKYLAGTTSSGLHE 85 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK-FKDKAQKLHKKIGLR 121 +L E FG E H Y+ AYK E+ A+ +++FN+ QL + ++GLR Sbjct: 86 ALLATEHFGKEVHVYSPAYKASELQALRHFAHSLVFNSADQLASGVRQLTDGPRPQLGLR 145 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174 +NP S + L DP P SRLG + +++GL FH CE Sbjct: 146 VNPEYSEVETDLYDPCSPNSRLGTTRSALDSALQRLPSGLLHHLDGLHFHALCEQD-ADT 204 Query: 175 FSAMLKNIEKEFGHFI--TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 + E +FG + ++W++ GGG H T Y + C+ ++ F EKY V +YLE Sbjct: 205 LEHTAEAFESKFGDLLETLPLKWLNFGGGHHITRPGYDLARLCKVVQYFREKYEVDVYLE 264 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNL-VIVDSSVEAHVPDYLLYQESATIYP----NTGP 287 PGEA+ +T L TVLDI E +I DSS H+PD L I + P Sbjct: 265 PGEAVALHTGILVVTVLDILEAGGKQLIITDSSATCHMPDVLEMPYRPNILDAGEADEFP 324 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 YT + G SCLAGD+ G++ F++PV+IG R+ F D++ Y + + FNG+ +P I + + Sbjct: 325 YTYRIGGMSCLAGDVVGDYSFQQPVEIGQRLVFLDMSHYTMVKTTTFNGVPLPAICLHSE 384 Query: 348 DGTIKAIREFSYNDYYNNLS 367 ++ +R+F Y+DY + LS Sbjct: 385 ADGLQIVRKFHYSDYADRLS 404 >gi|254458657|ref|ZP_05072081.1| diaminopimelate decarboxylase [Campylobacterales bacterium GD 1] gi|207084423|gb|EDZ61711.1| diaminopimelate decarboxylase [Campylobacterales bacterium GD 1] Length = 402 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 120/384 (31%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP Y+ D + + L A+K + + G S+ E Sbjct: 11 KTPLYVYDLDYMSKQYQELKEAFRGRKSILAYAVKANSNLSVVKHFANLGSGADCVSIGE 70 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 V ++ K + D I + ++L + A++L+K + Sbjct: 71 VRRAFLAGIPAYKIIFSGVGKSDDEIREAIEKDILYINVESEAELFRVAIIAKELNKISR 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I +R+NP++ ++ G I + G+ FH + Sbjct: 131 ISIRVNPNIDPQTHPYISTGLHDNKFGVDINTAKRMYIFSKNSDSLDPVGVHFHIGSQLT 190 Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 + ++ ++ + ++++ +GGG+ T D D+ Q + + Sbjct: 191 NLEPIYESAVIVADLVRSLEAIDIELKFFDIGGGLGITYDDEATIKPYDYAQAILGTLKG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280 + + EPG + N T VL K V+VD ++ + L A Sbjct: 251 LDLTVICEPGRFLTANAGYFLTKVLYEKQNGAKKFVVVDGAMNDLLRPALYGAYHRIEAI 310 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + P T + G C +GD F + + + D + Y + +N Sbjct: 311 TDSASEPRTVDIVGPVCESGDFFAKDYLLPELNHNDLLVVHSAGAYGFGMGSNYNTRGRS 370 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + ++ D Sbjct: 371 AEVAVEKGQARLIRKRENFEDLIA 394 >gi|71279638|ref|YP_267983.1| diaminopimelate decarboxylase [Colwellia psychrerythraea 34H] gi|71145378|gb|AAZ25851.1| diaminopimelate decarboxylase [Colwellia psychrerythraea 34H] Length = 420 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 64/385 (16%), Positives = 124/385 (32%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP+Y + + + + A+K + + TL + G S+ Sbjct: 28 VQTPFYCYSSTAIETSFQAYKNAFSSQDALICYAVKANSNQAVLATLAKLGSGADVVSMG 87 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y+ K E + + +L A L+K Sbjct: 88 EIRRAITAGIPADKIVYSGVAKTEEEIHYALSLGIFQFNVESEPELELISKVATSLNKTA 147 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + RINP V + ++ G + + V G+ H + Sbjct: 148 AIAFRINPDVCAQTHAKISTGKAENKFGVPISKARIAYKRAASLPGIKVQGVDVHIGSQL 207 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223 S F + I E +I + +GGG+ T D + + +K Sbjct: 208 TSLAPFEEAYQRIAELVNELRADGHEISVVDVGGGLGITYLDEIIPSKQSYADLVKAQLG 267 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + +I +EPG +++ N L ++V+ I + +I+D+ + + + I Sbjct: 268 HLNCKIIIEPGRSLLGNAGILVSSVVFIKNGEERQFLILDAGMNDLIRPSMYEAYHQIIA 327 Query: 283 PNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 N G T V G C GD F + GD I+ Y + +N + Sbjct: 328 VNKGANELKTYDVVGPVCETGDTFAKARQVHKSDAGDLIAIMSSGAYGSVMSSSYNTRML 387 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + + SY + Sbjct: 388 APEVMVKGNEFAIVKKRPSYEEIIK 412 >gi|317153254|ref|YP_004121302.1| diaminopimelate decarboxylase [Desulfovibrio aespoeensis Aspo-2] gi|316943505|gb|ADU62556.1| diaminopimelate decarboxylase [Desulfovibrio aespoeensis Aspo-2] Length = 412 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 119/385 (30%), Gaps = 22/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L + ++K + + L G S E Sbjct: 26 GTPLYVYSAATLTRHFQAFDSAFDGLDHLTCYSVKANSNLSVLKLLAGLGAGMDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + + Y+ K + +V++L K + A + K K Sbjct: 86 LYRALKAGVSPDKIVYSGVGKRPSEIREALDAGILMFNIESVAELLKINEVAGEAGKVAK 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170 + RINP V ++ G ++ +E+ + G+ H + Sbjct: 146 VSFRINPDVDPQTHPYISTGMKKNKFGLDIENSLEAYRMCADLANIEPIGMDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEK 224 S F L + I+++ LGGG+ T + + LKE Sbjct: 206 SIAPFMEALDKLLDFYGRLKDMGIGIKYLDLGGGLGITYDEEEPPHPTEFGQALKEKLTG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG I N L T V+ +N +IVD+++ V L Sbjct: 266 VPLKVILEPGRVIAGNAGILVTEVVYTKSNPSRNFLIVDAAMNDLVRPSLYGSYHRIAEV 325 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T V G C +GD V G+ ++ Y + +N Sbjct: 326 TPKERDSLTYDVVGPICESGDFLARERALPAVNQGELLAVFSAGAYGFTMSSNYNSRPRA 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + D A + +Y D + Sbjct: 386 CELLVDGDTVTVARKRETYEDLIDK 410 >gi|88596732|ref|ZP_01099969.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 84-25] gi|218563114|ref|YP_002344893.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88191573|gb|EAQ95545.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 84-25] gi|112360820|emb|CAL35620.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926720|gb|ADC29072.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni IA3902] gi|315927463|gb|EFV06801.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930108|gb|EFV09235.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 305] Length = 382 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 139/376 (36%), Positives = 212/376 (56%), Gaps = 18/376 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EI + S I+FN+++Q +KF+ A+ +GLR Sbjct: 66 EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S A+LK Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTIEGLHFHALCE-ESAGALEAVLKV 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG +I Q++W++ GGG H T K Y V+ K FS+KY VQ+YLEPGEA+ T Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKES 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D Y I + FNGI +P + + N Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLN 362 Query: 347 VDGTIKAIREFSYNDY 362 ++ IREFSY DY Sbjct: 363 AKNELQMIREFSYKDY 378 >gi|313202258|ref|YP_004040916.1| diaminopimelate decarboxylase [Methylovorus sp. MP688] gi|312441574|gb|ADQ85680.1| diaminopimelate decarboxylase [Methylovorus sp. MP688] Length = 415 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 59/383 (15%), Positives = 115/383 (30%), Gaps = 23/383 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ +Q L + A+K + G+ + G S E+ Sbjct: 27 TPCYVYSRQALETAYRDFQQGFAGVDHLVCFAVKANPSLGVLSVFAKLGAGFDIVSGGEL 86 Query: 64 MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118 ++ K D A+ + + ++L + + A + Sbjct: 87 ARVLAAGGDASKVVFSGVGKTADEMRAALTAGIFCFNVESAAELERLNEVAGSMGKIAPV 146 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENKS 171 LR+NP+V ++ G + +V+G+ H + Sbjct: 147 SLRVNPNVDAKTHPYISTGLKNNKFGVAYEQSLALYQQAAAMPNIDVHGVDCHIGSQLTE 206 Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKY 225 F + + I I GGGI + + + + Sbjct: 207 LSPFLDAFDRVLALVDQLEAAGIAIRHIDAGGGIGICYNEETPPDFAAYAAAMLKKLGDR 266 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---ATI 281 V++ EPG A+V N L T V + KN IVD+++ + L Sbjct: 267 KVKLVFEPGRALVGNAGALLTRVEYLKHTEAKNFAIVDAAMNDLMRPALYDAYHQIAEVS 326 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T + G C +GD G +K GD ++ Y ++ + +N Sbjct: 327 PDATPKEIYEIVGPVCESGDFLGHDREL-GLKQGDLLAILSAGAYGMSMSSNYNTRPRAA 385 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + + + + + + Sbjct: 386 EVMVDGASYQLIRKRETIAELFA 408 >gi|90414778|ref|ZP_01222747.1| putative carboxynorspermidine decarboxylase [Photobacterium profundum 3TCK] gi|90324144|gb|EAS40726.1| putative carboxynorspermidine decarboxylase [Photobacterium profundum 3TCK] Length = 377 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 167/368 (45%), Positives = 240/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS Y Sbjct: 6 LKTPYFMIDESKLVANLEKAKLLKELSGVKLVLALKCFSTWGVFDLIKPYLDGTTSSGPY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ +QL ++ + +GLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVKEVAEICDKMIFNSQNQLAAYRHLVEGKAS-LGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R +SRLG + + N++G+MFH NCENK F +L + Sbjct: 125 LNPGVSYAGQDLANPARQYSRLGVQWDHIDAAVFDNLDGVMFHMNCENKDEDAFIGLLND 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I +FG + +++W+SLGGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISDKFGQHLDKLDWVSLGGGVFFTWPGYNIEKLAAALKTFSEKHGVQLYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 L TV+DI EN IVDS+ EAH D L+Y E A+I G + ++ SCLA Sbjct: 245 ADLVVTVVDIVENEMKTAIVDSATEAHRLDTLIYDEPASIAEASEQGEHQYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+K+G R+ D AGY + + NWFNG+ MP+I + +G I+ + EF Y Sbjct: 305 GDQFCVTQFDQPLKVGQRLHITDSAGYTMVKLNWFNGLKMPSIYCERANGEIEKLNEFGY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 DDFKRSLS 372 >gi|298675499|ref|YP_003727249.1| diaminopimelate decarboxylase [Methanohalobium evestigatum Z-7303] gi|298288487|gb|ADI74453.1| diaminopimelate decarboxylase [Methanohalobium evestigatum Z-7303] Length = 426 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 127/391 (32%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ ++Q++ +N L A K + L + G S E Sbjct: 30 GSPIYVTNEQRIRDNFRRYKKAF--PDADLFYAAKANGNLTILKILAEEGAGADVFSDGE 87 Query: 63 VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKI 118 + + +N D E+ + + ++ +LN A+ I Sbjct: 88 LYTALLAGIPRDKILFNGNSKSDRELLMAVQTGVRVSVDSFDELNTLSSIAKNEGKVVDI 147 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKS 171 R+NP VS S+ G + + + + ++ G+ H + Sbjct: 148 AFRVNPDVSPKTHPKISTGLKTSKFGIPHDEVVSAYKQALDKPGVNPVGIHCHIGSQILE 207 Query: 172 FLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY----------PVKDFCQRL 218 F + + + + E++ +G G+ + Sbjct: 208 VEPFVETVNKMMDLVEQISRLGVEFEFVDIGSGLGIPYEKNIEVPTPNDLADSIVPIFNE 267 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + +E + ++ LEPG +V ++ L T+V + K V +D+ + + Sbjct: 268 RCKAEGINPKLVLEPGRYLVGDSAILLTSVNTMKNAAKKFVGIDAGFNTMIRPVMYDAYH 327 Query: 279 ATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + N T + G C GDI ++ GD I+F DV GY + + + Sbjct: 328 HAVVANKADKNAEDTYTIVGPICETGDIMATDRELPEIEKGDVIAFLDVGGYGFSMSSQY 387 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 NG + N + +Y D N Sbjct: 388 NGRPRCAELLVNKGDVDIIRKAETYADLLAN 418 >gi|261401778|ref|ZP_05987903.1| diaminopimelate decarboxylase [Neisseria lactamica ATCC 23970] gi|269208091|gb|EEZ74546.1| diaminopimelate decarboxylase [Neisseria lactamica ATCC 23970] Length = 406 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIVGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLVEACERILILVDSLAAEGIVLEHLDLGGGVGIVYQDEKVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYNAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + G R + N Sbjct: 377 AEVLVDGGGYRLIRRRETLEQQMAN 401 >gi|157164320|ref|YP_001466459.1| diaminopimelate decarboxylase [Campylobacter concisus 13826] gi|112801631|gb|EAT98975.1| diaminopimelate decarboxylase [Campylobacter concisus 13826] Length = 407 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 66/383 (17%), Positives = 116/383 (30%), Gaps = 21/383 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP Y+ D + + + A+K + + L G S+ E Sbjct: 11 KTPLYVYDFNYIKERYEALKNAFYARKSLVCYAVKANSNLSVLKFLADLGAGFDCVSIGE 70 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 V ++ + +A+ + I + ++L + ++ A+ L+ K Sbjct: 71 VKRALLAGAKRYQIIFSGVGKSDEELKEALENEILLINVESFAELLRLEEIAKGLNLKAR 130 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 + R+NP V ++ G SE G+ FH + Sbjct: 131 ISIRVNPGVDAKTHPYISTGLNENKFGVDAVTAKKMYIHAKASEFLEPTGIHFHIGSQLT 190 Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 S K + + I++ +GGG+ D + D+ Q + + Sbjct: 191 SLSPIIDAAKIVSELLRELRALEIDIKFFDVGGGLGIIYNDEKEINLYDYAQGILGALKG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 V I EPG IV N +VL K VI D ++ + L Sbjct: 251 QDVTIVCEPGRFIVGNAGYFVASVLYEKFNGKKRFVITDGAMNDLIRPSLYGAHHKIFVD 310 Query: 284 NTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T V G C +GD + + GD I + Y + + +N N Sbjct: 311 GKDENLGTCDVVGPVCESGDFLAKDINLPECESGDVIVVKGAGAYGFSMSSNYNTRNRAA 370 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 R + D Sbjct: 371 EVCVLDGKDRLIRRRECFEDVVA 393 >gi|15606446|ref|NP_213826.1| diaminopimelate decarboxylase [Aquifex aeolicus VF5] gi|6225241|sp|O67262|DCDA_AQUAE RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|146386677|pdb|2P3E|A Chain A, Crystal Structure Of Aq1208 From Aquifex Aeolicus gi|146386678|pdb|2P3E|B Chain B, Crystal Structure Of Aq1208 From Aquifex Aeolicus gi|2983642|gb|AAC07209.1| diaminopimelate decarboxylase [Aquifex aeolicus VF5] Length = 420 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 64/384 (16%), Positives = 122/384 (31%), Gaps = 26/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + L + G S E Sbjct: 33 GTPLYVYSSNFIKERFEAYRKAF--PDALICYAVKANFNPHLVKLLGELGAGADIVSGGE 90 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + L E Y K + + + + +L+ + A KL KK Sbjct: 91 LYLAKKAGIPPERIVYAGVGKTEKELTDAVDSEILMFNVESRQELDVLNEIAGKLGKKAR 150 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 + R+NP V S+ G ++ + + G+ H + Sbjct: 151 IAIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEYEYASKLENLEIVGIHCHIGSQIL 210 Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSE 223 + ++ + + I+++ +GGG+ K +D LK+ E Sbjct: 211 DISPYREAVEKVVSLYESLTQKGFDIKYLDIGGGLGIKYKPEDKEPAPQDLADLLKDLLE 270 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG +I+ N L T V + + K+ +IVD+ + + + I Sbjct: 271 NVKAKIILEPGRSIMGNAGILITQVQFLKDKGSKHFIIVDAGMNDLIRPSIYNAYHHIIP 330 Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T A + G C GD + V+ G+ ++ Y + +N Sbjct: 331 VETKERKKVVADIVGPICETGDFLALDREIEEVQRGEYLAVLSAGAYGFAMSSHYNMRPR 390 Query: 340 PTIAVKNVDGTIKAIREFSYNDYY 363 + + +Y DY Sbjct: 391 AAEVLVENGSVKLIRKRENY-DYI 413 >gi|309378898|emb|CBX22485.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 406 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTKAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ KD + + Q +++ Sbjct: 198 DLSPLIEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDESVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T P TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKNISPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + G R + N Sbjct: 377 AEVLVDGGGYRLIRRRETLEQQMAN 401 >gi|294678687|ref|YP_003579302.1| diaminopimelate decarboxylase [Rhodobacter capsulatus SB 1003] gi|294477507|gb|ADE86895.1| diaminopimelate decarboxylase [Rhodobacter capsulatus SB 1003] Length = 422 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 121/393 (30%), Gaps = 27/393 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + A+K + + L G S Sbjct: 25 VGTPFYVYSAATLTRHFQLFDAALAGTDHLVCFAIKSNSNLAVLKLLGDLGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E G+ ++ +D A+ + +L + A L Sbjct: 85 EYRRAKAAGVPGDRIVFSGVGKTRDEIRLALTGGIRQFNVESEPELRAISEIATALGVTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 I LR+NP V + ++ G + + V G+ H + Sbjct: 145 PIALRVNPDVDAKTHEKIATGKSENKFGIPIAKARAVYAEAAKLPGIEVIGVDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKE 220 F A + + +I + LGGG+ + D+ + Sbjct: 205 TDLAPFEAAFTKVRELTLALREDGHKIRRLDLGGGLGIPYHQRSNEAPPLPTDYGAMITR 264 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESA 279 +I +EPG I N + T+V+ + E +N +IVD+++ V + Sbjct: 265 VLGDLGCEIEIEPGRLISGNAGLMVTSVIYLKEGEGRNFLIVDAAMNDLVRPSMYGAHHD 324 Query: 280 TIYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + P V G C GD F + P+ GD ++F Y + + Sbjct: 325 IVPVIEPAPGLAPQPFDVVGPVCETGDTFTKGRELPPMAEGDLVAFRSAGAYGAVMASEY 384 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 N + + + D + S+ + S Sbjct: 385 NSRPLIPEVLVSGDHFAVIRQRPSFEEMLARDS 417 >gi|300113121|ref|YP_003759696.1| diaminopimelate decarboxylase [Nitrosococcus watsonii C-113] gi|299539058|gb|ADJ27375.1| diaminopimelate decarboxylase [Nitrosococcus watsonii C-113] Length = 417 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 64/383 (16%), Positives = 124/383 (32%), Gaps = 24/383 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ + + + + ++ A+K + + D L + G S+ E+ Sbjct: 29 PCYIYSRAAIEHQWRAFDQAFEEHPHQICYAVKANSNLAVLDILARLGSGFDIVSVGELE 88 Query: 65 LGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIG 119 ++ K D A+ + ++L + + A KL + + Sbjct: 89 RVLAAGGDPGRIVFSGVGKRTDEMERALAVGIACFNVESEAELLRLNEIAGKLGQRAPVS 148 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-------FHNNCENKSF 172 LR+NP V ++ G + + + V H + S Sbjct: 149 LRVNPDVDARTHPYIATGLRDNKFGIEIDQALAVYARAVTLPHIDILGVDCHIGSQLTSL 208 Query: 173 LCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEKYS 226 F A L+ + + ++ I LGGG+ +D + + L+E Sbjct: 209 SPFLAALERVLALVDQLAKRGIEVRHIDLGGGLGIIYRDEAPPSPQQYAAALREKLAGRD 268 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 ++I++EPG AIV N L T + + + KN IVD+++ + L I Sbjct: 269 LEIWIEPGRAIVGNGGVLLTRIEYLKQAPQKNFAIVDAAMNDLLRPALYDAWQEIIPVTV 328 Query: 286 GPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C GD G+ ++ GD + Y + +N Sbjct: 329 DATREALLFDVVGPVCETGDFLGKQRQLA-IEAGDLLVVRAAGAYGFTMSSNYNSRPRAA 387 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + + + Y Sbjct: 388 EIMVDGAEAHLVRERETVESLYE 410 >gi|15603289|ref|NP_246363.1| hypothetical protein PM1424 [Pasteurella multocida subsp. multocida str. Pm70] gi|12721800|gb|AAK03508.1| LysA [Pasteurella multocida subsp. multocida str. Pm70] Length = 416 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 60/390 (15%), Positives = 114/390 (29%), Gaps = 27/390 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFNNALGDHPHLICFAVKSNPNIAILNIMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K A +V++L + A Sbjct: 86 LERVLAAGGEPSKIVFSGVAKTETEIARALEVGIRCFNVESVAELYRINQVAGEMGKTAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + + G+ H + Sbjct: 146 ISLRVNPDVDARTHPYISTGLKENKFGISVAEARNVYQLANQLPHIQITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ Q++ + LGGG+ +P + L + Sbjct: 206 ELQPFLDATDRLIVLMEQLKQDGIQLKHLDLGGGLGVPYTNENPPHPSEYASALLDKLKA 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282 + ++I LEPG AI N L T V + N IVD+ + + L I Sbjct: 266 YHELEIILEPGRAITANAGILVTKVEYLKHNEDRHFAIVDAGMNDMIRPALYQAYMNIIE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD ++ Y + + +N + Sbjct: 326 VDRTLTRDKAVYDVVGPICETSDFLGKQRELA-IAAGDYLAQRSAGAYGASMSSNYNSRS 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY--YNNL 366 + + D R + + L Sbjct: 385 RTAEVMVDGDQVHLIRRRETLEELWALERL 414 >gi|90416170|ref|ZP_01224102.1| diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2207] gi|90331895|gb|EAS47109.1| diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2207] Length = 421 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 62/385 (16%), Positives = 115/385 (29%), Gaps = 23/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ K + NN + + A+K + + TL + G S+ Sbjct: 28 LGTPCYVYSKAAISNNFLAYQSALVDKEHLICYAVKANSNIAVLQTLAELGAGFDIVSIG 87 Query: 62 EVMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ ++ A+ + ++L A Sbjct: 88 ELERVLRAGGDPAKVVFSGVAKTASEMQRALELGIHCFNVESEAELELLNSTASSCGATA 147 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCE- 168 + LR+NP V ++ G + + NV G+ H + Sbjct: 148 AVSLRVNPDVDAQTHPYISTGLKENKFGIDINLAAQVYQRAAQMAHINVVGVDCHIGSQL 207 Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223 F+ L + E ++ I +GGG+ D + + + Sbjct: 208 VDIAPFVSALERLLALVDELAGLGIALKHIDIGGGLGVRYDDEEPPTPQSYMSAILPLLM 267 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 S + LEPG +I N + T V + KN IVD+++ + L Sbjct: 268 DRSETLVLEPGRSITANAGVMLTQVQYLKSNGEKNFAIVDAAMNDMIRPALYQAWMDIQS 327 Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 +TG V G C GD + + GD + Y + +N Sbjct: 328 ISTGNSESAVYDVVGPVCETGDFLAKDRPLS-ICAGDYLCLMSAGAYGFVMSSNYNSRPR 386 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + + D + Sbjct: 387 APEVMVDGDQIHLVRQRETIEDLLS 411 >gi|332304598|ref|YP_004432449.1| diaminopimelate decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171927|gb|AEE21181.1| diaminopimelate decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 415 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 124/386 (32%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + + + A+K + G+ L + G S E Sbjct: 26 GTPCYVYSKATIERHWLAFDKAAGAHPHLVCYAVKANSNLGVLSVLAKLGSGFDIVSGGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKD--KAQKLHKK 117 ++ ++ K E A + N + ++L + A+ Sbjct: 86 LLRVIKAGGDPSKVVFSGVGKTPEEIALGLKHNIKCFNVESPAELERISQVAVAENKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I +R+NP V ++ G + + +E + G+ H + Sbjct: 146 ISIRVNPDVDAKTHPYISTGLKANKFGIEREQAVEVYRHAASLPNLEIKGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F L + E + + +GGG+ T +P + + Sbjct: 206 EIAPFVDALDKLLVLIDELAENGITLAHLDVGGGLGVTYKDETPPHPDEYTQAIAQRMQG 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + +Q+ EPG AI+ N L T V + + KN IVD+++ + L + I Sbjct: 266 REDLQLIFEPGRAIMANAGVLLTKVEFLKQGAEKNFAIVDAAMNDLIRPALYSAWQSIIP 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 +T V G C GD G+ ++ GD ++ Y + +N Sbjct: 326 LDTSLTRDSAVYDVVGPICETGDFIGKERELA-IEAGDYLAVRSAGAYGFVMASNYNSRC 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + I + D + Sbjct: 385 KAAEIMVDKENVIVVRERETLEDLWR 410 >gi|295108888|emb|CBL22841.1| carboxynorspermidine decarboxylase [Ruminococcus obeum A2-162] Length = 404 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 122/378 (32%), Positives = 196/378 (51%), Gaps = 14/378 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IKTP Y++D++ L+ N + + G K+LLA K F+ + + Y+ GT +S L+ Sbjct: 24 IKTPCYILDEKALIKNAKLLGEVSERTGCKMLLAQKAFSNYDCYRFFEPYLAGTEASGLF 83 Query: 62 EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E LG E+ G E H + Y+ E + +L D I+FN+ SQL +F +A++ K +GL Sbjct: 84 EARLGAEEMPGKEVHVFCAGYRADEFEELLQYADHIVFNSPSQLLRFGVRAKEAGKSVGL 143 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173 RINP S + DP SR+G E+ KN ++GL FH CE S Sbjct: 144 RINPECSTQEGHDIYDPCASGSRMGTTRAQWDEAFQKNPELLDLLDGLHFHTLCEQDSDD 203 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 L +++K FG ++++WI+ GGG H T Y ++ + ++ E++ +YLEP Sbjct: 204 -LETTLVSVKKHFGDLASRMKWINFGGGHHITRPGYDIERLERCIRMVQEEWKADVYLEP 262 Query: 234 GEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY---- 288 GEA N L T+VLD+ + IVD+S H+PD L + Sbjct: 263 GEAWALNAGFLLTSVLDVLKNGETQIAIVDASAACHMPDVLEMPYLPPLLGTDETEESGI 322 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 T + G +CL+GD+ G++ F + + GD + F D+A Y + N FNG+ +P I +++ D Sbjct: 323 TVRLGGPTCLSGDVIGDYKFRQLPEYGDLLMFGDMAIYTTCKNNTFNGMPLPDIWLRHGD 382 Query: 349 GTIKAIREFSYNDYYNNL 366 T++ + +F Y D+ L Sbjct: 383 NTMQQLTDFGYMDFKERL 400 >gi|153952120|ref|YP_001398814.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. doylei 269.97] gi|152939566|gb|ABS44307.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. doylei 269.97] Length = 382 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 137/376 (36%), Positives = 209/376 (55%), Gaps = 18/376 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EI + S I+FN+++Q +KF+ A+ +GLR Sbjct: 66 EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S +LK Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSAIEGLHFHALCE-ESADALETVLKA 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG +I Q++W++ GGG H T K Y V+ K FS+KY VQ+YLEPGEA+ T Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNTRILATRENEKISDLKEN 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + ++ G +CLAGD+ GE+ F K +KIGD+I F D Y I + FNGI +P + + + Sbjct: 303 EFAYLLTGNTCLAGDVMGEYAFNKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLD 362 Query: 347 VDGTIKAIREFSYNDY 362 ++ IREFSY DY Sbjct: 363 HKNELQMIREFSYKDY 378 >gi|57504779|ref|ZP_00370811.1| carboxynorspermidine decarboxylase [Campylobacter coli RM2228] gi|305432307|ref|ZP_07401470.1| carboxynorspermidine decarboxylase [Campylobacter coli JV20] gi|57019340|gb|EAL56041.1| carboxynorspermidine decarboxylase [Campylobacter coli RM2228] gi|304444655|gb|EFM37305.1| carboxynorspermidine decarboxylase [Campylobacter coli JV20] Length = 382 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 131/378 (34%), Positives = 207/378 (54%), Gaps = 18/378 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+E Sbjct: 7 QTPAYILEEDKLRRNCEILANVGEKSGAKVLLALKGFAFSGAMKVVGEYLKGCTCSGLWE 66 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E E H Y+ A+K+ E+ + I+FN++ Q +KFK + +GLR Sbjct: 67 AKFAKEYMDKEIHTYSPAFKEDEMSEIAHLSHHIVFNSLYQFDKFKSLC--ANNSLGLRC 124 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 N S++ L +P +SRLG KD ++ V GL FH CE +S A+LK Sbjct: 125 NLEFSFAPKELYNPCGKYSRLGILSKDLENFDLSGVEGLHFHALCE-ESADALEAVLKVF 183 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 E++FG +I Q++W++ GGG H T + Y ++ K FS+KY VQ+YLEPGEA+ + Sbjct: 184 EEKFGKWIKQMKWVNFGGGHHITKQGYDIQKIITLCKNFSDKYGVQVYLEPGEAVGWQSG 243 Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY---------------PNTGP 287 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 244 VLVASVVDIVENEKRIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDFKENE 303 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 + ++ G +CLAGD+ GE+ F++ +K GDR+ F D Y+I + FNGI +P + + N Sbjct: 304 FAYLLTGNTCLAGDVMGEYAFKEELKRGDRVVFLDQIHYSIVKNTTFNGIRLPNLMLLNS 363 Query: 348 DGTIKAIREFSYNDYYNN 365 ++ +REFSY DY Sbjct: 364 KNELEMVREFSYKDYALR 381 >gi|258624952|ref|ZP_05719879.1| carboxynorspermidine decarboxylase [Vibrio mimicus VM603] gi|258582808|gb|EEW07630.1| carboxynorspermidine decarboxylase [Vibrio mimicus VM603] Length = 387 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 165/368 (44%), Positives = 243/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 16 LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 76 EVKLGYETFGGETHAYSVGYSEDDVKEVVDICDKMIFNSQSQLAAYRHLVEDKA-SLGLR 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + E+ + ++G+MFH NCENK F ++L Sbjct: 135 INPGVSYAGQDLANPARKFSRLGVQADHIDENVFETIDGVMFHMNCENKDVDAFISLLDA 194 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG + +++W+SLGGG+ FT Y V LK FSE++ VQ+YLEPGEA++T T Sbjct: 195 ISERFGRHLDKLDWVSLGGGVFFTWPGYDVDKLGAALKAFSERHGVQLYLEPGEAVITKT 254 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 314 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+K+G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 315 GDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERQNGEIQKINQFGY 374 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 375 EDFKRTLS 382 >gi|254478073|ref|ZP_05091456.1| diaminopimelate decarboxylase [Carboxydibrachium pacificum DSM 12653] gi|214035935|gb|EEB76626.1| diaminopimelate decarboxylase [Carboxydibrachium pacificum DSM 12653] Length = 447 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 74/400 (18%), Positives = 134/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID+ L N K+ + ++ A K F M + Q G S Sbjct: 29 GTPLYVIDEDVLRANSRIFYNALKSHNPENEVVYAGKAFLTTAMCKIIQQEGLGLDVVSG 88 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ ++ I A+ S II + +L + A+KL+K+ Sbjct: 89 GELYTALKAGFPTEKIYFHGNNKSEEELIMALQSEVGRIIIDNWDELELLEILAKKLNKE 148 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 +R+ P + + S+ G K + S GL H Sbjct: 149 PAIYIRVTPGIEAHTHRYIMTGQIDSKFGFTISNGEAFKAVKRALTSGSLKFKGLHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + +K + + +E + LGGG + + + Sbjct: 209 SQILESTPYKIAVKIMLELLKEIKDTLGRGVEELDLGGGFGIPYVEDDSYQPVEEMLRDI 268 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + +I +EPG AI+ NT V + E + V VD + ++ Sbjct: 269 LEELEAQVSLLKVKLPKIIVEPGRAIIGNTGITLYKVGGVKEIPGVRKYVFVDGGMSDNI 328 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A N + G+ C +GD+ VK GD I+ + Sbjct: 329 RTALYGARYSAVIANRVYNGRLEKVTIAGKLCESGDVIIWDILLPEVKKGDIIAVLNTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + P + + + ++ +Y D N Sbjct: 389 YGYSMASNYNRLPKPAVILVSKGKAEIIVKRETYEDVIKN 428 >gi|20806736|ref|NP_621907.1| diaminopimelate decarboxylase [Thermoanaerobacter tengcongensis MB4] gi|20515193|gb|AAM23511.1| Diaminopimelate decarboxylase [Thermoanaerobacter tengcongensis MB4] Length = 447 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 74/400 (18%), Positives = 134/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID+ L N K+ + ++ A K F M + Q G S Sbjct: 29 GTPLYVIDEDVLRANSRIFYNALKSHNPENEVVYAGKAFLTTAMCKIIQQEGLGLDVVSG 88 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ ++ I A+ S II + +L + A+KL+K+ Sbjct: 89 GELYTALKAGFPTEKIYFHGNNKSEEELIMALQSEVGRIIIDNWDELELLEILAKKLNKE 148 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 +R+ P + + S+ G K + S GL H Sbjct: 149 PAIYIRVTPGIEAHTHRYIMTGQIDSKFGFTISNGEAFKAVKRALTSGSLKFKGLHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + +K + + +E + LGGG + + + Sbjct: 209 SQILESTPYKIAVKIMLELLKEIKDTLGRGVEELDLGGGFGIPYVEDDSYQPVEEMLRDI 268 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + +I +EPG AI+ NT V + E + V VD + ++ Sbjct: 269 LEELEAQVSLLKIKLPKIIVEPGRAIIGNTGITLYKVGGVKEIPGVRKYVFVDGGMSDNI 328 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A N + G+ C +GD+ VK GD I+ + Sbjct: 329 RTALYGARYSAVIANRVYNGRLEKVTIAGKLCESGDVIIWDILLPEVKKGDIIAVLNTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + P + + + ++ +Y D N Sbjct: 389 YGYSMASNYNRLPKPAVILVSKGKAEIIVKRETYEDVIKN 428 >gi|296314185|ref|ZP_06864126.1| diaminopimelate decarboxylase [Neisseria polysaccharea ATCC 43768] gi|296839164|gb|EFH23102.1| diaminopimelate decarboxylase [Neisseria polysaccharea ATCC 43768] Length = 406 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + DG R + N Sbjct: 377 AEVLVDGDGYKLIRRRETLEQQMAN 401 >gi|56695249|ref|YP_165597.1| diaminopimelate decarboxylase [Ruegeria pomeroyi DSS-3] gi|56676986|gb|AAV93652.1| diaminopimelate decarboxylase [Ruegeria pomeroyi DSS-3] Length = 421 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 124/390 (31%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P+Y+ LL + + A+K + + TL Q G S+ Sbjct: 25 VGSPFYVYSTATLLRHFQLFDEALDGTDHLICYAMKAASNQAILRTLAQAGAGMDVVSVG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E + G ++ K E A++ + ++ A +L K Sbjct: 85 EYLRARAAGVPGVRIVFSGVGKTAEEIRVALVGGIRQFNVESEPEMEVINAIALELGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I +R+NP V + ++ G + V G+ H + Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARASAVYAQAAALPGLEVVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + I + LGGG+ ++ +K Sbjct: 205 TDLAPFETAYRKVAELTERLRAEGHDIRRLDLGGGLGIPYTRSNEAPPLPMEYGALIKRT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N + + V+ + ++ +I+D+++ + + Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSKVIYVKSGEGRDFLILDAAMNDLIRPAMYDAHHDI 324 Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P + G C +GD F + P+ GD ++F Y + +N Sbjct: 325 VPVVEPEPGVEPQPYDIVGPVCESGDTFAKARMMPPLAAGDLVAFRSAGAYGAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D S+++ N Sbjct: 385 SRPLIPEVLVHGDQFAVIRPRPSFDEMINR 414 >gi|56420835|ref|YP_148153.1| diaminopimelate decarboxylase [Geobacillus kaustophilus HTA426] gi|56380677|dbj|BAD76585.1| diaminopimelate decarboxylase [Geobacillus kaustophilus HTA426] Length = 439 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 120/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + GV+ + A K F+A + + S Sbjct: 30 GTPLYIYDVALIRARARAFKEAFQRHGVRAQVAYASKAFSAVAIVQLAAEEGLSLDVVSG 89 Query: 61 YEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E ++ +D A+ I+ + +L ++ A Sbjct: 90 GELYTALAAGFPPERIHFHGNNKSRDELAMALEHGIGCIVADNFYELELIEELAASCGRT 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LR+ P V + S+ G E + + S + G+ H Sbjct: 150 VPVLLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEAFRRVMASAAFQLLGVHCHIG 209 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------- 215 + F + + + ++LGGG + Sbjct: 210 SQIFETAGFVLAAQKVFAKLAEWNKEHGFVPAVVNLGGGFGIRYTEEDDPIPVTAYVDCI 269 Query: 216 -QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K +E +I++EPG ++V + T T+ E + + ++ Sbjct: 270 VEEVKRQAEACRLPLPEIWIEPGRSLVGDAGTTIYTIGSRKEVPNVRTYIAVDGGMSDNI 329 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + G+ C +GD+ K GD ++ Sbjct: 330 RPALYGAKYEAALANRVFGEPTEVVSIAGKCCESGDMLIWDIALPEAKPGDYLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N + P + ++ +Y D Sbjct: 390 YGYSMANNYNRLPRPAVVFVENGDAQLVVKRETYEDLIQ 428 >gi|297787804|pdb|3N29|A Chain A, Crystal Structure Of Carboxynorspermidine Decarboxylase Comp Norspermidine From Campylobacter Jejuni gi|297787805|pdb|3N29|B Chain B, Crystal Structure Of Carboxynorspermidine Decarboxylase Comp Norspermidine From Campylobacter Jejuni Length = 418 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 138/376 (36%), Positives = 210/376 (55%), Gaps = 18/376 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 42 IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 101 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EI + S I+FN+++Q +KF+ K +GLR Sbjct: 102 EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSK--TQKNSLGLR 159 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S A+LK Sbjct: 160 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKV 218 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG +I Q++W++ GGG H T K Y V+ K FS+KY VQ+YLEPGEA+ T Sbjct: 219 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 278 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 279 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 338 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + ++ G +CLAGD+ GE+ F+K +KIGD+I F D Y I + FNGI +P + + + Sbjct: 339 EFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLD 398 Query: 347 VDGTIKAIREFSYNDY 362 ++ IREFSY DY Sbjct: 399 HKNELQMIREFSYKDY 414 >gi|109900371|ref|YP_663626.1| diaminopimelate decarboxylase [Pseudoalteromonas atlantica T6c] gi|109702652|gb|ABG42572.1| diaminopimelate decarboxylase [Pseudoalteromonas atlantica T6c] Length = 415 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 123/386 (31%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + + + A+K + G+ L + G S E Sbjct: 26 GTPCYVYSKATIERHWLAFDKAAGAHPHLVCYAVKANSNLGVLSVLAKLGSGFDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKD--KAQKLHKK 117 ++ ++ K E A + N + ++L + A+ Sbjct: 86 LLRVLKAGGDPTKVVFSGVGKTPEEIALGLQHNIKCFNVESPAELERISQVAVAENKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I +R+NP V ++ G + + +E + G+ H + Sbjct: 146 ISIRVNPDVDAKTHPYISTGLKANKFGIEREQAVEVYRHAASLPNLEIKGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F L + E + + +GGG+ T +P + + Sbjct: 206 EIAPFVDALDKLLVLIDELAENGITLAHLDVGGGLGVTYKDETPPHPDEYTQAIAQRMQG 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + +Q+ EPG AI+ N L T V + + KN IVD+++ + L + I Sbjct: 266 REDLQLIFEPGRAIMANAGVLLTKVEFLKQGAEKNFAIVDAAMNDLIRPALYSAWQSIIP 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 +T V G C GD G+ + GD ++ Y + +N Sbjct: 326 LDTSLTRDSAVYDVVGPICETGDFIGKERELA-IDAGDYLAVRSAGAYGFVMASNYNSRC 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + + D + Sbjct: 385 KAAEIMVDKDQVMVVRERETLEDLWR 410 >gi|254226118|ref|ZP_04919715.1| carboxynorspermidine decarboxylase [Vibrio cholerae V51] gi|125621353|gb|EAZ49690.1| carboxynorspermidine decarboxylase [Vibrio cholerae V51] Length = 387 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 167/368 (45%), Positives = 246/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 16 LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 76 EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKV-SLGLR 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + ES ++NG+MFH NCENK F +L Sbjct: 135 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 194 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V+ LK F+E+++VQ+YLEPGEAI+T T Sbjct: 195 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 254 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 314 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+++G ++ D AGY + + NWFNG+ MP++ + +G I+ I +FSY Sbjct: 315 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFSY 374 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 375 EDFKRTLS 382 >gi|254000301|ref|YP_003052364.1| diaminopimelate decarboxylase [Methylovorus sp. SIP3-4] gi|253986980|gb|ACT51837.1| diaminopimelate decarboxylase [Methylovorus sp. SIP3-4] Length = 415 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 60/383 (15%), Positives = 116/383 (30%), Gaps = 23/383 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ +Q L + A+K + G+ + G S E+ Sbjct: 27 TPCYVYSRQALETAYRDFQQGFAGVDHLVCFAVKANPSLGVLSVFAKLGAGFDIVSGGEL 86 Query: 64 MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118 ++ K D A+ + + ++L + + A + Sbjct: 87 ARVLAAGGDASKVVFSGVGKTADEMRAALTAGIFCFNVESAAELERLNEVAGSMGKIAPV 146 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENKS 171 LR+NP+V ++ G + +V+G+ H + Sbjct: 147 SLRVNPNVDAKTHPYISTGLKNNKFGVAYEQSLALYQQAAAMPNIDVHGVDCHIGSQLTE 206 Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKY 225 F + + I I GGGI + + + + Sbjct: 207 LSPFLDAFDRVLALVDQLEAAGIAIRHIDAGGGIGICYNEETPPDFAAYAAAMLKKLGDR 266 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---ATI 281 V++ EPG A+V N L T V + KN IVD+++ + L Sbjct: 267 KVKLVFEPGRALVGNAGALLTRVEYLKHTEAKNFAIVDAAMNDLMRPALYDAYHQIAEVS 326 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T + G C +GD G +K GD ++ Y ++ + +N Sbjct: 327 PDATPKEIYEIVGPVCESGDFLGHDREL-GLKQGDLLAILSAGAYGMSMSSNYNTRPRAA 385 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + + + S ++ + Sbjct: 386 EVMVDGASYQLIRKRESISELFA 408 >gi|198284947|ref|YP_002221268.1| diaminopimelate decarboxylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666233|ref|YP_002427632.1| diaminopimelate decarboxylase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249468|gb|ACH85061.1| diaminopimelate decarboxylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518446|gb|ACK79032.1| diaminopimelate decarboxylase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 419 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 56/381 (14%), Positives = 109/381 (28%), Gaps = 24/381 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + ++ A+K + G+ + G S E Sbjct: 26 GTPCYVYSEAALRERYHSFSAALGD-NTRVCYAVKANSNLGILRIFAEMGAGFDIVSGGE 84 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKA--QKLHKK 117 + T ++ K + ++L + D A Sbjct: 85 LERVLRAGGDAGTIVFSGVGKSSVEIRAALGAGIFCLNVESAAELWRIADIAADMGKRAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN- 169 + LR+NP V S+ G ++ + G+ H + Sbjct: 145 VALRVNPDVDPGTHRYIATGLKESKFGIPMDQARHLYLQAAQHPALELKGIACHIGSQLL 204 Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224 + ++ + E ++ + LGGG+ D L + + Sbjct: 205 DLTPLGEAAGRVRALYDELAAHGIALQHLDLGGGVGIRYHDEIPPSPADYAWTLDQALQG 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES---AT 280 +V+ +E G A+ N L T V + +N V D+++ + L Sbjct: 265 VAVRRVVELGRALAGNAGVLLTKVEYLKDNGGKQFCVVDAAMNDLLRPALYGAWHDILPL 324 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 V G C +GD K GD ++ Y + +N P Sbjct: 325 HQSVGTGPAMDVVGPVCESGDFLARDRPLA-AKAGDLLAVMSAGAYGFAMSSNYNSRPRP 383 Query: 341 TIAVKNVDGTIKAIREFSYND 361 + + R + D Sbjct: 384 PEVLISGHQHRLIRRRETLAD 404 >gi|152977874|ref|YP_001343503.1| diaminopimelate decarboxylase [Actinobacillus succinogenes 130Z] gi|150839597|gb|ABR73568.1| diaminopimelate decarboxylase [Actinobacillus succinogenes 130Z] Length = 415 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 71/383 (18%), Positives = 122/383 (31%), Gaps = 24/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L + + + A+K + + T+ + G S E Sbjct: 26 GTPLYVYSKATLERHWHAFDDAFGDYPHLICFAVKSNSNIAVLQTMARLGSGFDIVSQGE 85 Query: 63 VMLGHE--KFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G+ VA + E A+ ++ +L + + A KL K Sbjct: 86 LERVLAAGGDPGKVVFSGVAKTETEITRALEVGIRCFNVESIPELYRINEVAGKLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G E V G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDQAREVYRRAAELPHIAVTGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + ++ Q++ + LGGG+ T + + L + + Sbjct: 206 ELQPFLDAADRLVVLMEQLKQDGVQLKHLDLGGGLGVTYSNETPPHPTDYATALLQKLQA 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283 Y+++I LEPG AI N L T V + N + IVD+ + + L I Sbjct: 266 YNLEIILEPGRAICANAGVLVTKVEYLKSNETHNFAIVDAGMNDMIRPALYEAYMNIIEA 325 Query: 284 ----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C D G+ + GD + Y + + +N Sbjct: 326 DRTLPRAKAVYDVVGPICETSDFLGKKRELA-IAAGDYLVQRSAGAYGASMSSNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 + + D R SY + Sbjct: 385 TAEVMVDGDKAFLIRRRESYQNL 407 >gi|254461301|ref|ZP_05074717.1| diaminopimelate decarboxylase [Rhodobacterales bacterium HTCC2083] gi|206677890|gb|EDZ42377.1| diaminopimelate decarboxylase [Rhodobacteraceae bacterium HTCC2083] Length = 433 Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats. Identities = 55/390 (14%), Positives = 122/390 (31%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + A+K + + TL G S Sbjct: 37 VGTPFYVYSTATLERHFKLFDDALEGTEHLVCYAMKAASNQAILKTLAALGAGMDVVSGG 96 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E GE ++ K A+ + ++ + A L Sbjct: 97 EYARAKAAGVPGERIVFSGIGKTRAEVHQALTGGIRQFNVESEPEMQVISEIATALDVIA 156 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENK- 170 I +R+NP V + ++ G + + + + + + ++ Sbjct: 157 PITIRVNPDVDAKTHAKIATGKSENKFGIPISRAREVYALAASLPGLKVIGIDVHIGSQL 216 Query: 171 ----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-----DYPVKDFCQRLKEF 221 F + + ++ +I + LGGG+ D+ +K+ Sbjct: 217 IDLAPFEAAYNKVAELTEQLRADGHEISRLDLGGGLGIPYARSNEAPPSPTDYGALIKKC 276 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N L + V+ + + +I+D ++ + + Sbjct: 277 VGHLGCEIEIEPGRLIAGNAGLLVSEVIYVKSGEDREFLIIDGAMNDLIRPAMYDAHHDI 336 Query: 281 IYPNTG-----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P + G C +GD F + P+K G+ ++F Y + +N Sbjct: 337 VPVVESEVGVLPTPYDIVGPVCESGDTFAKGRQMPPLKAGNLVAFRSAGAYGAVMASEYN 396 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + D ++++ N Sbjct: 397 TRPLIPEVLVKGDQFAVIRPRPTFDEMINR 426 >gi|71065473|ref|YP_264200.1| pyridoxal-dependent decarboxylase [Psychrobacter arcticus 273-4] gi|71038458|gb|AAZ18766.1| probable pyridoxal-dependent decarboxylase [Psychrobacter arcticus 273-4] Length = 417 Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats. Identities = 195/399 (48%), Positives = 253/399 (63%), Gaps = 34/399 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TPYYL+D+ ++ N+ + + +G K LLALKCFA WG+FD + Y+ GTTSSSL E Sbjct: 19 PTPYYLLDEAAIVANMQIIARLCELSGAKALLALKCFATWGVFDVMEPYLHGTTSSSLNE 78 Query: 63 VMLGHEKFG----------GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 V LG+E FG ETHAY+VAY E+ VL+ D IIFN++SQLN FK++A Sbjct: 79 VRLGYESFGNNSDASSQDKKETHAYSVAYSADEMPEVLNYADKIIFNSISQLNAFKEQAA 138 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 + +GLR+NP S S FI+ADP RPFSRLGE KDKI + + +++G+M HNNCEN SF Sbjct: 139 AKNIPVGLRLNPKTSNSSFIIADPARPFSRLGEHDKDKIAAVLSDISGVMIHNNCENDSF 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 FS L +IE FG + Q+EW+SLGGGIHF DYP++ RLK FSE Y VQ+YLE Sbjct: 199 EAFSESLADIETRFGDVLQQLEWVSLGGGIHFIAPDYPLEKLADRLKGFSENYGVQVYLE 258 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----------- 281 PGEA + TL T+VLD N KNL +VDSS+EAH+ D L+Y+ESA I Sbjct: 259 PGEASIHGAGTLVTSVLDTMHNEKNLAVVDSSIEAHMLDLLIYRESAPIAAINSDLINIA 318 Query: 282 -------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 ++ GRSCLAGDIFGE+ +KIGD ++F + AGY + Sbjct: 319 SLDIDPTNIAPISENAKSADNTIIYGRSCLAGDIFGEYALPNNLKIGDTVTFGNAAGYTM 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 +KNWFNG+NMP I ++ +DG+I REF Y DY +LS Sbjct: 379 VKKNWFNGVNMPAIVIRRLDGSIDIQREFDYQDYKASLS 417 >gi|144899443|emb|CAM76307.1| Diaminopimelate decarboxylase [Magnetospirillum gryphiswaldense MSR-1] Length = 421 Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats. Identities = 67/389 (17%), Positives = 116/389 (29%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP+Y L+ + AG ++ ALK + T Q G S Sbjct: 25 VGTPFYCYSTATLVRHYTVFTQALAEAGLDAQVCFALKANPNVAVVRTFAQLGAGADVVS 84 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKL 114 E+ + ++ K I + +L A + + Sbjct: 85 EGELRRALAAGVPVDRIVFSGVGKTEAELTFAVAKGIMQINVESEPELEALSKIAAARGI 144 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC 167 I LR+NP V + ++ G + E K V G+ H Sbjct: 145 RMPIALRVNPDVDAGTHAKITTGKKENKFGIEWTRAHEVYNKARALPGIEVVGIACHIGS 204 Query: 168 ENKSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEF 221 + F +++ I + LGGG+ + + + +K+ Sbjct: 205 QLTDVEPFRQAFLRVRDLVAMLRADGFNIRRLDLGGGLGIPYESEEPPHPAVYAKAIKDT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280 +I LEPG +V N L + V+ + E I D+++ + L Sbjct: 265 LGDLGCKIVLEPGRLLVGNAGILVSRVVYVKEGATRTFLIADAAMNDLMRPALYEAHHTI 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 V G C GD F + P+K GD I F Y + +N Sbjct: 325 EPVIEPAKDAPRLPVDVVGPVCETGDTFAKQRSLPPIKAGDLIVFRTAGAYGAAMSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D S++D Sbjct: 385 TRPLVPEVLVKDDSFAVVRARPSFDDMLA 413 >gi|281422911|ref|ZP_06253910.1| carboxynorspermidine decarboxylase [Prevotella copri DSM 18205] gi|281403041|gb|EFB33721.1| carboxynorspermidine decarboxylase [Prevotella copri DSM 18205] Length = 391 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 115/378 (30%), Positives = 201/378 (53%), Gaps = 17/378 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++++L +NL + + A ++++LA K +A W F +Y+ TT+SSL E Sbjct: 14 PIYVLEEERLRHNLSLIRSVAERADMEIILAFKAYALWKTFPIFREYISSTTASSLSEAK 73 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--GLRI 122 L + +FG + H ++ AY D EID + + FN+++Q ++ ++A++ + I GLR+ Sbjct: 74 LAYHEFGSKAHTFSPAYTDYEIDEIAQCSSHLTFNSLTQYERYHERARRANSDIRLGLRV 133 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S +L +P P +R G ++ ++ G H +CE+ F L +I Sbjct: 134 NPEYSEVGTLLYNPCAPGTRFGVSADKLPQTLPSDIEGFHCHCHCESG-ADVFERTLAHI 192 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E++F + Q++WI+ GGG T KDY V+ +K F ++Y +I +EPG A T Sbjct: 193 EEKFSPWFPQLKWINFGGGHLMTRKDYDVEHLINIIKGFHQRYPHLKIIMEPGSAFGWQT 252 Query: 242 TTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP------------NTGPY 288 L T V+D+ E+ I+++S H+PD L + G + Sbjct: 253 GPLVTQVVDVVEDKGIRTAIINASFTCHMPDCLEMPYMPAVRNAETLEVDDPTKAPEGAH 312 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 + G SCL+GD G + F+ ++IG+ + FED+ Y + N FNGI P+I + ++D Sbjct: 313 IYRIGGNSCLSGDFMGFWKFDHELQIGENVIFEDMLHYTTVKTNTFNGITHPSIGIVHLD 372 Query: 349 GTIKAIREFSYNDYYNNL 366 G ++ +R+FSY DY + + Sbjct: 373 GKLETLRDFSYEDYRSRM 390 >gi|297579203|ref|ZP_06941131.1| carboxynorspermidine decarboxylase [Vibrio cholerae RC385] gi|297536797|gb|EFH75630.1| carboxynorspermidine decarboxylase [Vibrio cholerae RC385] Length = 387 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 165/368 (44%), Positives = 244/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 16 LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 76 EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKVS-LGLR 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + E ++NG+MFH NCENK F +L Sbjct: 135 INPGVSYAGQDLANPARQFSRLGVQADHIDEIVFDSINGVMFHMNCENKDVDAFIGLLDA 194 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V+ LK F+E+++VQ+YLEPGEAI+T T Sbjct: 195 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 254 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 314 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+++G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 315 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 374 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 375 EDFKRTLS 382 >gi|86152555|ref|ZP_01070760.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843440|gb|EAQ60650.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 382 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 138/376 (36%), Positives = 210/376 (55%), Gaps = 18/376 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EI + S I+FN+++Q +KF+ K +GLR Sbjct: 66 EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSK--TQKNSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S A+LK Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKV 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG +I Q++W++ GGG H T K Y V+ K FS+KY VQ+YLEPGEA+ T Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + ++ G +CLAGD+ GE+ F+K +KIGD+I F D Y I + FNGI +P + + + Sbjct: 303 EFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLD 362 Query: 347 VDGTIKAIREFSYNDY 362 ++ IREFSY DY Sbjct: 363 HKNELQMIREFSYKDY 378 >gi|114330425|ref|YP_746647.1| diaminopimelate decarboxylase [Nitrosomonas eutropha C91] gi|114307439|gb|ABI58682.1| diaminopimelate decarboxylase [Nitrosomonas eutropha C91] Length = 417 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 114/384 (29%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + + + L + G S E Sbjct: 29 GTPCYVYSSAAIRTAYQSFDRAFGQRNHLICYAVKANSNLAVLNLLARLGSGFDIVSGGE 88 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K E A+ +N + +L + A ++ K Sbjct: 89 LQRVLKAGGDLQKTVFSGVGKTFEEIRIALAANIFCFNVESEMELIALNEIAGQMGKIAP 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V + ++ G + V+GL H + Sbjct: 149 VSLRVNPDVDANTHPYISTGMKENKFGIPAAEAERIYAIAQQLPYIRVSGLDCHIGSQLT 208 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS---EK 224 F + IE + LGGG+ + +K E Sbjct: 209 EIAPFIEAAHKMLDLLARLQATGISIEHLDLGGGLGVRYDLEIPPTIEEYVKALCAATEN 268 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 Y Q+ +EPG ++V N L T V + + + + LYQ +I P Sbjct: 269 YPQQLLIEPGRSMVGNAGLLLTRVHYLKHAPHRNFAIVDAAMNDMLRPALYQAYHSILPI 328 Query: 285 TGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD G ++ D ++ Y ++ + +N Sbjct: 329 AKRTGETKIYQIVGPVCETGDFLGHDRNL-TLESNDLLAVMSAGAYGMSMSSNYNTRPRA 387 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + D Y Sbjct: 388 VEVMVDGSSVHLIRARETIEDLYA 411 >gi|110635369|ref|YP_675577.1| diaminopimelate decarboxylase [Mesorhizobium sp. BNC1] gi|110286353|gb|ABG64412.1| diaminopimelate decarboxylase [Chelativorans sp. BNC1] Length = 421 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 120/389 (30%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL G S Sbjct: 25 VGTPFYCYSTATLERHYRVFSEALSGLDALVCYAMKANSNQAVLKTLGNLGAGADVVSQG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K + A+ + ++ +L + +A + Sbjct: 85 ELRRALAAGIPANKILFSGVGKTGEEMDFALSAGILCFNVESLPELELLSARARAIGVKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G KD + + V G+ H + Sbjct: 145 PVSLRINPDVDAKTHKKISTGKSENKFGIPWKDARAAYARAASLPGLEVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + + I+ + LGGG+ ++ + + ++ Sbjct: 205 TELQPFDQAFALLTELTETLRADGHAIKHVDLGGGLGVPYREDNEPPPLPDAYAEVVRRH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + +++ EPG IV N L + VL + E KN +I+D+++ + L Sbjct: 265 VTRLGLKVIFEPGRLIVGNAGVLISRVLYLKEGEGKNFLIIDAAMNDLIRPTLYDAYHTI 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 A V G C GD ++ GD I+ Y + +N Sbjct: 325 RPVAEPAADAPHLKADVVGPVCETGDFLALDRDLPRMEPGDLIAVGTAGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + N D +Y Sbjct: 385 SRLLVPEVLVNGDRFHIVRPRPTYEQLIA 413 >gi|187930324|ref|YP_001900811.1| diaminopimelate decarboxylase [Ralstonia pickettii 12J] gi|187727214|gb|ACD28379.1| diaminopimelate decarboxylase [Ralstonia pickettii 12J] Length = 423 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 114/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L N + + A+K + + Q G S E Sbjct: 31 GTPTYVYSRAALTANYRAYAAACEGRNAHVQYAMKANSNLAVLQVFAQLGAGFDIVSAGE 90 Query: 63 VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K D A+ ++ +L++ D A Sbjct: 91 LKRVLRAGAPASKVVFSGVGKSADEMRFALEVGVACFNVESIPELHRLNDVAASMGKVAP 150 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LRINP V ++ G + + +V G+ H + Sbjct: 151 VSLRINPDVDAKTHPYISTGLKGNKFGVAFDEVLPTYRAAAAMPNLHVVGIDCHIGSQIT 210 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + L ++ + + I +GGG+ T D D + ++ Sbjct: 211 EVSPYLDALDKVLDVVTQLDAEGIHLSHIDVGGGLGITYTDETPPDITAFARTLLDRVEQ 270 Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 + + EPG ++V N L T V + + D+++ + Sbjct: 271 RGFGDRTVLFEPGRSLVGNAGLLLTRVEYLKPGASKNFCIVDAAMNDLARPAMYEAYHHI 330 Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + P V G C +GD G V+ GD ++ Y + +N Sbjct: 331 VPVRESQSAPVVYDVVGPVCESGDWLGRDRSLA-VQPGDVLAILSAGAYGFTMSSNYNTR 389 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D A + D Sbjct: 390 NRAAEVIVDGDKIHLARERECFEDLIR 416 >gi|220933233|ref|YP_002512132.1| diaminopimelate decarboxylase [Thioalkalivibrio sp. HL-EbGR7] gi|219994543|gb|ACL71145.1| diaminopimelate decarboxylase [Thioalkalivibrio sp. HL-EbGR7] Length = 414 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 60/385 (15%), Positives = 117/385 (30%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K ++ + + L + G S+ E Sbjct: 26 GTPCYVYSRATLERHWRAFDTALGDHPHLICYAVKANSSLAVLNVLARLGSGFDIVSVGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K D A+ + ++L + A +L Sbjct: 86 LERVLRAGGEASRVVFSGVGKRADEMRRALEVGIRCFNVESEAELARLNGVAGELGVEAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170 + +R+NP V ++ G + + V G+ H + Sbjct: 146 VSIRVNPDVDARTHPYISTGLKENKFGVDIRVAPALYRQAADMAHIRVVGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 F LK + + ++ + LGGG+ +D + + L E Sbjct: 206 GLSPFVDALKRVLELARTLEADGIGLDHLDLGGGLGIRYRDEEPPLPDAYARALFEGLAD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283 +I LEPG AI N L T V + +VD+++ + L + Sbjct: 266 TRYEILLEPGRAIAGNAGVLLTRVEYLKHTEHKDFAVVDAAMNDLIRPALYGAWQEIVPV 325 Query: 284 NT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T V G C GD G+ + D ++ Y + +N Sbjct: 326 APRLGESRTYDVVGPVCETGDFLGKERALV-LAEDDLLAVRSAGAYGFTMSSNYNTRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + R S + Sbjct: 385 AEVMVDGEQVHLVNRRESLEELMAR 409 >gi|153826147|ref|ZP_01978814.1| carboxynorspermidine decarboxylase [Vibrio cholerae MZO-2] gi|149740088|gb|EDM54253.1| carboxynorspermidine decarboxylase [Vibrio cholerae MZO-2] Length = 387 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 166/368 (45%), Positives = 245/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 16 LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 76 EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKV-SLGLR 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + ES ++NG+MFH NCENK F +L Sbjct: 135 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 194 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V+ LK F+E+++VQ+YLEPGEAI+T T Sbjct: 195 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 254 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 314 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+++G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 315 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 374 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 375 EDFKRTLS 382 >gi|241762096|ref|ZP_04760179.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373346|gb|EER62946.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 421 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 69/388 (17%), Positives = 132/388 (34%), Gaps = 26/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y+ L AG + A+K + + + + G S Sbjct: 26 GTPCYVYSHSYLTERARRFTKALDGAGKGKALVAFAVKANPSQAILASFAKEGLGADVVS 85 Query: 60 LYEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ H E ++ K + A+ +VS++ + A L K Sbjct: 86 AGEIRRAVHAGIPPERIVFSGVGKTAEEMRYALEIGIGQFNIESVSEIEMLAEVAASLGK 145 Query: 117 K--IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167 K + LRINP V + ++ G +D + + K + G+ H Sbjct: 146 KAAVALRINPDVDPHTHAKIATGKADTKFGIAAEDALSAYEKLASYPSLKIQGIASHIGS 205 Query: 168 ENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-----QRLK 219 + F + + I IE LGGG+ KD + + +K Sbjct: 206 QITDLAPFEAAAERIYEIITALEKAGHAIETADLGGGLGVRYKDDQPEPPSIEAYGEMIK 265 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES 278 ++ ++ ++ EPG +++ N L + V+ + E+ ++ D+++ V L Sbjct: 266 RVTKGWNCRLIFEPGRSLIANAGILLSKVIRVKESKTARFVILDAAMNDLVRPTLYDAYH 325 Query: 279 AT--IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + P+ Y A + G C GDIF VK D ++ Y + +N Sbjct: 326 EIKAVTPSAQAYQADIVGPVCETGDIFARNRSIPAVKPDDLVAIMSAGAYGATMASAYNS 385 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + + + S D Sbjct: 386 RPLVAEVMVSGNKSALIRKRQSVEDLMR 413 >gi|153830885|ref|ZP_01983552.1| carboxynorspermidine decarboxylase [Vibrio cholerae 623-39] gi|148873636|gb|EDL71771.1| carboxynorspermidine decarboxylase [Vibrio cholerae 623-39] Length = 387 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 166/368 (45%), Positives = 245/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPY++ID+ KL+ NL+ A Y+++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 16 LRTPYFMIDEAKLIANLEIAKYLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 76 EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKAS-LGLR 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + ES ++NG+MFH NCENK F +L Sbjct: 135 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 194 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V+ LK F+E+++VQ+YLEPGEAI+T T Sbjct: 195 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 254 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 314 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+++G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 315 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 374 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 375 EDFKRTLS 382 >gi|85705851|ref|ZP_01036947.1| diaminopimelate decarboxylase [Roseovarius sp. 217] gi|85669439|gb|EAQ24304.1| diaminopimelate decarboxylase [Roseovarius sp. 217] Length = 421 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 56/390 (14%), Positives = 120/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHFRLFDEALTGMDHLVCYAMKAASNQAILKTLARLGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E GE ++ ++ A++ + ++ A +L Sbjct: 85 EYARAKAAGVPGERIVFSGVGKTREEMRLALMGGIRQFNVESEPEMGVLSAVAVELGLRA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 I +R+NP V + ++ G E + V G+ H + Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYAQAAALPGLEVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + I + LGGG+ ++ ++E Sbjct: 205 TDLAPFRLAYEKVAELTQVLREDGHDIRRLDLGGGLGIPYTRSNEAPPLPTEYGALIREV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N L + V+ + ++ +I+D+++ + + Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGILVSRVIYLKSGEGRDFLILDAAMNDLIRPAMYDAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C +GD F + P+ GD ++F Y + +N Sbjct: 325 VPLVEPAPGVEQQPYDVVGPVCESGDTFAKGRMLPPLAEGDLVAFRSAGAYGAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + ++++ N Sbjct: 385 TRPLVPEVLVHGRDFAVIRGRPTFDEMINR 414 >gi|153873428|ref|ZP_02002015.1| diaminopimelate decarboxylase [Beggiatoa sp. PS] gi|152070106|gb|EDN67985.1| diaminopimelate decarboxylase [Beggiatoa sp. PS] Length = 414 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 59/385 (15%), Positives = 112/385 (29%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + KN + A+K + + L + G S E Sbjct: 26 GTPCYVYSRATLERHWHAFDNALKNHRHLICYAVKANSNLTVLSVLARLGSGFDIVSGGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K A+ + ++L + A Sbjct: 86 LERVLRAGGDPNKIVFSGVGKTVIEMRRALEVGIRCFNVESEAELLRLNQVAGDMGKMAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167 + LR+NP V ++ G I+ + G+ H Sbjct: 146 VSLRVNPDVDAKTHPYISTGLKENKFGIDINSAIDVYKKAKALPHLQIIGIDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224 + SF+ + + ++ I LGGG+ + ++ + Sbjct: 206 QTTSFVDALQRVIVLVNTLRDKNIHLQHIDLGGGLGVRYHTETPPEPENYVQALTQVLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQES----A 279 +I LEPG AI N L T V + K+ IVD+++ + L Sbjct: 266 TPYEIILEPGRAIAANAGVLLTKVEYLKHTADKHFAIVDAAMNDLLRPALYTAWQDILPV 325 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 N + G C GD G+ + D ++ Y + +N Sbjct: 326 QPRKNETEQNYDIVGPICETGDFLGKNRALA-LHESDVLAVRTSGAYGFTMSSNYNTRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + +D Sbjct: 385 VAELMVDGEQVAVVRRRETIDDILA 409 >gi|319789610|ref|YP_004151243.1| diaminopimelate decarboxylase [Thermovibrio ammonificans HB-1] gi|317114112|gb|ADU96602.1| diaminopimelate decarboxylase [Thermovibrio ammonificans HB-1] Length = 419 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 111/385 (28%), Gaps = 23/385 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ + A+K + + L + G + S E+ Sbjct: 33 TPAYVYSANAFRWWFNEFNSAFSQVEHTTCFAVKANSNVWVLKLLAELGAGADTVSAGEI 92 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKKI 118 + + K + D I + S+L +KL I Sbjct: 93 HRALTAGISPKKIVFAGVGKRPDEIEFALERDILMINVESESELETVNRVGEKLGKKAPI 152 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENKS 171 LR+NP V ++ G + +E + N G+ FH + Sbjct: 153 ALRVNPEVDPKTHPYISTGLHEAKFGVDYERAVELYKKAKEMKWVNPVGIHFHIGSQITD 212 Query: 172 FLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224 F + + + ++E GGG+ P ++ ++L ++ Sbjct: 213 TSAFGEAAEKVAELVKELHSLGIEVELFDAGGGLGVNYNPQEPPVPSEELAKQLIPAVKE 272 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283 ++ LEPG I N L T +L I + D+ + L + Sbjct: 273 LGCKLILEPGRRISANAGVLLTKLLYIKRRPNKTFYIVDAGMNDLARPALYGAYHHIVPV 332 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T V G C GDI + GD ++ Y + +N P Sbjct: 333 VNKGRKTETVDVVGPICETGDILAKGRELPECSEGDILAVLSAGAYGFTMASNYNSRPRP 392 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + T + + +D Sbjct: 393 PEILVEGSSTRVIRQRETISDLLAR 417 >gi|327484235|gb|AEA78642.1| Carboxynorspermidine decarboxylase, putative [Vibrio cholerae LMA3894-4] Length = 377 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 166/368 (45%), Positives = 245/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKV-SLGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + ES ++NG+MFH NCENK F +L Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V+ LK F+E+++VQ+YLEPGEAI+T T Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+++G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 305 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 364 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 365 EDFKRTLS 372 >gi|332969020|gb|EGK08060.1| diaminopimelate decarboxylase [Kingella kingae ATCC 23330] Length = 408 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 66/384 (17%), Positives = 125/384 (32%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L +++ + A+K + + + G + S E Sbjct: 17 GTPLYVYSENALTQAYRAYEQAFESSKSLICYAIKANSNLSIIQHFAKLGSGFDTVSGGE 76 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K N ++ +L++ + A +L K Sbjct: 77 IARVLAAGGAANKIIFSGVGKSVAEMEFALNAGIKCFNVESLPELDRLNEVAARLGKIAP 136 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LRINP V ++ G D + NV G+ H + Sbjct: 137 VSLRINPDVDAKTHPYISTGLKENKFGIAMADAERAYQHASSLQHLNVVGIDCHIGSQLT 196 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + + + ++ I LGGG+ KD + ++ Q +++ Sbjct: 197 DLSPLVEACERMLLLVDKLAAQGIVLQHIDLGGGVGIVYKDEQTPDLAEYAQAVQKLLAG 256 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + LEPG ++V N TL T V I + KN VIVD+++ + L Sbjct: 257 RDLGLVLEPGRSLVGNAGTLLTRVEFIKQGEEKNFVIVDAAMNDLMRPALYQAYHHIENA 316 Query: 284 NTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + AM V G C GD + + GD + Y + + +N Sbjct: 317 SDKKQPAMFADVVGPICETGDFLAQNREIV-AEQGDVLLVRSAGAYGASMASNYNTRCRA 375 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + D + + +D Sbjct: 376 VEVLVQGDNVRVIRQRETLDDLLR 399 >gi|15641630|ref|NP_231262.1| carboxynorspermidine decarboxylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121730008|ref|ZP_01682422.1| carboxynorspermidine decarboxylase [Vibrio cholerae V52] gi|147673110|ref|YP_001217174.1| carboxynorspermidine decarboxylase [Vibrio cholerae O395] gi|153214667|ref|ZP_01949527.1| carboxynorspermidine decarboxylase [Vibrio cholerae 1587] gi|153819366|ref|ZP_01972033.1| carboxynorspermidine decarboxylase [Vibrio cholerae NCTC 8457] gi|153822200|ref|ZP_01974867.1| carboxynorspermidine decarboxylase [Vibrio cholerae B33] gi|227081776|ref|YP_002810327.1| carboxynorspermidine decarboxylase [Vibrio cholerae M66-2] gi|254285432|ref|ZP_04960397.1| carboxynorspermidine decarboxylase [Vibrio cholerae AM-19226] gi|254848743|ref|ZP_05238093.1| carboxynorspermidine decarboxylase [Vibrio cholerae MO10] gi|298498294|ref|ZP_07008101.1| carboxynorspermidine decarboxylase [Vibrio cholerae MAK 757] gi|9656136|gb|AAF94776.1| carboxynorspermidine decarboxylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121628242|gb|EAX60759.1| carboxynorspermidine decarboxylase [Vibrio cholerae V52] gi|124115189|gb|EAY34009.1| carboxynorspermidine decarboxylase [Vibrio cholerae 1587] gi|126510080|gb|EAZ72674.1| carboxynorspermidine decarboxylase [Vibrio cholerae NCTC 8457] gi|126520268|gb|EAZ77491.1| carboxynorspermidine decarboxylase [Vibrio cholerae B33] gi|146314993|gb|ABQ19532.1| carboxynorspermidine decarboxylase [Vibrio cholerae O395] gi|150424704|gb|EDN16640.1| carboxynorspermidine decarboxylase [Vibrio cholerae AM-19226] gi|227009664|gb|ACP05876.1| carboxynorspermidine decarboxylase [Vibrio cholerae M66-2] gi|227013532|gb|ACP09742.1| carboxynorspermidine decarboxylase [Vibrio cholerae O395] gi|254844448|gb|EET22862.1| carboxynorspermidine decarboxylase [Vibrio cholerae MO10] gi|297542627|gb|EFH78677.1| carboxynorspermidine decarboxylase [Vibrio cholerae MAK 757] Length = 387 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 165/368 (44%), Positives = 245/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 16 LRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 76 EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKAS-LGLR 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + ES ++NG+MFH NCENK F +L Sbjct: 135 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 194 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V+ LK F+E+++VQ+YLEPGEAI+T T Sbjct: 195 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 254 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 314 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+++G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 315 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 374 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 375 EDFKRTLS 382 >gi|138895872|ref|YP_001126325.1| diaminopimelate decarboxylase [Geobacillus thermodenitrificans NG80-2] gi|196248761|ref|ZP_03147461.1| diaminopimelate decarboxylase [Geobacillus sp. G11MC16] gi|134267385|gb|ABO67580.1| Diaminopimelate decarboxylase [Geobacillus thermodenitrificans NG80-2] gi|196211637|gb|EDY06396.1| diaminopimelate decarboxylase [Geobacillus sp. G11MC16] Length = 439 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 62/401 (15%), Positives = 121/401 (30%), Gaps = 37/401 (9%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSS 58 M TP Y+ D + GV+ + A K F++ M + Sbjct: 28 MYGTPLYIYDVALIRARARAFKEAFHLQGVRAQVAYASKAFSSIAMVQLAAEEGLSLDVV 87 Query: 59 SLYEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E+ F E ++ +D A+ I+ + +L + A Sbjct: 88 SGGELYTAIAAGFPSERIHFHGNNKSRDELAMALEHGIGCIVADNFYELELIEQLAAASG 147 Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFH 164 + + LR+ P V + S+ G E + + S + G+ H Sbjct: 148 RVVPVLLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEAFRRVMASSAFQLLGVHCH 207 Query: 165 NNCEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 + L + + + + I+LGGG + + Sbjct: 208 IGSQIFETTGFVLAAQKVFTKMAEWNKAYGFIPSVINLGGGFGIRYTEEDDPIPVSAYVD 267 Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEA 267 + +I++EPG ++V + T T+ + VD + Sbjct: 268 CIVEEVKKQAKACQLPLPEIWIEPGRSLVGDAGTTIYTIGSRKDVPNIRTYLAVDGGMSD 327 Query: 268 HVPDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 ++ L + + N T + G+ C +GD+ K GD ++ Sbjct: 328 NIRPALYGAKYEAVLANRVLGERTETVSIAGKCCESGDMLIWDLALPETKPGDYLAVFCT 387 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N + P I ++ +Y D Sbjct: 388 GAYGYSMANNYNRLPRPAIVFVENGDAQLVVKRETYEDLIQ 428 >gi|262165800|ref|ZP_06033537.1| carboxynorspermidine decarboxylase putative [Vibrio mimicus VM223] gi|262025516|gb|EEY44184.1| carboxynorspermidine decarboxylase putative [Vibrio mimicus VM223] Length = 377 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 165/368 (44%), Positives = 244/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVKEVVDICDKMIFNSQSQLAAYRHLVEGKA-SLGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + E+ + ++G+MFH NCENK F ++L Sbjct: 125 INPGVSYAGQDLANPARKFSRLGVQADHIDENVFETIDGVMFHMNCENKDVDAFISLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V LK FSE++ VQ+YLEPGEA++T T Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVDKLGAALKAFSERHGVQLYLEPGEAVITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+K+G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 305 GDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERQNGEIQKINQFGY 364 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 365 EDFKRTLS 372 >gi|322421972|ref|YP_004201195.1| diaminopimelate decarboxylase [Geobacter sp. M18] gi|320128359|gb|ADW15919.1| diaminopimelate decarboxylase [Geobacter sp. M18] Length = 417 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ K L + A + ++K + + T G S E Sbjct: 26 GSPVYIYSKATLERHFKAMDDAFAGAPHTICYSVKANSNLAVLKTFINLGSGVDIVSGGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + + Y+ K + A + +L++ + A +L+KK G Sbjct: 86 LYRALAAGVDPKKVVYSGVGKRDDEIAYALETGILLFNVESEQELDRINEVAGRLNKKAG 145 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 + R+NP V ++ G + + + + G+ H + Sbjct: 146 IAIRVNPDVDPQTHPYITTGLKKAKFGINIERALGQYQRAKELSNLEILGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224 F +K +++ +++++ LGGG+ D + E ++ Sbjct: 206 KVSPFVDAIKKLKRLLKGVREMGIEVKYLDLGGGLGIQYNDEAPPLPADYGSSILEETKD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---AT 280 + + EPG +V N L T L + KN VIVD+ + L Sbjct: 266 LGLHLLFEPGRNLVGNAGILVGTCLYTKKGEEKNFVIVDAGMNDLARPALYGSFHGVRPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 G + G C +GD + + GD+I+F Y + +N Sbjct: 326 FRNQDGVIEGDIVGPICESGDFLVKDREIPNFQQGDQIAFMSAGAYGFTMSSNYNSRPRV 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + D Sbjct: 386 AEVMVDGVKFEVVRERETLEDLVK 409 >gi|229515019|ref|ZP_04404479.1| hypothetical protein VCB_002672 [Vibrio cholerae TMA 21] gi|229347724|gb|EEO12683.1| hypothetical protein VCB_002672 [Vibrio cholerae TMA 21] Length = 377 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 165/368 (44%), Positives = 245/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKVIFNSQSQLAAYRHLVEGKAS-LGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + ES ++NG+MFH NCENK F +L Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V+ LK F+E+++VQ+YLEPGEAI+T T Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+++G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 305 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 364 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 365 EDFKRTLS 372 >gi|157960206|ref|YP_001500240.1| diaminopimelate decarboxylase [Shewanella pealeana ATCC 700345] gi|157845206|gb|ABV85705.1| diaminopimelate decarboxylase [Shewanella pealeana ATCC 700345] Length = 414 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 66/382 (17%), Positives = 115/382 (30%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWRAFDNAVSEHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K + N + ++L + A +L K Sbjct: 86 LSRVIEAGGDPTKVVFSGVGKTVSEMEMALNLGIYCFNVESAAELEQLNLVALRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNC--- 167 + LRINP V ++ G ++ E V G+ H Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEAIFARANELPGLAVKGVDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 E K FL + + +I+ +GGG+ T D + L E Sbjct: 206 EIKPFLDAMDRMLALIDRLAEQGIEIKHFDVGGGLGVTYDDEQPPQPDVYAAALLERLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES---AT 280 +++ EPG AI N T VL + EN VD ++ + L Sbjct: 266 RDLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFALVDGAMNDLIRPSLYSAWQKIVPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 I ++ V G C GD G+ V+ GD ++ Y + +N Sbjct: 326 IERAGESHSYDVVGPVCETGDFLGKDRQL-NVQEGDYLAVRSSGAYGFTMASNYNSRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + D Sbjct: 385 AELMVDGDKAYVIREREKVAQL 406 >gi|304388543|ref|ZP_07370644.1| diaminopimelate decarboxylase [Neisseria meningitidis ATCC 13091] gi|304337463|gb|EFM03631.1| diaminopimelate decarboxylase [Neisseria meningitidis ATCC 13091] Length = 406 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LRINP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYHYAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + R + N Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401 >gi|283953863|ref|ZP_06371393.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 414] gi|283794642|gb|EFC33381.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 414] Length = 382 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 140/376 (37%), Positives = 212/376 (56%), Gaps = 18/376 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLAMVGQKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EID + S I+FN+++Q +KF+ A+ IGLR Sbjct: 66 EAKFAKEYMDKEIHTYSPAFKEDEIDEIASLSHHIVFNSLAQFHKFQ--AKTQKNSIGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S A+LK Sbjct: 124 CNIEFSIAPKELYNPCGRYSRLGIRAKDLENLDLSGIEGLHFHALCE-ESADALEAVLKA 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E++FG +I Q++W++ GGG H T K Y V+ K FS+KY VQ+YLEPGEA+ T Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLITLCKNFSDKYGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 243 GNLVASVIDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKKSELREN 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + ++ G +CLAGDI GE+ F+K ++IGD+I F D Y I + FNGI +P + + + Sbjct: 303 EFAYLLTGNTCLAGDIMGEYAFDKKLQIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLD 362 Query: 347 VDGTIKAIREFSYNDY 362 ++ IREFSY DY Sbjct: 363 HKNELQMIREFSYKDY 378 >gi|261393306|emb|CAX50938.1| diaminopimelate decarboxylase (DAP decarboxylase) [Neisseria meningitidis 8013] Length = 406 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 129/385 (33%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRRAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + I +E + LGGG+ +D V D + Q +++ Sbjct: 198 DLSPLIEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLMGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + R + N Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401 >gi|15677805|ref|NP_274969.1| diaminopimelate decarboxylase [Neisseria meningitidis MC58] gi|13124076|sp|Q9JXM2|DCDA_NEIMB RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|7227237|gb|AAF42304.1| diaminopimelate decarboxylase [Neisseria meningitidis MC58] gi|316985611|gb|EFV64558.1| diaminopimelate decarboxylase [Neisseria meningitidis H44/76] gi|325139296|gb|EGC61837.1| diaminopimelate decarboxylase [Neisseria meningitidis CU385] gi|325201024|gb|ADY96479.1| diaminopimelate decarboxylase [Neisseria meningitidis H44/76] Length = 414 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LRINP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYHYAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + R + N Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401 >gi|254475385|ref|ZP_05088771.1| diaminopimelate decarboxylase [Ruegeria sp. R11] gi|214029628|gb|EEB70463.1| diaminopimelate decarboxylase [Ruegeria sp. R11] Length = 421 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 61/390 (15%), Positives = 123/390 (31%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ LL + + A+K + + TL Q G S Sbjct: 25 VGTPFYVYSTATLLRHFQLFDDALAGMDHLVCYAMKAASNQAILKTLAQAGAGMDVVSQG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E + G+ ++ K E A+ + ++ A L Sbjct: 85 EYLRAKAAGVPGDKIVFSGVGKTAEEIRTALSGGIRQFNVESEPEMEVINAVALDLGVVA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + R+NP V + ++ G E +V G+ H + Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIAKAREVYAHAATLKGLDVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + I + LGGG+ ++ Q +K+ Sbjct: 205 TELEPFRLAYQKVAELTETLRADGHDIRRLDLGGGLGIPYTRSNEAPPLPVEYGQLIKDT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +V+I +EPG I N + + V+ + E ++ +I+D ++ + + Sbjct: 265 LGHLNVEIEIEPGRLIAGNAGLMVSKVIYVKEGEGRDFLILDGAMNDLIRPAMYEAHHDI 324 Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P + G C GD F + P+ D ++F Y + +N Sbjct: 325 VPVVEPEPGLEPRPYDIVGPVCETGDTFAKARLMPPLSANDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D R +++ N Sbjct: 385 SRPLIPEVLVHGDQFAVIRRRPDFDEMINR 414 >gi|54309400|ref|YP_130420.1| putative carboxynorspermidine decarboxylase [Photobacterium profundum SS9] gi|46913836|emb|CAG20618.1| putative carboxynorspermidine decarboxylase [Photobacterium profundum SS9] Length = 377 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 168/368 (45%), Positives = 240/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS Y Sbjct: 6 LKTPYFMIDESKLVANLEKAKLLKELSGVKLVLALKCFSTWGVFDLIKPYLDGTTSSGPY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ +QL ++ + +GLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVKDVAEICDKMIFNSQNQLAAYRHLVEGKA-SLGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R +SRLG + + N++G+MFH NCENK F +L + Sbjct: 125 LNPGVSYAGQDLANPARQYSRLGVQWDHIDTAVFDNLDGVMFHMNCENKDEDAFIRLLND 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I +FG + +++W+SLGGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISDKFGKHLDKLDWVSLGGGVFFTWPGYNIEKLAAALKTFSEKHGVQLYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 L TV+DI EN IVDS+ EAH D L+Y E A+I G + ++ SCLA Sbjct: 245 ADLVVTVVDIVENEIKTAIVDSATEAHRLDTLIYDEPASIAEASEQGAHQYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+KIG R+ D AGY + + NWFNG+ MP+I + +G I+ + EF Y Sbjct: 305 GDQFCVTQFDEPLKIGQRLHITDSAGYTMVKLNWFNGLKMPSIYCERANGEIEKLNEFGY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 DDFKRSLS 372 >gi|152993635|ref|YP_001359356.1| diaminopimelate decarboxylase [Sulfurovum sp. NBC37-1] gi|151425496|dbj|BAF72999.1| diaminopimelate decarboxylase [Sulfurovum sp. NBC37-1] Length = 409 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 70/383 (18%), Positives = 126/383 (32%), Gaps = 21/383 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + + + A+K + + L + G S+ E Sbjct: 13 GTPLYMYDFDYMERRYNDLKEAFAGKKSLINYAVKANSNLSVIAHLAKLGTGADCVSIGE 72 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119 V ++ K + D + + +++ + + A++L K+ Sbjct: 73 VRRALDAGVDRYKIIFSGVGKRDDEIREALEKDILMLNLESEAEMKRVEMVAKELGKEAR 132 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + R+NP++ ++ G + I N G+ FH + Sbjct: 133 ISIRVNPNIDPQTHPYISTGLHENKFGVEIDMAKRMYIYANKSEYLNPVGIHFHIGSQLT 192 Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 ++ ++ + I++ +GGGI D PV+D+ + + E ++ Sbjct: 193 KLDPIKESAVIVADLVRSLKVIKIDIKFFDVGGGIGVVYSDETTIPVRDYTEAIFEATKG 252 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES-ATIY 282 V + EPG +V N T+VL + K VIVD + + L Sbjct: 253 LDVTLLCEPGRYMVANAGAFFTSVLYEKVNDGKRFVIVDGGMNDLIRPSLYNAYHKIDAV 312 Query: 283 PNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 G T V G C +GD FG+ P+K D I Y + +N P Sbjct: 313 MVEGERTFADVVGPVCESGDFFGKNVPLPPLKHNDLIVVHSAGAYGFTMASNYNTRPKPA 372 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 R SY D Sbjct: 373 EVALEAGKDRLIRRRESYEDQVR 395 >gi|229529344|ref|ZP_04418734.1| hypothetical protein VCG_002439 [Vibrio cholerae 12129(1)] gi|229333118|gb|EEN98604.1| hypothetical protein VCG_002439 [Vibrio cholerae 12129(1)] Length = 377 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 165/368 (44%), Positives = 245/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKAS-LGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + ES ++NG+MFH NCENK F +L Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHINCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V+ LK F+E+++VQ+YLEPGEAI+T T Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+++G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 305 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 364 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 365 EDFKRTLS 372 >gi|157415737|ref|YP_001482993.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 81116] gi|157386701|gb|ABV53016.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 81116] gi|307748378|gb|ADN91648.1| Carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni M1] Length = 382 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 137/376 (36%), Positives = 210/376 (55%), Gaps = 18/376 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EI + S I+FN+++Q +KF+ K +GLR Sbjct: 66 EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSK--TQKNSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S A+LK Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKV 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +++FG +I Q++W++ GGG H T K Y V+ K FS+KY VQ+YLEPGEA+ T Sbjct: 183 FKEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + ++ G +CLAGD+ GE+ F+K +KIGD+I F D Y I + FNGI +P + + + Sbjct: 303 EFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLD 362 Query: 347 VDGTIKAIREFSYNDY 362 ++ IREFSY DY Sbjct: 363 HKNELQMIREFSYKDY 378 >gi|153802246|ref|ZP_01956832.1| carboxynorspermidine decarboxylase [Vibrio cholerae MZO-3] gi|124122228|gb|EAY40971.1| carboxynorspermidine decarboxylase [Vibrio cholerae MZO-3] Length = 387 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 165/368 (44%), Positives = 245/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 16 LRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 76 EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKVS-LGLR 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + ES ++NG+MFH NCENK F +L Sbjct: 135 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 194 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V+ LK F+E+++VQ+YLEPGEAI+T T Sbjct: 195 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 254 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 314 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+++G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 315 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 374 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 375 EDFKRTLS 382 >gi|261365975|ref|ZP_05978858.1| diaminopimelate decarboxylase [Neisseria mucosa ATCC 25996] gi|288565436|gb|EFC86996.1| diaminopimelate decarboxylase [Neisseria mucosa ATCC 25996] Length = 406 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 128/385 (33%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFENYQTAFAALSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A++L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALHAGVKCFNMESIPEIDRIQKVAERLGKTAS 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAARQSHLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I + +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLIEACERILILVDQLADEGIVLEHLDLGGGVGIVYQDETVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 EPKNIPPLTANIVGPICETGDFLGKDRTIA-CEEGDLLVIRSAGAYGASMASNYNTRNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + R + N Sbjct: 377 AEVLVDGSEYRLIRRRETLEQQMAN 401 >gi|224024113|ref|ZP_03642479.1| hypothetical protein BACCOPRO_00832 [Bacteroides coprophilus DSM 18228] gi|224017335|gb|EEF75347.1| hypothetical protein BACCOPRO_00832 [Bacteroides coprophilus DSM 18228] Length = 374 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 122/374 (32%), Positives = 189/374 (50%), Gaps = 17/374 (4%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 ++++ L NL + AGV+++LA K FA W F +Y+ TT+SS YE L +E Sbjct: 1 MEEKLLRKNLSLIKQVADQAGVEIILAFKAFAMWKSFPIFREYIRFTTASSEYEARLAYE 60 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRINPSV 126 +FG HAY+ AY + + L C I FN++SQ +F A + GLR+NP Sbjct: 61 EFGSRAHAYSPAYTEQNFPSFLKYCSHITFNSLSQFERFYPMAAAASEPISCGLRVNPEY 120 Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 S + L +P P +R G + + + G H +CE+ S+ L++IE++F Sbjct: 121 SEVEVELYNPCAPGTRFGVMADQLPDVLPEGIEGFHCHCHCESSSYE-LERTLQHIEEKF 179 Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLN 245 + Q++W++LGGG T KDY + LK ++Y QI LEPG A T L Sbjct: 180 SRWFPQLKWLNLGGGHLMTRKDYDTEHLIGLLKGLKQRYPHLQIILEPGSAFTWQTGPLV 239 Query: 246 TTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT------------GPYTAMV 292 +V+DI EN + D S H+PD L + G + + Sbjct: 240 ASVVDIVENRGIRTAILDVSFTCHMPDCLEMPYQPAVRGAETLPADAVKTASPGDHIYRL 299 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P++A+ + DG ++ Sbjct: 300 GGNSCLSGDYMGSWKFDHELQIGERIIFEDMIHYTMVKTNMFNGIHHPSVALLHEDGELE 359 Query: 353 AIREFSYNDYYNNL 366 R F Y DY + + Sbjct: 360 IYRNFRYEDYRDRM 373 >gi|299065455|emb|CBJ36624.1| Diaminopimelate decarboxylase [Ralstonia solanacearum CMR15] Length = 419 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 115/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L N + ++ A+K + + Q G S E Sbjct: 27 GTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 86 Query: 63 VMLGHEKFGG--ETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G + V D A+ + ++ +L++ + A L Sbjct: 87 LRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G ++ + V G+ H + Sbjct: 147 VSLRVNPDVDAKTHPYISTGLKGNKFGIAFEEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + ++ ++ I +GGG+ T D D + ++ Sbjct: 207 EVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 266 Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 + + EPG ++V N L T V + + D+++ + Sbjct: 267 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 326 Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + P + G C +GD G + GD ++ Y + +N Sbjct: 327 VPVRERGGAPTVYDIVGPVCESGDWLGRDRAL-DAQPGDLLAILSAGAYGFTMSSNYNTR 385 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D A + D Sbjct: 386 GRAAEVIVDGDRVHVARERERFEDLIR 412 >gi|258593057|emb|CBE69368.1| diaminopimelate decarboxylase [NC10 bacterium 'Dutch sediment'] Length = 418 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 72/385 (18%), Positives = 112/385 (29%), Gaps = 23/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+YL L ++ T + + A+K + G S Sbjct: 25 VGTPFYLYSHATLTHHFQTFDQAFADIPHLVCFAIKANSNGATLKLFADLGSGADVVSGG 84 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + K E D + +L D A + K Sbjct: 85 ELYRAMRAGIPPSRIVFAGVGKTREEMGFALKSDILMFNVESPQELRLLNDVAGAMGTKA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169 LRINP V S+ G +E +V G+ H + Sbjct: 145 RVALRINPDVDPKTHPYISTGLKKSKFGIDISLAMEEYRVAKELRHIDVVGVHQHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSE 223 F L + E I+++ +GGG+ T KD F + + + Sbjct: 205 TEIAPFVDSLVKVAGLIAELRQHGFAIQYLDVGGGLGITYKDEDPPVPRVFAEAMIAVIK 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---- 278 I LEPG IV N L T VL K+ ++VD+ + V L Sbjct: 265 DLGCTIVLEPGRVIVGNAGVLVTKVLYDKRTPAKHFIVVDAGMNDLVRPSLYGSFHSILP 324 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 A A V G C +GD + + G+ + Y + +N Sbjct: 325 ARRQKGREEVMADVVGPVCESGDFLAKDRSMPAPEPGELLVVMSAGAYGYTMSSSYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYY 363 + D SY D Sbjct: 385 RLPEILVKGDRWFTIRERESYEDLI 409 >gi|229508264|ref|ZP_04397769.1| hypothetical protein VCF_003500 [Vibrio cholerae BX 330286] gi|229511497|ref|ZP_04400976.1| hypothetical protein VCE_002906 [Vibrio cholerae B33] gi|229518636|ref|ZP_04408079.1| hypothetical protein VCC_002661 [Vibrio cholerae RC9] gi|229520778|ref|ZP_04410201.1| hypothetical protein VIF_001303 [Vibrio cholerae TM 11079-80] gi|229523718|ref|ZP_04413123.1| hypothetical protein VCA_001288 [Vibrio cholerae bv. albensis VL426] gi|229607838|ref|YP_002878486.1| hypothetical protein VCD_002752 [Vibrio cholerae MJ-1236] gi|255744947|ref|ZP_05418897.1| carboxynorspermidine decarboxylase putative [Vibrio cholera CIRS 101] gi|262161768|ref|ZP_06030786.1| carboxynorspermidine decarboxylase putative [Vibrio cholerae INDRE 91/1] gi|262169641|ref|ZP_06037332.1| carboxynorspermidine decarboxylase putative [Vibrio cholerae RC27] gi|229337299|gb|EEO02316.1| hypothetical protein VCA_001288 [Vibrio cholerae bv. albensis VL426] gi|229342333|gb|EEO07328.1| hypothetical protein VIF_001303 [Vibrio cholerae TM 11079-80] gi|229343325|gb|EEO08300.1| hypothetical protein VCC_002661 [Vibrio cholerae RC9] gi|229351462|gb|EEO16403.1| hypothetical protein VCE_002906 [Vibrio cholerae B33] gi|229355769|gb|EEO20690.1| hypothetical protein VCF_003500 [Vibrio cholerae BX 330286] gi|229370493|gb|ACQ60916.1| hypothetical protein VCD_002752 [Vibrio cholerae MJ-1236] gi|255737418|gb|EET92813.1| carboxynorspermidine decarboxylase putative [Vibrio cholera CIRS 101] gi|262021875|gb|EEY40585.1| carboxynorspermidine decarboxylase putative [Vibrio cholerae RC27] gi|262028500|gb|EEY47155.1| carboxynorspermidine decarboxylase putative [Vibrio cholerae INDRE 91/1] Length = 377 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 165/368 (44%), Positives = 245/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKAS-LGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + ES ++NG+MFH NCENK F +L Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V+ LK F+E+++VQ+YLEPGEAI+T T Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+++G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 305 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 364 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 365 EDFKRTLS 372 >gi|323494766|ref|ZP_08099865.1| carboxynorspermidine decarboxylase [Vibrio brasiliensis LMG 20546] gi|323310959|gb|EGA64124.1| carboxynorspermidine decarboxylase [Vibrio brasiliensis LMG 20546] Length = 377 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 170/368 (46%), Positives = 248/368 (67%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMIDEDKLVENLEKAKLLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + +GLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SLGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + ++++G+MFH NCENK F A+L + Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPQVFEDIDGVMFHMNCENKDVDAFIALLDS 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FG ++ +++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISEQFGQYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A+I G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYDEPASILEASEKGEHQYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F E +F++P++IG R+ D AGY + + NWFNG+ MP++ + DG I+ + EF Y Sbjct: 305 GDQFCEANFDQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCQRSDGAIEKLNEFDY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 SDFKRSLS 372 >gi|262171366|ref|ZP_06039044.1| carboxynorspermidine decarboxylase putative [Vibrio mimicus MB-451] gi|261892442|gb|EEY38428.1| carboxynorspermidine decarboxylase putative [Vibrio mimicus MB-451] Length = 377 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 165/368 (44%), Positives = 244/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIQPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVKEVVDICDKMIFNSQSQLAAYRHLVEGKAS-LGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + +S + ++G+MFH NCENK F ++L Sbjct: 125 INPGVSYAGQDLANPARKFSRLGVQADHIDDSVFETIDGVMFHMNCENKDVDAFISLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V LK FSE++ VQ+YLEPGEA++T T Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVDKLGAALKAFSERHGVQLYLEPGEAVITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+K+G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 305 GDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERQNGEIQKINQFGY 364 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 365 EDFKRTLS 372 >gi|260576231|ref|ZP_05844223.1| diaminopimelate decarboxylase [Rhodobacter sp. SW2] gi|259021499|gb|EEW24803.1| diaminopimelate decarboxylase [Rhodobacter sp. SW2] Length = 421 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 113/390 (28%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + L G S Sbjct: 25 VGTPFYCYSAATLTRHYALFTEALNPLPHLVCFAIKSLSNLAVLKLLGDLGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E G+ ++ +D A+ + +L A +L Sbjct: 85 EYRRARAAGVPGDRIVFSGVGKTRDEMRLALQGGIRQFNVESEPELRALSQVATELGLTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 I LR+NP V + ++ G + V G+ H + Sbjct: 145 PIALRVNPDVDARTHEKIATGKKENKFGIPISRAPQVYAEAARLPGLQVVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + I + I + LGGG+ + ++ Sbjct: 205 TELEPFEQAFQKIADLTQTLRAQGHDIRRLDLGGGLGIPYTRSNEAPPLPLDYGAMIQRT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N L V+ + + ++ +I+D+++ + Sbjct: 265 LGHLGCEIEIEPGRLISGNAGVLVAGVIYVKQGEDRDFLILDAAMNDLARPSMYGAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P V G C GD F + P+ GD ++F Y + +N Sbjct: 325 LPVTEAPPGTEMQPYDVVGPVCETGDSFAKGRALPPLAEGDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + D ++++ N Sbjct: 385 SRPLIPEVLVQGDHYAVIRARPTFDEILNR 414 >gi|53804982|ref|YP_113352.1| diaminopimelate decarboxylase [Methylococcus capsulatus str. Bath] gi|53758743|gb|AAU93034.1| diaminopimelate decarboxylase [Methylococcus capsulatus str. Bath] Length = 415 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 55/385 (14%), Positives = 126/385 (32%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S+ E Sbjct: 26 GTPCYVYSRATLERHWHAFDAALGDCPHLVCYAVKANSNIAILNLLARLGSGFDIVSVGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ +D A+ + +L++ A + + Sbjct: 86 LERVLAAGGDPSRVVFSGVGKREDELARALDTGIRCFNVEVAEELDRLDRLAGERGVKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCE-- 168 + LR+NP V ++ G + ++ + + V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLSENKFGIEVEEALVQYRRAARMPNLEVVGIDCHIGSQLT 205 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + F+ + + I + LGGG+ +D + ++L + Sbjct: 206 SSMPFIDALDRVLALVARLRGEGIAIRHLDLGGGLGIRYRDEDPPHPTEYAEQLFRRLGR 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI-- 281 + +I +EPG A+ N L T + + K+ IVD+++ + L + Sbjct: 266 HDFEILIEPGRAVAGNAGILLTRLEYLKANQTKHFAIVDAAMNDLLRPALYGAWQEIVPV 325 Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + ++ V G C GD G+ + + GD ++ Y + + +N Sbjct: 326 APRNDVESHSYDVVGPVCETGDFLGKSRELR-LVPGDLLAVRSAGAYGFSMSSNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P + + + + Sbjct: 385 PAEILVDGSAVYLIRERENVARLFA 409 >gi|115526828|ref|YP_783739.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisA53] gi|115520775|gb|ABJ08759.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisA53] Length = 421 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 65/390 (16%), Positives = 114/390 (29%), Gaps = 28/390 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHYRVFTEAFADTDALVCYAMKANSNQSVLRTLAKLGAGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ K D A+ + I + +L A + Sbjct: 85 EMARALAAGIPPSKIVFSGVGKTVDELRAALDHDILCINVESEPELEMLSALAMSMGKTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 I +R+NP V + ++ G V G+ H + Sbjct: 145 TISIRVNPDVDSGTHAKISTGKSENKFGIPLVKAREVYARAAALPGLRVTGVDVHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 A + + I + GGG+ + P + +K Sbjct: 205 TDLGPMEAAFRLLADFVTVLRGDGHTISHVDFGGGLGIPYYEDPTTPPEPLAYAAMVKRI 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + ++ EPG IV N L V+ + + K VI+D+++ + LY+ Sbjct: 265 THNLGCRLMFEPGRMIVGNAGILVARVIHVKHGDGKTFVIIDAAMNDLIRPT-LYEAYHD 323 Query: 281 IYPNT------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I P G TA V G C GD +K GD I+ Y + + Sbjct: 324 ILPIKAPAPGAGEITADVVGPVCETGDYLALSRRLPALKSGDLIAIMTAGAYGAVQACTY 383 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D S Sbjct: 384 NTRPLVPEVLVKGDQYAVIRPRLSVEQLIA 413 >gi|237756659|ref|ZP_04585168.1| diaminopimelate decarboxylase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691179|gb|EEP60278.1| diaminopimelate decarboxylase [Sulfurihydrogenibium yellowstonense SS-5] Length = 419 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 55/380 (14%), Positives = 126/380 (33%), Gaps = 22/380 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+++ K+ +L+ ++ K+ + ALK + + + G S Sbjct: 29 VGTPFFVYSKKAILDKINQYKEAFKDYDTLICYALKANSNLSLLKIFEENGLGADIVSGG 88 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ F Y K A+ N + + +L+ + A Q+ Sbjct: 89 ELYKAKKAGFSSNKIVYAGVGKTDFEISYAISENILSFNVESFMELDVINEIASKQEKKA 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + +R+NP+V S+ G +++ K NV G+ H + Sbjct: 149 NVSIRVNPNVDPKTHPYISTGLKKSKFGIDIDQALDAYKKAVKLENLNVVGVHCHIGSQI 208 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFS 222 F + ++ + ++++I +GGG+ + Sbjct: 209 MDVSVFREAAEKVVDLVFKLKKEGIELKFIDMGGGLGVKYHPDDNPPTPKDLADAIIPVV 268 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI 281 ++ +++ +EPG +++ L T V+ + + + ++ DS + V + + Sbjct: 269 KQTGLKLIIEPGRSLIAEAGALITKVIFLKDKQEKHFVIVDSGMNDLVRPAMYNAYHHVL 328 Query: 282 YPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 A + G C GD V+ GD ++ Y + + +N + Sbjct: 329 NVQEKDEEMIADIVGPICETGDFLALDRKIGKVERGDLLAIMTAGAYGSSMSSNYNVRPI 388 Query: 340 PTIAVKNVDGTIKAIREFSY 359 + + Y Sbjct: 389 ALEVLVDGPNFKVIKEREDY 408 >gi|84386971|ref|ZP_00989995.1| carboxynorspermidine decarboxylase [Vibrio splendidus 12B01] gi|84378261|gb|EAP95120.1| carboxynorspermidine decarboxylase [Vibrio splendidus 12B01] Length = 377 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 168/368 (45%), Positives = 242/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS Y Sbjct: 6 LKTPYFMINEDKLIANLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LGHE FGGETHAY+V Y + ++ V CD +IFN+ SQ ++ + +GLR Sbjct: 66 EVKLGHETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQFEAYRHIVEGKA-SLGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + +NG+MFH NCENK F +L++ Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDEINGVMFHMNCENKDVDAFIGLLES 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FG + +++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISEQFGEHLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A++ G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHDYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F E F++P+KIG ++ D AGY + + NWFNG+ MP+I + +G ++ + EF Y Sbjct: 305 GDQFCEASFDEPLKIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYCERSNGDVQKLNEFGY 364 Query: 360 NDYYNNLS 367 D+ +LS Sbjct: 365 EDFKRSLS 372 >gi|325141466|gb|EGC63940.1| diaminopimelate decarboxylase [Neisseria meningitidis 961-5945] gi|325199068|gb|ADY94524.1| diaminopimelate decarboxylase [Neisseria meningitidis G2136] Length = 414 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAAHLGKTAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LRINP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + I +E + LGGG+ +D V D + Q +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + N G R + N Sbjct: 377 AEVLVNGGGYKLIRRRETLEQQMAN 401 >gi|254674321|emb|CBA10105.1| Diaminopimelate decarboxylase [Neisseria meningitidis alpha275] Length = 406 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAAHLGKTAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LRINP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + I +E + LGGG+ +D V D + Q +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + N G R + N Sbjct: 377 AEVLVNGGGYKLIRRRETLEQQMAN 401 >gi|254501211|ref|ZP_05113362.1| diaminopimelate decarboxylase [Labrenzia alexandrii DFL-11] gi|222437282|gb|EEE43961.1| diaminopimelate decarboxylase [Labrenzia alexandrii DFL-11] Length = 424 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 68/389 (17%), Positives = 123/389 (31%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + + A+K + + TL Q G S Sbjct: 25 VGTPFYVYSTATLTRHYEVFSSAFADIPSLVCYAMKANSNQAVLATLAQLGAGMDVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ K A D + +L++ A K+ K Sbjct: 85 ELRRARAAGVPANKIVFSGVGKTETEQAYALTEDILCFNVESEPELHQLSRVATKIGKTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 +RINP V + ++ G + E V G+ H + Sbjct: 145 RVSMRINPDVDAKTHAKIATGKAENKFGIPWQRAREVYATAASLPGLKVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + + + I+ + LGGG+ + + +K+ Sbjct: 205 TELEPFDSAFARLGELITDLRGQGHAIDHVDLGGGLGIPYVTDNDPPPHPDAYAEVVKKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + ++ EPG I N L T V+ + E KN VIVD+ + + L Sbjct: 265 VRELDCKVMFEPGRMIAGNAGILVTQVIYVKEGADKNFVIVDAGMNDLIRPTLYEAYHEV 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + +TA V G C GD + V GD ++ Y + + +N Sbjct: 325 RPVSEPDVNADRFTADVVGPVCETGDFLAQNRDMPKVNAGDMLAVYSAGAYGSVQSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + N D SY + + Sbjct: 385 SRLLVPEVLVNADQFAVIRPRPSYEELLD 413 >gi|77464302|ref|YP_353806.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides 2.4.1] gi|332559193|ref|ZP_08413515.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides WS8N] gi|77388720|gb|ABA79905.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides 2.4.1] gi|332276905|gb|EGJ22220.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides WS8N] Length = 421 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 116/392 (29%), Gaps = 26/392 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + L G S Sbjct: 25 VGTPFYCYSAATLERHYRLFTEALTPLPHLVCFAIKSLSNLAVLKLLGDLGAGMDVVSAG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E + G+ ++ ++ A+ + ++ + A L Sbjct: 85 EYLRARAAGVPGDRIVFSGVGKTREEMRIALEGGIRQFNVESEPEMRALSEVASSMGLRA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 I +R+NP V + ++ G + + V G+ H + Sbjct: 145 PIAVRVNPDVDARTHEKIATGKKENKFGIPIERASEVYAEAAALPGLEVMGIDVHIGSQL 204 Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + +I + LGGG+ D+ +K Sbjct: 205 TELEPFEQAYLKVAELTGRLRAEGHEIRRLDLGGGLGIPYTRSNEAPPLPTDYGALIKRT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N+ L + V+ + ++ +I+D+++ V + Sbjct: 265 VGHLGCEIEIEPGRLISGNSGVLVSRVIYVKNGEGRDFLILDAAMNDLVRPSMYGAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C GD F + P+ GD ++F Y + +N Sbjct: 325 VPLAEAAPGTESQPYDVVGPVCETGDTFAKARALPPMAEGDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + D ++++ S Sbjct: 385 SRPLVPEVLVRGDHFAVIRARPTFDEMLGRDS 416 >gi|126463144|ref|YP_001044258.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides ATCC 17029] gi|126104808|gb|ABN77486.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides ATCC 17029] Length = 421 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 116/392 (29%), Gaps = 26/392 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + L G S Sbjct: 25 VGTPFYCYSAATLERHYRLFTEALTPLPHLVCFAIKSLSNLAVLKLLGDLGAGMDVVSAG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E + G+ ++ ++ A+ + ++ + A L Sbjct: 85 EYLRARAAGVPGDRIVFSGVGKTREEMRIALEGGIRQFNVESEPEMRALSEVASSMGLRA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 I +R+NP V + ++ G + + V G+ H + Sbjct: 145 PIAVRVNPDVDARTHEKIATGKKENKFGIPIERASEVYAEAAALPGLEVMGIDVHIGSQL 204 Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + +I + LGGG+ D+ +K Sbjct: 205 TELEPFEQAYLKVAELTGRLRAEGHEIRRLDLGGGLGIPYTRSNEAPPLPTDYGALIKRT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N+ L + V+ + ++ +I+D+++ V + Sbjct: 265 VGHLGCEIEIEPGRLISGNSGVLVSRVIYVKNGEGRDFLILDAAMNDLVRPSMYGAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C GD F + P+ GD ++F Y + +N Sbjct: 325 VPLAEAAPGTDSQPYDVVGPVCETGDTFAKARALPPMAEGDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + D ++++ S Sbjct: 385 SRPLVPEVLVRGDHFAVIRARPTFDEMLGRDS 416 >gi|254438389|ref|ZP_05051883.1| diaminopimelate decarboxylase [Octadecabacter antarcticus 307] gi|198253835|gb|EDY78149.1| diaminopimelate decarboxylase [Octadecabacter antarcticus 307] Length = 421 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 56/390 (14%), Positives = 116/390 (29%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ LL + + A+K + + L G S Sbjct: 25 VGTPFYVYSTATLLRHFQLFDDALAGMDHLICFAVKSLSNVAVLKLLGDAGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E + G+ ++ ++ A++ + ++ + A L K Sbjct: 85 EYLRAKAAGVSGDRIVFSGIGKTREEMRLALVGGIRQFNVESEPEMEVLSEVAMSLGKIA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + R+NP V + + G + + G+ H + Sbjct: 145 PITVRVNPDVDAKTHAKISTGKKEDKFGIPISRARDVYAMAAKLPGLKIIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + + + + I + LGGG+ + +KE Sbjct: 205 TELEPFRLAYRKVAELTEQLRSDGHDISRLDLGGGLGIPYARDNNAPPLPIEYGALIKEE 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N L V+ + + +IVD+++ + + Sbjct: 265 VGHLGCEIEIEPGRLISGNAGLLVAKVIYVKSGEDREFLIVDAAMNDLIRPAMYDAWHDI 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C +GD F + ++ + F Y+ + +N Sbjct: 325 VPVIESAAGVEQTPYDVVGPICESGDTFAKGRMLPTLQSEALVGFRSAGAYSAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + N D R ++ D N Sbjct: 385 SRPLIPEVLVNGDQFAVIRRRPTFEDMINR 414 >gi|323345634|ref|ZP_08085857.1| carboxynorspermidine decarboxylase [Prevotella oralis ATCC 33269] gi|323093748|gb|EFZ36326.1| carboxynorspermidine decarboxylase [Prevotella oralis ATCC 33269] Length = 417 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 121/377 (32%), Positives = 190/377 (50%), Gaps = 16/377 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ ++++L +NL + + A V+++LA K FA W F +Y+ TT+SSLYE Sbjct: 41 PAYVAEERRLRHNLSIINKVAERADVEIILAFKAFALWKCFPIFREYIRATTASSLYEAR 100 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRI 122 LG E+FG +TH ++ AY D EI+ + S + FN++SQ +F + IGLR+ Sbjct: 101 LGFEEFGAKTHTFSPAYTDYEINDIASYSSHLTFNSLSQYERFHKRVCKENPDISIGLRV 160 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S L +P P +R G K+V+G H +CE+ F L +I Sbjct: 161 NPEYSEVSTDLYNPCSPGTRFGITADKLPAVLPKDVDGFHCHCHCESG-ADVFERTLAHI 219 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E +F + Q++WI+ GGG T KDY ++ L+ F +Y +I LEPG A Sbjct: 220 EGKFSKWFPQLKWINFGGGHLITRKDYDIERLVYILQRFHARYPNLKIILEPGSAFAWQI 279 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT-----------GPYT 289 +L + V+DI E+ V + S H+PD L + + Sbjct: 280 GSLVSQVVDIVEDQYIRTAVLNVSFTCHMPDCLEMPYMPNVRGAEIVEESNVNDKAKEFL 339 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 + G SCLAGD G + F+ +K+G+ + FED+ Y + FNGI P+I + + DG Sbjct: 340 YRLGGNSCLAGDFMGMWQFDHELKVGENVIFEDMIHYTTVKTCMFNGITHPSIVIAHDDG 399 Query: 350 TIKAIREFSYNDYYNNL 366 ++ +R+F Y DY + + Sbjct: 400 RLEILRQFGYEDYKSRM 416 >gi|221640187|ref|YP_002526449.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides KD131] gi|221160968|gb|ACM01948.1| Diaminopimelate decarboxylase [Rhodobacter sphaeroides KD131] Length = 435 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 116/392 (29%), Gaps = 26/392 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + L G S Sbjct: 39 VGTPFYCYSAATLERHYRLFTEALTPLPHLVCFAIKSLSNLAVLKLLGDLGAGMDVVSAG 98 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E + G+ ++ ++ A+ + ++ + A L Sbjct: 99 EYLRARAAGVPGDRIVFSGVGKTREEMRIALEGGIRQFNVESEPEMRALSEVASSMGLRA 158 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 I +R+NP V + ++ G + + V G+ H + Sbjct: 159 PIAVRVNPDVDARTHEKIATGKKENKFGIPIERASEVYAEAAALPGLEVMGVDVHIGSQL 218 Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + +I + LGGG+ D+ +K Sbjct: 219 TELEPFEQAYLKVAELTGRLRAEGHEIRRLDLGGGLGIPYTRSNEAPPLPTDYGALIKRT 278 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N+ L + V+ + ++ +I+D+++ V + Sbjct: 279 VGHLGCEIEIEPGRLISGNSGVLVSRVIYVKNGEGRDFLILDAAMNDLVRPSMYGAHHDI 338 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C GD F + P+ GD ++F Y + +N Sbjct: 339 VPLAEAAPGTESQPYDVVGPVCETGDTFAKARALPPMAEGDLVAFRSAGAYGAVMASEYN 398 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + D ++++ S Sbjct: 399 SRPLVPEVLVRGDHFAVIRARPTFDEMLGRDS 430 >gi|257092050|ref|YP_003165691.1| diaminopimelate decarboxylase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044574|gb|ACV33762.1| diaminopimelate decarboxylase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 414 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 64/384 (16%), Positives = 120/384 (31%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L +L + A+K + + D + G S E Sbjct: 26 GTPCWVYSRAALEASLAEFERELAGLDALVCYAVKANSNLAVLDVFARRGAGFDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K + D + +L++ A +L Sbjct: 86 LRRALAAGADPRRIVFSGVGKTAAEMELALAADILCFNVESAPELDRLSAVAGRLGKTAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G ++ + ++G+ H + Sbjct: 146 ISLRVNPDVDAKTHPYISTGLKENKFGVAYEEALALYRHAASLPNLTISGIDCHIGSQLL 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 F+A L I + + I LGGG+ +D L+ +K Sbjct: 206 DPAPFAAALDKILTLVDQLAANGIVLHHIDLGGGLGIRYRDEDAPTVQAYLQPMLQKLRD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---AT 280 +Q+ LEPG +V N L T V + +KN IVD+++ L Sbjct: 266 RHLQVLLEPGRRLVGNAGLLLTRVEYLKPGEVKNFAIVDAAMNDLARPALYGSWHDIVPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + P + G C +GD G + GD ++ Y + + +N Sbjct: 326 VAPQGATRPWEIVGPVCESGDFLGHGRDLA-LATGDLLAIMSAGAYGMAMSSNYNSRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + R + + Y Sbjct: 385 AEVMVDGADVHLVRRRETAEELYA 408 >gi|309782874|ref|ZP_07677594.1| diaminopimelate decarboxylase [Ralstonia sp. 5_7_47FAA] gi|308918298|gb|EFP63975.1| diaminopimelate decarboxylase [Ralstonia sp. 5_7_47FAA] Length = 419 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 114/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L N + + A+K + + Q G S E Sbjct: 27 GTPTYVYSRAALTANYRAYAAACEGRNAHVQYAMKANSNLAVLQVFAQLGAGFDIVSAGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K D A+ ++ +L++ D A Sbjct: 87 LKRVLAAGAPAAKVVFSGVGKSADEMRFALKVGVACFNVESIPELHRLNDVAASMGKVAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LRINP V ++ G + + V G+ H + Sbjct: 147 VSLRINPDVDAKTHPYISTGLKGNKFGVAFDEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + L ++ + ++ I +GGG+ T D D + ++ Sbjct: 207 EVSPYLDALDKVLDVVTQLDAEGIRLAHIDVGGGLGITYTDETPPDITAFARTLLDRVEQ 266 Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 + + EPG ++V N L T V + + D+++ + Sbjct: 267 RGFGDRTVLFEPGRSLVGNAGLLLTRVEYLKPGASKNFCIVDAAMNDLARPAMYEAYHHI 326 Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + P V G C +GD G V+ GD ++ Y + +N Sbjct: 327 VPVRESQSAPVVYDVVGPVCESGDWLGRDRSLA-VQPGDVLAILSAGAYGFTMSSNYNTR 385 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D A + D Sbjct: 386 NRAAEVIVDGDKVHLARERECFEDLIR 412 >gi|170719432|ref|YP_001747120.1| diaminopimelate decarboxylase [Pseudomonas putida W619] gi|169757435|gb|ACA70751.1| diaminopimelate decarboxylase [Pseudomonas putida W619] Length = 415 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 58/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRSYTDALQGVEHLVCFAVKANSNLGVLNVLARMGAGFDIVSGGE 85 Query: 63 VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G + ++ ++ A+ + +L + + A ++ K Sbjct: 86 LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEMGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDCHIGSQLT 205 Query: 171 SFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 + F L ++ + + LGGG+ +D +K E+ Sbjct: 206 TVEPFLDALDRLLDLVDRLADCGIHLRHLDLGGGVGVRYRDEEPPLVADYIKAIRERVGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280 + + EPG IV N L T V + I+D+++ + L A Sbjct: 266 RDLALVFEPGRYIVANAGALLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMGVSAV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD + + GD ++ + Y + +N Sbjct: 326 TPREGEGRAYDLVGPICETGDFLAKDRQL-NLAEGDLLAVQSAGAYGFVMSSNYNTRGRC 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + R + + Y Sbjct: 385 AEILVDGDQAFEVRRRETIAELYA 408 >gi|316936209|ref|YP_004111191.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris DX-1] gi|315603923|gb|ADU46458.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris DX-1] Length = 421 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 56/389 (14%), Positives = 106/389 (27%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHYRVFTEAFAGLDALVCYAMKANSNQSVLRTLARLGAGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ K D + + +L A + + Sbjct: 85 ELQRALAAGIPPGKIVFSGVGKTEAELRAALAHDIKCLNVESEPELELLSRLAVETGRTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 LR+NP V + ++ G + E + V G+ H + Sbjct: 145 RISLRVNPDVDSGTHAKISTGKSENKFGIPIRHAREVYARAARLPGIQVTGVDVHIGSQI 204 Query: 170 KSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 + + + GGG+ + + + +K Sbjct: 205 IDLAPMEAAFRKVAEFVHVLRGDGHTVSHVDFGGGLGIPYYEDRDAPPEPFAYAEMVKRV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + EPG IV N L V+ + + K VI+D+++ + L Sbjct: 265 THNLGCALLFEPGRMIVGNAGILVARVIYVKHGDGKTFVIIDAAMNDLIRPTLYEAYHEI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + A V G C GD +K GD I+ Y + +N Sbjct: 325 VAVQQPAPGAASMVADVVGPVCETGDYLALDRKLPELKAGDLIAIMTSGAYGAVQACTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D F+ Sbjct: 385 TRPLVPEVLVKDDQVAVVRPRFTVEQLIA 413 >gi|325266603|ref|ZP_08133280.1| diaminopimelate decarboxylase [Kingella denitrificans ATCC 33394] gi|324982046|gb|EGC17681.1| diaminopimelate decarboxylase [Kingella denitrificans ATCC 33394] Length = 407 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 119/386 (30%), Gaps = 26/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + +L + A+K + + + G + S E Sbjct: 17 GTPLYVYSENELTQAYARYQTAFVALNPLICYAVKANSNLSIIRHFARLGSGFDTVSGGE 76 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K N ++ +L++ AQ+L Sbjct: 77 IARVLAAGGSADKIIFSGVGKSEVEIEFALNAGIKCFNVESLPELDRINAVAQRLGKTAP 136 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LRINP V ++ G D ++ + G+ H + Sbjct: 137 VSLRINPDVDAKTHPYISTGLKANKFGIAMADAEQAYRHAGSLHHLRIVGIDCHIGSQLM 196 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + + + +E I LGGGI ++ + + ++ Sbjct: 197 DLSPLIEACERLLQLTDRLAGQGIVLEHIDLGGGIGIAYQNEQSPDLAAYAAAVQTLLAG 256 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + LEPG ++V N TL T V + KN VIVD+++ + LYQ I Sbjct: 257 RPQSLVLEPGRSLVGNAGTLLTRVEYVKRGEEKNFVIVDAAMNDLMRPA-LYQAYHNIEN 315 Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 A + G C GD + GD + Y + + +N Sbjct: 316 AETSERQPVFLADIVGPICETGDFLARDRMIS-AQAGDLLLVRSAGAYASSMASNYNTRG 374 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D ++ D + Sbjct: 375 RAAEVLVSGDKVRLIRPRETWEDVFA 400 >gi|307565290|ref|ZP_07627783.1| carboxynorspermidine decarboxylase [Prevotella amnii CRIS 21A-A] gi|307345959|gb|EFN91303.1| carboxynorspermidine decarboxylase [Prevotella amnii CRIS 21A-A] Length = 394 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 120/375 (32%), Positives = 194/375 (51%), Gaps = 14/375 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++ KL NL I A V+++LA K +A W F +Y++ TT+SSL E Sbjct: 20 PMYVLEEDKLRKNLSLIANIANKASVEIILAFKAYALWKTFPIFREYINATTASSLNEAR 79 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRI 122 LG E+FG H ++ AY D EI ++ + FN++ Q ++ KA +G+R+ Sbjct: 80 LGLEEFGTPCHTFSPAYTDYEIKDIVKCSSHLTFNSLQQYERYHLKARAYNKKISLGIRV 139 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S K +L +P P +R G K+ E ++ G H +CEN S F L +I Sbjct: 140 NPEYSEIKTLLYNPCAPGTRFGILAKNIPEKLPSDIEGFHIHCHCENGS-DVFERTLAHI 198 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E++F + +Q++WI+ GGG T +Y + L+ F +Y ++ LEPG A Sbjct: 199 EEKFAVWFSQLKWINFGGGHLMTHANYNIDKLINILQGFHNRYPWLKVILEPGSAFGWQV 258 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG---------PYTAM 291 TL + V+DI E+ + + S AH+PD L + + P+T Sbjct: 259 GTLVSQVVDIIEDRGYRTAILNVSFTAHMPDCLEMPYNPIVRGAETQPNSGKTTDPFTYR 318 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCL+GD G + F+ ++IG+ I FED+ Y + N FNGI+ P IA+ + + + Sbjct: 319 LGGNSCLSGDWMGNWKFDHKLQIGENIIFEDMLHYTTVKTNTFNGISHPAIALLHSNKDL 378 Query: 352 KAIREFSYNDYYNNL 366 + +R +SY DY + + Sbjct: 379 EILRTYSYEDYRDRM 393 >gi|121635635|ref|YP_975880.1| diaminopimelate decarboxylase [Neisseria meningitidis FAM18] gi|120867341|emb|CAM11112.1| diaminopimelate decarboxylase [Neisseria meningitidis FAM18] gi|325131386|gb|EGC54095.1| diaminopimelate decarboxylase [Neisseria meningitidis M6190] gi|325137467|gb|EGC60053.1| diaminopimelate decarboxylase [Neisseria meningitidis ES14902] gi|325204928|gb|ADZ00382.1| diaminopimelate decarboxylase [Neisseria meningitidis M01-240355] Length = 414 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + I +E + LGGG+ +D V D + Q +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + N G R + N Sbjct: 377 AEVLVNGGGYKLIRRRETLEQQMAN 401 >gi|319409711|emb|CBY90016.1| diaminopimelate decarboxylase (DAP decarboxylase) [Neisseria meningitidis WUE 2594] Length = 414 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFENYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ +D + + + +++ Sbjct: 198 DLSPLIEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDENVPDLGAYARAVQKLMGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T P TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGSSMASNYNTRNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + R + N Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401 >gi|148978918|ref|ZP_01815238.1| carboxynorspermidine decarboxylase [Vibrionales bacterium SWAT-3] gi|145962116|gb|EDK27402.1| carboxynorspermidine decarboxylase [Vibrionales bacterium SWAT-3] Length = 377 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 168/368 (45%), Positives = 241/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS Y Sbjct: 6 LKTPYFMINEDKLVANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LGHE FGGETHAY+V Y + ++ V CD +IFN+ SQ ++ + +GLR Sbjct: 66 EVRLGHETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQFEAYRHIVEGKA-SLGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + +NG+MFH NCENK F +L + Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDEINGVMFHMNCENKDVDAFIGLLDS 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FG + +++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISEQFGEHLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A++ G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHDYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F E F++P+KIG ++ D AGY + + NWFNG+ MP+I + +G ++ + EF Y Sbjct: 305 GDQFCETSFDEPLKIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYCERSNGEVQKLNEFGY 364 Query: 360 NDYYNNLS 367 D+ +LS Sbjct: 365 QDFKRSLS 372 >gi|218767449|ref|YP_002341961.1| diaminopimelate decarboxylase [Neisseria meningitidis Z2491] gi|13124075|sp|Q9JWA6|DCDA_NEIMA RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|121051457|emb|CAM07750.1| diaminopimelate decarboxylase [Neisseria meningitidis Z2491] Length = 406 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + I +E + LGGG+ +D V D + Q +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 EPKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + R + N Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401 >gi|207721858|ref|YP_002252296.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum MolK2] gi|206587025|emb|CAQ17609.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum MolK2] Length = 407 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 116/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L N + ++ A+K + + Q G S E Sbjct: 15 GTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 74 Query: 63 VMLGHEKFGG--ETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G + V D A+ + ++ +L++ + A L Sbjct: 75 LRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 134 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G ++ + V G+ H + Sbjct: 135 VSLRVNPDVDAKTHPYISTGLKGNKFGVAFEEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 194 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + ++ ++ I +GGG+ T D D + ++ Sbjct: 195 EVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 254 Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 + + EPG ++V N L T V + + D+++ + Sbjct: 255 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 314 Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G C +GD G V+ GD ++ Y + +N Sbjct: 315 VPVRERSGAATVYDVVGPVCESGDWLGRDRAL-DVQPGDLLAILSAGAYGFTMSSNYNTR 373 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D A + D Sbjct: 374 NRAAEVIVDGDRVHVARERERFEDLIR 400 >gi|148978773|ref|ZP_01815153.1| diaminopimelate decarboxylase [Vibrionales bacterium SWAT-3] gi|145962194|gb|EDK27478.1| diaminopimelate decarboxylase [Vibrionales bacterium SWAT-3] Length = 417 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 113/378 (29%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S E Sbjct: 27 GTPLYVYSRATLERHWNAFDSSVGEHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ N + +L + A +L Sbjct: 87 LERVVAAGGDPAKVVFSGVGKTAAEMKRALELNIKCFNVESEPELERLNKVAGELGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LRINP V + ++ G ++G+ H + Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYAFAQTLENLSIHGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + I+ + +GGG+ P L Sbjct: 207 DIEPFIDATDRLLALIDQLRADGINIKHLDVGGGLGVVYRDELPPQPSDYAKALLARLEN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HSDLELIFEPGRAIAANAGVLLTKVEFLKPTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I T + G C GD G+ ++ GD ++ Y + +N + Sbjct: 327 VIPRQGEAVTYDLVGPICETGDFLGKDRELV-LEEGDLLAVRSAGAYGFVMSSNYNTRSR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + T + Sbjct: 386 AAEVMVDGNKTHLVRQRE 403 >gi|189463104|ref|ZP_03011889.1| hypothetical protein BACCOP_03814 [Bacteroides coprocola DSM 17136] gi|189430083|gb|EDU99067.1| hypothetical protein BACCOP_03814 [Bacteroides coprocola DSM 17136] Length = 374 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 121/374 (32%), Positives = 188/374 (50%), Gaps = 17/374 (4%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 +++ L NL + + AGV+++LA K FA W F +Y+ TT+SS YE L E Sbjct: 1 MEEDLLRKNLSLIKSVAERAGVEIILAFKAFAMWKSFPIFREYIHYTTASSEYEARLAFE 60 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGLRINPSV 126 +FG + H Y+ AY + A L I FN++SQ +F KA H G+R+NP Sbjct: 61 EFGSKAHTYSPAYTETNFPAFLKYSSHITFNSLSQFERFYPQAKAYPEHVSCGIRVNPEY 120 Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 S + L +P P +R G + + + G H +CE+ S+ LK+IE++F Sbjct: 121 SEVEVELYNPCAPGTRFGVTADLLPDRLPEGIEGFHCHCHCESSSYE-LERTLKHIEEKF 179 Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLN 245 + Q++W++LGGG T KDY V+ LK E+Y QI LEPG A T L Sbjct: 180 SRWFPQLKWLNLGGGHLMTRKDYDVEHLIGLLKGLRERYPNLQIILEPGSAFTWQTGPLV 239 Query: 246 TTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG------------PYTAMV 292 +V+D+ E+ + D S H+PD L + + + Sbjct: 240 ASVVDVVESRGIRTAILDVSFTCHMPDCLEMPYQPKVRNAETLPPDAVKTAAREDHVYRL 299 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P++A+ + DG ++ Sbjct: 300 GGNSCLSGDYMGSWKFDHELQIGERIIFEDMIHYTMVKTNMFNGIHHPSVALLHTDGELE 359 Query: 353 AIREFSYNDYYNNL 366 + F Y DY + + Sbjct: 360 VYKTFRYEDYRDRM 373 >gi|288941801|ref|YP_003444041.1| diaminopimelate decarboxylase [Allochromatium vinosum DSM 180] gi|288897173|gb|ADC63009.1| diaminopimelate decarboxylase [Allochromatium vinosum DSM 180] Length = 423 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 117/385 (30%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + ++ + ++K + + + L + G S+ E Sbjct: 26 GTPCYVYSRATLERHWRAFERAFRDHPHLICFSVKSNSNLAVLNVLARLGSGFDIVSVGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K D A+ + S+L + A +L Sbjct: 86 LERVLAAGGDPARVVFSGVGKRADEIRRALEVGIRCFNVESESELTRIDRIAGELGVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G ++ V G+ H + Sbjct: 146 VSLRVNPDVDPQTHHYISTGLKENKFGIDIQEAESVYALAAAMPNLKVVGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 F L + IE + LGGG+ ++ + + Sbjct: 206 DLAPFIDALGRVLALADRLCASGIAIEHLDLGGGLGIRYREEHPPEPAAYAAAMSHLLAD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++ LEPG AIV N L T V + K+ I+D+++ + L + Sbjct: 266 RPYEVILEPGRAIVGNAGVLLTQVEYLKHGPHKHFAILDAAMNDLLRPALYQAGHEIVRV 325 Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P + G C GD G+ ++ GD ++ Y + +N Sbjct: 326 VQETDADPSRYDLVGPVCETGDFLGKDRTLA-LEEGDLVAVRGAGAYGFTMSSNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D D Y Sbjct: 385 AAEVMVDGDRAYLVRAREQVADLYA 409 >gi|224373130|ref|YP_002607502.1| diaminopimelate decarboxylase [Nautilia profundicola AmH] gi|223589760|gb|ACM93496.1| diaminopimelate decarboxylase [Nautilia profundicola AmH] Length = 400 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 65/384 (16%), Positives = 114/384 (29%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D N + K + A+K + + G S+ E Sbjct: 11 GTPLYVYDFHHFENQFNELKNAFKGRKSIISYAVKANSNLSVIKKFATLGSGADCVSIGE 70 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 V ++ K + D I + ++LN+ D A+KL Sbjct: 71 VKRALMAGVDRYKVIFSGVGKRDDEIEEALKLDILMINVESEAELNRVADIAEKLGVVAR 130 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + R+NP++ ++ G + + N G+ FH + Sbjct: 131 ISIRVNPNIDPKTHPYISTGLHENKFGVDIDTAKKMYLFAKNNSSLNPVGIHFHIGSQLT 190 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 ++ ++ + I++ +GGG+ KD D+ Q + Sbjct: 191 ELEPIKEASQIVADLVRSLKAINIDIKFFDVGGGLGIKYKDEETIKPYDYAQAILSTLSG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 V I EPG +V N T+VL K VIVD ++ + L Sbjct: 251 LDVTIVCEPGRFLVGNGGWFLTSVLYEKVNGDKRFVIVDGAMNDLIRPSLYNAYHKIEVI 310 Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 A + G C +GD F + GD + Y + +N Sbjct: 311 TDKNGEISKANLVGPICESGDFFAKDIELPSTNHGDLVVIHSAGAYGFTMSSNYNTRPRA 370 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 R ++ D Sbjct: 371 AEIAVENGEDRIIRRRETFEDLIA 394 >gi|239827592|ref|YP_002950216.1| diaminopimelate decarboxylase [Geobacillus sp. WCH70] gi|239807885|gb|ACS24950.1| diaminopimelate decarboxylase [Geobacillus sp. WCH70] Length = 439 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 124/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + GVK + A K F++ M + S Sbjct: 30 GTPLYIYDVALIRERARGFKEAFQKHGVKAQVAYASKAFSSIAMVQLAEEEGLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E ++ +D + A+ + I+ + +L + + Sbjct: 90 GELYTALQAGFPPERIHFHGNNKSRDELMMALENGVGCIVVDNFYELELLEQLSKQYGKK 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I LR+ P V + S+ G E + + S +V G+ H Sbjct: 150 TAILLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEALQKALSSLSFSVLGIHCHIG 209 Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + L + + I + ++LGGG Sbjct: 210 SQIFETTGFVLAAQKIFQKIAHWKETYGFIPTVVNLGGGFGIRYTSDDDPIPVSEYVDQI 269 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K+ + + ++ + ++EPG ++V + T ++ + V + ++ Sbjct: 270 VEEVKKQASEKNIPMPEIWIEPGRSLVGDAGTTIYSIGSRKDVPNVRHYVAVDGGMSDNI 329 Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N + G+ C +GD+ GD ++ Sbjct: 330 RPALYDAKYEAVLANRVLDEKNEIVAIAGKCCESGDMLIWDLPLPKASPGDYLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + ++ +Y D Sbjct: 390 YGYSMANNYNRIPRPAVVFVENGEAQLVVKRETYEDLVR 428 >gi|37196770|dbj|BAC92756.1| diaminopimelate decarboxylase [Methylophilus methylotrophus] Length = 414 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 66/384 (17%), Positives = 124/384 (32%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ + L + + A+K + + + + G S E Sbjct: 26 QTPTYVYSRAALTTAFERFQAGLTGHDHLICFAVKANPSLAILNLFARMGAGFDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ + +V++L++ + A L Sbjct: 86 LARVLAAGGDPKKVVFSGVGKSHAEIKAALEAGILCFNVESVNELDRIQQVAASLGKKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP+V ++ G +D + V+G+ H + Sbjct: 146 ISLRVNPNVDAKTHPYISTGLKNNKFGVAFEDALGLYEKAAQLPNIEVHGVDCHIGSQIT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 F L + I+ I +GGG+ T D DF +K Sbjct: 206 ELSPFLDALDKVLGLVDALAAKGIHIQHIDVGGGVGITYSDETPPDFAAYTAAILKKLAG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +V++ EPG A+V N L T V + KN IVD+++ + L Sbjct: 266 RNVKVLFEPGRALVGNAGVLLTKVEYLKPGETKNFAIVDAAMNDLMRPALYDAFHNITTI 325 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T + G C +GD G ++ GD ++ Y ++ + +N Sbjct: 326 ATSAAPAQIYEIVGPVCESGDFLGHDRTLA-IEEGDYLAIHSAGAYGMSMASNYNTRARA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D D + Sbjct: 385 AEVLVDGDQVHVIREREQIADLFK 408 >gi|262274406|ref|ZP_06052217.1| carboxynorspermidine decarboxylase putative [Grimontia hollisae CIP 101886] gi|262220969|gb|EEY72283.1| carboxynorspermidine decarboxylase putative [Grimontia hollisae CIP 101886] Length = 380 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 171/368 (46%), Positives = 242/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY+LI++ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFLIEEDKLIENLEKAKRLKELSGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + IGLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVRDVADICDKMIFNSQSQLTAYRHLVEGKAS-IGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG +NG+MFH NCENK F+++L Sbjct: 125 LNPGVSYAGQDLANPARRFSRLGVHFDQIDPGIFATLNGVMFHMNCENKDVDAFTSLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FG ++ Q+EW+SLGGG+ FT Y ++ LK F E++ VQ+YLEPGEAI+T T Sbjct: 185 ISEKFGSYLNQLEWVSLGGGVFFTWPGYDLEKLAAALKAFGERHGVQLYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y E A+I +TG +T ++ SCLA Sbjct: 245 TDLVVTVVDIVENEVKTAIVDSATEAHRLDTLIYNEPASIAEANDTGEHTYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F +F+ P+K+G R+ D AGY + + NWFNG+ MP++ + +G I+ + EF Y Sbjct: 305 GDQFCVANFDHPLKVGQRLHIMDSAGYTMVKLNWFNGLRMPSVYCRRSNGKIQLLNEFDY 364 Query: 360 NDYYNNLS 367 D+ +LS Sbjct: 365 QDFKRSLS 372 >gi|223038682|ref|ZP_03608975.1| diaminopimelate decarboxylase [Campylobacter rectus RM3267] gi|222880084|gb|EEF15172.1| diaminopimelate decarboxylase [Campylobacter rectus RM3267] Length = 413 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 67/397 (16%), Positives = 119/397 (29%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + + + + A+K + + L G S+ E Sbjct: 11 GTPLYIYDFDYMAHRYEALKNAFHARKSLVCYAVKANSNLSVLKFLAGLGAGFDCVSVGE 70 Query: 63 VMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119 V + V +D E+ L N I + +++N+ + A++L K Sbjct: 71 VRRALLAGAKSYQIILSGVGKRDDELKFALENEILMINLESEAEMNRLESIAKQLDKPAR 130 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 + R+NP + ++ G + S G+ H + Sbjct: 131 ISIRVNPDIDAKTHPYISTGLNENKFGVDPQTAKKMYLHAKNSPYLEPVGIHSHIGSQLT 190 Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 K + I++ +GGG+ D + ++ Q + Sbjct: 191 DVWPLIEAAKTVANLTRELKAVQIDIKFFDVGGGLGIIYGDESEPDLYEYAQGILANLSG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 V + EPG I N T+VL K VIVD ++ + LYQ I+ Sbjct: 251 LDVTVVCEPGRFIAGNAGYFLTSVLYEKFNKDKRFVIVDGAMNDLIRPS-LYQARHKIFA 309 Query: 284 NTGPY----------------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 +G V G C +GD + P+ GD + + Y Sbjct: 310 LSGGEIFDECKKEQLKELKFSPCDVVGPICESGDFLAKDRNLPPLNPGDLVVIKSAGAYG 369 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N R S+ D Sbjct: 370 FAMSSNYNTRGRVAEVAVKGGEDFLIRRRESFEDIVA 406 >gi|240013231|ref|ZP_04720144.1| hypothetical protein NgonD_01030 [Neisseria gonorrhoeae DGI18] gi|240015677|ref|ZP_04722217.1| hypothetical protein NgonFA_00668 [Neisseria gonorrhoeae FA6140] gi|240120302|ref|ZP_04733264.1| hypothetical protein NgonPI_00705 [Neisseria gonorrhoeae PID24-1] Length = 406 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTGAFENYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKIAARLGKTAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ KD + + + +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDEGVPDLGAYARAVQKLMGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T P TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKNIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNTRNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + G R + N Sbjct: 377 AEVLVDGGGYKLIRRRETLEQQMAN 401 >gi|59802399|ref|YP_209111.1| hypothetical protein NGO2098 [Neisseria gonorrhoeae FA 1090] gi|239998049|ref|ZP_04717973.1| hypothetical protein Ngon3_00993 [Neisseria gonorrhoeae 35/02] gi|240079813|ref|ZP_04724356.1| hypothetical protein NgonF_00641 [Neisseria gonorrhoeae FA19] gi|240114768|ref|ZP_04728830.1| hypothetical protein NgonPID1_00673 [Neisseria gonorrhoeae PID18] gi|240116968|ref|ZP_04731030.1| hypothetical protein NgonPID_00658 [Neisseria gonorrhoeae PID1] gi|240122606|ref|ZP_04735562.1| hypothetical protein NgonP_01441 [Neisseria gonorrhoeae PID332] gi|240124794|ref|ZP_04737680.1| hypothetical protein NgonSK_00970 [Neisseria gonorrhoeae SK-92-679] gi|240127312|ref|ZP_04739973.1| hypothetical protein NgonS_01425 [Neisseria gonorrhoeae SK-93-1035] gi|260441419|ref|ZP_05795235.1| hypothetical protein NgonDG_10117 [Neisseria gonorrhoeae DGI2] gi|268593898|ref|ZP_06128065.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae 35/02] gi|268595955|ref|ZP_06130122.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae FA19] gi|268600416|ref|ZP_06134583.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID18] gi|268602648|ref|ZP_06136815.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID1] gi|268681197|ref|ZP_06148059.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID332] gi|268683367|ref|ZP_06150229.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae SK-92-679] gi|268685676|ref|ZP_06152538.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae SK-93-1035] gi|291044781|ref|ZP_06570490.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae DGI2] gi|293397871|ref|ZP_06642077.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae F62] gi|59719294|gb|AAW90699.1| putative diaminopimelate decarboxylase [Neisseria gonorrhoeae FA 1090] gi|268547287|gb|EEZ42705.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae 35/02] gi|268549743|gb|EEZ44762.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae FA19] gi|268584547|gb|EEZ49223.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID18] gi|268586779|gb|EEZ51455.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID1] gi|268621481|gb|EEZ53881.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID332] gi|268623651|gb|EEZ56051.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae SK-92-679] gi|268625960|gb|EEZ58360.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae SK-93-1035] gi|291011675|gb|EFE03671.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae DGI2] gi|291611817|gb|EFF40886.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae F62] gi|317165492|gb|ADV09033.1| hypothetical protein NGTW08_2082 [Neisseria gonorrhoeae TCDC-NG08107] Length = 406 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTGAFENYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKIAARLGKTAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ KD + + + +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDEGVPDLGAYARAVQKLMGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T P TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKNIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNTRNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + G R + N Sbjct: 377 AEVLVDGGGYKLIRRRETLEQQMAN 401 >gi|258621933|ref|ZP_05716963.1| carboxynorspermidine decarboxylase [Vibrio mimicus VM573] gi|258585871|gb|EEW10590.1| carboxynorspermidine decarboxylase [Vibrio mimicus VM573] Length = 377 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 166/368 (45%), Positives = 244/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVKEVVDICDKMIFNSQSQLAAYRHLVEGKA-SLGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + ES + ++G+MFH NCENK F ++L Sbjct: 125 INPGVSYAGQDLANPARKFSRLGVQADHIDESVFETIDGVMFHMNCENKDVDAFISLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V LK FSE++ VQ+YLEPGEA++T T Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVDKLGVALKAFSERHGVQLYLEPGEAVITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+K+G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 305 GDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERQNGEIQKINQFGY 364 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 365 EDFKRTLS 372 >gi|313669199|ref|YP_004049483.1| diaminopimelate decarboxylase [Neisseria lactamica ST-640] gi|313006661|emb|CBN88127.1| diaminopimelate decarboxylase [Neisseria lactamica 020-06] Length = 406 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYRDENVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIESV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + G R + N Sbjct: 377 AEVLVDGSGYKLIRRRETLEQQMAN 401 >gi|261378590|ref|ZP_05983163.1| diaminopimelate decarboxylase [Neisseria cinerea ATCC 14685] gi|269144922|gb|EEZ71340.1| diaminopimelate decarboxylase [Neisseria cinerea ATCC 14685] Length = 406 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G +T V + EI+ A+ + ++ ++++ + A +L K Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLSKTAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEHVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + N G R + N Sbjct: 377 AEVLVNGGGYKLIRRRETLEQQMAN 401 >gi|254454697|ref|ZP_05068134.1| diaminopimelate decarboxylase [Octadecabacter antarcticus 238] gi|198269103|gb|EDY93373.1| diaminopimelate decarboxylase [Octadecabacter antarcticus 238] Length = 421 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 116/390 (29%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ LL + + A+K + + L G S Sbjct: 25 VGTPFYVYSTATLLRHFKLFDDALSGMDHLVCFAVKSLSNVAVLKLLGDAGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E + G+ ++ ++ A+ + ++ A L+ Sbjct: 85 EYLRAKAAGVSGDKIVFSGIGKTREEMRLALEGGIRQFNVESEPEMEALSQVALSLNTVA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + R+NP V + + G E V G+ H + Sbjct: 145 PITVRVNPDVDAKTHAKISTGKKEDKFGIPISRAREVYAMAAKLPGLKVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221 F + + + + I + LGGG+ +++ +KE Sbjct: 205 TELEPFRLAYRKVAELTEQLRSDGHDITRLDLGGGLGIPYARDNNAPPLPREYGALIKEE 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N L V+ + + +IVD+++ V + Sbjct: 265 VGHLGCEIEIEPGRLISGNAGLLVAKVIYVKSGEDREFLIVDAAMNDLVRPAMYDAWHDI 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C +GD F + P+ + F Y+ + +N Sbjct: 325 VPVIEPAAGVDQTPYDVVGPICESGDTFAKGRMLPPLDPEALVGFRSAGAYSAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + N D R ++ D N Sbjct: 385 SRPLIPEVLVNGDQFAVIRRRPTFEDMINR 414 >gi|315637685|ref|ZP_07892890.1| carboxynorspermidine decarboxylase [Arcobacter butzleri JV22] gi|315478032|gb|EFU68760.1| carboxynorspermidine decarboxylase [Arcobacter butzleri JV22] Length = 382 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 143/371 (38%), Positives = 218/371 (58%), Gaps = 7/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ +++ L NL ++ A + +LLALK FA FD +Y+ G +S L+ Sbjct: 14 LPSPAYVCEEELLEKNLKLLKRVQDEADISILLALKGFAMHSTFDLCKKYLKGCCASGLH 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E +L E+FGGE H Y+ A+KD EID +++ + ++FN+ SQL +FKDKA +G+R Sbjct: 74 EAILAKEEFGGEVHTYSPAFKDEEIDEIVAISNHLVFNSFSQLKRFKDKAYGKVS-LGIR 132 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S + L +P P+SR+G + ES+++ ++G FH CE LK Sbjct: 133 LNPEYSSVEVDLYNPCAPYSRMGITKANFDESQLQFLDGFHFHALCEQN-VDALEGALKA 191 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 EK F + +++W++ GGG H T DY V+ + LK+F +Y ++Y+EPGEAI Sbjct: 192 FEKNFSQYFDRLKWVNFGGGHHITRADYDVEGLIKLLKDFKSRYPHLKVYMEPGEAIGWQ 251 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 T L TVLDI N +L I+D+S EAH+PD L A I N PYT G + Sbjct: 252 TGYLVATVLDIVHNGMDLAILDTSAEAHMPDTLAMPYRAMIRNSGLANEKPYTYRFGGNT 311 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL+GDI G++ F++P+K+GD+I ED+ Y + + FNGI +P+I +KN + + K ++ Sbjct: 312 CLSGDIIGDYSFDEPLKVGDKIILEDMIHYTMVKTTTFNGIKLPSIVIKNKENSYKIVKN 371 Query: 357 FSYNDYYNNLS 367 F YNDY LS Sbjct: 372 FGYNDYKMRLS 382 >gi|325206881|gb|ADZ02334.1| diaminopimelate decarboxylase [Neisseria meningitidis M04-240196] Length = 406 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 129/385 (33%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 ++ G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LVRVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LRINP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ KD + + Q +++ Sbjct: 198 DLSPLIEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDESVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T P TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKNISPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + R + N Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401 >gi|154147876|ref|YP_001406852.1| diaminopimelate decarboxylase [Campylobacter hominis ATCC BAA-381] gi|153803885|gb|ABS50892.1| diaminopimelate decarboxylase [Campylobacter hominis ATCC BAA-381] Length = 412 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 58/396 (14%), Positives = 117/396 (29%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + + + A+K + + L G S+ E Sbjct: 11 GTPLYIYDFDYIKSRYLALKNAFSARKSLVCFAVKANSNLSVLKFLANLGSGFDCVSIGE 70 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 V ++ + +A+ +N I + +++ + ++ A++L K+ Sbjct: 71 VRRALLAGANAYKIIFSGVGKKDEELKEALQNNILMINLESPAEMLRLENIAKELKKQAR 130 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + R+NP+V ++ G + + + G+ FH + Sbjct: 131 ISIRVNPNVDAKTHPYISTGLNENKFGVEISEAKKMYLYAKKSEWLQPYGIHFHIGSQLT 190 Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I++ +GGGI ++ D+ Q + + Sbjct: 191 ELAPIIEAANIVSNIMSELKALEIDIKFFDVGGGIGVIYENENEISLYDYAQGILGALKG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 V + EPG + N T VL + K VIVD ++ + L Sbjct: 251 QDVTVICEPGRFLTANAGVFLTKVLYQKLNSKKRFVIVDGAMNDLIRPSLYNAHHGISVV 310 Query: 284 NTGP---------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + A V G C + D + +K GD + + Y Sbjct: 311 SKQNGEISNENSVQNLNEISKADVVGPICESSDFLAKNVDLPELKNGDLLLVKSAGAYGF 370 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N R S+ Sbjct: 371 SMSSNYNSRLRCAEVALENGTDRLIRRRESFEYLIA 406 >gi|325133435|gb|EGC56099.1| diaminopimelate decarboxylase [Neisseria meningitidis M13399] Length = 406 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 64/385 (16%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +++ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALKAYRHVAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I + +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLVEACERILVLVDQLADEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 EPKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + R + N Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401 >gi|78357021|ref|YP_388470.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219426|gb|ABB38775.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 415 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 114/384 (29%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + ++K + + L + G S E Sbjct: 26 GTPLYIYSKATFQRHFTAFDSAFGALPHLTCYSVKACSNMHILRFLGKMGAGMDIVSGGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + Y+ K A+ + ++ +L K + A + Sbjct: 86 LFRALRAGIQPAKIVYSGVGKTRTEILQALEAGILMFNVESMGELEKISEVANQTGHTAN 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170 + LRINP V ++ G + + ++ + G+ H + Sbjct: 146 VALRINPDVDPHTHPYISTGLKENKFGLDMEQSYAAYMRAMELPAITPMGIDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 S F ++ ++ I++I LGGG+ F + L + Sbjct: 206 SLSPFREAVEKILLFREKLCSAGLCIDYIDLGGGLGIPYDTEEPPHPQEFGKLLTDMLSG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY- 282 + + LEPG I N L T V + K VIVD+++ + L Sbjct: 266 LGITLILEPGRVIAGNAGILVTKVQYTKKTATKEFVIVDAAMNDLIRPSLYQSHHHIAEV 325 Query: 283 --PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 +T V G C +GD V+ + ++ Y + +N Sbjct: 326 SPRGRAKHTVDVVGPICESGDFLARDRLMPAVEPRELLAVFSAGAYGFTMSSQYNSRPRA 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + D R +Y D Sbjct: 386 AEVLVRGDTAHLIRRRETYEDLIA 409 >gi|207744536|ref|YP_002260928.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum IPO1609] gi|206595942|emb|CAQ62869.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum IPO1609] Length = 407 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 115/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L N + ++ A+K + + Q G S E Sbjct: 15 GTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 74 Query: 63 VMLGHEKFGG--ETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G + V D A+ + ++ +L++ + A L Sbjct: 75 LRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 134 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G ++ + V G+ H + Sbjct: 135 VSLRVNPDVDAKTHPYISTGLKGNKFGVAFEEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 194 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + + ++ I +GGG+ T D D + ++ Sbjct: 195 EVSPYLDAIDKVLDVVARLDGEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 254 Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 + + EPG ++V N L T V + + D+++ + Sbjct: 255 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 314 Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G C +GD G V+ GD ++ Y + +N Sbjct: 315 VPVRERSGAATVYDVVGPVCESGDWLGRDRAL-DVQPGDLLAILSAGAYGFTMSSNYNTR 373 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D A + D Sbjct: 374 NRAAEVIVDGDRVHVARERERFEDLIR 400 >gi|83748189|ref|ZP_00945216.1| Diaminopimelate decarboxylase [Ralstonia solanacearum UW551] gi|83725157|gb|EAP72308.1| Diaminopimelate decarboxylase [Ralstonia solanacearum UW551] Length = 419 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 115/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L N + ++ A+K + + Q G S E Sbjct: 27 GTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 86 Query: 63 VMLGHEKFGG--ETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G + V D A+ + ++ +L++ + A L Sbjct: 87 LRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G ++ + V G+ H + Sbjct: 147 VSLRVNPDVDAKTHPYISTGLKGNKFGVAFEEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 206 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + + ++ I +GGG+ T D D + ++ Sbjct: 207 EVSPYLDAIDKVLDVVARLDGEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 266 Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 + + EPG ++V N L T V + + D+++ + Sbjct: 267 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 326 Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G C +GD G V+ GD ++ Y + +N Sbjct: 327 VPVRERSGAATVYDVVGPVCESGDWLGRDRAL-DVQPGDLLAILSAGAYGFTMSSNYNTR 385 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D A + D Sbjct: 386 NRAAEVIVDGDRVHVARERERFEDLIR 412 >gi|197302665|ref|ZP_03167719.1| hypothetical protein RUMLAC_01395 [Ruminococcus lactaris ATCC 29176] gi|197298247|gb|EDY32793.1| hypothetical protein RUMLAC_01395 [Ruminococcus lactaris ATCC 29176] Length = 404 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 127/380 (33%), Positives = 199/380 (52%), Gaps = 16/380 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ID+ +L N L + + G K+LLA K F+ + + L Y+ GT +S LY Sbjct: 23 LPSPSYVIDETQLECNGFCLLAVAERTGCKVLLAQKAFSNYNFYPLLEPYLAGTEASGLY 82 Query: 62 EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E LG E+ GG E H + AY++ E D +L D I+FN+ QL K ++A+ K IGL Sbjct: 83 EARLGKEEMGGKEVHVFCAAYREDEFDELLEYADHIVFNSPGQLKKLGERAKAQGKSIGL 142 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNV----NGLMFHNNCENKSFLCF 175 R+NP S + DP P SRLG + + +++ +G+ FH CE Sbjct: 143 RVNPECSTQDGHDIYDPCAPGSRLGTTREQWNQEMTEDLISLLDGIHFHTLCEQN-ADAL 201 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 ++ +E +FG + +++W++LGGG H T DY + L +K+ VQ+YLEPGE Sbjct: 202 EVTMRAVEDKFGDILPRMKWVNLGGGHHITRHDYERSRLEELLLSIKKKWDVQVYLEPGE 261 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGP------- 287 A+ N L + VLDI +N + + + D+S H+PD L IY Sbjct: 262 AVALNAGYLVSRVLDIVKNGETQIAILDASAACHMPDVLEMPYQPPIYNAAKQPDEGGQY 321 Query: 288 -YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + + G +CLAGD+ G+++F K +K GD + F D+A Y + N FNG+ +P I Sbjct: 322 QHRYRLAGPTCLAGDVIGDYYFPKELKAGDMVIFGDMAIYTTCKNNTFNGMPLPDIWSLG 381 Query: 347 VDGTIKAIREFSYNDYYNNL 366 + G ++ + F Y D+ L Sbjct: 382 MQGRLEQVTAFGYQDFKTRL 401 >gi|149202882|ref|ZP_01879853.1| diaminopimelate decarboxylase [Roseovarius sp. TM1035] gi|149143428|gb|EDM31464.1| diaminopimelate decarboxylase [Roseovarius sp. TM1035] Length = 421 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 56/390 (14%), Positives = 117/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL G S Sbjct: 25 VGTPFYCYSTATLSRHFRLFDEALAGMDHLVCYAMKAASNQAILKTLAGLGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E GE ++ +D A++ + ++ A +L Sbjct: 85 EYARARAAGVPGERIVFSGVGKTRDEMRMALIGGIRQFNVESEPEMAVLNAVALELGLRA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 I +R+NP V + ++ G E + V G+ H + Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYAQAAALPGLEVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + I + LGGG+ ++ ++E Sbjct: 205 TELAPFRLAYEKVAELTQVLRADGHDIRRLDLGGGLGIPYTRSNEAPPLPTEYGALIREV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 +I +EPG I N L + V+ + ++ D+++ + + Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGILVSQVIYVKSGEGRDFLILDAAMNDLIRPAMYDAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + V G C +GD F + P+ GD ++F Y + +N Sbjct: 325 VPLHEAAPGVEQRPYDVVGPVCESGDTFAKGRMLPPLAEGDLVAFRSAGAYGAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + ++++ N Sbjct: 385 TRPLVPEVLVHGRDFAVIRGRPTFDEMINR 414 >gi|161869233|ref|YP_001598399.1| diaminopimelate decarboxylase [Neisseria meningitidis 053442] gi|161594786|gb|ABX72446.1| diaminopimelate decarboxylase [Neisseria meningitidis 053442] gi|325127395|gb|EGC50328.1| diaminopimelate decarboxylase [Neisseria meningitidis N1568] gi|325143686|gb|EGC66005.1| diaminopimelate decarboxylase [Neisseria meningitidis M01-240013] Length = 414 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 126/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ ++ + + Q +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQNEKVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 EPKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + N G R + N Sbjct: 377 AEVLVNGGGYKLIRRRETLEQQMAN 401 >gi|163738911|ref|ZP_02146324.1| diaminopimelate decarboxylase [Phaeobacter gallaeciensis BS107] gi|161387716|gb|EDQ12072.1| diaminopimelate decarboxylase [Phaeobacter gallaeciensis BS107] Length = 421 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 119/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+YL LL + + K + A+K + + TL Q G S Sbjct: 25 VGTPFYLYSTATLLRHFNLFDDALKGMDHLVCYAMKAASNQAILKTLAQAGAGMDVVSQG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E + G+ ++ K + A+ + +++ A +L Sbjct: 85 EYLRAKAAGVPGDRIVFSGVGKTQDEIRTALSGGIRQFNVESEPEMDVINAVALELGVVA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + R+NP V + ++ G E + V G+ H + Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYARAASLPGLKVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + + + + I + LGGG+ + ++ Sbjct: 205 TELAPFELAYQKVAELTEQLRADGHDIHRLDLGGGLGIPYTRSNDTPPLPVEYGAMVQRT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N + + V+ + I+D ++ + + Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGIMVSKVIYVKSGEDRDFLIIDGAMNDLIRPAMYEAYHDI 324 Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + G C GD F P++ GD ++F Y + +N Sbjct: 325 VPVIEPSAGVEQRAYDIVGPVCETGDTFARHRDMPPLEAGDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + N D R +++ N Sbjct: 385 SRPLIPEVLVNGDQFAVIRRRPDFDEMINR 414 >gi|254447342|ref|ZP_05060808.1| diaminopimelate decarboxylase [gamma proteobacterium HTCC5015] gi|198262685|gb|EDY86964.1| diaminopimelate decarboxylase [gamma proteobacterium HTCC5015] Length = 418 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 123/384 (32%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ +Q + + + + A+K + G+ L + G S E Sbjct: 31 GTPAYVYSRQHIESAWRAYDEALGSWPHLICYAVKANSNLGVLSVLAKLGAGFDIVSGGE 90 Query: 63 VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K + A+ + ++L + A+++ Sbjct: 91 LERVLRAGGEAKNIVFSGVGKTAEEMRRALDVGIRCFNVESHAELLRLNRVAEEMGKTAP 150 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + ++GL H + Sbjct: 151 ISLRVNPDVDAQTHPYISTGLKENKFGVAVDQALAVYREADALPNIAIHGLDCHIGSQLT 210 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224 + F LK + + +I + LGGG+ +D + ++ + Sbjct: 211 TIDPFVDALKRVLALVDQLAAEDIEIHHLDLGGGLGICYRDEQPPAVAELMQALTNTLGE 270 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++ EPG +IV N L T V + + KN IVD+++ + L A Sbjct: 271 RRFELLFEPGRSIVGNAGVLLTQVEYLKHSDDKNFAIVDAAMNDLMRPSLYSAWQAIDAV 330 Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD G+ ++ GD ++ + Y + +N Sbjct: 331 EQREGNAKPYDIVGPICETGDFLGKDRELV-LEEGDLLAVQSCGAYGFTMASNYNTRPRA 389 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + ++ Sbjct: 390 VELMVDAGDIKVIRQRETFEQLIE 413 >gi|17547698|ref|NP_521100.1| diaminopimelate decarboxylase [Ralstonia solanacearum GMI1000] gi|17430003|emb|CAD16688.1| probable diaminopimelate decarboxylase protein [Ralstonia solanacearum GMI1000] Length = 451 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 114/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L N + ++ A+K + + Q G S E Sbjct: 59 GTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 118 Query: 63 VMLGHEKFGG--ETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G + V D A+ + ++ +L++ + A L Sbjct: 119 LRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 178 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + + V G+ H + Sbjct: 179 VSLRVNPDVDAKTHPYISTGLKGNKFGVAFDEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 238 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + ++ ++ I +GGG+ T D D + ++ Sbjct: 239 EVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 298 Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 + + EPG ++V N L T V + + D+++ + Sbjct: 299 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 358 Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + P + G C +GD G + GD ++ Y + +N Sbjct: 359 VPVRERGGAPTVYDIVGPVCESGDWLGRDRAL-DAQPGDLLAILSAGAYGFTMSSNYNTR 417 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D A + D Sbjct: 418 GRAAEVIVDGDRVHVARERERFEDLIR 444 >gi|254510199|ref|ZP_05122266.1| diaminopimelate decarboxylase [Rhodobacteraceae bacterium KLH11] gi|221533910|gb|EEE36898.1| diaminopimelate decarboxylase [Rhodobacteraceae bacterium KLH11] Length = 421 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 120/391 (30%), Gaps = 28/391 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + A+K + + TL Q G S Sbjct: 25 VGTPFYVYSTATLQRHFKLFDDALDGTDHLVCYAMKAASNQAILKTLAQAGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E + G+ ++ K D A+ + ++ A L K Sbjct: 85 EYLRAKAAGVPGDKIVFSGVGKTADEIRTALTGGIRQFNVESEPEMQVINAVALDLGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169 I +R+NP V + ++ G V G+ H + Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPISRASEVYALAASLPGLEVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + + I + LGGG+ + +++ Sbjct: 205 TELEPFELAYTKVAELTERLRSEGHNIRRLDLGGGLGIPYTRSNDAPPLPVEYGAMIQKT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N + ++V+ + ++ +I+D ++ + + Y+ Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSSVIYVKSGEDRDFLILDGAMNDLIRPAM-YEAHHD 323 Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I P + G C GD F P+K GD I+F Y + + Sbjct: 324 IVAVEEPAAGVEQRPYDIVGPVCETGDTFARQRNMPPLKSGDLIAFRSAGAYGAVMSSEY 383 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N + + N D S+++ N Sbjct: 384 NTRPLIPEVLVNGDQFAVIRERPSFDEIINR 414 >gi|170289200|ref|YP_001739438.1| diaminopimelate decarboxylase [Thermotoga sp. RQ2] gi|170176703|gb|ACB09755.1| diaminopimelate decarboxylase [Thermotoga sp. RQ2] Length = 386 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 63/374 (16%), Positives = 116/374 (31%), Gaps = 15/374 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ L + + + A+K + L + G + E Sbjct: 12 GTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLRILREEGFGMDVVTKGE 71 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIG 119 ++ + +N K + D I ++ ++ + + Sbjct: 72 LLAAKLAGVPSRSIVWNGNGKSRDQMEYFLREDVRIINVDSFEEME-IWKELNPEGVEYF 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLCF 175 +R+NP V + G +D N+ GL H + F Sbjct: 131 IRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFMERFGSMNIRGLHVHIGSQITRVEPF 190 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPG 234 + + + E I++GGG + R K K ++ +E G Sbjct: 191 VEAFNKVVRASERYG--FEEINIGGGWGINYSGEELDLSSYREKVVPALKRFKRVIIEIG 248 Query: 235 EAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLL--YQESATIYPNTGPYTAM 291 IV + L V+ + V+VD + A + L Y + A Sbjct: 249 RYIVAPSGYLLLRVVLVKRRHNKAFVVVDGGMNALIRPALYSAYHRIFVLGKQGKEMRAD 308 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 V G C +GD+ V+ GD I+ E+ Y N +N P + +G I Sbjct: 309 VVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYTMSNNYNSTTRPAEVLVGENGRI 368 Query: 352 -KAIREFSYNDYYN 364 R + D + Sbjct: 369 SLIRRRETEMDIFK 382 >gi|57505247|ref|ZP_00371176.1| carboxynorspermidine decarboxylase [Campylobacter upsaliensis RM3195] gi|57016383|gb|EAL53168.1| carboxynorspermidine decarboxylase [Campylobacter upsaliensis RM3195] Length = 382 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 136/379 (35%), Positives = 210/379 (55%), Gaps = 18/379 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLAKVSEKSGTKVLLALKGFAFSGAMKIVGEYLHGCACSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H ++ A+KD E D + IIFN++ Q + FK+KA K +GLR Sbjct: 66 EAKFAKEFVDKEIHTFSPAFKDEEFDEIAELSHHIIFNSLYQFHHFKEKA--KAKSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 NP S + L +P +SRLG KD +++ V+GL FH CE +S A+LK Sbjct: 124 CNPEYSLAPKELYNPCGRYSRLGILSKDLENTDLSGVSGLHFHALCE-ESAEALEAVLKA 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E +FG +I ++W++ GGG H T K Y V+ K+FS+K+ VQ+YLEPGEA+ T Sbjct: 183 FEAKFGKWIAGMKWVNFGGGHHITKKGYDVEKLIALCKKFSDKFGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K++ I+D+S EAH+PD ++ ++ + G Sbjct: 243 GVLVASVIDIVENEKHIAILDTSSEAHMPDTIIMPYTSEVLNARILSAREGEQISSLREG 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 T ++ G +CLAGD+ GE+ F+ ++ GD+I F D Y+I + FNG+ +P + + Sbjct: 303 EKTYLLAGNTCLAGDVMGEYAFKNALQRGDKIVFLDQIHYSIVKNTTFNGVILPNLMLYT 362 Query: 347 VDGTIKAIREFSYNDYYNN 365 ++ IR+FSY DY Sbjct: 363 KKKKLEMIRKFSYEDYAKR 381 >gi|308390075|gb|ADO32395.1| diaminopimelate decarboxylase [Neisseria meningitidis alpha710] Length = 414 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 129/385 (33%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L + + A+K + G S E Sbjct: 18 GTPLYVYSKSALTEAFENYQTAFATLNPLVCYAVKANGNLSIIKHFASLGSGFDIVSDGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G +T V + EI+ A+ + ++ ++++ + A +L K Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKVAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHASRQSHLKIVGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I + +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLVEACERILVLVDQLADEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 EPKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + N G R + N Sbjct: 377 AEVLVNGGGYKLIRRRETLEQQMAN 401 >gi|241664492|ref|YP_002982852.1| diaminopimelate decarboxylase [Ralstonia pickettii 12D] gi|240866519|gb|ACS64180.1| diaminopimelate decarboxylase [Ralstonia pickettii 12D] Length = 423 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 114/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L N + + A+K + + Q G S E Sbjct: 31 GTPTYVYSRAALTANYRAYAAACEGRNAHVQYAMKANSNLAVLQVFAQLGAGFDIVSAGE 90 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K D A+ ++ +L++ D A Sbjct: 91 LKRVLAAGAPAAKVVFSGVGKSADEMRFALKVGVACFNVESIPELHRLNDVAASMGKVAP 150 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LRINP V ++ G + + V G+ H + Sbjct: 151 VSLRINPDVDAKTHPYISTGLKGNKFGVAFDEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 210 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + L ++ + ++ I +GGG+ T D D + ++ Sbjct: 211 EVSPYLDALDKVLDVVTQLDAEGIRLAHIDVGGGLGITYTDETPPDITAFARTLLDRVEQ 270 Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 + + EPG ++V N L T V + + D+++ + Sbjct: 271 RGFGDRTVLFEPGRSLVGNAGLLLTRVEYLKPGASKNFCIVDAAMNDLARPAMYEAYHHI 330 Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + P V G C +GD G V+ GD ++ Y + +N Sbjct: 331 VPVRESQSAPVVYDVVGPVCESGDWLGRDRSLA-VQPGDVVAILSAGAYGFTMSSNYNTR 389 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D A + D Sbjct: 390 NRAAEVIVDGDKVHLARERECFEDLIR 416 >gi|89069733|ref|ZP_01157069.1| Orn/DAP/Arg decarboxylase, family 2 [Oceanicola granulosus HTCC2516] gi|89044679|gb|EAR50790.1| Orn/DAP/Arg decarboxylase, family 2 [Oceanicola granulosus HTCC2516] Length = 421 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 120/392 (30%), Gaps = 26/392 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + LL + + + ++K + + L + G S Sbjct: 25 VGTPVYVYSAKTLLRHYGLFAQALEGLDHLICFSVKSLSNLAILSLLAREGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E GE ++ ++ A+ + ++ + A + Sbjct: 85 EYARARAAGVPGERIVFSGVGKTREEMRLALEGGIRQFNLESEPEMRALSEVASGMGVVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNC-- 167 + +R+NP V + ++ G + + V G+ H Sbjct: 145 PVTVRVNPDVDARTHAKISTGKSENKFGIPIRKAREVYAEAAALPGLEVVGIDVHIGSQL 204 Query: 168 -ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 E F + ++ I + LGGG+ + +K Sbjct: 205 IELGPFEQAYRKVADLTATLRADGHDIRRLDLGGGLGIPYTRSNEVPPLPLDYGALIKRT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 V++ +EPG I N+ L + V+ + E ++ +I+D ++ V + Sbjct: 265 VGDLGVEVQIEPGRLIAGNSGVLLSRVIYVKEGEGRDFLILDGAMNDLVRPAMYDAWHDI 324 Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C +GD F + GD ++F Y + +N Sbjct: 325 VPVAEPAAGGATRDFDVVGPICESGDTFARARPLPELAAGDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + + D + +Y + S Sbjct: 385 SRPLVPEVLVSGDHFAVIRQRPTYEELIARDS 416 >gi|307721570|ref|YP_003892710.1| diaminopimelate decarboxylase [Sulfurimonas autotrophica DSM 16294] gi|306979663|gb|ADN09698.1| diaminopimelate decarboxylase [Sulfurimonas autotrophica DSM 16294] Length = 403 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 56/383 (14%), Positives = 111/383 (28%), Gaps = 22/383 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + K + A+K + + + G S+ E Sbjct: 12 GTPLYVYDFDYMSEQYTELKEAFKGRKSIIAYAVKANSNLSVVRHFAKMGSGADCVSIGE 71 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 V ++ K + D I + ++L + + A++L + Sbjct: 72 VRRAFLAGIPAYKIIFSGVGKSDDEIREAIEKDILYINVESEAELQRVESIAEELGRPSR 131 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 I +R+NP++ ++ G SE + G+ FH + Sbjct: 132 ISIRVNPNIDPQTHPYISTGLHDNKFGVDLSTAKRMYIQAKNSEHLDPVGIHFHIGSQLT 191 Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 + + ++++ +GGG+ + D+ Q + Sbjct: 192 QLQPIREAAEIVADLIRSLQAIDIELKFFDVGGGLGVKYGNEETIKPYDYAQAILSTLTA 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280 + I EPG + N T VL K V+VD ++ + L A Sbjct: 252 LDLTILCEPGRFLTANAGYFVTKVLYEKQNGDKKFVVVDGAMNDLLRPSLYNAYHKIEAI 311 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 N + G C +GD F + + + D + Y + +N Sbjct: 312 TDNNGKTREVDIVGPVCESGDFFAKNYPLPELNRNDLLVIHSAGAYGFGMGSNYNTRGRS 371 Query: 341 TIAVKNVDGTIKAIREFSYNDYY 363 + + D Sbjct: 372 AEVAVQNGKARLIRKRECFEDLI 394 >gi|83951152|ref|ZP_00959885.1| diaminopimelate decarboxylase [Roseovarius nubinhibens ISM] gi|83839051|gb|EAP78347.1| diaminopimelate decarboxylase [Roseovarius nubinhibens ISM] Length = 421 Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 52/390 (13%), Positives = 116/390 (29%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + A+K + + TL + G S Sbjct: 25 VGTPFYVYSTATLERHFRLFDEALEGIDHLVCYAMKAASNQAILKTLARLGAGMDVVSGG 84 Query: 62 E-VMLGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E G+ ++ +D A+ + ++ + A +L + Sbjct: 85 EYARAIAAGVPGDRIVFSGVGKTRDEMRAALTGGIRQFNVESEPEMAALNEVALELGTRA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 + R+NP V + ++ G V G+ H + Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIARARDVYAQAAAMPGLEVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + I + LGGG+ ++ + +KE Sbjct: 205 TDLEPFRLAYRKVAELTETLRAEGHDIRRLDLGGGLGIPYARGNEAPPLPVEYGKMIKEE 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 +I +EPG + N + + V+ + ++ D ++ + + Sbjct: 265 LGHLGCEIEIEPGRLVAGNAGLMVSRVIYVKSGEDREFLILDGAMNDLIRPAMYDAHHDI 324 Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C +GD F + + GD ++F Y + +N Sbjct: 325 VPVVEPQAGAEQRPYDVVGPVCESGDTFAKGRNLPVLNAGDLVAFRSAGAYGAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + S+++ N Sbjct: 385 TRPLIPEVLVHGHQFAVIRARPSFDEMINR 414 >gi|300702820|ref|YP_003744421.1| diaminopimelate decarboxylase [Ralstonia solanacearum CFBP2957] gi|299070482|emb|CBJ41777.1| Diaminopimelate decarboxylase [Ralstonia solanacearum CFBP2957] Length = 419 Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 116/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L N + ++ A+K + + Q G S E Sbjct: 27 GTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 86 Query: 63 VMLGHEKFGG--ETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G + V D A+ + ++ +L++ + A L Sbjct: 87 LRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G ++ + V G+ H + Sbjct: 147 VSLRVNPDVDAKTHPYISTGLKGNKFGIAFEEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + ++ ++ I +GGG+ T D D + ++ Sbjct: 207 EVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 266 Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 + + EPG ++V N L T V + + D+++ + Sbjct: 267 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 326 Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G C +GD G V+ GD ++ Y + +N Sbjct: 327 VPVRERGGAATVYDVVGPVCESGDWLGRDRAL-DVQPGDLLAILSAGAYGFTMSSNYNTR 385 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D A + D Sbjct: 386 NRAAEVIVDGDRVHVARERERFEDLVR 412 >gi|312115134|ref|YP_004012730.1| diaminopimelate decarboxylase [Rhodomicrobium vannielii ATCC 17100] gi|311220263|gb|ADP71631.1| diaminopimelate decarboxylase [Rhodomicrobium vannielii ATCC 17100] Length = 422 Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 114/389 (29%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y + + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATIERHYRVFAEAFTGLDALVCYAIKANSNVSVIRTLAKLGSGADVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + ++ K A + + ++L A + Sbjct: 85 EIRRALAAGIPADKIVFSGVGKTEAEMAFALDAGIYGFNVESEAELRALSQVASGRGRTA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169 + RINP V + + G +D +V G+ H + Sbjct: 145 RIAFRINPDVDAKTHAKISTGKSEHKFGVSWRDARALYALARDLPGLDVAGVHMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + I +++LGGG+ + D+ + + Sbjct: 205 THMEPFRDAFDLMANLVEDLRRDGHTISYVNLGGGLGIPYRWDQEVPPLPSDYAEIVIGL 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESAT 280 S + ++ EPG IV N L T V+ + K VIVD+ + V L Sbjct: 265 SNRLGARLLFEPGRIIVGNAGILVTQVIYSKHSGEKRFVIVDAGMNDLVRPTLYDAYHDI 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A V G C GD + + GD I+ Y + + +N Sbjct: 325 WPVNEAQRNASIGRADVVGPVCETGDFLAKDRDMPELAPGDLIAVMTAGAYGAAQSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + N SY D Sbjct: 385 TRRLVPEVLVNGADYAVVRPRPSYEDMLR 413 >gi|300690200|ref|YP_003751195.1| diaminopimelate decarboxylase [Ralstonia solanacearum PSI07] gi|299077260|emb|CBJ49886.1| Diaminopimelate decarboxylase [Ralstonia solanacearum PSI07] Length = 419 Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 57/387 (14%), Positives = 118/387 (30%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L N ++ ++ A+K + + Q G S E Sbjct: 27 GTPTYVYSRAALTANYRAYAAACESRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K D A+ + ++ +L++ + A L Sbjct: 87 LRRVLAAGGKAANVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LRINP V ++ G ++ + + G+ H + Sbjct: 147 VSLRINPDVDAKTHPYISTGLKGNKFGVAFEEVLPTYRAAAAMPNLRMVGIDCHIGSQIT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + ++ ++ I +GGG+ T D D + ++ Sbjct: 207 EVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 266 Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 + + EPG ++V N L T V + + D+++ + Sbjct: 267 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 326 Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + P + G C +GD G V+ GD ++ Y + +N Sbjct: 327 VPVRERGGAPTVYDIVGPVCESGDWLGRDRAL-DVQPGDLLAILSAGAYGFTMSSNYNTR 385 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D A + D Sbjct: 386 NRAAEVIVDGDRVHVARERERFEDLIR 412 >gi|28899758|ref|NP_799363.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus RIMD 2210633] gi|153838760|ref|ZP_01991427.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AQ3810] gi|260365174|ref|ZP_05777739.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus K5030] gi|260878126|ref|ZP_05890481.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AN-5034] gi|260895817|ref|ZP_05904313.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus Peru-466] gi|260900850|ref|ZP_05909245.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AQ4037] gi|28808010|dbj|BAC61247.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus RIMD 2210633] gi|149747846|gb|EDM58730.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AQ3810] gi|308087170|gb|EFO36865.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus Peru-466] gi|308092764|gb|EFO42459.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AN-5034] gi|308110594|gb|EFO48134.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AQ4037] gi|308111029|gb|EFO48569.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus K5030] gi|328472415|gb|EGF43281.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus 10329] Length = 417 Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 61/378 (16%), Positives = 111/378 (29%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGDAKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVIAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V ++ G E NV G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPEVYQFAQSLPNLNVQGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 S F + + I + +GGG+ P L Sbjct: 207 SIDPFIDATDRLLALIDDLKAQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLEN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 N P T + G C GD G+ ++ GD ++ Y + +N Sbjct: 327 VSPRNGEPQTYDLVGPICETGDFLGKDRALV-LQEGDLLAVRSAGAYGFVMSSNYNTRTR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + + + Sbjct: 386 AAEVMVDGNQSHLVRQRE 403 >gi|310642618|ref|YP_003947376.1| diaminopimelate decarboxylase [Paenibacillus polymyxa SC2] gi|309247568|gb|ADO57135.1| Diaminopimelate decarboxylase [Paenibacillus polymyxa SC2] Length = 455 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 67/400 (16%), Positives = 135/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+Q + + + G ++ A K F M + S Sbjct: 30 GTPLYIVDEQLVRRRCREFIEAFRETGLKFQVAYASKAFCVMAMCALAAEEGMSLDVVSS 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K E + + + ++ +L+ + A + ++ Sbjct: 90 GELFTALQAGFPAERIHFHGNNKTPEEIEMALEAQIGCFVVDSKMELHLLQALASEKGQQ 149 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 I LR+ P V + S+ G + I+ + N+ G+ H Sbjct: 150 VNILLRVTPGVEAHTHEYMATGQEDSKFGFDIANGTARQAVEQAIKLDHLNLLGVHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK----DFCQRL 218 + F + + Q+++ I+LGGG + + Q + Sbjct: 210 SQIFEVNGFQMAAERVAVFCREIKEQLQYSFKVINLGGGFGIRYTEEDTPLKLSTYVQAI 269 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 E + + +I++EPG +IV ++ T TV I + + V + + Sbjct: 270 GEAVKTHFSGLYDELPEIWIEPGRSIVGDSGTTLYTVGSIKDIPQVRKYVSVDGGMTDNP 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + T + G+ C +GD+ GD ++ Sbjct: 330 RPALYQAKYEAMLANRAQDANEETVSIAGKCCESGDMLIWDVELPRPNSGDLLAVASTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P + N +R +Y D N Sbjct: 390 YNYSMASNYNRIRRPAVVFVNNGEAELVVRRETYEDIVRN 429 >gi|254670860|emb|CBA07331.1| Diaminopimelate decarboxylase [Neisseria meningitidis alpha153] Length = 406 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 ++ G +T V + EI+ A+ + ++ ++++ + A++L Sbjct: 78 LVRVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAERLGKTAS 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLVEACERILILVDTLVAEGIVLEHLDLGGGVGIVYQDESVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKNIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + G R + N Sbjct: 377 AEVLVDGGGYRLIRRRETLEQQMAN 401 >gi|86139003|ref|ZP_01057574.1| diaminopimelate decarboxylase [Roseobacter sp. MED193] gi|85824234|gb|EAQ44438.1| diaminopimelate decarboxylase [Roseobacter sp. MED193] Length = 421 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 62/390 (15%), Positives = 118/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ LL + + + A+K + + TL Q G S Sbjct: 25 VGTPFYVYSTATLLRHFRLFDEALEGMDHLVCYAMKAASNQAILKTLAQAGAGMDVVSQG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E + G+ ++ K + + ++ A +L + Sbjct: 85 EYLRAKAAGVPGDKIVFSGVGKTADEIRCALSGGIRQFNVESEPEMAVINAVALELGQVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I +R+NP V + ++ G E V G+ H + Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPISRAREVYAHAATLPGLKVIGVDCHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + I + I + LGGG+ ++ Q +KE Sbjct: 205 TELEPFRKAYEKIAELTESLRADGHDIHRLDLGGGLGIPYTRSNEAPPLPVEYGQLIKET 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N + + V+ + IVD ++ + + Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSKVIYVKSGEDREFLIVDGAMNDLIRPAMYEAHHDI 324 Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + N + G C GD F + P+ GD I+F Y + +N Sbjct: 325 VAVNEPAPGIENRPYDIVGPVCETGDTFAKQRDMPPLAAGDLIAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D +++ N Sbjct: 385 SRPLIPEVLVHGDQFAVIRPRPDFDEMINR 414 >gi|312885171|ref|ZP_07744851.1| carboxynorspermidine decarboxylase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367184|gb|EFP94756.1| carboxynorspermidine decarboxylase [Vibrio caribbenthicus ATCC BAA-2122] Length = 376 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 166/367 (45%), Positives = 243/367 (66%), Gaps = 3/367 (0%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+++ID+ KL+ NL A +++ +G KL+LALKCF+ WG+FD + Y+DGTTSS +E Sbjct: 7 KTPFFMIDENKLIENLKIAQHLKDISGAKLVLALKCFSTWGVFDIIKPYLDGTTSSGPFE 66 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 V LG+E FG ETHAY+V Y +++AV + CD +IFN+ SQL ++ ++ IGLR+ Sbjct: 67 VKLGYETFGKETHAYSVGYSKEDVEAVSTYCDKLIFNSQSQLQAYRHLVKE-GTSIGLRL 125 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP VS++ LADP R FSRLG + + ++G MFH NCENK FS +L+ I Sbjct: 126 NPGVSHASQDLADPARQFSRLGVHQEQLLSESFNCIDGAMFHMNCENKDAGSFSQLLEQI 185 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 + FG ++ Q++W+SLGGGI FT Y ++ + L++F++++ VQ+YLEPGEAI+T TT Sbjct: 186 SENFGEYLNQLKWVSLGGGIFFTWPGYDIQTLGKSLRDFAKRHGVQVYLEPGEAIITETT 245 Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAG 300 L TV+DI EN IVDS+ EAH D L+Y E A++ N G + ++ SCLAG Sbjct: 246 DLVVTVVDIVENGMRTAIVDSATEAHRLDTLIYNEPASVLEASNDGEHQYVIGSCSCLAG 305 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 D F F+KP++IG R+ +D AGY + + NWFNG+ MP+I + +G ++ + EF Y Sbjct: 306 DQFCIARFDKPLEIGQRLHIQDSAGYTMVKLNWFNGLRMPSIYCRRSNGEVRKLNEFGYQ 365 Query: 361 DYYNNLS 367 D+ + LS Sbjct: 366 DFKDALS 372 >gi|163744294|ref|ZP_02151654.1| diaminopimelate decarboxylase [Oceanibulbus indolifex HEL-45] gi|161381112|gb|EDQ05521.1| diaminopimelate decarboxylase [Oceanibulbus indolifex HEL-45] Length = 421 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 61/390 (15%), Positives = 121/390 (31%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ LL + + A+K + + TL Q G S Sbjct: 25 VGTPVYVYSTATLLRHFHLFDDALSGMDHLVCYAMKANSNQAVLRTLAQAGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E G+ ++ K E + + ++ A++L K Sbjct: 85 EYRRAKAAGVAGDRIVFSGVGKTREEIELALTGGIRQFNVESEPEMILLDIVARELGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 I +R+NP V + ++ G E + G+ H + Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYAMAATLPGLEIIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + I + LGGG+ + D+ ++ Sbjct: 205 TDLAPFEQAYGKVAELTEVLRADGHNIRRLDLGGGLGIPYERSNSAPPLPTDYGAMVQRT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N L + V+ + ++ +I+D+++ + + Sbjct: 265 LGHLDCEIEIEPGRLIAGNAGVLVSEVIYLKSGEGRDFLILDAAMNDLIRPAMYDAWHDI 324 Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + N P + G C +GD F + + GD ++F Y + +N Sbjct: 325 VPLNEPAPGAEPRPVDIVGPVCESGDTFAKQRMMPVLGSGDLVAFRSAGAYGAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + N D S+++ N Sbjct: 385 SRPLIPEVLVNGDQFAVIRPRPSFDEMINR 414 >gi|126726029|ref|ZP_01741871.1| diaminopimelate decarboxylase [Rhodobacterales bacterium HTCC2150] gi|126705233|gb|EBA04324.1| diaminopimelate decarboxylase [Rhodobacterales bacterium HTCC2150] Length = 421 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 112/390 (28%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y + + A+K + + L G S Sbjct: 25 VGTPFYAYSAATFARHFQVLDEALSWGPHLICYAMKANSNQAILKMLGDMGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E GE ++ K + + + ++ + A KL Sbjct: 85 EYARARAAGVPGERIVFSGVGKTRDEIEMTLKGGIRQFNVESEPEMVVLSEIATKLGLIA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I +R+NP V + ++ G E + G+ H + Sbjct: 145 PITIRVNPDVDAKTHEKIATGKKENKFGIPISRAREVYAMAAGLPGLKIVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-----QRLKEF 221 + + + K +I + LGGG+ Q ++E Sbjct: 205 TDLTPYREAFELVAELTKTLREDGHEISRLDLGGGLGIPYARDNDAPPVPAEYGQIVRET 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG + N L + V+ + + +I+D+++ + + Sbjct: 265 VGDLGCEIEIEPGRLVAGNAGVLVSEVIYVKSGEDREFLILDAAMNDLIRPAMYSAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + G C +GD F + P++ D ++F Y + +N Sbjct: 325 VPLKEAEVGVEMQPYDIVGPVCESGDTFAKQRPLPPLEATDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 M + D + + N Sbjct: 385 TRPMVPEVLVMGDQFAVIRPRPTLEEIINR 414 >gi|240112021|ref|ZP_04726511.1| hypothetical protein NgonM_00270 [Neisseria gonorrhoeae MS11] gi|254492827|ref|ZP_05105998.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae 1291] gi|268598074|ref|ZP_06132241.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae MS11] gi|226511867|gb|EEH61212.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae 1291] gi|268582205|gb|EEZ46881.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae MS11] Length = 406 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + G S E Sbjct: 18 GTPLYVYSQSALTGAFENYQTAFAALNPLVCYAVKANGNLSIIKHFASFGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKIAARLGKTAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ KD + + + +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDEGVPDLGAYARAVQKLMGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T P TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKNIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNTRNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + G R + N Sbjct: 377 AEVLVDGGGYKLIRRRETLEQQMAN 401 >gi|39995269|ref|NP_951220.1| diaminopimelate decarboxylase [Geobacter sulfurreducens PCA] gi|39982031|gb|AAR33493.1| diaminopimelate decarboxylase [Geobacter sulfurreducens PCA] gi|298504274|gb|ADI82997.1| diaminopimelate decarboxylase [Geobacter sulfurreducens KN400] Length = 417 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 55/385 (14%), Positives = 114/385 (29%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ L + + ++K + + T G S Sbjct: 25 VGSPVYVYSHATLTRHFTAFDEAFAGVPHTICYSVKANSTQAVLRTFITLGGGADIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y+ K + N + +L + + A ++ KK Sbjct: 85 ELYRALQAGVDPKKVVYSGVGKKDDEIEYALNTGILMFNVESEQELTRISEIASRMGKKA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 G+ R+NP V ++ G + + +V G+ H + Sbjct: 145 GIAIRVNPDVDPQTHPYITTGLKNAKFGITIDRAMAEYARAKTLPGIDVIGIDMHIGSQL 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS---E 223 F ++ ++ + +++ GGG+ KE + Sbjct: 205 TKVTPFVDSIEKLKTMIANLRGQGIDLQYFDCGGGLGIQYSTEEPPLPADYGKEIVAATK 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES---A 279 + + + EPG IV N L T L + KN +++D+ + L Sbjct: 265 ELGMHLLFEPGRNIVGNAGILVATCLFTKERDEKNFIMIDAGMNDLARPALYGSFHGVQP 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G A + G C +GD + + GD ++F Y + +N Sbjct: 325 VVKDQDGMIVADIVGPICESGDFLVKDREVPMFRQGDLMAFMSAGAYGFAMSSTYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D Sbjct: 385 VAEVMVKGNQFEVVRERETVEDLIR 409 >gi|255065336|ref|ZP_05317191.1| diaminopimelate decarboxylase [Neisseria sicca ATCC 29256] gi|255050161|gb|EET45625.1| diaminopimelate decarboxylase [Neisseria sicca ATCC 29256] Length = 406 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 64/385 (16%), Positives = 126/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFENYQTAFAALSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A++L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALHAGVKCFNMESIPEIDRIQKVAERLGKTAS 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAARQSHLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLVEACERILILVDRLADEGIVLEHLDLGGGVGIVYQDETIPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLARVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHRIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 EPKNIPPLTANIVGPICETGDFLGKDRTLA-CEEGDLLVIRSAGAYGASMASNYNTRNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + R + N Sbjct: 377 AEVLVDGSEYRLIRRRETLEQQMAN 401 >gi|149913117|ref|ZP_01901651.1| diaminopimelate decarboxylase [Roseobacter sp. AzwK-3b] gi|149813523|gb|EDM73349.1| diaminopimelate decarboxylase [Roseobacter sp. AzwK-3b] Length = 421 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 59/391 (15%), Positives = 118/391 (30%), Gaps = 28/391 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLTRHFRLFDEALAGTEHLICYAMKAASNLAILKTLAELGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E GE ++ +D A+ + ++ + A L Sbjct: 85 EYARAKAAGVPGERIVFSGVGKTRDEMRMALEGGIRQFNVESEPEMAALNEVALSLGLRA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 I +R+NP V + ++ G + V G+ H + Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIARAREIYAEAAAMPGLEVVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + I + LGGG+ D+ Q +K+ Sbjct: 205 TELEPFRLAYEKVADLTEALRADGHDIRRLDLGGGLGIPYTRSNEAPPLPVDYGQLIKDT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 +I +EPG +V N L + V+ + ++ D+++ + + Y Sbjct: 265 VGHLGCEIEIEPGRLVVGNAGILVSEVIYLKAGEGRDFLILDAAMNDLIRPAM-YDAYHD 323 Query: 281 IYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I P P + G C +GD F + + GD ++F Y + + Sbjct: 324 IVPVREPQPGAEQAAYDIVGPVCESGDTFAKARMMPALAQGDLVAFRSAGAYGAVMASEY 383 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N + + + ++++ N Sbjct: 384 NTRPLVPEVLVHEHQFAVIRARPTFDEIINR 414 >gi|299137487|ref|ZP_07030669.1| diaminopimelate decarboxylase [Acidobacterium sp. MP5ACTX8] gi|298600892|gb|EFI57048.1| diaminopimelate decarboxylase [Acidobacterium sp. MP5ACTX8] Length = 423 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 64/388 (16%), Positives = 124/388 (31%), Gaps = 26/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + A+K ++ + L + G S E Sbjct: 32 GTPLYVYSGDAIAERARMLQQEFAGVLHTICYAVKANSSLAVMRMLGELGCGFDIVSGGE 91 Query: 63 VMLGHEKFG---GETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + G V + E+ A+ + + ++L ++AQ L K Sbjct: 92 LERVRRAAPEALGRVVFSGVGKQAWEMDAALDAGILLFNVESEAELEVLAERAQALGKIA 151 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCEN 169 LR+NP V + G + E + V G+ H + Sbjct: 152 RIALRVNPDVFAETHPYISTGLREHKFGIAIERAREVYQRAVRMQGIEPAGVSVHIGSQI 211 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD------FCQRLKE 220 +S F+ ++ + ++ I ++ GGG + + L+E Sbjct: 212 RSVEPFAEAVRRVRSLVEDLRGDGMDIRYVDAGGGFGIEYGKAEFDPAARVAEYARALRE 271 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA 279 + + + LEPG +V L T VL +N K+ VI D+++ + L Sbjct: 272 VLDGLNAHLLLEPGRFLVAQAGALLTRVLYTKQNGKKHFVITDAAMNDLIRPALYQAHHE 331 Query: 280 TIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + G C +GD F + ++ GD + D Y ++ + +N Sbjct: 332 IVPVVKDERAVQVADIVGPVCESGDFFARDRETQELRQGDLVVLLDAGAYGMSLASHYNT 391 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 P + R + +D Sbjct: 392 RVRPAEVLVEQGRARLIRRRETLDDLLA 419 >gi|153813546|ref|ZP_01966214.1| hypothetical protein RUMOBE_03968 [Ruminococcus obeum ATCC 29174] gi|149830346|gb|EDM85438.1| hypothetical protein RUMOBE_03968 [Ruminococcus obeum ATCC 29174] Length = 404 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 125/378 (33%), Positives = 199/378 (52%), Gaps = 14/378 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP Y++D++ L+ N + + G K+LLA K F+ + + Y+ GT +S L+ Sbjct: 24 LKTPCYILDEKALIKNAKLLGEVSERTGCKMLLAQKAFSNYDCYRFFEPYLAGTEASGLF 83 Query: 62 EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E LG E+ G E H + Y+ + + +L D I+FN+ SQL +F KA+ K +GL Sbjct: 84 EARLGAEEMPGKEVHVFCAGYRADDFEELLQYADHIVFNSPSQLLRFGAKAKVAGKSVGL 143 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173 RINP S + DP P SR+G E+ KN ++GL FH CE S Sbjct: 144 RINPECSTQEGHDIYDPCAPGSRMGTTRAQWDEAFQKNPELLDLLDGLHFHTLCEQDSDD 203 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 L +++K FG ++++WI+ GGG H T Y ++ + ++ E++ ++YLEP Sbjct: 204 -LETTLVSVKKHFGDLASRVKWINFGGGHHITRPGYDIERLERCIRMVQEEWKAEVYLEP 262 Query: 234 GEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPY 288 GEA N L T+VLD+ + IVD+S H+PD L + G Sbjct: 263 GEAWALNAGFLLTSVLDVLKNGETQIAIVDASAACHMPDVLEMPYLPPLLGTDETEEGGI 322 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 T + G +CL+GD+ GE+ F + + GD + F D+A Y + N FNG+++P I +++ D Sbjct: 323 TVRLGGSTCLSGDVIGEYKFRQLPEYGDLLMFGDMAIYTTCKNNTFNGMSLPNIWLRHAD 382 Query: 349 GTIKAIREFSYNDYYNNL 366 T++ + EF Y D+ L Sbjct: 383 NTMQQLTEFGYMDFKERL 400 >gi|325579300|ref|ZP_08149256.1| diaminopimelate decarboxylase [Haemophilus parainfluenzae ATCC 33392] gi|325159535|gb|EGC71669.1| diaminopimelate decarboxylase [Haemophilus parainfluenzae ATCC 33392] Length = 416 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 118/384 (30%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFDSALGEHPHLICYAVKANSNIGILNVMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K + A+ +V++L+ A ++ K Sbjct: 86 LERVLAAGGEASKVVFSGVAKSRAEIMRALEVGIRCFNVESVAELHHINQIAGEMGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYKLATTLPHVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + + ++ + LGGG+ T +P L + + Sbjct: 206 ELQPFLDATDRLIRLIEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYAAALLNKLKD 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L I Sbjct: 266 YEDLEIILEPGRAITANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLEREKTIYDVVGPVCETSDFLGKQRELA-IAEGDYIAQRSAGAYGASMSSNYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D R + ++ Sbjct: 385 RTAEVLVDGDKAHLIRRRENLSEL 408 >gi|282881312|ref|ZP_06289992.1| carboxynorspermidine decarboxylase [Prevotella timonensis CRIS 5C-B1] gi|281304788|gb|EFA96868.1| carboxynorspermidine decarboxylase [Prevotella timonensis CRIS 5C-B1] Length = 441 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 118/377 (31%), Positives = 192/377 (50%), Gaps = 16/377 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+++++KL NL ++ A V+++LA K +A W F +Y+ TT+SSL E + Sbjct: 65 PIYILEEEKLRRNLQLIRHVATTADVEIILAFKAYALWKTFPIFREYIHATTASSLNEAL 124 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGLRI 122 LG FG TH Y+ AY D E++ ++ + FN++SQ ++ A++ + ++GLRI Sbjct: 125 LGFHAFGEPTHTYSPAYTDDEMEEIVRCSSHVTFNSLSQYERYHVLARQVQPNVQLGLRI 184 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S L +P P +R G S ++ G H +CE+ F L +I Sbjct: 185 NPEYSEVGTDLYNPCAPGTRFGVTADQLPPSLPNDLTGFHCHCHCESG-ADVFQRTLAHI 243 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E++F H+ ++ WI+ GGG T +DY V L+ F +++ Q+ LEPG A T Sbjct: 244 EEKFSHWFDELSWINFGGGHLMTRQDYDVDLLIALLQNFKQRHPHLQVILEPGSAFAWQT 303 Query: 242 -TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY-----------PNTGPYT 289 + V + + IV+ S H+PD L TI + Sbjct: 304 GVLVAQVVDVVENHGIRTAIVNVSFTCHMPDCLEMPYQPTIRNATTLAPKSQNHTEKKHV 363 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 + G SCL+GD G++ F+ +K+G+ + FED+ Y + N FNGI P IA+ DG Sbjct: 364 YRIGGNSCLSGDFMGDWQFDHELKVGENLIFEDMLHYTTVKTNMFNGIAHPAIALLKTDG 423 Query: 350 TIKAIREFSYNDYYNNL 366 T++ +RE++Y+DY + Sbjct: 424 TLQMLREYTYDDYRLRM 440 >gi|154174502|ref|YP_001408878.1| diaminopimelate decarboxylase [Campylobacter curvus 525.92] gi|112803741|gb|EAU01085.1| diaminopimelate decarboxylase [Campylobacter curvus 525.92] Length = 399 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 63/383 (16%), Positives = 113/383 (29%), Gaps = 21/383 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + N + + A+K + + L G S+ E Sbjct: 11 GTPLYVYDFDYITNRYNMLKDAFSARKSLICYAVKANSNLSVLKLLASLGAGFDCVSIGE 70 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 V + K + D I + +++ + +D +KL+ K Sbjct: 71 VRRALLAGAKKYQIILSGVGKRDDELEEALKSDILMINLESEAEMYRLEDITKKLNLKAR 130 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 + R+NP V ++ G + I G+ FH + Sbjct: 131 ISIRVNPDVDAKTHPYISTGLNENKFGVDINTAKKMYIHAKNSAALEPVGVHFHIGSQLT 190 Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + + + I++ +GGGI ++ D+ Q + Sbjct: 191 NIEPIIEAAGIVSELMRELKALEIDIKFFDVGGGIGIIYQNETDISLYDYAQGILAKLGG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 V I EPG IV N T+VL K +IVD ++ + L Sbjct: 251 QDVTIVCEPGRFIVGNAGYFLTSVLYEKFNKQKRFIIVDGAMNDLIRPSLYGAYHGISVV 310 Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C +GD F + + GD I + Y + + +N Sbjct: 311 GKNTSAGACDVVGPICESGDFFAKNLNLPACESGDIIVIKSAGAYGFSMSSNYNSRARAA 370 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + ++ D Sbjct: 371 EVAVQDKAHRLIRKRENFEDIIA 393 >gi|91227530|ref|ZP_01261867.1| diaminopimelate decarboxylase [Vibrio alginolyticus 12G01] gi|91188554|gb|EAS74846.1| diaminopimelate decarboxylase [Vibrio alginolyticus 12G01] Length = 417 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 109/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ +TL + G S E Sbjct: 27 GTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGDPKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVIAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V ++ G + NV G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPDVYKFAQSLPNLNVQGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + F + + I + +GGG+ P L Sbjct: 207 NIDPFIDATDRLLALIDDLKAQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLEN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C GD G+ ++ GD ++ Y + +N Sbjct: 327 VSPRKGEAQTYDLVGPICETGDFLGKDRALV-LQEGDLLAVRSAGAYGFVMSSNYNTRTR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + + Sbjct: 386 AAEVMVDGKQSHLVRQRE 403 >gi|325135569|gb|EGC58187.1| diaminopimelate decarboxylase [Neisseria meningitidis M0579] gi|325201385|gb|ADY96839.1| diaminopimelate decarboxylase [Neisseria meningitidis M01-240149] gi|325207366|gb|ADZ02818.1| diaminopimelate decarboxylase [Neisseria meningitidis NZ-05/33] Length = 414 Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFGG--ETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDATKTIFSGVGKNEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + R + N Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401 >gi|20808385|ref|NP_623556.1| diaminopimelate decarboxylase [Thermoanaerobacter tengcongensis MB4] gi|20516997|gb|AAM25160.1| Diaminopimelate decarboxylase [Thermoanaerobacter tengcongensis MB4] Length = 445 Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 67/400 (16%), Positives = 137/400 (34%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ L N K G +++ A K F + + + G S Sbjct: 29 GTPLYVIDEELLRQNCRAFYNGFKRDYPGNEVIYASKAFMTMAICKIIEEENLGLDVVSG 88 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-- 115 E+ F E ++ ++ I A+ ++ II + +LN + A+K++ Sbjct: 89 GELYTALKAGFPPEKIYFHGNNKSREELIMALENDIGKIIVDNWHELNMLNELARKMNKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 I +R++P + + S+ G + + + N+ GL H Sbjct: 149 PNIYIRVSPGIEAHTHQYVKTGQIDSKFGFPLFNGDAMRAIEYALTLKNVNLVGLHSHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + A ++ + ++E + LGGG + +++ Sbjct: 209 SQIFDSYSYKAEIEIMMNFIKLIKEFLGWEVEELDLGGGFGIAYTEEDDPQPIEKIAHEM 268 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I +EPG +I+ N T TV I E V + ++ Sbjct: 269 MQSVKEYSVSLNVKMPKIIVEPGRSIIGNAGTTLYTVGAIKEIPGIRKYVAVDGGMSDNI 328 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N + G+ C +GD+ ++ GD ++ Sbjct: 329 RTALYGAKYEAIVANKARLPRVEKVSIAGKLCESGDMLIWDILLPEIEEGDILAVLSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N + P + + + +Y D Sbjct: 389 YNYSMASNYNRLPRPAAVLVSNGQADVIVERETYEDLVRK 428 >gi|260778833|ref|ZP_05887725.1| carboxynorspermidine decarboxylase putative [Vibrio coralliilyticus ATCC BAA-450] gi|260604997|gb|EEX31292.1| carboxynorspermidine decarboxylase putative [Vibrio coralliilyticus ATCC BAA-450] Length = 377 Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 169/368 (45%), Positives = 247/368 (67%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMINEDKLVENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LGHE FGGETHAY+V Y + ++ V CD +IFN+ +QL ++ + +GLR Sbjct: 66 EVKLGHETFGGETHAYSVGYSEDDVRDVADICDKMIFNSQNQLAAYRHIVEGKA-SLGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + ++++G+MFH NCENK F +L + Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIDPEVFEDIDGVMFHMNCENKDVDAFIDLLDS 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FGH++ +++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISEQFGHYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A+I + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEAVDKGEHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F E F+KP++IG R+ D AGY + + NWFNG+ MP++ + G I+ + EF Y Sbjct: 305 GDQFCEASFDKPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSGGDIQKLNEFDY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 SDFKRSLS 372 >gi|307943498|ref|ZP_07658842.1| diaminopimelate decarboxylase [Roseibium sp. TrichSKD4] gi|307773128|gb|EFO32345.1| diaminopimelate decarboxylase [Roseibium sp. TrichSKD4] Length = 424 Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 124/388 (31%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + + A+K + + TL+ G S Sbjct: 25 VGTPFYCYSTATLTRHYEVFSSAFVGIDTLVCYAMKANSNQAVLRTLSDLGAGMDVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + ++ K A + D + +L++ A ++ K Sbjct: 85 ELRRARAAGVPADRILFSGVGKTEAEQAYALDEDILCFNVESEPELDQLSRVASQIGKTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 LRINP V + ++ G + E V+G+ H + Sbjct: 145 RVSLRINPDVDAKTHAKISTGKAENKFGISWRRAREVYAHAAKLPGIQVSGIDMHIGSQI 204 Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 + F L + + I+ I LGGG+ + Q +K+ Sbjct: 205 TELQPFDDAFGRLGELIADLRSDGHAIDHIDLGGGLGIPYVADNDPPPHPDAYAQVVKKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +K +I EPG I N L + V+ + E + K+ +IVD+ + + L Sbjct: 265 VDKLDCKIVFEPGRLIAGNAGILVSKVIYLKEGDDKHFLIVDAGMNDLIRPTLYDAYHEV 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 TA V G C GD + ++ GD I+ Y + +N Sbjct: 325 RPVREPADDTPRMTADVVGPVCETGDYLAQLRELPRLQSGDLIAVYSAGAYGAVQSGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + N D S ++ Sbjct: 385 SRPLIPEVLVNKDEFAVIRPRPSLDEMI 412 >gi|119384752|ref|YP_915808.1| diaminopimelate decarboxylase [Paracoccus denitrificans PD1222] gi|119374519|gb|ABL70112.1| diaminopimelate decarboxylase [Paracoccus denitrificans PD1222] Length = 421 Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats. Identities = 51/390 (13%), Positives = 112/390 (28%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ L + + A+K + + L G S Sbjct: 25 VGTPVYVYSAATLTRHFKLFQQALAWTDHLVCFAVKANSNIAVLKLLGDLGAGMDIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E GE ++ + A+ + +L A + Sbjct: 85 EYARARAAGVPGERIVFSGVGKLEPEMRMALEGGIRQFNVESEPELELLSRVASSMGVEA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I +R+NP V + ++ G E V G+ H + Sbjct: 145 PIAVRVNPDVDARTHEKIATGKSENKFGIPIARAREVYAHAARLPGIKVVGIDMHIGSQL 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 + + + +I + +GGG+ + + Q +++ Sbjct: 205 TDLEPYRQAYAKMAELTRALRADGHRITRLDMGGGLGIPYRRDNNAPPLPIEYGQVIRDA 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N L ++V+ + + ++ +I+D+++ + + Sbjct: 265 VGDLGCEIEIEPGRNIAGNAGILLSSVIYLKQGEGRDFLILDAAMNDLIRPAMYSAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C GD F + + GD ++ Y + +N Sbjct: 325 VPVREAAPGAEVAPHDVVGPVCETGDTFQKAVELPALGPGDLVALRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D + + Sbjct: 385 SRPLVPEVLVSADQFAVIRARPTLEEMLGR 414 >gi|148262316|ref|YP_001229022.1| diaminopimelate decarboxylase [Geobacter uraniireducens Rf4] gi|146395816|gb|ABQ24449.1| diaminopimelate decarboxylase [Geobacter uraniireducens Rf4] Length = 417 Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats. Identities = 58/385 (15%), Positives = 116/385 (30%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ + L + + ++K + + G S Sbjct: 25 VGSPVYIYSQATLERHFKAMDEAFAAVPHTICYSVKANSNLAVVKNFINLGGGVDIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y+ K + N + +L + + A ++ KK Sbjct: 85 ELYRALKAGVDPQKVVYSGVGKKDDEIEYALNTGILMFNVESEQELTRISEIASRMGKKA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCE- 168 G+ R+NP V ++ G + IE + + G+ H + Sbjct: 145 GIAIRVNPDVDPQTHPYITTGLKNAKFGITIERAIEEYRRAKDLPGIEILGIDCHIGSQL 204 Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223 F+ LKN+ +++ LGGG+ D + ++ Sbjct: 205 TKVTPFVDAIKKLKNVINTLKGMGISLKYFDLGGGLGIQYNDEAPPLPADYGTEILAETK 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHVPDYLLYQES---A 279 + + EPG +V N L T L + + N +++D+ + L Sbjct: 265 DLGLHLLFEPGRNLVGNAGILVATCLYTKQRDEKNFIMIDAGMNDLARPALYGSYHGVKP 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G A + G C +GD + K GD ++F Y + +N Sbjct: 325 VVNDQDGVIVADIVGPICESGDFLAKDREVPMFKQGDMMAFMSAGAYGFAMSSSYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + D + D Sbjct: 385 VAEVMVKGDRFEVVRERETVEDLIK 409 >gi|260913224|ref|ZP_05919706.1| diaminopimelate decarboxylase [Pasteurella dagmatis ATCC 43325] gi|260632811|gb|EEX50980.1| diaminopimelate decarboxylase [Pasteurella dagmatis ATCC 43325] Length = 416 Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats. Identities = 66/384 (17%), Positives = 120/384 (31%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFDKALGKHPHLICFAVKSNPNIAILNVMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A +V++L++ A +L K Sbjct: 86 LERVLVAGGDANKIVFSGVAKTETEIARALEVGIRCFNVESVAELHRINQVAGELGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGISVDEAREVYRLASQLPHIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + K+ Q++ + LGGG+ T +P + L++ S+ Sbjct: 206 ELQPFLDATDRLIVLMKQLKEDSIQLKHLDLGGGLGVTYTDETPPHPTEYASALLEKLSD 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L T V + N IVD+ + + L I Sbjct: 266 YPDLEIILEPGRAITANAGILVTKVEYLKHNENRHFAIVDAGMNDMIRPALYQAYMNIIE 325 Query: 283 PN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P V G C D G+ + GD I+ Y + + +N + Sbjct: 326 IDRTLARKPQVYDVVGPICETSDFLGKQRTLA-IAEGDYIAQRSAGAYGASMSSNYNSRS 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + + R + Sbjct: 385 RTAEVMVDGEQVHLIRRREKLEEL 408 >gi|163803627|ref|ZP_02197492.1| diaminopimelate decarboxylase [Vibrio sp. AND4] gi|159172575|gb|EDP57435.1| diaminopimelate decarboxylase [Vibrio sp. AND4] Length = 417 Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats. Identities = 56/378 (14%), Positives = 106/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGDAKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVVAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V ++ G NV G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPAVYQFAQSLPNLNVQGIDCHIGSQLT 206 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + I + +GGG+ P L Sbjct: 207 EIEPFIDATDRLLTLIDGLKAQGIDIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLEN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C GD G+ ++ GD ++ Y + +N Sbjct: 327 VVPREGETQNYDLVGPICETGDFLGKDRALA-LQEGDLLAVRSAGAYGFVMSSNYNTRTR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + + + Sbjct: 386 AAEVMVDGNQSHLVRQRE 403 >gi|262402317|ref|ZP_06078878.1| carboxynorspermidine decarboxylase putative [Vibrio sp. RC586] gi|262351099|gb|EEZ00232.1| carboxynorspermidine decarboxylase putative [Vibrio sp. RC586] Length = 377 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 163/368 (44%), Positives = 242/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVKEVIDICDKMIFNSQSQLAAYRHLVEGKA-SLGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + E ++G+MFH NCENK F +L Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDEGVFDTIDGVMFHMNCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V LK F+E+++VQ+YLEPGEA++T T Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVDKLGAALKAFAERHAVQLYLEPGEAVITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+++G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 305 GDQFCVAKFDEPLQVGQQLHILDSAGYTMVKLNWFNGLKMPSVYCERQNGEIQKINQFGY 364 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 365 EDFKRTLS 372 >gi|171910232|ref|ZP_02925702.1| diaminopimelate decarboxylase [Verrucomicrobium spinosum DSM 4136] Length = 433 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 62/401 (15%), Positives = 122/401 (30%), Gaps = 39/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K+ + ++ + A+K + + T+ G S E Sbjct: 26 GTPLYVYSKETITDHYKRLDGALDRLDHLICYAVKANSNLAILQTIADLGGGFDIVSGGE 85 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + + + K + ++L + + A L Sbjct: 86 LYRVIQAGGRASQCTFAGVGKTRAEIEYALQQGIYSFNAESEAELRQINEVAGTLGKKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCEN 169 + LR+NP+V + ++ G +++ ++ GL H + Sbjct: 146 VALRVNPNVDAKTHKYISTGKSENKFGVDFDRILDAYAAIATECEHLDIRGLQMHIGSQL 205 Query: 170 KSFLCFSAMLKNIEKEFGHFI--TQIEWISLGGGIHFTDK-------------------D 208 S F K + I++ S+GGG+ + Sbjct: 206 TSIDPFVEAAKKVAPLVEKLKERHHIKFFSIGGGLGIVYRESLDSGDQTWWGEKEEAERP 265 Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEA 267 ++ + L E ++I LEPG +V N L + VL + + N K VIVD+ + Sbjct: 266 LTIQSYADALVPILEPLKLRILLEPGRFMVGNAGALLSKVLYLKKGNAKKFVIVDAGMND 325 Query: 268 HVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + L + V G C GD + PV+ GD ++ Sbjct: 326 LIRPALYEGWHQITPLHKAEGAELEKVDVVGPICETGDFLAQDRELPPVQAGDTLAVLSA 385 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N + + + + +D Sbjct: 386 GAYGFTMASNYNSRPLAAEILVDGAEAHLVRERQTLDDLVR 426 >gi|315635221|ref|ZP_07890498.1| diaminopimelate decarboxylase [Aggregatibacter segnis ATCC 33393] gi|315475967|gb|EFU66722.1| diaminopimelate decarboxylase [Aggregatibacter segnis ATCC 33393] Length = 416 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 58/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFNNAFGEHPHLVCFAVKSNPNIAILNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K + A N + ++L + A Sbjct: 86 LERVLAAGGDAAKVVFSGVAKSRQEIARALEVNIRCFNVESEAELLRINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVEQAREVYKLAATLPNIKIVGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + ++ ++ + LGGG+ T +P + ++ S Sbjct: 206 ELQPFLDAVDRLIVLMEQLNQDGIHLKHLDLGGGLGVTYTDETPPHPTEYAKALWEKLSA 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I +EPG AI N L T V + +N I D+ + + L + Sbjct: 266 FSELEIIVEPGRAITANAGILVTKVEYLKSNESRNFAIADAGMNDMIRPALYQAYMNILE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD ++ Y + + +N Sbjct: 326 IDRTLAREEKIYDVVGPICETSDFLGKQRKLA-IAEGDYLAQRSAGAYGASMSSNYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D R + N+ Sbjct: 385 RTAEVMVDGDKAYLIRRREALNEL 408 >gi|168704235|ref|ZP_02736512.1| diaminopimelate decarboxylase [Gemmata obscuriglobus UQM 2246] Length = 437 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 67/405 (16%), Positives = 129/405 (31%), Gaps = 43/405 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L+ NL+ ++A + ++K + + Q+ G +S E Sbjct: 26 GTPLYVYSEAALVANLNEVQTAFRDANPVICYSVKANGNLSICRLMGQHGSGFDVTSQGE 85 Query: 63 VMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKL--HKK 117 + + V D EI+ L N + +L+ AQKL Sbjct: 86 FQRALKAGPAAAKVVFAGVGKTDSEIEFALKNGVFLFDVESEQELHAIGAVAQKLGVKAD 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LR+NP + + D + + G + ++ +V GL H Sbjct: 146 VALRVNPDLPPKTHVKTDTSVKGVKFGLDIETIVDVAKGVVGHPGLSVVGLHMHLGSPIL 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + + K+F I+++++GGG + P F + ++ Sbjct: 206 KADPYRMGAEKGLGLIKQFRAQGHDIKYLNMGGGFGINYRKDEAKPASAFADVILPVVKE 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES----- 278 Q+ LEPG IV N L + V+ K+ VI D+++ + L Sbjct: 266 SGCQLILEPGRFIVGNAAVLLSRVVFTKSTGGKHYVIQDAAMNDLIRPTLYGSFHRIWPV 325 Query: 279 -------------------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + V G C +GD + + GD ++ Sbjct: 326 APAAGVPVTPDVNGDPDDPQPFREMPNCFKQDVVGPVCESGDYLAKDRPLPGLTRGDLLA 385 Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + R ++ D Sbjct: 386 VFSAGAYGMTMSSNYNSRCRAAEVLVSGRTHRLIRRRETFADLVA 430 >gi|327313487|ref|YP_004328924.1| carboxynorspermidine decarboxylase [Prevotella denticola F0289] gi|326946094|gb|AEA21979.1| carboxynorspermidine decarboxylase [Prevotella denticola F0289] Length = 388 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 115/375 (30%), Positives = 199/375 (53%), Gaps = 14/375 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++ +L +NL ++ AGV+++LA K +A W F +Y+ TT+SSLYE Sbjct: 14 PMYVLEEARLRDNLALIAHVANEAGVEIILAFKAYALWRTFPIFREYIKATTASSLYEAR 73 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--GLRI 122 LG E+FG TH ++ Y D EID + ++FN+++Q ++ + + ++++ GLR+ Sbjct: 74 LGFEEFGAPTHTFSPGYTDYEIDEIARCSSHLVFNSLTQYERYHIRTRLENERLSLGLRV 133 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S + ++ +P P +R G + +++G H +CE+ S F L +I Sbjct: 134 NPEYSEVETLIYNPCAPGTRFGISSDRLPDRLPDDIDGFHIHCHCESGS-DVFERTLAHI 192 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E++F + Q++W++ GGG T KDY V + L++F +Y ++ LEPG A T Sbjct: 193 EEKFAGWFPQLKWVNFGGGHLMTRKDYDVPRLIRTLRDFKRRYPWLKVILEPGSAFAWQT 252 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN---------TGPYTAM 291 L V+D+ E+ V + S H+PD L + G +T Sbjct: 253 GPLVAQVVDVVEDHGIKTAVLNVSFTCHMPDCLEMPYHPAVRNACLADEDGSAKGEHTYR 312 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + SCL+GD G + F+ ++ G+ I FED+ Y + N FNGI+ P IA+ + D + Sbjct: 313 LGANSCLSGDWMGSWTFDHALQAGENIIFEDMLHYTTVKTNMFNGISHPAIALLHPDNEL 372 Query: 352 KAIREFSYNDYYNNL 366 + +RE++Y DY + + Sbjct: 373 EVLREYTYEDYRDRM 387 >gi|311109535|ref|YP_003982388.1| diaminopimelate decarboxylase [Achromobacter xylosoxidans A8] gi|310764224|gb|ADP19673.1| diaminopimelate decarboxylase 2 [Achromobacter xylosoxidans A8] Length = 430 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 127/388 (32%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + L ++ V + +K + + + G S Sbjct: 38 LGTPLYVYSRAALKAAWESYRNAVGQHPVLVCYGMKANSNLAVLKEFARLGAGFDIVSGG 97 Query: 62 EVMLGH-EKFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ + E+ A L+ + ++L + + A + Sbjct: 98 ELKRALAAGADPSRIVFSGVGKQAWEMRAALAAQVKCFNVESEAELRRLSEVAHGMGLRA 157 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LR+NP V ++ G + ++ ++ G+ H + Sbjct: 158 PVSLRVNPDVDAQTHPYISTGLKENKFGIAIESALDVYRSAQSLPGLDIVGVDCHIGSQL 217 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 + L+ ++ ++ +I + LGGG+ D L E+ Sbjct: 218 TDISPYFDALEKLLDLIEKLDQAGIRIAHLDLGGGLGIRYTDEIPPSPQVLLDRVFERLN 277 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES- 278 +Q+ LEPG ++V N L T V + + +N IVD+++ + L Sbjct: 278 ARGFGHLQLVLEPGRSLVGNAGVLLTRVQYLKHSEARNFAIVDAAMNDLLRPALYEAFHG 337 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + G C + D + ++ GD ++ E Y++ + +N Sbjct: 338 VRPVHPRAGDATLYDIVGPVCESADWLAKQRKLA-IEQGDLLAVESTGAYSMAMASNYNA 396 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 A+ + D + + +D Sbjct: 397 RPRAAEAMVDGDKYYVVRQRETLDDLLR 424 >gi|218709932|ref|YP_002417553.1| carboxynorspermidine decarboxylase [Vibrio splendidus LGP32] gi|218322951|emb|CAV19128.1| carboxynorspermidine decarboxylase [Vibrio splendidus LGP32] Length = 383 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 168/368 (45%), Positives = 241/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS Y Sbjct: 12 LKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPY 71 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LGHE FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + +GLR Sbjct: 72 EVKLGHETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SLGLR 130 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + +NG+MFH NCENK F +L + Sbjct: 131 LNPGVSYAGQDLANPARQFSRLGVQADHIKPELFDEINGVMFHMNCENKDVDAFIGLLDS 190 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FG + +++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 191 ISEQFGEHLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 250 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A++ G + ++ SCLA Sbjct: 251 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHDYVIGSCSCLA 310 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F E F++P+ IG ++ D AGY + + NWFNG+ MP+I + +G ++ + EF Y Sbjct: 311 GDQFCEVSFDEPLNIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYCERSNGDVQKLNEFGY 370 Query: 360 NDYYNNLS 367 D+ +LS Sbjct: 371 EDFKRSLS 378 >gi|302346428|ref|YP_003814726.1| carboxynorspermidine decarboxylase [Prevotella melaninogenica ATCC 25845] gi|302150386|gb|ADK96647.1| carboxynorspermidine decarboxylase [Prevotella melaninogenica ATCC 25845] Length = 388 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 123/375 (32%), Positives = 203/375 (54%), Gaps = 14/375 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++ +L NL+ ++ K A V+++LA K +A W F +Y+ TT+SSL+E Sbjct: 14 PMYVLEEARLRENLNLIAHVAKEADVEIILAFKAYALWRTFPIFREYIKATTASSLFEAR 73 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRI 122 LG E+FG TH ++ Y D EID + ++FN+++Q +F +A+ ++K GLR+ Sbjct: 74 LGFEEFGAPTHTFSPGYTDYEIDDIARCSSHLVFNSLTQYERFHVRAKIENEKLSFGLRV 133 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S + ++ +P P +R G E+ ++++G H +CE+ S F L +I Sbjct: 134 NPEYSEVETLIYNPCAPGTRFGISSDKLPETLPEDIDGFHIHCHCESGS-DVFERTLVHI 192 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E++F + Q++WI+ GGG T KDY VK L+ F ++Y ++ LEPG A T Sbjct: 193 EEKFAKWFPQLKWINFGGGHLMTRKDYDVKRLIHVLRGFRKRYPWLKVILEPGSAFAWQT 252 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT---------GPYTAM 291 L V+DI E+ + ++S H+PD L TI G YT Sbjct: 253 GPLVVQVVDIVEDHGIKTAILNASFTCHMPDCLEMPYHPTIRNAKLVDEDGSAKGEYTYR 312 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + SCL+GD G + F +++G+ I FED+ Y + N FNGI+ P IA+ + D + Sbjct: 313 LGANSCLSGDWMGSWDFGHTLEVGENIIFEDMLHYTTVKTNMFNGISHPAIALLHTDNEL 372 Query: 352 KAIREFSYNDYYNNL 366 + +RE++Y DY + + Sbjct: 373 EMLREYTYEDYRDRM 387 >gi|268678856|ref|YP_003303287.1| diaminopimelate decarboxylase [Sulfurospirillum deleyianum DSM 6946] gi|268616887|gb|ACZ11252.1| diaminopimelate decarboxylase [Sulfurospirillum deleyianum DSM 6946] Length = 401 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 113/384 (29%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D + + + K + A+K + + + G S+ E Sbjct: 12 GTPLYLYDFDSITHKFSALKDVFKARKSLICFAVKSNSNLSVLKHMAHLGAGCDCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119 V ++ K + D + + ++ + + AQKL Sbjct: 72 VKRALLAGIPKYKIIFSGVGKRDDEIEEALRNDILMLNLESEEEMKRVEIIAQKLGVVAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + R+NP++ ++ G + I + G+ FH + Sbjct: 132 ISIRVNPNIDPKTHPYISTGLHENKFGVDIESAKRMYIHAKNSASLDPVGIHFHIGSQIT 191 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 F + I++ +GGGI K+ + D+ Q + Sbjct: 192 DVNPFKEAADVLANLVRNLKALKIDIKFFDVGGGIGIQYKEEETIALYDYAQSIFAALGG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 V + EPG +V + T VL N K VIVD ++ + L A Sbjct: 252 LDVTLVCEPGRYLVGDCGYFLTKVLYEKYNGFKRFVIVDGAMNDLIRPSLYQAYHAIEVE 311 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 V G C +GD + ++ D + + Y + +N Sbjct: 312 GKEGTEKSLCDVVGPVCESGDFLAKNIELPALEHDDILVVKSAGAYGFTMSSNYNTRMRV 371 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 R ++ D Sbjct: 372 AEVALENGEDRLIRRRETFEDVIA 395 >gi|156972658|ref|YP_001443565.1| diaminopimelate decarboxylase [Vibrio harveyi ATCC BAA-1116] gi|156524252|gb|ABU69338.1| hypothetical protein VIBHAR_00310 [Vibrio harveyi ATCC BAA-1116] Length = 417 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 109/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWNAFDSAVGQYPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGDAKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVVAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V ++ G NV G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPAVYKFAQSLPNLNVQGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + I + +GGG+ P L Sbjct: 207 EIEPFIDATDRLLALIDDLKAQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLEN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 +T + G C GD G+ ++ GD ++ Y + +N Sbjct: 327 VSPREGEAHTYDLVGPICETGDFLGKDRALV-LQEGDLLAVRSAGAYGFVMSSNYNTRTR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + + + Sbjct: 386 AAEVMVDGNQSHLVRQRE 403 >gi|291549276|emb|CBL25538.1| carboxynorspermidine decarboxylase [Ruminococcus torques L2-14] Length = 405 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 126/379 (33%), Positives = 200/379 (52%), Gaps = 15/379 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IKTP Y++D++ L+ N + + G K+LLA K F+ + + Y+ GT +S LY Sbjct: 24 IKTPCYILDEKALIENAKLLGEVAERTGCKMLLAQKAFSNYDCYPFFEPYLAGTEASGLY 83 Query: 62 EVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E LG E+ G E H + Y+ E + +L D I+FN+ SQL +F A++ K +GL Sbjct: 84 EARLGAEEMAGKEVHVFCAGYRADEFEELLQYADHIVFNSPSQLLRFGRMAKEAGKSVGL 143 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173 RINP S + DP SR+G E+ +KN ++G+ FH CE S Sbjct: 144 RINPECSTQEGHEIYDPCAQGSRMGTTRVQWDEAIVKNPELMELLDGVHFHTLCEQDSDD 203 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 L +++K+FG I +++WI+ GGG H T Y ++ Q ++ E++ V++YLEP Sbjct: 204 -LETTLASVKKQFGDLIAKVKWINFGGGHHITRPGYDIERLEQCIRMAQEEWKVEVYLEP 262 Query: 234 GEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 GEA N L T+VLD+ + IVD+S H+PD L + + Sbjct: 263 GEAWALNAGFLLTSVLDVLKNGDTQIAIVDASAACHMPDVLEMPYRPPLLGASDETTDSG 322 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 T + G +CL+GD+ G++ F K + GD + F D+A Y + N FNG+++P I +++ Sbjct: 323 ITVRLGGPTCLSGDVIGDYKFSKLPEYGDLLLFGDMAIYTTCKNNTFNGMSLPDIWIRHA 382 Query: 348 DGTIKAIREFSYNDYYNNL 366 D T++ + F Y D+ L Sbjct: 383 DRTMQQLTAFDYTDFKERL 401 >gi|84500205|ref|ZP_00998471.1| diaminopimelate decarboxylase [Oceanicola batsensis HTCC2597] gi|84392139|gb|EAQ04407.1| diaminopimelate decarboxylase [Oceanicola batsensis HTCC2597] Length = 421 Score = 238 bits (608), Expect = 9e-61, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 116/390 (29%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+YL L + + A+K + + TL G S Sbjct: 25 VGTPFYLYSTATLTRHFQLFDDALSGLPHLVCYAMKAASNQAILRTLADLGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E GE ++ K +A+ + +L + A + Sbjct: 85 EYARARAAGVPGERIVFSGVGKTRVEMREALAGGIRQFNIESEPELEALNEVALSMGVVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNNCEN 169 + +R+NP V + ++ G E + + + G+ H + Sbjct: 145 PVTVRVNPDVDARTHAKIATGKSENKFGIPISRAREVYARIAALPGLEAIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 + + ++ I + LGGG+ D+ + + E Sbjct: 205 TDLEPYRQAFEKVGDLTDALRADGHDIRRLDLGGGLGIPYTRGNEPPPLPMDYGKLIAET 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 +I +EPG + N + + V+ + ++ D ++ + + Sbjct: 265 LGDKGCEIEIEPGRLVAGNAGIMVSRVIYVKSGEGRDFLILDGAMNDLIRPAMYEAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + G C +GD F P++ GD ++F Y + +N Sbjct: 325 VPVVEAEAGIEYRPYDIVGPVCESGDTFARQRMMPPLEAGDLVAFRSAGAYGAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + N S+++ N Sbjct: 385 TRPLIPEVLVNGHQFAVIRPRPSFDEIINR 414 >gi|254230109|ref|ZP_04923505.1| diaminopimelate decarboxylase [Vibrio sp. Ex25] gi|262392884|ref|YP_003284738.1| diaminopimelate decarboxylase [Vibrio sp. Ex25] gi|151937354|gb|EDN56216.1| diaminopimelate decarboxylase [Vibrio sp. Ex25] gi|262336478|gb|ACY50273.1| diaminopimelate decarboxylase [Vibrio sp. Ex25] Length = 417 Score = 238 bits (608), Expect = 9e-61, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 108/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGDPKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVIAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V ++ G + NV G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPDVYKFAQSLPNLNVQGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + F + + I + +GGG+ P L Sbjct: 207 NIDPFIDATDRLLALIDDLKAQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLEN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C GD G+ ++ GD ++ Y + +N Sbjct: 327 VSPRTGEAQTYDLVGPICETGDFLGKDRALV-LQEGDLLAVRSAGAYGFVMSSNYNTRTR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + + Sbjct: 386 AAEVMVDGKQSHLVRQRE 403 >gi|145634864|ref|ZP_01790572.1| diaminopimelate decarboxylase [Haemophilus influenzae PittAA] gi|145268030|gb|EDK08026.1| diaminopimelate decarboxylase [Haemophilus influenzae PittAA] Length = 415 Score = 238 bits (608), Expect = 9e-61, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L I Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D + R + + Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408 >gi|319639010|ref|ZP_07993768.1| diaminopimelate decarboxylase [Neisseria mucosa C102] gi|317399914|gb|EFV80577.1| diaminopimelate decarboxylase [Neisseria mucosa C102] Length = 406 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L D + A+K + G S E Sbjct: 18 GTPLYVYSKSALTEAFDNYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G +T V + EI+ A+ + ++ ++++ + A +L K Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKVAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHASSQSHLKIVGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I + +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLIEACERILALVDQLVEEGIVLEHLDLGGGVGIVYQDENVPDLGSYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGSSMASNYNTRNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + G + + N Sbjct: 377 AEVLVDGSGYKLIRQRETVEQQMAN 401 >gi|301155478|emb|CBW14944.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus parainfluenzae T3T1] Length = 416 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 118/384 (30%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ + + + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFDSALGDHPHLICYAVKANSNIGILNVMAKLGSGFDIVSQGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + E ++ K + A+ +V++L+ A Sbjct: 86 LERVLEAGGEASKVVFSGVAKSRAEIMRALEVGIRCFNVESVAELHHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYKLAATLPHVRITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + + ++ + LGGG+ T +P L + Sbjct: 206 ELQPFLDATDRLIRLIEQLQEDGITLKHLDLGGGLGVTYTDETPPHPSDYAAALLNKLKG 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +++I LEPG AI N L V + +N I D+ + + L I Sbjct: 266 YENLEIILEPGRAIAANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLGREKAIYDVVGPVCETSDFLGKQRELA-IAEGDYIAQRSAGAYGASMSSNYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D R ++++ Sbjct: 385 RTAEVLVDGDKAHLIRRRENFSEL 408 >gi|307823078|ref|ZP_07653308.1| diaminopimelate decarboxylase [Methylobacter tundripaludum SV96] gi|307735853|gb|EFO06700.1| diaminopimelate decarboxylase [Methylobacter tundripaludum SV96] Length = 415 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 63/383 (16%), Positives = 120/383 (31%), Gaps = 24/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ + L + + A+K + + + L + G SL E Sbjct: 26 GSPCYIYSRATLERHWKAFDQAFGEQAHLICYAVKANSNIAILNLLARLGSGFDIVSLGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ +D + A+ +L++ A +L Sbjct: 86 LERVITAGGDPKKIVFSGVGKREDEILAALKIGIRCFNIEVSGELDRINRLAGQLGVIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC--- 167 + R+NP V ++ G + + + V G+ H Sbjct: 146 VSFRVNPDVDAKTHPYISTGLKENKFGIDIQQALTEYRRAAAMPHISVIGIDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 E + FL + ++ ++ + LGGG+ KD + + ++ + Sbjct: 206 ETRPFLDALDKILDLVAALEAEGIKLHHLDLGGGLGICYKDEQPPEPAEYIQAVLARLGQ 265 Query: 226 -SVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATI-- 281 +I LEPG AIV N L T V + KN IVD+++ V L I Sbjct: 266 TDFEILLEPGRAIVGNAGILVTQVEYLKPTANKNFAIVDAAMNDLVRPALYSAWQNIIPV 325 Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 N T + G C GD G+ + GD ++ Y + +N Sbjct: 326 NRQNNAAEATWDIVGPVCETGDFLGKDRTL-KIAQGDLLAIRSSGAYGFTMSSNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 + + + Sbjct: 385 LAELIVDGSNLHVIRERETIAQL 407 >gi|92115227|ref|YP_575155.1| diaminopimelate decarboxylase [Chromohalobacter salexigens DSM 3043] gi|91798317|gb|ABE60456.1| diaminopimelate decarboxylase [Chromohalobacter salexigens DSM 3043] Length = 418 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 61/381 (16%), Positives = 116/381 (30%), Gaps = 24/381 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A+K + + D L + G S E Sbjct: 26 GTPCYVYSRATFTRHFKAYSDALGDHPHLICYAVKANSNLAVLDLLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K A+ ++ +L + A + Sbjct: 86 LERVLAAGGDPAKVVFSGVAKQAGEMARALEVGIKCFNVESLPELERLNQVAGECGQVAR 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 + LR+NP V ++ G + + + GL H + Sbjct: 146 VSLRVNPDVDAKTHPYISTGLKANKFGIAVDEAFAVYQRAAELPNLEIVGLDCHIGSQLT 205 Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 FL L + IE + LGGG+ +D D+ + L E + Sbjct: 206 ELAPFLDALDRLLILLDRLNEAGITIEHLDLGGGLGVPYQDEQPPAPYDYARALLERLDG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQESATI 281 + + EPG +I N + T V + ++ IVD+ + + L +Q + Sbjct: 266 RDLTLLFEPGRSIAANAGVMLTRVEYLKPGETQHFAIVDAGMNDLIRPALYQAWQRIVPV 325 Query: 282 YPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T V G C GD G+ + GD ++ Y + +N Sbjct: 326 DTRQARETAVYDVVGPVCETGDFLGKARELA-IAPGDLLAVRSAGAYGFVMASHYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYN 360 P + + D + + Sbjct: 385 PAELMVDGDNVQVVRERETLD 405 >gi|308069561|ref|YP_003871166.1| diaminopimelate decarboxylase [Paenibacillus polymyxa E681] gi|305858840|gb|ADM70628.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Paenibacillus polymyxa E681] Length = 455 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 70/400 (17%), Positives = 136/400 (34%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+Q + + + G ++ A K F M + S Sbjct: 30 GTPLYIVDEQLVRRRCREFIEAFRETGLKFQVAYASKAFCVMAMCALAAEEGMSLDVVSS 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K E + + + ++ +L+ + A + ++ Sbjct: 90 GELFTALQAGFPAERIHFHGNNKTPEEIEMALDAQIGCFVVDSEMELHLLQALASEKEQQ 149 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 I LR+ P V + S+ G + IE + N+ G+ H Sbjct: 150 VNILLRVTPGVEAHTHEYMATGQEDSKFGFDIGNGTARQAVEQAIELDHLNLLGVHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVK----DFCQRL 218 + F + + Q+ + I+LGGG + + Q + Sbjct: 210 SQIFEVNGFQMAAERVAAFSREIKEQLQFSFKVINLGGGFGIRYTEEDTPLKVSTYVQAI 269 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 E + Y +I++EPG +IV ++ T TV I + + V + + Sbjct: 270 GEAVKTYFSGLYDELPEIWIEPGRSIVGDSGTTLYTVGSIKDIPQVRKYVSVDGGMTDNP 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + +T T + G+ C +GD+ + GD ++ Sbjct: 330 RPALYQAKYEAMLANRAQDTNEETVSIAGKCCESGDMLIWDVELPRINSGDLLAVASTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P + N +R +Y D N Sbjct: 390 YNYSMASNYNRIRRPAVVFVNNGEAELVVRRETYEDIVRN 429 >gi|296122026|ref|YP_003629804.1| diaminopimelate decarboxylase [Planctomyces limnophilus DSM 3776] gi|296014366|gb|ADG67605.1| diaminopimelate decarboxylase [Planctomyces limnophilus DSM 3776] Length = 447 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 59/393 (15%), Positives = 126/393 (32%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ K LL+ L + ++K + G+ + S E Sbjct: 49 GTPCWIYSKAMLLHQLGQIQQAFAAVNPVICFSVKANSNLGILKVMRDAGSSFDVVSGGE 108 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKL--HKK 117 + + K + ++F+ + +L+ A+K+ Sbjct: 109 LYRVKKAGADTAKVVFAGVGKTDAEIQLALENQILMFDVESEPELDAIAAVAEKMGVIAP 168 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170 + LR+NP + + ++ G + +++ + G+ H Sbjct: 169 VALRLNPDIDAKTHAKTTTGKKGNKFGMDIERVFELADKVLKTPRLKLVGIHMHLGSPIL 228 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEK 224 + + + ++ +I W++LGGG + + P ++ + + ++ Sbjct: 229 TTEPYELAGQKAIEVTRDLRARGHEIGWVNLGGGFGISYRGSEGLPASEYAKVIVPAVQE 288 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYP 283 VQ+ LEPG I N L + V+ VI D+++ + + Sbjct: 289 MGVQLALEPGRFITGNAGILVSEVVYTKREGGKLFVIQDAAMNDLMRPAMYDAFHKIWPV 348 Query: 284 NTGPYT------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 V G C +GD F + + PV+ GD IS Y + Sbjct: 349 KAAAEPANYEGKIEGCEACDVVGPVCESGDYFAKGRYLPPVQRGDLISIFSAGAYGTSMS 408 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + + R +Y+D Sbjct: 409 SNYNSRPRAVELLVDQGHVQVVRRRETYDDLIA 441 >gi|332704148|ref|ZP_08424236.1| diaminopimelate decarboxylase [Desulfovibrio africanus str. Walvis Bay] gi|332554297|gb|EGJ51341.1| diaminopimelate decarboxylase [Desulfovibrio africanus str. Walvis Bay] Length = 420 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 68/384 (17%), Positives = 113/384 (29%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + ++K + + L G S E Sbjct: 26 GTPLYVYSKATFSRHFQAFDSAFSALPHITCYSVKANSNLCVLRLLASLGAGMDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E Y+ + A+ + + +L A + + Sbjct: 86 LHRALKAGVSPEKIVYSGVGKRPEEIRQALDAGILMFNVESREELRTISAIASESGRIAR 145 Query: 120 --LRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCENK 170 LRINP V ++ G E + G+ H + Sbjct: 146 ISLRINPDVDPKTHPYISTGMKKNKFGLDMETSLETYRMAKGLPGIEPVGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEK 224 S F L + I ++ LGGG+ T + L E + Sbjct: 206 SIEPFLEALDKLVEFYGKLREMGIDIRYLDLGGGLGITYNEEEPPHPEAFGKALTERLKG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES---AT 280 + I LEPG I N L T VL K+ VIVD+++ V L Sbjct: 266 LPLTIILEPGRVIAGNAGILVTKVLYTKSTPSKDFVIVDAAMNDLVRPSLYGSFHRIAEV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + N V G C +GD V+ G+ ++ Y + +N Sbjct: 326 VEHNRPKINVDVVGPICESGDFLARDRELPNVESGELLAAFSAGAYGFAMSSQYNSRPRA 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + T+ A R +Y+D Sbjct: 386 AEVMVDGEVTVLARRRETYDDLVA 409 >gi|325860318|ref|ZP_08173440.1| carboxynorspermidine decarboxylase [Prevotella denticola CRIS 18C-A] gi|325482197|gb|EGC85208.1| carboxynorspermidine decarboxylase [Prevotella denticola CRIS 18C-A] Length = 388 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 116/375 (30%), Positives = 198/375 (52%), Gaps = 14/375 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++ +L +NL ++ AGV+++LA K +A W F +Y+ TT+SSLYE Sbjct: 14 PMYVLEEARLRDNLALIAHVANEAGVEIILAFKAYALWRTFPIFREYIKATTASSLYEAR 73 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--GLRI 122 LG E+FG TH ++ Y D EID + ++FN+++Q ++ + + ++++ GLR+ Sbjct: 74 LGFEEFGAPTHTFSPGYTDYEIDEIARCSSHLVFNSLTQYERYHIRTRLENERLSLGLRV 133 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S + ++ +P P +R G + +++G H +CE+ S F L +I Sbjct: 134 NPEYSEVETLIYNPCAPGTRFGISSDRLPDRLPDDIDGFHVHCHCESGS-DVFERTLAHI 192 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E++F + Q++W++ GGG T KDY V + L+ F +Y ++ LEPG A T Sbjct: 193 EEKFAGWFPQLKWVNFGGGHLMTRKDYDVPRLIRTLRNFKRRYPWLKVILEPGSAFAWQT 252 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN---------TGPYTAM 291 L V+D+ EN V + S H+PD L + G +T Sbjct: 253 GPLVAQVVDVVENHGIKTAVLNVSFTCHMPDCLEMPYHPAVRNACLADEDGSAKGEHTYR 312 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + SCL+GD G + F+ ++ G+ I FED+ Y + N FNGI+ P IA+ + D + Sbjct: 313 LGANSCLSGDWMGSWTFDHALQAGENIIFEDMLHYTTVKTNMFNGISHPAIALLHPDNEL 372 Query: 352 KAIREFSYNDYYNNL 366 + +RE++Y DY + + Sbjct: 373 EVLREYTYEDYRDRM 387 >gi|328954155|ref|YP_004371489.1| diaminopimelate decarboxylase [Desulfobacca acetoxidans DSM 11109] gi|328454479|gb|AEB10308.1| diaminopimelate decarboxylase [Desulfobacca acetoxidans DSM 11109] Length = 420 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 54/384 (14%), Positives = 109/384 (28%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+YL L ++ + A+K + + G S E Sbjct: 26 GTPFYLYSHATLQHHFQVFDRAFGETPHLVCFAVKSNSNLAILRIFINQGGGVDIVSGGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + Y+ K + + +L A ++ ++ Sbjct: 86 LFRALRAGVAPGKVVYSGVGKRPDEIRYALEQGILMFNIESPQELQVLNQAAGQMGRRAR 145 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 LR+NP V ++ G + + G+ H + Sbjct: 146 IALRVNPDVDPQTHPYISTGLKQNKFGIDIDRSVAEYLIAKQLPHLEIVGVACHIGSQLT 205 Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224 F LK + QI ++ +GGG+ + + + + + Sbjct: 206 QLSPFIETLGRLKELIARLRREDIQIRYLDIGGGLGIQYNEETPPHPVEYGRSIIQELQG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES---AT 280 + LEPG +V N L T VL + I+ D+++ L Sbjct: 266 LDCTLILEPGRVLVGNAGILVTKVLFTKQTEAKYFIIADAAMNDLARPSLYGSYHGIQPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + TA + G C +GD + G+ ++ Y + +N Sbjct: 326 VEKDRREVTASLVGPICESGDFLAKDRLMPAFDPGELVAVMSAGAYGFTMSSNYNSRPRV 385 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y D Sbjct: 386 PEILVHKNEFYVIRQRETYEDLIR 409 >gi|315125206|ref|YP_004067209.1| diaminopimelate decarboxylase [Pseudoalteromonas sp. SM9913] gi|315013719|gb|ADT67057.1| diaminopimelate decarboxylase [Pseudoalteromonas sp. SM9913] Length = 417 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 119/387 (30%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + ++ + A+K + + + L + G S E Sbjct: 26 GTPCYVYSRATFERHYLAFANAAQDHKSLVCYAVKANSNIAVLNILARLGAGFDIVSKGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQ--KLHKK 117 + ++ K + A ++S+L + + A L Sbjct: 86 LARVIKAGGAANKVVFSGVAKTADEIAYALELGIKCFNVESISELERISEVACELNLDAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I +R+NP + ++ G + + N+ G+ H + Sbjct: 146 ISIRVNPDIDAKTHPYISTGLKENKFGIGIETALSVYQHAASLPGLNIVGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F L + E + ++ + +GGG+ T +P + Q + + Sbjct: 206 QTKPFLEALDKLLALIDELKNAGIELSHLDIGGGLGVTYNDEQPPHPSEYAAQVTQRLTN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ EPG AI N L T V I +N + + + LYQ I P Sbjct: 266 YRHLELIFEPGRAIAANAGILVTQVEFIKQNQDKYFAIVDAGMNDMLRPSLYQAWQKIIP 325 Query: 284 NT------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + V G C GD G+ +K GD + Y + +N Sbjct: 326 VSVRDDETPTHNYDVVGPVCETGDFLGKDRPLA-LKQGDLLVQRSAGAYGFTMSSNYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + Y Sbjct: 385 PRVAEIMVDGEQHHLIRERETIESLYQ 411 >gi|255263324|ref|ZP_05342666.1| diaminopimelate decarboxylase [Thalassiobium sp. R2A62] gi|255105659|gb|EET48333.1| diaminopimelate decarboxylase [Thalassiobium sp. R2A62] Length = 422 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 58/391 (14%), Positives = 108/391 (27%), Gaps = 27/391 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+YL LL + + A+K + + L G S Sbjct: 25 VGTPFYLYSAATLLRHFQLFDDALAGVDHLVCFAMKSASNQAILKLLGDAGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E G ++ K + + ++ A L Sbjct: 85 EYARARAAGISGNKIVFSGIGKTRAEMEMALTGGIRQFNVESEPEMLALSAVATDLGVVA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + R+NP V R + G E V G+ H + Sbjct: 145 PITVRVNPDVDAKTHEKIATGRKGDKFGIPISRAREIYAVAAKLPSLKVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKE 220 F + + +I + LGGG+ + + + + Sbjct: 205 TDLAPFKTAYEKVADLTEHLRADGHEISRLDLGGGLGIPYAIGDNDRPPLPAQYGEMIID 264 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA 279 +I +EPG I N L + ++ I ++ D ++ + + Sbjct: 265 TLGHLGCEIEIEPGRLISGNAGILVSQIIYIKSGEDREFMILDGAMNDLIRPAMYGAHHD 324 Query: 280 TIYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I P + G C +GD F + P+ GD ++F Y + + Sbjct: 325 IIPVIEPPAGVDKTPYDIVGPVCESGDTFAKARDMPPMNAGDLVAFRSAGAYGAVMSSEY 384 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N + + D +Y+D N Sbjct: 385 NTRPLIPEVLVMGDQFAVIRPRPTYDDIINR 415 >gi|326796187|ref|YP_004314007.1| diaminopimelate decarboxylase [Marinomonas mediterranea MMB-1] gi|326546951|gb|ADZ92171.1| diaminopimelate decarboxylase [Marinomonas mediterranea MMB-1] Length = 417 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 55/382 (14%), Positives = 114/382 (29%), Gaps = 25/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + + A+K + + + L + G S+ E Sbjct: 26 GTPTYVYSRATFERHYNAYADAFASHPTLVCYAVKACSNIAILNVLAKLGAGFDIVSIGE 85 Query: 63 V-MLGHEKFGGETHAYNV-AYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ ++ A+ + +L + A +L Sbjct: 86 LERVVRAGGDPSKVMFSGLGKQEHEMRRALELGIHCFNVESEPELYRLNKVAGELGVKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + +R+NP V ++ G KD NV G+ H + Sbjct: 146 VSMRVNPDVDAKTHPYISTGLKENKFGIDIKDAPRIYQVANEMAHLNVMGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + +I+ + LGGG+ +D + + +K Sbjct: 206 ELKPFLDTFDRLITLIDELAGLGIEIKHMDLGGGLGVRYRDEVPPEPADYAQLILDKMKG 265 Query: 228 QIY---LEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283 + EPG +I N L T V + ++D ++ + L + Sbjct: 266 RDISLAFEPGRSIAANAGLLLTKVEFLKCTEHKNFAVIDGAMNDLIRPSLYSAWMNIVPV 325 Query: 284 N-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 N G + G C GD G+ ++ GD ++ Y + +N N Sbjct: 326 NLEATSEGKRIYDLVGPVCETGDFLGKDREL-DIQAGDLLAVRSAGAYGFTMASNYNSRN 384 Query: 339 MPTIAVKNVDGTIKAIREFSYN 360 + + D + Sbjct: 385 RAAEVMVDGDVAHLIREREDID 406 >gi|114764059|ref|ZP_01443298.1| diaminopimelate decarboxylase [Pelagibaca bermudensis HTCC2601] gi|114543417|gb|EAU46432.1| diaminopimelate decarboxylase [Roseovarius sp. HTCC2601] Length = 421 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 58/392 (14%), Positives = 121/392 (30%), Gaps = 26/392 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ LL + + A+K + + TL + G S Sbjct: 25 VGTPVYVYSTATLLRHFRLFDEALAWGPHLVCYAMKAASNQAILKTLAEAGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E G+ ++ K A+ + ++ + A +L Sbjct: 85 EYARARAAGVPGDRIVFSGVGKTRAEIRTALEGGIRQFNIESEPEMRAISEVASELGVVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 + +R+NP V + ++ G + V G+ H + Sbjct: 145 PVTVRVNPDVDAKTHAKIATGKSENKFGIPIAKAREVYAEAAALPGLKVVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F+ + + + +I + LGGG+ ++ ++ Sbjct: 205 TELEPFAMAYRKVAELTEALRGDGHEITRLDLGGGLGIPYTRSNEAPPLPVEYGAMIERE 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N L + V+ + E +N +I+D+++ + + Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGILVSEVIYLKEGEGRNFLILDAAMNDLIRPAMYEAHHDI 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + G C +GD F + + GD ++F Y + +N Sbjct: 325 VPVIEPEAGLEQSPFDIVGPVCESGDTFAKGRMMPALGAGDLVAFRSAGAYGAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + D R S+ + N S Sbjct: 385 TRALIPEVLVKGDQFAVIRRRPSFEEIINRDS 416 >gi|261211745|ref|ZP_05926032.1| carboxynorspermidine decarboxylase putative [Vibrio sp. RC341] gi|260839095|gb|EEX65727.1| carboxynorspermidine decarboxylase putative [Vibrio sp. RC341] Length = 377 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 164/368 (44%), Positives = 242/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVKEVIDICDKMIFNSQSQLAAYRHLVEGKA-SLGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + E ++G+MFH NCENK F +L Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDEGVFDTIDGVMFHMNCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V LK F+E+++VQ+YLEPGEA++T T Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVDKLGAALKAFAERHAVQLYLEPGEAVITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G Y ++ SCLA Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEACDNGQYEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+++G ++ D AGY + + NWFNG+ MP++ + +G I+ I +F Y Sbjct: 305 GDQFCVAKFDEPLQVGRKLHILDSAGYTMVKLNWFNGLKMPSVYCERQNGEIEKINQFGY 364 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 365 EDFKRTLS 372 >gi|288927594|ref|ZP_06421441.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 317 str. F0108] gi|288330428|gb|EFC69012.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 317 str. F0108] Length = 390 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 113/377 (29%), Positives = 184/377 (48%), Gaps = 16/377 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++ KL NL+ + A V+++LA K FA W F +Y+ TT+SSL E Sbjct: 14 PMYIVEEAKLRRNLELIASVSARAEVEIILAFKAFALWKTFPIFKEYIRSTTASSLSEAK 73 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRI 122 L E+FG H Y+ AY D EI+ + S + FN+++Q +++ A + GLR+ Sbjct: 74 LAFEEFGSRAHTYSPAYTDDEIEEIASCSSHLTFNSLTQYDRYSTFAKERNASLSFGLRV 133 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S + L +P P +R G + N+ G H +CE+ F+ L +I Sbjct: 134 NPEYSEVETELYNPCAPGTRFGLSAERLPSQLPTNIEGFHCHCHCESG-ADVFARTLAHI 192 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E +F + ++WI+ GGG T KDY V+ L+ F E++ + LEPG A T Sbjct: 193 ESKFSGWFPALKWINFGGGHLMTRKDYDVELLVDTLRSFKERHPHLHVILEPGSAFAWQT 252 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT-----------GPYT 289 L V+DI E+ + + S H+PD L ++ + Sbjct: 253 GPLVAQVVDIVEDKGIQTAILNVSFTCHMPDCLEMPYQPSVRNAQSLDLEAAVNGGAKHI 312 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 + G SCL+GD G + F+ + +G+ + FED+ Y + N FNGI+ P++A+ G Sbjct: 313 YRLGGNSCLSGDFMGSWQFDHALTVGENVIFEDMIHYTTVKTNMFNGISHPSLAIVRTSG 372 Query: 350 TIKAIREFSYNDYYNNL 366 ++ +R + Y DY + Sbjct: 373 ELEMLRTYGYEDYKARM 389 >gi|149926604|ref|ZP_01914864.1| diaminopimelate decarboxylase [Limnobacter sp. MED105] gi|149824533|gb|EDM83749.1| diaminopimelate decarboxylase [Limnobacter sp. MED105] Length = 435 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 62/393 (15%), Positives = 115/393 (29%), Gaps = 32/393 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYI-RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ + + A V + A+K + + L Q G S Sbjct: 39 GTPLYVYSASSIKAAYRAYASACQGLAHVTICYAVKANSNIHILKLLAQEGAGFDIVSAG 98 Query: 62 E-VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E + E + K + + +++ + A+KL + Sbjct: 99 ELARVIAAGGAPEKAVFAGVGKSMQEIEYALGQGVGCFNVESEAEMERVALVAEKLQRKA 158 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169 + LR+NP V ++ G NV+G+ H + Sbjct: 159 NVSLRVNPDVDAKTHPYISTGLKENKFGVSMNAAKRVYQFANAHPWLNVHGIDCHIGSQL 218 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR--------- 217 + L + + +I + LGGGI D + Sbjct: 219 TDASPYFDALDRVLALLDQLSAEGIEINHLDLGGGIGIRYLDETPPTPAEVLPKLIAKVQ 278 Query: 218 -LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLY 275 + + + EPG +IV N L T V + EN K+ IVD+++ + + Sbjct: 279 SWAQAKGRSMPTLSFEPGRSIVGNAGVLLTQVEFLKENEGKHFAIVDAAMNDLMRPAMYK 338 Query: 276 QESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + P+ V G C +GD + ++ GD ++ Y Sbjct: 339 AFHGVVAVQNNPHAAAQEYDVVGPVCESGDWLAKNRTLA-IEQGDYLAILSAGAYGQTMA 397 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + R + D Sbjct: 398 SNYNSRGRAAEVLLENSKVTLIRRRETIEDQLR 430 >gi|307266020|ref|ZP_07547567.1| diaminopimelate decarboxylase [Thermoanaerobacter wiegelii Rt8.B1] gi|306918982|gb|EFN49209.1| diaminopimelate decarboxylase [Thermoanaerobacter wiegelii Rt8.B1] Length = 445 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 71/400 (17%), Positives = 137/400 (34%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ L N K G +++ A K F + + + G S Sbjct: 29 GTPLYVIDEELLRQNCRAFYNGFKKDYPGNEVIYASKAFMTMAICKIIEEENLGLDVVSG 88 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-- 115 E+ F E ++ K + I A+ +N II + +LN D A+K++ Sbjct: 89 GELYTALKAGFPAEKIYFHGNNKSKEELIMALENNIGRIIVDNWFELNMLNDLAKKMNKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 I +R++P V + S+ G + + E N+ GL H Sbjct: 149 PNIYIRVSPGVEAHTHQYVKTGQIDSKFGFPLFNGDAMRAIEYALTLENVNIVGLHSHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + A ++ + ++ + LGGG + +++ + Sbjct: 209 SQIFDAESYKAEIEIMMNFLKLVKEFLGWEVGELDLGGGFGIAYVEEDDPQPIEQIAQEI 268 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + I +EPG +I+ N T TV I + V + ++ Sbjct: 269 MQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKDIPGVRKYVAVDGGMSDNI 328 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N + G+ C +GD+ ++ GD ++ Sbjct: 329 RTALYGAKYDAIVANKAKNIKSEKVSIAGKLCESGDMLIWDITLPKIEEGDILAVTCTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N + P + + + +Y D N Sbjct: 389 YNYSMASNYNRLPRPAAVLVSNGQADIIVARETYEDLIRN 428 >gi|313905630|ref|ZP_07838992.1| carboxynorspermidine decarboxylase [Eubacterium cellulosolvens 6] gi|313469577|gb|EFR64917.1| carboxynorspermidine decarboxylase [Eubacterium cellulosolvens 6] Length = 432 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 133/428 (31%), Positives = 206/428 (48%), Gaps = 63/428 (14%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y++D++KL NL + + AG K+LLA K F+ + + + +Y+DG T+S L+ Sbjct: 6 ISTPAYVVDEKKLEENLRILKEVGEQAGCKILLAQKAFSMFAEYPLIGRYLDGATASGLF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG EK E H ++ AYK+ E+D + S CD +IFN+VSQ+ K+ + +GLR Sbjct: 66 EARLGAEKMRKENHVFSPAYKEEEMDEIASVCDHVIFNSVSQVRKYAGRPSCAETSLGLR 125 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCENKSFLCF 175 +NP S + + DP FSRLG + + ++GL H CE S Sbjct: 126 VNPECSTQEHGIYDPCASFSRLGVTVEKLEKELAEDDGFWSKISGLHCHTLCEQNS-DAL 184 Query: 176 SAMLKNIEKEFGHFI--TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 ++ +E++FG ++ QI W++LGGG H T DY + + ++ E Y V++YLEP Sbjct: 185 EVTVEALEEKFGKYLQSPQIRWLNLGGGHHITRADYDRERLIRIVRRLRETYQVEVYLEP 244 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT-------- 285 GEAI N L T VLD +N +++D+S H+PD L + Sbjct: 245 GEAIALNAGYLVTEVLDEVDNGLTTLLLDASAACHMPDVLEMPYQPPLQGAEQVPRIENL 304 Query: 286 --------------------------------------------GPYTAMVCGRSC--LA 299 + SC LA Sbjct: 305 ADLRALEKRGMKTVAPDREQEDASCGMNPSRVADSASGDNSNLGEEKAYVYRLSSCTCLA 364 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD+ G++ F+ PV+ GDR+ FED+A Y++ + N FNG+ +P+I DG +++F Y Sbjct: 365 GDVIGDYCFDHPVRPGDRLYFEDMAIYSMVKNNTFNGMALPSIWRMKPDGECVLVKKFGY 424 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 425 EDFKGRLS 432 >gi|269961537|ref|ZP_06175900.1| diaminopimelate decarboxylase [Vibrio harveyi 1DA3] gi|269833766|gb|EEZ87862.1| diaminopimelate decarboxylase [Vibrio harveyi 1DA3] Length = 417 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 108/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWNAFDSAVGEHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGDAKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVVAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V ++ G NV G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPAVYKFAQSLPNLNVQGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + I + +GGG+ P L Sbjct: 207 EIEPFIDATDRLLALIDDLKAQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLEN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C GD G+ ++ GD ++ Y + +N Sbjct: 327 VAPREGEAQTYDLVGPICETGDFLGKDRALV-LQEGDLLAVRSAGAYGFVMSSNYNTRTR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + + + Sbjct: 386 AAEVMVDGNQSHLVRQRE 403 >gi|260753687|ref|YP_003226580.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553050|gb|ACV75996.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 421 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 69/388 (17%), Positives = 132/388 (34%), Gaps = 26/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y+ L AG + A+K + + + + G S Sbjct: 26 GTPCYVYSHSYLTERARRFTKALDGAGKGKALVAFAVKANPSQAILASFAKEGLGADVVS 85 Query: 60 LYEV-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ H E ++ K + A+ +VS++ + A L K Sbjct: 86 AGEIHRAVHAGIPPERIVFSGVGKTAEEMRYALEIGIGQFNIESVSEIEMLAEVATSLGK 145 Query: 117 K--IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167 K + LRINP V + ++ G +D + + K + G+ H Sbjct: 146 KAAVALRINPDVDPHTHAKIATGKADTKFGIAAEDALSAYEKLASYPSLKIQGIASHIGS 205 Query: 168 ENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-----QRLK 219 + F + + I IE LGGG+ KD + + +K Sbjct: 206 QITDLAPFEAAAERIYEIITALEKAGHTIETADLGGGLGVRYKDDQPEPPSIEAYGEMIK 265 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES 278 ++ ++ ++ EPG +++ N L + V+ + E+ ++ D+++ V L Sbjct: 266 RVTKGWNCRLIFEPGRSLIANAGILLSKVIRVKESKTARFVILDAAMNDLVRPTLYDAYH 325 Query: 279 AT--IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + P+ Y A + G C GDIF VK D ++ Y + +N Sbjct: 326 EIKAVTPSVQAYQADIVGPVCETGDIFAGNRSIPAVKPDDLVAIMSAGAYGATMASAYNS 385 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + + + S D Sbjct: 386 RPLVAEVMVSGNKSALIRKRQSVEDLMR 413 >gi|312795814|ref|YP_004028736.1| Diaminopimelate decarboxylase [Burkholderia rhizoxinica HKI 454] gi|312167589|emb|CBW74592.1| Diaminopimelate decarboxylase (EC 4.1.1.20) [Burkholderia rhizoxinica HKI 454] Length = 420 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 56/386 (14%), Positives = 119/386 (30%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + K+ A+K + + + + G S E Sbjct: 27 GTPLYVYSRAALTDAYQAYAGACTGRRAKVHYAVKANSNLAVLNVFARLGAGFDIVSGGE 86 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ A+ + ++++L + A + + Sbjct: 87 LARVLAAGGKPHDVVFSGVGKNAADMRMALEAGVRCFNVESLAELARLNQIAGESGRIAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G D + + G+ H + Sbjct: 147 ISLRVNPDVDAKTHPYISTGLKANKFGVAFDDARAAYRTALGMKHVRIAGIDCHIGSQIT 206 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + + + I+ I +GGG+ D + +K + + Sbjct: 207 EISPYLDAIDKVLELVAQVEADGAPIDHIDVGGGLGIRYDDETPPNIGTFVKTILDHFDR 266 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I+ EPG ++V N L T V + +K+ IVD+++ + A Sbjct: 267 RGHGHREIWFEPGRSLVGNAGILLTRVEYLKPGAVKHFAIVDAAMNDLARPAMYDAYHAI 326 Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 P T + G C +GD ++ GD ++ Y + +N Sbjct: 327 DAVAPRDGRPPVTYDIVGPVCESGDWLARDRSLA-LEPGDLLAIRSTGAYGFVMSSNYNT 385 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDY 362 + + + A R + Sbjct: 386 RPRAAELLVDGEQVHVARRRETLAQL 411 >gi|322379176|ref|ZP_08053569.1| diaminopimelate decarboxylase [Helicobacter suis HS1] gi|322379661|ref|ZP_08053980.1| diaminopimelate decarboxylase [Helicobacter suis HS5] gi|321147923|gb|EFX42504.1| diaminopimelate decarboxylase [Helicobacter suis HS5] gi|321148407|gb|EFX42914.1| diaminopimelate decarboxylase [Helicobacter suis HS1] Length = 641 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 118/386 (30%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D Q L K + ALK + + TL + G SLYE Sbjct: 15 KTPFYLYDLQGLTQVFLDFKEAFKGHKSLICYALKANSNLKILQTLAKEGAGADCVSLYE 74 Query: 63 VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTI-IFNTVSQLNKFKDKAQKLHKKIG 119 V ++ + EI L + ++L + + A + Sbjct: 75 VQRALLAGIPAYKIIFSGAGKLEEEIKEALRLKILFLNVESFAELKRIEQIASEQKTPAR 134 Query: 120 LRI--NPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + + NP++ ++ G + K+ ++ S GL H + Sbjct: 135 ISVRLNPNIDAITHPYISTGLFENKFGVEEKEAVQIFMFAKQSPFLEPVGLHCHIGSQLN 194 Query: 171 SFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR------LKEF 221 + ++ + ++++ +GGG+ + +K+ Sbjct: 195 NLEPLRQACMKLADLARFLMASGIDLKFLDVGGGLGVDYSQEQDQTIIALDDYSEAIKQA 254 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESAT 280 + I EPG I+ L T V I K IVD+ + + L Sbjct: 255 FKGLDCTIICEPGRRIIAPNGVLITRVQYIKHRAHKCFAIVDAGMNDFLRPALYQASHPI 314 Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T + G C + D F + ++ GD I+F Y + + +N Sbjct: 315 KVLKEQTPTQKTYDIVGPVCESADCFAKSMLLPEIQEGDLIAFYQAGAYGSSMASRYNSR 374 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYY 363 +G + D Sbjct: 375 PQILELGITKEGISVLREREDFLDLI 400 >gi|325982948|ref|YP_004295350.1| diaminopimelate decarboxylase [Nitrosomonas sp. AL212] gi|325532467|gb|ADZ27188.1| diaminopimelate decarboxylase [Nitrosomonas sp. AL212] Length = 417 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 60/385 (15%), Positives = 120/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L N + A+K + + + Q G S E Sbjct: 29 GTPCYVYSRSALTKAYQAFDTAFANRDHLICFAVKANSNIAILNLFAQLGSGFDIVSGGE 88 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K + N + ++L A+ + K Sbjct: 89 LQRVIKAGGDPGKTVFSGVGKSRYEMRMALEVNILCFNVESEAELIALNRIAKDMDKLAP 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LRINP V ++ G ++ GL H + Sbjct: 149 VSLRINPDVDAKTHPYISTGLKENKFGIPAREAERIYKSAHLYPNIRFIGLDCHIGSQLT 208 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 F K + +IE + LGGG+ D + D+ L + + Sbjct: 209 ELEPFMQASKKMLHLLDSLQAQNLEIEHLDLGGGLGIRYNDEILPSISDYVSALCINTHQ 268 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++ +EPG ++V N L T + + +N IVD+++ + L + Sbjct: 269 IKQRLLIEPGRSLVGNAGILLTRIEYLKHTPARNFAIVDAAMNDLMRPALYDAYHEILPV 328 Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + G C GD G + G+ ++ Y ++ + +N Sbjct: 329 HKNSGEIKDYQIVGPVCETGDFLGHDRRIGLID-GNLLAIMSAGAYGMSMSSNYNSRPRA 387 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + D T + + + + N Sbjct: 388 AEIMVDKDTTHIIRQRETIDQLFAN 412 >gi|56552664|ref|YP_163503.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis ZM4] gi|13124113|sp|Q9Z661|DCDA_ZYMMO RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|4378171|gb|AAD19416.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis ZM4] gi|56544238|gb|AAV90392.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis ZM4] Length = 421 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 128/388 (32%), Gaps = 26/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y+ L AG + A+K + + + + G S Sbjct: 26 GTPCYVYSHSYLTERARRFTKALDGAGKGKSLVAFAVKANPSQAILASFAKEGLGADVVS 85 Query: 60 LYEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ H E ++ K + A+ +VS++ + A L K Sbjct: 86 AGEIRRAVHAGIPPERIVFSGVGKTAEEMRYALEIGIGQFNIESVSEIEMLAEVATSLGK 145 Query: 117 K--IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167 K + LRINP V + ++ G +D + + K + G+ H Sbjct: 146 KAAVALRINPDVDPHTHAKIATGKADTKFGIAAEDALSAYEKLASYPSLKIQGIASHIGS 205 Query: 168 ENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-----QRLK 219 + F + + I IE LGGG+ KD + + +K Sbjct: 206 QITDLAPFEAAAERIYEIITALEKAGHAIETADLGGGLGVRYKDDQPEPPSVEAYGEMIK 265 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES 278 ++ ++ ++ EPG +++ N L + V+ I E+ ++ D+++ V L Sbjct: 266 RVTKGWNCRLIFEPGRSLIANAGVLLSKVIRIKESKTARFVILDAAMNDLVRPTLYDAYH 325 Query: 279 ATIYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 T + G C GDIF VK D ++ Y + +N Sbjct: 326 EIKAVTPSAQTYQADIVGPVCETGDIFARNRSISAVKADDLMAIMSAGAYGATMASAYNS 385 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + + + S D Sbjct: 386 RPLVAEVMVSGNKSALIRKRQSVEDLMR 413 >gi|261379373|ref|ZP_05983946.1| diaminopimelate decarboxylase [Neisseria subflava NJ9703] gi|284797820|gb|EFC53167.1| diaminopimelate decarboxylase [Neisseria subflava NJ9703] Length = 406 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L + + A+K + G S E Sbjct: 18 GTPLYVYSKSALTEAFENYQTAFSALNPLVCYAVKANGNLNIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G +T V + EI+ A+ + ++ ++++ + A +L K Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKVAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHVSLQSHLKIVGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I + +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLIEACERILALVDQLADEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLVLEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGSSMASNYNTRNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + G + + N Sbjct: 377 AEVLVDGSGYKLIRQRETVEQQMAN 401 >gi|311068934|ref|YP_003973857.1| diaminopimelate decarboxylase [Bacillus atrophaeus 1942] gi|310869451|gb|ADP32926.1| diaminopimelate decarboxylase [Bacillus atrophaeus 1942] Length = 439 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 131/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + AG ++ A K F++ M + S Sbjct: 30 GTPLYVYDVALIRERAKSFQQAFTAAGLRAQVAYASKAFSSVAMIQLAQEEGLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F E ++ ++ A+ + I+ + +++ ++ ++ Sbjct: 90 GELYTAISAGFPAERIHFHGNNKSREELQMALEYHIGCIVVDNFYEISLIEELCKESGYT 149 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G + + S + G+ H Sbjct: 150 VDVLLRITPGVEAHTHDYITTGQEDSKFGFDLNNGQTERAIEQILPSNHIRLLGVHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC------- 215 + F + I + + + ++LGGG + Sbjct: 210 SQIFDTAGFVLAAEKIFTKLDEWRESYSFISKVLNLGGGFGIRYTEEDEPLPATVYVEKI 269 Query: 216 -QRLKEFSEKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + +K +E+YS +I++EPG ++V + T TV E + VD + ++ Sbjct: 270 IEAVKANAERYSFSIPEIWIEPGRSLVGDAGTTLYTVGAQKEVPGTRRYAAVDGGMSDNI 329 Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I T + G+ C +GD+ VK GD ++ Sbjct: 330 RPALYQAKYEAISANRIEEEHNTTVSIAGKCCESGDMLIWDIDLPEVKAGDLLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + I+ +Y D Sbjct: 390 YGYSMANNYNRIPRPAVVFVEDGEAHLVIKRETYEDIVK 428 >gi|292493805|ref|YP_003529244.1| diaminopimelate decarboxylase [Nitrosococcus halophilus Nc4] gi|291582400|gb|ADE16857.1| diaminopimelate decarboxylase [Nitrosococcus halophilus Nc4] Length = 416 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 127/385 (32%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + ++ +L A+K + + + L + G S+ E Sbjct: 26 GTPCYVYSRAMIEHQWRAFDQAFQDYPHRLCYAVKANSNLAVLNILARLGSGFDIVSVGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K D A+ + + ++L D A KL Sbjct: 86 LERVLAAGGDPGQVVFSGVGKRADEMHRALTAGIACFNVESEAELAHLNDIAGKLGRQAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170 + LR+NP V ++ G + +E V G+ H + Sbjct: 146 VSLRVNPDVDARTHPYIATGLRENKFGIEIDQALEVYAHAVTLPYIDILGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 S F A + + + ++ I LGGG+ T +D + + L+E Sbjct: 206 SLSPFLAASERVLALVDQLAERGIEVRHIDLGGGLGITYRDEAPPSPQQYATALREKLVG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT--- 280 ++++++EPG AIV N L T V + IVD+++ + L Sbjct: 266 RNLEVWIEPGRAIVGNGGVLLTRVEYLKHTPHKDFAIVDAAMNDLLRPALYDAWQEIIPV 325 Query: 281 -IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I + + V G C GD G+ + +G+ + Y + +N Sbjct: 326 TISTDGKSHLFDVVGPVCETGDFLGKQRHLA-IGVGELLVARAAGAYGFTMSSNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + + Y Sbjct: 385 AAEVMVDGSKAYLVRERETVESLYA 409 >gi|167036981|ref|YP_001664559.1| diaminopimelate decarboxylase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039692|ref|YP_001662677.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X514] gi|256750624|ref|ZP_05491510.1| diaminopimelate decarboxylase [Thermoanaerobacter ethanolicus CCSD1] gi|300915059|ref|ZP_07132374.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X561] gi|307724982|ref|YP_003904733.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X513] gi|320115399|ref|YP_004185558.1| diaminopimelate decarboxylase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166853932|gb|ABY92341.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X514] gi|166855815|gb|ABY94223.1| diaminopimelate decarboxylase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256750464|gb|EEU63482.1| diaminopimelate decarboxylase [Thermoanaerobacter ethanolicus CCSD1] gi|300888783|gb|EFK83930.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X561] gi|307582043|gb|ADN55442.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X513] gi|319928490|gb|ADV79175.1| diaminopimelate decarboxylase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 445 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 71/400 (17%), Positives = 137/400 (34%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ L N K G +++ A K F + + + G S Sbjct: 29 GTPLYVIDEELLRQNCRAFYNGFKKDYPGNEVIYASKAFMTMAICKIIEEENLGLDVVSG 88 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-- 115 E+ F E ++ K + I A+ +N II + +LN D A+K++ Sbjct: 89 GELYTALKAGFPAEKIYFHGNNKSKEELIMALENNIGRIIVDNWYELNMLNDLAKKMNKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 I +R++P V + S+ G + + E N+ GL H Sbjct: 149 PNIYIRVSPGVEAHTHQYVKTGQMDSKFGFPLFNGDAMRAIEYALTLENVNLVGLHSHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + A ++ + ++ + LGGG + +++ + Sbjct: 209 SQIFDAESYKAEIEIMMNFLKLVKEFLGWEVGELDLGGGFGIAYVEEDDPQPIEQIAQEI 268 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + I +EPG +I+ N T TV I + V + ++ Sbjct: 269 MQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKDIPGVRKYVAVDGGMSDNI 328 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N + G+ C +GD+ ++ GD ++ Sbjct: 329 RTALYGAKYDAIVANKAKNIKSEKVSIAGKLCESGDMLIWDITLPKIEEGDILAVTCTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N + P + + + +Y D N Sbjct: 389 YNYSMASNYNRLPRPAAVLVSNGQADIIVARETYEDLIRN 428 >gi|225850923|ref|YP_002731157.1| diaminopimelate decarboxylase [Persephonella marina EX-H1] gi|225645958|gb|ACO04144.1| diaminopimelate decarboxylase [Persephonella marina EX-H1] Length = 426 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 121/387 (31%), Gaps = 23/387 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+YL KQ +L+ +D + + A K + + + G S Sbjct: 30 VGTPFYLYSKQAILDRIDQYKKAFEEYNTLICYAAKANSNLSILKIFEENDLGLDIVSGG 89 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ F Y K N + + +++ + A+KL+K + Sbjct: 90 ELYKAKKAGFPSNKIVYAGVGKTDFELEYAIRENILSFNVESEMEIDVLDELAEKLNKTV 149 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCEN 169 + R+NP V S+ G + + K V G+ H + Sbjct: 150 RISIRVNPDVDPKTHPYISTGLRKSKFGIDIDEALNVYRKAVKKKNIDVIGIHCHIGSQI 209 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFS 222 + ++ +++ +GGGI + + + Sbjct: 210 MEISPYVEAVEKTAELVFRLKKEGIELQHFDIGGGIGIRYRPEDNPPTPEDLAKAVIPIV 269 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATI 281 +++ +EPG +++ L T V+ + K+ +IVDS + + + + Sbjct: 270 RTTGLRLIIEPGRSLIGEAGALITQVVFLKNKGDKHFIIVDSGMNDLLRPAMYNAYHHIL 329 Query: 282 YPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G C GD F V+ D ++ Y + + +N Sbjct: 330 SVEKKERKVVADIVGPICETGDFFALDREIDDVQRKDYLAVMSAGAYGSSMSSNYNVRPR 389 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNL 366 + + + Y+ Y L Sbjct: 390 AAEVLVSDNSFYLIKEREDYS-YITKL 415 >gi|146343265|ref|YP_001208313.1| diaminopimelate decarboxylase [Bradyrhizobium sp. ORS278] gi|146196071|emb|CAL80098.1| diaminopimelate decarboxylase [Bradyrhizobium sp. ORS278] Length = 446 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 104/390 (26%), Gaps = 28/390 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + V + A+K + + TL + G S Sbjct: 50 VGTPFYCYSTATLERHYRVFADAFAGQDVLICYAMKANSNQSVLRTLAKLGAGADVVSGG 109 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ K D + + +L+ A + Sbjct: 110 ELKRALAAGIPSRKIVFSGVGKTEAELRAALAADIHCLNIESEPELDLLARLAVETGHTA 169 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169 +R+NP V + ++ G + V G+ H + Sbjct: 170 RISIRVNPDVDAGTHAKISTGKSENKFGIPLDHARRVYARAAKMKGIKVTGVDVHIGSQI 229 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 + + I + GGG+ + +K Sbjct: 230 TDLGPMETAFRILTEFVQTLRADGHDISHVDFGGGLGIPYHMDRAVPPEPAAYAAMVKRV 289 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 S + EPG IV N L V+ + KN VI+D+++ + LY+ Sbjct: 290 SHNLGCTLMFEPGRMIVGNAGILLAKVIYVKHGEAKNFVIIDAAMNDLIRPT-LYEAHHD 348 Query: 281 IYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I P A V G C +GD GD ++ Y + + Sbjct: 349 ILPVKQAPPDAPAFVADVVGPVCESGDYLALDRALPEPAPGDLLAIMTAGAYGAVQACTY 408 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D Sbjct: 409 NTRALVPEVLVKGDQAAVIRPRIEVEQLIA 438 >gi|126734685|ref|ZP_01750431.1| diaminopimelate decarboxylase [Roseobacter sp. CCS2] gi|126715240|gb|EBA12105.1| diaminopimelate decarboxylase [Roseobacter sp. CCS2] Length = 422 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 115/390 (29%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + A+K + + L G S Sbjct: 25 VGTPFYVYSTATLKRHFTLFDEALDWGDHLVCFAMKSLSNQAVIKLLGNAGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E + G+ ++ K D A+ + ++ AQ L Sbjct: 85 EYLRAKAAGVPGDRIVFSGVGKTADEMRLAIEGGIRQFNVESEPEMIVLDRVAQSLDAVV 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I +R+NP V + ++ G E V G+ H + Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPISRAREVYAMAGAMPGLKVVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F A + + + +I+ + LGGG+ D+ ++ Sbjct: 205 TELAPFEAAYNKVAELTEQLRADGHEIKRLDLGGGLGIPYARSNEAPPLPTDYGALIQRT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 +I +EPG I N + + V+ + ++ D ++ + + Sbjct: 265 VGHLGCEIEIEPGRLISGNAGLMVSKVIYVKSGEDREFLILDGAMNDLIRPAMYEAWHDI 324 Query: 281 IYPNTG-----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P + G C +GD F + VK D ++F Y + +N Sbjct: 325 VPVVEPAPGAVPAKYDIVGPVCESGDTFAKGREMPAVKADDLVAFRSAGAYGAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 M + + D +Y + Sbjct: 385 SRPMIPEVLVDGDQFAVIRPRPTYEEMIAR 414 >gi|326389774|ref|ZP_08211339.1| diaminopimelate decarboxylase [Thermoanaerobacter ethanolicus JW 200] gi|325994256|gb|EGD52683.1| diaminopimelate decarboxylase [Thermoanaerobacter ethanolicus JW 200] Length = 445 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 71/400 (17%), Positives = 137/400 (34%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ L N K G +++ A K F + + + G S Sbjct: 29 GTPLYVIDEELLRQNCRVFYNGFKKDYPGNEVIYASKAFMTMAICKIIEEENLGLDVVSG 88 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-- 115 E+ F E ++ K + I A+ +N II + +LN D A+K++ Sbjct: 89 GELYTALKAGFPAEKIYFHGNNKSKEELIMALENNIGRIIVDNWFELNMLNDLAKKMNKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 I +R++P V + S+ G + + E N+ GL H Sbjct: 149 PNIYIRVSPGVEAHTHQYVKTGQIDSKFGFPLFNGDAMRAIEYALTLENVNIVGLHSHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + A ++ + ++ + LGGG + +++ + Sbjct: 209 SQIFDAESYKAEIEIMMNFLKLVKEFLGWEVGELDLGGGFGIAYVEEDDPQPIEQIAQEI 268 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + I +EPG +I+ N T TV I + V + ++ Sbjct: 269 MQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKDIPGVRKYVAVDGGMSDNI 328 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N + G+ C +GD+ ++ GD ++ Sbjct: 329 RTALYGAKYDAIVANKAKNIKSEKVSIAGKLCESGDMLIWDITLPKIEEGDILAVLCTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N + P + + + +Y D N Sbjct: 389 YNYSMASNYNRLPRPAAVLVSNGQADIIVARETYEDLIRN 428 >gi|261253091|ref|ZP_05945664.1| carboxynorspermidine decarboxylase putative [Vibrio orientalis CIP 102891] gi|260936482|gb|EEX92471.1| carboxynorspermidine decarboxylase putative [Vibrio orientalis CIP 102891] Length = 377 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 171/368 (46%), Positives = 245/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMINEDKLIENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LGHE FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + IGLR Sbjct: 66 EVKLGHETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + ++++G+MFH NCENK F +L + Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQANHIKPEVFEDIDGVMFHMNCENKDVDAFIGLLDS 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FG ++ +++WIS+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISEQFGQYLDKLDWISMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN K IVDS+ EAH D L+Y E A+I + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENGKKTAIVDSATEAHRLDTLIYDEPASILEASDNGEHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F E FE+P++IG R+ D AGY + + NWFNG+ MP++ + G I+ + EF Y Sbjct: 305 GDQFCEASFEQPLEIGQRLHIMDSAGYTMVKLNWFNGLRMPSVYCERSSGEIQKLNEFDY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 SDFKRSLS 372 >gi|148270405|ref|YP_001244865.1| diaminopimelate decarboxylase [Thermotoga petrophila RKU-1] gi|281412712|ref|YP_003346791.1| diaminopimelate decarboxylase [Thermotoga naphthophila RKU-10] gi|147735949|gb|ABQ47289.1| diaminopimelate decarboxylase [Thermotoga petrophila RKU-1] gi|281373815|gb|ADA67377.1| diaminopimelate decarboxylase [Thermotoga naphthophila RKU-10] Length = 386 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 61/375 (16%), Positives = 116/375 (30%), Gaps = 17/375 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ L + + + A+K + L + G + E Sbjct: 12 GTPAYVYFEETLRKRARLVKEVFEGVNLLPTFAVKANNNPVLLRILREEGFGMDVVTKGE 71 Query: 63 VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + +N K D + I ++ ++ + + Sbjct: 72 LFAAKLAGVPSHSVVWNGNGKSVDQMKHFLREGVRIINVDSFEEME-IWKELNPEGVEYF 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLCF 175 +R+NP V + G +D NV GL H + F Sbjct: 131 IRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDLFMERFGSMNVKGLHVHIGSQITQVEPF 190 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYSVQIYLEP 233 + + F E I++GGG + + +++ +++ ++ +E Sbjct: 191 VEAFDKVVRASERFG--FEEINIGGGWGINYSGEELDLSSYREKVVPALKRFK-RVIVEI 247 Query: 234 GEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNT--GPYTA 290 G IV + L V+ + + K V+VD + + L A Sbjct: 248 GRYIVAPSGYLLLRVVLVKKRSNKTFVVVDGGMNTLIRPALYSAYHRVFVLGKQGKEVRA 307 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350 V G C +GD+ V+ GD I E+ Y N +N P + G Sbjct: 308 DVVGPLCESGDVIAYDRELPEVEPGDIIVVENAGAYGYTMSNNYNSTVRPAEVLVGEGGE 367 Query: 351 I-KAIREFSYNDYYN 364 I R + D + Sbjct: 368 ISLIRRRETEMDIFK 382 >gi|118475343|ref|YP_891475.1| diaminopimelate decarboxylase [Campylobacter fetus subsp. fetus 82-40] gi|118414569|gb|ABK82989.1| diaminopimelate decarboxylase [Campylobacter fetus subsp. fetus 82-40] Length = 403 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 66/388 (17%), Positives = 118/388 (30%), Gaps = 25/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y D + N + + ALK + + + G S+ E Sbjct: 11 GTPLYAYDFDYIQNQYNKLKKEFNARKSLICYALKANSNLSLLKHIADLGAGFDCVSIGE 70 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119 V Y+ K E N D + + ++ + + A+KL+KK Sbjct: 71 VKKAILAGAQNYKIIYSGVGKSDEEIEEALNLDILMLNLESEEEMKRVESIAKKLNKKAR 130 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + R+NP+V ++ G + + + G+ FH + Sbjct: 131 ISVRVNPNVDPKTHPYISTGLSKNKFGVGIEKARKMYLYAHKSEFLDPVGIHFHIGSQLT 190 Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I++ +GGGI ++ + + Q + + Sbjct: 191 DLKPVIEAANIVSDLLRELKALDIDIKFFDVGGGIGIRYENEKDPDLYGYAQGILAALKG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN------LVIVDSSVEAHVPDYLLYQES 278 + I EPG +V N T VL N + +IVD ++ + L Sbjct: 251 EDITIICEPGRFLVGNAGVFITKVLYEKINDTHSDDKKRFIIVDGAMNDLLRPSLYEAHH 310 Query: 279 ATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 I N+G V G C +GD G+ GD + + Y + +N Sbjct: 311 EIIALNSGKKELCDVVGPICESGDFLGKNVNLPKQSSGDILVVKSAGAYGFCMSSNYNSR 370 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + S+ D N Sbjct: 371 LRTAEVAVCGGKDRLIRQRESFEDLVKN 398 >gi|114798216|ref|YP_759314.1| putative carboxynorspermidine decarboxylase [Hyphomonas neptunium ATCC 15444] gi|114738390|gb|ABI76515.1| putative carboxynorspermidine decarboxylase [Hyphomonas neptunium ATCC 15444] Length = 376 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 115/371 (30%), Positives = 193/371 (52%), Gaps = 7/371 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP +++D +L NL+TA +R AG K+LLA K FA F + Y+DGTT+S Sbjct: 5 IQTPCFVLDIARLRKNLETAQRVRAEAGCKVLLATKAFAMPAAFPLMRDYLDGTTASGEQ 64 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E ++G E+FG E H Y+ AY + E+ + I FN+ QL +F D A+ +GLR Sbjct: 65 EAIMGAEEFGKEVHVYSPAYTEDEVRRLTKVAQHIYFNSAEQLGRFGDIARDAGCHVGLR 124 Query: 122 INPSVSYSKF--ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +NP S + L +P P SR GE ++ V+ H CE+ ++ Sbjct: 125 VNPGYSNATLGGDLYNPTAPTSRFGEVPSKLVQVNWSGVDIFHVHALCES-MAEGSVGLI 183 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + + + F ++ Q++ ++ GGG Y V + +F ++ +++ LEPG +V Sbjct: 184 EYVSEHFAPYLEQVKAVNFGGGHFLNKPGYDVDALVGAINKFKARFGIEVVLEPGAGLVV 243 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGR 295 NT L++TVL + N +L I+D+S H+PD L + P +T G+ Sbjct: 244 NTGELHSTVLALHWNEMDLAILDASASTHMPDVLEVPYRPDVIGAGQPGELAHTYRFGGK 303 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 +C+ GD+ G++ F+KP++ GD I F D Y+ + N FNG + + ++ DG ++ + Sbjct: 304 TCMTGDVIGDYSFDKPLEPGDAIIFTDQMHYSFVKTNTFNGTPLANLVIRWEDGRVEQVS 363 Query: 356 EFSYNDYYNNL 366 +F Y ++ L Sbjct: 364 DFGYGEFRRRL 374 >gi|1304007|dbj|BAA12662.1| LysA [Bacillus subtilis] Length = 441 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 129/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + +AG ++ A K F++ M + S Sbjct: 32 GTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F E ++ ++ A+ I+ + ++ +D ++ Sbjct: 92 GELYTAVAAGFPAERIHFHGNNKSREELRMALEHRIGCIVVDNFYEIALLEDLCKETGHS 151 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G + ++SE + G+ H Sbjct: 152 IDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHCHIG 211 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC------- 215 + F + I K+ + + ++LGGG + Sbjct: 212 SQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIRYTEDDEPLHATEYVEKI 271 Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +KE + +Y I ++EPG ++V + T TV E V + ++ Sbjct: 272 IEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEVPGVRQYVAVDGGMNDNI 331 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A T + G+ C +GD+ VK GD ++ Sbjct: 332 RPALYQAKYEAAAANRIGEAHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 391 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + ++ +Y D Sbjct: 392 YGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVK 430 >gi|261885449|ref|ZP_06009488.1| diaminopimelate decarboxylase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 403 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 66/388 (17%), Positives = 118/388 (30%), Gaps = 25/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y D + N + + ALK + + + G S+ E Sbjct: 11 GTPLYAYDFDYIQNQYNKLKKEFNARKSLICYALKANSNLSLLKHIADLGAGFDCVSIGE 70 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119 V Y+ K E N D + + ++ + + A+KL+KK Sbjct: 71 VKKAILAGAQNYKIIYSGVGKSDEEIEEALNLDILMLNLESEEEMKRVESIAKKLNKKAR 130 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + R+NP+V ++ G + + + G+ FH + Sbjct: 131 ISVRVNPNVDPKTHPYISTGLSKNKFGVGIEKARKMYLYAHKSEFLDPVGIHFHIGSQLT 190 Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I++ +GGGI ++ + + Q + + Sbjct: 191 DLKPVIEAANIVSDLLRELKALDIDIKFFDVGGGIGIRYENEKDPDLYGYAQGILVALKG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN------LVIVDSSVEAHVPDYLLYQES 278 + I EPG +V N T VL N + +IVD ++ + L Sbjct: 251 EDITIICEPGRFLVGNAGVFITKVLYEKINDTHSDDKKRFIIVDGAMNDLLRPSLYEAHH 310 Query: 279 ATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 I N+G V G C +GD G+ GD + + Y + +N Sbjct: 311 EIIALNSGEKELCDVVGPICESGDFLGKNVNLPKQSSGDILVVKSAGAYGFCMSSNYNSR 370 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + S+ D N Sbjct: 371 LRTAEVAVCGGKDRLIRQRESFEDLVKN 398 >gi|163759920|ref|ZP_02167004.1| probable diaminopimelate dap decarboxylase protein [Hoeflea phototrophica DFL-43] gi|162282878|gb|EDQ33165.1| probable diaminopimelate dap decarboxylase protein [Hoeflea phototrophica DFL-43] Length = 422 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 113/389 (29%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLTRHYQVFAGAFSDIDSMVCYAMKANSNQAVLKTLAKLGSGVDVVSEG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKD--KAQKLHK 116 E+ ++ K D + +L A Sbjct: 85 ELRRALAAGIPASRIMFSGVGKTIREMDAALAADIYCFNIESEPELEVLNARALAIGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I RINP V + + G + + V G+ H + Sbjct: 145 PISFRINPDVDAKTHAKISTGKKEDKFGISWQRARDVYRHAATLPGVKVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F LK + + I+ +GGG+ +D + + +K Sbjct: 205 TELQPFDDALKLMIELIGVLRSDGHIIDHFDIGGGLGVPYRDDNTPPPDPDAYGKMVKAR 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESAT 280 ++ LEPG IV N L T V+ + + K VIVD+++ + L Sbjct: 265 LGDLGCKVILEPGRLIVANAGVLVTEVVYVKDGGDKTFVIVDAAMNDLIRPTLYDAWHEV 324 Query: 281 IYPN-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 A + G C +GD + VK GD ++ Y + +N Sbjct: 325 RAVRLSAASAPRIRADIVGPVCESGDYLAKDREMAAVKAGDLLAVGSAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + SY + Sbjct: 385 TRPLIPEVLVKDDAFHVVRKRPSYEELIA 413 >gi|222149957|ref|YP_002550914.1| diaminopimelate decarboxylase [Agrobacterium vitis S4] gi|221736939|gb|ACM37902.1| diaminopimelate decarboxylase [Agrobacterium vitis S4] Length = 423 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 66/389 (16%), Positives = 113/389 (29%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL Q G S Sbjct: 25 VGTPFYCYSTATLERHYRVFSEAFDGVDSMVCYAVKANSNQAVLKTLGQLGAGVDVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ K + + +L+ +A K Sbjct: 85 ELRRALAAGIPPSRILFSGVGKTPSEMDLGLEVGIYCFNVESEPELDVLNQRALKAGKTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + RINP V R ++ G + + V G+ H + Sbjct: 145 HVSFRINPDVDAGTHAKISTGRKENKFGISYERARAVYARAASLEGIKVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221 F+ K + I+ + +GGG+ KD + +K+ Sbjct: 205 TDLQPFAEAFKLLRDLVTTLRAEGHTIDHVDVGGGLGIPYKDDNNPPPDPAAYAAIVKQQ 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I EPG IV N L T V+ + + K VIVD+++ + L Sbjct: 265 LASLDCRIVAEPGRLIVGNAGILVTEVIYVKDGGNKTFVIVDAAMNDLIRPTLYDAHHEL 324 Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + A V G C GD + GD I+ Y + + +N Sbjct: 325 RPVLLSAASAPRIRADVVGPVCETGDYLALDREMSMPRPGDLIAIGSAGAYGAVQSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D SY D Sbjct: 385 TRRLVPEVLVKGDQFHVIRPRPSYEDMIR 413 >gi|163748703|ref|ZP_02155956.1| diaminopimelate decarboxylase [Shewanella benthica KT99] gi|161331813|gb|EDQ02617.1| diaminopimelate decarboxylase [Shewanella benthica KT99] Length = 414 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 56/377 (14%), Positives = 110/377 (29%), Gaps = 23/377 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFDRAVADHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHKK 117 ++ E ++ K + N D + ++L + A Sbjct: 86 LLRVIEAGGEPAKVVFSGVGKTAAEMEMALNLDILCFNVESAAELEQLNIVAGRIGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LRINP V ++ G + + + G+ H + Sbjct: 146 VSLRINPDVDAGTHPYISTGLKDNKFGIAMEQAEAIFARAAALPNLEIKGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + + IE +GGG+ + D + L E Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGIHIEHFDVGGGLGVSYGDETPPQPDVYAAALLERLGS 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + + K+ +VD ++ + L Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKSNDDKHFALVDGAMNDLIRPALYSAWQNIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + G C GD G+ + GD ++ Y + +N Sbjct: 326 KPRDGKTLNYDIVGPICETGDFLGKDREL-NLAAGDYLAVCSSGAYGFTMSSNYNSRPRS 384 Query: 341 TIAVKNVDGTIKAIREF 357 + + + Sbjct: 385 AEVMVDGEQAFVIRERE 401 >gi|88604175|ref|YP_504353.1| diaminopimelate decarboxylase [Methanospirillum hungatei JF-1] gi|88189637|gb|ABD42634.1| diaminopimelate decarboxylase [Methanospirillum hungatei JF-1] Length = 430 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 63/395 (15%), Positives = 131/395 (33%), Gaps = 31/395 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ ++ +N + +++L A K + L Q G S Sbjct: 29 GTPLYVTDETRIRDNYRGYVSALSDHYPHIRVLYAAKANGNLNIIKILAQEGAGADVFSS 88 Query: 61 YEVMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E+ + E +N + + + + + +++ +L + A + K Sbjct: 89 GELHMALLAGMKPEHLLFNGSSKTEADHRLAVEKGVRVSLDSLDELAQLDRIAGEAGKVV 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169 ++ R+NP++ S+ G + ++ + G+ H + Sbjct: 149 EVSFRVNPAIDVPTHPKIATGLATSKFGIPAAEITDAYAAALACKNVVPVGIHCHIGSQI 208 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 F+ + + + + +++ LGGG+ + + + Sbjct: 209 LDVEPFAKEAQVMMEVVEELHRMGVRFKFVDLGGGLGVAYDHFGPDAPTFASYANAVMPV 268 Query: 222 SEK------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275 +I++EPG ++V ++T L T V + + K V VD+ + + Sbjct: 269 CTSVLRRLGIQPEIWIEPGRSMVCDSTVLLTKVNSVKKAHKTFVNVDAGFNLLIRPAMYD 328 Query: 276 QESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + N T V G C GDI V GD I+ D Y + Sbjct: 329 SYHEVLVANRADEEPAGTYTVTGPICETGDILAHDRKLPGVVAGDLIAVLDAGAYGYSMA 388 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + +NG + R + +D NL Sbjct: 389 SQYNGRGRCAEVLVRKGQAELMRRAETIDDLMANL 423 >gi|145638478|ref|ZP_01794088.1| diaminopimelate decarboxylase [Haemophilus influenzae PittII] gi|145272807|gb|EDK12714.1| diaminopimelate decarboxylase [Haemophilus influenzae PittII] gi|309751609|gb|ADO81593.1| Diaminopimelate decarboxylase [Haemophilus influenzae R2866] gi|309973776|gb|ADO96977.1| Diaminopimelate decarboxylase [Haemophilus influenzae R2846] Length = 415 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ Sbjct: 206 ELQPFLDAADRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L I Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLAREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D + R + + Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408 >gi|294142609|ref|YP_003558587.1| diaminopimelate decarboxylase [Shewanella violacea DSS12] gi|293329078|dbj|BAJ03809.1| diaminopimelate decarboxylase [Shewanella violacea DSS12] Length = 414 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 109/377 (28%), Gaps = 23/377 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFDRAVADHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K + N + ++L + A ++ K Sbjct: 86 LQRVIQAGGDPAKVVFSGVGKTAAEMEMALNLGIHCFNVESAAELEQLNIVAGRIGKLAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LRINP V ++ G + + V G+ H + Sbjct: 146 VSLRINPDVDAGTHPYISTGLKDNKFGIAMEQAEAIFARAAALPNLKVKGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + + IE +GGG+ D + L E Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGIHIEHFDVGGGLGVPYDDETPPQPAVYAAALIERLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ EPG AI N T VL + K+ +VD ++ + L I Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKGNGDKHFALVDGAMNDLIRPALYSAWQNIIPV 325 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 N + G C GD G+ + GD ++ Y + +N Sbjct: 326 NPRDGETLNYDIVGPVCETGDFLGKDREL-NLAAGDFLAVRSSGAYGFTMSSNYNSRPRA 384 Query: 341 TIAVKNVDGTIKAIREF 357 + + + Sbjct: 385 AELMVDGEQAYVIRERE 401 >gi|149908508|ref|ZP_01897170.1| diaminopimelate decarboxylase [Moritella sp. PE36] gi|149808342|gb|EDM68279.1| diaminopimelate decarboxylase [Moritella sp. PE36] Length = 418 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 60/383 (15%), Positives = 113/383 (29%), Gaps = 24/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A+K + + + L + G S E Sbjct: 27 GTPTYVYSRATIERHWHAFNDAAGAHPHLVCYAVKANSNIAVLNVLARLGSGFDIVSGGE 86 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 ++ ++ K A+ N + +L + D A + + Sbjct: 87 LLRVIAAGGDPSKIVFSGVGKTVAEINLALDHNIHCFNVESTPELERINDIALSRGVQAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENK 170 I +R+NP++ ++ G + G+ H + Sbjct: 147 ISIRVNPNIDAGTHPYISTGLKENKFGIDIDLAEGVYQVASKMPGIKLKGVDCHIGSQLT 206 Query: 171 SFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224 F L + + +E + +GGG+ + LK Sbjct: 207 ELSPFLDAVDKLLLLIDKLSAQGIVLEHLDVGGGLGVPYNGETPPQPAEYAQALKAKLAG 266 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + EPG AI+ N L + V I KN IVD+++ + L A Sbjct: 267 RKLALIFEPGRAIMANAGILVSKVEYIKLTEHKNFAIVDAAMNDLIRPALYSAWQAIAPV 326 Query: 284 NTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 N V G C GD G+ + + D I Y + +N + Sbjct: 327 NKSLERECLNYDVVGPICETGDFLGKNRDL-TIAMDDYIVVRSAGAYGSTMSSNYNSRSR 385 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 P + + D R + Sbjct: 386 PAEVMVDGDVAHLVRRREGLAEI 408 >gi|269104270|ref|ZP_06156966.1| carboxynorspermidine decarboxylase putative [Photobacterium damselae subsp. damselae CIP 102761] gi|268160910|gb|EEZ39407.1| carboxynorspermidine decarboxylase putative [Photobacterium damselae subsp. damselae CIP 102761] Length = 374 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 165/368 (44%), Positives = 232/368 (63%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TPY++ID+ LL NL+ ++ +G K++LALKCF+ WG+FDT+ Y+DGTTSS Sbjct: 4 LATPYFMIDEAALLKNLERIAQLKALSGAKMVLALKCFSTWGVFDTMKPYLDGTTSSGPL 63 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG E FGGETH Y+V Y +I+A+ + +IFN++SQL + A IG+R Sbjct: 64 EVRLGAETFGGETHGYSVGYSQQDIEAINPFVNKLIFNSLSQLENLRKYAAD-GISIGVR 122 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 NP +SY+ LA+P R +SRLG + V G MFH NCEN +F + +L+ Sbjct: 123 FNPGISYANQDLANPARQYSRLGVSVDKLSSQALVGVEGGMFHMNCENSNFPAYKRILET 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FG ++ + W+SLGGG+ FT YP+++ LK FS+K+ VQIYLEPGEA++T T Sbjct: 183 ISQQFGPYLDNLNWVSLGGGVSFTSDGYPLEELASLLKWFSDKHGVQIYLEPGEAVITKT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN--TGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y ES TI G Y ++ SCLA Sbjct: 243 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYNESGTIREASLDGDYEYIIGSCSCLA 302 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD+F F++P++IGDR+ D GY + + NWFNG+ MP+I + VDG I + +F Y Sbjct: 303 GDVFCVAKFDQPLQIGDRLHVMDSGGYTMVKLNWFNGLKMPSIYCRRVDGEIIQLNQFGY 362 Query: 360 NDYYNNLS 367 +D+ LS Sbjct: 363 DDFKATLS 370 >gi|304309745|ref|YP_003809343.1| Diaminopimelate decarboxylase (DAP decarboxylase) [gamma proteobacterium HdN1] gi|301795478|emb|CBL43676.1| Diaminopimelate decarboxylase (DAP decarboxylase) [gamma proteobacterium HdN1] Length = 422 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 115/388 (29%), Gaps = 30/388 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + + + A+K + + + L + G S Sbjct: 26 VGTPAYVYSRSAIEQQWLAFDRAFGAHPHLVCFAVKANSNIAVLNLLARLGAGFDIVSEG 85 Query: 62 EVMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ + ++ A+ + S+L+ A L Sbjct: 86 ELERVLRAGGDPKKVVFSGVGKQPAEMARALTVGVRCFNVESESELHTLNQVAATLGVKA 145 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169 + LR+NP V ++ G ++ N+ G+ H + Sbjct: 146 PVSLRVNPDVDAQTHPYISTGLKENKFGIDIDRALQVYRDASELPHINIVGVDCHIGSQL 205 Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 F L + + + LGGG+ ++ ++ + Sbjct: 206 TQLAPFLDALDRVLVLVDALKAEGIALRHLDLGGGLGVCYRNEQPPSPSDYVQALLTRLG 265 Query: 227 VQI---------YLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQ 276 LEPG AIV N L T ++ + E + I+D ++ + L Sbjct: 266 QHPEFGKQGIEIILEPGRAIVANAGVLLTRIMGLKETPARKFAIIDGAMNDLIRPALYGA 325 Query: 277 ESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + T + G C GD G+ + ++ GD ++ + Y + Sbjct: 326 WQEIVAVKERQDSPEATYDIVGPVCETGDFLGKERALR-IQQGDLLAVKSAGAYGFVMSS 384 Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYN 360 +N N + + + SY+ Sbjct: 385 NYNTRNRAAEVIVDKEQFHIVRARESYD 412 >gi|15644265|ref|NP_229317.1| diaminopimelate decarboxylase [Thermotoga maritima MSB8] gi|8134399|sp|Q9X1K5|DCDA_THEMA RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|4982083|gb|AAD36584.1|AE001799_16 diaminopimelate decarboxylase [Thermotoga maritima MSB8] Length = 386 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 62/373 (16%), Positives = 116/373 (31%), Gaps = 13/373 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ L + + + A+K + L + G + E Sbjct: 12 GTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLKILREEGFGMDVVTKGE 71 Query: 63 VMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ T +N +++ L I+ + + + + + Sbjct: 72 LLAAKLAGVPSHTVVWNGNGKSRDQMEHFLREDVRIVNVDSFEEMEIWRELNPEGVEYFI 131 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLCFS 176 R+NP V + G +D N+ GL H + F Sbjct: 132 RVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFMERFRSMNIRGLHVHIGSQITRVEPFV 191 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGE 235 + + + E I++GGG + R K + K ++ +E G Sbjct: 192 EAFSKVVRASERYG--FEEINIGGGWGINYSGEELDLSSYREKVVPDLKRFKRVIVEIGR 249 Query: 236 AIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLL--YQESATIYPNTGPYTAMV 292 IV + L V+ + V+VD + + L Y + A V Sbjct: 250 YIVAPSGYLLLRVVLVKRRHNKAFVVVDGGMNVLIRPALYSAYHRIFVLGKQGKEMRADV 309 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI- 351 G C +GD+ V+ GD I+ E+ Y N +N P + +G I Sbjct: 310 VGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYTMSNNYNSTTRPAEVLVRENGRIS 369 Query: 352 KAIREFSYNDYYN 364 R + D + Sbjct: 370 LIRRRETEMDIFK 382 >gi|167625818|ref|YP_001676112.1| diaminopimelate decarboxylase [Shewanella halifaxensis HAW-EB4] gi|167355840|gb|ABZ78453.1| diaminopimelate decarboxylase [Shewanella halifaxensis HAW-EB4] Length = 414 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 65/382 (17%), Positives = 115/382 (30%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFDNAVSDHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K E + N + ++L + A +L K Sbjct: 86 LSRVIEAGGDPAKVVFSGVGKTVEEMEMALNLGIYCFNVESAAELEQLNLVALRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNC--- 167 + LR+NP V ++ G + E V G+ H Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMEGAEAIFTRANELPGLEVKGVDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 E K FL + + +I+ +GGG+ T + + L E + Sbjct: 206 EIKPFLDAMDRMLALIDRLAEQGIEIKHFDVGGGLGVTYDEEVPPQPDVYAAALLERLDG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + EN VD ++ + L Sbjct: 266 RDLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFALVDGAMNDLIRPSLYSAWQKIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 I T V G C GD G+ + GD ++ Y + +N Sbjct: 326 IERAGEMQTYDVVGPVCETGDFLGKDRELNIL-AGDYLAIRSSGAYGFTMSSNYNSRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + D Sbjct: 385 AELMVDGDKAYVIREREKLAQL 406 >gi|163734181|ref|ZP_02141622.1| diaminopimelate decarboxylase [Roseobacter litoralis Och 149] gi|161392717|gb|EDQ17045.1| diaminopimelate decarboxylase [Roseobacter litoralis Och 149] Length = 421 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 117/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+YL LL + + A+K + + TL Q G S Sbjct: 25 VGTPFYLYSTATLLRHFRLFDEALDGMDHLVCYAMKAASNQAILKTLAQAGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKD--KAQKLHK 116 E + G+ ++ K A+ + ++ A + Sbjct: 85 EYLRAKAAGVPGDKIVFSGVGKTAAEIRLALEGGIRQFNVESEPEMEVLNATALAMGVTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169 I +R+NP V + ++ G + V G+ H + Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPISRAHEVYALAASLKGLEVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F A + + + I + LGGG+ + +K Sbjct: 205 TDLAPFEAAYDKVAELTGQLRAQGHNIRRLDLGGGLGIPYTRDNQAPPLPSDYGAMIKRK 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG IV N + + V+ + ++ +I+D ++ + + Sbjct: 265 LGHLGCEIEIEPGRLIVGNAGIMVSEVIYVKSGEDRDFLIIDGAMNDLIRPAMYEAYHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + G C +GD F PV G+ ++F Y + +N Sbjct: 325 IPVVEPDPGIEQVKFDIVGPVCESGDTFARARVMPPVAAGELVAFRSAGAYGAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D ++++ Sbjct: 385 SRPLIPEVLVHEDQFAVIRPRPTFDEMIKR 414 >gi|332716389|ref|YP_004443855.1| Diaminopimelate decarboxylase [Agrobacterium sp. H13-3] gi|325063074|gb|ADY66764.1| Diaminopimelate decarboxylase [Agrobacterium sp. H13-3] Length = 422 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 114/389 (29%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + A+K + + TL + G S Sbjct: 25 VGTPFYVYSTATLERHYKVFSGAFADVDAMVCYAMKANSNQAVLRTLAKLGAGIDVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ K A+ + + +L +A K Sbjct: 85 ELRRALGAGVPANRIMFSGVGKTVAEMDYALEAGIYCFNIESEPELEVLNLRAVKAGKRA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + RINP V + ++ G + V G+ H + Sbjct: 145 HVSFRINPDVDARTHAKISTGKKENKFGISYERARAVYAHAATLPGIEVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + + + I + +GGG+ ++ + +K Sbjct: 205 TELQPFEDAFRLLRELVESLRADGHTISHVDIGGGLGIPYREDNNPPPLPDAYAHIVKNE 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + + +I EPG IV N L T V+ + + KN VIVD ++ + L Sbjct: 265 LKSLNCKIITEPGRLIVGNAGILVTEVIYVKDGGEKNFVIVDGAMNDLIRPTLYEAYHGI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + A + G C GD + GD I+ Y + +N Sbjct: 325 RPVVQPAVDAPRIKADIVGPVCETGDYLALDREMAAPQPGDLIAVSSAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D +Y + Sbjct: 385 SRLLVPEVLVKGDKFHVIRPRGTYEELIA 413 >gi|77920014|ref|YP_357829.1| diaminopimelate decarboxylase [Pelobacter carbinolicus DSM 2380] gi|77546097|gb|ABA89659.1| diaminopimelate decarboxylase [Pelobacter carbinolicus DSM 2380] Length = 417 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 128/385 (33%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L +L+ + + ++K + + T + G S Sbjct: 25 VGTPFYVYSHATLSRHLEAFSSAFADVPHLICYSIKANSNLAVLKTFVSHNAGFDIVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y+ K A + +L+ A +L KK Sbjct: 85 ELFRAQQVGCDPAKIVYSGVGKTEAEIADALQAGILMFNVESRQELDTINAVAGRLGKKA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169 G+ R+NP V ++ G ++ V G+ H + Sbjct: 145 GIAIRVNPDVDPQTHPYISTGMKKAKFGINISQALDDYRLAASLPNLEVIGVDCHIGSQL 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223 F + I + + I+++ LGGG+ T ++ D+ + + E ++ Sbjct: 205 TKLSPFVDAIAKIRELVQTLQNEGFGIKYLDLGGGLGITYEEEEPPSPADYAEVIIEGTK 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---A 279 V + EPG +V N L + VL + E KN VIVD+++ L A Sbjct: 265 GLGVTLVFEPGRVMVGNAGMLVSKVLYVKEGEAKNFVIVDAAMNDLTRPALYGSYQGIQA 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + A V G C +GD + GD ++ Y + +N Sbjct: 325 VDRSTSDTIVADVVGPICESGDFLAQDREITAFSQGDLLAVASAGAYGFTMSSNYNSRRR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + D + + +Y+D Sbjct: 385 VPEIMVKGDQVMVIRKRETYDDLIK 409 >gi|88797197|ref|ZP_01112787.1| LysA [Reinekea sp. MED297] gi|88780066|gb|EAR11251.1| LysA [Reinekea sp. MED297] Length = 416 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 68/384 (17%), Positives = 129/384 (33%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ +Q + + D + + A+K + G+ L + G S+ E Sbjct: 26 GTPLYIYSRQAIEHQFDAYQQGLGDHPGLICYAVKANSNLGVLSLLAKRGAGFDIVSIGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + E ++ A+ + ++L + A + Sbjct: 86 LERVLAAGGAPEKIVFSGVAKKASEMRRALEVGIHCFNVESQAELERLNSVAGDMGIQAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNC--- 167 I LR+NP V ++ G + E + V G+ H Sbjct: 146 ISLRVNPDVDAKTHPYISTGLKQNKFGVDHRLARAFYQRANELQHIRVIGMDCHIGSQLL 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV----KDFCQRLKEFSE 223 E K F L + E +E I +GGGI D + +++ ++L + Sbjct: 206 EAKPFEDAVDRLLTLLDELKQDGIALEHIDMGGGIGVKYTDQDIEPDVRNYIRKLVGHLK 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282 ++ + LEPG +IV N L T V + +N ++ IVD+ + + L + Sbjct: 266 DRNLALILEPGRSIVANAGILVTEVEYLKDNGEHHFGIVDAGMNDLIRPALYQAWMDIVP 325 Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 N + + G C GD G+ + GD ++ + Y+ + +N Sbjct: 326 VNRNADGHSASWDIVGPICETGDFLGKARDLS-LTPGDLLAVKSAGAYSFVMASNYNTRE 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 P + D + + D Sbjct: 385 RPAEVLVQGDAHTVVRQRETLTDL 408 >gi|222823390|ref|YP_002574964.1| carboxynorspermidine decarboxylase [Campylobacter lari RM2100] gi|222538612|gb|ACM63713.1| carboxynorspermidine decarboxylase [Campylobacter lari RM2100] Length = 387 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 131/377 (34%), Positives = 206/377 (54%), Gaps = 18/377 (4%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y++++ KL N + + + + K+LLALK FA G D + +Y+ G T S L+E Sbjct: 13 TPAYVVEENKLRKNCELLAKVSEQSEAKILLALKGFAFSGAMDIVGEYLSGCTCSGLWEA 72 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E E H ++ A+K+ EID ++ + ++FN+ +Q K K + K IGLR+N Sbjct: 73 KYAKEYMDKEIHTFSPAFKEDEIDEIIKLSNHLVFNSFNQFK--KYKEKAKIKSIGLRVN 130 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 P S + + +P FSRLG + D +I +VNGL FH CE +S +L E Sbjct: 131 PEFSVAPKEIYNPCGRFSRLGIRAVDFENEDISDVNGLHFHALCE-ESAHSLELVLNAFE 189 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 +F FI ++W++ GGG H T + Y + K+F++KY VQ+YLEPGEA+ T Sbjct: 190 AKFAKFIKNMKWVNFGGGHHITKEGYDTQKLIDLCKKFADKYGVQVYLEPGEAVGWQCGT 249 Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTGPY 288 L +V+DI EN K + I+D+S EAH+PD ++ ++ + + Sbjct: 250 LVASVVDIIENEKKIAILDTSSEAHMPDTIIMPYTSEVLNARILASRDGQNYSELKENEF 309 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 ++ G +CLAGDI GE+ F + +KIG +I F D A Y+I + FNG+ +P + + + Sbjct: 310 AYLLGGNTCLAGDIMGEYAFNQELKIGQKIVFLDQAHYSIVKNTTFNGVKLPNLMFLDKN 369 Query: 349 GTIKAIREFSYNDYYNN 365 G + +REFSY +Y Sbjct: 370 GNLSMVREFSYENYSKR 386 >gi|16079395|ref|NP_390219.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. 168] gi|221310255|ref|ZP_03592102.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. 168] gi|221314579|ref|ZP_03596384.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319501|ref|ZP_03600795.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323777|ref|ZP_03605071.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. SMY] gi|321311813|ref|YP_004204100.1| diaminopimelate decarboxylase [Bacillus subtilis BSn5] gi|226694207|sp|P23630|DCDA_BACSU RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|410117|gb|AAA67473.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. 168] gi|2634773|emb|CAB14270.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. 168] gi|320018087|gb|ADV93073.1| diaminopimelate decarboxylase [Bacillus subtilis BSn5] Length = 439 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 129/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + +AG ++ A K F++ M + S Sbjct: 30 GTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVSG 89 Query: 61 YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F E ++ ++ A+ I+ + ++ +D ++ Sbjct: 90 GELYTAVAAGFPAERIHFHGNNKSREELRMALEHRIGCIVVDNFYEIALLEDLCKETGHS 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G + ++SE + G+ H Sbjct: 150 IDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC------- 215 + F + I K+ + + ++LGGG + Sbjct: 210 SQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIRYTEDDEPLHATEYVEKI 269 Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +KE + +Y I ++EPG ++V + T TV E V + ++ Sbjct: 270 IEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEVPGVRQYVAVDGGMNDNI 329 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A T + G+ C +GD+ VK GD ++ Sbjct: 330 RPALYQAKYEAAAANRIGEAHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + ++ +Y D Sbjct: 390 YGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVK 428 >gi|114049121|ref|YP_739671.1| diaminopimelate decarboxylase [Shewanella sp. MR-7] gi|113890563|gb|ABI44614.1| diaminopimelate decarboxylase [Shewanella sp. MR-7] Length = 414 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 58/382 (15%), Positives = 106/382 (27%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFNNAVADHPHLVCYAVKANSNLAVLNVLARLGSGFDIVSGGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ + ++L + A +L K Sbjct: 86 LARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNQVAGRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEVVFARAHALPHLQVKGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + + IE +GGG+ T D + L Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDDETPPHPDVYAAALLARLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + + K IVD ++ + L Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + G C GD G+ + GD + Y + +N Sbjct: 326 NPRDEQAQVFDIVGPVCETGDFLGKDRALA-IAAGDLLVVRSSGAYGFAMASNYNTRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + D Sbjct: 385 AEVMVDGDKAYLVREREKLAQL 406 >gi|163851214|ref|YP_001639257.1| diaminopimelate decarboxylase [Methylobacterium extorquens PA1] gi|163662819|gb|ABY30186.1| diaminopimelate decarboxylase [Methylobacterium extorquens PA1] Length = 422 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 112/389 (28%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL G S Sbjct: 25 VGTPFYCYSTATLERHYRVFAEAFAGDDALVCFAMKANSNQAVLATLAHQGAGMDIVSEG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ GE ++ ++ A+ +N + +L + A + Sbjct: 85 ELRRALAAGVPGERIVFSGVGKTREEMAAALDANILCFNVESEPELAALSEVAVARGRKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + +R+NP V + ++ G + G+ H + Sbjct: 145 PVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARAVYAGAARLPGLEIVGVDAHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + + + ++ + GGG+ L+ Sbjct: 205 TDLTPFDNAARLLCELARDLLADGHRLHHVDFGGGLGIPYRDDNAPPPDPTALAAILRPH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + ++ E G I N L T V+ + + K VIVD ++ + L A Sbjct: 265 FKPLGLRPVFEIGRMIAGNAGILVTRVIYVKPTDEKTFVIVDGAMNDLIRPTLYEAFHAL 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 TA V G C +GD V GD I+ Y + +N Sbjct: 325 RPVREPAPDTPRLTADVVGPVCESGDYLALGREMPMVAPGDLIAVMSAGAYGAVQACTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + SY+D Sbjct: 385 SRRLVPEVLVTGDRSAVVRPRPSYDDLIR 413 >gi|254282311|ref|ZP_04957279.1| diaminopimelate decarboxylase [gamma proteobacterium NOR51-B] gi|219678514|gb|EED34863.1| diaminopimelate decarboxylase [gamma proteobacterium NOR51-B] Length = 417 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 52/381 (13%), Positives = 108/381 (28%), Gaps = 23/381 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + + N + A+K + + + L + G S Sbjct: 24 VGTPVYVYSRADIEAAFGEYQSALANRPHLICYAVKANSNLAVLNLLARLGAGFDIVSEG 83 Query: 62 E-VMLGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E + ++ K CE A+ + + ++LN + A Sbjct: 84 ELARVIAAGGDPSKVVFSGVGKSCEGIRQALDAGIRCFNVESEAELNVLNEIAAECGKVA 143 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCE- 168 + LR+NP V + ++ G + G+ H + Sbjct: 144 PVSLRVNPDVDANTHPYISTGLKENKFGVDIERAKDLYEQAAAMSFIEPVGVDCHIGSQL 203 Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSE 223 F+ L + ++ + LGGG+ + + + Sbjct: 204 LSITPFIDAVDRLLALVDALESSGITLKHLDLGGGLGVQYGEEQAPAISAYIAALTDRLG 263 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES---A 279 ++ EPG ++V L T V + VD+++ + L Sbjct: 264 DREFELIFEPGRSVVAMAGALVTRVNYLKPTEHRNFALVDAAMNDLIRPALYDAWMDILP 323 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + V G C GD G+ ++ D + Y + +N Sbjct: 324 ATQRHDTAHRWDVVGPVCETGDFLGKDRELA-LQPDDLLVVTGAGAYGFVMASNYNTRPR 382 Query: 340 PTIAVKNVDGTIKAIREFSYN 360 P V + + + Sbjct: 383 PAEVVVDKGTLHVVRQREALE 403 >gi|298369659|ref|ZP_06980976.1| diaminopimelate decarboxylase [Neisseria sp. oral taxon 014 str. F0314] gi|298282216|gb|EFI23704.1| diaminopimelate decarboxylase [Neisseria sp. oral taxon 014 str. F0314] Length = 406 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 64/379 (16%), Positives = 128/379 (33%), Gaps = 23/379 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFENYQTAFAALSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A++L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALHAGVKCFNMESIPEIDRIQKVAERLGKTAY 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAARQSHLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLIEACERILILVDRLADEGIVLEHLDLGGGVGIVYQDETVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P TA + G C GD + + GD + Y + + +N N Sbjct: 318 EPKNIPPLTADIVGPICETGDFLAKGRTLA-CEAGDLLVVRSAGAYGASMASNYNTRNRA 376 Query: 341 TIAVKNVDGTIKAIREFSY 359 + N + + R ++ Sbjct: 377 AEVLVNGNESKLIRRRETW 395 >gi|295399037|ref|ZP_06809019.1| diaminopimelate decarboxylase [Geobacillus thermoglucosidasius C56-YS93] gi|294978503|gb|EFG54099.1| diaminopimelate decarboxylase [Geobacillus thermoglucosidasius C56-YS93] Length = 438 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 61/399 (15%), Positives = 126/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + VK + A K F++ M + S Sbjct: 30 GTPLYIYDVALIRARARAFKEAFQKHRVKSQVAYASKAFSSIAMVQLAEEEGLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E ++ ++ I A+ S ++ + +L + + Sbjct: 90 GELYTALQAGFPPERIHFHGNNKSREELIMALESGIGCVVVDNFYELELLEQLSKRHGKT 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G E + + S +V G+ H Sbjct: 150 TAILIRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEALRKALSSPSFSVLGIHCHIG 209 Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + L + + I + ++LGGG Sbjct: 210 SQIFETTGFVLAAQKIFQKIANWKEMYGFVPAVVNLGGGFGIRYTSEDDPIPVSEYVDKI 269 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHV 269 + +K+ + ++ + ++EPG +IV + T ++ N++ V VD + ++ Sbjct: 270 IEEVKKQVNEQNIPMPEIWIEPGRSIVGDAGTTIYSIGSQKEVPNVRRYVAVDGGMSDNI 329 Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N + G+ C +GD+ GD ++ Sbjct: 330 RPALYEAKYEAVLANRVLDEKNEIVSIAGKCCESGDMLIWDLPLPKANPGDYLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + ++ +Y D Sbjct: 390 YGYSMANNYNRIPRPAVVFVENGEAQLVVKRETYEDLVR 428 >gi|291484767|dbj|BAI85842.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. natto BEST195] Length = 441 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 128/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + AG ++ A K F++ M + S Sbjct: 32 GTPLYVYDVALIRERAKSFKQAFIFAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F E ++ ++ A+ I+ + ++ +D ++ Sbjct: 92 GELYTAVAAGFPAERIHFHGNNKSREELRMALEHRIGCIVVDNFYEIALLEDLCKETGHS 151 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G + ++SE + G+ H Sbjct: 152 IDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHCHIG 211 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC------- 215 + F + I K+ + + ++LGGG + Sbjct: 212 SQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIRYTEDDEPLHATEYVEKI 271 Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +KE + +Y I ++EPG ++V + T TV E V + ++ Sbjct: 272 IEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEVPGVRQYVAVDGGMNDNI 331 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A T + G+ C +GD+ VK GD ++ Sbjct: 332 RPALYQAKYEAAAANRIGEAHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 391 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + ++ +Y D Sbjct: 392 YGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVK 430 >gi|282163529|ref|YP_003355914.1| diaminopimelate decarboxylase [Methanocella paludicola SANAE] gi|282155843|dbj|BAI60931.1| diaminopimelate decarboxylase [Methanocella paludicola SANAE] Length = 426 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 65/390 (16%), Positives = 126/390 (32%), Gaps = 29/390 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ +L +N K GV L A K + + L Q G + S E Sbjct: 31 GTPLYVTNEDRLRDNYRRFAKAFK--GVPLFFAAKSNNSLVVQRILAQEGAGADAFSDGE 88 Query: 63 VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118 + L + + D E+ + + ++ +L A + Sbjct: 89 IYLARLAGIPAQKILFTGNSKTDAELAYAVEAGVMVSIDSHDELISLSHIAKAHGKTMNV 148 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171 R+NP +S S+ G ++ +++ + N G+ H + Sbjct: 149 AFRVNPEISGDTHPKLATGLKISKFGIPRQEIVDTYKEASKLPGINPVGIHCHIGSQILE 208 Query: 172 FLCFSAMLKNIEKEFGHF--ITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSEK 224 + + + +E++ +GGG + P L + ++ Sbjct: 209 VSPYVETVNRMMDLVAQISKFVDLEFVDIGGGFGIPYQKDVKAPTPQDYAKAILPLYRKR 268 Query: 225 YS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 ++++EPG IV +TT L T V + + + VD+ + + Sbjct: 269 CKEIGISPELHIEPGRYIVADTTVLLTHVNTVKKAYSTFIGVDAGFNTLIRPAMYDSYHE 328 Query: 280 TIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + N T V G C +GDI VK D I+ D Y + + Sbjct: 329 VVVANKADKKSASTYTVAGPICESGDILARDRKLPQVKKDDIIALLDAGAYGFCMSSQYL 388 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + +Y+D N Sbjct: 389 ARPRSAEVLIHDGQAELIRKRETYDDLIQN 418 >gi|113968735|ref|YP_732528.1| diaminopimelate decarboxylase [Shewanella sp. MR-4] gi|113883419|gb|ABI37471.1| diaminopimelate decarboxylase [Shewanella sp. MR-4] Length = 414 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 58/382 (15%), Positives = 106/382 (27%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFNNAVADHPHLVCYAVKANSNLAVLNVLARLGSGFDIVSGGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ + ++L + A +L K Sbjct: 86 LARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNQVAGRLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEVVFARAHALPHLQVKGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + + IE +GGG+ T D + L Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDDETPPHPDVYAAALLARLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + + K IVD ++ + L Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + G C GD G+ + GD + Y + +N Sbjct: 326 NPRDEQAQVFDIVGPVCETGDFLGKDRALA-IAAGDLLVVRSSGAYGFAMASNYNTRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + D Sbjct: 385 AEVMVDGDKAYLVREREKLAQL 406 >gi|229496138|ref|ZP_04389858.1| carboxynorspermidine decarboxylase [Porphyromonas endodontalis ATCC 35406] gi|229316716|gb|EEN82629.1| carboxynorspermidine decarboxylase [Porphyromonas endodontalis ATCC 35406] Length = 371 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 117/369 (31%), Positives = 181/369 (49%), Gaps = 10/369 (2%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++ L NL + A V++++A K FA W +F +Y G+T+SS +E Sbjct: 5 PRYVVEEPLLRRNLSLIRKVADEAKVEIIVAFKAFALWKLFPIFREYGFGSTASSPWEAR 64 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 LG+E + HA++ AY+ + C I FN++SQ F GLRINP Sbjct: 65 LGYEGLERKAHAFSPAYRAQDWAEWTRCCSHITFNSLSQYRAFCT--PSSEVSYGLRINP 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L +P P SR G ++ + + GL H CE SF +L IE+ Sbjct: 123 GYSPVETDLYNPALPGSRFGLSPEELGLHLPEGIEGLHVHVLCEGNSFQ-LEKLLSIIEQ 181 Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTT 243 F +++ W++LGGG T K+Y V LK F +++ Q+ +EPG A T Sbjct: 182 RFASPLSEACWLNLGGGHLMTHKEYNVPHLIAVLKAFRQRHPHLQLIMEPGSAFAWQTGF 241 Query: 244 LNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIY-----PNTGPYTAMVCGRSC 297 L + VLDI + I+D S H+PD L I P G T + G SC Sbjct: 242 LESHVLDIVEHDGIKTAILDVSFTCHMPDCLEMPYKPVIRGAHHDPVEGLPTYRLGGNSC 301 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 L+GD G++ F+KP+++GD + FED+ Y + + FNG+ P + ++ +G +R F Sbjct: 302 LSGDFLGDWSFDKPLEVGDTLIFEDMIHYTTVKTHMFNGVAHPDLVLQKSNGEEVLLRRF 361 Query: 358 SYNDYYNNL 366 Y DY + Sbjct: 362 GYQDYKERM 370 >gi|149178525|ref|ZP_01857113.1| diaminopimelate decarboxylase [Planctomyces maris DSM 8797] gi|148842640|gb|EDL57015.1| diaminopimelate decarboxylase [Planctomyces maris DSM 8797] Length = 423 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 57/394 (14%), Positives = 119/394 (30%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ K L L + ++K + T+N S E Sbjct: 26 GTPLWVYSKSDFLGRLKEIQDAFAEVDPVICYSVKANGNLSILKTMNDAGSSFDVVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKKIG 119 + + K E D ++F+ + ++L+ A +L+ Sbjct: 86 LFRVQQAGADTSRVVFAGVGKTDEEIRQALKADILMFDVESEAELDAIARIAGELNCVGR 145 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170 LR+NP + + ++ G + ++ E + G+ H Sbjct: 146 VALRLNPDIDAKTHHKTTTGKKGNKFGMDIERATELADKVLKDEHLELTGIHMHLGSPIL 205 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 S ++ +K + + W++LGGG + K + + + ++ Sbjct: 206 STDPYAKAVKKGAEVISQLREKGHNTNWLNLGGGFGISYKTDEGPSAQTYADVIVPTIKE 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES----- 278 ++ LEPG I N+ L + ++ I D + V + Sbjct: 266 IGCRLALEPGRFIAGNSGVLISQIVFTKREGGKLFYIQDGGMTDLVRPAMYDSYHRVWPV 325 Query: 279 ----ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + G A V G C + D F + + P++ GD + Y Sbjct: 326 KPKVPMPFDCEGEIEGCEPADVVGPVCESCDYFAKDRYLPPMQRGDYLCMFSAGAYGSVM 385 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + + R +Y + Sbjct: 386 SSNYNARPRSAEILVDGSENQVIRRRETYEELIA 419 >gi|226227158|ref|YP_002761264.1| diaminopimelate decarboxylase [Gemmatimonas aurantiaca T-27] gi|226090349|dbj|BAH38794.1| diaminopimelate decarboxylase [Gemmatimonas aurantiaca T-27] Length = 423 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 119/386 (30%), Gaps = 23/386 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + + + + ++ A+K + + L + G S Sbjct: 27 VGTPAYVYCAGTIRARYERLAHAFEGVPHRIHFAMKANSNLAVLRLLQELGAGVDIVSGG 86 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKI 118 E+ E F G ++ K + + I + ++L A + Sbjct: 87 ELYRAREAGFTGRDVVFSGVGKTVQEIEQALDDRVLLINVESEAELVTIDAVAARKGVVA 146 Query: 119 GLRINPSVS---YSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168 + I + + + G D E + GL H + Sbjct: 147 PIAIRVNPEVTVETPHAYIRTGEKGQKFGIPRDDITRLVSLIRELPHIALRGLGMHLGSQ 206 Query: 169 NKSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEF 221 + L + + ++ +GGG+ + V+D+ Q ++ Sbjct: 207 IGNADPLRDALPRLLVAVEAARAEGHDVRYLDVGGGLSVPYEPDERDADVEDYAQIVRAA 266 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLL--YQES 278 + + + + LEPG IV TL T VL K+ ++ D+ + + L Y Sbjct: 267 ATETGLTLLLEPGRYIVAEAGTLLTQVLYRKHAAGKDFIVTDAGMSDLIRPALYQAYHAI 326 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + T TA V G C +GD F + V G+ ++ Y + +N Sbjct: 327 EAVVDTTRTITADVVGPICESGDFFAKNRELPDVSAGELLAIRTTGAYGYTMTSNYNSRP 386 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + Y D Sbjct: 387 RAVEVLADGSRFAIITERERYEDLVR 412 >gi|295690237|ref|YP_003593930.1| diaminopimelate decarboxylase [Caulobacter segnis ATCC 21756] gi|295432140|gb|ADG11312.1| diaminopimelate decarboxylase [Caulobacter segnis ATCC 21756] Length = 421 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 63/390 (16%), Positives = 119/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSS 58 + TP Y+ + L + AGV + A+K + + L G + Sbjct: 25 VGTPVYVYSRATLERHFTVFRDALALAGVVDPLIAYAVKANSNVAVLKVLGDLGAGADTV 84 Query: 59 SLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL- 114 S E+ GE ++ K A + I + +L+ A +L Sbjct: 85 SEGEIRRALAAGIPGERIVFSGVGKTRREIAFALTTGVAEINVESEPELDLIAQVAAELG 144 Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNN 166 K+ R+NP V+ + ++ G + G+ H Sbjct: 145 VKAKVAFRVNPDVAAGGHAKIATGKSENKFGVSFAEAARLYANASNNSSLEPVGVACHIG 204 Query: 167 CENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD----FCQRLK 219 + A + +E + LGGG+ + P F + Sbjct: 205 SQITDLEPMRAAFTKMRGLVEQLLGEGLSVERLDLGGGLGVPYFNSPEPPSPAAFAAMVG 264 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYLLYQE 277 E ++ V + EPG I N L + V+ + E + +D+++ + + Sbjct: 265 EVTQGLPVTLAFEPGRVIAANAGVLVSEVVHVHERPEGRKFLVIDAAMNDLIRPAMYDAF 324 Query: 278 SA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + G V G C GD F P GD ++F Y + +N Sbjct: 325 HDIRPVIQRGGETVYDVVGPVCETGDTFTRDRALPPFTTGDLVAFMSAGAYGAAMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D + +Y + Sbjct: 385 TRPLVPEVLVDGDRYAVIRKRPTYEEILAR 414 >gi|291279674|ref|YP_003496509.1| carboxynorspermidine decarboxylase [Deferribacter desulfuricans SSM1] gi|290754376|dbj|BAI80753.1| carboxynorspermidine decarboxylase [Deferribacter desulfuricans SSM1] Length = 394 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 137/370 (37%), Positives = 212/370 (57%), Gaps = 7/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+I + + N ++ AGVK+LLA K + + +++Y+ G +S L+ Sbjct: 20 IDTPAYVISEDAIEYNCQILKRVQDEAGVKILLAQKAYTLPVTYPLISKYLYGVCASGLW 79 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG++ F E H Y AY++ EID ++ D +IFN+++QL K+ + + K++GLR Sbjct: 80 EAKLGYKHFKKEVHTYAPAYRNDEIDEIIEYSDMVIFNSINQLKKYGELVKNRGKQVGLR 139 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S + L +P P SR G +D ++ V+G FH CE S F +LK+ Sbjct: 140 VNPGHSEVEVDLYNPCIPGSRFGVNPEDIEGQDLSIVDGFHFHALCEQNS-DVFVRVLKS 198 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--IYLEPGEAIVT 239 EK FG +I +++W++ GGG H T DY +K F LK+FS++Y +YLEPGEA+V Sbjct: 199 FEKRFGKYINELKWVNFGGGHHITRDDYDLKLFIDTLKDFSKRYGKNLDVYLEPGEAVVL 258 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 + T VLDI N ++ IVDSS E H PD L + I + + + G Sbjct: 259 HAGVFITQVLDIINNGVDIAIVDSSAETHTPDVLAMPYTPKILGAGDWDEYEFKYRIGGC 318 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 SCLAGD FG + F+ P+K+GD++ D+A Y+ + N FNG+ +P+I V N+ IK ++ Sbjct: 319 SCLAGDFFGYYSFKNPLKVGDKLIMLDMALYSFVKNNTFNGVKLPSIVVINLKDGIKWVK 378 Query: 356 EFSYNDYYNN 365 +SY+D+ N Sbjct: 379 NYSYSDFENK 388 >gi|312110358|ref|YP_003988674.1| diaminopimelate decarboxylase [Geobacillus sp. Y4.1MC1] gi|311215459|gb|ADP74063.1| diaminopimelate decarboxylase [Geobacillus sp. Y4.1MC1] Length = 438 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 61/399 (15%), Positives = 126/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + VK + A K F++ M + S Sbjct: 30 GTPLYIYDVALIRARARAFKEAFQKHRVKSQVAYASKAFSSIAMVQLAEEEGLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E ++ ++ I A+ S ++ + +L + + Sbjct: 90 GELYTALQAGFPPERIHFHGNNKSREELIMALESGIGCVVVDNFYELELLEQLSKRHGKT 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G E + + S +V G+ H Sbjct: 150 TAILIRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEALRKALSSPSFSVLGIHCHIG 209 Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + L + + I + ++LGGG Sbjct: 210 SQIFETTGFVLAAQKIFQKIANWKAMYGFVPAVVNLGGGFGIRYTSEDDPIPVSEYVDKI 269 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHV 269 + +K+ + ++ + ++EPG +IV + T ++ N++ V VD + ++ Sbjct: 270 IEEVKKQVNEQNIPMPEIWIEPGRSIVGDAGTTIYSIGSQKEVPNVRRYVAVDGGMSDNI 329 Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N + G+ C +GD+ GD ++ Sbjct: 330 RPALYEAKYEAVLANRVLDEKNEIVSIAGKCCESGDMLIWDLPLPKANPGDYLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + ++ +Y D Sbjct: 390 YGYSMANNYNRIPRPAVVFVENGEAQLVVKRETYEDLVR 428 >gi|163741842|ref|ZP_02149232.1| diaminopimelate decarboxylase [Phaeobacter gallaeciensis 2.10] gi|161385015|gb|EDQ09394.1| diaminopimelate decarboxylase [Phaeobacter gallaeciensis 2.10] Length = 421 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 118/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+YL LL + K + A+K + + TL Q G S Sbjct: 25 VGTPFYLYSTATLLRHFHLFNDALKGMDHLVCYAMKAASNQAILKTLAQAGAGMDVVSQG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E + G+ ++ K + A+ + +++ A +L Sbjct: 85 EYLRAKAAGVPGDRIVFSGVGKTQDEIRTALSGGIRQFNVESEPEMDVINAVALELGVVA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + R+NP V + ++ G E + V G+ H + Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYARAASLPGLKVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + + + + I + LGGG+ + ++ Sbjct: 205 TELAPFELAYQKVAELTEQLRADGHDIHRLDLGGGLGIPYTRSNDTPPLPVEYGAMVQRT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N + + V+ + I+D ++ + + Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGIMVSKVIYVKSGEDRDFLIIDGAMNDLIRPAMYEAYHDI 324 Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + G C GD F P++ GD ++F Y + +N Sbjct: 325 VPVIEPSAGVEQRAYDIVGPVCETGDTFARHRDMSPLEAGDLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + N D R +++ N Sbjct: 385 SRPLIPEVLVNGDQFAVIRRRPDFDEMINR 414 >gi|291531604|emb|CBK97189.1| carboxynorspermidine decarboxylase [Eubacterium siraeum 70/3] Length = 392 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 122/385 (31%), Positives = 194/385 (50%), Gaps = 23/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ ++ L N + ++ G K+LLA K F+ + + ++ Y+ GTT+S LY Sbjct: 11 VDTPCYVTEECYLRRNCEILKSVQDMTGCKILLAQKAFSMYSTYPLISGYLSGTTASGLY 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG+E FG ETH ++ AY D EI+ + +FN++ Q +D + H I + Sbjct: 71 EARLGYEYFGNETHVFSPAYTDKEINELAKYAGHFVFNSIRQFALHRDAVKDKHCLIRVN 130 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLC 174 S + DP P SRLG+ E + ++GL FH CE S Sbjct: 131 PRFSTQE-GHEIYDPCAPGSRLGQTLASFEEDIKRYGEEILDEIDGLHFHTLCEQNSDDL 189 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + +E +FG ++ ++ I+ GGG H T DY + + + F +Y +++YLEPG Sbjct: 190 MRTAKE-VEVQFGKYLDKMSVINFGGGHHITRDDYDIDTLVEVINHFKNEYGLEVYLEPG 248 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV----DSSVEAHVPDYLLYQESATIYPNTG---- 286 EA+ N L TTVLD+ + N D+S H+PD L I G Sbjct: 249 EAVALNAGFLVTTVLDVIDGKINGEDDIAILDASAACHMPDVLEMPYRPVIIQPNGNIAG 308 Query: 287 -----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T + G +CLAGD+ G++ F++P+K GDR+ D++ Y++ + N FNG+ +P+ Sbjct: 309 EKGERAVTVRLGGNTCLAGDVIGDYSFDEPLKPGDRLVLCDMSIYSMVKNNTFNGMALPS 368 Query: 342 IAVKNVDGTIKAIREFSYNDYYNNL 366 I N ++ IREFSY+D+ L Sbjct: 369 IY-YNTSLGMRKIREFSYDDFRCRL 392 >gi|56461656|ref|YP_156937.1| diaminopimelate decarboxylase [Idiomarina loihiensis L2TR] gi|56180666|gb|AAV83388.1| Diaminopimelate decarboxylase [Idiomarina loihiensis L2TR] Length = 420 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 73/385 (18%), Positives = 125/385 (32%), Gaps = 26/385 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P Y+ K ++L N KL A+K + + L ++ G S E+ Sbjct: 28 SPLYVYSKGQILKNWREFQQYWPAP-HKLCYAVKANSNLAILQLLAEHGAGFDIVSGGEL 86 Query: 64 MLGHEKFG--GETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118 G G+ VA KD I A+ + + ++L + +D A + Sbjct: 87 QRVLMAGGKAGDVVFSGVAKSKDEIIMALEAGIGCFNVESEAELERIQDIAAAMDKQAPV 146 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENKS 171 LR+NP V ++ G N+ G H + + Sbjct: 147 SLRVNPDVDAKTHPYIATGMKANKFGISMSLAKPVFLKAHSLPNINLIGADCHIGSQIMT 206 Query: 172 FLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFSEK 224 F + + E Q+ + LGGG + D + +K Sbjct: 207 AEPFLDAAQRMFNLVSELEKDGVQLTHLDLGGGFGVAYQPEEPLDKSFYLKELVKLAENY 266 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283 + + LEPG AI + L TTV I + + VD+ + + L + Sbjct: 267 PQITLVLEPGRAITADAGVLLTTVEYIKPSEDKNFVLVDAGMNDLIRPSLYQAWHDILPA 326 Query: 284 NT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G + G C GD FG V+ GD ++ + Y + +N Sbjct: 327 HENKRGGDQLNDIVGPVCETGDFFGHARHL-NVQQGDVLAIKHAGAYGFTMASNYNSRGR 385 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P + + D S+ND Sbjct: 386 PPEVLVSGDNATLIRERESFNDLVR 410 >gi|87121333|ref|ZP_01077223.1| diaminopimelate decarboxylase [Marinomonas sp. MED121] gi|86163490|gb|EAQ64765.1| diaminopimelate decarboxylase [Marinomonas sp. MED121] Length = 418 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 58/383 (15%), Positives = 118/383 (30%), Gaps = 26/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ L + + + A+K + + + L + G S+ E Sbjct: 26 GTPCYVYSRETLERHYKAYADAFASHPSLICYAVKACSNIAILNVLAKMGAGFDIVSVGE 85 Query: 63 VMLG-HEKFGGETHAYNV-AYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ + E+ A+ + +L + + A+KL Sbjct: 86 LERVLRAGGDASKVMFSGLGKQAHEMERALEVGIHCFNIESEFELYRLNEVAEKLGKKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + +V G+ H + Sbjct: 146 VSLRVNPDVDAKTHPYISTGLKENKFGIDINDAVRIYTIAHELPYLDVMGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 F + K +I+ + LGGG+ +D D+ + E Sbjct: 206 ELTPFIDAFDRLLKLIDELALVGIEIKHVDLGGGLGVRYRDEVPPVPADYAALVLPKVEN 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283 + + EPG +I N L T V + + I+D ++ + L + Sbjct: 266 RAFSLAFEPGRSIAANAGILVTQVEFLKCSEHKNFAIIDGAMNDLIRPSLYSAWMDIVPV 325 Query: 284 NTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G C GD G+ ++ GD ++ Y + +N Sbjct: 326 KLKSQATGNKKLYDLVGPVCETGDFLGKDREL-DLEAGDLLAVRSAGAYGFTMSSNYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYN 360 N + + D + Sbjct: 385 NRAAEVMVDGDKVHLIRARETIE 407 >gi|119943834|ref|YP_941514.1| diaminopimelate decarboxylase [Psychromonas ingrahamii 37] gi|119862438|gb|ABM01915.1| diaminopimelate decarboxylase [Psychromonas ingrahamii 37] Length = 421 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 59/389 (15%), Positives = 125/389 (32%), Gaps = 28/389 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A+K + + + + + G S+ E Sbjct: 27 GTPAYIYSRATIERHWQAFDSAAGKHPHLICYAVKANSNLAVLNLMARMGSGFDIVSVGE 86 Query: 63 VMLG-HEKFGGETHAYNV-AYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKK 117 +M + ++ + EI A+ +N ++S+L + A+ + Sbjct: 87 LMRVIQAGGDPKKIVFSGVGKTEIEISAALQANIMCFNVESISELYRINSVAKALNVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167 I +RINP++ ++ G + + ++ + G+ H Sbjct: 147 ISIRINPNIDAGTHPYISTGLKENKFGIEIEQALDVYKIASDLEFLEIKGVDCHIGSQLT 206 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 E F+ L + I + LGGG+ D + + + + + Sbjct: 207 EIAPFIEALDKLLILIDLLAEKGITISHLDLGGGLGVPYDDETPPEPAEYMTAIINRMAG 266 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY- 282 + + EPG AI+ N L T V + + KN IVD+++ + L I Sbjct: 267 RSLKLIFEPGRAIMANAGVLVTKVEFLKLNDYKNFAIVDAAMNDLIRPALYSAWQNIIPL 326 Query: 283 -------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + + G C GD G+ + GD + Y + +N Sbjct: 327 NTDYQDGQDRPVRSYDIVGPICETGDFLGKERQLA-LAEGDYLVIRSTGAYGSTMSSNYN 385 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D + Sbjct: 386 SRCRAAEILVDGEKAFIVREREELKDLWR 414 >gi|114319371|ref|YP_741054.1| diaminopimelate decarboxylase [Alkalilimnicola ehrlichii MLHE-1] gi|114225765|gb|ABI55564.1| diaminopimelate decarboxylase [Alkalilimnicola ehrlichii MLHE-1] Length = 415 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 58/379 (15%), Positives = 121/379 (31%), Gaps = 24/379 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ K + + + ++ A+K + + L + G S Sbjct: 25 VGTPTYVYSKAAIESAWRGFDQALGDHPHQVCYAVKANSNLAVLQLLARLGSGFDIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--K 116 E+ ++ K D A+ + ++L++ A +L Sbjct: 85 ELERVLAAGGDPRRVVFSGVGKTADEMRRALEVGIRCFNVESTAELSRLNRVAGELRLTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 + LR+NP V ++ G + + +V G+ FH + Sbjct: 145 PVSLRVNPDVDARTHPYISTGLRENKFGIDIREAEAIYRQAANAAHLSVEGVDFHIGSQL 204 Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSE 223 + L+ + I + +GGG+ +D D+ + L + + Sbjct: 205 TDLSPIADALERVLALVDRLAAEGITIRHLDVGGGLGIRYRDETPPAAEDYARVLLDGLQ 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +++ +EPG A+V N L T V + + + + +VD+++ + L A Sbjct: 265 GRDLELLMEPGRAVVGNAGVLITRVQYLKDGSEQRFAVVDAAMNDLLRPSLYDGWHAITP 324 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 T + G C GD G+ + GD ++ Y + +N Sbjct: 325 VRPRADTDTLPWDIVGPVCETGDFLGKQRELA-LAEGDLLAVHSAGAYGFVMASNYNTRP 383 Query: 339 MPTIAVKNVDGTIKAIREF 357 P + Sbjct: 384 RPAEVLVAGGCHHLVRERE 402 >gi|114706749|ref|ZP_01439649.1| diaminopimelate decarboxylase protein [Fulvimarina pelagi HTCC2506] gi|114537697|gb|EAU40821.1| diaminopimelate decarboxylase protein [Fulvimarina pelagi HTCC2506] Length = 422 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 68/387 (17%), Positives = 117/387 (30%), Gaps = 25/387 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+Y LL + D + + A+K + + TL G S Sbjct: 25 IGTPFYCYSTATLLRHYDVFSSAFADIDAMVCYAMKANSNQAVLKTLADRGAGADVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQK--LHK 116 E++ + ++ K + + ++L +A L Sbjct: 85 ELLRALRVGIDPKKIMFSGVGKTIAEIDMAIASGIFCFNIESENELELISARAVDAGLTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + RINP V R + G + V G+ H + Sbjct: 145 HVSFRINPDVDAKTHAKISTGRKSDKFGIAYDRAESIYARARELPGVEVTGIDMHIGSQI 204 Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 K F L + +I I LGGG+ K+ + + +K Sbjct: 205 IDLKPFDEAFDRLATLVHRLRAAGHEISHIDLGGGLGVPYKNADATPPEPHAYAEIVKRH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +I EPG IV N L VL + ++ K VIVD+++ + L Sbjct: 265 VRDLGAKIVFEPGRMIVANAGILVARVLYVKKDEGKTFVIVDAAMNDLIRPTLYEAWHEI 324 Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 N TA + G C +GD G+ V GD + Y + + +N Sbjct: 325 QPVERAANRKTITADIVGPICESGDFLGKDREIVEVAEGDLVFLSSAGAYGAVQSSTYNS 384 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYY 363 + + + ++ Sbjct: 385 RPLIAETLVKGGEYAVIRERQTIDELI 411 >gi|262273212|ref|ZP_06051028.1| diaminopimelate decarboxylase [Grimontia hollisae CIP 101886] gi|262222790|gb|EEY74099.1| diaminopimelate decarboxylase [Grimontia hollisae CIP 101886] Length = 417 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 118/378 (31%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWHAFDKAVGDHPHLICYAVKANSNLGVLNVLARLGSGFDIVSQGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + + ++ K A+ + ++L++ A +L Sbjct: 87 LERVVAAGGDPKKVVFSGVGKTAPEMARALELGIKCFNVESEAELDRLNQIAGELGKKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LRINP V ++ G E +V+G+ H + Sbjct: 147 VSLRINPDVDAKTHPYISTGLKENKFGIAFDRAREVYHYANSLPHLDVHGIDCHIGSQLT 206 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + I + +GGG+ T P L+ + Sbjct: 207 DLAPFIESTDRLLGLIDDLRQDGIHITHLDVGGGLGVTYNDEKPPEPSDYAKALLERLAN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI- 281 +++ EPG AI N L T V + N + I+D+++ + L + Sbjct: 267 HQEIELVFEPGRAIAANAGVLLTKVEFLKHNEEKNFAIIDAAMNDLLRPALYQAWQEIVP 326 Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C GD G+ ++ GD ++ Y + +N Sbjct: 327 VKPRQGEAKTYDLVGPVCETGDYLGKDRSLV-LEAGDLLAVRSSGAYGFVMSSNYNTRCR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + + + Sbjct: 386 AAEVMVDGNQSHLVRQRE 403 >gi|325270905|ref|ZP_08137492.1| carboxynorspermidine decarboxylase [Prevotella multiformis DSM 16608] gi|324986702|gb|EGC18698.1| carboxynorspermidine decarboxylase [Prevotella multiformis DSM 16608] Length = 388 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 119/375 (31%), Positives = 199/375 (53%), Gaps = 14/375 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++++L +NL + + AGV+++LA K +A W F +Y+ TT+SSLYE Sbjct: 14 PMYILEEKRLRDNLKLIARVAEEAGVEIILAFKAYALWRTFPIFREYIRATTASSLYEAR 73 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--GLRI 122 LG E+FG TH ++ Y D EID + ++FN+++Q ++ +A+ ++++ GLR+ Sbjct: 74 LGFEEFGAPTHTFSPGYTDYEIDEIARCSSHLVFNSLTQYERYHVRARMGNERLSLGLRV 133 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S + ++ +P P +R G + + +V+G H +CE+ S F L I Sbjct: 134 NPEYSEVETLIYNPCAPGTRFGITSEKLPDRLPDDVDGFHVHCHCESGS-DVFERTLTRI 192 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E F + Q++WI+ GGG T KDY V+ + L+ F E+Y ++ LEPG A T Sbjct: 193 EGRFARWFPQLKWINFGGGHLMTRKDYDVQRLIRTLRGFKERYPWIKVILEPGSAFAWQT 252 Query: 242 TTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYPNT---------GPYTAM 291 L V+D+ E+ + + H+PD L I G +T Sbjct: 253 GPLVAQVVDVVEDHGIKTAILNVSFSCHMPDCLEMPYHPAIRNARLADEDGSARGEHTYR 312 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + SCL+GD G + F+ ++ G+ I FED+ Y + FNGI+ P IA+ +VD + Sbjct: 313 MGANSCLSGDWMGSWTFDHALQTGENIIFEDMLHYTTVKTTMFNGISHPAIALLHVDNEL 372 Query: 352 KAIREFSYNDYYNNL 366 + +RE+SY DY + + Sbjct: 373 EMLREYSYEDYRDRM 387 >gi|328541749|ref|YP_004301858.1| diaminopimelate decarboxylase [polymorphum gilvum SL003B-26A1] gi|326411501|gb|ADZ68564.1| Diaminopimelate decarboxylase [Polymorphum gilvum SL003B-26A1] Length = 424 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 71/393 (18%), Positives = 124/393 (31%), Gaps = 28/393 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLTRHYEVFSSAFEGIPSLVCYAMKANSNQAVLATLARLGAGMDVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + ++ K A+ + D + +L + A + + Sbjct: 85 ELRRARAAGVPADRIMFSGVGKTEAEQALAIDEDILCFNVESEPELVQLSRVATEKGRTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 LRINP V + ++ G + + V GL H + Sbjct: 145 RVSLRINPDVDARTHKKISTGKAENKFGIPWQRARALYAEAGELPGIEVTGLDMHIGSQI 204 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F A ++ ++ IE I LGGG+ ++ +K+ Sbjct: 205 TELEPFDAAFARLGDLVRDLRGDGHHIEHIDLGGGLGIPYVTDNAPPPHPVEYAAVVKKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +K +I EPG I N L T V+ + E + K VIVD+++ + L Sbjct: 265 VDKLGCRIIFEPGRLIAGNAGILVTRVIYVKEGHDKTFVIVDAAMNDLIRPTLYDAYHEV 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P A V G C GD V GD ++ Y + +N Sbjct: 325 RPVRAAPADARRIRADVVGPVCETGDFLAHDRDIPEVGQGDMLAVFSAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY--NNL 366 + + N SY+D + L Sbjct: 385 SRLLIPEVLVNEGEFAVVRPRPSYDDLIGLDRL 417 >gi|197104100|ref|YP_002129477.1| diaminopimelate decarboxylase [Phenylobacterium zucineum HLK1] gi|196477520|gb|ACG77048.1| diaminopimelate decarboxylase [Phenylobacterium zucineum HLK1] Length = 422 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 123/391 (31%), Gaps = 27/391 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSS 58 + TP Y+ L + GVK + A+K + + TL + G Sbjct: 25 VGTPVYVYSSATLERHYTVLRDALVAHGVKDPLIAFAVKANSNVAVLRTLARLGAGADVV 84 Query: 59 SLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL- 114 S EV E ++ K A + I + +L+ AQ+L Sbjct: 85 SEGEVRRALAAGVPPERIVFSGVGKTEAEVAFALQAGVAEINVESEPELDLVDRVAQRLG 144 Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNV-----NGLMFHNN 166 +I +R+NP V + ++ G + + ++ N+ G+ H Sbjct: 145 VRAQIAIRVNPDVQAGGHEKISTGKSENKFGVSFSEAERLYAKASNLAGVRPVGVACHIG 204 Query: 167 CENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLK 219 + + + + ++E + LGGG+ + P + + Sbjct: 205 SQITDLAPMAEAFAKMRGLVERLQREGLRVERLDLGGGLGVPYFNQPEPPSPDDYAAMIA 264 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLYQE 277 E V + EPG I N L V + E + +++D+++ + + Sbjct: 265 ETVGGLDVGLAFEPGRMIAANAGVLIAGVTHVHERPEGRRFLVLDAAMNDLIRPAMYDAY 324 Query: 278 S---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 A V G C GD F P++ GD ++F Y + + Sbjct: 325 HDIRAVRPREGEARPYDVVGPVCETGDTFTRDRALPPLEPGDLVAFMTAGAYGAAMASEY 384 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N + + +Y+D Sbjct: 385 NSRLLVPEVLVKGAEFAVVRPRPTYDDMLAR 415 >gi|288962188|ref|YP_003452483.1| diaminopimelate decarboxylase [Azospirillum sp. B510] gi|288914454|dbj|BAI75939.1| diaminopimelate decarboxylase [Azospirillum sp. B510] Length = 419 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 61/387 (15%), Positives = 125/387 (32%), Gaps = 24/387 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+YL L + + + ALK + + TL G S+ Sbjct: 25 VGTPFYLYSTAALETHYNAYAGAFAGQDAGVCYALKANSNLAVIRTLANLGAGGDVVSVG 84 Query: 62 EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ ++ ++ A+ + I +V +L + A ++ Sbjct: 85 EMKRALAGGIPAGRIVFSGVGKTREDLRIALEAGIHQINVESVPELEALSEVASSMRVEA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCENK- 170 I LR+NP V + ++ G E + + V + + ++ Sbjct: 145 PIALRVNPDVDAKTHAKIATGKKENKFGIDYDHAREIYRRAAAMPGVKPVAIAVHIGSQL 204 Query: 171 ----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223 F + + + I + LGGG+ T K+ + D+ ++ + Sbjct: 205 TDLAPFRAAYERVAALLHQLREDGLDINRLDLGGGLGITYKNEAPPDLADYAAMVRSITG 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282 I LEPG ++V N L + V+ + + + IVD+++ + L + Sbjct: 265 NLGCSITLEPGRSLVGNAGILVSRVIYVKQGLHRRFAIVDAAMNDLIRPSLYDAYHGIVP 324 Query: 283 PNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 V G C +GD F P+ + ++F Y + +N Sbjct: 325 VAEPAADAVQEPYDVVGPVCESGDTFAVQRPLPPLADDELVAFLSAGAYGAVMASTYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + N D + + Sbjct: 385 PLVPEVLVNGDRFAVIRPRPTVEEMLA 411 >gi|260428872|ref|ZP_05782849.1| diaminopimelate decarboxylase [Citreicella sp. SE45] gi|260419495|gb|EEX12748.1| diaminopimelate decarboxylase [Citreicella sp. SE45] Length = 421 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 120/392 (30%), Gaps = 26/392 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ LL + + A+K + + TL G S Sbjct: 25 VGTPVYIYSTATLLRHFRLFDEALDWGPHLVCYAMKAASNQAILKTLAAAGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E GE ++ K + A+ + ++ + A L Sbjct: 85 EYARALAAGVPGERIVFSGVGKTRDEIRTALEGGIRQFNIESEPEMRAISEVASALGVVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 + +R+NP V + ++ G + V G+ H + Sbjct: 145 PVTVRVNPDVDARTHAKIATGKSENKFGIPIAKARQVYAEAAALPGLKVVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F+ + + + +I + LGGG+ D+ + ++ Sbjct: 205 TELDPFALAYRKVAELTEALRADGHEISRLDLGGGLGIPYTRSNEAPPLPVDYGRLIERE 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG I N L + V+ + E +N +I+D+++ + + Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGILVSEVIYVKEGEGRNFLILDAAMNDLIRPAMYDAHHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + G C GD F + ++ G ++F Y + +N Sbjct: 325 IPVVEPEPGCEQEPYDIVGPVCETGDTFAKARLMPELRAGGLVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + D + S+ D N S Sbjct: 385 TRALIPEVLVKDDQFAVIRQRPSFEDIINRDS 416 >gi|288802523|ref|ZP_06407962.1| carboxynorspermidine decarboxylase [Prevotella melaninogenica D18] gi|288335051|gb|EFC73487.1| carboxynorspermidine decarboxylase [Prevotella melaninogenica D18] Length = 388 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 123/375 (32%), Positives = 203/375 (54%), Gaps = 14/375 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++ +L NL+ ++ K A V+++LA K +A W F +Y+ TT+SSL+E Sbjct: 14 PMYVLEETRLRENLNLIAHVAKEADVEIILAFKAYALWRTFPIFREYIKATTASSLFEAR 73 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRI 122 LG E+FG TH ++ Y D EID + ++FN+++Q +F +A+ ++K GLR+ Sbjct: 74 LGFEEFGAPTHTFSPGYTDYEIDDIARCSSHLVFNSLTQYERFHVRAKIENEKLSFGLRV 133 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S + ++ +P P +R G E+ ++++G H +CE+ S F L +I Sbjct: 134 NPEYSEVETLIYNPCAPGTRFGISSDKLPETLPEDIDGFHIHCHCESGS-DVFERTLVHI 192 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E++F + Q++WI+ GGG T KDY VK L+ F ++Y ++ LEPG A T Sbjct: 193 EEKFTKWFPQLKWINFGGGHLMTRKDYDVKRLIHVLRGFRKRYPWLKVILEPGSAFAWQT 252 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT---------GPYTAM 291 L V+DI E+ + ++S H+PD L TI G YT Sbjct: 253 GPLVVQVVDIVEDYGIKTAILNASFTCHMPDCLEMPYHPTIRNAKLVDEDGTAKGEYTYR 312 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + SCL+GD G + F +++G+ I FED+ Y + N FNGI+ P IA+ + D + Sbjct: 313 LGANSCLSGDWMGSWDFGHALEVGENIIFEDMLHYTTVKTNMFNGISHPAIALLHTDNEL 372 Query: 352 KAIREFSYNDYYNNL 366 + +RE++Y DY + + Sbjct: 373 EMLREYTYEDYRDRM 387 >gi|91227179|ref|ZP_01261638.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus 12G01] gi|91188707|gb|EAS74995.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus 12G01] Length = 377 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 167/368 (45%), Positives = 241/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A ++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + IGLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVRDVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP +SY+ LA+P R FSRLG + ++G+MFH NCENK F +L Sbjct: 125 LNPGMSYAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I +FG ++ +++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISDQFGEYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A+I G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASENGEHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F +FE+P++IG R+ D AGY + + NWFNG+ MP++ + +G I+ + EF Y Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSNGDIQKLNEFDY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 SDFKRSLS 372 >gi|119475311|ref|ZP_01615664.1| diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2143] gi|119451514|gb|EAW32747.1| diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2143] Length = 415 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 58/385 (15%), Positives = 114/385 (29%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + L + G S E Sbjct: 26 GTPTYVYSRGYLEQQFLSYQRALAGRQHMICYAVKANSNIAVLNVLARLGAGFDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ A+ + + S+L + A L Sbjct: 86 LERVLAAGGDPAKVVFSGVAKTPAEMRQALEAGIHCFNLESESELGVLQQVAADLGVSAS 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCE-- 168 I +R+NP V + ++ G + + N+ G+ H + Sbjct: 146 ISIRVNPDVDANTHPYISTGLKENKFGIDIDRAPAVYRRARDLSHINIIGVDCHIGSQLV 205 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE---FSEK 224 FL L + + I + LGGG+ D + +++ Sbjct: 206 DTTPFLDALDRLLKLIDTLANDGIHISHLDLGGGLGVCYTDEQPPSPAEYIEKVLTHIGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES----A 279 + + EPG +I N L T V + N + ++D+++ + L Sbjct: 266 RDITLAFEPGRSICANAGVLLTKVEYLKCNPEKNFAVIDAAMNDMIRPALYQAWMDIKAV 325 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 N T + G C GD G+ ++ GD +S Y + +N Sbjct: 326 CPRKNEPTKTWDIVGPVCETGDFLGKDRQL-ELREGDLLSVSSAGAYGFTMSSNYNSRVR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + D Sbjct: 385 AAEVMVDGDDVHLIRARETVADLMQ 409 >gi|157737938|ref|YP_001490622.1| carboxynorspermidine decarboxylase [Arcobacter butzleri RM4018] gi|157699792|gb|ABV67952.1| carboxynorspermidine decarboxylase [Arcobacter butzleri RM4018] Length = 381 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 140/370 (37%), Positives = 215/370 (58%), Gaps = 7/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ +++ L NL ++ A + +LLALK FA FD +Y+ G +S L+ Sbjct: 14 LPSPAYVCEEELLEKNLKLLKRVQDEADISILLALKGFAMHSTFDLCKKYLKGCCASGLH 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E +L E+FG E H Y+ A+KD EID +++ + ++FN+ SQL +FKDKA +G+R Sbjct: 74 EAILAKEEFGKEVHTYSPAFKDEEIDEIVAISNHLVFNSFSQLKRFKDKAYGKVS-LGIR 132 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S + L +P P+SR+G + ES ++ ++G FH CE L+ Sbjct: 133 LNPEYSSVEVDLYNPCAPYSRMGTTKANFDESLLEFLDGFHFHALCEQN-VDALEGALEA 191 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 EK F + +++W++ GGG H T DY V+ + LK+F +Y ++Y+EPGEAI Sbjct: 192 FEKNFSQYFDRLKWVNFGGGHHITRADYDVEGLIKLLKDFKSRYPHLKVYMEPGEAIGWQ 251 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 T L TVLDI N +L I+D+S EAH+PD L A I N PYT G + Sbjct: 252 TGYLVATVLDIVYNGMDLAILDTSAEAHMPDTLAMPYRAMIRNSGLANEKPYTYRFGGNT 311 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CL+GDI G++ F++P+K+GD+I ED+ Y + + FNGI +P+I +KN + + K ++ Sbjct: 312 CLSGDIIGDYSFDEPLKVGDKIILEDMIHYTMVKTTTFNGIKLPSIVIKNKENSYKIVKN 371 Query: 357 FSYNDYYNNL 366 F YNDY L Sbjct: 372 FGYNDYKMRL 381 >gi|54310576|ref|YP_131596.1| putative diaminopimelate decarboxylase [Photobacterium profundum SS9] gi|46915019|emb|CAG21794.1| putative diaminopimelate decarboxylase [Photobacterium profundum SS9] Length = 416 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 114/383 (29%), Gaps = 24/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWNAFDQAVIDHPHLICYAVKANSNIGVLNVLARLGSGFDIVSQGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + ++ K A+ + +L + A + L Sbjct: 87 LERVITAGGDPAKVVFSGVGKTAVEMKRALELGIKCFNVESEPELERLNQVASELGLVAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G + +E NV G+ H + Sbjct: 147 ISLRINPDVDAQTHPYISTGLRDNKFGIFFERAVEVYRLAHSLPNLNVVGMDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 + F + I+ + +GGG+ T + P + L E Sbjct: 207 NIDPFIDATDRLLALIDTLKAEGIVIKHLDVGGGLGVTYNEEQPPLPSEYASALLARLGE 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + IVD+++ + L Sbjct: 267 HSDLELIFEPGRAIAANAGVLLTRVEFLKHTDYKNFAIVDAAMNDLIRPTLYQAWQNIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + T + G C GD G+ + GD ++ Y + +N Sbjct: 327 VVPREGEAKTYDLVGPICETGDFIGKDRELC-LAPGDLLAVRSAGAYGFVMSSNYNTRTR 385 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 + + + + Sbjct: 386 AAEIMVDGNTAHVVREREKLAEL 408 >gi|296271966|ref|YP_003654597.1| diaminopimelate decarboxylase [Arcobacter nitrofigilis DSM 7299] gi|296096141|gb|ADG92091.1| diaminopimelate decarboxylase [Arcobacter nitrofigilis DSM 7299] Length = 402 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 123/383 (32%), Gaps = 21/383 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTPYY+ D + + + + + A+K + + L G S+ E Sbjct: 13 KTPYYVYDFDHITSQYNELKDAFRARKSLVAYAVKANSNLSVIKHLANLGAGADCVSIGE 72 Query: 63 VMLGHE-KFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119 V + ++ D EI LS I + ++LN+ + A++L K Sbjct: 73 VRRALKVGIAPYKIIFSGVGKIDAEIREALSLDILMINVESDAELNRVEMIAKELDKIAR 132 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 + R+NP++ ++ G I+ G+ H + Sbjct: 133 ISIRVNPNIDPQTHPYISTGLHENKFGVDIDTAKRMYIQCKNSDNLDPVGIHLHIGSQLT 192 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 +K + + ++ ++ +GGG+ + ++ Q + E Sbjct: 193 QLDPIKESVKIVADLVRNLKAIKIELSFMDIGGGLGIVYDNEKLIDTNEYAQSVLETMFG 252 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL--YQESATI 281 + + EPG +V N T VL K VIVD ++ + L + I Sbjct: 253 LDITVVCEPGRFMVGNAGIFITKVLYEKVNGNKRFVIVDGAMNDLIRPALYNAQHKIEVI 312 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 ++ + G C +GD F + + D ++ Y + +N Sbjct: 313 DKSSDISDCNLVGPICESGDFFAKNIELPKTEHNDLVAIYSAGAYCFTMASNYNTRGRVA 372 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + ++ D Sbjct: 373 EIAVENGKDRLIRKRETFEDIIA 395 >gi|148252717|ref|YP_001237302.1| diaminopimelate decarboxylase [Bradyrhizobium sp. BTAi1] gi|146404890|gb|ABQ33396.1| diaminopimelate decarboxylase [Bradyrhizobium sp. BTAi1] Length = 421 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 108/390 (27%), Gaps = 28/390 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + V + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHYRVFAEAFTGQDVLICYAMKANSNQSVLRTLAKLGAGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ K D + + +L+ A + Sbjct: 85 ELKRALAAGIPARKIVFSGVGKTEAELRAALAADIHCLNIESEPELDLLARLANETGHTA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169 + R+NP V + ++ G + + + V G+ H + Sbjct: 145 RISVRVNPDVDAGTHAKISTGKSENKFGIPLEHARKVYARAAKMKGIEVTGVDVHIGSQI 204 Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 + I + GGG+ + +K Sbjct: 205 TDLGPMETAFRILAEFVQTLRADGHTISHVDFGGGLGIPYHMDRAVPPEPAAYAAMVKRV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 S + EPG IV N L V+ + KN VI+D+++ + LY+ Sbjct: 265 SHNLGCTLMFEPGRMIVGNAGILVAKVIYVKHGEAKNFVIIDAAMNDLIRPT-LYEAHHD 323 Query: 281 IYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I P P A V G C +GD + GD ++ Y + + Sbjct: 324 ILPVIQPAPNAPAFVADVVGPVCESGDYLALDRTLPEPRPGDLLAIMTSGAYGAVQACTY 383 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D + Sbjct: 384 NTRALVPEVLVKGDQSAVIRPRIEVEQLIA 413 >gi|194100049|ref|YP_002003189.1| LysA [Neisseria gonorrhoeae NCCP11945] gi|193935339|gb|ACF31163.1| LysA [Neisseria gonorrhoeae NCCP11945] Length = 406 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTGAFENYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKIAARLGKTAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ KD + + + +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDEGVPDLGAYARAVQKLMGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T P TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKNIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLDLRSAGAYGASMASNYNTRNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + G R + N Sbjct: 377 AEVLVDGGGYKLIRRRETLEQQMAN 401 >gi|288799949|ref|ZP_06405408.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 299 str. F0039] gi|288333197|gb|EFC71676.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 299 str. F0039] Length = 390 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 125/380 (32%), Positives = 196/380 (51%), Gaps = 16/380 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IK P Y++++Q L NL + + A V+++LA K +A W F +Y++ TT+SSL Sbjct: 11 IKEPTYILEEQLLRRNLTLISNVAQKADVEIILAFKAYALWKTFPIFKEYINATTASSLS 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIG 119 E LG+++FG TH ++ AY D EID + S + FN++SQ +F +A + IG Sbjct: 71 EAKLGYQEFGSLTHTFSPAYIDYEIDEIASCSSHLTFNSLSQYERFSGRAISVQPEISIG 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LR+NP S L +P P +R G + + G H +CE+ S F L Sbjct: 131 LRVNPEYSEVGTDLYNPCAPGTRFGVSADKLPKKLPSLLEGFHCHCHCESGS-DVFVRTL 189 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 K+IE++F + +Q++WI+ GGG T DY V+ L+EF ++Y + LEPG A Sbjct: 190 KHIEEKFSPWFSQLKWINFGGGHLMTRSDYDVELLISTLQEFKKRYPHLHVILEPGSAFA 249 Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP-----------NTG 286 T L V+DI E+ + D S H+PD L + Sbjct: 250 WQTGPLVAHVVDIVEDKGYQTAILDVSFTCHMPDCLEMPYMPVVRNAVIAEEEEAQPEDY 309 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 Y G SCL+GD G++ F+ +++G+ I FED+ Y + N FNGI P+IA+ Sbjct: 310 RYRYRFGGNSCLSGDFMGDWIFDHELQVGENIIFEDMLHYTTVKTNMFNGITHPSIALLK 369 Query: 347 VDGTIKAIREFSYNDYYNNL 366 +G ++ +R+++Y DY N + Sbjct: 370 TNGELEILRKYTYKDYKNRM 389 >gi|312884202|ref|ZP_07743913.1| diaminopimelate decarboxylase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368130|gb|EFP95671.1| diaminopimelate decarboxylase [Vibrio caribbenthicus ATCC BAA-2122] Length = 417 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 57/381 (14%), Positives = 110/381 (28%), Gaps = 24/381 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + + A+K + G+ +TL + G S E Sbjct: 27 GTPLYVYSRATLERHWNAFDSAVGDHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGDPKKVVFSGVGKTRAEMKRALELGIKCFNVESEPELERLNQVAGELGVVAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LRINP V ++ G + + G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFERASTVYDFAQSLPHLSIKGIDCHIGSQLT 206 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + I + +GGG+ P L Sbjct: 207 EIEPFIDATDRLLKLIDDLKTQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLARLDG 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HKELELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQEIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + T + G C GD G+ ++ GD ++ Y + +N Sbjct: 327 VVPRKGETQTYDLVGPICETGDFLGKDRELV-LREGDLLAVRSSGAYGFVMASNYNTRVR 385 Query: 340 PTIAVKNVDGTIKAIREFSYN 360 + + T + Sbjct: 386 SAEVMVDGHKTHLVRQREELE 406 >gi|254507969|ref|ZP_05120097.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus 16] gi|219549077|gb|EED26074.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus 16] Length = 379 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 168/368 (45%), Positives = 244/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 8 LKTPYFMINEDKLIENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + IGLR Sbjct: 68 EVKLGYETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 126 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + ++G+MFH NCENK F +L + Sbjct: 127 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDS 186 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FG ++ +++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 187 ISEQFGEYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 246 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A+I G + ++ SCLA Sbjct: 247 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASENGDHEYVIGSCSCLA 306 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F +FE+P++IG R+ D AGY + + NWFNG+ MP++ + +G I+ + EF Y Sbjct: 307 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSNGDIQKLNEFDY 366 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 367 SDFKRSLS 374 >gi|90414245|ref|ZP_01222225.1| putative diaminopimelate decarboxylase [Photobacterium profundum 3TCK] gi|90324692|gb|EAS41233.1| putative diaminopimelate decarboxylase [Photobacterium profundum 3TCK] Length = 416 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 114/383 (29%), Gaps = 24/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWNAFDQAVTDHPHLICYAVKANSNIGVLNVLARLGSGFDIVSQGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ + +L + A +L Sbjct: 87 LERVITAGGDPAKVVFSGVGKTAVEMKRALELGIKCFNVESEPELERLNQVASELGVIAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G + +E NV G+ H + Sbjct: 147 ISLRINPDVDAQTHPYISTGLRDNKFGIFFERAVEVYRLAHSLPNLNVVGMDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 + F + I+ + +GGG+ T + P + L E Sbjct: 207 NIDPFIDATDRLLALIDTLKAEGIVIKHLDVGGGLGVTYSEEQPPLPSEYATALLARLGE 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + IVD+++ + L Sbjct: 267 HSELELIFEPGRAIAANAGVLLTRVEFLKHTDYKNFAIVDAAMNDLIRPTLYQAWQNIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + T + G C GD G+ + GD ++ Y + +N Sbjct: 327 VVPRKGETKTYDLVGPICETGDFIGKDRELC-LAPGDLLAVRSAGAYGFVMSSNYNTRTR 385 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 + + + + Sbjct: 386 AAEIMVDGNTAHVVREREKLAEL 408 >gi|332977382|gb|EGK14160.1| diaminopimelate decarboxylase [Desmospora sp. 8437] Length = 444 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 66/398 (16%), Positives = 128/398 (32%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + + + + + G ++ A K F+ M + + S Sbjct: 30 GTPLYVMDETMIRRRIRSFVEAFEKTGLSYRMAYASKAFSTLAMCRLVAEEGLHLDVVSD 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K D + A+ + + + ++L A+ ++ Sbjct: 90 GELYTALKAGFPPERIYFHGNNKTLDELVMALDAGIGRFVADNFTELALLDQLARDRGRR 149 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LR P V + S+ G + + SE G H Sbjct: 150 VKVILRTTPGVEAHTHHYIQTGQEDSKFGFDLESGQVHQALKQCLTSEGLEPEGFHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFC------- 215 + F ++ + + ++LGGG + Sbjct: 210 SQIFESDGFRLAVRKMAALAAECRQSLGFRTRILNLGGGFGIRYNEKDQPMPVDHYIAAI 269 Query: 216 --QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + + F+ QI+LEPG +IV T V + E + V VD + + Sbjct: 270 AEEVRQGFAGGELPQIWLEPGRSIVGEAGTTLYRVGTVKEIPGLRKYVAVDGGMNDNPRP 329 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + A T + G+ C +GD+ V GD ++ YN Sbjct: 330 ALYHASYEASLANRAGEEPAETVSIAGKLCESGDMLIWDIPLPRVNTGDLLAVSCTGAYN 389 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + N +N + P + + +R + D N Sbjct: 390 YSMANNYNRLRRPAVVFVRDGEASEVVRRETLEDLIRN 427 >gi|77359070|ref|YP_338645.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis TAC125] gi|76873981|emb|CAI85202.1| putative diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis TAC125] Length = 417 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 63/387 (16%), Positives = 118/387 (30%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + KN + A+K + + + L + G S E Sbjct: 26 GTPCYVYSRATFERHYLAFANATKNHKSLVCYAVKANSNIAVLNILARLGSGFDIVSKGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + ++ K + A +VS+L + + A +L+ Sbjct: 86 LARVIKAGGDASKVVFSGVAKTADEIAYALKLGIKCFNVESVSELERISEVACELNLAAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I +R+NP + ++ G + + N+ G+ H + Sbjct: 146 ISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVSVYQHAASLPGLNIIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F L + E ++ + +GGG+ T +P + Q + Sbjct: 206 ETRPFLEALDKLLTLIDELKACNIELTHLDIGGGLGVTYNDEQPPHPSEYAAQVTERLVN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282 +++ EPG AI N L T V I +N IVD+ + + L I Sbjct: 266 YRHLELIFEPGRAIAANAGVLVTQVEFIKQNQDKYFAIVDAGMNDMLRPALYQAWQKIIP 325 Query: 283 -----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T + + G C GD G+ +K GD + Y + +N Sbjct: 326 VSVRDDETPTHNFDIVGPVCETGDFLGKDRELA-LKQGDLLVQRSAGAYGFTMSSNYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + Y Sbjct: 385 PRVAEIMVDGSQHHLIRERETIESLYQ 411 >gi|28898714|ref|NP_798319.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus RIMD 2210633] gi|260362645|ref|ZP_05775545.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus K5030] gi|260879746|ref|ZP_05892101.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus AN-5034] gi|260898780|ref|ZP_05907221.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus Peru-466] gi|260901593|ref|ZP_05909988.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus AQ4037] gi|28806932|dbj|BAC60203.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus RIMD 2210633] gi|308086612|gb|EFO36307.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus Peru-466] gi|308093399|gb|EFO43094.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus AN-5034] gi|308108689|gb|EFO46229.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus AQ4037] gi|308114223|gb|EFO51763.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus K5030] Length = 377 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 167/368 (45%), Positives = 244/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + IGLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + + ++G+MFH NCENK F +L Sbjct: 125 LNPGVSYAGQDLANPARKFSRLGVQADHIKPEVFEGIDGVMFHMNCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FG ++ +++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISEQFGEYLNKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A+I + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASDNGEHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F +F++P++IG R+ D AGY + + NWFNG+ MP++ + G I+ + EF Y Sbjct: 305 GDQFCVANFDQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSSGEIQKLNEFDY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 SDFKRSLS 372 >gi|117918847|ref|YP_868039.1| diaminopimelate decarboxylase [Shewanella sp. ANA-3] gi|117611179|gb|ABK46633.1| diaminopimelate decarboxylase [Shewanella sp. ANA-3] Length = 414 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 59/382 (15%), Positives = 107/382 (28%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFNNAVADHPHLVCYAVKANSNLAVLNVLARLGSGFDIVSGGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ + ++L + D A +L K Sbjct: 86 LARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNDVAGRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEVVFARAHALPHLQVKGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + + IE +GGG+ T D + L Sbjct: 206 EIQPFLDAMDRMLALIDRLADQGIVIEHFDVGGGLGVTYDDETPPHPDVYAAALLARLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + + K IVD ++ + L Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + G C GD G+ + GD + Y + +N Sbjct: 326 NPRDEQAQVFDIVGPVCETGDFLGKDRALA-IAAGDLLVVRSSGAYGFAMASNYNTRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + D Sbjct: 385 AEVMVDGDKAYLVREREKLAQL 406 >gi|332534419|ref|ZP_08410259.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis ANT/505] gi|332036153|gb|EGI72628.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis ANT/505] Length = 417 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 113/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + KN + A+K + + + L + G S E Sbjct: 26 GTPCYVYSRATFERHYLAFANATKNHKSLVCYAVKANSNIAVLNILARLGSGFDIVSKGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQ--KLHKK 117 + ++ K + A + S+L + + A L Sbjct: 86 LARVIKAGGDASKVVFSGVAKTSDEIAYALKLGIKCFNVESASELERISEVACELNLEAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170 I +R+NP + ++ G + V G+ H + Sbjct: 146 ISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVSVYQQAAALPGLKVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F L + ++ + +GGG+ +P + Q + + Sbjct: 206 QVRPFLEALDKLMALIDELKTNGIELTHLDIGGGLGVPYDNEQPPHPSEYAAQVTERLAN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282 +++ EPG AI N L T V I +N IVD+ + + L I Sbjct: 266 YKHLELIFEPGRAIAANAGILVTQVEFIKQNQDKFFAIVDAGMNDMLRPALYQAWQKIIP 325 Query: 283 -----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T + + G C GD G+ +K GD ++ Y + +N Sbjct: 326 VSVRDDETPTHNFDIVGPVCETGDFLGKDRELA-LKQGDLLAQRSAGAYGFTMSSNYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + Y Sbjct: 385 PRVAEIMVDGQQHHLIRERETIESLYQ 411 >gi|332289594|ref|YP_004420446.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Gallibacterium anatis UMN179] gi|330432490|gb|AEC17549.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Gallibacterium anatis UMN179] Length = 417 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 114/384 (29%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + L + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSALQGHPHLICFAVKSNPNIALLNLLAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K + ++L + A+KL Sbjct: 86 LERVLAAGGEANKVVFSGVAKSHTEIERALEVGIRCFNVESEAELLRINQVAEKLGKKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAKTHPYISTGLKKNKFGVSVERAREVYRLAKTLPHIQIVGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ +++ + LGGG+ +P + L +F + Sbjct: 206 ELQPFLDSADRLLVLLEQLRQDGIELQHLDLGGGLGVRYSDETPPHPTEYASALLAKFKQ 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L T V + N IVD+ + + L I Sbjct: 266 YPELEIILEPGRAISANAGILVTKVEYLKSNEDFNFAIVDAGMNDMIRPALYQAYMEIIE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I Y + + +N Sbjct: 326 ADRTLDRERKVYDVVGPICETSDFLGKGRSLA-IAAGDFIVQRSAGAYGASMASNYNSHP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D R + + Sbjct: 385 RAAEVLVDGDKAHLIKRRERFEEL 408 >gi|262172884|ref|ZP_06040562.1| diaminopimelate decarboxylase [Vibrio mimicus MB-451] gi|261893960|gb|EEY39946.1| diaminopimelate decarboxylase [Vibrio mimicus MB-451] Length = 417 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 111/380 (29%), Gaps = 24/380 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S+ E Sbjct: 27 GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ + +L++ A +L Sbjct: 87 LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESERELHRLNKVAAELGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G E +V+G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAEVYRLAHSLPHLDVHGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F + I + +GGG+ +D + K ++ Sbjct: 207 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 266 Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279 EPG AI N L T V + I+D+++ + L Sbjct: 267 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C D G+ ++ GD ++ Y + +N Sbjct: 327 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LEEGDLLAVRSSGAYGFTMSSNYNSRPR 385 Query: 340 PTIAVKNVDGTIKAIREFSY 359 + + + + + Sbjct: 386 VAEVMVDGNKAHLVRQRETL 405 >gi|258622843|ref|ZP_05717860.1| diaminopimelate decarboxylase [Vibrio mimicus VM573] gi|258584904|gb|EEW09636.1| diaminopimelate decarboxylase [Vibrio mimicus VM573] Length = 439 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 111/380 (29%), Gaps = 24/380 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S+ E Sbjct: 49 GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 108 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ + +L++ A +L Sbjct: 109 LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESERELHRLNKVAAELGVKAP 168 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G E +V+G+ H + Sbjct: 169 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAEVYRLAHSLSHLDVHGIDCHIGSQLT 228 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F + I + +GGG+ +D + K ++ Sbjct: 229 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 288 Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279 EPG AI N L T V + I+D+++ + L Sbjct: 289 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 348 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C D G+ ++ GD ++ Y + +N Sbjct: 349 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LEEGDLLAVRSSGAYGFTMSSNYNSRPR 407 Query: 340 PTIAVKNVDGTIKAIREFSY 359 + + + + + Sbjct: 408 VAEVMVDGNKAHLVRQRETL 427 >gi|119503712|ref|ZP_01625794.1| putative diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2080] gi|119460220|gb|EAW41313.1| putative diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2080] Length = 418 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 58/380 (15%), Positives = 112/380 (29%), Gaps = 23/380 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A+K + + L + G SL E Sbjct: 26 GTPLYVYSRACIEQAYLAYQTALADHDHLICYAVKANSNLAILSVLAKLGAGFDIVSLGE 85 Query: 63 V-MLGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + + ++ K A+ + S+L + AQ + Sbjct: 86 LERVIAAGGDPTKVVFSGVCKTHAAIKRALEVGIHCFNVESESELEALSEVAQASGMVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCENK 170 I LR+NP V ++ G + + K V G+ H + Sbjct: 146 ISLRVNPDVDAQTHPYIATGLKDNKFGVELDSALRLYRKAVALPGIKPIGIDCHIGSQIL 205 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224 FS + ++ + +E I LGGG+ + + + Sbjct: 206 DIAPFSEAMDHLIDVLENLKSEGIMLEHIDLGGGLGIPYGNENAPKIADYVAALTQGLSD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES---AT 280 +S+ + LEPG +IV L T V+ + VD+++ + L Sbjct: 266 HSLTLILEPGRSIVAEAGVLLTEVMYLKPTPHKNFALVDAAMNDLLRPALYGAWQDIVPL 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 N + G C GD G+ + GD ++ Y + +N Sbjct: 326 NNRNGDAKCWDIVGPVCETGDFLGKDRNLS-LTEGDVLAVMTAGAYGFVMASNYNTRPRS 384 Query: 341 TIAVKNVDGTIKAIREFSYN 360 + + + Sbjct: 385 AEVMVDGSHSHLIRAREPLE 404 >gi|118602155|ref|YP_903370.1| diaminopimelate decarboxylase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567094|gb|ABL01899.1| diaminopimelate decarboxylase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 415 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 125/386 (32%), Gaps = 24/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 ++P Y+ + + NN + A+K + + + L++ G S+ E Sbjct: 25 ESPLYVYSRTDIENNWYEFDQAFGTHPHLVCYAVKANSNLAVLNVLSKIGSGFDIVSIGE 84 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ +++++N+ + A+ + + Sbjct: 85 LERVLFAGADASRCVFSGVAKTKFEIKRALEVGIFCFNVESMAEMNRIEQVAKDMGTQAQ 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 I LRINP+V ++ G D + S V GL H + Sbjct: 145 ISLRINPNVDAKTHPYISTGLKENKFGVDIDDVVPIYRMAHNSPYLAVKGLNCHIGSQLV 204 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 F L + + + +I + LGGGI + + + + + + Sbjct: 205 EVSPFLDALDKVLELVAKLDKINIRITHLDLGGGIGIKYNNEQIIDINAYIASILDKVKM 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYP 283 ++I LEPG A+V N T V + +N I+D ++ + + Sbjct: 265 NDLKIILEPGRAVVGNAGVFVTKVEFLKQNSDKSFAIIDGAMNDLLRPAFYQTYHQVLPV 324 Query: 284 NTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 N + G C GD + + GD ++ Y + +N Sbjct: 325 NENAKGVDANWDLVGPICETGDFLAKNRKLS-LSEGDYLALMSTGAYGFTMSSNYNSRPR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + + D +N Sbjct: 384 VAEVMVSGNQHTLVRERETIQDLFNK 409 >gi|71064779|ref|YP_263506.1| diaminopimelate decarboxylase [Psychrobacter arcticus 273-4] gi|71037764|gb|AAZ18072.1| diaminopimelate decarboxylase [Psychrobacter arcticus 273-4] Length = 443 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 73/385 (18%), Positives = 120/385 (31%), Gaps = 28/385 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ KQ +L + ++ A+K + + L Q G S E Sbjct: 49 GTPCYVYSKQAILAVYQAYTDSFASLNHQICYAVKANSNLAVLGVLAQAGAGFDIVSRGE 108 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC--DTIIFNTVSQLNKFKDKAQKLHK--K 117 +M ++ K N ++S+L D A+ L K Sbjct: 109 LMRVLAAGGEASRVVFSGVGKTYSDIEYALNQSIGCFNVESISELTLINDVAKALDKSAP 168 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G +D + N+ G+ H + Sbjct: 169 ISLRVNPDVDAKTHPYISTGLKDNKFGIAHEDALVVYQQAAKLSHINIVGIDCHIGSQLT 228 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 F A L + G ++ I LGGG+ D +F L K Sbjct: 229 EVEPFVAALDKVIELVHSLGKVGIELRHIDLGGGLGVRYIDETPVSIDEFANALLPKLSK 288 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281 + ++ EPG +IV N L T V + IVD+++ + L E A I Sbjct: 289 LGLTVFFEPGRSIVANAGILLTQVDVLKPTEHKNFAIVDAAMNDLIRPALYQAEMAVIPS 348 Query: 282 ------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 G + G C GD + + GD ++ Y + +N Sbjct: 349 ALPNNGIDTEGTQPWDIVGAICETGDFLAKDRLLS-LATGDVLAITGAGAYGFTMSSNYN 407 Query: 336 GINMPTIAVKNVDGTIKAIREFSYN 360 + + D + S Sbjct: 408 SRPRASEVMVADDRHQLIRKRESIE 432 >gi|157377262|ref|YP_001475862.1| diaminopimelate decarboxylase [Shewanella sediminis HAW-EB3] gi|157319636|gb|ABV38734.1| diaminopimelate decarboxylase [Shewanella sediminis HAW-EB3] Length = 414 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 58/382 (15%), Positives = 110/382 (28%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + N + A+K + + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFDRAVANHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + + + ++ K + N + ++L + A +L K Sbjct: 86 LSRVIEAGGSPDKVVFSGVGKTVAEMEMALNLGIHCFNVESAAELEQLNLVAVQLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEAIFARANSLPGLEVKGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + + IE +GGG+ T D + L E Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGINIEHFDVGGGLGVTYDDETPPQPDVYAAALLERLGG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + + K+ +VD ++ + L Sbjct: 266 RDLKLIFEPGRAIAANAGIFVTQVLYLKGNSDKHFALVDGAMNDLIRPSLYSAWQNIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD G+ + GD ++ Y + +N Sbjct: 326 KPREGETRNYDIVGPVCETGDFLGKDREL-NLDAGDFLAVRSSGAYGFTMSSNYNSRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + + Sbjct: 385 AEIMVDGSRAHLIREREKLSQL 406 >gi|24375791|ref|NP_719834.1| diaminopimelate decarboxylase [Shewanella oneidensis MR-1] gi|24350739|gb|AAN57278.1|AE015863_7 diaminopimelate decarboxylase [Shewanella oneidensis MR-1] Length = 414 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 107/377 (28%), Gaps = 23/377 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFNNAVAGHPHLVCYAVKANSNLAVLNVLARLGSGFDIVSGGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ + ++L + A +L K Sbjct: 86 LARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNLVAGRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEAVFARAHALPHLQVKGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + + IE +GGG+ T D + L + Sbjct: 206 EIQPFLDAMDRMLSLIDRLAEQGIVIEHFDVGGGLGVTYDDETPPHPDVYAAALLKRLGH 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + + K IVD ++ + L Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTEVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQKIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + + G C GD G+ + GD + Y + +N Sbjct: 326 TPRDDQAHVFDIVGPVCETGDFLGKDREFA-IAPGDLLVVRSSGAYGFAMASNYNTRPRA 384 Query: 341 TIAVKNVDGTIKAIREF 357 + + D Sbjct: 385 AEVMVDGDKAYLVRERE 401 >gi|296332270|ref|ZP_06874732.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674971|ref|YP_003866643.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150584|gb|EFG91471.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413215|gb|ADM38334.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. spizizenii str. W23] Length = 439 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 129/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + AG ++ A K F++ M + S Sbjct: 30 GTPLYVYDVALIRERAKSFKQAFITAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVSG 89 Query: 61 YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F E ++ ++ A+ I+ + +++ +D ++ Sbjct: 90 GELYTAVAAGFPAERIHFHGNNKGREELRMALEHRIGCIVVDNFYEISLLEDLCEETGHS 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G + ++SE + G+ H Sbjct: 150 IDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC------- 215 + F + I K+ + + ++LGGG + Sbjct: 210 SQIFDTAGFVLAAEKIFKKLDEWRESYSFVSKVLNLGGGFGIRYTEDDEPLHATEYVEKI 269 Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +KE + +Y I ++EPG ++V + T TV E V + ++ Sbjct: 270 IEAVKENAARYGFNIPEIWIEPGRSLVGDAGTTLYTVGSQKEVPGVRQYVAVDGGMNDNI 329 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A T + G+ C +GD+ VK GD ++ Sbjct: 330 RPALYQAKYEAATANRIGEAHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + ++ +Y D Sbjct: 390 YGYSMANNYNRIPRPAVVFVENGEDHLVVKRETYEDIVK 428 >gi|86148171|ref|ZP_01066469.1| diaminopimelate decarboxylase [Vibrio sp. MED222] gi|218710945|ref|YP_002418566.1| diaminopimelate decarboxylase [Vibrio splendidus LGP32] gi|85834018|gb|EAQ52178.1| diaminopimelate decarboxylase [Vibrio sp. MED222] gi|218323964|emb|CAV20326.1| Diaminopimelate decarboxylase [Vibrio splendidus LGP32] Length = 417 Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 112/378 (29%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S E Sbjct: 27 GTPLYVYSRATLERHWNAFDSSVGEHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ N + +L + A +L Sbjct: 87 LERVVAAGGDPAKVVFSGVGKTAAEMKRALELNIKCFNVESEPELERLNKVAGELGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LRINP V + ++ G ++G+ H + Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYAFAKTLDNLSIHGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + I+ + +GGG+ P L Sbjct: 207 DIEPFIDATDRLLALIDQLRANDINIKHLDVGGGLGVVYRDELPPQPSDYAKALLARLDN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HSDLELIFEPGRAIAANAGVLLTKVEFLKPTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C GD G+ ++ GD ++ Y + +N + Sbjct: 327 VSPRQGEAVTYDLVGPICETGDFLGKDRDLV-LEEGDLLAVRSAGAYGFAMSSNYNTRSR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + D T + Sbjct: 386 AAEVMVDGDKTHLVRQRE 403 >gi|262393874|ref|YP_003285728.1| carboxynorspermidine decarboxylase putative [Vibrio sp. Ex25] gi|262337468|gb|ACY51263.1| carboxynorspermidine decarboxylase putative [Vibrio sp. Ex25] Length = 377 Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats. Identities = 168/368 (45%), Positives = 242/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A ++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + IGLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVRDVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + ++G+MFH NCENK F +L Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FG ++ +++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISEQFGEYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A+I G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASENGEHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F +FE+P++IG R+ D AGY + + NWFNG+ MP++ + +G I+ + EF Y Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSNGDIQKLNEFDY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 SDFKRSLS 372 >gi|293602585|ref|ZP_06685029.1| diaminopimelate decarboxylase [Achromobacter piechaudii ATCC 43553] gi|292819012|gb|EFF78049.1| diaminopimelate decarboxylase [Achromobacter piechaudii ATCC 43553] Length = 429 Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 122/388 (31%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + L +T V + +K + + + G S Sbjct: 38 LGTPLYVYSRAALKAAWETYRSAIGPLPVLVCYGMKANSNLAVLKEFVRLGAGFDIVSGG 97 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ ++ K DA+ + + +L + D A + Sbjct: 98 ELKRALAVGADPAKIVFSGVGKQVWEMRDALAAGVKCFNVESEGELRRLSDVAQEMGMRA 157 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + LR+NP V+ ++ G + + + + G+ H + Sbjct: 158 PVSLRVNPDVNAQTHPYISTGLKENKFGIAIESALGVYLTAQALPGVEIVGVDCHIGSQL 217 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 + L+ ++ + +I + LGGG+ D L E+ Sbjct: 218 TDISPYFDALEKLLDLIGQLDQAGIRIAHLDLGGGLGIRYTDETPPSPKALLDRVFERLN 277 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES- 278 + + LEPG ++V N L TTV + + +N IVD+++ + L Sbjct: 278 ARGQGHLHLILEPGRSLVGNAGVLLTTVQYLKHADARNFAIVDAAMNDLLRPALYDAYHG 337 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + G C + D + ++ GD ++ E Y++ + +N Sbjct: 338 VQPLRPRAGDLVEYDIVGPVCESADWLAKGRALA-IQQGDVLAVESAGAYSMAMASNYNT 396 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +D Sbjct: 397 RARAAEVMVDGSNYHVVRQRETLDDLLR 424 >gi|149191481|ref|ZP_01869730.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] gi|148834669|gb|EDL51657.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] Length = 417 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 58/381 (15%), Positives = 108/381 (28%), Gaps = 24/381 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + + A+K + G+ +TL + G S E Sbjct: 27 GTPLYVYSRATLERHWNAFDKSVGDHPHLVCYAVKANSNIGVLNTLARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + ++ K A+ + +L + A + Sbjct: 87 LERVVAAGGEPSKVVFSGVGKTAQEMRRALELGIKCFNVESEPELERLNQVAGEMGVVAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V + ++ G V+G+ H + Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYKFAQSLPNLAVHGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + + I+ + +GGG+ +D K + Sbjct: 207 DIEPFIDATDRLLALIDQLRADGVNIKHLDVGGGLGVVYRDELPPQPSDYAKALLARLEN 266 Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279 EPG AI N L T V + IVD+++ + L Sbjct: 267 HPELELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIVDAAMNDLMRPALYQAWQDIIP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C GD G+ ++ D ++ Y + +N Sbjct: 327 VSPREGEAITYDLVGPICETGDFIGKDRSLV-LEQNDLLAVRSAGAYGFVMSSNYNTRPR 385 Query: 340 PTIAVKNVDGTIKAIREFSYN 360 + + D + S Sbjct: 386 VAEIIVDGDKAHVVRQRESLQ 406 >gi|269967062|ref|ZP_06181130.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus 40B] gi|269828321|gb|EEZ82587.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus 40B] Length = 377 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 168/368 (45%), Positives = 241/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A ++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + IGLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVRDVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + ++G+MFH NCENK F +L Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I +FG ++ +++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISAQFGEYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A+I G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASENGEHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F +FE+P++IG R+ D AGY + + NWFNG+ MP++ + +G I+ + EF Y Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSNGDIQKLNEFDY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 SDFKRSLS 372 >gi|281425169|ref|ZP_06256082.1| carboxynorspermidine decarboxylase [Prevotella oris F0302] gi|281400635|gb|EFB31466.1| carboxynorspermidine decarboxylase [Prevotella oris F0302] Length = 388 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 112/374 (29%), Positives = 191/374 (51%), Gaps = 13/374 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++ +L NL+ + + A V+++LA K +A W F +Y+ TT+SSL E Sbjct: 15 PIYILEEARLRRNLNLIANVAREADVEIILAFKAYALWKTFPIFREYIHATTASSLSEAR 74 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRI 122 L E+FG + H ++ AY D EID + + FN+++Q ++ ++ + GLR+ Sbjct: 75 LALEEFGSKAHTFSPAYTDDEIDEIARCSSHLQFNSLTQYARYHERVRKVNPTISYGLRV 134 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S L +P P +R G E ++ G H +CE+ F LK+I Sbjct: 135 NPEYSEVGTDLYNPCAPGTRFGISADKMPEMLPDDIEGFHCHCHCESG-ADVFERTLKHI 193 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E +F + +Q++WI+ GGG T DY L++F +Y ++ LEPG A T Sbjct: 194 ENKFSRWFSQLKWINFGGGHLMTRHDYDTLLLVDTLQKFHMRYPWLKVILEPGSAFAWQT 253 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT--------GPYTAMV 292 L + V+D+ E+ + + S H+PD L + + + PY + Sbjct: 254 GPLVSQVVDVVEDHGIKTAILNVSFTCHMPDCLEMPYNPVVRGSEYIEADDKSSPYIYRL 313 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G SCL+GD G + F+ +++G+ + FED+ Y + N FNGI+ P I + +DGT++ Sbjct: 314 GGNSCLSGDFMGYWKFDHALQVGENVIFEDMLHYTTVKTNMFNGISHPAIGLAKLDGTLE 373 Query: 353 AIREFSYNDYYNNL 366 +R++ Y DY + + Sbjct: 374 VLRKYGYEDYRDRM 387 >gi|255321868|ref|ZP_05363018.1| diaminopimelate decarboxylase [Campylobacter showae RM3277] gi|255300972|gb|EET80239.1| diaminopimelate decarboxylase [Campylobacter showae RM3277] Length = 413 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 65/396 (16%), Positives = 117/396 (29%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + + + + A+K + + L G S+ E Sbjct: 11 GTPLYVYDFDYIAHRYEALKNAFHARKSLVCYAVKANSNLSVLKFLAGLGAGFDCVSVGE 70 Query: 63 VMLGHEKFGGE--THAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119 V V +D E+ L N I + +++N+ + A++L K Sbjct: 71 VKRALLAGAKNYQIILSGVGKRDDELKFALENEILMINLESEAEMNRLEAIAKQLGKSAR 130 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 + R+NP + ++ G + S G+ H + Sbjct: 131 ISIRVNPDIDAKTHPYISTGLNENKFGVDLQTAKKMYLHAKNSPHLEPVGIHSHIGSQIT 190 Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 K + I++ +GGGI + + ++ Q + Sbjct: 191 DIKPVIEAAKIVANLTRELKATQIDIKFFDVGGGIGIVYGEESEPDLYEYAQGILANLSG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 V + EPG IV N T+VL K VIVD ++ + L + Sbjct: 251 LDVTVVCEPGRFIVGNAGYFLTSVLYEKFNKEKRFVIVDGAMNDLIRPSLYQAKHKIFAL 310 Query: 284 NTGP---------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 ++G V G C +GD + P+ GD + + Y Sbjct: 311 SSGKTLCECKKEQLWELKFSPCDVVGPICESGDFLAKDRNLPPLNPGDLVVIKSAGAYGF 370 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N R S+ D Sbjct: 371 AMSSNYNTRGRAAEVAVKGGEDFLVRRRESFEDVVA 406 >gi|225076892|ref|ZP_03720091.1| hypothetical protein NEIFLAOT_01943 [Neisseria flavescens NRL30031/H210] gi|224951778|gb|EEG32987.1| hypothetical protein NEIFLAOT_01943 [Neisseria flavescens NRL30031/H210] Length = 406 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 63/385 (16%), Positives = 126/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFATLNPLVCYAVKANGNLSIIKYFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A++L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAERLGKTAS 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIVGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ +D + + + +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDENVPDLGAYARAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGSSMASNYNTRNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + + N Sbjct: 377 AEVLVDGSECKLIRQRETVEQQMAN 401 >gi|118591377|ref|ZP_01548775.1| diaminopimelate decarboxylase [Stappia aggregata IAM 12614] gi|118436049|gb|EAV42692.1| diaminopimelate decarboxylase [Stappia aggregata IAM 12614] Length = 424 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 64/388 (16%), Positives = 114/388 (29%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + + A+K + + TL Q G S Sbjct: 25 VGTPFYCYSTATLTRHYQVFAAAFSDIPSLVCYAMKANSNQAVLKTLAQLGAGMDVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ K A D + +L + A ++ K Sbjct: 85 ELRRARAAGVPASKIVFSGVGKTEAEQAYALQEDILCFNVESEPELRQLSRVASEMGKTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 +RINP V + ++ G + V G+ H + Sbjct: 145 RVSMRINPDVDAKTHAKIATGKAENKFGIPWQRARDVYAEAAALPGIKVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F ++ + I+ + LGGG+ + Q +K+ Sbjct: 205 TELEPFDNAFARLGDLIADLRSQGHTIDHVDLGGGLGIPYITDNNPPPHPDAYAQVVKKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + EPG I N L T V+ + + K VIVD+++ + L Sbjct: 265 VRELDCMVMFEPGRMIAGNAGILVTEVIYVKDGADKKFVIVDAAMNDLIRPTLYEAYHEV 324 Query: 281 IYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 A + G C GD + VK G+ ++ Y + +N Sbjct: 325 RPVREPAEETDRIKADIVGPVCETGDFLAQNRDMPSVKAGEMLAVYSAGAYGAVQSCTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + N D SY D Sbjct: 385 TRLLVPEVLVNADQFAVIRPRTSYEDLL 412 >gi|149192298|ref|ZP_01870508.1| carboxynorspermidine decarboxylase [Vibrio shilonii AK1] gi|148833867|gb|EDL50894.1| carboxynorspermidine decarboxylase [Vibrio shilonii AK1] Length = 377 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 164/368 (44%), Positives = 242/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A ++++ +GVKL+LALKCF+ WG+FD + Y+DG+TSS + Sbjct: 6 LKTPYFMINEDKLVENLEKAKHLKEVSGVKLVLALKCFSTWGVFDIIKPYLDGSTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + IGLR Sbjct: 66 EVKLGYETFGGETHAYSVGYTEDDVREVADICDKMIFNSQSQLAAYRHIVEGKTS-IGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P RP+SRLG + + +++G+MFH NCENK F +L Sbjct: 125 LNPGVSYAGQDLANPARPYSRLGVQADHIDPTIFDSIDGVMFHMNCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG + +++W+S+GGG+ FT Y + L FS+K+ VQ+YLEPGEAI+T T Sbjct: 185 ISERFGTHLDKLDWVSMGGGVFFTWPGYDIDKLGAALSAFSKKHGVQLYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCLA 299 T L TV+DI EN K IV+S+ EAH D L+Y E A+I + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENEKKTAIVNSATEAHRLDTLIYDEPASILEANSEGDHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F E F++P+++G R+ D AGY + + NWFNG+ MP+I + G I+ + EF Y Sbjct: 305 GDQFCEAKFDEPLEVGQRLHIMDSAGYTMVKLNWFNGLKMPSIYCERSSGQIEKLNEFGY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 DDFKCSLS 372 >gi|82523967|emb|CAI78778.1| diaminopimelate decarboxylase [uncultured epsilon proteobacterium] Length = 403 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 54/384 (14%), Positives = 116/384 (30%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP Y+ D + + K + A+K + + G S+ E Sbjct: 12 KTPLYVYDLDYMSAQYNELKAAFKGRKSIMAYAVKANSNLSVVKHFADLGSGADCVSIGE 71 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 V ++ K + D I + ++L + + A++L+ Sbjct: 72 VRRAFLAGIPSYKIIFSGVGKSDDEIREAIEKDILYINVESEAELGRVELIAKELNCTCR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + R+NP++ ++ G I + G+ FH + Sbjct: 132 ISIRVNPNIDPKTHPYISTGLHDNKFGVDLSSAKRMYIFAKNSENLDPVGIHFHIGSQLT 191 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + + + + ++++ +GGG+ D D+ Q + + Sbjct: 192 QLKPIYESAEIVADLVRSLQNIKIELKFFDIGGGLGVKYDDEVTINPYDYAQAILGTLKG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280 + + EPG + N T VL K V+VD ++ + L A Sbjct: 252 LDLTVVCEPGRFLTANAGYFLTKVLYEKQNGDKKFVVVDGAMNDLLRPALYGAYHKIEAI 311 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + G C +GD F + + ++ D + Y + +N Sbjct: 312 TDNASEMQKVDIVGPVCESGDFFAKDYMLPKLEHNDLLVIHSAGSYGFGMGSNYNTRGRS 371 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + +++D Sbjct: 372 AEVALKNGTAKVIRKRETFDDLVA 395 >gi|119469651|ref|ZP_01612520.1| putative diaminopimelate decarboxylase [Alteromonadales bacterium TW-7] gi|119446898|gb|EAW28169.1| putative diaminopimelate decarboxylase [Alteromonadales bacterium TW-7] Length = 417 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 117/387 (30%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + KN + A+K + + + L + G S E Sbjct: 26 GTPCYVYSRATFERHYLAFANATKNHKSLVCYAVKANSNIAVLNILARLGSGFDIVSKGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + ++ K + A + S+L + + A +L+ Sbjct: 86 LARVIKAGGDAGKVVFSGVAKTADEIAYALKLGIKCFNVESASELERISEVACELNLVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170 I +R+NP + ++ G + NV G+ H + Sbjct: 146 ISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVSVYQQAAALPGLNVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F L + E ++ + +GGG+ + + ++ + + Sbjct: 206 EVKPFLEALDKLLALIDELKSVGIELSHLDIGGGLGVPYDNEQPPHPSEYAEQVTARLEN 265 Query: 228 QIYL----EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +L EPG AI N L T V I +N + + + LYQ I P Sbjct: 266 YRHLELIFEPGRAIAANAGVLITQVEFIKQNQSKFFAIVDAGMNDMLRPSLYQAWQKIIP 325 Query: 284 NT------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + + G C GD G+ +K GD ++ Y + +N Sbjct: 326 VSVRDDDTPTHNFDIVGPVCETGDFLGKDRELA-LKQGDLLAQRSAGAYGFTMSSNYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + Y Sbjct: 385 PRVAEIMVDGEQHHLIRERETIESLYQ 411 >gi|310815091|ref|YP_003963055.1| diaminopimelate decarboxylase [Ketogulonicigenium vulgare Y25] gi|308753826|gb|ADO41755.1| diaminopimelate decarboxylase [Ketogulonicigenium vulgare Y25] Length = 419 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 64/388 (16%), Positives = 118/388 (30%), Gaps = 24/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ L + + A+K + + TL G S+ Sbjct: 25 VGTPVYIYSTATLKRHFQLFDDALAGMPHLVCFAVKANSNVAVLKTLGDLGAGMDVVSVG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HK 116 E + GE ++ K E + +L D A +L Sbjct: 85 EYLRAKAAGVPGERIVFSGIGKTREEIRTTLLGGIRQFNVESEPELQAISDIASELGLIA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169 + +R+NP V + ++ G V G+ H + Sbjct: 145 PVAVRVNPDVDAHTHAKIATGKSENKFGIPISRAQAVYAFAASLPGIQVVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F A + + + I + LGGG+ + ++ ++E Sbjct: 205 TDLAPFRAAYQKVAELTEVLRAEGHTISRLDLGGGLGIPYRRDNSAPPLPSEYGAMVRET 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 V+I +EPG I N L + V+ + E + +IVD+++ + + Sbjct: 265 LGHLDVEIEIEPGRLIAGNAGLLVSRVIYVKEGEDRRFLIVDAAMNDLIRPAMYEAHHDI 324 Query: 281 IYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 I + V G C GD F P+ G+ ++F Y + +N Sbjct: 325 IPVDESLAPSTVYDVVGPVCETGDTFARGRAMAPLNAGELVAFRSAGAYGAVMASEYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + N D SY + Sbjct: 385 PLVPEVLVNGDQFAVIRPRPSYEEMIAR 412 >gi|258625070|ref|ZP_05719989.1| diaminopimelate decarboxylase [Vibrio mimicus VM603] gi|258582621|gb|EEW07451.1| diaminopimelate decarboxylase [Vibrio mimicus VM603] Length = 449 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 111/380 (29%), Gaps = 24/380 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S+ E Sbjct: 49 GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 108 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ + +L++ A +L Sbjct: 109 LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESERELHRLNKVAAELGVKAP 168 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G E +V+G+ H + Sbjct: 169 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAEVYRLAHSLSNLDVHGIDCHIGSQLT 228 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F + I + +GGG+ +D + K ++ Sbjct: 229 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 288 Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279 EPG AI N L T V + I+D+++ + L Sbjct: 289 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 348 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C D G+ ++ GD ++ Y + +N Sbjct: 349 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LEEGDLLAVRSSGAYGFTMSSNYNSRPR 407 Query: 340 PTIAVKNVDGTIKAIREFSY 359 + + + + + Sbjct: 408 VAEVMVDGNKAHLVRQRETL 427 >gi|260768269|ref|ZP_05877203.1| carboxynorspermidine decarboxylase putative [Vibrio furnissii CIP 102972] gi|260616299|gb|EEX41484.1| carboxynorspermidine decarboxylase putative [Vibrio furnissii CIP 102972] Length = 411 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 165/368 (44%), Positives = 243/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A ++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 40 LKTPYFMIDEGKLIANLEIAKRLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 99 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LGH+ FGGETHAY+V Y + ++ V CD +IFN+ SQL+ ++ + +GLR Sbjct: 100 EVKLGHDTFGGETHAYSVGYSEDDVKEVADICDKMIFNSQSQLSAYRHLVEGKA-SLGLR 158 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + + + +NG+MFH NCENK F +L + Sbjct: 159 LNPGVSYAGQDLANPARQFSRLGVQADHIDPAVFETINGVMFHMNCENKDVDAFINLLDS 218 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ ++W+SLGGG+ FT Y V+ LK F+EK+ VQ+YLEPGEA++T T Sbjct: 219 ISERFGAYLNTLDWVSLGGGVFFTWPGYDVEKLGLALKAFAEKHGVQLYLEPGEAVITKT 278 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ +G + ++ SCLA Sbjct: 279 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASESGEHEYVIGSCSCLA 338 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+K+G ++ D AGY + + NWFNG+ MP++ + +G I+ + EF Y Sbjct: 339 GDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGDIQKLNEFGY 398 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 399 DDFKRSLS 406 >gi|37678270|ref|NP_932879.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016] gi|37197009|dbj|BAC92850.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016] Length = 417 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 106/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S E Sbjct: 27 GTPLYVYSRATLERHWHAFDRSVEGHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ N + +L + A +L Sbjct: 87 LERVLAAGGDPRKVVFSGVGKTEAEMRRALELNIKCFNVESEPELERLNRVAGELGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V ++ G NV G+ H + Sbjct: 147 ISLRINPDVDAQTHPYISTGLRDNKFGIAFDRAPAVYQFAQSLANLNVQGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F + + I + +GGG+ ++ + K + Sbjct: 207 AIEPFIDATDRLLALIDDLKEQGINIRHLDVGGGLGVVYRNELPPQPSEYAKALLGRLEN 266 Query: 228 Q----IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 + EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C GD G+ + D ++ Y + +N Sbjct: 327 VQPRQGEAVTYDLVGPICETGDFLGKDRSLV-LAENDLLAVRSAGAYGFVMSSNYNTRAR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + Sbjct: 386 AAEVMVDGKQHYLVRQRE 403 >gi|315179977|gb|ADT86891.1| Diaminopimelate decarboxylase [Vibrio furnissii NCTC 11218] Length = 411 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 165/368 (44%), Positives = 243/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A ++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 40 LKTPYFMIDEGKLIANLEIAKRLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 99 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LGH+ FGGETHAY+V Y + ++ V CD +IFN+ SQL+ ++ + +GLR Sbjct: 100 EVKLGHDTFGGETHAYSVGYSEDDVKEVADICDKMIFNSQSQLSAYRHLVEGKA-SLGLR 158 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + + + +NG+MFH NCENK F +L + Sbjct: 159 LNPGVSYAGQDLANPARQFSRLGVQADHIDPAVFETINGVMFHMNCENKDVDAFINLLDS 218 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ ++W+SLGGG+ FT Y V+ LK F+EK+ VQ+YLEPGEA++T T Sbjct: 219 ISERFGAYLNTLDWVSLGGGVFFTWPGYDVEKLGFALKAFAEKHGVQLYLEPGEAVITKT 278 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ +G + ++ SCLA Sbjct: 279 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASESGEHEYVIGSCSCLA 338 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+K+G ++ D AGY + + NWFNG+ MP++ + +G I+ + EF Y Sbjct: 339 GDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGDIQKLNEFGY 398 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 399 DDFKRSLS 406 >gi|304316110|ref|YP_003851255.1| diaminopimelate decarboxylase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777612|gb|ADL68171.1| diaminopimelate decarboxylase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 445 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 74/400 (18%), Positives = 135/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID+++L N + K G +++ A K F + + + G S Sbjct: 29 GTPLYVIDEEQLRENCRSFYNGFKRNYPGNEVIYASKAFMTTAICKIIEEENLGLDVVSG 88 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F + ++ K D A+ N II + +LN + A K+ Sbjct: 89 GELYTALKADFPVKNIYFHGNNKSADELTMALEYNIGCIIVDNWFELNMLNELAFKMGKK 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I LR++P V + S+ G + K + + N+ GL H Sbjct: 149 PNIYLRVSPGVEAHTHEYIKTGQIDSKFGFPLFNGDALDAIKYALTLDNVNLTGLHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + S+ + A + + ++ + LGGG + + + Sbjct: 209 SQIFSYDSYKAEIDIMMNFLKKVKDHTGWEVGELDLGGGFGIAYVEEDDPQPIELIANEI 268 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 K I +EPG +I+ N T TV I V + ++ Sbjct: 269 MKSVEEYSRNLNIKMPHIIVEPGRSIIGNAGTTLYTVGAIKNIPGVRKYVSVDGGMADNI 328 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N + G+ C +GD+ ++ GD I+ Sbjct: 329 RTALYGAKYNAIVANKARKINLEKVSIAGKCCESGDMLIWDIELPQLESGDIIAVTCTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N + P + N + + +Y D N Sbjct: 389 YNYSMASNYNRLPRPAAVLVNNGESDLIVARETYEDLVRN 428 >gi|254804203|ref|YP_003082424.1| Diaminopimelate decarboxylase [Neisseria meningitidis alpha14] gi|254667745|emb|CBA03656.1| Diaminopimelate decarboxylase [Neisseria meningitidis alpha14] Length = 406 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 63/385 (16%), Positives = 125/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G S E Sbjct: 18 GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G +T V + EI+ A+ + ++ ++++ + A +L Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I +E + LGGG+ ++ + + Q +++ Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQNEKVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + + N Sbjct: 377 AEVLVDGNEYRLIRLRETLEQQMAN 401 >gi|156975017|ref|YP_001445924.1| hypothetical protein VIBHAR_02739 [Vibrio harveyi ATCC BAA-1116] gi|156526611|gb|ABU71697.1| hypothetical protein VIBHAR_02739 [Vibrio harveyi ATCC BAA-1116] Length = 377 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 168/368 (45%), Positives = 241/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A ++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMINEDKLVENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + IGLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + ++G+MFH NCENK F +L + Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDS 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FG ++ +++W+S+GGG+ FT Y + LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISEQFGEYLNKLDWVSMGGGVFFTWPGYDTEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A+I G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASENGEHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F +FE+P++IG R+ D AGY + + NWFNG+ MP++ + G I+ + EF Y Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSSGEIQKLNEFDY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 SDFKRSLS 372 >gi|225175576|ref|ZP_03729570.1| diaminopimelate decarboxylase [Dethiobacter alkaliphilus AHT 1] gi|225168905|gb|EEG77705.1| diaminopimelate decarboxylase [Dethiobacter alkaliphilus AHT 1] Length = 446 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 123/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D++++ N K ++ A K F M ++ S Sbjct: 30 GTPLYVMDEEQIRKNCAEYRDTFKEHYPNSQVAYAGKAFLTKAMCRLVDDEGLALDVVSG 89 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E Y+ K E + + + ++ S+L A + K Sbjct: 90 GEIHTALAAGFPAEKMLYHGNNKTPEEIEMALENGVGRFVVDSYSELELLNALAGEAGKV 149 Query: 118 IGL--RINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 GL RI P V + S+ G D + + + GL H Sbjct: 150 AGLYLRIKPGVEAHTHHYIQTGQVDSKFGMGLADGEAMTAVKMAAKMKHVELKGLHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKD--------F 214 + F + + I + LGGG Sbjct: 210 SQIFDLKPFQMAAAVMVDFMQEIKKKTGTVIGELDLGGGFGIRYTREDSPYSLSGFVELI 269 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K+ +++ + +EPG +I+ TV + E V + ++ Sbjct: 270 AKTVKDKCAEHNYPLPKLLVEPGRSIIGEAGITLYTVGSVKEIPGVRKYVAVDGGMMDNL 329 Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + + + + + G++C +GD+ ++ GD ++ Sbjct: 330 RPAMYEAKYEAVVANRMNDQAEEKVSIAGKACESGDMLIWDIELPKLQRGDLMAVLSTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y+ + N +N P + + SY+D N Sbjct: 390 YHYSMANNYNRFPRPPVVFVKDGQADLVVARESYDDLVQN 429 >gi|145632076|ref|ZP_01787811.1| diaminopimelate decarboxylase [Haemophilus influenzae 3655] gi|144986983|gb|EDJ93513.1| diaminopimelate decarboxylase [Haemophilus influenzae 3655] Length = 415 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L I Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D + R + + Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408 >gi|159795662|pdb|2YXX|A Chain A, Crystal Structure Analysis Of Diaminopimelate Decarboxylate (Lysa) Length = 386 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 62/374 (16%), Positives = 115/374 (30%), Gaps = 15/374 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ L + + + A+K + L + G + E Sbjct: 12 GTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLKILREEGFGXDVVTKGE 71 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIG 119 ++ T +N K + D + ++ + + + Sbjct: 72 LLAAKLAGVPSHTVVWNGNGKSRDQXEHFLREDVRIVNVDSFEEXE-IWRELNPEGVEYF 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLCF 175 +R+NP V + G +D + N+ GL H + F Sbjct: 131 IRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFXERFRSXNIRGLHVHIGSQITRVEPF 190 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPG 234 + + + E I++GGG + R K + K ++ +E G Sbjct: 191 VEAFSKVVRASERYG--FEEINIGGGWGINYSGEELDLSSYREKVVPDLKRFKRVIVEIG 248 Query: 235 EAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLL--YQESATIYPNTGPYTAM 291 IV + L V+ + V+VD + L Y + A Sbjct: 249 RYIVAPSGYLLLRVVLVKRRHNKAFVVVDGGXNVLIRPALYSAYHRIFVLGKQGKEXRAD 308 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 V G C +GD+ V+ GD I+ E+ Y N +N P + +G I Sbjct: 309 VVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYTXSNNYNSTTRPAEVLVRENGRI 368 Query: 352 -KAIREFSYNDYYN 364 R + D + Sbjct: 369 SLIRRRETEXDIFK 382 >gi|297545173|ref|YP_003677475.1| diaminopimelate decarboxylase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842948|gb|ADH61464.1| diaminopimelate decarboxylase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 445 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 71/400 (17%), Positives = 134/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ L N K G +++ A K F + + + G S Sbjct: 29 GTPLYVIDEELLRQNCRAFYNGFKKDYPGNEVIYASKAFMTMAICKIIEEEKLGLDVVSG 88 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-- 115 E+ F E ++ ++ I A+ +N II + +LN D A+K++ Sbjct: 89 GELYTALKAGFPPEKIYFHGNNKSREELIMALENNIGRIIVDNWYELNMLNDLAKKMNKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 I +RI+P V + S+ G + + E N+ GL H Sbjct: 149 PNIYIRISPGVEAHTHQYVKTGQIDSKFGFPLFNGDAIKAIEYALTLENVNLVGLHSHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + A + + ++ + LGGG + +++ Sbjct: 209 SQIFDAESYKAEIDIMMNFLKLLKEFLGWEVGELDLGGGFGIAYVEEDDPQPIEQIASEI 268 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + I +EPG +I+ N T TV I + V + ++ Sbjct: 269 MQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKDIPGVRKYVAVDGGMSDNI 328 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N + G+ C +GD+ ++ GD ++ Sbjct: 329 RTALYGAKYDAIVANKAKNIKSEKVSIAGKLCESGDMLIWDITLPKIEEGDILAVTCTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N + P + + +Y D N Sbjct: 389 YNYSMASNYNRLPRPAAVLVYNGQADIIVARETYEDLIRN 428 >gi|296133144|ref|YP_003640391.1| diaminopimelate decarboxylase [Thermincola sp. JR] gi|296031722|gb|ADG82490.1| diaminopimelate decarboxylase [Thermincola potens JR] Length = 446 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D++ + N +++ A K F A M + + + G S Sbjct: 30 GTPLYVMDEEFIRQNCKAYYESFTGAYPNSEVIYASKAFLAIAMCNIIEEEGLGLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ KF ++ K E + +N + + +++ A Sbjct: 90 GELYTALKAKFPTGRIYFHGNNKSPEEIRMALEANIGRFVVDNTYEMDLLNSIAGEMNKK 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +RI P + + S+ G E K + E + GL H Sbjct: 150 ANILIRITPGIEAHTHEYIQTGQIDSKFGLVLSNGQAMEGIKKALGLENLILKGLHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + + + + +I ++LGGG + Sbjct: 210 SQIFELQSYQHAAEVMMEYIQKVTAETGVEITELNLGGGFGIYYSAGDRPASIKTYATIV 269 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + ++ +EPG +IV T T+ + + V + + Sbjct: 270 METVQRKAREFNINVPKVIVEPGRSIVGAAGTTLYTIGSVKDIPGVRKYVAVDGGMADNP 329 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N + G+ C +GD+ V+ GD ++ Sbjct: 330 RPALYQARYEALVANKADQPKNDEVSIAGKCCESGDMLIWDLAVPEVEPGDILAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N + P + + N +R +Y D N Sbjct: 390 YNYSMASNYNRLTKPAVVLVNRGNAELIVRRETYEDLVQN 429 >gi|269963934|ref|ZP_06178245.1| carboxynorspermidine decarboxylase [Vibrio harveyi 1DA3] gi|269831334|gb|EEZ85482.1| carboxynorspermidine decarboxylase [Vibrio harveyi 1DA3] Length = 377 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 167/368 (45%), Positives = 243/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMINEDKLVENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + IGLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R +SRLG + ++G+MFH NCENK F +L + Sbjct: 125 LNPGVSYAGQDLANPARQYSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDTFIGLLDS 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I +FG ++ +++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISDQFGEYLNKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A+I +G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASESGEHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F +FE+P++IG R+ D AGY + + NWFNG+ MP++ + G I+ + EF Y Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSSGEIQKLNEFDY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 SDFKRSLS 372 >gi|209967337|ref|YP_002300252.1| diaminopimelate decarboxylase [Rhodospirillum centenum SW] gi|209960803|gb|ACJ01440.1| diaminopimelate decarboxylase [Rhodospirillum centenum SW] Length = 436 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 64/395 (16%), Positives = 125/395 (31%), Gaps = 30/395 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG-----VKLLLALKCFAAWGMFDTLNQYMDGTTS 57 TP Y+ +L N G V + ALK + + TL G Sbjct: 31 GTPAYVYSTAELRANWRAYADAFDLDGPGGRDVAVCYALKANSNLAVIRTLTALGAGADV 90 Query: 58 SSLYEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 S+ E+ + ++ +D A+ + I ++ +L+ A L Sbjct: 91 VSVGEMQRALVAGIPADRIVFSGVGKTRDELAAALKAGIHQINVESLPELDLLSAVASGL 150 Query: 115 --HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHN 165 + LR+NP V R + G + + G+ H Sbjct: 151 GLVAPVALRVNPDVDAQTHGKIATGRKEDKFGIDWSQAGAAFARAAALPGLRPLGVAIHI 210 Query: 166 NCENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRL 218 + F+ + + IE I LGGG+ ++ + + Q + Sbjct: 211 GSQLLKTSPFALAFAKVAELVTDLRAHGIGIERIDLGGGVGVPYREEDIGPDHRAYAQVV 270 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQE 277 +E I LEPG ++V + L + V+ + E + +++D+++ + L Sbjct: 271 RETVGHLGCHITLEPGRSLVASAGVLLSRVVHVKEGLHRRFLVLDAAMNDLIRPSLYDAW 330 Query: 278 SATIYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + V G C +GD F + P++ GD ++ Y + Sbjct: 331 HTILPVRQPARGAPLSAMDVVGPVCESGDTFAKGRRLPPMQAGDLVAILTAGAYGAVMAS 390 Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 +N + + R + + S Sbjct: 391 TYNSRPLVPEVLVAGGERAVVRRRPTLEELLAMES 425 >gi|291556836|emb|CBL33953.1| carboxynorspermidine decarboxylase [Eubacterium siraeum V10Sc8a] Length = 392 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 122/383 (31%), Positives = 193/383 (50%), Gaps = 23/383 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ ++ L N + ++ G K+LLA K F+ + + ++ Y+ GTT+S LYE Sbjct: 13 TPCYVTEECYLRRNCEILKSVQDMTGCKILLAQKAFSMYSTYPLISGYLSGTTASGLYEA 72 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 LG+E FG ETH ++ AY D EI+ + +FN++ Q +D + H I + Sbjct: 73 RLGYEYFGNETHVFSPAYTDSEINELAKYAGHFVFNSIRQFALHRDAVKDKHCLIRVNPR 132 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLCFS 176 S + DP P SRLG+ E + ++GL FH CE S Sbjct: 133 FSTQE-GHEIYDPCAPGSRLGQTLASFEEDIKRYGESILDEIDGLHFHTLCEQNSDDLKR 191 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + +E +FG ++ ++ I+ GGG H T DY + + + F +Y +++YLEPGEA Sbjct: 192 TAKE-VEVQFGKYLDKMSVINFGGGHHITRDDYDIDTLVEVINHFKNEYGLEVYLEPGEA 250 Query: 237 IVTNTTTLNTTVLDISENIKNLVIV----DSSVEAHVPDYLLYQESATIYPNTG------ 286 + N L TTVLD+ + N D+S H+PD L I G Sbjct: 251 VALNAGFLVTTVLDVIDGKVNGEDDIAILDASAACHMPDVLEMPYRPVIIQPNGNIAGEK 310 Query: 287 ---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 T + G +CLAGD+ G++ F++P+K GDR+ D++ Y++ + N FNG+ +P+I Sbjct: 311 GERAVTVRLGGNTCLAGDVIGDYSFDEPLKPGDRLVLCDMSIYSMVKNNTFNGMALPSIY 370 Query: 344 VKNVDGTIKAIREFSYNDYYNNL 366 N ++ IREFSY+D+ L Sbjct: 371 -YNTSLGMRKIREFSYDDFRCRL 392 >gi|27376494|ref|NP_768023.1| diaminopimelate decarboxylase [Bradyrhizobium japonicum USDA 110] gi|27349634|dbj|BAC46648.1| diaminopimelate decarboxylase [Bradyrhizobium japonicum USDA 110] Length = 421 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 63/390 (16%), Positives = 112/390 (28%), Gaps = 28/390 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + V + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHYRVFADAFAGEKVLVCYAMKANSNQSVLRTLARLGAGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ +D A+ ++ + + +L A ++ K Sbjct: 85 ELKRALAAGIPARKILFSGVGKTEDELRAALAADILCLNVESEPELELLSRLATEMGKTA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + R+NP V + ++ G E + V G H + Sbjct: 145 RISVRVNPDVDAGTHAKISTGKSENKFGIPIAHAREVYARAAKLPGIQVTGTDVHIGSQI 204 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 + + I + GGG+ + +K Sbjct: 205 TDLSKMETAFRILSEFVQTLRADGHDISHVDFGGGLGIPYYMDREAPPAPDAYAAMVKRV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 S + EPG IV N L V+ + + KN VI+D+++ + LY+ Sbjct: 265 SHNLGCTLMFEPGRMIVGNAGILVAKVIYVKHGDGKNFVIIDAAMNDLIRPT-LYEAHHD 323 Query: 281 IYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I P T P A V G C GD K GD ++ Y + + Sbjct: 324 ILPVTQPARDAATMVADVVGPVCETGDYLALDRTLPTPKAGDLLAIMTAGAYGAVQAGTY 383 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D Sbjct: 384 NTRPLVPEVLVKDDQYAVVRPRIDVEQLIA 413 >gi|332994942|gb|AEF04997.1| putative diaminopimelate decarboxylase [Alteromonas sp. SN2] Length = 416 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 71/384 (18%), Positives = 124/384 (32%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ + L + + A+K + G+ TL + G S E Sbjct: 26 QTPVYVYSRATLERHWHAFNDAIGEHPHLICYAVKANSNLGVLSTLAKIGSGFDIVSGGE 85 Query: 63 -VMLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ D A+ + +L++ A+ L Sbjct: 86 LARVIEAGGDASKVVFSGVGKKADEIRYALEQGIMCFNVESEPELHRINAVAESLGKKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167 I LRINP V ++ G + +++ NV G+ H Sbjct: 146 ISLRINPDVDAKTHPYISTGLKANKFGIARERALQTYELAASLPYLNVVGMDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 E F+ L + E I+ + +GGG+ T +P ++ Sbjct: 206 EIGPFVDALERLLLLIDELAERGITIDHLDVGGGLGVTYNDEEPPHPKAYAAAMAEKMVG 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATI- 281 + ++++ LEPG AI N L T V I E K+ IVD+++ + L I Sbjct: 266 RENLKLILEPGRAIAANAGILVTEVEFIKEGEEKSFAIVDAAMNDLLRPALYSAWQNIIP 325 Query: 282 ---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 V G C GD G+ ++ D ++ Y + +N Sbjct: 326 VKQESTATARNYDVVGPVCETGDFIGKDRELA-IEPTDLLAVRSAGAYGFAMASNYNSRC 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 P + + D TI D Sbjct: 385 RPAEIMVDGDATIVVREREILKDL 408 >gi|296273951|ref|YP_003656582.1| carboxynorspermidine decarboxylase [Arcobacter nitrofigilis DSM 7299] gi|296098125|gb|ADG94075.1| carboxynorspermidine decarboxylase [Arcobacter nitrofigilis DSM 7299] Length = 378 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 145/370 (39%), Positives = 221/370 (59%), Gaps = 7/370 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P ++ +++ L NL+ I+ A VK+LLALK F+ + FD +Y+ G +S L+ Sbjct: 11 LPSPCFVCEEELLKKNLELLKKIQDEADVKILLALKGFSLYSTFDLCKEYLKGCCASGLH 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E +L ++FG E H Y+ A+K+ E+D ++S + I+FN++SQL KF++KA IGLR Sbjct: 71 EALLASKEFGREVHTYSPAFKEEEVDEIVSLSNHIVFNSISQLKKFENKAIG-QTSIGLR 129 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP S + L +P FSRLG K+ + I NV+GL FH CE LK+ Sbjct: 130 VNPEYSSVEVDLYNPCGAFSRLGITRKNFDKDAIFNVDGLHFHALCEQN-VDALEGALKS 188 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 E++FG F+ +++W++ GGG H T DY V LKEF +Y ++YLEPGEA+ Sbjct: 189 FEEKFGEFLPKMKWVNFGGGHHITRADYDVNGLVTLLKEFKIRYPHLEVYLEPGEAVGWK 248 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRS 296 T L+ TVLDI N ++ I+D+S EAH+PD L A I + +T + G + Sbjct: 249 TGYLSATVLDIVNNGMDIAILDTSAEAHMPDTLAMPYRADIRNSAESGVKAHTYRLGGNT 308 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGDI G++ F+KP+K+GD+I ED+ Y + + FNGI +P+IA+K D + ++ Sbjct: 309 CLAGDIIGDYSFDKPLKVGDKIILEDMIHYTMVKTTTFNGIKLPSIAIKKADDCYQIVKN 368 Query: 357 FSYNDYYNNL 366 F YN+Y L Sbjct: 369 FGYNEYKARL 378 >gi|328474721|gb|EGF45526.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus 10329] Length = 377 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 168/368 (45%), Positives = 244/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + IGLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + + ++G+MFH NCENK F +L Sbjct: 125 LNPGVSYAGQDLANPARKFSRLGVQADHIKPEVFEGIDGVMFHMNCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FG ++ +++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISEQFGEYLNKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A+I + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASDNGEHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F +FE+P++IG R+ D AGY + + NWFNG+ MP++ + G I+ + EF Y Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSSGEIQKLNEFDY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 SDFKRSLS 372 >gi|226952075|ref|ZP_03822539.1| diaminopimelate decarboxylase [Acinetobacter sp. ATCC 27244] gi|226837167|gb|EEH69550.1| diaminopimelate decarboxylase [Acinetobacter sp. ATCC 27244] Length = 407 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 122/389 (31%), Gaps = 26/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L + ++ A+K + + + L + G + E Sbjct: 16 GTPLYVYSKATLEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVTGGE 75 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K + ++L++ + A KL Sbjct: 76 LARVLAAGGDPAKIVFSGLGKSEADIEKALTVGIACFNVESHAELDRIQKVAAKLGKKAP 135 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC--- 167 I LR+NP V ++ G + + G+ H Sbjct: 136 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVDATYQYAASLSNLEIVGIDCHIGSQLT 195 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224 E K F+ + + ++ ++ I +GGG+ KD + ++ EK Sbjct: 196 ETKPFVDALDRVILMIEQLKKLGINLKHIDIGGGLGVCYKDETPPTVAEYANSMRPALEK 255 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++Y+EPG +I N TL T V L N +N I+D+++ + L Sbjct: 256 LGLKVYMEPGRSISANAGTLLTKVDLLKPTNHRNFAIIDAAMNDLIRPALYEAWMDIQSV 315 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 N T + G C GD G+ ++ D ++ Y + +N Sbjct: 316 NPNSDVEVKTWDLVGAICETGDFLGKERNLA-LQENDVLAVLGAGAYGFVMSSNYNSRGR 374 Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366 + N D + L Sbjct: 375 AAEVMVNGDQAYLIRERETIESLWEKERL 403 >gi|299769073|ref|YP_003731099.1| diaminopimelate decarboxylase [Acinetobacter sp. DR1] gi|298699161|gb|ADI89726.1| diaminopimelate decarboxylase [Acinetobacter sp. DR1] Length = 416 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 64/388 (16%), Positives = 123/388 (31%), Gaps = 24/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + ++ A+K + + + L + G S E Sbjct: 25 GTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNLAVLNVLAKLGAGFDIVSGGE 84 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K N + ++L++ + A +L Sbjct: 85 LARVLKAGGDASKVVFSGLGKTEADIETSLNVGIACFNVESYAELDRLQKVAARLGKKAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167 I LR+NP V ++ G + G+ H Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYETYQYAASLPNLEIIGIDCHIGSQLT 204 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 E K F+ + + +E ++ I +GGG+ KD ++ +K EK Sbjct: 205 ETKPFVDALDRVMLMIEELKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279 +++Y+EPG +I N L T V L + +N I+D+++ + L Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTSHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 +T T + G C GD G+ +K D ++ Y + +N Sbjct: 325 VPSSDTEEKTWDLVGAICETGDFIGKDRSLA-LKENDLLAVLGAGAYGFVMSSNYNTRGR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + D + + S Sbjct: 384 AAEVMVSGDKAHLIRERETVESLWEKES 411 >gi|84393560|ref|ZP_00992314.1| diaminopimelate decarboxylase [Vibrio splendidus 12B01] gi|84375839|gb|EAP92732.1| diaminopimelate decarboxylase [Vibrio splendidus 12B01] Length = 417 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 112/378 (29%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S E Sbjct: 27 GTPLYVYSRATLERHWNAFDSSVGEHPHLVCYAVKANSNLGVLNTLARMGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ N + +L + A +L Sbjct: 87 LERVVAAGGDPAKVVFSGVGKTAAEMKRALELNIKCFNVESEPELERLNKVAGELGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LRINP V + ++ G ++G+ H + Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYAFAKTLDNLSIHGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + I+ + +GGG+ P L Sbjct: 207 DIEPFIDATDRLLALIDQLRANDINIKHLDVGGGLGVVYRDELPPQPSDYAKALLARLDN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HSDLELIFEPGRAIAANAGVLLTKVEFLKPTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C GD G+ ++ GD ++ Y + +N + Sbjct: 327 VSPRQGEAVTYDLVGPICETGDFLGKDRDLV-LEEGDLLAVRSAGAYGFAMSSNYNTRSR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + D T + Sbjct: 386 AAEVMVDGDKTHLVRQRE 403 >gi|90426344|ref|YP_534714.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisB18] gi|90108358|gb|ABD90395.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisB18] Length = 421 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 106/389 (27%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHYRVFSEAFAGVDALVCYAMKANSNQSVLRTLAKLGAGADVVSGG 84 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + ++ K D I + +L A ++ + Sbjct: 85 ELQRAVAAGIPPQKILFSGVGKTATELRAALAHDILCINVESEPELELLSRIASEMGRTA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + R+NP V + ++ G E + V G+ H + Sbjct: 145 RISVRVNPDVDSGSHAKISTGKSENKFGIPISRAREVYARAAKLPGLKVTGVDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 + + I + GGG+ + P + + +K Sbjct: 205 TDLAPLEVAFRLLADFVTVLRGDGHTISHVDFGGGLGIPYFEEPGVPPEPQAYAAMVKRV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + EPG IV N L V + + KN VI+D+++ + L Sbjct: 265 THNLGCTLMFEPGRLIVGNAGILVARVTYVKRGDAKNFVIIDAAMNDLIRPTLYEAYHDI 324 Query: 281 IYPNTG-----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + A V G C +GD GD I+ Y + +N Sbjct: 325 LPVQQAAPGSRDIVADVVGPVCESGDYLALDRSMPEPAPGDLIAIMTAGAYGAVQACTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D Sbjct: 385 TRALVPEVLVKGDNYAVVRPRVDVEQLIA 413 >gi|300727208|ref|ZP_07060624.1| carboxynorspermidine decarboxylase [Prevotella bryantii B14] gi|299775446|gb|EFI72040.1| carboxynorspermidine decarboxylase [Prevotella bryantii B14] Length = 384 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 116/375 (30%), Positives = 195/375 (52%), Gaps = 14/375 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++Q+L NNL + + G+ ++LA K +A W F +Y+ TT+SSL E Sbjct: 10 PVYVLEEQRLRNNLSLISEVARTGGIDIILAFKAYALWKTFPIFREYIRATTASSLSEAK 69 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--GLRI 122 L +FG + H ++ AY D EID + + FN++SQ ++ + ++ + +I G+RI Sbjct: 70 LALLEFGSKAHTFSPAYTDYEIDEIAHCSSHLTFNSLSQYQRYHQRVRQANSEISLGIRI 129 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S + L +P P +R G E +++ G H +CEN S + + +I Sbjct: 130 NPEYSEIETDLYNPCAPGTRFGVSADKLPEILPEDIEGFHCHCHCENGSDVFQRTLT-HI 188 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E +F + QI+WI+ GGG T KDY + Q L +F +KY + LEPG A T Sbjct: 189 EDKFAKWFPQIKWINFGGGHLMTRKDYDIPLLIQILTDFKKKYPNLHVILEPGSAFGWQT 248 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT---------GPYTAM 291 +L + V+D+ E+ + + S H+PD L ++ PY Sbjct: 249 GSLVSQVVDVVEDKGIKTAILNVSFTCHMPDCLEMPYWPSVRNAKVIEGRYDKSIPYLYR 308 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCL+GD + F+ ++IG+ I FED+ Y + N FNGI P+I + +++G + Sbjct: 309 LGGNSCLSGDFMESWQFDHELQIGENIIFEDMLHYTTVKTNMFNGITHPSIGIVHLNGEL 368 Query: 352 KAIREFSYNDYYNNL 366 + +++F Y DY + + Sbjct: 369 EILKDFGYEDYRDRM 383 >gi|296113696|ref|YP_003627634.1| diaminopimelate decarboxylase [Moraxella catarrhalis RH4] gi|295921390|gb|ADG61741.1| diaminopimelate decarboxylase [Moraxella catarrhalis RH4] gi|326562436|gb|EGE12755.1| diaminopimelate decarboxylase [Moraxella catarrhalis 7169] gi|326562805|gb|EGE13100.1| diaminopimelate decarboxylase [Moraxella catarrhalis 46P47B1] gi|326563210|gb|EGE13478.1| diaminopimelate decarboxylase [Moraxella catarrhalis 12P80B1] gi|326563474|gb|EGE13737.1| diaminopimelate decarboxylase [Moraxella catarrhalis 103P14B1] gi|326569144|gb|EGE19206.1| diaminopimelate decarboxylase [Moraxella catarrhalis BC1] gi|326570630|gb|EGE20666.1| diaminopimelate decarboxylase [Moraxella catarrhalis BC7] gi|326571337|gb|EGE21354.1| diaminopimelate decarboxylase [Moraxella catarrhalis BC8] gi|326573784|gb|EGE23741.1| diaminopimelate decarboxylase [Moraxella catarrhalis 101P30B1] Length = 435 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 67/381 (17%), Positives = 128/381 (33%), Gaps = 22/381 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y ++ LL N + ++ A+K + + TL + G S E Sbjct: 50 GTPLYAYSQRTLLENYQSYTDAFDAIDHQICYAVKANSNLAILKTLAKAGAGFDIVSKGE 109 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG- 119 + + + Y+ K + D ++S+L+ + A + ++ Sbjct: 110 LARVLQVADAKKVVYSGVGKTADDIEYALKADIHCFNVESLSELDTINEVAGRQNQIARI 169 Query: 120 -LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171 LRINP V ++ G + + + + + G+ H + Sbjct: 170 SLRINPDVDAKTHPYISTGMKDNKFGISHEQAVAAYVYAHHLPNLKIVGIDCHIGSQLLD 229 Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEKY 225 FS L + + +++ I LGGG+ D L ++ Sbjct: 230 TDGFSDALDKLIELIDTLTDKGIKLQHIDLGGGLGVRYIDENPVSIDQVATVLLPRLKQL 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLL---YQESATI 281 +++YLEPG ++V N L TTV + IVD+S+ + L Sbjct: 290 GLKLYLEPGRSLVANAGVLLTTVDVLKPTEFKNFAIVDASMSELIRPALYESQMAIIPAK 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T V G C + D G+ +++GD ++ Y + +N P Sbjct: 350 LSRDTAKTWDVVGTVCESSDFLGKDRILS-LQVGDTLAVTGAGAYGFSMACNYNTRPRPC 408 Query: 342 IAVKNVDGTIKAIREFSYNDY 362 + N + + +D Sbjct: 409 EVMVNHGTHRLIRKREALDDL 429 >gi|319897770|ref|YP_004135967.1| diaminopimelate decarboxylase, plp-binding [Haemophilus influenzae F3031] gi|317433276|emb|CBY81651.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus influenzae F3031] Length = 415 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 58/384 (15%), Positives = 116/384 (30%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + + + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARKVYNLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ + Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKD 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L + Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLAREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D + R + + Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408 >gi|229845773|ref|ZP_04465885.1| diaminopimelate decarboxylase [Haemophilus influenzae 7P49H1] gi|229810777|gb|EEP46494.1| diaminopimelate decarboxylase [Haemophilus influenzae 7P49H1] Length = 415 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L + Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D + R + + Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408 >gi|190893634|ref|YP_001980176.1| diaminopimelate decarboxylase [Rhizobium etli CIAT 652] gi|190698913|gb|ACE92998.1| diaminopimelate decarboxylase protein [Rhizobium etli CIAT 652] Length = 422 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 61/389 (15%), Positives = 110/389 (28%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + A+K + + TL + G S Sbjct: 25 VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84 Query: 62 EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ A+ + + +L +A Sbjct: 85 ELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIYCFNVESEPELEILNQRAVSAGKKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + RINP V + ++ G + V G+ H + Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIYAHAAKLPGIEVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F K + I+ + +GGG+ KD + +K Sbjct: 205 TELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGLGVPYKDDNNPPPLPDAYAAIVKNQ 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + ++ EPG IV N L T VL + + K VIVD ++ + L Sbjct: 265 LRDLNCKVITEPGRLIVGNAGILVTEVLYVKDGGEKTFVIVDGAMNDLIRPTLYEAYHEI 324 Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A V G C GD K GD ++ Y + +N Sbjct: 325 RPVTISAANAPRIRADVVGPVCETGDYLALDREMAMPKPGDLLAVSTAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +Y + + Sbjct: 385 SRLLVPEVLVKGGDFHAIRPRRTYAELIS 413 >gi|209551143|ref|YP_002283060.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536899|gb|ACI56834.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 422 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 65/388 (16%), Positives = 112/388 (28%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + A+K + + TL + G S Sbjct: 25 VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ K + A+ + + +L +A K Sbjct: 85 ELRRALAAGIPASRIMFSGVGKTPQEMDFALEAGIYCFNVESEPELEILNQRAVKAGTKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + RINP V + ++ G + V G+ H + Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIYAHAARLPGIEVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F K + I+ + +GGG+ KD + +K Sbjct: 205 TELQPFDDAFKLLHDLVATLRADGHTIDHVDIGGGLGIPYKDDNNPPPLPDAYAAIVKNQ 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + +I EPG IV N L T VL + + K VIVD ++ + L Sbjct: 265 LRGLNCKIITEPGRLIVGNAGILVTEVLYVKDGGEKTFVIVDGAMNDLIRPTLYEAYHEI 324 Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A V G C GD K GD I+ Y + +N Sbjct: 325 RPVTISAANAPRIRADVVGPVCETGDYLALDREMAMPKPGDLIAVSTAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + +Y + Sbjct: 385 SRLLVPEVLVKGSDFHTIRPRRTYAELI 412 >gi|167749127|ref|ZP_02421254.1| hypothetical protein EUBSIR_00071 [Eubacterium siraeum DSM 15702] gi|167657900|gb|EDS02030.1| hypothetical protein EUBSIR_00071 [Eubacterium siraeum DSM 15702] Length = 392 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 124/385 (32%), Positives = 195/385 (50%), Gaps = 25/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ L N + ++ G K+LLA K F+ + + ++ Y+ GTT+S LYE Sbjct: 12 DTPCYVTEECYLKRNCEILKSVQDMTGCKILLAQKAFSMYSTYPLISGYLSGTTASGLYE 71 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 LG+E FG ETH ++ AY D EI+ ++ +FN++ Q +D K +R+ Sbjct: 72 ARLGYEYFGNETHVFSPAYTDKEINELVKYAGHFVFNSIRQFALHRDAV--KDKHCLIRV 129 Query: 123 NPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLC 174 NP S + DP P SRLG+ E + ++GL FH CE S Sbjct: 130 NPRFSTQEGHEIYDPCAPGSRLGQTLASFEEDIKRYGKEILDEIDGLHFHTLCEQNSDDL 189 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + +E +FG ++ ++ I+ GGG H T DY + + + F +Y +++YLEPG Sbjct: 190 KRTAKE-VEVQFGKYLDKMSVINFGGGHHITRDDYDIDTLVEVINHFKNEYGLEVYLEPG 248 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV----DSSVEAHVPDYLLYQESATIYPNTG---- 286 EA+ N L TTVLD+ + N D+S H+PD L I G Sbjct: 249 EAVALNAGFLVTTVLDVIDGKVNGEDDIAILDASAACHMPDVLEMPYRPVIIQPNGNIAG 308 Query: 287 -----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T + G +CLAGD+ G++ F++P+K GDR+ D++ Y++ + N FNG+ +P+ Sbjct: 309 EKGERAVTVRLGGNTCLAGDVIGDYSFDEPLKPGDRLVLCDMSIYSMVKNNTFNGMALPS 368 Query: 342 IAVKNVDGTIKAIREFSYNDYYNNL 366 I N ++ IREFSY D+ L Sbjct: 369 IY-YNTSLGMREIREFSYEDFRCRL 392 >gi|110678901|ref|YP_681908.1| diaminopimelate decarboxylase [Roseobacter denitrificans OCh 114] gi|109455017|gb|ABG31222.1| diaminopimelate decarboxylase [Roseobacter denitrificans OCh 114] Length = 421 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 60/390 (15%), Positives = 115/390 (29%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+YL LL + + A+K + + TL Q G S Sbjct: 25 VGTPFYLYSTATLLRHFRLFDEALDGMDHLVCYAMKAASNQAILKTLAQAGAGMDVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E + G+ ++ K A+ + ++ A + Sbjct: 85 EYLRAKAAGVPGDKIVFSGVGKTAAEIRLALEGGIRQFNVESEPEMEVLNAAALEMGVTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169 I +R+NP V + ++ G E + V G+ H + Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPISRAREVYALAASMKGLEVIGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F A + + + I + LGGG+ + +K Sbjct: 205 TELAPFEAAYDKVAELTEQLRAEGHNIRRLDLGGGLGIPYARDNQAPPLPSDYGAMIKRK 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280 +I +EPG IV N + + V+ + I+D ++ + + Sbjct: 265 LGHLGCEIEIEPGRLIVGNAGIMVSEVIYVKSGEDRDFLIIDGAMNDLIRPAMYEAYHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + G C GD F PV G+R++F Y + +N Sbjct: 325 IPVVEPDPGVEQVKFDIVGPVCETGDTFARARIMPPVAAGERVAFRSAGAYGAVMSSEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D ++++ Sbjct: 385 SRPLIPEVLVHEDQFAVIRPRPTFDEMIKR 414 >gi|260466687|ref|ZP_05812874.1| diaminopimelate decarboxylase [Mesorhizobium opportunistum WSM2075] gi|259029550|gb|EEW30839.1| diaminopimelate decarboxylase [Mesorhizobium opportunistum WSM2075] Length = 422 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 66/388 (17%), Positives = 122/388 (31%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLTRHYRVFAQAFAGLDALVCYAMKANSNQAVLRTLARLGAGADVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E+ ++ K A+ + + +L +A L K Sbjct: 85 ELRRALAAGIPAGKILFSGVGKTAREIDFALTAGILCFNVESEPELELLSSRAVALGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I LRINP V + ++ G + + + V G+ H + Sbjct: 145 PISLRINPDVDARTHKKISTGKAENKFGIPWQRARQVYARAAELPGIKVTGIDTHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + IE I +GGG+ + + Q ++++ Sbjct: 205 TELQPFDDAFALLVDLVGALRADGHAIEHIDVGGGLGIPYRVDNNPPPLPDAYAQIVRKY 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 K +++ EPG IV N L + V+ + E + KN ++VD+++ + L Sbjct: 265 VTKLGLKVMFEPGRLIVGNAGILVSEVIFVKEGDAKNFLVVDAAMNDLIRPTLYDAFHDV 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P V G C GD G +K GD ++ Y + +N Sbjct: 325 RPVVQPPADTPRMMVDVVGPVCETGDYIGLDRDLPRLKAGDLVAVSTAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + + D +Y+D Sbjct: 385 TRLLVPEVLVDGDRFHVVRPRLTYDDLI 412 >gi|92118935|ref|YP_578664.1| diaminopimelate decarboxylase [Nitrobacter hamburgensis X14] gi|91801829|gb|ABE64204.1| diaminopimelate decarboxylase [Nitrobacter hamburgensis X14] Length = 421 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 111/390 (28%), Gaps = 26/390 (6%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++ TP+Y L + + A+K + + TL + G S Sbjct: 24 VVGTPFYCYSTATLERHYRVFADAFAGVDHLVCYAVKANSNQSVLRTLAKLGAGADVVSG 83 Query: 61 YEVMLGH-EKFGGETHAYNV-AYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKK 117 E+ ++ D E+ A L+ I + +L+ A + + Sbjct: 84 GELKRALAAGIPASKILFSGVGKTDAELRAALAVDVLCINVESEPELDLLSKLASEAGRT 143 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168 +R+NP V R ++ G V G+ H + Sbjct: 144 ARISIRVNPDVDSGTHAKISTGRSENKFGIPIARARAVYAHAAKLPGIAVTGVDMHIGSQ 203 Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKE 220 A + + I + GGG+ + + + ++ Sbjct: 204 ITDLGPMEAAFRLLADFVTTLRADGHTISHVDFGGGLGIPYYEDRAAPPEPLAYAEMVRR 263 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 + + EPG IV N L T V+ + + +N +I+D+++ + L Sbjct: 264 VTHNLGCTLMFEPGRMIVGNAGILVTRVIYVKHGDARNFIIIDAAMNDLIRPTLYEAYHQ 323 Query: 280 TIYPNTGPYTAM-----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I P A V G C GD + GD ++ Y + + Sbjct: 324 IIPVRAAPKDAPVMVADVVGPVCETGDYLALGRNLPEPQAGDLLAIMTAGAYGAVQSGTY 383 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D Sbjct: 384 NTRALIPEVLVKDDQYAVVRPRIEVEQLIA 413 >gi|27364546|ref|NP_760074.1| diaminopimelate decarboxylase [Vibrio vulnificus CMCP6] gi|320154948|ref|YP_004187327.1| diaminopimelate decarboxylase [Vibrio vulnificus MO6-24/O] gi|27360665|gb|AAO09601.1| diaminopimelate decarboxylase [Vibrio vulnificus CMCP6] gi|319930260|gb|ADV85124.1| diaminopimelate decarboxylase [Vibrio vulnificus MO6-24/O] Length = 417 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 106/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S E Sbjct: 27 GTPLYVYSRATLERHWHAFDRSVEGHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ N + +L + A +L Sbjct: 87 LERVLAAGGDPRKVVFSGVGKTEAEMRRALELNIKCFNVESEPELERLNRVAGELGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V ++ G NV G+ H + Sbjct: 147 ISLRINPDVDAQTHPYISTGLRDNKFGIAFDRAPAVYQFAQSLANLNVQGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F + + I + +GGG+ ++ + K + Sbjct: 207 AIEPFIDATDRLLALIDDLKEQGINIRHLDVGGGLGVVYRNELPPQPSEYAKALLGRLEN 266 Query: 228 Q----IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 + EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C GD G+ + D ++ Y + +N Sbjct: 327 VQPRQGEAVTYDLVGPICETGDFLGKDRSLV-LAENDLLAVRSAGAYGFVMSSNYNTRVR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + Sbjct: 386 AAEVMVDGKQHYLVRQRE 403 >gi|326572968|gb|EGE22947.1| diaminopimelate decarboxylase [Moraxella catarrhalis CO72] Length = 435 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 67/381 (17%), Positives = 128/381 (33%), Gaps = 22/381 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y ++ LL N + ++ A+K + + TL + G S E Sbjct: 50 GTPLYAYSQRALLENYQSYTDAFDAIDHQICYAVKANSNLAILKTLAKAGAGFDIVSKGE 109 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG- 119 + + + Y+ K + D ++S+L+ + A + ++ Sbjct: 110 LARVLQVADAKKVVYSGVGKTADDIEYALKADIHCFNVESLSELDTINEVAGRQNQIARI 169 Query: 120 -LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171 LRINP V ++ G + + + + + G+ H + Sbjct: 170 SLRINPDVDAKTHPYISTGMKDNKFGISHEQAVAAYVYAHHLPNLKIVGIDCHIGSQLLD 229 Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEKY 225 FS L + + +++ I LGGG+ D L ++ Sbjct: 230 TDGFSDALDKLIELIDTLTDKGIKLQHIDLGGGLGVRYIDENPVSIDQVATVLLPRLKQL 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLL---YQESATI 281 +++YLEPG ++V N L TTV + IVD+S+ + L Sbjct: 290 GLKLYLEPGRSLVANAGVLLTTVDVLKPTEFKNFAIVDASMSELIRPALYESQMAIIPAK 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T V G C + D G+ +++GD ++ Y + +N P Sbjct: 350 LSRDTAKTWDVVGTVCESSDFLGKDRILS-LQVGDTLAVTGAGAYGFSMACNYNTRPRPC 408 Query: 342 IAVKNVDGTIKAIREFSYNDY 362 + N + + +D Sbjct: 409 EVMVNHGTHRLIRKREALDDL 429 >gi|212633301|ref|YP_002309826.1| diaminopimelate decarboxylase [Shewanella piezotolerans WP3] gi|212554785|gb|ACJ27239.1| Diaminopimelate decarboxylase [Shewanella piezotolerans WP3] Length = 414 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 65/382 (17%), Positives = 114/382 (29%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + N + A+K + + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWYAFDNAVANHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ + ++L + AQ+++K Sbjct: 86 LARVIEAGGDPAKVVFSGVGKTVAEMELALEIGIYCFNVESAAELEQLSVVAQRMNKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167 + LRINP V ++ G ++ E + G+ H Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEAIFLRAKELPCIEIKGVDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 E K FL + + +I+ +GGG+ T D + L E Sbjct: 206 EIKPFLDAMDRMLALIDRLAELGIEIKHFDVGGGLGVTYDDELPPQPDVYAAALLERLGG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + EN VD ++ + L Sbjct: 266 RDLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFALVDGAMNDLIRPSLYSAWQKIIPA 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 I V G C GD G+ + GD ++ Y + +N Sbjct: 326 IDRGGETLNYDVVGPVCETGDFLGKDRQL-NIAAGDYLAIRSSGAYGFTMASNYNSRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + D Sbjct: 385 AELMVDGDNAYVIREREKLAQL 406 >gi|154492269|ref|ZP_02031895.1| hypothetical protein PARMER_01903 [Parabacteroides merdae ATCC 43184] gi|154087494|gb|EDN86539.1| hypothetical protein PARMER_01903 [Parabacteroides merdae ATCC 43184] Length = 366 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 122/366 (33%), Positives = 187/366 (51%), Gaps = 9/366 (2%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 ++++ L NL +++ AGV ++LA K FA W F + +Y+ +T+SS +E L E Sbjct: 1 MEEELLRRNLSLIKSVKERAGVNVILAFKAFAMWKAFPIVREYIPYSTASSKFEARLAFE 60 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSV 126 + G H Y+ AY + + +L + FN+++Q +F A GLRINP Sbjct: 61 EMGSRAHTYSPAYTEADFPEILRYSSHVTFNSLTQFERFYPMVQADGNRVSCGLRINPEY 120 Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 S + L +P P SR+G V GL FH CE+ S+ + + +EK F Sbjct: 121 SDVETDLYNPCAPGSRMGVVSDLLDGLLPDGVEGLHFHTLCESSSYDLEKTLGE-VEKRF 179 Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLN 245 G F+ I+W+++GGG T K Y + L+ F KY +I +EPG A T L Sbjct: 180 GRFLPHIKWLNMGGGHLMTRKGYDTEHLIGLLQAFKAKYPNLEIIMEPGSAFAWQTGFLL 239 Query: 246 TTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRSCLAG 300 TTV+DI EN I+D+S H+PD L I P G + G SCL+G Sbjct: 240 TTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYKPVIRGAIEPEEGKPVYRIGGNSCLSG 299 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 D G++ FE+P+K+GD++ FED+ Y I + FNGI P++A+ + + + +EF Y Sbjct: 300 DYMGDWFFEQPLKVGDKLIFEDMIHYTIVKTTMFNGIPHPSLALWSKEDRLVMYKEFGYE 359 Query: 361 DYYNNL 366 DY + Sbjct: 360 DYKGRM 365 >gi|15891339|ref|NP_357011.1| diaminopimelate decarboxylase [Agrobacterium tumefaciens str. C58] gi|15159724|gb|AAK89796.1| diaminopimelate decarboxylase [Agrobacterium tumefaciens str. C58] Length = 422 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 61/389 (15%), Positives = 113/389 (29%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + A+K + + TL + G S Sbjct: 25 VGTPFYVYSTATLERHYKVFSGAFADVDAMVCYAMKANSNQAVLKTLAKLGAGIDVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ K A+ + + +L +A K Sbjct: 85 ELRRALAAGVPASRIMFSGVGKTVAEMDYALEAGIYCFNIESEPELEVLNLRAVKAGKRA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + RINP V + ++ G + V G+ H + Sbjct: 145 HVSFRINPDVDARTHAKISTGKKENKFGISYERARAVYAHAATLPGIEVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + + + I + +GGG+ +D + +K Sbjct: 205 TELQPFEDAFRLLRELVEVLRTDGHAISHVDIGGGLGIPYRDDNNPPPLPDAYAHIVKNE 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + + +I EPG IV N L T V+ + + K VIVD ++ + L Sbjct: 265 LKSLNCKIVTEPGRLIVGNAGILVTEVIYVKDGGDKTFVIVDGAMNDLIRPTLYEAYHGI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A + G C GD + GD I+ Y + +N Sbjct: 325 RPVVQPSENAPRIKADIVGPVCETGDYLALDREMAAPQPGDLIAVSSAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D +Y + Sbjct: 385 SRLLVPEVLVKGDRFHVIRPRGTYEELIA 413 >gi|294671408|ref|ZP_06736257.1| hypothetical protein NEIELOOT_03116 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306885|gb|EFE48128.1| hypothetical protein NEIELOOT_03116 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 406 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 60/385 (15%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + +L + + A+K + + G S E Sbjct: 18 GTPLYVYSQAELDSAFARYQTAFAALAPLICYAVKANGNLSVIRRFAELGSGFDIVSGGE 77 Query: 63 VMLGHEKFG-GETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G + ++ K S ++ +L++ + A +L Sbjct: 78 LARVLAAGGRADKTIFSGVGKSAAEIEFALKSGIKCFNVESLPELDRINEIAGRLKTAAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LRINP V ++ G +D + N+ G+ H + Sbjct: 138 VSLRINPDVDAQTHPYISTGLKANKFGIAMEDAERAYLHAASLPHLNIIGIDCHIGSQLI 197 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + + + ++ I LGGG+ ++ + + +++ Sbjct: 198 KLEPLVEACERLLPLIDKLAAHGIGLQHIDLGGGVGIVYQNEETPDLAAYAAAVQKLLGG 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESAT--- 280 S+++ LEPG ++V N L T V + +N KN V+VD+++ + L Sbjct: 258 RSLKLILEPGRSLVGNAGALLTRVEFVKQNGDKNFVVVDAAMNDLMRPALYQAYHHIENA 317 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + P+ A + G C GD + + GD + Y + +N Sbjct: 318 EPSISAPFAADIVGPICETGDFLAKDRMIS-ARAGDLLVVRSAGAYASSMAGNYNTRPRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + N + + N Sbjct: 377 AEVLINGSEAKIVRHRETLEEMLAN 401 >gi|260583176|ref|ZP_05850956.1| diaminopimelate decarboxylase [Haemophilus influenzae NT127] gi|260093794|gb|EEW77702.1| diaminopimelate decarboxylase [Haemophilus influenzae NT127] Length = 415 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 DTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L I Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLAREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D + R + + Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408 >gi|163781655|ref|ZP_02176655.1| diaminopimelate decarboxylase [Hydrogenivirga sp. 128-5-R1-1] gi|159882875|gb|EDP76379.1| diaminopimelate decarboxylase [Hydrogenivirga sp. 128-5-R1-1] Length = 422 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 57/381 (14%), Positives = 112/381 (29%), Gaps = 25/381 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + G + A+K + + G S E Sbjct: 38 GTPLYVYSASYIRERIRAYQKAF--PGALVCYAVKANFNPEVVRVAGEEGAGADIVSGGE 95 Query: 63 VMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 ++ + Y K + + + +L + A +L K+ Sbjct: 96 LVAALKGGIDPSRIVYAGVGKTVPELELAIEKEILMFNVESRDELYVLDEIAGRLGKRAR 155 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + R+NP V S+ G + E V G+ H + Sbjct: 156 IAIRVNPDVDPKTHPYISTGMKKSKFGVDFETAREEYRLARELKNLEVVGIHCHIGSQLL 215 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFSE 223 + ++ + + + +I ++ +GGG+ K + + + E Sbjct: 216 DVSPYREAVQKVVELYRDLTDEGFEINYLDIGGGLGIKYKPEDREPSPEELAREVLPLLE 275 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY 282 S QI LEPG +I N L V + + I+ D+ + V + + Sbjct: 276 GVSAQIILEPGRSITGNAGLLIAQVQFLKDKEIKHFIIVDAGMNDLVRPAIYDAYHHVVP 335 Query: 283 PNTGPYTA---MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C GD + + ++ GD I+ Y + +N Sbjct: 336 VESKGREHIIADIVGPICETGDFLAKDRRIEFLERGDYIAVLSAGAYGFAMASHYNVRPR 395 Query: 340 PTIAVKNVDGTIKAIREFSYN 360 P + YN Sbjct: 396 PAEVLVENGSYRLIREREDYN 416 >gi|319781291|ref|YP_004140767.1| diaminopimelate decarboxylase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167179|gb|ADV10717.1| diaminopimelate decarboxylase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 422 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 65/388 (16%), Positives = 119/388 (30%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLTRHYRVFAQSFAGLDTLVCYAMKANSNQAVLRTLAKLGAGADVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K A+ + + +L + A Sbjct: 85 ELRRALAAGIPAGKILFSGVGKTAREMDFALAAGILCFNVESEPELELLSARAVALGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I LRINP V + ++ G + + + + G+ H + Sbjct: 145 PISLRINPDVDARTHKKISTGKAENKFGIPWQRARQVYARAATLPGIRITGIDTHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + IE I LGGG+ + + Q +++ Sbjct: 205 TELQPFDDAFALLVDLVGALRADGHAIEHIDLGGGLGIPYRVDNNPPPLPDAYAQIVRKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 K +++ EPG IV N L + V+ + E + KN ++VD+++ + L Sbjct: 265 VTKLGLKVMFEPGRLIVGNAGILVSEVIFVKEGDAKNFLVVDAAMNDLIRPTLYDAFHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P V G C GD G +K GD I+ Y + +N Sbjct: 325 RPVVQPPADTPRMMVDVVGPVCETGDYIGLDRDLPRLKAGDLIAVSTAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + + D +Y+D Sbjct: 385 TRLLVPEVLVDGDRFHVVRPRLTYDDLI 412 >gi|156105141|gb|ABU49109.1| diaminopimelate decarboxylase [Mesorhizobium ciceri] Length = 422 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 65/388 (16%), Positives = 119/388 (30%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLTRHYRVFAQSFAGLDTLVCYAMKANSNQAVLRTLAKLGAGADVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K A+ + + +L + A Sbjct: 85 ELRRALAAGIPAGKILFSGVGKTAREMDFALAAGILCFNVESEPELELLSARAVALGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I LRINP V + ++ G + + + + G+ H + Sbjct: 145 PISLRINPDVDARTHKKISTGKAENKFGIPWQRARQVYARAATLPGIRITGIDTHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + IE I LGGG+ + + Q +++ Sbjct: 205 TELQPFDDAFALLVDLVGALRADGHAIEHIDLGGGLGIPYRVDNNPPPLPDAYAQIVRKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 K +++ EPG IV N L + V+ + E + KN ++VD+++ + L Sbjct: 265 VTKLGLKVMFEPGRLIVGNAGILVSEVIFVKEGDAKNFLVVDAAMNDLIRPTLYDAFHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P V G C GD G +K GD I+ Y + +N Sbjct: 325 RPVVQPPADTPRMMVDVVGPVCETGDYIGLDRDLPRLKAGDLIAVSTAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + + D +Y+D Sbjct: 385 TRLLVPEVLVDGDRFHVVRPRLTYDDLI 412 >gi|145637736|ref|ZP_01793388.1| diaminopimelate decarboxylase [Haemophilus influenzae PittHH] gi|145269085|gb|EDK09036.1| diaminopimelate decarboxylase [Haemophilus influenzae PittHH] Length = 415 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L + Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLEREKTIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D + R + + Sbjct: 385 RTAEVLVDRDKSYLIRRRETLQEL 408 >gi|330444897|ref|ZP_08308552.1| diaminopimelate decarboxylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489207|dbj|GAA03049.1| diaminopimelate decarboxylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 416 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 63/383 (16%), Positives = 111/383 (28%), Gaps = 24/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWKAFDEAVATQPHLICYAVKANSNLGVLNVLARLGSGFDIVSQGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ + +L + A++L Sbjct: 87 LERVIAAGGDPAKVVFSGVGKTSAEMKRALELGIKCFNVESEPELERLNLVAEQLGVIAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167 I LRINP V ++ G + +E V G+ H Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFERAVEVYRLAHSLPHLKVVGMDCHIGSQLT 206 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 E F+ + L + E IE + LGGG+ T D K + Sbjct: 207 EITPFIDATDRLLALVDELKAEGIAIEHLDLGGGLGVTYSDEQPPLPADYAKALLGRLES 266 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 ++ EPG AI N L T V + IVD+++ + L Sbjct: 267 YPELELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIVDAAMNDLIRPTLYSAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G C GD G+ + GD ++ Y + +N Sbjct: 327 VTPRQGEAQVYDLVGPICETGDFIGKDRSLC-LAQGDLLAVRSAGAYGFVMASNYNTRAR 385 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 + + + + Sbjct: 386 AAEVIVDGEQVHLVRERETLAQL 408 >gi|68249326|ref|YP_248438.1| diaminopimelate decarboxylase [Haemophilus influenzae 86-028NP] gi|68057525|gb|AAX87778.1| diaminopimelate decarboxylase [Haemophilus influenzae 86-028NP] Length = 415 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L + Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D + R + + Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408 >gi|289578961|ref|YP_003477588.1| diaminopimelate decarboxylase [Thermoanaerobacter italicus Ab9] gi|289528674|gb|ADD03026.1| diaminopimelate decarboxylase [Thermoanaerobacter italicus Ab9] Length = 445 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 71/400 (17%), Positives = 135/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ L N K G +++ A K F + + + G S Sbjct: 29 GTPLYVIDEELLRQNCRAFYNGFKKDYPGNEVIYASKAFMTMAICKIIEEEKLGLDVVSG 88 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-- 115 E+ F E ++ ++ I A+ +N II + +LN D A+K++ Sbjct: 89 GELYTALKAGFPAEKIYFHGNNKSREELIMALENNIGRIIVDNWYELNMLNDLAKKMNKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 I +RI+P V + S+ G + + E N+ GL H Sbjct: 149 PNIYIRISPGVEAHTHQYVKTGQIDSKFGFPLFNGDAIKAIEYALTLENVNLVGLHSHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + A ++ + ++ + LGGG + +++ Sbjct: 209 SQIFDAESYKAEIEIMMNFLKLLKEFLGWEVGELDLGGGFGIAYVEEDDPQPIEQIASEI 268 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + I +EPG +I+ N T TV I + V + ++ Sbjct: 269 MQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKDIPGVRKYVAVDGGMSDNI 328 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N + G+ C +GD+ ++ GD ++ Sbjct: 329 RTALYGAKYDAIVANKAKNIKSEKVSIAGKLCESGDMLIWDITLPKIEEGDILAVTCTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N + P + + +Y D N Sbjct: 389 YNYSMASNYNRLPRPAAVLVYNGQADIIVARETYEDLIRN 428 >gi|319775330|ref|YP_004137818.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus influenzae F3047] gi|329122674|ref|ZP_08251252.1| diaminopimelate decarboxylase [Haemophilus aegyptius ATCC 11116] gi|317449921|emb|CBY86133.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus influenzae F3047] gi|327472548|gb|EGF17978.1| diaminopimelate decarboxylase [Haemophilus aegyptius ATCC 11116] Length = 415 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L + Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D + R + + Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408 >gi|313683044|ref|YP_004060782.1| diaminopimelate decarboxylase [Sulfuricurvum kujiense DSM 16994] gi|313155904|gb|ADR34582.1| diaminopimelate decarboxylase [Sulfuricurvum kujiense DSM 16994] Length = 400 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 60/383 (15%), Positives = 123/383 (32%), Gaps = 21/383 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D K+ ++ + L A+K + + Q G S+ E Sbjct: 12 GTPLYVYDFDKMKTQFESLKEAFRGRKSILAYAVKANSNLSVVKHFAQLGSGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 V ++ K + D I + ++L + + A++L K Sbjct: 72 VRRALMAGVPKYRIIFSGVGKRDDEIREAIESDILYINVESEAELGRVEMIARELGAKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 + R+NP++ ++ G + S+ + G+ FH + Sbjct: 132 ISIRVNPNIDPKTHPYISTGLHDNKFGVEIVAAKRMYIQAKNSDHLDPVGIHFHIGSQLT 191 Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 ++ ++ + ++++ +GGG+ + D+ Q + + Sbjct: 192 ELEPIYEAAVIVADLLRSLQAIDIELKFFDIGGGLGVRYDNETTIEPYDYAQAILSALKG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL--YQESATI 281 V I EPG + N T VL + K V+VD ++ + L Y + Sbjct: 252 IDVTIICEPGRFLTANAGYFLTKVLYEKNNGAKRFVMVDGAMNDLIRPSLYKAYHRIEAL 311 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + A V G C +GD + + P++ D + Y + +N Sbjct: 312 DKSGEESIADVVGPVCESGDFLAKNYPLPPMEHNDLLVIHSAGAYGFGMGSNYNTRGRSA 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 R ++ D Sbjct: 372 EIAVEGANVRLIRRRENFEDVIA 394 >gi|217077393|ref|YP_002335111.1| diaminopimelate decarboxylase [Thermosipho africanus TCF52B] gi|217037248|gb|ACJ75770.1| diaminopimelate decarboxylase [Thermosipho africanus TCF52B] Length = 384 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 67/374 (17%), Positives = 129/374 (34%), Gaps = 14/374 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+ ++ L ++ + + A K + L + G Sbjct: 12 IGTPVYIYFEKILEERINKVKNVFEEINFFPTFAAKANNNPAILKILKNHGFGVDILGEG 71 Query: 62 EVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E++ G+ +N K + + + ++ + + ++ Sbjct: 72 ELLACKIASIEGDKIVWNGNGKTKEQKDLMKEYKVKYVNVDSKEEFENLWK--NEDDFEL 129 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-KNVNGLMFHNNCENKSFLCFSA 177 LR+NP + + G K E + ++G+ H + F Sbjct: 130 FLRVNPDIDAKTHPYISTGLKKHKFGVDFKTAEEILKSQKISGVHIHIGSQITDVKPFKE 189 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE--KYSVQIYLEPGE 235 ++ K + IE I++GGG KD + + +E K + E G Sbjct: 190 AIEKTLKLCQKY--NIEKINIGGGWGIKYKDENELNTQEYKEEIIPLLKNFKLVINELGR 247 Query: 236 AIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLL--YQESATIYPNTGPYTAMV 292 I+ L T V I + K + +S + + L Y E + + A V Sbjct: 248 FIIAPAGFLLTRVTLIKKTEKKFFVVTESGMNHLLRPALYNAYHEIEVLNNSKDEILADV 307 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G C +GD + K +IG+ + ++ Y + N +NG P + DG IK Sbjct: 308 VGPLCESGDFLAKERKIKKPEIGELLVIKNAGAYGFSMANNYNGTVRPAEVLITKDGKIK 367 Query: 353 AIR-EFSYNDYYNN 365 IR ++++ + N Sbjct: 368 LIRKRETFDELFKN 381 >gi|326574794|gb|EGE24728.1| diaminopimelate decarboxylase [Moraxella catarrhalis O35E] Length = 435 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 67/381 (17%), Positives = 128/381 (33%), Gaps = 22/381 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y ++ LL N + ++ A+K + + TL + G S E Sbjct: 50 GTPLYAYSQRALLENYQSYTDAFDTIDHQICYAVKANSNLAILKTLAKAGAGFDIVSKGE 109 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG- 119 + + + Y+ K + D ++S+L+ + A + ++ Sbjct: 110 LARVLQVADAKKVVYSGVGKTADDIEYALKADIHCFNVESLSELDTINEVAGRQNQIARI 169 Query: 120 -LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171 LRINP V ++ G + + + + + G+ H + Sbjct: 170 SLRINPDVDAKTHPYISTGMKDNKFGISHEQAVAAYVYAHHLPNLKIVGIDCHIGSQLLD 229 Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEKY 225 FS L + + +++ I LGGG+ D L ++ Sbjct: 230 TDGFSDALDKLIELIDTLTDKGIKLQHIDLGGGLGVRYIDENPVSIDQVATVLLPRLKQL 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLL---YQESATI 281 +++YLEPG ++V N L TTV + IVD+S+ + L Sbjct: 290 GLKLYLEPGRSLVANAGVLLTTVDVLKPTEFKNFAIVDASMSELIRPALYESQMAIIPAK 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T V G C + D G+ +++GD ++ Y + +N P Sbjct: 350 LSRDTAKTWDVVGTVCESSDFLGKDRILS-LQVGDTLAVTGAGAYGFSMACNYNTRPRPC 408 Query: 342 IAVKNVDGTIKAIREFSYNDY 362 + N + + +D Sbjct: 409 EVMVNHGTHRLIRKREALDDL 429 >gi|254483250|ref|ZP_05096482.1| diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2148] gi|214036473|gb|EEB77148.1| diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2148] Length = 416 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 113/385 (29%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + A+K + + DTL + G S E Sbjct: 26 GTPCYIYSRAGLEGAFRQYQDALAGCEHLVCYAVKANSNLAVLDTLARLGAGFDIVSAGE 85 Query: 63 V-MLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + ++ D A+ + + ++L A K Sbjct: 86 LHRVIAAGGDPGKVVFSGVGKKPDEMAQALELDIACFNLESAAELEVLAGVAAHAGKTAR 145 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 +R+NP V ++ G ++ + + V G+ H + Sbjct: 146 VSVRVNPDVDAQTHPYISTGLRENKFGVTMEEALLVYQRAAKLPNIEVVGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC---QRLKEFSEK 224 F LK + E + + LGGG+ KD ++E Sbjct: 206 QISPFIDALKRLLALIDELAEQGIVLRHLDLGGGLGVCYKDEEPPSIAQYVAAVREELGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283 +Q+ EPG +I N L TTV + + VD+++ + L Sbjct: 266 RPLQLVFEPGRSIAANAGLLLTTVEYLKTTPDHNFALVDAAMNDMIRPALYQAWLDIRNT 325 Query: 284 NTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + V G C GD G+ ++ GD ++ Y + +N Sbjct: 326 RENNVGQSASWDVVGPVCETGDFLGKQRQLS-LQQGDLLALFGAGAYGFTMSSNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + + S D Sbjct: 385 AAEVMVDGEKVHLVRERESIADIIR 409 >gi|73542823|ref|YP_297343.1| diaminopimelate decarboxylase [Ralstonia eutropha JMP134] gi|72120236|gb|AAZ62499.1| diaminopimelate decarboxylase [Ralstonia eutropha JMP134] Length = 419 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 54/387 (13%), Positives = 111/387 (28%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L K ++ A+K + + + G S E Sbjct: 27 GTPAYVYSRAALTAAYQGYAAACKGRKAQVQYAMKANSNLAVLQVFAKLGAGFDIVSGGE 86 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ A+ + ++ +L++ A ++ K+ Sbjct: 87 LKRVLAAGGDPRKVVFSGVGKNAAEMELALAHDVRCFNVESIPELDRLNAVAGQIGKRAR 146 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 LRINP V ++ G +D + + V G+ H + Sbjct: 147 VSLRINPDVDAKTHPYISTGLKGNKFGIAFEDVLPTYRAAAALPNIEVTGIDCHIGSQIT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + L ++ + +E I +GGG+ T D D ++ Sbjct: 207 EVAPYLEALDKVLDVVEALEREGIVLEHIDVGGGLGITYTDETPPDITGFATTLLDRVAA 266 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278 ++ EPG ++V N L T V + + D+++ + Sbjct: 267 RGHAHREVLFEPGRSLVGNAGVLLTQVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHRI 326 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G C +GD G V+ GD ++ Y + +N Sbjct: 327 EPVKANGGSQVVYDIVGPVCESGDWLGRDRALA-VQPGDLLAVMSAGAYGFVMSSNYNTR 385 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 386 PRAAEVMVDGGKVHLVRERELVEDLFR 412 >gi|149181673|ref|ZP_01860166.1| diaminopimelate decarboxylase [Bacillus sp. SG-1] gi|148850651|gb|EDL64808.1| diaminopimelate decarboxylase [Bacillus sp. SG-1] Length = 435 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 67/399 (16%), Positives = 133/399 (33%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + +N G ++ A K F++ +F +N+ S Sbjct: 30 GTPLYIYDVELIRERARGFKNTFENLGIKAQVAYASKAFSSVAIFQLMNEEGLSLDVVSG 89 Query: 61 YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ ++ A+ N I+ + +L +D + + + Sbjct: 90 GELFTAVKAGFPAERIHFHGNNKSEEELRMALEHNIGCIVVDNFYELQLLEDVCKDMGQS 149 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + +R+ P + + S+ G E ++S NV GL H Sbjct: 150 MDILIRVTPGIEAHTHDYILTGQEDSKFGFGLENGQTEEALLRGVKSAHLNVLGLHCHIG 209 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + F ++ + E ++LGGG + Sbjct: 210 SQIFETTGFVLAASKIIGKLADWKDKHGYVAEVLNLGGGFGIRYTAEDDPIAPSQYVEEI 269 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 +K+ +E++ +I++EPG ++V + T +V E VD + ++ Sbjct: 270 ISEVKKKAEEFNLDMPEIWIEPGRSLVGDAGTTLYSVGSAKEVPNIRKYLAVDGGMSDNI 329 Query: 270 PDYLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N + G+ C +GD+ GD ++ Sbjct: 330 RPALYEAKYEAILANKAGQPVHETVSIAGKCCESGDMLIWDLPLPESSQGDILAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + T +R S+ D Sbjct: 390 YGYSMANNYNRIPRPPVVFVENGKTKLVVRRESFEDLLK 428 >gi|192293581|ref|YP_001994186.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris TIE-1] gi|192287330|gb|ACF03711.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris TIE-1] Length = 421 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 56/389 (14%), Positives = 105/389 (26%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSSATLERHYRVFTEAFAGLDALVCYAMKANSNQSVLRTLAKLGAGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ K D + + +L + A + + Sbjct: 85 ELQRALAAGIPPSKIVFSGVGKTEAELRAALAHDIKCLNVESEPELEQLSRIAVETGRTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 LR+NP V + ++ G + E + V G+ H + Sbjct: 145 RISLRVNPDVDSGTHAKISTGKSENKFGIPIRHAREVYARAAKLPGIQVTGVDVHIGSQI 204 Query: 170 KSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 + + + GGG+ + + + +K Sbjct: 205 VDLAPMEAAFRKVAEFIHVLRGDGHTVSHVDFGGGLGIPYYEDRDAPPEPFAYAEMVKRV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + EPG IV N L V+ + + K VI+D+++ + L Sbjct: 265 THNLGCTLLFEPGRMIVGNAGILVAKVIYVKHGDGKTFVIIDAAMNDLIRPTLYEAYHEI 324 Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I A V G C GD +K GD I+ Y + +N Sbjct: 325 IAVQQPAPGVATMVADVVGPVCETGDYLALDRKLPELKAGDLIAIMTAGAYGAVQACTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D Sbjct: 385 TRALVPEVLVKDDQVAVVRPRIEVEQLIA 413 >gi|27366317|ref|NP_761845.1| carboxynorspermidine decarboxylase [Vibrio vulnificus CMCP6] gi|320156826|ref|YP_004189205.1| carboxynorspermidine decarboxylase [Vibrio vulnificus MO6-24/O] gi|27362518|gb|AAO11372.1| carboxynorspermidine decarboxylase [Vibrio vulnificus CMCP6] gi|319932138|gb|ADV87002.1| carboxynorspermidine decarboxylase putative [Vibrio vulnificus MO6-24/O] Length = 377 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 168/368 (45%), Positives = 242/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP+++ID+ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+EKFGGETHAY+V Y + ++ V CD IIFN+ SQL + + IGLR Sbjct: 66 EVKLGYEKFGGETHAYSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVEGKA-SIGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + + ++NG+MFH NCENK F A+L + Sbjct: 125 LNPGVSYASQDLANPARQFSRLGVQADHIDPAVFDSINGVMFHMNCENKDVDAFIALLDS 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+S+GGG+ FT Y V+ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 185 ISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+D+ EN IVDS+ EAH D L+Y+E A++ G + ++ SCLA Sbjct: 245 TDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+ +G R+ D AGY + + NWFNG+ MP++ + +G I+ + EF Y Sbjct: 305 GDQFCVAKFDQPLHVGQRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEIQKLNEFGY 364 Query: 360 NDYYNNLS 367 D+ +LS Sbjct: 365 EDFKRSLS 372 >gi|319791909|ref|YP_004153549.1| diaminopimelate decarboxylase [Variovorax paradoxus EPS] gi|315594372|gb|ADU35438.1| diaminopimelate decarboxylase [Variovorax paradoxus EPS] Length = 422 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 55/388 (14%), Positives = 114/388 (29%), Gaps = 26/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ KQ +L+ L + + A+K ++ G+ + G S E Sbjct: 33 GTPLFVYSKQWMLDALAAYQRGFEGRDALICYAMKANSSLGVLRVFAEAGCGFDIVSGGE 92 Query: 63 VMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ + + ++L+ + A Sbjct: 93 LARVLAVGADPKKIIFSGVGKTRAEMRQALAAGIACFNVESEAELDVLNEVALAEGGRAP 152 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I +RINP+V ++ G +E+ V G+ H + Sbjct: 153 ISIRINPNVDPKTHPYISTGLKGNKFGIAHDRAVEAYRHAARLPGLEVVGIDCHIGSQIT 212 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS- 226 + ++ + I + GGG+ ++ K Sbjct: 213 EASPYLDACDRILDLVEAIEAAGVPIHHLDFGGGLGIDYNGEVPPKADDLWQQLLAKLDA 272 Query: 227 -----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278 ++ +EPG ++V N T VL + D+++ + Sbjct: 273 RGFGARKLVIEPGRSLVGNAGVCVTEVLYTKPGEDKNFCIVDAAMNDLPRPAMYQAFQKI 332 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T V G C +GD G + GD ++ Y ++ + +N Sbjct: 333 VPLRIRTGEAPTYDVVGPVCESGDWIGRDRALNVL-AGDLLAVLSAGAYCMSMSSNYNTR 391 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + R + D N Sbjct: 392 PRAAEVLVSGQSATLIRRRETMEDQLRN 419 >gi|145630464|ref|ZP_01786244.1| diaminopimelate decarboxylase [Haemophilus influenzae R3021] gi|144983854|gb|EDJ91296.1| diaminopimelate decarboxylase [Haemophilus influenzae R3021] Length = 415 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 DTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L + Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D + R + + Sbjct: 385 RTAEVLVDRDKSYLIRRRETLQEL 408 >gi|297529532|ref|YP_003670807.1| diaminopimelate decarboxylase [Geobacillus sp. C56-T3] gi|297252784|gb|ADI26230.1| diaminopimelate decarboxylase [Geobacillus sp. C56-T3] Length = 439 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 121/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + GV+ + A K F+A + + S Sbjct: 30 GTPLYIYDVALIRARARAFKEAFQRHGVRAQVAYASKAFSAVAIVQLAAEEGLSLDVVSG 89 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F E ++ K + A+ I+ + +L ++ A+ Sbjct: 90 GELYTALAAGFPPERIHFHGNNKSRDELAMALEHGIGCIVADNFYELELIEELAESSGRT 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LR+ P V + S+ G E + + S + G+ H Sbjct: 150 VPVLLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEAFRRVMASAAFQLLGVHCHIG 209 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------- 215 + F + + + ++LGGG + Sbjct: 210 SQIFETAGFVLAAQKVFAKLAEWNKAHGFVPAVVNLGGGFGIRYTEEDDPIPVTAYVDCI 269 Query: 216 -QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K +E +I++EPG ++V + T T+ E + + ++ Sbjct: 270 VEEVKRQAEACRLPLPEIWIEPGRSLVGDAGTTIYTIGSRKEVPNVRTYIAVDGGMSDNI 329 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + G+ C +GD+ K GD ++ Sbjct: 330 RPALYGAKYEAALANRVFGEPTEVVSIAGKCCESGDMLIWDIALPEAKPGDYLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N + P + ++ +Y D Sbjct: 390 YGYSMANNYNRLPRPAVVFVENGDAQLVVKRETYEDLIQ 428 >gi|261417864|ref|YP_003251546.1| diaminopimelate decarboxylase [Geobacillus sp. Y412MC61] gi|319767324|ref|YP_004132825.1| diaminopimelate decarboxylase [Geobacillus sp. Y412MC52] gi|261374321|gb|ACX77064.1| diaminopimelate decarboxylase [Geobacillus sp. Y412MC61] gi|317112190|gb|ADU94682.1| diaminopimelate decarboxylase [Geobacillus sp. Y412MC52] Length = 439 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 121/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + GV+ + A K F+A + + S Sbjct: 30 GTPLYIYDVALIRARARAFKEAFQRHGVRAQVAYASKAFSAVAIVQLAAEEGLSLDVVSG 89 Query: 61 YEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F E ++ +D A+ I+ + +L ++ A+ Sbjct: 90 GELYTALAAGFPPERIHFHGNNKSRDELAMALEHGIGCIVADNFYELELIEELAESSGRT 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LR+ P V + S+ G E + + S + G+ H Sbjct: 150 VPVLLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEAFRRVMASAAFQLLGVHCHIG 209 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------- 215 + F + + + ++LGGG + Sbjct: 210 SQIFETAGFVLAAQKVFAKLAEWNKAHGFVPAVVNLGGGFGIRYTEEDDPIPVTAYVDCI 269 Query: 216 -QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K +E +I++EPG ++V + T T+ E + + ++ Sbjct: 270 VEEVKRQAEACRLPLPEIWIEPGRSLVGDAGTTIYTIGSRKEVPNVRTYIAVDGGMSDNI 329 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + G+ C +GD+ K GD ++ Sbjct: 330 RPALYGAKYEAALANRVFGEPTEVVSIAGKCCESGDMLIWDIALPEAKPGDYLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N + P + ++ +Y D Sbjct: 390 YGYSMANNYNRLPRPAVVFVENGDAQLVVKRETYEDLIQ 428 >gi|254515502|ref|ZP_05127562.1| diaminopimelate decarboxylase [gamma proteobacterium NOR5-3] gi|219675224|gb|EED31590.1| diaminopimelate decarboxylase [gamma proteobacterium NOR5-3] Length = 414 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 115/384 (29%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ + + L+ K + A+K + + D L + G S+ E Sbjct: 25 GTPCYVYSRKAMESALEEYHKALKGCEHLVCYAVKANSNIAVLDILARCGAGFDIVSVGE 84 Query: 63 V-MLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ D A+ + ++L + A +L Sbjct: 85 LERVIAAGGDPGKVVFSGVVKRPDEMRRALQVGIRCFNVESEAELEVLQAVAAQLQVQAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE-- 168 + +R+NP V ++ G + +V GL H + Sbjct: 145 VSVRVNPDVDAGTHPYISTGLRENKFGVATDAAMALLRRAKTLSNIDVTGLDCHIGSQLI 204 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---KEFSEK 224 L L + I + LGGGI +D + +E Sbjct: 205 DMSPLLDALQQLLLMVDTLEAEGIHIRHLDLGGGIGVRYRDEQPPAVADYIAAVREALGD 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE---SAT 280 + + EPG +IV N L T V + E + VD+++ + L T Sbjct: 265 RDLALVFEPGRSIVANAGVLLTRVHYLKETDAHSFALVDAAMNDFIRPALYQAWVDIQPT 324 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + P V G C GD G+ + ++ Y + +N Sbjct: 325 GPSDAEPRLWNVVGPVCETGDFLGKDRELA-IAPDTLLAIHGAGAYGFVMSSNYNTRPRA 383 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + D Sbjct: 384 AEVMIDGDSAHLIRERETIEDLLR 407 >gi|226938955|ref|YP_002794026.1| DcdA [Laribacter hongkongensis HLHK9] gi|226713879|gb|ACO73017.1| DcdA [Laribacter hongkongensis HLHK9] Length = 417 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 57/387 (14%), Positives = 119/387 (30%), Gaps = 25/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + ALK + + G + S+ E Sbjct: 26 GTPCYVYAESALTQAYSAYSNAFAGMPHLVCYALKANSNLSVIRHFASLGAGFDTVSIGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ +V++L + A++L Sbjct: 86 IERVLAAGGEAGKIVFSGVGKSAAEMRRALEIGIHCFNVESVNELERLDTVARELGKRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCE-- 168 + LRINP+V ++ G + E +V G+ H + Sbjct: 146 VSLRINPNVDARTHPYISTGLKNNKFGIAYDIARQSYRRAAELPNLDVIGIDCHIGSQLT 205 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + + L + + ++ + +GGG+ D ++ + ++E Sbjct: 206 DSTPLIDALDRLLVLVDQLSEDGIRLRHVDIGGGLGIRYADETPPDLQQYADAIRERLAG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG ++V N L T V + E + K+ +VD+++ + Sbjct: 266 RDLALLMEPGRSLVGNAGVLLTRVEYLKEGDGKHFAVVDAAMNDLMRPSYYQAFHDIRPV 325 Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 V G C + D G+ ++ GD I+ Y + +N Sbjct: 326 TQHDAELLPALYDVVGPICESSDFLGKDRALA-LREGDLIAVMSSGAYGSTMSSNYNTRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNN 365 + N ++ N Sbjct: 385 RAAEVLVNGRHVRLVRARETFEQLIAN 411 >gi|148652160|ref|YP_001279253.1| diaminopimelate decarboxylase [Psychrobacter sp. PRwf-1] gi|148571244|gb|ABQ93303.1| diaminopimelate decarboxylase [Psychrobacter sp. PRwf-1] Length = 445 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 67/388 (17%), Positives = 126/388 (32%), Gaps = 24/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ KQ +L+ ++ A+K + + L + G S E Sbjct: 54 GTPLYVYSKQAILDAYTAYTTSFAAIDHQVCYAVKANSNLAVLSVLAKAGAGFDLVSSGE 113 Query: 63 VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + ++ K A+ + ++S+L+ A +L+ Sbjct: 114 LARVLAVGADPSKIVFSGVGKTVTELTAALKAGIGCFNVESLSELDTLNAVAAELNVKAP 173 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 I +R+NP V ++ G E + G+ H + Sbjct: 174 ISIRVNPDVDAKTHPYISTGLKDNKFGISHDIAVAAYQHAASLEHLQIVGIDCHIGSQLT 233 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 F A L + + +++ I LGGG+ D V +F L ++ Sbjct: 234 EIDPFVAALDKVCELIEALKQVGIELQHIDLGGGLGVIYIDEEVAKVSEFAAALLPKLQE 293 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283 ++++ EPG +IV N L T V + IVD+++ + L E A I Sbjct: 294 LGLKVFFEPGRSIVANAGMLVTKVEVLKPTEHRDFAIVDAAMNDLIRPALYQAEMAVIPV 353 Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + + G C GD + + +GD ++ Y + +N Sbjct: 354 QTASQASQKSWDIVGAVCETGDFLAKKRLLS-LAVGDILAITGAGAYGFVMSSNYNSRPR 412 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNLS 367 P + + D + + S Sbjct: 413 PAEVMVSGDKHQVVRARETVAQLFETES 440 >gi|187735226|ref|YP_001877338.1| diaminopimelate decarboxylase [Akkermansia muciniphila ATCC BAA-835] gi|187425278|gb|ACD04557.1| diaminopimelate decarboxylase [Akkermansia muciniphila ATCC BAA-835] Length = 429 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 65/397 (16%), Positives = 120/397 (30%), Gaps = 36/397 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ KQ +LN+ ++ A+K + + + + + G S E+ Sbjct: 27 TPLYVYSKQTILNHFHRLREALAPLNAEVAYAVKACSNIAILNLMARNGAGFDIVSGGEL 86 Query: 64 -MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHKKI 118 + Y K + + ++L A + + Sbjct: 87 FRVLKAGGDPSKCTYAGVGKTEQEIRYALAQGIYCFNVESEAELRAINAIAASMGVKAPV 146 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENK 170 +R+NP+V + ++ G + ++ GL H + Sbjct: 147 AVRVNPNVEAGTHKYITTGKAENKFGVDFERIESLYEMAARELPNLHLKGLQMHIGSQLT 206 Query: 171 SFLCFSAMLKNIEKEFG--HFITQIEWISLGGGIHFTD-----------KDYPVKD---- 213 F ++ + IE+ S+GGGI + Sbjct: 207 QAKPFLEAVRKVAPLAASLKEKHGIEFFSIGGGIGIVYQGTLDSGVQEWWNEDCAQLTLS 266 Query: 214 -FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPD 271 + Q + + + I +EPG IV N L T L K IVD+ + + Sbjct: 267 TYAQAVVPTLQPLGLHIIVEPGRLIVGNAGALITRCLYEKNGKAKTFKIVDAGMNDLIRP 326 Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L I P TA V G C +GD + V+ G+ ++ Y Sbjct: 327 ALYQGYHEIIPVREHPSGSCVTADVVGPICESGDFLAQNRDMPDVRQGELLAVLSAGAYG 386 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N M + + D S+ D Sbjct: 387 FSMSSNYNSRPMAEEVLVDGDQWNVIRSRQSWEDLIR 423 >gi|167647175|ref|YP_001684838.1| diaminopimelate decarboxylase [Caulobacter sp. K31] gi|167349605|gb|ABZ72340.1| diaminopimelate decarboxylase [Caulobacter sp. K31] Length = 432 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 68/390 (17%), Positives = 124/390 (31%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSS 58 + TP Y+ + L + AGV + A+K + + L G + Sbjct: 36 VGTPVYVYSRATLERHFTVFRDALLAAGVIDPLIAYAVKANSNVAVLKVLGNLGAGADTV 95 Query: 59 SLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL- 114 S EV GE ++ K A + I + +LN A +L Sbjct: 96 SEGEVRRALAAGIPGERIVFSGVGKKRGEIAFALRAGVAEINVESEPELNLIAAVAAELG 155 Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNN 166 K+ R+NP V+ + ++ G + S N+ G+ H Sbjct: 156 VKAKVAFRVNPDVAAGGHAKIATGKSENKFGVSFAEAARLYANASNNANLEPIGVACHIG 215 Query: 167 CENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD----FCQRLK 219 + + +E + LGGG+ D P F + Sbjct: 216 SQITDLSPMRQAFTKMRGLVEQLLGEGLHVERLDLGGGLGVPYFDMPEPPSPADFAAMVG 275 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVEAHVPDYLLYQE 277 E ++ V++ EPG I N L + V+ + E + +++D+++ + + Sbjct: 276 EVTQGLPVKLAFEPGRVIAANAGVLVSEVIHVHERPEGKRFLVIDAAMNDLIRPAMYDAF 335 Query: 278 SA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + G V G C GD F P+ GD ++F Y + +N Sbjct: 336 HDIRPLIKRAGETVYDVVGPICETGDTFTRDRALPPLAAGDLVAFMSAGAYGAAMASEYN 395 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D SY + Sbjct: 396 TRPLVPEVLVDGDTFAVIRARPSYEEILAR 425 >gi|241759521|ref|ZP_04757624.1| diaminopimelate decarboxylase [Neisseria flavescens SK114] gi|241320078|gb|EER56439.1| diaminopimelate decarboxylase [Neisseria flavescens SK114] Length = 406 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 127/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L + + A+K + G S E Sbjct: 18 GTPLYVYSKSALTEAFENYQTAFAALNPLVCYAVKANGNLSIIKYFASLGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G +T V + EI+ A+ + ++ ++++ + A +L K Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIRKVAARLGKVAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHASRQSHLKIVGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I + +E + LGGG+ +D + + + +++ Sbjct: 198 DLSPLVEACERILALVDQLVAEGIVLEHLDLGGGVGIVYQDENVPDLGAYAKEVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N L T V + KN V+VD+++ + L Sbjct: 258 RRLKLVLEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T TA + G C GD G+ + GD + Y + + +N N Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGSSMASNYNTRNRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + + N Sbjct: 377 AEVLVDGSECKLIRQRETIEQQMAN 401 >gi|57234679|ref|YP_181278.1| diaminopimelate decarboxylase [Dehalococcoides ethenogenes 195] gi|57225127|gb|AAW40184.1| diaminopimelate decarboxylase [Dehalococcoides ethenogenes 195] Length = 434 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 61/399 (15%), Positives = 118/399 (29%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ + N A + A K F + L + S Sbjct: 34 GTPLYVFDEATIRQNCRDFKREFSRRYADSSVSYASKAFLHPALLKILAEEGMSLDVVSG 93 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ + F + ++ K D A+ + I+ ++ ++ A + Sbjct: 94 GELSIASSAGFPMDMVYFHGNNKSADELRLALRLHVGRIVVDSFDEIKLLSKLADESGHI 153 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168 I LR+ P V + S+ G E+ N+ G FH + Sbjct: 154 PDILLRLTPGVDAHTHHHITTGKLDSKFGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQ 213 Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------ 218 +L+ + + IE + +GGG + Sbjct: 214 IFETQPFLDAIDLVLEFAAQVQERYGFDIEELDIGGGYGVQYEVDKPAPQVSVYAEAIGA 273 Query: 219 -----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + + +EPG A++ TV I + V + ++ Sbjct: 274 KIVSKCHSLKLTPPSLNIEPGRAVIAQAGVALYTVGVIKDIPGIRVYASVDGGMGDNIRP 333 Query: 272 YLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + + ++ V G+ C +GDI +K GD ++ Y Sbjct: 334 ALYEAKYEAVVANNVQSSEKQKVTVAGKFCESGDILITDIELPVLKTGDILAVPCCGAYC 393 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + + +NG P + + R + D + L Sbjct: 394 LPMSSNYNGYQRPAVVMLKNGEDRLIRRRETVEDL-SRL 431 >gi|153008332|ref|YP_001369547.1| diaminopimelate decarboxylase [Ochrobactrum anthropi ATCC 49188] gi|151560220|gb|ABS13718.1| diaminopimelate decarboxylase [Ochrobactrum anthropi ATCC 49188] Length = 421 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 65/389 (16%), Positives = 123/389 (31%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + ALK + + TL + G + S Sbjct: 25 VGTPFYVYSRATIERHFRVFSEAFAGMETLVTYALKANSNLAVLKTLAKLGAGADTVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNV-AYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E+ ++ E+D A+ + + +L +A K K Sbjct: 85 EIRRALAAGIPANKIVFSGVGKTPHEMDFALEAGIYCFNVESEPELEILSARAVKAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G E+ + +V G+ H + Sbjct: 145 SVSLRINPDVDAKTHAKISTGKSENKFGIPRVKAREAYARAASLPGLDVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + + E I + +GGG+ + + + + + Sbjct: 205 IDLEPFDNAFALMAQLVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPLPVAYAEIVAKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + ++ EPG IV N L T V+ + E + KN VIVD+++ + L Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + A G C GD G GD I+ Y + +N Sbjct: 325 KPVTLPKDDAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAVCTTGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D +Y + Sbjct: 385 SRLLIPEVLVDGDRYHVVRPRRTYEELLA 413 >gi|323519139|gb|ADX93520.1| diaminopimelate decarboxylase [Acinetobacter baumannii TCDC-AB0715] Length = 407 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 121/389 (31%), Gaps = 26/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + ++ A+K + + + L + G S E Sbjct: 16 GTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGE 75 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K N + ++L++ + A +L Sbjct: 76 LARVLKAGGDASKIVFSGLGKTEADIETSLNVGIACFNVESYAELDRIQKVAARLGKKAP 135 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167 I LR+NP V ++ G + G+ H Sbjct: 136 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYETYQYAASLPNLEIVGIDCHIGSQLT 195 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 E K F+ + + E ++ I +GGG+ KD ++ +K EK Sbjct: 196 ETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 255 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279 +++Y+EPG +I N L T V L +N I+D+++ + L Sbjct: 256 LGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPV 315 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 +T T + G C GD G+ ++ D ++ Y + +N Sbjct: 316 VPRTDTEEKTWDLVGAICETGDFIGKDRSLA-LQENDLLTVLGAGAYGFVMSSNYNTRGR 374 Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366 + + + + + L Sbjct: 375 AAEVMVSGEKSYLIRERETVESLWEKERL 403 >gi|169632675|ref|YP_001706411.1| diaminopimelate decarboxylase [Acinetobacter baumannii SDF] gi|169795020|ref|YP_001712813.1| diaminopimelate decarboxylase [Acinetobacter baumannii AYE] gi|184159195|ref|YP_001847534.1| diaminopimelate decarboxylase [Acinetobacter baumannii ACICU] gi|213158317|ref|YP_002320368.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB0057] gi|215482568|ref|YP_002324760.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB307-0294] gi|301345397|ref|ZP_07226138.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB056] gi|301511589|ref|ZP_07236826.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB058] gi|301594791|ref|ZP_07239799.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB059] gi|332854282|ref|ZP_08435282.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6013150] gi|332865658|ref|ZP_08436484.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6013113] gi|332876024|ref|ZP_08443810.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6014059] gi|169147947|emb|CAM85810.1| diaminopimelate decarboxylase [Acinetobacter baumannii AYE] gi|169151467|emb|CAP00216.1| diaminopimelate decarboxylase [Acinetobacter baumannii] gi|183210789|gb|ACC58187.1| Diaminopimelate decarboxylase [Acinetobacter baumannii ACICU] gi|193078108|gb|ABO13049.2| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 17978] gi|213057477|gb|ACJ42379.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB0057] gi|213986285|gb|ACJ56584.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB307-0294] gi|322509109|gb|ADX04563.1| lysA [Acinetobacter baumannii 1656-2] gi|332728098|gb|EGJ59487.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6013150] gi|332735179|gb|EGJ66259.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6013113] gi|332735890|gb|EGJ66931.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6014059] Length = 416 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 121/389 (31%), Gaps = 26/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + ++ A+K + + + L + G S E Sbjct: 25 GTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGE 84 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K N + ++L++ + A +L Sbjct: 85 LARVLKAGGDASKIVFSGLGKTEADIETSLNVGIACFNVESYAELDRIQKVAARLGKKAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167 I LR+NP V ++ G + G+ H Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYETYQYAASLPNLEIVGIDCHIGSQLT 204 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 E K F+ + + E ++ I +GGG+ KD ++ +K EK Sbjct: 205 ETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279 +++Y+EPG +I N L T V L +N I+D+++ + L Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 +T T + G C GD G+ ++ D ++ Y + +N Sbjct: 325 VPRTDTEEKTWDLVGAICETGDFIGKDRSLA-LQENDLLTVLGAGAYGFVMSSNYNTRGR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366 + + + + + L Sbjct: 384 AAEVMVSGEKSYLIRERETVESLWEKERL 412 >gi|254508819|ref|ZP_05120930.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus 16] gi|219548276|gb|EED25290.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus 16] Length = 417 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 55/378 (14%), Positives = 108/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWNAFDKSVGDHPHLVCYAVKANSNLGVLNALARIGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGDASKVVFSGVGKTEQEMQRALELGIKCFNVESEPELERLNKVAGQLGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V + ++ G +V G+ H + Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYQFAASLENLDVKGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + I+ + +GGG+ P L Sbjct: 207 DIEPFIDATDRLLALIDDLKEQGIDIKHLDVGGGLGVVYRDEMPPEPSDYAKALLSRLDN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HKHLELIFEPGRAIAANAGILLTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G C GD G+ ++ D ++ Y + +N Sbjct: 327 VAPREGEATEYDLVGPICETGDFLGKDRRLV-LEENDLLAVRSAGAYGFVMSSNYNTRVR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + D + + Sbjct: 386 AAEVMVDGDQSHLVRQRE 403 >gi|93005050|ref|YP_579487.1| diaminopimelate decarboxylase [Psychrobacter cryohalolentis K5] gi|92392728|gb|ABE74003.1| diaminopimelate decarboxylase [Psychrobacter cryohalolentis K5] Length = 443 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 118/385 (30%), Gaps = 28/385 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ KQ +L+ + ++ A+K + + L Q G S E Sbjct: 49 GTPCYVYSKQAILDVYQAYTDSFASLTHQICYAVKANSNLAVLGVLAQAGAGFDIVSRGE 108 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 +M ++ K ++S+L + A +L K Sbjct: 109 LMRVLAAGGEATRVVFSGVGKTYSDIEYALNQGIGCFNVESISELTLINEVAAQLDKSAP 168 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G +D + ++ G+ H + Sbjct: 169 ISLRVNPDVDAKTHPYISTGLKDNKFGIAHEDALVVYQQAAKLSHIDIVGIDCHIGSQLT 228 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 F A L + ++ I LGGG+ D +F L + Sbjct: 229 EVAPFVAALDKVIELVHSLRKAGIELRHIDLGGGLGVRYIDETPVSIDEFANALLPKLSE 288 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281 + ++ EPG +IV N L T V + IVD+++ + L E A I Sbjct: 289 LGLTVFFEPGRSIVANAGVLLTKVDVLKPTEHKNFAIVDAAMNDLIRPALYQAEMAVIPN 348 Query: 282 ------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + G C GD + + GD ++ Y + +N Sbjct: 349 VLPSNGINTESTEPWDIVGAICETGDFLAKDRLLS-LSTGDILAITGAGAYGFTMSSNYN 407 Query: 336 GINMPTIAVKNVDGTIKAIREFSYN 360 + + D + + Sbjct: 408 SRPRASEVMVADDRHQLIRKRETVE 432 >gi|297171019|gb|ADI22033.1| diaminopimelate decarboxylase [uncultured myxobacterium HF0200_05J13] Length = 420 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 72/381 (18%), Positives = 122/381 (32%), Gaps = 24/381 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + ++ K+ + A+K A + D L Q G + S+ E Sbjct: 26 GTPTYVYSKATISRHVRVLQEALKDLPHLICYAVKANANLAILDLLQQLGCGFDAVSVGE 85 Query: 63 VMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119 + +T V +D EIDA LS I + +L D A K + + Sbjct: 86 LARVSHIGASPAKTIVSGVGKRDDEIDAALSADVLYICAESREELEAIGDIAAKRNTRAR 145 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170 +R+NP V ++ G + IE + G+ H + Sbjct: 146 VSIRVNPDVDAKTHPYIATGMNKNKFGVPIERAIELYQHGLTIPSIELVGVTCHIGSQVT 205 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224 F + + + +++I +GGG+ L + Sbjct: 206 ELSPFIDAAERMVELTRNLRALGAPLQFIGMGGGLGIPYGSETPPSPADYGQALSKLLGA 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283 + + LEPG IV N L + V+ E + +D+ + + LYQ I Sbjct: 266 LGLTVILEPGRVIVGNAGILLSRVVRTKEGAERRFALIDAGMNDLIRPA-LYQAHHQIEA 324 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P V G C + D F E ++ GD I+ Y +NG Sbjct: 325 VAAPSDEREIIDVVGPVCESADTFAEQAEFTKLEPGDLIAIRSAGAYGFVMACNYNGRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYN 360 P + + Sbjct: 385 PAEVLCTGSTKQLIRARETLE 405 >gi|301169445|emb|CBW29045.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus influenzae 10810] Length = 415 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L + Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D + R + + Sbjct: 385 RTAEVLVDRDKSYLIRRRETLQEL 408 >gi|23015819|ref|ZP_00055585.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 424 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 114/392 (29%), Gaps = 26/392 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP+Y L + K+AG + A K + T Q G S Sbjct: 25 VGTPFYCYSTATLERHYTVFAEALKSAGLDATICFAAKANPNMAVIRTFAQLGAGADVVS 84 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKL 114 E+ ++ K I + +L + A + L Sbjct: 85 EGELRQALAAGVPAARIVFSGVGKTRHELEFAVAKGIFQINVESEPELEMLSEVAAARGL 144 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-----KNVNGLMFHNNCEN 169 I +R+NP V + ++ G + E V + + + Sbjct: 145 VMPIAIRVNPDVDAGTHAKITTGKKENKFGIEWTRAREVYARAKALPGVEPVSIACHIGS 204 Query: 170 K-----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEF 221 + F ++++ I + LGGG+ D + + + +K Sbjct: 205 QLTELDPFREAFLRVRDLVAMLRADGIDIRRLDLGGGLGVPYDDETPPEPKAYAEVIKAS 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280 + EPG +V N L ++++ + E IVD+++ L + Sbjct: 265 LGDLGCRFIFEPGRLLVGNAGILVSSIIRVKEGSTRTFLIVDAAMNDLARPSLYDAYHSI 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 V G C GD F P++ GD ++ Y + +N Sbjct: 325 FPVAEPKAGAPLAEVDVVGPVCETGDTFARQRRLPPMRAGDLLALGTAGAYGAAMSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + SY D + S Sbjct: 385 TRPLIPEVLVKGADYAVIRARPSYEDMRSLES 416 >gi|293609896|ref|ZP_06692198.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828348|gb|EFF86711.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 416 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 121/386 (31%), Gaps = 24/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + ++ A+K + + + L + G S E Sbjct: 25 GTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGE 84 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K N + ++L++ + A Sbjct: 85 LARVLKAGGDASKVVFSGLGKTEADIETSLNVGIACFNVESYAELDRLQKVAARIGKKAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167 I LR+NP V ++ G + G+ H Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYETYQYAASLPNLEIIGIDCHIGSQLT 204 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 E K F+ + + +E ++ I +GGG+ KD ++ +K EK Sbjct: 205 ETKPFVDALDRVMLMIEELKKLGITLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279 +++Y+EPG +I N L T V L + +N I+D+++ + L Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTSHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 +T T + G C GD G+ +K D ++ Y + +N Sbjct: 325 VPSSDTEEKTWDLVGAICETGDFIGKDRSLA-LKENDLLAVLGAGAYGFVMSSNYNTRGR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 + + D + + N Sbjct: 384 AAEVMVSGDKAHLIRERETVESLWEN 409 >gi|187736145|ref|YP_001878257.1| carboxynorspermidine decarboxylase [Akkermansia muciniphila ATCC BAA-835] gi|187426197|gb|ACD05476.1| carboxynorspermidine decarboxylase [Akkermansia muciniphila ATCC BAA-835] Length = 400 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 115/398 (28%), Positives = 190/398 (47%), Gaps = 38/398 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++I L N + AG ++ LALK F+ W F+ L+ ++DG +S L+E L Sbjct: 3 AFIISLPALERNALILRDVADAAGCRIALALKGFSCWPCFEALSPWLDGCCASGLWEARL 62 Query: 66 GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK------IG 119 +FG Y+ + EI + + FN+++Q ++F+++ + + G Sbjct: 63 ARRRFGKHVLTYSPGHAPEEIAELAEISSHLDFNSLTQWSRFREEVMRHPRFVSGELKCG 122 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LR+NP S + DP P SRLG +++ ++GL FH CE + M Sbjct: 123 LRVNPQCSTGHTPIYDPCAPGSRLGVTPDMMQGADLSGISGLHFHTLCEQGADDLAVTM- 181 Query: 180 KNIEKEFGHFI--TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 + +E+ FGH + +I W+++GGG T DY K ++ E+Y V+++LEPGEA Sbjct: 182 EAVERHFGHLLSRPEISWLNMGGGHWITKPDYDRKLLAALIRRIRERYGVEVWLEPGEAA 241 Query: 238 VTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPN------------ 284 +T L VLD+ N I+D S AH+PD L ++ Sbjct: 242 AIHTGVLRCRVLDLFSAEGVNHAILDVSASAHMPDTLEMPYRPDVFQIAGDASLRSAQQP 301 Query: 285 ----------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 YT + +CLAGD G++ F +P+ +GD + F+D+A Y + Sbjct: 302 AVRLEGESYALAGKAGEKAYTYRLGAPTCLAGDRLGDYSFAEPLAVGDELVFDDMAHYTM 361 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + +FNG+ P IAV+ DG+++ +R FSY D+ L Sbjct: 362 VKTTFFNGVRHPDIAVQRKDGSVETVRRFSYEDFEARL 399 >gi|301057683|ref|ZP_07198758.1| diaminopimelate decarboxylase [delta proteobacterium NaphS2] gi|300448229|gb|EFK11919.1| diaminopimelate decarboxylase [delta proteobacterium NaphS2] Length = 420 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 63/385 (16%), Positives = 116/385 (30%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ L + D + ++K + + G S Sbjct: 25 VGTPAYVYSHATLKQHFDAFDGAFGDVKHLTCYSMKSNSNKALLALFAGRGGGVDIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ K + D + +L K A++ +K Sbjct: 85 ELYRALNAGVDPSRIVFSGVGKSLSDLEYAVSSDILMFNVESPQELLKLNQVAREKGRKA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + R+NP V ++ G ++ I K V G+ H + Sbjct: 145 RISIRVNPDVDPKTHPYISTGLKENKFGIGVEEAIRQYEKATTLKGVEVVGVSCHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223 F LK +++ I ++ LGGG+ T + K + Q +K Sbjct: 205 TRTSPFVDALKKLKELIARLEKMNIAIRYLDLGGGLGITYDNEVPPHPKQYAQDIKRELA 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY 282 + LEPG IV N L VL + + V D+++ + L Sbjct: 265 SSDWTLILEPGRVIVGNAGILVAKVLYAKTSHEKNFFVVDAAMNDLMRPSLYGAYHGIQP 324 Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P A V G C +GD + + + D I+ Y + + +N Sbjct: 325 VKKTPGERLKADVVGPICESGDFLAKDRLIETLTSEDLIAVMSAGAYGFSMSSTYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D ++ D Sbjct: 385 VCEVMVSEDRFEVIRERETFADLVR 409 >gi|302392438|ref|YP_003828258.1| diaminopimelate decarboxylase [Acetohalobium arabaticum DSM 5501] gi|302204515|gb|ADL13193.1| diaminopimelate decarboxylase [Acetohalobium arabaticum DSM 5501] Length = 437 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 70/400 (17%), Positives = 134/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+++L +N + + + A K F + + + + G S Sbjct: 30 GTPLYILDEEELRDNCRAYRQAFEEWYPNSETIYASKAFMSLTICKIVEEEGLGLDVVSG 89 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQK--LH 115 E+ E F + ++ K E ++ N I+ + +L + A + Sbjct: 90 GELYTALEADFPTDKIYFHGNNKTPEELEMVLNEEIGRIVVDNNYELELLNELADQQGKR 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G E K +E E +V G+ H Sbjct: 150 ADILIRVTPGVEAHTHSYIQTGQTDSKFGVGIQNGLALETVKKAVELENIDVKGIHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + + F + + + +E +++GGGI D Sbjct: 210 SQIFNLESFEVAVDVMLDFVEEVKIETGLVMEELNIGGGIGIKYTDKDQSVSIDQYAELV 269 Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K+ E+ ++ I EPG +I+ + TV I V + ++ Sbjct: 270 AKAIKQKCEEINIPLPKIINEPGRSIIGTAGSTIYTVGSIKNIPDVRKYVAVDGGMPDNI 329 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E I N + G+ C +GD+ ++ GD + Sbjct: 330 RPALYEAEYEAIVANKANRKPEEVVSITGKCCESGDMLIWDIELPEMEPGDVLLTPCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y N +N + P + + N + IR Y D Sbjct: 390 YGYAMANNYNSLPKPGVVLINNGQVEEIIRGERYEDLVAK 429 >gi|294651118|ref|ZP_06728454.1| diaminopimelate decarboxylase [Acinetobacter haemolyticus ATCC 19194] gi|292823012|gb|EFF81879.1| diaminopimelate decarboxylase [Acinetobacter haemolyticus ATCC 19194] Length = 416 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 121/389 (31%), Gaps = 26/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L + ++ A+K + + + L + G + E Sbjct: 25 GTPLYVYSKATLEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVTGGE 84 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K + ++L++ + A KL Sbjct: 85 LARVLAAGGDPAKIVFSGLGKSEADIEKALTVGIACFNVESHAELDRIQKVAAKLGKKAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC--- 167 I LR+NP V ++ G + + G+ H Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVDATYQYAASLSNLEIVGIDCHIGSQLT 204 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224 E K F+ + + ++ ++ I +GGG+ KD + ++ EK Sbjct: 205 ETKPFVDALDRVILMIEQLKKLGINLKHIDIGGGLGVCYKDETPPTVAEYANSMRPALEK 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++Y+EPG +I N L T V L N +N I+D+++ + L Sbjct: 265 LGLKVYMEPGRSISANAGALLTKVDLLKPTNHRNFAIIDAAMNDLIRPALYEAWMDIQSV 324 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 N T + G C GD G+ ++ D ++ Y + +N Sbjct: 325 NPNSDVEVKTWDLVGAICETGDFLGKERNLA-LQENDVLAVLGAGAYGFVMSSNYNSRGR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366 + N D + L Sbjct: 384 AAEVMVNGDQVYLIRERETIESLWEKERL 412 >gi|37679422|ref|NP_934031.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016] gi|37198166|dbj|BAC94002.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016] Length = 381 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 168/368 (45%), Positives = 241/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP+++ID+ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 10 LKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+EKFGGETHAY+V Y + ++ V CD IIFN+ SQL + + IGLR Sbjct: 70 EVKLGYEKFGGETHAYSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVEGKA-SIGLR 128 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + + ++NG+MFH NCENK F A+L + Sbjct: 129 LNPGVSYASQDLANPARQFSRLGVQADHIDPAVFDSINGVMFHMNCENKDVDAFIALLDS 188 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+S+GGG+ FT Y V+ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 189 ISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEPGEAIITKT 248 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+D+ EN IVDS+ EAH D L+Y+E A++ G + ++ SCLA Sbjct: 249 TDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYVIGSCSCLA 308 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F F++P+ +G R+ D AGY + + NWFNG+ MP++ + +G I+ + EF Y Sbjct: 309 GDQFCVAKFDQPLHVGQRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEIQKLNEFGY 368 Query: 360 NDYYNNLS 367 D+ LS Sbjct: 369 EDFKRTLS 376 >gi|251793705|ref|YP_003008435.1| diaminopimelate decarboxylase [Aggregatibacter aphrophilus NJ8700] gi|247535102|gb|ACS98348.1| diaminopimelate decarboxylase [Aggregatibacter aphrophilus NJ8700] Length = 416 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 117/384 (30%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L + + A+K + + + + G S E Sbjct: 26 GTPLYIYSKATLERHWYAFDKAFGEHPHLVCYAVKSNPNIAILNVMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ + A+ + ++L + + A++L Sbjct: 86 LERVLVAGGNPAKVVFSGVAKSEPEITRALEVGIRCFNVESEAELLRINEVARRLGKTAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVEQAREVYKLAATLPNIEIVGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + + ++ ++ + LGGG+ T D + K EK + Sbjct: 206 ELQPFLDAVDRLIVLMEQLKQDGIALKHLDLGGGLGVTYTDETPPHPTEYAKALWEKLNA 265 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I +EPG AI N L T V + +N IVD+ + + L + Sbjct: 266 FSELEIIVEPGRAITANAGILVTKVEYLKSNESRNFAIVDAGMNDMIRPALYQAYMNILE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD ++ Y + + +N Sbjct: 326 IDRTLAREEKIYDVVGPICETSDFLGKQRKLA-IAQGDYLAQRSAGAYGASMSSNYNSHP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D R N+ Sbjct: 385 RTAEVMVDGDKAYLIRRREVLNEL 408 >gi|220921674|ref|YP_002496975.1| diaminopimelate decarboxylase [Methylobacterium nodulans ORS 2060] gi|219946280|gb|ACL56672.1| diaminopimelate decarboxylase [Methylobacterium nodulans ORS 2060] Length = 430 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 64/388 (16%), Positives = 117/388 (30%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+Y L + + A+K + + TL + G S Sbjct: 25 IGTPFYCYASATLERHYRVFAEAFAGDDPLVCYAVKANSNQAVLATLARLGAGMDIVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ E ++ K A+ + + +L + AQ L Sbjct: 85 ELRRALAAGVPAERIVFSGVAKTKAEMEAALQAGILCFNVESEPELAALSEVAQGLGRDA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + +R+NP V + ++ G E + + G+ H + Sbjct: 145 PVSIRVNPDVDARTHAKISTGKSENKFGIPISRAREVYARAATLPGLRLAGVDMHIGSQI 204 Query: 170 K---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F +A+L + ++ ++ I GGG+ F L+ Sbjct: 205 TDLAPFDNAAALLAELARDLMAAGHRLHHIDFGGGLGIPYRDDNAPPPDPSAFAAVLRPH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 ++ E G I N L T V+ + + + VIVD+++ + L Sbjct: 265 FRPLGLRPVFEIGRMIAGNAGILVTRVVYVKQGEGRTFVIVDAAMNDLIRPTLYEAYHAI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 A P+ TA V G C +GD V GD I+ Y + +N Sbjct: 325 RPVAQPDPHAPRLTADVVGPVCESGDYLALGREMPAVAPGDLIAVMTAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + +Y + Sbjct: 385 TRRLVPEVLVRGADHAVVRPRQTYEELI 412 >gi|270340059|ref|ZP_06006901.2| carboxynorspermidine decarboxylase [Prevotella bergensis DSM 17361] gi|270332813|gb|EFA43599.1| carboxynorspermidine decarboxylase [Prevotella bergensis DSM 17361] Length = 393 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 118/380 (31%), Positives = 192/380 (50%), Gaps = 19/380 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++ KL NL ++ K A ++++LA K FA W F +Y+ T+SSL E Sbjct: 14 PAYILEEAKLRKNLQLITHVAKEANIEVILAFKAFALWKTFPIFREYIHSVTASSLSEAR 73 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGLRI 122 LG E+FG HAY+ AY D EID + + FN++SQ+ ++ + ++ +GLRI Sbjct: 74 LGREEFGTPVHAYSPAYTDYEIDTIARCSSHLTFNSLSQMTRYMPRVKQINPTISLGLRI 133 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S IL DP P SR G + + + ++G H +CEN F L++I Sbjct: 134 NPEYSEIDNILYDPCAPGSRFGVRAEKLPDRLTDGIDGFHCHCHCENN-ADVFQRTLEHI 192 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E++F + TQI+WI+ GGG T K Y + + L F ++Y + LEPG A + T Sbjct: 193 EQKFSKWFTQIKWINFGGGHLMTKKGYDTELLIRLLNNFHKRYPHLHVILEPGSAFLWET 252 Query: 242 TTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYPNTGPYT----------- 289 L + V+DI E+ + + H+PD L ++ + Sbjct: 253 GPLVSQVVDIVEDKSIRTAILNVSFACHMPDCLEGPYWPSVRGAKTYESPDGSMVKTAGT 312 Query: 290 ---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + G SCL+GD G + F+ + +G + ED+ Y + N FNG++ P+I + Sbjct: 313 KNVYRLGGNSCLSGDFMGYWEFDHELHVGQNVILEDMIHYTTVKTNMFNGVSHPSIFLAR 372 Query: 347 VDGTIKAIREFSYNDYYNNL 366 +G ++ +RE+SY DY + + Sbjct: 373 ENGELELLREYSYEDYKSRM 392 >gi|239500988|ref|ZP_04660298.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB900] Length = 416 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 123/389 (31%), Gaps = 26/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + ++ A+K + + + L + G S E Sbjct: 25 GTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGE 84 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K N + ++L++ + A +L Sbjct: 85 LARVLKAGGDASKIVFSGLGKTEADIETSLNVGIACFNVESYAELDRIQKVAARLGKKAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167 I LR+NP V ++ G + G+ H Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYETYQYAASLPNLEIVGIDCHIGSQLT 204 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 E K F+ + + E ++ I +GGG+ KD V+++ +K EK Sbjct: 205 ETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGLGVCYKDEIPPSVEEYANSMKPALEK 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279 +++Y+EPG +I N L T V L +N I+D+++ + L Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 +T T + G C GD G+ ++ D ++ Y + +N Sbjct: 325 VPRTDTEEKTWDLVGAICETGDFIGKDRSLA-LQENDLLTVLGAGAYGFVMSSNYNTRGR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366 + + + + + L Sbjct: 384 AAEVMVSGEKSYLIRERETVESLWEKERL 412 >gi|260774852|ref|ZP_05883754.1| diaminopimelate decarboxylase [Vibrio coralliilyticus ATCC BAA-450] gi|260609277|gb|EEX35432.1| diaminopimelate decarboxylase [Vibrio coralliilyticus ATCC BAA-450] Length = 417 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 56/378 (14%), Positives = 108/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A+K + G+ +TL + G S E Sbjct: 27 GTPLYVYSRATFERHWNAFDKSVGEHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGEASKVVFSGVGKTAPEMKRALELGIKCFNVESEPELERLNKVAGELGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LRINP V + ++ G + G+ H + Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYQFAQGLKNLTIKGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + IE + +GGG+ P + L Sbjct: 207 DIEPFIDATDRLLALIDDLKAQGINIEHLDVGGGLGVVYRDELPPEPSEYAKALLGRLEN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P T + G C GD G+ ++ D ++ Y + +N Sbjct: 327 VNPREGEPVTYDLVGPICETGDFLGKDRALV-LQENDLLAVRSAGAYGFVMSSNYNTRTR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + + Sbjct: 386 VAEVMVDGNKAHLVRQRE 403 >gi|90581046|ref|ZP_01236846.1| putative diaminopimelate decarboxylase [Vibrio angustum S14] gi|90437742|gb|EAS62933.1| putative diaminopimelate decarboxylase [Vibrio angustum S14] Length = 416 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 59/383 (15%), Positives = 107/383 (27%), Gaps = 24/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWKAFDEAVATHPHLICYAVKANSNLGVLNVLARLGSGFDIVSQGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ + +L + A++L Sbjct: 87 LERVIAAGGDPAKVVFSGVGKTATEMKRALELGIKCFNVESEPELERLNAVAEELGVTAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G +E V G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIVFDRAVEVYRLAHSLPHLQVVGMDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + E I+ + LGGG+ T D + Sbjct: 207 DISPFIDATDRLLALVDELKAEGIHIQHLDLGGGLGVTYNDEQPPQPADYASALLARLEN 266 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 ++ EPG AI N L T V + IVD+++ + L Sbjct: 267 YPDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIVDAAMNDLIRPTLYSAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C GD G+ + GD ++ Y + +N Sbjct: 327 VSPRQGEAHVYDLVGPICETGDFIGKDRSLC-LAQGDLLAVRSAGAYGFVMASNYNTRAR 385 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 + + + + Sbjct: 386 AAEIMVDGEQAHVVRERETLTQL 408 >gi|229543952|ref|ZP_04433011.1| diaminopimelate decarboxylase [Bacillus coagulans 36D1] gi|229325091|gb|EEN90767.1| diaminopimelate decarboxylase [Bacillus coagulans 36D1] Length = 438 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 127/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + GVK + A K F+A M ++ S Sbjct: 30 GTPLYVYDVALIRQRARAFKETFRKLGVKSQVAYASKAFSAIAMIQLADEEGLSLDVVSG 89 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K E + + I+ + +L+ ++ + +K Sbjct: 90 GELYTALAAGFPVEHIHFHGNNKSREELEMALDAGIGYIVADNFYELDMLENLCAEKGRK 149 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LR+ P + + S+ G K + S + G+ H Sbjct: 150 VSALLRVTPGIEAHTHDYILTGQEDSKFGFDLQNGQAEAALKQVLSSGWIKLLGVHCHIG 209 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKEF 221 + F ++ +++ + E ++LGGG + ++E Sbjct: 210 SQIFETAGFVLAVQKIMDKLDEWHARYGYFPEVLNLGGGFGIRYTEEDHPLPPAYYVEEI 269 Query: 222 SEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 ++ +I++EPG ++V T +V E + + ++ Sbjct: 270 VKEVKKQAGSRRLPVPEIWIEPGRSLVGEAGTTLYSVGSRKEVPHVRKYIAVDGGMSDNI 329 Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N T V G+ C +GD+ D ++ Sbjct: 330 RPALYDAKYEAVLANRPLDKCEETVSVAGKCCESGDMLIWDLPLPKTGSDDLLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + ++ +Y D N Sbjct: 390 YGYSMANNYNRIPRPPVVFVENGKDELVVKRETYEDLIRN 429 >gi|154686579|ref|YP_001421740.1| hypothetical protein RBAM_021480 [Bacillus amyloliquefaciens FZB42] gi|154352430|gb|ABS74509.1| LysA [Bacillus amyloliquefaciens FZB42] Length = 439 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 63/399 (15%), Positives = 127/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + ++ A K F++ M Q S Sbjct: 30 GTPLYVYDVALIRERAKSFKQAFIDADLKAQVAYASKAFSSVAMIQLAEQEGLSLDVVSG 89 Query: 61 YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F + ++ ++ A+ I+ + +++ + +K Sbjct: 90 GELFTAVAAGFPADRIHFHGNNKSEEELKMALDHQIGCIVVDNFYEISLLAELCRKSGRT 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G + ++S+ + G+ H Sbjct: 150 MDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQIEKAIEQVLQSDHIRLLGVHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F + I + + E ++LGGG + Sbjct: 210 SQIFDTAGFVLAAEKIFAKLNEWRESFGFVSEVLNLGGGFGIRYTEEDEPLHPAVYVEKI 269 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + +KE + ++ I ++EPG ++V + T T+ E VD + ++ Sbjct: 270 IEAVKENAALHAFDIPEIWIEPGRSLVGDAGTTLYTIGSQKEVPGTRKYAAVDGGMSDNI 329 Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ VK GD ++ Sbjct: 330 RPALYQAKYEAVSANRIGEHHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + IR +Y D Sbjct: 390 YGYSMANNYNRIPRPAVVFVEDGEAHLVIRRETYEDIVK 428 >gi|260549303|ref|ZP_05823523.1| diaminopimelate decarboxylase [Acinetobacter sp. RUH2624] gi|260407709|gb|EEX01182.1| diaminopimelate decarboxylase [Acinetobacter sp. RUH2624] Length = 416 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + ++ A+K + + L + G S E Sbjct: 25 GTPLYVYSKTAFEKHYLDMDRAFDFIDHQICFAVKSNSNLAVLSVLAKLGAGFDIVSGGE 84 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K N + ++L++ + A +L Sbjct: 85 LARVLKAGGDASKIVFSGLGKTEVDIETSLNVGIACFNVESYAELDRIQKVAARLGKKAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167 I LR+NP V ++ G + G+ H Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYETYQYAASLPNLEIVGIDCHIGSQLT 204 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 E K F+ + + E ++ I +GGG+ KD ++ +K EK Sbjct: 205 ETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLL---YQESAT 280 +++Y+EPG +I N L T V L +N I+D+++ + L Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324 Query: 281 IYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C GD G+ ++ D ++ Y + +N Sbjct: 325 VPRTDTEEKVWDLVGAICETGDFIGKDRSLA-LQENDLLAVLGAGAYGFVMSSNYNTRGR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366 + + + + + L Sbjct: 384 AAEVMVSGENSYLIRERETVESLWEKERL 412 >gi|209695577|ref|YP_002263506.1| carboxynorspermidine decarboxylase [Aliivibrio salmonicida LFI1238] gi|208009529|emb|CAQ79821.1| carboxynorspermidine decarboxylase [Aliivibrio salmonicida LFI1238] Length = 381 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 173/368 (47%), Positives = 241/368 (65%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++ID+ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS Y Sbjct: 10 LKTPYFMIDEAKLIANLEVAKRLKEQSGVKLVLALKCFSTWGVFDLIKPYLDGTTSSGPY 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LGHE FGGETHAY+V Y + ++ V+ C+ +IFN+ SQL ++ + +GLR Sbjct: 70 EVRLGHETFGGETHAYSVGYSEDDVKEVIEICNKLIFNSQSQLTAYRHLVEGKV-SVGLR 128 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + + + +NG+MFH NCENKS FS++L Sbjct: 129 LNPGVSYAGQDLANPAREFSRLGVQADRLDTNVFEYINGVMFHMNCENKSVDAFSSLLDA 188 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I FG ++ +EW+SLGGG+ FT DY V LK FS+K+ VQ+YLEPGEAI+T T Sbjct: 189 ISVRFGTYLDTLEWVSLGGGVFFTWPDYDVDKLATVLKAFSDKHKVQLYLEPGEAIITKT 248 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 L +V+DI EN K IVDS+ EAH D L+Y E A+I G Y ++ SCLA Sbjct: 249 ADLVVSVVDIVENGKKTAIVDSATEAHRLDTLIYNEPASILEASEQGQYEYIIGSCSCLA 308 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F E FE+P++IG ++ D AGY + + NWFN + MP++ + G I + EF Y Sbjct: 309 GDQFCETQFEQPLQIGQKLHLLDSAGYTMVKLNWFNRLKMPSVYCERRSGKIDKLNEFDY 368 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 369 SDFKRSLS 376 >gi|317505459|ref|ZP_07963377.1| carboxynorspermidine decarboxylase [Prevotella salivae DSM 15606] gi|315663372|gb|EFV03121.1| carboxynorspermidine decarboxylase [Prevotella salivae DSM 15606] Length = 413 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 113/374 (30%), Positives = 192/374 (51%), Gaps = 13/374 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++ +L NL+ + + A V+++LA K +A W F +Y+ TT+SSL E Sbjct: 40 PIYILEEARLRRNLNLIKDVAREADVEVILAFKAYALWKTFPIFREYIRATTASSLSEAR 99 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRI 122 L E+FG + H ++ AY D EID + + FN+++Q ++ ++ + +GLRI Sbjct: 100 LAFEEFGSKAHTFSPAYTDYEIDEIARLSSHLQFNSLTQYARYHERVRKENATISLGLRI 159 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S L +P P +R G E+ ++ G H +CE+ F L++I Sbjct: 160 NPEYSEVGTDLYNPCAPGTRFGITADKLPETLPADIEGFHCHCHCESG-AETFERTLQHI 218 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E +F + +Q++WI+ GGG T DY L++F ++Y ++ LEPG A T Sbjct: 219 EAKFSRWFSQLKWINFGGGHLMTRNDYDTMLLVDVLQKFRQRYPWLKVILEPGSAFAWQT 278 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG--------PYTAMV 292 L + V+D+ E+ ++ + S H+PD L + PY + Sbjct: 279 GPLVSQVVDVVEDRGIKTVILNVSFTCHMPDCLEMPYFPVVRGAKHIAQDNHHSPYIYRL 338 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G SCL+GD G + F+ ++G+ + FED+ Y + N FNGI+ P I + +DGT++ Sbjct: 339 GGNSCLSGDFMGYWEFDHAPQVGENVIFEDMLHYTTVKTNMFNGISHPAIGIARLDGTLE 398 Query: 353 AIREFSYNDYYNNL 366 +RE+ Y DY+ + Sbjct: 399 ILREYGYEDYHERM 412 >gi|163859235|ref|YP_001633533.1| hypothetical protein Bpet4914 [Bordetella petrii DSM 12804] gi|163262963|emb|CAP45266.1| lysA [Bordetella petrii] Length = 430 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 123/388 (31%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + L T V + +K + + + G S Sbjct: 38 LGTPLYVYSRAALAQAWRTYSDAIGTRPVLVCYGMKANSNLAVLKEFARLGAGFDIVSGG 97 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + V + E+ A + + ++L D AQ + ++ Sbjct: 98 ELKRVLAAGGNPAKVVFSGVGKQAWEMRAALEAGVKCFNVESQAELQCLSDVAQSMGQRA 157 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 LR+NP V ++ G + +++ + G+ H + Sbjct: 158 RVSLRVNPDVDAQTHPYISTGLKENKFGIAIESALDAYRTAAALPGLEIVGVDCHIGSQL 217 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 + L+ ++ ++ I+ + LGGG+ D L + E+ Sbjct: 218 TDISPYFDALEKLLDLIEQLDAAGIAIQHLDLGGGLGIRYTDEIPPSPKALLDQVFERLQ 277 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES- 278 + + LEPG ++V N L TTV + +N IVD+++ + L Sbjct: 278 ARGMAHLHLVLEPGRSLVGNAGVLLTTVQYLKHAQARNFAIVDAAMNDLLRPALYDAYHG 337 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + G C + D ++ GD ++ E Y + + +N Sbjct: 338 VQPVAPRDGAAIEYDIVGPVCESADWLARQRKLA-LQAGDVLALESAGAYAMVMASNYNT 396 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +D Sbjct: 397 RARAAEVMVDGSRHYIVRQRETLDDLLR 424 >gi|315608072|ref|ZP_07883065.1| carboxynorspermidine decarboxylase [Prevotella buccae ATCC 33574] gi|315250541|gb|EFU30537.1| carboxynorspermidine decarboxylase [Prevotella buccae ATCC 33574] Length = 397 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 118/388 (30%), Positives = 195/388 (50%), Gaps = 24/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IK P Y++++ +L NL + + A V+++LA K +A W F +Y+ TT+SSL+ Sbjct: 10 IKHPMYVLEEARLRRNLSLISSVAEAADVEIILAFKAYALWKTFPIFKEYIQATTASSLW 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIG 119 E LG+E+FG +TH ++ AY D EID + + FN+++Q ++ + + ++ G Sbjct: 70 EARLGYEEFGSKTHTFSPAYTDDEIDEIARCSSHLTFNSLTQYERYHQRVRTVNSGISCG 129 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RINP S + +L +P P +R G + E ++ G H CE+ F L Sbjct: 130 IRINPEYSEVETLLYNPCAPGTRFGVRNALLPEKLPTDIEGFHCHTLCESG-ADVFRRTL 188 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 +IE +FG + +QI+WI+ GGG T Y + L+EF +Y ++ LEPG A Sbjct: 189 THIEDKFGAWFSQIKWINFGGGHLMTRAGYDIDLLVATLREFHARYPWLKVVLEPGSAFA 248 Query: 239 TNTTTLNTTVLDI---SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------ 289 T L + V+DI ++ I++ S H+PD L + + Sbjct: 249 WQTGELVSQVVDIVGGTDGEPTTAILNVSFTCHMPDCLEMPYHPRVRGAATLESEDVFLP 308 Query: 290 -----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + G SCL+GD + F+ P++IG+ I FED+ Y + N FNGI+ Sbjct: 309 QTTEDGGRSYVYRLGGNSCLSGDFMRSWAFDHPLQIGENIIFEDMLHYTTVKTNTFNGIS 368 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNNL 366 P I + DG+++ +R +SY DY + Sbjct: 369 HPAIGLVRCDGSLEMLRTYSYADYKARM 396 >gi|288925034|ref|ZP_06418970.1| carboxynorspermidine decarboxylase [Prevotella buccae D17] gi|288338224|gb|EFC76574.1| carboxynorspermidine decarboxylase [Prevotella buccae D17] Length = 397 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 118/388 (30%), Positives = 195/388 (50%), Gaps = 24/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IK P Y++++ +L NL + + A V+++LA K +A W F +Y+ TT+SSL+ Sbjct: 10 IKHPMYVLEEARLRRNLSLISSVAEAADVEIILAFKAYALWKTFPIFKEYIQATTASSLW 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIG 119 E LG+E+FG +TH ++ AY D EID + + FN+++Q ++ + + ++ G Sbjct: 70 EARLGYEEFGSKTHTFSPAYTDDEIDEIARCSSHLTFNSLTQYERYHQRVRTVNSGISCG 129 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RINP S + +L +P P +R G + E ++ G H CE+ F L Sbjct: 130 IRINPEYSEVETLLYNPCAPGTRFGVRNALLPEKLPTDIEGFHCHTLCESG-ADVFRRTL 188 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 +IE +FG + +QI+WI+ GGG T Y + L+EF +Y ++ LEPG A Sbjct: 189 THIEDKFGAWFSQIKWINFGGGHLMTRAGYDIDLLVATLREFHARYPWLKVVLEPGSAFA 248 Query: 239 TNTTTLNTTVLDI---SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------ 289 T L + V+DI ++ I++ S H+PD L + + Sbjct: 249 WQTGELVSQVVDIVGGTDGEPTTAILNVSFTCHMPDCLEMPYHPRVRGAATLESEDGFLP 308 Query: 290 -----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + G SCL+GD + F+ P++IG+ I FED+ Y + N FNGI+ Sbjct: 309 QTAEDGGRSYVYRLGGNSCLSGDFMRSWAFDHPLQIGENIIFEDMLHYTTVKTNTFNGIS 368 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNNL 366 P I + DG+++ +R +SY DY + Sbjct: 369 HPAIGLVRCDGSLEMLRTYSYADYKARM 396 >gi|13473029|ref|NP_104596.1| diaminopimelate decarboxylase [Mesorhizobium loti MAFF303099] gi|14023777|dbj|BAB50382.1| diaminopimelate decarboxylase [Mesorhizobium loti MAFF303099] Length = 422 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 64/388 (16%), Positives = 120/388 (30%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLTRHYRVFAQAFAGLDALVCYAMKANSNQAVLRTLARLGAGADVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K A+ + + +L + A Sbjct: 85 ELRRALAAGIPASKILFSGVGKTAREIDLALEAGILCFNVESEPELELLSARAVALGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I LRINP V + ++ G + + + V G+ H + Sbjct: 145 PISLRINPDVDAKTHKKISTGKAENKFGIAWQRARQVYARAATLPGIKVTGIDTHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + IE + LGGG+ + + Q +++ Sbjct: 205 TELQPFDDAFALLVDLVGALRADGHAIEHVDLGGGLGIPYRVDNNPPPLPDAYAQIVRKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 K +++ EPG IV N L + V+ + E + KN ++VD+++ + L Sbjct: 265 VTKLGLKVMFEPGRLIVGNAGILVSEVIFVKEGDAKNFLVVDAAMNDLIRPTLYDAFHDI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P V G+ C GD G +K GD ++ Y + +N Sbjct: 325 RPVVQPPADTPRMMVDVVGQVCETGDYLGLDRDLPRLKAGDLVAVSTAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + + D +Y+D Sbjct: 385 TRLLVPEVLVDGDRFHIVRPRLTYDDLI 412 >gi|50085728|ref|YP_047238.1| diaminopimelate decarboxylase [Acinetobacter sp. ADP1] gi|49531704|emb|CAG69416.1| diaminopimelate decarboxylase [Acinetobacter sp. ADP1] Length = 416 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 61/386 (15%), Positives = 124/386 (32%), Gaps = 24/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + ++ A+K + + + L + G + E Sbjct: 25 GTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLAVLNVLAKLGSGFDIVTGGE 84 Query: 63 VMLGH-EKFGGETHAYNV-AYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ + + A+ + ++L++ + A +L + Sbjct: 85 LARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVESYAELDRIQKVAVRLDQKAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167 + LR+NP V ++ G +V G+ H Sbjct: 145 VSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFETYQYAASLSHLDVVGIDCHIGSQLT 204 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 E K F+ + + ++ ++ I +GGG+ KD ++ LK EK Sbjct: 205 ETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGVCYKDETPPSVAEYANALKPALEK 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++Y+EPG +I N L T V L N +N I+D+++ + L Sbjct: 265 LGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFAIIDAAMNDLIRPSLYEAWMDIQSV 324 Query: 284 NT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 N V G C GD G+ ++ D ++ Y + +N Sbjct: 325 NESTSAEAKEWDVVGAICETGDFLGKARTLA-IQENDILAVLGAGAYGFVMSSNYNTRGR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + S + Sbjct: 384 AAEVMVDDEKPHLIRERESIESLWER 409 >gi|323705134|ref|ZP_08116710.1| diaminopimelate decarboxylase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535560|gb|EGB25335.1| diaminopimelate decarboxylase [Thermoanaerobacterium xylanolyticum LX-11] Length = 445 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 75/400 (18%), Positives = 134/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ L N + K G +++ A K F + + + G S Sbjct: 29 GTPLYVIDEELLRENCRSFYNGFKKNYPGNEVIYASKAFMTTAICKIIEEENLGLDVVSG 88 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + ++ K D A+ N II + +LN + A Sbjct: 89 GELYTALKADFPVQNIYFHGNNKSIDELTMALEYNIGCIIVDNWFELNMLNELALKMGKK 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I LRI+P V + S+ G + K + + N+ GL H Sbjct: 149 PNIYLRISPGVEAHTHEYIKTGQIDSKFGFPLFNGDALDAIKYALTLDNVNLTGLHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + S+ + A + + ++E + LGGG + + + Sbjct: 209 SQIFSYDSYKAEIDIMMNFLKKVKDTTGWEVENLDLGGGFGIAYVEEDDPQPIELIASEI 268 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 K I +EPG +I+ N T TV I V + ++ Sbjct: 269 MKTVEEFSKELNIKRPNIIVEPGRSIIGNAGTTLYTVGAIKNIPGVRKYVSVDGGMADNI 328 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N + G+ C +GD+ ++ GD I+ Sbjct: 329 RTALYGAKYNAIVANKARKINLEKVSIAGKCCESGDMLIWDIDLPQLESGDIIAVTCTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N + P + N + + +Y+D N Sbjct: 389 YNYSMASNYNRLPRPAAVLLNNGESDLIVARETYDDLIKN 428 >gi|16272667|ref|NP_438885.1| diaminopimelate decarboxylase [Haemophilus influenzae Rd KW20] gi|260579819|ref|ZP_05847649.1| diaminopimelate decarboxylase [Haemophilus influenzae RdAW] gi|1169235|sp|P44316|DCDA_HAEIN RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|1573731|gb|AAC22385.1| diaminopimelate decarboxylase (lysA) [Haemophilus influenzae Rd KW20] gi|260093103|gb|EEW77036.1| diaminopimelate decarboxylase [Haemophilus influenzae RdAW] Length = 415 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 116/384 (30%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + N + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGNRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVRIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L + Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D + R + + Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408 >gi|16126452|ref|NP_421016.1| diaminopimelate decarboxylase [Caulobacter crescentus CB15] gi|221235233|ref|YP_002517669.1| diaminopimelate decarboxylase [Caulobacter crescentus NA1000] gi|13423716|gb|AAK24184.1| diaminopimelate decarboxylase [Caulobacter crescentus CB15] gi|220964405|gb|ACL95761.1| diaminopimelate decarboxylase [Caulobacter crescentus NA1000] Length = 421 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 66/390 (16%), Positives = 123/390 (31%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSS 58 + TP Y+ + L + +GV + A+K + + L G + Sbjct: 25 VGTPVYVYSRATLERHFVVFRDALAMSGVVDPLIAYAVKANSNVAVLKVLGDLGAGADTV 84 Query: 59 SLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL- 114 S EV GE ++ K A + I + +LN + A +L Sbjct: 85 SEGEVRRALAAGIPGERIVFSGVGKARREIAFALQAGVAEINVESEPELNLIAEVAAELG 144 Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNN 166 K+ R+NP V+ + ++ G + G+ H Sbjct: 145 VRAKVAFRVNPDVAAGGHAKIATGKSENKFGVSFAEAARLYANASNNANLQPVGVACHIG 204 Query: 167 CENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD----FCQRLK 219 + A + +E + LGGG+ ++P F + Sbjct: 205 SQITDLAPMRAAFTKMRGLVEQLLAEGLSVERLDLGGGLGVPYFNHPEPPSPAEFAAMVG 264 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYLLYQE 277 E ++ V + EPG I N L + V+ + E + +D+++ V + Sbjct: 265 EVTQGLPVTLAFEPGRVIAANAGVLVSEVIHVHERPEGRKFLVIDAAMNDLVRPAMYDAF 324 Query: 278 SA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + TG V G C GD F P GD ++F Y + +N Sbjct: 325 HDIRPVIQRTGETVYDVVGPVCETGDTFTRDRALPPFAAGDLVAFMSAGAYGAAMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D + +Y++ Sbjct: 385 TRPLVPEVLVDGDRYAVIRQRPTYDEMLAR 414 >gi|124485458|ref|YP_001030074.1| diaminopimelate decarboxylase [Methanocorpusculum labreanum Z] gi|124362999|gb|ABN06807.1| diaminopimelate decarboxylase [Methanocorpusculum labreanum Z] Length = 433 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 77/393 (19%), Positives = 133/393 (33%), Gaps = 33/393 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ ++ + N K V+LL A K + +L + G SL Sbjct: 29 GTPLYVTNENHVTGNFRRYEAALKKYTNNVQLLYAAKANENPVIIQSLAREGAGADIFSL 88 Query: 61 YEVMLGHEKFGGETH--AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E+ E + + ++ A + I ++V +L + ++L K Sbjct: 89 GEMRAALEAGIPAGILLFNGSSKTEADLRAAIEKDIMISVDSVDELRQIDAITKELKKTA 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169 KIG R+NP++ S+ G + +E+ + + G+ H + Sbjct: 149 KIGFRVNPAIEVPTHPKIATGIKNSKFGIPAEMILEAYREALSMEYVVPVGMHCHIGSQI 208 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY--------PVKDFCQRL 218 F+ I K G ++E+I GGG+ P + + Sbjct: 209 LEVEPFAIACGVIMKVAGEVTKIGVKLEFIDFGGGLGIPYHREGTVDKAPTPEEYAAAVM 268 Query: 219 KEFSEKYS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273 F E ++EPG +V +T L T V + + K V VD+ + + Sbjct: 269 PVFLEGCKKAGISPAFWVEPGRWMVGESTILLTRVNSVKKVHKTFVNVDAGFNLLIRPAM 328 Query: 274 LYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + N T + G C GDIFG V GD I+ D Y + Sbjct: 329 YDSWHEVVVANKADQPADGTYTITGPICETGDIFGSDRALPSVVAGDLIAVLDAGAYGYS 388 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + +N + N D R +Y + Sbjct: 389 MSSQYNSRPRCPEVLVNGDKAELMRRAETYEEM 421 >gi|331005625|ref|ZP_08328994.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC1989] gi|330420550|gb|EGG94847.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC1989] Length = 417 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 56/386 (14%), Positives = 117/386 (30%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A+K + + + L + G S+ E Sbjct: 26 GTPAYVYSRAAFTQHYCEYRDALGDHPGMICYAVKANSNIAVLNVLAKLGSGFDIVSIGE 85 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + + ++ K A+ ++ +L++ + A+ + Sbjct: 86 LERVIQAGGDPQRIVFSGVAKTEGEMRRALELGVYCFNIESIPELSRLQTVAESMGVQAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G +E + G+ H + Sbjct: 146 ISLRVNPDVDAETHPYISTGLKENKFGVDIDHAVEIYQHAATLPNLTIKGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 S F L + + IE + LGGG+ D D+ +K Sbjct: 206 SVAPFLDALDRVLALIDQLAEQGIIIEHLDLGGGLGVVYNDEQPPKIGDYIDEVKRRIAG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283 ++ + EPG +I N L T V + I+D+ + ++ L + Sbjct: 266 RNLSLSFEPGRSIAANAGVLLTKVEFLKPTEHKNFAIIDAGMNDNIRPSLYRAWQKVLPV 325 Query: 284 NTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + G C GD + + GD ++ Y + +N Sbjct: 326 TETKADTATELWDLVGPVCETGDFLAKDRELA-LDEGDYLALMSSGAYGFTMSSNYNSRG 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + + + D Sbjct: 385 RAIEIMVDGDKSHIIRQRETVADLVK 410 >gi|229844596|ref|ZP_04464735.1| diaminopimelate decarboxylase [Haemophilus influenzae 6P18H1] gi|229812310|gb|EEP48000.1| diaminopimelate decarboxylase [Haemophilus influenzae 6P18H1] Length = 415 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 116/384 (30%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L I Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ A Y + + +N Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAAAYGASMSSNYNSRA 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D + R + + Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408 >gi|262369521|ref|ZP_06062849.1| diaminopimelate decarboxylase [Acinetobacter johnsonii SH046] gi|262315589|gb|EEY96628.1| diaminopimelate decarboxylase [Acinetobacter johnsonii SH046] Length = 416 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 127/389 (32%), Gaps = 26/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + ++ A+K + + + L + G + E Sbjct: 25 GTPLYVYSKATFEKHFTEMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVTGGE 84 Query: 63 VMLGH-EKFGGETHAYNV-AYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ + + A+ + ++L++ + A KL Sbjct: 85 LARVLKAGGDASKIVFSGLGKTEIDVQKALEVGIACFNVESHAELDRIQKVAAKLGKKAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC--- 167 I LR+NP V ++ G E+ ++ G+ H Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFETYQYAATLPNLDIIGIDCHIGSQLT 204 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 E + F+ + + + Q++ I +GGG+ T KD V ++ +K EK Sbjct: 205 ETQPFVDALDRVIVMIDQLKTMGIQLKHIDIGGGLGVTYKDEVPPTVFEYANAMKPALEK 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279 +++Y+EPG +I N L T V L +N I+D+++ + L Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTIHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + V G C GD G+ +K D ++ Y + +N Sbjct: 325 TPRSDVEAKEWDVVGAICETGDFLGKERLLA-LKENDVLAVLGAGAYGFVMSSNYNSRGR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366 + + + + L Sbjct: 384 AAEVMVDGENAHLIRERETIESLWDKERL 412 >gi|220931558|ref|YP_002508466.1| diaminopimelate decarboxylase [Halothermothrix orenii H 168] gi|219992868|gb|ACL69471.1| diaminopimelate decarboxylase [Halothermothrix orenii H 168] Length = 448 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 127/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + + + A K F + + + G S Sbjct: 30 GTPLLVFDEWEIRKKAREYVKAFNKYYPNSRTVYASKAFLNQALCYIIEEEGLGLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + F E ++ K AV + + + + + A +L K Sbjct: 90 GELYIALKAGFPPEKIFFHGNNKSNAEIKMAVEAGIGRFMLDNLKEARYINKVAGRLEKS 149 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 I LR+ P + + S+ G ++ I + + G+ H Sbjct: 150 IKAILRVTPGIEAHTHEFIQTGQIDSKFGVSVYRDQALKAIEEIIRMDNIELTGVHVHIG 209 Query: 167 CENKSF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRL 218 + + M + + ++ + LGGG+ D + ++ + + Sbjct: 210 SQIFNLTSFSRTIDVMFEFMNNVRDKTGYILKELDLGGGLGIPYTEDEPDPGIDEYARLV 269 Query: 219 KEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 E + S + EPG +I+ T TV + E VD + ++ Sbjct: 270 SEKVREKSHEFDYPLPVIINEPGRSIIGTAGTTLYTVGTVKEIPFIRKYLAVDGGMTDNI 329 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E A + + G+ C +GDI + GD I+ Sbjct: 330 RPALYGAEYDAILANRADDEREEIVSIAGKCCESGDILIHDIKMPEAREGDIIAIPCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +NG+ P + + N I+ SY D N Sbjct: 390 YTYAMSSNYNGLRRPAVVLVNDGNADLIIKRESYEDLIKN 429 >gi|89074449|ref|ZP_01160926.1| putative diaminopimelate decarboxylase [Photobacterium sp. SKA34] gi|89049737|gb|EAR55287.1| putative diaminopimelate decarboxylase [Photobacterium sp. SKA34] Length = 416 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 62/383 (16%), Positives = 112/383 (29%), Gaps = 24/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWKAFDEAVATHPHLICYAVKANSNLGVLNVLARLGSGFDIVSQGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ + +L + A++L Sbjct: 87 LERVIAAGGDPAKVVFSGVGKTAAEMKRALELGIKCFNVESEPELERLNAVAEELGVTAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE-- 168 I LRINP V ++ G +E V G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIVFDRAVEVYRLAHSLPHLQVVGMDCHIGSQLT 206 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 F+ + L + E I+ + LGGG+ T D P L Sbjct: 207 DITPFIDATDRLLALVDELKAEGIHIQHLDLGGGLGVTYNDEQPPQPSDYASALLARLEN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + IVD+++ + L Sbjct: 267 YPDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIVDAAMNDLIRPTLYSAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C GD G+ + GD ++ Y + +N Sbjct: 327 VSPRQGEAHVYDLVGPICETGDFIGKDRSLC-LAQGDLLAVRSAGAYGFVMASNYNTRAR 385 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 + + + + Sbjct: 386 AAEIMVDGEQAHVVRERETLTQL 408 >gi|187251103|ref|YP_001875585.1| diaminopimelate decarboxylase [Elusimicrobium minutum Pei191] gi|186971263|gb|ACC98248.1| Diaminopimelate decarboxylase [Elusimicrobium minutum Pei191] Length = 417 Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 133/385 (34%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + L N K + ++K + G+ T+ G S Sbjct: 23 VGTPCYIYSNEILTKNFKDFDNALKKFKNTISYSIKANSNLGIVKTIASLGGGADVVSAG 82 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HK 116 E+ + ++ K + I + +++N A KL Sbjct: 83 EMCIALKAGIPANKIVFSGVGKTKRELEEAIKNEILQINAESEAEVNTINHIALKLGKKA 142 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 I LR+NP V + + ++ G + E NV G+ H + Sbjct: 143 NIALRVNPDVDAKTHVKITTGKKENKFGVDWDIAKDLYIKASKMEGLNVVGIAMHIGSQL 202 Query: 170 KSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223 F + ++ E ++ + LGGG+ + + Q ++E Sbjct: 203 LDLDPFRLAFTKMADMVSELEKEGIILKNLDLGGGLGINYNVELPPTKEAYAQVIEETLG 262 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 K++ I +EPG +I+ L + V+ K+ +IVD+ + + + + Sbjct: 263 KFNKHIIIEPGRSIIGEAAILISEVIFTKDMGSKHFIIVDAGMNDLMRPAMYDSWHTIVP 322 Query: 283 PNTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P TA + G C + D F + +PVK G+ ++ Y + + +N + Sbjct: 323 VVKKGLAPITADIVGPICESSDTFAKDRIIEPVKQGELVAMMSAGAYGSSMSSVYNFRPL 382 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + N + + +Y + + Sbjct: 383 VPEVMVNKNAFTVVRKRTTYEEMLS 407 >gi|262376587|ref|ZP_06069815.1| diaminopimelate decarboxylase [Acinetobacter lwoffii SH145] gi|262308297|gb|EEY89432.1| diaminopimelate decarboxylase [Acinetobacter lwoffii SH145] Length = 414 Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 127/386 (32%), Gaps = 24/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L + ++ A+K + + + L + G + E Sbjct: 25 GTPLYVYSKATLEKHFLDMDRAFNFIDHQICFAVKSNSNLAVLNVLAKQGAGFDIVTGGE 84 Query: 63 VMLGH-EKFGGETHAYNV-AYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + ++ + + A+ + ++L++ + A +L+ Sbjct: 85 LARVLKAGGEPSKIVFSGLGKSEADIKKALEVGIACFNVESYAELDRIQKVAAELNVKAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC--- 167 I LR+NP V ++ G E+ +V G+ H Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDSVFETYQYAASLPNLDVVGIDCHIGSQLT 204 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 E + F+ + + + ++ I +GGG+ T KD ++ L+ EK Sbjct: 205 ETQPFVDALDRVIVMIDQLKEMGIHLKHIDIGGGLGVTYKDETPPSVEEYANALRPALEK 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279 +++Y+EPG +I N L T V L N +N I+D+++ + L Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTNHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C GD G+ +K D ++ Y + +N Sbjct: 325 RPRTDAETKEWDIVGAICETGDFLGKERELA-IKENDVLAVLGAGAYGFVMSSNYNSRGR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 + + D + + Sbjct: 384 AAEVMVDADQAHLIRERETIESLWER 409 >gi|260556500|ref|ZP_05828718.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 19606] gi|260409759|gb|EEX03059.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 19606] Length = 416 Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 121/389 (31%), Gaps = 26/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + ++ A+K + + + L + G S E Sbjct: 25 GTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGE 84 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K N + ++L++ + A +L Sbjct: 85 LARVLKAGGDASKIVFSGLGKTEADIETSLNVGIACFNVESYAELDRIQKVAARLGKKAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167 I LR+NP V ++ G + G+ H Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYETYQYAASLPNLEIVGIDCHIGSQLT 204 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 E K F+ + + E ++ I +GGG+ KD ++ +K EK Sbjct: 205 ETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279 +++Y+EPG +I N L T V L +N I+D+++ + L Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 +T T + G C GD G+ ++ D ++ Y + +N Sbjct: 325 VPRTDTVEKTWDLVGAICETGDFIGKDRSLA-LQENDLLTVLGAGAYGFVMSSNYNTRGR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366 + + + + + L Sbjct: 384 AAEVMVSGEKSYLIRERETVESLWEKERL 412 >gi|262278116|ref|ZP_06055901.1| diaminopimelate decarboxylase [Acinetobacter calcoaceticus RUH2202] gi|262258467|gb|EEY77200.1| diaminopimelate decarboxylase [Acinetobacter calcoaceticus RUH2202] Length = 416 Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 121/389 (31%), Gaps = 26/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + ++ A+K + + + L + G S E Sbjct: 25 GTPLYVYSKTAFEKHYLDMDRAFDFIDHQICFAVKSNSNLAVLNVLAKLGAGFDIVSGGE 84 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K N + ++L++ + A +L Sbjct: 85 LARVLKAGGDASKVVFSGLGKTEADIETSLNVGIACFNVESYAELDRLQKVAARLGKKAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167 I LR+NP V ++ G + G+ H Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYETYQYAASLPNLEIIGIDCHIGSQLT 204 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 E K F+ + + E ++ I +GGG+ KD ++ +K EK Sbjct: 205 ETKPFVDALDRVMVMIDELKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279 +++Y+EPG +I N L T V L + +N I+D+++ + L Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTSHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 +T T + G C GD G+ +K D ++ Y + +N Sbjct: 325 VPSTDTEEKTWDLVGAICETGDFIGKDRSLA-LKENDLLAVLGAGAYGFVMSSNYNTRGR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366 + + D + L Sbjct: 384 AAEVMVSGDKAHLIRERETVESLWEKERL 412 >gi|33594789|ref|NP_882432.1| diaminopimelate decarboxylase [Bordetella parapertussis 12822] gi|33599061|ref|NP_886621.1| diaminopimelate decarboxylase [Bordetella bronchiseptica RB50] gi|33564865|emb|CAE39809.1| diaminopimelate decarboxylase [Bordetella parapertussis] gi|33575107|emb|CAE30570.1| diaminopimelate decarboxylase [Bordetella bronchiseptica RB50] Length = 429 Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 60/388 (15%), Positives = 122/388 (31%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + L + +T V + +K + + + G S Sbjct: 37 LGTPLYVYSRAALRSAWETYRDAIGERPVLVCFGMKANSNLAVLKEFARLGAGFDIVSGG 96 Query: 62 EVMLGHE-KFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ + E+ A L + ++L + D A + ++ Sbjct: 97 ELARVLAVGGDPAKVVFSGVGKQAWEMRAALEADVKCFNVESEAELERLSDVAVSMGRRA 156 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCEN 169 LR+NP V ++ G + + V G+ H + Sbjct: 157 RVSLRVNPDVDAQTHPYISTGLKENKFGIAIESAPAAYRLAARLPGVEVVGVDCHIGSQL 216 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 + L+ ++ ++ I+ + LGGG+ D L E+ Sbjct: 217 TDISPYFDALEKLLDLIEQLAENGIAIKHLDLGGGLGIRYTDEIPPSPKALLDRVFERIN 276 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES- 278 + I LEPG ++V N L TTV + +N IVD+++ + L Sbjct: 277 ARGLGHLHIVLEPGRSLVGNAGVLLTTVQYLKHAEARNFAIVDAAMNDLLRPALYEAYHG 336 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 V G C + D ++ GD ++ E Y++ + +N Sbjct: 337 VQPVTPRADKRIEYDVVGPVCESADWLARGRALA-IQAGDVLAVESAGAYSMVMASNYNT 395 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + + Y Sbjct: 396 RVRAAEVMVDGNRHYIVRQRETLESLYQ 423 >gi|91791757|ref|YP_561408.1| diaminopimelate decarboxylase [Shewanella denitrificans OS217] gi|91713759|gb|ABE53685.1| diaminopimelate decarboxylase [Shewanella denitrificans OS217] Length = 414 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 56/377 (14%), Positives = 112/377 (29%), Gaps = 23/377 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + L + G S E Sbjct: 26 GTPVYIYSRATLERHWRAFDDAVGTHPHLICYAVKANSNLAVLNVLARLGSGFDIVSGGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K + A+ + ++L + AQ L+ Sbjct: 86 LARVIEAGGDPKKVVFSGVGKTVEEMQQALELGIYCFNVESSAELEQLNLVAQSLNTKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LRINP V ++ G ++ + +V G+ H + Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEQVFVRAAALSHIDVKGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 F + + ++ + +GGG+ + + + L E + Sbjct: 206 ELKPFLDAMDRLLGLVDRLTALGIELSHLDVGGGLGVPYDNETPPAPQVYAAALVERLGE 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 + + EPG AI N T VL + + K IVD ++ + L Sbjct: 266 RKLTLIFEPGRAIAANAGIFVTQVLYLKENSNKRFAIVDGAMNDLLRPALYSAWQKIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + G C GD G+ V GD ++ Y + +N Sbjct: 326 QQSDAATQAFDIVGPVCETGDFLGKDRQLA-VVAGDLLAIRSCGAYGFAMSSNYNSRPRV 384 Query: 341 TIAVKNVDGTIKAIREF 357 + + Sbjct: 385 AEIMVDGSQAFVVRERE 401 >gi|303256483|ref|ZP_07342497.1| diaminopimelate decarboxylase [Burkholderiales bacterium 1_1_47] gi|302859974|gb|EFL83051.1| diaminopimelate decarboxylase [Burkholderiales bacterium 1_1_47] Length = 437 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 118/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ KQ ++N + + + A+K + + L + G S E Sbjct: 33 GTPLYVYSKQAIVNAFQSYQKPLEPYKHLMCFAVKANSNLSIIRLLGKLGAGFDIVSEGE 92 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + D + ++L++ AQK KK Sbjct: 93 LRRIQAAGCDTSKVIFSGVAKTYHEIEAALDADIKCFNIESPAELDRVIAVAQKKGKKAR 152 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 R+NP V ++ G + S V G+ H + Sbjct: 153 VSFRVNPDVDAKTHPYISTGLKKNKFGIAYDQAVELYLKASRSPELEVVGIDCHIGSQIT 212 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 F + + ++ I GGG+ + P + + Sbjct: 213 DTAPFVDACEKLCTLLDKLRLNGIDLQHIDFGGGLGIQYSNEAVPSPTVLVAALRRALVK 272 Query: 224 KYS--VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS-VEAHVPDYLLYQES-- 278 + ++ E G ++V N+ L TV + + + + + L Sbjct: 273 RGYGDKEMIFEAGRSLVGNSGALLMTVQYMKQGELKNFCIVDCGMNDMIRPTLYQAWMQI 332 Query: 279 -ATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 G T V G C GD G+ V+ GD ++ Y ++ + +N Sbjct: 333 VPVTPKKEGKETYCYVVGPVCETGDWLGKDRLL-NVQEGDLMALLSAGAYGMSMASNYNS 391 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 +P + + + + + + ++ Sbjct: 392 RCLPAEVLVDGNKAVLIRKRQRAEELFS 419 >gi|237809856|ref|YP_002894296.1| diaminopimelate decarboxylase [Tolumonas auensis DSM 9187] gi|237502117|gb|ACQ94710.1| diaminopimelate decarboxylase [Tolumonas auensis DSM 9187] Length = 416 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 113/378 (29%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + + A+K + + L + G S E Sbjct: 27 GTPLYIYSRATIERHWKAFDAAAGDVPHLICYAVKANGNLAILNLLARLGSGFDIVSGGE 86 Query: 63 -VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + + ++ K E D + +L + A + K Sbjct: 87 LARVIAAGGDAKKVVFSGVGKTEEEMRYALGQDILCFNVESEPELERLNQVAGSMGKVAR 146 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 +RINP + ++ G + E + G+ H + Sbjct: 147 ISIRINPDIDAGTHPYISTGLKQNKFGIPIERAPEVYRYAASLPNLQITGVDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224 F + + E +I + +GGG+ D + LK+ + Sbjct: 207 EISPFLEAVDKLLALIDELSAAGIKIHHLDVGGGLGVNYNDETPPHPSEYALALKQKLQD 266 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + EPG AI+ N L T V + ++ IVD+++ + L I Sbjct: 267 RDLTLMFEPGRAIMANAGILATKVEYLKAGEDRHFAIVDAAMNDLIRPSLYSAWMNIIPV 326 Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 N + V G C GD G+ + GD + Y + + +N + Sbjct: 327 NRSLPRDAHHYDVVGPICETGDFLGKDRELA-IAPGDYLVVRSAGAYGFSMASNYNARSR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + Sbjct: 386 AAEVLVDGEQPHLVRERE 403 >gi|222109911|ref|YP_002552175.1| diaminopimelate decarboxylase [Acidovorax ebreus TPSY] gi|221729355|gb|ACM32175.1| diaminopimelate decarboxylase [Acidovorax ebreus TPSY] Length = 431 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 56/389 (14%), Positives = 114/389 (29%), Gaps = 28/389 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + +L+ L V++ A+K ++ + ++ G S E Sbjct: 34 GTPLYVYSQAAMLDALGAYQRGFAGRKVQICYAMKANSSLAVLQLFARHGCGFDIVSAGE 93 Query: 63 VML--GHEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + V + A+ + ++L + AQ + Sbjct: 94 LQRVIAAGGDPAKVIFSGVGKTRAEMRQALEVGIGCFNVESEAELEVLSEVAQSMGLRAP 153 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 I +R+NP+V ++ G + V G+ H + Sbjct: 154 ISIRVNPNVDAKTHPYISTGLKGNKFGIAHERTVATYQRAAALPGLRVVGIDCHIGSQIT 213 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + + + I GGG+ + K Sbjct: 214 EESPYLDAMDRMLDLVQAIEAAGIAVHHIDFGGGLGIDYNGDTPPRADALWAKLLAKLDA 273 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 Q+ +EPG ++V N T VL + + + D+++ + A Sbjct: 274 RGYGDRQLMIEPGRSLVGNAGVCLTEVLYLKPGEQKNFCIVDAAMNDLPRPAMYQAYHAI 333 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + V G C +GD G V GD ++ Y + + +N Sbjct: 334 VPLQATAPTAVSHVYDVVGPICESGDWIGRDRNLA-VAAGDMLAVLSAGAYCSSMGSTYN 392 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 P + + S ND + Sbjct: 393 TRPRPAEVLVDGARAHLIRTRESVNDIFR 421 >gi|323500161|ref|ZP_08105106.1| diaminopimelate decarboxylase [Vibrio sinaloensis DSM 21326] gi|323314790|gb|EGA67856.1| diaminopimelate decarboxylase [Vibrio sinaloensis DSM 21326] Length = 417 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 55/378 (14%), Positives = 109/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWNAFDKSVGEHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGDAKKVVFSGVGKTEQEMQRALELGIKCFNVESEPELERLNKVAGQLGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V + ++ G ++ G+ H + Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYQFASSLENLDIKGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + QIE + +GGG+ P L + Sbjct: 207 DIEPFIDATDRLLALIDDLKAQGIQIEHLDVGGGLGVVYRDELPPQPSDYAKALLGRLAN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G C GD G+ ++ D ++ Y + +N Sbjct: 327 VSPRQGDAKVYDLVGPICETGDFLGKDRELV-IEENDLLAVRSAGAYGFVMSSNYNTRTR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + + Sbjct: 386 VAEVMVDGEKAHLVRQRE 403 >gi|86359380|ref|YP_471272.1| diaminopimelate decarboxylase protein [Rhizobium etli CFN 42] gi|86283482|gb|ABC92545.1| diaminopimelate decarboxylase protein [Rhizobium etli CFN 42] Length = 422 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 110/389 (28%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + A+K + + TL + G S Sbjct: 25 VGTPFYVYSTATLERHYRVFSEAFADVDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ K + A+ + + +L +A Sbjct: 85 ELRRALAAGIPANRIMFSGVGKTPQEMDFALEAGIYCFNVESEPELEILNQRAVNAGKTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + RINP V + ++ G V G+ H + Sbjct: 145 PVSFRINPDVDAKTHAKISTGKKENKFGISWDRARAIYAHAAKLPGIEVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F K + I + +GGG+ KD + +K Sbjct: 205 TELQPFDDAFKLLSDLVATLRADGHSIHHVDIGGGLGVPYKDDNNPPPLPDAYAAIVKNQ 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + +I EPG IV N L T VL + + K VIVD ++ + L Sbjct: 265 LRGLNCKIITEPGRLIVGNAGILVTEVLYVKDGGEKTFVIVDGAMNDLIRPTLYEAYHEI 324 Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A V G C GD K GD ++ Y + +N Sbjct: 325 RPVTISAANAPRIRADVVGPVCETGDYLALDREMAMPKPGDLMAVSTAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +Y + + Sbjct: 385 SRLLVPEVLVKGSDFHVIRPRRTYAELIS 413 >gi|254226601|ref|ZP_04920182.1| diaminopimelate decarboxylase [Vibrio cholerae V51] gi|125620873|gb|EAZ49226.1| diaminopimelate decarboxylase [Vibrio cholerae V51] Length = 417 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 109/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ +TL + G S+ E Sbjct: 27 GTPLYVYSRATLERHWHAFDKSVGEYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ + +L + A +L Sbjct: 87 LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G + +V+G+ H + Sbjct: 147 ISLRINPDVDAQTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNLDVHGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F + I + +GGG+ +D + K ++ Sbjct: 207 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 266 Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279 EPG AI N L T V + I+D+++ + L Sbjct: 267 HRDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C D G+ ++ GD ++ Y + +N Sbjct: 327 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LQEGDLLAVRSSGAYGFTMSSNYNTRPR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + T + Sbjct: 386 VAEVMVDGNKTYLVRQRE 403 >gi|317401523|gb|EFV82153.1| diaminopimelate decarboxylase [Achromobacter xylosoxidans C54] Length = 430 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 117/388 (30%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + L DT V + +K + + + G S Sbjct: 38 LGTPLYVYSRAALRAAWDTYRSAVGQRPVLVCYGMKANSNLAILKEFARLGAGFDIVSGG 97 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ K A+ + + ++L + D AQ+ ++ Sbjct: 98 ELKRALAAGADPAKIVFSGVGKQVWEMRAALAAGVMCFNVESEAELQRLSDVAQEAGQRA 157 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 LR+NP V ++ G +++ + GL H + Sbjct: 158 RVSLRVNPDVDAQTHPYISTGLKENKFGIPIGAALDAYRSARLLPGLEITGLDCHIGSQL 217 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 + L+ + ++ + LGGG+ D L ++ Sbjct: 218 TDISPYFDALEKLLDLVADLEGIGIRLSHLDLGGGLGIRYNDEMPPSPKALLDHVFQRLQ 277 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES- 278 +++ LEPG ++V N L TTV + +N +VD+++ + L Sbjct: 278 ARGQDHLRLVLEPGRSLVGNAGVLLTTVQYLKHGEARNFAVVDAAMNDLLRPALYDAWHG 337 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 V G C + D ++ D ++ E Y + +N Sbjct: 338 LQPLRPRAGDTIDYDVVGPVCESADWLARQRALV-LEQDDVLALESAGAYGMTMAGNYNT 396 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +D Sbjct: 397 RPRAAEVMVDGGHYHVVRQRETLDDLLR 424 >gi|189219090|ref|YP_001939731.1| diaminopimelate decarboxylase [Methylacidiphilum infernorum V4] gi|189185948|gb|ACD83133.1| Diaminopimelate decarboxylase [Methylacidiphilum infernorum V4] Length = 428 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 57/397 (14%), Positives = 121/397 (30%), Gaps = 35/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ Q ++++ ++ + A+K + + L G S E Sbjct: 26 GTPLYVYSAQTIIDHYKRFDRSLRDIDHFICYAVKANSNQRILKLLVDLGSGFDLVSGGE 85 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHKK 117 + + + + K I + +L + A + Sbjct: 86 LYRVLRAGADPQKCTFAGVGKTQSEIEEALQAGIYSFIVESEEELLEIDKIAAKRSTKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 + R+NP VS ++ G E + G+ H + + Sbjct: 146 VAFRLNPDVSALTHAKITTGTDLNKFGISLDLIDDVFEKCSRLENIHCRGVQMHIGSQIQ 205 Query: 171 SFLCFSAMLKNIEKEFGHFITQI--EWISLGGGIHFTDKD----------------YPVK 212 S F ++ + + E+ +GGGI + + Sbjct: 206 SIDPFLEAIQKVIPWVEKAKKKYGAEFFDIGGGIGIVYEKAMESGTEAWWQERNELLTLN 265 Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPD 271 + +++ + ++I +EPG +V N L + V+ + + K VI+D+++ V Sbjct: 266 RYAEQIVPLVKPLGMKILVEPGRVLVGNAGILVSRVIYVKKGIAKKFVIIDAAMNDLVRP 325 Query: 272 YLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + V G C + D F V+ GD ++ Y Sbjct: 326 AFYEAYHQIVPLKETAHGPLEVVDVVGPVCESSDCFAIDRLLPEVRAGDYLALLSAGAYG 385 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + + + SY D Sbjct: 386 FSMASNYNSRLKPAEVLVWGNQVQLVRKRESYQDLVA 422 >gi|498170|dbj|BAA06561.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus] Length = 377 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 166/368 (45%), Positives = 239/368 (64%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY+ I++ KL+ NL+ A ++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LKTPYFSINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + IGLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEDDVRDVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + ++G+MFH NCENK F +L Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I +FG ++ +++W+S+GGG+ FT Y ++ LK F+EK+ VQ+YLEPGE I+T T Sbjct: 185 ISAQFGEYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFAEKHGVQMYLEPGERIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN+K IVDS+ EAH D L+Y E A+I G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASENGEHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F +FE+P++IG R+ D AGY + + NWFNG+ MP++ + +G I+ + EF Y Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSNGDIQKLNEFDY 364 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 365 SDFKRSLS 372 >gi|325282864|ref|YP_004255405.1| diaminopimelate decarboxylase [Deinococcus proteolyticus MRP] gi|324314673|gb|ADY25788.1| diaminopimelate decarboxylase [Deinococcus proteolyticus MRP] Length = 454 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 62/399 (15%), Positives = 122/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D+ + + G ++ A K F + + + G S Sbjct: 52 GTPLFVYDEALIREQCRRFHRALQKTGLDHQVSYASKAFLCRALARLMAEEGLGLDVVSG 111 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ H + D E A+ + + +++ ++ + A +L Sbjct: 112 GELYTALAAGFDPAHIHLHGNNKLDSELRRALAAGVGCYVVDSLDEVARLNTLAGELGTR 171 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LR+ P V S+ G E + +++E +V G+ FH Sbjct: 172 ARCLLRVTPGVEAHTHDFIQTGAADSKFGLNLASGQASEALRAMLQAEWLDVLGVHFHIG 231 Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + A L + H +++GGG + L Sbjct: 232 SQIFGTEGTRAALARVLAWLAGEREHSGFAARVLNIGGGFGIRYTGADQPQPLEDLLAEV 291 Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 Q++LEPG +IV TV + + V + H+ Sbjct: 292 AAALRAGAAEHRLPLPQLWLEPGRSIVGEAGWTLYTVGTVKQIPGVRNYVSVDGGMSDHL 351 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A T V G+ C +GD+ + GD ++ Sbjct: 352 RTALYGADYEVALANRMHGAPQGTYTVVGKLCESGDVVARDKPLPEPRHGDLLAVSCTGA 411 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y+ + +N + P + + +R +Y+D Sbjct: 412 YHYAMSSRYNAMLRPAVVFVKDGEAREVVRRETYDDLLR 450 >gi|219850725|ref|YP_002465157.1| diaminopimelate decarboxylase [Methanosphaerula palustris E1-9c] gi|219544984|gb|ACL15434.1| diaminopimelate decarboxylase [Methanosphaerula palustris E1-9c] Length = 429 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 58/395 (14%), Positives = 129/395 (32%), Gaps = 31/395 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ + ++ + + + +L A K +F L G S Sbjct: 29 GTPLYVTSEDRIRTQMQGYRDALSSYYSDISVLYAAKANGNLAVFQILASEGAGADVFSS 88 Query: 61 YEVMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 EV L +N + ++ + + +++ +L++ A + K Sbjct: 89 GEVALALKAGMDPHKLLFNGSSKTLMDLALAVELGIRVSVDSLDELHQLDAVAAEAGKVA 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169 +I R+NP++ S+ G + + + + G+ H + Sbjct: 149 EIAFRVNPALEVPTHPKIATGLASSKFGIPHQQIPAAYAEALACSNIKPVGIHCHIGSQI 208 Query: 170 KSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEF 221 F+ + + + ++E++ LGGG+ ++ + Sbjct: 209 LDVTPFAKAAEVMVRIAREITDLGIKLEFLDLGGGLGIPYNHTSETAPSPAEYAAAVMPV 268 Query: 222 SE------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275 ++++EPG ++V ++T L TV + + K V VD+ + + Sbjct: 269 FLAGIKECNIHPELWVEPGRSLVADSTVLLATVNSVKKAHKTFVNVDAGFNLLIRPVMYD 328 Query: 276 QESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + N T V G C GD+ V+ GD ++ D Y + Sbjct: 329 SYHEIVVANRADQPIAGTYTVAGPICETGDLLAVDRALPGVQEGDLVAVLDTGAYGFSMS 388 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + +N + R + +D ++ Sbjct: 389 SQYNSRPRCAEVLIRGGDAALMRRAETVDDLLASM 423 >gi|303237287|ref|ZP_07323857.1| carboxynorspermidine decarboxylase [Prevotella disiens FB035-09AN] gi|302482674|gb|EFL45699.1| carboxynorspermidine decarboxylase [Prevotella disiens FB035-09AN] Length = 387 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 127/374 (33%), Positives = 203/374 (54%), Gaps = 13/374 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++ KL NNL + K A ++++LA K +A W F +Y+ TT+SSLYE Sbjct: 14 PTYILEEAKLRNNLSLISKVAKEADIEIILAFKAYALWRTFPIFREYIKATTASSLYEAK 73 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRI 122 LG ++FG TH ++ AY D EID + ++FN++SQ N+F ++++K+ IGLR+ Sbjct: 74 LGFQEFGAPTHTFSPAYTDYEIDEIARCSSHLVFNSLSQYNRFHAHIKQINKETSIGLRV 133 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S + +L +P P +R G ++ ++ G H +CEN S F L +I Sbjct: 134 NPEYSEVETLLYNPCAPGTRFGVSADKLPKTLPNDIEGFHVHCHCENGS-DVFERTLAHI 192 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E++F + +QI+WI+ GGG T KDY + + LK F EKY ++ LEPG A T Sbjct: 193 EQKFSPWFSQIKWINFGGGHLMTRKDYDIPRLIKLLKTFKEKYPWLKVILEPGSAFAWQT 252 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP--------NTGPYTAMV 292 +L ++DI E+ + + S H+PD L T+ T + Sbjct: 253 GSLVAQIVDIVEDKGIQTAILNVSFTCHMPDCLEMPYQPTVRNAACVEEIEQHATNTYRL 312 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G SCL+GD G +HF+ ++IG+ I FED+ Y + N FNGI P IA+ + + ++ Sbjct: 313 GGNSCLSGDWLGYWHFDHALEIGENIIFEDMLHYTTVKTNMFNGITHPGIALLHPNNELE 372 Query: 353 AIREFSYNDYYNNL 366 +R+++Y DY + Sbjct: 373 ILRQYAYEDYKQRM 386 >gi|171910002|ref|ZP_02925472.1| CARBOXYNORSPERMIDINE DECARBOXYLASE [Verrucomicrobium spinosum DSM 4136] Length = 383 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 161/377 (42%), Positives = 239/377 (63%), Gaps = 14/377 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TPYYLID+ ++L ++ +++ +G K +LALKCF++W FD + QY+ GTTSSSL+ Sbjct: 3 LSTPYYLIDEARMLPAMERIRLVQERSGAKCVLALKCFSSWCAFDFMRQYLVGTTSSSLW 62 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LGHEKFGGETH Y+VAY D EI V CD IIFN++ QLN+ A +GLR Sbjct: 63 ETRLGHEKFGGETHGYSVAYADDEIAEVAGYCDKIIFNSLGQLNRLGHHA--AGISMGLR 120 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP + +S L++P +SRLG + ++ E + G M H NC+N F + L Sbjct: 121 LNPGIGHSCSELSNPVCQYSRLGVRAEELPEDIGSRIQGAMIHVNCDNDDLASFCSQLDV 180 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 IE+ FG + ++W+S GGGI FTD+ YP+ DFC+RL+EFS+++S++IYLEPGEA VT++ Sbjct: 181 IEERFGKLLPHLQWLSFGGGIAFTDEAYPIDDFCRRLREFSQRHSLEIYLEPGEAAVTHS 240 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT------------GPYT 289 T+L VLD+ EN ++VD+ VE H+ D L Y + + + Sbjct: 241 TSLVVKVLDVVENEVPTLVVDAGVETHLLDVLTYGYTPEVDGAEPLARDAKDLGGRAGHV 300 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 +CGR+CLAGD FG + F +PV +GD + F +V GY++ +KN+FNGI MP I +N+ G Sbjct: 301 YRICGRTCLAGDHFGNYVFPRPVALGDELRFPNVGGYSMVKKNYFNGIRMPAIYHRNLSG 360 Query: 350 TIKAIREFSYNDYYNNL 366 ++ +++ +Y D+ L Sbjct: 361 ELRLVQQPTYEDFREAL 377 >gi|186477550|ref|YP_001859020.1| diaminopimelate decarboxylase [Burkholderia phymatum STM815] gi|184194009|gb|ACC71974.1| diaminopimelate decarboxylase [Burkholderia phymatum STM815] Length = 420 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 121/387 (31%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + +A+K + + + + G S E Sbjct: 28 GTPLYVYSRDALTKAWHAYADACAGRRATVHVAVKANSNLAVLNLFARMGAGFDIVSGGE 87 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + E ++ K DA+ + ++ +L++ A Sbjct: 88 LARVLAAGGKAENTVFSGVGKSVAEMRDALAAGVKCFNVESIPELDRLNAVAGEMGKKAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + +V G+ H + Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFDDARATYRAAAAMKHLDVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + + + I+ + +GGG+ T D D ++ ++ Sbjct: 208 EVAPYLDAVDKLLELVAQIEADGVTIKHVDVGGGLGITYDDETPPDIGDFVRTLLDRIEA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 ++Y EPG ++V N L T V + KN IVD+++ + Sbjct: 268 RGHGHREVYFEPGRSLVGNAGMLLTRVEFLKTGAEKNFAIVDAAMNDLARPAMYEAYHAI 327 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + + + G C +GD G V+ GD ++ Y + +N Sbjct: 328 EPVVQRDGARHVYDIVGPVCESGDWLGRERRLA-VEPGDLLAIRSAGAYGFAMSSNYNTR 386 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + D + Sbjct: 387 ARAAEVMVDGDKAYVVRKREEVKDLFA 413 >gi|83595885|gb|ABC25247.1| diaminopimelate decarboxylase [uncultured marine bacterium Ant4D3] Length = 421 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 114/378 (30%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L N + + A+K + + + L Q G S+ E Sbjct: 30 GTPTYVYSRDTLERNYVAYSQALEGCEHLVCYAVKANSNIAVLNVLAQLGAGFDIVSVGE 89 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ A+ + ++L + ++ A ++ Sbjct: 90 LERVLVAGADPKRIVFSGVGKQTHEMQRALEVGVHCFNVESEAELERLQNVAAGMNCIAP 149 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LRINP V ++ G V G+ H + Sbjct: 150 VSLRINPDVDAKTHPYISTGLKENKFGIGIDQAPAAYAQAAAMAHIKVIGVDCHIGSQLT 209 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFC---QRLKEFSEK 224 S + + + IE + LGGG+ D R++ Sbjct: 210 SIDPYLDAMDRLFGLIDTIAAQGIAIEHLDLGGGLGVCYGDEEPPAIADFMARVRAHLGD 269 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281 + + EPG +I + L T V I N IVD+++ + L I Sbjct: 270 RKLALVFEPGRSICADAGVLLTRVEYIKNNQDKYFAIVDAAMNDLIRPALYSAWQDIIPV 329 Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + N+ + + G C D G+ ++ D ++ Y + +N N Sbjct: 330 NLHSNSQAHNFDIVGPICETSDFLGKDRNLA-IEANDLLAVCSSGAYGFAMASNYNSRNR 388 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + + Sbjct: 389 AAEVMVDGNKSHLIGERE 406 >gi|197336405|ref|YP_002157271.1| diaminopimelate decarboxylase [Vibrio fischeri MJ11] gi|197317895|gb|ACH67342.1| diaminopimelate decarboxylase [Vibrio fischeri MJ11] Length = 417 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 108/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + N + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWKAFDNSVGNHPHLVCYAVKANSNIGVLNALARLGSGFDIVSQGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + ++ K D A+ + +L + A + Sbjct: 87 LERVVAAGGDPTKVVFSGVGKTADEMRRALELKIKCFNVESEPELERLNAVAAEMGVIAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V ++ G E +V G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPEVYKFAQSLPNLDVQGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + I + +GGG+ P + L +E Sbjct: 207 DIEPFIDATDRLLALIDDLKAQGVNIRHLDVGGGLGVVYRDELPPQPSEYATALLGRLAE 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGILVTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C GD G+ ++ D ++ Y + +N Sbjct: 327 VVPHEGDAQNYDLVGPICETGDFLGKDRALV-LEANDLLAVRSSGAYGFVMSSNYNTRCR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + Sbjct: 386 AAEIMVDGGDAHLVRKRE 403 >gi|323495294|ref|ZP_08100375.1| diaminopimelate decarboxylase [Vibrio brasiliensis LMG 20546] gi|323310471|gb|EGA63654.1| diaminopimelate decarboxylase [Vibrio brasiliensis LMG 20546] Length = 417 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 109/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWHAFDKSVGEHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGEPSKVVFSGVGKTEAEMKRALELGIKCFNVESEPELERLNKVAGELGKKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V + ++ G + +V G+ H + Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFERAPAVYKFAQSLEHLDVRGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + IE + +GGG+ P L Sbjct: 207 DIEPFIDATDRLLALIDDLKSQGVTIEHLDVGGGLGVVYRDELPPEPSDYAKALLGRLEN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGVLLTKVEFLKPTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P T + G C GD G+ ++ D ++ Y + +N + Sbjct: 327 VCPREGEPVTYDLVGPICETGDFLGKDRALV-IEENDLLAVRSAGAYGFVMSSNYNTRSR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + + Sbjct: 386 AAEVMVDGNQAHLVRQRE 403 >gi|39937799|ref|NP_950075.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris CGA009] gi|39651659|emb|CAE30181.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris CGA009] Length = 421 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 110/390 (28%), Gaps = 28/390 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSSATLERHYRVFTEAFAGLDALVCYAMKANSNQSVLRTLAKLGAGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ K + D + + +L + A + + Sbjct: 85 ELQRALAAGIPPSKIVFSGVGKTEAELRAALDHDIKCLNVESEPELEQLSRIAVETGRTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 LR+NP V + ++ G + E + V G+ H + Sbjct: 145 RISLRVNPDVDSGTHAKISTGKSENKFGIPIRHAREVYARAAKLPGIQVTGVDVHIGSQI 204 Query: 170 KSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 + + + GGG+ + + + +K Sbjct: 205 IDLAPMEAAFRKVAEFIHVLRGDGHTVNHVDFGGGLGIPYYEDRDAPPEPFAYAEMVKRV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + EPG IV N L V+ + + K VI+D+++ + LY+ Sbjct: 265 THNLGCTLLFEPGRMIVGNAGILVAKVIYVKHGDGKTFVIIDAAMNDLIRPT-LYEAYHE 323 Query: 281 IYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I P P A V G C GD +K GD I+ Y + + Sbjct: 324 ILPVAAPAPGVATMVADVVGPVCETGDYLALDRKLPELKAGDLIAIMTAGAYGAVQACTY 383 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D Sbjct: 384 NTRALVPEVLVKDDQVAVVRPRIEVEQLIA 413 >gi|270307899|ref|YP_003329957.1| diaminopimelate decarboxylase [Dehalococcoides sp. VS] gi|270153791|gb|ACZ61629.1| diaminopimelate decarboxylase [Dehalococcoides sp. VS] Length = 434 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 120/399 (30%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ + N A + A K F + L + S Sbjct: 34 GTPLYIFDESTIRQNCRDFKREFSRRYADSSVSYASKAFLHPALLKILAEEGMSLDVVSG 93 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ + + F + ++ K + A+ + I+ ++ ++ A + Sbjct: 94 GELSIANNAGFPMDMVYFHGNNKSAEELRLALRLHVGRIVVDSFDEIKLLSKLADESGHI 153 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168 I LR+ P V + S+ G E+ N+ G FH + Sbjct: 154 PDILLRLTPGVDAHTHHHITTGKLDSKFGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQ 213 Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRL-- 218 +L + + IE + +GGG + V + + + Sbjct: 214 IFETQPFLDAIDLVLDFAAQVQERYGFDIEELDIGGGYGVQYEIDKPAPAVSVYAEAIGA 273 Query: 219 -----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + + +EPG AI+ TV I + + ++ Sbjct: 274 KIVAKCHSLKLAPPSLNIEPGRAIIAQAGVALYTVGVIKDIPGIRQYASVDGGMGDNIRP 333 Query: 272 YLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + + + + G+ C +GDI ++ GD ++ Y Sbjct: 334 ALYEAKYEAVVASNVQSAEKQKVTIAGKFCESGDILITDIELPSLRAGDILAVPCCGAYC 393 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + + +NG P + + R + D + L Sbjct: 394 LPMSSNYNGYQRPAVVILKNGEDRLIRRRETVEDL-SRL 431 >gi|313676255|ref|YP_004054251.1| diaminopimelate decarboxylase [Marivirga tractuosa DSM 4126] gi|312942953|gb|ADR22143.1| diaminopimelate decarboxylase [Marivirga tractuosa DSM 4126] Length = 402 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 25/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D K+ + + +KL A K + + + ++ G S+ E Sbjct: 14 GTPLYVYDADKIASQIKRLNDAFSGINLKLKYATKALSNVSVLKWMKKHGTGLDVVSIQE 73 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 LG F + Y + + I + +S L +F + + + Sbjct: 74 AYLGLKAGFEPKDILYTPNCVSIDEIIEAVDLGLMINIDNISILEQFGHRYHD-TVPVCI 132 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174 R+NP + S+ G IE+ NV GL H + Sbjct: 133 RLNPHIMAGGNSKISTGHIDSKFGISILQMRHLLRVIENYNINVVGLHIHTGSDILDSEV 192 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI----- 229 F + I E I++I G G K+ V + L + K Sbjct: 193 FLRGTE-IIFEAAEDFPNIDFIDFGSGFKVAYKEGDVTTDIEELGKEVSKRFKAFCKSRG 251 Query: 230 -----YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + EPG+ +V+ + V I + + + H+ ++Y I Sbjct: 252 KDLELWFEPGKFLVSEAGYFLSKVNVIKTTPATVFVGLDTGMNHLLRPMMYDAYHHIENI 311 Query: 285 TGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + P V G C D FG VK GD I+ ++ Y + + +N P Sbjct: 312 SNPSDTQRVYTVVGYICET-DTFGTDRRLSEVKQGDIIAIKNAGAYGFSMASNYNSRYRP 370 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + S +D N Sbjct: 371 AEVLVHEGKDQLVRKRESLDDLLRN 395 >gi|91975418|ref|YP_568077.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisB5] gi|91681874|gb|ABE38176.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisB5] Length = 421 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 53/389 (13%), Positives = 106/389 (27%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHYRVFTEALSGVDALVCYAMKANSNQSVLRTLAKLGAGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ K D + + +L A + + Sbjct: 85 ELKRALAAGIPPGKIVFSGVGKTEAELRAALAHDIKCLNVESEPELELLSRLAVETGRIA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 +R+NP V + ++ G + + + V G+ H + Sbjct: 145 RISIRVNPDVDSGTHAKISTGKSENKFGIPIRHARDVYARAAKLPGIQVTGVDVHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 + + + I + GGG+ + + + +K Sbjct: 205 IDLAPMESAFRLVAEFVHVLRGDGHTISHVDFGGGLGIPYYEDRAAPPEPFSYAEMVKRI 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + EPG IV N L V+ + + K V++D+++ + L Sbjct: 265 THNLGCTLMFEPGRTIVGNAGILVAQVIYVKHGDGKTFVVIDAAMNDLIRPTLYEAYHEI 324 Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + T V G C GD +K GD I+ Y + +N Sbjct: 325 LPVAEPAPGVKMITGDVVGPVCETGDYLALDRQLPELKSGDLIAIMTAGAYGAVQACTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D Sbjct: 385 TRALVPEVLVKDDQYAVVRPRIEVEQLIA 413 >gi|147919802|ref|YP_686452.1| diaminopimelate decarboxylase [uncultured methanogenic archaeon RC-I] gi|110621848|emb|CAJ37126.1| diaminopimelate decarboxylase [uncultured methanogenic archaeon RC-I] Length = 427 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 69/390 (17%), Positives = 127/390 (32%), Gaps = 29/390 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ +L +N GV + A K + Q G + S E Sbjct: 32 GTPLYVTNEDRLRDNYRRFSAAF--PGVSIFFAAKSNNNLVVQRIFAQEGAGADAFSDGE 89 Query: 63 VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119 + L E + D E+ + + + ++ +L A+K K++ Sbjct: 90 IYLARMAGIPAEKILFTGNSKTDAELQYAIDSGVMVSVDSRDELLALSKLAKKAKKEVKI 149 Query: 120 -LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171 R+NP VS S+ G KD + + N G+ H + Sbjct: 150 AFRVNPDVSADAHPKLATGLKVSKFGIPTKDIVSIYKEAKKLPGVNPVGIHCHIGSQILE 209 Query: 172 FLCFSAMLKNIEKEFGHF--ITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225 ++ + +EW+ LGGG K KD+ + + + Sbjct: 210 TAPYTEATNKMMDLVEQISGFIDLEWVDLGGGFGIPYQKGTKVPTPKDWAKAILPTFKAR 269 Query: 226 SVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 +I +LEPG +V ++T L V + + KN V D+ + + Sbjct: 270 CKKIGISPELHLEPGRYMVADSTVLLMRVNTVKKAYKNFVGTDAGFNTLIRPAMYDSYHE 329 Query: 280 TIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + N V G C +GDI V+ D ++ D Y + + Sbjct: 330 AVIANKAGSPAKGEYTVVGPICESGDILATDRQLPVVEKDDIVALLDAGAYGFCMSSQYV 389 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 G + + + +++D N Sbjct: 390 GRPRCAEVLVHNGKADLIRKRETFDDLLQN 419 >gi|152979892|ref|YP_001355061.1| diaminopimelate decarboxylase [Janthinobacterium sp. Marseille] gi|151279969|gb|ABR88379.1| diaminopimelate decarboxylase [Janthinobacterium sp. Marseille] Length = 427 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 61/400 (15%), Positives = 122/400 (30%), Gaps = 36/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG-----VKLLLALKCFAAWGMFDTLNQYMDGTTS 57 +P Y+ K L+ N K G + ++K + + + L + G Sbjct: 26 GSPTYIYSKAALVENFSAYADACKQHGRNDETALVCYSVKSNSNLAVLNLLGKLGSGFDI 85 Query: 58 SSLYEVMLGHE--KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--Q 112 S E++ + V ++ A+ + ++ +L++ A Sbjct: 86 VSGGELLRVLAAGGSPRKVIFSGVGKSREEMQLALSHDILCFNVESIPELHRLNAVAAEM 145 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHN 165 + LR+NP+V ++ G +D +V G+ H Sbjct: 146 GKKASVSLRVNPNVDAKTHPYISTGLKDNKFGIAYEDTLTTYRVAAALPNIDVVGIDCHI 205 Query: 166 NCENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKD--------YPVKDF 214 + + + + + +GGGI + Y + F Sbjct: 206 GSQLLDDAPLLEAVDKLIELIDTLDAEGIHLHHLDIGGGIGINYDNDQPVAVGDYLARLF 265 Query: 215 CQRLKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVP 270 + +K+ EPG +IV N L T V I KN IVD+++ + Sbjct: 266 AKIDAWRKQKHGGAPIKVLFEPGRSIVGNAGILLTEVQYIKHGETKNFAIVDAAMNDLMR 325 Query: 271 DYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + T V G C +GD ++ GD ++ Y Sbjct: 326 PAMYEAWHGVLPVKQSTAAAATYDVVGPVCESGDWLARSRELA-IEEGDLLAIMSAGAYG 384 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + +N + + D + + +D + S Sbjct: 385 MTMSSNYNTRGRAAEVMVDGDKVHLIRKREAASDLFALES 424 >gi|308174124|ref|YP_003920829.1| diaminopimelate decarboxylase [Bacillus amyloliquefaciens DSM 7] gi|307606988|emb|CBI43359.1| diaminopimelate decarboxylase [Bacillus amyloliquefaciens DSM 7] Length = 439 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 64/399 (16%), Positives = 128/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + ++ A K F++ M Q S Sbjct: 30 GTPLYVYDVALIRERAKSFKQAFIDADLKAQVAYASKAFSSVAMIQLAEQEGLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F + ++ ++ A+ I+ + +++ + +K Sbjct: 90 GELFTAVSAGFPADRIHFHGNNKSREELQMALDHQIGCIVVDNFHEISLLAELCRKSGRA 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G + ++S+ + G+ H Sbjct: 150 MDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQIEKAIEQVLQSDHIRLLGVHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F + I + + E ++LGGG + Sbjct: 210 SQIFDTAGFVLAAEKIFAKLNEWRESFGFVSEVLNLGGGFGIRYTEEDEPLHPAVYVEKI 269 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + +KE +E Y+ I ++EPG ++V + T T+ E VD + ++ Sbjct: 270 IEAVKENAELYAFDIPEIWIEPGRSLVGDAGTTLYTIGSQKEVPGTRKYAAVDGGMSDNI 329 Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ VK GD ++ Sbjct: 330 RPALYQAKYEAVSANRISEHHDTTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + I+ +Y D Sbjct: 390 YGYSMANNYNRIPRPAVVFVEDGEAHLVIKRETYEDIVK 428 >gi|328552744|gb|AEB23236.1| diaminopimelate decarboxylase [Bacillus amyloliquefaciens TA208] gi|328912458|gb|AEB64054.1| diaminopimelate decarboxylase [Bacillus amyloliquefaciens LL3] Length = 439 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 64/399 (16%), Positives = 128/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + ++ A K F++ M Q S Sbjct: 30 GTPLYVYDVALIRERAKSFKQAFIDADLKAQVAYASKAFSSVAMIQLAEQEGLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F + ++ ++ A+ I+ + +++ + +K Sbjct: 90 GELFTAVSAGFPADRIHFHGNNKSREELQMALDHQIGCIVVDNFHEISLLAELCRKSGRA 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G + ++S+ + G+ H Sbjct: 150 MDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQIEKAIEQVLQSDHIRLLGVHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F + I + + E ++LGGG + Sbjct: 210 SQIFDTAGFVLAAEKIFAKLNEWRESFGFVSEVLNLGGGFGIRYTEEDEPLHPAVYVEKI 269 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + +KE +E Y+ I ++EPG ++V + T T+ E VD + ++ Sbjct: 270 IEAVKENAELYAFDIPEIWIEPGRSLVGDAGTTLYTIGSQKEVPGTRKYAAVDGGMSDNI 329 Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ VK GD ++ Sbjct: 330 RPALYQAKYEAVSANRISEHHDTTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + I+ +Y D Sbjct: 390 YGYSMANNYNRIPRPAVVFVEDGEAHLVIKRETYEDIVK 428 >gi|297787806|pdb|3N2B|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Diaminopimelate Decarboxylase (Lysa) From Vibrio Cholerae. gi|297787807|pdb|3N2B|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Diaminopimelate Decarboxylase (Lysa) From Vibrio Cholerae. gi|297787808|pdb|3N2B|C Chain C, 1.8 Angstrom Resolution Crystal Structure Of Diaminopimelate Decarboxylase (Lysa) From Vibrio Cholerae. gi|297787809|pdb|3N2B|D Chain D, 1.8 Angstrom Resolution Crystal Structure Of Diaminopimelate Decarboxylase (Lysa) From Vibrio Cholerae Length = 441 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 110/378 (29%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S+ E Sbjct: 51 GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 110 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ + +L + A +L Sbjct: 111 LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAP 170 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G + +V+G+ H + Sbjct: 171 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNLDVHGIDCHIGSQLT 230 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F + I + +GGG+ +D + K ++ Sbjct: 231 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 290 Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279 EPG AI N L T V + I+D+++ + L Sbjct: 291 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 350 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C D G+ ++ GD ++ Y + +N Sbjct: 351 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LQEGDLLAVRSSGAYGFTMSSNYNTRPR 409 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + T + Sbjct: 410 VAEVMVDGNKTYLVRQRE 427 >gi|15640156|ref|NP_229783.1| diaminopimelate decarboxylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587729|ref|ZP_01677490.1| diaminopimelate decarboxylase [Vibrio cholerae 2740-80] gi|121728316|ref|ZP_01681347.1| diaminopimelate decarboxylase [Vibrio cholerae V52] gi|147674363|ref|YP_001218294.1| diaminopimelate decarboxylase [Vibrio cholerae O395] gi|153214838|ref|ZP_01949646.1| diaminopimelate decarboxylase [Vibrio cholerae 1587] gi|153803072|ref|ZP_01957658.1| diaminopimelate decarboxylase [Vibrio cholerae MZO-3] gi|153818954|ref|ZP_01971621.1| diaminopimelate decarboxylase [Vibrio cholerae NCTC 8457] gi|153822335|ref|ZP_01975002.1| diaminopimelate decarboxylase [Vibrio cholerae B33] gi|153826290|ref|ZP_01978957.1| diaminopimelate decarboxylase [Vibrio cholerae MZO-2] gi|153830026|ref|ZP_01982693.1| diaminopimelate decarboxylase [Vibrio cholerae 623-39] gi|227080361|ref|YP_002808912.1| diaminopimelate decarboxylase [Vibrio cholerae M66-2] gi|229508403|ref|ZP_04397907.1| diaminopimelate decarboxylase [Vibrio cholerae BX 330286] gi|229508916|ref|ZP_04398406.1| diaminopimelate decarboxylase [Vibrio cholerae B33] gi|229515840|ref|ZP_04405298.1| diaminopimelate decarboxylase [Vibrio cholerae TMA 21] gi|229517030|ref|ZP_04406476.1| diaminopimelate decarboxylase [Vibrio cholerae RC9] gi|229520083|ref|ZP_04409511.1| diaminopimelate decarboxylase [Vibrio cholerae TM 11079-80] gi|229525021|ref|ZP_04414426.1| diaminopimelate decarboxylase [Vibrio cholerae bv. albensis VL426] gi|229527133|ref|ZP_04416527.1| diaminopimelate decarboxylase [Vibrio cholerae 12129(1)] gi|229606676|ref|YP_002877324.1| diaminopimelate decarboxylase [Vibrio cholerae MJ-1236] gi|254291934|ref|ZP_04962715.1| diaminopimelate decarboxylase [Vibrio cholerae AM-19226] gi|254851509|ref|ZP_05240859.1| diaminopimelate decarboxylase [Vibrio cholerae MO10] gi|255743922|ref|ZP_05417877.1| diaminopimelate decarboxylase [Vibrio cholera CIRS 101] gi|262151161|ref|ZP_06028300.1| diaminopimelate decarboxylase [Vibrio cholerae INDRE 91/1] gi|262167030|ref|ZP_06034747.1| diaminopimelate decarboxylase [Vibrio cholerae RC27] gi|297581834|ref|ZP_06943755.1| diaminopimelate decarboxylase [Vibrio cholerae RC385] gi|298501107|ref|ZP_07010907.1| diaminopimelate decarboxylase [Vibrio cholerae MAK 757] gi|13124077|sp|Q9KVL7|DCDA_VIBCH RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|9654525|gb|AAF93302.1| diaminopimelate decarboxylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548028|gb|EAX58106.1| diaminopimelate decarboxylase [Vibrio cholerae 2740-80] gi|121629446|gb|EAX61875.1| diaminopimelate decarboxylase [Vibrio cholerae V52] gi|124115081|gb|EAY33901.1| diaminopimelate decarboxylase [Vibrio cholerae 1587] gi|124121391|gb|EAY40134.1| diaminopimelate decarboxylase [Vibrio cholerae MZO-3] gi|126510516|gb|EAZ73110.1| diaminopimelate decarboxylase [Vibrio cholerae NCTC 8457] gi|126520161|gb|EAZ77384.1| diaminopimelate decarboxylase [Vibrio cholerae B33] gi|146316246|gb|ABQ20785.1| diaminopimelate decarboxylase [Vibrio cholerae O395] gi|148874511|gb|EDL72646.1| diaminopimelate decarboxylase [Vibrio cholerae 623-39] gi|149739958|gb|EDM54137.1| diaminopimelate decarboxylase [Vibrio cholerae MZO-2] gi|150422144|gb|EDN14110.1| diaminopimelate decarboxylase [Vibrio cholerae AM-19226] gi|227008249|gb|ACP04461.1| diaminopimelate decarboxylase [Vibrio cholerae M66-2] gi|227011873|gb|ACP08083.1| diaminopimelate decarboxylase [Vibrio cholerae O395] gi|229335364|gb|EEO00847.1| diaminopimelate decarboxylase [Vibrio cholerae 12129(1)] gi|229338602|gb|EEO03619.1| diaminopimelate decarboxylase [Vibrio cholerae bv. albensis VL426] gi|229342871|gb|EEO07861.1| diaminopimelate decarboxylase [Vibrio cholerae TM 11079-80] gi|229346093|gb|EEO11065.1| diaminopimelate decarboxylase [Vibrio cholerae RC9] gi|229347103|gb|EEO12064.1| diaminopimelate decarboxylase [Vibrio cholerae TMA 21] gi|229354033|gb|EEO18966.1| diaminopimelate decarboxylase [Vibrio cholerae B33] gi|229354676|gb|EEO19598.1| diaminopimelate decarboxylase [Vibrio cholerae BX 330286] gi|229369331|gb|ACQ59754.1| diaminopimelate decarboxylase [Vibrio cholerae MJ-1236] gi|254847214|gb|EET25628.1| diaminopimelate decarboxylase [Vibrio cholerae MO10] gi|255738405|gb|EET93795.1| diaminopimelate decarboxylase [Vibrio cholera CIRS 101] gi|262024548|gb|EEY43232.1| diaminopimelate decarboxylase [Vibrio cholerae RC27] gi|262031055|gb|EEY49680.1| diaminopimelate decarboxylase [Vibrio cholerae INDRE 91/1] gi|297533928|gb|EFH72768.1| diaminopimelate decarboxylase [Vibrio cholerae RC385] gi|297540141|gb|EFH76202.1| diaminopimelate decarboxylase [Vibrio cholerae MAK 757] Length = 417 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 110/378 (29%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S+ E Sbjct: 27 GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ + +L + A +L Sbjct: 87 LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G + +V+G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNLDVHGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F + I + +GGG+ +D + K ++ Sbjct: 207 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 266 Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279 EPG AI N L T V + I+D+++ + L Sbjct: 267 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C D G+ ++ GD ++ Y + +N Sbjct: 327 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LQEGDLLAVRSSGAYGFTMSSNYNTRPR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + T + Sbjct: 386 VAEVMVDGNKTYLVRQRE 403 >gi|262198680|ref|YP_003269889.1| diaminopimelate decarboxylase [Haliangium ochraceum DSM 14365] gi|262082027|gb|ACY17996.1| diaminopimelate decarboxylase [Haliangium ochraceum DSM 14365] Length = 425 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 56/393 (14%), Positives = 102/393 (25%), Gaps = 30/393 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ L +L + ++K + L Q G S Sbjct: 25 VGTPVYVYSHATLTRHLQVFDAALSGVPHLVCFSVKSNPNLAVLRLLFQLGAGADIVSGG 84 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHK 116 E+ ++ K A + +L+ A Sbjct: 85 ELARVLRAGGDPAKVVFSGVGKTDAEIAAALRAGILAFNVESEEELHAIDAVAADMGARA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169 + LRINP V S+ G + ++ G+ H + Sbjct: 145 PVSLRINPDVDAQTHPYIATGLKESKFGIAMAEARRVYALARTLAHVDIVGVDCHIGSQL 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY---PVKDFCQR------ 217 FS + + + ++ +GGG+ + P + Sbjct: 205 TRTDPFSDAVSRLLGLIEELHADGVALRYLDIGGGLGIPYEGDGAAPPPSPAEYGDAIKS 264 Query: 218 -LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLY 275 L + I EPG I N L T VL K+ +VD+++ + L Sbjct: 265 ALAPLKLPTPLTIICEPGRVITGNAGALLTRVLYRKHAEAKHFTVVDAAMNDLIRPSLYG 324 Query: 276 QESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 V G C +GD ++ G+ ++ Y Sbjct: 325 SYHPMRPVVRAAQRPQQVTDVVGPICESGDFLARDRELPALERGELLAIGAAGAYGFAMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + D S + Sbjct: 385 SNYNSRPRAAEVMVRGDRFAVVRARESVEQLFA 417 >gi|224438040|ref|ZP_03658979.1| diaminopimelate decarboxylase [Helicobacter cinaedi CCUG 18818] gi|313144485|ref|ZP_07806678.1| diaminopimelate decarboxylase [Helicobacter cinaedi CCUG 18818] gi|313129516|gb|EFR47133.1| diaminopimelate decarboxylase [Helicobacter cinaedi CCUG 18818] Length = 436 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 66/397 (16%), Positives = 122/397 (30%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP Y+ D QK+ + + + ALK + + L G S+ E Sbjct: 14 KTPLYVYDLQKISSAFLRLKEAFRARKSLICYALKANSNLSIIHHLGTLGSGADCVSIGE 73 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119 V ++ K D + + +L + + A+ L+K Sbjct: 74 VRRALRAGILKYKIIFSGVGKQDNEIQEALQSDILFLNVESEGELGRIESIAKSLNKVAR 133 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCE-- 168 + R+NP++ ++ G + S G+ FH + Sbjct: 134 ISIRVNPNIDAKTHPYISTGLSENKFGVDIQQAKAMYIFAKNSPHIEPVGIHFHIGSQLT 193 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 + + + + +++ +GGGI ++ D+ Q + E Sbjct: 194 DIEPIKEAAHKVAQLAHSLIALKIDLKFFDVGGGIGIRYEEENLINPYDYAQAILEALYG 253 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +V + L T VL N K VI D+++ + LY + I Sbjct: 254 LDLTIICEPGRFLVGESGVLLTRVLYEKHNGEKRFVITDAAMNDLMRPT-LYHATHKIEY 312 Query: 284 NTGPYT----------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 V G C +GD + + GD + E+V Y Sbjct: 313 VEKIQNAEHIGERSVESSLCDMCDVVGPICESGDYLAKNIALPKLTHGDLLKIENVGAYG 372 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P V + + Sbjct: 373 YSMASNYNTRLRPAEVVIENGRARLIKNRECFESLIS 409 >gi|119776382|ref|YP_929122.1| diaminopimelate decarboxylase [Shewanella amazonensis SB2B] gi|119768882|gb|ABM01453.1| diaminopimelate decarboxylase [Shewanella amazonensis SB2B] Length = 414 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 62/382 (16%), Positives = 110/382 (28%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDGAVASHPHLICYAVKANSNLAVLNVLARLGSGFDIVSGGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + E ++ K + N + ++L + A +L K Sbjct: 86 LSRVLEAGGDPAKVVFSGVGKTVAEMELALNTGIMCFNLESGAELELLNEVAGRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G ++ + V G+ H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIPMEEAEALFARAAALPNLAVKGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + + IE +GGG+ T + + E Sbjct: 206 ELKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYNGETPPHPDVYAAAILEKLNG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ EPG AI N T VL +N K VIVD ++ + L I Sbjct: 266 RPLKLIFEPGRAIAANAGIFVTQVLYTKDNGDKRFVIVDGAMNDLIRPSLYGAWQNIIPA 325 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 V G C GD G+ GD + Y + +N Sbjct: 326 VKTNEPTTRCDVVGPVCETGDFLGKDRELA-AGSGDLLVVRSAGAYGFTMASNYNTRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + D + Sbjct: 385 AELMVDGDKAYVVREREKLSQL 406 >gi|90420245|ref|ZP_01228153.1| diaminopimelate decarboxylase [Aurantimonas manganoxydans SI85-9A1] gi|90335579|gb|EAS49329.1| diaminopimelate decarboxylase [Aurantimonas manganoxydans SI85-9A1] Length = 424 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 63/388 (16%), Positives = 111/388 (28%), Gaps = 25/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + + A+K + + TL G S Sbjct: 25 VGTPFYCYSTATLTRHYTVFAEAFADIDALVCYAMKANSNQAVLKTLAALGAGADVVSGG 84 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E++ E ++ K A+ S + +L + A Sbjct: 85 ELLRALRAGIPAEKIMFSGVGKSVPEIDLALASGIFCFNIESEPELEMIAARAVAAGRTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + RINP V + + G + + V+G+ H + Sbjct: 145 HVSFRINPDVDARTHAKISTGKKSDKFGIAYERAEAVYDRARSLPGIAVSGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + I + LGGG+ + + +K Sbjct: 205 VELEPFDQAFERLAGLVRRLRGAGHDIAHVDLGGGLGVPYSRTNTPPPAPPAYAEIVKRH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 ++ EPG I N L T V+ + E K VIVD+ + + L Sbjct: 265 VRDLDCKVVFEPGRLIAANAGILVTRVVYVKEAEGKTFVIVDAGMNDLIRPTLYDAWHDI 324 Query: 281 IYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 P A V G C +GD F VK GD + Y + +N Sbjct: 325 HPVIDDPDAPRLVADVVGPVCESGDYFARARDIPAVKAGDLVYLSSAGAYGAVQSGTYNS 384 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + ++ Sbjct: 385 RPLIAEVLVKGDAFHAIRPRQTIDEMIA 412 >gi|327402116|ref|YP_004342954.1| diaminopimelate decarboxylase [Fluviicola taffensis DSM 16823] gi|327317624|gb|AEA42116.1| diaminopimelate decarboxylase [Fluviicola taffensis DSM 16823] Length = 413 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 25/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D+ K+++ + + VKL A+K + + TL G + S+ E Sbjct: 14 GTPVYVYDEAKIISQYNRLKNAFGSQEVKLHYAMKALSNINVLKTLKNQGAGLDAVSIEE 73 Query: 63 VMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V LG F Y EI+ ++ I + +S L F + + Sbjct: 74 VHLGLRAGFEASEIMYTPNGVAFSEIEEAVALGVIINIDNLSVLEHFGMV-FGSLVPVCI 132 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSFLC 174 R+NP + S+ G ++ GL H + Sbjct: 133 RLNPHIMAGGHANISVGHIDSKFGISIHQLRHIQRIVDHYKLHIVGLHMHTGSDIVDADV 192 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--------KEFSEKYS 226 F + E ++E++ G G K+ + + K F ++Y Sbjct: 193 FLQGADLL-YEAATHFPELEFMDFGSGFKVAYKEGDFVTPIEEIGLKIGESFKNFCKEYG 251 Query: 227 VQI--YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLL--YQESATI 281 ++ + EPG+ +V+ + L +V + + + V+S + Y I Sbjct: 252 RELELWFEPGKFLVSESGVLLVSVNVVKQTTSTVFLGVNSGQNHLIRPMFYNAYHRIENI 311 Query: 282 YPNTG-PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 G V G C D FG K+GD ++ + Y + N +N P Sbjct: 312 SNPKGHKKLYSVVGYICET-DTFGYDRPISEAKVGDSLAIYNTGAYGFSMSNQYNSRLRP 370 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 S D N Sbjct: 371 AEVYVRDGNAFLIRERESLEDIIRN 395 >gi|329890871|ref|ZP_08269214.1| diaminopimelate decarboxylase [Brevundimonas diminuta ATCC 11568] gi|328846172|gb|EGF95736.1| diaminopimelate decarboxylase [Brevundimonas diminuta ATCC 11568] Length = 424 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 114/393 (29%), Gaps = 29/393 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG-----VKLLLALKCFAAWGMFDTLNQYMDGTT 56 + TP Y+ L + + A+K + + TL + G Sbjct: 25 VGTPTYVYSSATLRRHYGLLREACDAHKDALGEALIAFAVKANSNLSVLATLAKLGCGAD 84 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK 113 + S E+ GE ++ K A I + ++L++ A Sbjct: 85 TVSEGEIRRALAAGVPGERIIFSGVGKTDAELAFAIDVGVRQINVESSAELDRLIAVAAA 144 Query: 114 LHKKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVN--GLMFH 164 +R+NP + + G ++ S +V GL H Sbjct: 145 KGAAPATAIRVNPKIGAGGHAKITTGGAGDKFGVPVEEAMALYARASASPHVTPVGLACH 204 Query: 165 NNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDY----PVKDFCQR 217 + A + + + I + LGGG+ D+ Sbjct: 205 IGSQITDLAPLEAAFRVLRQMTEDLRAQGHSITRLDLGGGLGVPYYGETATPSPADYVAM 264 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLY 275 + +V+ EPG + N L + V+ ++E + +++D+++ + L Sbjct: 265 AARVLDGLNVEAAFEPGRLMAANAGVLLSRVIQVNERTDGRRFLVLDAAMNDLMRPALYD 324 Query: 276 QES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 V G C GD F P+K GD + F Y Sbjct: 325 AFHDLKPVRPVEGAALPYDVVGPVCETGDTFARDRDLPPLKAGDLVVFMSAGAYGAVMSG 384 Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 +N + + + + +Y + Sbjct: 385 EYNTRPLAAEVLVDGERYAVIRPRPTYEQMFAR 417 >gi|86747955|ref|YP_484451.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris HaA2] gi|86570983|gb|ABD05540.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris HaA2] Length = 421 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 58/389 (14%), Positives = 109/389 (28%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHYRVFSEAFAGTDALVCYAMKANSNQSVLRTLARLGAGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ K D + + +L A + + Sbjct: 85 ELQRALAAGIPASKIVFSGVGKTEAELRAALAHDIKCLNVESEPELELLSRLAVETGRTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 +R+NP V + ++ G E + ++G+ H + Sbjct: 145 RISIRVNPDVDSGTHAKISTGKSENKFGIPLVHAREVYARAAKLPGILISGVDVHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 A + + + I + GGG+ + + Q +K Sbjct: 205 IDLAPMEAAFRLVAEFVHQLRGDGHTISHVDFGGGLGIPYYEDRDAPPEPFAYAQMVKRV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + EPG IV N L V+ + + K VI+D+++ + L Sbjct: 265 THNLGCALLFEPGRMIVGNAGILVARVIYVKHGDGKTFVIIDAAMNDLIRPTLYEAYHEI 324 Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P TA V G C GD +K GD I+ Y + +N Sbjct: 325 LPVAAPAPGAKLITADVVGPVCETGDYLALDRQLPELKSGDLIAIMTAGAYGAVQACTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D Sbjct: 385 TRALVPEVLVKDDQYAVVRPRIEVEQLIA 413 >gi|320106738|ref|YP_004182328.1| diaminopimelate decarboxylase [Terriglobus saanensis SP1PR4] gi|319925259|gb|ADV82334.1| diaminopimelate decarboxylase [Terriglobus saanensis SP1PR4] Length = 437 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 69/391 (17%), Positives = 125/391 (31%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ +++ + + A+K +A G+ L G S E Sbjct: 42 GTPLYVYSAAQMVERAGMFAREFADVQHTVCYAVKANSALGVLKLLAAQGCGFDIVSGGE 101 Query: 63 VMLG-------HEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 + + G V + E A+ + +L ++A KL Sbjct: 102 LERVIRAAGDKRAEVCGRVVFSGVGKQPAEIDLALREGILLFNVESEGELELVAERAAKL 161 Query: 115 HKKIG--LRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHN 165 K LR+NP V + G + + + G+ H Sbjct: 162 KIKARIALRVNPDVFAETHPYISTGLREHKFGIDIRLARKVYKRAAQLKWLEPAGVSVHI 221 Query: 166 NCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD------FCQ 216 + +S F+ + + + K+ I + GGG+ + + + Sbjct: 222 GSQIRSVEPFAAALSRVVALIKQLRADGHDIRYADAGGGLGIDYGAGNFEPAKQVAKYAK 281 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLY 275 LK + + LEPG IV L + VL + +N K VI D+++ + L Sbjct: 282 ALKGALGTMDLHLLLEPGRFIVAQAGALVSQVLFVKKNGTKTFVIADAAMNDLIRPALYQ 341 Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + + V G C +GD F P+K GD I+ D Y ++ + Sbjct: 342 AHHEIVPLKQTSRKLRKVDVVGPVCESGDFFARDREMAPLKRGDGIALLDAGAYGLSLSS 401 Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 +N P + R + D + Sbjct: 402 NYNTRVRPAEVLIERGKARLIRRRETVEDLF 432 >gi|83313590|ref|YP_423854.1| diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1] gi|82948431|dbj|BAE53295.1| Diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1] Length = 424 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 110/392 (28%), Gaps = 26/392 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP+Y L + K AG + A K + T Q G S Sbjct: 25 VGTPFYCYSTATLQRHYTVFAEALKAAGLDATICFAAKANPNMAVIRTFAQLGAGADVVS 84 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKL 114 E+ ++ K I + +L + A + Sbjct: 85 EGELRQALAAGVPAARIVFSGVGKTRHELEFAVAKGIFQINVESEPELEMLSEIAAARGQ 144 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-----KNVNGLMFHNNCEN 169 I +R+NP V + ++ G + E V + + + Sbjct: 145 VMPIAIRVNPDVDAGTHAKITTGKKENKFGIEWTRAREVYARAKALPGVEPVAIACHIGS 204 Query: 170 K-----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEF 221 + F ++++ I + LGGG+ D + +K Sbjct: 205 QLTELTPFREAFLRVRDLVAMLRADGIDIRRLDLGGGLGVPYDDETPPEPAAYAEVIKAT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280 + EPG +V N L + ++ + E IVD+++ L + Sbjct: 265 LGDLGCRFVFEPGRLLVGNAGILVSRIIRVKEGSTRTFLIVDAAMNDLARPSLYDAYHSI 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 V G C GD F + P++ D ++F Y + +N Sbjct: 325 FPVAEPKAGAALAEVDVVGPVCETGDTFAKQRRLPPMRTDDLLAFGTAGAYGAAMSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + SY D + S Sbjct: 385 TRPLIPEVLVKGGDYAVIRVRPSYEDMRSLES 416 >gi|89099060|ref|ZP_01171939.1| diaminopimelate decarboxylase [Bacillus sp. NRRL B-14911] gi|89086190|gb|EAR65312.1| diaminopimelate decarboxylase [Bacillus sp. NRRL B-14911] Length = 439 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 62/399 (15%), Positives = 122/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + GVK + A K F++ M + S Sbjct: 30 GTPVYVYDVALIRERARGFRQTFEELGVKSQVAYASKAFSSIAMIQLAEEEGLSLDVVSG 89 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K E + I+ + +L K + + K Sbjct: 90 GELYTALAAEFPVERIHFHGNNKSREELEMALHYGVGCIVVDNFDELELLKSVCENKNTK 149 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 I LR+ P + + S+ G K I + G+ H Sbjct: 150 TKILLRVTPGIEAHTHDYILTGQEDSKFGFDLQNGQAEAALKQAISTPWLETLGIHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKDFC------- 215 + F + I ++ + ++ + ++LGGG D Sbjct: 210 SQIFETTGFILAAEKIFEKLSIWKKELAYEPAVLNLGGGFGIRYTDEDAPIAASKYVEEI 269 Query: 216 ----QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 ++L + +I++EPG ++V + T + VD + ++ Sbjct: 270 ISEVKKLAGSYQMEMPEIWIEPGRSLVGDAGTTLYKTGSRKDVPNVRHYLAVDGGMSDNI 329 Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N T + G+ C +GD+ + D ++ Sbjct: 330 RPALYQAKYEAVLANRPLEKAEETVSIAGKCCESGDMLIWDLPLPKAEREDLLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + ++ S+ D Sbjct: 390 YGYSMANNYNRIPRPPVVFVENGEARLVVKRESFEDLIR 428 >gi|74316244|ref|YP_313984.1| diaminopimelate decarboxylase [Thiobacillus denitrificans ATCC 25259] gi|74055739|gb|AAZ96179.1| diaminopimelate decarboxylase [Thiobacillus denitrificans ATCC 25259] Length = 414 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 113/380 (29%), Gaps = 23/380 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + A+K ++ + + + G S E Sbjct: 26 GTPLYVYSRAALEAAYRAYEEAFAATPHLICYAVKANSSLALLNLFARMGAGFDIVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K D A+ + + S+L++ A +L K Sbjct: 86 LARVLSAQGDPRKVVFSGVGKRVDEMRAALEAGILCFNVESTSELHRLNRVAGELGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + R+NP V ++ G + V G+ H + Sbjct: 146 VSFRVNPDVDPKTHPYISTGLKENKFGVPIAEAPALYRTAAALPHIRVTGIDCHIGSQLL 205 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + + +E I LGGG+ + + + + + L E Sbjct: 206 DLSPLADAADRVFALVDALAAEGIALEHIDLGGGVGISYRGETAPDLAGYGRVLAERFAG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + +EPG ++V N L V + KN IVD+++ + L + Sbjct: 266 RRETLIVEPGRSLVGNAGLLLARVEYLKLGADKNFAIVDAAMNDLMRPALYEAYHEIVEV 325 Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P V G C GD G + GD ++ Y ++ + +N Sbjct: 326 IARPLPKRRYDVVGPICETGDFLGSARELS-LDEGDLVALLSSGAYGMSMSSNYNSRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYN 360 + + + Sbjct: 385 AEILVDKKEIHLIRERETQE 404 >gi|254560913|ref|YP_003068008.1| diaminopimelate decarboxylase [Methylobacterium extorquens DM4] gi|254268191|emb|CAX24106.1| diaminopimelate decarboxylase [Methylobacterium extorquens DM4] Length = 422 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 112/389 (28%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL G S Sbjct: 25 VGTPFYCYSTATLERHYRVFAEAFAGDDALVCFAMKANSNQAVLATLAHQGAGMDIVSEG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ GE ++ ++ A+ +N + +L + A + Sbjct: 85 ELRRALAAGVPGERIVFSGVGKTREEMAAALDANILCFNVESEPELAALSEVAVARGRKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + +R+NP V + ++ G + G+ H + Sbjct: 145 PVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARAVYAGAARLPGLEIVGVDAHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + + + ++ + GGG+ L+ Sbjct: 205 TDLTPFDNAARLLCELARDLLADGHRLHHVDFGGGLGIPYRDDNAPPPDPAALAAILRPH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + ++ E G I N L T V+ + + K VIVD ++ + L A Sbjct: 265 FKPLGLRPVFEIGRMIAGNAGILVTRVIYVKPTDEKTFVIVDGAMNDLIRPTLYEAFHAL 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 TA V G C +GD V GD I+ Y + +N Sbjct: 325 RPVRKPAPNTPRLTADVVGPVCESGDYLALGREMPMVAPGDLIAVMSAGAYGAVQACTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + SY+D Sbjct: 385 SRRLVPEVLVTGDRSAVVRPRPSYDDLIR 413 >gi|126179859|ref|YP_001047824.1| diaminopimelate decarboxylase [Methanoculleus marisnigri JR1] gi|125862653|gb|ABN57842.1| diaminopimelate decarboxylase [Methanoculleus marisnigri JR1] Length = 430 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 122/391 (31%), Gaps = 31/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ ++ N +++L A K +F TL G S Sbjct: 29 GTPLYVTDEMRIRGNFQRLSGALTAHYPKIRVLYAAKANGNLAIFKTLASQGAGADVFSA 88 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 EV L + ++ + + ++ +L + A Sbjct: 89 GEVALALAAGMLPSSLLFNGSSKTPADLALAVEKGIRVSVDSPDELRQLDRAAGAAGTTV 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169 +I R+NP++ S+ G +++ + + G+ H + Sbjct: 149 EIAFRVNPAIEVPTHPKIATGLATSKFGIPAGQILDAYREALALEHVKPVGIHCHIGSQI 208 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F+ ++ + + +I +GGG+ +++ + + Sbjct: 209 LDVEPFAHEVEVLIDVARDLLDIGVNLSFIDIGGGLGIPYHRETDRAPTPEEYAEAVMPV 268 Query: 222 SEK------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275 + ++++EPG ++ ++T L T V + K VD+ V + Sbjct: 269 FLRGIKELGIEPELWVEPGRWLIGDSTVLLTRVNSVKTAHKTFANVDAGFNLLVRPTMYD 328 Query: 276 QESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + N V G C GDI + ++ GD I+ D Y Sbjct: 329 SYHEVVAANRADAPAVREYSVTGPICETGDILAKDRMLPELEAGDLIAVLDAGAYGFAMS 388 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + +N + + R + +D Sbjct: 389 SQYNSRPRCAEVLLAGEKAALMRRAETIDDL 419 >gi|239832987|ref|ZP_04681316.1| diaminopimelate decarboxylase [Ochrobactrum intermedium LMG 3301] gi|239825254|gb|EEQ96822.1| diaminopimelate decarboxylase [Ochrobactrum intermedium LMG 3301] Length = 421 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 122/389 (31%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + ALK + + TL + G + S Sbjct: 25 VGTPFYVYSRATVERHFRVFSEAFAGMETLVTYALKANSNQAVLKTLAKLGAGADTVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNV-AYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E+ ++ E+D A+ + + +L +A + K Sbjct: 85 EIRRALAAGIPANKIVFSGVGKTPHEMDFALEAGIYCFNVESEPELEILSARAVRAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G E+ + +V G+ H + Sbjct: 145 SVSLRINPDVDAKTHAKISTGKSENKFGIPRVKAREAYARAASLPGLDVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + + E I + +GGG+ + + + + Sbjct: 205 IDLEPFDDAFALMAQLVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPLPVAYAEIVARH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + ++ EPG IV N L T V+ + E + KN VIVD+++ + L Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + A G C GD G GD I+ Y + +N Sbjct: 325 KPVTLPKDDAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAVCTTGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D +Y + Sbjct: 385 SRLLIPEVLVDGDRYHVVRPRRTYEELLA 413 >gi|329118402|ref|ZP_08247108.1| diaminopimelate decarboxylase [Neisseria bacilliformis ATCC BAA-1200] gi|327465448|gb|EGF11727.1| diaminopimelate decarboxylase [Neisseria bacilliformis ATCC BAA-1200] Length = 406 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 64/385 (16%), Positives = 119/385 (30%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + A+K + + G S E Sbjct: 18 GTPLYVYSQSALDEAFAAYQTAFAALNPLICYAVKANGNLSLIRRFAELGSGFDIVSGGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G +T V E++ + ++ +L + A +L+ Sbjct: 78 LARVLAAGGSAAKTIFSGVGKSAAEMEYALKAGIKCFNVESLPELERLNGIAGRLNTRAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LRINP V ++ G +D + + G+ H + Sbjct: 138 VSLRINPDVDAQTHPYISTGLKANKFGIAMRDAEAAYARAAELPHLRIVGIDCHIGSQLI 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 + I +++ I LGGG+ +D D + +++ Sbjct: 198 RLDPLIEACERILALADRLAAQGIELQHIDLGGGVGIVYRDEDTPDLSAYAAAVQKLIGS 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES---AT 280 + + LEPG ++V N L T V + KN VIVD+++ + L Sbjct: 258 RPLGLILEPGRSLVGNAGDLLTRVEYVKRNEDKNFVIVDAAMNDLMRPALYQAYHRIEPA 317 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P P+TA + G C GD + + GD + Y + +N Sbjct: 318 EPPAAAPFTADIVGPVCETGDFLAKDRRIA-AQAGDLLVVRGAGAYAASMAGNYNARRRA 376 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + R + + N Sbjct: 377 AEVLVSGSQARLVRRRETVEEMLAN 401 >gi|323135718|ref|ZP_08070801.1| diaminopimelate decarboxylase [Methylocystis sp. ATCC 49242] gi|322398809|gb|EFY01328.1| diaminopimelate decarboxylase [Methylocystis sp. ATCC 49242] Length = 421 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 65/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y + + + A+K + + L + G S Sbjct: 25 VGTPFYCYSAATIRRHFRVFAQAFDGLDAMVCYAMKANSNQAVLRLLAKEGAGMDVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKKI 118 E+ G Y+ K E A + D FN + +L A ++ K Sbjct: 85 ELARALAAGAPGGRITYSGVGKTEEEIAAALDADIFCFNVESEPELEAISRVATRMGKVA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 LR+NP V + ++ G E + ++ G H + Sbjct: 145 RVSLRVNPDVDARTHKKISTGKAENKFGVPLSHAREVYARAAKFRGVDITGADMHIGSQL 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKD------YPVKDFCQRLKE 220 F + + + I + LGGG+ + Y + + +++ Sbjct: 205 TDLEPFDEAFSLLAELVVDLRADGHHISHVDLGGGLGIPYHEGDDPQSYHPERYAAIVRK 264 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 + ++ LEPG IV N L T V+ + K VIVD+ + V L Sbjct: 265 HFAGLNCKLVLEPGRLIVGNAGVLVTRVIYVKHGEAKTFVIVDAGMNDLVRPTLYDAHHD 324 Query: 280 TIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I TA V G C GD + G+ ++ Y + +N Sbjct: 325 IIPVRAAADREEITADVVGPVCETGDYLALDRKMPEARPGELLAVLTAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + S + Sbjct: 385 TRPLIPEVLVDGERFAVIRPRPSVAELIA 413 >gi|332139612|ref|YP_004425350.1| putative diaminopimelate decarboxylase [Alteromonas macleodii str. 'Deep ecotype'] gi|327549634|gb|AEA96352.1| putative diaminopimelate decarboxylase [Alteromonas macleodii str. 'Deep ecotype'] Length = 416 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 69/384 (17%), Positives = 123/384 (32%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ L + G S E Sbjct: 26 GTPVYIYSRATLERHWHAFNDAIGEHPHLVCYAVKANSNIGVLSVLAKLGSGFDIVSAGE 85 Query: 63 -VMLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + ++ D A+ + +L++ + A + + Sbjct: 86 LARVIEAGGDASKVVFSGVGKKHDEIRYALEQGIMCFNVESEPELHRINEVAGEVGVKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G + + + NV G+ H + Sbjct: 146 ISLRINPDVDAKTHPYISTGLKANKFGIARERALATYELAASLPNLNVVGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F L+ + E IE + +GGG+ T +P ++ Sbjct: 206 EIGPFVDALERLLVLIDELAERNIIIEHLDVGGGLGVTYNDEEPPHPKAYAQAMAEKMVG 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + ++++ LEPG AI N L T V I E K+ IVD+++ + L I Sbjct: 266 RENLKLILEPGRAIAANAGILVTEVEFIKEGEEKSFAIVDAAMNDLLRPALYSAWQKIIP 325 Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 +T V G C GD G+ ++ D ++ Y + +N Sbjct: 326 VKEESTAKLHTYDVVGPVCETGDFIGKDRELA-IEPTDLLAVRSAGAYGFVMASNYNSRC 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 P + + D I D Sbjct: 385 RPAEIMVDGDKAIVVREREKQKDL 408 >gi|262404862|ref|ZP_06081416.1| diaminopimelate decarboxylase [Vibrio sp. RC586] gi|262348946|gb|EEY98085.1| diaminopimelate decarboxylase [Vibrio sp. RC586] Length = 417 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 110/380 (28%), Gaps = 24/380 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S+ E Sbjct: 27 GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ + +L++ A +L Sbjct: 87 LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELHRLNKVAAELGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G E +V+G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAEVYRLAHSLQNLDVHGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F + I + +GGG+ +D + K ++ Sbjct: 207 ALAPFIDATDRLLALIDSLKTEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 266 Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279 EPG AI N L T V + I+D+++ + L Sbjct: 267 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C D G+ ++ GD ++ Y + +N Sbjct: 327 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LEEGDLLAVRSSGAYGFTMSSNYNSRPR 385 Query: 340 PTIAVKNVDGTIKAIREFSY 359 + + + + Sbjct: 386 VAEVMVDGIKAHLVRQRETL 405 >gi|254788013|ref|YP_003075442.1| diaminopimelate decarboxylase [Teredinibacter turnerae T7901] gi|237687153|gb|ACR14417.1| diaminopimelate decarboxylase [Teredinibacter turnerae T7901] Length = 421 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 54/386 (13%), Positives = 110/386 (28%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A+K ++ + L Q G S E Sbjct: 26 DTPCYVYSRASIEQSYQAYASALGAHPGMICYAVKANSSLAVLQVLAQQGAGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + ++ + A+ + ++L AQ + Sbjct: 86 LQRVLAAGGSADRVIFSGVGKKAEEMRFALQQQIACFNVESAAELETLAQVAQAMGTTAR 145 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170 LR+NP V + ++ G + + +V G+ H + Sbjct: 146 VSLRVNPDVDANTHPYISTGLKENKFGVDIQTALDVYRRAASLDGIDVVGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F L + + I + LGGG+ T + + + K Sbjct: 206 QLAPFMDALDRVLALMDQLAEEGITIRHLDLGGGLGVTYNNEQPPSPADYVGQVIAKLGD 265 Query: 228 QIY---LEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES----- 278 + EPG +IV N L T VL + I+D+++ ++ L Sbjct: 266 RAVALMFEPGRSIVANAGVLLTRVLYLKPTEHKNFAIIDAAMNDNIRPSLYQAWQRVLPV 325 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + + G C GD + + G ++ Y + +N Sbjct: 326 IAPEESEPTQQWDLVGPVCETGDWLAKDRALA-LHEGSVLALMSSGAYGFTMSSNYNSRT 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D ++ D Sbjct: 385 RAAEIMVDGDKHHLIRARETFADLVR 410 >gi|260767552|ref|ZP_05876488.1| diaminopimelate decarboxylase [Vibrio furnissii CIP 102972] gi|260617452|gb|EEX42635.1| diaminopimelate decarboxylase [Vibrio furnissii CIP 102972] Length = 417 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 112/378 (29%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S E Sbjct: 27 GTPLYVYSRATLERHWHAFDKSVGDHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSAGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + ++ K A+ + S+L + A + Sbjct: 87 LERVVAAGGDPAKVVFSGVGKTAAEMKRALALKIKCFNVESESELERLNQVAGEMGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G + +++G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPDVYRLAQRLDHISIHGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + F + I+ + +GGG+ P + L + Sbjct: 207 AIEPFIDATDRLLALIDNLKAEGIHIKHLDVGGGLGVVYRDELPPQPSEYAKALLSRLAN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HQELELIFEPGRAIAANAGVLLTRVEYLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C GD G+ ++ GD ++ Y + +N Sbjct: 327 VSPREGAALTYDLVGPVCETGDFLGKDRSLV-LQQGDLLAVRSAGAYGFAMSSNYNTRTR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + T + Sbjct: 386 AAEVIVDGGTTHVVRQRE 403 >gi|256059955|ref|ZP_05450139.1| diaminopimelate decarboxylase [Brucella neotomae 5K33] gi|261323926|ref|ZP_05963123.1| diaminopimelate decarboxylase [Brucella neotomae 5K33] gi|261299906|gb|EEY03403.1| diaminopimelate decarboxylase [Brucella neotomae 5K33] Length = 421 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 66/389 (16%), Positives = 120/389 (30%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + + ALK + + L + G + S Sbjct: 25 VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ A K A+ + + +L + A Sbjct: 85 EIRRALAAGIPANRIVFSGAGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G + + NV G+ H + Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + KE I + +GGG+ P + Q + + Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + S++ EPG IV N L T V+ + E + KN VIVD+++ + L Sbjct: 265 IKPLSLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A G C GD G GD I+ Y + +N Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y + Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413 >gi|118443019|ref|YP_877435.1| diaminopimelate decarboxylase [Clostridium novyi NT] gi|118133475|gb|ABK60519.1| diaminopimelate decarboxylase [Clostridium novyi NT] Length = 432 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 68/399 (17%), Positives = 120/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y++D++ + N K K+ A K F M +N+ S Sbjct: 29 KTPLYVMDEELIRENCRRYRENFKGNNEVNKVAYAGKAFLTIAMCQLINEEGMCLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ +F E ++ K E + + + ++ A Sbjct: 89 GELYTAYKSEFPMEKIYFHGNNKTLEEIDMGVRLGVGRFVADNFYEIENINKIAKKYDKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 +KI LRI P + + S+ G + G H Sbjct: 149 QKILLRITPGIEAHTHDYIKTGQIDSKFGFTLLQNQTLKAVEMANKFSNIEFVGFHCHIG 208 Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK--- 219 + + ML I++ I+ + LGGG + Sbjct: 209 SQIFEIEPYRDEVRIMLALIKEVKEKLGCTIKELDLGGGFGIYYGKGDSPKKIEDFCSAI 268 Query: 220 --------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + +EPG +IV N T TV I E + V + ++ Sbjct: 269 LEEAVKVSKELDIELPSLVIEPGRSIVGNAGTTLYTVGSIKEIPEIRKYVSVDGGMTDNI 328 Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N + G+ C +GDI E + GD ++ Sbjct: 329 RPALYRASYECLVANNVKAKSKEKVTISGKCCESGDILLENVKVSHAESGDILAVLTTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I P + N + + SY D + Sbjct: 389 YGYSMSSNYNKIPRPAVVFVNRGQSKLICKRQSYEDLVS 427 >gi|94970467|ref|YP_592515.1| diaminopimelate decarboxylase [Candidatus Koribacter versatilis Ellin345] gi|94552517|gb|ABF42441.1| diaminopimelate decarboxylase [Candidatus Koribacter versatilis Ellin345] Length = 427 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 69/390 (17%), Positives = 116/390 (29%), Gaps = 29/390 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + D + ++K + + L + G S E Sbjct: 34 GTPLYTYSATTIRERFDIFNRAFGKVPHTICYSVKANSNLTILKMLVKLGSGFDVVSGGE 93 Query: 63 VMLGH---EKFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + +K + V A+ S+ + S+L +A KL KK Sbjct: 94 LERVLVVDKKAAKKVVFSGVGKTAPEMDLAIKSDILLFNIESESELELLASRASKLRKKP 153 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 + R+NP V + G +E G+ H + Sbjct: 154 RIAFRVNPDVPAETHPYISTGLREHKFGVPITDAALLYAQAASTEWLEPAGVSVHIGSQI 213 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFC---------QR 217 F+A ++ + + I I GGG+ +D Sbjct: 214 TDVAPFNATMERVADLVRGLRAQGHNIRLIDGGGGLGIAYRDGDTSLKAFEASAKNYSAA 273 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQ 276 L + + LEPG AI+ L T V+ K VIVD+ + + L Sbjct: 274 LLPPLNSLGIHLLLEPGRAIIGPAGALLTRVVYSKKNGRKTFVIVDAGMNDLIRPALYGA 333 Query: 277 ESATIY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + TG T V G C GD F ++ GD ++ D Y +++ + Sbjct: 334 YHEIVAAEPRGTGAETVDVVGPVCETGDFFARDRELTHLEEGDLVAILDAGAYGMSQTSN 393 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 +N P + R + D Sbjct: 394 YNTRPRPAEVLVEGSRAKVVRRRETIKDLL 423 >gi|322435524|ref|YP_004217736.1| diaminopimelate decarboxylase [Acidobacterium sp. MP5ACTX9] gi|321163251|gb|ADW68956.1| diaminopimelate decarboxylase [Acidobacterium sp. MP5ACTX9] Length = 433 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 69/388 (17%), Positives = 126/388 (32%), Gaps = 26/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ +Q +L L + + A+K +A + L Q G S E Sbjct: 42 GTPLYVYSQQHILGRLALFQQAFASRPHTICYAVKANSALAILKLLAQNGAGFDIVSGGE 101 Query: 63 VMLGHEKFGG--ETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + + K A+ + + S+L D+A+ L Sbjct: 102 LARVVKAAKPAVKKTVFAGVGKQIPEIDAALKAGILLFNVESESELALLADRAELLKIPA 161 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 LR+NP V + G + +S+ G+ H + Sbjct: 162 RFSLRVNPDVFAETHPYISTGLSAHKFGIDINAARAIYRKAAKSKYLIPTGVSVHIGSQI 221 Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSE 223 ++ F A L + ++ + I GGG+ P K+ E Sbjct: 222 RAVDPFGAALDRVTSLIQQLKKDGITLTHIDAGGGLGIEYTDAPFDPAAAVAAYAKQVLE 281 Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQES- 278 + + LEPG +V L TTV+++ +N K VI D+ + + L Sbjct: 282 ATDHLDLHLLLEPGRFLVAQAGALLTTVVNVKKNGNKTFVITDAGMNDLIRPALYQAHHQ 341 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + G C +GD F K GD ++ D Y ++ + +N Sbjct: 342 ILPVRQTSAKSSPVDIVGPVCESGDFFARDRDLPATKPGDLLAILDAGAYGMSLTSNYNT 401 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 P + + + R + D + Sbjct: 402 RTRPPEVLVDGAESRLIRRRETIKDLFA 429 >gi|188580974|ref|YP_001924419.1| diaminopimelate decarboxylase [Methylobacterium populi BJ001] gi|179344472|gb|ACB79884.1| diaminopimelate decarboxylase [Methylobacterium populi BJ001] Length = 422 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 59/389 (15%), Positives = 112/389 (28%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHYRVFAQAFAGDDALVCFAMKANSNQAVLATLARQGAGMDIVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ GE ++ ++ A+ +N + +L + A + Sbjct: 85 ELRRALAAGVPGERIVFSGVGKTREEMAAALDANILCFNVESEPELAALSEVAASRGRKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + +R+NP V + ++ G + G+ H + Sbjct: 145 PVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARAVYAGAARLPGLEIVGVDAHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + + + ++ + GGG+ L+ Sbjct: 205 TDLTPFDNAARLLCELARDLLADGHRLHHVDFGGGLGIPYRDDNAPPPDPAALAAILRPH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + ++ E G I N L T V+ + + K VIVD ++ + L A Sbjct: 265 FKPLGLRPVFEIGRMIAGNAGILVTRVIYVKPTDEKTFVIVDGAMNDLIRPTLYEAFHAL 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 TA V G C +GD GD I+ Y + +N Sbjct: 325 RPLREPAPDTPRLTADVVGPVCESGDYLALGREMPMAAPGDLIAVMSAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D SY+D Sbjct: 385 SRRLVPEVLVSGDRAAVVRPRPSYDDLIR 413 >gi|160872806|ref|ZP_02062938.1| diaminopimelate decarboxylase [Rickettsiella grylli] gi|159121605|gb|EDP46943.1| diaminopimelate decarboxylase [Rickettsiella grylli] Length = 417 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 65/388 (16%), Positives = 130/388 (33%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ K +L G ++ A+K + + L + G S E Sbjct: 25 GSPCYIYSKSRLYEQWCAFKS-FIQNGHQICYAVKANSNLAILALLAHWGAGFDIVSGGE 83 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 E ++ K CE A+ ++ + +L + + A+ Sbjct: 84 FDRVLRAGGHAENTVFSGVGKTCEEIKSALFAHIGCFNVESSGELFRIEALAKNIGAVAP 143 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP++ ++ G KD + + G+ H + Sbjct: 144 IALRVNPNIDPKTHPYITTGLNDTKFGLNEKDALTLYRYAAQSNHLTIRGISCHLGSQIT 203 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS----- 222 + F L+++ K ++ I+LGGG+ T + V + ++ Sbjct: 204 TIDPFLQALEHLLKLTEALKKEHILLKTINLGGGLGVTYQTENVPSVQEYSQKILALLKK 263 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 ++ + LEPG A++ L T V + + K+ IVD+ + + L E A + Sbjct: 264 RNSTLTLILEPGRALIAQAGILVTKVEYLKSNHRKHFAIVDAGMNDLIRPALYQAEHAIL 323 Query: 282 ----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G C + D FG+ ++ GD ++ D Y + + +N Sbjct: 324 PIVQRSLPRKKKYDIVGPICESSDFFGKNRELV-LRAGDYLAIMDSGAYGFSMSSNYNSR 382 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + D + N Sbjct: 383 PRAAELMVDTDRVFLIRSRETLAQLLAN 410 >gi|34556768|ref|NP_906583.1| diaminopimelate decarboxylase dap decarboxylase [Wolinella succinogenes DSM 1740] gi|34482482|emb|CAE09483.1| DIAMINOPIMELATE DECARBOXYLASE DAP DECARBOXYLASE [Wolinella succinogenes] Length = 401 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 70/384 (18%), Positives = 122/384 (31%), Gaps = 21/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D ++ + + A+K + + L + G S+ E Sbjct: 11 GTPLYVYDFDQIKSQFLQLKEAFAGRKSLIAYAIKANSNLSVIQHLGKLESGADCVSIGE 70 Query: 63 VMLGH-EKFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119 V ++ +D EI LS I + ++L + + A+ L K Sbjct: 71 VKRALKAGIPPYKIIFSGVGKRDEEILEALSLEILMINVESEAELLRVESLAKSLGKVAR 130 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + R+NP + ++ G + SE + G+ FH + Sbjct: 131 ISIRVNPDIDPKTHPYISTGLSENKFGVDIESAKRLYILCAKSESLHPVGIHFHIGSQLT 190 Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 K + + +I++ +GGG+ KD + D+ Q + Sbjct: 191 ELEPLLESAKKVADLTRSLLALKIEIKFFDVGGGLGIRYKDETPINLYDYAQGILAALHG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 V I EPG IV N T VL K VIVD ++ + L P Sbjct: 251 LDVTIVCEPGRFIVGNAGCFLTRVLYEKQNEKKRFVIVDGAMNDLLRPSLYKAYHEAFAP 310 Query: 284 NTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 G A + G C +GD + P++ GD I + Y + + +N Sbjct: 311 KGGESFSEADIVGPVCESGDWLAKGVMLPPLEHGDLIVIKSAGAYGFSMSSQYNSRARAA 370 Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365 + + N Sbjct: 371 EVALEGGESRLIRAREEIESLWQN 394 >gi|330999054|ref|ZP_08322778.1| diaminopimelate decarboxylase [Parasutterella excrementihominis YIT 11859] gi|329575641|gb|EGG57172.1| diaminopimelate decarboxylase [Parasutterella excrementihominis YIT 11859] Length = 437 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 55/388 (14%), Positives = 116/388 (29%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ KQ ++N + + + A+K + + L + G S E Sbjct: 33 GTPLYVYSKQAIVNAFQSYQKPLEPYKHLMCFAVKANSNLSIIRLLGKLGAGFDIVSEGE 92 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + D + ++L++ AQK KK Sbjct: 93 LRRIQAAGCDTSKVIFSGVAKTYHEIEAALDADIKCFNIESPAELDRVIAVAQKKGKKAR 152 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 R+NP V ++ G + S V G+ H + Sbjct: 153 VSFRVNPDVDAKTHPYISTGLKKNKFGIAYDQAVELYLKASRSPELEVVGIDCHIGSQIT 212 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 F + + ++ I GGG+ + P + + Sbjct: 213 DTAPFVDACEKLCTLLDKLRLNGIDLQHIDFGGGLGIQYSNEAVPSPTVLVAALRRVLVK 272 Query: 224 KYS--VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS-VEAHVPDYLLYQESAT 280 + ++ E G ++V N+ L TV + + + + + L Sbjct: 273 RGYGDKEMIFEAGRSLVGNSGALLMTVQYMKQGELKNFCIVDCGMNDMIRPTLYQAWMQI 332 Query: 281 IYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + V G C GD G+ V+ GD ++ Y ++ + +N Sbjct: 333 VPVTPKKEEKETYCYVVGPVCETGDWLGKDRLL-NVQEGDLMALLSAGAYGMSMASNYNS 391 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 +P + + + + + ++ Sbjct: 392 RCLPAEVLVDGNRAALIRKRQCAEELFS 419 >gi|227823226|ref|YP_002827198.1| diaminopimelate decarboxylase [Sinorhizobium fredii NGR234] gi|227342227|gb|ACP26445.1| diaminopimelate decarboxylase [Sinorhizobium fredii NGR234] Length = 422 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 61/389 (15%), Positives = 110/389 (28%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHYRVFAQAFADVDAMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ E ++ K + + + +L +A + Sbjct: 85 ELRRALAAGIPAERIMFSGVGKTPREMDLGLEAGIYCFNVESEPELEILNQRAVRAGKQA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + RINP V + ++ G + V G+ H + Sbjct: 145 HVSFRINPDVDARTHAKISTGKKENKFGISWERARAVYAHAATLPGIKVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F K + I+ + +GGG+ ++ + +K Sbjct: 205 TELQPFDDAFKLLRELVDTLRSDGHAIDHVDIGGGLGIPYREDNNPPPLPDAYADIVKNQ 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + +I EPG IV N L T V+ + + K VIVD ++ + L Sbjct: 265 LKGLDCKIVTEPGRLIVGNAGILVTEVIYVKDGGEKTFVIVDGAMNDLIRPTLYEAYHEI 324 Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A V G C GD K GD + Y + +N Sbjct: 325 RPVKISAANAPRIKADVVGPVCETGDYLALDREMAMPKPGDLFAIGSAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D Y+ + Sbjct: 385 SRLLVPEVLVKGDRFHVIRPRKDYDALID 413 >gi|293390767|ref|ZP_06635101.1| diaminopimelate decarboxylase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951301|gb|EFE01420.1| diaminopimelate decarboxylase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 416 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 114/384 (29%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L + N + A+K + + + + G S E Sbjct: 26 GTPLYVYSKAALERHWYAFENAFGNHPHLVCFAVKSNPNIAILNIMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K A + ++L + A Sbjct: 86 LERVLAAGGEAHKVVFSGVAKSRREIARALEVGIRCFNVESEAELLRINQVAGDIGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVEQAREVYKLATTLPNIEIVGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + Q++ + LGGG+ T +P + ++ S Sbjct: 206 ELQPFLDAADRLIMLMEQLKQDSIQLKHLDLGGGLGVTYTDETPPHPTEYAKALWEKLSA 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I +EPG AI N L T V + +N IVD+ + + L + Sbjct: 266 FNELEIIVEPGRAITANAGILVTKVEYLKSNESRNFAIVDAGMNDMIRPALYQAYMNILE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD ++ Y + + +N Sbjct: 326 IDRTLAREEKIYDVVGPICETSDFLGKQRKLA-IAEGDYLAQRSAGAYGASMSSNYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + D R + N+ Sbjct: 385 RTAEVMVDGDNAYLIRRREALNEL 408 >gi|222087349|ref|YP_002545886.1| diaminopimelate decarboxylase protein [Agrobacterium radiobacter K84] gi|221724797|gb|ACM27953.1| diaminopimelate decarboxylase protein [Agrobacterium radiobacter K84] Length = 423 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 119/388 (30%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + A+K + + TL + G S+ Sbjct: 25 VGTPFYVYSTATLERHYRVFSEAFSDVDAMVCYAMKANSNQAVLKTLGRLGAGVDVVSVG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E+ ++ K A+ + + +L +A + K Sbjct: 85 ELQRALAAGIPANRIMFSGVGKTAQEMDVALEAGIYCFNVESEPELEVLNQRAVRAGKIA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNV-----NGLMFHNNCEN 169 + RINP V + ++ G + + + N+ G+ H + Sbjct: 145 PVSFRINPDVDARTHAKISTGKKENKFGISWERARTVYARAANLPGIDATGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F K + + I + +GGG+ +D + +K+ Sbjct: 205 TELQPFEDAFKLLRELVETLRGDGHDIHHVDIGGGLGIPYRDDNTPPPLPDAYAHIVKDQ 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + +I EPG IV N L T V+ + + K+ VIVD+++ + L Sbjct: 265 LRGLNCKIVTEPGRLIVGNAGILVTEVIYVKDGGNKSFVIVDAAMNDLIRPTLYEAYHEI 324 Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A + G C GD K GD ++ Y + +N Sbjct: 325 RPVEITAANAPRIKADIVGPVCETGDYLALDREMAMPKPGDLLAVSSGGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + +Y + Sbjct: 385 SRLLVPEVLVKGSDFHVIRARRTYEELI 412 >gi|148381278|ref|YP_001255819.1| diaminopimelate decarboxilase [Clostridium botulinum A str. ATCC 3502] gi|153934190|ref|YP_001385655.1| diaminopimelate decarboxilase [Clostridium botulinum A str. ATCC 19397] gi|153936837|ref|YP_001389061.1| diaminopimelate decarboxilase [Clostridium botulinum A str. Hall] gi|148290762|emb|CAL84893.1| diaminopimelate decarboxylase [Clostridium botulinum A str. ATCC 3502] gi|152930234|gb|ABS35734.1| diaminopimelate decarboxilase [Clostridium botulinum A str. ATCC 19397] gi|152932751|gb|ABS38250.1| diaminopimelate decarboxilase [Clostridium botulinum A str. Hall] Length = 428 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 72/398 (18%), Positives = 130/398 (32%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP Y++D+ + +N + K+ A K F M + + + S E Sbjct: 29 KTPLYVMDETLIRDNCRRYVTSFDKEKNKVAYAGKAFLTKAMCNLIKEEGLSLDVVSGGE 88 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + F + ++ K E + N T + + +L+K + + + K Sbjct: 89 IFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTFVADNFQELDKINNICKNKNIKQR 148 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 LRI P + + S+ G D E E G H + Sbjct: 149 VILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKAVKKASELENIQFVGFHCHIGSQ 208 Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 ML+ I++ IE + LGGG K+ + + Sbjct: 209 IFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGGFGIYYKEGDEPKKIEEFCKIILD 268 Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + +EPG +IV N+ +V I E + + + ++ Sbjct: 269 KTKSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSIKEIPNIAKYIAVNGGMTDNIRP 328 Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L E + N V G+ C +GDI + V+ D ++ + Y Sbjct: 329 ALYKSEYECVVCNKALDNLLEEVKVVGKCCESGDILIDNVKLPIVETDDLLAILNTGAYG 388 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N +P++ N D T R SY + N Sbjct: 389 YSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQN 426 >gi|302879299|ref|YP_003847863.1| diaminopimelate decarboxylase [Gallionella capsiferriformans ES-2] gi|302582088|gb|ADL56099.1| diaminopimelate decarboxylase [Gallionella capsiferriformans ES-2] Length = 417 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 117/384 (30%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ + L + + A+K A + + + G S E Sbjct: 29 ETPCYVYSRAALTEGFREFSDALQGREHLICYAVKANANLAILNVFARLGAGFDIVSGGE 88 Query: 63 VMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K A+ + + ++L++ + A + K Sbjct: 89 LQRVLAAGGDARKVVFSGVGKTRAEMRLALDAGILCFNVESAAELDRLNEVAGSMGKIAA 148 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 LR+NP V ++ G + + K + G+ H + Sbjct: 149 ISLRVNPDVDAKTHPYISTGLKQNKFGVAYTEAVALYRKASGLKNLRITGMDCHIGSQLT 208 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224 F A ++ + E +E + LGGG+ D + + + Sbjct: 209 ETSPFIAAIEKILLLVDELASEGIALEHLDLGGGLGICYDDETPPAIGEYIAALLGALQG 268 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---AT 280 + ++ LEPG +V N L T V I KN IVD+++ + L Sbjct: 269 RTQKLILEPGRVLVGNAGVLLTRVEYIKPGEEKNFAIVDAAMNDLMRPALYDAYHGILPV 328 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + V G C GD G + ++ Y ++ + +N Sbjct: 329 VREAHAVQSYEVVGPICETGDFIGHARELA-IAPHSLLAVMSAGAYGMSMSSNYNTRPRA 387 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + ++ Sbjct: 388 AEVMVDGTAVHLVRERETVPQLFS 411 >gi|322807653|emb|CBZ05228.1| diaminopimelate decarboxylase [Clostridium botulinum H04402 065] Length = 428 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 72/398 (18%), Positives = 130/398 (32%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP Y++D+ + +N + K+ A K F M + + + S E Sbjct: 29 KTPLYVMDETLIRDNCRRYITSFDKEKNKVAYAGKAFLTKAMCNLIKEEGLSLDVVSGGE 88 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + F + ++ K E + N T + + +L+K + + + K Sbjct: 89 IFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTFVADNFQELDKINNICKNKNIKQR 148 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 LRI P + + S+ G D E E G H + Sbjct: 149 VILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKAVKKASELENIQFVGFHCHIGSQ 208 Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 ML+ I++ IE + LGGG K+ + + Sbjct: 209 IFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGGFGIYYKEGDEPKKIEEFCKIILD 268 Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + +EPG +IV N+ +V I E + + + ++ Sbjct: 269 KTKSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSIKEIPNIAKYIAVNGGMTDNIRP 328 Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L E + N V G+ C +GDI + V+ D ++ + Y Sbjct: 329 ALYKSEYECVVCNKALDNLLEEVKVVGKCCESGDILIDNVKLPIVETDDLLAILNTGAYG 388 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N +P++ N D T R SY + N Sbjct: 389 YSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQN 426 >gi|194016686|ref|ZP_03055299.1| diaminopimelate decarboxylase [Bacillus pumilus ATCC 7061] gi|194011292|gb|EDW20861.1| diaminopimelate decarboxylase [Bacillus pumilus ATCC 7061] Length = 441 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 127/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + ++ A K F++ MF + S Sbjct: 30 GTPLYVYDVALIRERAKSFQKAFIEEELKAQVAYASKAFSSIAMFQLAKEEGLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ +D A+ I+ + ++ ++ Q+L K+ Sbjct: 90 GELHTAICAGFPVEKIHFHGNNKSRDELKMALEHEIGCIVVDNFYEMKLIEELGQELSKQ 149 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G E K + SE+ + G+ H Sbjct: 150 VKVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQADEAVKQVLGSEVIELLGVHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDFC------- 215 + F I + + +I +LGGG + Sbjct: 210 SQIFDTAGFVLAADKIFLKLDEWRESFGFISTVLNLGGGFGIRYTEEDEPLPATEYVEKI 269 Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 Q +KE +Y + ++EPG ++V + T T+ V + ++ Sbjct: 270 IQAVKENVTRYEFDMPEIWIEPGRSLVGDAGTTLYTIGSSKHVPGIRDYVAVDGGMSDNI 329 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + T + G+ C +GD+ + GD ++ Sbjct: 330 RPALYQAKYEAASANKMSQSHNQTVSIAGKCCESGDMLIWDIDLPELSQGDLLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + + +Y D Sbjct: 390 YGYSMSNNYNRIPRPAVVFVEDGEAQLVVERETYADIVK 428 >gi|307322647|ref|ZP_07601981.1| diaminopimelate decarboxylase [Sinorhizobium meliloti AK83] gi|306891709|gb|EFN22561.1| diaminopimelate decarboxylase [Sinorhizobium meliloti AK83] Length = 447 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 125/384 (32%), Gaps = 23/384 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y + N K + A+K + + L G S E+ Sbjct: 44 TPFYCYSASTIRNAFTLLADKLKPVNALVCFAVKANSNISILKLLADLGCGMDIVSGGEL 103 Query: 64 MLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KI 118 E ++ K A+ + + ++L ++ A+ L + Sbjct: 104 ERALEAGVAPSKIVFSGVGKTRREIRRALEVGIHQLNVESPAELESIREVARDLGCRAPV 163 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENKS 171 R+NP V + + G + +V GL H + + Sbjct: 164 VFRVNPDVDAHTHAKISTGKKGDKFGINIELIKELYAKAAACPELDVAGLAVHIGSQLLN 223 Query: 172 FLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFSEKY 225 + A + + + + + LGGG+ V ++ ++E Sbjct: 224 LSPYRAAYRRLASLVDQLRTLDLPVRRLDLGGGLGINYDFGVGPDVGEYAAIVEETVGGL 283 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL-VIVDSSVEAHVPDYLLYQESA----T 280 ++ +EPG +V L T VL++ E + IVD+++ + L Sbjct: 284 HCELTVEPGRWLVGPAGLLVTEVLNLKEAGGTVLAIVDAAMNDLMRPALYDAVHPVLPLQ 343 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 N + + G C + D+FG + P++ G RI+F Y + + +N ++ Sbjct: 344 NLGNCSAHPYQIVGPVCESSDVFGTYDALPPLQSGVRIAFGCAGAYGASMASTYNSRDLI 403 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D R + D Sbjct: 404 AEVLVDADRFRLIRRRQTIQDLLE 427 >gi|315178745|gb|ADT85659.1| diaminopimelate decarboxylase [Vibrio furnissii NCTC 11218] Length = 417 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 113/378 (29%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S E Sbjct: 27 GTPLYVYSRATLERHWHAFDKSVGDHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSAGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + ++ K A+ + S+L + A + Sbjct: 87 LERVVAAGGDPAKVVFSGVGKTAAEMKRALALKIKCFNVESESELERLNQVAGEMGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G + +++G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPDVYRLAQRLDHISIHGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + F + I+ + +GGG+ P + L + Sbjct: 207 AIEPFIDATDRLLALIDNLKAEGIHIKHLDVGGGLGVVYRDELPPQPSEYAKALLSRLAN 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HQELELIFEPGRAIAANAGVLLTRVEYLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C GD G+ ++ GD ++ Y + +N Sbjct: 327 VSPREGAALTYDLVGPVCETGDFLGKDRSLV-LQQGDLLAVRSAGAYGFAMSSNYNTRTR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + T + Sbjct: 386 AAEVIVDGETTHVVRQRE 403 >gi|116254060|ref|YP_769898.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. viciae 3841] gi|115258708|emb|CAK09813.1| putative diaminopimelate decarboxylase [Rhizobium leguminosarum bv. viciae 3841] Length = 422 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 108/389 (27%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + A+K + + TL + G S Sbjct: 25 VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84 Query: 62 EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ A+ + + +L +A Sbjct: 85 ELRRALAADIPANRIMFSGVGKTPSEMDFALEAGIYCFNVESEPELEILNQRAVSAGKKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + RINP V + ++ G + V G+ H + Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIYAHAARLPGIEVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F K + I + +GGG+ KD + +K Sbjct: 205 TELQPFDDAFKLLHDLVATLRADGHTIHHVDIGGGLGIPYKDDNNPPPLPDAYAAIVKNQ 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I EPG IV N L T VL + + K VIVD ++ + L Sbjct: 265 LRGLDCKIITEPGRLIVGNAGILVTEVLYVKDGGEKTFVIVDGAMNDLIRPTLYEAYHEI 324 Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A V G C GD K GD ++ Y + +N Sbjct: 325 RPVTISAANAPRIRADVVGPVCETGDYLALDREMAMPKPGDLMAVSTAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +Y + + Sbjct: 385 SRLLVPEVLVRGSDFHTIRPRRTYAELIS 413 >gi|182701657|ref|ZP_02613665.2| diaminopimelate decarboxilase [Clostridium botulinum NCTC 2916] gi|226950770|ref|YP_002805861.1| diaminopimelate decarboxilase [Clostridium botulinum A2 str. Kyoto] gi|182670179|gb|EDT82155.1| diaminopimelate decarboxilase [Clostridium botulinum NCTC 2916] gi|226843877|gb|ACO86543.1| diaminopimelate decarboxilase [Clostridium botulinum A2 str. Kyoto] Length = 422 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 72/398 (18%), Positives = 130/398 (32%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP Y++D+ + +N + K+ A K F M + + + S E Sbjct: 23 KTPLYVMDETLIRDNCRRYITSFDKEKNKVAYAGKAFLTKAMCNLIKEEGLSLDVVSGGE 82 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + F + ++ K E + N T + + +L+K + + + K Sbjct: 83 IFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTFVADNFQELDKINNICKNKNIKQR 142 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 LRI P + + S+ G D E E G H + Sbjct: 143 VILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKAVKKASELENIQFVGFHCHIGSQ 202 Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 ML+ I++ IE + LGGG K+ + + Sbjct: 203 IFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGGFGIYYKEGDEPKKIEEFCKIILD 262 Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + +EPG +IV N+ +V I E + + + ++ Sbjct: 263 KTKSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSIKEIPNIAKYIAVNGGMTDNIRP 322 Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L E + N V G+ C +GDI + V+ D ++ + Y Sbjct: 323 ALYKSEYECVVCNKALDNLLEEVKVVGKCCESGDILIDNVKLPIVETDDLLAILNTGAYG 382 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N +P++ N D T R SY + N Sbjct: 383 YSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQN 420 >gi|315497547|ref|YP_004086351.1| diaminopimelate decarboxylase [Asticcacaulis excentricus CB 48] gi|315415559|gb|ADU12200.1| diaminopimelate decarboxylase [Asticcacaulis excentricus CB 48] Length = 438 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 113/399 (28%), Gaps = 35/399 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIR---------KNAGVKLLLALKCFAAWGMFDTLNQYM 52 + TP Y+ + KN + A K + + TL + Sbjct: 25 VGTPLYVYSSATFERHFQVFSQALWAQDALQSPKNEAPLIAYATKANSNLAVLQTLAEQG 84 Query: 53 DGTTSSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKD 109 G + S E+ E ++ K E A + + +L + Sbjct: 85 AGADTVSEGEIRKALTAGIPPERIVFSGVGKTDEEMAFALKTGIYQLNVESKPELERLSH 144 Query: 110 KAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNV--NG 160 A L I +RINP V + G ++ I + N+ G Sbjct: 145 VAASLGLVAPIVIRINPGVGAGGHAKITTGGAKDKFGVSAREAIALYGQAAADPNIAPMG 204 Query: 161 LMFHNNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD----KDYPVKD 213 + H + A + +E + LGGG+ + +D Sbjct: 205 IACHIGSQITDLAPMQAAFSKMRGWVQELRAGGLSVERLDLGGGLGVPYFNMSEPPSPED 264 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVP 270 F Q + V+ EPG I N L + V+ I E + D+++ + Sbjct: 265 FAQMVALTVGNLGVRYTFEPGRLIAANAGILVSRVIHIHEREDSGQKFLVVDAAMNDLIR 324 Query: 271 DYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + T V G C GD F +K GD ++F Y Sbjct: 325 PAMYDAYHDIRPVVAVQTNETATYDVVGPVCETGDTFTRGRDLPALKAGDLVAFMSAGAY 384 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + + SY + N Sbjct: 385 GAVMGSEYNSRPLAPEVLVRDTDWAVVRPRPSYEEMMNR 423 >gi|168182039|ref|ZP_02616703.1| diaminopimelate decarboxylase [Clostridium botulinum Bf] gi|237796776|ref|YP_002864328.1| diaminopimelate decarboxilase [Clostridium botulinum Ba4 str. 657] gi|182674869|gb|EDT86830.1| diaminopimelate decarboxylase [Clostridium botulinum Bf] gi|229260999|gb|ACQ52032.1| diaminopimelate decarboxilase [Clostridium botulinum Ba4 str. 657] Length = 428 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 73/398 (18%), Positives = 130/398 (32%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP Y++D+ + +N + K+ A K F M + + + S E Sbjct: 29 KTPLYVMDETLIRDNCRRYVTSFNKEKNKVAYAGKAFLTKAMCNLIKEEGLSLDVVSGGE 88 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + F + ++ K E + N T + + +L+K + + + K Sbjct: 89 IFTAYRSGFPMDKVYFHGNNKTMEEIEMAINLGVGTFVADNFQELDKINNICKNKNIKQR 148 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 LRI P + + S+ G D E E G H + Sbjct: 149 VILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKAVKKAYELENIQFVGFHCHIGSQ 208 Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 MLK I++ IE + LGGG K+ + + Sbjct: 209 IFETKPYEEEIEIMLKLIKRTNEELNIDIEELDLGGGFGIYYKEGDEPKKIEEFCKIILD 268 Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + +EPG +IV N+ +V I E + + + ++ Sbjct: 269 KARSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSIKEIPNVAKYIAVNGGMTDNIRP 328 Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L E + N V G+ C +GDI + V+ D ++ + Y Sbjct: 329 ALYKSEYECVVCNKALDNLLEEVKVVGKCCESGDILIDNVKLPIVETDDLLAILNTGAYG 388 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N +P++ N D T R SY + N Sbjct: 389 YSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQN 426 >gi|170724853|ref|YP_001758879.1| diaminopimelate decarboxylase [Shewanella woodyi ATCC 51908] gi|169810200|gb|ACA84784.1| diaminopimelate decarboxylase [Shewanella woodyi ATCC 51908] Length = 414 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 62/382 (16%), Positives = 116/382 (30%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + N + A+K + + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFDSAVANHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85 Query: 63 V-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + + ++ K + A+ + ++L + A KL K Sbjct: 86 LSRVIEAGGDPKKVVFSGVGKTVEEMEMALNLGIHCFNVESAAELEQLNLVALKLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNC--- 167 + LR+NP V ++ G D V G+ H Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMDDAEAIFARAHALPGLQVKGVDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 E K FL + + IE +GGG+ T D + L E Sbjct: 206 EIKPFLDAMDRILALIDRLAEQDIIIEHFDVGGGLGVTYDDETPPQPDVYASALVERLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + + K+ +VD ++ + L Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKGNSDKHFALVDGAMNDLIRPSLYSAWQKIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + G C GD G+ ++ D ++ Y + +N Sbjct: 326 VPREGESRNYDIVGPVCETGDFLGKERELC-LEPQDYLAVRSSGAYGFTMSSNYNSRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + + + + Sbjct: 385 AEVMVDGEQAHLIRQREKLSQL 406 >gi|153939469|ref|YP_001392682.1| diaminopimelate decarboxilase [Clostridium botulinum F str. Langeland] gi|170755777|ref|YP_001782960.1| diaminopimelate decarboxilase [Clostridium botulinum B1 str. Okra] gi|152935365|gb|ABS40863.1| diaminopimelate decarboxilase [Clostridium botulinum F str. Langeland] gi|169120989|gb|ACA44825.1| diaminopimelate decarboxilase [Clostridium botulinum B1 str. Okra] gi|295320664|gb|ADG01042.1| diaminopimelate decarboxilase [Clostridium botulinum F str. 230613] Length = 428 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 72/398 (18%), Positives = 130/398 (32%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP Y++D+ + +N + K+ A K F M + + + S E Sbjct: 29 KTPLYVMDETLIRDNCRRYVTSFNKEKNKVAYAGKAFLTKAMCNLIKEEGLSLDVVSGGE 88 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + F + ++ K E + N T + + +L+K + + + K Sbjct: 89 IFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTFVADNFQELDKINNICKNKNIKQR 148 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 LRI P + + S+ G D E E G H + Sbjct: 149 VILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKAVKKASELENIQFVGFHCHIGSQ 208 Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 ML+ I++ IE + LGGG K+ + + Sbjct: 209 IFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGGFGIYYKEGDEPKKIEEFCKIILD 268 Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + +EPG +IV N+ +V I E + + + ++ Sbjct: 269 KTKSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSIKEIPNIAKYIAVNGGMTDNIRP 328 Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L E + N V G+ C +GDI + V+ D ++ + Y Sbjct: 329 ALYKSEYECVVCNKALDNLLEEVKVVGKCCESGDILIDNVKLPIVETDDLLAILNTGAYG 388 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N +P++ N D T R SY + N Sbjct: 389 YSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQN 426 >gi|121593140|ref|YP_985036.1| diaminopimelate decarboxylase [Acidovorax sp. JS42] gi|120605220|gb|ABM40960.1| diaminopimelate decarboxylase [Acidovorax sp. JS42] Length = 431 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 56/389 (14%), Positives = 114/389 (29%), Gaps = 28/389 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ +L+ L V++ A+K ++ + ++ G S E Sbjct: 34 GTPLYVYSHAAMLDALGAYQRGFAGRKVQICYAMKANSSLAVLQLFARHGCGFDIVSAGE 93 Query: 63 VML--GHEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + V + A+ + ++L+ + AQ + Sbjct: 94 LQRVIAAGGDPAKVIFSGVGKTRAEMRQALEVGIGCFNVESEAELDVLSEVAQSMGLRAP 153 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 I +R+NP+V ++ G + V G+ H + Sbjct: 154 ISIRVNPNVDAKTHPYISTGLKGNKFGIAHERTVATYQRAAALPGLRVVGIDCHIGSQIT 213 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + + + I GGG+ + K Sbjct: 214 EESPYLDAMDRMLDLVQAIEAAGIAVHHIDFGGGLGIDYNGDTPPRADALWAKLLAKLDA 273 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 Q+ +EPG ++V N T VL + + + D+++ + A Sbjct: 274 RGYGDRQLMIEPGRSLVGNAGVCLTEVLYLKPGEQKNFCIVDAAMNDLPRPAMYQAYHAI 333 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + V G C +GD G V GD ++ Y + + +N Sbjct: 334 VPLQATAPTAVSHVYDVVGPICESGDWIGRDRNLA-VAAGDMLAVLSAGAYCSSMGSTYN 392 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 P + + S ND + Sbjct: 393 TRPRPAEVLVDGARAHLIRTRESVNDIFR 421 >gi|91786679|ref|YP_547631.1| diaminopimelate decarboxylase [Polaromonas sp. JS666] gi|91695904|gb|ABE42733.1| diaminopimelate decarboxylase [Polaromonas sp. JS666] Length = 427 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 120/385 (31%), Gaps = 27/385 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ K +L+ L V++ A+K ++ G+ G S E Sbjct: 34 GTPLFVYSKAAMLSALAAYQRGFAGRDVQICYAMKANSSLGVLQVFAGAGCGFDIVSGGE 93 Query: 63 VMLGHEKFG-GETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKK 117 + G ++ K A+ + + ++L+ A L Sbjct: 94 LERVLAAGGQANKIIFSGVGKTRAEMRQALAAGIGCFNVESEAELDVLSGVAAAMNLRAP 153 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + +R+NP+V ++ G +D + V G+ H + Sbjct: 154 VSIRVNPNVDPKTHPYISTGLKGNKFGVAHEDALRIYQHAAALPGLQVAGIDCHIGSQIT 213 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS- 226 + + + ++E I GGG+ + ++ K Sbjct: 214 ETTPYLDAMDRVLDLVASIESAGIELEHIDFGGGLGINYNGDTPPEADVLWRQLLAKLDA 273 Query: 227 -----VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 ++ +EPG ++V N T VL + KN I+D+++ + A Sbjct: 274 RGYGSKKLMIEPGRSLVGNAGICLTEVLYLKPGEQKNFCIIDAAMNDLPRPAMYQAFHAI 333 Query: 281 IYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + G T V G C +GD G V GD ++ Y ++ + +N Sbjct: 334 VPAVAGGPAPATTYDVVGPVCESGDWIGRDRPLA-VNAGDVLAVLSAGAYCMSMASNYNT 392 Query: 337 INMPTIAVKNVDGTIKAIREFSYND 361 + + R D Sbjct: 393 RGRAAEVLVDGSQAHLIRRREDAQD 417 >gi|145588275|ref|YP_001154872.1| diaminopimelate decarboxylase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046681|gb|ABP33308.1| diaminopimelate decarboxylase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 432 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 61/391 (15%), Positives = 121/391 (30%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYI----RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 TP Y+ K L + ++ A+K + + + + G Sbjct: 36 GTPLYVYSKSALSKAYQAYDKACVDKQGKRRARIHYAMKANSNLAVINCFKELGAGFDLV 95 Query: 59 SLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL- 114 S E+ ++ + K + A + I ++++L+K A +L Sbjct: 96 SGGELARALAIGADPKSLVFAGVGKSAKEIAEALKAGVKCINVESIAELHKINRVATELG 155 Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNN 166 I LR+NP V ++ G ++ + +V G+ H Sbjct: 156 LRAPISLRVNPDVDAQTHPYISTGLKGNKFGIAYHEVLKTYREASQLAQIDVVGIDCHIG 215 Query: 167 CENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + + + L + + I + LGGG+ + D D Sbjct: 216 SQITTTAPYLDALDKVLDLVAQLKKEGIVIHHLDLGGGLGISYSDETPPDITDFTDTLLN 275 Query: 224 KY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQ 276 + + + LEPG ++V N L TTV + + + D+++ + L Sbjct: 276 RVAERGFGHLDVVLEPGRSLVGNAGVLLTTVEYLKPGAEKNFCIVDAAMTELMRPALYEA 335 Query: 277 ES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 T V G C +GD G V+ GD ++ Y + Sbjct: 336 HHGIVPVQAKQAKALTYDVVGPVCESGDWLGRDRHLA-VEEGDLLAILSAGAYGFVMASN 394 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 +N P + + + +D + Sbjct: 395 YNTRPKPAEIIVDGKNAYVIRARENTSDLFA 425 >gi|261210168|ref|ZP_05924465.1| diaminopimelate decarboxylase [Vibrio sp. RC341] gi|260840708|gb|EEX67257.1| diaminopimelate decarboxylase [Vibrio sp. RC341] Length = 417 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 111/378 (29%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S+ E Sbjct: 27 GTPLYIYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ + +L++ A +L Sbjct: 87 LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELHRLNKVAAELGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G E +V+G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAEVYRLAHSLPNLDVHGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F + I + +GGG+ +D + K ++ Sbjct: 207 ALAPFIDATDRLLALIDSLKAQGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 266 Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279 EPG AI N L T V + I+D+++ + L Sbjct: 267 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C D G+ ++ GD ++ Y + +N Sbjct: 327 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LEEGDLLAVRSSGAYGFTMSSNYNTRPR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + T + Sbjct: 386 VAEVMVDGNKTYLVRQRE 403 >gi|240138367|ref|YP_002962839.1| diaminopimelate decarboxylase [Methylobacterium extorquens AM1] gi|240008336|gb|ACS39562.1| diaminopimelate decarboxylase [Methylobacterium extorquens AM1] Length = 422 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 112/389 (28%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL G S Sbjct: 25 VGTPFYCYSTATLERHYRVFAEAFAGDDALVCFAMKANSNQAVLATLAHQGAGMDIVSEG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ GE ++ ++ A+ +N + +L + A + Sbjct: 85 ELRRALAAGVPGERIVFSGVGKTREEMAAALDANILCFNVESEPELAALSEVAVARGRKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + +R+NP V + ++ G + G+ H + Sbjct: 145 PVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARAVYAGAARLPGLEIVGVDAHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + + + ++ + GGG+ L+ Sbjct: 205 TDLTPFDNAARLLCELARDLLADGHRLHHVDFGGGLGIPYRDDNAPPPDPAALAAILRPH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + ++ E G I N L T V+ + + K VIVD ++ + L A Sbjct: 265 FKPLGLRPVFEIGRMIAGNAGVLVTRVIYVKPTDEKTFVIVDGAMNDLIRPTLYEAFHAL 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 TA V G C +GD V GD I+ Y + +N Sbjct: 325 RPVREPAPDTPRLTADVVGPVCESGDYLALGREMPMVAPGDLIAVMSAGAYGAVQACTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + SY+D Sbjct: 385 SRRLVPEVLVTGDRSAVVRPRPSYDDLIR 413 >gi|294851220|ref|ZP_06791893.1| diaminopimelate decarboxylase [Brucella sp. NVSL 07-0026] gi|294819809|gb|EFG36808.1| diaminopimelate decarboxylase [Brucella sp. NVSL 07-0026] Length = 421 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + + ALK + + L + G + S Sbjct: 25 VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K A+ + + +L + A Sbjct: 85 EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G + + NV G+ H + Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + KE I + +GGG+ P + Q + + Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + ++ EPG IV N L T V+ + + + KN VIVD+++ + L Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKKGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A G C GD G GD I+ Y + +N Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y + Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413 >gi|327483026|gb|AEA77433.1| Diaminopimelate decarboxylase [Vibrio cholerae LMA3894-4] Length = 417 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 110/378 (29%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ +TL + G S+ E Sbjct: 27 GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ + +L + A +L Sbjct: 87 LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELLRLNKVAGELGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LRINP V ++ G + +V+G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNLDVHGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F + I + +GGG+ +D + K ++ Sbjct: 207 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 266 Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279 EPG AI N L T V + I+D+++ + L Sbjct: 267 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C D G+ ++ GD ++ Y + +N Sbjct: 327 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LQEGDLLAVRSSGAYGFTMSSNYNTRPR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + T + Sbjct: 386 VAEVMVDGNKTYLVRQRE 403 >gi|289548601|ref|YP_003473589.1| diaminopimelate decarboxylase [Thermocrinis albus DSM 14484] gi|289182218|gb|ADC89462.1| diaminopimelate decarboxylase [Thermocrinis albus DSM 14484] Length = 416 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 57/381 (14%), Positives = 112/381 (29%), Gaps = 25/381 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + L G + A+K + + G S E Sbjct: 31 GTPLYVYSASYIRDRLREYRESF--PGALICYAVKANFNPHIVSLMAGEGAGADIVSGGE 88 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + + Y K + D + +L ++L KK+ Sbjct: 89 LYVALMAGVNPSRIVYAGVGKTVKELVEAIKADILMFNVESRMELEILNQLGEQLGKKVR 148 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170 + R+NP V S+ G + + V G+ H + Sbjct: 149 ISIRVNPHVDPKTHPYIATGMKKSKFGIDIDRAEEEYRYALSMKNIQVVGVHCHIGSQIL 208 Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSE 223 + + ++ + +++++ +GGG+ K + L + Sbjct: 209 DTSPYVEAVSKVVDLYRSLEDQGIELQYLDIGGGLGIKYKPEDRALTPMELSSALSPILQ 268 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282 K + LEPG ++V N L T V + + K+ VIVD+ + + + + Sbjct: 269 KVKATVVLEPGRSLVGNAGVLITQVQFVKDKGEKHFVIVDAGMNDLIRPAIYDAYHHILP 328 Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C GD + + V GD ++ Y + +N Sbjct: 329 VVKRGRPSIVTDVVGPICETGDFLAKDRQLEEVGRGDYLAVLSAGAYGFAMSSHYNVRPR 388 Query: 340 PTIAVKNVDGTIKAIREFSYN 360 + + Y Sbjct: 389 ACEVLVDRGYVRVIREREDYQ 409 >gi|306843420|ref|ZP_07476021.1| diaminopimelate decarboxylase [Brucella sp. BO1] gi|306276111|gb|EFM57811.1| diaminopimelate decarboxylase [Brucella sp. BO1] Length = 421 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + + ALK + + L + G + S Sbjct: 25 VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K A+ + + +L + A Sbjct: 85 EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G + + NV G+ H + Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + KE I + +GGG+ P + + + + Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAEIVAKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + ++ EPG IV N L T V+ + E + KN VIVD+++ + L Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A G C GD G GD I+ Y + +N Sbjct: 325 RPVIVPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y + Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413 >gi|241206546|ref|YP_002977642.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860436|gb|ACS58103.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 422 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 109/389 (28%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + A+K + + TL + G S Sbjct: 25 VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84 Query: 62 EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ A+ + + +L +A Sbjct: 85 ELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIYCFNVESEPELEILNQRAVSAGKKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + RINP V + ++ G + V G+ H + Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIYAHAAKLPGIEVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F K + I + +GGG+ KD + +K Sbjct: 205 TELQPFDDAFKLLHDLVATLRADGHTIHHVDIGGGLGIPYKDDNNPPPLPDAYAAIVKNQ 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + +I EPG IV N L T VL + + K VIVD ++ + L Sbjct: 265 LRGLNCKIITEPGRLIVGNAGILVTEVLYVKDGGEKTFVIVDGAMNDLIRPTLYEAYHEI 324 Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A V G C GD K GD ++ Y + +N Sbjct: 325 RPVTISAANAPRIRADVVGPVCETGDYLALDREMAMPKPGDLMAVSTAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +Y + + Sbjct: 385 SRLLVPEVLVRGSDFHTIRPRRTYAELIS 413 >gi|218778271|ref|YP_002429589.1| diaminopimelate decarboxylase [Desulfatibacillum alkenivorans AK-01] gi|218759655|gb|ACL02121.1| diaminopimelate decarboxylase [Desulfatibacillum alkenivorans AK-01] Length = 417 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 120/385 (31%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ L + + + + K + G S Sbjct: 25 LGTPLFIYSHATLTRHFQAFDKAFGDVDHIICYSAKANTNGAILKMFADMGTGLDVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HK 116 E+ G AY K + + N + +L +A+ L Sbjct: 85 ELHRGLKAGIPANKIAYAGVGKTQDEIDLALNSGILMFNVESFEELQAINARAKALGKKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCEN 169 I LR+NP+V ++ G + +E+ V G+ FH + Sbjct: 145 PISLRVNPNVDAKTHPYISTGMKKNKFGIAKEAVVEAYKAAHELDSTEVVGIDFHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSE 223 F +++++ I ++ +GGG+ D + + + + + Sbjct: 205 TQVGPFVEAMESVKSLAAELKGMGIGINYLDVGGGLGINYDDEEPPEPDEYAKAICKVIA 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---A 279 + + + LEPG A+V N + T L + E KN +IVD+ + + + Sbjct: 265 DFPITVVLEPGRAMVGNAGIMVTRFLYLKEGATKNFIIVDAGMNDLIRPSIYGAFHLIQP 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P T V G C + D + V GD ++ Y + +N Sbjct: 325 VNKREGDPLTGDVVGPICESTDFLAKDREIGAVVPGDLLAVMSAGAYGFAMSSNYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + + +Y D Sbjct: 385 ACEVMVKGNAFEVIRQRENYEDLTR 409 >gi|23502831|ref|NP_698958.1| diaminopimelate decarboxylase [Brucella suis 1330] gi|62290831|ref|YP_222624.1| LysA, diaminopimelate decarboxylase [Brucella abortus bv. 1 str. 9-941] gi|82700743|ref|YP_415317.1| diaminopimelate decarboxylase [Brucella melitensis biovar Abortus 2308] gi|148560505|ref|YP_001259800.1| diaminopimelate decarboxylase [Brucella ovis ATCC 25840] gi|161619901|ref|YP_001593788.1| diaminopimelate decarboxylase [Brucella canis ATCC 23365] gi|189025050|ref|YP_001935818.1| diaminopimelate decarboxylase [Brucella abortus S19] gi|225628182|ref|ZP_03786217.1| diaminopimelate decarboxylase [Brucella ceti str. Cudo] gi|225853419|ref|YP_002733652.1| diaminopimelate decarboxylase [Brucella melitensis ATCC 23457] gi|237816345|ref|ZP_04595338.1| diaminopimelate decarboxylase [Brucella abortus str. 2308 A] gi|254690121|ref|ZP_05153375.1| diaminopimelate decarboxylase [Brucella abortus bv. 6 str. 870] gi|254694611|ref|ZP_05156439.1| diaminopimelate decarboxylase [Brucella abortus bv. 3 str. Tulya] gi|254696236|ref|ZP_05158064.1| diaminopimelate decarboxylase [Brucella abortus bv. 2 str. 86/8/59] gi|254700621|ref|ZP_05162449.1| diaminopimelate decarboxylase [Brucella suis bv. 5 str. 513] gi|254704991|ref|ZP_05166819.1| diaminopimelate decarboxylase [Brucella suis bv. 3 str. 686] gi|254707493|ref|ZP_05169321.1| diaminopimelate decarboxylase [Brucella pinnipedialis M163/99/10] gi|254708966|ref|ZP_05170777.1| diaminopimelate decarboxylase [Brucella pinnipedialis B2/94] gi|254731154|ref|ZP_05189732.1| diaminopimelate decarboxylase [Brucella abortus bv. 4 str. 292] gi|256030493|ref|ZP_05444107.1| diaminopimelate decarboxylase [Brucella pinnipedialis M292/94/1] gi|256158479|ref|ZP_05456377.1| diaminopimelate decarboxylase [Brucella ceti M490/95/1] gi|256253898|ref|ZP_05459434.1| diaminopimelate decarboxylase [Brucella ceti B1/94] gi|256258375|ref|ZP_05463911.1| diaminopimelate decarboxylase [Brucella abortus bv. 9 str. C68] gi|256263101|ref|ZP_05465633.1| diaminopimelate decarboxylase [Brucella melitensis bv. 2 str. 63/9] gi|260169399|ref|ZP_05756210.1| diaminopimelate decarboxylase [Brucella sp. F5/99] gi|260546098|ref|ZP_05821838.1| diaminopimelate decarboxylase [Brucella abortus NCTC 8038] gi|260567535|ref|ZP_05838005.1| diaminopimelate decarboxylase [Brucella suis bv. 4 str. 40] gi|260755660|ref|ZP_05868008.1| diaminopimelate decarboxylase [Brucella abortus bv. 6 str. 870] gi|260758885|ref|ZP_05871233.1| diaminopimelate decarboxylase [Brucella abortus bv. 4 str. 292] gi|260760609|ref|ZP_05872952.1| diaminopimelate decarboxylase [Brucella abortus bv. 2 str. 86/8/59] gi|260884685|ref|ZP_05896299.1| diaminopimelate decarboxylase [Brucella abortus bv. 9 str. C68] gi|261214935|ref|ZP_05929216.1| diaminopimelate decarboxylase [Brucella abortus bv. 3 str. Tulya] gi|261221035|ref|ZP_05935316.1| diaminopimelate decarboxylase [Brucella ceti B1/94] gi|261314977|ref|ZP_05954174.1| diaminopimelate decarboxylase [Brucella pinnipedialis M163/99/10] gi|261316465|ref|ZP_05955662.1| diaminopimelate decarboxylase [Brucella pinnipedialis B2/94] gi|261751130|ref|ZP_05994839.1| diaminopimelate decarboxylase [Brucella suis bv. 5 str. 513] gi|261755692|ref|ZP_05999401.1| diaminopimelate decarboxylase [Brucella suis bv. 3 str. 686] gi|261758922|ref|ZP_06002631.1| diaminopimelate decarboxylase [Brucella sp. F5/99] gi|265987535|ref|ZP_06100092.1| diaminopimelate decarboxylase [Brucella pinnipedialis M292/94/1] gi|265996995|ref|ZP_06109552.1| diaminopimelate decarboxylase [Brucella ceti M490/95/1] gi|297247217|ref|ZP_06930935.1| diaminopimelate decarboxylase [Brucella abortus bv. 5 str. B3196] gi|23348856|gb|AAN30873.1| diaminopimelate decarboxylase [Brucella suis 1330] gi|62196963|gb|AAX75263.1| LysA, diaminopimelate decarboxylase [Brucella abortus bv. 1 str. 9-941] gi|82616844|emb|CAJ11940.1| Orn/DAP/Arg decarboxylase, family 2:ATP/GTP-binding site motif A (P-loop):Diaminopimelate decarboxylase [Brucella melitensis biovar Abortus 2308] gi|148371762|gb|ABQ61741.1| diaminopimelate decarboxylase [Brucella ovis ATCC 25840] gi|161336712|gb|ABX63017.1| diaminopimelate decarboxylase [Brucella canis ATCC 23365] gi|189020622|gb|ACD73344.1| diaminopimelate decarboxylase [Brucella abortus S19] gi|225617007|gb|EEH14054.1| diaminopimelate decarboxylase [Brucella ceti str. Cudo] gi|225641784|gb|ACO01698.1| diaminopimelate decarboxylase [Brucella melitensis ATCC 23457] gi|237788412|gb|EEP62627.1| diaminopimelate decarboxylase [Brucella abortus str. 2308 A] gi|260096205|gb|EEW80081.1| diaminopimelate decarboxylase [Brucella abortus NCTC 8038] gi|260157053|gb|EEW92133.1| diaminopimelate decarboxylase [Brucella suis bv. 4 str. 40] gi|260669203|gb|EEX56143.1| diaminopimelate decarboxylase [Brucella abortus bv. 4 str. 292] gi|260671041|gb|EEX57862.1| diaminopimelate decarboxylase [Brucella abortus bv. 2 str. 86/8/59] gi|260675768|gb|EEX62589.1| diaminopimelate decarboxylase [Brucella abortus bv. 6 str. 870] gi|260874213|gb|EEX81282.1| diaminopimelate decarboxylase [Brucella abortus bv. 9 str. C68] gi|260916542|gb|EEX83403.1| diaminopimelate decarboxylase [Brucella abortus bv. 3 str. Tulya] gi|260919619|gb|EEX86272.1| diaminopimelate decarboxylase [Brucella ceti B1/94] gi|261295688|gb|EEX99184.1| diaminopimelate decarboxylase [Brucella pinnipedialis B2/94] gi|261304003|gb|EEY07500.1| diaminopimelate decarboxylase [Brucella pinnipedialis M163/99/10] gi|261738906|gb|EEY26902.1| diaminopimelate decarboxylase [Brucella sp. F5/99] gi|261740883|gb|EEY28809.1| diaminopimelate decarboxylase [Brucella suis bv. 5 str. 513] gi|261745445|gb|EEY33371.1| diaminopimelate decarboxylase [Brucella suis bv. 3 str. 686] gi|262551463|gb|EEZ07453.1| diaminopimelate decarboxylase [Brucella ceti M490/95/1] gi|263093002|gb|EEZ17152.1| diaminopimelate decarboxylase [Brucella melitensis bv. 2 str. 63/9] gi|264659732|gb|EEZ29993.1| diaminopimelate decarboxylase [Brucella pinnipedialis M292/94/1] gi|297174386|gb|EFH33733.1| diaminopimelate decarboxylase [Brucella abortus bv. 5 str. B3196] gi|326409982|gb|ADZ67047.1| diaminopimelate decarboxylase [Brucella melitensis M28] gi|326539699|gb|ADZ87914.1| diaminopimelate decarboxylase [Brucella melitensis M5-90] Length = 421 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + + ALK + + L + G + S Sbjct: 25 VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K A+ + + +L + A Sbjct: 85 EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G + + NV G+ H + Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + KE I + +GGG+ P + Q + + Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + ++ EPG IV N L T V+ + E + KN VIVD+++ + L Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A G C GD G GD I+ Y + +N Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y + Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413 >gi|308271344|emb|CBX27952.1| Diaminopimelate decarboxylase [uncultured Desulfobacterium sp.] Length = 427 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 71/385 (18%), Positives = 123/385 (31%), Gaps = 22/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+ L + K + + K + ++ G S Sbjct: 35 IGTPLYIYSHATLKRHFKAFNDAFKGVNKLVCFSAKANTNLAILSLFSKLGGGLDIVSGG 94 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 E+ G + Y+ K + ++ +L +A L K Sbjct: 95 ELYRGLKAGYASNKIVYSGVGKRIDEIDYALKMGILMFNVESMEELEIVDQRAGLLKKKA 154 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169 + +R+NP V ++ G + +E+ V GL H + Sbjct: 155 PVAIRVNPDVDPKTHPYISTGMKKNKFGINIEAAMEAYKVAAKLKNIKVIGLDCHIGSQI 214 Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223 F +LK + K+ I+++ LGGG+ T D ++ +KE Sbjct: 215 TQTGPFKDALYILKTMIKDLAACKINIKYLDLGGGLGITYNDEEPPDPVEYANAIKEVIG 274 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQES---A 279 V++ EPG IV N L T VL +K +IVD+ + V L Sbjct: 275 DTKVKLIFEPGRVIVGNAGILVTKVLYRKSTGVKEFIIVDAGMNDLVRPTLYEAFHAIKP 334 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + A + G C +GD + V+ GD ++ Y + + Sbjct: 335 VVDSDNEEIKADIVGPICESGDFLALDRNIQKVEQGDLLAVMSSGAYGFVMSSNYCSRLK 394 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + N D A + Y D Sbjct: 395 LAEVMVNGDKFQVARKRQKYEDLTR 419 >gi|221134092|ref|ZP_03560397.1| putative diaminopimelate decarboxylase [Glaciecola sp. HTCC2999] Length = 416 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 127/387 (32%), Gaps = 25/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ L + + + A+K + G+ L + G S E Sbjct: 26 GTPTYVYSRKTLERHWHKFDEALGDHPHLVCFAVKANSNIGVLSVLAKLGSGFDIVSGGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + ++ K + N + ++L++ A KL + Sbjct: 86 LKRVIAAGGDPQKVVFSGVGKTADEIEFALQQNILCFNVESFAELDRINAVAAKLDRPAR 145 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 LRINP V + ++ G +E+ + G+ H + Sbjct: 146 ISLRINPDVDANTHPYISTGLKANKFGIAHTKAVETYLYAKALSYLEIKGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 F L+ + E IE + +GGG+ T + P + ++ Sbjct: 206 ETAPFVDALERLLGLVDELATHDIHIEHLDVGGGLGVTYANETPPLPSEYASAIAQKMQG 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI- 281 + ++I +EPG AI N L T V + +N I+D+++ + L + Sbjct: 266 REHMKIIMEPGRAIAANAGVLLTKVEFLKQNEDKHFAIIDAAMNDLLRPALYSAWQNIVP 325 Query: 282 ---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C GD G+ + D ++ + Y + +N Sbjct: 326 ITPRDDVAAAVYDVVGPVCETGDFLGKDRELA-IVPDDILAVKSAGAYGFVMASNYNTRA 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + D I D ++N Sbjct: 385 RPAEIMVDGDHVIVVREREKVEDLWHN 411 >gi|163844005|ref|YP_001628409.1| diaminopimelate decarboxylase [Brucella suis ATCC 23445] gi|163674728|gb|ABY38839.1| diaminopimelate decarboxylase [Brucella suis ATCC 23445] Length = 421 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + + ALK + + L + G + S Sbjct: 25 VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K A+ + + +L + A Sbjct: 85 EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G + + NV G+ H + Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + KE I + +GGG+ P + Q + + Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + ++ EPG IV N L T V+ + E + KN VIVD+++ + L Sbjct: 265 IKPLGLKTVFEPGRRIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A G C GD G GD I+ Y + +N Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y + Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413 >gi|171060084|ref|YP_001792433.1| diaminopimelate decarboxylase [Leptothrix cholodnii SP-6] gi|170777529|gb|ACB35668.1| diaminopimelate decarboxylase [Leptothrix cholodnii SP-6] Length = 422 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 116/388 (29%), Gaps = 26/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + +L+ L + A+K ++ + T + G S E Sbjct: 31 GTPLYVYSQASMLDALAAYQRALAGRPHLICYAMKANSSLAVLQTFARAGCGFDIVSGGE 90 Query: 63 VMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ + + S+L A +L Sbjct: 91 LQRVLAAGASASKVVFSGVGKTRTEMRQALEAGVRCFNVESESELALLSQVAVELGVRAP 150 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G + + V G+ H + Sbjct: 151 VSLRVNPDVDAGTHPYISTGLKGNKFGIAHEQALAVYRHAAQLPGIAVRGIDCHIGSQLT 210 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 F L ++ + + + LGGG+ T D + + + + Sbjct: 211 EVAPFLDALDRILDLVEAIEAAGITLHHLDLGGGLGITYTDETPPSADELIAQLLARIDA 270 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278 +I EPG ++V N L T VL + + D+++ + + Sbjct: 271 RGHGHREIVFEPGRSLVGNAGVLLTEVLYLKPGETKNFCIVDAAMNDLMRPAMYEAWMGI 330 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + T V G C +GD G V GD ++ Y + + +N Sbjct: 331 VPCTERDAPAVTWDVVGPVCESGDWLGRERELA-VAPGDHLAILSAGAYGMAMASNYNTR 389 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + R S + Y N Sbjct: 390 GRAAEVMVRGHQATLIRRRESAAELYAN 417 >gi|158426283|ref|YP_001527575.1| diaminopimelate decarboxylase [Azorhizobium caulinodans ORS 571] gi|158333172|dbj|BAF90657.1| diaminopimelate decarboxylase [Azorhizobium caulinodans ORS 571] Length = 420 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 58/392 (14%), Positives = 111/392 (28%), Gaps = 27/392 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + L ALK + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHYRVFKAAFAEREMLLCYALKANSNQAVIATLARMGAGADIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E+ GE ++ ++ A+ + + +L+ A + + Sbjct: 85 ELKRALAAGIPGERIVFSGVGKTREEMAQALEAGILCFNVESEPELSALSQVATAMGRTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 I +RINP V + ++ G + V G+ H + Sbjct: 145 NISIRINPDVDAKTHAKISTGKSENKFGIPISRARTVYAEAATLPGLKVAGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + + + + LGGG+ + + Sbjct: 205 TDLGPFENATLLMAELARDLLAQGHALHHLDLGGGLGVPYVAGDPVPPSPDAYAAVITRA 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + + E G IV N L V+ + K VIVD+++ + L Sbjct: 265 LKGLDLPLVFEMGRMIVANAGILVARVIYVKHGEGKTFVIVDAAMNDLIRPTLYEAHHDI 324 Query: 281 IYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + P V G C GD + GD I+ Y + + +N Sbjct: 325 VPVHQRPSAPTAKVDVVGPVCETGDYLALDRELPELMPGDLIAVMTAGAYGAVQASTYNT 384 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYY--NNL 366 + + + + L Sbjct: 385 RPLIAEVLVSGHQAAVVRPRVEVEQLIGLDRL 416 >gi|187476584|ref|YP_784608.1| diaminopimelate decarboxylase [Bordetella avium 197N] gi|115421170|emb|CAJ47654.1| diaminopimelate decarboxylase [Bordetella avium 197N] Length = 429 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 120/388 (30%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + L D+ V + +K + + + G S Sbjct: 37 LGTPLYVYSRAALRAAYDSYRLAIGERPVLVCYGMKANSNLAVLKEFARMGAGFDIVSGG 96 Query: 62 EVMLGHE-KFGGETHAYNV-AYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ + E+ + + ++L++ AQ K Sbjct: 97 ELKRVLAVGGDPAKIVFSGVGKQAWEMREALEAGVKCFNVESTAELHRLSKVAQATGKVA 156 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 LR+NP V ++ G ++ + + V G+ H + Sbjct: 157 RVSLRVNPDVDAQTHPYISTGLKENKFGIAIEEALAAYQTAASLPGLQVVGVDCHIGSQL 216 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 + L ++ +IE + LGGG+ D L E + Sbjct: 217 TDISPYFDALDKLLDLIDRMAETGIRIEHLDLGGGLGIRYTDEVPPSPKALLDEVFNRLQ 276 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES- 278 + + LEPG ++V N L TTV + N +N IVD+++ + L Sbjct: 277 ARGYGHLHLVLEPGRSLVGNAGLLLTTVQFLKHNDARNFAIVDAAMNDLLRPTLYQAYHG 336 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + V G C +GD + ++ D ++ E Y + +N Sbjct: 337 VRPVVPRAGEARVYDVVGPVCESGDWLAKERALA-IEQDDVLALESAGAYGMVMAGNYNT 395 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + S +D Sbjct: 396 RARAAEVMVDGAQYHVVRQRESLDDLLR 423 >gi|85714907|ref|ZP_01045893.1| diaminopimelate decarboxylase [Nitrobacter sp. Nb-311A] gi|85698393|gb|EAQ36264.1| diaminopimelate decarboxylase [Nitrobacter sp. Nb-311A] Length = 421 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 53/390 (13%), Positives = 105/390 (26%), Gaps = 26/390 (6%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++ TP+Y L + + A+K + + T+ + G S Sbjct: 24 VVGTPFYCYSTATLERHYRVFAEAFAGTDHLVCYAVKANSNQSVLRTMAKLGAGADVVSG 83 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKK 117 E+ ++ K D I + +L+ A + + Sbjct: 84 GELKRALAAEIPANKILFSGVGKTEAELRAALAADVLCINVESEPELDLLSRLASETGRT 143 Query: 118 IGLRI--NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168 + + NP V R ++ G + V G+ H + Sbjct: 144 ARVSVRINPDVDSGAHAKISTGRLENKFGIPITQARAVYARAAKLPGIKVTGVDMHIGSQ 203 Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKE 220 + + + + GGG+ + + ++ Sbjct: 204 ITDLGPMETAFRLLADFVSTLRADGHVVSHVDFGGGLGIPYYEDRSAPPEPLAYADMVRR 263 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 + + EPG IV N L T V+ + N +N VI+D+++ + L Sbjct: 264 VTRNLDCTLMFEPGRMIVGNAGILVTRVIYVKHGNARNFVIIDAAMNDLIRPTLYEAYHQ 323 Query: 280 TIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + P A V G C GD + GD ++ Y + + Sbjct: 324 IMPVRAAPKDAAVMVADVVGPVCETGDYLALERNLPEPQAGDLLAIMTAGAYGAVQSGTY 383 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D Sbjct: 384 NTRALIPEVLVKGDQYAVVRPRIEVEQLIA 413 >gi|32266317|ref|NP_860349.1| carboxynorspermidine decarboxylase NspC [Helicobacter hepaticus ATCC 51449] gi|32262367|gb|AAP77415.1| carboxynorspermidine decarboxylase NspC [Helicobacter hepaticus ATCC 51449] Length = 411 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 126/397 (31%), Positives = 201/397 (50%), Gaps = 34/397 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+++++KL NL +++ +G K+LLALK +A W +F+ L + G+T+S LY Sbjct: 15 LPSPAYVLEEEKLNANLALLDSVQQRSGAKILLALKGYAFWRVFENLKCTLSGSTASGLY 74 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------ 110 E LG+E+ GG E ++ AYK E +++L+ IIFN+ Q +FK Sbjct: 75 EARLGYEEIGGANKGKEVCVFSPAYKKEEFESILNYATHIIFNSFYQWQRFKPLIESKNT 134 Query: 111 ----AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLM 162 + ++GLR+NP S + + +P SRLG + + + ++GL Sbjct: 135 MLKAHSQAPIEVGLRVNPLYSEVEPPIYNPCIAGSRLGITPNEFQKGVAQYGLDGISGLH 194 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE S L + EK FG +I +W++ GGG H T DY + +F Sbjct: 195 FHTHCEQDSAALSRT-LPHFEKHFGAYIQGKKWVNFGGGHHITRVDYDCDLLVNLICDFK 253 Query: 223 EKYSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 +Y LEPGEA+ L V+DI +N ++ I+D S AH+PD L ++ Sbjct: 254 RRYKDIEIFLEPGEAVGWQVGFLIGEVIDIVQNEISVAILDVSAAAHMPDCLEMPYRPSL 313 Query: 282 YP-------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 G Y + G +CLAGD+ G++ F+ P+ IGDR+ FED+ Y I Sbjct: 314 IKLSKQTGLESDKGEGKGAYAYRLGGPTCLAGDVIGDYSFDTPLCIGDRVIFEDMLHYTI 373 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + N FNG+ +P++ V + G K ++ F Y DY Sbjct: 374 VKNNTFNGVPLPSLGVIDTQGVWKLLKSFGYEDYKQR 410 >gi|325111253|ref|YP_004272321.1| diaminopimelate decarboxylase [Planctomyces brasiliensis DSM 5305] gi|324971521|gb|ADY62299.1| diaminopimelate decarboxylase [Planctomyces brasiliensis DSM 5305] Length = 429 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 54/395 (13%), Positives = 118/395 (29%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + K L + + ++K + + LN+ S E Sbjct: 30 GTPLWVYSEAKFLEEFRQLKKAFEACDPVICYSVKANSNLHVLKALNEAGSSFDVVSGGE 89 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + + K A+ N + ++L+ A+++ Sbjct: 90 LFRVLKAGADTTRVVFAGVGKTDAEIRLALEQNILMFNVESEAELDAIAAVAREMDVVAP 149 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP + + ++ G + + + G+ H Sbjct: 150 VALRLNPDIDAKTHKKTTTGKKGNKFGMDIERHNALADKVLTEPHLELRGIHMHLGSPIL 209 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + + K ++ + I W++LGGG + ++ + + + Sbjct: 210 TTDPYEQAAKKAVDVIADLRKKGHDISWVNLGGGFALSYRNDEAPDYSTYASVIVPHIQA 269 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYP 283 ++ LEPG +I+ N L + V+ VI D ++ + Sbjct: 270 AGCKLALEPGRSIIGNACVLVSQVIYTKREGGKLFVIQDGAMNDLARPAMYDAFHRVWPV 329 Query: 284 N--------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 G V G C + D F + P++ GD IS Y Sbjct: 330 QTDVPLPYDCEAAEIEGCEATDVVGPVCESSDYFAKDRALPPLQRGDLISTFSAGAYGSA 389 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + + + +Y+D Sbjct: 390 MSSNYNSRPRGAEVLVSGSEARLIRKRETYDDLIA 424 >gi|288817402|ref|YP_003431749.1| diaminopimelate decarboxylase [Hydrogenobacter thermophilus TK-6] gi|288786801|dbj|BAI68548.1| diaminopimelate decarboxylase [Hydrogenobacter thermophilus TK-6] gi|308751009|gb|ADO44492.1| diaminopimelate decarboxylase [Hydrogenobacter thermophilus TK-6] Length = 415 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 59/380 (15%), Positives = 111/380 (29%), Gaps = 25/380 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A+K + + G S E Sbjct: 31 GTPLYVYSASHIRDRVRAYREAF--PDALICYAVKANFNPSIIRVAREEGAGADIVSGGE 88 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + Y K + D + +L+ A+ L KKI Sbjct: 89 LYASLLAGVEPSRIVYAGVGKTLKELEYAIKSDILMFNVESRMELDVLNHLAESLGKKIR 148 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 + R+NP V S+ G K + V G+ H + Sbjct: 149 IAIRVNPDVDPKTHPYISTGMKKSKFGVDIKHAKQEYQYAGKLKNLEVVGIHCHIGSQIL 208 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFSE 223 + ++ ++ E +I ++ +GGG+ K + + + Sbjct: 209 DVSPYIEAVEKVVDLYHELVRSGFEIRYVDIGGGLGIKYKPDQSNPEPKDLAEAVMPALK 268 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG +IV N L T V + + K+ VIVD+ + + + + Sbjct: 269 GVDAKILLEPGRSIVGNAGLLITRVEFLKDKGHKHFVIVDAGMNDLIRPAMYDAYHHIVP 328 Query: 283 PNTGPYTA---MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G C GD + V+ GD ++ Y + +N Sbjct: 329 VVKRDTGYIKTDIVGPICETGDFLALDREIQKVERGDYLAVLSAGAYGFAMSSHYNVRPR 388 Query: 340 PTIAVKNVDGTIKAIREFSY 359 + +Y Sbjct: 389 ACEVLVEKQSYKIIRERETY 408 >gi|295706474|ref|YP_003599549.1| diaminopimelate decarboxylase [Bacillus megaterium DSM 319] gi|294804133|gb|ADF41199.1| diaminopimelate decarboxylase [Bacillus megaterium DSM 319] Length = 439 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 54/400 (13%), Positives = 127/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + GVK + A K F+ M +++ S Sbjct: 30 GTPLYVYDVALIRQRARGFKETFEKHGVKAQVAYASKAFSTIAMVQVVHEEGLSLDVVSG 89 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115 E+ F E ++ K + D I+ + ++ ++ + Sbjct: 90 GELYTALAADFPKERIHFHGNNKSRAELEMAIKEDVGCIVVDNFYEIALLQEITEQYQKK 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LR+ P + + S+ G E + S+ + G+ H Sbjct: 150 MPVLLRLTPGIEAHTHDYILTGQEDSKFGFDLQNGQADEAVRLVQNSKGLELLGIHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDF-------- 214 + F + + + + +I+++ +LGGG + Sbjct: 210 SQIFETTGFIMATQKLFAKMKEWKQRIKFVPQVLNLGGGFGIRYTEEDQPIPVSQYVEVI 269 Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + +K+ S++ +I++EPG ++V + T ++ +D + ++ Sbjct: 270 IEEVKKQSKQLEVEIPEIWIEPGRSLVGDAGTTLYSIGSRKHVPNVREYVAIDGGMNDNI 329 Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + + G+ C +GD+ D ++ Sbjct: 330 RPALYQAKYEAVIANRMNDESDELVSIAGKCCESGDMLMWDVQLPKANPDDLLAMFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + P + ++ +Y D N Sbjct: 390 YGYSMASHYNRLPKPAVVFVEDGEAQLVVKRETYEDIVKN 429 >gi|261250031|ref|ZP_05942608.1| diaminopimelate decarboxylase [Vibrio orientalis CIP 102891] gi|260939535|gb|EEX95520.1| diaminopimelate decarboxylase [Vibrio orientalis CIP 102891] Length = 417 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 56/378 (14%), Positives = 108/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWNAFDKSVGEHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGDAAKVVFSGVGKTEAEMKRALELGIKCFNVESEPELERLNKVAGELGVKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V + ++ G +V G+ H + Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYKFAQSLDNLDVRGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + + IE + +GGG+ +D + K + Sbjct: 207 DIEPFIDATDRLLALIDDLKAQGVTIEHLDVGGGLGVVYRDELPPQPSEYAKALLGRLEN 266 Query: 228 Q----IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 + EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I + G C GD G+ ++ D ++ Y + +N + Sbjct: 327 VIPREGEAVAYDLVGPICETGDFLGKDRALV-LEENDLLAVRSAGAYGFVMSSNYNTRSR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + Sbjct: 386 AAEVMVDGKQAHLVRQRE 403 >gi|59713092|ref|YP_205868.1| diaminopimelate decarboxylase, PLP-binding [Vibrio fischeri ES114] gi|59481193|gb|AAW86980.1| diaminopimelate decarboxylase, PLP-binding [Vibrio fischeri ES114] Length = 417 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 108/378 (28%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + N + A+K + G+ + L + G S E Sbjct: 27 GTPLYVYSRATLERHWKAFDNSVGNHPHLVCYAVKANSNIGVLNALARLGSGFDIVSQGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + ++ K D A+ + +L + A + Sbjct: 87 LERVVAAGGDPTKVVFSGVGKTADEMRRALELKIKCFNVESEPELERLNAVAAEMGVIAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LRINP V ++ G E +V G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDHAPEVYKFAQSLPNLDVQGIDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + I + +GGG+ P + L +E Sbjct: 207 DIEPFIDATDRLLALIDDLKAQGVNIRHLDVGGGLGVVYRDELPPQPSEYATALLGRLAE 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 HQDLELIFEPGRAIAANAGILVTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C GD G+ ++ D ++ Y + +N Sbjct: 327 VVPREGDAQNYDLVGPICETGDFLGKDRALV-LEANDLLAVRSSGAYGFVMSSNYNTRCR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + + Sbjct: 386 AAEIMVDGGDVHLVRKRE 403 >gi|33594517|ref|NP_882161.1| diaminopimelate decarboxylase [Bordetella pertussis Tohama I] gi|33564593|emb|CAE43910.1| diaminopimelate decarboxylase [Bordetella pertussis Tohama I] gi|332383928|gb|AEE68775.1| diaminopimelate decarboxylase [Bordetella pertussis CS] Length = 429 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 121/388 (31%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + L + +T V + +K + + + G S Sbjct: 37 LGTPLYVYSRAALRSAWETYRDAIGERPVLVCFGMKTNSNLAVLKEFARLGAGFDIVSGG 96 Query: 62 EVMLGHE-KFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ + E+ A L + ++L + D A + ++ Sbjct: 97 ELARVLAVGGDPAKVVFSGVGKQAWEMRAALEADVKCFNVESEAELERLSDVAVSMGRRA 156 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCEN 169 LR+NP V ++ G + + V G+ H + Sbjct: 157 RVSLRVNPDVDAQTHPYISTGLKENKFGIAIESAPAAYRLAARLPGVEVVGVDCHIGSQL 216 Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 + L+ ++ ++ I+ + LGGG+ D L E+ Sbjct: 217 TDISPYFDALEKLLDLIEQLAENGIAIKHLDLGGGLGIRYTDEIPPSPKALLDRVFERIN 276 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES- 278 + I LEPG ++ N L TTV + +N IVD+++ + L Sbjct: 277 ARGLGHLHIVLEPGRSLAGNAGVLLTTVQYLKHAEARNFAIVDAAMNDLLRPALYEAYHG 336 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 V G C + D ++ GD ++ E Y++ + +N Sbjct: 337 VQPVTPRADKRIEYDVVGPVCESADWLARGRALA-IQAGDVLAVESAGAYSMVMASNYNT 395 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + + Y Sbjct: 396 RVRAAEVMVDGNRHYIVRQRETLESLYQ 423 >gi|255036726|ref|YP_003087347.1| diaminopimelate decarboxylase [Dyadobacter fermentans DSM 18053] gi|254949482|gb|ACT94182.1| diaminopimelate decarboxylase [Dyadobacter fermentans DSM 18053] Length = 409 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 63/384 (16%), Positives = 119/384 (30%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ D + Y +K+ A K + + + S E Sbjct: 24 GSPLYVYDGATIRRKAAELQYAFAGVNMKIKFACKANTNLAILRLMREIGVELDVVSPGE 83 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + +G + + + D E + + +++ L F + + Sbjct: 84 LEMGKIAGYDASQITFTPSGVDFEEVREAVETGAIVNVDSLPLLEWFGQTYGNSKPCM-I 142 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFLC 174 RI P+V+ S+ G + + I+ V GL H + K Sbjct: 143 RIKPNVAAGGHTKIMTAHADSKFGISVLLLDEILEMIKKYDIKVIGLHQHTGSDIKDAEP 202 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI----- 229 F + +I E ++ I LGGG + L + K Sbjct: 203 FLK-VADILLETAKHFPDLQIIDLGGGFKVSYLPGDAITDMDLLGKKISKRFRTFCEEYG 261 Query: 230 -----YLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283 + EPG+ +V+ + L T + E+ +N V VDS + + + + Sbjct: 262 RDLQLWFEPGKFLVSESGFLFVTTNVVKEDPARNFVHVDSGLNHLIRPMMYGSYHHILNI 321 Query: 284 NT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + P V G C D F V+ GD ++F + Y + + +N P Sbjct: 322 SNPKGEPKHYNVVGYICET-DTFATDRELPEVRQGDVLAFLNAGAYGLTMSSNYNARFRP 380 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + R + D Sbjct: 381 AEVLIDNGEAKLVRRRETMEDLLR 404 >gi|261867422|ref|YP_003255344.1| diaminopimelate decarboxylase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412754|gb|ACX82125.1| diaminopimelate decarboxylase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 416 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 117/389 (30%), Gaps = 25/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L ++ N + A+K + + + + G S E Sbjct: 26 GTPLYVYSKAALEHHWYAFENAFGNHPHLVCFAVKSNPNIAILNIMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K A + ++L + A Sbjct: 86 LERVLAAGGEAHKVVFSGVAKSRREIARALEVGIRCFNIESEAELLRINQVAGDIGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVEQAREVYKLATTLPNIEIVGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + + Q++ + LGGG+ T +P + ++ S Sbjct: 206 ELQPFLDAADRLIMLMEQLKQDSIQLKHLDLGGGLGVTYTDETPPHPTEYAKALWEKLSA 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I +EPG AI N L T V + +N IVD+ + + L + Sbjct: 266 FNELEIIVEPGRAITANAGILVTKVEYLKSNESRNFAIVDAGMNDMIRPALYQAYMNILE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD ++ Y + + +N Sbjct: 326 IDRTLAREEKIYDVVGPICETSDFLGKQRKLA-IAEGDYLAQRSAGAYGASMSSNYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + D R + N+ + S Sbjct: 385 RTAEVMVDGDNAYLIRRREALNELWRLES 413 >gi|150020935|ref|YP_001306289.1| diaminopimelate decarboxylase [Thermosipho melanesiensis BI429] gi|149793456|gb|ABR30904.1| diaminopimelate decarboxylase [Thermosipho melanesiensis BI429] Length = 382 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 64/373 (17%), Positives = 123/373 (32%), Gaps = 14/373 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+YL ++ L+ + + K A + A+K + + + G E Sbjct: 9 ETPFYLYFEKTLIERISMVKDVFKEANIFPTFAVKANNNPHLLKIIAKNGFGMDILGEGE 68 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + GE +N K + V+ + + ++ + + + + Sbjct: 69 LHACKLANIPGEKIIWNGNGKTEKQKKVMKEYGVNYVNIDSKEEFDLLWK--TEESFNLF 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-VNGLMFHNNCENKSFLCFSAM 178 LR+NP + + G + + GL H + F Sbjct: 127 LRVNPDIDAKTHPYISTGLKSHKFGVSFNVAKDILKSGKITGLHLHIGSQITDVEPFKEA 186 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK--EFSEKYSVQIYLEPGEA 236 ++ + + I+ I++GGG + + D + K + E G Sbjct: 187 IEKTLELAKKY--NIKHINIGGGWGISYNEEKELDLEKYKKEVIPFLSEFDMVINEIGRF 244 Query: 237 IVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY--TAMVC 293 I+ L T V+ + K V+V+S + + L N A + Sbjct: 245 IIAPAGVLVTKVILVKETENKTFVVVESGMNHLIRPALYNAYHEIEVLNNSLEYIKADIV 304 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G C GD + K V D + ++ Y + N +NG P + VDG Sbjct: 305 GPLCETGDFLAKDRKIKKVNTNDILIIKNTGAYGYSMSNNYNGTTRPAEVLVTVDGKDIL 364 Query: 354 IRE-FSYNDYYNN 365 IR + +D + N Sbjct: 365 IRRKETIDDLFRN 377 >gi|217979913|ref|YP_002364060.1| diaminopimelate decarboxylase [Methylocella silvestris BL2] gi|217505289|gb|ACK52698.1| diaminopimelate decarboxylase [Methylocella silvestris BL2] Length = 422 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 65/388 (16%), Positives = 113/388 (29%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSSATLSRHYRVFKSALEGIDSLVCYAVKANSNQAVLTTLARLGAGMDVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF----KDKAQKLHK 116 E+ ++ K + A FN S+ A Sbjct: 85 ELRRALAAGAPASQITFSGVGKTKQEMAFALKAGIFCFNVESEPELLALSEVASAIGSTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169 +I +R+NP V + ++ G E V+G+ H + Sbjct: 145 RIAIRVNPDVDAKTHAKISTGKSENKFGVPISRAREVYAEAGRLPNIKVSGVDLHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKE 220 F A K I+ + +GGG+ Y + + L+ Sbjct: 205 TDLEPFDASFKLAAGFVATLRADGHDIDHVDVGGGLGIPYREGDDPASYHPDRYARILRA 264 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 +I EPG IV N L T VL + K VIVD+++ + L Sbjct: 265 RLGPLECRIVCEPGRLIVGNAGILVTRVLYLKRGEAKTFVIVDAAMNDLIRPTLYDAYHE 324 Query: 280 TI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + A V G C GD + GD ++ Y + + +N Sbjct: 325 IRPVRPRADAPEILADVVGPVCETGDYLALGRKMAAPQPGDLLAIMSAGAYGATQSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + N +Y++ Sbjct: 385 SRLLIPEVLVNGAAYAVVRPRPAYDELI 412 >gi|319761552|ref|YP_004125489.1| diaminopimelate decarboxylase [Alicycliphilus denitrificans BC] gi|330823421|ref|YP_004386724.1| diaminopimelate decarboxylase [Alicycliphilus denitrificans K601] gi|317116113|gb|ADU98601.1| diaminopimelate decarboxylase [Alicycliphilus denitrificans BC] gi|329308793|gb|AEB83208.1| diaminopimelate decarboxylase [Alicycliphilus denitrificans K601] Length = 429 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 114/388 (29%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + +L L V++ A+K ++ + Q+ G S E Sbjct: 34 GTPLYVYSQASMLQALAAYQRGFAGRRVQICYAMKANSSLAVLQLFAQHGCGFDIVSGGE 93 Query: 63 VMLGHE--KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + V + A+ + + ++L + AQ + Sbjct: 94 LERVMAAGGDPAKVIFSGVGKTRAEMRQALEAGIGCFNVESEAELEVLSEVAQSMGLRAP 153 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCENK 170 I +R+NP+V ++ G + + V G+ H + Sbjct: 154 ISIRVNPNVDAKTHPYISTGLKGNKFGIAHERTLDTYRRAAQLPGLRVVGIDCHIGSQIT 213 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + ++ + I I GGG+ K Sbjct: 214 EETPYLDAMDRLLDLVQAIEAAGIAIHHIDFGGGLGIDYNGDTPPAADALWSSLLAKLDA 273 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESAT 280 + +EPG ++V N T VL + + VD+++ + A Sbjct: 274 RGYGDRLLMIEPGRSLVGNAGVCLTQVLYLKPGEQKNFCVVDAAMNDLPRPAMYQAYHAI 333 Query: 281 IYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + V G C +GD G+ V GD ++ Y + + +N Sbjct: 334 VPLDAAAKAPEQVYDVVGPICESGDWLGKDRSLA-VAAGDMLAVLSTGAYCSSMGSTYNT 392 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 P + + +D + Sbjct: 393 RARPAEVLVDGAQAHLIRAREGISDIFR 420 >gi|150397736|ref|YP_001328203.1| diaminopimelate decarboxylase [Sinorhizobium medicae WSM419] gi|150029251|gb|ABR61368.1| diaminopimelate decarboxylase [Sinorhizobium medicae WSM419] Length = 422 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 60/388 (15%), Positives = 109/388 (28%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHYKVFSQAFADVDAMVCYAMKANSNQAVLKTLGRLGAGLDVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ K A+ + + +L + + Sbjct: 85 ELRRALAAGIPPSRIMFSGVGKTAREMDFALEAGIYCFNVESEPELEVLNQRGVRAGKRA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + RINP V + ++ G + V G+ H + Sbjct: 145 PVSFRINPDVDARTHAKISTGKKENKFGISWERARSVYAHAATLPGIEVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F K + IE + LGGG+ ++ + +K Sbjct: 205 TELQPFDDAFKLLRELVDTLRSDGHVIEHVDLGGGLGIPYREDNNPPPLPDAYADVVKNQ 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + +I EPG IV N L T V+ + + K VIVD ++ + L Sbjct: 265 LKGLDCKIVTEPGRLIVGNAGILVTEVVYVKDGGDKTFVIVDGAMNDLIRPTLYEAYHEI 324 Query: 281 IYPN-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 A V G C GD + GD ++ Y + +N Sbjct: 325 RPVRISAASAPRIKADVVGPVCETGDYLALDREMAMPRAGDLLAIGSAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + D Y++ Sbjct: 385 SRLLVPEVLVKGDRFHVIRPRKDYDELI 412 >gi|33151309|ref|NP_872662.1| diaminopimelate decarboxylase [Haemophilus ducreyi 35000HP] gi|33147529|gb|AAP95051.1| diaminopimelate decarboxylase [Haemophilus ducreyi 35000HP] Length = 417 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 57/387 (14%), Positives = 115/387 (29%), Gaps = 25/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + + G S E Sbjct: 26 GTPAYIYSRATLEQHWRAFDEAFGDRPHLICFAVKSNPNLAVLNVMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ +V++L++ A +L K Sbjct: 86 LERVLAAGGDPAKIVFSGVAKSHIEIRRALAVGIHCFNVESVAELHRINQIAGELGKIAT 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + V GL H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGISVQQARAVYQLASRLPHIQVVGLDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + ++ + LGGG+ + ++ K++ Sbjct: 206 ELQPFLDAADRLIVLLEQLYRDGIRLSHLDLGGGLGVVYHTETPPQPAEYVRALLAKFAH 265 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG AI + L T V + ++ IVD+ + + L Sbjct: 266 YPELEIILEPGRAITADAGILVTKVEYLKSNEDRHFAIVDTGMNDLLRPALYDAYMHISE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD ++ Y + + +N Sbjct: 326 VDQSLKRVEQQYEVVGPICETADFLGKARTLA-IAEGDLLAVYSAGAYGASMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + + + + + N Sbjct: 385 QAVEIMVDGATSHLIKKRSDFAELWRN 411 >gi|306842881|ref|ZP_07475518.1| diaminopimelate decarboxylase [Brucella sp. BO2] gi|306286968|gb|EFM58485.1| diaminopimelate decarboxylase [Brucella sp. BO2] Length = 421 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + + ALK + + L + G + S Sbjct: 25 VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K A+ + + +L + A Sbjct: 85 EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G + + NV G+ H + Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + KE I + +GGG+ P + + + + Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAEIVAKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + ++ EPG IV N L T V+ + E + KN VIVD+++ + L Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A G C GD G GD I+ Y + +N Sbjct: 325 RPVIVPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y + Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413 >gi|126730019|ref|ZP_01745831.1| diaminopimelate decarboxylase [Sagittula stellata E-37] gi|126709399|gb|EBA08453.1| diaminopimelate decarboxylase [Sagittula stellata E-37] Length = 426 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 118/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP+YL L+ + + A+K + + L G S Sbjct: 30 VETPFYLYSHATLVRHFRLFDEALAWGPHMVCYAVKAASNQAILTALAAEGAGMDVVSGG 89 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E G ++ K A+ + ++ + A + Sbjct: 90 EYARAKAAGVPGARIVFSGVGKTRSEIRAALDGGIRQFNVESEPEMQVISEVATSMGVVA 149 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I +R+NP V + ++ G E + V G+ H + Sbjct: 150 PIAVRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYAEAAALPGLKVVGIDVHIGSQL 209 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F + + + IE + LGGG+ D+ ++ Sbjct: 210 TQLEPFEMAYRKVAELTEVLRAEGHAIERLDLGGGLGIPYARSNEAPPLPTDYGAMVQRT 269 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 V++ +EPG I N L + V+ + ++ +I+D+++ + + Sbjct: 270 VGHLGVEVEIEPGRLIAGNAGILVSRVIYVKNGEGRDFLILDAAMNDLIRPAMYDAYHDI 329 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C GD F + P+ GD ++F Y + +N Sbjct: 330 VPVAEAEPGIEQVAYDVVGPVCETGDTFAKGRVMPPLAAGDLVAFRSAGAYGAVMSSEYN 389 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + D S++D N Sbjct: 390 TRPLVPEIMAKNDQFAVIRARPSFDDMINR 419 >gi|52426139|ref|YP_089276.1| LysA protein [Mannheimia succiniciproducens MBEL55E] gi|52308191|gb|AAU38691.1| LysA protein [Mannheimia succiniciproducens MBEL55E] Length = 416 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 65/378 (17%), Positives = 123/378 (32%), Gaps = 25/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + G S E Sbjct: 26 GTPLYIYSRATLERHWKAFDSALGDHPHLVCFAVKSNPNIAILQVMAKLGAGFDIVSQGE 85 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK--LHKK 117 + + ++ K+ + A D ++++L + + A K Sbjct: 86 LERVIAAGGDPHKVVFSGVAKNEKEIARALELDIRCFNVESLAELQRINEVAGKSGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167 I LR+NP V ++ G + E V G+ H Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYRLASRLPNIKVTGMDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 E + FL + L + ++ ++E + LGGG+ T +P + L + + Sbjct: 206 EIQPFLDATDRLILLLEQLREDGIELEHLDLGGGLGVTYSDETPPHPSEYATALLNKLKQ 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282 +++I +EPG AI N+ L T V + N + IVD+ + + L I Sbjct: 266 YTNLEIIMEPGRAISANSGILVTKVEYLKSNETHNFAIVDAGMNDMIRPALYQAYMNIIE 325 Query: 283 P----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 N V G C D G+ + GD + Y + + +N Sbjct: 326 ADRTLNRESKIYDVVGPICETSDFLGKQRRLA-IAPGDYLVQRSAGAYGASMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIRE 356 + + + R Sbjct: 385 LTAEVMVDGSQAHLIRRR 402 >gi|169831365|ref|YP_001717347.1| diaminopimelate decarboxylase [Candidatus Desulforudis audaxviator MP104C] gi|169638209|gb|ACA59715.1| diaminopimelate decarboxylase [Candidatus Desulforudis audaxviator MP104C] Length = 440 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 121/399 (30%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ N G +L A K + + + G S E Sbjct: 30 GTPLYVLDEALFRENCRLYRVAFARGGGGVLYAGKALLTLAVCRLVEEEGLGLDVVSGGE 89 Query: 63 VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + F + ++ K D A+ + + ++ +L+ A +L Sbjct: 90 LYTAVQAGFPMDRVYFHGNNKTADEVRMALSAGVHRFVCDSFDELDLLSRLALELGKECN 149 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + LR+ P + + S+ G E + +E + GL H + Sbjct: 150 LLLRLTPGIEAHTHDYIRTGQIDSKFGLAIPNGQALEAVRRCLERPALKLRGLHCHIGSQ 209 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 + +++ + IE + LGGG+ + L E Sbjct: 210 IFELEPYADAARILMEFARQVRDVTGWVIEELDLGGGLGIYYSPGDDPPAVETLAETIFG 269 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 ++ +EPG +I T TV + E V + + Sbjct: 270 AVAQAAASEGLPIPKVLVEPGRSIAGPAGTTLYTVGTVKEIPGVRTYVAVDGGMGDNPRP 329 Query: 272 YLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L N + GR C +GD+ PV++GD ++ Y Sbjct: 330 ALYGARYEACLANRMNGRLDTLAVSLAGRCCESGDLLIRQADLPPVRVGDVVAVSCTGAY 389 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N P + + +R SY D N Sbjct: 390 TYSMASNYNRFPRPAMVLVRDGSAELIVRRESYADLIRN 428 >gi|257453688|ref|ZP_05618975.1| diaminopimelate decarboxylase [Enhydrobacter aerosaccus SK60] gi|257448922|gb|EEV23878.1| diaminopimelate decarboxylase [Enhydrobacter aerosaccus SK60] Length = 435 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 69/386 (17%), Positives = 122/386 (31%), Gaps = 24/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ +Q +L ++ A+K + + + L + G + E Sbjct: 46 GTPTYVYSQQAILAAYKAYDDSFAEIEHQICYAVKANSNLAVLNALAKAGAGFDIVTGGE 105 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-- 117 + + ++ K E A+ + ++L + A KL ++ Sbjct: 106 LARVLAAGGDPKKIVFSGLGKTAEDIRSALEVGIACFNVESEAELYRINAVAGKLQQQAP 165 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP+V ++ G +D V G+ H + Sbjct: 166 ISLRVNPNVDAQTHPYISTGLKENKFGITHEDAPRIYQIAHDLPHLKVVGIDCHIGSQLT 225 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 F L + +E I LGGG+ D ++ F Q L + Sbjct: 226 QVQPFMDALDKVIEMIHALAKQGIALEHIDLGGGLGVQYIDEDVASIQQFAQLLLPKLKT 285 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + +YLEPG +IV N L T V + KN IVD+++ + L E A I Sbjct: 286 LGLTLYLEPGRSIVANAGVLLTRVDILKPTEHKNFAIVDAAMNDLIRPALYQSEMAVIPT 345 Query: 284 N----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P + G C GD + + D ++ Y + +N Sbjct: 346 QLNSPVEPKVWDIVGAICETGDFLAKNRVLA-LADNDILAITGAGAYGFVMSSNYNSRPR 404 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + N Sbjct: 405 ACEVLVKDGHAHVIRERETVESLWQN 430 >gi|209693748|ref|YP_002261676.1| diaminopimelate decarboxylase [Aliivibrio salmonicida LFI1238] gi|208007699|emb|CAQ77810.1| diaminopimelate decarboxylase [Aliivibrio salmonicida LFI1238] Length = 417 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 114/378 (30%), Gaps = 24/378 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + G+ + L G S E Sbjct: 27 GTPLYVYSRATLERHWNAFDSSVGEQPHLVCYAVKANSNIGVLNALACLGSGFDIVSQGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ N + +L + A+++ Sbjct: 87 LERVVAAGGDPTKVVFSGVGKTAKEMRRALELNIKCFNVESEPELERLNAVAEEMGVIAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE-- 168 I LRINP V ++ G E N+ G+ H + Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPEVYKFAQTLPNLNIQGIDCHIGSQLT 206 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F+ + L + + I + +GGG+ P + L + Sbjct: 207 DITPFIDATDRLLALIDDLKAQGVNIRHLDVGGGLGVVYRDELPPQPSEYATALLSRLTG 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279 + +++ EPG AI N L T V + I+D+++ + L Sbjct: 267 REDLELIFEPGRAIAANAGILVTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + + G C GD G+ ++ D ++ Y + +N Sbjct: 327 VVPREGEAQSYDLVGPICETGDFLGKDRDLV-LEANDLLAVRSSGAYGFVMSSNYNTRTR 385 Query: 340 PTIAVKNVDGTIKAIREF 357 + + D + Sbjct: 386 AAEIMVDGDQVHLVRKRE 403 >gi|256370385|ref|YP_003107896.1| diaminopimelate decarboxylase [Brucella microti CCM 4915] gi|256000548|gb|ACU48947.1| diaminopimelate decarboxylase [Brucella microti CCM 4915] Length = 421 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + + ALK + + L + G + S Sbjct: 25 VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSHG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K A+ + + +L + A Sbjct: 85 EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G + + NV G+ H + Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + KE I + +GGG+ P + Q + + Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + ++ EPG IV N L T V+ + E + KN VIVD+++ + L Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A G C GD G GD I+ Y + +N Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y + Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413 >gi|257459021|ref|ZP_05624140.1| diaminopimelate decarboxylase [Campylobacter gracilis RM3268] gi|257443406|gb|EEV18530.1| diaminopimelate decarboxylase [Campylobacter gracilis RM3268] Length = 437 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 64/421 (15%), Positives = 123/421 (29%), Gaps = 59/421 (14%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D ++ N + + A+K + + L+ G S+ E Sbjct: 11 GTPLYVYDFNEIQKNFIALKEVFAARKSLVCFAIKANSNLSVLKFLSDLGSGFDCVSIGE 70 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K D I + +++ + + AQKL+K Sbjct: 71 LRRALYVGAKSYKIIFSGVGKQDGELEFALKSDILLINLESEAEMLRLERIAQKLNKPAR 130 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE-- 168 +R+NP+V ++ G + + I N G+ FH + Sbjct: 131 ISIRVNPNVDAKTHPYISTGLNENKFGVNIETARKMYIYAKKSKFLNPVGIHFHIGSQLT 190 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + ++ ++ +E I++ +GGGI +D D+ Q + + Sbjct: 191 DISPICDAAKIVSDLLRELRALEIDIKFFDVGGGIGIRYEDEKQIVLYDYAQGILKSLSG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 V I EPG I T VL K VIVD ++ + L A Sbjct: 251 LDVTIVCEPGRFIAGAAGVFLTRVLYEKQNCGKRFVIVDGAMNDLIRPSLYGAHHAIEII 310 Query: 284 NTGP----------------------------------------YTAMVCGRSCLAGDIF 303 V G C +GD Sbjct: 311 GASEGINLNEPDASEVNLGSRGEDQTSGSDADQKNLGGVNLAETSLCDVVGPICESGDFL 370 Query: 304 GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 + ++ GD ++ + Y + + +N + S+++ Sbjct: 371 AKGVSLPSLQSGDLLAIKSAGAYGFSMSSNYNTRCRAAEVAVYDGQDRLIRKRESFDELI 430 Query: 364 N 364 Sbjct: 431 A 431 >gi|325123129|gb|ADY82652.1| diaminopimelate decarboxylase [Acinetobacter calcoaceticus PHEA-2] Length = 415 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 65/389 (16%), Positives = 123/389 (31%), Gaps = 27/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K N ++ A+K + + + L + G S E Sbjct: 25 GTPLYVYSKAAFEKNYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLG-GFDIVSGGE 83 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K + N + ++L++ + A +L Sbjct: 84 LARVLKAGGDASKVVFSGLGKTEADIEISLNVGIACFNVESYAELDRLQKVAARLGKKAP 143 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167 I LR+NP V ++ G + G+ H Sbjct: 144 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYETYQYAASLPNLEIIGIDCHIGSQLT 203 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 E K F+ + + +E ++ I +GGG+ KD ++ +K EK Sbjct: 204 ETKPFVDALDRVMLMIEELKKLGITLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 263 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279 +++Y+EPG +I N L T V L + +N I+D+++ + L Sbjct: 264 LGLKVYMEPGRSISANAGVLLTKVDLLKPTSHRNFAIIDAAMNDLIRPALYEAWMDIQPV 323 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 +T T + G C GD G+ +K D ++ Y + +N Sbjct: 324 VPSSDTEEKTWDLVGAICETGDFIGKDRSLA-LKENDLLAVLGAGAYGFVMSSNYNTRGR 382 Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366 + + D + L Sbjct: 383 AAEVMVSGDKAHLIRERETVESLWEKERL 411 >gi|312622915|ref|YP_004024528.1| diaminopimelate decarboxylase [Caldicellulosiruptor kronotskyensis 2002] gi|312203382|gb|ADQ46709.1| diaminopimelate decarboxylase [Caldicellulosiruptor kronotskyensis 2002] Length = 433 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 61/402 (15%), Positives = 124/402 (30%), Gaps = 37/402 (9%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 M TP Y++++ + N++ ++ A K F M + G Sbjct: 28 MYGTPLYVMNETMIRENINIFKSSLNKYFGENGLIIYASKAFCTKAMCQIAKEEGIGLDV 87 Query: 58 SSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E+ F + ++ K + + + I+ + +L + + Sbjct: 88 VSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVEKGVKIVLDNFDELEMLSLICRTKN 147 Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164 K + +RI P + + S+ G ++ ++ E N+ GL H Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSIVQKVLQKEELNLVGLHCH 207 Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 + F ML+ + K +I+ + LGGG + ++ E Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKIKNELGYEIKILDLGGGFGIKYTAHDEPPRVEKFIE 267 Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263 + I LEPG +IV T+ ++ E + Sbjct: 268 VITEEVEEFCSLKGLKKPFIVLEPGRSIVGEAGITLYTIGNVKEIPNVRNYVSVDGGMTD 327 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + + + GR C +GDI + +K G ++ Sbjct: 328 NPRYALYQARYDAYVVENPLGQRTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N P + + ++ +Y D N Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQARVIVKRETYEDLVRN 429 >gi|254292613|ref|YP_003058636.1| diaminopimelate decarboxylase [Hirschia baltica ATCC 49814] gi|254041144|gb|ACT57939.1| diaminopimelate decarboxylase [Hirschia baltica ATCC 49814] Length = 421 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 63/388 (16%), Positives = 117/388 (30%), Gaps = 25/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ L + + + + + ++K G+ TL + G S Sbjct: 25 VGTPTYVYSTATLERHYNVLAEAFEGSKYLIAYSVKACGNIGVIATLAKLGAGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 E+ E ++ K N + ++ + + A L K Sbjct: 85 ELAKALHAGIPAEKIVFSGVGKTHAELTAALNAGIHQFNVESFPEMERLNEIAIGLGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169 I R+NP V + G + + E N G+ H + Sbjct: 145 PIAFRVNPHVDAGGHANISTGGAEHKFGIAWHEAADMYAKAAAMEGINPIGVDVHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEFS 222 + + +E +I+ + LGGG+ D + Q ++E Sbjct: 205 MDIEPMRIAFEKVVALVRELRAQGIEIKRMDLGGGLGIPYAPEDNPDSPAKYAQMIREVK 264 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI 281 + V++ LEPG I N + V + E ++ D+ + L Sbjct: 265 QGVDVELILEPGRMIAGNAGVMLANVEYVKERDGRTFVILDAGMNDLARPALYDSIHEVQ 324 Query: 282 YPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + G C D F + P+K D+I+F Y + +N Sbjct: 325 PLIEPASDAPIAPVDLVGPVCETTDRFQKARPMHPLKQDDKIAFMSAGAYGAVLSSQYNA 384 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + N D SY+D Sbjct: 385 RPLAAEVLVNGDSFSVIRPRPSYDDIIA 412 >gi|323497704|ref|ZP_08102719.1| carboxynorspermidine decarboxylase [Vibrio sinaloensis DSM 21326] gi|323317180|gb|EGA70176.1| carboxynorspermidine decarboxylase [Vibrio sinaloensis DSM 21326] Length = 379 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 170/368 (46%), Positives = 244/368 (66%), Gaps = 3/368 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 8 LKTPYFMINEDKLIENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LGHE FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ + IGLR Sbjct: 68 EVKLGHETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIIEGKA-SIGLR 126 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VSY+ LA+P R FSRLG + ++G+MFH NCENK F +L + Sbjct: 127 LNPGVSYAGQDLANPARQFSRLGVQADHIDAEVFDEIDGVMFHMNCENKDVDAFIGLLDS 186 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++FG ++ +++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T T Sbjct: 187 ISEQFGEYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 246 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+D+ EN+K IVDS+ EAH D L+Y E A+I G + ++ SCLA Sbjct: 247 TDLVVTVVDVVENVKKTAIVDSATEAHRLDTLIYDEPASILEASEEGEHEYVIGSCSCLA 306 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F E FE+P+KIG R+ D AGY + + NWFNG+ MP++ + +G I+ + EF Y Sbjct: 307 GDQFCEAKFEQPIKIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSNGEIQKLNEFDY 366 Query: 360 NDYYNNLS 367 +D+ +LS Sbjct: 367 SDFKRSLS 374 >gi|148244272|ref|YP_001218966.1| diaminopimelate decarboxylase [Candidatus Vesicomyosocius okutanii HA] gi|146326099|dbj|BAF61242.1| diaminopimelate decarboxylase [Candidatus Vesicomyosocius okutanii HA] Length = 413 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 111/384 (28%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ + + N + + A+K + + L + G S E Sbjct: 25 GSPLYVYSRTDIEYNWHLFSHAFGIHPHLVCYAVKANSNLAVLSVLAKIGSGFDVVSNGE 84 Query: 63 VMLG-HEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K A+ +++++ + + A + Sbjct: 85 LERILLAGADASRCVFSGVAKTNIEIKRALEVGIFCFNVESMAEMIRIEQVAKEMSMQAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 I LR+NP V ++ G D I S V G+ H + Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGVDIDDAIPIYKMAYNSPYLKVKGIDCHIGSQLT 204 Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F L + + + + LGGG+ + D + +K Sbjct: 205 KISPFLDALDKVLELVAKLGKLNIHVTHLDLGGGVGIKYDNEQTIDINAYISSILDKVGS 264 Query: 228 -QIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPNT 285 +I LEPG AIV N T V + +N I+D ++ + + + Sbjct: 265 LKIILEPGRAIVGNAGIFVTKVEFLKQNSDKSFAIIDGAMNDLLRPSFYQAYHQVLPIDE 324 Query: 286 GPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + G C GD + + GD ++ Y + +N Sbjct: 325 NAEGIDAHWDLVGPICETGDFLAKNRRLS-LSEGDYLALMSAGAYGSTMSSNYNSRPRVA 383 Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365 + + D +N Sbjct: 384 EVMVLGSQYTLVRERETIQDLFNK 407 >gi|219871605|ref|YP_002475980.1| diaminopimelate decarboxylase [Haemophilus parasuis SH0165] gi|219691809|gb|ACL33032.1| diaminopimelate decarboxylase [Haemophilus parasuis SH0165] Length = 419 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 68/386 (17%), Positives = 121/386 (31%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDKAFGDHPHLICFAVKSNSNLALLNVMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A +VS+L + + A +L K Sbjct: 86 LERVLAAGGDASKVVFSGVAKTHREIARALEVGIRCFNVESVSELKRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G K+ E + G+ H + Sbjct: 146 ISLRVNPDVDAKTHPYISTGLKENKFGVSVKEAREVYRFATTLPHVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P++ L + Sbjct: 206 ELQPFLDATDRVIVLMEQLKQDGIELHHLDLGGGLGVTYTDETPPHPMEYAAALLNKLRA 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282 +++I LEPG AI N L T V I +N IVD+ + + L I Sbjct: 266 YPNLEIILEPGRAITANAGILVTKVEYIKQNEDRRFAIVDTGMNDMIRPALYEAYMQIIE 325 Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 N V G C D G+ + GD I+ Y + +N Sbjct: 326 VNQSLVREKAIYDVVGPICETSDFLGKQRELA-IAEGDLIAMRSAGAYGATMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D S+ D + Sbjct: 385 QAIEVMVDGDKAHLIKARASFEDLWR 410 >gi|125973201|ref|YP_001037111.1| diaminopimelate decarboxylase [Clostridium thermocellum ATCC 27405] gi|256004005|ref|ZP_05428991.1| diaminopimelate decarboxylase [Clostridium thermocellum DSM 2360] gi|281417400|ref|ZP_06248420.1| diaminopimelate decarboxylase [Clostridium thermocellum JW20] gi|125713426|gb|ABN51918.1| diaminopimelate decarboxylase [Clostridium thermocellum ATCC 27405] gi|255992133|gb|EEU02229.1| diaminopimelate decarboxylase [Clostridium thermocellum DSM 2360] gi|281408802|gb|EFB39060.1| diaminopimelate decarboxylase [Clostridium thermocellum JW20] gi|316940568|gb|ADU74602.1| diaminopimelate decarboxylase [Clostridium thermocellum DSM 1313] Length = 437 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 65/401 (16%), Positives = 122/401 (30%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ + N +L A K F M + Q G S Sbjct: 30 GTPLYVMDESLIRENCRIYKNALDKYYNGNGLVLYASKAFCTMAMCKIVQQEGLGLDVVS 89 Query: 60 LYEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ F E ++ K D A+ +N I+ + +L A + K Sbjct: 90 GGELYTAIKAGFPMEKVYFHGNNKTIDELELAIDNNVRRIVVDNRQELLHVNRIAAEKGK 149 Query: 117 KIGL--RINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHN 165 + + RI P + + S+ G + + ++ V GL H Sbjct: 150 TVNISFRIKPGIDAHTHDFIRTGQIDSKFGVALENGEAMEIIGEAVKLSNVKVVGLHCHI 209 Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDF------- 214 + F + + ++ +LGGG Sbjct: 210 GSQIFELAPFEEAARVMLTFIAKIKEELGIEIEELNLGGGFGIKYTQDDDPIEYDRYIKS 269 Query: 215 -CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 + +K E I +EPG +IV + + I + + + + Sbjct: 270 VSEVVKSVCEDKGIKLPFIVIEPGRSIVASAGITLYRIGTIKDIKGVRKYIAVDGGMTDN 329 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 L + + N + G+ C +GD+ G+ + GD ++ Sbjct: 330 PRYALYQSKYEGVIANKADAAKTEKVTIAGKCCESGDLLGKDVLLPEAEEGDILAILATG 389 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P + + ++ YND N Sbjct: 390 AYNYSMSSNYNRIPRPAVVLVKDGKARVIVKREDYNDIIRN 430 >gi|75674910|ref|YP_317331.1| diaminopimelate decarboxylase [Nitrobacter winogradskyi Nb-255] gi|74419780|gb|ABA03979.1| diaminopimelate decarboxylase [Nitrobacter winogradskyi Nb-255] Length = 421 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 55/389 (14%), Positives = 110/389 (28%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + T+ + G S Sbjct: 25 VGTPFYCYSTATLERHYRVFAEAFAGTDHLICYAVKANSNQSVLRTMARLGAGADVVSGG 84 Query: 62 EVMLGHEK-FGGETHAYNV-AYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ + E+ A L+ I + +L+ A + + Sbjct: 85 ELKRALAANIPASKILFSGVGKTESELRAALAADVLCINVESEPELDLLSRVAVETGRTA 144 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + R+NP V R ++ G + V G H + Sbjct: 145 RISVRVNPDVDSGTHAKISTGRLENKFGIPITQARAVYARAAKLPGIKVTGADMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 + + I + GGG+ + + + ++ Sbjct: 205 TDLGPMETAFRLLADFVGTLRADGHVISHVDFGGGLGIPYYEDRSAPPEPLAYAEMVRRV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + EPG IV N L T V+ + N +N VI+D+++ + L Sbjct: 265 TRDLDCTLMFEPGRMIVGNAGVLVTRVIYVKHGNARNFVIIDAAMNDLIRPTLYEAYHQI 324 Query: 281 IYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P A V G C GD + GD ++ Y + +N Sbjct: 325 MPVRAAPRDAAVMVADVVGPVCETGDYLALGRNLPEPQAGDLLAIMTAGAYGAVQSGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + Sbjct: 385 TRALVPEVLVRGNQYATVRPRIEVDQLIA 413 >gi|312128102|ref|YP_003992976.1| diaminopimelate decarboxylase [Caldicellulosiruptor hydrothermalis 108] gi|311778121|gb|ADQ07607.1| diaminopimelate decarboxylase [Caldicellulosiruptor hydrothermalis 108] Length = 433 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 60/402 (14%), Positives = 125/402 (31%), Gaps = 37/402 (9%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 M TP Y++++ + N++ + ++ A K F M + G Sbjct: 28 MYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCTKAMCKIAKEEGIGLDV 87 Query: 58 SSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLH 115 S E+ F + ++ K + + + I+ + +L + + Sbjct: 88 VSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVDRGVKIVLDNFDELEMLSLICKTKN 147 Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164 K + +RI P + + S+ G ++ ++ + ++ GL H Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMVQKVLQRQELSLVGLHCH 207 Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 + F ML+ + K +IE + LGGG + ++ E Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKIKNELGYEIEMLDLGGGFGIKYTAHDEPPRIEKFIE 267 Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263 + I LEPG +IV T+ + E + Sbjct: 268 AIAEEVEEFCSLRGLKKPFIVLEPGRSIVGEAGITLYTIGSVKEIPNVRNYASVDGGMTD 327 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + + + GR C +GDI + +K G ++ Sbjct: 328 NPRYALYQARYDAYVVENPLGQRTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N P + + + ++ +Y D N Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQSRVIVKRETYEDLVRN 429 >gi|294501127|ref|YP_003564827.1| diaminopimelate decarboxylase [Bacillus megaterium QM B1551] gi|294351064|gb|ADE71393.1| diaminopimelate decarboxylase [Bacillus megaterium QM B1551] Length = 439 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 55/400 (13%), Positives = 127/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + GVK + A K F+ M +++ S Sbjct: 30 GTPLYVYDVALIRQRARGFKETFEKHGVKAQVAYASKAFSTIAMVQVVHEEGLSLDVVSG 89 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115 E+ F E ++ K + D I+ + ++ ++ + Sbjct: 90 GELYTALAADFPKERIHFHGNNKSRAELEMAIKEDVGCIVVDNFYEIALLQEITEQYQKK 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LR+ P + + S+ G E + S+ + G+ H Sbjct: 150 MPVLLRLTPGIEAHTHDYILTGQEDSKFGFDLQNGQADEAVRLVQNSKGLELLGIHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDF-------- 214 + F + + + + +IE++ +LGGG + Sbjct: 210 SQIFETTGFIMATQKLFAKMKEWKQRIEFVPQVLNLGGGFGIRYTEEDQPIPVSQYVEVI 269 Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + +K+ S++ +I++EPG ++V + T ++ +D + ++ Sbjct: 270 IEEVKKQSKQLEVEIPEIWIEPGRSLVGDAGTTLYSIGSRKHVPNVREYVAIDGGMNDNI 329 Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + + G+ C +GD+ D ++ Sbjct: 330 RPALYQAKYEAVIANRMNDESDELVSIAGKCCESGDMLMWDVHLPKANPDDLLAMFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + P + ++ +Y D N Sbjct: 390 YGYSMASHYNRLPKPAVVFVEDGEAQLVVKRETYEDIVKN 429 >gi|224438189|ref|ZP_03659124.1| carboxynorspermidine decarboxylase NspC [Helicobacter cinaedi CCUG 18818] gi|313144634|ref|ZP_07806827.1| carboxynorspermidine decarboxylase NspC [Helicobacter cinaedi CCUG 18818] gi|313129665|gb|EFR47282.1| carboxynorspermidine decarboxylase NspC [Helicobacter cinaedi CCUG 18818] Length = 418 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 133/409 (32%), Positives = 210/409 (51%), Gaps = 46/409 (11%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y++++++L +NL I+K +G K+LLALK +A W FDTL + G+T+S LY Sbjct: 10 IPTPAYVLEEERLNHNLKILESIQKQSGAKILLALKGYAFWRRFDTLKHTLSGSTASGLY 69 Query: 62 EVMLGHEKFGG-----------------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL 104 E LG+E+ GG E ++ AYK E +++L IIFN+ +Q Sbjct: 70 EARLGYEEIGGRANQDKDNTQDSSVQHKEICVFSPAYKASEFESILEYATHIIFNSFNQW 129 Query: 105 NKFKDKAQKLHK----------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE 154 KFK ++ ++GLR+N S + + +P P SRLG + + Sbjct: 130 QKFKPLIDSKNQTLLTQNLSPIEVGLRVNLLYSEVEPPIYNPCVPLSRLGITPSEFTKGV 189 Query: 155 IK----NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + ++GL FH +CE S L + EK FG ++ +W++ GGG H T DY Sbjct: 190 QQYGLQGIDGLHFHTHCEQDSAALSRT-LPHFEKHFGIYLKNKKWVNFGGGHHITRADYD 248 Query: 211 VKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269 + +K+F ++++ +++LEPGEA+ L V+DI EN + I+D S AH+ Sbjct: 249 CELLINLIKDFKQRHNDIEVFLEPGEAVGWQVGFLIGEVVDIVENQGKVAILDVSAAAHM 308 Query: 270 PDYLLYQESATIYPNTGP-------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGD 316 PD L T+ + YT + G +CLAGD+ G++ F+ P+ +GD Sbjct: 309 PDCLEMPYRPTLCKLSKDGNIESDKGINIAQYTYRLGGPTCLAGDVIGDYSFDTPLLVGD 368 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 RI FED+ Y I + N FNGI +P + V + +G + ++ F Y DY Sbjct: 369 RIIFEDMLHYTIVKNNTFNGIPLPFLGVIDTNGKFEILKRFDYTDYKQR 417 >gi|73748375|ref|YP_307614.1| diaminopimelate decarboxylase [Dehalococcoides sp. CBDB1] gi|73660091|emb|CAI82698.1| diaminopimelate decarboxylase [Dehalococcoides sp. CBDB1] Length = 434 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 61/399 (15%), Positives = 122/399 (30%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ + N A + A K F + L + S Sbjct: 34 GTPLYIFDELTIRQNCRDFKREFSRRYADSSISYASKAFLHPALLKILAEEGMSLDVVSG 93 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ + + F + + K + A+ + I+ ++ ++ A + Sbjct: 94 GELSVANNAGFPMDMVYLHGNNKSAEELRLALRLHVGRIVVDSFDEIKLLSKLADESGHI 153 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168 I LRI P V + S+ G E+ N+ G FH + Sbjct: 154 PDILLRITPGVDAHTHQHITTGKLDSKFGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQ 213 Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRL-- 218 +L + + IE + +GGG + P+ + + + Sbjct: 214 IFETQPFLDAIDLVLDFAAQVQERYGFDIEELDIGGGYGVQYEVDKPAPPISAYAEAIGA 273 Query: 219 -----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + + +EPG AI+ TV I + + + ++ Sbjct: 274 KVVSKCRSLKLTPPSLNIEPGRAIIAQAGVALYTVGVIKDIPGIRLYASVDGGMGDNIRP 333 Query: 272 YLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + + N + G+ C +GDI ++ GD ++ Y Sbjct: 334 ALYEAKYEAVVANNVQSAEKEKVTIAGKFCESGDILIRDIELPSLRTGDILAVPCCGAYC 393 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + + +NG + P + + R + D + L Sbjct: 394 LPMSSNYNGYHRPAVVMLKNGEDRLIRRRETVEDL-SRL 431 >gi|262373159|ref|ZP_06066438.1| diaminopimelate decarboxylase [Acinetobacter junii SH205] gi|262313184|gb|EEY94269.1| diaminopimelate decarboxylase [Acinetobacter junii SH205] Length = 416 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 120/389 (30%), Gaps = 26/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L + ++ A+K + + + L + G + E Sbjct: 25 GTPLYVYSKATLEKHYLDMDRAFDFIDHQICFAVKSNSNLAVLNVLAKLGAGFDIVTGGE 84 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K + ++L++ + A KL Sbjct: 85 LARVLAAGGNPAKIVFSGLGKSEADIEKALDVGIACFNVESYAELDRIQKVAAKLGKKAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167 I LR+NP V ++ G + G+ H Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYETYQYAASLPNLEIVGIDCHIGSQLT 204 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 E K F+ + + +E ++ I +GGG+ KD ++ ++ EK Sbjct: 205 ETKPFVDALDRVVLMIEELKKLGINLKHIDIGGGLGVRYKDETPPTVAEYANAMRPVLEK 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++Y+EPG +I N L T V L N +N I+D+++ + L Sbjct: 265 LGLKVYMEPGRSISANAGALLTKVDLLKPTNHRNFAIIDAAMNDLIRPALYEAWMDIQSV 324 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T + G C GD G+ ++ D ++ Y + +N Sbjct: 325 APHSDVEVKTWDLVGAICETGDFLGKQRDLA-LQENDVLAVLGAGAYGFVMSSNYNTRGR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366 + + D + L Sbjct: 384 AAEVMVSGDQAYLIRERETIESLWEKERL 412 >gi|289192693|ref|YP_003458634.1| diaminopimelate decarboxylase [Methanocaldococcus sp. FS406-22] gi|288939143|gb|ADC69898.1| diaminopimelate decarboxylase [Methanocaldococcus sp. FS406-22] Length = 435 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 71/398 (17%), Positives = 136/398 (34%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG------VKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++ ++++ N + + K + A K A + L + G Sbjct: 30 GTPLYVMSEEQIKINYNRYVEAFKRYEEETGKEFIVAYAYKANANLAITRLLAKLGCGAD 89 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113 S E+ + + +N K E + +++S+L + A++ Sbjct: 90 VVSGGELYIAKLSGVPSDKIVFNGNCKTKEEIIMGIEAKIRAFNVDSISELILINETAKE 149 Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162 + + + RINP+V ++ G + +E E V G+ Sbjct: 150 IGEIANVAFRINPNVDPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMENVKVVGVH 209 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFC 215 H + F+ + + + E +IE ++LGGG+ + KD Sbjct: 210 CHIGSQLTDISPFVEETRKVMDFVVELKKEGIEIEDVNLGGGLGIPYYKDKEIPTQKDLA 269 Query: 216 QRLKEFSEKY-----SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV 269 + +Y + LEPG ++V L V I E V++D+ + + Sbjct: 270 DAIINTMLQYQDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMM 329 Query: 270 PDYLLYQESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + I V G C + D+FG V++GD ++ DV Y Sbjct: 330 RPAMYEAYHHIINCKVKDEKEVVSVAGGLCESSDVFGRDRELDKVEVGDILAIFDVGAYG 389 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 I+ N +N P + + + G +Y D Sbjct: 390 ISMANNYNARGRPRMVLTSKKGVFLIRERETYADLIAK 427 >gi|170761245|ref|YP_001788652.1| diaminopimelate decarboxilase [Clostridium botulinum A3 str. Loch Maree] gi|169408234|gb|ACA56645.1| diaminopimelate decarboxilase [Clostridium botulinum A3 str. Loch Maree] Length = 422 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 71/398 (17%), Positives = 130/398 (32%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP Y++D+ + +N + K+ A K F M + + + S E Sbjct: 23 KTPLYVMDETLIRDNCKRYVTSFNKGKNKVAYAGKAFLTKAMCNLIKEEGLSLDVVSGGE 82 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + F + ++ K E + N T + + +L+K + + + K Sbjct: 83 IFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTFVADNFQELDKINNICKNKNIKQR 142 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 LRI P + + S+ G D + E G H + Sbjct: 143 VILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKAVKKAYKLENIQFVGFHCHIGSQ 202 Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 ML+ I++ IE + LGGG K+ + + Sbjct: 203 IFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGGFGIYYKEGDEPKKIEEFCKIILD 262 Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + +EPG +IV N+ +V I E + + + ++ Sbjct: 263 KTRSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSIKEIPNIAKYIAVNGGMTDNIRP 322 Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L E + N V G+ C +GDI + V+ D ++ + Y Sbjct: 323 ALYKSEYECVVCNKALDNLLEEVKVVGKCCESGDILIDNVKLPIVETDDLLAILNTGAYG 382 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N +P++ N D T R SY + N Sbjct: 383 YSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQN 420 >gi|147669155|ref|YP_001213973.1| diaminopimelate decarboxylase [Dehalococcoides sp. BAV1] gi|146270103|gb|ABQ17095.1| diaminopimelate decarboxylase [Dehalococcoides sp. BAV1] Length = 434 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 61/399 (15%), Positives = 122/399 (30%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ + N A + A K F + L + S Sbjct: 34 GTPLYIFDELTIRQNCRDFKREFSRRYADSSVSYASKAFLHPALLKILAEEGMSLDVVSG 93 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ + + F + + K + A+ + I+ ++ ++ A + Sbjct: 94 GELSVANNAGFPMDMVYLHGNNKSAEELRLALRLHVGRIVVDSFDEIKLLSKLADESGHI 153 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168 I LRI P V + S+ G E+ N+ G FH + Sbjct: 154 PDILLRITPGVDAHTHHYITTGKLDSKFGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQ 213 Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRL-- 218 +L + + IE + +GGG + P+ + + + Sbjct: 214 IFETQPFLDAIDLVLDFAAQVQERYGFDIEELDIGGGYGVQYEVDKPAPPISAYAEAIGA 273 Query: 219 -----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + + +EPG AI+ TV I + + + ++ Sbjct: 274 KVVSKCRSLKLTPPSLNIEPGRAIIAQAGVALYTVGVIKDIPGIRLYASVDGGMGDNIRP 333 Query: 272 YLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + + N + G+ C +GDI ++ GD ++ Y Sbjct: 334 ALYEAKYEAVVANNVQSAEKEKVTIAGKFCESGDILIRDIELPSLRTGDILAVPCCGAYC 393 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + + +NG + P + + R + D + L Sbjct: 394 LPMSSNYNGYHRPAVVMLKNGEDRLIRRRETVEDL-SRL 431 >gi|303241562|ref|ZP_07328062.1| diaminopimelate decarboxylase [Acetivibrio cellulolyticus CD2] gi|302590880|gb|EFL60628.1| diaminopimelate decarboxylase [Acetivibrio cellulolyticus CD2] Length = 437 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 63/401 (15%), Positives = 127/401 (31%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ + N +L A K + + + Q G S Sbjct: 30 GTPVYVLDESLIRENCRLYKNAMDKYYDGNGMVLYASKALSTMAVCKIVEQEGLGLDVVS 89 Query: 60 LYEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ + ++ + A+ +N I+ + +L + D A K K Sbjct: 90 GGELYTAMKAGVPMDRIYFHGNNKTCEELELAISNNIRRIVVDNREELKRVNDIASKQGK 149 Query: 117 KIGL--RINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHN 165 + + RI P + + S+ G + + + + V G+ H Sbjct: 150 VVNISFRIKPGIDAHTHDFVQTGQIDSKFGVALENGEAIEIIGEAAKMKNVKVAGVHCHI 209 Query: 166 NCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------- 214 + F ML+ I K +IE ++LGGG Sbjct: 210 GSQIFDLEPFKLAAKVMLEFIAKIKNEIGLEIEELNLGGGFGIKYTMNDDPIEYDHYIES 269 Query: 215 -CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVL------DISENIKNLVIVDSS 264 + ++ E+ I +EPG +IV + V D+ + + + Sbjct: 270 VSKVVRSVCEEKGIKLPFIVMEPGRSIVASAGITLYKVGAVKDIKDVRTYVSVDGGMTDN 329 Query: 265 VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + A + G+ C +GD+ + ++ GD ++ Sbjct: 330 PRYALYQSRYDALIANRADAPKVQDVTIAGKCCESGDLLAKDIKMPEIQAGDILAVLATG 389 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P I + + ++ ++D N Sbjct: 390 AYNYSMSSNYNRIPKPPIVLVKNGKSRVIVKREDFDDIIRN 430 >gi|261495167|ref|ZP_05991630.1| diaminopimelate decarboxylase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309143|gb|EEY10383.1| diaminopimelate decarboxylase [Mannheimia haemolytica serotype A2 str. OVINE] Length = 416 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 61/386 (15%), Positives = 119/386 (30%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L +L + + A+K + + + + + G S E Sbjct: 26 GTPAYVYSRSTLERHLHAFNNAFGSHPHLVCFAVKSNSNIALLNVMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ +VS+L++ A +L K Sbjct: 86 LERVLAAGGEASKVVFSGVAKSHSEIKRALEVGIRCFNIESVSELHRINQVAGELGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ +P + L++ Sbjct: 206 ELQPFLDATDRLIILMEQLREDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282 +++I +EPG AI N L T V + +N IVD+ + + L Sbjct: 266 YENLEIIIEPGRAITANAGILVTKVEYLKQNEDRNFAIVDTGMNDMIRPALYEAYMQITE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + +N Sbjct: 326 VDKTLNRDKAVYDVVGPICETSDFLGKQRELA-ISEGDLIAIRSAGAYGAAMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + ++ D + Sbjct: 385 QAAEIMVDGNQAHLIKARATFADLWR 410 >gi|225871912|ref|YP_002753366.1| diaminopimelate decarboxylase [Acidobacterium capsulatum ATCC 51196] gi|225794282|gb|ACO34372.1| diaminopimelate decarboxylase [Acidobacterium capsulatum ATCC 51196] Length = 436 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 66/394 (16%), Positives = 122/394 (30%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + D + A+K +A + L + G S E Sbjct: 39 GTPLYVYSADHIAQRFDLFARAFAPVSHLICFAVKANSALAILQLLEKRGAGFDIVSGGE 98 Query: 63 VMLGHE--KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + K E ++ K A+ S + +L ++A KL K+ Sbjct: 99 LERVLAVNKKAAERVVFSGVGKTAPEMDLALRSGILLFHVESEGELELLAERASKLRKRA 158 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169 LR+NP V + G + + G+ H + Sbjct: 159 AVSLRVNPDVFAETHPYISTGLREHKFGIEMARARKVYRAVARHKYLEARGVSVHIGSQI 218 Query: 170 KSFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------DYP-----VKDFC 215 + F + + + + I ++ GGG+ + + + Sbjct: 219 RMAEPFGAAAERVAALIGQLRKDGHGIRFLDAGGGLGIEYQAGLEDASFDPAERVQQYAA 278 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLL 274 L + + + LEPG +V L T VL +N K+ VIVD+++ + L Sbjct: 279 ALLHAVATVPEITLLLEPGRFLVAQAGALVTRVLYRKQNGAKHFVIVDAAMNDLIRPALY 338 Query: 275 YQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + A + G C GD F V+ G+ ++ D Y ++ Sbjct: 339 QAHHEVVPVLPRRGARSMVADIVGPVCETGDFFARDRAMAAVREGELLAILDAGAYGMSL 398 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + + R + ND Sbjct: 399 SSNYNSRVRPAEVLVSGKRARLIRRRETINDLLA 432 >gi|15966402|ref|NP_386755.1| diaminopimelate DAP decarboxylase protein [Sinorhizobium meliloti 1021] gi|307315801|ref|ZP_07595314.1| diaminopimelate decarboxylase [Sinorhizobium meliloti BL225C] gi|307321017|ref|ZP_07600423.1| diaminopimelate decarboxylase [Sinorhizobium meliloti AK83] gi|15075673|emb|CAC47228.1| Probable diaminopimelate DAP decarboxylase [Sinorhizobium meliloti 1021] gi|306893292|gb|EFN24072.1| diaminopimelate decarboxylase [Sinorhizobium meliloti AK83] gi|306898547|gb|EFN29221.1| diaminopimelate decarboxylase [Sinorhizobium meliloti BL225C] Length = 422 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 109/388 (28%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHYKVFSQAFADVDAMVCYAMKANSNQAVLKTLGRLGAGLDVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ K A+ + + +L +A + Sbjct: 85 ELRRALAAGIPAGRIMFSGVGKTAREMDFALEAGIYCFNVESEPELEVLNQRAVRAGRRA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + RINP V + ++ G + V G+ H + Sbjct: 145 PVSFRINPDVDARTHAKISTGKKENKFGISWERARGVYAHAAELPGIEVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F K + IE + +GGG+ ++ + +K Sbjct: 205 TELQPFDDAFKLLRELVDTLRSDGHVIEHVDIGGGLGIPYREDNNPPPLPDAYADIVKNQ 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + +I EPG IV N L T V+ + + K VIVD ++ + L Sbjct: 265 LKGLDCKIVTEPGRLIVGNAGILVTEVVYVKDGGDKTFVIVDGAMNDLIRPTLYEAYHEI 324 Query: 281 IYPN-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 A V G C GD K GD + Y + +N Sbjct: 325 RPVKISAASAPRIKADVVGPVCETGDYLALDREMAMPKPGDLFAIGSAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + D Y++ Sbjct: 385 SRLLVPEVLVKGDRFHVIRPRRDYDELI 412 >gi|256112311|ref|ZP_05453232.1| diaminopimelate decarboxylase [Brucella melitensis bv. 3 str. Ether] gi|265993744|ref|ZP_06106301.1| diaminopimelate decarboxylase [Brucella melitensis bv. 3 str. Ether] gi|262764725|gb|EEZ10646.1| diaminopimelate decarboxylase [Brucella melitensis bv. 3 str. Ether] Length = 421 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + + ALK + + L + G + S Sbjct: 25 VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84 Query: 62 EVMLGHEK-FGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K A+ + + +L + A Sbjct: 85 EIRRALAASIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G + + NV G+ H + Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + KE I + +GGG+ P + Q + + Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + ++ EPG IV N L T V+ + E + KN VIVD+++ + L Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A G C GD G GD I+ Y + +N Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y + Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413 >gi|323143200|ref|ZP_08077896.1| diaminopimelate decarboxylase [Succinatimonas hippei YIT 12066] gi|322417041|gb|EFY07679.1| diaminopimelate decarboxylase [Succinatimonas hippei YIT 12066] Length = 416 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 128/388 (32%), Gaps = 24/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ K L+ +++ + A+K ++ + + G S E Sbjct: 26 GSPLYIYSKATLVRHMNAFKEALAKKRHLICYAVKANSSLSILALMASLGAGFDVVSEGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + ++ K A D +V ++N A+ L KK Sbjct: 86 LRRVIKAGGDPKKVVFSGVGKTAHEIAFALEQGIDCFNIESVPEINAISSVAKSLGKKAR 145 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 +R+NP+V ++ G + + + + G+ H + Sbjct: 146 VSVRVNPNVDAKTHPSISTGLKSNKFGIAYDEALAVYRQMAADPNLEICGIDCHIGSQMT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 S + ++ KE +I+ I +GGG+ T D ++ + + Sbjct: 206 SGAPILEATERLLDLYKELTECGIKIDHIDIGGGLGVTYGDETPPSPYEYMSAVINRLKD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283 + IY+EPG A+V N L T L + + + D+ + + L + Sbjct: 266 LDISIYVEPGRAMVANAGILVTKALYLKKGSVKNFCIVDAGMNDLIRPALYNSWMNIVEV 325 Query: 284 NTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D G+ V G+ ++ Y + + +N + Sbjct: 326 KKHQDAKVDLYDVVGPVCESDDFLGKERKLA-VSAGEYLAVRGAGAYGSSMSSNYNSRLL 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + + + + ++ + N S Sbjct: 385 CAEILVDKNKSYVIRKRQDFSQLWENES 412 >gi|289641898|ref|ZP_06474054.1| diaminopimelate decarboxylase [Frankia symbiont of Datisca glomerata] gi|289508307|gb|EFD29250.1| diaminopimelate decarboxylase [Frankia symbiont of Datisca glomerata] Length = 445 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 51/402 (12%), Positives = 110/402 (27%), Gaps = 40/402 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L+ +L + + ++K + + L G S E Sbjct: 26 GTPVYVYSHGTLVTHLRQVADAFADLAPLICFSVKALSNIHLLRGLAAAGAGVDVVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + + AV S + + ++ A + G Sbjct: 86 LYRALLAGVPAQRIVFAGVGKSDEELRYAVRSGIRCVNVESEGEMRALARAAAECRMPAG 145 Query: 120 LRINPSVS----YSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + + R + G ++ E GL FH Sbjct: 146 AAVRVNPDVAVGSRTPAKTTTGRRGGKFGIDLDRVHEVYRLAVDDEWLRPEGLHFHLGSP 205 Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFS 222 + + + + I++GGG + DF + Sbjct: 206 VFHPRAYGDAVDKVLTVTEKLTADGAPVPTINIGGGFPADYEGSGVPGWSDFAAVIAPKL 265 Query: 223 EKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 + + +EPG +I N L +V + + V++ + +H+ Y Sbjct: 266 RSFVAAGGTVVMEPGRSIAANAGVLLASVRYLKTSGSRNVVITDTGMSHLIRTAFYDTFH 325 Query: 280 TIYPNTGPY-----------------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 ++P V G C + D + ++ GD ++ Sbjct: 326 FLWPARPRNGLSPVGRTGEHDQPDLARYDVAGPLCESSDYLAKDRLLPSLRPGDVLAIFT 385 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + P + + R +Y D + Sbjct: 386 AGAYGMTMASHYNSLPRPAEVLVDGGDVRLIRRRETYEDLVS 427 >gi|90409168|ref|ZP_01217284.1| putative carboxynorspermidine decarboxylase [Psychromonas sp. CNPT3] gi|90309728|gb|EAS37897.1| putative carboxynorspermidine decarboxylase [Psychromonas sp. CNPT3] Length = 376 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 173/367 (47%), Positives = 240/367 (65%), Gaps = 3/367 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TPY++ID+ KL+ NL+ A +++ +GVKL+LALKCF+ +G F+T+ Y+DGTTSS Y Sbjct: 8 LNTPYFMIDESKLIENLEKAKRLKEISGVKLVLALKCFSTFGTFETIKPYLDGTTSSGPY 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y +I+ V D IIFN++SQL+ D K +GLR Sbjct: 68 EVKLGYETFGGETHAYSVGYSKNDIENVKHMADKIIFNSLSQLDAHYDN-TKQSASLGLR 126 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP S + LADP RP+SRLG K S V+G MFH NCENK F A+L + Sbjct: 127 INPERSQAGQDLADPARPYSRLGVKQSLLDLSVTDKVDGFMFHMNCENKDVDAFIAILDH 186 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I F ++ +++W+SLGGGI FT +YP++ LK F++K+ +Q+YLEPGEAI+T T Sbjct: 187 ISTTFSEYLDKLKWLSLGGGIFFTYPNYPIEKLGMALKNFAQKHQLQLYLEPGEAIITRT 246 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--YTAMVCGRSCLA 299 T L +V+DI EN K IVDS+ EAH D L+Y E A++ + Y ++ SCLA Sbjct: 247 TDLVVSVIDIVENDKKTAIVDSATEAHRLDTLIYNEPASVKEASANGIYPYVIGSCSCLA 306 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD F E F+ P++IG ++ D AGY + + NWFNG+ MP+I K VDG+I+ + FSY Sbjct: 307 GDQFCETQFDAPLQIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYFKRVDGSIETLNSFSY 366 Query: 360 NDYYNNL 366 +D+ L Sbjct: 367 DDFKATL 373 >gi|326315781|ref|YP_004233453.1| diaminopimelate decarboxylase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372617|gb|ADX44886.1| diaminopimelate decarboxylase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 427 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 57/390 (14%), Positives = 113/390 (28%), Gaps = 28/390 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + +L+ L+ V++ A+K ++ + + G S Sbjct: 33 LGTPLYVYSRASMLSALEAYQRGFAGRKVQICYAMKANSSLAVLQLFARAGCGFDIVSAG 92 Query: 62 EVMLGHEKFG--GETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ G G+ V E+ + + +L + A Sbjct: 93 ELRRVLAAGGEAGKVIFSGVGKTRQEMREALEAGIGCFNVESEPELEVLSEVAMACGRRA 152 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 + +R+NP+V ++ G + V G+ H + Sbjct: 153 PVSIRVNPNVDPKTHPYISTGLKGNKFGVAHERTVATYQRAAALPGLQVVGIDCHIGSQI 212 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 + + + + I I GGG+ + + Sbjct: 213 TEATPYLDAVDRMLDLVAQIESAGIPIHHIDFGGGLGIDYNGDTPPAADALWTQLLARLD 272 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES- 278 Q +EPG ++V N T VL + + + D+++ + Sbjct: 273 ARGYGDRQFMIEPGRSLVGNAGVCLTEVLYVKPGEQKNFCIVDAAMNDLPRPAMYQAFHG 332 Query: 279 ----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 A P P V G C +GD G V+ GDR++ Y + + + Sbjct: 333 IVPVAAPAPGAAPAVYDVVGPVCESGDWIGRDRTLA-VRSGDRLAVLSAGAYCSSMGSNY 391 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N P + + D + Sbjct: 392 NTRARPAEVLVDGGQAHLIRVREPLEDTFR 421 >gi|289432423|ref|YP_003462296.1| diaminopimelate decarboxylase [Dehalococcoides sp. GT] gi|288946143|gb|ADC73840.1| diaminopimelate decarboxylase [Dehalococcoides sp. GT] Length = 434 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 61/399 (15%), Positives = 122/399 (30%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ + N A + A K F + L + S Sbjct: 34 GTPLYIFDELTIRQNCRDFKREFSRRYADSSVSYASKAFLHPALLKILAEEGMSLDVVSG 93 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ + + F + + K + A+ + I+ ++ ++ A + Sbjct: 94 GELSVANNAGFPMDMVYLHGNNKSAEELRLALRLHVGRIVVDSFDEIKLLSKLADESGHI 153 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168 I LRI P V + S+ G E+ N+ G FH + Sbjct: 154 PDILLRITPGVDAHTHQHITTGKLDSKFGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQ 213 Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRL-- 218 +L + + IE + +GGG + P+ + + + Sbjct: 214 IFETQPFLDAIDLVLDFAAQVQERYGFDIEELDIGGGYGVQYEVDKLAPPISAYAEAIGA 273 Query: 219 -----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + + +EPG AI+ TV I + + + ++ Sbjct: 274 KVVSKCRSLKLTPPSLNIEPGRAIIAQAGVALYTVGVIKDIPGIRLYASVDGGMGDNIRP 333 Query: 272 YLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + + N + G+ C +GDI ++ GD ++ Y Sbjct: 334 ALYEAKYEAVVANNVQSAEKEKVTIAGKFCESGDILIRDIELPSLRTGDILAVPCCGAYC 393 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + + +NG + P + + R + D + L Sbjct: 394 LPMSSNYNGYHRPAVVMLKNGEDRLIRRRETVEDL-SRL 431 >gi|254713605|ref|ZP_05175416.1| diaminopimelate decarboxylase [Brucella ceti M644/93/1] gi|254716041|ref|ZP_05177852.1| diaminopimelate decarboxylase [Brucella ceti M13/05/1] gi|261217809|ref|ZP_05932090.1| diaminopimelate decarboxylase [Brucella ceti M13/05/1] gi|261321343|ref|ZP_05960540.1| diaminopimelate decarboxylase [Brucella ceti M644/93/1] gi|260922898|gb|EEX89466.1| diaminopimelate decarboxylase [Brucella ceti M13/05/1] gi|261294033|gb|EEX97529.1| diaminopimelate decarboxylase [Brucella ceti M644/93/1] Length = 420 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 65/388 (16%), Positives = 117/388 (30%), Gaps = 25/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + + ALK + + L + G + S Sbjct: 25 VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK----FKDKAQKLHK 116 E+ ++ K FN S+ + A Sbjct: 85 EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELKILSARAVAAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G + + NV G+ H + Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFS 222 F + KE I + +GGG+ + P + Q + + Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPVAYAQIVAKHI 264 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES--- 278 + ++ EPG IV N L T V+ + E + KN VIVD+++ + L Sbjct: 265 KPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDIR 324 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 N A G C GD G GD I+ Y + +N Sbjct: 325 PVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYNS 384 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y + Sbjct: 385 RLLIPEVLVDGERYHVVRPRRTYEELLA 412 >gi|260220221|emb|CBA27542.1| Diaminopimelate decarboxylase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 464 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 117/390 (30%), Gaps = 29/390 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ K +L+ L ++ A+K ++ + + G S E Sbjct: 71 GTPLFVYSKASMLDALAAYQRGFAGRNARICYAMKANSSLAILQLFAKAGCGFDIVSEGE 130 Query: 63 VMLGHEKF--GGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + G+ V + A+ + ++++ + A Sbjct: 131 LARVLAAGADAGKVIFSGVGKTRAEMARALEVGIGCFNVESEAEIDVLNEVALGMGKQAP 190 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 I +R+NP+V ++ G + V G+ H + Sbjct: 191 ISIRVNPNVDPKTHPYISTGLKGNKFGIAHERTLLTYQRAAALPGLKVVGIDCHIGSQIT 250 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + I I GGG+ + K Sbjct: 251 EETPYLDAMDRMLDLVESIEAAGIGIHHIDFGGGLGINYNGDTPPAADALWHKLLAKLDA 310 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 Q+ +EPG ++V N T VL + + + + +P +YQ TI Sbjct: 311 RGFGQRQLMIEPGRSLVGNAGVCVTEVLYMKPGEQKNFCIVDAAMNDLPRPAMYQAFHTI 370 Query: 282 YPNT-------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P G V G C +GD G + V+ GD+++ Y ++ + + Sbjct: 371 VPVKQAASQSSGAEVFDVVGPVCESGDWIGHDRTLQ-VQSGDKLAVLSAGAYCMSMSSNY 429 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + + + S+ D Sbjct: 430 NSRPKAAEVLVDGAHSHLIRQRDSFADQIR 459 >gi|255320350|ref|ZP_05361534.1| diaminopimelate decarboxylase [Acinetobacter radioresistens SK82] gi|262379367|ref|ZP_06072523.1| diaminopimelate decarboxylase [Acinetobacter radioresistens SH164] gi|255302545|gb|EET81778.1| diaminopimelate decarboxylase [Acinetobacter radioresistens SK82] gi|262298824|gb|EEY86737.1| diaminopimelate decarboxylase [Acinetobacter radioresistens SH164] Length = 416 Score = 228 bits (582), Expect = 9e-58, Method: Composition-based stats. Identities = 65/386 (16%), Positives = 130/386 (33%), Gaps = 24/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ KQ + ++ A+K + + L + G + E Sbjct: 25 GTPLYVYSKQAFEKHYTDMDRAFNFIDHQICFAVKSNSNLAVLGVLAKLGAGFDIVTGGE 84 Query: 63 VMLGH-EKFGGETHAYNV-AYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ + +I+ A+ + ++L++ + A+KL + Sbjct: 85 LARVLAAGGDPAKVVFSGLGKTEIDIEKALNVGIACFNVESHAELDRIQKVAKKLGQKAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC--- 167 + LR+NP V ++ G E+ N+ G+ H Sbjct: 145 VSLRVNPDVDAKTHPYISTGLKENKFGIPSDSVFETYQYAASLPNLNIVGIDCHIGSQLT 204 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 E K F+ + + ++ Q++ I +GGG+ T KD V+++ LK +K Sbjct: 205 ETKPFVDALERVMLMIEQLNELGIQLKHIDIGGGLGVTYKDEVPPTVQEYADALKPALQK 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++Y+EPG +I N L T V L N +N I+D+++ + L Sbjct: 265 LGLKVYMEPGRSISANAGILLTRVDLLKPTNHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324 Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G C GD G+ + D ++ Y + +N Sbjct: 325 EPHQDIQEKEWDIVGAICETGDFLGKERKLA-LAENDLLAVLGAGAYGFVMSSNYNTRAR 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 + N + + Sbjct: 384 AAEVMVNNHQAYLVRERETIESLWER 409 >gi|85711583|ref|ZP_01042641.1| Diaminopimelate decarboxylase [Idiomarina baltica OS145] gi|85694735|gb|EAQ32675.1| Diaminopimelate decarboxylase [Idiomarina baltica OS145] Length = 417 Score = 228 bits (582), Expect = 9e-58, Method: Composition-based stats. Identities = 68/386 (17%), Positives = 118/386 (30%), Gaps = 26/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K ++L N + KL A+K + + L Q+ S E Sbjct: 26 GTPLYVYSKSQILANWQKFR-AFWPSQHKLCYAVKANSNLAILQLLAQHGAWFDIVSGGE 84 Query: 63 VMLGHEKFGG--ETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G + VA + EI A+ + ++L + + A+ L Sbjct: 85 LKRVLAAGGSANQVVFSGVAKSEAEIRFALEKGIACFNVESAAELERIEQVARALKTRAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + + G H + Sbjct: 145 VSLRVNPDVDAKTHPYISTGLKANKFGIAINDAMAVFRRAHTLNHIELLGADCHIGSQIM 204 Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 S F K + K ++ + LGGG + + D L+ + Sbjct: 205 SDAPFLDAAKRMFKLLERLQEEAIELSHLDLGGGFGVDYEGHATLDLENYLQGVIDLAHD 264 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIY 282 + LEPG AIV + L + V I + + VD+ + + L + Sbjct: 265 YPKLTLMLEPGRAIVGDAGVLISKVEYIKRSDDKQFVLVDAGMNDLMRPSLYQAWHDIVP 324 Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 V G C G G V D I+ + Y + +N Sbjct: 325 VRELTGVADGIVDVVGPVCETGCFLGHARHL-NVNADDLIAIKHAGAYGFTMASNYNTRV 383 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 P + D +++D Sbjct: 384 RPAEVLVENDRAWLIRERETFDDLIR 409 >gi|195952897|ref|YP_002121187.1| diaminopimelate decarboxylase [Hydrogenobaculum sp. Y04AAS1] gi|195932509|gb|ACG57209.1| diaminopimelate decarboxylase [Hydrogenobaculum sp. Y04AAS1] Length = 420 Score = 228 bits (582), Expect = 9e-58, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + K+ ALK + L G S E Sbjct: 31 GTPLYVYSASYIKDKAKAYKEAFKDTDF--HYALKANGNLSIIKLLKDEGFGADIVSGGE 88 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + Y K E + + +L+ D A+ L Sbjct: 89 LRKAIKAGIEASKIVYAGVGKTMEELKAAVEAEIKMFNVESSIELDILNDIAKNLGKKAN 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170 + +R+NP V S+ G K + NV G+ H + Sbjct: 149 VAIRVNPDVDPKTHPYISTGMKKSKFGVDIKTAYKEYQYAKSLKHLNVIGIHCHIGSQLL 208 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFSE 223 + + + + + I++I +GGG+ K + + L + Sbjct: 209 DVSPYIEASEKVRELYDKLVKDGFDIKYIDMGGGLGIKYKPEEQEPHPKDLKEALYPAFK 268 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++ LEPG ++V N L T V + + K+ VIVD+ + + + + Sbjct: 269 DIKARLCLEPGRSMVGNAGILITEVQFLKDKGHKHFVIVDAGMNDLIRPSIYGAYHHIVP 328 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + + G C GD + V GD ++ Y + + +N Sbjct: 329 THNKYKEDFIKTDIVGPICETGDFLAQDREIHKVDRGDYLAVLSAGAYGFSMSSHYNIRP 388 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + +Y DY + Sbjct: 389 RAAEVLIENGKYRLIRSRETY-DYID 413 >gi|56476690|ref|YP_158279.1| diaminopimelate decarboxylase [Aromatoleum aromaticum EbN1] gi|56312733|emb|CAI07378.1| Diaminopimelate decarboxylase [Aromatoleum aromaticum EbN1] Length = 420 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 59/387 (15%), Positives = 117/387 (30%), Gaps = 23/387 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L D + A+K + G+ + G S E Sbjct: 32 GTPTYVYSRAALEQAFDAYRDALAGRRALVCYAVKANSNLGVLAVFAKLGAGFDIVSGGE 91 Query: 63 V--MLGHEKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + +L G+ V E+ A+ + + ++L + A +L Sbjct: 92 LSRVLAAGGDPGKVVFSGVGKSAGEMRQALAAGIRCFNVESEAELERLDMLAGELGTRAP 151 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCE-- 168 I LR+NP V ++ G + ++G+ H + Sbjct: 152 IALRVNPDVDPKTHPYISTGLKNNKFGVAFDTALALYRRAAGMANVRISGIACHIGSQLL 211 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE---FSEK 224 + + + + E ++ I LGGG+ +D L + Sbjct: 212 DSGPIAEAAEKVLGLVDELAAEGIHLDHIDLGGGLGIRYRDEAPPSVAAYLAPLLRLLDG 271 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 S ++ EPG +++ N L T + + +N IVD+++ L + Sbjct: 272 RSEELCFEPGRSLIGNAGLLLTRIEYLKPGAERNFAIVDAAMNDLARPALYDAYHEAVAV 331 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C +GD V GD ++ Y + + +N Sbjct: 332 APRDVPERNYEIVGPICESGDFLAHDRPLA-VAAGDLVALLSAGAYGMAMSSNYNTRPRA 390 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + + + Y S Sbjct: 391 AEVIVDGSRMHLVRQRETVESLYALES 417 >gi|167854915|ref|ZP_02477691.1| diaminopimelate decarboxylase [Haemophilus parasuis 29755] gi|167853982|gb|EDS25220.1| diaminopimelate decarboxylase [Haemophilus parasuis 29755] Length = 419 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 68/386 (17%), Positives = 121/386 (31%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDKAFGDHPHLICFAVKSNSNLALLNVIARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A +VS+L + + A +L K Sbjct: 86 LERVLAAGGDASKVVFSGVAKSHREIARALEVGIRCFNVESVSELKRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G K+ E + G+ H + Sbjct: 146 ISLRVNPDVDAKTHPYISTGLKENKFGVSVKEAREVYRFATTLPHVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P++ L + Sbjct: 206 ELQPFLDATDRVIVLMEQLKQDGIELHHLDLGGGLGVTYTDETPPHPMEYAAALLHKLRT 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282 +++I LEPG AI N L T V I +N IVD+ + + L I Sbjct: 266 YPNLEIILEPGRAITANAGILVTKVEYIKQNEDRRFAIVDTGMNDMIRPALYEAYMQIIE 325 Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 N V G C D G+ + GD I+ Y + +N Sbjct: 326 VNQSLVREKAIYDVVGPICETSDFLGKQREL-TITEGDLIAMRSAGAYGATMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D S+ D + Sbjct: 385 QAIEVMVDGDKAHLIKARASFEDLWR 410 >gi|71905849|ref|YP_283436.1| diaminopimelate decarboxylase [Dechloromonas aromatica RCB] gi|71845470|gb|AAZ44966.1| diaminopimelate decarboxylase [Dechloromonas aromatica RCB] Length = 420 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 121/389 (31%), Gaps = 28/389 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR----KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 TP Y+ + L +L + G + A+K + + + + G Sbjct: 26 GTPAYVYSRAALEASLREFHDVLGGHVAGQGALVCYAVKANSNLAILNVFARLGAGFDIV 85 Query: 59 SLYEVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QK 113 S E+ + ++ K D A+ + ++L + + A Sbjct: 86 SGGELQRVLAAGADPKKVVFSGVGKTADEMKLALDVGIFCFNVESAAELERLNEVASQCG 145 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNN 166 I LR+NP+V ++ G + ++ + V G+ H Sbjct: 146 KKAPISLRVNPNVDPKTHPYISTGLKGAKFGVAYDNALDLYRRAAALPSIEVTGIDCHIG 205 Query: 167 CENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----LK 219 + F L I + I + LGGG+ + L Sbjct: 206 SQLLDPSPFVEALDRILALVDQMAAEGIHIHHLDLGGGLGIKYNAEQAQPTVASYLTPLL 265 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES 278 + +Q+ LEPG +V N L T + + + KN I+D+++ + L Sbjct: 266 DKLAGRGLQVVLEPGRRLVGNAGLLLTRIEYLKQGEAKNFAIIDAAMNDLMRPALYEAWH 325 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + V G C GD G+ V+ GD ++ Y + + +N Sbjct: 326 DINPVVPRSGVATEYDVVGPVCETGDFLGQARPLV-VEAGDLLAVMSAGAYGMAMASNYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + + Y Sbjct: 385 TRPRAVEVMVDGDKIHVIRQRETVEQLYA 413 >gi|149912175|ref|ZP_01900758.1| carboxynorspermidine decarboxylase [Moritella sp. PE36] gi|149804745|gb|EDM64791.1| carboxynorspermidine decarboxylase [Moritella sp. PE36] Length = 397 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 176/377 (46%), Positives = 245/377 (64%), Gaps = 13/377 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I + KLL NL+ ++ +GVKL+LALKCF+ WG F+T+++Y+DGTTSS Y Sbjct: 19 LKTPYFMIHEDKLLRNLEICKQLKDLSGVKLVLALKCFSTWGTFNTISKYLDGTTSSGPY 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LGHE F GETHAY+V Y + ++ AV D IIFN+VSQL + + +GLR Sbjct: 79 EVQLGHETFPGETHAYSVGYSEDDVIAVRDIADKIIFNSVSQLERMQPL-LPASSSVGLR 137 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LADP R +SRLG K + ++GLMFH NCENK F+ ++ +L Sbjct: 138 INPEVSYAGQDLADPARAYSRLGVKQAGLTAETVAKLDGLMFHMNCENKDFVAYNKILTT 197 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I ++F + Q+ W+SLGGG+ FT YPV + LK F+EK+ VQ+YLEPGEA++T+T Sbjct: 198 ISEQFSAHLDQVSWVSLGGGLFFTYPGYPVAELALALKAFAEKHQVQLYLEPGEAVITDT 257 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAMVCGRSCLA 299 T L +VLDI EN K IVDS+ EAH D L+Y E A+ G + ++ SCLA Sbjct: 258 TDLVVSVLDIVENDKKTAIVDSATEAHRLDTLIYNEPASFAEATEDGQHPYIIGSCSCLA 317 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD----------G 349 GDIFGE +F +P+++GDR++ +D AGY + + NWFNG+ MP+I K V G Sbjct: 318 GDIFGEANFPQPLQVGDRLTIKDSAGYTMVKLNWFNGLKMPSIYYKRVGSGGVDGERVEG 377 Query: 350 TIKAIREFSYNDYYNNL 366 I+ + +F+Y D+ L Sbjct: 378 KIETLNQFNYQDFKATL 394 >gi|330507768|ref|YP_004384196.1| diaminopimelate decarboxylase [Methanosaeta concilii GP-6] gi|328928576|gb|AEB68378.1| diaminopimelate decarboxylase [Methanosaeta concilii GP-6] Length = 427 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 67/384 (17%), Positives = 118/384 (30%), Gaps = 30/384 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ +++L N+ + A+K + Q G S E Sbjct: 30 GTPLYVTSERRLRENIRRYHRAF--PDAEKYFAVKANGNLAILQVAAQEGMGADIFSAGE 87 Query: 63 VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--I 118 + L + +N + + A L I ++ +L A+ L + I Sbjct: 88 LSLVRLAGIPRDMILFNGNSKSEKDHIAALQAGVRISVDSNEELEHLARTARNLDSEAEI 147 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKS 171 R+NP+VS S+ G + + + + GL H + Sbjct: 148 LFRVNPNVSPKTHPKIATGLRSSKFGIPAEQVAGTYKRAMELEGIKPVGLHCHIGSQILD 207 Query: 172 FLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEK 224 F+ + +E I LGGG+ + D + + + Sbjct: 208 TAPFAEAAGRMMDITRAVVAEGGNVERIDLGGGLGIQYQPDSTAPLPSDLAKAVLPVIQD 267 Query: 225 YSVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + LEPG +IV ++T + T V + N V VD+ L Sbjct: 268 SCRDMGIFPQLILEPGRSIVADSTIMLTGVNVVKRAHVNFVAVDAGFNVLARPMLYDSYH 327 Query: 279 A----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 G T + G C GD+ + GD ++F D Y + + + Sbjct: 328 HVLAANRAEEQGEETYTIVGPICETGDVLARDRRLPRLVRGDTLAFLDAGAYGFSMASQY 387 Query: 335 NGINMPTIAVKNVDGTIKAIREFS 358 NG P + + D Sbjct: 388 NGQPRPAEVLVSEDRWELIRHRED 411 >gi|317128511|ref|YP_004094793.1| diaminopimelate decarboxylase [Bacillus cellulosilyticus DSM 2522] gi|315473459|gb|ADU30062.1| diaminopimelate decarboxylase [Bacillus cellulosilyticus DSM 2522] Length = 444 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 61/400 (15%), Positives = 133/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + ++N + ++ A K F++ MF +++ S Sbjct: 30 GTPLFVYDVKDIVNRAQAFKSAFEEENIEYQVAYASKAFSSIAMFQLIDELGLSLDVVSG 89 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + F E ++ K + + I+ + ++L+ Q L K+ Sbjct: 90 GELYTALKSNFPVERIHFHGNNKSPDEIEMAVKEGIGCIVVDNFTELSWLMAITQSLKKE 149 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKN----VNGLMFHNN 166 + +RI P V + S+ G + I ++ + G+ H Sbjct: 150 MKVLIRITPGVEAHTHEYISTGQEDSKFGFDIQSGQAEKAIMMIQEHQYVQLEGVHSHIG 209 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + F A+ ++ + ++LGGG Sbjct: 210 SQIFETDGFTSAVEAIYNHLLTWKNKLGYEPNVLNLGGGFGIKYTIEDEPLPLEEYVQAM 269 Query: 215 CQRLKEFSEKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K +++K+++ ++++EPG ++V T ++ E V + ++ Sbjct: 270 VKAVKHYAQKFNMTLPEVWIEPGRSLVGEAGTTIYSIGSRKEIPGIRTYVSVDGGMTDNI 329 Query: 270 PDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + G+ C +GD+ + GD ++ Sbjct: 330 RPALYQAKYAAQIANKMDGKSEELVSIAGKCCESGDMLIWDIELPKTEAGDLLAVFSTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + I+ SY D N Sbjct: 390 YGYSMANNYNRILRPAVIFVEDGQEQCVIKRESYEDLVKN 429 >gi|171462912|ref|YP_001797025.1| diaminopimelate decarboxylase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192450|gb|ACB43411.1| diaminopimelate decarboxylase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 432 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 125/391 (31%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 TP Y+ K+ L +A ++ A+K + + D + G Sbjct: 36 GTPLYVYSKKALTEAYQAYDKACVDANGKRRARVHYAMKANSNLAVIDCFKKLSSGFDLV 95 Query: 59 SLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL- 114 S E+ ++ + K A I ++++L+K A +L Sbjct: 96 SGGELARALAIGADPKSLVFAGVGKSAAEIAAALKAGVKCINAESIAELHKINQVATELK 155 Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNN 166 I LR+NP V ++ G + +++ +V G+ H Sbjct: 156 LRAPISLRVNPDVDAQTHPYISTGLKGNKFGIVYHEVLKTYREASLLSQIDVVGIDCHIG 215 Query: 167 CENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + + + L + + I + LGGG+ + D D + Sbjct: 216 SQITTIAPYLDALDKVLDLVAQLKKEGIAIHHLDLGGGLGISYSDETPPDITEFTNTLLN 275 Query: 224 KY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQ 276 + + + LEPG ++V N L TTV + + + D+S+ + L Sbjct: 276 RVAERGFGHLDVVLEPGRSLVGNAGVLLTTVEYLKPGAEKNFCIVDASMTELMRPALYEA 335 Query: 277 ESATIYPNTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + P T + G C +GD G V+ GD ++ Y + Sbjct: 336 HHGIVPVKNKPAEALTYDIVGPVCESGDWLGRNRHLA-VEEGDLLAILSAGAYGFVMASN 394 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 +N P + + + D ++ Sbjct: 395 YNTRPKPAEIMVDGKNIYIIRARENTADLFS 425 >gi|294499104|ref|YP_003562804.1| diaminopimelate decarboxylase [Bacillus megaterium QM B1551] gi|294349041|gb|ADE69370.1| diaminopimelate decarboxylase [Bacillus megaterium QM B1551] Length = 442 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 61/400 (15%), Positives = 128/400 (32%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + + +G ++ A K F M + L + S Sbjct: 30 GTPLYIYDQELIETKCKAFHSAFQRSGFSYQIAYAGKAFLCMEMANLLTKLDMSLDVVSG 89 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ E + E ++ K E + +N + + ++L A +K Sbjct: 90 GELFTALEAGYPAERIHFHGNNKTIEEIEMALDANIGCFVVDNFTELEVLHALAAERKQK 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I LR+ P + + S+ G + +E N+ G+ H Sbjct: 150 ASILLRVTPGIEAHTHEYIMTGQEDSKFGFGLSNDQAMKAVSSALEKPYYNLLGIHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + FS + + +++ +++GGG + + + Sbjct: 210 SQIFEVDGFSRAIDILTDFLFNIRDKMDFEVKVLNVGGGFGIRYTESDSPLPVEYYVDAL 269 Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + ++++EPG +IV T T+ E +D + ++ Sbjct: 270 TEKLSRTLTEQNYTLPEVWIEPGRSIVGEAGTTLYTIGSTKEIPGVRKYVGIDGGMTDNI 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + T + G+ C +GD+ V GD ++ Sbjct: 330 RPALYDAKHEAVLANRVTDKKDETVSIAGKCCESGDMLIWDIDLPRVNQGDLLAVSSTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P + A+ +Y D Sbjct: 390 YNYSMASNYNRIPRPAVVFVKNGEARLAVERETYEDLVRK 429 >gi|315636623|ref|ZP_07891857.1| diaminopimelate decarboxylase [Arcobacter butzleri JV22] gi|315479132|gb|EFU69831.1| diaminopimelate decarboxylase [Arcobacter butzleri JV22] Length = 407 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 66/383 (17%), Positives = 126/383 (32%), Gaps = 21/383 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TPYY+ D + N + + + A+K + + L G S+ E Sbjct: 18 QTPYYVYDFNYITNQYEELKSAFRARKSLIAYAVKANSNLSVIKHLANLGAGADCVSIGE 77 Query: 63 VMLGHE-KFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119 V + ++ D EI L I + ++L++ + A++L+K Sbjct: 78 VKRALKVGIPSYKIIFSGVGKIDDEIRQALELDILMINVESSAELDRVEIIAKELNKIAR 137 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC--- 167 + R+NP++ ++ G I+ G+ H Sbjct: 138 ISIRVNPNIDPKTHPYISTGLHENKFGVDIDSAKRMYIQCKNSENLDPVGIHCHIGSQLT 197 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 E + ++ ++ K ++ +I +GGG+ KD ++ Q + E Sbjct: 198 ELQPIKEAVKIIADLVKNLKAIKIELSFIDIGGGLGIIYKDEKLIDTYEYAQSILETMFG 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL--YQESATI 281 + I EPG IV N+ T VL K VIVD ++ + L Y + Sbjct: 258 LDITIICEPGRFIVGNSGIFVTKVLYEKINGNKRFVIVDGAMNDLIRPALYNAYHRIEVL 317 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 N + G C +GD F + + D ++ Y + +N Sbjct: 318 NDNQDFSDCNLVGPVCESGDFFAKNIQLPKTEHNDLVAIYSAGAYGFTMSSNYNTRGKVA 377 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + ++ D Sbjct: 378 EIAIEDGKDRLIRKRETFEDLIA 400 >gi|170695718|ref|ZP_02886860.1| diaminopimelate decarboxylase [Burkholderia graminis C4D1M] gi|170139323|gb|EDT07509.1| diaminopimelate decarboxylase [Burkholderia graminis C4D1M] Length = 420 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 120/387 (31%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + +A+K + + + + G S E Sbjct: 28 GTPLYVYSRAALTAAWNAYAGACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + E ++ + + +A+ + ++ +L++ A ++ Sbjct: 88 LARVLAAGGKAENTVFSGVGKHANEMREALAAGVKCFNVESIPELDRLNQVAAQMGKKAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G +D V G+ H + Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARATYQAAAAMTNLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + ++ I I +GGG+ T D D + ++ ++ Sbjct: 208 EIAPYLDAVDKVLELVEQIEQDGVTIRHIDVGGGLGITYDDETPPDIGEFVRTVLDRIEA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 ++Y EPG ++V N L T V + KN IVD+++ + A Sbjct: 268 RGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEKNFAIVDAAMNDLARPAMYDAYHAI 327 Query: 281 IYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + G C +GD G V+ GD ++ Y + +N Sbjct: 328 DAAVKRDVPAHVYDIVGPVCESGDWLGRERLLS-VEPGDLLAIRSAGAYGFVMSSNYNTR 386 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + Sbjct: 387 PRAAEVMVDGTQAHVVRAREEVQQLFA 413 >gi|90408777|ref|ZP_01216922.1| diaminopimelate decarboxylase [Psychromonas sp. CNPT3] gi|90310121|gb|EAS38261.1| diaminopimelate decarboxylase [Psychromonas sp. CNPT3] Length = 420 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 59/382 (15%), Positives = 123/382 (32%), Gaps = 28/382 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + + A+K + G+ + + + G S E Sbjct: 27 GTPAYVYSRATIERHWKGLDKAASAYPHMICYAVKANSNLGVLNIMARLGSGFDIVSAGE 86 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 ++ + ++ K A ++S+L + AQ L+ Sbjct: 87 LLRVIQAGGDPKKVVFSGVGKTEIEIATALQASIFCFNIESISELYRINSVAQSLNIKAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I +RINP++ ++ G + + + + G+ H + Sbjct: 147 ISIRINPNIDAGTHPYISTGLKENKFGIEIEQALNVYLLAERLEFIEIKGVDCHIGSQIT 206 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + F L + E I + LGGG+ ++ + ++E +K Sbjct: 207 TLAPFLEALDKLLVLIDELEEVGITITHLDLGGGLGVPYQNETPPEPEDYMREIIKKMGS 266 Query: 226 -SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283 ++++ EPG +I+ N L T V + N + IVD+++ + L I Sbjct: 267 RNLKLLFEPGRSIMANAGVLITKVEYLKINEQKNFAIVDAAMNDLLRPALYNAWQEIIPI 326 Query: 284 NTG--------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N + G C + D G+ V GD ++ Y + +N Sbjct: 327 NNKLQTSTIRPERNYDIVGPICESADFLGKDRTLS-VAEGDYLAVRSSGAYGSTMSSNYN 385 Query: 336 GINMPTIAVKNVDGTIKAIREF 357 P + + + Sbjct: 386 SRCRPVEVMVDSEKAFIVRERE 407 >gi|153953245|ref|YP_001394010.1| hypothetical protein CKL_0608 [Clostridium kluyveri DSM 555] gi|219853879|ref|YP_002471001.1| hypothetical protein CKR_0536 [Clostridium kluyveri NBRC 12016] gi|146346126|gb|EDK32662.1| LysA [Clostridium kluyveri DSM 555] gi|219567603|dbj|BAH05587.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 431 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 64/399 (16%), Positives = 128/399 (32%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ID++ + + K K+ A K F M +N S Sbjct: 29 GTPLYVIDEKLVRDKCRRYYKAFKAHKNNKVTYAGKAFLNLAMCQIINSEGLYLDVVSEG 88 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ + F E ++ K E + + + + + +++K A++ + Sbjct: 89 ELYTALKSGFPMEKIYFHGNNKTLEEIEMGIDLEVGRFVVDNLYEMDKINSLAKEKGKIQ 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNC 167 K+ LRI P + + S+ G K I + G+ H Sbjct: 149 KVLLRITPGIEAHTHEYIKTGQIDSKFGFTMINGEIIDVVKKAISLSNIKLTGIHCHIGS 208 Query: 168 ENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + MLK + K ++E + LGGG + Sbjct: 209 QIFETKPYEDEVEIMLKLVRKIKDETGYEVEELDLGGGFGIYYTPEDKPKTVEDFCSIIL 268 Query: 224 KYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 + + + +EPG +I+ N T T+ I E V + ++ Sbjct: 269 ERAEMKSKELGIRVPSLVIEPGRSIIGNAGTTLYTIGAIKEIPGVRKYVSVDGGMVDNIR 328 Query: 271 DYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + + G+ C +GD+ + V+ GD ++ Y Sbjct: 329 PALYNAPYECTVANRVEDDSKEVVTIAGKCCESGDVLIKNVQLPKVQSGDILAVFTTGAY 388 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N I +P + + + + S+++ N Sbjct: 389 GYSMASNYNKIPIPAVVLVKNGQSRLISKRQSFDNMIEN 427 >gi|218530082|ref|YP_002420898.1| diaminopimelate decarboxylase [Methylobacterium chloromethanicum CM4] gi|218522385|gb|ACK82970.1| diaminopimelate decarboxylase [Methylobacterium chloromethanicum CM4] Length = 422 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 113/389 (29%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL G S Sbjct: 25 VGTPFYCYSTATLERHYRVFAEAFAGDDALVCFAMKANSNQAVLATLAHQGAGMDIVSEG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ GE ++ ++ A+ +N + +L + A + Sbjct: 85 ELRRALAAGVQGERIVFSGVGKTREEMAAALDANILCFNVESEPELAALSEVAVARGRKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + +R+NP V + ++ G + G+ H + Sbjct: 145 PVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARAVYAGAARLPGLEIVGVDAHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 + F + + + ++ + GGG+ L+ Sbjct: 205 TDLIPFDNAARLLCELARDLLADGHRLHHVDFGGGLGIPYRDDNAPPPDPAALAAILRPH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + ++ E G I N L T V+ + + K VIVD ++ + L A Sbjct: 265 FKPLGLRPVFEIGRMIAGNAGILVTRVIYVKPTDEKTFVIVDGAMNDLIRPTLYEAFHAL 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 TA V G C +GD V GD I+ Y + +N Sbjct: 325 RPVREPAPDTPRLTADVVGPVCESGDYLALGREMPMVAPGDLIAVMSAGAYGAVQACTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + SY+D Sbjct: 385 SRRLVPEVLVTGDRSAVVRPRPSYDDLIR 413 >gi|282878501|ref|ZP_06287284.1| carboxynorspermidine decarboxylase [Prevotella buccalis ATCC 35310] gi|281299389|gb|EFA91775.1| carboxynorspermidine decarboxylase [Prevotella buccalis ATCC 35310] Length = 398 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 120/376 (31%), Positives = 186/376 (49%), Gaps = 15/376 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y++++ KL NL + + A V+++LA K +A W F +Y+ TT+SSL E + Sbjct: 23 PIYILEETKLRRNLQLISSVAERADVEIILAFKAYALWKTFPVFREYIHSTTASSLNEAL 82 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGLRI 122 LG F TH Y+ AY++ EI+ + + FN++SQL +F K +GLRI Sbjct: 83 LGFHIFSAPTHTYSPAYEEDEIEEIARLSSHLTFNSLSQLERFGQTVKCVNPSVNVGLRI 142 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP S L +P P +R G V G H +CE+ F L +I Sbjct: 143 NPEYSEVGTDLYNPCAPGTRFGVTANKLPCELPSVVTGFHCHCHCESG-ADVFQRTLAHI 201 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241 E++F + +QI+WI+ GGG T KDY + Q L +F +KY ++ LEPG A T Sbjct: 202 EEKFSPWFSQIKWINFGGGHLMTRKDYDINLLVQTLLDFKKKYPHLKVILEPGSAFAWQT 261 Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----------NTGPYTA 290 L V+D+ E+ + + S H+PD L T+ T + Sbjct: 262 GPLVAQVVDVVEDHSIRTAILNVSFTCHMPDCLEMPYVPTVRFADIVEEENHLPTKEHIY 321 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350 + G SCL+GD G +HF ++IG+ I FED+ Y + N FNG+ P I DG Sbjct: 322 RLGGNSCLSGDFMGSWHFNHELQIGENIIFEDMMHYTTVKTNMFNGVGHPAIGFLRQDGE 381 Query: 351 IKAIREFSYNDYYNNL 366 ++ +R+++++DY + Sbjct: 382 LEMLRKYTFDDYAARM 397 >gi|299132212|ref|ZP_07025407.1| diaminopimelate decarboxylase [Afipia sp. 1NLS2] gi|298592349|gb|EFI52549.1| diaminopimelate decarboxylase [Afipia sp. 1NLS2] Length = 421 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 58/381 (15%), Positives = 109/381 (28%), Gaps = 26/381 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 VGTPFYCYSTATLERHYRVFAEAFAGLDTLVCYAMKANSNQSVLRTLARLGAGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+M + ++ K A+ N I + +L+ A + Sbjct: 85 ELMRARAAGIPADRIVFSGVGKTESELRQALAENILCINVESEPELDLLSRIAHETGNTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 LR+NP + + ++ G + + V G+ H + Sbjct: 145 RISLRLNPDIGAGGHAKISTGKSENKFGIPLEGARAVYARAAKLPGIRVTGVDMHIGSQI 204 Query: 170 KSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 + + I+ I GGG+ + + +K Sbjct: 205 TDLGPMESAFTLLVDFVRTLRADGHAIDHIDFGGGLGIPYESDLPVPPAPDAYADVVKRV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + EPG IV N L + V+ + +N VI+D+++ + L Sbjct: 265 TRGLDCTLMFEPGRMIVGNAGILVSRVIYVKHGEARNFVIIDAAMNDLIRPTLYEAHHDI 324 Query: 281 IYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I A V G C GD +K GD ++ Y + +N Sbjct: 325 IPVREVSSPGDGIVADVVGPVCETGDYLALGRHLPALKAGDLVAVMSSGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIRE 356 + + D Sbjct: 385 TRGLVPEVLVKGDQYAVVRPR 405 >gi|254419909|ref|ZP_05033633.1| diaminopimelate decarboxylase [Brevundimonas sp. BAL3] gi|196186086|gb|EDX81062.1| diaminopimelate decarboxylase [Brevundimonas sp. BAL3] Length = 424 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 54/393 (13%), Positives = 118/393 (30%), Gaps = 29/393 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG-----VKLLLALKCFAAWGMFDTLNQYMDGTT 56 + TP Y+ L + + A+K + + TL + G Sbjct: 25 VGTPVYVYSTATLKRHYGLLRAAADAHREALGEALIAFAVKANSNLSVLATLAKLGSGAD 84 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKA-- 111 + S E+ + ++ K + A+ I + ++L++ A Sbjct: 85 TVSEGEIRRALAAGIPADRIIFSGVGKTDVEMVFAIGVGVRQINIESGAELDRLIAVAAL 144 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFH 164 + + +R+NP+V + G ++ + + GL H Sbjct: 145 MQASPAVAVRVNPNVGAGGHAKITTGGKGDKFGVPVEEAMALYARASASPYVTPVGLACH 204 Query: 165 NNCENKSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQR 217 + A + ++ + + LGGG+ + D+ Sbjct: 205 IGSQINDLAPLEAAFTVLAQMTRDLRAQGHAVTRLDLGGGLGVPYSGGVEPPSPADYVAM 264 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLY 275 V+ EPG + N L + V+ ++E + +++D+++ + L Sbjct: 265 AARVLSGLDVEAAFEPGRLLAANAGVLLSQVIQVNERSDGRRFLVLDAAMNDLMRPALYD 324 Query: 276 QES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + V G C GD F P++ D + F Y + Sbjct: 325 AFHDIKPVNPRPGAALSHDVVGPVCETGDTFARDRSLPPLEAEDLVVFTGAGAYGAVMAS 384 Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 +N + + + D +Y D + Sbjct: 385 EYNSRPLVPEVLVDGDQWAVIRPRPTYEDMLDR 417 >gi|296159586|ref|ZP_06842410.1| diaminopimelate decarboxylase [Burkholderia sp. Ch1-1] gi|295890294|gb|EFG70088.1| diaminopimelate decarboxylase [Burkholderia sp. Ch1-1] Length = 420 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 55/380 (14%), Positives = 120/380 (31%), Gaps = 26/380 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + +A+K + + + + G S E Sbjct: 28 GTPLYVYSRAALTEAWNAYAGACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + E ++ + +A+ + ++ +L++ A Sbjct: 88 LARVLAAGGKAENTVFSGVGKNANEMREALAAGVKCFNVESIPELDRLNAVAAEMGKKAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 + LR+NP V ++ G +D + V G+ H + Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARATYQAAAGMANLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + ++ +I I +GGG+ T D + + ++ ++ Sbjct: 208 EVAPYLDAVDKVLELVEQIEQDGLKIRHIDVGGGLGITYDDETPPEIGEFVRTVLDRIEA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 ++Y EPG ++V N L T V + KN IVD+++ + Sbjct: 268 RGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEKNFAIVDAAMNDLARPAMYEAYHAI 327 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + + V G C +GD G ++ GD ++ Y + +N Sbjct: 328 DPVVKHDVPAHVYDVVGPVCESGDWLGRERLLA-IEPGDLLAIRSAGAYGFVMSSNYNTR 386 Query: 338 NMPTIAVKNVDGTIKAIREF 357 + + T Sbjct: 387 PRAAEVMVDGTQTHVIRARE 406 >gi|21674193|ref|NP_662258.1| diaminopimelate decarboxylase [Chlorobium tepidum TLS] gi|21647356|gb|AAM72600.1| diaminopimelate decarboxylase [Chlorobium tepidum TLS] Length = 416 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 68/386 (17%), Positives = 124/386 (32%), Gaps = 23/386 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ +Q L++ + + ++K + TL + G +S E Sbjct: 29 GTPLFVTSRQSLVSQYRSFEEAFASLPHFTCYSVKANFNLAVIRTLAEEGCGCDVNSGGE 88 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + K S I ++S+L A+ L K + Sbjct: 89 LYRALTAGVPANKIIMAGVGKSEAEIKYGLTSGVMMIKAESISELKAINSVAEHLGKVAQ 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENK 170 +G+RINP+V+ + G + ++GL H + Sbjct: 149 VGVRINPNVTAETHPYITTGDSKEKFGIDEAGLGEVFELFKTLPNLELHGLDMHIGSQIF 208 Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + A + + + H I+W+ LGGG T P+ F ++L + Sbjct: 209 DPEYYVAATQKLLEVLESARHLGFDIKWLDLGGGFPVTYDPQKPAPPITKFAEKLIPMLQ 268 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLYQESATI 281 V + EPG I N + + T +L +N K IVD+ + + L + Sbjct: 269 DKGVTVIFEPGRFIAANASVIVTKILYRKKNQIGKEFFIVDAGMTELIRPALYQSHHEVL 328 Query: 282 YPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + V G C + D F G+ ++ Y + +NG Sbjct: 329 SVKQHDRSVVADVVGPICESSDFFARHRTIDDAPEGELLAVLSSGAYGAVMSSNYNGRLR 388 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + D R +Y N Sbjct: 389 PAEVMVDGDEVTLTRRRETYEQLVQN 414 >gi|222528796|ref|YP_002572678.1| diaminopimelate decarboxylase [Caldicellulosiruptor bescii DSM 6725] gi|222455643|gb|ACM59905.1| diaminopimelate decarboxylase [Caldicellulosiruptor bescii DSM 6725] Length = 433 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 61/402 (15%), Positives = 124/402 (30%), Gaps = 37/402 (9%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 M TP Y++++ + N++ ++ A K F M + G Sbjct: 28 MYGTPLYVMNETMIRENINIFKTSLNKYFGENGLIIYASKAFCTKAMCQIAKEEGIGLDV 87 Query: 58 SSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E+ F + ++ K + + + I+ + +L + + Sbjct: 88 VSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVEKGVKIVLDNFDELEMLSLICRTKN 147 Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164 K + +RI P + + S+ G ++ ++ E N+ GL H Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSIVQKVLQKEELNLVGLHCH 207 Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 + F ML+ + K +I+ + LGGG + ++ E Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKIKNELGYEIKILDLGGGFGIKYTAHDEPPRVEKFIE 267 Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263 + I LEPG +IV T+ ++ E + Sbjct: 268 VITEEVEEFCSLKGLKKPFIVLEPGRSIVGEAGITLYTIGNVKEIPNVRNYVSVDGGMTD 327 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + + + GR C +GDI + +K G ++ Sbjct: 328 NPRYALYQARYDAYVVENPLGQRTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N P + + ++ +Y D N Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQARVIVKRETYEDLVKN 429 >gi|254360888|ref|ZP_04977034.1| diaminopimelate decarboxylase [Mannheimia haemolytica PHL213] gi|261493013|ref|ZP_05989555.1| diaminopimelate decarboxylase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|153092367|gb|EDN73430.1| diaminopimelate decarboxylase [Mannheimia haemolytica PHL213] gi|261311357|gb|EEY12518.1| diaminopimelate decarboxylase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 416 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 118/386 (30%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + + + G S E Sbjct: 26 GTPAYVYSRSTLERHWHAFNNAFGSHPHLVCFAVKSNSNIALLNVMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ +VS+L++ A +L K Sbjct: 86 LERVLAAGGEASKVVFSGVAKSHSEIKRALEVGIRCFNIESVSELHRINQVAGELGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ +P + L++ Sbjct: 206 ELQPFLDATDRLIILMEQLREDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282 +++I +EPG AI N L T V + +N IVD+ + + L Sbjct: 266 YENLEIIIEPGRAITANAGILVTKVEYLKQNEDRNFAIVDTGMNDMIRPALYEAYMQITE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + +N Sbjct: 326 VDKTLNRDKAVYDVVGPICETSDFLGKQRELA-ISEGDLIAIRSAGAYGAAMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + ++ D + Sbjct: 385 QAAEIMVDGNQAHLIKARATFADLWR 410 >gi|114566946|ref|YP_754100.1| diaminopimelate decarboxylase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337881|gb|ABI68729.1| diaminopimelate decarboxylase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 441 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 63/399 (15%), Positives = 123/399 (30%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP ++ID++ N G ++L A K A ++ + Q G S Sbjct: 33 GTPLWIIDEEGFRRNCRNIKKAFSLYGDSQVLYASKTLATMAIYRIVEQEGLGLDVVSGG 92 Query: 62 EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ F + ++ ++ A+ + I+ + +L + + + Sbjct: 93 ELYTALKAGFPMQKVYFHGNNKSREELRMAICAGVARIVVDNFYELELLNQLCTEENCQQ 152 Query: 119 --GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNC 167 LR+ P V + S+ G D + + GL H Sbjct: 153 EILLRVTPGVEAHTHEYIQTGQIDSKFGFTLSDGQAMEGVKKALSMPGIKLVGLHCHIGS 212 Query: 168 ENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + + F M+ + Q+E ++LGGG+ + + Sbjct: 213 QIFAMQSFQYTSSIMMDFWAEIKRTSGCQLEELNLGGGLGIYYVAGDEPRKAEEWAKAVM 272 Query: 224 K-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 +I +EPG AI T+ E V + + Sbjct: 273 PVVQEKARQHGLKVPRIIVEPGRAIAGPAGLTLYTLGSSKEVKGIRKYVAVDGGMTDNPR 332 Query: 271 DYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + + N T + G+ C +GD+ V+ GD ++ Y Sbjct: 333 PALYAAKYQALLANKAEEKPVETVSIAGKCCESGDMLIWDLELPWVEAGDILAVLATGAY 392 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N + + +N + P + + I+ +Y D N Sbjct: 393 NYSMSSNYNRLPRPAMVLVKQGQADLIIKRENYEDLLRN 431 >gi|312794090|ref|YP_004027013.1| diaminopimelate decarboxylase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181230|gb|ADQ41400.1| diaminopimelate decarboxylase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 433 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 59/402 (14%), Positives = 124/402 (30%), Gaps = 37/402 (9%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 M TP Y++++ + N++ + ++ A K F M + G Sbjct: 28 MYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCTKAMCQIAKEEGIGLDV 87 Query: 58 SSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E+ F + ++ K + + + I+ + +L + + Sbjct: 88 VSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVEKGVKIVLDNFDELEMLSLICKTKN 147 Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164 K + +RI P + + S+ G ++ ++ + ++ GL H Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMVQKVLQRQELSLVGLHCH 207 Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 + F ML+ + K Q++ + LGGG + ++ E Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKIKNELGWQVDILDLGGGFGIKYTAHDEPPKIEKFIE 267 Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263 + + LEPG +IV T+ I E + Sbjct: 268 AIAEEVEEFCSLRGLKKPFVVLEPGRSIVGEAGITLYTIGSIKEIPNVRNYASVDGGMTD 327 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + + + GR C +GDI + +K G ++ Sbjct: 328 NPRYALYQARYDAYVVENPLGQRTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N P + + ++ +Y D N Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQARVIVKRETYEDLVRN 429 >gi|205372423|ref|ZP_03225236.1| diaminopimelate decarboxylase [Bacillus coahuilensis m4-4] Length = 444 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + ++ + N +G ++ A K F M + + S Sbjct: 31 GTPLMVYNETVIRQNCREFKQTFDQSGLTYQVAYAGKAFLCMDMVRLVKEEGMSLDVVSG 90 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E ++ K E + + + + +L + A ++ Sbjct: 91 GELYTALQAGFPVERIHFHGNNKSVEELEMGIDAGIGCFVVDNFIELELLHELAAEREQK 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I LR+ P V + S+ G + ++ ++ G+ H Sbjct: 151 VNILLRVTPGVEAHTHDYIMTGQEDSKFGFDVGNGQGKLGVQLALQKPYFHLLGVHSHIG 210 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFC------- 215 + F ++ + + + + +++GGG + Sbjct: 211 SQIFETEGFQYAIEVLARFLQEVHEESDVVMSVLNVGGGFGVRYTEEDEPLPIREYVKSI 270 Query: 216 -QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + +K + I++EPG +IV T + +D + ++ Sbjct: 271 TEAVKFSFGQLCYPTPEIWVEPGRSIVAEAGTTLYKIGTQKNLPGIRKYVAIDGGMTDNL 330 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + G++C +GD+ PV++GD ++ Sbjct: 331 RPALYKARYDALLANRANEERTEVVSIAGKACESGDMLIWDIALPPVRMGDTLAVFSTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N P + + IR SY D N Sbjct: 391 YGYSMANNYNRTPRPAVVFVKEGESRLVIRRESYRDLVRN 430 >gi|300856974|ref|YP_003781958.1| diaminopimelate decarboxylase [Clostridium ljungdahlii DSM 13528] gi|300437089|gb|ADK16856.1| diaminopimelate decarboxylase [Clostridium ljungdahlii DSM 13528] Length = 428 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 61/399 (15%), Positives = 125/399 (31%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV-KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 KTP Y++D++ + + + K+ A K F M +N S Sbjct: 26 KTPLYVMDEELVRDRCRRYYKSFEADKANKVTYAGKAFLTLAMCQIINSEGLYLDVVSDG 85 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ + F E ++ K + + + + ++ K A + Sbjct: 86 ELYTALKSGFPMEKVYFHGNNKTLDEIDMGVKLGVGKFVVDNFYEMEKINSAAKKYGKIQ 145 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNC 167 +I LR+ P + + S+ G K ++ G+ H Sbjct: 146 EILLRVTPGIEAHTHDYIKTGQIDSKFGFTMLNNEVMNIIKSAVDFPNLKFVGIHCHIGS 205 Query: 168 ENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----------- 212 + ML ++K ++E + LGGG + Sbjct: 206 QIFETKPYEDEVEIMLNLVKKIKDELGREVEELDLGGGFGIYYTEGDKPKSVEDFCSIIL 265 Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 + + + + +EPG +I+ N T TV I V + ++ Sbjct: 266 QKAKEKAKELDLKLPILVIEPGRSIIGNAGTTLYTVGSIKNIPGVRKYVSVDGGMADNIR 325 Query: 271 DYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + + ++ T + G+SC +GDI + + GD ++ Y Sbjct: 326 PALYGAKYECVLANRVNDSVKETVTIAGKSCESGDILIKDVELPESRSGDILAVFTTGAY 385 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N I P + + +++D N Sbjct: 386 GYSMSSNYNKIPKPAAVLVKEGKARLIAKRQTFDDLIEN 424 >gi|303244558|ref|ZP_07330892.1| diaminopimelate decarboxylase [Methanothermococcus okinawensis IH1] gi|302485106|gb|EFL48036.1| diaminopimelate decarboxylase [Methanothermococcus okinawensis IH1] Length = 438 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 68/400 (17%), Positives = 140/400 (35%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++ + +++ N + K K + A K + + L++ G Sbjct: 31 GTPLYVMSESQIVKNFTRYVEAFKEYTEKTGKEFIVGYAYKANSNLAITRLLSKLGCGAD 90 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQK 113 S E+ E +N K + + N + +++S+L + A++ Sbjct: 91 VVSGGELYTAKLSNVPSEKIVFNGNCKTKDEIIMGIEANIRSFNVDSISELILINETAKE 150 Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162 + K + RINP+V+ ++ G + + E N+ G+ Sbjct: 151 MGKVANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMAKDMENVNIVGVH 210 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFC 215 H + F+ + + + E +I+ ++LGGG+ + KD Sbjct: 211 CHIGSQLTDITPFIEETRKVMDFVVELKKEGIKIKDVNLGGGLGIPYDKNTEIPTQKDLA 270 Query: 216 QRLKEFSEKYS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHV 269 + +Y + LEPG ++V L V I E ++VD+ + + Sbjct: 271 NAIINTMMEYKDKIELPNLILEPGRSLVATAGVLLGKVHHIKETPVAKWIMVDAGMNDMM 330 Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + I + G C + D+FG+ +++ D ++ DV Sbjct: 331 RPAMYDAYHEITPCIIRNENKKEVVNIAGGLCESSDVFGKDRELPKIEVNDIVAILDVGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I+ N +N P + + + G +Y D + Sbjct: 391 YGISMANNYNARGRPRMILTSEKGVYIIRERETYADLLSK 430 >gi|268680756|ref|YP_003305187.1| carboxynorspermidine decarboxylase [Sulfurospirillum deleyianum DSM 6946] gi|268618787|gb|ACZ13152.1| carboxynorspermidine decarboxylase [Sulfurospirillum deleyianum DSM 6946] Length = 380 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 133/369 (36%), Positives = 204/369 (55%), Gaps = 7/369 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+ ++ L NL + + +G +LLALK FA + ++ Y+ G T S L+ Sbjct: 13 INTPAYVCEEALLEENLKLLKEVSERSGATILLALKGFAFKALAPLVDTYLSGCTCSGLH 72 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E F G Y+ AYK+ +ID V++ + +IFN+ +Q K+K KA GLR Sbjct: 73 EAKFAKEFFKGSVCTYSPAYKEEDIDEVIALSEHLIFNSFNQWEKYKHKAMGKTS-CGLR 131 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS S L +P +SRLG ++ +++ + GL FH CE A+LK Sbjct: 132 LNPEVSSSPVDLYNPCGLYSRLGITKENMQYDKLEGIEGLHFHALCEQD-ADALEAVLKG 190 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240 E+ FG I++++WI+ GGG H T + Y V+ F +++F E+++ +YLEPGEA+ Sbjct: 191 FEERFGELISRMKWINFGGGHHITREGYDVEKFITLIRDFRERHNDITVYLEPGEAVGWQ 250 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 T L +VLDI N ++ I+D S EAH+PD L A I P+ + G + Sbjct: 251 TGPLVASVLDIVHNGMDIAILDISAEAHMPDTLAMPYRAQIRGAGELGEKPHVYRLGGPT 310 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 CLAGDI G++ F+ P+ IGD++ FED+ Y I + FNG+ +P +AV DG + + Sbjct: 311 CLAGDIMGDYTFDAPLHIGDKLIFEDMIHYTIVKNTTFNGVKLPDLAVLRKDGAYEVVSH 370 Query: 357 FSYNDYYNN 365 F Y++Y Sbjct: 371 FGYDEYKRR 379 >gi|193212450|ref|YP_001998403.1| diaminopimelate decarboxylase [Chlorobaculum parvum NCIB 8327] gi|193085927|gb|ACF11203.1| diaminopimelate decarboxylase [Chlorobaculum parvum NCIB 8327] Length = 431 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 69/386 (17%), Positives = 121/386 (31%), Gaps = 23/386 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ +Q L++ ++K + TL G +S E Sbjct: 44 GTPLFVTSRQSLISQYRAFEEAFAALPHFTCYSVKANFNLEVIRTLAAEGCGCDVNSGGE 103 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHK--K 117 + E K E N I + ++L A +L K + Sbjct: 104 LYRALKAGVPAEKIIMAGVGKTEEEIEYGLNSGVMMIKAESTAELKAINRVAARLGKVAQ 163 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENK 170 +G+R+ P+V+ + G ++GL H + Sbjct: 164 VGVRVTPNVTAETHPYITTGDSKEKFGIDEAGLAEVFDLFKALTNLELHGLDMHIGSQIF 223 Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + A + + + H I+W+ LGGG T P+ F ++L + Sbjct: 224 DPEYYVAATQKLLEVLESARHLGFDIKWLDLGGGFPATYDPQKPATPITKFAEKLIPMLD 283 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLYQESA-- 279 V + EPG I N++ L T +L +N K IVD+ + + L Sbjct: 284 DKGVTVIFEPGRFIAANSSVLVTKILYRKKNHAGKEFFIVDAGMTELIRPALYQSHHEVL 343 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T+ + A V G C + D F G+ ++ Y +NG Sbjct: 344 TVKQHDKSVVADVVGPVCESSDFFVRHRTIGDAPEGELLAVLSSGAYGAVMGTNYNGRRR 403 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + R +Y N Sbjct: 404 PAEVMVDGSEAKLIRRRETYEQLVQN 429 >gi|157738336|ref|YP_001491020.1| diaminopimelate decarboxylase [Arcobacter butzleri RM4018] gi|157700190|gb|ABV68350.1| diaminopimelate decarboxylase [Arcobacter butzleri RM4018] Length = 402 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 64/383 (16%), Positives = 124/383 (32%), Gaps = 21/383 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TPYY+ D + N + + + A+K + + L G S+ E Sbjct: 13 QTPYYVYDFNYITNQYEELKSAFRARKSLIAYAVKANSNLSVIKHLANLGAGADCVSIGE 72 Query: 63 VMLGHE-KFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119 V + ++ D EI L I + ++L + + A++L K Sbjct: 73 VKRALKVGIPSYKIIFSGVGKIDDEIRQALELDILMINVESDAELQRVEIIAKELGKVAR 132 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC--- 167 + R+NP++ ++ G I+ G+ H Sbjct: 133 ISIRVNPNIDPKTHPYISTGLHENKFGVDIDTAKRMYIQCKNSDFLDPVGIHCHIGSQLT 192 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 E + ++ ++ + ++ +I +GGG+ KD ++ Q + E Sbjct: 193 ELQPIKEAVKIVADLVRNLKAIKIELSFIDIGGGLGIIYKDEKLIDTYEYAQSILETMFG 252 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL--YQESATI 281 + I EPG I+ N+ T VL K VIVD ++ + L Y + Sbjct: 253 LDITIICEPGRFIIGNSGIFVTKVLYEKINGNKRFVIVDGAMNDLIRPALYNAYHRIEVL 312 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 N + G C +GD F + + D ++ Y + +N Sbjct: 313 NDNQDFSDCNLVGPVCESGDFFAKNIQLPKTEHNDLVAIYSAGAYGFTMSSNYNTRGKVA 372 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + ++ D Sbjct: 373 EIAIEDGKDRLIRKRETFEDLIA 395 >gi|222099950|ref|YP_002534518.1| Diaminopimelate decarboxylase [Thermotoga neapolitana DSM 4359] gi|221572340|gb|ACM23152.1| Diaminopimelate decarboxylase [Thermotoga neapolitana DSM 4359] Length = 395 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 59/375 (15%), Positives = 118/375 (31%), Gaps = 17/375 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ + + + A+K + L + G + E Sbjct: 21 GTPLYVYFEETIRERARRVKEVFHGINLLPTFAVKANNNPNLLAILKEEGFGMDVVTKGE 80 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + +N K + + + TI ++ ++ ++ + + Sbjct: 81 LFAARLAGVDPFLIVWNGNGKSKEEMLHFLKEGVRTINVDSFEEMEMWESLSPE-DVNFF 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLCF 175 +R+NP V + G N+ GL H + F Sbjct: 140 VRVNPEVDARTHPHISTGLKKHKFGIPLNMLDSFMKRFKGMNIKGLHVHIGSQITKVDPF 199 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE-FSEKYSVQIYLEPG 234 + + + + E I++GGG + + R K ++++E G Sbjct: 200 LEAYEKVVEASRRYG--FEEINIGGGWGIDYQGEELNVQEYREKVVPLLDGFKRVFVEIG 257 Query: 235 EAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP---YTA 290 I+ L V+ + K V+VD + + LY I+ + A Sbjct: 258 RYIIAPAGFLVLKVILVKRGENKVFVVVDGGMNTLIRPA-LYSAHHRIFVYGKEGSDFKA 316 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350 V G C +GD+ V+ GD + E+ Y N +N + P + DG Sbjct: 317 DVVGPLCESGDVIAYDRNLPAVEPGDFLFVENAGAYGYTMANNYNSTSKPAEVLVKKDGE 376 Query: 351 -IKAIREFSYNDYYN 364 + R + D + Sbjct: 377 LVLIRRRENIMDIFK 391 >gi|134096284|ref|YP_001101359.1| diaminopimelate decarboxylase [Herminiimonas arsenicoxydans] gi|133740187|emb|CAL63238.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Herminiimonas arsenicoxydans] Length = 427 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 124/397 (31%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG-----VKLLLALKCFAAWGMFDTLNQYMDGTTS 57 +P Y+ K L+ N + K G + ++K + + L + G Sbjct: 26 GSPTYIYSKAALVENFSSYADACKKHGRTDDTALVCYSVKSNSNLAVLQLLGKLGSGFDI 85 Query: 58 SSLYEVMLGHE--KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--Q 112 S E++ + V ++ A+ + ++ +L++ + A Sbjct: 86 VSGGELLRVLAAGGSPRKVIFSGVGKSREEMQLALSHDILCFNVESIPELHRLNEVAGEM 145 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHN 165 + LR+NP+V ++ G +D + + V G+ H Sbjct: 146 GKRASVSLRVNPNVDAKTHPYISTGLKDNKFGVAYEDALTTYRVASALPNISVVGIDCHI 205 Query: 166 NCENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKD--------YPVKDF 214 + + + I + +GGGI + Y + F Sbjct: 206 GSQLLDDAPLLEAVDKLIELIDALAAEGIVIHHLDIGGGIGINYDNDKPVAVGDYLARVF 265 Query: 215 CQRLKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVP 270 + ++ ++ EPG +IV N L T V I KN IVD+++ + Sbjct: 266 AKVDAWRAKNHAGAPIKVLFEPGRSIVGNAGILLTEVQYIKHGETKNFAIVDAAMNDLMR 325 Query: 271 DYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + + T V G C +GD ++ GD ++ Y Sbjct: 326 PAMYEAWHGVQPVLQRHVAAQTYDVVGPVCESGDWLARSRELA-IQEGDLLAIMSAGAYG 384 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + +D + Sbjct: 385 MTMSSNYNTRGRAAEVMVDGATVHLIRKRELASDLFA 421 >gi|51247766|pdb|1TWI|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase From M. Jannaschii In Co-Complex With L-Lysine gi|51247767|pdb|1TWI|B Chain B, Crystal Structure Of Diaminopimelate Decarboxylase From M. Jannaschii In Co-Complex With L-Lysine gi|51247768|pdb|1TWI|C Chain C, Crystal Structure Of Diaminopimelate Decarboxylase From M. Jannaschii In Co-Complex With L-Lysine gi|51247769|pdb|1TWI|D Chain D, Crystal Structure Of Diaminopimelate Decarboxylase From M. Jannaschii In Co-Complex With L-Lysine Length = 434 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 72/398 (18%), Positives = 136/398 (34%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN------AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++ ++++ N + + K + A K A + L + G Sbjct: 29 GTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANLAITRLLAKLGCGAD 88 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQK 113 S E+ + + +N K E + N +++S+L + A++ Sbjct: 89 VVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKE 148 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162 L + RINP+V+ ++ G + +E E NV G+ Sbjct: 149 LGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEYVNVVGVH 208 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216 H + F+ + + + E +IE ++LGGG+ + Sbjct: 209 CHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQKDLA 268 Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV 269 LK + + LEPG ++V L V I E V++D+ + + Sbjct: 269 DAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMM 328 Query: 270 PDYLLYQESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + I + G C + D+FG V++GD ++ DV Y Sbjct: 329 RPAMYEAYHHIINCKVKNEKEVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYG 388 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 I+ N +N P + + + G +Y D Sbjct: 389 ISMANNYNARGRPRMVLTSKKGVFLIRERETYADLIAK 426 >gi|154151636|ref|YP_001405254.1| diaminopimelate decarboxylase [Candidatus Methanoregula boonei 6A8] gi|154000188|gb|ABS56611.1| diaminopimelate decarboxylase [Methanoregula boonei 6A8] Length = 430 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 62/391 (15%), Positives = 126/391 (32%), Gaps = 31/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ + ++ + A V++L A K + L + G S Sbjct: 29 GTPLYVTSEDRICEHFTAYQSALSRRYAKVQVLFAAKANGNLAVMRALARLGAGADVFSS 88 Query: 61 YEVMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E+ L E +N + ++ + + + +++ +L++ A K Sbjct: 89 GELALALEAGMPASKLLFNGSSKTPADLALAVKHGVKVSLDSLDELHQLDAIAANAGKVA 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169 +I R+NP++ S+ G + + + + G+ H + Sbjct: 149 EISFRVNPALEVPTHPKIATGLATSKFGIPHEQIPAAYKEALACKNVKPVGIHCHIGSQI 208 Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQRLKEF 221 + F+ + + KE ++E++ LGGG+ D+ + Sbjct: 209 LDVVPFARAAEVMVRIAKEISDIGVKLEFLDLGGGLGIPYHHDTDPAPTPEDYAAAVMPV 268 Query: 222 SEK------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275 + + +++EPG +V ++T L T V K VD+ + + Sbjct: 269 FLEGIEKAGITPSLWVEPGRFLVADSTVLLTRVNSTKAAHKRFANVDAGFNLLIRPAMYD 328 Query: 276 QESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 I N + G C GDI + GD I+ D Y Sbjct: 329 SYHEIIVANRADAPHTTEYTITGPICETGDILAADRKLPELAAGDLIAVLDAGAYGYAMS 388 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + +NG + + R + D Sbjct: 389 SQYNGRPRCPEILIHGKEETLMRRPETLADL 419 >gi|256810722|ref|YP_003128091.1| diaminopimelate decarboxylase [Methanocaldococcus fervens AG86] gi|256793922|gb|ACV24591.1| diaminopimelate decarboxylase [Methanocaldococcus fervens AG86] Length = 436 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 72/398 (18%), Positives = 133/398 (33%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN------AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++ ++++ N + + K + A K A + L++ G Sbjct: 31 GTPLYVMSEEQIKINYNKYIEAFKRWEEETGKEFIVAYAYKANANLAITKLLSKLGCGAD 90 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQK 113 S E+ + E +N K E + N +++S+L + A++ Sbjct: 91 VVSGGELYIAKLSNVPSEKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKE 150 Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162 L K + RINP+V ++ G + +E + NV G+ Sbjct: 151 LGKVANVAFRINPNVDPKTHPKISTGLKKNKFGLDVESGIALKAIKMALEMDNVNVVGVH 210 Query: 163 FHNNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216 H + F + + +I ++LGGG+ + + Sbjct: 211 CHIGSQLTDVSPFIEATEKVMDFVVKLKEEGIEIRDVNLGGGLGIPYEKDKKVPTQKDLA 270 Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV 269 LK + + LEPG ++V L V I E V+VD+ + + Sbjct: 271 DAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGRVHHIKETPITKWVMVDAGMNDMM 330 Query: 270 PDYLLYQESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + I + G C + D+FG ++GD ++ DV Y Sbjct: 331 RPAMYDAYHHIINCKVKDEKEVVSIAGGLCESSDVFGRDREIDKPEVGDVLAIFDVGAYG 390 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 I+ N +N P + + + G SY D Sbjct: 391 ISMANNYNARGRPRMVLTSKKGVFLIRERESYADLIAK 428 >gi|194334306|ref|YP_002016166.1| diaminopimelate decarboxylase [Prosthecochloris aestuarii DSM 271] gi|194312124|gb|ACF46519.1| diaminopimelate decarboxylase [Prosthecochloris aestuarii DSM 271] Length = 416 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 126/385 (32%), Gaps = 23/385 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP +++ + L+ + ++K + L+ G +S E+ Sbjct: 30 TPLFVVSRNALVEQYRAFEEAFSSLSHFTCYSVKANFNIHVIKALSDQGCGCDVNSGGEL 89 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKAQKL--HKKI 118 + K + + ++S+L + A++L + Sbjct: 90 FRALKAGVDPQKIIMAGVGKSDQDIEYALQSGIFMLKAESLSELRHIEAVARRLGVTASV 149 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENKSFL 173 G+RINP+V+ + G + +K+VN + + ++ F Sbjct: 150 GVRINPNVTAETHPYITTGDSKEKFGIDEGSLDEMFDLFKSMKHVNFMCLDMHIGSQIFD 209 Query: 174 CFSAMLK-----NIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 ++ I+++ +GGG T + P++ F L +K Sbjct: 210 TEFYHAATEKLLDVLDAARAKGFSIDYLDIGGGFPVTYEPQKPATPIEQFASVLIPVLKK 269 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLL--YQESAT 280 I EPG I N+ + T VL N K VIVD+ + + L Y E Sbjct: 270 TGTTIIFEPGRFIAANSGVMVTKVLYRKRNHIGKEFVIVDAGMTELIRPALYQSYHEIIG 329 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + A V G C +GD F V G+ ++ Y N +NG P Sbjct: 330 VKQQEATIVADVVGPVCESGDFFARGRTIDAVGEGEYLAILSAGAYGAVMSNNYNGRLRP 389 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + T + ++ N Sbjct: 390 AEVMVDNGRTSLIRKRDTFEQLIEN 414 >gi|182418166|ref|ZP_02949466.1| diaminopimelate decarboxylase [Clostridium butyricum 5521] gi|237666166|ref|ZP_04526153.1| diaminopimelate decarboxylase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377984|gb|EDT75524.1| diaminopimelate decarboxylase [Clostridium butyricum 5521] gi|237658256|gb|EEP55809.1| diaminopimelate decarboxylase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 431 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P Y+ D++ + + ++ A K F M L + S Sbjct: 29 GSPLYVFDEELIREYCRDYRNYFRCEENNNRVAFAGKAFLTVQMCKLLKEENMSLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E ++ K + V + + ++ D A Sbjct: 89 GELYTAYKAGFPLERVMFHGNNKTLDEIELGVKLGVGNFVVDNHYEMEVLNDIAKSYGKT 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + I LRI P + + S+ G + + I E N+ G+ H Sbjct: 149 QNIYLRITPGIEAHTHDYIKTGQIDSKFGFAPVGTVIEDAVEKAINLENINLAGIHCHIG 208 Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---------- 212 + + ML ++K + I+ + GGG Sbjct: 209 SQIFELQPYEDAVEVMLALVKKIQENHGYFIKEVDFGGGFGIYYNKGDKPRTTREYCETI 268 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + + + +EPG +IV N + TV + E V + ++ Sbjct: 269 INKVDEVCRRTGQERPILTIEPGRSIVANAGSTLYTVGSVKEIPGVRTYVAVDGGMTDNI 328 Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + G T + G+ C +GDI E V GD ++ Sbjct: 329 RPALYNSAYECVIANRVNSEGGQTVTIAGKCCESGDILLENVELPEVTSGDILAILTTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N I P + + + SY D N Sbjct: 389 YGYSMSSNYNRIPKPAVVMIRDGQARLVCKRESYEDIIRN 428 >gi|254780371|ref|YP_003064784.1| diaminopimelate decarboxylase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040048|gb|ACT56844.1| diaminopimelate decarboxylase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 431 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 119/389 (30%), Gaps = 25/389 (6%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +++TP+Y + N T + ALK + + TL G S Sbjct: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 Query: 61 YEVMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ E ++ K D A+ S + S+L +A L Sbjct: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168 I R+NP ++ + + + G ++G+ H + Sbjct: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 Query: 169 NKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEF 221 F K + ++ I+ I +GGG+ + + ++ Sbjct: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--YQES 278 +I LEPG +V + L T V+ I ++ ++ D ++ + L Y E Sbjct: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 Query: 279 ATIYPNTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I G A + G C GD + GD + E Y + +N Sbjct: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + N ++ + Sbjct: 384 SRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 >gi|154245684|ref|YP_001416642.1| diaminopimelate decarboxylase [Xanthobacter autotrophicus Py2] gi|154159769|gb|ABS66985.1| diaminopimelate decarboxylase [Xanthobacter autotrophicus Py2] Length = 422 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 59/389 (15%), Positives = 115/389 (29%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP+Y L + + V L ALK + + TL + G S Sbjct: 25 VRTPFYCYSSATLERHYQVFMEAFSGRDVLLCYALKANSNQSVIATLARLGAGADIVSAG 84 Query: 62 EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ E ++ ++ A+ + +L + A + Sbjct: 85 ELARARAAGVPAERIVFSGVGKTREEMAAALDGGILCFNVESEPELAALSEVATAMGVSA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + +R+NP V + ++ G E + G+ H + Sbjct: 145 PVSIRVNPDVDAKTHKKISTGKSATKFGIPISRAREVYDYAARLPGLAITGVDMHIGSQI 204 Query: 170 K---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-----DYPVKDFCQRLKEF 221 F +L + ++ ++ + LGGG+ P + + + Sbjct: 205 TDMAPFDNAVTLLAELARDLLAAGHRLHHMDLGGGLGVPYAASDPVPPPPSAYAEVVSRA 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + E G +V N L T V+ + E K V+VD+++ + L Sbjct: 265 LGDLKLPLVFEMGRMLVANAGILVTRVIYVKEGEGKTFVVVDAAMNDLIRPTLYEAHHDI 324 Query: 281 IYPNTGPYTAM-----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I A V G C GD +K GD ++ Y + + +N Sbjct: 325 IPVVEPAADAPLVVADVVGPVCETGDFLALDRPLPRLKAGDLLAVMTAGAYGAVQASTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D Sbjct: 385 TRPLVPEVLVRGAAAAVVRPRLEVADLIA 413 >gi|312129772|ref|YP_003997112.1| diaminopimelate decarboxylase [Leadbetterella byssophila DSM 17132] gi|311906318|gb|ADQ16759.1| diaminopimelate decarboxylase [Leadbetterella byssophila DSM 17132] Length = 419 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 57/386 (14%), Positives = 118/386 (30%), Gaps = 26/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + ++ K +K+ A K + + + S E Sbjct: 31 GTPLYVYDGDVIAAKVERLRAAFKEVNMKIKYACKANTNISVLALMKKLGVDIDVVSPQE 90 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + L F E + + + N + + +S L KF K + Sbjct: 91 MKLALSAGFSPEQITFTSSGVGFDEIEACVNEGVLVNIDNLSTLEKFGQKYGSSLPVF-I 149 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174 RI P+V+ S+ G + + + GL H + K Sbjct: 150 RIRPNVAGGGNEKISTGHGNSKFGIPIEQKGEILKLVNKYQLRIVGLHQHTGSDIKDGST 209 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFSEKYS 226 F + + E ++++ GGG K+ V+ R K F Y Sbjct: 210 FVQAAEVM-FELAKDFDNLQYLDFGGGFKVPYKEGDVETDMEDLGVQLSARFKAFCASYG 268 Query: 227 VQI--YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283 ++ + EPG+ +V+ + L +V + N ++ ++ + + + Sbjct: 269 RELELWFEPGKYLVSESGLLLASVNVVKNNPNGTLLGLNTGLNHLIRPMMYDAYHGVYNI 328 Query: 284 NTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C D + + GD ++ + Y + +N Sbjct: 329 SKAKEEASKRYNIVGYMCETDD-IAKDRTLPETEEGDIMAIRNAGAYGFTMASNYNSRFR 387 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + + + D N Sbjct: 388 PAEVLYYQGKSHLVRKRETMEDILKN 413 >gi|302389700|ref|YP_003825521.1| diaminopimelate decarboxylase [Thermosediminibacter oceani DSM 16646] gi|302200328|gb|ADL07898.1| diaminopimelate decarboxylase [Thermosediminibacter oceani DSM 16646] Length = 442 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 125/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + N + ++ A K F M + Q S Sbjct: 29 GTPLYVMDESHIRQNCRLYRETLNSLHPDSGVIYAGKAFLTMNMCRIVEQEGLYLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ + F E ++ K + A+ N I+ + ++ D +KL Sbjct: 89 GELYVAIKAGFPAEKIYFHGNNKSYEELKMAIDYNVGHIVVDNFHEMEMLNDLTKKLRHR 148 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I LRI+P + + S+ G + + + G H Sbjct: 149 VNILLRISPGIEAHTHDYIKTGQLDSKFGFGLENGQAMMAVDRALGIKGVRLVGFHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F + + K F I + GGG + Sbjct: 209 SQIFETEPFELAAELMMKFVKSVKSRFGHGIRQLDFGGGFGVKYTEEDKPLHPREYLMTL 268 Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K ++ + + +I +EPG AIV T+ I + V + ++ Sbjct: 269 VESVKRWARELNVAVPRILVEPGRAIVGPAGITLYTIGAIKDIPGVRKYVSVDGGISDNI 328 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N T + G+ C +GD+ V GD ++ Sbjct: 329 RPALYGARYSAVLANKAGMPVEETVSIAGKCCESGDMLIWDIKLPRVSTGDILAVFCTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y+ + + +N I P + ++ +Y D N Sbjct: 389 YHYSMASNYNMIPRPAVVFVRDGIARLVVKRETYKDLLRN 428 >gi|154252052|ref|YP_001412876.1| diaminopimelate decarboxylase [Parvibaculum lavamentivorans DS-1] gi|154156002|gb|ABS63219.1| diaminopimelate decarboxylase [Parvibaculum lavamentivorans DS-1] Length = 422 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 121/385 (31%), Gaps = 26/385 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+Y L + + K ++ ++K + + TL + G S Sbjct: 25 IGTPFYCYSSATLERHYEVFAGAFKGQPARVCYSVKANSNLAVIATLARLGAGADVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LHK 116 E+ E ++ K A + D + +L + A L Sbjct: 85 ELRRALAAGIPAEKIVFSGVGKTEAEMAFALETGIDQFNVESEPELELLAELAAARGLTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 ++ +R+NP V + ++ G K E + G+ H + Sbjct: 145 QVAIRVNPDVDAKTHEKIATGKAENKFGISWKRAPAVYARARELKGVKACGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 + F+A + + +I I LGGG+ + ++ +K Sbjct: 205 TALEPFAAAFERVAGMVEALRAEGHEITHIDLGGGLGIPYRGDNDVPPHPDEYAAMVKRT 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESAT 280 ++ EPG I N L + V+ + +IVD+++ + L Sbjct: 265 IGHLGCELTFEPGRLIAGNAGILVSRVIYEKQGDDRAFLIVDAAMNDLIRPTLYDAFHDI 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C GD F + +K GD ++ Y+ + + +N Sbjct: 325 RPVTEPAEGAARVSYDVVGPVCETGDFFAKARELPRLKSGDLVAIMSAGAYSAVQASTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYN 360 + + + SY+ Sbjct: 385 TRPLVPEVMVKGATFQEVRARPSYD 409 >gi|302871382|ref|YP_003840018.1| diaminopimelate decarboxylase [Caldicellulosiruptor obsidiansis OB47] gi|302574241|gb|ADL42032.1| diaminopimelate decarboxylase [Caldicellulosiruptor obsidiansis OB47] Length = 433 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 63/402 (15%), Positives = 125/402 (31%), Gaps = 37/402 (9%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 M TP Y++++ + N++ + ++ A K F M + G Sbjct: 28 MYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCTKAMCRIAKEEGIGLDV 87 Query: 58 SSLYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E+ F + ++ E++ + I+ + +L+ + + Sbjct: 88 VSGGELYTALSVNFEPDKIFFHGNNKVYDELEMAVDKGVKIVLDNFDELDMLSLICKTKN 147 Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164 K + +RI P + + S+ G ++ ++ E N+ GL H Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMVQKVLQKEELNLIGLHCH 207 Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 + F ML+ + K +IE + LGGG + ++ E Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKLKNELGCEIEILDLGGGFGIKYTAHDEPPKIEKFIE 267 Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263 + I LEPG +IV T+ I E + Sbjct: 268 AIAEEVEEFCSLRGLKKPFIVLEPGRSIVGEAGITLYTIGSIKEIPNVRNYASVDGGMTD 327 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + + + GR C +GDI + +K G ++ Sbjct: 328 NPRYALYQARYDAYVVENPLGERTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N P + + ++ +Y D N Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQAKVIVKRETYEDLVRN 429 >gi|15669285|ref|NP_248090.1| diaminopimelate decarboxylase LysA [Methanocaldococcus jannaschii DSM 2661] gi|2499349|sp|Q58497|DCDA_METJA RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|1591741|gb|AAB99100.1| diaminopimelate decarboxylase (lysA) [Methanocaldococcus jannaschii DSM 2661] Length = 438 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 72/398 (18%), Positives = 136/398 (34%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN------AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++ ++++ N + + K + A K A + L + G Sbjct: 33 GTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANLAITRLLAKLGCGAD 92 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQK 113 S E+ + + +N K E + N +++S+L + A++ Sbjct: 93 VVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKE 152 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162 L + RINP+V+ ++ G + +E E NV G+ Sbjct: 153 LGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEYVNVVGVH 212 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216 H + F+ + + + E +IE ++LGGG+ + Sbjct: 213 CHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQKDLA 272 Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV 269 LK + + LEPG ++V L V I E V++D+ + + Sbjct: 273 DAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMM 332 Query: 270 PDYLLYQESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + I + G C + D+FG V++GD ++ DV Y Sbjct: 333 RPAMYEAYHHIINCKVKNEKEVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYG 392 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 I+ N +N P + + + G +Y D Sbjct: 393 ISMANNYNARGRPRMVLTSKKGVFLIRERETYADLIAK 430 >gi|298293363|ref|YP_003695302.1| diaminopimelate decarboxylase [Starkeya novella DSM 506] gi|296929874|gb|ADH90683.1| diaminopimelate decarboxylase [Starkeya novella DSM 506] Length = 422 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 58/381 (15%), Positives = 115/381 (30%), Gaps = 26/381 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + +A L ALK + + T + G S Sbjct: 25 VGTPFYAYSTATLERHYKVFTEAFADARATLCYALKANSNQAVIATFAKLGAGADIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ ++ ++ A+ + + +L + A + Sbjct: 85 ELKRALAAGIAPHKIVFSGVGKTREEMAAALDAGVMCFNVESEPELLTLSEVAVSHGVAA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I +R+NP V + ++ G E + G+ H + Sbjct: 145 PISVRVNPDVDAKTHHKISTGKSENKFGIPISRAREVYRHAAALPGIRITGVDMHIGSQI 204 Query: 170 KSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQRLKEF 221 F + ++ ++ + LGGG+ + + + +K Sbjct: 205 TDLTPFDNATALLVELARDLMADGHRLTHLDLGGGLGVPYVAGDPEPPLPLHYAELVKRH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + + E G +V N L T VL + E K VIVD+++ + L Sbjct: 265 THNLGLGLVFEIGRMLVANAGILVTRVLYVKEGEGKRFVIVDAAMNDLIRPTLYDAHHEI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + A V G C +GD P+K GD ++ Y + + +N Sbjct: 325 LPVREAKSGEGQIVADVVGPVCESGDFLALGRRLPPLKAGDLVAVMTTGAYGAVQASTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIRE 356 + + + Sbjct: 385 TRPLVPEVLVKGEQFALVRPR 405 >gi|312134674|ref|YP_004002012.1| diaminopimelate decarboxylase [Caldicellulosiruptor owensensis OL] gi|311774725|gb|ADQ04212.1| diaminopimelate decarboxylase [Caldicellulosiruptor owensensis OL] Length = 433 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 63/402 (15%), Positives = 125/402 (31%), Gaps = 37/402 (9%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 + TP Y++++ + N++ + ++ A K F M + G Sbjct: 28 VYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCTKAMCRIAKEEGIGLDV 87 Query: 58 SSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E+ F ++ K + + + I+ + +L+ + + Sbjct: 88 VSGGELYTALSVNFEPNKIFFHGNNKTYDELEMAVDKGVKIVLDNFDELDMLSLICKTKN 147 Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164 K + +RI P + + S+ G ++ ++ E N+ GL H Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMVQKVLQKEELNLVGLHCH 207 Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 + F ML+ + K +IE + LGGG + ++ E Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKLKNELGCEIEILDLGGGFGIKYTAHDEPPRIEKFIE 267 Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263 + I LEPG +IV T+ I E K + Sbjct: 268 AIAEEVEEFCSLRGLKKPFIVLEPGRSIVGEAGITLYTIGSIKEIPKVRNYASVDGGMTD 327 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + + + GR C +GDI + +K G ++ Sbjct: 328 NPRYALYQARYDAYVVENPLGERTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N P + + ++ +Y D N Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQAKVIVKRETYEDLVRN 429 >gi|89901687|ref|YP_524158.1| diaminopimelate decarboxylase [Rhodoferax ferrireducens T118] gi|89346424|gb|ABD70627.1| diaminopimelate decarboxylase [Rhodoferax ferrireducens T118] Length = 433 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 119/384 (30%), Gaps = 26/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ K +L L V++ A+K A G+ + G S + Sbjct: 34 GTPLFVYSKSAMLAALAAYQRGFAGRNVQICYAMKANPALGVIQVFAEAGCGFDIVSGGD 93 Query: 63 VMLGHEKFG-GETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + G E ++ K A+ + + ++L + A + Sbjct: 94 MDRVLAAGGRAEKIIFSGVGKTRAEMRRALRAGIGCFNVESEAELEVLSEVALSMGVAAP 153 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170 + +R+NP+V S+ G + + + + V G+ H + Sbjct: 154 VSIRVNPNVDPKTHPYISTGLKDSKFGVAHERVLPTYQRAVKLAGVRVVGIDCHIGSQIT 213 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + + + I GGG+ D ++ + Sbjct: 214 QEGPYLDAVDRMLDLVEAIEAAGIPLHHIDFGGGLGIDYHGETPPDAGLLWQKLLARLDA 273 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + +EPG ++V N + VL + KN I+D+++ + Sbjct: 274 RGFGQRHLMIEPGRSLVGNAGVCLSEVLYLKPGEQKNFCIIDAAMNDLPRPAMYQAFHQI 333 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 P T V G C +GD G V+ GD ++ Y ++ + +N Sbjct: 334 VPLNRRPGAPDTYDVVGPICESGDWIGHDRSLA-VQPGDLLAVLSAGAYCMSMASNYNSR 392 Query: 338 NMPTIAVKNVDGTIKAIREFSYND 361 + + + + D Sbjct: 393 GRAAEILVDGAQAYVIRQRETIAD 416 >gi|261403462|ref|YP_003247686.1| diaminopimelate decarboxylase [Methanocaldococcus vulcanius M7] gi|261370455|gb|ACX73204.1| diaminopimelate decarboxylase [Methanocaldococcus vulcanius M7] Length = 438 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 71/398 (17%), Positives = 136/398 (34%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN------AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++ ++++ N + + K + A K A + L++ G Sbjct: 33 GTPLYVMSEEQIKINYNKYIEAFKRWEEETGKEFVVAYAYKANANLAITRLLSKLGCGAD 92 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113 S E+ + +N K E + +++S+L + A++ Sbjct: 93 VVSGGELYIAKLSNVPSRKIVFNGNCKTKEEIIMGIETKIRSFNVDSISELILINETAKE 152 Query: 114 LHKKIGL--RINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162 L + + RINP+V+ ++ G + E E NV G+ Sbjct: 153 LGETANIAFRINPNVNPKTHPKISTGLKKNKFGLDVESGVALKAIKMATEMEHVNVVGVH 212 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFC 215 H + F+ + + + E +IE ++LGGG+ + KD Sbjct: 213 CHIGSQLTDISPFIEEARKVMDFVVELKKEGIEIEDVNLGGGLGIPYEKDKQIPTQKDLA 272 Query: 216 QRLKEFSEKY-----SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV 269 + +Y + LEPG ++V L V I E V++D+ + + Sbjct: 273 DAIINTLLEYKDKVEMPNLILEPGRSLVATAGYLLGRVHHIKETPITKWVMIDAGMNDMM 332 Query: 270 PDYLLYQESATIYPN--TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + I + G C + D+FG ++GD ++ DV Y Sbjct: 333 RPAMYEAYHHIINCKVKDEKEKVSIAGGLCESSDVFGRDRELDKPEVGDILAIFDVGAYG 392 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 I+ N +N P + + + G +Y D Sbjct: 393 ISMANNYNARGRPRMILTSKKGVFLIRERETYADLIAK 430 >gi|256045584|ref|ZP_05448464.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. Rev.1] gi|260562895|ref|ZP_05833381.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|265992008|ref|ZP_06104565.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. Rev.1] gi|260152911|gb|EEW88003.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|263003074|gb|EEZ15367.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. Rev.1] Length = 421 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + + ALK + + L + G + S Sbjct: 25 VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K A+ + + +L + A Sbjct: 85 EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G + + NV G+ H + Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + KE I + +GGG+ P + Q + + Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + ++ EPG IV N L T V+ + E + KN VIVD+++ + L Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A G C GD G GD I+ Y + +N Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y + Sbjct: 385 SRLLIPEVLGDGERYHVVRPRRTYEELLA 413 >gi|257458921|ref|ZP_05624041.1| carboxynorspermidine decarboxylase [Campylobacter gracilis RM3268] gi|257443625|gb|EEV18748.1| carboxynorspermidine decarboxylase [Campylobacter gracilis RM3268] Length = 384 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 130/379 (34%), Positives = 207/379 (54%), Gaps = 16/379 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+ ++QKL+ NL+ + + +G K+L ALK FA +++Y+ G T S L+ Sbjct: 6 ISTPAYVCEEQKLVKNLEILRGVGERSGAKILCALKGFAFSFAMPYVDRYLWGATCSGLH 65 Query: 62 EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E E GE H Y+ A+K+ ++D +L + ++FN+ +Q K++ KA GL Sbjct: 66 EAKFAAEFIKNGEIHTYSPAFKEDDLDEILKISNHVVFNSAAQWQKYRAKALAAGASCGL 125 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFLC 174 R+NP S++ +P FSRLG + + ++ ++GL FH CE +S Sbjct: 126 RLNPQTSFAPKDAYNPCGSFSRLGMSLEALQRAILQDGEFLRGISGLHFHALCE-ESAQS 184 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 +L+ E +FG + ++W++ GGG H T Y V+ +K+F EKY V+IYLEPG Sbjct: 185 LERVLEVFEAKFGKYFRALKWLNFGGGHHITRAGYDVELLIDLIKKFREKYEVEIYLEPG 244 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMV 292 EA+ L +VLDI EN + I+D+S EAH+PD +L T+ +G ++ Sbjct: 245 EAVGWECGYLVASVLDIVENGAKIAILDASSEAHMPDTVLMPYRPTVRGESESGKFSYRF 304 Query: 293 CGRSCLAGDIFG------EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 G +CLAGD+ G E+ F+ P+ IGDR+ FED Y I + FNGI +P + + + Sbjct: 305 GGNTCLAGDVAGLESGQPEYKFDAPLNIGDRVIFEDQIHYTIVKNTTFNGIKLPDLVLAD 364 Query: 347 VDGTIKAIREFSYNDYYNN 365 G + I++F Y++Y Sbjct: 365 ERGEVLMIKKFGYDEYARR 383 >gi|182677052|ref|YP_001831198.1| diaminopimelate decarboxylase [Beijerinckia indica subsp. indica ATCC 9039] gi|182632935|gb|ACB93709.1| diaminopimelate decarboxylase [Beijerinckia indica subsp. indica ATCC 9039] Length = 423 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 114/389 (29%), Gaps = 27/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+Y + + + + A+K + + TL + G S Sbjct: 25 IGTPFYCYSTATITRHYEVFKAAFAGQDSLVCYAMKANSNQAVLQTLARLGAGMDVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD----KAQKLHK 116 E+ + ++ K A+ + FN S+ A+ Sbjct: 85 ELRRARAAGVPADRVTFSGVGKTEREIALALDEGIFCFNVESEPELAAISALAVARNKTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I LR+NP V + ++ G E + G+ H + Sbjct: 145 HIALRVNPDVDAKTHAKIATGKSENKFGIPISRAREVYRMAKNLPGIAITGVDLHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKE 220 F + I+ + LGGG+ + Y + +K+ Sbjct: 205 TDLTPFDHAFARAAEFVALLRADGHAIDHVDLGGGLGIPYHSGDDPETYHPDLYAGIIKK 264 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 +++ LEPG IV N L T VL + + K VIVD+++ V L Sbjct: 265 RLGGLGLKLVLEPGRLIVGNAGVLVTRVLYVKQGENKTFVIVDAAMNDLVRPTLYEAHHE 324 Query: 280 -----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + A + G C GD + GD ++ Y + + Sbjct: 325 IAPLRPPLQDAPGVVADIVGPVCETGDYLALARRMPEPRPGDYLAILSAGAYGAVQACTY 384 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYY 363 N + + +Y + Sbjct: 385 NTRLLVPEVLVKGAAYAVVRPRGTYEELI 413 >gi|127511256|ref|YP_001092453.1| diaminopimelate decarboxylase [Shewanella loihica PV-4] gi|126636551|gb|ABO22194.1| diaminopimelate decarboxylase [Shewanella loihica PV-4] Length = 414 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 56/382 (14%), Positives = 110/382 (28%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDNAVADHPHMICYAVKANSNLAVLNVLARLGSGFDIVSGGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + E ++ K + + + ++L + A +L K Sbjct: 86 LARVLEAGGEASKVVFSGVGKTVAEMEMALEAGIYCFNVESAAELEQLNLVALRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G ++ E V G H + Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMEEAEAIFLRANELPGLAVKGADCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + + +I + +GGG+ T + + L Sbjct: 206 ELQPFLDAMDRMLALIDRLAEQGVKIAHLDVGGGLGVTYDGEQPPEPSAYASALLGKLAG 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + EN + VD ++ + L Sbjct: 266 RDLKLIFEPGRAIAANAGIFVTQVLYLKENAEKNFALVDGAMNDLIRPSLYSAWQKIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + V G C GD G+ ++ D ++ Y + +N Sbjct: 326 VPRPGETRQYDVVGPVCETGDFLGKDRAL-NIRANDLLAVRSSGAYGFTMASNYNSRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + + Sbjct: 385 AEVMVDGERHYLVREREKVAQL 406 >gi|157692836|ref|YP_001487298.1| diaminopimelate decarboxylase [Bacillus pumilus SAFR-032] gi|157681594|gb|ABV62738.1| diaminopimelate decarboxylase [Bacillus pumilus SAFR-032] Length = 443 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 68/399 (17%), Positives = 129/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + ++ A K F++ MF + S Sbjct: 32 GTPLYVYDVALIRERAKSFQKAFIEEELTAQVAYASKAFSSIAMFQLAKEEGLSLDVVSG 91 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ +D A+ + I+ + ++ ++ Q+L K+ Sbjct: 92 GELHTAICAGFPVEKIHFHGNNKSRDELKMALENEIGCIVVDNFYEMKLLEELGQELSKQ 151 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G E K +ESE+ + G+ H Sbjct: 152 VKVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQADEAVKRVLESEVIELLGVHCHIG 211 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDFC------- 215 + F I + + +I +LGGG + Sbjct: 212 SQIFDTAGFVLAADKIFLKLNEWRESFGFISTVLNLGGGFGIRYTEEDEPLPATEYVEKI 271 Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 Q +KE +Y + ++EPG ++V + T T+ V + ++ Sbjct: 272 IQAVKENVARYEFDMPEIWIEPGRSLVGDAGTTLYTIGSSKHVPGIRDYVAVDGGMSDNI 331 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + T + G+ C +GD+ + GD ++ Sbjct: 332 RPALYQAKYEAASANKMSQSHDQTVSIAGKCCESGDMLIWDIDLPELSQGDLLAVFCTGA 391 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + + SY D Sbjct: 392 YGYSMSNNYNRIPRPAVVFVEDGEAQLVVERESYADMVK 430 >gi|317176826|dbj|BAJ54615.1| carboxynorspermidine decarboxylase [Helicobacter pylori F16] Length = 405 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 138/400 (34%), Positives = 211/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q +DG +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLDGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L KIGLRINP S ++ +P SRLG + + ++ V+GL Sbjct: 127 QLENLGLSPIKIGLRINPLYSEVTPVIYNPCSKVSRLGITPSEFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRNDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F F+ P+K GD+I F+D+ Sbjct: 306 LKVSVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDAPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKSFSYEDYKNR 404 >gi|114770083|ref|ZP_01447621.1| diaminopimelate decarboxylase [alpha proteobacterium HTCC2255] gi|114548920|gb|EAU51803.1| diaminopimelate decarboxylase [alpha proteobacterium HTCC2255] Length = 421 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 119/390 (30%), Gaps = 26/390 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + L+ + + A+K + + L G S Sbjct: 25 VGTPFYVYSQATLMRHFRVFDEALNGMKHLICYAMKANSNIAILKILGNLGAGMDVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E + G+ ++ ++ A+ + + ++L + A L Sbjct: 85 EYLRAKAAGISGDKIVFSGVGKTREEMALAIKNGIRQFNVESEAELKVLNEVALSLGAIA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN 169 I LR+NP V + ++ G E +V G+ H + Sbjct: 145 PITLRVNPDVDAKTHAKIATGKSENKFGIPISKAQEVYSIAASMEAIDVVGIDVHIGSQL 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F K + K I + LGGG+ ++ + + + E Sbjct: 205 TDLEPFRLAYKKVAELTKMLRQDGHNIRRLDLGGGLGIPYENSNQIPPTPEDYAKVIHET 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG + N + ++V+ S ++ +IVD+++ + + Sbjct: 265 VGDLDCEIEIEPGRLLAGNAGLMVSSVIYNKSGEGRDFMIVDAAMNDLIRPAMYEAYHEI 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + G C GD F PV G+ ++F Y + +N Sbjct: 325 IPVIETTGSPEIRDYDIVGPVCETGDTFANKRALTPVADGEMVAFRSAGAYGAVMASEYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + D S Sbjct: 385 TRPLIPEVLVYGDQFSIIRNRPSIEAIIKR 414 >gi|304394204|ref|ZP_07376127.1| diaminopimelate decarboxylase [Ahrensia sp. R2A130] gi|303293644|gb|EFL88021.1| diaminopimelate decarboxylase [Ahrensia sp. R2A130] Length = 423 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 117/389 (30%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + A+K + + +TL + G S Sbjct: 25 VGTPFYVYSSATLTRHYTVFADAFSELDALVCYAMKANSNQAVLETLARLGSGADVVSGG 84 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDK--AQKLHK 116 E+ ++ K + + + +L + A Sbjct: 85 ELTRARRAGIPASKIMFSGVGKTVAEMDLALGEEILCFNIESEPELEMLSARAAAMGKTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN 169 + RINP V + + G ++ E V G+ H + Sbjct: 145 HVSFRINPDVDAKTIEKISTGKKTDKFGIPHEEASRIYARAAELPGIKVTGIDMHIGSQI 204 Query: 170 K---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-----DYPVKDFCQRLKEF 221 F L ++ I+ + +GGG+ D+ +K+ Sbjct: 205 TDLAPFDTAFGKLADLVGHLRGEGHDIQHVDVGGGLGIPYHDDNNPPPNPDDYAAVVKKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 ++ EPG I N T V+ + E + ++ VIVD ++ + L Sbjct: 265 VTGLDAKVIFEPGRLIAGNAGLFVTKVIYVKEGDARSFVIVDGAMNDLIRPTLYEAYHEV 324 Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N +TA V G C +GD + + + GD I+ Y + +N Sbjct: 325 RSVDVNRGNGPRFTADVVGPVCESGDYLAKEREMQKPRPGDLIALGSAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D S ++ + Sbjct: 385 TRALVPEVMVKGDQYHVIRPRLSLDELID 413 >gi|307731218|ref|YP_003908442.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1003] gi|307585753|gb|ADN59151.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1003] Length = 420 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 120/387 (31%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + +A+K + + + + G S E Sbjct: 28 GTPLYVYSRAALTEAWNAYASACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + E ++ + + +A+ + ++ +L++ A ++ Sbjct: 88 LARVLAAGGKAENTVFSGVGKHANEMREALAAGVKCFNVESIPELDRLNAVAAQMGKKAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G + + V G+ H + Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFDEARATYQAAAAMANLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + ++ I I +GGG+ T D D ++ ++ Sbjct: 208 EVAPYLDAVDKLLELVEQIEQDGMTIRHIDVGGGLGITYDDETPPDISDFVRTVLDRIEA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 ++Y EPG ++V N L T V + KN IVD+++ + A Sbjct: 268 RGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEKNFAIVDAAMNDLARPAMYEAYHAI 327 Query: 281 ---IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + V G C +GD G V+ GD ++ Y + +N Sbjct: 328 DAVVQRELPAHVYDVVGPVCESGDWLGRERLLA-VEPGDLLAIRSAGAYGFVMSSNYNTR 386 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + Sbjct: 387 PRAAEVMVDGTQAHVVRAREEVQQLFA 413 >gi|149370483|ref|ZP_01890172.1| diaminopimelate decarboxylase [unidentified eubacterium SCB49] gi|149356034|gb|EDM44591.1| diaminopimelate decarboxylase [unidentified eubacterium SCB49] Length = 414 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 69/386 (17%), Positives = 121/386 (31%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D + N K VK+ A+K + + + + G + S+ Sbjct: 14 GSPVYVYDATTIENQYKRLTSAFKKVKQVKVHYAVKALSNISILKLIKSFGAGLDTVSIQ 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG F + + + + I +++S L +F + + + Sbjct: 74 EVQLGLTAGFEPQDIIFTPNGVSLDEIEKVAKLGVQINIDSLSVLEEFGTR--NKNVPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173 +RINP V S+ G NVNG+ H + Sbjct: 132 IRINPHVMAGGNTNISVGHIDSKFGISIHQIPHILRIVENTKMNVNGIHMHTGSDILDID 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230 F + I E +E+I G G K ++ + E + Sbjct: 192 VFLYASE-ILFETAKNFKNLEFIDFGSGFKVPYKKDDIETNIEEFGEKLSQRFNDFCKNY 250 Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280 EPG+ +V+ V +I + VDS + L E Sbjct: 251 GKELTLAFEPGKFLVSEAGQFLVQVNNIKQTTSTVFAQVDSGFNHLIRPMLYGSQHEIVN 310 Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I G V G C D F + GD +SF++ Y + + FN Sbjct: 311 ISNPEGRERFYSVVGYICET-DTFANNRRISEINQGDILSFKNAGAYCYSMSSNFNSRYR 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + + +++D +N Sbjct: 370 PAEVLWYNEKAHLIRKRETFDDIIHN 395 >gi|323339443|ref|ZP_08079725.1| diaminopimelate decarboxylase [Lactobacillus ruminis ATCC 25644] gi|323093154|gb|EFZ35744.1| diaminopimelate decarboxylase [Lactobacillus ruminis ATCC 25644] Length = 435 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 66/397 (16%), Positives = 131/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP D +K+ + ++AGVK + A K F+A M+ +N+Y G S Sbjct: 30 GTPLIAYDVKKIKKQIRGFKQAFEDAGVKYMVSYASKAFSALAMYQLINKYGLGCDIVSG 89 Query: 61 YEVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + E ++ +D AV T++ + ++ ++ H Sbjct: 90 GELYAALKGGMPPERIEFHGNNKLQDELEMAVDEKIGTVVVDNFREIKLLDHVLRRKHAS 149 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 IG LR+ P + + S+ G E + +++ N+ G+ H Sbjct: 150 IGVVLRVTPGIEAETHQYIMTGQSNSKFGFDIRSGQAEEALQQLMKNPRMNLMGIHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + F + + + + + + ++LGGG D+ + Sbjct: 210 SQIFAVNGFLMAAEKLVEVLADWKKRFGYEADVLNLGGGFGIRYNDFDQPLPAEEFVSAI 269 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + +I +EPG A+V T T+ + VD + ++ Sbjct: 270 VERVKELVAKYELKMPEIIIEPGRAMVGEAATTLYTIGSRKDVDGVCHFLAVDGGMGDNI 329 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + V G+ C +GD+ K GD ++ Sbjct: 330 RPALYDAHYEAYLADRPNALREQMVTVVGKYCESGDVLVHDCALPNTKPGDILAMPSTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + +N P + + +R +Y D Sbjct: 390 YGYTMASNYNRNPRPAVVFCEDGKSRLVVRRETYADM 426 >gi|120609686|ref|YP_969364.1| diaminopimelate decarboxylase [Acidovorax citrulli AAC00-1] gi|120588150|gb|ABM31590.1| diaminopimelate decarboxylase [Acidovorax citrulli AAC00-1] Length = 427 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 61/389 (15%), Positives = 114/389 (29%), Gaps = 28/389 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K +L+ L+ V++ A+K ++ G+ + G S E Sbjct: 34 GTPLYVYSKASMLSALEAYQRGFAGRKVQICYAMKANSSLGVLQLFARAGCGFDIVSAGE 93 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G + V E+ + + +L + A Sbjct: 94 LRRVLAAGGEAAKVIFSGVGKTRQEMREALEAGIGCFNVESEPELEVLNEVAMACGRRAP 153 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 + +R+NP+V ++ G + V G+ H + Sbjct: 154 VSIRVNPNVDPKTHPYISTGLKGNKFGVAHERTVATYQRAAALPGLQVVGIDCHIGSQIT 213 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + + I I GGG+ K+ + Sbjct: 214 EATPYLDAVDRMLDLVAQIESAGIPIHHIDFGGGLGIDYNGDTPPAADALWKQLLARLDA 273 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 Q +EPG ++V N T VL + + + + +P +YQ I Sbjct: 274 RGYGDRQFMIEPGRSLVGNAGVCLTEVLYVKPGEQKNFCIVDAAMNDLPRPAMYQAFHGI 333 Query: 282 YPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P P V G C +GD G V+ GDR++ Y + + +N Sbjct: 334 VPVAAPARDAATAVYDVVGPVCESGDWIGRDRTLA-VRAGDRLAVLSAGAYCSSMGSTYN 392 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 P + + D + Sbjct: 393 TRARPAEVLVDGTHAHLIRTREPLEDTFR 421 >gi|119945950|ref|YP_943630.1| carboxynorspermidine decarboxylase [Psychromonas ingrahamii 37] gi|119864554|gb|ABM04031.1| carboxynorspermidine decarboxylase [Psychromonas ingrahamii 37] Length = 376 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 172/365 (47%), Positives = 235/365 (64%), Gaps = 3/365 (0%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TPY+++D++KL+ NL+ A ++K +G KL+LALKCF+ WG FDT+ Y+DGTTSS +EV Sbjct: 10 TPYFMVDEKKLIENLEKAKQLKKISGAKLVLALKCFSTWGTFDTIKPYLDGTTSSGPFEV 69 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 LGHE FGGETHAY+V Y +I+ V D IIFN+++QL +A +GLRIN Sbjct: 70 QLGHETFGGETHAYSVGYSSHDINTVAPLSDKIIFNSLTQLAT-HFEAANPFASLGLRIN 128 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 P S + LA+P RP+SRLG K S + V+G MFH NCENK F +L I Sbjct: 129 PERSVAGQDLANPTRPYSRLGVKQDLLDLSIVDKVDGFMFHMNCENKDADAFIEILDYIS 188 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 F ++T ++W+SLGGGI FT DYP++ LK FSEK+ +Q+YLEPGEAI+T T Sbjct: 189 NTFAEYLTHLKWLSLGGGIFFTAPDYPIEKLALALKAFSEKHQLQLYLEPGEAIITRTAD 248 Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAMVCGRSCLAGD 301 L +V+DI +N K IVDS+ EAH D L+Y E A+I G + ++ SCLAGD Sbjct: 249 LVVSVIDIVDNNKKTAIVDSATEAHRLDTLIYNEPASIGEASADGAFPYIIGSCSCLAGD 308 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 F E F++ ++IG ++ D AGY + + NWFNG+ MP+I K VDG I+ + F Y D Sbjct: 309 QFCETQFDEALQIGQKLHILDSAGYTMVKLNWFNGLKMPSIYYKRVDGEIELLNSFDYQD 368 Query: 362 YYNNL 366 Y ++L Sbjct: 369 YKDSL 373 >gi|78187207|ref|YP_375250.1| diaminopimelate decarboxylase [Chlorobium luteolum DSM 273] gi|78167109|gb|ABB24207.1| diaminopimelate decarboxylase [Chlorobium luteolum DSM 273] Length = 416 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 61/386 (15%), Positives = 115/386 (29%), Gaps = 23/386 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K + + ++K + TL G +S E Sbjct: 29 GTPLYVTSKHSIEDRYREFEAAFSGLEHFTCYSVKANFNLSVIKTLGDLGCGCDVNSAGE 88 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKA--QKLHKK 117 + G + K + + ++ ++S+L A + L Sbjct: 89 LFRALKAGVPGSRIIFAGVGKRPDEISYALLSGVLMLKAESLSELRAIDAIAAERGLTAP 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LRINP+V+ + G + E + + GL H + Sbjct: 149 VALRINPNVTAETHPYITTGDSKEKFGIDEAELPEVFSLLGELQHVRLVGLDMHIGSQIF 208 Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + A + + F +E++ +GGG T + P+ F ++ + Sbjct: 209 DPEFYVAAITKLLDIFNYSRSKGFGVEFLDIGGGFPATYDPMKPETPLDRFADKIIPMLK 268 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQESATI 281 V++ EPG ++ N + L T +L N + + L + Sbjct: 269 PTGVKVIFEPGRFLLANASVLLTRILYRKRNHTGKEFFVVDGGMTELIRPALYQSHHEVL 328 Query: 282 YPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T V G C + D F G+ ++ V Y + +NG Sbjct: 329 SVTRHDETVVADVVGPICESSDFFARQRAIGDAPEGELLAVMTVGAYGAVMSSNYNGRLR 388 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + R S+ N Sbjct: 389 PAEVMVEGSDVQVIRRRESFEQLIQN 414 >gi|187925578|ref|YP_001897220.1| diaminopimelate decarboxylase [Burkholderia phytofirmans PsJN] gi|187716772|gb|ACD17996.1| diaminopimelate decarboxylase [Burkholderia phytofirmans PsJN] Length = 420 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 122/387 (31%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + +A+K + + + + G S E Sbjct: 28 GTPLYVYSRAALTEAWNAYAGACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGHEKFG-GETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKK 117 + G E ++ + D DA+ + ++ +L++ A Sbjct: 88 LARVLAAGGRAENTVFSGVGKHADEMRDALAAGVKCFNVESIPELDRLNAVAAAMGKKAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G +D + V G+ H + Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARATYQAAAAMANLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + ++ +I I +GGG+ T D + + ++ ++ Sbjct: 208 EVAPYLDAVDKVLELVEQIEQDGVKIRHIDVGGGLGITYDDETPPEIGEFVRTVLDRIEA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 ++Y EPG ++V N L T V + KN IVD+++ + Sbjct: 268 RGHGHREVYFEPGRSLVGNAGMLLTRVEFLKPGAEKNFAIVDAAMTDLARPAMYEAYHAI 327 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + + V G C +GD G V+ GD ++ Y + +N Sbjct: 328 DPVVKRDVPAHVYDVVGPVCESGDWLGRERLLS-VEPGDLLAIRSAGAYGFVMSSNYNTR 386 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + Sbjct: 387 PRAAEVMVDGTQVHVVRAREEVKQLFA 413 >gi|88705498|ref|ZP_01103208.1| Diaminopimelate decarboxylase [Congregibacter litoralis KT71] gi|88700011|gb|EAQ97120.1| Diaminopimelate decarboxylase [Congregibacter litoralis KT71] Length = 414 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 111/384 (28%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL + + L + A+K + + DTL + G S+ E Sbjct: 25 GTPCYLYSRAAMEAALAEYHDALSGCEHLVCYAVKANSNLAVLDTLARQGAGFDIVSVGE 84 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ ++ A+ + ++L ++ A L Sbjct: 85 LERVLAAGGDPGKVVFSGVVKRREEMHRALELGIRCFNVESEAELEVLQEVAAALGKRAP 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 + +R+NP V ++ G ++ V GL H + Sbjct: 145 VSVRVNPDVDAGTHPYISTGLRENKFGVATDVAMKLLRHGKTLPNIDVIGLDCHIGSQLT 204 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---KEFSEK 224 L+ + +I + LGGGI KD + ++ Sbjct: 205 DMAPLLESLRQLLVMVDTLEAEGIRIHHLDLGGGIGVRYKDEEPPAIADYIAAVRKALGD 264 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283 + + EPG +IV N L T V E + VD+++ + L Sbjct: 265 RKLCLVFEPGRSIVANAGVLLTRVHYTKETDAHSFALVDAAMNDFIRPALYQAWVDIQTT 324 Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T + G C GD G+ + G ++ Y + +N Sbjct: 325 APSEEPIRTWNIVGPVCETGDFLGKDRDLA-LAPGTLLAIHGAGAYGFVMSSNYNTRPRA 383 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + + S D Sbjct: 384 AEVMIDGSSSQLVRERESIGDLLR 407 >gi|170718155|ref|YP_001785183.1| diaminopimelate decarboxylase [Haemophilus somnus 2336] gi|168826284|gb|ACA31655.1| diaminopimelate decarboxylase [Haemophilus somnus 2336] Length = 417 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 63/384 (16%), Positives = 120/384 (31%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDNALGDHPHLICFAVKSNPNIAILNIMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K + A + ++L K A+K+ K Sbjct: 86 LERVLFAGGDPKKVVFSGVAKSEQEIARALEVGIRCFNVESAAELTKINQVARKMGKIAS 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LR+NP V ++ G + E + + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVEQAREVYRQASQLENIKIVGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSE 223 F + ++ +E + LGGG+ T +P + L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKKDGITLEHVDLGGGLGVTYSDEKAPHPSEYATALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +++I LEPG AI N L T V I ++ IVD+ + + L I Sbjct: 266 YQNLEIILEPGRAITANAGILLTRVEYIKSNESRHFAIVDTGMNDMIRPALYQAYMNIIE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I Y + + +N Sbjct: 326 VDRTLSRETKVYDVVGPICETSDFLGKQRSLA-IAQGDFIVQRSAGAYGASMASTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + + R + + Sbjct: 385 RAIEIMVDGEQVHLIKRREEFAEL 408 >gi|146295969|ref|YP_001179740.1| diaminopimelate decarboxylase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409545|gb|ABP66549.1| diaminopimelate decarboxylase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 433 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 63/402 (15%), Positives = 123/402 (30%), Gaps = 37/402 (9%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 M TP Y+++++ + N++ + ++ A K F M Q G Sbjct: 28 MYGTPLYVMNERMIRENINRFKNALEKYFGQNGLVIYASKAFCTKAMCQIAKQEEIGLDV 87 Query: 58 SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E+ F + ++ K + + + N I+ + +L + Sbjct: 88 VSGGELFTALSVDFPTDKIFFHGNNKTYDELEMAVENGVKIVIDNFDELEMLSVICKTKS 147 Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164 K + +R+ P + + S+ G ++ +E + + GL H Sbjct: 148 KKANVLIRVKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMVKKILEMDELKLIGLHCH 207 Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---- 216 + F ML+ I K +I+ + LGGG + + Sbjct: 208 IGSQIFETAPFKLAARVMLEFILKIKRELNYEIDILDLGGGFGIKYTAFDQPPQIEKFIE 267 Query: 217 -------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263 + E I LEPG +IV T+ I E + Sbjct: 268 AISEEIEEFCQQKELKKPFIVLEPGRSIVGEAGITLYTIGSIKEIPNVRNYASVDGGMTD 327 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + + + GR C +GDI + +K G ++ Sbjct: 328 NPRYALYQAKYDAYVVENPIGEKVKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N P + + ++ +Y D N Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKDSQVRVIVKRETYEDIVRN 429 >gi|312130133|ref|YP_003997473.1| carboxynorspermidine decarboxylase [Leadbetterella byssophila DSM 17132] gi|311906679|gb|ADQ17120.1| carboxynorspermidine decarboxylase [Leadbetterella byssophila DSM 17132] Length = 379 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 118/373 (31%), Positives = 197/373 (52%), Gaps = 9/373 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P ++++++ L NNL+ ++ +G ++++ALK F+ + F + QY+ G T+SSL Sbjct: 8 IPSPAFVLEEKLLKNNLELLKSVQDRSGAEIIVALKGFSFYSKFPLVKQYLSGATASSLN 67 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 E L E+ G H Y AYK+ E D ++ I FN+++Q K+KDK A +G Sbjct: 68 EARLIVEEMGVLAHTYCPAYKEEEFDQMMEYSSHITFNSLNQYEKYKDKVKAFPRKISMG 127 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRINP + + + +P SRLG ++ + + GL H CEN S+ L Sbjct: 128 LRINPEYAEVEVDMYNPAIKGSRLGITRNLLGDTLPEGIEGLHSHTLCENDSY-VLERTL 186 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 +IE +FGH + Q +W++LGGG T K Y + ++ KY++++ LEPG AI Sbjct: 187 VHIEGKFGHLLHQAKWLNLGGGHLMTRKGYDHEHLIGLIQNLKAKYNIEVILEPGSAIGW 246 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIYP-----NTGPYTAMVC 293 T L + VLDI +++ + + A H+PD L ++ G + + Sbjct: 247 ETGFLRSKVLDIVDSLGVKIAILDVSFAAHMPDTLEMPYKPKVWGAESEAVEGKFVYRLG 306 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G +CLAGD E+ F++ +K GD I F D+ Y + + FNG+ +P+I V DG+ + Sbjct: 307 GMTCLAGDYMSEYSFDQELKEGDTIVFNDMIHYTMVKTTTFNGVGLPSIGVLREDGSFEL 366 Query: 354 IREFSYNDYYNNL 366 ++ F Y + + L Sbjct: 367 LKSFGYETFKDRL 379 >gi|299821617|ref|ZP_07053505.1| diaminopimelate decarboxylase [Listeria grayi DSM 20601] gi|299817282|gb|EFI84518.1| diaminopimelate decarboxylase [Listeria grayi DSM 20601] Length = 488 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 57/404 (14%), Positives = 129/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + G ++ A K F+A ++ + + S Sbjct: 83 GTPLYVYDVALIRDRARGFKRTFEEMGITAQVAYASKAFSAIAIYQLMAEEGLSVDVVSG 142 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E ++ K E + I+ + +++ K ++ Sbjct: 143 GELYTAIKAGFPAELIHFHGNNKTREEIEMALDYEIGCIVVDNFYEIDLLKTILSERQQK 202 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + +S +V GL H Sbjct: 203 VSVLVRVTPGIEAHTHDYILTGQEDSKFGFGLDNGQAEKALQLLLQDSAYFDVKGLHCHI 262 Query: 166 NCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F ++ + + F + ++LGGG + + +++ Sbjct: 263 GSQIFETTGFKVAAHRVMDKLVEWRDAFGFKASVLNLGGGFGVRYTADDEPLEPAEYVRQ 322 Query: 221 FSEKYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 + +I++EPG A+V T ++ E + + + Sbjct: 323 IILEVKEVAQQNELAVPEIWIEPGRALVGEAGTTLYSIGSRKEVPGIRDYIAVDGGMNDN 382 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + + N T + G+ C +GD+ ++ G+ ++ Sbjct: 383 IRPALYDAKYEAVIANHPEKAAEETVSIAGKCCESGDMLIWDIPLPNMQSGEILAVFCTG 442 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y+D N LS Sbjct: 443 AYGYAMASNYNRICRPAVVFVENGIDKLVVARETYDDLIQNDLS 486 >gi|168185565|ref|ZP_02620200.1| diaminopimelate decarboxylase [Clostridium botulinum C str. Eklund] gi|169296355|gb|EDS78488.1| diaminopimelate decarboxylase [Clostridium botulinum C str. Eklund] Length = 432 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 67/399 (16%), Positives = 120/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y++D++ + N K K+ A K F M +N+ S Sbjct: 29 KTPLYVMDEELIRENCRRYRKNFKGNNEANKVAYAGKAFLTIAMCQLINEEGMCLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E ++ K E + + + ++ A Sbjct: 89 GELYTAYKSNFPMEKIYFHGNNKTFEEIDMAIKLGVGRFVADNFYEIQNINKIAKKYNKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 +KI LRI P + + S+ G + G H Sbjct: 149 QKILLRITPGIEAHTHDYIKTGQIDSKFGFTLLQDQTLKAVEMANDFSNIEFVGFHCHIG 208 Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + ML I++ I+ + LGGG + Sbjct: 209 SQIFEIEPYRDEVRIMLSLIKEVNEKLGCTIKELDLGGGFGIYYGKGDSPKKIEDFCSAI 268 Query: 223 EKYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + ++++ +EPG +IV N T TV I E + V + ++ Sbjct: 269 LEEAIKVSKELNIQLPSLVIEPGRSIVGNAGTTLYTVGSIKEIPEIRKYVSVDGGMTDNI 328 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N + G+ C +GDI E + GD ++ Sbjct: 329 RPALYRASYECLVANKVKAASKEKVTISGKCCESGDILLEDVKVSHAESGDILAVLTTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I + N + + SY D + Sbjct: 389 YGYSMASNYNKIPRSAVVFVNKGRSKLICKRQSYEDLIS 427 >gi|297616725|ref|YP_003701884.1| diaminopimelate decarboxylase [Syntrophothermus lipocalidus DSM 12680] gi|297144562|gb|ADI01319.1| diaminopimelate decarboxylase [Syntrophothermus lipocalidus DSM 12680] Length = 443 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 61/399 (15%), Positives = 124/399 (31%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV-KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y++D++ N G ++ A K + + + G S Sbjct: 24 GTPLYVLDEEGFRANCRAFRDAFAKYGHSLVIYASKTLSCLAACIIVEEEGLGLDVVSGG 83 Query: 62 EVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ F E ++ K D + AV S ++ + ++ ++ ++L + Sbjct: 84 ELYTALRASFPPERIFFHGNNKTLDELVMAVESRVGRVVVDNFYEIELLENVCERLGRTQ 143 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIES-------EIKNVNGLMFHNNC 167 I LRI P V + S+ G D +++ + + GL H Sbjct: 144 NILLRITPGVEAHTHEYIKTGQIDSKFGFTLANGDALKAVDTVCRTKNLRLMGLHCHIGS 203 Query: 168 ENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + ++ + + F ++E +++GGG + + Sbjct: 204 QIFEMDAYAHATEIMVDLLAEIKNRFGLELEELNMGGGFGIYYHSGDEPRQPEEWAKAVM 263 Query: 224 K-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 ++ +EPG AI T+ E V + + Sbjct: 264 STLRSKTEANALRMPKVIVEPGRAIAGPAGITLYTLGSYKEIPGVRKYVAVDGGMTDNPR 323 Query: 271 DYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + + V GR C +GD+ + GD ++ Y Sbjct: 324 PALYGSKYEAVIANRADREPDELVSVAGRCCESGDMLIWDIKLSHPQPGDILAVFATGAY 383 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N + + +N + P + + ++ SY D N Sbjct: 384 NYSMSSNYNRVGRPAMVLVRDGQADLIVKRESYEDLIRN 422 >gi|212638853|ref|YP_002315373.1| diaminopimelate decarboxylase [Anoxybacillus flavithermus WK1] gi|212560333|gb|ACJ33388.1| Diaminopimelate decarboxylase [Anoxybacillus flavithermus WK1] Length = 460 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 55/401 (13%), Positives = 119/401 (29%), Gaps = 37/401 (9%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSS 58 + TP Y+ D + + V+ + A K F+ + + Q Sbjct: 49 LYGTPLYIYDVALIRERARAFKRMFDKHRVRAQVAYASKAFSTIAIVQLMEQEGLSLDVV 108 Query: 59 SLYEVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E+ F E ++ K + A+ + ++ + +L + Sbjct: 109 SGGELYTALAAGFPVERIHFHGNNKSKEELQMAIEAKIGCVVVDNFYELELLQQLCLMHE 168 Query: 116 KKI--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFH 164 + LR+ P + + S+ G E + + S +V G+ H Sbjct: 169 YTMPILLRVTPGIEAHTHDYILTGQEDSKFGFDLHNGQADEALQRALASSHIHVLGIHCH 228 Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------- 212 + F + + + + ++LGGG Sbjct: 229 IGSQIFDATGFVLATKKLFEKLAIWRDTHHFTAQVVNLGGGFGIRYTKEDDPLAPEQYVE 288 Query: 213 DFCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEA 267 + +K + +I++EPG ++V + T T+ E V + Sbjct: 289 QIIEEVKRNVASFHLPFPEIWIEPGRSLVGDAGTTIYTIGSRKEVPNVRQYVAVDGGMSD 348 Query: 268 HVPDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 ++ L + + + + G+ C +GD+ + GD ++ Sbjct: 349 NIRPALYEAKYEAVLANRMHDHCEEVVAIAGKCCESGDMLIWDLPLPKAQPGDYLAVFCT 408 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y N +N I P + ++ +Y D Sbjct: 409 GAYGYAMANNYNRIPRPAVVFVEDGEAQLVVKRETYEDLIR 449 >gi|296536745|ref|ZP_06898801.1| diaminopimelate decarboxylase [Roseomonas cervicalis ATCC 49957] gi|296262912|gb|EFH09481.1| diaminopimelate decarboxylase [Roseomonas cervicalis ATCC 49957] Length = 447 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 54/394 (13%), Positives = 117/394 (29%), Gaps = 29/394 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP ++ L + AG + A K + L G S Sbjct: 48 VGTPTWVYSANTLRRRYRALRDALRGAGLDASIHYATKANDNQAVLRVLGAEGAGADIVS 107 Query: 60 LYEVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-- 114 + E+ ++ + A+ + +V +++ A +L Sbjct: 108 MGELRATMAAGIPAGATVFSGVGKKPEEIRFALAQGIFQLNAESVEEIDMIAAIAAELGV 167 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-----ESEIKNVNGLMFHNNCEN 169 + LR+NP V + ++ G +D + + + + + + + Sbjct: 168 RAPVALRVNPDVDAKTHAKITTGKAENKFGIAYEDALPLYARMAALPAIRPIGIATHIGS 227 Query: 170 KSFLCFSAMLKNIEK------EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKE 220 + + + IE + GGG+ +D P + ++ Sbjct: 228 QITEGVAPFRAAYARLAEMVRAIRAQGLPIERVDCGGGLGIPYRDEVAPPPEALAGAIQA 287 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 + + LEPG I L + VL + ++ D+++ V + Sbjct: 288 TLGGLGLPVMLEPGRWIAGPAGVLLASIVLQKQGRGRRFLVADAAMNDLVRPAMYEAWHG 347 Query: 280 TIYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + + A + G C +GD F + GD I+F D Y + + Sbjct: 348 ILPLDPKRHAAPLAPADIVGPVCESGDTFARGRAMPDMAPGDFIAFLDAGAYGAVMSSTY 407 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYY--NNL 366 N + + + + D L Sbjct: 408 NARPLAAEVLVDGHRHAVVRPRQTPEDLLAHQRL 441 >gi|295704431|ref|YP_003597506.1| diaminopimelate decarboxylase [Bacillus megaterium DSM 319] gi|294802090|gb|ADF39156.1| diaminopimelate decarboxylase [Bacillus megaterium DSM 319] Length = 442 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 128/400 (32%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + + +G ++ A K F M L + S Sbjct: 30 GTPLYIYDQELIETKCKAFHSAFRRSGFSYQIAYAGKAFLCMEMASLLTKLDMSLDVVSG 89 Query: 61 YEVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ E + E ++ K + A+ +N + + ++L A +K Sbjct: 90 GELFTALEAGYPAERIHFHGNNKTIEEMEMALDANIGCFVVDNFTELEVLHALAAERKQK 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I LR+ P + + S+ G + +E ++ G+ H Sbjct: 150 ASILLRVTPGIEAHTHEYIMTGQEDSKFGFGLSNDQAMKAVSSALEKPYYDLLGIHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + FS + + +++ +++GGG + + + Sbjct: 210 SQIFEVDGFSRAIDILTDFLFSIRDKMEFEVKVLNVGGGFGIRYTESDSPLPVEYYVDAL 269 Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + ++++EPG +IV T T+ E +D + ++ Sbjct: 270 TEKLSRTLTEQNYTLPEVWIEPGRSIVGEAGTTLYTIGSTKEIPGVRKYVGIDGGMTDNI 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + T + G+ C +GD+ V GD ++ Sbjct: 330 RPALYDAKHEAVLANRVTDKKDETVSIAGKCCESGDMLIWDIDLPRVNQGDLLAVSSTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P + A+ +Y D Sbjct: 390 YNYSMASNYNRIPRPAVVFVKNGEARLAVERETYEDLVRK 429 >gi|113461849|ref|YP_719918.1| diaminopimelate decarboxylase [Haemophilus somnus 129PT] gi|112823892|gb|ABI25981.1| diaminopimelate decarboxylase [Haemophilus somnus 129PT] Length = 417 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 120/384 (31%), Gaps = 25/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWYAFDNALGDHPHLICFAVKSNPNIAILNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K + A + ++L + A+K+ K Sbjct: 86 LERVLFAGGDPKKVVFSGVAKSEQEIARALEVGIRCFNVESAAELIRINQVARKMGKIAS 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LR+NP V ++ G + E + + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVEQAREVYRQASQLENIKIVGIDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSE 223 F + ++ +E + LGGG+ T +P + L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKKDGITLEHVDLGGGLGVTYSDEKAPHPSEYATALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +++I LEPG AI N L T V I ++ IVD+ + + L I Sbjct: 266 YQNLEIILEPGRAITANAGILLTRVEYIKSNESRHFAIVDTGMNDMIRPALYQAYMNIIE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I Y + + +N Sbjct: 326 VDRTLSRETKVYDVVGPICETSDFLGKQRSLA-IAQGDFIVQRSAGAYGASMASTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 + + + R + + Sbjct: 385 RAIEIMVDGEQVHLIKRREEFAEL 408 >gi|332300309|ref|YP_004442230.1| carboxynorspermidine decarboxylase [Porphyromonas asaccharolytica DSM 20707] gi|332177372|gb|AEE13062.1| carboxynorspermidine decarboxylase [Porphyromonas asaccharolytica DSM 20707] Length = 388 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 110/378 (29%), Positives = 193/378 (51%), Gaps = 16/378 (4%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TPYYL+++ L NL+ + + AGV+++LA K +A W F +Y+ +T+SS +E Sbjct: 11 TPYYLLEESLLRRNLELIRSVAERAGVEIILAFKAYALWRTFPIFKEYIHASTASSPWEA 70 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121 LG+E+ G HAY AY + I + I N+ +Q +F + ++ GLR Sbjct: 71 RLGYEEMGAPVHAYTPAYSEDNITDFVHYSSHITLNSPTQWQRFGPASPYAAEQISYGLR 130 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLMFHNNCENKSFLCFSA 177 +N + S K + +P P +R G + + E + + G+ H CE Sbjct: 131 LNLAYSPVKTEIYNPALPGTRFGVSAETLRQMEQEGALTGLEGVHLHVLCE-GDDEQLEL 189 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEA 236 +L+ +E+ FG + +++W++LGGG T ++Y + L+ F E++ ++ +EPG A Sbjct: 190 VLERLEERFGFILDKVQWLNLGGGHLMTHREYDTEHLVALLRAFRERHPNLRVIMEPGSA 249 Query: 237 IVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESA-------TIYPNTGPY 288 T L V+DI N I++ S H+PD L P G + Sbjct: 250 FAWQTGDLYAQVVDIVTNDGIKTAIMNVSFACHMPDCLEMPYHPVVEGATQCDTPEAGTH 309 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 + + G SCL+GD G + F+ P++IG+ + +D+ Y + N FNG+ P IA++++D Sbjct: 310 SYRLGGNSCLSGDYMGYWTFDHPLEIGETLVLKDMLHYTTVKTNMFNGVQHPAIALRHLD 369 Query: 349 GTIKAIREFSYNDYYNNL 366 G+++ +R F Y+DY + + Sbjct: 370 GSVEMLRSFDYSDYKSRM 387 >gi|296109111|ref|YP_003616060.1| diaminopimelate decarboxylase [Methanocaldococcus infernus ME] gi|295433925|gb|ADG13096.1| diaminopimelate decarboxylase [Methanocaldococcus infernus ME] Length = 431 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 70/396 (17%), Positives = 131/396 (33%), Gaps = 33/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG------VKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++ ++++ N + + K L A K + + L + G Sbjct: 28 GTPLYIMSEEQIKINFNRYVEAFKRYEEETGKEFILAYAYKANSNLAITKLLAKLGSGAD 87 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113 S E+ + + E +N K E + + +++S+L + A++ Sbjct: 88 VVSGGELYIAKLSQVPSEKIVFNGNCKIREEIIMGIESEIRAFNVDSISELIMINEIAKE 147 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFH 164 L + RINP V ++ G K +++ + GL H Sbjct: 148 LGKEANVAFRINPDVDPKTHPKISTGLKKNKFGLDTKTALKAIDMALKMENINFVGLHCH 207 Query: 165 NNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD---------KDYPVK 212 + F K + + ++ ++LGGG+ KDY Sbjct: 208 IGSQLTDVSPFVEATKKMMEFILKLKEKNIEVRDLNLGGGLGIPYHKDKEIPTVKDYANS 267 Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD 271 LK + + +EPG +IV L V I E V++D+ + + Sbjct: 268 IIETILKFKDKVEMPNLIIEPGRSIVATAGYLVGKVWHIKETEVTKWVMIDAGMNDLMRP 327 Query: 272 YLLYQESATIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + V G C + D+FG V++GD I D Y I+ Sbjct: 328 AMYDAYHHMENAKVKGEKEKVSVAGGLCESSDVFGRDREIDKVEVGDYIVIFDAGAYGIS 387 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N +N P + + + G +++D Sbjct: 388 MSNNYNSRGRPRMILTSKKGVYIIRERETFSDLIAK 423 >gi|189499930|ref|YP_001959400.1| diaminopimelate decarboxylase [Chlorobium phaeobacteroides BS1] gi|189495371|gb|ACE03919.1| diaminopimelate decarboxylase [Chlorobium phaeobacteroides BS1] Length = 416 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 70/386 (18%), Positives = 121/386 (31%), Gaps = 23/386 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L+N + ++K + TL G +S E Sbjct: 29 GTPLFVTSRNSLVNQYRSFEKAFALLDHLTCYSVKANFNLHIIRTLAAEGCGFDVNSGGE 88 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKAQKL--HKK 117 + K + ++ ++S+L + A +L Sbjct: 89 LYRALQAGADPAKIIMAGVGKSAAEIEYAISSGILMLKTESLSELRLIDEIAGRLGVQAS 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 +G+R+NP+V+ + G D + + N+ L H + Sbjct: 149 VGIRVNPNVTAETHPYITTGDSKEKFGIDETDLAQVFSLIGAMDHVNLTALDMHIGSQIF 208 Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + A + + I + +GGG T P+ F ++L E Sbjct: 209 DTEFYHAASEKLLDVLAVARSAGFAIRYFDIGGGFPVTYDPQKPATPIGHFAEKLIPLLE 268 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLYQESATI 281 K I EPG I N+T L T VL N K VIVD+ + + L + Sbjct: 269 KAGTTILFEPGRFIAANSTVLVTRVLYRKRNHAGKEFVIVDAGMTELIRPALYQSHHEIV 328 Query: 282 YPNTGP--YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 A V G C +GD F V G+ ++ Y N +NG Sbjct: 329 AVKPHDSMMVADVVGPVCESGDFFARARTIDAVGEGELLAVLSSGAYGSVMGNNYNGRLR 388 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + D + ++ N Sbjct: 389 PAEVMVDGDDATLIRKRDTFEQLIQN 414 >gi|115445929|ref|NP_001046744.1| Os02g0440000 [Oryza sativa Japonica Group] gi|75294265|sp|Q6ZG77|DCDA_ORYSJ RecName: Full=Probable diaminopimelate decarboxylase, chloroplastic; Short=DAP decarboxylase; Flags: Precursor gi|46805542|dbj|BAD16980.1| putative diaminopimelate decarboxylase [Oryza sativa Japonica Group] gi|113536275|dbj|BAF08658.1| Os02g0440000 [Oryza sativa Japonica Group] gi|215695077|dbj|BAG90268.1| unnamed protein product [Oryza sativa Japonica Group] Length = 490 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 67/393 (17%), Positives = 124/393 (31%), Gaps = 29/393 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+YL K +++ N + + A+K + L + G S E+ Sbjct: 97 TPFYLYSKPQVVRNFTAYRDALEGLRSIVGYAVKANNNLRVLQLLRELGCGAVLVSGNEL 156 Query: 64 MLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIG 119 L F +N ++ + + ++ L A+ + Sbjct: 157 RLALRAGFDPTRCIFNGNGKTLEDLVLAAESGVFVNIDSEFDLENIVTAARVAGKKVPVL 216 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171 LRINP V S+ G + + S + G+ H Sbjct: 217 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYSNDITLVGVHCHLGSTITK 276 Query: 172 FLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSE 223 F + ++E++++GGG+ D ++E Sbjct: 277 VDIFRDAAGLMVNYVDEIRAQGFELEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVL 336 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIY 282 + + +EPG +++ NT V + N IV A + L Sbjct: 337 SRDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIEL 396 Query: 283 PNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P T + G C + D G+ G + D Y ++ + +N Sbjct: 397 VSPSPDAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKL 456 Query: 339 MPTIAVKNVDGTIKAIRE-FSYND---YYNNLS 367 P DG+I IR S++D +++NLS Sbjct: 457 RPPEYWVEDDGSIAKIRRGESFDDYMKFFDNLS 489 >gi|15611345|ref|NP_222996.1| diaminopimelate decarboxylase [Helicobacter pylori J99] gi|8134398|sp|Q9ZME5|DCDA_HELPJ RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|4154810|gb|AAD05866.1| DIAMINOPIMELATE DECARBOXYLASE [Helicobacter pylori J99] Length = 405 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 73/385 (18%), Positives = 128/385 (33%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLANLGSGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IQRALKAGIKPYKIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G + K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVEEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 S + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLDPITEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNSLQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESAT--I 281 + I EPG +IV + L T VL K VIVD+ + + L + + A I Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 282 YPNTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P G V G C + D F + ++ GD+++ E V Y + + +N Sbjct: 312 TPCGGREISPCDVVGPVCESSDTFLKDANLPELEPGDKLAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|167838175|ref|ZP_02465034.1| diaminopimelate decarboxylase [Burkholderia thailandensis MSMB43] Length = 423 Score = 225 bits (574), Expect = 8e-57, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 120/389 (30%), Gaps = 27/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L + + +A+K + G+ + + G S E Sbjct: 28 GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGHEKFG-GETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G + ++ D A+ + ++ +L++ A L Sbjct: 88 LARVLAAGGRAQNVVFSGVGKNADEMRIALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + ++ ++ +I + +GGG+ T D D ++ E+ Sbjct: 208 ELSPYLDAIDKLLDLVEQIEADGVKIGHVDVGGGLGITYDDETPPDIGAYVRAVLERIDA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I+ EPG ++ N L T V + + KN IVD+++ + A Sbjct: 268 RGHGHREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327 Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + V G C +GD G + GD ++ Y + +N Sbjct: 328 EPVTPRMDVAAAVYDVVGPVCESGDWLGRGRSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + + Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFER 415 >gi|78776669|ref|YP_392984.1| diaminopimelate decarboxylase [Sulfurimonas denitrificans DSM 1251] gi|78497209|gb|ABB43749.1| diaminopimelate decarboxylase [Sulfurimonas denitrificans DSM 1251] Length = 403 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 121/384 (31%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP Y+ D + + K + A+K + + G S+ E Sbjct: 12 KTPLYVYDLDYMSAQYEELKSAFKGRKSIMAFAIKSNSNLSVIKHFATLGSGADCVSIGE 71 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 V ++ K + D I + ++L + + A++L K Sbjct: 72 VYRAVLAGVPNYKIIFSGVGKSDDEITQAIKLDILYINVESEAELGRVELIAKELGAKCR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNC--- 167 + R+NP++ ++ G + SE + G+ FH Sbjct: 132 ISIRVNPNIDPQTHPYISTGLHDNKFGVEIDTAKRMYIKANNSEYLDPVGIHFHIGSQLT 191 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 E K + ++ ++ + + ++++ +GGG+ KD D+ Q + + Sbjct: 192 ELKPIYESAEIVADLVRSLQNIKIELKFFDIGGGLGVKYKDETTITPYDYAQAILSTLKG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280 + + EPG + N T VL K V+VD + + L A Sbjct: 252 LDLTVICEPGRFLTANGGYFLTKVLYEKRNGDKRFVVVDGGMNDLLRPSLYKAYHKIEAI 311 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T A V G C +GD F + + ++ D + Y + +N Sbjct: 312 TESLTKLSEADVVGPVCESGDFFAKGYLLPTLEHNDLLVIHSAGAYGFGMGSNYNTRGRS 371 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D Sbjct: 372 AEVAIKGKEVKLIRKREEFEDLIA 395 >gi|323527565|ref|YP_004229718.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1001] gi|323384567|gb|ADX56658.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1001] Length = 420 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 122/387 (31%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + +A+K + + + + G S E Sbjct: 28 GTPLYVYSRAALTDAWNAYAGACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + E ++ + D +A+ + ++ +L++ A ++ + Sbjct: 88 LARVLAAGGKAENTVFSGVGKHADEMREALAAGVKCFNVESIPELDRLNAVAAQMDRKAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G +D + V G+ H + Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARATYQAAAAMANLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + ++ I I +GGG+ T D D + ++ Sbjct: 208 EVAPYLDAVDKLLELVEQIEQDGLTIRHIDVGGGLGITYDDETPPDIGDFVSTVLDRIEA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 ++Y EPG ++V N L T V + KN IVD+++ + Sbjct: 268 RGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEKNFAIVDAAMNDLARPAMYEAYHVI 327 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 A + + V G C +GD G V+ GD ++ Y + +N Sbjct: 328 DAAVQREVPAHVYDVVGPVCESGDWLGRERLLS-VEPGDLLAIRSAGAYGFVMSSNYNTR 386 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + Sbjct: 387 PRAAEVMVDGTQAHVVRAREEVQQLFA 413 >gi|239814143|ref|YP_002943053.1| diaminopimelate decarboxylase [Variovorax paradoxus S110] gi|239800720|gb|ACS17787.1| diaminopimelate decarboxylase [Variovorax paradoxus S110] Length = 427 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 54/387 (13%), Positives = 113/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ KQ +L+ L + + A+K ++ G+ + G S E Sbjct: 36 GTPLFVYSKQWMLDALAAYQRGFEGRSALICYAMKANSSLGVLRVFAEAGCGFDIVSGGE 95 Query: 63 VMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKK 117 + ++ K A+ + + ++L+ + A+ Sbjct: 96 LARVLAVGADPARIIFSGVGKTRAEMRQALAAGIACFNVESEAELDVLNEVALAEGRRAP 155 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I +RINP+V ++ G +E+ V G+ H + Sbjct: 156 ISIRINPNVDPKTHPYISTGLKGNKFGIAHDRAVEAYRHAARLPGLEVVGIDCHIGSQIT 215 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + ++ + I + GGG+ ++ + Sbjct: 216 EASPYLDACDRVLDLVEAIEAAGVPIHHLDFGGGLGIDYNGEVPPKADALWQQLLARLDA 275 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278 ++ +EPG ++V N T VL + D+++ + Sbjct: 276 RGFGQRKLVIEPGRSLVGNAGVCLTEVLYTKPGEDKNFCIVDAAMNDLPRPAMYQAFQKI 335 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T V G C +GD G V GD ++ Y ++ + +N Sbjct: 336 VPLRIRAGDAPTYDVVGPVCESGDWIGRDRALNVVS-GDLLAVLSAGAYCMSMASNYNTR 394 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + R + D Sbjct: 395 GRAAEVLVSGRSATLIRRRETMEDQLR 421 >gi|159041106|ref|YP_001540358.1| diaminopimelate decarboxylase [Caldivirga maquilingensis IC-167] gi|157919941|gb|ABW01368.1| diaminopimelate decarboxylase [Caldivirga maquilingensis IC-167] Length = 402 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 65/373 (17%), Positives = 116/373 (31%), Gaps = 19/373 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP + D + N + K+L ++K + L + G ++S E Sbjct: 20 DTPLIVYDLNLIEGNYRSIKDSL---NAKVLYSIKANPNLAILAFLRRLGSGADAASPGE 76 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V L F Y AY + + + F++V + + Sbjct: 77 VFLALKAGFKPSEVLYTGAYLSNNDIKYGIDSRVVLNFDSVRAFERAMALGYRPRLVF-F 135 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVN--GLMFHNNCENKSFLC 174 RI+ S+ G D I++ V G+ + Sbjct: 136 RIDLGYGEGFTPGVTLAGEESKFGMFLNDAIKAYRLAKSNGVKEFGIHAMMGSNVLNPDY 195 Query: 175 FSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 F + + ++++ G +I + +GGG K RL + +++ Sbjct: 196 FLKIAELLKEQAKVIEGEVGIKISYFDMGGGFGIPYKPGEKPLDLNRLSALRGFFPGELW 255 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYPNTGP-- 287 +EPG IV N L T V ++ + I VD + + L I N G Sbjct: 256 VEPGRFIVGNAGYLLTRVTEVKKKGNRTYIGVDVGMNVLIRPMLYNAYHHIITCNEGEGS 315 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 V G C D VK GD + + Y + + +NG P V Sbjct: 316 EIVDVVGPICENTDKLAINRELPRVKEGDLLVILNAGAYVYSMSSNYNGRLRPAEVVVYN 375 Query: 348 DGTIKAIREFSYN 360 + + + + Sbjct: 376 NEHAVSRFRETLD 388 >gi|329847898|ref|ZP_08262926.1| diaminopimelate decarboxylase [Asticcacaulis biprosthecum C19] gi|328842961|gb|EGF92530.1| diaminopimelate decarboxylase [Asticcacaulis biprosthecum C19] Length = 458 Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 118/400 (29%), Gaps = 37/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVK---------LLLALKCFAAWGMFDTLNQYM 52 + TP Y+ L + + + + A+K + + TL Sbjct: 25 VGTPVYVYSSATLERHYNVFAGALNASPALRSPKGEAPLVAYAMKANSNLAVLRTLALQG 84 Query: 53 DGTTSSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKD 109 G + S E+ E ++ K A + + +L++ Sbjct: 85 CGADTVSEGEIRKAMTAGVPAEKIVFSGVGKTDAEMAFALKAGIYQLNVESRPELDRLAR 144 Query: 110 KAQ--KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNV--NG 160 A + +RINP V + G ++ ++ + +N+ G Sbjct: 145 VAASLNMIAPFVIRINPGVGSGGHAKITTGGARDKFGISAEEALKLYADAAAHRNLAPVG 204 Query: 161 LMFHNNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYPVKDF--- 214 + H + A ++ +E + LGGG+ + P Sbjct: 205 IACHIGSQITDLTPLQAAFSRMKGWVEALRAEGLSVERLDLGGGLGVPYFNQPAPPHPVD 264 Query: 215 -CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVP 270 + ++ EPG I N L + V+ + E I + D+++ + Sbjct: 265 FAEMAALTVGHLGLRYTFEPGRVIAANAGVLVSRVVHVHERIDSGQKFLVLDAAMNDLIR 324 Query: 271 DYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 LY I P P V G C GD F ++ G+ ++F Sbjct: 325 PA-LYDAYHDIRPVAAPTNDDSDIYDVVGPVCETGDTFTRNRELPRLRAGELVAFMSAGA 383 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +N + + G SY++ Sbjct: 384 YGAVMGSEYNSRPLAPEVLVRDGGFAVVRPRPSYDEMMAR 423 >gi|57168450|ref|ZP_00367584.1| diaminopimelate decarboxylase [Campylobacter coli RM2228] gi|305432869|ref|ZP_07402027.1| diaminopimelate decarboxylase [Campylobacter coli JV20] gi|57020258|gb|EAL56932.1| diaminopimelate decarboxylase [Campylobacter coli RM2228] gi|304444023|gb|EFM36678.1| diaminopimelate decarboxylase [Campylobacter coli JV20] Length = 402 Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 63/384 (16%), Positives = 129/384 (33%), Gaps = 22/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+Y+ D + K ++ A+K + + L + G S+ E Sbjct: 11 QTPFYIYDFDFIKERFLKLKNAFKARKSQIFYAVKANSNLSLLQMLVKLDSGFDCVSIGE 70 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 V ++ K E + D I + +++ + A++L+ K Sbjct: 71 VKRALKAGAKSYKIIFSGVGKTQEELRLALEYDILYINLESEAEMMLLESVAKELNLKAR 130 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE-- 168 + R+NP+V+ ++ G + + G+ FH + Sbjct: 131 ISIRVNPNVNAKTHPYISTGLNENKFGVEIDLARKMYLYAKNSPHLEPIGVHFHIGSQLL 190 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV----KDFCQRLKEFSE 223 +A++ + +E ++++ +GGG+ + V D+ Q + Sbjct: 191 DISPIHEAAAIVAKLVRELKALQIELKFFDIGGGLGVRYEKEDVEPDLYDYAQGILAQLH 250 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 V I +EPG +V N+ +VL K VIVD ++ + L + Sbjct: 251 GLDVTIGMEPGRFLVANSGEFVCSVLYEKHNKTKRFVIVDGAMNDLIRPSLYEAYHEILL 310 Query: 283 PNTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P V G C +GD F + + GD + ++ Y + + +N N Sbjct: 311 PYNQGEESPCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKV 370 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + ++ D Sbjct: 371 CELALEEGQVRLIRQRENFEDQIA 394 >gi|313886522|ref|ZP_07820238.1| carboxynorspermidine decarboxylase [Porphyromonas asaccharolytica PR426713P-I] gi|312924068|gb|EFR34861.1| carboxynorspermidine decarboxylase [Porphyromonas asaccharolytica PR426713P-I] Length = 388 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 110/378 (29%), Positives = 192/378 (50%), Gaps = 16/378 (4%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TPYYL+++ L NL+ + + AGV+++LA K +A W F +Y+ +T+SS +E Sbjct: 11 TPYYLLEESLLRRNLELIRSVAERAGVEIILAFKAYALWRTFPIFKEYIHASTASSPWEA 70 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121 LG+E+ G HAY AY + I + I N+ +Q +F + + GLR Sbjct: 71 RLGYEEMGAPVHAYTPAYSEDNITDFVRYSSHITLNSPTQWQRFGPASPYAAEHISYGLR 130 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLMFHNNCENKSFLCFSA 177 +N + S K + +P P +R G + + E + + G+ H CE Sbjct: 131 LNLAYSPVKTEIYNPALPGTRFGVSAETLRQMEQEGTLTGLEGVHLHVLCE-GDDEQLEL 189 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEA 236 +L+ +E+ FG + +++W++LGGG T ++Y + L+ F E++ ++ +EPG A Sbjct: 190 VLERLEERFGFILDKVQWLNLGGGHLMTHREYDTEHLVALLRAFRERHPNLRVIMEPGSA 249 Query: 237 IVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESA-------TIYPNTGPY 288 T L V+DI N I++ S H+PD L P G + Sbjct: 250 FAWQTGDLYAQVVDIVTNDDIKTAIMNVSFACHMPDCLEMPYHPVVEGATQCDTPEAGTH 309 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 + + G SCL+GD G + F+ P++IG+ + +D+ Y + N FNG+ P IA++++D Sbjct: 310 SYRLGGNSCLSGDYMGYWTFDHPLEIGETLVLKDMLHYTTVKTNMFNGVQHPAIALRHLD 369 Query: 349 GTIKAIREFSYNDYYNNL 366 G+++ +R F Y+DY + + Sbjct: 370 GSVEMLRSFDYSDYKSRM 387 >gi|167582586|ref|ZP_02375460.1| diaminopimelate decarboxylase [Burkholderia thailandensis TXDOH] Length = 423 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 58/389 (14%), Positives = 121/389 (31%), Gaps = 27/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L + + +A+K + G+ + + G S E Sbjct: 28 GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G + ++ K D A+ + ++ +L++ A L Sbjct: 88 LARVLAAGGRAQNVVFSGVGKSADEMRIALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + ++ ++ +I + +GGG+ T D D ++ E+ Sbjct: 208 ELSPYLDAIDKLLDLVEQIEADGVKIHHVDVGGGLGITYDDETPPDIGAYVRAVLERIDA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I+ EPG ++ N L T V + + KN IVD+++ + A Sbjct: 268 RGHGHREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327 Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + V G C +GD G + GD ++ Y + +N Sbjct: 328 EPVTPRTDVAAAVYDVVGPVCESGDWLGRDRSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + + Sbjct: 387 RPRAAEVIVDGASAYLVRPRETVESLFER 415 >gi|294791044|ref|ZP_06756202.1| diaminopimelate decarboxylase [Scardovia inopinata F0304] gi|294458941|gb|EFG27294.1| diaminopimelate decarboxylase [Scardovia inopinata F0304] Length = 444 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 58/406 (14%), Positives = 118/406 (29%), Gaps = 44/406 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP D ++ N + A ++ + A K F+ +++ ++Q S Sbjct: 28 GTPVIAYDVSRIRRNYRAFRQAFEKAKIRSVISYASKAFSCKAVYNLIDQEGGHVDVVSG 87 Query: 61 YEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--- 114 E+ F E +++ ++ A+ S II + ++ ++ Sbjct: 88 GELATALAAGFPPERISFHGNNKSQEELTFALKSKVGLIIIDNFHEIELLQNMLPSPRSA 147 Query: 115 ------HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVN 159 I LRI P VS + S+ G + + Sbjct: 148 HRDQVEPAHIMLRITPGVSAHTHDYISTGQTDSKFGFDLASGQADRALQKVLADSRFCME 207 Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDFC 215 G+ H + F A+ + + + + +LGGG D Sbjct: 208 GIHAHIGSQIFDPYAFQALARIMINLAARWRRDFGYCAQSVNLGGGFGIAYNQEDDPDDV 267 Query: 216 QRLKEFSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS 264 + + Q +++EPG ++V + TV + + Sbjct: 268 EDFVQSLSSSIRQAAADLSFPLPTVWIEPGRSLVGSAACTLYTVGSRKDIPGYNSYIFVD 327 Query: 265 --VEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 + ++ L T + G+ C +GD+ + GD + Sbjct: 328 GGMGDNIRPALYRARYQAFLAKNPVGRPAETVRIAGKYCESGDVLCWDQALPQTQPGDIL 387 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N P + IR SY D Sbjct: 388 AIPATGAYGYSMASNYNRNPRPAVVFVEDGHPQLVIRRESYEDLIR 433 >gi|332290670|ref|YP_004429279.1| diaminopimelate decarboxylase [Krokinobacter diaphorus 4H-3-7-5] gi|332168756|gb|AEE18011.1| diaminopimelate decarboxylase [Krokinobacter diaphorus 4H-3-7-5] Length = 401 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 120/386 (31%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D + + + K+ ++L A+K + + L G + S+ Sbjct: 14 GSPVYVYDAETITAQYNRLTNAFKDVKQLRLNYAVKALSNISILQHLKSLGSGLDTVSIQ 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG F + + EI+ V I + +S L +F K + Sbjct: 74 EVQLGLLAGFTPDRIIFTPNGVSLAEIEEVAQMGVQINIDNLSILEQFGTK--HPQIPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173 +R+NP V S+ G N+NG+ H + Sbjct: 132 IRVNPHVMAGGNTNISVGHIDSKFGISIHQLPHVLRIVENTGMNINGIHMHTGSDILDID 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230 F + I + + + +I G G K+ ++ + L E K Sbjct: 192 VFVYATE-ILFDAAQKFSDLTFIDFGSGFKVPYKEGDIETNIEELGEKLGKRFNAFAKSY 250 Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESA--T 280 EPG+ +V+ V + + VDS + L + Sbjct: 251 GKPLTLTFEPGKFLVSEAGKFLVQVNVVKQTTSTVFAQVDSGFNHLIRPMLYGSQHEIRN 310 Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I G V G C D F + GD ++F++ Y + +N Sbjct: 311 ISNPKGRERFYSVVGYICET-DTFANNRRISEISEGDILAFDNAGAYCFTMASNYNSRYR 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + ++ D +N Sbjct: 370 PAEVLIKNGEAHLIRKRETFEDLISN 395 >gi|315150595|gb|EFT94611.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0012] Length = 436 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 35 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 95 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 335 RPALYQAVYDGFLANRDGHDSVKKVTVVGKYCESGDVLLRDVLLPEVKAGDLLAISSTGA 394 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431 >gi|162453832|ref|YP_001616199.1| hypothetical protein sce5556 [Sorangium cellulosum 'So ce 56'] gi|161164414|emb|CAN95719.1| unnamed protein product [Sorangium cellulosum 'So ce 56'] Length = 435 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 118/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y D +++ N + V + A+K + L G ++S Sbjct: 21 GTPLYAYDAERIRENFRRLTRALRGNYPEVSVFYAIKACNNLEIAKLLVDEGSGVDAASP 80 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ L GE Y D ++ A L + L + + Sbjct: 81 NEIRLAQALGLSGERIIYTGNSLSDEDLAAGLRAGVNFNVDDHGILKRLFSIGKPRCMSF 140 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172 + + L P ++ G + E+ + G+ + + Sbjct: 141 RINPSGEDIA-TPDLKPFAGPSAKFGIHPRHVEEAYRTALENGVERLGVHMMPHSQAHKP 199 Query: 173 LCFSAML----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKE 220 F+ + I + ++ +GGG+ + +++ Sbjct: 200 ENFAHVTGKLLDLIGPVARKLGFDLAFVDIGGGLGIPYRREQPPLDVEAVARGIAAMVRK 259 Query: 221 FSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 ++ ++ +EPG V + + V+ I + K ++ D S+ + Sbjct: 260 KCAEHGLKEPRLVMEPGRYFVGDAGYVLGRVISIKQGYKTIIGTDISMNTMARPVMYGAY 319 Query: 278 SATIYPNTGPYTAMVC--GRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNWF 334 G TA + G+ C D++ F V GD + D Y + Sbjct: 320 HEVRINGRGGQTAPMAMTGQVCENTDMWIPEREFPADVAEGDVVVLMDAGAYGHVMSYDY 379 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 NG P + + + R ++ D + + Sbjct: 380 NGRLRPAEVLIDGGKSRLIRRRDTFEDMVSRM 411 >gi|294779094|ref|ZP_06744505.1| diaminopimelate decarboxylase [Enterococcus faecalis PC1.1] gi|294453819|gb|EFG22210.1| diaminopimelate decarboxylase [Enterococcus faecalis PC1.1] gi|323480667|gb|ADX80106.1| diaminopimelate decarboxylase [Enterococcus faecalis 62] Length = 430 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 29 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 88 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 89 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLTTRNQT 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 149 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 209 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 268 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 269 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 328 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 329 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 389 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 425 >gi|257416043|ref|ZP_05593037.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis AR01/DG] gi|257157871|gb|EEU87831.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis ARO1/DG] Length = 436 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 35 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 95 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 335 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431 >gi|300861365|ref|ZP_07107452.1| diaminopimelate decarboxylase [Enterococcus faecalis TUSoD Ef11] gi|295112942|emb|CBL31579.1| diaminopimelate decarboxylase [Enterococcus sp. 7L76] gi|300850404|gb|EFK78154.1| diaminopimelate decarboxylase [Enterococcus faecalis TUSoD Ef11] Length = 430 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 29 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 88 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 89 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 149 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 209 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 268 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 269 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 328 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 329 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 389 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 425 >gi|229545884|ref|ZP_04434609.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1322] gi|255975909|ref|ZP_05426495.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T2] gi|256853066|ref|ZP_05558436.1| diaminopimelate decarboxylase [Enterococcus faecalis T8] gi|256965181|ref|ZP_05569352.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis HIP11704] gi|257082601|ref|ZP_05576962.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis E1Sol] gi|257419240|ref|ZP_05596234.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T11] gi|307273284|ref|ZP_07554530.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0855] gi|307278506|ref|ZP_07559580.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0860] gi|307291495|ref|ZP_07571378.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0411] gi|229308952|gb|EEN74939.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1322] gi|255968781|gb|EET99403.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T2] gi|256711525|gb|EEU26563.1| diaminopimelate decarboxylase [Enterococcus faecalis T8] gi|256955677|gb|EEU72309.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis HIP11704] gi|256990631|gb|EEU77933.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis E1Sol] gi|257161068|gb|EEU91028.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T11] gi|306497455|gb|EFM66989.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0411] gi|306504849|gb|EFM74045.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0860] gi|306510269|gb|EFM79293.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0855] gi|315029577|gb|EFT41509.1| diaminopimelate decarboxylase [Enterococcus faecalis TX4000] gi|315144475|gb|EFT88491.1| diaminopimelate decarboxylase [Enterococcus faecalis TX2141] gi|315147212|gb|EFT91228.1| diaminopimelate decarboxylase [Enterococcus faecalis TX4244] gi|315160504|gb|EFU04521.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0645] Length = 436 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 35 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 95 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 335 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431 >gi|229550075|ref|ZP_04438800.1| diaminopimelate decarboxylase [Enterococcus faecalis ATCC 29200] gi|255972853|ref|ZP_05423439.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T1] gi|256619013|ref|ZP_05475859.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis ATCC 4200] gi|256958924|ref|ZP_05563095.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis DS5] gi|257078955|ref|ZP_05573316.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis JH1] gi|257422677|ref|ZP_05599667.1| diaminopimelate decarboxylase [Enterococcus faecalis X98] gi|307271076|ref|ZP_07552359.1| diaminopimelate decarboxylase [Enterococcus faecalis TX4248] gi|307275020|ref|ZP_07556183.1| diaminopimelate decarboxylase [Enterococcus faecalis TX2134] gi|312900700|ref|ZP_07759997.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0470] gi|312951434|ref|ZP_07770331.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0102] gi|229304779|gb|EEN70775.1| diaminopimelate decarboxylase [Enterococcus faecalis ATCC 29200] gi|255963871|gb|EET96347.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T1] gi|256598540|gb|EEU17716.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis ATCC 4200] gi|256949420|gb|EEU66052.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis DS5] gi|256986985|gb|EEU74287.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis JH1] gi|257164501|gb|EEU94461.1| diaminopimelate decarboxylase [Enterococcus faecalis X98] gi|306508468|gb|EFM77575.1| diaminopimelate decarboxylase [Enterococcus faecalis TX2134] gi|306512574|gb|EFM81223.1| diaminopimelate decarboxylase [Enterococcus faecalis TX4248] gi|310630590|gb|EFQ13873.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0102] gi|311292181|gb|EFQ70737.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0470] gi|315033910|gb|EFT45842.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0017] gi|315036920|gb|EFT48852.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0027] gi|315152542|gb|EFT96558.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0031] gi|315155821|gb|EFT99837.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0043] gi|315158012|gb|EFU02029.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0312] gi|315166786|gb|EFU10803.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1341] gi|327535074|gb|AEA93908.1| diaminopimelate decarboxylase [Enterococcus faecalis OG1RF] Length = 436 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 35 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 95 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLTTRNQT 154 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 335 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431 >gi|83721058|ref|YP_443535.1| diaminopimelate decarboxylase [Burkholderia thailandensis E264] gi|167620699|ref|ZP_02389330.1| diaminopimelate decarboxylase [Burkholderia thailandensis Bt4] gi|257137679|ref|ZP_05585941.1| diaminopimelate decarboxylase [Burkholderia thailandensis E264] gi|83654883|gb|ABC38946.1| diaminopimelate decarboxylase [Burkholderia thailandensis E264] Length = 423 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 58/389 (14%), Positives = 121/389 (31%), Gaps = 27/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L + + +A+K + G+ + + G S E Sbjct: 28 GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G + ++ K D A+ + ++ +L++ A L Sbjct: 88 LARVLAAGGRAQNVVFSGVGKSADEMRIALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + ++ ++ +I + +GGG+ T D D ++ E+ Sbjct: 208 ELSPYLDAIDKLLDLVEQIEADGVKIHHVDVGGGLGITYDDETPPDIGAYVRAVLERIDA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I+ EPG ++ N L T V + + KN IVD+++ + A Sbjct: 268 RGHGHREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327 Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + V G C +GD G + GD ++ Y + +N Sbjct: 328 EPVTPRTDVAAAVYDVVGPVCESGDWLGRDRSLA-IAPGDLLAIRSAGAYGFTMSSNYNA 386 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + + Sbjct: 387 RPRAAEVIVDGASAYLVRPRETVESLFER 415 >gi|227518697|ref|ZP_03948746.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0104] gi|227553306|ref|ZP_03983355.1| diaminopimelate decarboxylase [Enterococcus faecalis HH22] gi|227073877|gb|EEI11840.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0104] gi|227177561|gb|EEI58533.1| diaminopimelate decarboxylase [Enterococcus faecalis HH22] gi|315575921|gb|EFU88112.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0309B] gi|315580574|gb|EFU92765.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0309A] Length = 436 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 35 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 95 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 335 RPALYQAVYDGFLANRDGHDSVKEVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431 >gi|29376071|ref|NP_815225.1| diaminopimelate decarboxylase [Enterococcus faecalis V583] gi|29343533|gb|AAO81295.1| diaminopimelate decarboxylase [Enterococcus faecalis V583] Length = 430 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 29 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 88 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 89 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 149 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 209 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 268 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 269 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 328 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 329 RPALYQAVYDGFLANRDGHDSVKEVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 389 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 425 >gi|297172094|gb|ADI23076.1| diaminopimelate decarboxylase [uncultured gamma proteobacterium HF0770_07M15] Length = 432 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 65/396 (16%), Positives = 117/396 (29%), Gaps = 36/396 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L ++ + A+K + G+ TL G + S E Sbjct: 26 GTPLYVYSSKTLTDHFTKLSNALAPLDHLICFAMKSNSNLGVLRTLADLGSGFDTVSGGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + + K + A + ++L + A KL K Sbjct: 86 IQRAIAAGGNPKKCVFAGVGKTADEIAFALRKGIYCFNVESEAELERINRIAGKLKKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I +R+NP+V ++ G + + G+ H + Sbjct: 146 IAIRVNPNVDAKTHKKITTGTYENKFGIAIEKIPALYARGAKLKHIRLRGVQMHIGSQLT 205 Query: 171 SFLCFSAMLKNIEKEFGH--FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF------- 221 F+ ++ I IE+IS+GGG+ +D V K Sbjct: 206 QVKPFADAVRKIAPLAAKLKAKHGIEFISIGGGLGIMYEDALVSGNADWWKRKEAKNILT 265 Query: 222 -----------SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHV 269 + +++ LEPG I N L T V + K IVD+++ + Sbjct: 266 PAKYAATLVPLLQPLGLKVLLEPGRFISGNAGILVTRVEYVKRTGKKYFAIVDAAMNDLL 325 Query: 270 PDYLLYQESATIYPNTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + P V G C GD F + V GD ++ Y Sbjct: 326 RPAFYESYHEIVPVKQSKARPVNTDVVGGICETGDTFCKDRPIPRVAEGDLVAILSAGAY 385 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 +N +P + + + + Sbjct: 386 GFVMAGTYNTRPLPAEVLVKGKKSAIVRKRQKVKEI 421 >gi|120435107|ref|YP_860793.1| diaminopimelate decarboxylase [Gramella forsetii KT0803] gi|117577257|emb|CAL65726.1| diaminopimelate decarboxylase [Gramella forsetii KT0803] Length = 411 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 72/383 (18%), Positives = 129/383 (33%), Gaps = 26/383 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P Y+ D K+++ K +++ A+K + + L G + S+ EV Sbjct: 15 SPVYVYDADKIISQYQRLTDAFKVNELRIHYAVKALSNISILKLLGSLGCGLDTVSVQEV 74 Query: 64 MLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 LG Y EI+ V+ I + +S L +F K + +R Sbjct: 75 RLGLKAGVDPSKIIYTPNGVSLEEIEEVVQLGVQINIDNLSVLEQFGTK--HPKIPVCIR 132 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLCF 175 INP V S+ G +E+ ++NG+ H + F Sbjct: 133 INPHVMAGGNSKISVGHIDSKFGISIHQMPHLLRIVENTEMHINGIHMHTGSDILDIGVF 192 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--------KEFSEKYSV 227 + I E ++E+I G G ++ ++ + L K+F ++Y Sbjct: 193 LYASE-ILFEAAKNFKELEFIDFGSGFKVPYREGDIETDIEDLGVQLTQKFKKFCKEYGR 251 Query: 228 QIYL--EPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES---ATI 281 ++ L EPG+ +V+ + V I + +DS + Sbjct: 252 ELALAFEPGKFLVSESGKFLAKVNVIKQTTSTVFAGIDSGFNHLIRPMFYGSHHDITNIS 311 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 PN P V G C D FG ++ GD +SF + Y + + FN P Sbjct: 312 NPNAKPRFYSVVGYICET-DTFGNNRRISEIREGDILSFSNAGAYCFSMASNFNSRYRPP 370 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + ++ D Sbjct: 371 EVMWYNGKAHLIRERETFEDLTR 393 >gi|121997989|ref|YP_001002776.1| diaminopimelate decarboxylase [Halorhodospira halophila SL1] gi|121589394|gb|ABM61974.1| diaminopimelate decarboxylase [Halorhodospira halophila SL1] Length = 418 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 58/382 (15%), Positives = 110/382 (28%), Gaps = 24/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + AG + A+K + L ++ G S E Sbjct: 29 GTPCYVYSRAAIEERWALYRSALGVAG-DVCYAVKANGNLALLQLLARHGAGFDIVSGGE 87 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K D A+ + + ++L + A + Sbjct: 88 LERVLHAGGDAARVVFSGVGKGTDEIRRALQAGIRCFNVESAAELERIASVAATENTPAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 + LR+NP V+ S+ G + V G+ H + Sbjct: 148 VALRVNPDVNPETHPYIATGLAQSKFGIALEEAEALYLQAANDPRLEVRGIACHIGSQLL 207 Query: 171 SFLC---FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE---FSEK 224 S + L + + ++ I GGG+ D + ++ Sbjct: 208 SVAPLTEAAERLAALARRLQEQGISLDHIDAGGGLGVHYIDEQPPTPAEHIEAISAPLRD 267 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283 V + +EPG AIV L T + + N K IVD+ + ++ L Sbjct: 268 LGVSVLVEPGRAIVAEAGILLTRIEYLKHNGGKEFAIVDAGMNDYLRPALYDAAHTLEAV 327 Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 V G C + D F G ++ Y + +N P Sbjct: 328 TPSEAELRPVDVVGPVCESADTFARDCTLP-AAAGGLLAIRSAGAYGAVMASQYNARPRP 386 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + R + ++ Sbjct: 387 PEVLVDGTQAHLIRRRETIDEL 408 >gi|307299389|ref|ZP_07579190.1| diaminopimelate decarboxylase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915185|gb|EFN45571.1| diaminopimelate decarboxylase [Thermotogales bacterium mesG1.Ag.4.2] Length = 375 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 64/367 (17%), Positives = 123/367 (33%), Gaps = 10/367 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D +K+ + A + + +++ ALK + + + G S E Sbjct: 12 GTPLYVYDAEKIRKRIKKAKTVFEGLDAEIVFALKANNNPALLKIMAEEEIGADVVSRGE 71 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + L + G + +N K E N I S ++ LR+ Sbjct: 72 L-LASKMAGMKRILWNGNGKTHEDITHFVNQGLNIVCIDSLQEL--PLWDGVNVIKLLRV 128 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 NP V + G +K+ ++G+ H + F Sbjct: 129 NPDVDARTHPHISTGLRAHKFGVPI-EKVSEVADRIDGIHLHIGSQITDVEPFFDAYSKA 187 Query: 183 EKEFGHFITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 + ++I LGGG + + ++ + + + ++ E G I+ Sbjct: 188 LDCAKQYG--FKYIDLGGGWGIDYEGKELDIERLQKGISGIFAGFDGKLIAELGRFIIGP 245 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES--ATIYPNTGPYTAMVCGRSCL 298 L T V+ + + K ++ D+ + A + L + TA V G C Sbjct: 246 AGYLVTKVVSVKPSEKIFIVTDAGMNALIRPVLYDAHHRIQVLASTKKTVTADVVGPLCE 305 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 +GDI + G I E+ Y + N +NG+ P + + + R S Sbjct: 306 SGDILARGRKLEVPIPGTAIVLENAGAYGFSMANNYNGMPFPAEVLVDGEEVKLIRRRQS 365 Query: 359 YNDYYNN 365 + + N Sbjct: 366 IEELFTN 372 >gi|256961983|ref|ZP_05566154.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis Merz96] gi|293382282|ref|ZP_06628221.1| diaminopimelate decarboxylase [Enterococcus faecalis R712] gi|293389458|ref|ZP_06633915.1| diaminopimelate decarboxylase [Enterococcus faecalis S613] gi|307289045|ref|ZP_07569001.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0109] gi|312907476|ref|ZP_07766467.1| diaminopimelate decarboxylase [Enterococcus faecalis DAPTO 512] gi|312910094|ref|ZP_07768941.1| diaminopimelate decarboxylase [Enterococcus faecalis DAPTO 516] gi|256952479|gb|EEU69111.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis Merz96] gi|291080227|gb|EFE17591.1| diaminopimelate decarboxylase [Enterococcus faecalis R712] gi|291081075|gb|EFE18038.1| diaminopimelate decarboxylase [Enterococcus faecalis S613] gi|306499754|gb|EFM69115.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0109] gi|310626504|gb|EFQ09787.1| diaminopimelate decarboxylase [Enterococcus faecalis DAPTO 512] gi|311289367|gb|EFQ67923.1| diaminopimelate decarboxylase [Enterococcus faecalis DAPTO 516] gi|315163956|gb|EFU07973.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1302] Length = 436 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 35 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 95 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 335 RPALYQAVYDGFLANRDGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431 >gi|256762439|ref|ZP_05503019.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T3] gi|256683690|gb|EEU23385.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T3] Length = 436 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 35 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 95 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLTTRNQT 154 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 335 RPALYQAVYDGFLANRDGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431 >gi|257089826|ref|ZP_05584187.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis CH188] gi|312903248|ref|ZP_07762428.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0635] gi|256998638|gb|EEU85158.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis CH188] gi|310633124|gb|EFQ16407.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0635] gi|315577593|gb|EFU89784.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0630] Length = 436 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 128/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 35 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 95 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A V G+ C +GD+ VK GD ++ Sbjct: 335 RPALYQAVYDGFLANREGYDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431 >gi|257086803|ref|ZP_05581164.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis D6] gi|256994833|gb|EEU82135.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis D6] gi|315027325|gb|EFT39257.1| diaminopimelate decarboxylase [Enterococcus faecalis TX2137] Length = 436 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 128/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 35 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 95 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A V G+ C +GD+ VK GD ++ Sbjct: 335 RPALYQAVYDGFLANREGYDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431 >gi|167564379|ref|ZP_02357295.1| diaminopimelate decarboxylase [Burkholderia oklahomensis EO147] gi|167571526|ref|ZP_02364400.1| diaminopimelate decarboxylase [Burkholderia oklahomensis C6786] Length = 423 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 59/391 (15%), Positives = 123/391 (31%), Gaps = 27/391 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L D + +A+K + G+ + + G S E Sbjct: 28 GTPLFVYSRAALTAAYDAYAKACAGRRASVHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G + ++ K D A+ + + +L++ A L Sbjct: 88 LARVLAAGGRAQNVVFSGVGKSADEMRAALEAGVKCFNVESTPELDRLNAVAASLGKRAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G + + +V G+ H + Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDEARATYRAAAALPNLDVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + ++ ++ +I + +GGG+ T D D ++ E+ Sbjct: 208 ELSPYLDAIDKLLDLVEQIEADGVKIHHVDVGGGLGITYDDETPPDIGAYVRAVLERIDA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I+ EPG ++ N L T V + + + KN IVD+++ + A Sbjct: 268 RGHGHREIWFEPGRSLTGNAGILLTRVEFLKQGDEKNFAIVDAAMNDLARPAMYEAFHAI 327 Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + V G C +GD G + GD ++ Y + +N Sbjct: 328 EPVKPRTDIATAVYDVVGPVCESGDWLGRERSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + + + S Sbjct: 387 RPRAAEVIVDGANAYLVRPRETVESLFERES 417 >gi|126650126|ref|ZP_01722359.1| diaminopimelate decarboxylase [Bacillus sp. B14905] gi|126593298|gb|EAZ87260.1| diaminopimelate decarboxylase [Bacillus sp. B14905] Length = 449 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + + + K GVK + A K FA ++ + S Sbjct: 40 GTPLFVYDTALIRKRARSFIDTFKKLGVKAEVAYASKAFACVAVYQLAAEENLSLDVVSG 99 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K S I+ + ++ K+ +++ +K Sbjct: 100 GELFTAIKAGFPAERIHFHGNNKSISELELAFDSKIGCIVVDNFYEIQLLKEISERRQQK 159 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKN----VNGLMFHNN 166 + LR+ P V + S+ G + + + + GL H Sbjct: 160 MRILLRVTPGVEAHTHDFITTGQADSKFGFDLNNGQADEAFQQTFNHEFLELLGLHCHIG 219 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----------KDYPV 211 + F ++ I ++LGGG + Sbjct: 220 SQIFDTAGFGLAGEKLIDKISDWNKAHGFTCTVLNLGGGFGIRYTEEDAPLEPQVYVEDM 279 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 + +I++EPG ++V + T+ +++ + VD + ++ Sbjct: 280 ITVVKNKATVLGLKMPEIWIEPGRSLVGDAGISLYTIGSQKTVPDVRKYIAVDGGMSDNI 339 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I + V G+ C +GD + GD ++ Sbjct: 340 RPALYDAKYEAIIASKANEPKNEIYTVAGKLCESGDKLIIDAKLQDAASGDILAIFCTGA 399 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + P + AIR SY D N Sbjct: 400 YGYSMASNYNRVPRPAVVFVENGQHQLAIRRESYEDIVQN 439 >gi|254472266|ref|ZP_05085666.1| diaminopimelate decarboxylase [Pseudovibrio sp. JE062] gi|211958549|gb|EEA93749.1| diaminopimelate decarboxylase [Pseudovibrio sp. JE062] Length = 423 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 62/388 (15%), Positives = 117/388 (30%), Gaps = 25/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y + + A+K + + L + G S Sbjct: 25 VGTPFYCYSRATFERHFKVFDGAFDGIDHLTCYAMKANSNIAILTVLAKLGAGADVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ K + N + +L + + A ++ Sbjct: 85 ELRRALKAGIPANKIVFSGVGKTRQEMRFALNAGILCFNVESEPELKRLSEVASEMGKTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169 I LRINP V ++ G + + V G+ H + Sbjct: 145 PISLRINPDVDAKTHAKISTGLAANKFGIAWDRARAVYNEAAQLPGLKVTGMDMHIGSQI 204 Query: 170 K---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222 F L + +IE + +GGG+ + ++ + +++ Sbjct: 205 TELGPFDDALERLGVLIGMLKEDGIEIEHLDVGGGLGIPYGGGIEAPLPTEYAKIVRKHI 264 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+ V + EPG I N L T + E KN VIVD+++ + L Sbjct: 265 ERLGVTLITEPGRLIAGNAGILVTETIYRKEGEPKNFVIVDAAMNDLIRPTLYEAHHDIG 324 Query: 282 YPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + A V G C GD + GD ++ Y + +N Sbjct: 325 AVSEERQNGEQMLADVVGPVCETGDYIARDRELPKFEEGDLLAVYSCGAYGATQSGTYNT 384 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D + SY++ N Sbjct: 385 RLLVPEVLVDGDKFAIIRQRPSYDELLN 412 >gi|187776745|ref|ZP_02993218.1| hypothetical protein CLOSPO_00260 [Clostridium sporogenes ATCC 15579] gi|187775404|gb|EDU39206.1| hypothetical protein CLOSPO_00260 [Clostridium sporogenes ATCC 15579] Length = 428 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 71/398 (17%), Positives = 124/398 (31%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + +N + K+ A K F M + + + S E Sbjct: 29 GTPLYVMDETLIRDNCRRYVTSFNKEKNKVAYAGKAFLTKAMCNLIKEEGLYLDVVSGGE 88 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + F E ++ K E + N T + + +L+ + + + K Sbjct: 89 IFTAYKSGFPMEKVYFHGNNKTIEEIEMAINLGVGTFVADNFQELDIIDNACKNKNIKQR 148 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 LRI P + + S+ G D E E G H + Sbjct: 149 VILRIIPGIEAHTHEYIKTGQIDSKFGFTLIDNGAIKAVKKAYELENIQFVGFHCHIGSQ 208 Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 MLK I++ IE + LGGG KD + + Sbjct: 209 IFETKPYEEEIEIMLKLIKRTNKELNIDIEELDLGGGFGIYYKDGDKPKEIEEFCKIILD 268 Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 +EPG +IV N+ +V I E V + + ++ Sbjct: 269 KVKNYSKEIGVREPVLIIEPGRSIVGNSGVTLYSVGSIKEIPNVAKYVAVNGGMTDNIRP 328 Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L E + N + G+ C +GD+ V+ D + + Y Sbjct: 329 ALYKSEYECVVCNKALDNLLEEVKIVGKCCESGDVLINNVKLPIVETNDLFAILNTGAYG 388 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N +P++ N D R SY + N Sbjct: 389 YSMASNYNKALLPSVVFVNNDKVKLVCRRQSYENLIQN 426 >gi|297584485|ref|YP_003700265.1| diaminopimelate decarboxylase [Bacillus selenitireducens MLS10] gi|297142942|gb|ADH99699.1| diaminopimelate decarboxylase [Bacillus selenitireducens MLS10] Length = 444 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 67/402 (16%), Positives = 128/402 (31%), Gaps = 37/402 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + + + A V+ + A K F+ MF ++ S Sbjct: 30 GTPLYVYDVKDIRDRAEAFKSAFERASVQYQVAYASKAFSCVAMFQLADELGLSLDVCSG 89 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDK--AQKLH 115 E+ E F + ++ K + + N I+ + ++L A++L Sbjct: 90 GELYTALEADFPVDRIHFHGNNKTADELEMAVNERIGCIVVDNFTELTWLMAITEAKELP 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + +RI P V + S+ G + + ++ G+ H Sbjct: 150 MDVLIRITPGVEAHTHEYISTGQEDSKFGFDLNSGQATKAIDMIMNHDHLHLLGVHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212 + F +K I K + + E +++GGG ++ Sbjct: 210 SQIFKTEGFEHAVKEIYKSLEKWKDDLGYEPEVLNVGGGFGIRYSEHDEPLPIGDYIDKT 269 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + + +I++EPG A+V T T+ E VD + ++ Sbjct: 270 VQAARSEADKRGMNVPEIWIEPGRAMVGEAGTTLYTIGSRKEIPTLRTYLSVDGGMTDNI 329 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + N G V GR C +GD+ GD ++ Sbjct: 330 RPALYQAEYEAVVANKGHAPEEELVSVAGRCCESGDMLIWDLKIPETAPGDLLAVSSTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 Y + +N + P + I +Y D S Sbjct: 390 YGYAMASNYNRMLRPAVVFVEDGEYECVIERENYADLVRKES 431 >gi|121602458|ref|YP_988394.1| diaminopimelate decarboxylase [Bartonella bacilliformis KC583] gi|120614635|gb|ABM45236.1| diaminopimelate decarboxylase [Bartonella bacilliformis KC583] Length = 424 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 64/387 (16%), Positives = 112/387 (28%), Gaps = 26/387 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L+ + + + A+K + + L G S Sbjct: 25 VGTPFYCYSSGALVAHFKEYQEAFHDMPSLIAYAVKANSNQAVLRILAAKGAGADVVSEG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y+ K + D + +L + +A L K Sbjct: 85 ELRRALAVGITPQRIVYSGVGKTVREIDFALSQDIFCFNVESEPELEQLSARAVALSKTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 LRINP V R ++ G K + V G+ H + Sbjct: 145 RISLRINPDVDAKTHKKITTGRFDNKFGIPLSLACSAYKKAAQLPGLQVRGMDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVK-----DFCQRLKEF 221 F H I I +GGG+ + D+ +++ Sbjct: 205 CDLKPFEDAFLIAADFVRHLWREGYAITHIDIGGGLGISYHPEQNMVPSPADYAALVRKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + I LEPG +I + L T+V+ + +N V+VD ++ + L Sbjct: 265 IAPLGINIILEPGRSIAGHAGVLVTSVIYLKRGEGRNFVVVDGAMNDFLRPTLYDAWQTV 324 Query: 281 IYPNTGPYTAM-----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P A + G C GD G V GD ++ Y + +N Sbjct: 325 VPVKKAPEDAPLIMADIVGPVCETGDYLGLNRSLPMVAAGDLLAITGAGAYGAVMASTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDY 362 + + Y Sbjct: 385 SRLLVPEILVQNTRYDVIRPRLDYEQL 411 >gi|163786031|ref|ZP_02180479.1| diaminopimelate decarboxylase [Flavobacteriales bacterium ALC-1] gi|159877891|gb|EDP71947.1| diaminopimelate decarboxylase [Flavobacteriales bacterium ALC-1] Length = 401 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 70/386 (18%), Positives = 122/386 (31%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D + + +K+ A+K + + N G + S+ Sbjct: 14 GSPVYVYDAEIITAQYKRLTKAFDKVKQLKINYAVKALSNISILKLFNTLGSGIDTVSIQ 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG F E + EI+ V I + +S L +F K + Sbjct: 74 EVQLGLKAGFKAEDIIFTPNGVSLEEIEEVSKLGVQINIDNLSVLEQFGTK--HPTIPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 +RINP V S+ G +E+ +NG+ H + Sbjct: 132 IRINPHVMAGGNTNISVGHIDSKFGISIHQIPLLLRIVENTNMTINGIHMHTGSDILDID 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230 F + I E +++I G G K ++ + L E K + Sbjct: 192 VFLYASE-ILFETAKNFKNLDFIDFGSGFKVPYKVDDIETNIEELGEKLSKRFNEFCKDY 250 Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280 EPG+ +V+ V + + VDS + L E Sbjct: 251 GKELTLAFEPGKFLVSEAGVFLVKVNVVKQTTSTVFAQVDSGFNHLIRPMLYGSQHEILN 310 Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I G V G C D F + GD + F++ Y + + +N Sbjct: 311 ISNPKGRERFYSVVGYICET-DTFANNRRISEINQGDILCFKNAGAYCYSMASNYNSRYR 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + D + +++D +N Sbjct: 370 PAEVLIHKDKAHLIRKRETFDDIISN 395 >gi|296188475|ref|ZP_06856863.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7] gi|296046739|gb|EFG86185.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7] Length = 433 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 68/400 (17%), Positives = 129/400 (32%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + + + G++ ++ A K F + + + S Sbjct: 30 GTPLYVVDEDLVRSTCREFKDNFEIEGIESEVIYASKAFLNLAIAKVICEEGLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F + K A+ + I+ + ++L + + L+K Sbjct: 90 GELYTALKANFPVSRIYMHGNNKTEGELSMAIEAGIGRIVVDNRNELEVIEYLCKSLNKK 149 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + LR+NP + ++ S+ GE D SE N G H Sbjct: 150 VDVLLRVNPGIEAHTHEYIQTSKNDSKFGESIFDEDMCKIINRFQNSESVNFKGFHCHIG 209 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-CQRLKEF 221 + + S M+K +EK E ++LGGG + LK Sbjct: 210 SQIFEEKSFYSEVSDMIKFLEKIKNQCGFSTEELNLGGGFGVYYSEGDKPVNLKSCLKNM 269 Query: 222 SEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSV 265 ++ +EPG +I+ N T V + + + Sbjct: 270 LSILKEESQKSGLNIKKVMIEPGRSIIANAGTTLYNVGGTKKTYGGKQYIFIDGGMADNP 329 Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + D A + + G+ C +GDI + V+ GD ++ Sbjct: 330 RTALYDAKYEAVVANKVNSENSEIYTIAGKCCESGDIIIKEIELPEVERGDIMAVLTTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P + A++ +Y D N Sbjct: 390 YNYSMSSNYNRIPKPAVVFVKEGEAKIAVKRETYEDIIRN 429 >gi|310780443|ref|YP_003968775.1| diaminopimelate decarboxylase [Ilyobacter polytropus DSM 2926] gi|309749766|gb|ADO84427.1| diaminopimelate decarboxylase [Ilyobacter polytropus DSM 2926] Length = 433 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 79/400 (19%), Positives = 144/400 (36%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P Y++D+ + N++T K +++ A K F GM ++++ S Sbjct: 29 GSPLYVMDEALISKNMETFKAAFKSDRFQTEVVYASKAFLTTGMCQIVDRHGLSMDVVSG 88 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F E + K E + II + +L+K + ++ Sbjct: 89 GELFTVKSAGFPMEKVHMHGNNKTWEELEMCLDYGIGEIIVDNRDELDKLERVCREKGKK 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + LR+NP + + S+ GE D I +E + G H Sbjct: 149 INVLLRVNPGIEAHTHEYIQTSTYSSKFGESIFDENIKDIIKKFIAAEHVELKGFHCHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP--------VKDF 214 + F MLK I++ ++LGGG D K+ Sbjct: 209 SQIFDEKPFFAAMDTMLKFIKQMKDEAGLDTTVLNLGGGFGVYYFDGDDAVDFEKFCKEM 268 Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 + L+ ++Y + + +EPG +IV N T TV ++ + K V VD + ++ Sbjct: 269 IKDLESKLDEYEIDLDKVIIEPGRSIVANAGTTLYTVGGTKVTYSGKKYVFVDGGMTDNI 328 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + V G+ C +GD+ + + K GD ++ Sbjct: 329 RPALYQAEYEGVIANRINEKTEDLVTVAGKCCESGDLLLRDVYLQEAKEGDILAISTTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P + + A++ SY D N Sbjct: 389 YNYSMASNYNRIRKPAVVFVKDGESKVAVKRESYEDLIRN 428 >gi|160901955|ref|YP_001567536.1| diaminopimelate decarboxylase [Petrotoga mobilis SJ95] gi|160359599|gb|ABX31213.1| diaminopimelate decarboxylase [Petrotoga mobilis SJ95] Length = 430 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 69/399 (17%), Positives = 127/399 (31%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP ++D+ ++ N+ + ++ A K F + L S Sbjct: 24 GTPLLVLDEAQIRENIKRLKSAFESADYTNYEIAYASKAFLNTELCRILQSENVSLDVVS 83 Query: 60 LYEVMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ + H F +N + + A+ ++ II + + + +++L K Sbjct: 84 GGELYIAFHSSFPANKIFFNGNSKTNEELVMALENDVGHIIVDNEDEFRNIERISKRLRK 143 Query: 117 K--IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC 167 K I R+ P+++ + S+ G D SE + G+ H Sbjct: 144 KAKIYFRVIPNITPDTHKYISTGQKDSKFGMSFDDMLKLIKSIKNSENLEIKGIHAHIGS 203 Query: 168 ENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR------ 217 + + + K + I +GGG + Q Sbjct: 204 QINEAEPYVELVKTFFDLLNKIREETGAVLPEIDIGGGFGVAHSTFEKAIDIQEAIKGVI 263 Query: 218 -----LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPD 271 L S +I +EPG I+++ T TV I +V D + ++ Sbjct: 264 QEVRFLSSKFHYPSPKIIVEPGRYIISSAGTTLYTVGTIKRTENKKYVVVDGGMADNIRP 323 Query: 272 YLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + N + GR+C +GDI E +K GD ++ Y Sbjct: 324 ALYGAKYEVFIANRPKDTINLEKVTIAGRACESGDILIEETCLPEIKPGDLLAIPSTGDY 383 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + N +NG P I + R Y+D Sbjct: 384 TNSMSNNYNGFLKPAIVLVKNGKHKLITRREVYDDLIKR 422 >gi|319404864|emb|CBI78465.1| Diaminopimelate decarboxylase [Bartonella rochalimae ATCC BAA-1498] Length = 424 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 64/388 (16%), Positives = 119/388 (30%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y + L+ N + ++ + A+K + + L + G S Sbjct: 25 VGTPFYCYSARTLITNFENYQQAFQDMPYLIAYAVKANSNQAILRLLARSGAGADVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ Y+ K + A+ N + +L + +A L Sbjct: 85 ELRRALAAGIPAHRIVYSGVGKTMKEIDFALTQNIHCFNVESEPELEQLSARAVALSTTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 LRINP V + ++ G E K + G+ H + Sbjct: 145 RISLRINPDVDAKTHKKITTGKSENKFGIPLSSAREVYKKAAQLPGLYICGVDIHIGSQI 204 Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221 K F + + + + I + +GGG+ ++ +++ Sbjct: 205 CNLKPFEDAFLITADFICQLWNDGYTITHVDIGGGLGIPYGSEHHSVPSPFEYAALVRKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + I LEPG +IV L T+V+ + +N VIVD+++ + L Sbjct: 265 IAPLGINIILEPGRSIVGEAGILVTSVIHLKRGKERNFVIVDAAMNDFIRPTLYEAWQNV 324 Query: 281 IYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P A + G C GD G + GD + Y N +N Sbjct: 325 LLVKEKPIDTPLINADIVGPVCETGDYLGLNRSLALLSQGDLLVVTGAGAYGAVMSNTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + Y Sbjct: 385 SRLLIPEVLVQDMRYAVIRPRLDYEQLI 412 >gi|312876367|ref|ZP_07736352.1| diaminopimelate decarboxylase [Caldicellulosiruptor lactoaceticus 6A] gi|311796861|gb|EFR13205.1| diaminopimelate decarboxylase [Caldicellulosiruptor lactoaceticus 6A] Length = 433 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 60/402 (14%), Positives = 124/402 (30%), Gaps = 37/402 (9%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 M TP Y++++ + N++ + ++ A K F M + G Sbjct: 28 MYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCTKAMCQIAKEEGIGLDV 87 Query: 58 SSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E+ F + ++ K + + + I+ + +L + + Sbjct: 88 VSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVEKGVKIVLDNFDELEMLSLICKTKN 147 Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164 K + +RI P + + S+ G ++ ++ + ++ GL H Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMVQKVLQRQELSLVGLHCH 207 Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 + F ML+ + K Q++ + LGGG + ++ E Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKIKNELGWQVDILDLGGGFGIKYTAHDEPPKIEKFIE 267 Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263 + I LEPG +IV T+ I E + Sbjct: 268 AIAEEVEEFCSLRGLKKPFIVLEPGRSIVGEAGITLYTIGSIKEIPNVRNYASVDGGMTD 327 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + + + GR C +GDI + +K G ++ Sbjct: 328 NPRYALYQARYDAYVVENPLGQRTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N P + + ++ +Y D N Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQARVIVKRETYGDLVRN 429 >gi|307250800|ref|ZP_07532729.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857159|gb|EFM89286.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 416 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 116/386 (30%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDKAFGSHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ ++++L++ + A +L K Sbjct: 86 LERVLAAGGKPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + ++ ++ + LGGG+ + K EK Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG AI N L T V + +N IVD+ + + L Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325 Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ ++ GD I+ Y + +N Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D S+ D + Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410 >gi|217969261|ref|YP_002354495.1| diaminopimelate decarboxylase [Thauera sp. MZ1T] gi|217506588|gb|ACK53599.1| diaminopimelate decarboxylase [Thauera sp. MZ1T] Length = 423 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 119/385 (30%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + A+K + G+ + G S E Sbjct: 35 GTPTYVYSRAALAAAFAAWQDALAGRRALVCYAVKANSNLGILSVFARLGAGFDIVSGGE 94 Query: 63 VMLGHEKFG-GETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G + ++ K A+L+ + ++L A +L Sbjct: 95 LARVLAAGGRADKVVFSGVGKTRAEMRQALLAGIRCFNVESAAELEHLDAVAGELGVRAP 154 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G D + ++ G+ H + Sbjct: 155 VSLRVNPDVDPKTHPYISTGLKGNKFGVAFADAPAIYRRAAALPNLHITGVACHIGSQLL 214 Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + L+++ + +E I LGGG+ +D + L E + Sbjct: 215 DRAPIAEAAQKLRDLVEHLAADGMALEHIDLGGGLGIRYRDETPPPVAEYLAPLLEVFAG 274 Query: 226 -SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY- 282 + ++ EPG ++V N L T + + KN IVD+++ L + Sbjct: 275 RAEELCFEPGRSLVGNAGLLLTRIEYLKPGETKNFAIVDAAMNDLARPALYDAWHEVVEV 334 Query: 283 --PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P T V G C +GD V GD ++ Y + + +N Sbjct: 335 AARTHAPSTYDVVGPICESGDFLARERSLA-VAEGDLLAILSAGAYGMTMASNYNTRPRA 393 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + + + Sbjct: 394 AEILVDGASAHVVRERETVEELFAR 418 >gi|299538364|ref|ZP_07051647.1| diaminopimelate decarboxylase [Lysinibacillus fusiformis ZC1] gi|298725951|gb|EFI66543.1| diaminopimelate decarboxylase [Lysinibacillus fusiformis ZC1] Length = 439 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 125/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + + + K GVK + A K FA ++ + S Sbjct: 30 GTPLFVYDTALIRKRARSFIDTFKKLGVKAEVAYASKAFACVAVYQLAAEENLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K S I+ + ++ KD +++ +K Sbjct: 90 GELFTALKAGFPAERIHFHGNNKSIAEIELAFDSKIGCIVVDNFYEIQLLKDISERRQQK 149 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKN----VNGLMFHNN 166 + LR+ P V + S+ G + + + + GL H Sbjct: 150 MRILLRVTPGVEAHTHDFITTGQADSKFGFDLNNGQADEAFQQTFNHEFLELLGLHCHIG 209 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----------KDYPV 211 + F ++ I ++LGGG + Sbjct: 210 SQIFDTAGFGLAGEKLIDKISDWNKTHGFTCTVLNLGGGFGIRYTEEDAPLEPQVYVEDM 269 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 + +I++EPG ++V + T T+ +++ + VD + ++ Sbjct: 270 ITVVKNKATVLGLKMPEIWIEPGRSLVGDAGTSLYTIGSQKTVPDVRKYIAVDGGMSDNI 329 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + V G+ C +GD + GD ++ Sbjct: 330 RPALYDAKYEAVIASKANEPKDELYTVAGKLCESGDKLIIDAKLQDAASGDVLAIFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + P + AIR SY D N Sbjct: 390 YGYSMASNYNRVPRPAVVFVEDGQHQLAIRRESYEDIVQN 429 >gi|307636984|gb|ADN79434.1| diaminopimelate decarboxylase [Helicobacter pylori 908] gi|325995576|gb|ADZ50981.1| Diaminopimelate decarboxylase [Helicobacter pylori 2018] gi|325997172|gb|ADZ49380.1| Diaminopimelate decarboxylase [Helicobacter pylori 2017] Length = 405 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 122/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ + + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFRGRKSLICYALKANSNLSILSLLANLGSGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IQRALKAGIKPYKIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDAGGGIGVSYENEETIKLYDYAQGILNSLQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD+++ E V Y + + +N Sbjct: 312 TPCRGREISPCDVVGPVCESSDTFLKDANLPELEPGDKLAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|52080853|ref|YP_079644.1| diaminopimelate decarboxylase [Bacillus licheniformis ATCC 14580] gi|52786225|ref|YP_092054.1| hypothetical protein BLi02486 [Bacillus licheniformis ATCC 14580] gi|319645190|ref|ZP_07999423.1| diaminopimelate decarboxylase [Bacillus sp. BT1B_CT2] gi|52004064|gb|AAU24006.1| diaminopimelate decarboxylase [Bacillus licheniformis ATCC 14580] gi|52348727|gb|AAU41361.1| LysA [Bacillus licheniformis ATCC 14580] gi|317392999|gb|EFV73793.1| diaminopimelate decarboxylase [Bacillus sp. BT1B_CT2] Length = 439 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 68/399 (17%), Positives = 127/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + K AG ++ A K F++ M Q S Sbjct: 30 GTPLYVYDVALIRERARKFQKAFKEAGLKAQVAYASKAFSSVAMIQLAEQEGLSLDVVSG 89 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F E ++ K E A+ I+ + ++ +D ++ Sbjct: 90 GELFTAIKAGFPAERIHFHGNNKSPEELAMALEHQIGCIVLDNFHEIAITEDLCKRSGQT 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G + + + S + G+ H Sbjct: 150 VDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQVEQAIEQVLRSSAFKLLGVHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFC------- 215 + F I ++ + E ++LGGG Sbjct: 210 SQIFDTAGFVLAADKIFEKLAEWRETYSFIPEVLNLGGGFGIRYTKDDEPLAADVYVEKI 269 Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + +K +E + I ++EPG ++V + T T+ E +D + ++ Sbjct: 270 IEAVKANAEHFGFDIPEIWIEPGRSLVGDAGTTLYTIGSQKEVPGIRKYVAIDGGMSDNI 329 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + TA + G+ C +GD+ V+ GD ++ Sbjct: 330 RPALYEAKYEAAVANRMNDACHDTASIAGKCCESGDMLIWDLEIPEVRDGDVLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + I+ +Y D Sbjct: 390 YGYSMANNYNRIPRPAVVFVEDGEAQLVIQRETYEDIVK 428 >gi|322381769|ref|ZP_08055723.1| diaminopimelate decarboxylase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154157|gb|EFX46479.1| diaminopimelate decarboxylase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 445 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 67/400 (16%), Positives = 123/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + + +++G ++ A K F M + S Sbjct: 30 GTPLYVVDETLVRQRCQEFVSAFRDSGLKFQVAYASKAFCVKAMCRVAVEEGMSLDVVSD 89 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+M E F E ++ K + + + + + ++ A Q L Sbjct: 90 GELMTALESGFPPERIHFHGNNKTPQEIEMALRAGIGCFVVDNFVEMQLLHSMAAEQGLR 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G + + E ++ G+ H Sbjct: 150 VNVLLRITPGVEAHTHEYISTGQTDSKFGFDLENGSAFQAVQEASRLESFHLLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFC------- 215 + F ++ + + I+LGGG Sbjct: 210 SQIFEVEGFQIAVEKVAAFAVQVRDEMGISFQVINLGGGFGIRYTAEDTPLPVSQYVQAI 269 Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 +K Y I ++EPG +IV + T TV I + V + + Sbjct: 270 TNSIKTCFASYKYPIPEIWVEPGRSIVGDAGTTLYTVGTIKDIPGVRKYVSVDGGMTDNP 329 Query: 270 PDYLLYQESATIYPNTGPYTA----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L I N A V G+ C +GD+ V+ GD ++ Sbjct: 330 RPALYQSVYEAILANRAKEEAAEVISVAGKCCESGDMLIWDVKLPKVQTGDILAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P + ++ S+ N Sbjct: 390 YNYSMASNYNRIRRPAVVFVQNGQADIVVKRESFEYLLGN 429 >gi|169827284|ref|YP_001697442.1| diaminopimelate decarboxylase [Lysinibacillus sphaericus C3-41] gi|168991772|gb|ACA39312.1| Diaminopimelate decarboxylase [Lysinibacillus sphaericus C3-41] Length = 449 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 125/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + + + K GVK + A K FA ++ + S Sbjct: 40 GTPLFVYDTALIRKRARSFIDTFKKLGVKAEVAYASKAFACVAVYQLAAEENLSLDVVSG 99 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K S I+ + ++ K+ +++ +K Sbjct: 100 GELFTAIKAGFPAERIHFHGNNKSIAELELAFDSKIGCIVVDNFYEIQLLKEISERRQQK 159 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKN----VNGLMFHNN 166 + LR+ P V + S+ G + + + + GL H Sbjct: 160 MRILLRVTPGVEAHTHDFITTGQADSKFGFDLNNGQADEAFQQTFNHEFLELLGLHCHIG 219 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----------KDYPV 211 + F ++ I ++LGGG + Sbjct: 220 SQIFDTAGFGLAGEKLIDKISDWNKAHGFTCTVLNLGGGFGIRYTEEDAPLEPQVYVEDM 279 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 + +I++EPG ++V + T T+ +++ + VD + ++ Sbjct: 280 ITVVKNKATVLGLKMPEIWIEPGRSLVGDAGTSLYTIGSQKTVPDVRKYIAVDGGMSDNI 339 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I + V G+ C +GD + GD ++ Sbjct: 340 RPALYDAKYEAIIASKANEPKNEIYTVAGKLCESGDKLIIDAKLQDAASGDVLAIFCTGA 399 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + P + AIR SY D N Sbjct: 400 YGYSMASNYNRVPRPAVVFVENGQHQLAIRRESYEDIVQN 439 >gi|326803676|ref|YP_004321494.1| diaminopimelate decarboxylase [Aerococcus urinae ACS-120-V-Col10a] gi|326650651|gb|AEA00834.1| diaminopimelate decarboxylase [Aerococcus urinae ACS-120-V-Col10a] Length = 438 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 72/401 (17%), Positives = 137/401 (34%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + + T + K ++ A K F + +N+ + S Sbjct: 29 GTPLYIYDQKGIKDQAKTFINGFHSKKFTTHIIYASKAFLNLYIAQLINEQGCYLDAVSG 88 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ L GE ++ K A+ T + ++ + K + + L+K+ Sbjct: 89 GEIYTLLAAGVPGEKIYFHGNNKTESEIILALEQGIGTFVIDSQTDFYKVEKIVKSLNKQ 148 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 + LRINP + S +R S+ G K+ ++S+ + G H Sbjct: 149 AKVLLRINPGIEASTHKYIQTSRDDSKFGMSSHDEDTVALVKEMVKSDWFDFAGFHCHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ML + Q+ I+LGGG Sbjct: 209 SQILEERFFFEEADLMLGFCRQMEEETGCQVREINLGGGFGVYYSQADRPFDYEKFLQSY 268 Query: 215 ----CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN--IKNLVIVDSSVEAH 268 + ++ ++ + +EPG A++ + T +V + K V VD + + Sbjct: 269 IQVIEAAINQYGLEHIDTVSIEPGRALINDFGTALYSVGGVKHTLAGKPFVFVDGGMSDN 328 Query: 269 VPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + A + V G+ C GD + +IGD + V Sbjct: 329 IRPALYQAKYEAALANRMNDEVEGEYRVAGKLCETGDQLVQDAPLPEARIGDLLVIPRVG 388 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +N + P + + A++ SY D N Sbjct: 389 AYTYTMSSNYNRLGRPALVFVEDGQSYLAVKRESYQDLLRN 429 >gi|91762456|ref|ZP_01264421.1| Diaminopimelate decarboxylase [Candidatus Pelagibacter ubique HTCC1002] gi|91718258|gb|EAS84908.1| Diaminopimelate decarboxylase [Candidatus Pelagibacter ubique HTCC1002] Length = 404 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 68/382 (17%), Positives = 132/382 (34%), Gaps = 21/382 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y ++L N+ + + A+K + + + G S+ E Sbjct: 23 GTPTYCYSHKRLTENIKKFKKNFSSFSPLICFAVKSNTNVNLIREIRKLGLGADVVSMGE 82 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 +M+ + ++ K + + + I + S++ + + A+ K Sbjct: 83 LMMAIKAGIDPKKIVFSGVGKTSKEISYAIDKKILLINAESKSEIIEIEKIAKSKKKIVN 142 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 IG+R+NP+ + ++ G K S+ N+ L H + Sbjct: 143 IGIRLNPNTDAKTLKQISTGKKENKFGVDEKTFFELVNFTNHSKNINLKCLSVHIGSQIL 202 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYS 226 + ML + K E+I LGGG+ + + + + +++F + Sbjct: 203 DHKPYEKMLNVVNKIIKKSGHIFEFIDLGGGMGISYEKNSKKLNYQKYNIAIQKFLKGQK 262 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT 285 +I EPG +IV N L + V+ I EN K I+ D+++ + L TI Sbjct: 263 TKIIFEPGRSIVGNIGFLISQVIYIKENTKKDFIILDAAMNDLMRPALYGANHQTIPVVK 322 Query: 286 GP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T G C + D F + +K D + DV Y ++ + +N P Sbjct: 323 NNRISNKTYEFVGPICESTDKFTTIKGFQKLKEKDLVIMCDVGAYGMSLSSNYNVRPKPA 382 Query: 342 IAVKNVDGTIKAIREFSYNDYY 363 + + D Sbjct: 383 ELIIKGSKINIIKKRQKLKDLI 404 >gi|17986368|ref|NP_539002.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|17981958|gb|AAL51266.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. 16M] Length = 421 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + + ALK + + L + G + S Sbjct: 25 VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K A+ + + +L + A Sbjct: 85 EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G + + NV G+ H + Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + KE I + +GGG+ + + Q + + Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTPNTPPPPPVAYAQIVAKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + ++ EPG IV N L T V+ + E + KN VIVD+++ + L Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A G C GD G GD I+ Y + +N Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y + Sbjct: 385 SRLLIPEVLGDGERYHVVRPRRTYEELLA 413 >gi|238025969|ref|YP_002910200.1| Diaminopimelate decarboxylase [Burkholderia glumae BGR1] gi|237875163|gb|ACR27496.1| Diaminopimelate decarboxylase [Burkholderia glumae BGR1] Length = 423 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 115/389 (29%), Gaps = 27/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + L +A+K + G+ + + G S E Sbjct: 28 DTPLYVYSRAALTAAYQAYAKACEGRRASLHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGHEKFGGETHAYNVAY---KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G H D A+ + +V +L++ A L Sbjct: 88 LARVLAAGGKAEHVVFSGVAKSADEMRLALEAGVKCFNVESVPELDRLNAVAGSLGKRAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGVAFADARATYRAADALPNLQVAGIDCHIGSQIT 207 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + L ++ ++ I + +GGG+ T D D ++ K Sbjct: 208 ELSPYLDALDKVLDLVEQIEADGIAIHHVDVGGGLGITYADETPPDIGAFVQALFAKLDA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 ++ EPG ++ N L T V + KN IVD+ + + A Sbjct: 268 RGHGHRELCFEPGRSLTGNAGILLTRVEFLKPGEEKNFAIVDAGMNDLARPAMYEAYHAI 327 Query: 281 IYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + V G C +GD G + GD ++ Y + +N Sbjct: 328 VPVRQTSAHASAVYDVVGPVCESGDWLGRERTLA-IAAGDLLAIRSAGAYGFAMSSNYNT 386 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + + Y N Sbjct: 387 RPRAAEVLVDGQNAYLVRQRETIASLYEN 415 >gi|256420454|ref|YP_003121107.1| diaminopimelate decarboxylase [Chitinophaga pinensis DSM 2588] gi|256035362|gb|ACU58906.1| diaminopimelate decarboxylase [Chitinophaga pinensis DSM 2588] Length = 406 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 117/385 (30%), Gaps = 25/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ +K+ + + + A K + +N G + S+ E Sbjct: 21 GTPVYIYHAEKIKIQYEKLQTAFQKTDARFFYACKALTNINILKYINSLGCGLDTVSIQE 80 Query: 63 VMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V LG F + D EI A I + +S L +F ++ I + Sbjct: 81 VHLGLKAGFAPNNIIFTPNCVDLDEIIAAKELGVNINIDNISILEQFGNR-FGDSYPICI 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSFLC 174 R+NP + S+ G S V GL H E K Sbjct: 140 RLNPHIMAGGNYKISTGHVDSKFGISIHQLRHIERIVKSTKLKVTGLHMHTGSEIKDVDV 199 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224 F ++ + ++ +E+I LG G + + L + Sbjct: 200 FLRGVEIMFEQ-AVHFPDLEFIDLGSGFKVAYQAGDPETDINLLGRKLSEAFNKFAATYK 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283 +Q++ EPG+ +V+ + I + + + V+S + Sbjct: 259 RPLQVWFEPGKFLVSQSGYFVVKANVIKQTTATVFVGVNSGFNHLIRPMFYDAFHLIKNI 318 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + T + G C D FG VK GD + F + Y + FN P Sbjct: 319 SNPKGTERIYTIVGNICET-DTFGWDRKLNEVKEGDFLVFYNAGAYGFEMSSNFNSRLKP 377 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D N Sbjct: 378 AEVLVKDGKAQLIRKRDTLEDLLRN 402 >gi|126661847|ref|ZP_01732846.1| diaminopimelate decarboxylase [Flavobacteria bacterium BAL38] gi|126625226|gb|EAZ95915.1| diaminopimelate decarboxylase [Flavobacteria bacterium BAL38] Length = 401 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 65/386 (16%), Positives = 117/386 (30%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D +K+ + K K+ A+K + + + L G + S+ Sbjct: 14 GSPLYVYDAEKIAFQYNRLQNAFKKVERFKVHYAVKALSNISVLNYLKSLGSGLDTVSIQ 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV+LG F Y E ++N I + +S L +F K + + Sbjct: 74 EVLLGLHAGFDPRDIIYTPNGVSMEEIETVANFGVQINIDNLSILEQFGTK--HPNVPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173 +RINP V S+ G ++NG+ H + Sbjct: 132 IRINPHVMAGGNANISVGHIDSKFGISIHQLPHILRIIENTKMHINGIHMHTGSDILDVE 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229 F + I E +++I G G K ++ + K + Sbjct: 192 VFLYAAE-ILFETAKNFKDLDFIDFGSGFKVPYKKDDIETNVEEFGTKLTKRFLAFEKEY 250 Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESA--T 280 EPG+ +V+ V + + +DS + L + Sbjct: 251 GRPLTLAFEPGKFLVSEAGYFLAKVNVVKQTTSTVFAGIDSGFNHLIRPMLYGSQHHIEN 310 Query: 281 IYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I G V G C D F + GD + F + Y + + +N Sbjct: 311 ISNPKGKERYYSVVGYICET-DTFASNRRISEIHEGDILCFRNAGAYCFSMASNYNSRLK 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + +++D N Sbjct: 370 PAEVLWKDGKGHLIRERETFDDILKN 395 >gi|119899943|ref|YP_935156.1| LysA2 protein [Azoarcus sp. BH72] gi|119672356|emb|CAL96270.1| LysA2 protein [Azoarcus sp. BH72] Length = 424 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 111/380 (29%), Gaps = 23/380 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + A+K A G+ Q G S E Sbjct: 36 GTPTYVYSRAALTAAFRDWQAALAGRRSLVCYAVKANANLGVLSVFAQLGAGFDIVSGGE 95 Query: 63 -VMLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + ++ K A+ + + +L + + A +L + Sbjct: 96 LARVIAAGGRADRVVFSGVGKSRAEMRQALAAGIRCFNVESAPELERLNEVAGELGQRAP 155 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + +E ++G+ H + Sbjct: 156 IALRVNPDVDPKTHPYISTGLKSNKFGVAFGEALELYRRAATLPHLRISGIACHIGSQLL 215 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 + + + ++ I LGGG+ +D + L Sbjct: 216 DPAPVAEAAAKVLGLVDQLSAEGIVLDHIDLGGGLGIRYRDETPPSVAAYLAPLLAAFGD 275 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +I EPG ++V N L T V + KN IVD+++ L + Sbjct: 276 RREEICFEPGRSLVGNAGLLLTRVEYLKHGEEKNFAIVDAAMNDLARPALYDAYHEAVAV 335 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C +GD ++ GD ++ Y + + +N Sbjct: 336 CRSDAPRQRYEIVGPICESGDFLAHDRELA-LRDGDLVALLSAGAYGMTMSSNYNTRPRA 394 Query: 341 TIAVKNVDGTIKAIREFSYN 360 + + + Sbjct: 395 AEVMVDGGQVHLVRERETVE 414 >gi|308182206|ref|YP_003926333.1| carboxynorspermidine decarboxylase [Helicobacter pylori PeCan4] gi|308064391|gb|ADO06283.1| carboxynorspermidine decarboxylase [Helicobacter pylori PeCan4] Length = 406 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 139/401 (34%), Positives = 210/401 (52%), Gaps = 39/401 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKILLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S ++ +P SRLG + + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSEFEKGAKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++EK F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSVQI--YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 E+Y I LEPGEAI L +V+DI +N + + I+D+S AH+PD L + Sbjct: 246 ERYHNNIEVILEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPS 305 Query: 281 IYP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 I N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 ILKVSVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQDML 365 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 HYTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 405 >gi|150019596|ref|YP_001311850.1| diaminopimelate decarboxylase [Clostridium beijerinckii NCIMB 8052] gi|149906061|gb|ABR36894.1| diaminopimelate decarboxylase [Clostridium beijerinckii NCIMB 8052] Length = 431 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 70/400 (17%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P Y+ D+ + K ++ A K F M L + S Sbjct: 29 GSPLYVFDEDLIREYCRDYRKYFKCEENNNRVAFAGKAFLTLQMCKLLKEENMCLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ +F E ++ K V + + +++ D A Sbjct: 89 GELYTAYKSEFPLEKVMFHGNNKTLSEIELGVRLGVGNFVVDNYYEIDALNDIAKEYNKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + I LRI P + + S+ G + K I E N+ G+ H Sbjct: 149 QNIYLRITPGIEAHTHDYIKTGQIDSKFGFAPVGTVIEDAIKKAISLENINLAGIHCHIG 208 Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + ML+ + + I + GGG + + Sbjct: 209 SQIFDLEPYEDAVEIMLELVRNTKENLGYLINEVDFGGGFGIYYTEGDEPRSTEEYCSTI 268 Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 ++ +EPG +IV N T TV + E V + ++ Sbjct: 269 INKVDEVCARTGQERPILTIEPGRSIVANAGTTLYTVGSVKEIPSVRKYVSVDGGMTDNI 328 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E I T + G+ C +GDI E VK GD ++ Sbjct: 329 RPALYNAEYECILASGVEGDREETVTISGKCCESGDILLENIKIPEVKSGDILAIMTTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N I P + + + T + SY+D N Sbjct: 389 YGYSMSSNYNRIPKPAVVMVKDNETRLICKRESYDDLLKN 428 >gi|291612946|ref|YP_003523103.1| diaminopimelate decarboxylase [Sideroxydans lithotrophicus ES-1] gi|291583058|gb|ADE10716.1| diaminopimelate decarboxylase [Sideroxydans lithotrophicus ES-1] Length = 433 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 63/402 (15%), Positives = 119/402 (29%), Gaps = 41/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L ++ K+ + A+K + + + + G S E Sbjct: 27 GTPCYVYSRAALTDSYRQFAEALKSRDHLICYAVKANSNLAILNLFARLGAGFDIVSGGE 86 Query: 63 VMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKA--QKLHKK 117 + G + V + E+ L + +L++ A Sbjct: 87 LQRVLAAGGAASKVVFSGVGKSEAEMRQALEAEILCFNVESAPELDRLNALAGSMGKVAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G + +E K V G+ H + Sbjct: 147 VSLRVNPDVDAKTHPYISTGLKQNKFGVAYTEALELYRKAAAMPNLRVTGMDCHIGSQLT 206 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224 F A + + + +E + LGGG+ D + K + Sbjct: 207 ETSPFIAAAEKVLALVDKLAAAGITLEHLDLGGGLGIRYDDETPPSIAEYGKALLAVLQG 266 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 S ++ +EPG +V N L T + + KN IVD+++ + L A + Sbjct: 267 RSEKLIVEPGRVLVGNAGVLLTRIEYLKHGEEKNFAIVDAAMNDLMRPALYDAWHAILPV 326 Query: 284 N---------------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 + V G C GD G V GD ++ Sbjct: 327 QRRQNAPLSNSLPQAGERTSEKSNSQIYEVVGPICETGDFIGHAREMA-VDKGDALAVMS 385 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y ++ + +N + + + Y Sbjct: 386 AGAYGMSMSSNYNTRPRAAEVMVDGAVVHLVRERETVRQLYA 427 >gi|86132344|ref|ZP_01050939.1| Diaminopimelate decarboxylase [Dokdonia donghaensis MED134] gi|85817263|gb|EAQ38446.1| Diaminopimelate decarboxylase [Dokdonia donghaensis MED134] Length = 401 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 118/386 (30%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D + + K+ ++L A+K + + L G + S+ Sbjct: 14 GSPVYVYDADTITAQYNRLTNAFKSVKQLRLNYAVKALSNLSILQHLKGLGSGLDTVSIQ 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG F + + ++ I + +S L +F K + Sbjct: 74 EVQLGLKAGFTPDRIIFTPNGVSLGEIEEVAAMGVQINIDNLSILEQFGTK--HPETPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173 +RINP V S+ G N+NG+ H + Sbjct: 132 IRINPHVMAGGNTNISVGHIDSKFGISIHQLPHVLRIVENTGMNINGIHMHTGSDILDID 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230 F + I E + + +I G G K+ ++ + L E K Sbjct: 192 VFVYATE-ILFETAKQFSDLTFIDFGSGFKVPYKEGDIETNIEELGEKLGKRFNAFAKAY 250 Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280 EPG+ +V+ + V + + VDS + L E Sbjct: 251 KKPLTLTFEPGKFLVSESGKFLVQVNVVKQTTSTVFAQVDSGFNHLIRPMLYGSQHEINN 310 Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I G V G C D F + GD ++F++ Y + +N Sbjct: 311 ISNPNGRERFYSVVGYICET-DTFANNRRIAEISEGDILAFDNAGAYCFTMASNYNSRYR 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + +++D N Sbjct: 370 PAEVLIKGGKAHLIRKRETFDDLIAN 395 >gi|110639661|ref|YP_679871.1| diaminopimelate decarboxylase [Cytophaga hutchinsonii ATCC 33406] gi|110282342|gb|ABG60528.1| diaminopimelate decarboxylase [Cytophaga hutchinsonii ATCC 33406] Length = 410 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 62/385 (16%), Positives = 118/385 (30%), Gaps = 25/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + +K+L+ V++ A K + L G S+ E Sbjct: 23 GTPLYVYNSEKILSQYKRLHDAFSGVNVRIKYAAKALTNQAILKLLKGAGAGVDVVSIQE 82 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + L F + + D I + + L +F + Sbjct: 83 LQLALKAGFDKKDIMFTPNCVDFSEIEEAVGYGVQINIDNIPFLKQFGQV-YGSSVPCCV 141 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 RINP + + S+ G + ++ VNG+ H+ + KS Sbjct: 142 RINPHIDAGGNVKIMTGHKGSKFGISIEQVNEIYEVVDEYEILVNGVHVHSGSDFKSADA 201 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI----- 229 F + + ++ ++ G G + K+ + L + Sbjct: 202 FVRAAEVV-YSVAMQFDKLTFLDFGSGFKVSYKEGDYVTDIEELGKKMTDSFNAFCLNYG 260 Query: 230 -----YLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283 + EPG+ +V+ + L T I E I V+S + + + + Sbjct: 261 KKLDIWFEPGKFLVSESGMLLVTCTVIKETPACNFIGVNSGLNHLIRPMMYGSHHDIVNV 320 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + V G C D FG F + K GD I ++ Y + + +N P Sbjct: 321 SNPDGDKKMYTVVGYICET-DTFGSDLFIEETKAGDIIGLKNAGAYGFSMSSNYNSRFRP 379 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + + D N Sbjct: 380 AEVLVHKGKHQLIRKRETMEDLLKN 404 >gi|165976954|ref|YP_001652547.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303253397|ref|ZP_07339540.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246442|ref|ZP_07528515.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248567|ref|ZP_07530582.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307255425|ref|ZP_07537232.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259877|ref|ZP_07541591.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|165877055|gb|ABY70103.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302647742|gb|EFL77955.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306852646|gb|EFM84878.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854917|gb|EFM87105.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306861609|gb|EFM93596.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866047|gb|EFM97921.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 416 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ ++++L++ + A +L K Sbjct: 86 LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + ++ ++ + LGGG+ + K EK Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG AI N L T V + +N IVD+ + + L Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325 Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ ++ GD I+ Y + +N Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D S+ D + Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410 >gi|190150854|ref|YP_001969379.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264204|ref|ZP_07545795.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915985|gb|ACE62237.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870450|gb|EFN02203.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 416 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ ++++L++ + A +L K Sbjct: 86 LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKSLPNVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + ++ ++ + LGGG+ + K EK Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG AI N L T V + +N IVD+ + + L Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325 Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ ++ GD I+ Y + +N Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D S+ D + Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410 >gi|49476269|ref|YP_034310.1| diaminopimelate decarboxylase [Bartonella henselae str. Houston-1] gi|49239077|emb|CAF28380.1| Diaminopimelate decarboxylase [Bartonella henselae str. Houston-1] Length = 421 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 63/388 (16%), Positives = 117/388 (30%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y ++ N + + A+K + + L G S Sbjct: 25 VGTPFYCYSASAVVTNFKDYQNAFLDMPSLIAYAVKANSNQAVLRLLAANGAGADVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK----FKDKAQKLHK 116 E+ Y+ K + D FN S+ A Sbjct: 85 ELRRALAAGIPAHRIVYSGVGKTVKEIDFALAHDIYCFNVESEPELEQLSVCAVALSKTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 ++ LRINP V + ++ G K + V G+ H + Sbjct: 145 RVSLRINPDVDARTHRKITTGKSENKFGIPLSLAWDVYKKAAQLPGIQVCGVDMHIGSQI 204 Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221 K F ++ + ++ + I +GGG+ + D+ +++ Sbjct: 205 CDLKPFEDAFLIVADFVRQLRSHGYALTHIDIGGGLGIDYGNEHHSVPSLSDYAALVRKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + I LEPG +IV + L T+VL + N +N VIVD+++ + L Sbjct: 265 IAPLGIHIILEPGRSIVGDAGVLVTSVLYLKRGNGRNFVIVDAAMNDLMRPTLYDAWQNV 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + A + G C GD + GD ++ + Y + +N Sbjct: 325 LLVEQASKDALLMKADIVGAVCETGDYLALDRRVPTLATGDLLAIMEAGAYGAVMASTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + Y Sbjct: 385 SRLLVPEVLVQDTRYAVIRPRLDYAQLI 412 >gi|108562717|ref|YP_627033.1| diaminopimelate decarboxylase [Helicobacter pylori HPAG1] gi|107836490|gb|ABF84359.1| diaminopimelate decarboxylase [Helicobacter pylori HPAG1] Length = 405 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLGSGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q++ + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQKILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K V+VD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + + GD+I+ E V Y + + +N Sbjct: 312 TPSKGREISPCDVVGPVCESSDTFLKDVHLPELDPGDKIAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|91785428|ref|YP_560634.1| diaminopimelate decarboxylase [Burkholderia xenovorans LB400] gi|91689382|gb|ABE32582.1| diaminopimelate decarboxylase [Burkholderia xenovorans LB400] Length = 420 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 56/386 (14%), Positives = 121/386 (31%), Gaps = 26/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + +A+K + + + + G S E Sbjct: 28 GTPLYVYSRAALTAAWNAYAGACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + E ++ + +A+ + ++ +L++ A Sbjct: 88 LARVLAAGGKAENTVFSGVGKNANEMREALAAGVKCFNVESIPELDRLNAVAAEMGKKAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 + LR+NP V ++ G +D + V G+ H + Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARATYQAAAGMANLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + ++ +I I +GGG+ T D + + ++ ++ Sbjct: 208 EAAPYLDAVDKVLELVEQIEQDGLKIRHIDVGGGLGITYDDETPPEIGEFVRTVLDRIEA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 ++Y EPG ++V N L T V + KN IVD+++ + Sbjct: 268 RGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEKNFAIVDAAMNDLARPAMYEAYHAI 327 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + + V G C +GD G V+ GD ++ Y + +N Sbjct: 328 DPVVKRDVPAHVYDVVGPVCESGDWLGRERLLA-VEPGDLLAIRSAGAYGFVMSSNYNTR 386 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYY 363 + + A + Sbjct: 387 PRAAEVMVDGTQVHVARAREEVRQLF 412 >gi|255020055|ref|ZP_05292127.1| Diaminopimelate decarboxylase [Acidithiobacillus caldus ATCC 51756] gi|254970482|gb|EET27972.1| Diaminopimelate decarboxylase [Acidithiobacillus caldus ATCC 51756] Length = 421 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 59/382 (15%), Positives = 116/382 (30%), Gaps = 24/382 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ + L + L A+K A + + L ++ G S E+ Sbjct: 33 TPTYVYSESYLRQRFHAFTHAL-GPQTTLCYAVKANANLSILNRLARWGAGFDIVSGGEL 91 Query: 64 MLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KI 118 ++ +D A+ + + + ++L + + A +L I Sbjct: 92 ARVLRAGGDPTRVVFSGVGKSRDEIRRALEAEIYCLNVESPAELARIEQVAAELGCRAPI 151 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENKS 171 +R+NP V S ++ G + S V G+ H + Sbjct: 152 AMRVNPDVEASTHPYIATGLRETKFGIPMAEAPLLYERAARSRHLEVLGVACHIGSQLLD 211 Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEKY 225 + + + + G ++ + LGGG+ D D+ L Sbjct: 212 LAPIAEAARRVVQLYEALGRQGIHLQHLDLGGGVGIRYHDEQAPTPADYAAILDAALGDL 271 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI--- 281 V+ +E G A+V N L T V N V D+++ + L Sbjct: 272 PVRRVVELGRALVGNAGALLTRVEYRKYNGNRAFCVVDAAMNDLLRPSLYGAWHEIWPLE 331 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMP 340 V G C +GD F + ++ G+ ++ Y + +N Sbjct: 332 RRAAAQAPMDVVGPVCESGDFFAKARPLPADLREGEVLAILGAGAYGFAMSSQYNSRPRA 391 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + R + + Sbjct: 392 AEILVHGTDARVIRRRETLGEL 413 >gi|332982022|ref|YP_004463463.1| diaminopimelate decarboxylase [Mahella australiensis 50-1 BON] gi|332699700|gb|AEE96641.1| diaminopimelate decarboxylase [Mahella australiensis 50-1 BON] Length = 429 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 127/398 (31%), Gaps = 36/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV-KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y++D ++ + + + G +L A K F M + Q G S Sbjct: 24 GTPLYVMDDTQIRDACRRYVSAIRQYGNGMVLYAGKAFTNIAMCKLIQQEGLGLDVVSGG 83 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ +F E + K E + + ++ ++ ++ + A+ K I Sbjct: 84 ELYTAMKAEFPPERIYMHGNNKSYEELRMAVEYGIERVVIDSFHEVELLEQLARNYDKNI 143 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNC 167 G+ R+ P + + S+ G +D + + GL H Sbjct: 144 GVSVRVKPGIDAHTHHYIKTGQQDSKFGFGIEDGQIYRIIEYILTQPHLELKGLHCHIGS 203 Query: 168 ENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------- 214 + ML+ + ++ I GGG + Sbjct: 204 QIFETDPYIETAQIMLELMWDINDTHGLNMDEIDFGGGFGIRYVEEDNPLAPEDYIDALT 263 Query: 215 --CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 + + + + +I +EPG +I V I V + + Sbjct: 264 DGIKAYCDNNARQYPRILIEPGRSIAGPAGITLYMVGAIKHIPDVRTYVSVDGGMADNPR 323 Query: 271 DYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + + + N T + G+ C +GD+ V+ GD ++ D Y Sbjct: 324 PALYQAKYSAMIANKADKPAECTVSIAGKCCESGDMLIWDIDLPKVEAGDILAVFDTGAY 383 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + +N + +P + + + SY+D + Sbjct: 384 NYSMASNYNRLPIPAVVLVKDGRAELMVSRQSYDDLIS 421 >gi|315169667|gb|EFU13684.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1342] Length = 436 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 35 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 95 GELFTALKGGMESAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 335 RPALYQAVYDGFLANRDGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431 >gi|254198509|ref|ZP_04904930.1| diaminopimelate decarboxylase [Burkholderia pseudomallei S13] gi|169655249|gb|EDS87942.1| diaminopimelate decarboxylase [Burkholderia pseudomallei S13] Length = 423 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 119/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L + + +A+K + G+ + + G S E Sbjct: 28 GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G ++ K D A+ + ++ +L++ A L Sbjct: 88 LARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + ++ + QI + +GGG+ T D D ++ + Sbjct: 208 ELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGITYDDETPPDIGAYVRAVLARIDA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I+ EPG ++ N L T V + + KN IVD+++ + A Sbjct: 268 RGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327 Query: 281 I----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + + G C +GD G + GD ++ Y + +N Sbjct: 328 VPVAPRTDVAAAVYDIVGPVCESGDWLGRERLLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFE 414 >gi|332521816|ref|ZP_08398267.1| diaminopimelate decarboxylase [Lacinutrix algicola 5H-3-7-4] gi|332042646|gb|EGI78847.1| diaminopimelate decarboxylase [Lacinutrix algicola 5H-3-7-4] Length = 408 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 115/386 (29%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++P Y+ D Q + N VK+ A+K + + + G + S+ Sbjct: 14 ESPVYVYDSQTITNQYKRLTSAFNKVKNVKINYAVKALSNISILKLMRSLGAGLDTVSIQ 73 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG F E + ++ I + +S L +F K + Sbjct: 74 EVQLGLAAGFKAEDIIFTPNGVSLLEIETVAKLGCQINIDNLSILEQFGTK--HPKIPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCENKSFL 173 +RINP V S+ G +NG+ H + Sbjct: 132 IRINPHVMAGGNTNISVGHIDSKFGISIHQIPHILRIVENTNMTINGIHMHTGSDILDID 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230 F + I E +E+I G G K ++ + + Sbjct: 192 VFLYASE-ILFETAKNFKNLEFIDFGSGFKVPYKTGDIETNIEEFGDKLSARFNTFCKNY 250 Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280 EPG+ +V+ V + + VDS + L E Sbjct: 251 GKALTLAFEPGKFLVSEAGQFLAKVNVVKQTTSTVFAQVDSGFNHLIRPMLYGSQHEIEN 310 Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I G V G C D F ++ D ++F++ Y + + +N Sbjct: 311 ISNPNGRERFYSVVGYICET-DTFANNRRIAEIRENDILAFKNAGAYCYSMASNYNSRYR 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + + +++D N Sbjct: 370 PAEVLWHNGEAHLIRKRETFDDILRN 395 >gi|228470071|ref|ZP_04054980.1| carboxynorspermidine decarboxylase [Porphyromonas uenonis 60-3] gi|228308209|gb|EEK17064.1| carboxynorspermidine decarboxylase [Porphyromonas uenonis 60-3] Length = 388 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 113/380 (29%), Positives = 194/380 (51%), Gaps = 16/380 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TPYYL+++ L NL+ + + AGV+++LA K +A W F +Y+ +T+SS + Sbjct: 9 ITTPYYLLEESLLRRNLELIRSVAERAGVEIILAFKAYALWRTFPIFKEYIHASTASSPW 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119 E LG+E+ G HAY AY + I + I N+ +Q +F + + G Sbjct: 69 EARLGYEEMGAPVHAYTPAYSEENIADFVRYSSHITLNSPTQWQRFGPASPYAAEHISYG 128 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLMFHNNCENKSFLCF 175 LR+N + S K + +P P +R G + + E + + G+ H CE Sbjct: 129 LRLNLAYSPVKTEIYNPALPGTRFGVSAETLQQMEQEGALIGLEGVHLHVLCE-GDDEQL 187 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPG 234 +L+ +E+ FG + +++W++LGGG T ++Y + L+ F E++S +I +EPG Sbjct: 188 ELVLERLEERFGFILDKVQWLNLGGGHLMTHREYDTEHLVVLLRAFRERHSNLRIIMEPG 247 Query: 235 EAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESA-------TIYPNTG 286 A T L V+DI N I++ S H+PD L P G Sbjct: 248 SAFAWQTGDLYAQVVDIVTNDGIKTAIMNVSFACHMPDCLEMPYHPVVEGATQCDTPEPG 307 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ + G SCL+GD G + F+ P++IG+ + +D+ Y + N FNG+ P IA+++ Sbjct: 308 THSYRLGGNSCLSGDYMGYWTFDHPLEIGETLVLKDMLHYTTVKTNMFNGVQHPAIALRH 367 Query: 347 VDGTIKAIREFSYNDYYNNL 366 +DG+++ +R F Y+DY + + Sbjct: 368 LDGSVETLRSFDYSDYKSRM 387 >gi|163793816|ref|ZP_02187790.1| D-3-phosphoglycerate dehydrogenase [alpha proteobacterium BAL199] gi|159180927|gb|EDP65444.1| D-3-phosphoglycerate dehydrogenase [alpha proteobacterium BAL199] Length = 420 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 52/386 (13%), Positives = 114/386 (29%), Gaps = 23/386 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + G+ + A+K + + L G S Sbjct: 25 VGTPAYVYSAGAIRTRYRALAAALDPLGIAIHYAVKANSNQAIITLLRGLGAGADVVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ + + +D A+ + + +L + A+ Sbjct: 85 ELARALAAGIPADRIVFAGVGKTRDEMAAALDAGIHLFNIESEPELETLAEVARSKGTTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169 ++GLR+NP+V + ++ G + E GL H + Sbjct: 145 RVGLRVNPNVDAKTHAKITTGKAENKFGVPIERAPAFFARAGELSGVEAVGLSVHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEF------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + + + G+ + ++ G + ++ + +KE Sbjct: 205 LDLEPYRQTYVRVREMALTLRAQGYGLRNLDLGGGLGIGYRGEEGPDPQGLAAIIKEQLG 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---- 278 ++ +EPG +V L V+ + + K V+VD+++ + L Sbjct: 265 DLDFELAVEPGRWLVGAAGVLLARVILVKQGETKRHVVVDAAMNDLIRPTLYEGFHRIEP 324 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 A + G C +GD + V G+ + D Y + +N Sbjct: 325 VVGRDRADAGMADIVGPICESGDYLAKDRPLPAVAAGELLVVRDAGAYGAVMSSTYNARP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D S + Sbjct: 385 LAPEVLVDGDRWTVIRPRQSVDALIA 410 >gi|254387531|ref|ZP_05002770.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294815081|ref|ZP_06773724.1| Diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|326443444|ref|ZP_08218178.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|197701257|gb|EDY47069.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294327680|gb|EFG09323.1| Diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 463 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 124/398 (31%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ G + A K F + + L++ S E Sbjct: 63 GTPAYILDEDDFRARCRAWADAF-GPGADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 ++ + A++ K + AV + I+ ++ ++ + AQ L ++ Sbjct: 122 LLTALDAGMPADRIAFHGNNKSLEEIERAVRAGVGRIVLDSFQEIARVAHVAQGLGVRQR 181 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +RI V + G + + + + GL H + Sbjct: 182 VLIRITVGVEAHTHEFIATAHEDQKFGLPLAGGQAAEGVRRALGLDGLELIGLHSHIGSQ 241 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +++ ++ I LGGG+ + + + + Sbjct: 242 IFDTSGFEVAAHRVVGLLQQVRDEHGVELPEIDLGGGLGIAYTPDDDPREPRHIAKALHE 301 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 +I +EPG AIV T V I + V VD + ++ Sbjct: 302 IVTRECENAGLRPPRISVEPGRAIVGPTAFTLYEVGTIKPLPGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + + P + V G+ C +GDI + F + GD ++ Y Sbjct: 362 ALYDAEYSVSLVSRVSDAAPMLSRVVGKHCESGDIVVKDAFLPADLAPGDLLAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVRDGAARVIVRRETEEDLLR 459 >gi|170742956|ref|YP_001771611.1| diaminopimelate decarboxylase [Methylobacterium sp. 4-46] gi|168197230|gb|ACA19177.1| diaminopimelate decarboxylase [Methylobacterium sp. 4-46] Length = 423 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 111/388 (28%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + +L + G S Sbjct: 25 VGTPFYCYASATLERHFRVFAEAFAGDDPLVCFAVKANSNQAVLASLARLGAGMDIVSEG 84 Query: 62 EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHK 116 E+ GE ++ + A+ + + +L + A+ Sbjct: 85 ELRRALAAGVPGERIVFSGVAKTRAEMAVALDAGILCFNVESEPELEALSEVARARGQTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + +R+NP V + ++ G E + V G+ H + Sbjct: 145 PVSIRVNPDVDARTHAKISTGKSENKFGIPISRAREVYARAAALPGLAVAGVDMHIGSQI 204 Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 + + ++ ++ I GGG+ F ++ Sbjct: 205 TDLAPYDNAASLLAELARDLMAAGHRLHHIDFGGGLGIPYRDDNAPPPDPAAFAAVIRPH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 ++ E G I N L T V+ + E ++ VIVD+ + + L A Sbjct: 265 FRPLGLRPVFEIGRMIAGNAGILVTRVVYVKEGEGRSFVIVDAGMNDLIRPTLYEAYHAL 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 TA V G C +GD V GD ++ Y + +N Sbjct: 325 RPVRQPDPEAPRLTADVVGPVCESGDYLALGREMPAVAPGDLLAVMSAGAYGAVQAGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + SY + Sbjct: 385 TRRLVPEVLVRGAAHAVVRPRQSYEELI 412 >gi|307352865|ref|YP_003893916.1| diaminopimelate decarboxylase [Methanoplanus petrolearius DSM 11571] gi|307156098|gb|ADN35478.1| diaminopimelate decarboxylase [Methanoplanus petrolearius DSM 11571] Length = 431 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 66/395 (16%), Positives = 132/395 (33%), Gaps = 31/395 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++++ N + V+LL A K + L + G S Sbjct: 29 GTPCYVSDEERIRQNFLRYNSALREYYNDVQLLYAAKANGNLSVMRVLAKMGAGADVFSS 88 Query: 61 YEVMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ L E +N + +++ + + ++ +L + + A++ Sbjct: 89 GELHLALLAGMPPEKLLFNGSSKTTEDLELAVDKGVRVSLDSFDELRQLSEVAKRKGKEV 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCEN 169 ++ RINP++ S+ G +++ + G+ H + Sbjct: 149 EVSFRINPALEVPTHPKIATGLATSKFGIPAGQILDAYKAAMEADNVTPVGMHCHIGSQI 208 Query: 170 KSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F + + G ++ +I +GGG+ K + + + Sbjct: 209 LDVAPFGKAAEVMVDLAGKITDLGVRLAFIDIGGGLGIPYNRETDKMPTPEEYAKAVMPV 268 Query: 222 SEK------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275 K Q+++EPG +V ++T L T V + + KN V VD+ + + Sbjct: 269 FLKGIEKLGIKAQLWVEPGRYLVGDSTILLTKVNSVKKAHKNFVNVDAGFNLLIRPAMYD 328 Query: 276 QESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + N T V G C GDI V D ++ D Y + Sbjct: 329 AYHEVVVANRADEAPVETYTVTGPICETGDILAADRKLPVVADSDIMAVLDAGAYGYSMA 388 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + +N + + + R S D N + Sbjct: 389 SQYNSRPRCMEVMVKGEKSAPMRRRESIIDIINTM 423 >gi|307243459|ref|ZP_07525615.1| diaminopimelate decarboxylase [Peptostreptococcus stomatis DSM 17678] gi|306493183|gb|EFM65180.1| diaminopimelate decarboxylase [Peptostreptococcus stomatis DSM 17678] Length = 431 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 127/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ D+ + + + +G + A K F + + + G S+ Sbjct: 30 GSPLFVYDEGLIRDQCRRFHKVLSKSGLDYHISYASKAFICKELVRIMKEEDMGLDVVSV 89 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + + K A+ SN + ++++++ + A Sbjct: 90 GELYNALSVDFDSQKIHLHGNNKTEYEIGYALESNIGCFVVDSLAEVERIDRIAGEMGKR 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 K LR+ P V S+ G + + +E ++ GL FH Sbjct: 150 AKALLRVTPGVEAHTHEFITTGNTDSKFGLNIDNGQAREGVEAILRAENIDLIGLHFHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKDFCQ----RL 218 + A +K + +++ +++GGG D V + + Sbjct: 210 SQIFGTEGSQAAIKKVFVWLKDLKEDLDFEAKILNIGGGFGIRYTDEDVSYPIEDALEEI 269 Query: 219 KEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 ++ Q++LEPG +IV V I E V + H+ Sbjct: 270 IACLKESARSQGLAIPQLWLEPGRSIVGEAGYTLYRVGTIKEIPGVRTYVSIDGGMTDHI 329 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N + G+ C +GD+ + KIGD + Sbjct: 330 RTALYGAKYEVALANRMNEEDASLVTIAGKCCESGDLIAKDVRIPEAKIGDILVVACTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y+ + + +N + P + I+ S D N Sbjct: 390 YHYSMASNYNLMQKPAVVFVGDGKDKIVIKRESLEDLIKN 429 >gi|158312466|ref|YP_001504974.1| diaminopimelate decarboxylase [Frankia sp. EAN1pec] gi|158107871|gb|ABW10068.1| diaminopimelate decarboxylase [Frankia sp. EAN1pec] Length = 437 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 53/401 (13%), Positives = 104/401 (25%), Gaps = 39/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L+++ ++ + + K + + L G + S E Sbjct: 26 GTPTYVYSAATLVDHYVRFAKAFESINPLICFSAKALSNVHLLRLLAGQGAGIDTVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E K D AV + I + +++ A++ ++ Sbjct: 86 LHRALVAGVDPERIVLAGVGKSVDELRAAVRHDIRCINVESEAEVELLARVAREEDRRPR 145 Query: 120 LRINPSVS----YSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCE 168 L I + ++ G + E G H Sbjct: 146 LAIRVNPDIAPDMRTPARTTTAIRGAKFGVDIERAAALFRAASTDEFLRAEGFHVHIGSP 205 Query: 169 NKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 ++ L I + +++GGG + Sbjct: 206 IFDPRVYATALDRILALTAGLEADGHSVTTLNVGGGFPAEYTEGSAPGWDDFAEAICPRL 265 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 + Q+ EPG I N L TV ++V + H+ +Y Sbjct: 266 QGFVDRGGQVVFEPGRTIAANAGILLATVRYRKRAGDRELVVIDAGMTHIVRAAMYDSYH 325 Query: 280 TIYP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 ++P V G C + D + + GD I+ Sbjct: 326 FMWPVTPVNGTVPRSRDQQSIDDLVDYDVVGPICESSDYLAKGRALPAMVSGDLIAIFSA 385 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + R +Y+D Sbjct: 386 GAYGMTMTSNYNSQLRPAEVLVRGGRADLIRRRETYDDLVA 426 >gi|319409426|emb|CBI83072.1| Diaminopimelate decarboxylase [Bartonella schoenbuchensis R1] Length = 424 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 63/388 (16%), Positives = 113/388 (29%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L+ + + + A+K + + L G S Sbjct: 25 VGTPFYCYSANALVTHFQDYQNAFHDIASLIAYAVKANSNQAILRLLAHNGAGADVVSEG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ Y K D + +L + +A L K Sbjct: 85 ELRRALAVGIPAHRIVYAGVGKTVREIDFALAHDICCFNVESEQELEQLSARAVALSKNA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 LR+ P V + ++ G K + V G+ H + Sbjct: 145 RISLRLTPDVDAKTHQKITTGKSENKFGIPLALAYDAYKKAAQLPGLQVCGVAMHIGSQI 204 Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221 K F + + + + I + +GGG+ + D+ +K+ Sbjct: 205 CDLKPFEEAFIIAADFVRHLRNDGYAITHVDIGGGLGVSYGRESCLVPSPFDYAALVKKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + LEPG +IV N L T+V+ +N VIVD+++ + L Sbjct: 265 IAPLGITVILEPGRSIVGNAGVLITSVVYFKRGKGRNFVIVDAAMNDFMRPTLYDAWHDV 324 Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I P A + G C GD ++ GD ++ Y N +N Sbjct: 325 IPVKKTPLNGMMINADIVGPVCETGDYLALDRCLPVLEAGDLLAITGAGAYGAVMANTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + Y Sbjct: 385 SRLLAPEVLVQDTRYAVVRPRLDYAQLI 412 >gi|69244870|ref|ZP_00603094.1| Diaminopimelate decarboxylase [Enterococcus faecium DO] gi|257879077|ref|ZP_05658730.1| diaminopimelate decarboxylase [Enterococcus faecium 1,230,933] gi|257882115|ref|ZP_05661768.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,502] gi|257889908|ref|ZP_05669561.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,410] gi|258615457|ref|ZP_05713227.1| diaminopimelate decarboxylase [Enterococcus faecium DO] gi|260562743|ref|ZP_05833238.1| diaminopimelate decarboxylase [Enterococcus faecium C68] gi|293556549|ref|ZP_06675119.1| diaminopimelate decarboxylase [Enterococcus faecium E1039] gi|293563574|ref|ZP_06678022.1| diaminopimelate decarboxylase [Enterococcus faecium E1162] gi|293567982|ref|ZP_06679321.1| diaminopimelate decarboxylase [Enterococcus faecium E1071] gi|294622605|ref|ZP_06701602.1| diaminopimelate decarboxylase [Enterococcus faecium U0317] gi|314947848|ref|ZP_07851255.1| diaminopimelate decarboxylase [Enterococcus faecium TX0082] gi|68196224|gb|EAN10654.1| Diaminopimelate decarboxylase [Enterococcus faecium DO] gi|257813305|gb|EEV42063.1| diaminopimelate decarboxylase [Enterococcus faecium 1,230,933] gi|257817773|gb|EEV45101.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,502] gi|257826268|gb|EEV52894.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,410] gi|260072902|gb|EEW61262.1| diaminopimelate decarboxylase [Enterococcus faecium C68] gi|291589305|gb|EFF21114.1| diaminopimelate decarboxylase [Enterococcus faecium E1071] gi|291597910|gb|EFF29035.1| diaminopimelate decarboxylase [Enterococcus faecium U0317] gi|291601294|gb|EFF31576.1| diaminopimelate decarboxylase [Enterococcus faecium E1039] gi|291604576|gb|EFF34062.1| diaminopimelate decarboxylase [Enterococcus faecium E1162] gi|313645828|gb|EFS10408.1| diaminopimelate decarboxylase [Enterococcus faecium TX0082] Length = 419 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 66/394 (16%), Positives = 131/394 (33%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y+ D++K+ + + K K+L A K F M + +Y G S Sbjct: 19 KTPLYVYDEEKMRQTMLSFKRGFVSKRFDTKVLYASKAFQTIEMLHLVREYGFGLDVVSG 78 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKK 117 E+ + F +T ++ K E D I+ + + ++ + +Q+ KK Sbjct: 79 GEIYTALQADFPRDTIYFHGNNKTPEELIYALENDLLHIVADNLMEVELLAELSQRYLKK 138 Query: 118 IGLRINPSVS--YSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I + + +V S+ G + ES + G H Sbjct: 139 ICIMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + A + + F + ++LGGG + + +Y+ Sbjct: 199 SQIFDVTAWLAEIDKLTNYLTDFDQPLS-LNLGGGFGIRYTQNDQPIPVEEALKKLIEYT 257 Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274 Q+ +EPG +IV T T+ I + D + ++ L Sbjct: 258 EEALEKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317 Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 E A + G+ C +GD+ + + + GD ++ Y + Sbjct: 318 QAEYDCDLAAKLSEEKTEKVTIAGKMCESGDVVIKEAYLPKAESGDLLAVYSTGAYGYSM 377 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + N + +R +++D Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLIVRRQAFSDLLR 411 >gi|317010302|gb|ADU84049.1| carboxynorspermidine decarboxylase [Helicobacter pylori SouthAfrica7] Length = 405 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 137/400 (34%), Positives = 213/400 (53%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N + +R+ +G K+LLALK +A W F L + ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNANILEIVRQQSGAKILLALKGYAFWREFGILRKKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ EI+A+L ++IFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEINAILPLATSVIFNSFYQYTTYKDRILDKNK 126 Query: 113 KL------HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + + ++ VNGL Sbjct: 127 QLEKLGLSPIKMGLRINPLYSEVTPAIYNPCTKTSRLGIAPSEFEKGVKEHGLEGVNGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ +EW++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLEGMEWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVKNGQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F F+ P+K GD+I F+D+ Sbjct: 306 LKISIENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKILFKDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKIDEQG-FKILKNFSYEDYKNR 404 >gi|317178327|dbj|BAJ56115.1| carboxynorspermidine decarboxylase [Helicobacter pylori F30] Length = 405 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 139/400 (34%), Positives = 211/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESHKEICVYGPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGIVPSEFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++EK F ++ +EW++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENMEWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L T+V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLITSVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F F+ P+K GD+I F+D+ Sbjct: 306 LKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDVPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404 >gi|71083118|ref|YP_265837.1| diaminopimelate decarboxylase [Candidatus Pelagibacter ubique HTCC1062] gi|71062231|gb|AAZ21234.1| Diaminopimelate decarboxylase [Candidatus Pelagibacter ubique HTCC1062] Length = 404 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 68/382 (17%), Positives = 132/382 (34%), Gaps = 21/382 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y ++L N+ + + A+K + + + G S+ E Sbjct: 23 GTPTYCYSHKRLTENIKNFKKNFSSFSPLICFAVKSNTNVNLIREIRKLGLGADVVSMGE 82 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 +M+ + ++ K + + + I + S++ + + A+ K Sbjct: 83 LMMALKAGIDPKKIVFSGVGKTSKEISYAIDKKILLINAESKSEIIEIEKIAKSKKKIVN 142 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 IG+R+NP+ + ++ G K S+ N+ L H + Sbjct: 143 IGIRLNPNTDAKTLKQISTGKKENKFGVDEKTFFELVNFTNHSKNINLKCLSVHIGSQIL 202 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYS 226 + ML + K E+I LGGG+ + + + + +++F + Sbjct: 203 DHKPYEKMLSVVNKIIKKSGHIFEFIDLGGGMGISYEKNSKKLNYQKYNTAIQKFLKGQK 262 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT 285 +I EPG +IV N L + V+ I EN K I+ D+++ + L TI Sbjct: 263 TKIIFEPGRSIVGNIGFLISQVIYIKENTKKDFIILDAAMNDLMRPALYGANHQTIPVVK 322 Query: 286 GP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T G C + D F + +K D + DV Y ++ + +N P Sbjct: 323 NNRISNKTYEFVGPICESTDKFTTIKGFQKLKEKDLVLMCDVGAYGMSLSSNYNVRPKPA 382 Query: 342 IAVKNVDGTIKAIREFSYNDYY 363 + + D Sbjct: 383 ELIIKGSKINIIKKRQKLKDLI 404 >gi|304320595|ref|YP_003854238.1| Orn/DAP/Arg decarboxylase, family 2 [Parvularcula bermudensis HTCC2503] gi|303299497|gb|ADM09096.1| Orn/DAP/Arg decarboxylase, family 2 [Parvularcula bermudensis HTCC2503] Length = 419 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 116/387 (29%), Gaps = 24/387 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ L + D KN + A+K + + L + G S Sbjct: 25 VGTPLYIYSAATLRRHYDILADEFKNRDALIAFAVKALSNIAVLALLGRRGAGADIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK----LHK 116 E+ E ++ K N + FN S+ A Sbjct: 85 ELYRALKAGIPAERVVFSGVAKSRGEMEAALNAGILQFNVESEAELAHLSAVASALGKTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LR+NP V R + G D GL H + Sbjct: 145 PVALRVNPDVDAGTDTRISTGRKDDKFGVPFADAGRLYRLAAALPGLRPQGLTVHIGSQI 204 Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 S F + ++ + LGGG+ + D+ L Sbjct: 205 TSVAPFERAAARVGGLVTSLRAEGHEVTHLDLGGGLGIPYERAAAAPPLPVDYAATLNRA 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + +V++ LEPG I N T VL ++ + +VD ++ + L Sbjct: 265 TADLNVRLILEPGRLIAGNAGLFVTRIVLTKNQEGTHYALVDGAMNDLIRPALYGARHEV 324 Query: 281 IYPNTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + P + G C + D+F + V G ++F Y + + +N Sbjct: 325 MEDTPPTGVPVHHHIAGPVCESTDLFAKDVPLHEVSAGALLAFRTAGAYGAVQASQYNTR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D R +Y + + Sbjct: 385 PLVPEVLVDGDRFTVIRRRPTYEEMLS 411 >gi|223939745|ref|ZP_03631617.1| diaminopimelate decarboxylase [bacterium Ellin514] gi|223891616|gb|EEF58105.1| diaminopimelate decarboxylase [bacterium Ellin514] Length = 432 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 60/396 (15%), Positives = 119/396 (30%), Gaps = 36/396 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ ++ L + + ALK + + TL G S E Sbjct: 26 GSPLYIYSQRTLTEHFQKLDQALAPVDHLICFALKSNSNQAVLRTLADLGGGFDIVSSGE 85 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + K + + +L + A +L K Sbjct: 86 LQRAIAAGADPRKCVFAGVGKTESEIEFALKKGVYSFNVESEPELQRINRIAGRLKKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 I +R+NP+V ++ G ++ + + + GL H + Sbjct: 146 IAVRVNPNVDAHTHAKITTGTYDNKFGIAIENIEGVYARASKLKNIKLRGLQMHIGSQLT 205 Query: 171 SFLCFSAMLKNIEKEFG--HFITQIEWISLGGGIHFTDKD------------------YP 210 S F +K + +E+ S+GGG+ Sbjct: 206 SVEPFEQAVKKVSPLVERLKKKHGLEFFSIGGGLGIVYDPALESSNPEWWRTTKGKKILT 265 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHV 269 + RL + ++I +EPG I N L T + + KN +IVD+++ + Sbjct: 266 PTLYATRLVPLLKPLGLRILMEPGRFISGNAGILVTRIEYVKRTGKKNFLIVDAAMNDLI 325 Query: 270 PDYLLYQESATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + ++ V G C +GD F + + GD ++ Y Sbjct: 326 RPAFYDAYHEIVPLTRKNGQLISSDVVGPICESGDFFAKDRPLPKLGEGDHLALLSAGAY 385 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + +N +M + N + + + Sbjct: 386 GFVMASNYNTRSMAAEVLVNGNKSALVRERQPVEEI 421 >gi|114799974|ref|YP_762135.1| diaminopimelate decarboxylase [Hyphomonas neptunium ATCC 15444] gi|114740148|gb|ABI78273.1| diaminopimelate decarboxylase [Hyphomonas neptunium ATCC 15444] Length = 424 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 59/386 (15%), Positives = 109/386 (28%), Gaps = 25/386 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ L + + V + ++K + TL G S Sbjct: 25 VGTPVYVYSTATLERHARVIAEAFSSQKVLIAYSVKANGNLAVLATLAAEGCGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ K A+ + + +L A L Sbjct: 85 EMQRAMKAGIPAARIVFSGVGKTAAEMKLALEAGIHQFNVESAGELRLLSRVASGLGLKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 I LR+NP V+ + + G + + V G+ H + Sbjct: 145 PIALRVNPDVAAGGHPNISTGKSGDKFGVPWGEAEALYAEAGKLPGIQVVGVDVHIGSQI 204 Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224 A + + I I +GGG+ ++ + Sbjct: 205 GELGPMRAAFEKVVALALRLRGQGHDIRRIDVGGGLGIPYRETDAPAPPSAYAAMIAEVT 264 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + ++ LEPG I N L TT L + +I+D+ + + L Sbjct: 265 AGHGFEVILEPGRVIAGNAGVLLTTALYEKEAPDRTFLIIDAGMNDLIRPALYGAHHDIR 324 Query: 282 YPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + V G C + D F V GDR++F Y + +N Sbjct: 325 PLDEPAQDAAEKVYDVVGPICESTDKFATARTLPKVTPGDRLAFMSAGAYGAVLSSAYNA 384 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDY 362 + + + D R + + Sbjct: 385 RPLVPEVLVSGDRYSIVRRRPDFEEM 410 >gi|315172370|gb|EFU16387.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1346] Length = 436 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 35 GTPLFVYDVAHIRVQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 95 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 335 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431 >gi|289422579|ref|ZP_06424422.1| diaminopimelate decarboxylase [Peptostreptococcus anaerobius 653-L] gi|289157151|gb|EFD05773.1| diaminopimelate decarboxylase [Peptostreptococcus anaerobius 653-L] Length = 431 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 61/399 (15%), Positives = 124/399 (31%), Gaps = 37/399 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P ++ D+ + N + + +G + A K F + + + G S Sbjct: 31 SPLFVYDEDLVTNQCRRFHSVLEGSGLDYHISYASKAFICKYLVGIMAEENMGLDVVSAG 90 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHK 116 E+ F + + K D + ++ ++ + A Sbjct: 91 ELYNALSAGFDPQKIHLHGNNKTDFEIEYALKEDIGCFVIDSFDEVKRLNQIAGQMSKKP 150 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNC 167 + LR+ P V S+ G D +++E ++ G+ FH Sbjct: 151 RCLLRVTPGVEAHTHEYISTGSTDSKFGLNIDNGQAFKGVADILQAENLDLIGIHFHIGS 210 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKDFCQ----RLK 219 + + + F +++ +++GGG D + + + Sbjct: 211 QIFGTEGTRMAVDKVFGWFAKLKKDLDYTPSVLNIGGGFGIRYTDEDLSYPIETALDEII 270 Query: 220 EFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 + S Q++LEPG +IV T + I E V + H+ Sbjct: 271 SCLKDSSKSNNLPIPQLWLEPGRSIVGEACTTLYRIGTIKEIPDVRTYVSVDGGMSDHIR 330 Query: 271 DYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + N + G+ C +GDI +IGD + Y Sbjct: 331 TALYQAKYEVALANKMTAPIFGLYTLAGKCCESGDIIAYDVKLPMPEIGDIAAVSCTGAY 390 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + +N + P + + AI+ S D N Sbjct: 391 HYSMASNYNQMPRPAVVFVKNGTSKLAIKRESMEDLIKN 429 >gi|315224163|ref|ZP_07866003.1| diaminopimelate decarboxylase [Capnocytophaga ochracea F0287] gi|314945896|gb|EFS97905.1| diaminopimelate decarboxylase [Capnocytophaga ochracea F0287] Length = 398 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 58/385 (15%), Positives = 111/385 (28%), Gaps = 27/385 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D QK+ + + + +++ A+K + + + G + S+ Sbjct: 14 GSPVYVYDAQKIASQYNRLTNAFASVPKLRINYAMKALSNISILKLMKDLGAGLDTVSIQ 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG F + + + + + + + +S L +F Q + Sbjct: 74 EVQLGLLAGFDPQQIIFTPNGVSMDEIEEAMRLGVQLNIDNLSFLEQFGT--QHPEIPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173 +RINP V S+ G ++NG+ H + Sbjct: 132 IRINPHVMAGGNSNISVGHIDSKFGISIHQIPHILRIVENTKMHINGIHMHTGSDILDID 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 F + I E +++I G G K+ ++ + L E E Sbjct: 192 VFLYAAE-ILFETAKHFKDLQFIDFGSGFKVPYKEGDIQTNIEELGERLSSRFADFCKEY 250 Query: 234 GE----------AIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280 G +V+ V + + VDS + Sbjct: 251 GRNLTLAFEPGKFLVSEAGYFLVKVNVVKQTTSTVFAGVDSGFNHLIRPMFYGANHYIEN 310 Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I G V G C D F + GD + F + Y + +N Sbjct: 311 ISNPEGKKRFYSVVGYICET-DTFASNRQIAEITEGDILCFHNAGAYCYTMASNYNSRLR 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P + + ++ D Sbjct: 370 PAEVLWQNGEAKLIRKAETFEDLLR 394 >gi|300309533|ref|YP_003773625.1| diaminopimelate decarboxylase [Herbaspirillum seropedicae SmR1] gi|300072318|gb|ADJ61717.1| diaminopimelate decarboxylase protein [Herbaspirillum seropedicae SmR1] Length = 430 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 120/400 (30%), Gaps = 39/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMDG 54 TP Y+ K L+ N + AG + ++K + + + L + G Sbjct: 26 GTPLYVYSKAALVENFSAYANACQQAGRADGGKGGALVCYSVKSNSNLAVLNLLGRLGSG 85 Query: 55 TTSSSLYEV-MLGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 S E+ + ++ +D A+ + ++ ++ + + A Sbjct: 86 FDIVSGGELLRVVAAGGDARKVIFSGVGKGRDEMKLALEHDILCFNVESIPEVARLNEVA 145 Query: 112 QKLHKKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLM 162 L K+ LR+NP+V ++ G +D + V G+ Sbjct: 146 GALGKRARISLRVNPNVDAKTHPYISTGLKENKFGVAYEDALNCYRAAAALPHIEVVGID 205 Query: 163 FHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219 H + L ++ I + +GGGI D L Sbjct: 206 CHIGSQLLDDSPLLEALDKIIDMVDALEAEGIPIHHLDIGGGIGIRYDDEQPVAIGDYLA 265 Query: 220 EFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEA 267 + +Q+ EPG ++V N L T V + KN +VD+++ Sbjct: 266 RVFARVDAWRASKYQGRPIQVMFEPGRSVVGNAGLLLTEVQYLKHGEGKNFAVVDAAMND 325 Query: 268 HVPDYLLYQESATIYPNTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + + P V G C +GD + GD ++ Sbjct: 326 LMRPAMYEAWHGVKTVKENAGQPRIYDVVGPVCESGDWLARSRELA-IGEGDLLALMSAG 384 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + + D + Sbjct: 385 AYGMTMASNYNTRGRAAEVLVDGERAHLIRARENPADLFA 424 >gi|217034692|ref|ZP_03440095.1| hypothetical protein HP9810_880g3 [Helicobacter pylori 98-10] gi|216942832|gb|EEC22327.1| hypothetical protein HP9810_880g3 [Helicobacter pylori 98-10] Length = 405 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGIVPSEFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++EK F ++ +EW++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENMEWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S H+PD L +I Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSVHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 LKISVENGEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404 >gi|313903676|ref|ZP_07837065.1| diaminopimelate decarboxylase [Thermaerobacter subterraneus DSM 13965] gi|313465864|gb|EFR61389.1| diaminopimelate decarboxylase [Thermaerobacter subterraneus DSM 13965] Length = 445 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 58/397 (14%), Positives = 120/397 (30%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + AGV + A K + ++Q + S E Sbjct: 38 GTPLYVLDEAVIRQRCRAYREAMGGAGV-IAYAAKALCTTAILRIMDQEGLWVDAVSAGE 96 Query: 63 VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKK 117 + F + + A+ + ++ + +L++ +A Sbjct: 97 LHTALAAGFPAGRILLHGNNKSDEELRLAIETGVGRVVVDNFHELDRLAAMARAAGRSVP 156 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEIKNVN-------GLMFHNNCE 168 + LR+ P V + S+ G +E+ + ++ G H + Sbjct: 157 VLLRVAPGVEAHTHEFIRTGQQESKFGFDLATGQVLEALDRVLDEPALDWHGFHCHIGSQ 216 Query: 169 NKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKE 220 + + M+ + + + LGGG+ R++ Sbjct: 217 ILAVEPWEQAARIMMDLAAEAHRRTGRFVRELDLGGGLGIRYVPGDEPPSIAETVTRIRT 276 Query: 221 FSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 E+ ++ LEPG +IV TV + + V + + Sbjct: 277 AVERAAGERGLPVPRLILEPGRSIVGEAGVTLYTVGSVKRVPGLMPYVAVDGGMADNPRY 336 Query: 272 YLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + N + GR C +GDI V+ GD ++ YN Sbjct: 337 ALYRALYTAVLANRPLDEPAERVCLVGRYCESGDILIPEIELPRVEPGDVVAVFSTGAYN 396 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + + + +Y+D Sbjct: 397 YSMSSQYNRFPRPAMVLVREGEAAVIVERETYDDLLR 433 >gi|317181308|dbj|BAJ59092.1| carboxynorspermidine decarboxylase [Helicobacter pylori F57] Length = 405 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKETEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S ++ +P SRLG + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSGFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++EK F ++ +EW++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENMEWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L I Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPNI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F F+ P+K GD+I F+D+ Sbjct: 306 LKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404 >gi|78357706|ref|YP_389155.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220111|gb|ABB39460.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 434 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 55/390 (14%), Positives = 116/390 (29%), Gaps = 31/390 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ ++ L + + G ++ + K A + + + S E Sbjct: 28 GSPLYVYNENVLRRRCRELKGLSSHPGFRVNYSAKANANLSLLRIIRSEGLVVDAMSPGE 87 Query: 63 -VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIGL 120 M F + Y E + ++ +++ QL+ K+ + Sbjct: 88 IAMHLAAGFTPDEITYVCNNVSAEELRNAVDHGLLVSVDSLPQLDLLGQV--NPGGKVMI 145 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFLC 174 RINP + ++ G + ++ + GL H Sbjct: 146 RINPGIGAGHHKKVVTGGKETKFGIGPDDGDAVRRILKRHNLTLAGLNQHIGSLFMEPDS 205 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEK---- 224 + ++ + +E + +E I GGG + Y ++ + L + + Sbjct: 206 YMEAVEFLLREAEQW-DSLEVIDFGGGFGIPYRKYEKQPRLDMEATGRMLDDCIGRWAER 264 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATI 281 Y+ + +EPG + + TV + N + D + Sbjct: 265 TGYNGRFMIEPGRYVTAECGVVLGTVHAVKNNGERRFAGTDLGFNVLQRPVMYDAFHDVE 324 Query: 282 YPNTGPYTAM------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + G C +GDI ++ GD I+ D Y + +N Sbjct: 325 IYREDGVPQQETMQQTIVGNICESGDIMAAARELPEIQEGDIIAMLDAGAYGFAMSSSYN 384 Query: 336 GINMPTIAVKNVDGT-IKAIREFSYNDYYN 364 P + + DG R + +D Sbjct: 385 QRLRPAEVLVDKDGRDRLIRRRETLDDLLA 414 >gi|254468165|ref|ZP_05081571.1| diaminopimelate decarboxylase [beta proteobacterium KB13] gi|207086975|gb|EDZ64258.1| diaminopimelate decarboxylase [beta proteobacterium KB13] Length = 417 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 130/384 (33%), Gaps = 23/384 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K+ +L+ ++ + + A+K + + + G S E Sbjct: 28 GTPAYVYSKKHILDQINFLQNALSDIDHLICFAVKANSNLSILKLFKECGCGFDIVSGGE 87 Query: 63 VMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K + N + + +L + D +Q+L K K Sbjct: 88 LQRVLTVDSLNSKIVFSGVGKSVSEIEMALNNNILAFNVESEEELFRINDISQRLSKIAK 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENK 170 + +R+NP+V ++ G K + + + G+ H + Sbjct: 148 VSIRVNPNVDAKTHPYISTGLKDNKFGIDETSAIKLYKKAAKLDHIKITGIDCHIGSQLT 207 Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 F L ++ E +E I +GGGI + + + + Q +K++ K Sbjct: 208 DLSPFEDAFIKLASLIDELESNQIAVEHIDIGGGIGISYNNEDISPIDFYVQMIKKYLLK 267 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI-- 281 Y+ +I LEPG ++ + T V I ++ + VD+++ + L I Sbjct: 268 YNKKIILEPGRFLIGKAGLMLTNVEYIKKSEHKNFVLVDAAMNDLMRPSLYNAFHEVINL 327 Query: 282 -YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G C GD + GD ++ D Y + + +N Sbjct: 328 SNTQDSNDIFDIVGPICETGDFLAKDRNI-KANQGDILAIMDAGAYGFSMSSNYNSRPRV 386 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D +++D Sbjct: 387 PEIIVDKDEFYLIRERENFSDLIA 410 >gi|261837735|gb|ACX97501.1| diaminopimelate decarboxylase [Helicobacter pylori 51] Length = 404 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L + G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ QR+ + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396 >gi|46143532|ref|ZP_00204500.1| COG0019: Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208989|ref|YP_001054214.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae L20] gi|126097781|gb|ABN74609.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 416 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ ++++L++ + A +L K Sbjct: 86 LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + ++ ++ + LGGG+ + K EK Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG AI N L T V + +N IVD+ + + L Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMRITE 325 Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ ++ GD I+ Y + +N Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D S+ D + Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410 >gi|51247744|pdb|1TUF|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase From M. Jannaschi gi|51247745|pdb|1TUF|B Chain B, Crystal Structure Of Diaminopimelate Decarboxylase From M. Jannaschi Length = 434 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 71/398 (17%), Positives = 135/398 (33%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN------AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++ ++++ N + + K + A A + L + G Sbjct: 29 GTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYXANANLAITRLLAKLGCGAD 88 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQK 113 S E+ + + +N K E + N +++S+L + A++ Sbjct: 89 VVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKE 148 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162 L + RINP+V+ ++ G + +E E NV G+ Sbjct: 149 LGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEYVNVVGVH 208 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216 H + F+ + + + E +IE ++LGGG+ + Sbjct: 209 CHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQKDLA 268 Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV 269 LK + + LEPG ++V L V I E V++D+ + + Sbjct: 269 DAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMM 328 Query: 270 PDYLLYQESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + I + G C + D+FG V++GD ++ DV Y Sbjct: 329 RPAMYEAYHHIINCKVKNEKEVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYG 388 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 I+ N +N P + + + G +Y D Sbjct: 389 ISMANNYNARGRPRMVLTSKKGVFLIRERETYADLIAK 426 >gi|332524336|ref|ZP_08400557.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2] gi|332107666|gb|EGJ08890.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2] Length = 424 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 55/382 (14%), Positives = 113/382 (29%), Gaps = 27/382 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + +L+ L + + A+K + + T + G S E Sbjct: 32 GTPLYVYSRTAMLDALAGYQRALEGLPHLICYAIKANSNLAVLQTFARAGCGFDIVSGGE 91 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K A+ ++ +L + + A + Sbjct: 92 LERVLAAGAEPSKIVFSGVGKTAAEMRRALEVGVHCFNVESLGELERLAEVAAAMGRRAP 151 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G + + + V G+ H + Sbjct: 152 VSLRVNPDVDAGTHPYISTGLKDNKFGIPHDEALAVYRRAAALPSLQVVGIDCHIGSQIT 211 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---- 223 + L ++ + + + +GGG+ T D ++ ++ Sbjct: 212 QLEPYLDALGRVLDLVEAVEAEGIALAHVDVGGGLGITYTDEAPPSPETLVRGLADLMRA 271 Query: 224 --KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 Q+ +EPG ++V N L V + + D+++ V + A Sbjct: 272 RGHGHRQLLVEPGRSLVGNAGVLLAEVQYLKPGETKNFCIVDAAMNDLVRPAMYEAWMAI 331 Query: 281 IYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 G T V G C +GD G V GD ++ Y + +N Sbjct: 332 EPCRPGADTVAATWDVVGPVCESGDWLGRDRRLA-VAPGDIVAVLSAGAYGMAMAGNYNS 390 Query: 337 INMPTIAVKNVDGTIKAIREFS 358 + + D Sbjct: 391 RPRAAEILLDGDAVHVVRERED 412 >gi|332799321|ref|YP_004460820.1| diaminopimelate decarboxylase [Tepidanaerobacter sp. Re1] gi|332697056|gb|AEE91513.1| diaminopimelate decarboxylase [Tepidanaerobacter sp. Re1] Length = 444 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 64/401 (15%), Positives = 128/401 (31%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + N N +++ A K F M + + S Sbjct: 29 GTPLYVMDENHIRENCRLYRDSLNNLHENSEVIYAGKAFLTMEMCKLIEEEGLSLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLH-- 115 E+ F + ++ K + I+ + +L +D A+K Sbjct: 89 GELYTAIKSGFPSKRIYFHGNNKSYAELEMAAEYGVGRIVVDNFYELELLRDVAKKYQGK 148 Query: 116 -KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHN 165 KI LR+ P + + S+ G ++ + + + G H Sbjct: 149 KIKILLRLTPGIEAHTHDYIKTGQLDSKFGFGMENGHAFMAVENALSIKGLKLMGFHCHI 208 Query: 166 NCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------D 213 + F M++ + + + I GGG + Sbjct: 209 GSQIFEDEPFKDAAKIMIQFAKIVNERYDFRTREIDFGGGFGIRYTEKDKPLAVKNYIEV 268 Query: 214 FCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 + +KE +K+++ I +EPG AIV T T+ I V + + Sbjct: 269 LVESVKEACKKHNMPIPKILIEPGRAIVGEAGTTLYTIGSIKNIPGVRKYVSVDGGMSDN 328 Query: 269 VPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L E + + N + G+ C +GD+ + GD ++ Sbjct: 329 IRPALYGAEYSAVIANKAGCPREEIVSIAGKCCESGDMLIWDINLPKIMPGDILAVFTTG 388 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y+ + + +N + P + +R +Y D +N Sbjct: 389 AYHYSMASNYNMMPKPAVVFVKNKTARLVVRRQTYEDLLSN 429 >gi|213964250|ref|ZP_03392482.1| diaminopimelate decarboxylase [Capnocytophaga sputigena Capno] gi|213953111|gb|EEB64461.1| diaminopimelate decarboxylase [Capnocytophaga sputigena Capno] Length = 398 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 112/384 (29%), Gaps = 27/384 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 P Y+ D +K+ + + +++ A+K + + + G + S+ EV Sbjct: 16 PVYVYDAEKISSQYQRLTNAFASVPKLRINYAMKALSNIAVLKLMKSLGAGLDTVSIQEV 75 Query: 64 MLGH-EKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 LG F E + EI+ + + + +S L +F Q + +R Sbjct: 76 QLGLLAGFAPEQIIFTPNGVSISEIEEAMRLGVQLNIDNLSFLEQFGT--QHPEVPVCIR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175 INP V S+ G ++NG+ H + F Sbjct: 134 INPHVMAGGNSNISVGHIDSKFGISIHQIPHILRIVENTKMHINGIHMHTGSDILDIDVF 193 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + I E +++I G G K+ ++ + L E + E G Sbjct: 194 LYAAE-ILFETAKNFKDLQFIDFGSGFKVPYKEGDIQTNIEELGERLSTRFAEFCQEYGR 252 Query: 236 ----------AIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESATIY 282 +V+ V + + +DS + + Sbjct: 253 DLTLAFEPGKFLVSEAGCFLVKVNVVKQTTSTVFAGIDSGFNHLIRPMFYGATHYIENLS 312 Query: 283 PNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 G V G C D F + GD + F + Y + +N P Sbjct: 313 NPEGKKRFYSVVGYICET-DTFASNRQIAEITEGDILCFHNAGAYCYTMASNYNSRLRPA 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365 + + ++ D N Sbjct: 372 EVLWQNGEAKLIRKAETFEDLVRN 395 >gi|147677570|ref|YP_001211785.1| diaminopimelate decarboxylase [Pelotomaculum thermopropionicum SI] gi|146273667|dbj|BAF59416.1| diaminopimelate decarboxylase [Pelotomaculum thermopropionicum SI] Length = 440 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 116/398 (29%), Gaps = 36/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y++D+ N G + + A K + + + G S Sbjct: 30 GTPLYVLDEALFRQNCRDYYTHFTVRYGAEAVYAGKALLNLAVCRIVEEEGLGLDVVSGG 89 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ F E ++ K A+ + I+ + + +L A ++ KK Sbjct: 90 ELYTALKANFPAEKIFFHGNNKSSAELAMALETGVGRIVVDNMFELELLNRMAGEVGKKA 149 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNC 167 LR+ P + + S+ G + +E + + G+ H Sbjct: 150 AVILRLTPGIEAHTHEYIKTGQIDSKFGLVIENGQAMAGVRRALEMDGIELKGVHCHIGS 209 Query: 168 ENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + + M+ + + + + +GGG+ + Q + Sbjct: 210 QIFELDSYSQAAKIMMSFVYLVYRETGCLLGELDMGGGLGVYYAEGDKPRPIQEYADVLM 269 Query: 224 KYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 K ++ + +EPG +I T TV I V + + Sbjct: 270 KAVMEKASEYGIPVPKVIVEPGRSICGPAGTTLYTVGAIKNIPGIRKYVAVDGGMGDNPR 329 Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L N V G+ C +GD+ + GD ++ Y Sbjct: 330 PALYQARYEACLANKAGRQPEEVVSVAGKCCESGDMLIWDISLPAAEPGDILAVSCTGAY 389 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N +N + P + + R +Y D Sbjct: 390 NYTMSMNYNRLPRPAMVLVGNGRAELINRRETYEDLIR 427 >gi|188586528|ref|YP_001918073.1| diaminopimelate decarboxylase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351215|gb|ACB85485.1| diaminopimelate decarboxylase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 438 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 65/401 (16%), Positives = 128/401 (31%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++D++ + N I + +L A K F + + + + S Sbjct: 28 DTPLNILDEEHIRNKCRKYRRILEQYYPTTELAYAGKAFLSTTICKIVEEEGLFLDVVSE 87 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F G+ ++ K N I+ ++ +L + AQK Sbjct: 88 GELFTAVQAGFPGDKLLFHGNNKTSRELEYALDCNVGRIVVDSFLELELIEKLAQKKSTR 147 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 +I R+ P + + S+ G + I+S ++ GL H Sbjct: 148 VQIYFRVKPGIEAHTHKYILTGQEDSKFGFSLRQDDIMKAVNFAIKSSYIDLQGLHCHIG 207 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + M++ + + I + LGGG+ + K L Sbjct: 208 SQINESKPYRLAAKTMMELLISIQKIYNYSISELDLGGGMGIKYRSDDSKLDIDSLMNEI 267 Query: 223 EKYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + EPG +I+ + V I E V + ++ Sbjct: 268 SQLILDMAKDSKIELPKLIFEPGRSIIGEAGVMLYRVGVIKEIPGIRNYVSVDGGMSDNI 327 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVA 324 L E + + N Y V G+ C +GD+ + + GD ++ Sbjct: 328 RPALYGAEYSAVVANKANYPHNNSYTVVGKICESGDVLLQNIDLVDNLTPGDLLTVFSCG 387 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + P + + N +R S D N Sbjct: 388 AYTYSMSSNYNRLPKPAVVLVNQGQADLIVRRESLEDVIQN 428 >gi|237751705|ref|ZP_04582185.1| diaminopimelate decarboxylase [Helicobacter bilis ATCC 43879] gi|229373071|gb|EEO23462.1| diaminopimelate decarboxylase [Helicobacter bilis ATCC 43879] Length = 448 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 61/410 (14%), Positives = 119/410 (29%), Gaps = 52/410 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + L + ALK + + +TL + G SL E Sbjct: 18 GTPLYIYDIESLQQQYLKIKDSFGGFKSLVCYALKANSNLSILNTLAKLGSGADCVSLNE 77 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDK--------- 110 V ++ K+ I + +L + + Sbjct: 78 VKRAILAGIPPYKIIFSGVGKEDYEIEEAIKLGILFINVESKMELYRIEAITKRLYGDSI 137 Query: 111 ----------------------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK 148 + + +I +R+NP V ++ G + Sbjct: 138 AKKSSHTTETSQADSLPLTTPESMQYQTRISIRVNPDVDAKTHPYISTGLHENKFGLDIE 197 Query: 149 DKIE-------SEIKNVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISL 198 E SE N G+ +H + + ++ K +++ + Sbjct: 198 SAKELYIYAHKSEFLNPIGIHYHIGSQILDKAPLLESTQKILDLAKSLKALQIPLKFFDI 257 Query: 199 GGGIHFTDKDYP---VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD-ISEN 254 GGG + + ++D+ + + EPG I+ N+ L T V+ Sbjct: 258 GGGFGISYNNEESFVIQDYIHEIIRKIDALDFTAICEPGRFIMGNSGALLTRVIGEKQTA 317 Query: 255 IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK 310 K VIVD ++ + L + + V G C +GD G+ Sbjct: 318 NKRFVIVDCAMNDLLRPSLYHAYHHISHITQKETDSTQICDVVGAICESGDYVGKDIKLP 377 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 + GD + E Y + + +N P + +++ Sbjct: 378 HCESGDLLLIESAGAYGYSMSSNYNSRMRPAEIAIYNGESYLIKERENFD 427 >gi|257883703|ref|ZP_05663356.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,501] gi|257819541|gb|EEV46689.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,501] Length = 419 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 66/394 (16%), Positives = 131/394 (33%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y+ D++K+ + + K K+L A K F M + +Y G S Sbjct: 19 KTPLYVYDEEKMRQTMLSFKRGFVSKRFDTKVLYASKAFQTIEMLHLVREYGFGLDVVSG 78 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKK 117 E+ + F +T ++ K E D I+ + + ++ + +Q+ KK Sbjct: 79 GEIYTALQADFPRDTIYFHGNNKTPEELIYALENDLLHIVADNLMEVELLAELSQRYLKK 138 Query: 118 IGLRINPSVS--YSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I + + +V S+ G + ES + G H Sbjct: 139 ICIMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + A + + F + ++LGGG + + +Y+ Sbjct: 199 SQIFDVTAWLAEIDKLTNYLTDFDQPLS-LNLGGGFGIRYTQNDQPIPVEEALKKLIEYT 257 Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274 Q+ +EPG +IV T T+ I + D + ++ L Sbjct: 258 EEALEKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317 Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 E A + G+ C +GD+ + + + GD ++ Y + Sbjct: 318 QAEYDCDLAAKLSEEKTEKVTIAGKMCESGDVVIKEAYLPKAESGDLLAVYSTGAYGYSM 377 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + N + +R +++D Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLVVRRQAFSDLLR 411 >gi|294618664|ref|ZP_06698199.1| diaminopimelate decarboxylase [Enterococcus faecium E1679] gi|314939328|ref|ZP_07846574.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133a04] gi|314941268|ref|ZP_07848162.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133C] gi|314950672|ref|ZP_07853750.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133A] gi|314992037|ref|ZP_07857488.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133B] gi|314998019|ref|ZP_07862912.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133a01] gi|291595093|gb|EFF26435.1| diaminopimelate decarboxylase [Enterococcus faecium E1679] gi|313587978|gb|EFR66823.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133a01] gi|313593358|gb|EFR72203.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133B] gi|313597094|gb|EFR75939.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133A] gi|313599869|gb|EFR78712.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133C] gi|313641419|gb|EFS05999.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133a04] Length = 419 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 65/394 (16%), Positives = 130/394 (32%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y+ D++K+ + + K K+L A K F M + +Y G S Sbjct: 19 KTPLYVYDEEKMRQTMLSFKRGFVSKRFDTKVLYASKAFQTIEMLHLVREYGFGLDVVSG 78 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKK 117 E+ + F +T ++ K E D I+ + + ++ + +Q+ KK Sbjct: 79 GEIYTALQADFPRDTIYFHGNNKTPEELIYALENDLLHIVADNLMEVELLAELSQRYLKK 138 Query: 118 IGLRINPSVS--YSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I + + +V S+ G + E + G H Sbjct: 139 ICIMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKERSYLELEGFHAHIG 198 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + A + + F + ++LGGG + + +Y+ Sbjct: 199 SQIFDVTAWLAEIDKLTNYLTDFDQPLS-LNLGGGFGIRYTQNDQPIPVEEALKKLIEYT 257 Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274 Q+ +EPG +IV T T+ I + D + ++ L Sbjct: 258 EEALEKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317 Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 E A + G+ C +GD+ + + + GD ++ Y + Sbjct: 318 QAEYDCDLAAKLSEEKTEKVTIAGKMCESGDVVIKEAYLPKAESGDLLAVYSTGAYGYSM 377 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + N + +R +++D Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLIVRRQAFSDLLR 411 >gi|160902683|ref|YP_001568264.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95] gi|160360327|gb|ABX31941.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95] Length = 413 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 71/391 (18%), Positives = 123/391 (31%), Gaps = 31/391 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP+YL D++ + N + T A K A+K + + G SS+ Sbjct: 22 VQTPFYLYDEKGIRNRIKTLKDAFSWADFKEFFAVKATPNPNILKITKEEGCGVDCSSMA 81 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++ F + E + LS + + VS ++ K+K + Sbjct: 82 ELVAAEKSGFVNNEILFTSNDTPLQEYEKALSLNAILNLDDVSHIDLLKEKYKLPD---L 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNN------CEN 169 + I + N S+ G KD I + V H Sbjct: 139 VSIRYNPGGDFGNEIIGNLKESKFGVPKKDLINGFARLKDYGVKRFGLHAMLISNELNPQ 198 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224 + + + + E+I+LGGG K + + +K Sbjct: 199 NIIKVAQFLFETAVEVNKKLVIDFEFINLGGGFGIPYKPEETELDIYYISRQIKKLYENV 258 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY+E G I L T VL I E+ K +D++ + + Sbjct: 259 LLENGLKPPKIYMEHGRYITGPNGYLITKVLHIKESYKKYAGIDANSANLLRPAMYKAYH 318 Query: 279 ATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D +K GD + F DV + + + Sbjct: 319 HITVLNKNSDEKTELYDVVGSLCENNDKLATDRLLPELKRGDVLVFHDVGAHGYSMGYNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + D K IR + +DY+ Sbjct: 379 NGKLRSAEYLFTKDRAFKMIRRAETLDDYFA 409 >gi|86142671|ref|ZP_01061110.1| diaminopimelate decarboxylase [Leeuwenhoekiella blandensis MED217] gi|85830703|gb|EAQ49161.1| diaminopimelate decarboxylase [Leeuwenhoekiella blandensis MED217] Length = 405 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 116/386 (30%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D +K+ + +++ A+K + + ++ + G + S+ Sbjct: 14 GSPVYVYDAEKIESQYKRLTGAFNKVKNLRINYAVKALSNLAVLQLIHGFGAGMDTVSIQ 73 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV L + E++AV I + +S L +F K + Sbjct: 74 EVRLALAAGIDPSKIMFTPNGVSLDELEAVAKMGVQINIDNLSILEQFGTK--HPKTPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173 +RINP V S+ G N+NG+ H + Sbjct: 132 VRINPHVMAGGNTNISVGHIDSKFGISIHQIPHLLRIVKNTGMNINGIHMHTGSDILDID 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229 F + I + +E++ G G K+ ++ + L E K Sbjct: 192 VFLHAAE-ILFDTAKDFKDLEFLDFGSGFKVPYKEGDIETNIEELGEKLSKRFNAFEKNY 250 Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESA--T 280 EPG+ +V+ V I + VDS + Sbjct: 251 GKPLTLVFEPGKFLVSEAGKFLVQVNVIKQTTSTVFAQVDSGFNHLIRPMFYGSRHEITN 310 Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I G V G C D F + GD ++F + Y + + +N Sbjct: 311 ISNPKGRERFYSVVGYICET-DTFATNRRIAEIAEGDILAFSNSGAYCFSMASNYNSRYR 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + +++D N Sbjct: 370 PAEVLFLDGKAHLIRERETFDDLIKN 395 >gi|308062890|gb|ADO04777.1| carboxynorspermidine decarboxylase [Helicobacter pylori Sat464] Length = 405 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 137/400 (34%), Positives = 209/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSEFEKGVKEHGLERVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L I Sbjct: 246 ERYRNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPGI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 LKVSVENDEELIEVERGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404 >gi|307257594|ref|ZP_07539354.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863897|gb|EFM95820.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 416 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMVRLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ ++++L++ + A +L K Sbjct: 86 LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + ++ ++ + LGGG+ + K EK Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG AI N L T V + +N IVD+ + + L Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325 Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ ++ GD I+ Y + +N Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D S+ D + Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410 >gi|303250943|ref|ZP_07337133.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650215|gb|EFL80381.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 416 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMVRLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ ++++L++ + A +L K Sbjct: 86 LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + ++ ++ + LGGG+ + K EK Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG AI N L T V + +N IVD+ + + L Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325 Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ ++ GD I+ Y + +N Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D S+ D + Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410 >gi|237814107|ref|YP_002898558.1| diaminopimelate decarboxylase [Burkholderia pseudomallei MSHR346] gi|237505838|gb|ACQ98156.1| diaminopimelate decarboxylase [Burkholderia pseudomallei MSHR346] Length = 423 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 118/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L + + +A+K + G+ + + G S E Sbjct: 28 GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G ++ K D A+ + ++ +L++ A L Sbjct: 88 LARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D V G+ H + Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAAQPNLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + ++ + QI + +GGG+ T D D ++ + Sbjct: 208 ELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGITYDDETPPDIGAYVRAVLARIDA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I+ EPG ++ N L T V + + KN IVD+++ + A Sbjct: 268 RGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327 Query: 281 I----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + + G C +GD G + GD ++ Y + +N Sbjct: 328 VPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFE 414 >gi|242084786|ref|XP_002442818.1| hypothetical protein SORBIDRAFT_08g003330 [Sorghum bicolor] gi|241943511|gb|EES16656.1| hypothetical protein SORBIDRAFT_08g003330 [Sorghum bicolor] Length = 489 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 117/386 (30%), Gaps = 27/386 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P+YL K ++L N + + A+K + L + G S E+ Sbjct: 95 SPFYLYSKPQILRNFAAYRDALQGLRSIVGYAVKANNNLPVLRVLRELGCGAVLVSGNEL 154 Query: 64 MLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119 L F +N ++ + + ++ L +A + Sbjct: 155 RLALQAGFDPARCIFNGNGKTFEDLKLAAESGVFVNVDSEFDLENIVRAARATGKKVPVL 214 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS 171 LRINP V S+ G + + + G+ H Sbjct: 215 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYPDEIKLVGVHCHLGSTITK 274 Query: 172 FLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSE 223 F + ++E++++GGG+ D ++E Sbjct: 275 VDIFRDAAVLMVNYVDEIRAQGFKLEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVL 334 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIY 282 + + +EPG +++ NT V + N IV A + L Sbjct: 335 SQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIEL 394 Query: 283 PNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + T + G C + D G+ G + D Y ++ + +N Sbjct: 395 VSPPTPGAEVATFDIVGPVCESADFLGKDRELPKPDEGAGLVVHDAGAYCMSMASTYNLK 454 Query: 338 NMPTIAVKNVDGTIKAIR-EFSYNDY 362 P DG+I IR E ++DY Sbjct: 455 LRPPEYWVEEDGSIVKIRHEEKFDDY 480 >gi|126453755|ref|YP_001067996.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1106a] gi|167847626|ref|ZP_02473134.1| diaminopimelate decarboxylase [Burkholderia pseudomallei B7210] gi|242316004|ref|ZP_04815020.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1106b] gi|126227397|gb|ABN90937.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1106a] gi|242139243|gb|EES25645.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1106b] Length = 423 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 119/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L + + +A+K + G+ + + G S E Sbjct: 28 GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G ++ K D A+ + ++ +L++ A L Sbjct: 88 LARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + ++ + QI + +GGG+ T D D ++ + Sbjct: 208 ELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGITYDDETPPDIGAYVRAVLARIDA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I+ EPG ++ N L T V + + KN IVD+++ + A Sbjct: 268 RGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327 Query: 281 I----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + + G C +GD G + GD ++ Y + +N Sbjct: 328 VPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFE 414 >gi|76810164|ref|YP_335101.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710b] gi|167740511|ref|ZP_02413285.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 14] gi|167904581|ref|ZP_02491786.1| diaminopimelate decarboxylase [Burkholderia pseudomallei NCTC 13177] gi|167912845|ref|ZP_02499936.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 112] gi|254190340|ref|ZP_04896848.1| diaminopimelate decarboxylase [Burkholderia pseudomallei Pasteur 52237] gi|254258974|ref|ZP_04950028.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710a] gi|76579617|gb|ABA49092.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710b] gi|157938016|gb|EDO93686.1| diaminopimelate decarboxylase [Burkholderia pseudomallei Pasteur 52237] gi|254217663|gb|EET07047.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710a] Length = 423 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 119/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L + + +A+K + G+ + + G S E Sbjct: 28 GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G ++ K D A+ + ++ +L++ A L Sbjct: 88 LARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + ++ + QI + +GGG+ T D D ++ + Sbjct: 208 ELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGITYDDETPPDIGAYVRAVLARIDA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I+ EPG ++ N L T V + + KN IVD+++ + A Sbjct: 268 RGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327 Query: 281 I----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + + G C +GD G + GD ++ Y + +N Sbjct: 328 VPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFE 414 >gi|53720784|ref|YP_109770.1| diaminopimelate decarboxylase [Burkholderia pseudomallei K96243] gi|53723888|ref|YP_104274.1| diaminopimelate decarboxylase [Burkholderia mallei ATCC 23344] gi|67641896|ref|ZP_00440661.1| diaminopimelate decarboxylase [Burkholderia mallei GB8 horse 4] gi|121598495|ref|YP_994480.1| diaminopimelate decarboxylase [Burkholderia mallei SAVP1] gi|124383764|ref|YP_001027872.1| diaminopimelate decarboxylase [Burkholderia mallei NCTC 10229] gi|126440111|ref|YP_001060712.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 668] gi|126450624|ref|YP_001082967.1| diaminopimelate decarboxylase [Burkholderia mallei NCTC 10247] gi|134283137|ref|ZP_01769838.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 305] gi|167004384|ref|ZP_02270142.1| diaminopimelate decarboxylase [Burkholderia mallei PRL-20] gi|167721539|ref|ZP_02404775.1| diaminopimelate decarboxylase [Burkholderia pseudomallei DM98] gi|167817718|ref|ZP_02449398.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 91] gi|167826115|ref|ZP_02457586.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 9] gi|167896199|ref|ZP_02483601.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 7894] gi|167920804|ref|ZP_02507895.1| diaminopimelate decarboxylase [Burkholderia pseudomallei BCC215] gi|217424773|ref|ZP_03456270.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 576] gi|226198282|ref|ZP_03793853.1| diaminopimelate decarboxylase [Burkholderia pseudomallei Pakistan 9] gi|254174722|ref|ZP_04881383.1| diaminopimelate decarboxylase [Burkholderia mallei ATCC 10399] gi|254180377|ref|ZP_04886975.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1655] gi|254201350|ref|ZP_04907714.1| diaminopimelate decarboxylase [Burkholderia mallei FMH] gi|254206692|ref|ZP_04913043.1| diaminopimelate decarboxylase [Burkholderia mallei JHU] gi|52211198|emb|CAH37187.1| diaminopimelate decarboxylase [Burkholderia pseudomallei K96243] gi|52427311|gb|AAU47904.1| diaminopimelate decarboxylase [Burkholderia mallei ATCC 23344] gi|121227305|gb|ABM49823.1| diaminopimelate decarboxylase [Burkholderia mallei SAVP1] gi|124291784|gb|ABN01053.1| diaminopimelate decarboxylase [Burkholderia mallei NCTC 10229] gi|126219604|gb|ABN83110.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 668] gi|126243494|gb|ABO06587.1| diaminopimelate decarboxylase [Burkholderia mallei NCTC 10247] gi|134245332|gb|EBA45425.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 305] gi|147747244|gb|EDK54320.1| diaminopimelate decarboxylase [Burkholderia mallei FMH] gi|147752234|gb|EDK59300.1| diaminopimelate decarboxylase [Burkholderia mallei JHU] gi|160695767|gb|EDP85737.1| diaminopimelate decarboxylase [Burkholderia mallei ATCC 10399] gi|184210916|gb|EDU07959.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1655] gi|217392229|gb|EEC32254.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 576] gi|225929802|gb|EEH25818.1| diaminopimelate decarboxylase [Burkholderia pseudomallei Pakistan 9] gi|238522908|gb|EEP86350.1| diaminopimelate decarboxylase [Burkholderia mallei GB8 horse 4] gi|243060289|gb|EES42475.1| diaminopimelate decarboxylase [Burkholderia mallei PRL-20] Length = 423 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 119/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L + + +A+K + G+ + + G S E Sbjct: 28 GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G ++ K D A+ + ++ +L++ A L Sbjct: 88 LARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + ++ + QI + +GGG+ T D D ++ + Sbjct: 208 ELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGITYDDETPPDIGAYVRAVLARIDA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I+ EPG ++ N L T V + + KN IVD+++ + A Sbjct: 268 RGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327 Query: 281 I----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + + G C +GD G + GD ++ Y + +N Sbjct: 328 VPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFE 414 >gi|109948161|ref|YP_665389.1| carboxynorspermidine decarboxylase [Helicobacter acinonychis str. Sheeba] gi|109715382|emb|CAK00390.1| carboxynorspermidine decarboxylase [Helicobacter acinonychis str. Sheeba] Length = 405 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 137/400 (34%), Positives = 212/400 (53%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N + + + +G K+LLALK +A W F L + ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNANILEIVHQQSGAKILLALKGYAFWREFGILRKKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ EI+A+L +IIFN+ Q ++ +K + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEINAILPLATSIIFNSFYQYTTYKDRILEKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + + ++ VNGL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKASRLGIVPSEFEKGVKEHGLEGVNGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ +EW++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLEGMEWVNFGGGHHITRSDYDVDLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYCNIEVILEPGEAIGWQCGFLLASVIDIIKNDQEIAILDTSFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F F+ P+K GD+I F+D+ Sbjct: 306 LKISIENDGELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKILFKDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNGI +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGIPLPSLAKIDEQG-FKILKNFSYEDYKNR 404 >gi|317180096|dbj|BAJ57882.1| diaminopimelate decarboxylase [Helicobacter pylori F32] Length = 405 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L + G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ QR+ + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396 >gi|307262007|ref|ZP_07543662.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868290|gb|EFN00112.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 416 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 113/386 (29%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMVRLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + ++ K A+ ++++L++ + A + Sbjct: 86 LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQSGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + ++ ++ + LGGG+ + K EK Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG AI N L T V + +N IVD+ + + L Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325 Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ ++ GD I+ Y + +N Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D S+ D + Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410 >gi|256820962|ref|YP_003142241.1| diaminopimelate decarboxylase [Capnocytophaga ochracea DSM 7271] gi|256582545|gb|ACU93680.1| diaminopimelate decarboxylase [Capnocytophaga ochracea DSM 7271] Length = 398 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 57/385 (14%), Positives = 111/385 (28%), Gaps = 27/385 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D QK+ + + + +++ A+K + + + G + S+ Sbjct: 14 GSPVYVYDAQKIASQYNRLTNAFASVPKLRINYAMKALSNISILKLMKDLGAGLDTVSIQ 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG F + + + + + + + +S L +F Q + Sbjct: 74 EVQLGLLAGFDPQQIIFTPNGVSMDEIEEAMRLGVQLNIDNLSFLEQFGT--QHPEIPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173 +RINP V S+ G ++NG+ H + Sbjct: 132 IRINPHVMAGGNSNISVGHIDSKFGISIHQIPHILRIVENTKMHINGIHMHTGSDILDID 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 F + I E +++I G G K+ ++ + L E E Sbjct: 192 VFLYAAE-ILFETAKHFKDLQFIDFGSGFKVPYKEGDIQTNIEELGERLSSRFADFCKEY 250 Query: 234 GE----------AIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280 G +V+ V + + +DS + Sbjct: 251 GRNLTLAFEPGKFLVSEAGYFLVKVNVVKQTTSTVFAGIDSGFNHLIRPMFYGANHYIEN 310 Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I G V G C D F + GD + F + Y + +N Sbjct: 311 ISNPEGKNRFYSVVGYICET-DTFASNRQIAEITEGDILCFHNAGAYCYTMASNYNSRLR 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P + + ++ D Sbjct: 370 PAEVLWQNGEAKLIRKAETFEDLLR 394 >gi|189347052|ref|YP_001943581.1| diaminopimelate decarboxylase [Chlorobium limicola DSM 245] gi|189341199|gb|ACD90602.1| diaminopimelate decarboxylase [Chlorobium limicola DSM 245] Length = 417 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 121/386 (31%), Gaps = 23/386 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ K+ L +L + ++K + TL G +S E Sbjct: 29 GTPLFVTSKRSLEGSLREFEAAFASLPHITCYSVKANFNLSVISTLAGMGCGCDVNSGGE 88 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + E + + A+ + + ++S+L + A + L Sbjct: 89 LFRALKAGVSPEKIIFAGVGKKPEEIAFALEAGVLMLKVESLSELEAIERIAAEKGLTAP 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCENK 170 + LRINP+V+ + G E + + L H + Sbjct: 149 VALRINPNVTAETHPYITTGDSKEKFGIDEAGLEEAFSLLRRMKHVRLVCLDMHIGSQIF 208 Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + A + F IE++ +GGG T P+ F ++L Sbjct: 209 DPEYYVAATAVLLDIFETARSLGFSIEYLDIGGGFPVTYDARKPATPITYFAEKLMPLLA 268 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 V + EPG +V N + L + +L + K IVD+ + + L Sbjct: 269 AAGVPVIFEPGRFLVANASVLLSRILYKKTNHTGKQFYIVDAGMTELIRPALYQSHHEVL 328 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T+ + A V G C + D F G+ ++ Y + +NG Sbjct: 329 TVIRHEKTVVADVVGPVCESSDFFARQRTIDDAAEGELLAVMSSGAYAAVMSSNYNGRLR 388 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + R +Y N Sbjct: 389 PAEVMVDGQEVTVIRRRETYEQLIAN 414 >gi|72162824|ref|YP_290481.1| diaminopimelate decarboxylase [Thermobifida fusca YX] gi|71916556|gb|AAZ56458.1| diaminopimelate decarboxylase [Thermobifida fusca YX] Length = 461 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 116/398 (29%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ID+ ++A + A K + + + + E Sbjct: 62 GTPLYVIDEADFRARARDYRLAFEDAD--VYYAGKALLTKAVARWVAEEGLKLDVCTGGE 119 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F E + K AV II ++ ++++ + A + + Sbjct: 120 LAVALAAGFPPERIGMHGNNKSAAELARAVEVGVGRIIIDSFDEIDRLERIAAERGRVPE 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + + S + GL H + Sbjct: 180 VLIRVTTGVEAHTHEFVATAHDDQKFGLSLSNGAAAEAVRRLLTSPHLRLVGLHSHIGSQ 239 Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKE 220 F + + + + LGGG+ K L+ Sbjct: 240 IFDTAGFEVAARRLSTFLTQIYAEHGISLPELDLGGGLGIAYLPDDDPLDPKSIADSLRS 299 Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 E +I +EPG AI V + + V + ++ Sbjct: 300 IVEHECAAQNLPVPRIAVEPGRAIAGPAGITLYEVGTVKDVEGIRTYVSVDGGMSDNIRT 359 Query: 272 YLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + + P + + G+ C +GDI + ++ GD ++ Y Sbjct: 360 ALYGAEYTCVLASRHSDAEPMLSRLVGKHCESGDIVVRDLYLPADLRPGDLVAVAATGAY 419 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + +R + D Sbjct: 420 CYSMASNYNHVPRPAVVAVREKNARVLVRRETEEDLLR 457 >gi|332286107|ref|YP_004418018.1| diaminopimelate decarboxylase [Pusillimonas sp. T7-7] gi|330430060|gb|AEC21394.1| diaminopimelate decarboxylase [Pusillimonas sp. T7-7] Length = 420 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 63/387 (16%), Positives = 117/387 (30%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ +Q L + + + V + +K + + + G S E Sbjct: 29 GTPLYVYSRQALHDAWEAYRIASEGRDVLVCYGMKANSNLAVLNEFKNLGTGFDIVSGGE 88 Query: 63 VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ + + ++L + AQ + K Sbjct: 89 LARVLAVGADPAKVVFSGVGKQVWEMQAALEAGVKCFNVESEAELTRLAQVAQDMGKVAP 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 + LR+NP V ++ G + IE + + G+ H + Sbjct: 149 VSLRVNPDVDAQTHPYISTGLKENKFGIAIEKAIEVYQRAATLPSLSIVGVDCHIGSQIT 208 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + L + + ++ + LGGGI D L + + Sbjct: 209 EVSPYLDALDKLIVLIQTLASHNIHLKHLDLGGGIGIRYTDEQPLTPSDLLDKVFQTLGR 268 Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES-- 278 I LEPG ++V N L T V + + KN IVD+++ V L Sbjct: 269 HQLDHLQIVLEPGRSLVGNAGVLLTQVEYLKHSEAKNFAIVDAAMNDLVRPTLYDAWHSV 328 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 A G + G C +GD ++ GD ++ Y + +N Sbjct: 329 EAVKPRQQGDTLYDIVGPICESGDWLARDRKL-TLQQGDLLAIMSAGAYAFTMASQYNTR 387 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D Y Sbjct: 388 PRAAEVMVDGDTAHLVRPREPLESLYA 414 >gi|319651413|ref|ZP_08005542.1| diaminopimelate decarboxylase [Bacillus sp. 2_A_57_CT2] gi|317396944|gb|EFV77653.1| diaminopimelate decarboxylase [Bacillus sp. 2_A_57_CT2] Length = 439 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 62/399 (15%), Positives = 125/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + G+K + A K F+ M +++ S Sbjct: 30 GTPLYVYDVALIRERARGFKQTFDKLGIKAQVAYASKAFSTVAMVQLVDEEGLSLDVVSG 89 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F E ++ K E + + I+ + +L ++ + L Sbjct: 90 GELYTALAADFPPERIHFHGNNKSREELEMALKNQVGCIVVDNFYELELLEEICESLAAR 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 KI LR+ P + + S+ G ++ + S GL H Sbjct: 150 TKILLRVTPGIEAHTHDYILTGQEDSKFGFDLQNGQAETALQKALNSSWIETLGLHCHIG 209 Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ------ 216 + L + + + + + ++LGGG + Sbjct: 210 SQIFDTTGFILAAKKIFEKMAEWKEKHAYEPIVLNLGGGFGIRYTEDDDPIHASQYVEEI 269 Query: 217 --RLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 +K+ +E YS+++ ++EPG ++V + T E VD + ++ Sbjct: 270 IGEVKKQAEHYSMKMPEIWIEPGRSLVGDAGTTLYQTGSRKEVPNVRNYLAVDGGMSDNI 329 Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N T + G+ C +GD+ D ++ Sbjct: 330 RPALYQAKYEAVLANRVLDKPEETVSIAGKCCESGDMLIWDLPLPKAGDQDLLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + ++ +Y D Sbjct: 390 YGYSMANNYNRIPRPPVVFIENGEAKLVVKRETYEDILR 428 >gi|332672809|gb|AEE69626.1| carboxynorspermidine decarboxylase [Helicobacter pylori 83] Length = 405 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGIVPSEFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++EK F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENVAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 LKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404 >gi|20089611|ref|NP_615686.1| diaminopimelate decarboxylase [Methanosarcina acetivorans C2A] gi|19914530|gb|AAM04166.1| diaminopimelate decarboxylase [Methanosarcina acetivorans C2A] Length = 420 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 67/392 (17%), Positives = 121/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N K+ G K A+K + L + G SSL Sbjct: 21 PTPFHIYDEKAIRENARRMKSAFKDVPGFKEFFAVKALPNPFILKILKEEGFGADCSSLP 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E++L G+ ++ E A I + +KA L + + Sbjct: 81 ELILAEKAGMTGDDIMFSSNDTPAEEFAKAKELGGFINLDDISHIHYLEKAAGLPEIVCF 140 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENK------ 170 R NP + ++ G + E K V H + Sbjct: 141 RYNPGPLKEGNAIIGKP-EEAKYGFTREQMFEGYRVLRDKGVKRFGMHTMVASNELNSDY 199 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 + + I + Q E+++LGGGI + + + + ++ Sbjct: 200 FVETARILFELIVEISKELGIQFEFVNLGGGIGIPYRPEQEPVSLEAVAKGVKEAYNATI 259 Query: 231 -----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 LE G I L + V + K+ V +DS + + + Sbjct: 260 TANGLAPLKVYLECGRIITGPYGYLVSQVRHLKSTYKDYVGMDSCMSNLMRPGMYGAYHH 319 Query: 280 TIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F V++GD + D + +N Sbjct: 320 ITVLGKENKPPVHKYDVTGSLCENNDKFAIDRMLPEVEVGDILVIHDTGAHGHAMGFNYN 379 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 G + DG++ IR + DY+ L Sbjct: 380 GKLRSAELLLREDGSVVQIRRAETIEDYFATL 411 >gi|319407825|emb|CBI81478.1| Diaminopimelate decarboxylase [Bartonella sp. 1-1C] Length = 423 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 115/387 (29%), Gaps = 25/387 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y + L+ N + ++ + A+K + + L + G S Sbjct: 25 VGTPFYCYSARTLITNFENYQQAFQDMPSLIAYAVKANSNQAILRLLARSGAGADVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E+ Y+ K + A+ N + +L + +A L Sbjct: 85 ELRRALAAGIPAHRIIYSGVGKTVKEIDFALTQNIHCFNVESEPELEQLSARAAALSTTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 I LRINP V + ++ G E K + G+ H + Sbjct: 145 PISLRINPDVDAKTHKKITTGKSENKFGIPLSSAREVYKKAAQLPSLYICGVDIHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221 F I + +GGG+ D+ +++ Sbjct: 205 CDLKPFEDAFLITADFVRQLWNDGYTITHVDIGGGLGIPYGSEHHSVPSPFDYAALVRKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + I LEPG +IV L T+V+ + +N VIVD+++ + L Sbjct: 265 IAPLGINIILEPGRSIVGEAGILVTSVIHLKRGKERNFVIVDAAMNDFIRPTLYEAWQNV 324 Query: 281 IYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + T A + G C GD G + GD + Y N +N Sbjct: 325 LLVKEKIDTPLINADIVGPVCETGDYLGLNRSLPLLSKGDLLVVTGAGAYGAVMSNTYNS 384 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYY 363 + + Y Sbjct: 385 RLLIPEVLVQDMRYAIIRPRLDYAQLI 411 >gi|332673135|gb|AEE69952.1| diaminopimelate decarboxylase [Helicobacter pylori 83] Length = 405 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L + G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ QR+ + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396 >gi|319406349|emb|CBI79988.1| Diaminopimelate decarboxylase [Bartonella sp. AR 15-3] Length = 424 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 67/388 (17%), Positives = 115/388 (29%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y + L+ N + +N + A+K + + L Q G S Sbjct: 25 VGTPFYCYSARTLITNFENYQQAFQNMPYLIAYAVKANSNQAILRLLAQSGAGADVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ Y+ K + A+ N + +L + +A L Sbjct: 85 ELRRALAAGIPTHRIVYSGVGKTVKEIDFALTQNIHCFNVESEPELEQLSARAVALSTTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 LRINP V + ++ G E K V G+ H + Sbjct: 145 RISLRINPDVDAKTHKKITTGKSENKFGIPLSSAREVYKKAAQLPGLYVCGVDIHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221 F I + +GGG+ + D+ +++ Sbjct: 205 CDLTPFEDAFLITADFVRQLWNDGYAITHVDIGGGLGISYGSEHYSVPSPFDYAALVRKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + I LEPG +IV L T+V+ + +N VIVD+++ + L Sbjct: 265 IAPLGINIILEPGRSIVGEAGILVTSVIHLKRGKERNFVIVDAAMNDFIRPTLYEAWQNV 324 Query: 281 IYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P A + G C GD G + GD + Y N +N Sbjct: 325 LLVKEKPIDTLLINADIVGPVCETGDYLGLNRSLPILSTGDLLVITGAGAYGAVMSNTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + Y Sbjct: 385 SRLLIPEVLVQDAHYAVIRPRLDYGQLI 412 >gi|116754057|ref|YP_843175.1| diaminopimelate decarboxylase [Methanosaeta thermophila PT] gi|116665508|gb|ABK14535.1| diaminopimelate decarboxylase [Methanosaeta thermophila PT] Length = 440 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 74/383 (19%), Positives = 126/383 (32%), Gaps = 32/383 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + +L N+ A+K + L Q G S E Sbjct: 43 GTPVYVTSEDRLRENIRRYHRAF--PDADKYFAVKANGNISIIRILAQEGAGADVFSAGE 100 Query: 63 VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118 + L E +N +D E+ +++ + ++ +L A + + +I Sbjct: 101 LYLARLAGVPRERILFNGNSKRDEELRMAVTSGVRVSIDSEEELESLSRIASEESKNVEI 160 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENKS 171 R+NP +S + S+ G + + + GL H + Sbjct: 161 LFRVNPDISVNTHPKIATGLKSSKFGIPAQSVRSICEKAMHMDGIKPIGLHCHIGSQILD 220 Query: 172 FLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFSE 223 FS + G +E + LGGG+ + E Sbjct: 221 VSSFSEAAARMMDLVGEIVDIGGDMELLDLGGGLGIQYDPAAPPAPSPEDLANAVLPVIE 280 Query: 224 KYSVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 + S ++ LEPG +IV +TT L T V + V VD+ L Sbjct: 281 RRSEELGVRLKLILEPGRSIVADTTILLTGVNVVKRAHVTFVGVDAGFNVLARPMLYDAY 340 Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + N V G C +GD+ VK GD ++F D Y + + Sbjct: 341 HYIVVANRADAEISERYTVVGPICESGDVLARNRALPVVKKGDILAFLDAGAYGFSMSSQ 400 Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356 +NG P + DG ++ IR+ Sbjct: 401 YNGQPRPAEVLVR-DGEVELIRK 422 >gi|294339197|emb|CAZ87551.1| Diaminopimelate decarboxylase (DAP decarboxylase ) [Thiomonas sp. 3As] Length = 430 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 120/389 (30%), Gaps = 28/389 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLL--LALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ + + + + V + A+K + + L + G S Sbjct: 37 GTPTYVYSRASIEEAAQRYSQAAQASSVHVALRYAVKANSNLAVLQLLARLGWGFDIVSA 96 Query: 61 YEVMLGHEKFG--GETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ G G+ V D A+ + + S+L AQ K Sbjct: 97 GELKRVLAAGGEAGKVVFSGVGKSADDMRFALDVGVECFNVESPSELAALNRVAQAAGKV 156 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168 LR+NP V ++ G + E + G+ H + Sbjct: 157 ARVALRVNPDVDAGTHPYISTGLKTNKFGISQDQAAQLALQTAQLEQVQLVGIACHIGSQ 216 Query: 169 NKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + + L ++ ++ H +IE I LGGG+ D + L + Sbjct: 217 ITTVEPYLDALDKVLDLVEQMEHKGAKIEHIDLGGGLGIRYTDETPPTPQEWLSPLLARI 276 Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES 278 + +EPG +IV N L T L + +K+ +VD+ + + L E Sbjct: 277 SARGFGHRTVVIEPGRSIVGNAGVLLTRTLFLKSTPVKHFAVVDAGMNDLIRPALYSAEQ 336 Query: 279 ATIYPNTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 A + + G C + D ++ GD ++ Y + + +N Sbjct: 337 AVVLAEQREGSALKYDIVGPVCESADWLARDRALV-LEEGDLLAILSSGAYGMVMASNYN 395 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 P + + + Y Sbjct: 396 SRGRPAEVMIDGATATLIRPRETPEQLYA 424 >gi|317181634|dbj|BAJ59418.1| diaminopimelate decarboxylase [Helicobacter pylori F57] Length = 405 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L + G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ QR+ + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKFYDYAQRILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELIMQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEAGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396 >gi|317177106|dbj|BAJ54895.1| diaminopimelate decarboxylase [Helicobacter pylori F16] Length = 405 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L + G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IHRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ QR+ + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELIMQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396 >gi|311030741|ref|ZP_07708831.1| diaminopimelate decarboxylase [Bacillus sp. m3-13] Length = 441 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 58/399 (14%), Positives = 120/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + KN GVK + A K F++ MF + + S Sbjct: 30 GTPLYVYDVALIRERSRDFQTTFKNLGVKAQVAYASKAFSSVAMFQLIKEEGLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + ++ K E + ++ + +L +D Sbjct: 90 GELYTALVADFPVDRIHFHGNNKSVEELEMAVEKKIGCVVVDNFLELTLLQDICKKHGYT 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I LR+ P ++ + S+ G + + ++ G+ H Sbjct: 150 MPILLRVTPGINAHTHDYILTGQEDSKFGFDLQSGQAHEAMKIASNATHLDLLGIHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQR----- 217 + F + + + ++LGGG + Sbjct: 210 SQIFETTGFKLAAGKLFDTLKEWNEQEGFEARVVNLGGGFGIRYTEEDNPLPASVYVEEI 269 Query: 218 ---LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 ++ F + + +I++EPG ++V + T +V E +D + ++ Sbjct: 270 ITDVQSFVKDHGLKMPEIWIEPGRSLVGDAGTTIYSVGSKKEIPNIRHYLAIDGGMTDNI 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + + G+ C +GD+ D ++ Sbjct: 330 RPALYQAKYEAVLANRVEDEADDKVSIAGKCCESGDMLIWDLPLPKANHEDYLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y N +N I P + IR ++ D Sbjct: 390 YGYAMANNYNRITKPAVVFVEDGEVQLVIRRETFEDLVR 428 >gi|310823824|ref|YP_003956182.1| diaminopimelate decarboxylase [Stigmatella aurantiaca DW4/3-1] gi|309396896|gb|ADO74355.1| Diaminopimelate decarboxylase [Stigmatella aurantiaca DW4/3-1] Length = 413 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 55/386 (14%), Positives = 115/386 (29%), Gaps = 22/386 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + L + + + ++K + + G S Sbjct: 25 VGTPTYVYSQAALTGHFQVLDKAFGESPHLICYSVKANSTLAVLGLFAGMGSGFDIVSGG 84 Query: 62 EV---MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ G A ++ A+ + + +L ++ Sbjct: 85 ELARVRQARGDMGKTVFAGVGKTQEEMARALAAGILLFNVESAEELEALDAVGRQAGRRA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCEN 169 GLR+NP V S+ G ++ + + G+ H + Sbjct: 145 PFGLRVNPDVDARTHRYISTGLKTSKFGVPFEEAVALYARARKMKGVRALGVDCHIGSQL 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223 A L + + +E++ +GGG+ T D +++ + + E + Sbjct: 205 TRTAPVKAALSKVAGLYAELKAQGHPLEYLDIGGGLGITYADETPPSPQEYARTVLEVVK 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---A 279 ++ LEPG ++V N L T VL + K V+VD+ + + L Sbjct: 265 GTGARLILEPGRSLVGNAGVLLTRVLYRKQAPAKTFVVVDAGMNDLIRPALYEAHHALLP 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + V G C + D+ + G + Y ++ + +N Sbjct: 325 VVKQRGKAVEVDVVGPVCESTDVLARARPLVLPRQGALFAVMSAGAYGMSMASTYNSRPR 384 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + D + Sbjct: 385 PAEVLVEGTAWRVVRERERDEDLWRR 410 >gi|115372602|ref|ZP_01459909.1| diaminopimelate decarboxylase [Stigmatella aurantiaca DW4/3-1] gi|115370323|gb|EAU69251.1| diaminopimelate decarboxylase [Stigmatella aurantiaca DW4/3-1] Length = 457 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 55/386 (14%), Positives = 115/386 (29%), Gaps = 22/386 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + L + + + ++K + + G S Sbjct: 69 VGTPTYVYSQAALTGHFQVLDKAFGESPHLICYSVKANSTLAVLGLFAGMGSGFDIVSGG 128 Query: 62 EV---MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ G A ++ A+ + + +L ++ Sbjct: 129 ELARVRQARGDMGKTVFAGVGKTQEEMARALAAGILLFNVESAEELEALDAVGRQAGRRA 188 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCEN 169 GLR+NP V S+ G ++ + + G+ H + Sbjct: 189 PFGLRVNPDVDARTHRYISTGLKTSKFGVPFEEAVALYARARKMKGVRALGVDCHIGSQL 248 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223 A L + + +E++ +GGG+ T D +++ + + E + Sbjct: 249 TRTAPVKAALSKVAGLYAELKAQGHPLEYLDIGGGLGITYADETPPSPQEYARTVLEVVK 308 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---A 279 ++ LEPG ++V N L T VL + K V+VD+ + + L Sbjct: 309 GTGARLILEPGRSLVGNAGVLLTRVLYRKQAPAKTFVVVDAGMNDLIRPALYEAHHALLP 368 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + V G C + D+ + G + Y ++ + +N Sbjct: 369 VVKQRGKAVEVDVVGPVCESTDVLARARPLVLPRQGALFAVMSAGAYGMSMASTYNSRPR 428 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + D + Sbjct: 429 PAEVLVEGTAWRVVRERERDEDLWRR 454 >gi|120601731|ref|YP_966131.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris DP4] gi|120561960|gb|ABM27704.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris DP4] Length = 421 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 53/388 (13%), Positives = 107/388 (27%), Gaps = 29/388 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ + L + + G ++ + K + + + + + S E Sbjct: 28 GSPLYVYSEAILRQRCREMKALSSHPGFRVNYSAKANSNLALLHIIREEGLVVDAMSPGE 87 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIGL 120 + M F + Y E + ++ +++SQL+ + + ++ + Sbjct: 88 LFMNLRAGFSPDQILYVCNNVSAEELGNAVSHGLLVSVDSLSQLDLYGEV--NPGGRVMV 145 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENKSFLCFS 176 R NP + ++ G E N+ + + + S Sbjct: 146 RFNPGIGAGHHKKVVTAGKETKFGVDPASIDEVRTILARHNLTLAGINQHIGSLFLEPES 205 Query: 177 A-MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE------------FSE 223 +E I GGG Y + Sbjct: 206 YVEAARFLLTLAERFDDVEVIDFGGGFGIPYHKYDSQRRLDLAAMGAQFDDLISGWAHRR 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 Y + +EPG +V L +V + V D + Sbjct: 266 GYRGRFLVEPGRYVVAECGLLLGSVHSVKSNGANRYVGTDLGFNVLARPVMYDAHHDIEV 325 Query: 283 PNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 V G C +GDI + PV+ GD + D Y + +N Sbjct: 326 YREDGEPSGLLLPQTVVGNICESGDIIAKNRPLPPVEEGDILGVLDAGAYGYVMSSSYNQ 385 Query: 337 INMPTIAVKNVDGT-IKAIREFSYNDYY 363 P + +++G R + +D Sbjct: 386 RMRPAEVLIDLEGRPRLVRRRETLDDLV 413 >gi|295133498|ref|YP_003584174.1| diaminopimelate decarboxylase [Zunongwangia profunda SM-A87] gi|294981513|gb|ADF51978.1| diaminopimelate decarboxylase [Zunongwangia profunda SM-A87] Length = 407 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 115/385 (29%), Gaps = 27/385 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D +K+ + +++ A+K + + +++ G + S+ Sbjct: 14 GSPVYVYDAEKIEAQYKRLTSAFSSIKKLRIHYAVKALSNISILKFIDKLGSGLDTVSIQ 73 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG + E + I + +S L +F ++ + Sbjct: 74 EVQLGIKAGVDPSKIIFTPNGVSLEEIEKVAKLGVQINIDNLSILEQFG--SRHPKTPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFL 173 +RINP V S+ G +E+ +NG+ H + Sbjct: 132 IRINPHVMAGGNSKISVGHIDSKFGISIHQMPLLKRIVENTGMTINGIHMHTGSDILDIQ 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230 F + I + +E+I G G K+ ++ + L + Sbjct: 192 VFIQASE-ILFDAAKNFKNLEFIDFGSGFKVPYKEGDIETDIEELGTKLSEKFKAFCTEY 250 Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY 282 EPG+ +V+ + V I + +D+ + Sbjct: 251 GKELTLAFEPGKYLVSESGKFLAKVNVIKQTTSTVFAGIDTGFNHLIRPMFYGSHHEINN 310 Query: 283 PNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + V G C D F + GD ++F + Y + + FN Sbjct: 311 ISNSNGKQRFYSVVGYICET-DTFASNRRITEITEGDILAFSNAGAYCYSMSSNFNSRFR 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P + +++D Sbjct: 370 PAEVLWYKGEAHLIRERETFDDLLR 394 >gi|322513198|ref|ZP_08066326.1| diaminopimelate decarboxylase [Actinobacillus ureae ATCC 25976] gi|322121029|gb|EFX92862.1| diaminopimelate decarboxylase [Actinobacillus ureae ATCC 25976] Length = 416 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 63/390 (16%), Positives = 115/390 (29%), Gaps = 27/390 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDKAFGSHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ ++++L++ + A +L K Sbjct: 86 LERVLAAGGDPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNQAREVYLLAKSLPNVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + + ++ + LGGG+ + K EK Sbjct: 206 ELQPFLDATDRLIVLMDQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG AI N L T V + +N IVD+ + + L Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325 Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ ++ GD I+ Y + +N Sbjct: 326 VDQSLVREKTVYDVVGPICETSDFLGKGRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY--YNNL 366 + + D S+ D L Sbjct: 385 QAVEIMVDSDLAHLIKARASFADLWRLERL 414 >gi|257085239|ref|ZP_05579600.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis Fly1] gi|256993269|gb|EEU80571.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis Fly1] Length = 436 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 35 GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 95 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 275 VYSLKDHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 335 RPALYQAVYDGFLANRDGHDSIKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R ++ D Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETHEDM 431 >gi|240947851|ref|ZP_04752291.1| Diaminopimelate decarboxylase [Actinobacillus minor NM305] gi|240297813|gb|EER48249.1| Diaminopimelate decarboxylase [Actinobacillus minor NM305] Length = 416 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 116/386 (30%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDNAFGDHPHLICFAVKSNSNIALLNIMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A ++S+L++ + A +L K Sbjct: 86 LERVLAAGGDPSKVVFSGVAKSHAEIARALEVGIRCFNVESISELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 I LR+NP V ++ G + + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVQQAREVYRLASHLPNVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ +P + L++ + Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIRLHHLDLGGGLGVPYHGEEPPHPTEYAKALLEKLKD 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L T V + N IVD+ + + L Sbjct: 266 YQDLEIILEPGRAITANAGILVTKVEYLKTNEDRRFAIVDTGMNDMIRPALYEAYMELTE 325 Query: 283 PN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + +N Sbjct: 326 VDRSLSREKAVYDVVGPICETSDFLGKQRELA-IAEGDLIAMRSAGAYGATMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + S+ D + Sbjct: 385 QAVEIMVDSANYYLIKARASFEDLWR 410 >gi|209883910|ref|YP_002287767.1| diaminopimelate decarboxylase [Oligotropha carboxidovorans OM5] gi|209872106|gb|ACI91902.1| diaminopimelate decarboxylase [Oligotropha carboxidovorans OM5] Length = 422 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 58/383 (15%), Positives = 112/383 (29%), Gaps = 29/383 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL + G S Sbjct: 25 LGTPFYCYSTATLERHYRVFTEAFAGVDTLVCYAMKANSNQSVLRTLARLGAGADVVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+M + ++ K A+ N I + +L+ A + + Sbjct: 85 ELMRARAAGIPADKIVFSGVGKTEGELRQALAENILCINVESEPELDLLSRVADETGQVA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 LR+NP + + ++ G + + G+ H + Sbjct: 145 RVSLRLNPDIGAGGHAKISTGKSENKFGIPLSRARGVYARAAKLPGIRLTGVDMHIGSQI 204 Query: 170 KSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 A + I+ I GGG+ + + + +K Sbjct: 205 TDLAPLEAAFALLVDFVRTLRADGHAIDHIDFGGGLGIPYESDLPVPPTPAAYAEVVKRV 264 Query: 222 SEKY-SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 + ++ EPG IV N L + V+ + +N VI+D+++ + LY+ Sbjct: 265 TRGLDDCRLLFEPGRMIVGNAGILVSRVIYVKHGEGRNFVIIDAAMNDLIRPT-LYEAHH 323 Query: 280 TIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 I P A V G C GD + GD ++ Y + Sbjct: 324 DILPVREAAPNDPSLVADVVGPVCETGDYLALGRRLPALAAGDLVAVMSSGAYGAVQAGT 383 Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356 +N + + Sbjct: 384 YNTRPLVPEVLVKGGDYAVVRPR 406 >gi|317008940|gb|ADU79520.1| diaminopimelate decarboxylase [Helicobacter pylori India7] Length = 405 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IHRALKAGIKPYRIVFSGVGKSESEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K V+VD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD+++ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKDVHLPELEPGDKLAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|228472782|ref|ZP_04057540.1| diaminopimelate decarboxylase [Capnocytophaga gingivalis ATCC 33624] gi|228275833|gb|EEK14599.1| diaminopimelate decarboxylase [Capnocytophaga gingivalis ATCC 33624] Length = 401 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 119/384 (30%), Gaps = 27/384 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 P Y+ D K+ + + + +++ A+K + + + + G + S+ EV Sbjct: 16 PVYVYDAYKIRSQYERLIKAFAAVPSLRINYAMKALSNGSILKLMRKLGAGLDTVSIQEV 75 Query: 64 MLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 LG F E + E + S + + +S L +F K + +R Sbjct: 76 KLGLHAGFAPEQIIFTPNGVSMEEIEEAASLGVQLNIDNLSILEQFGSK--HPQVPVCIR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLCF 175 INP V S+ G +E+ ++NG+ H + F Sbjct: 134 INPHVMAGGNSKISVGHIDSKFGISIHQVPHILRIVENTKMHINGIHMHTGSDILDIDVF 193 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230 + I + ++++I G G K+ ++ + L E + ++ Sbjct: 194 LYAAE-ILFDAAKHFRELKFIDFGSGFKVPYKEGDIQTDIEELGEKLSQRFLEFCKLYGK 252 Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES--ATIY 282 EPG+ +V+ V + + +DS + I Sbjct: 253 DLTLAFEPGKFLVSEAGFFLVKVNVVKQTTSTVFAGIDSGFNHLIRPMFYGATHFIENIS 312 Query: 283 PNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 G V G C D F + GD + F + Y + +N P Sbjct: 313 NPEGKKRFYSVVGYICET-DTFASNRQIAEISEGDILCFRNAGAYCYTMASNYNSRPRPA 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365 + + + D N Sbjct: 372 EVLWIDGQAKLIRKAETLEDLLRN 395 >gi|159039562|ref|YP_001538815.1| diaminopimelate decarboxylase [Salinispora arenicola CNS-205] gi|157918397|gb|ABV99824.1| diaminopimelate decarboxylase [Salinispora arenicola CNS-205] Length = 470 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 61/407 (14%), Positives = 124/407 (30%), Gaps = 47/407 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D++ L + A K F + + + S E Sbjct: 62 GTPVYVLDEEDLRTRCRDFRAAFPTED--VYYAGKAFLCRAVVRMIAEEGLHLDVCSGGE 119 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + E ++ K A+ + II ++ ++++ A++ + + Sbjct: 120 LATALAAGMPPERIGFHGNNKSVAELSRALDAGVGRIIVDSSHEIDRLTGLARERGVRPR 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + +R+ V + G ++ ++ + GL H + Sbjct: 180 VLVRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAIAAVLRILDEDVLELRGLHSHIGSQ 239 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKE 220 F +L + Q+ + LGGG +RL++ Sbjct: 240 IFDASGFEVSARRVLALQAQIRDARGVQLPELDLGGGFGIAYTTQDDPATPADLAKRLRK 299 Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVL-----------DISENIKNLVIVD 262 + + +EPG AIV V D ++ + V VD Sbjct: 300 IVDGECAAERLAVPHLSIEPGRAIVGPAMFTLYEVGTVKSVPVGAGGDTADGHRCYVSVD 359 Query: 263 SSVEAHVP----DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDR 317 + ++ D A+ P A V G+ C +GDI + F V+ GD Sbjct: 360 GGMSDNIRTALYDASYSATVASRASGAAPVLARVVGKHCESGDIVVKDEFLPADVQPGDL 419 Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 ++ Y + + +N + P + +R + D Sbjct: 420 VAVPGTGAYCRSMASNYNHVLRPPVVAVRDGQARLIVRRETEEDLLA 466 >gi|326336124|ref|ZP_08202296.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691633|gb|EGD33600.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 401 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 118/384 (30%), Gaps = 27/384 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 P Y+ D K+ + + +++ A+K + + + + G + S+ EV Sbjct: 16 PVYVYDADKITSQYKRLTKAFDHVPSLRINYAMKALSNVSILKLMRKLGAGLDTVSIQEV 75 Query: 64 MLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 LG F E + E + S + + +S L +F K + + +R Sbjct: 76 KLGLHAGFTPEQIIFTPNGVSIEEIEEAASLGVQLNIDNLSILEQFGSK--HPNIPVCIR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175 INP V S+ G ++NG+ H + F Sbjct: 134 INPHVMAGGNSKISVGHIDSKFGISIHQIPHILRIVENTKMHINGIHMHTGSDILDIDVF 193 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230 + I + + ++++I G G K+ V+ + L E ++ Sbjct: 194 LYAAE-ILFDTAKYFRELQFIDFGSGFKIPYKEGDVQTNIEELGEKLSNRFLEFCKLYGR 252 Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESATIY 282 EPG+ +V+ V I + +DS + + Sbjct: 253 NLTLAFEPGKFLVSEAGFFLVKVNVIKQTTSTVFAEIDSGFNHLIRPMFYGAIHFIENLS 312 Query: 283 PNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 G V G C D F + GD + F + Y + +N P Sbjct: 313 NPEGKKRFYSVVGYICET-DTFASNRQIAEISEGDILCFRNAGAYCYTMASNYNSRPRPA 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365 + + ++ D +N Sbjct: 372 EVLWIGGQAKLIRKAETFEDLLHN 395 >gi|187935097|ref|YP_001887472.1| diaminopimelate decarboxylase [Clostridium botulinum B str. Eklund 17B] gi|187723250|gb|ACD24471.1| diaminopimelate decarboxylase [Clostridium botulinum B str. Eklund 17B] Length = 431 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 68/400 (17%), Positives = 131/400 (32%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + N + K N+ ++ A K F M +N+ S Sbjct: 29 GTPLYVMDEGLIRQNCNEYYKYFKCDNSSNRVAYAGKAFLTLEMCKIINEENLSLDVVSG 88 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + H+ F + ++ K + V + + ++ + A Sbjct: 89 GELFIAHKSGFPLDKVMFHGNNKTLDEIELGVKLGVGRFVVDNYYEMEELNRIAASYNKI 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG-----EKCKDKIES----EIKNVNGLMFHNN 166 +K+ LRI P + + S+ G +D I ++GL H Sbjct: 149 QKVFLRITPGIEAHTHEYIKTGQVDSKFGFAPVGNMIEDAINKSINLPNIELSGLHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKD----FCQRL 218 + + ++ + I+ + LGGG +C+ + Sbjct: 209 SQIFEIEPYEDAVEIMLGLIKKIKQNTGYLIKELDLGGGFGIYYNRGDKPKTTKEYCEAI 268 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 ++ + +EPG +IV N+ TV I + V + ++ Sbjct: 269 LNKVDEVCSRTGLSKPSLIIEPGRSIVGNSGITLYTVGSIKDIPGVRKYVSVDGGMSDNI 328 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + E + N T +CG+ C +GDI + D +S Sbjct: 329 RPALYHAEYECMLANKVEKDLKETVTICGKCCESGDILLNDVNISTPQSNDILSVMTTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + R +Y D N Sbjct: 389 YGYSMSNNYNKIPRPPVVMVKDNKERLICRRETYEDLIQN 428 >gi|158523325|gb|ABW70801.1| diaminopimelate decarboxylase [Helicobacter pylori] Length = 405 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD+I+ E V Y + + +N Sbjct: 312 TPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|261208139|ref|ZP_05922814.1| diaminopimelate decarboxylase [Enterococcus faecium TC 6] gi|289566337|ref|ZP_06446766.1| diaminopimelate decarboxylase [Enterococcus faecium D344SRF] gi|294614568|ref|ZP_06694473.1| diaminopimelate decarboxylase [Enterococcus faecium E1636] gi|260077723|gb|EEW65439.1| diaminopimelate decarboxylase [Enterococcus faecium TC 6] gi|289161846|gb|EFD09717.1| diaminopimelate decarboxylase [Enterococcus faecium D344SRF] gi|291592549|gb|EFF24153.1| diaminopimelate decarboxylase [Enterococcus faecium E1636] Length = 419 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 66/394 (16%), Positives = 131/394 (33%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y+ D++K+ + + K K+L A K F M + +Y G S Sbjct: 19 KTPLYVYDEEKMRQTMLSFKRGFVSKRFDTKVLYASKAFQTIEMLYLVREYGFGLDVVSG 78 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKK 117 E+ + F +T ++ K E D I+ + + ++ + +Q+ KK Sbjct: 79 GEIYTALQADFPRDTIYFHGNNKTPEELIYALENDLLHIVADNLMEVELLAELSQRYLKK 138 Query: 118 IGLRINPSVS--YSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I + + +V S+ G + ES + G H Sbjct: 139 ICIMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + A + + F + ++LGGG + + +Y+ Sbjct: 199 SQIFDVTAWLAEIDKLTNYLTDFDQPLS-LNLGGGFGIRYTQNDQPIPVEEALKKLIEYT 257 Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274 Q+ +EPG +IV T T+ I + D + ++ L Sbjct: 258 EEALEKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317 Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 E A + G+ C +GD+ + + + GD ++ Y + Sbjct: 318 QAEYDCDLAAKLSEEKTEKVTIAGKMCESGDVVIKEAYLPKAESGDLLAVYSTGAYGYSM 377 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + N + +R +++D Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLIVRRQAFSDLLR 411 >gi|284043252|ref|YP_003393592.1| diaminopimelate decarboxylase [Conexibacter woesei DSM 14684] gi|283947473|gb|ADB50217.1| diaminopimelate decarboxylase [Conexibacter woesei DSM 14684] Length = 423 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 130/389 (33%), Gaps = 31/389 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP +++ + + + + +L A K F ++ L + +S Sbjct: 38 GTPAFVVAEDDICARARAYVEALRARHDDFDVLFASKAFPCTAVYRVLAEEGLVCDVASG 97 Query: 61 YEVMLG-HEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ L F + + K A+ + I+ ++ +++ + A + + Sbjct: 98 GELHLALRGGFDAKRIYLHGNAKSLAELEQAIDAGVGHIVLDSFMDVDRVEQVAAARGVT 157 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168 + + +R+ P V+ + S+ G D + + ++ GL H + Sbjct: 158 QAVLIRVTPGVAGRTHAKISTGQADSKFGFGLDDARLAIERLRGSDSLDLVGLHMHIGSQ 217 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 S + ++ + + + GGG+ + E + + Sbjct: 218 LLSLDAYRPAVEALAA-----LGDFSTYNFGGGLGVAYTAGQQPPAIEEYVEEKVRALHE 272 Query: 229 IY-------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + +EPG ++V N+T +V + N+ V VD + ++ L Sbjct: 273 LIGTGKRLLIEPGRSLVANSTVTLYSVETVKRNVSTWVGVDGGMSDNLRPMLYGSVYEAF 332 Query: 282 YPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + TA V G+ C +GD+ K GD + Y N +NG Sbjct: 333 FADRPELAGSGETAHVAGKHCESGDVIVRDVPLADPKPGDILVTPATGAYGHAMANNYNG 392 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNN 365 I P + +R +Y+D Sbjct: 393 IPRPPVIFCKDGDARVVVRRETYDDLARR 421 >gi|317179814|dbj|BAJ57600.1| carboxynorspermidine decarboxylase [Helicobacter pylori F32] Length = 405 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 137/400 (34%), Positives = 211/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S ++ +P SRLG + + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGIVPSEFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 LKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404 >gi|295696434|ref|YP_003589672.1| diaminopimelate decarboxylase [Bacillus tusciae DSM 2912] gi|295412036|gb|ADG06528.1| diaminopimelate decarboxylase [Bacillus tusciae DSM 2912] Length = 444 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 57/399 (14%), Positives = 110/399 (27%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ L + AG ++ A K F M + + S Sbjct: 30 GTPLYVFDEVLLRETCREFHAAFRKAGLRYQVAYAGKAFCTQAMCRLVEEEGLHLDVVSA 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLH 115 E+ F E + K + + + +L+ + A Q Sbjct: 90 GELHTALTAGFPPEKIHLHGNNKSRDELIYGLRAGIGGFVVDNFYELDLLAELAERQGKR 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 I LR+ P V + ++ G + N+ GL H Sbjct: 150 PNILLRVTPGVEAHTHEYIQTGQQDTKFGFDLASGQAEAAVRRAQRARGVNLVGLHCHIG 209 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + F M++ + + + +++GGG + + Sbjct: 210 SQIFETEGFVLAVERMMEFYARAVNEWGASLRILNVGGGFGIRYVEEDRPLPVEAYIAAI 269 Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 ++++EPG I T TV E + + VD + + Sbjct: 270 ADAVKGEALRRGVAVPEVWVEPGRRIAGPAGTTLYTVGARKEIPGVRRYIAVDGGMADNP 329 Query: 270 PDYLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + + N V G+ C GD+ GD ++ Sbjct: 330 RPIIYQARYEAVVANRAGEPVEELAAVAGKFCETGDMLIWDTPLARAVPGDILAVFGTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + +R + +D Sbjct: 390 YTYSMASNYNRAPRPAVVFVRDGRADVVVRRETLDDLIR 428 >gi|110597928|ref|ZP_01386210.1| diaminopimelate decarboxylase [Chlorobium ferrooxidans DSM 13031] gi|110340505|gb|EAT58991.1| diaminopimelate decarboxylase [Chlorobium ferrooxidans DSM 13031] Length = 409 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 61/386 (15%), Positives = 121/386 (31%), Gaps = 23/386 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L + + + ++K + T + G +S E Sbjct: 21 GTPLFVTSAKSLAGSHRAFEHAFADLPHFTCYSVKANYNLSVIRTFAELGCGCDVNSGGE 80 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + E + + A+ S + ++S+L A +L Sbjct: 81 LFRALTAGVAAEKIIFAGVGKKPEEIAYALKSGVLMLKAESLSELRAINRIAGELELIAN 140 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 + +RINP+V+ + G + + + GL H + Sbjct: 141 VAIRINPNVTAETHPYITTGDSKEKFGIDEAELPAVFALLPQLRNLCLLGLDMHIGSQIF 200 Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + A + F +E++ +GGG T P+ F ++L + Sbjct: 201 DPEYYVAATTKLLDIFSASKEMGFGVEFLDIGGGFPVTYDPLKPATPIAHFAEKLIPMLK 260 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 V + EPG + V N + L T +L + K +VD+ + + L + Sbjct: 261 PAGVTVIFEPGRSFVANASVLLTRILYKKRNHTGKEFFVVDAGMTELIRPALYQAHHEIL 320 Query: 282 YPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + V G C + D F + G+ ++ Y + +NG Sbjct: 321 AVTSHEQSVVADVVGPVCESSDFFARHREIDAAEEGELLAVMSAGAYAAVMGSNYNGRLR 380 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + N + SY N Sbjct: 381 PAEVLVNGSDVKLIRKRESYEQLIQN 406 >gi|329571373|gb|EGG53060.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1467] Length = 436 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + G+K ++ A K F+ ++ L + S Sbjct: 35 GTPLFVYDVAHICAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115 E+ + E + E+ L N TI+ + +++ ++ + Sbjct: 95 GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLTTRNQT 154 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ R++P V + S+ G E + + +V G+ H Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F A ++ + + +++GGG F +++ Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++++EPG +++ T TV E ++ V VD + ++ Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ VK GD ++ Sbjct: 335 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N P + R +Y D Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431 >gi|117924389|ref|YP_865006.1| Orn/DAP/Arg decarboxylase 2 [Magnetococcus sp. MC-1] gi|117608145|gb|ABK43600.1| carboxynorspermidine decarboxylase [Magnetococcus sp. MC-1] Length = 390 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 117/345 (33%), Positives = 176/345 (51%), Gaps = 7/345 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP +++D L N + + +G LLLALK FA F L ++ G +SSL+ Sbjct: 40 VKTPCHILDGATLTKNGEILADVAARSGATLLLALKAFAQPECFKFLKGHLHGVAASSLH 99 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E LG E FGGE H Y AY E+D + + I+FN+ +Q ++K + Q +G+R Sbjct: 100 EARLGQEHFGGELHTYAPAYLPDEMDYIAQHATHIVFNSFNQWRRYKGQLQGSQASVGMR 159 Query: 122 INPSVSYSK--FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 INP S F DP +P SR+G ++ + GL FH C + L Sbjct: 160 INPERSTRGGDFDSCDPCQPGSRMGVPLALFEADAMEGIEGLHFHTLCMQG-PAALARTL 218 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + +E FGH +++WI+ GGG T +Y + Q +K+F K+ + + LEPG +V Sbjct: 219 EAVEARFGHVFHKLKWINFGGGHLITHPNYDRERLIQLIKDFRAKHGLAVTLEPGAGVVF 278 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 NT + V DI VI+D S AHV D L TI+ +T + G Sbjct: 279 NTDVVVAQVQDIIHTATPNVILDLSAAAHVTDVLDLGWRPTIWGAGREGEYAHTYRLGGH 338 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 SCL+GD FG + F +P++IG ++ F D+A Y + + FNG+ +P Sbjct: 339 SCLSGDYFGLYSFPEPLQIGQKLVFLDMAHYTLVKMTTFNGLALP 383 >gi|163869282|ref|YP_001610538.1| hypothetical protein Btr_2591 [Bartonella tribocorum CIP 105476] gi|161018985|emb|CAK02543.1| Diaminopimelate decarboxylase [Bartonella tribocorum CIP 105476] Length = 424 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 111/387 (28%), Gaps = 26/387 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L+ + + A+K + + L G S Sbjct: 25 VGTPFYCYSANALVTRFKDYQKAFQGMPTLIAYAVKANSNQAILRLLAANGAGADVVSEG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ Y+ K A+ N + +L + +A L K Sbjct: 85 ELRRALAVGIPAHRIVYSGVGKTVREIDFALSQNIYCFNVESEPELEQLSQRAVALSKTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 LRINP V + ++ G E+ K V G+ H + Sbjct: 145 RVSLRINPDVDAKTHKKITTGKSENKFGIPLFLAREAYKKAASLPGLQVCGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221 F I I I +GGG+ D+ +K+ Sbjct: 205 CDLKPFEEAFLLIADCVRQLWSDGCAITHIDIGGGLGIAYGCEQHTLPSPFDYAALVKKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + I +EPG +IV L T+VL + + +N VIVD+++ + L Sbjct: 265 IAPLGIDIVVEPGRSIVGQAGVLVTSVLYLKKGQGRNFVIVDAAMNDLMRPTLYDAWQNV 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + A + G C GD + GD ++ Y + +N Sbjct: 325 VLVKQAAKDAPLIRADIVGSVCETGDYLALDRCLPILAPGDLLAITQAGAYGAVMASTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDY 362 + + Y Sbjct: 385 SRLLIPEVLVQDTRYAVIRPRLDYAQL 411 >gi|307594424|ref|YP_003900741.1| diaminopimelate decarboxylase [Vulcanisaeta distributa DSM 14429] gi|307549625|gb|ADN49690.1| diaminopimelate decarboxylase [Vulcanisaeta distributa DSM 14429] Length = 400 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 59/377 (15%), Positives = 110/377 (29%), Gaps = 19/377 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP + D ++ N G ++L ++K + L + G ++S E Sbjct: 20 GTPLIVYDLGRVEENYRVIKEA---TGARVLYSIKANPNLAILTFLRKLGSGADAASPGE 76 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + L F Y A++ + F++ + + K Sbjct: 77 IFLALKAGFEPGNILYTGAFRSINDIKYGIDAGVIFNFDSRREFERALSLGYKPKTAF-F 135 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLC 174 R++ S+ G D +E+ + G+ Sbjct: 136 RVDLGYGRGFAPGVVLAGEESKFGMFLDDAVEAYRLARDVGVGEFGIHAMMGSNVLDADY 195 Query: 175 FSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 F + + +++ +I + +GGG + RL + +++ Sbjct: 196 FIKIAELLKEYAEAIEDRVGIRIRYFDMGGGFGIPYRPDEKPLDLGRLGVLRNFFPGELW 255 Query: 231 LEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP--NTGP 287 +EPG IV N L T V ++ + V VD + + L I N Sbjct: 256 VEPGRFIVGNAGYLVTRVTEVKRKGGRTFVGVDVGMNVLIRPMLYGAYHHIITCSNNEER 315 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 V G C D V+ GD + + Y + +NG P V Sbjct: 316 EVVDVVGPICENTDKLAIGRELPRVREGDLLIILNAGAYVYSMSGNYNGRPRPAEVVVYG 375 Query: 348 DGTIKAIREFSYNDYYN 364 + A S Sbjct: 376 NEYGIARFRESLESLVA 392 >gi|300812246|ref|ZP_07092684.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496760|gb|EFK31844.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|325686042|gb|EGD28100.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 436 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 127/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP + D K+ + + + GV ++ A K F+ ++ +N+ T S Sbjct: 31 QTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLAIYQVINEEGGHTDVVSG 90 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + +++ K + II + +++ + Sbjct: 91 GELWTAMKAGFPMDKVSFHGNNKSRAELEMAVDQGVGVIILDNFHEIDLLSQILEEKDAS 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 K+ LR+ P +S + S+ G + + + + G+ H Sbjct: 151 SKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALELVLANPRMKMAGIHAHIG 210 Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----- 217 + F + + + + +++GGG D + Sbjct: 211 SQIFDVRGFVGCADKLCQLASAWKEKYGYETDILNVGGGFGIHYTDQDQPLPAEEFVRAI 270 Query: 218 ---LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 +K ++ + I++EPG +IV TV + V + ++ Sbjct: 271 VKEVKSKCQENNLKLPAIWIEPGRSIVGPAGFSLYTVGSRKDLPGYPSYVALDGGMGDNI 330 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + + + G+ C +GDI + + GD ++ Sbjct: 331 RPALYQAEYSAVVADRPQAEDEERVNLVGKYCESGDILIKSCPLPKTEPGDVVALLSTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + I+ SY+D N Sbjct: 391 YGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAN 430 >gi|222151302|ref|YP_002560458.1| diaminopimelate decarboxylase [Macrococcus caseolyticus JCSC5402] gi|222120427|dbj|BAH17762.1| diaminopimelate decarboxylase [Macrococcus caseolyticus JCSC5402] Length = 423 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 68/396 (17%), Positives = 133/396 (33%), Gaps = 33/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D+ ++ N K +G + A K F + +F+ +++ G S Sbjct: 25 GTPLFIYDEDEIRNQCRRFHRALKASGLNYTISYASKAFTSVQLFNLMHEEDMGLDVVSE 84 Query: 61 YEVMLGHEK--FGGETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + + H + D EI + + + +++ ++ + D A L + Sbjct: 85 GELYTALKSKVSASKMHFHGNNKTDREIKYAIESGVEYFVIDSLDEIERINDIAHSLGQT 144 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRINP V + S+ G E + + G+ FH Sbjct: 145 VKAVLRINPGVEAHTHEFIQTGQEDSKFGLSIRHGLAIEGVRQIEAASHIEFKGVHFHIG 204 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRL 218 + ++ + I+ +++GGG + + L Sbjct: 205 SQIFESTGTIKTIELVINWLTQHKIDIDILNIGGGFSIKYTSEDISYPIEEGIKRIAETL 264 Query: 219 KEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273 K +K+S I LEPG +IV V + E V + H+ L Sbjct: 265 KNECKKHSYPVPEISLEPGRSIVGEAGITVYEVGTVKEIPDTNCYVSIDGGMSDHIRTAL 324 Query: 274 LYQESATIYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNIN 329 + + + V G+ C +GDI +K GD + + Y+ + Sbjct: 325 YNAKYELLLADRYEIHDKEVTVAGKLCESGDIIMRNIMLPSSIKRGDLLVVKATGAYHYS 384 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P + D + I+ S N Sbjct: 385 MSSNYNQMLKPAVVFVTKDNVREVIKRQSLEHLIAN 420 >gi|315586009|gb|ADU40390.1| carboxynorspermidine decarboxylase [Helicobacter pylori 35A] Length = 405 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 133/400 (33%), Positives = 206/400 (51%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N + + +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVCQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E L E+FGG E Y+ A+K+ E+ +L +IIFN+ Q +KD +K Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEMSTILPLATSIIFNSFYQYATYKDMVLGKNK 126 Query: 117 K----------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 + +GLRINP S + +P SRLG + + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSEFEKGVREHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVKNDREIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F F+ P+K GD+I F+D+ Sbjct: 306 LKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDAPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404 >gi|189095960|pdb|2QGH|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase From Helicobacter Pylori Complexed With L-Lysine Length = 396 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 71/381 (18%), Positives = 125/381 (32%), Gaps = 21/381 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 10 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 69 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 70 IQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 129 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 130 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 189 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 190 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 249 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + I EPG +IV + L T VL + K VIVD+ + + L + + A Sbjct: 250 LDLTIICEPGRSIVAESGELITQVLY-EKKNKRFVIVDAGMNDFLRPSLYHAKHAIRVIT 308 Query: 285 TGPY-TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 V G C + D F + ++ GD+I+ E V Y + + +N Sbjct: 309 PSEISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPKLLEL 368 Query: 344 VKNVDGTIKAIREFSYNDYYN 364 D + + D + Sbjct: 369 AL-EDKIRVIRKREALEDLWR 388 >gi|317013735|gb|ADU81171.1| diaminopimelate decarboxylase [Helicobacter pylori Gambia94/24] Length = 405 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 124/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLANLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYKIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLSAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 S + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLDPITEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K V+VD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD+++ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKDANLPELEPGDKLAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|313507304|pdb|3C5Q|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase (I148l Mutant) From Helicobacter Pylori Complexed With L-Lysine Length = 425 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 32 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 91 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 92 IQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 151 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 152 ISIRINPNIDAKTHPYLSTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 211 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 212 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 271 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 272 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 331 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD+I+ E V Y + + +N Sbjct: 332 TPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 391 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 392 LLELALEDHKIRVIRKREALEDLWR 416 >gi|288555982|ref|YP_003427917.1| diaminopimelate decarboxylase [Bacillus pseudofirmus OF4] gi|288547142|gb|ADC51025.1| diaminopimelate decarboxylase [Bacillus pseudofirmus OF4] Length = 440 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 64/399 (16%), Positives = 122/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + + + GV ++ A K F+ MF ++ S Sbjct: 30 GTPLFVYDVALIKERAEQFQEAFREEGVNYQVAYASKAFSCIAMFQLADELGLSLDVVSG 89 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ E ++ K + S ++ + +L + + Sbjct: 90 GELYTAIQAGVPMERIHFHGNNKSLAELEMAVESGIGCVVVDNFYELKQLGHICARHDVK 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK-----DKIE----SEIKNVNGLMFHNN 166 I LRI P V + S+ G + I+ N+ G+ H Sbjct: 150 MDILLRITPGVEAHTHDYISTGQEDSKFGFDLESGQVDQAIQLSLLDPHINLLGIHSHIG 209 Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + + + + IEK ++LGGG + Sbjct: 210 SQIFETSGFVMAVEKIFEFIEKWREELGFTPSVLNLGGGFGIRYIEGDTPLPVGEYVRKM 269 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 +KE + + ++I ++EPG ++V + T ++ E VD + ++ Sbjct: 270 VHVIKEKAAAHQMEIPEIWIEPGRSLVGDAGTTLYSIGSRKEIPNVRHYLSVDGGMSDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E I T + G+ C +GD+ D ++ Sbjct: 330 RPALYQAEYEGILANRADEETTETFSIAGKCCESGDMLIWDLPLPKASHEDVLAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + I+ SY D Sbjct: 390 YGYSMANNYNRIPRPPVVFVEKGEAQLVIQRESYEDLVR 428 >gi|226311991|ref|YP_002771885.1| diaminopimelate decarboxylase [Brevibacillus brevis NBRC 100599] gi|226094939|dbj|BAH43381.1| diaminopimelate decarboxylase [Brevibacillus brevis NBRC 100599] Length = 440 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 64/400 (16%), Positives = 129/400 (32%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+Q++ + N G ++ A K F M + + S Sbjct: 30 GTPLYVYDEQQIRTKCREFVNAFHNTGFSFQVAYASKAFCTMAMCKLVEEEGLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K D I A+ + + + +L+ A++ ++K Sbjct: 90 GELYTALQAGFPVERIHFHGNNKSYDELIMALDAKIGCFVVDNFYELHMLAQLAEERNEK 149 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIE----SEIKNVNGLMFHNN 166 I LR+ P V + S+ G + I+ S ++ G+ H Sbjct: 150 VAILLRVTPGVEAHTHEYISTGQIDSKFGFDVQNGQALEAIQFSHESNHLHLLGVHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + F +K + + G ++ E +++GGG + + + Sbjct: 210 SQIFETEGFLVAVKRLTELLGEAKEKLGFLPEVLNVGGGFGIRYVEGDTPQPAETYIKAI 269 Query: 223 EKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 Q I++EPG +I+ + T + + + ++ Sbjct: 270 TDIVRQELTALAIPLPEIWIEPGRSIIGDAGTTLYRIGSHKNIPNVRKYIAVDGGMTDNL 329 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E N + G+ C +GD+ + GD ++ Sbjct: 330 RPALYDAEYEAAIANKMNAPATEVVSIAGKCCESGDMLIWDVKLPEAQAGDILAVPSTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + +R +Y + N Sbjct: 390 YGYSMANNYNRIARPAVIFVKDGEAEVVVRRETYAEVVGN 429 >gi|46580970|ref|YP_011778.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|46450390|gb|AAS97038.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|311234658|gb|ADP87512.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris RCH1] Length = 421 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 53/389 (13%), Positives = 107/389 (27%), Gaps = 29/389 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ + L + + G ++ + K + + + + + S E Sbjct: 28 GSPLYVYSEAILRQRCREMKALSSHPGFRVNYSAKANSNLALLHIIREEGLVVDAMSPGE 87 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIGL 120 + M F + Y E + ++ +++SQL+ + + ++ + Sbjct: 88 LFMNLRAGFSPDKILYVCNNVSAEELGNAVSHGLLVSVDSLSQLDLYGEV--NPGGRVMV 145 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENKSFLCFS 176 R NP + ++ G E N+ + + + S Sbjct: 146 RFNPGIGAGHHKKVVTAGKETKFGVDPASIDEVRTILARHNLTLAGINQHIGSLFLEPES 205 Query: 177 A-MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE------------FSE 223 +E I GGG Y + Sbjct: 206 YVEAARFLLTLAERFDDVEVIDFGGGFGIPYHKYDNQPRLDLTAMGAQFDDLISGWAQRR 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 Y + +EPG +V L +V + V D + Sbjct: 266 GYRGRFLVEPGRYVVAECGLLLGSVHSVKSNGANRYVGTDLGFNVLARPVMYDAHHDIEV 325 Query: 283 PNTGPYTAM------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + V G C +GDI PV+ GD + D Y + +N Sbjct: 326 YREDGAPSDLLLPQTVVGNICESGDIIARNRPLPPVEEGDILGVLDAGAYGYVMSSSYNQ 385 Query: 337 INMPTIAVKNVDGT-IKAIREFSYNDYYN 364 P + +++G R + +D Sbjct: 386 RMRPAEVLIDLEGRPRLVRRRETLDDLVA 414 >gi|15614107|ref|NP_242410.1| diaminopimelate decarboxylase [Bacillus halodurans C-125] gi|13431434|sp|Q9KCM5|DCDA_BACHD RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|10174161|dbj|BAB05263.1| diaminopimelate decarboxylase [Bacillus halodurans C-125] Length = 439 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 58/401 (14%), Positives = 120/401 (29%), Gaps = 37/401 (9%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSS 58 + TP ++ D + + GV+ + A K F+ MF + Sbjct: 28 LYGTPLFVYDVALIRERAKDFKQAFADEGVQAQVAYASKAFSCIAMFQLAEELGLSLDVV 87 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK-- 113 S E+ E ++ K + + + + +L+ D ++ Sbjct: 88 SGGELYTAQQAGVSMERIHFHGNNKSRAEIEMAVEAGIGCFVVDNFYELDLLADICEQKR 147 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFH 164 I LRI P V + S+ G K + + ++ G+ H Sbjct: 148 ATANILLRITPGVEAHTHDYISTGQEDSKFGFDLVSGQATLAVKKALAVDSIHLLGVHSH 207 Query: 165 NNCEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD------- 213 + + + +++ + ++LGGG + Sbjct: 208 IGSQIFETTGFVMAVEKIFEHLVTWREDHGFEPSVLNLGGGFGIRYIEGDTPRPVGDYVK 267 Query: 214 -FCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEA 267 + +K+ ++ + + ++EPG ++V + T T+ E VD + Sbjct: 268 EMIRAVKQQIAEHEMSMPEIWIEPGRSLVGDAGTTLYTIGSRKEIPNVRHYLSVDGGMSD 327 Query: 268 HVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 ++ L E N V G+ C +GD+ D ++ Sbjct: 328 NLRPALYQAEYEGALANRVNEQPVGMFSVAGKCCESGDMLIWDLPLPEANHEDILAVFCT 387 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + I+ Y D Sbjct: 388 GAYGYSMANNYNRIPRPPVVFVEDGDAQLVIQRERYEDLVR 428 >gi|315121839|ref|YP_004062328.1| diaminopimelate decarboxylase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495241|gb|ADR51840.1| diaminopimelate decarboxylase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 422 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 58/392 (14%), Positives = 117/392 (29%), Gaps = 26/392 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP+Y + N T + A+K + + TL + G S Sbjct: 25 VQTPFYCYATAAIEQNYLTFSRALDGMNTMICYAVKANSNQAVIQTLARLGSGLDIVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF----KDKAQKLHK 116 E+ + E ++ K + FN S+ + + Sbjct: 85 ELHRALSAQVPAEKIVFSGVGKTISEMDLALQTGIYCFNIESESELITLNQRAISLGKIA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 I R+NP V+ + + + G ++G+ H + Sbjct: 145 PISFRVNPDVNANTHKKISTGKKEDKFGIPIHQIHSLYDYAKDLPGIKISGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221 F K + + + I+ I +GGG+ T D+ + ++ Sbjct: 205 NQIESFCQAFKLLRETTLKLRSDGHNIQHIDVGGGLGITYCHSNPPPPSPSDYASLIHKY 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 +I LEPG +V + L + V+ + ++ + I+ D ++ + L Sbjct: 265 FGDLQCKIILEPGRFLVADAGILVSKVISVKKSTDKIFIILDVAMNDFMRPTLYDAYHEI 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 Y ++ A + G C GD + GD + E Y + +N Sbjct: 325 KYISSPEEGRLHVQADIVGPICETGDFIALNRTIPLPQAGDILYIEKAGAYGAVQSGTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + S+ S Sbjct: 385 SRRLIPEVMVKDSQFHIIRPRMSFQKLIEMDS 416 >gi|299142703|ref|ZP_07035833.1| carboxynorspermidine decarboxylase [Prevotella oris C735] gi|298575918|gb|EFI47794.1| carboxynorspermidine decarboxylase [Prevotella oris C735] Length = 365 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 109/365 (29%), Positives = 182/365 (49%), Gaps = 13/365 (3%) Query: 14 LLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGE 73 + NL+ + + A V+++LA K +A W F +Y+ TT+SSL E L E+FG + Sbjct: 1 MRRNLNLIANVAREADVEIILAFKAYALWKTFPIFREYIHATTASSLSEARLALEEFGSK 60 Query: 74 THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRINPSVSYSKF 131 H ++ AY D EID + + FN+++Q ++ ++ + GLR+NP S Sbjct: 61 AHTFSPAYTDDEIDEIARCSSHLQFNSLTQYARYHERVRKVNPTISYGLRVNPEYSEVGT 120 Query: 132 ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT 191 L +P P +R G E ++ G H +CE+ F LK+IE +F + Sbjct: 121 DLYNPCAPGTRFGISADKMPEMLPDDIEGFHCHCHCESG-ADVFERTLKHIENKFSRWFP 179 Query: 192 QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD 250 Q++WI+ GGG T DY L++F +Y ++ LEPG A T L + V+D Sbjct: 180 QLKWINFGGGHLMTRHDYDTLLLVDTLQKFHMRYPWLKVILEPGSAFAWQTGPLVSQVVD 239 Query: 251 ISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT--------GPYTAMVCGRSCLAGD 301 + E+ + + S H+PD L + + + PY + G SCL+GD Sbjct: 240 VVEDHGIKTAILNVSFTCHMPDCLEMPYNPVVRGSKYIEADDKSSPYIYRLGGNSCLSGD 299 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 G + F+ + +G+ + FED+ Y + N FNGI+ P I + +DGT++ +R++ Y D Sbjct: 300 FMGYWKFDHALLVGENVIFEDMLHYTTVKTNMFNGISHPAIGLAKLDGTLEVLRKYGYED 359 Query: 362 YYNNL 366 Y + + Sbjct: 360 YRDRM 364 >gi|210134488|ref|YP_002300927.1| diaminopimelate decarboxylase [Helicobacter pylori P12] gi|210132456|gb|ACJ07447.1| diaminopimelate decarboxylase [Helicobacter pylori P12] Length = 405 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 124/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLDPVSVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNSLQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K V+VD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD+I+ E V Y + + +N Sbjct: 312 TPSKGRKVSPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|319899468|ref|YP_004159565.1| Diaminopimelate decarboxylase [Bartonella clarridgeiae 73] gi|319403436|emb|CBI77004.1| Diaminopimelate decarboxylase [Bartonella clarridgeiae 73] Length = 424 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 66/389 (16%), Positives = 116/389 (29%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+Y + L+ N + ++ + A+K + + L + G S Sbjct: 25 IGTPFYCYSARALITNFENYQNAFRDMPYLIAYAVKANSNQAILRLLARSGAGADIVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ Y+ K + D + +L + +A L Sbjct: 85 ELRRALSAGIPAHKIVYSGVGKTIKEIDFALAQDIRCFNVESEPELEQLSARAVALSTTA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 LRINP V + ++ G E K V G+ H + Sbjct: 145 RISLRINPDVDAKTHKKITTGKSENKFGIPLSSAREVYKKAAQLPGLYVCGVDIHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221 + F I + +GGG+ + D+ +++ Sbjct: 205 CNLKPFENAFIITADFVRQLWGDGCAITHVDIGGGLGISYGAEHYSLPSPFDYAALVRKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + I LEPG +IV L T+V+++ +N IVD+++ + L Sbjct: 265 IAPLGINIILEPGRSIVGEAGILVTSVINLKRGKERNFFIVDAAMNDFIRPTLYEAWQNV 324 Query: 281 IYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P A V G C GD G + GD ++ Y N +N Sbjct: 325 LLVKEAPMDALLINADVVGPICETGDYLGLNRSLPILSAGDLLAVTGAGAYGAVMSNTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + Y N Sbjct: 385 SRLLIPEVLVQGARYAVVRPRLDYAQLIN 413 >gi|296135146|ref|YP_003642388.1| diaminopimelate decarboxylase [Thiomonas intermedia K12] gi|295795268|gb|ADG30058.1| diaminopimelate decarboxylase [Thiomonas intermedia K12] Length = 430 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 118/389 (30%), Gaps = 28/389 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLL--LALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ + + + + V + A+K + + L + G S Sbjct: 37 GTPTYVYSRASIEEAAQRYSQAAQASPVHVALRYAVKANSNLAVLQLLARLGWGFDIVSA 96 Query: 61 YEVMLGHEKFG--GETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ G G+ V D A+ + + S+L AQ K Sbjct: 97 GELKRVLAAGGEAGKVVFSGVGKSADDMRFALDVGVECFNVESPSELAALNRVAQAAGKV 156 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168 LR+NP V ++ G + E + G+ H + Sbjct: 157 ARVALRVNPDVDAGTHPYISTGLKTNKFGISQDQAAQLALQTAQFEQVQLVGIACHIGSQ 216 Query: 169 NKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + + L ++ ++ +IE I LGGG+ D + L + Sbjct: 217 ITTVEPYLDALDKVLDLVEQMERKGAKIEHIDLGGGLGIRYTDETPPTPQEWLSPLLARI 276 Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES 278 I +EPG +IV N L T L + +K+ +VD+ + + L E Sbjct: 277 SARGFGHRTIVIEPGRSIVGNAGVLLTRTLFLKSTPVKHFAVVDAGMNDLIRPALYSAEQ 336 Query: 279 ATIYPNTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 A + + G C + D + GD ++ Y + + +N Sbjct: 337 AVVPAEQREGSALKYDIVGPVCESADWLARDRALV-LAEGDLLAILSSGAYGMVMASNYN 395 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 P + + + Y Sbjct: 396 SRGRPAEVMVDGATATLIRPRETPEQLYA 424 >gi|325125935|gb|ADY85265.1| Diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 436 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 127/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP + D K+ + + + GV ++ A K F+ ++ +N+ T S Sbjct: 31 QTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLAIYQVINEEGGHTDVVSG 90 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + +++ K V II + +++ + Sbjct: 91 GELWTAMKAGFPMDKVSFHGNNKSRAELELAVDQGVGVIILDNFHEIDLLSQILEEKDAS 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 K+ LR+ P +S + S+ G + + + + G+ H Sbjct: 151 SKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALELVLSNPRMKMAGIHAHIG 210 Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----- 217 + F + + + + +++GGG D + Sbjct: 211 SQIFDVRGFVGCADKLCQLASAWKEKYGYETDILNVGGGFGIHYTDQDQPLPAEEFVRAI 270 Query: 218 ---LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 +K ++ + I++EPG +IV TV + V + ++ Sbjct: 271 VKEVKSKCQENNLKLPAIWIEPGRSIVGPAGFSLYTVGSRKDLPDYPSYVALDGGMGDNI 330 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + + + G+ C +GDI + + GD ++ Sbjct: 331 RPALYQAEYSAVVADRPQAEDEERVNLVGKYCESGDILIKSCPLPKTEPGDVVALLSTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + I+ SY+D N Sbjct: 391 YGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAN 430 >gi|121603580|ref|YP_980909.1| diaminopimelate decarboxylase [Polaromonas naphthalenivorans CJ2] gi|120592549|gb|ABM35988.1| diaminopimelate decarboxylase [Polaromonas naphthalenivorans CJ2] Length = 428 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 57/390 (14%), Positives = 120/390 (30%), Gaps = 29/390 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ K +L+ L + + ++ A+K ++ + + G S E Sbjct: 34 GTPLFIYSKTAMLSALASYQRGFEGRDAQICYAMKANSSLAVLQVFARADCGFDIVSGGE 93 Query: 63 VMLGHEKFG--GETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKK 117 + G + V + A+ + + ++L+ + A KL Sbjct: 94 LERVQAAGGDLKKVIFSGVGKTRAEMCQALAAGIGCFNVESEAELDVLSEVAVAMKLRAP 153 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + +R+NP+V ++ G +D + V G+ H + Sbjct: 154 VSIRVNPNVDPKTHPYISTGLKGNKFGVAHEDALRIYQHAASLEGLKVVGIDCHIGSQIT 213 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + + + I GGG+ + L Sbjct: 214 EVTPYLDAMDRVLDLVAAIEAAGIALAHIDFGGGLGINYSADDMPPEADALWRQLLAKLD 273 Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 ++ +EPG ++V N T VL + KN I+D+++ + A Sbjct: 274 ARGYGGKKLMIEPGRSLVGNAGICITEVLYLKPGEQKNFCIIDAAMNDLPRPAMYQAFHA 333 Query: 280 TIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C +GD G V GD+++ Y ++ + + Sbjct: 334 IVPVERAATETAGVIYDVVGPVCESGDWIGRDRIL-DVAAGDQLAVMSAGAYCMSMASNY 392 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + D + D + Sbjct: 393 NTRGRAAELLVDGDLARLIRARETAADTFR 422 >gi|308184093|ref|YP_003928226.1| diaminopimelate decarboxylase [Helicobacter pylori SJM180] gi|308060013|gb|ADO01909.1| diaminopimelate decarboxylase [Helicobacter pylori SJM180] Length = 405 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD+I+ E V Y + + +N Sbjct: 312 TPSKGRKVSPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|315023548|gb|EFT36552.1| diaminopimelate decarboxylase [Riemerella anatipestifer RA-YM] Length = 400 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 118/385 (30%), Gaps = 26/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + + + + A K + + + S+ E Sbjct: 15 GTPVYVYDAESIKQQYEKLTSSFSE-KTRFFYAAKALTNINILKYVEKLGASLDCVSINE 73 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V LG F + + D + + I + +S L +F K I + Sbjct: 74 VKLGLKAGFSKDRILFTPNSVDISEVEEAVELGVHINIDNISILEQFGTK-FGGSYPIFV 132 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFLC 174 R+NP + S+ G E NV GL H E K Sbjct: 133 RVNPHIFAGGNYKISTGHIDSKFGISIHQMRHIERVAKTTGLNVEGLHMHTGSEIKDPDV 192 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224 F L+ + E +++I +G G ++ ++ + L + EK Sbjct: 193 FLQGLEIM-FELAEHFPNLKYIDMGSGFKIPYQEGDMETDVKSLGKKVEKALAKFNEEQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLL--YQESATI 281 +Q++ EPG+ +V + I + V V+S + Y + + Sbjct: 252 KELQLWFEPGKFLVGKSGHFLVKSNVIKQTTATVFVGVNSGFNHLIRPMFYDSYHKIENL 311 Query: 282 YPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 GP V G C D F V+ GD + F + Y + FN P Sbjct: 312 SNPNGPERIYTVVGNICET-DTFAWDRKINEVREGDVLVFRNAGAYGFEMSSNFNSRLKP 370 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D N Sbjct: 371 AEVLWLDGKAHLIRKRDEFEDLLRN 395 >gi|315586283|gb|ADU40664.1| diaminopimelate decarboxylase [Helicobacter pylori 35A] Length = 405 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ QR+ + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396 >gi|182435976|ref|YP_001823695.1| putative diaminopimelate decarboxylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776601|ref|ZP_08235866.1| diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1] gi|178464492|dbj|BAG19012.1| putative diaminopimelate decarboxylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656934|gb|EGE41780.1| diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1] Length = 463 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 116/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D+ + A K F + + L + S E Sbjct: 63 GTPAYFLDESDFRARCRAWSDAF-GPDADVFYAGKAFLSRAVVRWLKEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E A++ K + I+ ++ ++ + AQ+ + Sbjct: 122 LTTALDAGMPAERIAFHGNNKTVAEIERAVEAGVGRIVLDSFQEIVRVAHIAQRHGVRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 +R+ V + G D + + ++ G+ H + Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIALADGQAAEAVRRALSLDGLDLIGVHSHIGSQ 241 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +++ + + ++ I LGGG+ + + Sbjct: 242 IFDMAGFEVSARRVVQLLAEIRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALSD 301 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +I +EPG AIV T V I + V VD + ++ Sbjct: 302 IVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + + P V G+ C +GDI + F + GD I+ Y Sbjct: 362 ALYDAEYSVALVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVRDGEARVIVRRETEEDLLR 459 >gi|116514245|ref|YP_813151.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093560|gb|ABJ58713.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 436 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 127/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP + D K+ + + + GV ++ A K F+ ++ +N+ T S Sbjct: 31 QTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLAIYQVINEEGGHTDVVSG 90 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + +++ K V II + +++ + Sbjct: 91 GELWTAMKAGFPMDKVSFHGNNKSRAELELAVDQGVGVIILDNFHEIDLLSQILEEKDAS 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 K+ LR+ P +S + S+ G + + + + G+ H Sbjct: 151 SKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALELVLSNPRMKMAGIHAHIG 210 Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----- 217 + F + + + + +++GGG D + Sbjct: 211 SQIFDVRGFVGCADKLCQLASAWKEKYGYETDILNVGGGFGIHYTDQDQPLPAEEFVRAI 270 Query: 218 ---LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 +K ++ + I++EPG +IV TV + V + ++ Sbjct: 271 VKEVKSKCQENNLKLPAIWIEPGRSIVGPAGFSLYTVGSRKDLPGYPSYVALDGGMGDNI 330 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + + + G+ C +GDI + + GD ++ Sbjct: 331 RPALYQAEYSAVVADRPQAEDEERVNLVGKYCESGDILIKSCPLPKTEPGDVVALLSTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + I+ SY+D N Sbjct: 391 YGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAN 430 >gi|217033418|ref|ZP_03438848.1| hypothetical protein HP9810_1g32 [Helicobacter pylori 98-10] gi|216944123|gb|EEC23551.1| hypothetical protein HP9810_1g32 [Helicobacter pylori 98-10] Length = 405 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IHRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224 + I K + + +GGGI + ++ + D+ QR+ + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKIYDYAQRILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396 >gi|297379243|gb|ADI34130.1| carboxynorspermidine decarboxylase [Helicobacter pylori v225d] Length = 405 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 137/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCTSGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E++A+L ++IFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEVCVYSPAFKEAEMNAILPLATSVIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSEFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ +EW++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMEWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L I Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPNI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G + + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 LKISVENDEELIEVERGENQGALSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404 >gi|194336708|ref|YP_002018502.1| diaminopimelate decarboxylase [Pelodictyon phaeoclathratiforme BU-1] gi|194309185|gb|ACF43885.1| diaminopimelate decarboxylase [Pelodictyon phaeoclathratiforme BU-1] Length = 417 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 128/386 (33%), Gaps = 23/386 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ ++ ++ + + ++K + TL + G +S E Sbjct: 29 GTPLFVTSRRSVIESYKAFECAFEALPHFTCYSVKANYNLSVIRTLAELGCGCDVNSAGE 88 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + + + K + A+ S + ++S+L A +L Sbjct: 89 LYRALQSGVSPDKIIFAGVGKREDEIVYALQSGVLMLKAESLSELRAIDRIAGELGLTAS 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVN--GLMFHNNCENK 170 + +RINP+V+ + G + + S + N+ GL H + Sbjct: 149 VAIRINPNVTAETHPYITTGDSKEKFGIDEAELSTVFSLLSRLPNIKLVGLDMHIGSQIF 208 Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + A + F IE++ +GGG T P++ F ++L Sbjct: 209 DPEYYVAATVKLLAIFKASRELGFAIEFLDIGGGFPVTYDPLKPATPIEHFAEKLVPMLL 268 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDI--SENIKNLVIVDSSVEAHVPDYLLYQESAT- 280 V++ EPG +V N + L T +L + K +VD+ + + L Sbjct: 269 PLDVKVIFEPGRYLVANASVLLTRILYKKSNHTGKQFFVVDAGMTELIRPALYQSHHEVQ 328 Query: 281 -IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + A V G C + D F + G+ ++ Y + +NG Sbjct: 329 SVTFHEEEVIADVVGPICESSDFFARHRAIGAAEEGELLAVMSAGAYAAVMSSNYNGRLR 388 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + N + + N Sbjct: 389 PAEVLVNGSEVKLVRKRETLEQLVQN 414 >gi|327440840|dbj|BAK17205.1| diaminopimelate decarboxylase [Solibacillus silvestris StLB046] Length = 439 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 69/400 (17%), Positives = 135/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + + + GVK + A K FA + Q S Sbjct: 30 GTPLFVYDTALIRKRSRGFIDTFEQLGVKAQVAYASKAFACVAAYQLAAQENLSLDVVSG 89 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F + ++ K + I+ + +++ K+ AQ+ ++K Sbjct: 90 GELYTAIKAGFPADRIHFHGNNKSIAELELAFETGIGCIVVDNFYEISLIKEIAQQKNQK 149 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LR+ P V + S+ G E K + E + GL H Sbjct: 150 MKILLRVTPGVEAHTHDFITTGQADSKFGFDLNNGQADEAFKQVVNDEHIELLGLHCHIG 209 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQR 217 + FS +++ + + ++LGGG P + Sbjct: 210 SQIFETEGFSLAAGKVMQKMGAWKEQHGFVAQVLNLGGGFGIRYTEEDKPLEPHEYVADM 269 Query: 218 LKEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 ++ ++ +I++EPG ++V + T T+ N+++ + VD + ++ Sbjct: 270 IRTVQDESKKLNLAMPEIWIEPGRSLVGDAGTSLYTIGSQKTVPNVRDYIAVDGGMSDNI 329 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N T V G+ C +GD + GD ++ Sbjct: 330 RPALYDAKYEAIIANKANDPKTSTYTVAGKLCESGDKLIIDASLQNAHTGDILAMFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + P + AI+ SY D N Sbjct: 390 YGYSMASNYNRVPRPAVVFVENGEHQLAIKRESYEDLVVN 429 >gi|49474787|ref|YP_032829.1| diaminopimelate decarboxylase [Bartonella quintana str. Toulouse] gi|49240291|emb|CAF26766.1| Diaminopimelate decarboxylase [Bartonella quintana str. Toulouse] Length = 424 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 116/388 (29%), Gaps = 26/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L+ ++ + A+K + + L G S Sbjct: 25 VGTPFYCYSANALVTRFKDYQNAFRDMPSLIAYAVKANSNQAVLQLLAANGAGADVVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKF--KDKAQKLHK 116 E+ Y+ K + D + +L + + A Sbjct: 85 ELRRALAAGIPAHCIVYSGVGKTVKEIDFALAHDICCFNVESEPELEQLSARAVAFSKTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 +I LRINP V + ++ G K + +V G+ H + Sbjct: 145 RISLRINPDVDAKTHKKITTGKYENKFGIPLSLAWDVYKKAAQLPGIHVCGVDMHIGSQI 204 Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221 K F ++ + + + + +GGG+ D+ +K Sbjct: 205 CDLKPFEDAFLIVADFVRHLSSSGYALTHVDIGGGLGIAYGHEQHSVPSLFDYAALVKRH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 ++I +EPG +I+ L T+V+ + +N V+VD+++ + L Sbjct: 265 IAPLGLKIIVEPGRSIIGEAGVLVTSVIYLKRGEGRNFVVVDAAMNDLIRPTLYDAWQNV 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P A + G C GD + GD ++ Y+ + +N Sbjct: 325 LLVKQAPEDASFIRADIVGSVCETGDYLALDRRVPILAAGDLLAITGAGAYSAVMASTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + Y Sbjct: 385 SRLLVPEVLVQDTRYAIIRPRLDYAQLI 412 >gi|239944279|ref|ZP_04696216.1| putative diaminopimelate decarboxylase [Streptomyces roseosporus NRRL 15998] gi|239990734|ref|ZP_04711398.1| putative diaminopimelate decarboxylase [Streptomyces roseosporus NRRL 11379] gi|291447747|ref|ZP_06587137.1| diaminopimelate decarboxylase [Streptomyces roseosporus NRRL 15998] gi|291350694|gb|EFE77598.1| diaminopimelate decarboxylase [Streptomyces roseosporus NRRL 15998] Length = 463 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 115/398 (28%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D+ + A K F + + L + S E Sbjct: 63 GTPAYFLDESDFRARCRAWADAF-GPDADVFYAGKAFLSRAVVRWLKEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E A++ K + I+ ++ ++ + AQ+ + Sbjct: 122 LTTALDAGMPAERIAFHGNNKTVAEIERAVEAGVGRIVLDSFQEIVRVAHIAQRHGVRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 +R+ V + G D + + + G+ H + Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIALADGQAAEAVRRALSLDGLELIGVHSHIGSQ 241 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +++ + + ++ I LGGG+ + + Sbjct: 242 IFDMAGFEVSARRVVQLLAEIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALSD 301 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +I +EPG AIV T V I + V VD + ++ Sbjct: 302 IVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + + P V G+ C +GDI + F + GD I+ Y Sbjct: 362 ALYDAEYSVALVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVRDGEARVIVRRETEEDLLR 459 >gi|332879997|ref|ZP_08447681.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681993|gb|EGJ54906.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 401 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 58/385 (15%), Positives = 112/385 (29%), Gaps = 27/385 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D K+ + + +++ A+K + + + + G + S+ Sbjct: 14 GSPVYVYDADKISSQYQRLTAAFSSVPHLRINYAMKALSNISVLKLMKKLGAGLDTVSIQ 73 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG F + + + + + + + +S L +F K + Sbjct: 74 EVQLGLRAGFAPQQIIFTPNGVSIDEIEEAMRLGVQLNIDNLSVLEQFGSK--HPEVPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173 +RINP V S+ G ++NG+ H + Sbjct: 132 IRINPHVMAGGNSNISVGHIDSKFGISIHQIPHILRIVENTKMHINGIHIHTGSDILDID 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 F + I E +++I G G K+ ++ + L E + E Sbjct: 192 VFLYAAE-ILFEMAKNFKNLQFIDFGSGFKVPYKEGDIQTNIEELGERLSARFLAFCQEY 250 Query: 234 GE----------AIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES--AT 280 G +V+ V + + VDS + Sbjct: 251 GRDLTLAFEPGKFLVSQAGYFLVKVNVVKQTTSTVFAGVDSGFNHLIRPMFYGATHFIEN 310 Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I G V G C D F + GD + F + Y + +N Sbjct: 311 ISNPEGRKRFYSVVGYVCET-DTFASNRQIAEITEGDILCFHNAGAYCYTMSSNYNSRLR 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P + R +++D Sbjct: 370 PAEVLWYKGEAHLIRRAETFDDLVR 394 >gi|207091832|ref|ZP_03239619.1| diaminopimelate decarboxylase [Helicobacter pylori HPKX_438_AG0C1] Length = 405 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIEKIAQSLGVKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K V+VD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD+I+ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKDVHLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|330446227|ref|ZP_08309879.1| carboxynorspermidine decarboxylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490418|dbj|GAA04376.1| carboxynorspermidine decarboxylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 369 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 171/361 (47%), Positives = 239/361 (66%), Gaps = 3/361 (0%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 ID+QKL+NNL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS +EV LG E Sbjct: 2 IDEQKLINNLEQAKKLKQLSGVKLVLALKCFSTWGVFDVMKPYLDGTTSSGPFEVRLGAE 61 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 KFGGETHAY+V Y +++ VL C+ IIFN++SQL + A +GLR+NP +S Sbjct: 62 KFGGETHAYSVGYSQEDVEDVLQYCNKIIFNSISQLQAHRHLADGKAS-VGLRLNPGISC 120 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188 + LADP R FSRLG + + ++G MFH NCENKS F +L +I + FG Sbjct: 121 AGQDLADPARQFSRLGVQENLLTDELFDALDGAMFHMNCENKSADAFITLLDSIAERFGR 180 Query: 189 FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 ++++++W+SLGGG+ FT DY ++ LK F+E++SVQ+YLEPGEAI+T TT L TV Sbjct: 181 YLSKLDWVSLGGGVFFTWPDYELEKLATALKAFAERFSVQLYLEPGEAIITQTTDLVVTV 240 Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAGDIFGEF 306 +DI EN IVDS+ EAH D L+Y E ATI G + ++ SCLAGD F Sbjct: 241 VDIVENEMKTAIVDSATEAHRLDTLIYNEPATITESSEEGSHEYVIGSCSCLAGDQFCVT 300 Query: 307 HFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 FE+P+ IG ++ D AGY + + NWFNG+ MP+I + +G I+ + EFSY+D+ +L Sbjct: 301 SFEQPLTIGQKLHIADSAGYTMVKLNWFNGLRMPSIYCRRSNGNIEKLNEFSYDDFAASL 360 Query: 367 S 367 S Sbjct: 361 S 361 >gi|113869390|ref|YP_727879.1| diaminopimelate decarboxylase [Ralstonia eutropha H16] gi|113528166|emb|CAJ94511.1| diaminopimelate decarboxylase [Ralstonia eutropha H16] Length = 419 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 117/387 (30%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + ++ A+K + + + G S E Sbjct: 27 GTPTYVYSRAALTAAYQAYAAACQGRKAQVQYAMKANSNLAVLQVFAKLGAGFDIVSGGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K A+ + ++ +L++ + A ++ K+ Sbjct: 87 LKRVLAAGGDPRKVVFSGVGKSAAEMELALAHDVRCFNVESIPELDRLNEVAGRVGKRAR 146 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 LRINP V ++ G +D + + V G+ H + Sbjct: 147 VSLRINPDVDAKTHPYISTGLKGNKFGIAFEDVLPTYRAAAALPHLEVTGIDCHIGSQIT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + L ++ + ++E I +GGG+ T D D E+ Sbjct: 207 EVEPYLEALDKVLDVVEALERDGIRLEHIDVGGGLGITYTDETPPDITGFATTLLERVAA 266 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278 ++ EPG ++V N L T V + + D+++ + Sbjct: 267 RGHGHREVLFEPGRSLVGNAGVLLTQVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHRI 326 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + T + G C +GD G V+ GD ++ Y + +N Sbjct: 327 EPVVLRDAQAATYDIVGPVCESGDWLGRDRALA-VQPGDLLAVMSAGAYGFTMSSNYNTR 385 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 386 PRAAEVMVDGASVHLVRERELVEDLFR 412 >gi|331268703|ref|YP_004395195.1| diaminopimelate decarboxylase [Clostridium botulinum BKT015925] gi|329125253|gb|AEB75198.1| diaminopimelate decarboxylase [Clostridium botulinum BKT015925] Length = 437 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 119/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y++D++ + +N + K K+ A K F M + + S Sbjct: 34 KTPLYVMDEELIRDNCRRYIKGFKAHQGINKVAYAGKAFLTLAMCQLIKEEGMCLDVVSG 93 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ ++ F E ++ K E + + + ++ A Sbjct: 94 GELYTAYKGNFPMEKVYFHGNNKTLEEIDMGVKFGVGRFVADNFYEIENINKIAKKHNKI 153 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 +KI LRI P + + S+ G + G H Sbjct: 154 QKIILRITPGIEAHTHDYIKTGQIDSKFGFTLLQNQTLKAVEMANDFSNIEFVGFHCHIG 213 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLK--- 219 + + +K + +I+ + LGGG + Sbjct: 214 SQIFEIEPYKDEVKIMLSLIKEVNDKLGCKIKELDLGGGFGIYYGKGDCPKKIEEFCEAI 273 Query: 220 --------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + +EPG +IV N T T+ I E + V + ++ Sbjct: 274 LQEADKVSKELDIEVPALVIEPGRSIVGNAGTTLYTIGSIKEIPEIRKYVSVDGGMTDNI 333 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N + G+ C +GDI E + GD ++ Sbjct: 334 RPALYRANYECLVANNVNANSKEKVTISGKCCESGDILLENVKVSHAESGDILAVLSTGA 393 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N I + + + SY+D Sbjct: 394 YGYSMSSNYNKIPRSAVVFVKNGKSKLICKRQSYDDLI 431 >gi|313206511|ref|YP_004045688.1| diaminopimelate decarboxylase [Riemerella anatipestifer DSM 15868] gi|312445827|gb|ADQ82182.1| diaminopimelate decarboxylase [Riemerella anatipestifer DSM 15868] gi|325336041|gb|ADZ12315.1| Diaminopimelate decarboxylase [Riemerella anatipestifer RA-GD] Length = 400 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 117/385 (30%), Gaps = 26/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + + + + A K + + + S+ E Sbjct: 15 GTPVYVYDAESIKQQYEKLTSSFSE-KTRFFYAAKALTNINILKYVEKLGASLDCVSINE 73 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V LG F + + D + + I + +S L +F K I + Sbjct: 74 VKLGLKAGFSKDRILFTPNSVDISEVEEAVELGVHINIDNISILEQFGTK-FGGSYPIFV 132 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFLC 174 R+NP + S+ G E NV GL H E K Sbjct: 133 RVNPHIFAGGNYKISTGHIDSKFGISIHQMRHIERVAKTTGLNVEGLHMHTGSEIKDPDV 192 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224 F L+ + E +++I +G G ++ ++ + L + EK Sbjct: 193 FLQGLEIM-FELAEHFPNLKYIDMGSGFKIPYQEGDMETDVKSLGKKVEKALAKFNEEQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLL--YQESATI 281 +Q++ EPG+ +V + I + V V+S + Y + + Sbjct: 252 KELQLWFEPGKFLVGKSGHFLVKSNVIKQTTATVFVGVNSGFNHLIRPMFYDSYHKIENL 311 Query: 282 YPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 GP V G C D F V+ GD + F + Y + FN P Sbjct: 312 SNPNGPERIYTVVGNICET-DTFAWDRKINEVREGDILVFRNAGAYGFEMSSNFNSRLKP 370 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + D N Sbjct: 371 AEVFWLDGKAHLIRKRDEFEDLLRN 395 >gi|251780918|ref|ZP_04823838.1| diaminopimelate decarboxylase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085233|gb|EES51123.1| diaminopimelate decarboxylase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 431 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + N + K ++ A K F M +N+ S Sbjct: 29 GTPLYVMDEGLIRQNCNDYYRYFKCNNSLNRVAYAGKAFLTLEMCKIINEENLSLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + ++ K + V + + ++ A Sbjct: 89 GELFTAYKSGFPLDKVMFHGNNKTLDEIELGVKLGVGRFVVDNYYEMEALNRMAASYNKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG-----EKCKDKIES----EIKNVNGLMFHNN 166 +KI LRI P + + S+ G +D I ++GL H Sbjct: 149 QKIFLRITPGIEAHTHEYIKTGQVDSKFGFAPVGNMIEDAINKSIDLPNIELSGLHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212 + + ++ + I+ + LGGG Sbjct: 209 SQIFEIEPYEDAVEIMLGLIKKIQENTGYLIKELDLGGGFGIYYNRGDKPKTTKEYCEAI 268 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + + + +EPG +IV N+ T+ I + V + ++ Sbjct: 269 LNKVDEVCSRTGQSKPSLIIEPGRSIVGNSGITLYTIGSIKDIPGVRKYVSVDGGMSDNI 328 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + N T +CG+ C +GDI + D +S Sbjct: 329 RPALYNAEYECMLANKVEKDLKETVTICGKCCESGDILLNNVNLSEPQSNDILSVMTTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + R +Y D N Sbjct: 389 YGYSMSNNYNKIPRPPVVMVKDNKERLICRRETYEDLIQN 428 >gi|325996891|gb|ADZ49099.1| putative carboxynorspermidine decarboxylase [Helicobacter pylori 2017] Length = 405 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 136/400 (34%), Positives = 208/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y ++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSEFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADSLCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 ++Y ++ LEPGEAI L +V+DI +N + I+D+S AH+PD L +I Sbjct: 246 KRYHDIEVILEPGEAIGWQCGFLIASVIDIVQNDQESAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 LKISVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKIDSQG-FKILKSFSYEDYKNR 404 >gi|308061323|gb|ADO03211.1| carboxynorspermidine decarboxylase [Helicobacter pylori Cuz20] Length = 405 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 135/400 (33%), Positives = 209/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N + + +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVCQQSGAKILLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSEFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S H+PD L +I Sbjct: 246 ERYHDIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSTHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 FKISVENDEEIVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404 >gi|209521076|ref|ZP_03269807.1| diaminopimelate decarboxylase [Burkholderia sp. H160] gi|209498495|gb|EDZ98619.1| diaminopimelate decarboxylase [Burkholderia sp. H160] Length = 420 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 116/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + +A+K + + + + G S E Sbjct: 28 GTPLYVYSRAALTAAWNAYAGACAGRRASAHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + E ++ K DA+ + ++ +L++ A Sbjct: 88 LARVLAAGGKAENTVFSGVGKQASEMRDALAAGVKCFNVESIPELDRLNAVAGEMGKKAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D V G+ H + Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFDDARATYQAAAAMANLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + ++ I I +GGG+ T D + + ++ ++ Sbjct: 208 EVAPYLDAIDKVLELVEQIEQDGVTIRHIDVGGGLGITYDDETPPEIGEFVRTVLDRIEA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 ++Y EPG ++V N L T + + KN IVD+++ + Sbjct: 268 RGHAHREVYFEPGRSLVGNAGVLLTRLEFLKPGEDKNFAIVDAAMNDLARPAMYDAYHAI 327 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + + V G C +GD G V+ GD ++ Y + +N Sbjct: 328 EPVVKRDVPAHVYDVVGPVCESGDWLGRERLLA-VEPGDLLAIRSAGAYGFVMSSNYNTR 386 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + Sbjct: 387 ARAAEVMVDGTQAHVVRAREEVEQLFA 413 >gi|307636706|gb|ADN79156.1| putative carboxynorspermidine decarboxylase [Helicobacter pylori 908] gi|325995291|gb|ADZ50696.1| putative Carboxynorspermidine decarboxylase [Helicobacter pylori 2018] Length = 405 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 136/400 (34%), Positives = 209/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y ++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSEFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADSLCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 ++Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 KRYHDIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 LKISVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKIDSQG-FKILKSFSYEDYKNR 404 >gi|261838891|gb|ACX98656.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori 52] Length = 405 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 136/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S ++ +P SRLG + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSGFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F F+ P+K GD+I F+D+ Sbjct: 306 LKISVENDEELIEIEKGENQGAFSYFLGGPTCLAGDFMGSFSFDVPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404 >gi|323702566|ref|ZP_08114229.1| diaminopimelate decarboxylase [Desulfotomaculum nigrificans DSM 574] gi|323532540|gb|EGB22416.1| diaminopimelate decarboxylase [Desulfotomaculum nigrificans DSM 574] Length = 446 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 62/399 (15%), Positives = 122/399 (30%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ID+ N + G +++ A K + + Q G S Sbjct: 30 GTPLYVIDEALFRQNCRDYYRAFTEEYGAEVIYASKTLTNLAVCTIVEQEGLGLDVVSGG 89 Query: 62 EVM-LGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ +F ++ + A+ I+ + + +L A +L + Sbjct: 90 ELYTAAMARFPMHRVYFHGNNKSPEELRQALEYKVGRIVVDNLYELELLNQIAGELATRA 149 Query: 119 GLRIN--PSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNC 167 + I P V + S+ G + +E + G H Sbjct: 150 KIIIRLSPGVEAHTHEYIKTGQIDSKFGLAIENGMAMAAVKRCLELNNVELKGFHCHIGS 209 Query: 168 ENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ------- 216 + ++ M+ ++ + E + LGGG+ + Sbjct: 210 QIFELQSYAHAAEVMMDFVQDVYRATGYLTEELDLGGGLGIYYCQGDEPRPVKEYADIMM 269 Query: 217 -RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 LK + +Y+ +I +EPG +I T TV I + V + + Sbjct: 270 GALKARAARYNLPLPKIIVEPGRSISGPAGTTLYTVGAIKDIPGIRKYVSVDGGMGDNPR 329 Query: 271 DYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + A + G+ C +GD+ ++ GD ++ Y Sbjct: 330 PALYQAKYEACAANRMTEANTEKVSIAGKCCESGDMLIWDIELPALQAGDILAVASTGAY 389 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N + +N + P + + +R Y D N Sbjct: 390 NYSMSMNYNRLPRPAMVLVGGGKADLIVRREDYADLIRN 428 >gi|283955739|ref|ZP_06373230.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 1336] gi|283792694|gb|EFC31472.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 1336] Length = 402 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 55/383 (14%), Positives = 122/383 (31%), Gaps = 22/383 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ + + K ++ A+K + + G S+ EV Sbjct: 12 TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMFANLDSGFDCVSIGEV 71 Query: 64 MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ K + A+ + I + +++ + A++L+ K + Sbjct: 72 KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131 Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE--- 168 R+NP+V ++ G + + G+ FH + Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDTARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 + ++ + +E +++ +GGG+ + + + Q + Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECEVDLYSYAQGVLAQLHG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I +EPG +V + +VL K V+VD ++ + L I P Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311 Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C +GD F + + GD + ++ Y + + +N N Sbjct: 312 YNQAQESLCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVC 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + ++ D Sbjct: 372 ELALEEGQVRLIRQRENFEDQIA 394 >gi|208434236|ref|YP_002265902.1| diaminopimelate decarboxylase [Helicobacter pylori G27] gi|208432165|gb|ACI27036.1| diaminopimelate decarboxylase [Helicobacter pylori G27] Length = 405 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 122/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IHRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELTTIETIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K V+VD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|188527096|ref|YP_001909783.1| diaminopimelate decarboxylase [Helicobacter pylori Shi470] gi|188143336|gb|ACD47753.1| diaminopimelate decarboxylase [Helicobacter pylori Shi470] gi|308063152|gb|ADO05039.1| diaminopimelate decarboxylase [Helicobacter pylori Sat464] Length = 405 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ QR+ + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVNLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396 >gi|254778993|ref|YP_003057098.1| Diaminopimelate decarboxylas (DAP decarboxylase) [Helicobacter pylori B38] gi|254000904|emb|CAX28840.1| Diaminopimelate decarboxylas (DAP decarboxylase) [Helicobacter pylori B38] Length = 405 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IHRALKAGIKPYRIVFSGVGKSVFEIEQALKLNILFLNVESFMELKTIETIAQSLEIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD+++ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKDAHFPELEPGDKLAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|295836505|ref|ZP_06823438.1| diaminopimelate decarboxylase [Streptomyces sp. SPB74] gi|295826063|gb|EFG64650.1| diaminopimelate decarboxylase [Streptomyces sp. SPB74] Length = 465 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 113/398 (28%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D++ G + A K F + + L++ S E Sbjct: 65 GTPAYFLDEEDFRARCRDWRSAFGE-GADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 123 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 ++ A++ K I+ ++ +L + AQ + Sbjct: 124 LLTALDAGMPAARIAFHGNNKTAAEIERAVSAGVGRIVVDSFQELARVAHTAQAHGRVQR 183 Query: 120 --LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 +R+ V + G E + + + + G+ H + Sbjct: 184 VQIRVTVGVEAHTHEFIATAHEDQKFGLALAGGQAAEAVRRALTLDGIELVGIHSHIGSQ 243 Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F + + ++ I LGGG+ + + Sbjct: 244 IFDMAGFEVSARRVVGLLAEIRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALGD 303 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG AIV T V I + V VD + ++ Sbjct: 304 IVTRECESAGLAVPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 363 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E A+ + P V G+ C +GDI F + GD ++ Y Sbjct: 364 ALYDAEYSVALASRVSDAEPMLVRVVGKHCESGDIVVRDAFLPADLAPGDLLAVPATGAY 423 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + G +R + D Sbjct: 424 CRSMASNYNHALRPPVVAVRDGGARVVVRRETEEDLLR 461 >gi|108562445|ref|YP_626761.1| carboxynorspermidine decarboxylase [Helicobacter pylori HPAG1] gi|107836218|gb|ABF84087.1| carboxynorspermidine decarboxylase [Helicobacter pylori HPAG1] Length = 405 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKILLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++EK F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 FKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404 >gi|305664829|ref|YP_003861116.1| diaminopimelate decarboxylase [Maribacter sp. HTCC2170] gi|88707951|gb|EAR00190.1| diaminopimelate decarboxylase [Maribacter sp. HTCC2170] Length = 413 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 70/384 (18%), Positives = 121/384 (31%), Gaps = 27/384 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 P Y+ D +K+++ + K +KL A K + + +N G + S+ EV Sbjct: 16 PVYVYDSEKIISQFNRLTNAFKGVNQLKLNYAAKALSNIAILRLMNSLGSGLDTVSIQEV 75 Query: 64 MLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 LG F E+ + EI+ I + +S L +F K + +R Sbjct: 76 QLGLLAGFKPESIIFTPNGVSLEEIEEAAKLGVQINIDNLSVLEQFGGK--HPDIPVCIR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175 INP V S+ G N+NG+ H + F Sbjct: 134 INPHVMAGGNSNISVGHIDSKFGISIHQIPHLLRIVELTKMNINGIHMHTGSDILDIDVF 193 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230 + I E +++I G G K+ ++ + L + + Sbjct: 194 LYASE-ILFETAKNFKNLDFIDFGSGFKVPYKEGDIETNIEELGKKLTGRFNEFCKEYGK 252 Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES--ATIY 282 EPG+ +V+ V + + VDS + L I Sbjct: 253 ELTLAFEPGKFLVSEAGHFLAKVNVVKQTTSTVFASVDSGFNHLIRPMLYGASHTIENIS 312 Query: 283 PNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 G V G C D FG + GD + F++ Y + +N P Sbjct: 313 NPQGRERYYSVVGYICET-DTFGNNRRINEISEGDILCFKNAGAYCFTMASNYNSRYRPA 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365 + + D +++D N Sbjct: 372 EVLWHDDKAHLIRERETFDDLIKN 395 >gi|228914093|ref|ZP_04077713.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229090475|ref|ZP_04221713.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-42] gi|228692825|gb|EEL46546.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-42] gi|228845546|gb|EEM90577.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 449 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 221 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 281 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ V D ++ Sbjct: 341 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440 >gi|124008785|ref|ZP_01693474.1| diaminopimelate decarboxylase [Microscilla marina ATCC 23134] gi|123985698|gb|EAY25578.1| diaminopimelate decarboxylase [Microscilla marina ATCC 23134] Length = 418 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 73/386 (18%), Positives = 124/386 (32%), Gaps = 26/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D +K+ L+ K +K+ A K + L G S+ E Sbjct: 23 DTPLYVYDAEKMATKLNMLKDAFKGLNLKIKYAAKALTNVSVLKFLRTQGVGLDVVSIQE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 LG + F E + E + I + +S L +F A + Sbjct: 83 AHLGLKTGFKPEEILFTPNCVSLEEIKMAVELGLVINIDNISILEQFGH-AYGDSVPCCI 141 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCENKSFLC 174 RINP + S+ G V GL H + Sbjct: 142 RINPHLMAGGNANISVGHIDSKFGVSILQARHLLRVIKTNNIKVTGLHMHTGSDILDAEV 201 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKEFSEKYS 226 F +I + + +E++ G G K+ V R KEF + Y Sbjct: 202 FLR-GADILFDLAQDLPDLEFVDFGSGFRVAYKEGDVTTDIVDLGKKLTVRFKEFCKDYG 260 Query: 227 VQ--IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + I+ EPG+ +V+ I + + S H+ ++Y TI+ Sbjct: 261 RELEIWFEPGKFLVSEAGHFLMKTNVIKTTPATVFVGVDSGFNHLIRPMMYDSHHTIFNV 320 Query: 285 TGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + P + V G C D FG V+ GD I+ ++ Y + + +N Sbjct: 321 SNPNSETTRVYTVVGYICET-DTFGWDRKLNEVREGDIIALKNAGAYGFSMASNYNSRFR 379 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + + + +D N Sbjct: 380 PAEVLVHNGKAHLIRKRETMDDILRN 405 >gi|228945117|ref|ZP_04107477.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229121060|ref|ZP_04250300.1| Diaminopimelate decarboxylase [Bacillus cereus 95/8201] gi|228662389|gb|EEL17989.1| Diaminopimelate decarboxylase [Bacillus cereus 95/8201] gi|228814561|gb|EEM60822.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 449 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 127/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD---------KDYPVKD 213 + F ++ + + Q ++ +++GGG + Y Sbjct: 221 SQIFETAGFVRAIEVLHQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280 Query: 214 FCQRLKEFSEKYSV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 ++F+ + +I++EPG +IV + T TV + + V + ++ Sbjct: 281 TSAVREQFTVRNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ V D ++ Sbjct: 341 RPALYNARYEAMLANRGNDKNEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440 >gi|240851353|ref|YP_002972756.1| diaminopimelate decarboxylase [Bartonella grahamii as4aup] gi|240268476|gb|ACS52064.1| diaminopimelate decarboxylase [Bartonella grahamii as4aup] Length = 424 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 109/387 (28%), Gaps = 26/387 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L+ + L A+K + + L G S Sbjct: 25 VGTPFYCYSANALVTRFKDYKKAFQGMPSLLAYAVKANSNQAVLRLLANNGAGADVVSEG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ Y+ K D + +L + +A L K Sbjct: 85 ELRRALAVGIPAHRIVYSGVGKTMREIDFALAQDIYCFNVESEPELEQLSQRAVALSKIA 144 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 LRINP V + ++ G E+ K V G+ H + Sbjct: 145 RVSLRINPDVDAKTHKKITTGKSENKFGIPLLLAREAYKKADSLPGLQVCGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221 F I I I +GGG+ D+ +K++ Sbjct: 205 CDLKPFEEAFFLIADCVRQLWSDGYAITHIDIGGGLGIAYGCEQHTVPSPFDYAALVKKY 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 + I +EPG +IV L T+VL + +N VIVD+++ + L Sbjct: 265 IAPLGINIVVEPGRSIVGQAGVLMTSVLYLKRGQGRNFVIVDAAMNDLMRPTLYDAWQNV 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + A + G C GD + GD ++ Y + +N Sbjct: 325 VLVKKAAKDAPLIRADIVGSVCETGDYLALDRCLPILAPGDLLAITQAGAYGAVMASTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDY 362 + + Y Sbjct: 385 SRLLVPEVLVQDTCYAVVRPRLDYAQL 411 >gi|308182464|ref|YP_003926591.1| diaminopimelate decarboxylase [Helicobacter pylori PeCan4] gi|308064649|gb|ADO06541.1| diaminopimelate decarboxylase [Helicobacter pylori PeCan4] Length = 405 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 122/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IHRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIETIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K V+VD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPSKGREISPCDVVGPVCESSDTFLKDANLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|317008698|gb|ADU79278.1| carboxynorspermidine decarboxylase [Helicobacter pylori India7] Length = 405 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 135/400 (33%), Positives = 209/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q +KD+ +K Sbjct: 67 EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYAAYKDRILDKNK 126 Query: 117 K----------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 + +GLRINP S + +P SRLG + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + N G ++ + G +CLAGD G F F+ P+K GD+I F+D+ Sbjct: 306 FKISVENDEELIEVERGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404 >gi|317012132|gb|ADU82740.1| diaminopimelate decarboxylase [Helicobacter pylori Lithuania75] Length = 405 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ + K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLSYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIETIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD+I+ E V Y + + +N Sbjct: 312 TPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|210134219|ref|YP_002300658.1| carboxynorspermidine decarboxylase [Helicobacter pylori P12] gi|210132187|gb|ACJ07178.1| carboxynorspermidine decarboxylase [Helicobacter pylori P12] Length = 405 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 136/400 (34%), Positives = 209/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N + + +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EARLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ +EW++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFRPYLENMEWVNFGGGHHITKSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F F+ P+K GD+I F+D+ Sbjct: 306 LKISVENDEELVEMEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404 >gi|260797946|ref|XP_002593961.1| hypothetical protein BRAFLDRAFT_118823 [Branchiostoma floridae] gi|229279194|gb|EEN49972.1| hypothetical protein BRAFLDRAFT_118823 [Branchiostoma floridae] Length = 447 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 64/392 (16%), Positives = 124/392 (31%), Gaps = 31/392 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRK-NAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P+YL ++ +N+ K +L +LK + TL G + S Sbjct: 42 SPFYLYSLSQVRHNVSRYKEALKTLPNPHVLGYSLKANGNLEILKTLRAMGCGAVTVSGN 101 Query: 62 EVMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ L F ++ YN +D E++ + I ++ L + A + ++ Sbjct: 102 EIRLALTAGFSPDSIVYNGNGKQDWELELAVRVNCLINVDSDFDLRHVRSAADTVRQRAR 161 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCEN 169 +RINP + S+ G +C + GL H Sbjct: 162 VLIRINPDIDPRVHPYNSTGLASSKFGLECSQLPGLLEKVRRWPAQLQLVGLHCHLGSTI 221 Query: 170 KSFLCFSAML----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLK 219 F ++ +E + ++++GGG+ ++ Sbjct: 222 TDVSLFRDVVSVVSAEMESVRSQGFHDLRYLNMGGGLGIDYLRQQDSTNPSPADLVSSIR 281 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES 278 + ++ + LEPG +I+ + L T V+ + K V+ D S+ + L Sbjct: 282 DALTDKNICLILEPGRSIIGDAAILVTKVIGVKGNGKKRFVVTDGSMTEVIRPSLYSAYH 341 Query: 279 ATIYP------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + V G C GD G+ G + DV Y + + Sbjct: 342 HIQLTEPSQAEDPTEQEYDVVGPVCECGDFLGKDRTIPTPHEGCGLVVFDVGAYCSSMAS 401 Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 +N P + + R + D Sbjct: 402 NYNMRIRPAEVLVDGATWRFIRRPETLEDMTR 433 >gi|302869606|ref|YP_003838243.1| diaminopimelate decarboxylase [Micromonospora aurantiaca ATCC 27029] gi|302572465|gb|ADL48667.1| diaminopimelate decarboxylase [Micromonospora aurantiaca ATCC 27029] Length = 461 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 122/398 (30%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ L + A K F + + + + E Sbjct: 62 GTPAYVLDEDDLRERCREFRAAF--PDADVYYAGKAFLCRAVVRMIAEEGMFLDVCTGGE 119 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + E ++ K AV + II ++ +++++ + A++ + K Sbjct: 120 LATALSAGMPPERIGFHGNNKSVAELTRAVDAGVGRIIVDSFTEIDRLSELARERGVRPK 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + +R+ V + G ++ ++ + GL H + Sbjct: 180 VLVRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAAAAAFKILDEDVLELRGLHSHIGSQ 239 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKE 220 F +L + ++ + LGGG D +RL++ Sbjct: 240 IFDASGFEVSARRVLALQSQIRDARGVELPELDLGGGFGIAYTTQDDPASPHDLAKRLRK 299 Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTT------VLDISENIKNLVIVDSSVEA 267 + + +EPG AIV V + + + ++ Sbjct: 300 IVDGECAAENLAVPHLSVEPGRAIVGPAVFTLYQAGTVKDVDGLRTYVSVDGGMSDNIRT 359 Query: 268 HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 + D A P A V G+ C +GDI + F V+ GD ++ Y Sbjct: 360 ALYDASYSATLANRTSTAQPMLARVVGKHCESGDIVVKDEFLPADVQPGDLVAVPGTGAY 419 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + +R + +D Sbjct: 420 CRSMASNYNHVPRPPVVAVREGRARLIVRRETEDDLLA 457 >gi|118476980|ref|YP_894131.1| diaminopimelate decarboxylase [Bacillus thuringiensis str. Al Hakam] gi|118416205|gb|ABK84624.1| diaminopimelate decarboxylase [Bacillus thuringiensis str. Al Hakam] Length = 449 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQNGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 221 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 281 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ V D ++ Sbjct: 341 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440 >gi|228926550|ref|ZP_04089621.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833138|gb|EEM78704.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 449 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQNGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 221 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 281 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ V D ++ Sbjct: 341 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440 >gi|199598988|ref|ZP_03212396.1| Diaminopimelate decarboxylase [Lactobacillus rhamnosus HN001] gi|199590096|gb|EDY98194.1| Diaminopimelate decarboxylase [Lactobacillus rhamnosus HN001] Length = 447 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 64/399 (16%), Positives = 129/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D + + + + + AGV + A K FA M++ S Sbjct: 26 QTPLYVYDVGAIRHQIRAFKQVFETAGVAYAVSYASKAFATIAMYEVAKAEAIHVDVVSG 85 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKD--KAQKLH 115 E+ F + +++ K A+ + TII + +L+ + KA Sbjct: 86 GELYTAQAASFPMDKVSFHGNNKSKAELEQALDAGVGTIIVDNFYELDLLDELLKAAVGK 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + + +R+ P +S + S+ G E K + + N+ G+ H Sbjct: 146 QNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESGQADEAAKRILADDHLNLLGIHAHIG 205 Query: 167 CENKSFLCFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F A+ + + + F + +++GGG + Sbjct: 206 SQIFEVAGFEAVTQKLLTVLDHWHQQFGFTPKVLNVGGGFGIAYTKQDDPLPPEAFVQAI 265 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 +++EPG +IV TV + + V VD + ++ Sbjct: 266 VTTLKTQSHGFNWPLPAVWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + G+ C +GDI + + GD ++ D Sbjct: 326 RPALYQAQYTAVVANHPTAQPTEHVHLVGKYCESGDILIDDAPLPATQPGDVVAVFDTGA 385 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + + +Y D Sbjct: 386 YGYSMASNYNRNPRPAVVFVEDGQAQLVVTRETYADLIQ 424 >gi|315503932|ref|YP_004082819.1| diaminopimelate decarboxylase [Micromonospora sp. L5] gi|315410551|gb|ADU08668.1| diaminopimelate decarboxylase [Micromonospora sp. L5] Length = 461 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 122/398 (30%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ L + A K F + + + + E Sbjct: 62 GTPAYVLDEDDLRERCREFRAAF--PDADVYYAGKAFLCRAVVRMIAEEGMFLDVCTGGE 119 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + E ++ K AV + II ++ +++++ + A++ + K Sbjct: 120 LATALSAGMPPERIGFHGNNKSVAELTRAVDAGVGRIIVDSFTEIDRLSELARERGVRPK 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + +R+ V + G ++ ++ + GL H + Sbjct: 180 VLVRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAAAAAFKILDEDVLELRGLHSHIGSQ 239 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKE 220 F +L + ++ + LGGG D +RL++ Sbjct: 240 IFDASGFEVSARRVLALQSQIRDARGVELPELDLGGGFGIAYTTQDDPASPHDLAKRLRK 299 Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTT------VLDISENIKNLVIVDSSVEA 267 + + +EPG AIV V + + + ++ Sbjct: 300 IVDGECAAENLAVPHLSVEPGRAIVGPAVFTLYQAGTVKDVDGLRTYVSVDGGMSDNIRT 359 Query: 268 HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 + D A P A V G+ C +GDI + F V+ GD ++ Y Sbjct: 360 ALYDASYSATLANRTSTAPPMLARVVGKHCESGDIVVKDEFLPADVQPGDLVAVPGTGAY 419 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + +R + +D Sbjct: 420 CRSMASNYNHVPRPPVVAVREGRARLIVRRETEDDLLA 457 >gi|228932803|ref|ZP_04095673.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826853|gb|EEM72617.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 449 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGEF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 221 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 281 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ V D ++ Sbjct: 341 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440 >gi|237749545|ref|ZP_04580025.1| diaminopimelate decarboxylase [Oxalobacter formigenes OXCC13] gi|229380907|gb|EEO30998.1| diaminopimelate decarboxylase [Oxalobacter formigenes OXCC13] Length = 428 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 61/400 (15%), Positives = 126/400 (31%), Gaps = 36/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-----GVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 TP Y+ K+ L+ N K + ++K + + + L Q G Sbjct: 27 GTPLYVYSKKALVENFRQYADTCKRFESDKIHSLVCYSVKSNSNLAILNILGQEGAGFDI 86 Query: 58 SSLYEV-MLGHEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL 114 S E+ + ++ K A+ + + ++L++ AQ++ Sbjct: 87 VSGGELQRVIAAGCDPRKVIFSGVGKTANEIGLALKHDIHCFNIESFAELHRINQVAQEM 146 Query: 115 HKKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHN 165 K+ R+NP+V ++ G ++ + +V G+ H Sbjct: 147 GKQARVSFRVNPNVDPKTHPYISTGLKENKFGIPYEEALACYKAAASMTNIDVTGIDCHI 206 Query: 166 NCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + L ++ + ++ I +GGGI T D L Sbjct: 207 GSQLLDDAPLLEALDKLLHLVDQLSEEGITLKHIDIGGGIGITYDDEKPVAISDYLTRLF 266 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVP 270 K+ S+ + EPG +I N L T V + + KN IVD+++ + Sbjct: 267 TRVENWRKQKHPDQSIGLMFEPGRSISGNAGLLLTQVQYLKTNSDKNFAIVDAAMNDLMR 326 Query: 271 DYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + + G C +GD + ++ D ++ Y Sbjct: 327 PSLYEAWHKVLPVSNRKGEATSYDIVGPVCESGDWLAKQRELV-IQADDILAIMSAGAYG 385 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + +N + + R + + + S Sbjct: 386 MAMASNYNTRGRAAEVLVDNGNAYLIRRRETPEELFALES 425 >gi|229016774|ref|ZP_04173704.1| Diaminopimelate decarboxylase [Bacillus cereus AH1273] gi|229022979|ref|ZP_04179496.1| Diaminopimelate decarboxylase [Bacillus cereus AH1272] gi|228738285|gb|EEL88764.1| Diaminopimelate decarboxylase [Bacillus cereus AH1272] gi|228744510|gb|EEL94582.1| Diaminopimelate decarboxylase [Bacillus cereus AH1273] Length = 449 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVK---------- 212 + F ++ + + ++ +++GGG + Sbjct: 221 SQIFETAGFVRAIEVLRQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVHAV 280 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + E V + ++ Sbjct: 281 TSTIREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGAVKEIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 341 RPALYGARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDINLPQVAPSDLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440 >gi|52143926|ref|YP_082902.1| diaminopimelate decarboxylase [Bacillus cereus E33L] gi|51977395|gb|AAU18945.1| diaminopimelate decarboxylase [Bacillus cereus E33L] Length = 438 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLHQFLEELRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429 >gi|258538295|ref|YP_003172794.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus Lc 705] gi|257149971|emb|CAR88943.1| Diaminopimelate decarboxylase [Lactobacillus rhamnosus Lc 705] Length = 447 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 64/399 (16%), Positives = 128/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D + + + + + AGV + A K FA M++ S Sbjct: 26 QTPLYVYDVGAIRHQIRAFKQVFETAGVAYAVSYASKAFATIAMYEVAKAEAIHVDVVSG 85 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKD--KAQKLH 115 E+ F + +++ K A+ + TII + +L+ + KA Sbjct: 86 GELYTAQAAGFPMDKVSFHGNNKSKAELEQALDAGVGTIIVDNFHELDLLDELLKAAVGK 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + + +R+ P +S + S+ G E K + + N+ G+ H Sbjct: 146 QNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESGQADEAAKRILADDHLNLLGIHAHIG 205 Query: 167 CENKSFLCFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F A+ + + + F + +++GGG + Sbjct: 206 SQIFEVAGFEAVTQKLLAVLDHWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVQAI 265 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 +++EPG +IV TV + + V VD + ++ Sbjct: 266 VTTLKIQSHGFNWPLPAVWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + G+ C +GDI + GD ++ D Sbjct: 326 RPALYQAQYTAVVADHPTAQPTERVHLVGKYCESGDILIDDAPLPATHPGDVVAVFDTGA 385 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + + +Y D Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETYADLIQ 424 >gi|223042044|ref|ZP_03612221.1| diaminopimelate decarboxylase [Actinobacillus minor 202] gi|223017161|gb|EEF15596.1| diaminopimelate decarboxylase [Actinobacillus minor 202] Length = 416 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 115/386 (29%), Gaps = 25/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDNAFGDHPHLICFAVKSNSNIALLNIMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A ++S+L++ + A +L K Sbjct: 86 LERVLVAGGDASKVVFSGVAKSHTEIARALEVGIRCFNVESISELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVQQAREVYRLASRLPNVKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ + + LGGG+ +P + L++ + Sbjct: 206 ELQPFLDATDRLIILMEQLKEDGILLHHLDLGGGLGVPYHGEEPPHPTEYAKALLEKLKD 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESA--- 279 ++I LEPG AI N L T V + N IVD+ + + L Sbjct: 266 YQDLEIILEPGRAITANAGILVTKVEYLKTNEDRRFAIVDTGMNDMIRPALYEAYMELTE 325 Query: 280 -TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 V G C D G+ + GD ++ Y + +N Sbjct: 326 VDRSLPREKAVYDVVGPICETSDFLGKERELA-IAEGDLVAMRSAGAYGATMSSTYNSRP 384 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + S+ D + Sbjct: 385 QAVEIMVDGANCYLIKERASFEDLWR 410 >gi|229550994|ref|ZP_04439719.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus LMS2-1] gi|229315589|gb|EEN81562.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus LMS2-1] Length = 447 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 64/399 (16%), Positives = 128/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D + + + + + AGV + A K FA M++ S Sbjct: 26 QTPLYVYDVGAIRHQIRAFKQVFETAGVAYAVSYASKAFATIAMYEVAKAEAIHVDVVSG 85 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKD--KAQKLH 115 E+ F + +++ K A+ + TII + +L+ + KA Sbjct: 86 GELYTAQAAGFPMDKVSFHGNNKSKAELEQALDAGVGTIIVDNFHELDLLDELLKAAVGK 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + + +R+ P +S + S+ G E K + + N+ G+ H Sbjct: 146 QNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESGQADEAAKRILADDHLNLLGIHAHIG 205 Query: 167 CENKSFLCFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F A+ + + + F + +++GGG + Sbjct: 206 SQIFEVAGFEAVTQKLLAVLDHWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVQAI 265 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 +++EPG +IV TV + + V VD + ++ Sbjct: 266 VTTLKTQSHGFNWPLPAVWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + G+ C +GDI + GD ++ D Sbjct: 326 RPALYQAQYTAVVADHPTAQPTERVHLVGKYCESGDILIDDAPLPATHPGDVVAVFDTGA 385 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + + +Y D Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETYADLIQ 424 >gi|30261517|ref|NP_843894.1| diaminopimelate decarboxylase [Bacillus anthracis str. Ames] gi|47526713|ref|YP_018062.1| diaminopimelate decarboxylase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184346|ref|YP_027598.1| diaminopimelate decarboxylase [Bacillus anthracis str. Sterne] gi|165870390|ref|ZP_02215045.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0488] gi|167634404|ref|ZP_02392725.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0442] gi|167639222|ref|ZP_02397494.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0193] gi|170686644|ref|ZP_02877864.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0465] gi|170706359|ref|ZP_02896820.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0389] gi|177651559|ref|ZP_02934348.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0174] gi|190568073|ref|ZP_03020983.1| diaminopimelate decarboxylase [Bacillus anthracis Tsiankovskii-I] gi|218902627|ref|YP_002450461.1| diaminopimelate decarboxylase [Bacillus cereus AH820] gi|227815733|ref|YP_002815742.1| diaminopimelate decarboxylase [Bacillus anthracis str. CDC 684] gi|229600202|ref|YP_002865930.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0248] gi|254682418|ref|ZP_05146279.1| diaminopimelate decarboxylase [Bacillus anthracis str. CNEVA-9066] gi|254726082|ref|ZP_05187864.1| diaminopimelate decarboxylase [Bacillus anthracis str. A1055] gi|254733834|ref|ZP_05191548.1| diaminopimelate decarboxylase [Bacillus anthracis str. Western North America USA6153] gi|254740474|ref|ZP_05198165.1| diaminopimelate decarboxylase [Bacillus anthracis str. Kruger B] gi|254753865|ref|ZP_05205900.1| diaminopimelate decarboxylase [Bacillus anthracis str. Vollum] gi|254758960|ref|ZP_05210987.1| diaminopimelate decarboxylase [Bacillus anthracis str. Australia 94] gi|300118533|ref|ZP_07056272.1| diaminopimelate decarboxylase [Bacillus cereus SJ1] gi|301053058|ref|YP_003791269.1| diaminopimelate decarboxylase [Bacillus anthracis CI] gi|30255371|gb|AAP25380.1| diaminopimelate decarboxylase [Bacillus anthracis str. Ames] gi|47501861|gb|AAT30537.1| diaminopimelate decarboxylase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178273|gb|AAT53649.1| diaminopimelate decarboxylase [Bacillus anthracis str. Sterne] gi|164713885|gb|EDR19407.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0488] gi|167512661|gb|EDR88035.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0193] gi|167530292|gb|EDR93018.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0442] gi|170128893|gb|EDS97759.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0389] gi|170669167|gb|EDT19910.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0465] gi|172082837|gb|EDT67900.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0174] gi|190560807|gb|EDV14782.1| diaminopimelate decarboxylase [Bacillus anthracis Tsiankovskii-I] gi|218537180|gb|ACK89578.1| diaminopimelate decarboxylase [Bacillus cereus AH820] gi|227003325|gb|ACP13068.1| diaminopimelate decarboxylase [Bacillus anthracis str. CDC 684] gi|229264610|gb|ACQ46247.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0248] gi|298724057|gb|EFI64760.1| diaminopimelate decarboxylase [Bacillus cereus SJ1] gi|300375227|gb|ADK04131.1| diaminopimelate decarboxylase [Bacillus cereus biovar anthracis str. CI] Length = 438 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429 >gi|268611237|ref|ZP_06144964.1| diaminopimelate decarboxylase [Ruminococcus flavefaciens FD-1] Length = 432 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 68/401 (16%), Positives = 129/401 (32%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D++ + +N K ++ A K F+ M + G + S Sbjct: 30 GTPLYVMDEEMVRSNCSRFRDSMKKFYGEKGEVHYAGKAFSCMEMCRIVASEGIGLDAVS 89 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E+ F E ++ K + II + +S+L++ + A K Sbjct: 90 IGELYTALKAGFPMEKIGFHGNNKTDAELEFAVDNGVGHIIVDNISELHRLEAIAAAKGK 149 Query: 117 KIGLR--INPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHN 165 K + I P + + S+ G + + + E + GL H Sbjct: 150 KPAVMFRIKPGIDAHTHDFVKTGQIDSKFGFALETGEAFDAVKEALSCENLTLAGLHCHI 209 Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKDF------- 214 + F K + ++ + ++LGGG + Sbjct: 210 GSQIFDIAPFEEAAKVMLGFIAKIKAELGYEVPGLNLGGGFGIKYMEKDDPQPFEVFLER 269 Query: 215 -CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLD------ISENIKNLVIVDSS 264 +K EK +Y+EPG +I TV I I + S Sbjct: 270 VSAVVKGECEKLGLTQPFMYIEPGRSIAAPAGLTLYTVGARKEIPNIRTYISVDGGMADS 329 Query: 265 VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + A + G+ C +GD+ GE + + GD I+ Sbjct: 330 PRYILYKSEYEAIVANKANEERTEKVTIAGKCCESGDLIGENMSLQHAESGDIIAVCATG 389 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N + P + N + A++ + +D N Sbjct: 390 AYNYSMSSNYNRLQKPAVVFVNKGTSRIAVKRETLDDIIRN 430 >gi|325283598|ref|YP_004256139.1| Diaminopimelate decarboxylase [Deinococcus proteolyticus MRP] gi|324315407|gb|ADY26522.1| Diaminopimelate decarboxylase [Deinococcus proteolyticus MRP] Length = 414 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 59/395 (14%), Positives = 120/395 (30%), Gaps = 29/395 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP++L D++ + N + G + A+K + L + G SSL Sbjct: 19 LPTPFHLYDERGMRENARAFMQAFAWAPGFRNYYAVKAAPTPALLQILAEEGFGADCSSL 78 Query: 61 YEVMLG-HEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ L GE + E I + ++ + ++ ++ Sbjct: 79 PELELAQRCGITGENIMFTSNDTPPEEFRRAAELGAVINLDDITHIAALEEALGGTLPEL 138 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENK---- 170 N ++ G + ++ ++ K V H + Sbjct: 139 LSFRYNPGPERTGNAIIGNPVEAKYGVTSEQLLDCYRTAQDKGVGRFALHTMVASNELDA 198 Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + ++E+++LGGGI + Q + + + Sbjct: 199 SFIIETARMLFTLAVRLKEELGIELEFVNLGGGIGIPYRPEQQAMSYQEVSDGIRELYDS 258 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I E G + L + V ++ K+ V +D+ + + + Sbjct: 259 IIRPAGLDGLKLSFECGRVMTGPYGVLVSRVRHVTRKYKDYVGLDACMANLMRPAMYGSY 318 Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 N G T V G C D F ++ GD + D + + Sbjct: 319 HHITVLNKGEDAPRQTVDVTGSLCENNDKFAIDRELPVMQPGDVVVIHDAGAHGHSMGFN 378 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNLS 367 +NG + DG + IR + +D + LS Sbjct: 379 YNGKLRSAEYLLRADGRAEMIRRAETMDDLFATLS 413 >gi|313123902|ref|YP_004034161.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280465|gb|ADQ61184.1| Diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 436 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 127/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP + D K+ + + + GV ++ A K F+ ++ +N+ T S Sbjct: 31 QTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLAIYQVINEEGGHTDVVSS 90 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + +++ K + II + +++ + Sbjct: 91 GELWTAMKAGFPMDKVSFHGNNKSRAELEMAVDQGVGVIILDNFHEIDLLSQILEEKDAS 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 K+ LR+ P +S + S+ G + + + + G+ H Sbjct: 151 SKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALELVLANPRMKMAGIHAHIG 210 Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----- 217 + F + + + + +++GGG D + Sbjct: 211 SQIFDVRGFVGCADKLCQLASAWKEKYGYETDILNVGGGFGIHYTDQDQPLPAEEFVRAI 270 Query: 218 ---LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 +K ++ + I++EPG +IV TV + V + ++ Sbjct: 271 VKEVKSKCQENNLKLPAIWIEPGRSIVGPAGFSLYTVGSRKDLPGYPSYVALDGGMGDNI 330 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + + + G+ C +GDI + + GD ++ Sbjct: 331 RPALYQAEYSAVVADRPQAEDEERVNLVGKYCESGDILIKSCPLPKTEPGDVVALLSTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + I+ SY+D N Sbjct: 391 YGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAN 430 >gi|193213915|ref|YP_001995114.1| diaminopimelate decarboxylase [Chloroherpeton thalassium ATCC 35110] gi|193087392|gb|ACF12667.1| diaminopimelate decarboxylase [Chloroherpeton thalassium ATCC 35110] Length = 417 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 68/386 (17%), Positives = 123/386 (31%), Gaps = 23/386 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P ++ K +L+ ++ ++K + L G +S E Sbjct: 29 GSPVFVTSKASILSQYHAFEEAFQSLNHLTCYSVKANYNLEVIKVLVDAGCGFDVNSGGE 88 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHKK 117 + K E + I + S+L + A L Sbjct: 89 LFRALKAGAEPSKIIMAGVGKTAEEIEYALSTGIMMIKAESQSELILINEIAKKNNLVAP 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCENK 170 +G+R+NP+V + G E E N+ GL H + Sbjct: 149 VGIRVNPNVLAETHPYITTGDSEEKFGIDETLAEETFSLIKRLENLNLIGLDMHIGSQIF 208 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 L + ++ +IE I +GGG T P+ +F ++L Sbjct: 209 DTLPYYEATLKLLGVKNIAESMGFEIEHIDIGGGFPVTYNAEKPATPIAEFAKKLVPILS 268 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYLLYQESATI 281 + ++ EPG +V N + L T VL +N K+ + VDS++ + L + Sbjct: 269 NLNAKVIFEPGRYMVANASVLLTKVLYRKQNYKDKIFLIVDSAMTELLRPSLYKSHHDVL 328 Query: 282 YPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 A + G C +GD F V+ G+ ++ Y + +N Sbjct: 329 AVAKKDNEILADIVGPVCESGDFFARARKVGDVQEGELLAVMSSGAYGSVMGSNYNARLK 388 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + D + SY N Sbjct: 389 PAEVLVSGDAHKLIRKRESYEQLIQN 414 >gi|269128137|ref|YP_003301507.1| diaminopimelate decarboxylase [Thermomonospora curvata DSM 43183] gi|268313095|gb|ACY99469.1| diaminopimelate decarboxylase [Thermomonospora curvata DSM 43183] Length = 461 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 123/398 (30%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D++ + + + A K F + L++ G + E Sbjct: 61 GTPLYVYDEEDVRQRAREYATAFQ--DGSVHYAGKAFLCTALLRWLDEEGLGLDVCTGGE 118 Query: 63 VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + + F E + + K A+ + ++ ++ ++ + AQ+ K Sbjct: 119 LAVALAAGFPPEKITMHGSNKSLAELERALEAGVGRVVIDSFEEIARLGYLAQEKGARPK 178 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + ++ + GL H + Sbjct: 179 VMIRVTTGVEAHTHEFIATAHDDQKFGFSRTTGAALEAVRRVLQLPQLELVGLHSHIGSQ 238 Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F + ++ ++ + LGGG + + + ++ Sbjct: 239 IFDTDGFEVAAHRLAEQLVAIRDEHGLELPELDLGGGYGIAYVPGDEPHDPKAIADSLKE 298 Query: 225 Y-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 +I +EPG AIV V + + + V VD + ++ Sbjct: 299 IVARECRAYGLAMPRITVEPGRAIVGPGGVTLYEVGTVKDVEGLRTYVSVDGGMSDNLRT 358 Query: 272 YLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + P + + G+ C +GDI + V GD ++ Y Sbjct: 359 ALYGAEYTCVLASRSSRAEPMLSRLVGKHCESGDIVVRDLWLPRDVTAGDVVAVAATGAY 418 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + IR + D Sbjct: 419 CRSMASNYNFVPRPAVVAVRDGKARVLIRRETEEDLLR 456 >gi|295677895|ref|YP_003606419.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1002] gi|295437738|gb|ADG16908.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1002] Length = 420 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 119/387 (30%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + +A+K + + + + G S E Sbjct: 28 GTPLYVYSRAALTAAWNAYAGACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + E ++ K DA+++ ++ +L++ A Sbjct: 88 LARVLAAGGKAENTVFSGVGKQASEMRDALVAGVKCFNVESIPELDRLNAVAGEMGKKAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+NP V ++ G +D V G+ H + Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKTNKFGVAFEDARATYQAAAAMANLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + ++ I I +GGG+ T D + + ++ ++ Sbjct: 208 EVAPYLDAIDKVLELVEQIEQDGVSIRHIDVGGGLGITYDDETPPEIGEFVRTVLDRIEA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 ++Y EPG ++V N L T + + KN IVD+++ + Sbjct: 268 RGHGHREVYFEPGRSLVGNAGVLLTRLEFLKPGEDKNFAIVDAAMTDLARPAMYDAYHAI 327 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + + V G C +GD G V+ GD ++ Y + +N Sbjct: 328 EPVVKRDVPAHVYDVVGPVCESGDWLGRERLLA-VEPGDLLAIRSAGAYGFVMSSNYNTR 386 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + Sbjct: 387 ARAAEVMVDGTQAHVVRAREEVKQLFA 413 >gi|196042182|ref|ZP_03109464.1| diaminopimelate decarboxylase [Bacillus cereus NVH0597-99] gi|196026955|gb|EDX65580.1| diaminopimelate decarboxylase [Bacillus cereus NVH0597-99] Length = 438 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQNGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429 >gi|89073050|ref|ZP_01159597.1| carboxynorspermidine decarboxylase [Photobacterium sp. SKA34] gi|89051268|gb|EAR56724.1| carboxynorspermidine decarboxylase [Photobacterium sp. SKA34] Length = 366 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 171/361 (47%), Positives = 242/361 (67%), Gaps = 3/361 (0%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 ID+QKL+NNL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS +EV LG E Sbjct: 2 IDEQKLINNLEQAKKLKQLSGVKLVLALKCFSTWGVFDVMKPYLDGTTSSGPFEVRLGAE 61 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 KFGGETHAY+V Y +++ VL C+ IIFN+VSQL + A +GLR+NP +S Sbjct: 62 KFGGETHAYSVGYSQEDVEEVLQYCNKIIFNSVSQLQANRHLADGKAS-VGLRLNPGISC 120 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188 + LADP R +SRLG + I+ +++G MFH NCENKS F A+L +I + FG Sbjct: 121 AGQDLADPARQYSRLGVQENLLIDELFDDLDGAMFHMNCENKSADAFIALLDSISERFGR 180 Query: 189 FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 ++ +++W+SLGGG+ FT DY ++ LK F+E++ VQ+YLEPGEAI+T TT L TV Sbjct: 181 YLEKLDWVSLGGGVFFTWPDYELEKLAAALKIFAERFDVQLYLEPGEAIITQTTDLAVTV 240 Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAGDIFGEF 306 +DI EN IVDS+ EAH D L+Y E ATI G + ++ SCLAGD F Sbjct: 241 VDIVENGIKTAIVDSATEAHRLDTLIYNEPATISEASEKGNHQYVIGSCSCLAGDQFCVA 300 Query: 307 HFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 +FE+P+ IG ++ D AGY + + NWFNG+ MP+I + +DG ++ + EF+Y D+ ++L Sbjct: 301 NFEQPLAIGQKLHIADSAGYTMVKLNWFNGLRMPSIYCRRIDGAVEKLNEFTYQDFESSL 360 Query: 367 S 367 S Sbjct: 361 S 361 >gi|320008557|gb|ADW03407.1| diaminopimelate decarboxylase [Streptomyces flavogriseus ATCC 33331] Length = 463 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 116/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D+ + + A K F + + L + S E Sbjct: 63 GTPAYFLDESDFRARCRAWVDAF-GTDADVFYAGKAFLSRAVVRWLAEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E A++ K I+ ++ ++ + AQ+L + Sbjct: 122 LATALDAGMPAERIAFHGNNKTVAEIERAVGAGVGRIVLDSFQEIARVSHIAQRLGTRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 +R+ V + G D + + + G+ H + Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIALADGQAAEAVRRALTLDGLELIGIHSHIGSQ 241 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +++ + + ++ I LGGG+ + + Sbjct: 242 IFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALGD 301 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +I +EPG AIV T V I + V VD + ++ Sbjct: 302 IVTRECESAGLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + + P V G+ C +GDI + F + GD I+ Y Sbjct: 362 ALYDAEYSVALVSRSSDAEPMLVRVVGKHCESGDIVVKDAFLPSDLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVRDGQARVIVRRETEEDLLR 459 >gi|217031512|ref|ZP_03437017.1| hypothetical protein HPB128_21g70 [Helicobacter pylori B128] gi|298736763|ref|YP_003729293.1| diaminopimelate decarboxylase [Helicobacter pylori B8] gi|216946712|gb|EEC25308.1| hypothetical protein HPB128_21g70 [Helicobacter pylori B128] gi|298355957|emb|CBI66829.1| diaminopimelate decarboxylase [Helicobacter pylori B8] Length = 405 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNSLQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K V+VD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD+I+ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKDARLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|238021782|ref|ZP_04602208.1| hypothetical protein GCWU000324_01685 [Kingella oralis ATCC 51147] gi|237866396|gb|EEP67438.1| hypothetical protein GCWU000324_01685 [Kingella oralis ATCC 51147] Length = 403 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 124/385 (32%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + A+K + Q G + S E Sbjct: 14 GTPLYVYHQAALTAAFAAYQTAFSGCQPLVCYAVKANGNLSVIRHFAQLGSGFDTVSAGE 73 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K N ++ +L + D A +L K Sbjct: 74 IARVLAAGGDASKIIFSGVGKTEAEMEYALNAGIKCFNVESLPELERLNDVAGRLGKIAP 133 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I RINP V ++ G +D ++ + G+ H + Sbjct: 134 ISFRINPDVDAKTHPYISTGLKANKFGIAMRDAEQAYQRAASLPHIKIIGVDCHIGSQLT 193 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 A + + + ++ + LGGG+ KD + + Q ++ + Sbjct: 194 DLSPLIAACERLIALIDKLSAQGIALQHLDLGGGVGIVYKDEHTPDLHAYAQAVEPLLKA 253 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA---T 280 + + LEPG ++V N L T V + KN V+VD+++ + L A Sbjct: 254 RGLSLVLEPGRSLVGNAGVLLTRVEYVKHGEEKNFVVVDAAMNDLMRPALYQAYHAVENV 313 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P+ TA + G C GD G+ + GD ++ Y + + +N Sbjct: 314 SRPDAPQITADIVGPICETGDFIGKERQIGAAQ-GDILAIRSAGAYASSMASNYNARCRA 372 Query: 341 TIAVKNVDG-TIKAIREFSYNDYYN 364 + + G + R + +D Sbjct: 373 AEVMIDEQGNSRLVRRRETMDDLLA 397 >gi|330469869|ref|YP_004407612.1| diaminopimelate decarboxylase [Verrucosispora maris AB-18-032] gi|328812840|gb|AEB47012.1| diaminopimelate decarboxylase [Verrucosispora maris AB-18-032] Length = 461 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 119/398 (29%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ L + + A K F + + + S E Sbjct: 62 GTPVYVLDEGDLRSRCRDFRAAFPTED--VYYAGKAFLCRAVVRMIAEEGMFLDVCSGGE 119 Query: 63 VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + + E ++ K A+ + II ++ +++++ A++ + + Sbjct: 120 LAVALAAGMPPERIGFHGNNKSEAELRRALDAGVGRIIVDSFAEIDRLTALARERAVRPR 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK---------NVNGLMFHNNCE 168 + +R+ V + G + GL H + Sbjct: 180 VLIRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAIAAALRILDEGVLELRGLHSHIGSQ 239 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKE 220 F +L + ++ + LGGG D +RL++ Sbjct: 240 IFDTSGFEVSARRVLALQAQIRDARGVELPELDLGGGFGIAYTSQDDPAAPHDLAKRLRK 299 Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + + +EPG AIV V + + V + ++ Sbjct: 300 IVDSECAAEQLAVPHLSIEPGRAIVGPAVFTLYEVGTVKDVDGIRTYVSVDGGMSDNIRT 359 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L A+ P A V G+ C +GDI + F V+ GD ++ Y Sbjct: 360 ALYDASYSATLASRASTAEPMLARVVGKHCESGDIVVKDEFLPADVQPGDLVAVPGTGAY 419 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + +R + D Sbjct: 420 CRSMASNYNHVPRPPVVAVRDGQARLIVRRETEADLLA 457 >gi|114326793|ref|YP_743950.1| diaminopimelate decarboxylase [Granulibacter bethesdensis CGDNIH1] gi|114314967|gb|ABI61027.1| diaminopimelate decarboxylase [Granulibacter bethesdensis CGDNIH1] Length = 448 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 56/384 (14%), Positives = 112/384 (29%), Gaps = 26/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ AG + A+K + L G S Sbjct: 49 GTPCWVYSAGTFRRRYRLLRDALAEAGIAPHIHFAVKANDHLAVLRLLGNEGAGADVVSG 108 Query: 61 YEVMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ GE ++ K A+ I + +L A + + Sbjct: 109 GELSRARAAGIPGERIVFSGVGKTAAELTLALSEGIAQINVESAEELEMLSAIACGMGRT 168 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVN--GLMFHNNCE 168 LR+NP V ++ G + D + + + GL H + Sbjct: 169 ARIALRVNPDVDAGTHPKITTGLADNKFGIQAGDVPALYARAASLPGIEPVGLAMHIGSQ 228 Query: 169 NKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFS 222 F A + + + + + GGG+ + +K Sbjct: 229 INVMTPFLAAFRRMAILVQALRDQGLTVRLVDCGGGLGIDYRGDVTSTPAALAGAMKAEL 288 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES--- 278 VQ+ LEPG + L ++V+ + ++ +V D+++ + L Sbjct: 289 GGLDVQLVLEPGRWLAGPAGVLLSSVVLVKQSRPRPFVVLDAAMNDLLRPSLYEAWHGIV 348 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + P V G C GD F P++ G R++ + Y + +N Sbjct: 349 PLSAVEAAHMPIDCDVVGPVCETGDTFARSRSLPPLQGGSRVAILEAGAYGAVMSSTYNA 408 Query: 337 INMPTIAVKNVDGTIKAIREFSYN 360 + + + + + Sbjct: 409 RPLAAQVLVDDGHWAVIRPRQTVD 432 >gi|255523462|ref|ZP_05390431.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7] gi|296184745|ref|ZP_06853156.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7] gi|255512920|gb|EET89191.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7] gi|296050527|gb|EFG89950.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7] Length = 432 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 127/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID+ + + ++ A K F M +N S Sbjct: 29 GTPLYVIDEALVREQCKRYYKAFNVEQGENRVAYAGKAFLTLAMCQMINSEGLYLDVVSG 88 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLH-- 115 E+ + F E ++ K E + + + +++K A++ + Sbjct: 89 GELYTALKSDFPMEKVYFHGNNKTLEEIEMGISLGVGRFVVDNFDEIDKINAVAKEKNKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK---------IESEIKNVNGLMFHNN 166 + I LRI P + + S+ G + IE + GL H Sbjct: 149 QSILLRITPGIEAHTHDYIKTGQIDSKFGFTMLEHNTMNAVKKSIELTNIELKGLHCHIG 208 Query: 167 CENKSFLCFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + + ++ + + +++ + LGGG K+ Sbjct: 209 SQIFDIKPYEDEVEIMLSIVKSIKDEMGYELKELDLGGGFGIYYKEGDTPQKIEDFCEII 268 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + ++ +EPG +I+ N + TV I E + + ++ Sbjct: 269 LSKAESVGKELGIKLPKLVIEPGRSIIGNAGSTLYTVGSIKEIPGIRKYISVDGGMTDNI 328 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + + V G+ C +GDI K+GD + + Sbjct: 329 RPALYNAEYECVVADKVESEFTERVSVAGKCCESGDILLNGIEIPEAKVGDIMVVLNTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + R +++ N Sbjct: 389 YGYSMSNNYNKIPKPAVVLVKDEEVKVICRRQNFDQILEN 428 >gi|119357521|ref|YP_912165.1| diaminopimelate decarboxylase [Chlorobium phaeobacteroides DSM 266] gi|119354870|gb|ABL65741.1| diaminopimelate decarboxylase [Chlorobium phaeobacteroides DSM 266] Length = 435 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 117/386 (30%), Gaps = 23/386 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ K+ L+ + ++K + T + G +S E Sbjct: 47 GTPLFVTSKKNLITRYNEFEEAFSGLPHFTCYSVKANFNLSVIKTFGELGCGCDVNSGGE 106 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E + + A+ S + ++S+L A + Sbjct: 107 LYRALQAGVSPEKIIFAGVGKKAEEIAYALRSGVLMLKAESLSELAVIDRIAAESGNVAL 166 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 +RINP+V+ + G + E + + GL H + Sbjct: 167 VAIRINPNVTAETHPYITTGDSKEKFGIDEGELDAVLMLLSELKHVRLAGLDMHIGSQIF 226 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSE 223 + A + IE+ +GGG T P+ F ++L Sbjct: 227 DPEYYVAATIKLLAILERVKAQGFAIEYFDIGGGFPVTYDPAKQATPIAQFAEKLIPLLR 286 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLYQESAT- 280 V++ EPG +V N + L T +L +N K IVD+ + + L Sbjct: 287 PAGVKVIFEPGRFLVANASVLLTRILYRKQNHTGKQFFIVDAGMTELIRPALYQSHHEVL 346 Query: 281 -IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + A V G C + D F G+ ++ Y + +NG Sbjct: 347 AVTRHKESVEADVVGPVCESSDFFARHRTIDDAAEGELLAVMSSGAYAAVMSSNYNGRLR 406 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + +Y N Sbjct: 407 PAEVLVDGQDVRLVRTRETYEQLIQN 432 >gi|15644918|ref|NP_207088.1| diaminopimelate decarboxylase (dap decarboxylase) (lysA) [Helicobacter pylori 26695] gi|2499346|sp|P56129|DCDA_HELPY RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|2313384|gb|AAD07356.1| diaminopimelate decarboxylase (dap decarboxylase) (lysA) [Helicobacter pylori 26695] Length = 405 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 122/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIETIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLS 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNSLQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K V+VD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396 >gi|319778683|ref|YP_004129596.1| Diaminopimelate decarboxylase [Taylorella equigenitalis MCE9] gi|317108707|gb|ADU91453.1| Diaminopimelate decarboxylase [Taylorella equigenitalis MCE9] Length = 428 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 54/388 (13%), Positives = 114/388 (29%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++P+ L K+ + + D I K + A+K + + G S Sbjct: 35 ESPFVLYSKKAIESAWDGYKNILGKYPNSLICYAVKANSNLSLLKLFVSLGAGFDIVSGG 94 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ E ++ K A+ S + +L A++L K Sbjct: 95 ELKRCLEVGADTNKIIFSGVGKQSWEIKLALESGIKCFNVESEFELENIATIARELGLKA 154 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 LR+NP + ++ G ++ + + G+ H + Sbjct: 155 RISLRVNPDIDARTHPYISTGLKENKFGIDFSRALDVYLYAASIDALEIVGIDCHIGSQI 214 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 + + ++ + + +GGG+ + D K Sbjct: 215 LEIEPYLDAADRVIELIRQIRSHGIYLSHLDIGGGVGIRYSNENPIDIVCLRASIDAKLR 274 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES- 278 + + +EPG ++V N+ L VL I + I+++ + + L Sbjct: 275 SAGLEHMLVIMEPGRSLVGNSAILVAQVLGIKKTDYKNFAIINAGMNDLIRPSLYEAYHG 334 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + G C GD + ++ GD I E V Y + + +N Sbjct: 335 VLPVQIRKGEATKYDIVGPICETGDWLAKDRKLV-LQAGDLIVIESVGAYGTSMASNYNS 393 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D + Sbjct: 394 RPFLAEYLVDDAELCMIRKAQGLEDIWR 421 >gi|255534252|ref|YP_003094623.1| Diaminopimelate decarboxylase [Flavobacteriaceae bacterium 3519-10] gi|255340448|gb|ACU06561.1| Diaminopimelate decarboxylase [Flavobacteriaceae bacterium 3519-10] Length = 399 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 120/385 (31%), Gaps = 26/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + + + + + A K + + + S+ E Sbjct: 14 GTPTYVYDAESIKEQYEKLTSSFHKS-TRFFYACKALSNINILKYVKNLGGSLDCVSINE 72 Query: 63 VMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V LG F + + D EI+ ++ I + +S L +F +K I + Sbjct: 73 VKLGLKAGFEAKKILFTPNCVDLAEIEEAMALNVHINIDNISILEQFGNKYGG-SYPIFV 131 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCENKSFLC 174 RINP + S+ G E NV GL H E K Sbjct: 132 RINPHIFAGGNYKISTGHIDSKFGISIHQLRHIERVMKTTNLNVEGLHMHTGSEIKDPDV 191 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224 F L + E ++++ +G G ++ ++ + L + EK Sbjct: 192 FLQGLDIM-FELAEHFPNLKYLDMGSGFKVPYQEGDIETDVKTLGKKVEKALSEFSKSSG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLL--YQESATI 281 +++ EPG+ +V+ + L I + ++S + Y + + Sbjct: 251 KKFELWFEPGKYLVSKSGNLLVKTNVIKQTTATVFAGINSGFNHLIRPMFYDSYHKIDNL 310 Query: 282 YPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 G V G C D F + GD + F + Y + FN P Sbjct: 311 SNPKGAQRIYTVVGNICET-DTFAWDRKLNETREGDVLVFRNAGAYGFEMSSNFNSRLKP 369 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + R + D N Sbjct: 370 AEVLFLDGAAHLIRRRDEFEDLLKN 394 >gi|317011876|gb|ADU82484.1| carboxynorspermidine decarboxylase [Helicobacter pylori Lithuania75] Length = 405 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +GVK+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGVKVLLALKGYAFWREFGILRQRLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSGFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++EK F ++ + W++ GGG H T DY V Q +++F Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIRDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 LKISVENDEELIEIEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404 >gi|282861110|ref|ZP_06270175.1| diaminopimelate decarboxylase [Streptomyces sp. ACTE] gi|282563768|gb|EFB69305.1| diaminopimelate decarboxylase [Streptomyces sp. ACTE] Length = 463 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 115/398 (28%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ A + A K F + + L + S E Sbjct: 63 GTPAYILDESDFRARCRAWADAF-GADADVFYAGKAFLSRAVVRWLTEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E A++ K I+ ++ ++ + AQ L K+ Sbjct: 122 LATALDAGMPVERIAFHGNNKTAAEIERAVSAGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 +R+ V + G + + + + G+ H + Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRRALTLDGLELIGIHSHIGSQ 241 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +++ + + ++ I LGGG+ + + Sbjct: 242 IFDMAGFEVSARRVVQLLAEIRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALGD 301 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG A+V T V I + V VD + ++ Sbjct: 302 IVTRECESAGLATPRISVEPGRAVVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + + P V G+ C +GDI + F + GD I+ Y Sbjct: 362 ALYDAEYSVSLVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVRDGQARVIVRRETEEDLLR 459 >gi|78189076|ref|YP_379414.1| diaminopimelate decarboxylase [Chlorobium chlorochromatii CaD3] gi|78171275|gb|ABB28371.1| diaminopimelate decarboxylase [Chlorobium chlorochromatii CaD3] Length = 418 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 66/387 (17%), Positives = 117/387 (30%), Gaps = 24/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ L+ + + + ++K + T G +S E Sbjct: 29 GTPLYVTSERSLIESYEAFERAFQPLHHFTCYSVKANYNLSVIKTFAALGCGCDVNSGGE 88 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKA--QKLHKK 117 + + + K E A ++ +VS+L+ A Q Sbjct: 89 LYRSLQAGVAPDQIIFAGVGKKYEEIAYALESGVLMLKAESVSELHVINRIAAEQGKIAS 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170 I LRINP+V+ + G D + + GL H + Sbjct: 149 IALRINPNVTAETHPYITTGDSKEKFGIDEADLADLFALIRQLPHVRLIGLDMHIGSQIF 208 Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + A + F +E++ +GGG T P++ F ++L + Sbjct: 209 DPEYYVAATTKLLALFNLSKSMGFALEYLDIGGGFPVTYTDTKHATPIERFAEKLVPLLQ 268 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV--EAHVPDYLLYQESAT- 280 V + EPG +V N + L T +L N + L Sbjct: 269 PLGVTVIFEPGRYLVANASVLLTRILYRKRNHVGKEFFVVDAGLTELIRPALYQSHHEVQ 328 Query: 281 -IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + A V G C + D F V G ++ Y + +NG Sbjct: 329 AVQRQEASVIADVVGPVCESSDFFARQRELDAVPEGGLLAVMSCGAYASVMGSNYNGRLR 388 Query: 340 PTIAVKNVDGTIKA-IREFSYNDYYNN 365 P + +G + R S+ N Sbjct: 389 PAEVMVRRNGEVVLTRRRESFEQLIQN 415 >gi|65318785|ref|ZP_00391744.1| COG0019: Diaminopimelate decarboxylase [Bacillus anthracis str. A2012] Length = 438 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 90 GELYTALQAGFPASRIHFHGNNKXEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429 >gi|149911628|ref|ZP_01900239.1| probable diaminopimelate decarboxylase protein [Moritella sp. PE36] gi|149805298|gb|EDM65312.1| probable diaminopimelate decarboxylase protein [Moritella sp. PE36] Length = 441 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 68/400 (17%), Positives = 135/400 (33%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y K LLNN+ + + + A+K + + + + G S+ Sbjct: 33 VATPFYCYSKAALLNNIHACKAAFEAENIHIHYAMKANSNLSLLRIVAEQGLGVDIVSIG 92 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E+ F + ++ K AVL+ + +L A K + Sbjct: 93 EMHRALSAGFDAQDIVFSGVGKTTAELTAAVLAGVGQFNLESKEELAVLITIANKHQQLL 152 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169 +R+NP V+ ++ G + S +NGL H + Sbjct: 153 SALIRVNPEVTVDTHKNITTGAKGNKFGVNFDAVLPMLETAKHSPFIQINGLAMHIGSQI 212 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV--------------- 211 + + + I+ + + LGGG KD+ + Sbjct: 213 HTTAPYLDAIAKIQTLISELKTQGYPLTELDLGGGFGVQYKDHQMLTSNTGGSGSDSLAF 272 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVP 270 DF Q ++ + +I +EPG ++V + + + + I E+ +V D+++ + Sbjct: 273 SDFSQAIRSALPHWQGRISIEPGRSLVADIGVMVSEITYIKESQPTSFVVLDAAMNDLMR 332 Query: 271 DYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVA 324 LYQ + + P P+T V G C + D F + + GD + F Sbjct: 333 PA-LYQATHALIPVKSPFTSRLTEYDVVGPICESTDTFAKSAQLPNDLAAGDLMCFLYTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y N +N + + + D + + + Sbjct: 392 AYCAVMSNSYNSRPIAAEVLVDDDQAYVIRQAITQENLIA 431 >gi|317179313|dbj|BAJ57101.1| diaminopimelate decarboxylase [Helicobacter pylori F30] Length = 405 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L + G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLARLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYKIVFSGVGKSELEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSTFLEPISVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPCGGCKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396 >gi|225019949|ref|ZP_03709141.1| hypothetical protein CLOSTMETH_03903 [Clostridium methylpentosum DSM 5476] gi|224947313|gb|EEG28522.1| hypothetical protein CLOSTMETH_03903 [Clostridium methylpentosum DSM 5476] Length = 432 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 65/401 (16%), Positives = 118/401 (29%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ + N + A K F ++ + G S Sbjct: 30 GTPLYVVDEDLVRENCRLFKDSIDRYYGGRGLVCYASKAFCCKEIYRVMEDEQIGVDVVS 89 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKL 114 + E+ F E ++ K + II + +++L + A Q Sbjct: 90 IGEIYTALAAGFPAEKMCFHGNNKTAGELYYALENGVGRIIVDNLNELERLNALAAEQGK 149 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHN 165 I LR+ P + + S+ G E K+ E N+ G H Sbjct: 150 RPNILLRVKPGIDAHTHSFIRTGQIDSKFGFAIETGEALEAAKEASAMEHVNLVGAHCHI 209 Query: 166 NCENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221 + F + + ++ ++LGGG D R E Sbjct: 210 GSQIFDIDPFVLAAEVMMGYIAAVKKETGVELTDLNLGGGFGIKYTDEDHPVPYDRYMEQ 269 Query: 222 SEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAH 268 I LEPG +I+ TV E +D + + Sbjct: 270 VSAKVKEEAARLGLKVPFILLEPGRSIIGPAGITLYTVGARKEIPDIRTYLSIDGGMTDN 329 Query: 269 VPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 L + + N + G+ C +GD+ GE + GD ++ Sbjct: 330 PRYALYQSKYDVVLANKANQPKDDIITLAGKCCESGDLIGEGLKIQRGDAGDIVAVLATG 389 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + +N + P + + ++ + D N Sbjct: 390 AYNYAMSSNYNRVTKPAVVFVRNGQSRLVVKRETLEDLVRN 430 >gi|256785194|ref|ZP_05523625.1| diaminopimelate decarboxylase [Streptomyces lividans TK24] gi|289769087|ref|ZP_06528465.1| diaminopimelate decarboxylase [Streptomyces lividans TK24] gi|289699286|gb|EFD66715.1| diaminopimelate decarboxylase [Streptomyces lividans TK24] Length = 463 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 63/398 (15%), Positives = 119/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL+D+ + + A K F + + L++ S E Sbjct: 63 GTPAYLLDEADFRERARAWRTAFGD-DADVFYAGKAFLSRAVVRWLDEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E A++ + AV + I+ ++ ++ + AQ L K+ Sbjct: 122 LATALSAGMPAERIAFHGNNKSPEEIERAVRAGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 +RI V + G + ++ + V G+ H + Sbjct: 182 VQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALKLDGLEVIGIHSHIGSQ 241 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F ++ ++ I LGGG+ + + + Sbjct: 242 IFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALTE 301 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG AIV T V + + V VD + ++ Sbjct: 302 IVTRECEAARLATPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGY 326 L E A+ + P V G+ C +GDI + F + GD I+ Y Sbjct: 362 ALYDAEYSVALASRTSDAEPMLVRVVGKHCESGDIVVKDAFLPEDLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVRDGAARVVVRRETEEDLLR 459 >gi|188526831|ref|YP_001909518.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori Shi470] gi|188143071|gb|ACD47488.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori Shi470] Length = 405 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 135/400 (33%), Positives = 210/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N + + +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L ++IFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSVIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S ++ +P SRLG + + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSEFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYRNIEVVLEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 LKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404 >gi|189485646|ref|YP_001956587.1| diaminopimelate decarboxylase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287605|dbj|BAG14126.1| diaminopimelate decarboxylase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 410 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 120/385 (31%), Gaps = 22/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KT Y+ K K++ N + + + A K + + L + G ++S E Sbjct: 24 KTSTYVYSKSKIVTNFENYKKALGSREGLICFACKTNSNGTILKLLAKLGAGADTTSGGE 83 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119 + F Y K E +FN S KI Sbjct: 84 IYRCLKADFDPSKIVYAGVGKTAEEIEYALKSRIFMFNVESFEELDAIDKIAAKIKIKAK 143 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 RINP V + ++ G ++ +++ + G+ H + Sbjct: 144 IAFRINPHVDPDTHSYIITGKKGTKFGIPYEEAVKAYLAAKQKKNIEILGIHSHIGSQIL 203 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224 F +K I ++E+++ GGG+ K ++L Sbjct: 204 DIDSFRLAAQKIKKIVNIVEKNGIKLEYVNFGGGLGVEYKKDQKAPSPKQLISELFPVFD 263 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---AT 280 + + EPG +I+ N L V+ + K+ +I D+ + + L Sbjct: 264 ENKKFIFEPGRSIIANAGHLLVKVIYRKISGGKSFLITDAGMNDLIRPTLYEAYHEILPV 323 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 N V G C +GD G+ V+ G + Y + +N + Sbjct: 324 KMTNDKKVKTDVVGPICESGDFMGKDRMLPFVEQGGYLLITCAGAYGFAMSSEYNSRPLL 383 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + N D T+ + Y D N Sbjct: 384 AEVLVNGDKTMLIRKRAKYEDLLLN 408 >gi|196035356|ref|ZP_03102761.1| diaminopimelate decarboxylase [Bacillus cereus W] gi|195992033|gb|EDX55996.1| diaminopimelate decarboxylase [Bacillus cereus W] Length = 438 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 127/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEVLHDLAVQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD---------KDYPVKD 213 + F ++ + + Q ++ +++GGG + Y Sbjct: 210 SQIFETAGFVRAIEVLHQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 214 FCQRLKEFSEKYSV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 ++F+ + +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVRNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRGNDKNEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429 >gi|116873394|ref|YP_850175.1| diaminopimelate decarboxylase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742272|emb|CAK21396.1| diaminopimelate decarboxylase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 436 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 56/404 (13%), Positives = 127/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ ++ + ++K Sbjct: 92 GELYTAIKADFPPERIHFHGNNKSVEEIHMALDYGIGCFVIDNYYEIDLLENILIERNEK 151 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211 Query: 166 NCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F ++ + + G + ++LGGG + + +++ Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHGTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271 Query: 221 FSEKYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 E+ +I++EPG ++V T V E + + + Sbjct: 272 IMEEVRDVANSNAIAIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 435 >gi|258507107|ref|YP_003169858.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus GG] gi|257147034|emb|CAR86007.1| Diaminopimelate decarboxylase [Lactobacillus rhamnosus GG] gi|259648477|dbj|BAI40639.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus GG] Length = 447 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 130/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D + + + + + AGV + A K FA M++ S Sbjct: 26 QTPLYVYDVGAIRHQIRAFKQVFETAGVAYAVSYASKAFATIAMYEVAKAEAIHVDVVSG 85 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKD--KAQKLH 115 E+ F E +++ K A+ + TII + +L+ + KA Sbjct: 86 GELYTAQAADFPMEKVSFHGNNKSKAELEQALDAGVGTIIVDNFHELDLLDELLKAAVGK 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + + +R+ P +S + S+ G E K + + N+ G+ H Sbjct: 146 QNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESGQADEAAKRILADDHLNLLGIHAHIG 205 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F A+ + + H+ Q + +++GGG + Sbjct: 206 SQIFEVAGFEAVTQKLLAVLDHWHQQFSFTPKVLNVGGGFGIAYTKQDDPLPPEAFVQAI 265 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 +++EPG +IV TV + + V VD + ++ Sbjct: 266 VTTLKTQSHGFNWPLPAVWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + G+ C +GDI + + GD ++ D Sbjct: 326 RPALYQAQYTAVVADHPTAQPTEHVHLVGKYCESGDILIDDAPLPATQPGDVVAVFDTGA 385 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + + +Y D Sbjct: 386 YGYSMASNYNRNPRPAVVFVEDGQAQLVVTRETYADLIQ 424 >gi|21227987|ref|NP_633909.1| diaminopimelate decarboxylase [Methanosarcina mazei Go1] gi|20906414|gb|AAM31581.1| Diaminopimelate decarboxylase [Methanosarcina mazei Go1] Length = 420 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 117/393 (29%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N K+ G K A+K + L + G SSL Sbjct: 21 PTPFHIYDEKAIRENARRMKSAFKDIPGFKEFFAVKALPNPFILKILKEEGFGADCSSLP 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L G+ ++ E I + +S + + A Sbjct: 81 ELILAEKAGMTGDDIMFSSNDTPAEEFIKAKELGGFINLDDISHIPYLEKSAGLPEIVC- 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENK----- 170 + ++ G + E K V H + Sbjct: 140 -FRYNPGPLKEGNAIIGKPEEAKYGFTREQMFEGYRILRDKGVKRFGMHTMVASNELNSD 198 Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + I + Q E+++LGGGI + + + + ++ Sbjct: 199 YFVETARILFELIVEISKELGIQFEFVNLGGGIGIPYRPEQEPVSLEAVAKGVKEAYDAT 258 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 LE G I L + V + K+ V +DS + + + Sbjct: 259 ITANGLAPLKIYLECGRVITGPYGYLISQVRHLKSTYKDYVGLDSCMANLMRPGMYGAYH 318 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F V+IGD ++ D + + Sbjct: 319 HITVFGKEKKAPAHKYDVTGSLCENNDKFAIDRMLPEVEIGDILAIHDAGAHGHAMGFNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG++ IR + DY+ L Sbjct: 379 NGKLRSAELLLREDGSVVQIRRAETIEDYFATL 411 >gi|258545703|ref|ZP_05705937.1| diaminopimelate decarboxylase [Cardiobacterium hominis ATCC 15826] gi|258519073|gb|EEV87932.1| diaminopimelate decarboxylase [Cardiobacterium hominis ATCC 15826] Length = 425 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 127/384 (33%), Gaps = 26/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ D + L ++L A+K + + L G S E Sbjct: 38 GSPLYVYDGDAIRGQFRAYLAHGLPRELQLHFAMKANSNLAILRLLAAEGAGFDIVSGGE 97 Query: 63 VMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K A+ + + ++L + A Sbjct: 98 LARVLQAGGDAAQVVFSGVAKSDAEMQAALAAGIGCFNVESAAELQCLAEVASAMGKVAP 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENK 170 + LR+NP V ++ G +D V G+ H + + Sbjct: 158 VALRVNPDVDAKTHPYISTGMRENKFGVALEDAPALYRWAAVQPSLRVVGVGCHIGSQIR 217 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFSE 223 S F ++ + + LGGG+ D + D + L E Sbjct: 218 SLAPFLQAADSVLTLADALVAEGIALGHVDLGGGLGIETADDFMALTPADLSRALLERVG 277 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + ++++L+PG ++V N L + V+ ++ ++ +++D+++ +V LYQ ++ Sbjct: 278 ERPLRLHLQPGRSLVGNAGLLLSQVVFRKSQSGRDFLMLDAAMNDYVRPA-LYQVRPSLV 336 Query: 283 PNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + PY V G C + D F F + GD + Y + + +N Sbjct: 337 NVSRPYDGVSRMDVVGPVCESSDTFARD-FPICGERGDVVVIPGTGAYGFSMASNYNSRP 395 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 P + R ++ D Sbjct: 396 RPAEVLIEGGQARLIRRRETFADL 419 >gi|153951269|ref|YP_001398641.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. doylei 269.97] gi|152938715|gb|ABS43456.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. doylei 269.97] Length = 402 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 57/383 (14%), Positives = 124/383 (32%), Gaps = 22/383 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ + + K ++ A+K + + L G S+ EV Sbjct: 12 TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71 Query: 64 MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + ++ K + A+ + I + +++ + A++L+ K + Sbjct: 72 KRALKAEAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131 Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168 R+NP+V ++ G + S G+ FH + Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIAKKMYLYAKNSSFLEPVGVHFHIGSQLLD 191 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 + ++ + +E +++ +GGG+ + + + Q + Sbjct: 192 ISPIYEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECEPDLYHYAQGILAQLHG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I +EPG +V + +VL K V+VD ++ + L I P Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311 Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C +GD F + + GD + ++ Y + + +N N Sbjct: 312 YNQAQESLCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVC 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + ++ D Sbjct: 372 ELALEEGQVRLIRQRENFEDQIA 394 >gi|325285021|ref|YP_004260811.1| diaminopimelate decarboxylase [Cellulophaga lytica DSM 7489] gi|324320475|gb|ADY27940.1| diaminopimelate decarboxylase [Cellulophaga lytica DSM 7489] Length = 416 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 69/384 (17%), Positives = 118/384 (30%), Gaps = 27/384 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 P Y+ D +K+++ K +KL A K + + +N G + S+ EV Sbjct: 16 PVYVYDSEKIVSQYQRLTNAFKGVKKLKLNYAAKALSNISILRLMNSLGSGLDTVSIQEV 75 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 LG F E+ Y E + I + +S L +F K + + +R Sbjct: 76 ELGLLAGFKPESIIYTPNGVSLEEIEKAAALGVRINIDNLSVLEQFGSK--HPNIPVCIR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175 INP V S+ G N+NG+ H + F Sbjct: 134 INPHVMAGGNSNISVGHIDSKFGISIHQIPHLLRIVDLTKMNINGIHMHTGSDILDIDVF 193 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230 + I E +++I G G K ++ + L + Sbjct: 194 LYASE-ILFETAKNFKNLDFIDFGSGFKVPYKTGDIETNVEELGQKLSAKFNDFCKEYGK 252 Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESATIY 282 EPG+ +V+ + V + + +DS + L E I Sbjct: 253 ELTLAFEPGKFLVSESGFFLAKVNVVKQTTSTVFASIDSGFNHLIRPMLYGSSHEILNIS 312 Query: 283 PNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 G V G C D F + GD + F + Y + +N P Sbjct: 313 NPEGRERYYSVVGYICET-DTFASNRRINEISEGDILCFRNAGAYCFTMASNYNSRFRPP 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365 + + I +++D N Sbjct: 372 EVLWHNGEAILIRERETFDDLIKN 395 >gi|297379512|gb|ADI34399.1| diaminopimelate decarboxylase [Helicobacter pylori v225d] Length = 405 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 122/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFDKIKQAFLNYKKAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDRQIRVIRKREALEDLWR 396 >gi|194290982|ref|YP_002006889.1| diaminopimelate decarboxylase protein [Cupriavidus taiwanensis LMG 19424] gi|193224817|emb|CAQ70828.1| DIAMINOPIMELATE DECARBOXYLASE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 419 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 114/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L ++ A+K + + + G S E Sbjct: 27 GTPTYVYSRAALTAAYQAYAAACAGRKAQVQYAMKANSNLAVLQVFARLGAGFDIVSGGE 86 Query: 63 VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K A+ + ++ +L++ + A ++ K+ Sbjct: 87 LKRVLAAGGDPRKVVFSGVGKSAAEMELALAQDVRCFNVESIPELDRLNEVAGRVGKRAR 146 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 LRINP V ++ G +D + + V G+ H + Sbjct: 147 VSLRINPDVDARTHPYISTGLKGNKFGIAFEDVLPTYRAAAALPHLAVTGIDCHIGSQIT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + L ++ + +E I +GGG+ T D D E+ Sbjct: 207 EVEPYLEALDKVLDVVEALEREGISLEHIDVGGGLGITYTDETPPDITGFATTLLERVAA 266 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278 ++ EPG ++V N L T V + + D+++ + Sbjct: 267 RGHGHREVLFEPGRSLVGNAGVLLTQVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHRI 326 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + T + G C +GD G V+ GD ++ Y + +N Sbjct: 327 EPVALRDGAAVTYDIVGPVCESGDWLGRDRALA-VQPGDLLAVMSAGAYGFTMSSNYNTR 385 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 386 PRAAEVMVDGARVHLVRERELVEDLFR 412 >gi|206977595|ref|ZP_03238488.1| diaminopimelate decarboxylase [Bacillus cereus H3081.97] gi|222095152|ref|YP_002529212.1| diaminopimelate decarboxylase [Bacillus cereus Q1] gi|206744168|gb|EDZ55582.1| diaminopimelate decarboxylase [Bacillus cereus H3081.97] gi|221239210|gb|ACM11920.1| diaminopimelate decarboxylase [Bacillus cereus Q1] Length = 438 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLHQFLEELRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429 >gi|23099288|ref|NP_692754.1| diaminopimelate decarboxylase [Oceanobacillus iheyensis HTE831] gi|22777517|dbj|BAC13789.1| diaminopimelate decarboxylase (dap decarboxylase) [Oceanobacillus iheyensis HTE831] Length = 435 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 61/403 (15%), Positives = 123/403 (30%), Gaps = 38/403 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + NN + GVK + A K F++ M Q S Sbjct: 31 GTPLYVYDVALIRNNARAFVQAFTEKGVKGKVAYASKAFSSIAMLQVAKQEGLCLDVISE 90 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ +F E + K E + I+ + ++ + ++ K+ Sbjct: 91 GELYTALQAEFPTERIHMHGNNKSIEEIRMAVDYEIGCIVIDNFHDIDLLEKVLEEKQKQ 150 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + +R+ P V S+ G K + GL H Sbjct: 151 MDVLIRVTPGVESKTHQYIMTGNEDSKFGFDLQNGQAEQAFKRLHNHQQIRFQGLHCHIG 210 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK--------DF 214 + F + E + + ++ ++LGGG Sbjct: 211 SQIFETSGFQVATDLLFSELEKWNNKYDYQPNVLNLGGGFGIRYTKDDQPLPLDKYIKSM 270 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 ++ ++ S+++ ++EPG +IV N T+ + + ++ Sbjct: 271 ADAVQTHVKQLSMEMPEIWIEPGRSIVGNAGITLYTIGSNKQIPGIREYYSIDGGMTDNI 330 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N + G+ C +GD+ + GD ++ Sbjct: 331 RPALYNAAYEAVIANHPKNPIEKEVSIAGKCCESGDMLIWDLPVPEINSGDVLAVFSTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y+ + + +N + + +R +Y D N LS Sbjct: 391 YSYSMASHYNRLPNAAVVFVENGRDQLVVRRETYQDVVRNDLS 433 >gi|21223714|ref|NP_629493.1| diaminopimelate decarboxylase [Streptomyces coelicolor A3(2)] gi|13276798|emb|CAC33917.1| diaminopimelate decarboxylase [Streptomyces coelicolor A3(2)] Length = 463 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 63/398 (15%), Positives = 119/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL+D+ + + A K F + + L++ S E Sbjct: 63 GTPAYLLDEADFRERARAWRTAFGD-DADVFYAGKAFLSRAVVRWLDEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E A++ + AV + I+ ++ ++ + AQ L K+ Sbjct: 122 LATALSAGMPAERIAFHGNNKSPEEIERAVRAGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 +RI V + G + ++ + V G+ H + Sbjct: 182 VQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALKLDGLEVIGIHSHIGSQ 241 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F ++ ++ I LGGG+ + + + Sbjct: 242 IFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALTE 301 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG AIV T V + + V VD + ++ Sbjct: 302 IVTRECEAARLATPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E A+ + P V G+ C +GDI + F + GD I+ Y Sbjct: 362 ALYDAEYSVALASRTSDAEPMLVRVVGKHCESGDIVVKDAFLPGDLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVRDGAARVVVRRETEEDLLR 459 >gi|217031766|ref|ZP_03437270.1| hypothetical protein HPB128_155g79 [Helicobacter pylori B128] gi|298737096|ref|YP_003729626.1| carboxynorspermidine decarboxylase NspC [Helicobacter pylori B8] gi|216946613|gb|EEC25213.1| hypothetical protein HPB128_155g79 [Helicobacter pylori B128] gi|298356290|emb|CBI67162.1| carboxynorspermidine decarboxylase (NspC) [Helicobacter pylori B8] Length = 405 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++EK F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITKSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNVEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 FKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404 >gi|315453325|ref|YP_004073595.1| diaminopimelate decarboxylase [Helicobacter felis ATCC 49179] gi|315132377|emb|CBY83005.1| diaminopimelate decarboxylase [Helicobacter felis ATCC 49179] Length = 640 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 67/380 (17%), Positives = 132/380 (34%), Gaps = 21/380 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+YL D ++ A + ALK + + L + G S+YE Sbjct: 14 PTPFYLYDFDQIKEAFLEFKNAFSGAKSLICYALKANSNLSLLAHLARLGAGGDCVSIYE 73 Query: 63 VMLG-HEKFGGETHAYNV-AYKDCEIDAVLSNCDTI-IFNTVSQLNKFKDKAQKLHKKIG 119 V ++ + EI L + + +L + A L+ Sbjct: 74 VRRALLAGIPSYKIIFSGVGKLESEIQEALESKILFLNVESFEELQLIERIATDLNTPAR 133 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 + R+NP+++ ++ G + K+ ++ + GL H + Sbjct: 134 ISVRVNPNINAQTHPYISTGLWENKFGVEEKEAVQMFMFAKQSPFLEPVGLHCHIGSQLI 193 Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVK--DFCQRLKEFSEKY 225 + + + +++++ +GGG+ + + D+ + LK ++K Sbjct: 194 ELEPIKEAGEKMHALARFLMASGVELKFLDMGGGLGVDEGKGAISIADYTKPLKSIAQKL 253 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + + EPG IV ++ L + V + KN +IVD+ + + L + N Sbjct: 254 DLTLICEPGRRIVADSGVLVSRVQYVKPGARKNFIIVDAGMNDLMRPALYGARHSVEVLN 313 Query: 285 TGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T T + G C + D F + K V GD + F+ V Y + + +N Sbjct: 314 TQEGTEAIYDIVGPVCESADCFLKEVPLKGVTRGDLLLFKQVGAYGASMASHYNSRPKIL 373 Query: 342 IAVKNVDGTIKAIREFSYND 361 D S+ D Sbjct: 374 ELGVEQDRVRILRDRESFFD 393 >gi|229084515|ref|ZP_04216790.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-44] gi|228698805|gb|EEL51515.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-44] Length = 449 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 123/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ + + +G ++ A K F M + S Sbjct: 41 GTPLYVYDETAIREKCRAFHRAFQESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + ++ D A + Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFEMEILHDLAEQYGKN 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G +E NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGISTGQAMQAIQIALEKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPV--------KDF 214 + F ++ + Q ++ ++GGG + Sbjct: 221 SQIFETAGFVRAIEVLHHFLEEIREQTSYVATVLNVGGGFGIRYTEADTPLTLETYVHAV 280 Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + ++E K + I++EPG +IV + T TV + + V + ++ Sbjct: 281 TEVVREQFTKNNYPLPEIWIEPGRSIVGDAGTTIYTVGAVKDIPSIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N G + G+ C +GD+ V GD ++ Sbjct: 341 RPALYGARYEAMLANRGRENAKEVVSIAGKCCESGDMLIWDIELPQVISGDLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 440 >gi|327398433|ref|YP_004339302.1| diaminopimelate decarboxylase [Hippea maritima DSM 10411] gi|327181062|gb|AEA33243.1| diaminopimelate decarboxylase [Hippea maritima DSM 10411] Length = 412 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 64/387 (16%), Positives = 125/387 (32%), Gaps = 25/387 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ K + V + A+K + + T G S Sbjct: 23 VGSPVYVYSKGHFKAQFEKFNKAFSREHV-IAFAIKSNSNLAVIKTFASLGAGADIVSKG 81 Query: 62 EV-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ K + D I + +L A+KL+KK Sbjct: 82 ELFRAIKAGVDTSKIVFSGVAKRDDEIEYALENDIMMINVESEDELYNVNRVAEKLNKKA 141 Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE- 168 + R+NP V ++ G ++ E + +V G+ FH + Sbjct: 142 RIAFRVNPDVDPKTHPYISTGLKKNKFGVPYEEAYDLYLKAKELKNIDVYGIQFHIGSQL 201 Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 S + ++ + + + +GGG+ K+ V + ++++E Sbjct: 202 LDTTPIYDASVRVADLMRRLTDKGVEFRVVDVGGGVGIVYDEKTDKEPDVNLYARQIEEA 261 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES-- 278 + V++ LEPG +V N L + V+ + KN +I+D+ + + L Sbjct: 262 FRDFDVKLVLEPGRFLVGNGGILVSKVIYHKTNGQKNFLIIDAGMNDLLRPSLYKAYHKI 321 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + G C GD F + + V G+ I Y + +N Sbjct: 322 APMKKTGSKAIKCDIVGPICETGDFFARDYEIEDVPNGNFIVVFSAGAYGFTMASNYNSR 381 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 P + + D S D Sbjct: 382 PRPAEVLVSGDSYRVVRERESLEDLIK 408 >gi|227877371|ref|ZP_03995442.1| diaminopimelate decarboxylase [Lactobacillus crispatus JV-V01] gi|256848696|ref|ZP_05554130.1| diaminopimelate decarboxylase [Lactobacillus crispatus MV-1A-US] gi|262045896|ref|ZP_06018860.1| diaminopimelate decarboxylase [Lactobacillus crispatus MV-3A-US] gi|293381825|ref|ZP_06627797.1| diaminopimelate decarboxylase [Lactobacillus crispatus 214-1] gi|312978255|ref|ZP_07789998.1| diaminopimelate decarboxylase [Lactobacillus crispatus CTV-05] gi|227863039|gb|EEJ70487.1| diaminopimelate decarboxylase [Lactobacillus crispatus JV-V01] gi|256714235|gb|EEU29222.1| diaminopimelate decarboxylase [Lactobacillus crispatus MV-1A-US] gi|260573855|gb|EEX30411.1| diaminopimelate decarboxylase [Lactobacillus crispatus MV-3A-US] gi|290921611|gb|EFD98641.1| diaminopimelate decarboxylase [Lactobacillus crispatus 214-1] gi|310894774|gb|EFQ43845.1| diaminopimelate decarboxylase [Lactobacillus crispatus CTV-05] Length = 436 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 61/398 (15%), Positives = 121/398 (30%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ + + + + A K FAA M+ + + T S Sbjct: 31 GTPLVVYDVDQIRRQIRAFKKVFEEENMAYAVSYASKAFAAIAMYQVIAEEGAYTDVVSA 90 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E +++ K + ++ II + ++ Sbjct: 91 GELFTAIKANFPMERVSFHGNNKSLTELEMAVKNHVGKIIIDNFHEIQLLAQVLKKYDAT 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G + + + + G+ H Sbjct: 151 ISVMLRIAPGISAHTHEYDQTGQIDSKFGFDLESGQAEKALKQVLANPRMKMLGIHAHIG 210 Query: 167 CENKSFLCFSAMLKNIE----KEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + + F + + + + I++GGG Sbjct: 211 SQIFALNGFEMGAQKLMVVAQDWREKYGYLAQVINVGGGFGIKYTQEDHPLRPEEFVKTI 270 Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K +EK + I +EPG +IV TV + + + ++ Sbjct: 271 VKVIKTEAEKMNYPLPEIDIEPGRSIVGPAGYNLYTVGSRKDIPGYRSYITVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ + G+ C +GDI E VK GD ++ D Sbjct: 331 RPALYQAKYETVLATDPQAPLTEHVRIAGKYCESGDILAEDQALPQVKAGDLLAMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I+ S D Sbjct: 391 YGYSMASNYNRNPRPAVVFAENGKAKLVIKRESLEDLV 428 >gi|261837475|gb|ACX97241.1| carboxynorspermidine decarboxylase [Helicobacter pylori 51] Length = 405 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F+ L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFEVLRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGIVPSGFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++EK F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 LKISVENDEELIEVEKGENQGVFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404 >gi|229010823|ref|ZP_04168020.1| Diaminopimelate decarboxylase [Bacillus mycoides DSM 2048] gi|228750497|gb|EEM00326.1| Diaminopimelate decarboxylase [Bacillus mycoides DSM 2048] Length = 449 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ ++ I A+ +N + + +L D A + Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEMIMALQANIGCFVVDNFLELEILHDLAMQHGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVK---------- 212 + F ++ + + + ++ +++GGG D Sbjct: 221 SQIFETAGFVRAIEVLRQFLEEVRERTHYVMKVLNVGGGFGIRYTDSDTPLTLETYVHAV 280 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + E V + ++ Sbjct: 281 TSTIREQFTLCEYPLPEIWIEPGRSIVGDAGTTLYTVGAVKEIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 341 RPALYGARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDINLPQVASSDLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440 >gi|256420790|ref|YP_003121443.1| diaminopimelate decarboxylase [Chitinophaga pinensis DSM 2588] gi|256035698|gb|ACU59242.1| diaminopimelate decarboxylase [Chitinophaga pinensis DSM 2588] Length = 435 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 60/405 (14%), Positives = 129/405 (31%), Gaps = 40/405 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+YL L + + + ++K + + L G S Sbjct: 26 LPTPFYLYSANTLRLHYKKIYGAFEKLDPVICFSVKSSNNVHLLNELAALGAGMDIVSGG 85 Query: 62 EVMLGHEKFG--GETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + + + V D E DA+LS I + +L + ++ A L +++ Sbjct: 86 ELFVVKQSNADLSKVVFAGVGKSDEEITDAILSEVGYINIESEQELARVQELAGDLKREV 145 Query: 119 GLRINPSVS---YSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168 + I ++ G ++ + + GL H Sbjct: 146 SVLIRIQPDITDEKTNEKTRTGYKGAKFGIDYANVEALIEENADHPFVKIKGLHCHIGSP 205 Query: 169 NKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------CQRL 218 S+ + ++ + + ++ +++GGG D + + L Sbjct: 206 ISSYTFYEECIRKMVGLTESLKQKNIILKVLNIGGGFPANYMDNDNFSWESFAGPIIELL 265 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 + + +K +I LEPG +I NT L T VL + ++ + + D+ + + + Sbjct: 266 EPYVKKEGFKIILEPGRSISANTAVLVTRVLYVKKSGDKNIAILDAGMTELIRPAMYNAF 325 Query: 278 SATI----------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 G V G C + D + P++ GD ++ Sbjct: 326 HFIWPVKPEAQHLLTNRNYPVEQEGLTNYDVVGPICESSDYLAKERALPPLQQGDYVAVF 385 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 V Y + + +N P + + D + D + Sbjct: 386 TVGAYGMVMASNYNLHVRPAEVMIDKDKIYIIRERETQQDLVRKM 430 >gi|91214570|ref|ZP_01251543.1| diaminopimelate decarboxylase [Psychroflexus torquis ATCC 700755] gi|91186997|gb|EAS73367.1| diaminopimelate decarboxylase [Psychroflexus torquis ATCC 700755] Length = 401 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 61/386 (15%), Positives = 119/386 (30%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV-KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D + ++N K +L A+K + + NQ G + S+ Sbjct: 14 GSPVYVYDSETIINQYKRLTEAFKKVKHLRLHYAVKALSNLSILRLFNQLGSGLDTVSIQ 73 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG + + I + + L +F K + Sbjct: 74 EVKLGIAAGVNPKKIIFTPNGVSIGELEEAVGLGVQINIDNLLILEQFGTK--HPKVPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFL 173 +RINP V S+ G +E+ +NG+ H + Sbjct: 132 IRINPHVMAGGNTNISVGHIDSKFGISIHQMPHVLRIVENTGMTINGIHMHTGSDILDIG 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230 F + + F +E++ G G + ++ + L K + Sbjct: 192 VFLYAAEILFDVAAKF-QNLEFLDFGSGFKVPYHEGDIETDVEELGTKLTKRFNEFCKSY 250 Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 EPG+ +V+ V + + + S H+ + Y + I Sbjct: 251 GKDLTLAFEPGKFLVSEAGFFLAKVNVVKQTTSTVFAQIDSGFNHLVRPMFYGSNHDIIN 310 Query: 284 NTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + P V G C D F + GD ++F++ Y + + +N Sbjct: 311 ISHPKRNKRFYSVVGYICET-DTFANNKMITEISEGDILAFKNAGAYCYSMASNYNSRFR 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + + +++D N Sbjct: 370 PPEVLWHKGKAHLIRQRETFDDIVRN 395 >gi|15644653|ref|NP_206822.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori 26695] gi|2313093|gb|AAD07088.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori 26695] Length = 405 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSGFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++EK F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITKSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 FKVSVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404 >gi|319951908|ref|YP_004163175.1| diaminopimelate decarboxylase [Cellulophaga algicola DSM 14237] gi|319420568|gb|ADV47677.1| diaminopimelate decarboxylase [Cellulophaga algicola DSM 14237] Length = 412 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 66/384 (17%), Positives = 118/384 (30%), Gaps = 27/384 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 P Y+ D +K++ + +KL A K + + +N G + S+ EV Sbjct: 16 PVYVYDSEKIIAQFNRLTNAFSGVKKLKLNYAAKALSNITILKLMNSLGSGLDTVSIQEV 75 Query: 64 MLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 LG F E + EI+ I + +S L +F K + +R Sbjct: 76 QLGLLAGFKPENIIFTPNGVSLEEIEEAAKLGVRINIDNLSILEQFGSK--FPKVPVCIR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCENKSFLCF 175 INP V S+ G ++NG+ H + F Sbjct: 134 INPHVMAGGNSNISVGHIDSKFGISIHQIPHLLRIVELTQMHINGIHMHTGSDILDIDVF 193 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230 + I E ++++I G G K+ ++ + L + Sbjct: 194 LYASE-ILFETAKNFKELDFIDFGSGFKVPYKEGDIETNIEELGSKLTEKFNAFCKEYGK 252 Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLL--YQESATIY 282 EPG+ +V+ V + + +DS + L Y + I Sbjct: 253 ELTLAFEPGKFLVSEAGQFLAKVNVVKQTTSTVFASIDSGFNHLIRPMLYGSYHQIENIS 312 Query: 283 PNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 G V G C D F + GD ++F++ Y + +N P Sbjct: 313 NPEGRERYYSVVGYICET-DTFASNRRITEISEGDILTFKNAGAYCFTMASNYNSRFRPA 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365 + + + + D N Sbjct: 372 EVLWHKGEAVLIRERETLEDIIKN 395 >gi|226509744|ref|NP_001141045.1| hypothetical protein LOC100273126 [Zea mays] gi|194702382|gb|ACF85275.1| unknown [Zea mays] Length = 488 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 114/386 (29%), Gaps = 27/386 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P+YL K ++L N + + A+K + L + G S E+ Sbjct: 94 SPFYLYSKPQILRNFAAYRDALQGLRSIIGYAVKANNNLPVLRVLRELGCGAVLVSGNEL 153 Query: 64 MLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119 L F +N + + + ++ L +A + Sbjct: 154 RLALQAGFDPARCIFNGNGKTLEHLKLAAESGVFVNVDSEFDLENIVRAARATGKKVPVL 213 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS 171 LRINP V S+ G + + + G+ H Sbjct: 214 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYPNEIKLVGVHCHLGSTITK 273 Query: 172 FLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSE 223 F + ++E++++GGG+ D ++E Sbjct: 274 VDIFRDAAVLMLNYVDEIRAQGFKLEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVL 333 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESA--- 279 + + +EPG +++ NT V + N IV A + L Sbjct: 334 SQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIEL 393 Query: 280 --TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 P T + G C + D G+ G + D Y ++ + +N Sbjct: 394 VSPPTPGAEAATFDIVGPVCESADFLGKDRELPTPDEGAGLVVHDAGAYCMSMASTYNLK 453 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDY 362 P DG+I IR +DY Sbjct: 454 LRPPEYWVEADGSIVKIRHGEKLDDY 479 >gi|78044590|ref|YP_360770.1| diaminopimelate decarboxylase [Carboxydothermus hydrogenoformans Z-2901] gi|77996705|gb|ABB15604.1| diaminopimelate decarboxylase [Carboxydothermus hydrogenoformans Z-2901] Length = 517 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 61/399 (15%), Positives = 125/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+++ N K+ G + A K + + + G S Sbjct: 102 GTPLYILDEEEFRKNCREYYQNFTQKHPGSLAIYAGKTLLTTAICRLVEEEGLGLDVVSG 161 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E V + + + + +L D A K+ Sbjct: 162 GELYTAIKADFPLHKVYFHGNNKSPEEIRLGVEAGVGRFVVDNLYELYLLNDIAKSYKVR 221 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + I LR++P + + S+ G + +E + + G H Sbjct: 222 QPILLRVSPGIEAHTHEYIKTGQIDSKFGFPIETGQAMDAAQRALELDGIELKGFHCHIG 281 Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F+ M + + F E + LGGG+ + + Sbjct: 282 SQIFELESFAHTVEVMTAFMAEVFKATGFMTEELDLGGGLGIYYAEGDNPPTVAAMAETI 341 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + ++ +EPG +I + T+ I + V + + Sbjct: 342 FTTLESQCQKLGLKVPKVIVEPGRSIAGPAGSTLYTIGAIKDIPGIRTYVAVDGGMGDNP 401 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N + G+ C +GD+ +K GD + + Sbjct: 402 RPALYQAKYEAIVANKANDQPVKLVSIAGKCCESGDMLIWDIELAEIKPGDLLLVSNTGA 461 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + +N + P + + +R +Y+D + Sbjct: 462 YNYSMAMNYNRLPRPAMVLVGGGKAELIVRRETYDDLLS 500 >gi|302537812|ref|ZP_07290154.1| diaminopimelate decarboxylase [Streptomyces sp. C] gi|302446707|gb|EFL18523.1| diaminopimelate decarboxylase [Streptomyces sp. C] Length = 445 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 69/397 (17%), Positives = 124/397 (31%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ ++ T A + A K F + M +++ G S E Sbjct: 47 GTPVYVLDEGEVRGRCRTYKEAFPAAD--VYYAAKAFLSRAMVRWVHEEGLGLDVCSAGE 104 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKI 118 + L F E + K A+ I+ ++ S++ + +K+ Sbjct: 105 LELAVTAGFPPERIVLHGNAKSPRDLGSALRLGVGRIVIDSPSEIARIAAAVGPGDRQKV 164 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169 +R+ P VS + G D + + GL H + Sbjct: 165 MVRVVPGVSAGGHDKIRTGTDGQKFGLSAADGSAARAVARVLAQPQLELTGLHCHIGSQI 224 Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224 + M+ + T + + LGGG + L Sbjct: 225 TEAEPYLTALRRMVALMAGVRDAHGTVLPELDLGGGHGIAYRPGEPALDVAVLARGLRDG 284 Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYL 273 ++ +EPG A+V VL + V VD + + L Sbjct: 285 LAEGCAAAGFPVPRLAVEPGRAVVGPAGVAVYRVLAVKHTGDTLFVAVDGGMSDNPRPAL 344 Query: 274 LYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 A P GP TA V GR C AGD+ V+ GD ++ Y++ Sbjct: 345 YGVRYAPRLIGRAPTAGPRTATVVGRHCEAGDVLAAGVELPGDVRPGDLVAVPVAGAYHL 404 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + +R ++ D Sbjct: 405 SMASGYNMVGRPPVVAVHEGTARLLVRRETFEDLRRR 441 >gi|317013444|gb|ADU80880.1| carboxynorspermidine decarboxylase [Helicobacter pylori Gambia94/24] Length = 405 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 136/400 (34%), Positives = 207/400 (51%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y ++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ +L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESHKEICVYSPAFKEAEMSTILPLATSIIFNSFHQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKTSRLGITPSGFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 LKVSVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKIDSQG-FKILKSFSYEDYKNR 404 >gi|326777094|ref|ZP_08236359.1| diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1] gi|326657427|gb|EGE42273.1| diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1] Length = 444 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 66/397 (16%), Positives = 121/397 (30%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ ++ + T ++L A K F + M +++ G S+ E Sbjct: 46 GTPVYVLDEDEVRSRCRTYRAAF--PDARVLYAAKAFLSRAMARWIDEEGLGLDVCSVGE 103 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118 + L H F E + K I+ ++ S++ + +K+ Sbjct: 104 LELAHAAGFPPERMVLHGNAKTPHDIETALRLGVGRIVVDSPSEIARIAALTGPGGRQKV 163 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169 +R+ P VS + G + + GL H + Sbjct: 164 MVRVVPGVSAGGHEKIRTGTDGQKFGLSLTDGSAQHAIARVLGQPQLELTGLHCHIGSQI 223 Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + ++ + + + + LGGG + L Sbjct: 224 TDAKPYAVAVRRLVGLMARIKDNHGVTFPELDLGGGHGVAHRPGDPALDLTALARRLGAE 283 Query: 226 -----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYL 273 + +EPG AIV VL + N V VD + + L Sbjct: 284 LATSCAAAGLPVPRTVIEPGRAIVAPAGVALYRVLAVKHTGPNLFVAVDGGMSDNPRPAL 343 Query: 274 LYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 A GP A V GR C AGD+ ++ GD ++ Y + Sbjct: 344 YGARYAPRLIGRSTTAGPVAATVVGRHCEAGDVLANDVLLPGDIRSGDLLAVPVAGAYQV 403 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + IR + D Sbjct: 404 SMASSYNLVGRPPVVAVHDGTARLLIRRETQEDLRRR 440 >gi|182436473|ref|YP_001824192.1| putative diaminopimelate decarboxylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464989|dbj|BAG19509.1| putative diaminopimelate decarboxylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 458 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 66/397 (16%), Positives = 121/397 (30%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ ++ + T ++L A K F + M +++ G S+ E Sbjct: 60 GTPVYVLDEDEVRSRCRTYRAAF--PDARVLYAAKAFLSRAMARWIDEEGLGLDVCSVGE 117 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118 + L H F E + K I+ ++ S++ + +K+ Sbjct: 118 LELAHAAGFPPERMVLHGNAKTPHDIETALRLGVGRIVVDSPSEIARIAALTGPGGRQKV 177 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169 +R+ P VS + G + + GL H + Sbjct: 178 MVRVVPGVSAGGHEKIRTGTDGQKFGLSLTDGSAQHAIARVLGQPQLELTGLHCHIGSQI 237 Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + ++ + + + + LGGG + L Sbjct: 238 TDAKPYAVAVRRLVGLMARIKDNHGVTFPELDLGGGHGVAHRPGDPALDLTALARRLGAE 297 Query: 226 -----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYL 273 + +EPG AIV VL + N V VD + + L Sbjct: 298 LATSCAAAGLPVPRTVIEPGRAIVAPAGVALYRVLAVKHTGPNLFVAVDGGMSDNPRPAL 357 Query: 274 LYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 A GP A V GR C AGD+ ++ GD ++ Y + Sbjct: 358 YGARYAPRLIGRSTTAGPVAATVVGRHCEAGDVLANDVLLPGDIRSGDLLAVPVAGAYQV 417 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + IR + D Sbjct: 418 SMASSYNLVGRPPVVAVHDGTARLLIRRETQEDLRRR 454 >gi|150392021|ref|YP_001322070.1| diaminopimelate decarboxylase [Alkaliphilus metalliredigens QYMF] gi|149951883|gb|ABR50411.1| diaminopimelate decarboxylase [Alkaliphilus metalliredigens QYMF] Length = 433 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 120/399 (30%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ K+K+ K K A K F M + G S Sbjct: 26 GTPLYVLSKEKIQERCKEIRETFLQKYENTKAAYASKAFLTMAMCRIIESEGLGLDVVSG 85 Query: 61 YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E ++ + AV II + + +L + A Q Sbjct: 86 GEIYTAVQAGFPMEKTMFHGNNKSFEELYLAVEHGVGRIIVDNLLELEMLQQIAKEQGKK 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + R+ P V + S+ G K +ES + G FH Sbjct: 146 VDVLFRVTPGVEGKTHAYIVTGQKDSKFGIPLQPEIIESAVKQTMESPYIKLKGFHFHIG 205 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKD-------FC 215 + ++ + + H +E+I + GGG D + Sbjct: 206 SQLFENDSYTDATQVLVNLMKHLKDHLEFITEELNTGGGFGIKYVDEAPRPLGYFTDAIM 265 Query: 216 QRLKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV--EAHVP 270 + +K+ EK I +EPG IV + + E + Sbjct: 266 ETIKDACEKVGLEVPTIIIEPGRWIVGEAGITLYRIGTVKEIPDVRTYASVDGGLPDNPR 325 Query: 271 DYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + A + G+ C +GDI ++ GD ++ Y Sbjct: 326 PALYNAKYDAVVANKIDEEKDQIVTIAGKCCESGDILIWDLQAPQIQTGDLLAVLSTGAY 385 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N + + +N + P + + + ++ +Y D + Sbjct: 386 NFSMASNYNRLPRPAVVLVDQGKAEIMVQRETYGDLLSR 424 >gi|154148229|ref|YP_001405731.1| carboxynorspermidine decarboxylase [Campylobacter hominis ATCC BAA-381] gi|153804238|gb|ABS51245.1| carboxynorspermidine decarboxylase [Campylobacter hominis ATCC BAA-381] Length = 408 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 137/403 (33%), Positives = 208/403 (51%), Gaps = 40/403 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IKTP Y+ +K LL NL+ + + +G K+L ALK FA + +++ G T S L+ Sbjct: 6 IKTPAYVCEKDALLRNLELLKSVGEESGAKVLCALKGFAFSLAMPYIGEFLRGATCSGLF 65 Query: 62 EVMLGHEKFGG-----------------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL 104 E ++ G E H Y+ A+KD ++D +L + ++FN+ SQ Sbjct: 66 EAKYANDLIKGGLSENMQKMGNKNYKNIEIHTYSPAFKDDDMDEILQISNHVVFNSFSQW 125 Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNV 158 KF+ KA K GLR+NP S+S +P FSRLG ++ + + Sbjct: 126 KKFRQKAIISGVKCGLRVNPQTSFSPVENYNPCGKFSRLGITIENFKNALNVENSLLDGI 185 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218 +GL H CE +S +++ E +FG FI +++WI+ GGG H T K Y V+ + L Sbjct: 186 SGLHLHALCE-ESSEHLQTVVREFEMQFGEFIPRMKWINFGGGHHITKKGYNVELLVKIL 244 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 K+FS+K+ V++Y+EPGEA+ L +VLDI EN + I+D+S EAH+PD +L Sbjct: 245 KDFSQKWGVEVYIEPGEAVGWQCGYLVASVLDIVENGVKIAILDTSAEAHMPDTVLMPYR 304 Query: 279 ATIYP----------NTGPYTAMVCGRSCLAGDIFGE------FHFEKPVKIGDRISFED 322 + N ++ G +CLAGDI G + FEKP+KIGDRI FED Sbjct: 305 PAVRDEISSCDKKLKNGEIFSYRFGGNTCLAGDIIGLESGEPLYCFEKPLKIGDRIIFED 364 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + FNGI +P + + + +G I + F Y++Y Sbjct: 365 QIHYTIVKNTTFNGIKLPDLYLIDKNGEILDSKIFGYDEYKRR 407 >gi|229166360|ref|ZP_04294117.1| Diaminopimelate decarboxylase [Bacillus cereus AH621] gi|228617102|gb|EEK74170.1| Diaminopimelate decarboxylase [Bacillus cereus AH621] Length = 438 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ ++ I A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEMIMALQANIGCFVVDNFLELEILHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVK---------- 212 + F ++ + + + ++ +++GGG D Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVRERTHYVMKVLNVGGGFGIRYTDSDTPLTLETYVHAV 269 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + E V + ++ Sbjct: 270 TSTIREQFTLCEYPLPEIWIEPGRSIVGDAGTTLYTVGAVKEIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYGARYEAMLANRGNDKNEELVSIAGKCCESGDMLIWDINLPQVASSDLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 429 >gi|328885052|emb|CCA58291.1| Diaminopimelate decarboxylase [Streptomyces venezuelae ATCC 10712] Length = 463 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 118/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D+ + A K F + + L + S E Sbjct: 63 GTPAYFLDETDFRARCRAWAEAFGK-DADVFYAGKAFLSRAVVRWLKEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E A++ K AV + I+ ++ ++ + AQ L K+ Sbjct: 122 LATALSAGMPAERIAFHGNNKSEAEIRRAVEAGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 +R+ V + G + ++ + + G+ H + Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRRALKLDGLELIGIHSHIGSQ 241 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +++ + + ++ I LGGG+ + + + Sbjct: 242 IFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALGE 301 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG AIV T V + + V VD + ++ Sbjct: 302 IVTRECESAGLATPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + + P + V G+ C +GDI F + GD I+ Y Sbjct: 362 ALYDAEYSVSLVSRTSDAAPMLSRVVGKHCESGDIVVRDAFLPSDLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D Sbjct: 422 CRSMASNYNHAQRPPVVAVRDGEARVIVRRETEEDLLR 459 >gi|195624020|gb|ACG33840.1| diaminopimelate decarboxylase [Zea mays] gi|224030925|gb|ACN34538.1| unknown [Zea mays] Length = 486 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 117/386 (30%), Gaps = 27/386 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P+YL K ++L N + + A+K + L + G S E+ Sbjct: 92 SPFYLYSKLQILRNFAAYRDALQGLRSIVGYAVKANNNLPVLRVLRELGCGAVLVSGNEL 151 Query: 64 MLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119 L F +N ++ + + ++ L +A + Sbjct: 152 RLALQAGFDPARCIFNGNGKTLEDLKLAAESGVFVNVDSEFDLENIVRAARATGKKVPVL 211 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171 LRINP V S+ G + + S + G+ H Sbjct: 212 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLNSIKSYSNEIKLVGVHCHLGSTITK 271 Query: 172 FLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSE 223 F + ++E++++GGG+ D ++E Sbjct: 272 VDIFRDAAVLMVNYVDEIRAQGFKLEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVL 331 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIY 282 + + +EPG +++ NT V + N IV A + L Sbjct: 332 SQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIEL 391 Query: 283 PNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + T + G C + D G+ G + D Y ++ + +N Sbjct: 392 VSPPTPGAEVATFDIVGPVCESADFLGKDRELPTPDEGAGLVVHDAGAYCMSMASTYNLK 451 Query: 338 NMPTIAVKNVDGTIKAIR-EFSYNDY 362 P DG+I IR E +DY Sbjct: 452 LRPPEYWVEEDGSIVKIRHEEKLDDY 477 >gi|49477226|ref|YP_035636.1| diaminopimelate decarboxylase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328782|gb|AAT59428.1| diaminopimelate decarboxylase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 438 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLHQFLEELRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429 >gi|83590211|ref|YP_430220.1| diaminopimelate decarboxylase [Moorella thermoacetica ATCC 39073] gi|83573125|gb|ABC19677.1| diaminopimelate decarboxylase [Moorella thermoacetica ATCC 39073] Length = 434 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 61/400 (15%), Positives = 114/400 (28%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ + +N + +++ A K F M + G S Sbjct: 24 GTPLYIFDEDCIRDNCRQFYRAFNAGSGQAEVIYAGKAFLTTAMCRIIASEGLGLDVVSG 83 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F E ++ K + + + + ++L A + + Sbjct: 84 GELYTALAAGFPVERIYFHGNNKSYAELCQGLEAGIGRFMVDNFTELELLSRLAVERGQV 143 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 K+ LR+ P + + S+ G + E GL H Sbjct: 144 AKVILRVTPGIEAHTHDYIRTGQVDSKFGFTLPGGQALAAARRAGELPGIEFMGLHCHIG 203 Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK--- 219 + ++ M++ + LGGG + Sbjct: 204 SQIFELEPYNEAVAVMMELAAAVKEATGLVTAELDLGGGFGIYYTTGDEPRPIRAYAETI 263 Query: 220 --------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 ++ +EPG +IV + TV I E V + ++ Sbjct: 264 LARVREEARRLNLPQPRVLVEPGRSIVGPAGSTAYTVGSIKEIPGVRKYVAVDGGMADNI 323 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N V G+ C +GD+ PV+ GD + Sbjct: 324 RPALYGAKYEAILANKAGMPATEKVTVTGKCCESGDMLIWEAELPPVERGDILLMPCTGA 383 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +N + P + I+ Y+D N Sbjct: 384 YGYTMASNYNRLGRPAAVLVRDGVADLIIKREDYSDLIRN 423 >gi|229138209|ref|ZP_04266805.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST26] gi|228645241|gb|EEL01477.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST26] Length = 449 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 221 SQIFETAGFVRAIEVLRQFLEAVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 281 TSAVREQFTLCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 341 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440 >gi|195619652|gb|ACG31656.1| diaminopimelate decarboxylase [Zea mays] Length = 488 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 27/386 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P+YL K ++L N + + A+K + L + G S E+ Sbjct: 94 SPFYLYSKPQILRNFAAYRDALQGLRSIIGYAVKANNNLPVLRVLRELGCGAVLVSGNEL 153 Query: 64 MLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119 L F +N ++ + + ++ L +A + Sbjct: 154 RLALQAGFDPARCIFNGNGKTLEDLKLAAESGVFVNVDSEFDLENIVRAARATGKKVPVL 213 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS 171 LRINP V S+ G + + + G+ H Sbjct: 214 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYPNEIKLVGVHCHLGSTITK 273 Query: 172 FLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSE 223 F + ++E++++GGG+ D ++E Sbjct: 274 VDIFRDAAVLMVNYVDEIRAQGFKLEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVL 333 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIY 282 + + +EPG +++ NT V + N IV A + L Sbjct: 334 SQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIEL 393 Query: 283 PNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + T + G C + D G+ G + D Y ++ + +N Sbjct: 394 VSPPTPGAEVATFDIVGPVCESADFLGKDRELPTPDEGAGLVVHDAGAYCMSMASTYNLK 453 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDY 362 P DG+I IR +DY Sbjct: 454 LRPPEYWVEADGSIVKIRHGEKLDDY 479 >gi|229195717|ref|ZP_04322479.1| Diaminopimelate decarboxylase [Bacillus cereus m1293] gi|228587723|gb|EEK45779.1| Diaminopimelate decarboxylase [Bacillus cereus m1293] Length = 449 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 221 SQIFETAGFVRAIEVLRQFLEAVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 281 TSAVREQFTLCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 341 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440 >gi|317122541|ref|YP_004102544.1| diaminopimelate decarboxylase [Thermaerobacter marianensis DSM 12885] gi|315592521|gb|ADU51817.1| diaminopimelate decarboxylase [Thermaerobacter marianensis DSM 12885] Length = 445 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 118/397 (29%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + +AGV + A K + ++Q + S E Sbjct: 38 GTPLYVLDEVAIRQRCRAYRDAMGDAGV-IAYAAKALCTTAILRIMDQEGLWMDAVSGGE 96 Query: 63 VMLGHE-KFG-GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKF--KDKAQKLHKK 117 + F G + D E+ A+ + ++ + +L + +A Sbjct: 97 LHTALAAGFPAGRVLLHGNNKSDEELRLAIETGVGRVVIDNFYELERLAAMARAAGRKVP 156 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEIKNVN-------GLMFHNNCE 168 + LR+ P V + S+ G + + + ++ G H + Sbjct: 157 VLLRVAPGVEAHTHEFIRTGQQESKFGFDLATGQALAALERVLDEPALDWYGFHCHIGSQ 216 Query: 169 NKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 + + M+ + + + LGGG+ Sbjct: 217 ILAVEPWEQAARIMMDLAAEAHRRTGRVMRELDLGGGLGIRYLPQDEPPSIAETVGRIRA 276 Query: 225 YS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 ++ LEPG +IV TV + V VD + + Sbjct: 277 AVAAAAEERGLPVPRLILEPGRSIVGEAGVTLYTVGAVKRVPGLAPYVAVDGGMADNPRY 336 Query: 272 YLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + N + GR C +GDI V+ GD ++ YN Sbjct: 337 ALYRALYTAVLANRPLDEPAERVCLVGRYCESGDILIPQIDLPRVEPGDVVAVFSTGAYN 396 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + + + +Y+D Sbjct: 397 YSMSSQYNRFPRPAMVLVRDGEAEVIVERETYDDLLR 433 >gi|321471945|gb|EFX82917.1| hypothetical protein DAPPUDRAFT_316211 [Daphnia pulex] Length = 489 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 131/400 (32%), Gaps = 37/400 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y+ + +L N+ + ++AG+ + A+K + + + + G + S Sbjct: 87 TPLYIYSQAQLHRNIQSYKDAIQSAGMSGRMHIFYAVKANPNLHLMELVRKQNCGAVTVS 146 Query: 60 LYEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 YE+ F E N + EI L N + ++ A++L K Sbjct: 147 GYELKAALNTGFVPEMILLNGNGKQMWEIRLALKNGCMLNVDSYFDAENIISVARQLQKT 206 Query: 118 IGLRINPSV-----SYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHN 165 + I + S S+ G + V GL H Sbjct: 207 ARVLIRVNPGLEQSSTPVHSYLSTALKNSKFGIPLHQFDQVLELLRAEHFIQVVGLHCHV 266 Query: 166 NCENKSF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFC 215 + +L +K ++++ +GGG+ + P+ Sbjct: 267 GSTIRDAFIYSDVTRILLDIRQKLITQGYAHLKYLDIGGGLGIDYYHGTNQEQSPLSSTG 326 Query: 216 QRLKEF--SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK---NLVIVDSSVEAHVP 270 + ++ V++ +EPG ++V NT L T VL ++ N V+VD+++ + Sbjct: 327 ELIQAIASLLPPDVEVIIEPGRSLVANTGILVTKVLGSKKSPDGGKNFVVVDAAMNDLIR 386 Query: 271 DYLLYQESATIYPNTG---PYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGY 326 + T + G C +GD + GD ++ D+ Y Sbjct: 387 PSFYQAYHHVLPVRKSISSEGTYDIVGPICESGDFLAVDRRLAQEPVKGDLMAIMDIGAY 446 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + + +N + + + R ++ + Sbjct: 447 GMAMASNYNMRARAAEVLVDGNSWKIIRRRENFESLVRTM 486 >gi|254778756|ref|YP_003056861.1| Carboxynorspermidine decarboxylase [Helicobacter pylori B38] gi|254000667|emb|CAX28576.1| Carboxynorspermidine decarboxylase [Helicobacter pylori B38] Length = 405 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 136/400 (34%), Positives = 208/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFERGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITKSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S H+PD L +I Sbjct: 246 ERYHDIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSTHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 FKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404 >gi|229183714|ref|ZP_04310934.1| Diaminopimelate decarboxylase [Bacillus cereus BGSC 6E1] gi|228599757|gb|EEK57357.1| Diaminopimelate decarboxylase [Bacillus cereus BGSC 6E1] Length = 449 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ N+ G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNMLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 221 SQIFETAGFVRAIEVLHQFLEGVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 281 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ V D ++ Sbjct: 341 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440 >gi|15611089|ref|NP_222740.1| putative carboxynorspermidine decarboxylase [Helicobacter pylori J99] gi|4154520|gb|AAD05600.1| putative carboxynorspermidine decarboxylase [Helicobacter pylori J99] Length = 405 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 137/400 (34%), Positives = 208/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y ++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNTEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 LKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKIDSQG-FKILKSFSYEDYKNR 404 >gi|124268300|ref|YP_001022304.1| diaminopimelate decarboxylase [Methylibium petroleiphilum PM1] gi|124261075|gb|ABM96069.1| diaminopimelate decarboxylase [Methylibium petroleiphilum PM1] Length = 424 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 115/387 (29%), Gaps = 26/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ +L L + A+K ++ + T Q G S E Sbjct: 31 GTPLYVYSRRAMLAALAPYQRALAGREHLICYAMKASSSLAVLQTFAQAGCGFDIVSGGE 90 Query: 63 VMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ + ++L+ + A L + Sbjct: 91 LDRVLAAGGDPGKVVFSGLGKTRAEMRRALEIGVRCFNVESEAELDVLSEVALSLGRVAP 150 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + LR+NP V ++ G + + + V G+ H + Sbjct: 151 VSLRVNPDVDAKTHPYISTGLKGNKFGIAHDRAVAAYRRAAQLPGLKVVGIDCHIGSQIT 210 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS- 226 + ++ + +I + LGGG+ D + + Sbjct: 211 EIAPYLDAADRVLDLVEAIESSGLRIHHLDLGGGLGIQYTDERPPAADALIGALLARLDA 270 Query: 227 -----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLL---YQE 277 + EPG ++V N L + VL + VD+++ + L Sbjct: 271 RGHGARTLVFEPGRSLVGNAGVLLSEVLYLKPGTHKNFCVVDAAMNDLMRPALYEATMSI 330 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + P V G C +GD G ++ GD ++ Y ++ + +N Sbjct: 331 VPCRLRDGVPVVYDVVGPVCESGDWLGRDRALA-LQPGDAVAVLSAGAYGMSMASNYNSR 389 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + + Sbjct: 390 PRAAEVMVDGDVATLIREREPVAELFR 416 >gi|238060800|ref|ZP_04605509.1| diaminopimelate decarboxylase [Micromonospora sp. ATCC 39149] gi|237882611|gb|EEP71439.1| diaminopimelate decarboxylase [Micromonospora sp. ATCC 39149] Length = 462 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 122/398 (30%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ L + + A K F + + + + E Sbjct: 63 GTPVYVLDEDDLRSRCRDFRAAF--PDADVYYAGKAFLCRAVVRMIAEEGMFLDVCTGGE 120 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E ++ K A+ + I+ ++ +++++ A++ + G Sbjct: 121 LATALSAGMPAERIGFHGNNKSVAELTRALDAGVGRIVLDSFTEIDRLTALARERGVRPG 180 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 +R+ V + G I+ + ++ GL H + Sbjct: 181 VLIRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAAAAAFKVIDEGVLDLLGLHSHIGSQ 240 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKE 220 F ++ + ++ + LGGG +D +RL++ Sbjct: 241 IFDASGFEVSARRVIALQAQIRDARGVELPELDLGGGFGIAYTTQDDPAAPQDLAKRLRK 300 Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + ++ +EPG AIV V + V + ++ Sbjct: 301 IVDGECAAERLAVPRLSIEPGRAIVGPAVFTLYEVGTVKNVDGIRTYVSVDGGMSDNIRT 360 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L A+ P A V G+ C +GDI + F V+ GD ++ Y Sbjct: 361 ALYDASYSATLASRASAAEPLLARVVGKHCESGDIVVKDEFLPADVQAGDLVAVPGTGAY 420 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + +R + D Sbjct: 421 CRSMASNYNHVPRPAVVAVCDGQARLIVRRETEEDLLA 458 >gi|315057735|gb|ADT72064.1| Diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni S3] Length = 402 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 58/379 (15%), Positives = 125/379 (32%), Gaps = 22/379 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ + + K ++ A+K + + L G S+ EV Sbjct: 12 TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71 Query: 64 MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ K + A+ + I + +++ + A++L+ K + Sbjct: 72 KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131 Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168 R+NP+V ++ G + S G+ FH + Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 +A++ + +E +++ +GGG+ + + ++ Q + Sbjct: 192 ISPIHEAAAIVAKLARELKALQIDLKFFDIGGGLGVAYEKDECEPDLYNYAQGILAQLHG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I +EPG +V + +VL K V+VD ++ + L I P Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311 Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T V G C +GD F + + GD + ++ Y + + +N N Sbjct: 312 YTQAQESLCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVC 371 Query: 342 IAVKNVDGTIKAIREFSYN 360 + ++ Sbjct: 372 ELALEEGQVRLIRQRENFE 390 >gi|283955208|ref|ZP_06372709.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 414] gi|283793245|gb|EFC32013.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 414] Length = 402 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 56/383 (14%), Positives = 122/383 (31%), Gaps = 22/383 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ + + K ++ A+K + + L G S+ EV Sbjct: 12 TPFYIYNFDSIKERFLNLKDAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ K E + D I + +++ + A++L K + Sbjct: 72 KRVLKAGAKAYKIIFSGVGKTKEELKLALEYDILYINLESEAEMMLLESVAKELRLKARI 131 Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168 R+NP+V ++ G + S G+ FH + Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 + ++ + +E +++ +GGG+ + + ++ Q + Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECEPDLYNYAQGILAQLHG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I +EPG +V + +VL K ++VD ++ + L + P Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFIVVDGAMNDLIRPSLYEAYHEIVLP 311 Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C +GD F + + GD + ++ Y + + +N N Sbjct: 312 YNQSEENLCDVVGGICESGDFFAKARSLPSTQSGDIMVVKNTGAYGFSMSSNYNTRNKVC 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + ++ D Sbjct: 372 ELALEEGQVRLIRQRENFQDQIA 394 >gi|150400645|ref|YP_001324411.1| diaminopimelate decarboxylase [Methanococcus aeolicus Nankai-3] gi|150013348|gb|ABR55799.1| diaminopimelate decarboxylase [Methanococcus aeolicus Nankai-3] Length = 435 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 68/398 (17%), Positives = 134/398 (33%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++ + +++ N K K + A K + + L G Sbjct: 30 GTPLYVMSESQIVKNFTRYTEAFKEYSEKTGKEFIVSYAYKANSNLAVLKILTNLGCGAD 89 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 S E+ +N ++ I + +N +++S+L + A K Sbjct: 90 VVSGGELYTAKMVSVDSSKIVFNGNCKLEEEIIMGIETNIRAFNVDSISELELINEVAGK 149 Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162 L K + RINP+V+ ++ G + E + + G+ Sbjct: 150 LGKVANVAFRINPNVNPKTHPKISTGLKSNKFGLDVEAGIALKAIKMAKEMKNVKIVGIH 209 Query: 163 FHNNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP----VKDFC 215 H + F K + +IE +++GGG+ KD Sbjct: 210 CHIGSQLTDISPFVEETKKVMDFVVSLKEQGIKIEDVNIGGGLGVPYDKNTEIPVQKDLA 269 Query: 216 QRLKEFSEKYS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHV 269 + +Y+ + +EPG ++V L V I E +++D+ + + Sbjct: 270 NAVINTMLEYADKVELPNLIIEPGRSLVATAGVLLGKVHHIKETPSAKWIMIDAGMNDMM 329 Query: 270 PDYLL--YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + Y E + G C + D+FG+ +++ D I+ DV Y Sbjct: 330 RPAIYEAYHEITPCTIRDEKEVVNIAGGLCESSDVFGKERELPKIEVKDTIAILDVGAYG 389 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 I+ N +N + + + + DG +Y D + Sbjct: 390 ISMANNYNARGISKMILTSEDGAYTIRERETYADLLSK 427 >gi|332529506|ref|ZP_08405464.1| diaminopimelate decarboxylase [Hylemonella gracilis ATCC 19624] gi|332041026|gb|EGI77394.1| diaminopimelate decarboxylase [Hylemonella gracilis ATCC 19624] Length = 440 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 119/400 (29%), Gaps = 40/400 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 TP ++ +Q +L+ L + ++ ALK ++ + + G Sbjct: 38 GTPLFVYSQQAMLDALAAYQRGLASRLAQGKARICYALKANSSLAILQLFARAGCGFDIV 97 Query: 59 SLYEVMLGHE--KFGGETHAYNVAYKDCEIDAVLS-----NCDTIIFNTVSQLNKFKDKA 111 S E+ V E+ L+ + ++L+ + A Sbjct: 98 SGGELERVLAAGGDPARVIFSGVGKTRAEMRQALNAGQGAGIGCFNVESEAELDVLNEVA 157 Query: 112 QKLHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLM 162 L K + +R+NP V ++ G + + V G+ Sbjct: 158 TALGKVAPVSIRVNPDVDAKTHPYISTGLKGNKFGIAHERAVAVYQHAARLPGLKVVGID 217 Query: 163 FHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219 H + + L+ ++ + + I LGGG+ L Sbjct: 218 CHIGSQITEERPYLDALERVLDLVEAIEAAGIPLHHIDLGGGLGIDYHG-DTPPAADALW 276 Query: 220 EFS-------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPD 271 I++EPG ++V N T VL + + + D+++ Sbjct: 277 HKLLARVDARGHADKAIFIEPGRSLVGNAGVCLTEVLYLKPGEQKNFCIVDAAMNDLPRP 336 Query: 272 YLLYQESATI-------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + + G V G C +GD G V+ GD+++ Sbjct: 337 AMYEAYHQIVPLAPREPAQAGGAVNYEVVGPICESGDWLGHDRALS-VQAGDQLAVLSAG 395 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y ++ + +N + D I + S D + Sbjct: 396 AYCMSMASNYNTRGRAAEVLVQGDQAILIRQRESAADSFR 435 >gi|217958996|ref|YP_002337544.1| diaminopimelate decarboxylase [Bacillus cereus AH187] gi|217065258|gb|ACJ79508.1| diaminopimelate decarboxylase [Bacillus cereus AH187] Length = 438 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLEAVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTLCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429 >gi|163939333|ref|YP_001644217.1| diaminopimelate decarboxylase [Bacillus weihenstephanensis KBAB4] gi|229132325|ref|ZP_04261179.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST196] gi|163861530|gb|ABY42589.1| diaminopimelate decarboxylase [Bacillus weihenstephanensis KBAB4] gi|228651031|gb|EEL07012.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST196] Length = 438 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ ++ I A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEMIMALQANIGCFVVDNFLELEILHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVK---------- 212 + F ++ + + + ++ +++GGG D Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVRERTHYVMKVLNVGGGFGIRYTDSDTPLTLETYVHAV 269 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + E V + ++ Sbjct: 270 TSTIREQFTLCEYPLPEIWVEPGRSIVGDAGTTLYTVGAVKEIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYGARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDINLPQVASSDLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 429 >gi|196047333|ref|ZP_03114547.1| diaminopimelate decarboxylase [Bacillus cereus 03BB108] gi|225863382|ref|YP_002748760.1| diaminopimelate decarboxylase [Bacillus cereus 03BB102] gi|196021844|gb|EDX60537.1| diaminopimelate decarboxylase [Bacillus cereus 03BB108] gi|225788611|gb|ACO28828.1| diaminopimelate decarboxylase [Bacillus cereus 03BB102] Length = 438 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ N+ G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNMLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLHQFLEGVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429 >gi|108757300|ref|YP_634066.1| diaminopimelate decarboxylase [Myxococcus xanthus DK 1622] gi|108461180|gb|ABF86365.1| diaminopimelate decarboxylase [Myxococcus xanthus DK 1622] Length = 413 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 50/368 (13%), Positives = 114/368 (30%), Gaps = 22/368 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ L ++ + + ++K + + + + G S Sbjct: 25 VGTPTYVYSTATLTRHIRVVTEAFGDRPHLICYSVKANSNLAILRLIAERGGGFDIVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ + ++ A+ + + +L ++L Sbjct: 85 ELARVRHVGGDAGKTVFAGVGKTQEEMEAALAAGILLFNVESAEELEALDAVGRRLGRRA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCEN 169 LR+NP V S+ G ++ + + GL H + Sbjct: 145 PFALRVNPDVDARTHRYISTGLKTSKFGVPFEEAVALYARAKKMKGLLAAGLDCHIGSQL 204 Query: 170 KSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSE 223 + + + + ++ +GGG+ T D ++ + + + Sbjct: 205 TQTAPIRAALSKVAGLYSALKEKGHPLAYLDVGGGLGITYLDETPPSPEEYARTVLAAAG 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---A 279 + LEPG A+V N L T VL + ++ V+VD+ + + L Sbjct: 265 ATGATLILEPGRALVGNAGVLLTRVLYRKKTPARHFVVVDAGMNDLLRPALYEAHHGLQP 324 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + V G C + D+ + + G+ +F Y ++ + +N Sbjct: 325 LVKRRGKAVEVDVVGPVCESTDVLAKARPLVLPQAGELFAFMSAGAYGMSMSSTYNSRPR 384 Query: 340 PTIAVKNV 347 P + + Sbjct: 385 PAEVLVDG 392 >gi|227890997|ref|ZP_04008802.1| diaminopimelate decarboxylase [Lactobacillus salivarius ATCC 11741] gi|227867406|gb|EEJ74827.1| diaminopimelate decarboxylase [Lactobacillus salivarius ATCC 11741] Length = 430 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 129/400 (32%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D K+ + + VK + A K F++ M+D + + G+ S Sbjct: 28 GTPTIVYDVAKIKEQIAKFKAGFEEENVKYHISYASKAFSSLAMYDLVAKSGIGSDVVSG 87 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ + + ++ K + SN II + +++ + + +K Sbjct: 88 GELYAALKGGMDPQELEFHGNNKSRAELEMAVDSNVGYIIVDNFYEIDLLNEVLTEKNKT 147 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I LR+ P + + S+ G E + + + V G+ H Sbjct: 148 ANILLRLAPGIHAETHEYISTGQAKSKFGFDLQSGQASEALEKTLANPRFKVLGVHSHIG 207 Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + ++ + + E ++LGGG D Sbjct: 208 SQIFATAGFVEAAKKLMDFLSAWREKYNFTAEVLNLGGGFGIRYTDQDEPLDVKDFVKII 267 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +KE S++ + ++EPG ++V TV + V + ++ Sbjct: 268 VEAVKEKSKELDYPMPAIWIEPGRSVVGEAGVSLYTVGSRKDVEDVGSFVAVDGGMGDNI 327 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + A + G+ C +GDI + + + GD I+ Sbjct: 328 RPALYGAEYDAVLAKDPNAPIAQNASIVGKFCESGDILIKDYDFPKTEPGDVIAMLSTGA 387 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +N P I ++ SY D N Sbjct: 388 YGYVMASNYNRNPRPAIVFVEDGKARLVVKRESYEDMIRN 427 >gi|148926410|ref|ZP_01810093.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni CG8486] gi|145844573|gb|EDK21679.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni CG8486] Length = 402 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 57/383 (14%), Positives = 123/383 (32%), Gaps = 22/383 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ + + K ++ A+K + + L G S+ EV Sbjct: 12 TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71 Query: 64 MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ K + A+ + I + +++ + A++L+ K + Sbjct: 72 KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131 Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168 R+NP+V ++ G + S G+ FH + Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGIEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 + ++ + +E +++ +GGG+ + + D+ Q + Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECESDLYDYAQGILAQLHG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I +EPG +V + +VL K V+VD ++ + L I P Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311 Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C +GD F + + D + ++ Y + + +N N Sbjct: 312 YNQGEESLCDVVGGICESGDFFAKARSLPSTQSDDIMVIKNTGAYGFSMSSNYNTRNKVC 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + ++ D Sbjct: 372 ELALEEGQVRLIRQRENFEDQIA 394 >gi|89897723|ref|YP_521210.1| hypothetical protein DSY4977 [Desulfitobacterium hafniense Y51] gi|219670871|ref|YP_002461306.1| diaminopimelate decarboxylase [Desulfitobacterium hafniense DCB-2] gi|89337171|dbj|BAE86766.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219541131|gb|ACL22870.1| diaminopimelate decarboxylase [Desulfitobacterium hafniense DCB-2] Length = 416 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 65/393 (16%), Positives = 115/393 (29%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N G K A+K + L + G SSL Sbjct: 21 GTPFHIYDEEAIRKNAQRLQAAFAWAPGFKEYFAVKALPNPYILKILGEEGFGADCSSLA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L E E I + ++ ++ + + Sbjct: 81 ELILAEKAGITEENIMLTSNNTPAEEFQKAKDLWAIINLDDITHIDYLEKHTGLPE--VL 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENK----- 170 S N S+ G + ++ K V H + Sbjct: 139 SFRYNPGSLRAGNAIIGNPEESKYGLTKEQLFQAYEIVRDKGVKRFGLHTMIISNELNPD 198 Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 M + ++E+++ GGGI + + + E K + Sbjct: 199 FFIETAEMMFDLAIELKEKLGIRLEFVNFGGGIGIPYRPEQEPVNLETIGEGVRKVYEEK 258 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 LE G I L T VL + KN + VD+S+ + + Sbjct: 259 IVAKGLDPLRICLECGRMITGPYGYLVTKVLHRKDTYKNYIGVDASMSDLMRPGIYGAYH 318 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F ++IGD + D + + Sbjct: 319 HITVMGKEDLPEDHIYDVTGSLCENNDKFAVDRELPRIEIGDTLVIHDTGAHGHAMGFNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG++K IR + DY+ L Sbjct: 379 NGKLRHAELLLQADGSVKLIRRAETLEDYFATL 411 >gi|302343308|ref|YP_003807837.1| diaminopimelate decarboxylase [Desulfarculus baarsii DSM 2075] gi|301639921|gb|ADK85243.1| diaminopimelate decarboxylase [Desulfarculus baarsii DSM 2075] Length = 420 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 63/385 (16%), Positives = 112/385 (29%), Gaps = 24/385 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + + + A+K + + + G S Sbjct: 25 VGTPTYVYAQSAMRAEFAAFQEAFAGLDHLICYAMKANSNKAVLGSFAAMGGGADIVSGG 84 Query: 62 EVMLGHE-KFGGETHAYNV-AYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ E Y+ D E++A + + +L A +L Sbjct: 85 ELARALAAGVPAERIVYSGVGKLDWELEAALKAGILMFNVESAQELTVLDQIAGRLGLKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 + LR+NP V ++ G V G+ H + Sbjct: 145 PVSLRVNPDVDAKTHPKITTGLAKNKFGLDMGLAFAQYLHAARLPNLVVKGVSCHIGSQL 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSE 223 F L+ + + ++E I LGGGI ++ RL+ E Sbjct: 205 TEVAPFVDALERLADLVQRLRREGLRLEIIDLGGGIGIRYNQETPPTPREYAARLRPVLE 264 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 +++ LEPG +V L T V + K+ V+VD+++ + A Sbjct: 265 GLGLKLVLEPGRRLVGEAGVLLTRVHYAKTTPAKHFVVVDAAMNDLIRPAFYDSFHAVRP 324 Query: 283 PNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 A V G C GD ++ GD ++ Y + +N Sbjct: 325 VAQNAGNGQRLVADVVGGICETGDFLVRERDLPVLRRGDLLAIMSAGAYGFAMSSQYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDY 362 + R S D Sbjct: 385 PRAAEVLVCGQEWAVVRRRESIEDL 409 >gi|258541957|ref|YP_003187390.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-01] gi|256633035|dbj|BAH99010.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-01] gi|256636092|dbj|BAI02061.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-03] gi|256639147|dbj|BAI05109.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-07] gi|256642201|dbj|BAI08156.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-22] gi|256645256|dbj|BAI11204.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-26] gi|256648311|dbj|BAI14252.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-32] gi|256651364|dbj|BAI17298.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654355|dbj|BAI20282.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-12] Length = 447 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 116/388 (29%), Gaps = 27/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP +++ L + +NAG V + A+K + + Q G S Sbjct: 46 VGTPCWVLGAGTLRARMRRMHTAMRNAGLDVSIHYAVKANDHLAILTLIGQEGFGADIVS 105 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL-- 114 E+ + ++ K A+ I + +L A KL Sbjct: 106 GGELARALKAGIPADRIVFSGVGKTDAELEQAISHGIGQINVESAEELEAISAIATKLGK 165 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNC 167 I LR+NP V ++ G +D G H Sbjct: 166 QATITLRVNPDVDAKTHAKITTGLAANKFGIPFQDAAALYAHAFTLPGVRPVGFATHIGS 225 Query: 168 ENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEF 221 + + + A + + + + GGG+ ++ +K Sbjct: 226 QILTTTPYRAAYARVAELVRTVRAAGNAVSVVDCGGGLGICYRNETEGQPEALAGAIKAE 285 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--DSSVEAHVPDYLLYQESA 279 V++ +EPG + L ++V+ E ++ + D+++ + + Sbjct: 286 LGGLGVKLAIEPGRWPIGPAGVLLSSVILRKEQGMDVPFLVLDAAMNELLRPSMYDAWHG 345 Query: 280 TIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + ++ A V G C +GD F P+ RI+ D Y + + Sbjct: 346 ILPLAPQAFSQPVSLAHVVGPVCESGDTFARDRLLPPLARNARIALLDTGAYGAVMSSTY 405 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDY 362 N + + + S + Sbjct: 406 NSRPLAAEVLVEDGQWQVIRQRQSVEEL 433 >gi|331702338|ref|YP_004399297.1| diaminopimelate decarboxylase [Lactobacillus buchneri NRRL B-30929] gi|329129681|gb|AEB74234.1| diaminopimelate decarboxylase [Lactobacillus buchneri NRRL B-30929] Length = 435 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 67/399 (16%), Positives = 132/399 (33%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP + D + + + + + ++ GV + A K FA MF +NQ S Sbjct: 31 KTPLVVYDVKSIRDQIHHFQKVFQDNGVDFAVSYASKAFACIAMFQLINQEKGHIDVVSG 90 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E +++ K E + II + +++ K+ + Sbjct: 91 GELYTAIKAGFPMERVSFHGNDKSREELEMAVEHQIGVIILDNFHEIDLLKEVLEDKQSH 150 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I LR+ P VS + S+ G + +E E N+ G+ H Sbjct: 151 INVMLRVTPGVSAHTHEYDQTGQVDSKFGFDIQSGQARKALGLVLEDERMNMLGIHCHIG 210 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKD--------F 214 + F + + +I + +++GGG + Sbjct: 211 SQIFEVNGFEMAAVKLIDTLADWNKEIGYVAKVVNVGGGFGIKYTEDDDPIAPEMFVDAI 270 Query: 215 CQRLKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K+ +E+ +++EPG +I TV + V + ++ Sbjct: 271 VKAIKKRTEEVNLPMPAVWIEPGRSIAGPAGYNLYTVGSRKDVPGIRSYVTVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GDI + + GD ++ D Sbjct: 331 RPALYQAKYEAVLAKDPSAPIKETVRIAGKYCESGDILIQKQDLPATQPGDVLAMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N P + + AIR ++ D Sbjct: 391 YGYAMASNYNRNPRPAVVFVENGKSQVAIRRETFEDLVA 429 >gi|304412536|ref|ZP_07394142.1| diaminopimelate decarboxylase [Shewanella baltica OS183] gi|307307195|ref|ZP_07586933.1| diaminopimelate decarboxylase [Shewanella baltica BA175] gi|304349178|gb|EFM13590.1| diaminopimelate decarboxylase [Shewanella baltica OS183] gi|306910434|gb|EFN40865.1| diaminopimelate decarboxylase [Shewanella baltica BA175] Length = 414 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 61/382 (15%), Positives = 111/382 (29%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K A + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFNNAVADHPHLICYAVKANANLAVLNVLARLGSGFDIVSGGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + E ++ K A+ + ++L + A +L K Sbjct: 86 LARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIYCFNVESSAELEQLNLVAGRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNC--- 167 + LRINP V ++ G + NV G+ H Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEIVFARAHALPHLNVKGVDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 E K FL + + IE +GGG+ T + + Sbjct: 206 EIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDAETPPHPDVYAAAILARLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + + K IVD ++ + L Sbjct: 266 RQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + ++ Y + G C GD G+ ++ Y + +N Sbjct: 326 VPRDSEAYEFDIVGPVCETGDFLGKNRQLALAAGD-LLAVRSSGAYGFAMASNYNTRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + + + Sbjct: 385 AEVMVDGEQAFLVREREKLSQL 406 >gi|302536936|ref|ZP_07289278.1| diaminopimelate decarboxylase [Streptomyces sp. C] gi|302445831|gb|EFL17647.1| diaminopimelate decarboxylase [Streptomyces sp. C] Length = 463 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 122/398 (30%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D++ + + A K F + + L + S E Sbjct: 63 GTPAYFLDEEDFRARCRAWAHAFGK-DADVFYAGKAFLSKAVVKWLKEEGLNLDVCSGGE 121 Query: 63 VMLGHEK-FGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + E A++ K A+ + I+ ++ ++ + A++L + Sbjct: 122 LATALAAEMPAERIAFHGNNKSESEIRRAITAGVGRIVLDSFQEIARVAHIARELGVRQP 181 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + +R+ V + G D + + + G+ H + Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIAVADGSAAEAVRRALGHDSLELLGVHSHIGSQ 241 Query: 169 NKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLK 219 F K + + ++ I LGGG+ P + + Sbjct: 242 IFDMAGFEVSAKRVVRLLAAVRDEHGVELPEIDLGGGLGIAYTSADDPREPHEIAKALTE 301 Query: 220 EFSEKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + + +I +EPG AIV T V I + V VD + ++ Sbjct: 302 IVARECESAGLKAPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E A + P V G+ C +GDI + F + GD ++ Y Sbjct: 362 ALYDAEYAVTLVSRVSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLLAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D + Sbjct: 422 CRSMASNYNHALRPPVVAVRDGAARVIVRRETEEDLLS 459 >gi|205356036|ref|ZP_03222804.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346160|gb|EDZ32795.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni CG8421] Length = 402 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 57/383 (14%), Positives = 123/383 (32%), Gaps = 22/383 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ + + K ++ A+K + + L G S+ EV Sbjct: 12 TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71 Query: 64 MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ K + A+ + I + +++ + A++L+ K + Sbjct: 72 KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131 Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168 R+NP+V ++ G + S G+ FH + Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 + ++ + +E +++ +GGG+ + + D+ Q + Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECESDLYDYAQGILAQLHG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I +EPG +V + +VL K V+VD ++ + L I P Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311 Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C +GD F + + D + ++ Y + + +N N Sbjct: 312 YNQGEESLCDVVGGICESGDFFAKARSLPSTQSDDIMVIKNTGAYGFSMSSNYNTRNKVC 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + ++ D Sbjct: 372 ELALEEGQVRLIRQRENFEDQIA 394 >gi|300775431|ref|ZP_07085293.1| diaminopimelate decarboxylase [Chryseobacterium gleum ATCC 35910] gi|300506171|gb|EFK37307.1| diaminopimelate decarboxylase [Chryseobacterium gleum ATCC 35910] Length = 400 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 71/385 (18%), Positives = 119/385 (30%), Gaps = 26/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + + + K A K + + S+ E Sbjct: 14 GTPVYVYDAESIKIQYEKLTSSF-LKHTKFFYAAKALTNINILKYVKNLGASLDCVSINE 72 Query: 63 VMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V LG F E + D EI+ ++ I + +S L +F +K I + Sbjct: 73 VKLGLKAGFPKEKILFTPNCVDLAEIEEAMTFGVHINIDNISILEQFGNKYGN-SYPILV 131 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSFLC 174 RINP + S+ G S NV GL H E K Sbjct: 132 RINPHIFAGGNYKISTGHIDSKFGISIHQVRHIERVMKSTNLNVEGLHMHTGSEIKDPDV 191 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224 F L + E ++++ +G G +D + + L + EK Sbjct: 192 FLQALDIML-ELSEHFPNLKYLDMGSGFKIPYQDSEEETDVKTLGKKVEKVISEFSKSTG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLL--YQESATI 281 +++ EPG+ +V + L I + + + V+S + Y + Sbjct: 251 KKFELWFEPGKFLVGKSGYLLVKANVIKQTTATVFVGVNSGFNHLIRPMFYDSYHMIENL 310 Query: 282 YPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 G V G C D F V+ GD ++F + Y + FN P Sbjct: 311 SNPKGAERIYTVVGNICET-DTFAWDRKLNEVREGDILAFHNAGAYGFEMSSNFNSRLKP 369 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D N Sbjct: 370 AEVLFLDGKAHLIRKRDEFEDLLRN 394 >gi|225012701|ref|ZP_03703136.1| diaminopimelate decarboxylase [Flavobacteria bacterium MS024-2A] gi|225003234|gb|EEG41209.1| diaminopimelate decarboxylase [Flavobacteria bacterium MS024-2A] Length = 408 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 27/384 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 P Y+ D K+ K +++ A K + + + + G + S+ EV Sbjct: 16 PVYVYDANKIEQQFTRLQNAFKGVEKLRINYACKALSNLSILGLMKKMGSGLDTVSIQEV 75 Query: 64 MLG-HEKFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 +G F + + E I + +S L +F K + + +R Sbjct: 76 QMGIKAGFKPKDIIFTPNGVSLEEIEKAAKIGVQINIDNLSILEQFGTK--HPNIPVCIR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175 INP V S+ G ++NG+ H + F Sbjct: 134 INPHVMAGGNSNISVGHIDSKFGISIHQIPHVLRIVENTKMHINGVHMHTGSDILDIEVF 193 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230 + I + +E++ G G ++ ++ + L E + + Sbjct: 194 LYASE-ILFDTALQFKNLEFLDFGSGFKVPYREGDIETNIEELGEKLTERFHRFCETYGS 252 Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPN 284 EPG+ +V+ V + + VDS + L + Sbjct: 253 TLELAFEPGKFLVSQAGYFLVQVNAVKQTTSTVFAQVDSGFNHLIRPMLYGSHHEIKNIS 312 Query: 285 T---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C D FG + GD ++F++ Y + +N P Sbjct: 313 KPNGKERFYTVVGYICET-DTFGSNRKIAEISEGDILAFQNAGAYCFTMASNYNSRFRPA 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365 + + + ++ D N Sbjct: 372 EILWYNNQAHVIRKRETFEDLVYN 395 >gi|121612594|ref|YP_001000024.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|167004982|ref|ZP_02270740.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|87250310|gb|EAQ73268.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] Length = 402 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 57/379 (15%), Positives = 123/379 (32%), Gaps = 22/379 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ + + K ++ A+K + + L G S+ EV Sbjct: 12 TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71 Query: 64 MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ K + A+ + I + +++ + A++L+ K + Sbjct: 72 KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131 Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168 R+NP+V ++ G + S G+ FH + Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 + ++ + +E +++ +GGG+ + + D+ Q + Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECESDLYDYAQGILAQLHG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I +EPG +V + +VL K V+VD ++ + L I P Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311 Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C +GD F + + GD + ++ Y + + +N N Sbjct: 312 YNQAQESLCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVC 371 Query: 342 IAVKNVDGTIKAIREFSYN 360 + ++ Sbjct: 372 ELALEEGQVRLIRQRENFE 390 >gi|86151380|ref|ZP_01069595.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 260.94] gi|86153859|ref|ZP_01072062.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13] gi|157414611|ref|YP_001481867.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 81116] gi|315123882|ref|YP_004065886.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841727|gb|EAQ58974.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 260.94] gi|85842820|gb|EAQ60032.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13] gi|157385575|gb|ABV51890.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 81116] gi|307747251|gb|ADN90521.1| Diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni M1] gi|315017604|gb|ADT65697.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315931609|gb|EFV10575.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 327] Length = 402 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 56/379 (14%), Positives = 123/379 (32%), Gaps = 22/379 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ + + K ++ A+K + + L G S+ EV Sbjct: 12 TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71 Query: 64 MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ K + A+ + I + +++ + A++L+ K + Sbjct: 72 KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131 Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168 R+NP+V ++ G + S G+ FH + Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 + ++ + +E +++ +GGG+ + + ++ Q + Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECEPDLYNYAQGILAQLHG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I +EPG +V + +VL K V+VD ++ + L I P Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311 Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C +GD F + + GD + ++ Y + + +N N Sbjct: 312 YNQAQESLCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVC 371 Query: 342 IAVKNVDGTIKAIREFSYN 360 + ++ Sbjct: 372 ELALEEGQVRLIRQRENFE 390 >gi|306819981|ref|ZP_07453632.1| diaminopimelate decarboxylase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552017|gb|EFM39957.1| diaminopimelate decarboxylase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 427 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 73/397 (18%), Positives = 137/397 (34%), Gaps = 34/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ ++ +++ K V++ A K F M L ++ S Sbjct: 25 GTPLYVYSYDSIVAEMNSLKKDFKQKYENVRIAYASKAFNCIAMCQILKKHSLCLDVVSG 84 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKF--KDKAQKLH 115 E+ F E +N K E + II + + +++ KA+ Sbjct: 85 GELYTAIKANFPAEHIEFNGNNKSTEELEMAIDYGVGRIIIDGLFEIDIIEEICKAKDKK 144 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + RINP V + S+ G + ++SE N GL FH Sbjct: 145 VNVLFRINPGVDSHTNEKISTGKIDSKFGIPTDEDVFFPLVQRALKSEYINFLGLHFHVG 204 Query: 167 CE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH--------FTDKDYPVKDF 214 + + L +L+ EK F +++ I+LGGG + Sbjct: 205 SQLFDNSSHILATDVVLELAEKIREKFDFELKEINLGGGFGVVYTDEKKMPYSYFLDPLM 264 Query: 215 CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDY 272 + + + K + +EPG +++ + V I + V + ++ Sbjct: 265 EKIEQYYKGKKRPAVVIEPGRSLIGESGFQLYKVGQIKDIKDVRKYVSVDGGMTDNIRPT 324 Query: 273 LLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 L + + + N + +CG+ C +GDI + V+ D I+ Y Sbjct: 325 LYDAKYSAMIVNKADKVKEESVTICGKCCESGDILIKDISLPKVEKDDIIAIFTTGAYGY 384 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N +N +P + + + + IR SY+D N Sbjct: 385 AMANNYNKTRIPAVVMIKDNDVFEIIRRQSYDDIIKN 421 >gi|329929809|ref|ZP_08283485.1| diaminopimelate decarboxylase [Paenibacillus sp. HGF5] gi|328935787|gb|EGG32248.1| diaminopimelate decarboxylase [Paenibacillus sp. HGF5] Length = 444 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 133/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+Q + N + K +G ++ A K F M ++ S Sbjct: 30 GTPLYIVDEQSVRNRCREYIEAFKASGLKFQVAYASKAFCVMAMCRLADEEGMSLDVVSD 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F + ++ K E + + + + V +L+ + A + ++ Sbjct: 90 GELYTALQAGFPADRIHFHGNNKTPEEIEMALDAEIGCFVVDNVIELHMLQAIAAEKNRK 149 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I LR+ P V + S+ G E + ++ G+ H Sbjct: 150 VNILLRVTPGVEAHTHEYISTGQTDSKFGFDIGNGSAYEAVQLAEAQANIHLMGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + F ++ + + + ++LGGG D + + + Sbjct: 210 SQIFEVEGFQMAVQRVAEFAASVKEGLGVVFKVVNLGGGFGIRYVDGDTPLQVSQYVKAI 269 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + +I++EPG +IV + T TV + V + + Sbjct: 270 TDAVKNHFAGLGSELPEIWVEPGRSIVGDAGTTLYTVGTSKDIPGVRKYVAVDGGMTDNP 329 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A T + G+ C +GD+ V+ GD ++ Sbjct: 330 RPALYESKYEALLANRAKEEPEETVSIAGKCCESGDMLIWDLELPKVETGDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P + + +R S D +N Sbjct: 390 YNYSMASNYNRIRKPAVVFVKDGQSNLVVRRESLADIISN 429 >gi|261405994|ref|YP_003242235.1| diaminopimelate decarboxylase [Paenibacillus sp. Y412MC10] gi|261282457|gb|ACX64428.1| diaminopimelate decarboxylase [Paenibacillus sp. Y412MC10] Length = 444 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 133/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+Q + N + K +G ++ A K F M ++ S Sbjct: 30 GTPLYIVDEQSVRNRCREYIEAFKASGLKFQVAYASKAFCVMAMCRLADEEGMSLDVVSD 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F + ++ K E + + + + V +L+ + A + ++ Sbjct: 90 GELYTALQAGFPADRIHFHGNNKTPEEIEMALDAEIGCFVVDNVIELHMLQAIAAEKNRK 149 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I LR+ P V + S+ G E + ++ G+ H Sbjct: 150 VNILLRVTPGVEAHTHEYISTGQTDSKFGFDIGNGSAYEAVQLAEAQANIHLMGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + F ++ + + + ++LGGG D + + + Sbjct: 210 SQIFEVEGFQMAVQRVAEFAASVKEGLGVVFKVVNLGGGFGIRYVDGDTPLQVSQYVKAI 269 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + +I++EPG +IV + T TV + V + + Sbjct: 270 TDAVKNHFAGLGSELPEIWVEPGRSIVGDAGTTLYTVGTSKDIPGVRKYVAVDGGMTDNP 329 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A T + G+ C +GD+ V+ GD ++ Sbjct: 330 RPALYESKYEALLANRAKEEPEETVSIAGKCCESGDMLIWDLELPKVETGDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P + + +R S D +N Sbjct: 390 YNYSMASNYNRIRKPAVVFVKDGQSNLVVRRESLADIISN 429 >gi|302521927|ref|ZP_07274269.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78] gi|318060725|ref|ZP_07979448.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actG] gi|318075515|ref|ZP_07982847.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actF] gi|302430822|gb|EFL02638.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78] Length = 465 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 113/398 (28%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D++ G + A K F + + L++ S E Sbjct: 65 GTPAYFLDEEDFRARCRDWRSAFGE-GADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 123 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 ++ A++ K I+ ++ +L + AQ L + Sbjct: 124 LLTALDAGMPAARIAFHGNNKTAAEIERAVAAGVGRIVVDSFQELVRVAHTAQALGRVQR 183 Query: 120 --LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 +R+ V + G E + + + + G+ H + Sbjct: 184 VQIRVTVGVEAHTHEFIATAHEDQKFGLALAGGQAAEAVRRALTLDGIELVGIHSHIGSQ 243 Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F + + ++ I LGGG+ + + Sbjct: 244 IFDMAGFEVSARRVVGLLAEIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALGD 303 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG AIV T V I + V VD + ++ Sbjct: 304 IVTRECESAGLAVPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 363 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E A+ + P V G+ C +GDI F + GD ++ Y Sbjct: 364 ALYDAEYSVALASRTSDAAPMLVRVVGKHCESGDIVVRDAFLPADLAPGDLLAVPATGAY 423 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D Sbjct: 424 CRSMASNYNHALRPPVVAVRDGQARVVVRRETEEDLLR 461 >gi|220929933|ref|YP_002506842.1| diaminopimelate decarboxylase [Clostridium cellulolyticum H10] gi|220000261|gb|ACL76862.1| diaminopimelate decarboxylase [Clostridium cellulolyticum H10] Length = 416 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 59/392 (15%), Positives = 112/392 (28%), Gaps = 32/392 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ +++ L + + ++K + + + + + S E Sbjct: 25 GSPLYVYNEKILRQKCRDMKNLVEYKNFVPNYSIKANSNLSLIKIVKEEGLRADAMSAGE 84 Query: 63 V-MLGHEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + +L H F E + + E+ + N + +++SQL K + Sbjct: 85 IQLLLHAGFEPEELFFVPNNVSESELKYAVDNGVLVSVDSLSQLELLGKI--NTGGKAAV 142 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKC------KDKIESEIKNVNGLMFHNNCENKSFLC 174 R NP V ++ G K+ + G+ H Sbjct: 143 RFNPGVGAGHHEKVVTAGKKTKFGVNIDCVDQVKEIAGKYNMKICGVNQHIGS-LFMEGD 201 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----------LKEFSEK 224 I+++ +GGG + L+++++K Sbjct: 202 SYIEGVKSLLSVAEQFEDIDFVDMGGGFGIPYNKQEGQKPLDLASFKEKLTQVLEQWTDK 261 Query: 225 YSVQIYL--EPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 Y +I EPG IV + + V V D + Sbjct: 262 YGKKILFKTEPGRYIVAESGVILGNVYTTKANYGNKYVGTDIGFNVLARPVMYDSHHDIE 321 Query: 282 YPNTGP-------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 G V G C +GDI + +K GD + D Y + + Sbjct: 322 VYRNGKPLNEAETEEVTVVGNICESGDIIAKNRKLPVIKEGDILGIMDAGAYGFAMSSNY 381 Query: 335 NGINMPTIAVKNVDGT-IKAIREFSYNDYYNN 365 N P + DG R ++ D N Sbjct: 382 NMRLRPAEVLIKEDGEPTLIRRRDTFEDLIAN 413 >gi|146299915|ref|YP_001194506.1| diaminopimelate decarboxylase [Flavobacterium johnsoniae UW101] gi|146154333|gb|ABQ05187.1| diaminopimelate decarboxylase [Flavobacterium johnsoniae UW101] Length = 407 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 119/386 (30%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D +K+ + + +++ A+K + + L G + S+ Sbjct: 14 GSPLYVYDAEKIQSQYNRLTKAFSKVENLRVNYAMKALSNVAILQLLKNMGSGLDTVSIQ 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV+LG + E + E ++ I + +S L +F K H + Sbjct: 74 EVLLGLHAGYEPERIFFTPNGVSLEEIEEVAAMGVQINIDNLSILEQFGTK--HPHIPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173 +RINP V S+ G ++ G+ H + Sbjct: 132 IRINPHVMAGGNANISVGHIDSKFGISVHQIPHILRIVENTKMSIVGIHMHTGSDILDIE 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229 F + I + ++++ G G K ++ + L + K Sbjct: 192 VFLYAAE-ILFDTAKHFKDLQFLDFGSGFKVPYKKDDIETDIEELGKKLSKRFNAFCAEY 250 Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280 EPG+ +V+ V + + VDS + L Sbjct: 251 GRDLTLIFEPGKFLVSEAGHFLVKVNVVKQTTSTVFAGVDSGFNHLIRPMLYGSSHHIEN 310 Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I G V G C D F + + GD +SF + Y + + +N Sbjct: 311 ISNPKGKERFYSVVGYICET-DTFANNRRIQEITEGDILSFRNAGAYCFSMSSNYNSRYK 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + I + ++ D N Sbjct: 370 PAEVLWMNGQGILIRQAETFEDLLKN 395 >gi|295692736|ref|YP_003601346.1| diaminopimelate decarboxylase [Lactobacillus crispatus ST1] gi|295030842|emb|CBL50321.1| Diaminopimelate decarboxylase [Lactobacillus crispatus ST1] Length = 436 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 122/398 (30%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ + + + + A K FAA ++ + + T S Sbjct: 31 GTPLVVYDVDQIRRQIRAFKKVFEEENMAYAVSYASKAFAAIAIYQVIAEEGAYTDVVSA 90 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E +++ K + ++ II + ++ Sbjct: 91 GELFTAIKANFPMERVSFHGNNKSLTELEMAVKNHVGKIIIDNFHEIQLLAQVLKKYDAT 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G + + + + G+ H Sbjct: 151 ISVMLRIAPGISAHTHEYDQTGQIDSKFGFDLESGQAEKALKQVLANPRMKMLGIHAHIG 210 Query: 167 CENKSFLCFSAMLKNIE----KEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + + F + + + + I++GGG Sbjct: 211 SQIFALNGFEMAAQKLMVVAQDWREKYGYLAQVINVGGGFGIKYTQEDHPLRPEEFVKTI 270 Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K +EK + I +EPG +IV TV + + + ++ Sbjct: 271 VKVIKTEAEKMNYPLPEIDIEPGRSIVGPAGYNLYTVGSRKDIPGYRSYITVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ + G+ C +GDI E VK GD ++ D Sbjct: 331 RPALYQAKYETVLATDPQAPLTEHVRIAGKYCESGDILAEDQALPQVKAGDLLAMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N + P + I+ S D Sbjct: 391 YGYSMASNYNRNSRPAVVFAENGKAKLVIKRESLEDLV 428 >gi|289435300|ref|YP_003465172.1| hypothetical protein lse_1939 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171544|emb|CBH28090.1| lysA [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 436 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 58/404 (14%), Positives = 126/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 92 GELYTAIKAGFPAERIHFHGNNKSVEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAESAIKQVLHASAAFDLIGLHCHI 211 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F + I + + + ++LGGG + + +++ Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271 Query: 221 FSEKYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 E+ +I++EPG ++V T V E V + + Sbjct: 272 IMEEVRDVANTNDIAIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYVAVDGGMSDN 331 Query: 269 VPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 332 IRPALYDAHYDAVLAANPEKVPEETVAIAGKCCESGDMLIWDLPLPKSDAGEILAVFCTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 392 AYGYAMASNYNRIPRPPVVFVEDGVDKLVVARETYENLVQNDLS 435 >gi|167769427|ref|ZP_02441480.1| hypothetical protein ANACOL_00757 [Anaerotruncus colihominis DSM 17241] gi|167668395|gb|EDS12525.1| hypothetical protein ANACOL_00757 [Anaerotruncus colihominis DSM 17241] Length = 435 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 59/401 (14%), Positives = 114/401 (28%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ ++ + + + A K F + G S Sbjct: 32 GTPLYVMDEDEIRRACASYRGSIERYYGGRGLVTYASKAFCCKAACKIAAEEGLGLDVVS 91 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKL 114 E+ F E ++ K + +A+ I+ + +L A + Sbjct: 92 GGELYTAISANFPAERIFFHGNNKTVQELTEALAYGVGQIVVDNFDELETLNQLALSRGE 151 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHN 165 I RI P + + S+ G + + + + G+ H Sbjct: 152 PANILFRIKPGIDAHTHDFVRTGQIDSKFGLALETGEAMRAVQTALSMQGVRLRGVHCHI 211 Query: 166 NCENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221 + F + + ++E + LGGG R + Sbjct: 212 GSQIFDIEPFEHAAEVMLGFIADVRDQTGCELEILDLGGGFGIKYLPEHDPVEYDRYMQR 271 Query: 222 SEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSS 264 + + I +EPG +I T + E + + Sbjct: 272 VARTVQRVSAARGVKTPFIVIEPGRSIAGPAGVTLYTAGAVKEIPGVRTYVSIDGGMCDN 331 Query: 265 VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + A T + G+ C +GD+ GE + V GD I+ Sbjct: 332 PRYILYRSEYEAMVANKASQPKTRTVTLAGKCCESGDLIGEGMQIQDVHPGDIIAVLATG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + +N I P + + ++ +Y D N Sbjct: 392 AYNYAMSSNYNRIPRPPVVMLRGGQARVVVKRETYEDLVRN 432 >gi|228996629|ref|ZP_04156268.1| Diaminopimelate decarboxylase [Bacillus mycoides Rock3-17] gi|229004278|ref|ZP_04162079.1| Diaminopimelate decarboxylase [Bacillus mycoides Rock1-4] gi|228757139|gb|EEM06383.1| Diaminopimelate decarboxylase [Bacillus mycoides Rock1-4] gi|228763261|gb|EEM12169.1| Diaminopimelate decarboxylase [Bacillus mycoides Rock3-17] Length = 449 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 123/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ + + +G ++ A K F M + S Sbjct: 41 GTPLYVYDEASIREKCRAFHRAFQESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F ++ K E A+ ++ + + ++ D AQ+ Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQADVGCFVVDNFFEMEILHDLAQQYGKI 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + +E NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSAGQAMQAIRIALEKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------KDF 214 + F ++ + + +++GGG + Sbjct: 221 SQIFETAGFVRAVEVLHNFLEEIREQTGYVVTVLNVGGGFGIRYTEADTPLTLETYVHAV 280 Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 ++E + + I++EPG +IV + T TV + + V + ++ Sbjct: 281 TDAVREQFTRNNYPLPEIWIEPGRSIVGDAGTTIYTVGAVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N G + G+ C +GD+ V D ++ Sbjct: 341 RPALYGARYEAMLANRGKEEAEEVVSIAGKCCESGDMLIWDIELPQVATADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGASQIVVERETYENIIGN 440 >gi|194689552|gb|ACF78860.1| unknown [Zea mays] Length = 439 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 117/386 (30%), Gaps = 27/386 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P+YL K ++L N + + A+K + L + G S E+ Sbjct: 45 SPFYLYSKLQILRNFAAYRDALQGLRSIVGYAVKANNNLPVLRVLRELGCGAVLVSGNEL 104 Query: 64 MLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119 L F +N ++ + + ++ L +A + Sbjct: 105 RLALQAGFDPARCIFNGNGKTLEDLKLAAESGVFVNVDSEFDLENIVRAARATGKKVPVL 164 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171 LRINP V S+ G + + S + G+ H Sbjct: 165 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLNSIKSYSNEIKLVGVHCHLGSTITK 224 Query: 172 FLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSE 223 F + ++E++++GGG+ D ++E Sbjct: 225 VDIFRDAAVLMVNYVDEIRAQGFKLEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVL 284 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIY 282 + + +EPG +++ NT V + N IV A + L Sbjct: 285 SQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIEL 344 Query: 283 PNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + T + G C + D G+ G + D Y ++ + +N Sbjct: 345 VSPPTPGAEVATFDIVGPVCESADFLGKDRELPTPDEGAGLVVHDAGAYCMSMASTYNLK 404 Query: 338 NMPTIAVKNVDGTIKAIR-EFSYNDY 362 P DG+I IR E +DY Sbjct: 405 LRPPEYWVEEDGSIVKIRHEEKLDDY 430 >gi|308183818|ref|YP_003927951.1| carboxynorspermidine decarboxylase [Helicobacter pylori SJM180] gi|308059738|gb|ADO01634.1| carboxynorspermidine decarboxylase [Helicobacter pylori SJM180] Length = 405 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 137/400 (34%), Positives = 209/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N + + +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVCQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITKSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F FEKP+K GD+I F+D+ Sbjct: 306 LKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEKPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404 >gi|228990529|ref|ZP_04150494.1| Diaminopimelate decarboxylase [Bacillus pseudomycoides DSM 12442] gi|228769055|gb|EEM17653.1| Diaminopimelate decarboxylase [Bacillus pseudomycoides DSM 12442] Length = 449 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 123/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ + + +G ++ A K F M + S Sbjct: 41 GTPLYVYDEASIREKCRAFHRAFQESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F ++ K E A+ ++ + + ++ D AQ+ Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQADVGCFVVDNFFEMEILHDLAQQYGKI 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + +E NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSAGQAMQAIRIALEKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------KDF 214 + F ++ + + +++GGG + Sbjct: 221 SQIFETAGFVRAVEVLHNFLEEIREQTGYVVTVLNVGGGFGIRYTEADRPLTLETYVHAV 280 Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 ++E + + I++EPG +IV + T TV + + V + ++ Sbjct: 281 TDAVREQFTRNNYPLPEIWIEPGRSIVGDAGTTIYTVGAVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N G + G+ C +GD+ V D ++ Sbjct: 341 RPALYGARYEAMLANRGKEEAEEVVSIAGKCCESGDMLIWDIELPQVATADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGASQIVVERETYENIIGN 440 >gi|228475964|ref|ZP_04060672.1| diaminopimelate decarboxylase [Staphylococcus hominis SK119] gi|228269787|gb|EEK11267.1| diaminopimelate decarboxylase [Staphylococcus hominis SK119] Length = 421 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 65/394 (16%), Positives = 127/394 (32%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ N + + +G+K + A K F M + + S Sbjct: 26 GTPTIVYDEDEIRNQMRRFHNAFQKSGLKYNISYASKAFTCIQMVKLVQEENLQLDVVSE 85 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K S + +++ ++ A Sbjct: 86 GELYTALEAKFDPSRIHFHGNNKTKREIQYALESGVGYFVIDSLEEIELIDRYASDTVNV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + +R+NP V + S+ G + S+ ++ G+ FH + Sbjct: 146 V-IRVNPGVEAHTHEFIQTGQEDSKFGLSIRHGLAIQAVEKVKASKHLHLKGIHFHVGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKE 220 + K + Q+E ++LGGG + V + +K Sbjct: 205 IEGTEAMIETAKIVLNWLNEHHIQVELLNLGGGFGIKYVEGDVSFPIEEGIAEITDAIKS 264 Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275 SEK + + +EPG +IV V I + + V + H+ L Sbjct: 265 ESEKLNYDVPEIGIEPGRSIVGEAGITLYEVGTIKDIPEVNKYVSIDGGMSDHIRTALYG 324 Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 + + T + G+ C +GDI VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRHEEADETVTIAGKLCESGDIIIRDAMLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P + + I+ S N Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|257892663|ref|ZP_05672316.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,408] gi|257829042|gb|EEV55649.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,408] Length = 419 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 62/394 (15%), Positives = 130/394 (32%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y+ D++K+ + + K+ K+L A K F M +++Y G S Sbjct: 19 KTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEMLRLVHEYGFGLDVVSG 78 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115 E+ + F + ++ K E + + ++ + + ++ ++ + Sbjct: 79 GEIYTALQADFPKDAIYFHGNNKTPEELSYALENELLHVVADNLMEVELLEELSQRYSKK 138 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + LR+N V S+ G + ES + G H Sbjct: 139 VDVMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + A + + F + ++LGGG + + +Y+ Sbjct: 199 SQIFDVTAWLAEIDKLTSYLTDFDQPLS-LNLGGGFGIRYTQNDQPIPIEEALKKLIEYT 257 Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274 Q+ +EPG +IV T T+ I + D + ++ L Sbjct: 258 EESLDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317 Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 A + G+ C +GD+ + + K GD ++ Y + Sbjct: 318 QAAYDCDLAEKLSEEKTEKVTIAGKMCESGDVVIKETYLPKAKSGDLLAVYSTGAYGYSM 377 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + N + +R +++D Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLVVRRQAFSDLLR 411 >gi|15893897|ref|NP_347246.1| diaminopimelate decarboxilase, lisA [Clostridium acetobutylicum ATCC 824] gi|15023479|gb|AAK78586.1|AE007576_2 Diaminopimelate decarboxilase, lisA [Clostridium acetobutylicum ATCC 824] gi|325508024|gb|ADZ19660.1| Diaminopimelate decarboxilase, lisA [Clostridium acetobutylicum EA 2018] Length = 431 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 67/399 (16%), Positives = 127/399 (31%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ + N K ++ A K F M + + S Sbjct: 29 GTPLYVIDEKLVRQNCKEYYENFKVKEKKNRVAYAGKAFLPIAMCQIIKEEGLSLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F E ++ K + + N + + ++ K + A+K+ Sbjct: 89 GELYTAYKAGFNMENVLFHGNNKTIDEMEMGVRLNVGRFVADNFYEIEKVNEIAKKMGKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 +K+ LRI P + + S+ G K+ + + ++GL H Sbjct: 149 QKVFLRITPGIEAHTHEYIKTGQIDSKFGFTLSNGDALKAVKEVLNFQNVELSGLHCHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + ML I++ +I+ + LGGG + + Sbjct: 209 SQIFDIAPYLEETRVMLAFIKEIQKETNYEIKELDLGGGFGIYYTEVDKPRGAEEFCSAI 268 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 K ++ +EPG +I+ N + TV I E V + ++ Sbjct: 269 LKEAEESSKKLGVKLPKLIIEPGRSIIGNAGSTLYTVGSIKEIQHMRKYVSVDGGMTDNI 328 Query: 270 PDYLLYQESATIYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L E N + G+ C +GDI V+ GD + Y Sbjct: 329 RPSLYNAEYECEIANKFNASKEKVTISGKCCESGDILINDVNISEVESGDILVVSTTGAY 388 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + N +N I + + + + +Y +N Sbjct: 389 GYSMSNNYNKIPKAAVVLVSDGKERLICKRETYEHMLSN 427 >gi|313632593|gb|EFR99586.1| diaminopimelate decarboxylase [Listeria seeligeri FSL N1-067] Length = 436 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 58/404 (14%), Positives = 126/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 92 GELYTAIKAGFPAERIHFHGNNKSVEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEAAIKQVLHASAAFDLIGLHCHI 211 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F + I + + + ++LGGG + + +++ Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271 Query: 221 FSEKYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 E+ +I++EPG ++V T V E V + + Sbjct: 272 IMEEVRDVANANDIAIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYVAVDGGMSDN 331 Query: 269 VPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 332 IRPALYDAHYDAVLAANPEKVPEETVAIAGKCCESGDMLIWDLPLPKSDAGEILAVFCTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 392 AYGYAMASNYNRIPRPPVVFVEDGVDKLVVARETYENLVQNDLS 435 >gi|254300613|ref|ZP_04968058.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 406e] gi|157810592|gb|EDO87762.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 406e] Length = 423 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 118/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L + + +A+K + G+ + + G S E Sbjct: 28 GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + G ++ K D A+ + ++ +L++ A L Sbjct: 88 LARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170 + LR+NP V ++ G D + V G+ H + Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + ++ + QI + +GGG+ T D D ++ + Sbjct: 208 ELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGITYDDETPPDIGAYVRAVLARIDA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I+ EPG ++ N L T V + + KN IVD+++ + A Sbjct: 268 RGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327 Query: 281 I----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + + G C +GD G + G ++ Y + +N Sbjct: 328 VPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-IAPGGLLAIRSAGAYGFTMSSNYNT 386 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFE 414 >gi|328880398|emb|CCA53637.1| Diaminopimelate decarboxylase [Streptomyces venezuelae ATCC 10712] Length = 489 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 124/397 (31%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ ++ T ++ A K F + + + G S E Sbjct: 91 GTPAYVLDEAEVRERCRTYRNAF--PDAEIHYAAKAFLCRALVHWVEEEGLGLDVCSAGE 148 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118 + L F E + K + A+ I+ +T +++ + H+K+ Sbjct: 149 LELAVTTGFPAERILLHGNAKSPQDLGTALRLGVGRIVIDTPAEIARIAAAVGSGGHQKV 208 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169 +R+ P +S + G +D ++ + G+ H + Sbjct: 209 MVRVTPGISAGGHRKIRTGSDDQKFGLSLRDGHAQHAIARVLDQPQLELTGIHCHLGSQI 268 Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221 + ++ + + + + LGGG + ++++ Sbjct: 269 TDVKPYLVAVRRLVGLMARVRDTHGVTLPELDLGGGHGIAHRPGEPALDLTTLARKVRAE 328 Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYL 273 + ++ +EPG A+ VL + + V VD + + L Sbjct: 329 LAESCAAAGLPVPRLVIEPGRAVTGPAGVAVYRVLAVKRTPGRTFVAVDGGMSDNPRPAL 388 Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 A GP V GR C AGDI E GD ++ Y++ Sbjct: 389 YGVRYAPRLIGRHSLAGPERVTVVGRHCEAGDILAEDVPLPADTHPGDLLAVPVAGAYHL 448 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + +R + D Sbjct: 449 SMASSYNLVGRPPVVAVRDGRARLLVRRETLEDLRAR 485 >gi|257886456|ref|ZP_05666109.1| diaminopimelate decarboxylase [Enterococcus faecium 1,141,733] gi|257822510|gb|EEV49442.1| diaminopimelate decarboxylase [Enterococcus faecium 1,141,733] Length = 419 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 62/394 (15%), Positives = 129/394 (32%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y+ D++K+ + + K+ K+L A K F M +++Y G S Sbjct: 19 KTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEMLRLVHEYGFGLDVVSG 78 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115 E+ + F + ++ K E + + ++ + + ++ ++ + Sbjct: 79 GEIYTALQADFPRDAIYFHGNNKTPEELSYAFENELLHVVADNLMEVELLEELSQRYSKK 138 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + LR+N V S+ G + ES + G H Sbjct: 139 VDVMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + A + + F + ++LGGG + + +Y+ Sbjct: 199 SQIFDVTAWLAEIDKLTSYLTDFDQPLS-LNLGGGFGIRYTQNDQPIPIEEALKKLIEYT 257 Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274 Q+ +EPG +IV T T+ I + D + ++ L Sbjct: 258 EESLDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317 Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 A + G+ C +GD+ + + K GD ++ Y + Sbjct: 318 QAAYDCDLAEKMSEEKTEKVTIAGKMCESGDVVIKETYLPKAKSGDLLAVYSTGAYGYSM 377 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + N + +R ++D Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLVVRRQVFSDLLR 411 >gi|229144119|ref|ZP_04272534.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST24] gi|228639338|gb|EEK95753.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST24] Length = 438 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGLALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + Q ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|301065233|ref|YP_003787256.1| diaminopimelate decarboxylase [Lactobacillus casei str. Zhang] gi|300437640|gb|ADK17406.1| Diaminopimelate decarboxylase [Lactobacillus casei str. Zhang] Length = 448 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 64/400 (16%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D + + + + A V + A K FA M++ S Sbjct: 26 QTPLYVYDVGAIRQQIRAFKRVFEEADVSYAVSYASKAFATIAMYEVAKSEGAHVDVVSG 85 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115 E+ F +++ K A+ + TII + +L+ D A Sbjct: 86 GELYTAQAADFPMAAVSFHGNNKSKAELTQALDAGVGTIIVDNFHELDLLDDLLGATVGQ 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + + +R+ P +S + S+ G E K + + N+ G+ H Sbjct: 146 QDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASGQADEAAKRILADDHLNLLGIHAHIG 205 Query: 167 CENKSFLCFSAMLKNIEK----EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F A+ + + F + +++GGG + Sbjct: 206 SQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVKAI 265 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + I++EPG +IV TV + + V VD + ++ Sbjct: 266 LATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L I + G+ C +GDI + GD + D Sbjct: 326 RPALYQATYTAILADQPNAAPAEHVHLVGKYCESGDILIDDAPLPTTTPGDVVVVFDTGA 385 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + + + D N Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDADLIKN 425 >gi|188588479|ref|YP_001922416.1| diaminopimelate decarboxylase [Clostridium botulinum E3 str. Alaska E43] gi|188498760|gb|ACD51896.1| diaminopimelate decarboxylase [Clostridium botulinum E3 str. Alaska E43] Length = 431 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 124/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + N + K ++ A K F M +N+ S Sbjct: 29 GTPLYVMDEGLIRQNCNDYYRYFKCNNSLNRVAYAGKAFLTLEMCKIINEENLSLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + ++ K + V + + +++ A Sbjct: 89 GELFTAYKSGFPLDKVMFHGNNKTLDEIELGVKLGVGRFVVDNYYEMDALNRIAASYNKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG-----EKCKDKIES----EIKNVNGLMFHNN 166 +KI LRI P + + S+ G +D I ++GL H Sbjct: 149 QKIFLRITPGIEAHTHEYIKTGQVDSKFGFAPVENMIEDAINKSIDLPNIELSGLHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212 + + ++ + I+ + LGGG Sbjct: 209 SQIFEIEPYEDAVEIMLGLIKKIQENTGYLIKELDLGGGFGIYYNRGDKPKTTKEYCEAI 268 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + + + +EPG +IV N+ T+ I + V + ++ Sbjct: 269 LNKVDEVCSRTGQSKPSLIIEPGRSIVGNSGITLYTIGSIKDIPGVRKYVSVDGGMSDNI 328 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + E + N T +CG+ C +GDI + D +S Sbjct: 329 RPALYHAEYECMLANKVEKDLKETVTICGKCCESGDILLNNVNISAPQSNDILSVMTTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + R +Y D N Sbjct: 389 YGYSMSNNYNKIPKPPVVMVKDNKERLICRRETYEDLIQN 428 >gi|229074708|ref|ZP_04207729.1| Diaminopimelate decarboxylase [Bacillus cereus Rock4-18] gi|229096010|ref|ZP_04226985.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-29] gi|229102122|ref|ZP_04232833.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-28] gi|229114964|ref|ZP_04244376.1| Diaminopimelate decarboxylase [Bacillus cereus Rock1-3] gi|228668476|gb|EEL23906.1| Diaminopimelate decarboxylase [Bacillus cereus Rock1-3] gi|228681322|gb|EEL35488.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-28] gi|228687395|gb|EEL41298.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-29] gi|228708451|gb|EEL60603.1| Diaminopimelate decarboxylase [Bacillus cereus Rock4-18] Length = 449 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEVLHDLAMQHGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIGLALQKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + K Q ++ +++GGG + Sbjct: 221 SQIFETAGFVRAIEVLRKFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + E V + ++ Sbjct: 281 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTIYTVGSVKEIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 341 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDINLPKVASSDLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440 >gi|86149204|ref|ZP_01067436.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597409|ref|ZP_01100644.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 84-25] gi|218561973|ref|YP_002343752.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|13124081|sp|Q9PII5|DCDA_CAMJE RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|85840562|gb|EAQ57819.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190470|gb|EAQ94444.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 84-25] gi|112359679|emb|CAL34465.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925586|gb|ADC27938.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni IA3902] gi|315928385|gb|EFV07699.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930531|gb|EFV09574.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 305] Length = 402 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 58/383 (15%), Positives = 124/383 (32%), Gaps = 22/383 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ + + K ++ A+K + + L G S+ EV Sbjct: 12 TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71 Query: 64 MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ K + A+ + I + +++ + A++L+ K + Sbjct: 72 KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131 Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168 R+NP+V ++ G + S G+ FH + Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEK 224 +A++ + +E +++ +GGG+ + + D+ Q + Sbjct: 192 ISPIHEAAAIVAKLVRELKALQIDLKFFDIGGGLGVAYEKNECEPDLYDYAQGILAQLHG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I +EPG +V + +VL K V+VD ++ + L I P Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311 Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C +GD F + + D + ++ Y + + +N N Sbjct: 312 YNQGEESLCDVVGGICESGDFFAKARSLPSTQSDDIMVIKNTGAYGFSMSSNYNTRNKVC 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + ++ D Sbjct: 372 ELALEEGQVRLIRQRENFEDQIA 394 >gi|239630911|ref|ZP_04673942.1| diaminopimelate decarboxylase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527194|gb|EEQ66195.1| diaminopimelate decarboxylase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 448 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 64/400 (16%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D + + + + A V + A K FA M++ S Sbjct: 26 QTPLYVYDVGAIRQQIRAFKRVFEEADVSYAVSYASKAFATIAMYEVAKSEGAHVDVVSG 85 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115 E+ F +++ K A+ + TII + +L+ D A Sbjct: 86 GELYTAQAADFPMAAVSFHGNNKSKAELTQALDAGVGTIIVDNFHELDLLDDLLGATVGQ 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + + +R+ P +S + S+ G E K + + N+ G+ H Sbjct: 146 QDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASGQSDEAAKRILADDHLNLLGIHAHIG 205 Query: 167 CENKSFLCFSAMLKNIEK----EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F A+ + + F + +++GGG + Sbjct: 206 SQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVKAI 265 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + I++EPG +IV TV + + V VD + ++ Sbjct: 266 LATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L I + G+ C +GDI + GD + D Sbjct: 326 RPALYQATYTAILADQPNAAPAEHVHLVGKYCESGDILIDDAPLPTTTPGDVVVVFDTGA 385 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + + + D N Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDADLIKN 425 >gi|208433995|ref|YP_002265661.1| carboxynorspermidine decarboxylase [Helicobacter pylori G27] gi|208431924|gb|ACI26795.1| carboxynorspermidine decarboxylase [Helicobacter pylori G27] Length = 405 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 136/400 (34%), Positives = 208/400 (52%), Gaps = 38/400 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N + + +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQRLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162 +L K+GLRINP S + +P SRLG + ++ V+GL Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE L+++E+ F ++ + W++ GGG H T DY V Q +K+F Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITKSDYDVNLLIQTIKDFK 245 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E+Y ++ LEPGEAI L +V+DI +N + + I+D+S AH+PD L +I Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305 Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 N G ++ + G +CLAGD G F FE P+K GD+I F+D+ Sbjct: 306 LKVSVENDKELIEVERGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I + N FNG+ +P++A + G K ++ FSY DY N Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404 >gi|298208274|ref|YP_003716453.1| diaminopimelate decarboxylase [Croceibacter atlanticus HTCC2559] gi|83848195|gb|EAP86065.1| diaminopimelate decarboxylase [Croceibacter atlanticus HTCC2559] Length = 406 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 63/385 (16%), Positives = 122/385 (31%), Gaps = 27/385 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ + + + + K V++ A+K + + + + G + S+ Sbjct: 14 GSPVYVYNAETIESQYKRLTSAFKKVKQVRINYAVKALSNLAILQLMKRMGAGLDTVSIQ 73 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG + Y E ++ I + +S L +F K + Sbjct: 74 EVKLGLAAGVDPKKIIYTPNGVSMEEIEEVAALGVQINIDNLSVLEQFGTK--HPKIPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173 +RINP V S+ G N+NG+ H + Sbjct: 132 IRINPHVMAGGNTNISVGHIDSKFGISIHQIPHILRIVELTRMNINGVHMHTGSDILDID 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKEFSEKY 225 F + I + +E+I G G K+ ++ + R KEF ++Y Sbjct: 192 VFLYASE-ILFDTAKNFKDLEFIDFGSGFKVPYKEGDIETNIEEFGDKLSTRFKEFCKEY 250 Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY 282 + L EPG+ +V+ V + + +DS + L + + Sbjct: 251 GKDLTLAFEPGKFLVSEAGKFLAKVNVVKQTTSTVFAQIDSGFNHLIRPMLYGSQHEIMN 310 Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + V G C D F +K D ++F + Y + + +N Sbjct: 311 ISNPNGRQRFYSVVGYICET-DTFANNRRINEIKENDILAFSNAGAYCFSMASNYNSRFR 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P + +++D Sbjct: 370 PPEVLWYQGKAHLIRERETFDDLLK 394 >gi|186686026|ref|YP_001869222.1| diaminopimelate decarboxylase [Nostoc punctiforme PCC 73102] gi|186468478|gb|ACC84279.1| diaminopimelate decarboxylase [Nostoc punctiforme PCC 73102] Length = 465 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 119/398 (29%), Gaps = 33/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D++ L + K ++L A K + + G S Sbjct: 61 GSPLYILDEETLRSACQQYRDAFKQYYKGESQVLYASKAWNCLAVCAIAASEGLGIDVVS 120 Query: 60 LYEVMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-LHK 116 E+ E + E+ + + TI+ + +L + AQ Sbjct: 121 GGELYTALQAGVSPEKIYLHGNNKSREELILAIESGVTIVADNWYELRTLVEIAQPGQSI 180 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169 +I LR+ P + S+ G D + + G+ H + Sbjct: 181 RIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLDEVFTFVSQQSTLDCVGVHAHIGSQI 240 Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKY 225 + + + + I +++GGG+ + + +K E Sbjct: 241 FERQPHQDLAAVMVQWLRDAGKYGLNITELNVGGGLGIKYTESDDPPSIEEWVKAICEVV 300 Query: 226 SVQIYLE----------PGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL 273 +E PG +++ TV + I+ V +D + + Sbjct: 301 QEACAVENLPLPKLLSEPGRSLIATACVTAYTVGSSKVIPEIRTYVAIDGGMSDNPRPIT 360 Query: 274 LYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + N T + G+ C +GDI + + GD + YN + Sbjct: 361 YQSVYRAVVANKMSSPVTQTVTIAGKHCESGDILIKNALLPKTEPGDILVVMGTGAYNYS 420 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + +N + P V ++ +Y D S Sbjct: 421 MASNYNRLPRPAAVVVANGEANLILQRETYQDLIRQDS 458 >gi|229043260|ref|ZP_04190982.1| Diaminopimelate decarboxylase [Bacillus cereus AH676] gi|228726121|gb|EEL77356.1| Diaminopimelate decarboxylase [Bacillus cereus AH676] Length = 438 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGLALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + Q ++ +++GGG + Sbjct: 210 SQIFETAGFVLAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|73669151|ref|YP_305166.1| diaminopimelate decarboxylase [Methanosarcina barkeri str. Fusaro] gi|72396313|gb|AAZ70586.1| diaminopimelate decarboxylase [Methanosarcina barkeri str. Fusaro] Length = 420 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 125/393 (31%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ +L N + + + G K A+K + L + G SSL Sbjct: 21 PTPFHIYDEKAILENAEKMKAVFREVPGFKEFFAVKALPNPFILKILREKGFGADCSSLP 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L GE ++ E I + +S ++ + A Sbjct: 81 ELILAEKAGITGEDIMFSSNDTPAEEFLKAKELGAYINLDDISHIDYLEKYAGLPDIVC- 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENK----- 170 + ++ G E + V H + Sbjct: 140 -FRYNPGPLKEGNAIIGRPEEAKYGFTRDQLFEGYRILRDRGVKRFGMHTMVASNELKAD 198 Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224 + + I + + E+++LGGGI + + + + ++ Sbjct: 199 YFVETARILFELIVEISKELNIKFEFVNLGGGIGIPYRPEEEPVSFEAVAKGVKEAYEAT 258 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 Y ++++LE G I L T V + K+ V +DS + + + Sbjct: 259 ITASGLYPLKVFLECGRVITGPYGYLITQVRHLKHTYKDYVGMDSCMANLMRPGIYGAYH 318 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F ++IGD ++ D + + + Sbjct: 319 HITVLGKENEAPVHKYDVTGSLCENNDKFAIDRHLPEIEIGDILAIHDTGAHGHSMGFNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG++ IR + DY+ L Sbjct: 379 NGKLRSAELLLRKDGSVVQIRRAETIEDYFATL 411 >gi|229108976|ref|ZP_04238577.1| Diaminopimelate decarboxylase [Bacillus cereus Rock1-15] gi|296502092|ref|YP_003663792.1| diaminopimelate decarboxylase [Bacillus thuringiensis BMB171] gi|228674445|gb|EEL29688.1| Diaminopimelate decarboxylase [Bacillus cereus Rock1-15] gi|296323144|gb|ADH06072.1| diaminopimelate decarboxylase [Bacillus thuringiensis BMB171] Length = 438 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + Q ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|332312393|gb|EGJ25488.1| Diaminopimelate decarboxylase [Listeria monocytogenes str. Scott A] Length = 436 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 56/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 92 GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 VSVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F + I + + + ++LGGG + + +++ Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271 Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 ++ +I++EPG ++V T V E + + + Sbjct: 272 IMDEVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 435 >gi|300087798|ref|YP_003758320.1| diaminopimelate decarboxylase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527531|gb|ADJ25999.1| diaminopimelate decarboxylase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 437 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 128/398 (32%), Gaps = 36/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y+ +Q + + K ++ +K+L A K + + + + G S Sbjct: 35 GTPLYIFSEQDFRDRCREYNRVFKADFSSDLKVLFAGKAWLNLSILKIIAEEGIGLDVVS 94 Query: 60 LYEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ + F + + K V I+ + S +++ + A + Sbjct: 95 EGELGIASAAGFPLDRIYMHGNNKSDRELELAVEKGIGRIVVDNQSDISRLEAIASEKKD 154 Query: 117 KIGLRI--NPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNC 167 + + + NP + S+ G ++ I+S++ ++ G +H Sbjct: 155 RPAILVRINPGIDPHTHAKISTGNIDSKFGMGLEEARDVIDHIIKSDVLDLKGFHYHIGS 214 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKD----FCQRLK 219 + F L +T +++ + +GGG + + + Sbjct: 215 QIFEIQPFLDALTTALAFISDLMTDLDYATRELDIGGGYAIPYLSEQNPPGIGEYAKAIS 274 Query: 220 EFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVP 270 + + + +EPG +++ ++T TV I ++ V VD + ++ Sbjct: 275 DHFDSECQRLKLQKPCVTIEPGRSLIASSTVALYTVGVIKRISGIRDYVCVDGGMADNIR 334 Query: 271 DYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + N V GR C +GDI K GD + Y Sbjct: 335 PTLYGAQYEPSLANRMNDSNVGKYTVAGRYCESGDILATDVSLPEPKTGDLLVMPGAGAY 394 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + + R + D Sbjct: 395 CLPMASNYNASFRPAVVKVHQGKATLIRRRETMEDLIR 432 >gi|328466300|gb|EGF37457.1| diaminopimelate decarboxylase [Listeria monocytogenes 1816] Length = 436 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 56/404 (13%), Positives = 127/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 92 GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F + I + + + ++LGGG + + +++ Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271 Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 ++ +I++EPG ++V T V E + + + Sbjct: 272 IMDEVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P++ + +Y + N LS Sbjct: 392 AYGYAMASNYNRIPRPSVVFVENGVDKLIVARETYENLVQNDLS 435 >gi|315282993|ref|ZP_07871276.1| diaminopimelate decarboxylase [Listeria marthii FSL S4-120] gi|313613364|gb|EFR87225.1| diaminopimelate decarboxylase [Listeria marthii FSL S4-120] Length = 436 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 58/404 (14%), Positives = 128/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 92 GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211 Query: 166 NCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F ++ + + G + ++LGGG + + +++ Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHGTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271 Query: 221 FSEKYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAH 268 ++ +I++EPG ++V T V E VD + + Sbjct: 272 IMDEVRDVADSNDIAIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYLAVDGGMSDN 331 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGIDKLVVARETYENLVQNDLS 435 >gi|46908186|ref|YP_014575.1| diaminopimelate decarboxylase [Listeria monocytogenes serotype 4b str. F2365] gi|226224557|ref|YP_002758664.1| diaminopimelate decarboxylase [Listeria monocytogenes Clip81459] gi|254825552|ref|ZP_05230553.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-194] gi|254852854|ref|ZP_05242202.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL R2-503] gi|254931876|ref|ZP_05265235.1| diaminopimelate decarboxylase [Listeria monocytogenes HPB2262] gi|255520093|ref|ZP_05387330.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-175] gi|300763736|ref|ZP_07073733.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL N1-017] gi|46881456|gb|AAT04752.1| diaminopimelate decarboxylase [Listeria monocytogenes serotype 4b str. F2365] gi|225877019|emb|CAS05728.1| Putative diaminopimelate decarboxylase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606187|gb|EEW18795.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL R2-503] gi|293583427|gb|EFF95459.1| diaminopimelate decarboxylase [Listeria monocytogenes HPB2262] gi|293594793|gb|EFG02554.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-194] gi|300515472|gb|EFK42522.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL N1-017] gi|328472794|gb|EGF43643.1| diaminopimelate decarboxylase [Listeria monocytogenes 220] Length = 436 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 56/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 92 GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F + I + + + ++LGGG + + +++ Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271 Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 ++ +I++EPG ++V T V E + + + Sbjct: 272 IMDEVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 435 >gi|254827163|ref|ZP_05231850.1| lysA [Listeria monocytogenes FSL N3-165] gi|254831447|ref|ZP_05236102.1| hypothetical protein Lmon1_08838 [Listeria monocytogenes 10403S] gi|254899351|ref|ZP_05259275.1| hypothetical protein LmonJ_06044 [Listeria monocytogenes J0161] gi|254912510|ref|ZP_05262522.1| diaminopimelate decarboxylase [Listeria monocytogenes J2818] gi|254936837|ref|ZP_05268534.1| lysA [Listeria monocytogenes F6900] gi|255026088|ref|ZP_05298074.1| hypothetical protein LmonocytFSL_06525 [Listeria monocytogenes FSL J2-003] gi|284802397|ref|YP_003414262.1| diaminopimelate decarboxylase [Listeria monocytogenes 08-5578] gi|284995539|ref|YP_003417307.1| diaminopimelate decarboxylase [Listeria monocytogenes 08-5923] gi|258599545|gb|EEW12870.1| lysA [Listeria monocytogenes FSL N3-165] gi|258609433|gb|EEW22041.1| lysA [Listeria monocytogenes F6900] gi|284057959|gb|ADB68900.1| diaminopimelate decarboxylase [Listeria monocytogenes 08-5578] gi|284061006|gb|ADB71945.1| diaminopimelate decarboxylase [Listeria monocytogenes 08-5923] gi|293590495|gb|EFF98829.1| diaminopimelate decarboxylase [Listeria monocytogenes J2818] Length = 436 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 56/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 92 GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F + I + + + ++LGGG + + +++ Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271 Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 ++ +I++EPG ++V T V E + + + Sbjct: 272 IMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 435 >gi|302337975|ref|YP_003803181.1| Orn/DAP/Arg decarboxylase 2 [Spirochaeta smaragdinae DSM 11293] gi|301635160|gb|ADK80587.1| Orn/DAP/Arg decarboxylase 2 [Spirochaeta smaragdinae DSM 11293] Length = 420 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 66/394 (16%), Positives = 124/394 (31%), Gaps = 31/394 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP++L D+ +L N G K A+K + D L++ GT SSL Sbjct: 20 LPTPFHLYDEAAILENARYIKKAFAWAPGFKNYFAVKACPNPTILDLLHKEGFGTDCSSL 79 Query: 61 YEVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E++L GE + E I + +S ++ + A Sbjct: 80 PELILSEKSGIAGEEVMFTSNDTPAEEFKEAKRLGAIINLDDISHIDFLEKAAGIPELIC 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172 + ++ G +++ GL + Sbjct: 140 --FRYNPGDARSGNVIIGEPKEAKYGITRDQILDAYRMAKEKGAKRFGLHTMVASNELNP 197 Query: 173 LCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224 F + + K ++E+++LGGGI + + + +K + +K Sbjct: 198 EYFIETGRMLFELAVKIKEELGIKLEFVNLGGGIGIPYRLDQEPVDLVRVSEGIKGWYDK 257 Query: 225 YSVQ-------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 V I +E G + L T V I++ K V +D+S+ + + Sbjct: 258 MIVPAGLDPLKIVMECGRVVTGPYGYLITRVRHIAKKYKTYVGLDASMANLMRPAIYGAY 317 Query: 278 SATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 V G C D F +++GD I+ D + Sbjct: 318 HHITVLGKENEPPAMVCDVTGSLCENNDKFAIDRNLPEIEVGDLIAIHDAGAHGYAMGFN 377 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +NG + T++ IR + +D + L Sbjct: 378 YNGKLRSAEVLIKDPETVELIRRAETMDDLFATL 411 >gi|333024412|ref|ZP_08452476.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071] gi|332744264|gb|EGJ74705.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071] Length = 465 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 113/398 (28%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D++ G + A K F + + L++ S E Sbjct: 65 GTPAYFLDEEDFRTRCRDWRSAFGE-GADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 123 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 ++ A++ K I+ ++ +L + AQ L + Sbjct: 124 LLTALDAGMPAARIAFHGNNKTAAEIERAVAAGVGRIVVDSFQELVRVAHTAQALGRVQR 183 Query: 120 --LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 +R+ V + G E + + + + G+ H + Sbjct: 184 VQIRVTVGVEAHTHEFIATAHEDQKFGLALAGGQAAEAVRRALTLDGIELVGIHSHIGSQ 243 Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F + + ++ I LGGG+ + + Sbjct: 244 IFDMAGFEVSARRVVGLLAEIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALGD 303 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG AIV T V I + V VD + ++ Sbjct: 304 IVTRECESAGLAVPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 363 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E A+ + P V G+ C +GDI F + GD ++ Y Sbjct: 364 ALYDAEYSVALASRTSDAAPMLVRVVGKHCESGDIVVRDAFLPADLAPGDLLAVPATGAY 423 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D Sbjct: 424 CRSMASNYNHALRPPVVAVRDGQARVVVRRETEEDLLR 461 >gi|315646372|ref|ZP_07899490.1| diaminopimelate decarboxylase [Paenibacillus vortex V453] gi|315278015|gb|EFU41335.1| diaminopimelate decarboxylase [Paenibacillus vortex V453] Length = 443 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 66/400 (16%), Positives = 134/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+Q + N + +G ++ A K F M ++ S Sbjct: 30 GTPLYIVDEQSVRNRCREYIEAFNASGLKFQVAYASKAFCVMAMCRLADEEGMSLDVVSD 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F E ++ K E + ++ + + V +L+ + A + ++ Sbjct: 90 GELYTALQAGFPAERIHFHGNNKTPEEIEMALDAHIGCFVVDNVIELHMLQAIAAEKNRT 149 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I LR+ P V + S+ G E K N+ G+ H Sbjct: 150 VNILLRVTPGVEAHTHEYISTGQTDSKFGFDIGNGSAYEAVKLAEAQGNINLMGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + F ++ + + + ++LGGG D + + + Sbjct: 210 SQIFEVEGFQMAVQRVAEFASSVKEGLGVVFKVVNLGGGFGIRYVDGDTPLQVSQYVKAI 269 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + +I++EPG +IV + T TV + V + + Sbjct: 270 TDAVKTHFAGLGSELPEIWVEPGRSIVGDAGTTLYTVGTSKDIPGVRKYVAVDGGMTDNP 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + T + G+ C +GD+ V+ GD ++ Sbjct: 330 RPALYESKYEAVLANRANDKVEETVSIAGKCCESGDMLIWDLDLPKVETGDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P + + +R S D +N Sbjct: 390 YNYSMASNYNRIRKPAVVFVKDGQSNLVVRRESLADIISN 429 >gi|260893164|ref|YP_003239261.1| diaminopimelate decarboxylase [Ammonifex degensii KC4] gi|260865305|gb|ACX52411.1| diaminopimelate decarboxylase [Ammonifex degensii KC4] Length = 435 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 63/397 (15%), Positives = 118/397 (29%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D++ N L G + A K + + S E Sbjct: 30 GTPLYVLDEEVFRANCRRYLCSL-GPGNRAAYAGKALLTLAICRICQEEGLYLDVVSAGE 88 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118 + F E ++ K + + + + +L +++A+ L KK Sbjct: 89 LYTAVKAGFPPERLYFHGNNKSLQEIEMGLELGVGRFVVDNFYELELLEERARALGKKPA 148 Query: 119 -GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 LR+ P + + S+ G E + + S + GL H + Sbjct: 149 ILLRLTPGIEAHTHEYIRTGQLDSKFGFPLATGVAEEAVRRALSSPHLELVGLHCHIGSQ 208 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------- 216 F M+ +E + LGGG+ + Sbjct: 209 ILRLEPFQEAARVMVAFAASIRRKTGWVMEELDLGGGLGIRYTAEDDPPAIEDYVQAILR 268 Query: 217 RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 ++E ++ +I +EPG +IV TV I E V + + Sbjct: 269 AVEEACQEEGLPLPRIVVEPGRSIVGPAGITLYTVGAIKEIPGVRTYVAVDGGMADNPRP 328 Query: 272 YLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + N V G+ C +GDI + GD ++ YN Sbjct: 329 ALYQARYEAVLANRMLEPPAVEVAVAGKCCESGDILIPAIKLPRPQPGDILAVFATGAYN 388 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + P + + + + D + Sbjct: 389 YSMSMNYNRLPRPAMVLVRGGEVDLIVARETLEDLIS 425 >gi|301301010|ref|ZP_07207171.1| diaminopimelate decarboxylase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851367|gb|EFK79090.1| diaminopimelate decarboxylase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 430 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 130/400 (32%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D K+ + + VK + A K F++ M+D + + G+ S Sbjct: 28 GTPTIVYDVAKIKEQIAKFKAGFEEENVKYHISYASKAFSSLAMYDLVAKSGIGSDVVSG 87 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ + + ++ K + SN II + +++ + + +K Sbjct: 88 GELYAALKGGMDPQELEFHGNNKSRAELEMAVDSNVGYIIVDNFYEIDLLNEVLTEKNKT 147 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I LR+ P + + S+ G E + + + V G+ H Sbjct: 148 ADILLRLAPGIHAETHEYISTGQAKSKFGFDLQSGQASEALEKTLANPRFKVLGVHSHIG 207 Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + ++ + + E ++LGGG D Sbjct: 208 SQIFATAGFVEAAKKLMDFLSAWKEKYDFTAEVLNLGGGFGIRYTDQDEPLDVKDFVKII 267 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +KE S++ + + ++EPG ++V TV + V + ++ Sbjct: 268 VEAVKEKSKELNYPMPAIWIEPGRSVVGEAGVSLYTVGSRKDVEGVGSFVAVDGGMGDNI 327 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + A + G+ C +GDI + + + GD I+ Sbjct: 328 RPALYGAEYDAVLAKDPNAPIAQNASIVGKYCESGDILIKDYDFPKTEPGDVIAMLSTGA 387 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +N P I ++ SY D N Sbjct: 388 YGYVMASNYNRNPRPAIVFVEDGKARLVVKRESYEDMIRN 427 >gi|90961979|ref|YP_535895.1| diaminopimelate decarboxylase [Lactobacillus salivarius UCC118] gi|90821173|gb|ABD99812.1| Diaminopimelate decarboxylase [Lactobacillus salivarius UCC118] Length = 430 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 130/400 (32%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D K+ + + VK + A K F++ M+D + + G+ S Sbjct: 28 GTPTIVYDVAKIKEQIAKFKAGFEEENVKYHISYASKAFSSLAMYDLVAKSGIGSDVVSG 87 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ + + ++ K + SN II + +++ + + +K Sbjct: 88 GELYAALKGGMDPQELEFHGNNKSRAELEMAVDSNVGYIIVDNFYEIDLLNEVLTEKNKT 147 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I LR+ P + + S+ G E + + + V G+ H Sbjct: 148 ADILLRLAPGIHAETHEYISTGQAKSKFGFDLQSGQASEALEKTLANPRFKVLGVHSHIG 207 Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + ++ + + E ++LGGG D Sbjct: 208 SQIFATAGFVEAAKKLMDFLSAWKEKYDFTAEVLNLGGGFGIRYTDQDEPLDVKDFVKII 267 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +KE S++ + + ++EPG ++V TV + V + ++ Sbjct: 268 VEAVKEKSKELNYPMPAIWIEPGRSVVGEAGVSLYTVGSRKDVEGVGSFVAVDGGMGDNI 327 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + A + G+ C +GDI + + + GD I+ Sbjct: 328 RPALYGAEYDAVLAKDPNAPIAQNASIVGKYCESGDILIKDYDFPKTEPGDVIAMLSTGA 387 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +N P I ++ SY D N Sbjct: 388 YGYVMASNYNRNPRPAIVFVEDGKARLVVKRESYEDMIRN 427 >gi|16803991|ref|NP_465476.1| hypothetical protein lmo1952 [Listeria monocytogenes EGD-e] gi|224498598|ref|ZP_03666947.1| hypothetical protein LmonF1_02429 [Listeria monocytogenes Finland 1988] gi|224501248|ref|ZP_03669555.1| hypothetical protein LmonFR_01785 [Listeria monocytogenes FSL R2-561] gi|16411405|emb|CAD00030.1| lysA [Listeria monocytogenes EGD-e] Length = 436 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 56/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 92 GELFTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F + I + + + ++LGGG + + +++ Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271 Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 ++ +I++EPG ++V T V E + + + Sbjct: 272 IMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 435 >gi|228907150|ref|ZP_04071012.1| Diaminopimelate decarboxylase [Bacillus thuringiensis IBL 200] gi|228852482|gb|EEM97274.1| Diaminopimelate decarboxylase [Bacillus thuringiensis IBL 200] Length = 438 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 123/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + + F ++ + + Q ++ +++GGG + Sbjct: 210 SQIFETVGFVRAIEVLRQFLEKVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|227552372|ref|ZP_03982421.1| diaminopimelate decarboxylase [Enterococcus faecium TX1330] gi|257895054|ref|ZP_05674707.1| diaminopimelate decarboxylase [Enterococcus faecium Com12] gi|293377961|ref|ZP_06624142.1| diaminopimelate decarboxylase [Enterococcus faecium PC4.1] gi|227178493|gb|EEI59465.1| diaminopimelate decarboxylase [Enterococcus faecium TX1330] gi|257831619|gb|EEV58040.1| diaminopimelate decarboxylase [Enterococcus faecium Com12] gi|292643508|gb|EFF61637.1| diaminopimelate decarboxylase [Enterococcus faecium PC4.1] Length = 419 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 62/394 (15%), Positives = 129/394 (32%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y+ D++K+ + + K+ K+L A K F M +++Y G S Sbjct: 19 KTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEMLRLVHEYGFGLDVVSG 78 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115 E+ + F + ++ K E + + ++ + + ++ ++ + Sbjct: 79 GEIYTALQADFPRDAIYFHGNNKTPEELSYALENELLHVVADNLMEVELLEELSQRYSKK 138 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + LR+N V S+ G + ES + G H Sbjct: 139 VDVMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + A + + F + ++LGGG + + +Y+ Sbjct: 199 SQIFDVTAWLAEIDKLTSYLIDFDQPLS-LNLGGGFGIRYTQNDQPIPIEEALKKLIEYT 257 Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274 Q+ +EPG +IV T T+ I + D + ++ L Sbjct: 258 EESLDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317 Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 A + G+ C +GD+ + + K GD ++ Y + Sbjct: 318 QAAYDCDLAEKLSEEKTEKVTIAGKMCESGDVVIKETYLPKAKSGDLLAVYSTGAYGYSM 377 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + N + +R ++D Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLVVRRQVFSDLLR 411 >gi|313607903|gb|EFR84055.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL F2-208] Length = 436 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 56/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 92 GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F + I + + + ++LGGG + + +++ Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPGEYVRQ 271 Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 ++ +I++EPG ++V T V E + + + Sbjct: 272 IMDEVRDVANSNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 435 >gi|288918854|ref|ZP_06413198.1| diaminopimelate decarboxylase [Frankia sp. EUN1f] gi|288349706|gb|EFC83939.1| diaminopimelate decarboxylase [Frankia sp. EUN1f] Length = 439 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 53/401 (13%), Positives = 108/401 (26%), Gaps = 39/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L+++ ++ + + K + + L G + S E Sbjct: 26 GTPTYVYSASTLVDHYVRFAKAFESIDPLICFSAKALSNVHLLRILGDQGAGIDTVSGGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E K D +AV + I + ++ A++ + Sbjct: 86 LHRALLAGVDPERIVLAGVGKSADELREAVRRDIRCINVESEEEVALLARIAREEGGRPR 145 Query: 120 LRINPSVSY----SKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCE 168 L I + + G + G+ H Sbjct: 146 LAIRVNPDIAPDLRTPARTTTAVRGVKFGVDIERAAALFSRAAGDGFLRPEGIHVHIGSP 205 Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFS 222 ++ ++ + + + I+LGGG +F + Sbjct: 206 IFDPQVYAMAIERVLALVADIEAAGNPVTTINLGGGFPAEYTEGSAPGWDEFADAICPRL 265 Query: 223 EKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 E + QI EPG I N L V + + ++V + H+ +Y Sbjct: 266 EGFVHRGGQIIFEPGRTIAANAGVLLAAVRYRKQAGERELVVIDAGMTHIARAAMYDSYH 325 Query: 280 TIYPN----------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 ++P V G C + D + + GD ++ Sbjct: 326 FMWPVSPVNGAIPRSRDQKSVDDLVAYDVVGPICESSDYLAKGRALPAMVAGDLVAIFTA 385 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + R +Y+D Sbjct: 386 GAYGMTMTSNYNSQLRPAEVLVRGAEAKLVRRRETYDDLVA 426 >gi|30019568|ref|NP_831199.1| diaminopimelate decarboxylase [Bacillus cereus ATCC 14579] gi|229126834|ref|ZP_04255846.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-Cer4] gi|29895112|gb|AAP08400.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 14579] gi|228656774|gb|EEL12600.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-Cer4] Length = 438 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEGSIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGLALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + Q ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|290892112|ref|ZP_06555108.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J2-071] gi|290558235|gb|EFD91753.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J2-071] Length = 436 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 56/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 92 GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F + I + + + ++LGGG + + +++ Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPGEYVRQ 271 Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 ++ +I++EPG ++V T V E + + + Sbjct: 272 IMDEVRDVANSNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGIDKLIVARETYENLVQNDLS 435 >gi|16801132|ref|NP_471400.1| hypothetical protein lin2066 [Listeria innocua Clip11262] gi|16414567|emb|CAC97296.1| lysA [Listeria innocua Clip11262] gi|313618118|gb|EFR90219.1| diaminopimelate decarboxylase [Listeria innocua FSL S4-378] Length = 436 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 56/404 (13%), Positives = 127/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 92 GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 AAVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211 Query: 166 NCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F ++ + + G + ++LGGG + + +++ Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHGTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271 Query: 221 FSEKYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 ++ +I++EPG ++V T V E + + + Sbjct: 272 IMDEVRDVANSNDIAIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSDAGEILAVFCTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGMDKLIVARETYENLVQNDLS 435 >gi|228984597|ref|ZP_04144772.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775124|gb|EEM23515.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 449 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + F ++ K E A+ +N + + +L D A Sbjct: 101 GELYTALQSGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 221 SQIFETAGFVRAIEVLRQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 281 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 341 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440 >gi|260062189|ref|YP_003195269.1| diaminopimelate decarboxylase [Robiginitalea biformata HTCC2501] gi|88783751|gb|EAR14922.1| diaminopimelate decarboxylase [Robiginitalea biformata HTCC2501] Length = 420 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 65/384 (16%), Positives = 111/384 (28%), Gaps = 27/384 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 P Y+ D K+ + + + +KL A K + + LN G + S+ EV Sbjct: 16 PVYVYDAGKIQSQFKRLTHAFRVVPKLKLNYAAKALSNLSILRLLNNLGSGLDTVSIQEV 75 Query: 64 MLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 LG + E Y EI+ S I + +S L +F K + +R Sbjct: 76 QLGLLAGYRPEDIIYTPNGVSLEEIEEAASLGVQINIDNLSILEQFGSK--HPDIPVCIR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175 INP V S+ G +NG+ H + F Sbjct: 134 INPHVMAGGNSKISVGHIDSKFGISIHQIPHLLRIVELTKMKINGIHMHTGSDILDIDVF 193 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + I + +E+I G G K+ ++ + L E + G Sbjct: 194 LYASE-ILFDTAMHFKDLEFIDFGSGFKVPYKEGDIETNVEELGEKLGGRFREFCDAYGR 252 Query: 236 ----------AIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPN 284 +V+ V + + VDS + L + Sbjct: 253 ELTLAFEPGKFLVSEAGYFLARVNVVKQTTSTVFAGVDSGFNHLIRPMLYGANHHIENLS 312 Query: 285 T---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C D F + + GD + F + Y + +N P Sbjct: 313 NPGGKERYYSVVGYICET-DTFASNRRIREISEGDILCFRNAGAYCFTMASNYNSRFRPA 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365 + + ++ D N Sbjct: 372 EVLWMDGKAHLIRKRENFEDLIRN 395 >gi|217963896|ref|YP_002349574.1| diaminopimelate decarboxylase [Listeria monocytogenes HCC23] gi|217333166|gb|ACK38960.1| diaminopimelate decarboxylase [Listeria monocytogenes HCC23] gi|307571534|emb|CAR84713.1| lysA [Listeria monocytogenes L99] Length = 436 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 55/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ ++ + ++K Sbjct: 92 GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEEILIERNEK 151 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F + I + + + ++LGGG + + +++ Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPGEYVRQ 271 Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 ++ +I++EPG ++V T V E + + + Sbjct: 272 IMDEVRDVANSNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGIDKLIVARETYENLVQNDLS 435 >gi|302381729|ref|YP_003817552.1| diaminopimelate decarboxylase [Brevundimonas subvibrioides ATCC 15264] gi|302192357|gb|ADK99928.1| diaminopimelate decarboxylase [Brevundimonas subvibrioides ATCC 15264] Length = 424 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 56/393 (14%), Positives = 113/393 (28%), Gaps = 29/393 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYI-----RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 + TP Y+ L + + A+K + + TL + G Sbjct: 25 VGTPAYVYSTATLSRHYGVLREAVDAHPAAFGDALIAFAVKANSNLSVLATLARLGSGAD 84 Query: 57 SSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA-- 111 + S E+ ++ K A I + ++L++ A Sbjct: 85 TVSEGEIRRALKAGIPAARIIFSGVGKTDAELAYALDVGVRQINVESPAELDRLIAVAAE 144 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFH 164 + I +R+NP + + G + + S GL H Sbjct: 145 KGACPDIAIRVNPKIGAGGHAKITTGGEGDKFGIPADEALALYARAAASPHVTPVGLACH 204 Query: 165 NNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD----KDYPVKDFCQR 217 + A + + + + + LGGG+ + V D+ Sbjct: 205 IGSQIIDLTPLEAAFRLLREMTLTLRGQGLSVTRLDLGGGLGVPYSGGAETASVADYAAM 264 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLY 275 E V+ EPG + N L V+ I+E + +++D+++ V + Sbjct: 265 AAGVLEGLEVEAAFEPGRLLAANAGVLLARVIQITERADGRRFLVLDAAMNDLVRPAMYD 324 Query: 276 QESATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G C GD F P++ GD + F Y + Sbjct: 325 AFHEVKPVTPRDGDLIAYDIVGPVCETGDTFARGRDLPPLQAGDLVVFTGAGAYGAVMSS 384 Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 +N + + + +Y++ Sbjct: 385 EYNSRPLVPEVLVDEARWAVVRGRPTYDEMLTR 417 >gi|218232998|ref|YP_002366201.1| diaminopimelate decarboxylase [Bacillus cereus B4264] gi|218160955|gb|ACK60947.1| diaminopimelate decarboxylase [Bacillus cereus B4264] Length = 438 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQIAYASKAFLCMEMCRVAREESMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + Q ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|302542535|ref|ZP_07294877.1| diaminopimelate decarboxylase [Streptomyces hygroscopicus ATCC 53653] gi|302460153|gb|EFL23246.1| diaminopimelate decarboxylase [Streptomyces himastatinicus ATCC 53653] Length = 463 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 119/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D+ + A K F + + L++ S E Sbjct: 63 GTPAYFLDEDDFRARCRAWREAFGE-DADVFYAGKAFLSRAVVRWLHEEGLNLDVCSEGE 121 Query: 63 VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 ++ E A + K + AV + I+ ++ ++ + AQ L K+ Sbjct: 122 LVTALAAGIPAERIALHGNNKSAKEIHRAVEAGVGRIVLDSFQEIVRVAHIAQGLGKRQK 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 +R+ V + G + ++ + + G+ H + Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALKLDGLELIGVHSHIGSQ 241 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +++ ++ I LGGG+ + + + Sbjct: 242 IFDTSGFEVAAHRVVGLLKEVRDEHGVELPEIDLGGGLGIAYTPDDDPSEPHDIAKALRE 301 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG AIV T V + E + V VD + ++ Sbjct: 302 IVTRECAGAGLSVPRLSVEPGRAIVGPTAFTLYEVGTVKELPGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + P + V G+ C +GDI F + GD ++ Y Sbjct: 362 ALYDAEYSVALVSRSSTAEPMVSRVVGKHCESGDIVVRDAFLPADLAPGDLLAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVRGGEAREIVRRETEEDLLR 459 >gi|256842929|ref|ZP_05548417.1| diaminopimelate decarboxylase [Lactobacillus crispatus 125-2-CHN] gi|256614349|gb|EEU19550.1| diaminopimelate decarboxylase [Lactobacillus crispatus 125-2-CHN] Length = 436 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 61/398 (15%), Positives = 121/398 (30%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ + + + + A K FAA M+ + + T S Sbjct: 31 GTPLVVYDVDQIRRQIRAFKKVFEEENMAYAVSYASKAFAAIAMYQVIAEEGAYTDVVSA 90 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E +++ K + ++ II + ++ Sbjct: 91 GELFTAIKANFPMERVSFHGNNKSLTELEMAVKNHVGKIIIDNFHEIQLLAQVLKKYDAT 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G + + + + G+ H Sbjct: 151 ISVMLRIAPGISAHTHEYDQTGQIDSKFGFDLESGQAEKALKQVLANPRMKMLGIHAHIG 210 Query: 167 CENKSFLCFSAMLKNIE----KEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + + F + + + + I++GGG Sbjct: 211 SQIFALNGFEMGAQKLMVVAQDWREKYGYLAQVINVGGGFGIKYTQEDHPLRPEEFVKTI 270 Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K +EK + I +EPG +IV TV + + + ++ Sbjct: 271 VKVIKTEAEKMNYPLPEIDIEPGRSIVGPAGYNLYTVGSRKDIPGYRSYITVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ + G+ C +GDI E VK GD ++ D Sbjct: 331 RPALYQAKYETVLATDPQAPLTEHVRIAGKYCESGDILAEDQALPQVKAGDLLAMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I+ S D Sbjct: 391 YGYSMASNYNRNPRPVVVFAENGKAKLVIKRESLEDLV 428 >gi|294495567|ref|YP_003542060.1| diaminopimelate decarboxylase [Methanohalophilus mahii DSM 5219] gi|292666566|gb|ADE36415.1| diaminopimelate decarboxylase [Methanohalophilus mahii DSM 5219] Length = 420 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 65/393 (16%), Positives = 120/393 (30%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ +L N++ G + A+K + L G SSL Sbjct: 21 PTPFHLYDEKGILENVEKLKEAFGILEGFQEYYAVKALPNPYILKILKNKGFGADCSSLP 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L GE ++ E I + +S ++ + A Sbjct: 81 ELVLAEKAGIVGENIMFSSNDTPAEEFVKAKELGAIINLDDISHIDYLEKHASLPEMIC- 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENK----- 170 + K N ++ G + E K V H + Sbjct: 140 -FRYNPGALKKGNKFIGNPEDAKYGFTREQLFEGYKKLADKGVKRFGIHTMVASNELDPT 198 Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + I + E+ +LGGGI + + + ++ +I Sbjct: 199 YFIETARILFEVIADISKELGIKFEFANLGGGIGIPYEPDQEPVPYDVIAKGVKEEYDKI 258 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 LE G I L + V + K+ +D+++ + + Sbjct: 259 ISANGLDPLKIYLECGRVITGPYGYLISKVRHLKHTYKDFAGMDATMANLMRPGVYGAYH 318 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P +T V G C D F ++IGD ++ D + + Sbjct: 319 HITVPGKENQPHDHTYDVTGSLCENNDKFAIDRKLPEIEIGDILAMHDTGAHGHAMGFNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG+ IR + DY+ L Sbjct: 379 NGKLRSAEILLREDGSTVQIRRAETMEDYFATL 411 >gi|317485778|ref|ZP_07944644.1| diaminopimelate decarboxylase [Bilophila wadsworthia 3_1_6] gi|316922972|gb|EFV44192.1| diaminopimelate decarboxylase [Bilophila wadsworthia 3_1_6] Length = 424 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 62/394 (15%), Positives = 123/394 (31%), Gaps = 34/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ L L + G + + K + + + + S E Sbjct: 28 GTPLYVYNEDVLRRRCRELLSLSSLPGFHVNYSAKANTNLALLRIVREEGCHADAMSPGE 87 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIGL 120 + + F + Y E ++ I+ +++SQL+++ K+ + Sbjct: 88 LHINKLAGFTPDRLLYVCNNVSAEEMKNAADNGLIVSVDSLSQLDQYGKV--NPGGKVMI 145 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFLC 174 RINP + ++ G + + ++ + G+ H Sbjct: 146 RINPGIGAGHHKKVITAGKETKFGIDPTSLDEVRALLKKHSLTLAGVNQHIGSLFMEPDN 205 Query: 175 FSAMLKNIEKE----FGHFITQIEWISLGGGIHFTDKDYPVKDF----------CQRLKE 220 + ++ + + IE I GGG+ + Y + L Sbjct: 206 YLNAIEFLLHFVQSDLADLLPGIEIIDFGGGLGIPYRKYEEEPRLDMAELGRRLHALLSA 265 Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE 277 + E+ Y + ++EPG +V L TV N +N + D V + Sbjct: 266 WVEETGYKGKFFIEPGRYVVAECGVLLGTVHATKFNGENRYVGTDLGFNVLVRPAMYDSF 325 Query: 278 SATIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 G + G C +GDI + +K GD ++ D Y Sbjct: 326 HDIEIFRDGGEPDTDLVEQSIVGNICESGDILAKKRMLPLIKEGDIVAALDAGAYGFVMS 385 Query: 332 NWFNGINMPTIAVKNVDGT-IKAIREFSYNDYYN 364 + +N + DGT R + +D Sbjct: 386 SSYNQRPRAAEVLITSDGTPKLIRRRETLDDLTR 419 >gi|254382308|ref|ZP_04997668.1| diaminopimelate decarboxylase [Streptomyces sp. Mg1] gi|194341213|gb|EDX22179.1| diaminopimelate decarboxylase [Streptomyces sp. Mg1] Length = 463 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 119/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP + +D++ + + A K F + + L + S E Sbjct: 63 GTPAFFLDEEDFRARCRAWAHAF-GPDADVFYAGKAFLSKAVVKWLKEEGLNLDVCSGGE 121 Query: 63 VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + A++ K AV + I+ ++ ++ + A++ + + Sbjct: 122 LTTALAAGMPAARIAFHGNNKSVAEVTRAVEAGVGRIVLDSFQEIARVAHIARERGVRQP 181 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + +R+ V + G D + + + G+ H + Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIAVADGSAAEAVRRALGHDSLELLGVHSHIGSQ 241 Query: 169 NKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F K + + ++ I LGGG+ + + + Sbjct: 242 IFDMAGFEVSAKRVVRLLAAVRDEHGVELPEIDLGGGLGIAYTSADDPREPHEIAKALHE 301 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +I +EPG AIV T V I + V VD + ++ Sbjct: 302 IVARECEAAGLRAPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E A + P V G+ C +GDI + F + GD ++ Y Sbjct: 362 ALYDAEYAVTLVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLLAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVRDGQGRVIVRRETEEDLLR 459 >gi|294633676|ref|ZP_06712234.1| diaminopimelate decarboxylase [Streptomyces sp. e14] gi|292830318|gb|EFF88669.1| diaminopimelate decarboxylase [Streptomyces sp. e14] Length = 444 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 65/397 (16%), Positives = 121/397 (30%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ ++ ++L A K F M +++ G S E Sbjct: 46 GTPVYVLDEAEVRTRCRAYRDAF--PDAEILYAAKAFLCRAMIHWMDEEGLGLDVCSAGE 103 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118 + L F E + K I+ ++ S++ + H+K+ Sbjct: 104 LELAVTTGFPAERIVLHGNAKSPRDLESALRLGVGRIVIDSPSEIARLAAAVGPRGHQKV 163 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169 +R+ P +S + G D +E + GL H + Sbjct: 164 MVRVAPGISAGGHEKIRTGTEDQKFGLSISDGCAQHAITRTLEQPQLELTGLHCHLGSQI 223 Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221 S + + + G + + LGGG + ++ Sbjct: 224 TSVEPYLSAVRRIAALMAGLHGQHGLVLPELDLGGGHGIAYRPGEPALDPTTLAREVRTE 283 Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYL 273 ++ +EPG AI VL + + V VD + + L Sbjct: 284 LTGACAAAGLPVPRLIIEPGRAIAGPAGIALYRVLAVKRTGERTYVAVDGGMSDNPRPAL 343 Query: 274 LYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 A P V GR C AGD+ V+ GD ++ Y++ Sbjct: 344 YGVRYAPCLIGRRTTAEPALVTVVGRHCEAGDVLAADVELPADVRPGDLLAVPAAGAYHL 403 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P +A +R S +D + Sbjct: 404 SMASGYNLVGRPPVAAVRDGRARLLVRRESLDDIRSR 440 >gi|228957795|ref|ZP_04119536.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801877|gb|EEM48753.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 438 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCQAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + Q ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTLCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|300214689|gb|ADJ79105.1| Diaminopimelate decarboxylase [Lactobacillus salivarius CECT 5713] Length = 430 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 66/400 (16%), Positives = 130/400 (32%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D K+ + + VK + A K F++ M+D + + G+ S Sbjct: 28 GTPTIVYDVAKIKEQIAKFKAGFEEENVKYHISYASKAFSSLAMYDLVAKSGIGSDVVSG 87 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ + + ++ K + SN II + +++ + + +K Sbjct: 88 GELYAALKGGMDPQELEFHGNNKSRAELEMAVDSNIGYIIVDNFYEIDLLNEVLTEKNKT 147 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I LR+ P + + S+ G E + + + V G+ H Sbjct: 148 ADILLRLAPGIHAETHEYISTGQAKSKFGFDLQSGQASEALEKTLANPRFKVLGVHSHIG 207 Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + ++ + + E ++LGGG D Sbjct: 208 SQIFATTGFVEAAKKLMDFLSAWKEKYDFTAEVLNLGGGFGIRYTDQDEPLDVKDFVKII 267 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +KE S++ + I ++EPG ++V TV + V + ++ Sbjct: 268 VEAVKEKSKELNYPIPAIWIEPGRSVVGEAGVSLYTVGSRKDVEGVGSFVAVDGGMGDNI 327 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + A + G+ C +GDI + + + GD I+ Sbjct: 328 RPALYGAEYDAVLAKDPNAPIAQNASIVGKFCESGDILIKDYDFPKTEPGDVIAMLSTGA 387 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +N P I ++ SY D N Sbjct: 388 YGYVMASNYNRNPRPAIVFVEDGKARLVVKRESYEDMIRN 427 >gi|293571376|ref|ZP_06682406.1| diaminopimelate decarboxylase [Enterococcus faecium E980] gi|291608515|gb|EFF37807.1| diaminopimelate decarboxylase [Enterococcus faecium E980] Length = 419 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 61/394 (15%), Positives = 129/394 (32%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D++K+ + + K+ K+L A K F M +++Y G S Sbjct: 19 QTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEMLRLVHEYGFGLDVVSG 78 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115 E+ + F + ++ K E + ++ + + ++ ++ + Sbjct: 79 GEIYTALQADFPRDAIYFHGNNKTPEELIYALENELLHVVADNLMEVELLEELSQRYSKK 138 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + LR+N V S+ G + ES + G H Sbjct: 139 VDVMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + A + + F + ++LGGG + + +Y+ Sbjct: 199 SQIFDVTAWLAEIDKLTSYLTDFEQPLS-LNLGGGFGIRYTQNDQPIPIEEALKKLIEYT 257 Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274 Q+ +EPG +IV T T+ I + D + ++ L Sbjct: 258 EEALDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317 Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 A + G+ C +GD+ + + K GD ++ Y + Sbjct: 318 QAAYDCDLAEKLSEEKTEKVTIAGKMCESGDVVIKETYLPKAKSGDLLAVYSTGAYGYSM 377 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + N + +R +++D Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLVVRRQAFSDLLR 411 >gi|47093381|ref|ZP_00231148.1| diaminopimelate decarboxylase [Listeria monocytogenes str. 4b H7858] gi|47018252|gb|EAL09018.1| diaminopimelate decarboxylase [Listeria monocytogenes str. 4b H7858] Length = 428 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 56/404 (13%), Positives = 127/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 24 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 83 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 84 GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 143 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 144 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 203 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F + I + + + ++LGGG + + +++ Sbjct: 204 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 263 Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 ++ +I++EPG ++V T V E + + + Sbjct: 264 IMDEVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 323 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 324 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 383 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P++ + +Y + N LS Sbjct: 384 AYGYAMASNYNRIPRPSVVFVENGVDKLIVARETYENLVQNDLS 427 >gi|227893383|ref|ZP_04011188.1| diaminopimelate decarboxylase [Lactobacillus ultunensis DSM 16047] gi|227864798|gb|EEJ72219.1| diaminopimelate decarboxylase [Lactobacillus ultunensis DSM 16047] Length = 437 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 65/398 (16%), Positives = 126/398 (31%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D +++ + + + + GVK + A K F+ M+ Q T S Sbjct: 31 GTPLIVYDVEQIRHQIRAFKKVFEEEGVKYAVSYASKAFSCVAMYQVAEQEGAYTDVVSA 90 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + F E +++ K + + II + ++ Q Sbjct: 91 GELYTALKTNFPVEHISFHGNNKSLAELEMAVKHHVGKIIIDNFHEIKLLDQVLKEQNAK 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G + + + N+ G+ H Sbjct: 151 IDVMLRITPGISADTHEYDQTGQVDSKFGFDLESGQADLALEQVLNNSRMNLVGIHAHIG 210 Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ E + + I++GGG Sbjct: 211 SQIFELNGFEMAAKKLMEVAENWRNQYGYTAKVINVGGGFGIKYTAEDNPLRPEKFVQAI 270 Query: 215 CQRLKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 + +K +E+ S + +EPG +IV T + + V VD + ++ Sbjct: 271 VETIKTEAERASFPVPEIDIEPGRSIVGPAGYNLYTTGSRKVIPGHRPYVAVDGGMGDNI 330 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + ++ + G+ C +GDI E K G I+ D Sbjct: 331 RPALYQAKYESVLASDPQAPSTEHVRIAGKYCESGDILAEDQALPVTKAGSLIAMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I+ S D Sbjct: 391 YGYSMASNYNRNPRPAVVFAEKGKAKVVIKRESLEDLV 428 >gi|47097095|ref|ZP_00234665.1| diaminopimelate decarboxylase [Listeria monocytogenes str. 1/2a F6854] gi|47014540|gb|EAL05503.1| diaminopimelate decarboxylase [Listeria monocytogenes str. 1/2a F6854] Length = 428 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 55/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 24 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 83 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 84 GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 143 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 144 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 203 Query: 166 NCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F ++ + + + ++LGGG + + +++ Sbjct: 204 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 263 Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 ++ +I++EPG ++V T V E + + + Sbjct: 264 IMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 323 Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + T + G+ C +GD+ G+ ++ Sbjct: 324 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 383 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 384 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 427 >gi|167629948|ref|YP_001680447.1| diaminopimelate decarboxylase [Heliobacterium modesticaldum Ice1] gi|167592688|gb|ABZ84436.1| diaminopimelate decarboxylase [Heliobacterium modesticaldum Ice1] Length = 437 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 64/399 (16%), Positives = 115/399 (28%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV-KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y++D+ L N +G ++L A K F M + Q G S Sbjct: 30 GSPLYVMDEAHLRENCRKYYQAFSASGAGEVLFASKAFMTMAMCRLVEQEGLGLDVVSGG 89 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ F E ++ K A+ I+ + + + + A Sbjct: 90 ELYTARRAGFPMEKVYFHGNNKTPAELRQAIEYGVGHIVVDNLYEADLLNAIAGETGALV 149 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEIKNVN-------GLMFHNNC 167 ++ LRI P + + S+ G + + GL H Sbjct: 150 RVLLRITPGIDCHTHEFVRTGQIDSKFGFTLPTGQALAGVKAVLERGNLIYDGLHCHIGS 209 Query: 168 ENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS- 222 + F + + + ++LGGG + Sbjct: 210 QIFELESFGYAAEVMMTFIDEIRRETGVETAILNLGGGFGIRYTEADTPGDVAEYARIVL 269 Query: 223 ----------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 + ++ +EPG +IV T TV + E I V + + Sbjct: 270 SAVALEAEKRGLPTPKVLVEPGRSIVATAGTTLYTVGSVKEIIGVRKYVAVDGGMTDNPR 329 Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L ++ N V G+ C +GD+ V+ GD ++ Y Sbjct: 330 PALYGSRYESMLANKATQEPEEVVSVTGKCCESGDMLLWDVSLPKVESGDILAVSCTGAY 389 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N +N I P + + S +D N Sbjct: 390 NYTMSMNYNRIGRPAVVFVRDGKAAVVVERESLDDLIRN 428 >gi|29829461|ref|NP_824095.1| diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] gi|29606569|dbj|BAC70630.1| putative diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] Length = 463 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 64/398 (16%), Positives = 122/398 (30%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D+ + A K F + + L++ S E Sbjct: 63 GTPGYFLDEADFRERARAWRTAF-GHDADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + A++ K E AV + I+ ++ ++ + AQ L K+ Sbjct: 122 LATALSAGMPADRIAFHGNNKSEEEIRTAVEAGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 +R+ V + G D + + + G+ H + Sbjct: 182 AQIRVTVGVEAHTHEFIATAHEDQKFGIGLADGQAAEAVRRALALDGLELVGIHSHIGSQ 241 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F ++K + + ++ I LGGG+ + + + Sbjct: 242 IFDMAGFEVAARRVVKLLAEVRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALSE 301 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +I +EPG AIV T V I + V VD + ++ Sbjct: 302 IVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLDGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + + P V G+ C +GDI + F + GD I+ Y Sbjct: 362 ALYDAEYSVALVSRASDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVHDGEARVIVRRETEEDILR 459 >gi|126176184|ref|YP_001052333.1| diaminopimelate decarboxylase [Shewanella baltica OS155] gi|160877194|ref|YP_001556510.1| diaminopimelate decarboxylase [Shewanella baltica OS195] gi|125999389|gb|ABN63464.1| diaminopimelate decarboxylase [Shewanella baltica OS155] gi|160862716|gb|ABX51250.1| diaminopimelate decarboxylase [Shewanella baltica OS195] gi|315269398|gb|ADT96251.1| diaminopimelate decarboxylase [Shewanella baltica OS678] Length = 414 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 109/382 (28%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K A + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFNNAVADHPHLICYAVKANANLAVLNVLARLGSGFDIVSGGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + E ++ K A+ + ++L A +L K Sbjct: 86 LARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIYCFNVESSAELELLNLVAGRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNC--- 167 + LRINP V ++ G + V G+ H Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEIVFARAHALPHLKVKGVDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 E K FL + + IE +GGG+ T + + Sbjct: 206 EIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDAETPPHPDVYAAAILARLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + + K IVD ++ + L Sbjct: 266 RQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + ++ Y + G C GD G+ ++ Y + +N Sbjct: 326 VPRDSEAYEFDIVGPVCETGDFLGKNRQLALAAGD-LLAVRSSGAYGFAMASNYNTRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + + + Sbjct: 385 AEVMVDGEQAFLVREREKLSQL 406 >gi|229149719|ref|ZP_04277949.1| Diaminopimelate decarboxylase [Bacillus cereus m1550] gi|228633750|gb|EEK90349.1| Diaminopimelate decarboxylase [Bacillus cereus m1550] Length = 438 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREESMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + Q ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|329114281|ref|ZP_08243043.1| Diaminopimelate decarboxylase [Acetobacter pomorum DM001] gi|326696357|gb|EGE48036.1| Diaminopimelate decarboxylase [Acetobacter pomorum DM001] Length = 447 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 115/388 (29%), Gaps = 27/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP +++ L + ++AG V + A+K + + Q G S Sbjct: 46 VGTPCWVLGAGTLRTRMRRMHAAMRDAGLDVSIHYAVKANDHLAILTLIGQEGFGADIVS 105 Query: 60 LYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL-- 114 E+ ++ K A+ I + +L A KL Sbjct: 106 GGELARAIKAGIPASRIVFSGVGKTDAELEQAISHGIGQINVESAEELEAISAIATKLGK 165 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNC 167 I LRINP V ++ G +D G H Sbjct: 166 QATITLRINPDVDAKTHAKITTGLAANKFGIPFQDAAALYAHAFTLSGVRPVGFATHIGS 225 Query: 168 ENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEF 221 + + + A + + + + GGG+ ++ +K Sbjct: 226 QILTTTPYRAAYARVAELVRSVRAAGNAVSVVDCGGGLGICYRNETEGQPEALAGAIKAE 285 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--DSSVEAHVPDYLLYQESA 279 V++ +EPG + L ++V+ E ++ + D+++ + + Sbjct: 286 LGDLGVKLAIEPGRWPIGPAGVLLSSVILRKEQGMDVPFLVLDTAMNELLRPSMYDAWHG 345 Query: 280 TIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + ++ A V G C +GD F P+ RI+ D Y + + Sbjct: 346 ILPLAPQAFSQPVSLAHVVGPVCESGDTFARDRLLPPLARNARIALLDTGAYGAVMSSTY 405 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDY 362 N + + + S + Sbjct: 406 NSRPLAAEVLVEDGQWQVIRQRQSVEEL 433 >gi|53803251|ref|YP_114999.1| carboxynorspermidine decarboxylase [Methylococcus capsulatus str. Bath] gi|53757012|gb|AAU91303.1| carboxynorspermidine decarboxylase [Methylococcus capsulatus str. Bath] Length = 375 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 183/371 (49%), Gaps = 12/371 (3%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M +TP ++ D+ + L T +G +LL ++K F + + +DG ++SSL Sbjct: 1 MPETPAFVYDQTAIDRTLSTFEEAAAGSGPRLLYSVKSFPFLPLLRRIAPRVDGLSASSL 60 Query: 61 YEVMLGHEKFGGE--THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 +E L E G H ++ EID + CD + FN++ Q +++ + + + Sbjct: 61 FEARLCAEALAGRGGLHITTPGFRPGEIDEIGRLCDFVSFNSLEQFDRWSAR-MEGTASV 119 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI---KNVNGLMFHNNCENKSFLCF 175 GLR+NP +S++ DP RP S+LG + +E+ + + G+ FH + SF Sbjct: 120 GLRVNPQLSFAPDPRYDPCRPHSKLGVPLDRLVPAEVGRLERLEGIHFHTVFDCASFEPL 179 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + +L +E + G + ++ W++LGGG + + Y +++Y EPG+ Sbjct: 180 AEILAKLENKLGERLKRLRWLNLGGGY---RLEGDLGRLAGFSTRLQRDYGLEVYFEPGK 236 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAMVC 293 A++ + L +V+D+ + V V S H P+ YQ S + G TA++ Sbjct: 237 AVIGSAGYLVASVIDVFNSGGKTVAVLDSSINHHPEVFEYQRSPRLAEVCEEGRETAILA 296 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G +CLAGD+FGE+ +IGDR+ FEDV Y + + N FNG N+P+I + + + Sbjct: 297 GGTCLAGDLFGEYALPTRPRIGDRLVFEDVGAYTLVKANRFNGHNLPSIYRWDGE-ALHL 355 Query: 354 IREFSYNDYYN 364 + + Y DY Sbjct: 356 EQSYGYEDYRR 366 >gi|134301078|ref|YP_001114574.1| Orn/DAP/Arg decarboxylase 2 [Desulfotomaculum reducens MI-1] gi|134053778|gb|ABO51749.1| diaminopimelate decarboxylase [Desulfotomaculum reducens MI-1] Length = 421 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 68/393 (17%), Positives = 121/393 (30%), Gaps = 30/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N + N G K A+K + + L + G SSL Sbjct: 19 PTPFHLYDERGIRENARRLKKAFQWNKGFKEYFAVKATPNPAILNILKEEGCGADCSSLT 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML F GE ++ + I F+ ++ ++ FK A+ I Sbjct: 79 ELMLAEAVGFAGEEIMFSSNVTPAEDFICANKLQAIINFDDITHIDFFKQIAEMPET-IS 137 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCEN 169 LR NP + ++ G E+ V H Sbjct: 138 LRYNPGGDFKISNAIMDKPGEAKYGLTRSQLTEAIKKLQLYGVKHFGLHAFLASNTTTNE 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + K + I +I+L GG+ + + E ++ + Sbjct: 198 YYPELAKILFKTAVELNDETGAHISFINLSGGVGIPYQPEQQPADIMAIGEGVKQAYAEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T L K+ + +D+ + + Sbjct: 258 LLPAGMDDVAIYTELGRFMLGPYGCLVATALHEKHIHKDYIGLDACAANLMRPAMYGSYH 317 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + G C D F + IGD + D + + Sbjct: 318 HITVMGKENQPCDHKYDITGGLCENNDKFAIDRMLPKIDIGDLLVIHDTGAHGFAMGYNY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG+ + IR + DY+ L Sbjct: 378 NGKLRSAEILLKEDGSTQLIRRAETPADYFATL 410 >gi|217975044|ref|YP_002359795.1| diaminopimelate decarboxylase [Shewanella baltica OS223] gi|217500179|gb|ACK48372.1| diaminopimelate decarboxylase [Shewanella baltica OS223] Length = 414 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 110/382 (28%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K A + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFNNAVADHPHLICYAVKANANLAVLNVLARLGSGFDIVSGGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + E ++ K A+ + ++L + A +L K Sbjct: 86 LARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIYCFNVESSAELEQLNLVAGRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNC--- 167 + LRINP V ++ G + V G+ H Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEIVFARAHALPHLKVKGVDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 E K FL + + IE +GGG+ T + + Sbjct: 206 EIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDAETPPHPDVYAAAILARLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + + K IVD ++ + L Sbjct: 266 RQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + ++ Y + G C GD G+ ++ Y + +N Sbjct: 326 VPRDSEAYEFDIVGPVCETGDFLGKNRQLALAAGD-LLAVRSSGAYGFAMASNYNTRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + + + Sbjct: 385 AEVMVDGEQAFLVREREKLSQL 406 >gi|229160470|ref|ZP_04288465.1| Diaminopimelate decarboxylase [Bacillus cereus R309803] gi|228622880|gb|EEK79711.1| Diaminopimelate decarboxylase [Bacillus cereus R309803] Length = 438 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F ++ K E A+ +N + + +L D A + K Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149 Query: 118 IGL--RINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + + R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNIIIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + Q ++ +++GGG D Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTDSDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N G + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRGDDANEELVSIAGKCCESGDMLIWDIHLPKVASSDLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 429 >gi|152974944|ref|YP_001374461.1| diaminopimelate decarboxylase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023696|gb|ABS21466.1| diaminopimelate decarboxylase [Bacillus cytotoxicus NVH 391-98] Length = 438 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ + N + + +G ++ A K F M + S Sbjct: 30 GTPLYVYDETAIRENCRAFHHAFQKSGFSYQVAYASKAFLCMEMCRVALEENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ ++ A+ +N + + +L D A K Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEMRMALEANIGCFVVDNFFELEVLHDLAEQYKKM 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + +E NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQALHAMERALEKTNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF- 221 + F ++ + I +++GGG + + + Sbjct: 210 SQIFETAGFIRAIEVLHHFLEGVKTKTGYTISVLNVGGGFGIRYTESDTPLTLEAYVQAV 269 Query: 222 ----------SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 E +I++EPG +IV + T TV I V + ++ Sbjct: 270 TDAVRERFTACEYPLPEIWIEPGRSIVGDAGTTIYTVGAIKNIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N + G+ C +GD+ + V D ++ Sbjct: 330 RPALYGARYEAMLANRANVANEEVVSIAGKCCESGDMLIWDVYLPQVVSSDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + SY + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKDGTSQVVVERESYENIIGN 429 >gi|75760421|ref|ZP_00740464.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218896450|ref|YP_002444861.1| diaminopimelate decarboxylase [Bacillus cereus G9842] gi|228900100|ref|ZP_04064333.1| Diaminopimelate decarboxylase [Bacillus thuringiensis IBL 4222] gi|228964487|ref|ZP_04125599.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar sotto str. T04001] gi|74492100|gb|EAO55273.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218544631|gb|ACK97025.1| diaminopimelate decarboxylase [Bacillus cereus G9842] gi|228795189|gb|EEM42683.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar sotto str. T04001] gi|228859506|gb|EEN03933.1| Diaminopimelate decarboxylase [Bacillus thuringiensis IBL 4222] Length = 438 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEILHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + Q ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVASADLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|229029197|ref|ZP_04185290.1| Diaminopimelate decarboxylase [Bacillus cereus AH1271] gi|228732105|gb|EEL82994.1| Diaminopimelate decarboxylase [Bacillus cereus AH1271] Length = 449 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAGQHGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 221 SQIFETAGFVRAIEVLHQFLEEVRERANYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 281 TSAVREQFTACNYPLPEIWVEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 341 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440 >gi|257897662|ref|ZP_05677315.1| diaminopimelate decarboxylase [Enterococcus faecium Com15] gi|257835574|gb|EEV60648.1| diaminopimelate decarboxylase [Enterococcus faecium Com15] Length = 419 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 62/394 (15%), Positives = 130/394 (32%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D++K+ + + K+ K+L A K F M +++Y G S Sbjct: 19 QTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEMLRLVHEYGFGLDVVSG 78 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115 E+ + F + ++ K E + ++ + + ++ ++ + Sbjct: 79 GEIYTALQADFPRDAIYFHGNNKTPEELIYALENELLHVVADNLMEVELLEELSQRYSKK 138 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + LR+N V R S+ G + ES + G H Sbjct: 139 VDVMLRLNVGVEAHTHEYIVTARIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + A + + F + ++LGGG + + +Y+ Sbjct: 199 SQIFDVTAWLAEIDKLTSYLTDFEQPLS-LNLGGGFGIRYTQNDQPIPIEEALKKLIEYT 257 Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274 Q+ +EPG +IV T T+ I + D + ++ L Sbjct: 258 EEALDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317 Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 A + G+ C +GD+ + + K GD ++ Y + Sbjct: 318 QAAYDCDLAEKLSEEKTEKVTIAGKMCESGDVVIKETYLPKAKSGDLLAVYSTGAYGYSM 377 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + N + +R +++D Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLVVRRQAFSDLLR 411 >gi|326202543|ref|ZP_08192411.1| diaminopimelate decarboxylase [Clostridium papyrosolvens DSM 2782] gi|325987127|gb|EGD47955.1| diaminopimelate decarboxylase [Clostridium papyrosolvens DSM 2782] Length = 416 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 114/392 (29%), Gaps = 32/392 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ +++ L + ++K + + + + + S E Sbjct: 25 GSPLYVYNEKILRQKCRDMKNLVDYKNFIPNYSIKANSNLTVLKIVKEEGLRADAMSAGE 84 Query: 63 V-MLGHEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + +L H F E + + E+ + N + +++SQL K + Sbjct: 85 IQLLLHAGFKPENLFFVPNNVSEAELKYAVENGVLVSVDSLSQLEILGKI--NQGGKAAV 142 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFLC 174 R NP V ++ G + K + + G+ H Sbjct: 143 RFNPGVGAGHHEKVVTAGKKTKFGVNIDCVNEVKAIAKKYNMKICGVNQHIGS-LFMEGD 201 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----------LKEFSEK 224 I+++ +GGG K ++ L+++++K Sbjct: 202 SYIEGVKSLLAVAEQFEDIDFVDMGGGFGIPYKKQEGQEPLDLASFKEKLTQVLEQWTDK 261 Query: 225 YSVQIYL--EPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 Y +I EPG IV + L V V D + Sbjct: 262 YGKKILFKTEPGRYIVAESGVLLGNVYATKANYGNKYVGTDIGFNVLARPVMYDSHHDIE 321 Query: 282 YPNTGP-------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 G V G C +GDI + + GD + D Y + + Sbjct: 322 VYRNGNPLNDSEVEEVTVVGNICESGDIIAKNRELPVINQGDILGIMDAGAYGFAMSSNY 381 Query: 335 NGINMPTIAVKNVDGT-IKAIREFSYNDYYNN 365 N P + DG + R ++ D N Sbjct: 382 NMRLRPAEVLIKEDGEPVLIRRRDTFEDLIAN 413 >gi|255280715|ref|ZP_05345270.1| diaminopimelate decarboxylase [Bryantella formatexigens DSM 14469] gi|255268652|gb|EET61857.1| diaminopimelate decarboxylase [Bryantella formatexigens DSM 14469] Length = 422 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 111/392 (28%), Gaps = 31/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ +++ L + + + K + + + S E Sbjct: 28 QTPLYVYNERILRQRCRDLKNMVTYPKFVVDYSAKANSNLAFLQVVKSEGLEVDAMSPGE 87 Query: 63 VMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + F E Y E+ + + +++SQL +F A ++ + Sbjct: 88 IYVERAAGFAPEEIFYIGNNVSAEEMQYAIDAGVRVSVDSLSQLEQFGQLA--PGGEVAI 145 Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLC 174 R NP V ++ G + ++ +E + G+ H Sbjct: 146 RFNPGVGAGHHEKVITAGKKTKFGIEPKYIPQIRELLEKYHLKLVGINQHIGS-LFMTGE 204 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----------CQRLKEFSE 223 E ++E+I +GGG K + K E Sbjct: 205 AFTASIAALLEIAKQFPELEFIDMGGGFGIPYKKEEDQAPLDLKGLGAAIDEALWKFTRE 264 Query: 224 KYSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI 281 + +EPG I + + + V + N + D + Sbjct: 265 YGREVTFRIEPGRYISAECSVILSEVHSVKHNNDKKFVGCDCGFNVLQRPIMYDSYHGIE 324 Query: 282 YPN------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 V G C +GDI + + GD + D Y + +N Sbjct: 325 VYRGSEVKSEKTEPVTVVGNICESGDILAKDRVLPEIFKGDILGILDAGAYGFTMASNYN 384 Query: 336 GINMPTIAVKNVDGTIKAIR-EFSYNDYYNNL 366 P + +G + IR D ++ Sbjct: 385 NRLRPAEVMLRENGEVVLIREREELEDLLRHM 416 >gi|42780616|ref|NP_977863.1| diaminopimelate decarboxylase [Bacillus cereus ATCC 10987] gi|42736536|gb|AAS40471.1| diaminopimelate decarboxylase [Bacillus cereus ATCC 10987] Length = 438 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDINLPKVASADLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 429 >gi|241896460|ref|ZP_04783756.1| diaminopimelate decarboxylase [Weissella paramesenteroides ATCC 33313] gi|241870440|gb|EER74191.1| diaminopimelate decarboxylase [Weissella paramesenteroides ATCC 33313] Length = 438 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 63/395 (15%), Positives = 119/395 (30%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D + + + + + + A K FA M++ Q S Sbjct: 38 QTPLYVYDVNHIRQQMRSFKEVFMNRQIDYVVSYASKAFATIAMYEVAAQEGIHLDVVSG 97 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + ++N K E + + TII + +L+ D + Sbjct: 98 GEIQTALAANYPMSQVSFNGNNKSIEELEMAIDNGLGTIILDNFYELSVLHDLLSERDKT 157 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 + + LRI P V + S+ G + I NV G+ H Sbjct: 158 QDVLLRITPGVEAHTHDYISTGQTDSKFGFDVNSGQAYAALQKAIADPYLNVLGVSAHIG 217 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFS 222 + F + + + + I+ GGG + + + Sbjct: 218 SQIFDVTGFKMAAEKLVDLVHEWGFDPQVINTGGGFGIRYTADDKPLPATEFVEAIIDTI 277 Query: 223 EKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273 + I++EPG AIV T+ + VD + ++ L Sbjct: 278 TEKTTLYGMTMPAIWIEPGRAIVGPAGYNLYTIGSRKDVPGIRTYLSVDGGMGDNIRPAL 337 Query: 274 LYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + I N V G+ C +GD+ K GD ++ Y + Sbjct: 338 YEAKYEAILANNPQAPTEEVVRVAGKYCESGDVLVWQQALPKTKPGDVLAVLATGAYGYS 397 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + + + +Y D Sbjct: 398 MASNYNRNPRPAVVFVEGGQSQLVVERETYADMLR 432 >gi|297157206|gb|ADI06918.1| diaminopimelate decarboxylase [Streptomyces bingchenggensis BCW-1] Length = 463 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 61/398 (15%), Positives = 118/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D+ A + A K F + LN+ S E Sbjct: 63 GTPGYFLDENDFRARCRAWREAF-GADADVFYAGKAFLCRAVVRWLNEEGLNLDVCSAGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E A + K AV + I+ ++ ++ + A++L K+ Sbjct: 122 LATALGAGMPAERIALHGNNKSEAEIRRAVEAGVGRIVLDSFQEIVRVAHIAERLGKRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 +R+ V + G + ++ + + G+ H + Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIPLAGGLAAEAVRRALKLDGLELIGVHSHIGSQ 241 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKE 220 F +++ ++ I LGGG+ + L++ Sbjct: 242 IFDTSGFEVAAHRVVGLLKEIRDEHGIELPEIDLGGGLGIAYTSEDDPSEPHQIAKALRD 301 Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + ++ +EPG AI TT V + E V + ++ Sbjct: 302 IVHRECEAAGLEVPRLSVEPGRAIAGPTTFTLYEVGTVKELPALRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + P + V G+ C +GDI F + GD I+ Y Sbjct: 362 ALYDAEYSVALVSRISTAEPMLSRVVGKHCESGDIVVRDAFLPADLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVKDGQAREIVRRETEEDLLR 459 >gi|329733442|gb|EGG69774.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 21193] Length = 421 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYTALEAGFEPNRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEDDKSFPIESGIKDITDTIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|297154267|gb|ADI03979.1| diaminopimelate decarboxylase [Streptomyces bingchenggensis BCW-1] Length = 448 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 61/397 (15%), Positives = 130/397 (32%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ ++ + T ++L A K F + +++ G S E Sbjct: 50 GTPVYVLDEAEVRDRCRTYRDAF--PDAEILYAAKAFLCQALVHWVDEEGLGLDVCSAGE 107 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA-QKLHKKI 118 + L F E + K I+ ++ S++ + H+K+ Sbjct: 108 LELAVTAGFPPERIVLHGNAKSPRDLETALRLGVGRIVIDSPSEIARLAAAVGPDGHQKV 167 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169 +R+ P +S + G D ++ + GL H + Sbjct: 168 MVRVVPGISAGGHEKIRTGTDDQKFGLSISDGYAQHAIARILDQPQLELTGLQCHLGSQI 227 Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221 S + M+ + + + + LGGG + + ++++ Sbjct: 228 TSVKPYLSAVRRMVGLMARLHEQHGLVLPELDLGGGHGIAYRPGEEALDLTTLARKVRME 287 Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYL 273 + ++++EPG A+V VL + ++ + +D + + L Sbjct: 288 LVEACGAAGLTVPRLFIEPGRAVVGPAGVAVYRVLSVKHTGEHTYVAIDGGMSDNPRPSL 347 Query: 274 LYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 P V GR C AGDI +++GD ++ Y++ Sbjct: 348 YGVRYTPRLVGRHSTAEPTRVTVVGRHCEAGDILATAVELPGDIRLGDLLAVPVAGAYHL 407 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P +A +R S+ D Sbjct: 408 SMASAYNMVGRPPVAAVRDGRARLLVRRESFEDIRRR 444 >gi|229172157|ref|ZP_04299722.1| Diaminopimelate decarboxylase [Bacillus cereus MM3] gi|228611500|gb|EEK68757.1| Diaminopimelate decarboxylase [Bacillus cereus MM3] Length = 449 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 119/400 (29%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQVIEIALQKSNYNVLGIHSHIG 220 Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + + + +E+ ++ +++GGG + Sbjct: 221 SQIFETAGFVRAIEVLRQFLEQVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 281 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 341 RPALYNARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440 >gi|170290535|ref|YP_001737351.1| diaminopimelate decarboxylase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174615|gb|ACB07668.1| diaminopimelate decarboxylase [Candidatus Korarchaeum cryptofilum OPF8] Length = 383 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 68/368 (18%), Positives = 130/368 (35%), Gaps = 17/368 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ID ++ N K V + A K + L + G T S + Sbjct: 16 GTPTYVIDLDRVKENYLRLDKAIKCPHV-IAYAYKANHEPELVKLLAKLGSGATVPSAFG 74 Query: 63 VMLGH-EKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V+L E + ++ + I + SQ N + + + Sbjct: 75 VILARISGVPPEKTVLVGPSPSRGDLIEAMDFGAIISIESHSQANALRSI---GRANVMV 131 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCENKSFLCF 175 R+NP V + S+ G ++ + + G H + S F Sbjct: 132 RVNPGVGAGAYPGLVTGGKRSKFGLPPEEALSLFNSLKKDMRALGFHTHIGSQIFSTDPF 191 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIYLE 232 A L I+ +E + LGGG+ +P++++ + + E + +++LE Sbjct: 192 RAALDVIKGLAERVG-GVEIVDLGGGLGVPYSNESPFPLEEYAELVCERVREMGTKLFLE 250 Query: 233 PGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291 G IV + L + V + E + +++D+ + + L I G + Sbjct: 251 TGRYIVADAGYLLSRVNYVKEVGGEKWLLIDAGMNDLIRPALYGARHEIICEGEGRERVL 310 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 V G C + D FGE+ +K GD I+F++ Y + + +N +P + Sbjct: 311 VAGPVCESSDFFGEY-ELPKLKEGDLIAFKNAGAYGFSMASRYNLRPLPAVVGIEGGRFR 369 Query: 352 KAIREFSY 359 + Sbjct: 370 LLRPREDF 377 >gi|332662084|ref|YP_004444872.1| diaminopimelate decarboxylase [Haliscomenobacter hydrossis DSM 1100] gi|332330898|gb|AEE47999.1| diaminopimelate decarboxylase [Haliscomenobacter hydrossis DSM 1100] Length = 409 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 112/384 (29%), Gaps = 26/384 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ + + + + +K+ A K + + Q S+ E Sbjct: 24 GSPLYVYEAETIERQYQRLKAAFQVEKLKISYACKALTNISILKFIKQLGSTIDCVSIQE 83 Query: 63 VMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V + F Y + EI+ ++ I + + + KF + H I + Sbjct: 84 VQMALRAGFAPVDVLYTPSGVHFSEIEEAVALGVRINLDNIPAIEKFGEIY--PHIPICV 141 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174 RINP + + S+ G + +E+ + GL H + + Sbjct: 142 RINPHIMAGGNLKTSVGHIDSKFGISYQQMPLVQGILETTGMKLEGLHMHTGSDILNPDA 201 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 F A ++ +++I G G K ++ + L E E G Sbjct: 202 FIA-GADVMLNLAKDYPDLDYIDFGSGFKVPYKPNDLETNIEELGEKLSAKFNTFCQEYG 260 Query: 235 EAIVT----------NTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQESATI 281 AI + TV + VDS + + Y + + Sbjct: 261 RAITMVFEPGKFLVSEAGSFLVTVNVVKHGVTTVFAGVDSGLNHLIRPMFYDAYHRISNL 320 Query: 282 YPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 G T V G C D F + GD + + Y + + +N P Sbjct: 321 SNPEGKTQTYNVVGYICET-DTFATKREIPEIAPGDVLCMHNAGAYCYSMASNYNSRLRP 379 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 380 AEVLIYQGKDFLIRERETIEDLFK 403 >gi|227903734|ref|ZP_04021539.1| diaminopimelate decarboxylase [Lactobacillus acidophilus ATCC 4796] gi|227868621|gb|EEJ76042.1| diaminopimelate decarboxylase [Lactobacillus acidophilus ATCC 4796] Length = 456 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 65/398 (16%), Positives = 125/398 (31%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ N + + + GV + A K FA M+ N+ T S Sbjct: 52 GTPLVVYDVNRIRNQIRAFKKVFEEEGVSYAVSYASKAFACIAMYQVANEEGAYTDVVSA 111 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E +++ K + ++ II + ++ + + Sbjct: 112 GELYTALKAGFPAEKISFHGNNKSLAEIEMAVKNHVGKIIIDNFHEIELLDQVLHQYDTQ 171 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I LRI P +S + S+ G + + + N+ G+ H Sbjct: 172 INVMLRITPGISAHTHEYDQTGQIDSKFGFDLESGQADLALERVLANSRMNMLGIHAHIG 231 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + F +++ E + + I++GGG + Sbjct: 232 SQIFELNGFELAAKKLMEVAENWRSQYGYTAKIINVGGGFGIKYTADDNPLKPEEFVRTI 291 Query: 223 EKY-----------SVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 + + +I +EPG +IV TV + V VD + ++ Sbjct: 292 IETIKKGSADAAFPTPEIDIEPGRSIVGPAGYNLYTVGSCKTIPSYSPYVAVDGGMGDNI 351 Query: 270 PDYLLYQESATIYPNTGPYTA----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N + G+ C +GDI VK GD ++ D Sbjct: 352 RPALYQAKYDVVLANNPKAPVVNRVRIAGKYCESGDILATES-LPEVKSGDVLAMLDTGA 410 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + ++ S D Sbjct: 411 YGYSMASNYNRNPRPAVVFAENRKAHLVVKRESLEDLV 448 >gi|160933534|ref|ZP_02080922.1| hypothetical protein CLOLEP_02380 [Clostridium leptum DSM 753] gi|156867411|gb|EDO60783.1| hypothetical protein CLOLEP_02380 [Clostridium leptum DSM 753] Length = 432 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 59/401 (14%), Positives = 122/401 (30%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ + + A K + + + G S Sbjct: 30 GTPLYVMDEMTIRQACRLYQKSFQENYDGHGMAFYASKALNCKELCRIVAEEGLGLDVVS 89 Query: 60 LYEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKL 114 E+ F E ++ +D A+ + I+ + + ++ + A + + Sbjct: 90 GGELYTALKAGFDPEKIHFHGNNKTQDELNMALDNGVGVIVMDNLDEMKRLDQLAAEKGV 149 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHN 165 ++ +RI P + + S+ G + I S+ N+ + H Sbjct: 150 TAQVSMRIKPGIDAHTHSFIRTGQIDSKFGFALETGEALEAAKAAIASKNLNLKEIHCHI 209 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLK-- 219 + F + + +E ++LGGG D Sbjct: 210 GSQIFDIDPFVLAAEVMMGFRKQIKDVTGVTVECMNLGGGFGIKYTDRDHPQPYNAYMST 269 Query: 220 ---------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 + + I LEPG +IV + TV + K V + + Sbjct: 270 VAKAVKAKAKEYDMPVPFICLEPGRSIVGESGITLYTVGSVKVIPKIRTYVSIDGGMTDN 329 Query: 269 VPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 L + + + G+ C +GD+ E + GD ++ Sbjct: 330 PRYALYKSSYLAVIADKAGQPAVEKVTIAGKCCESGDLIQEDAMIQEAAPGDTLAVFSTG 389 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P I + + ++ +Y+D N Sbjct: 390 AYNYSMSSNYNRIPKPPIVMVKAGSSRVIVKRETYDDLIKN 430 >gi|227544852|ref|ZP_03974901.1| diaminopimelate decarboxylase [Lactobacillus reuteri CF48-3A] gi|300909927|ref|ZP_07127387.1| diaminopimelate decarboxylase [Lactobacillus reuteri SD2112] gi|227185172|gb|EEI65243.1| diaminopimelate decarboxylase [Lactobacillus reuteri CF48-3A] gi|300892575|gb|EFK85935.1| diaminopimelate decarboxylase [Lactobacillus reuteri SD2112] Length = 441 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 70/398 (17%), Positives = 129/398 (32%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D Q++ + + + V + A K F+A M+ + S Sbjct: 36 GTPLVVYDVQQIRQQIRAFKRVFEENNVDYAVSYASKAFSAIAMYQVVAAEGAHVDVVSG 95 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F +++ K E + + TI+ + ++ D +KL Sbjct: 96 GELYTAIKAGFPMADVSFHGNNKSREELEMAIDHHVGTIMIDNFHEIELLADVLEKLDAH 155 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G E +E+ + GL H Sbjct: 156 VDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALAKVLENPRMQMKGLHAHIG 215 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + F +++ F Q I++GGG Sbjct: 216 SQIFELAGFEGVAKKLVEVAAHWQEKFNYQAAVINVGGGFGIRYVKDDTPLAPEEFVAAI 275 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + +K ++ I++EPG +I TV + K V VD + ++ Sbjct: 276 IKAIKAEIKETNLAMPAIWIEPGRSIAGPAGYNLYTVGSRKDVPGLKPYVTVDGGMGDNI 335 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ N V G+ C +GDI + K GD ++ D Sbjct: 336 RPALYEAQYETVLANNPRAELVEHVRVAGKYCESGDILSQNQVLPATKPGDVLAMLDTGA 395 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I+ +Y+D Sbjct: 396 YGYSMASNYNRNPRPAVVFAEKGTAQVVIKRETYDDLV 433 >gi|317131446|ref|YP_004090760.1| diaminopimelate decarboxylase [Ethanoligenens harbinense YUAN-3] gi|315469425|gb|ADU26029.1| diaminopimelate decarboxylase [Ethanoligenens harbinense YUAN-3] Length = 432 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 67/401 (16%), Positives = 125/401 (31%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ + N + N+ ++ A K F + + G S Sbjct: 30 GTPLYVMDEATITQNCRKYVESIGTYYNSRGRVYYASKAFCCKEICRIMENAGMGLDVVS 89 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNT--VSQLNKFKDKAQKL 114 E+ F + ++ K A+ + + L A+ Sbjct: 90 GGELYTAMSVGFPADRICFHGNNKTPGEINYALDCGVGRFVVDNLTELALLNTLALARNK 149 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHN 165 + RI P + + S+ G E + + ++ G+ H Sbjct: 150 KPSVLFRIKPGIDAHTHNFIRTGQIDSKFGLALETGEAEEAVRQAVALPGVSLTGMHCHI 209 Query: 166 NCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKD------YPVKDFC 215 + F M+ + + ++LGGG Y Sbjct: 210 GSQIFDIAPFELAAEVMVNFMADMRDRHGADLTELNLGGGFGIQYVPGQNPVPYDRYMQA 269 Query: 216 --QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 + +K+ E ++ I LEPG +IV + TV + + V + + Sbjct: 270 VSETVKKTCEARDMETPFIMLEPGRSIVASAGITLYTVGAVKDIPGVRTYVSVDGGMGDN 329 Query: 269 VPDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 L E A + T + G+ C +GD+ E +PV+ GD ++ Sbjct: 330 PRYALYQAEYAAVVAGKAAEKPTETVTIAGKCCESGDLIQEHTAIQPVQAGDILAVFATG 389 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P + IR S+ D N Sbjct: 390 AYNYSMASNYNRIPRPATVMIRDRQPRVIIRRESFEDLVRN 430 >gi|229155087|ref|ZP_04283200.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 4342] gi|228628372|gb|EEK85086.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 4342] Length = 449 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 123/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 41 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + F ++ K E A+ +N + + +L D A Sbjct: 101 GELYTALQSGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + + ++ +++GGG + Sbjct: 221 SQIFETAGFVRAIEVLRQFLEEVRERTHYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 281 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 341 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440 >gi|291458446|ref|ZP_06597836.1| diaminopimelate decarboxylase [Oribacterium sp. oral taxon 078 str. F0262] gi|291418979|gb|EFE92698.1| diaminopimelate decarboxylase [Oribacterium sp. oral taxon 078 str. F0262] Length = 484 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 67/393 (17%), Positives = 124/393 (31%), Gaps = 29/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+YL D++ + N N G + A+K + L + GT SSL Sbjct: 77 PTPFYLYDEEGIRENARRLKQAFSWNPGFREYFAVKATPNPEILRILREEGCGTDCSSLA 136 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ + F G+ ++ E I + S + + ++ + + Sbjct: 137 ELEMSEACGFRGQEIMFSSNDTPLSEYRFAEKLGAIINLDDFSNIEELRETLGGFPETLC 196 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFH------NNCEN 169 LR NP + N ++ G + +E + V H Sbjct: 197 LRYNPGGYFKIANTIMDNPQDAKFGMTEEQILEGFRILKAGGVKHFGIHAFLASNTVSNE 256 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224 + + ++ +I+L GG+ + + + E + Sbjct: 257 YYPTLARQLFTLAVRVKEDCGIRLSFINLSGGVGIAYRPEEKPNDILAIGEGVHRVYDEI 316 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 V+I+ E G ++ L T V+ E K+ VD+ + + Sbjct: 317 LGKNGLSDVRIFTELGRFMLAPYGALITRVIHFKETYKHYAGVDACAANLMRPAVYGAYH 376 Query: 279 ATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 G + V G C D F ++ GD + D + + Sbjct: 377 HITVLGKEKEEGTESYDVVGSLCENNDKFAVDRRLPRLEKGDLLFIHDAGAHGFAMGYNY 436 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG +K DG++K IR + DY+ L Sbjct: 437 NGKLWCAELLKKRDGSVKLIRRAETPRDYFATL 469 >gi|253576361|ref|ZP_04853691.1| diaminopimelate decarboxylase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844254|gb|EES72272.1| diaminopimelate decarboxylase [Paenibacillus sp. oral taxon 786 str. D14] Length = 442 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 124/398 (31%), Gaps = 36/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + + + +G ++ A K F M + S Sbjct: 30 GTPLYIVDEALVRQRCREYMDAFRASGLSFQVAYASKAFCVMAMCRLAEEEGLSLDVVSE 89 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + ++ D A+ + + + ++L+ + A + + Sbjct: 90 GELYTALQAGFPAQRIHFHGNNKTPDELEMAISAGIGCFVADNFTELHMLQALAAEKGVT 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LR+ P V + S+ G E S ++ G+ H Sbjct: 150 VNVLLRVTPGVEAHTHEYISTGQTDSKFGFDIGNGSALEAVDLANRSLNLHLLGVHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC------- 215 + F ++ + Q+ + ++LGGG + Sbjct: 210 SQIFEVEGFQLAVERVAAFAMQVKDQLGVIFKVVNLGGGFGIRYTEGDTPLKVSDYVGAI 269 Query: 216 -QRLKEFSEKYSV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 +K Y +I++EPG +IV + T TV + V + + Sbjct: 270 TDAVKREFADYPQLPEIWVEPGRSIVGDAGTTLYTVGTSKDIPGVRKYVAVDGGMTDNPR 329 Query: 271 DYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + + + T + G+ C +GD+ V GD ++ Y Sbjct: 330 PALYGSKYEAMLANRANDANEETVSIAGKCCESGDMLIWDVELPKVNSGDLLAVSCTGAY 389 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + +N I P + + ++ S D Sbjct: 390 NYAMASNYNRIRRPAVVFVQDGRSDLVVKRESLQDLVA 427 >gi|206968100|ref|ZP_03229056.1| diaminopimelate decarboxylase [Bacillus cereus AH1134] gi|206737020|gb|EDZ54167.1| diaminopimelate decarboxylase [Bacillus cereus AH1134] Length = 438 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREESMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + Q ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|729299|sp|P41023|DCDA_BACMT RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|304155|gb|AAC36985.1| diaminopimelate decarboxylase [Bacillus methanolicus MGA3] Length = 432 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 55/391 (14%), Positives = 118/391 (30%), Gaps = 37/391 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + G+K + A K F+ M + S Sbjct: 30 GTPLYVYDVALIRERARGFKNTFDELGIKAQVAYASKAFSTVAMIQLAEEEGLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K + I+ + +L+ + + Sbjct: 90 GELYTALVAGFPVHKIHFHGNNKSRAELEMALEHQIGCIVVDNFHELDLIDSICSEKNVK 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I LR+ P + + S+ G ++ + S V G+ H Sbjct: 150 TNILLRVTPGIEAHTHDYILTGQEDSKFGFDLQNGQAEKALQIALNSNFVEVLGVHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKDFC-QRLKEF 221 + F + I ++ + ++ + ++LGGG + Q +KE Sbjct: 210 SQIFDTTGFVLAARKIFEKLKEWKDRLSYEPKVLNLGGGFGIRYTEEDDPIPASQYVKEI 269 Query: 222 SEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG ++V + T + + V + ++ Sbjct: 270 INEVKKQVSAYSMKMPEIWIEPGRSLVGDAGTTLYQIGSRKDVPNVRHYVAVDGGMSDNI 329 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N T + G+ C +GD+ D ++ Sbjct: 330 RPALYNAKYEAVLANKPLAKADETVSIAGKCCESGDMLIWDLPLPKADSDDILAVFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 Y + N +N I P + ++ ++ Sbjct: 390 YGYSMANNYNRIPRPAVVFVENGESMLVVKR 420 >gi|153002477|ref|YP_001368158.1| diaminopimelate decarboxylase [Shewanella baltica OS185] gi|151367095|gb|ABS10095.1| diaminopimelate decarboxylase [Shewanella baltica OS185] Length = 414 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 110/382 (28%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K A + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFNNAVADHPHLICYAVKANANLAVLNVLARLGSGFDIVSGGE 85 Query: 63 VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + E ++ K A+ + ++L + A +L K Sbjct: 86 LARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIYCFNVESSAELEQLNLVAGRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNC--- 167 + LRINP V ++ G + V G+ H Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEIVFARAHALPHLKVKGVDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 E K FL + + IE +GGG+ T + + Sbjct: 206 EIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDAETPPHPDVYAAAILARLGD 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + + K IVD ++ + L Sbjct: 266 RQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + ++ Y + G C GD G+ ++ Y + +N Sbjct: 326 VPRDSEAYEFDIVGPVCETGDFLGKNRQLALAAGD-LLAVRSSGAYGFAMASNYNTRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + + + Sbjct: 385 AEVMVDGEQAFLVREREKLSQL 406 >gi|324325535|gb|ADY20795.1| diaminopimelate decarboxylase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 438 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ K E A+ +N + + +L D A Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLEAVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTLCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDINLPKVASADLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 429 >gi|228920229|ref|ZP_04083577.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228938632|ref|ZP_04101237.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971513|ref|ZP_04132137.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978124|ref|ZP_04138502.1| Diaminopimelate decarboxylase [Bacillus thuringiensis Bt407] gi|228781596|gb|EEM29796.1| Diaminopimelate decarboxylase [Bacillus thuringiensis Bt407] gi|228788172|gb|EEM36127.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821008|gb|EEM67028.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228839428|gb|EEM84721.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|326939140|gb|AEA15036.1| diaminopimelate decarboxylase [Bacillus thuringiensis serovar chinensis CT-43] Length = 438 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + Q ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVASADLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|295106272|emb|CBL03815.1| diaminopimelate decarboxylase [Gordonibacter pamelaeae 7-10-1-b] Length = 458 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 128/400 (32%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 T Y++D++ + ++T L + ++ A K F +N+ S Sbjct: 57 GTALYVMDERDMRTRMETYLEAFRSRYGNADVVYASKAFLNKEAARIVNEEGLCLDVSGG 116 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F E + K + +A+ + I+ ++ +L + + A +L Sbjct: 117 GELACALATGFPAERIFMHGNNKTPQELREAIQAGVGRIVIDSRIELRRISEIAGELGVE 176 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 + + +RI P V S+ G KD + + + GL H Sbjct: 177 QPVYMRITPGVEADTHQYIRTGCEDSKFGFTMREDFAFKCVKDVLAAPNVRLAGLHCHIG 236 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------- 215 + M+ + + + ++ + +GGG+ Sbjct: 237 SQIFALHSYPEAVEVMVDLMARIREAYGIELSELDMGGGLGVAYTADDKPASIDEFAETI 296 Query: 216 -QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 ++ K+ + + +EPG ++V TV I V + ++ Sbjct: 297 TAAVRTACAKHGMPEPRLLVEPGRSLVATAGVTLYTVGIIKTLPNIRKYVAVDGGMSDNI 356 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + N + G+ C +GD + +GD ++ Sbjct: 357 RTALYHADYEPVVANKAAQPRTEIVTIAGKHCESGDAVVIDMPMQRPDLGDVVAVFGTGA 416 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + +NG P + R +Y D Y+ Sbjct: 417 YNHTMSSNYNGQPRPAVVFVKDGEARVTTRRETYEDLYSR 456 >gi|291542677|emb|CBL15787.1| diaminopimelate decarboxylase [Ruminococcus bromii L2-63] Length = 432 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 70/401 (17%), Positives = 128/401 (31%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ + N + + L A K + + + G S Sbjct: 30 GTPLYVLDETTIRNVCKAYVKSFEKYYHGNGMPLYASKALSCKELCRIAKEEGLGLDVVS 89 Query: 60 LYEVMLG-HEKFGGET-HAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ F E H + EI A+ SN + + + +L + ++ K Sbjct: 90 GGEIYTAVQAGFPMEKVHFHGNNKTADEIRFALESNVGKFVVDNLYELELLNEICGEMGK 149 Query: 117 KIGL--RINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHN 165 K + RI P V + S+ G E K + N+ L H Sbjct: 150 KANISFRIKPGVDAHTHNFIRTGQIDSKFGFALETGEAFEAVKKAQMYDNVNLTELHCHI 209 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYP--------VKD 213 + F + + G I ++LGGG ++ Sbjct: 210 GSQIFDIDPFVTAAEIMLDFMGKIHDELGIVISELNLGGGFGIMYTKDDEPVPYENYMEK 269 Query: 214 FCQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 + +K ++++ + I++EPG +IV V E V + + Sbjct: 270 VSEAVKAKAKEHGLPVPYIFIEPGRSIVGEAGITLYKVGGKKEIPNVRTYVSVDGGMTDN 329 Query: 269 VPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + V G+ C +GD+ E V++GD ++ Sbjct: 330 IRYALYQSAYTVVNAGKADKEPDEIVTVAGKCCESGDLVQEHTKVAKVEVGDTLAVLSTG 389 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N I P I + ++ SY D N Sbjct: 390 AYNYSMASNYNRIPRPAIVMVKDGKARVVVKRESYEDIVKN 430 >gi|228951897|ref|ZP_04113995.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807820|gb|EEM54341.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 438 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAITFALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLVEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVASSDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|330684722|gb|EGG96420.1| diaminopimelate decarboxylase [Staphylococcus epidermidis VCU121] Length = 421 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 64/394 (16%), Positives = 135/394 (34%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D++++ N + + +G+K + A K F M + + S Sbjct: 26 GTPTIVYDEEQIRNQMRRYHKAFQQSGLKYNISYASKAFTCIQMVKLVQEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K ++ + +++ +++ A + + Sbjct: 86 GELYTALEAGFDPSRIHFHGNNKTKHEIRYALDNHIGYFVIDSLEEIDLIDRYASETVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G E +++ N+ G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIRYGLANEAVDKIKQAKHLNLKGVHIHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKE 220 + F K + Q++ ++LGGG + V + +K Sbjct: 205 IEGTEAFIETAKIVMNWLNDQQIQVDLLNLGGGFGIKYVEGDVSFPIESGIAEITDAIKN 264 Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 + + +++ +EPG +IV V I E + V + H+ L Sbjct: 265 EANQLNMETPEIGIEPGRSIVGEAGITLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ T + G+ C +GDI + V+ GD ++ Y+ + Sbjct: 325 AKYQALLVNRHEEANDTVTIAGKLCESGDIIIKNAKLPSSVQRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFIKDGKAREVIKRQSLRQLIIN 418 >gi|269121588|ref|YP_003309765.1| diaminopimelate decarboxylase [Sebaldella termitidis ATCC 33386] gi|268615466|gb|ACZ09834.1| diaminopimelate decarboxylase [Sebaldella termitidis ATCC 33386] Length = 435 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 69/400 (17%), Positives = 134/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D++ + + +D + ++ A K F GM + +N+ S Sbjct: 30 GTPLYVMDQKLIEDTIDIMKEAFVSERFNTQIAYAGKAFLTTGMVNLVNKKGLDLDVVSA 89 Query: 61 YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E + + A+ I+ + ++ K + ++ +KK Sbjct: 90 GELYTAVKAGFPMERIHMHGNNKSDEELNMAIEYGIKEIVIDNEDEIEKIERICREKNKK 149 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 LRI+P + + S+ G K +SE G H Sbjct: 150 QAVLLRIDPGIEAHTHEYIKTSGLTSKFGVSLFQENLFDIVKRLDDSEFIEFKGFHTHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKD--------- 213 + F L I K +E +++GGG + Sbjct: 210 SQIFQSAFFIFALDEIFKYLSKLKEELGIAVETVNMGGGFGVYYAEGDQPPKLDELLKEV 269 Query: 214 --FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + + ++ +Y+EPG +IV N T TV I E + K V VD + ++ Sbjct: 270 ITYTEAMEIKYRIGFKNLYIEPGRSIVANAGTTLYTVGGIKETVGGKTYVFVDGGMADNI 329 Query: 270 PDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ + ++GD I+ Sbjct: 330 RPALYQAKYEAGIINKLKDEDRKEITLAGKFCESGDVLIGNAKLQNAEVGDIIAVPTTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + A++ + +D N Sbjct: 390 YCYSMSSNYNRFAKPALVFVKDGQAKLAVKRETLDDLVRN 429 >gi|47566309|ref|ZP_00237337.1| diaminopimelate decarboxylase [Bacillus cereus G9241] gi|47556862|gb|EAL15193.1| diaminopimelate decarboxylase [Bacillus cereus G9241] Length = 438 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 123/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + F ++ K E A+ +N + + +L D A Sbjct: 90 GELYTALQSGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVRERTHYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 429 >gi|319944763|ref|ZP_08019027.1| exopolyphosphatase [Lautropia mirabilis ATCC 51599] gi|319742012|gb|EFV94435.1| exopolyphosphatase [Lautropia mirabilis ATCC 51599] Length = 430 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 115/388 (29%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ +Q + ++ A+K + + Q G S E Sbjct: 38 GTPLYVYSRQAIEATWQRFAQALTGRDARICFAVKASSNLAILGLFAQLGAGFDVVSGGE 97 Query: 63 -VMLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ K D A+ ++ ++ +L + A Sbjct: 98 LARVIAAGGDPRKVVFSGVGKSGDEIRQALAADIACFNVESLPELERINQIAGEMGKRAP 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LRINP V + ++ G + + ++G+ H + Sbjct: 158 VSLRINPDVDAATHPYISTGLKENKFGIPHSQALAAYRQAAALPHLQIHGIDCHIGSQIT 217 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F A L + + I + LGGG+ + ++ ++ + Sbjct: 218 EASPFLAALDRVLALVDQLEAEGIAIGHLDLGGGLGIRYDNETPPTPEALMQALFDRLTQ 277 Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESA 279 + E G A+V N L T + + +N ++ +VD+++ + L Sbjct: 278 WRPDGLPGVTFEFGRALVGNAGLLLTCLEYLKDNEGQHFAVVDAAMNDLMRPALYQAYHR 337 Query: 280 TIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 N G TA V G C +GD + ++ Y + +N Sbjct: 338 VEVVNPGNAPVVTADVVGPVCESGDWLARKRPLA-LPPDAVLAILSAGAYGSTMASNYNS 396 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 P + + + D Sbjct: 397 RPRPAEVLIDGKHVHLIRERETMADLLR 424 >gi|229189600|ref|ZP_04316615.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 10876] gi|228593864|gb|EEK51668.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 10876] Length = 438 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREESMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIRFAVQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + Q ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|330994277|ref|ZP_08318205.1| Diaminopimelate decarboxylase [Gluconacetobacter sp. SXCC-1] gi|329758744|gb|EGG75260.1| Diaminopimelate decarboxylase [Gluconacetobacter sp. SXCC-1] Length = 460 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 54/384 (14%), Positives = 106/384 (27%), Gaps = 28/384 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP +++ L + G V + A+K + L G S Sbjct: 51 LGTPTWVMSAGTLRARYQRLATAFRATGRPVSIHFAVKANDHLAVLRVLAAQGAGADVVS 110 Query: 60 LYEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--L 114 E+ ++ A+ + I + +L AQ L Sbjct: 111 GGELQRALMAGIPAARIVFSGVGKTMPEMQAALRAGIAQINVESAEELELLSTVAQAEGL 170 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167 + LRINP V ++ G ++ GL H Sbjct: 171 EAPVALRINPDVDAGTHAKITTGLATNKFGIPYNRAVDLYAHAATLPGIRPVGLAMHIGS 230 Query: 168 ENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEF 221 + + + + IE + GGG+ + +D + + Sbjct: 231 QIVRMQPYRTAYARLADLVRAIRARGLHIEALDCGGGLGISYRDETEGAPEALAAAIHGE 290 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVPDYLLYQES 278 ++ +EPG + L +TV+ + + D+++ + L Sbjct: 291 LGGLGTRLAIEPGRWLAGPAGLLLSTVILRKRGYEGMPPFLVLDAAMNDLMRPSLYDAWH 350 Query: 279 ATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 I V G C +GD FG + G R++ D Y + + Sbjct: 351 GIIPLSARDAVAPAEQVHVVGPVCESGDTFGHDRTLPHMDAGARLALLDCGAYGMVMSST 410 Query: 334 FNGINMPTIAVKNVDGTIKAIREF 357 +N + + + Sbjct: 411 YNARPLAAQVMVDGGHWAVIRERQ 434 >gi|145596164|ref|YP_001160461.1| diaminopimelate decarboxylase [Salinispora tropica CNB-440] gi|145305501|gb|ABP56083.1| diaminopimelate decarboxylase [Salinispora tropica CNB-440] Length = 470 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 60/407 (14%), Positives = 123/407 (30%), Gaps = 47/407 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 T YL+D++ L + + A K F + + + S E Sbjct: 62 GTSVYLLDEEDLRSRCRDFRAAFPTED--VYYAGKAFLCRAVARMVAEEGLHLDVCSGGE 119 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + E ++ K A+ II ++ ++++ A++ + + Sbjct: 120 LATALAAGVPPERIGFHGNNKSIAELSRALDVGVGRIIVDSSHEIDRLTALARERGVRPR 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ ++ + GL H + Sbjct: 180 VLVRVTVGVEAHTHEFIATAHEDQKFGFSLAEGAAIAAVLRILDEDVLELRGLHSHIGSQ 239 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKE 220 F +L + Q+ + LGGG +RL++ Sbjct: 240 IFDASGFEVSARRVLALQAQIRDARGVQLPELDLGGGFGIAYTSQDDPATPADLAKRLRK 299 Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDIS-----------ENIKNLVIVD 262 + + +EPG AIV V + + + V VD Sbjct: 300 IVDGECAAERLAVPHLSIEPGRAIVGPAMFTLYEVGTVKSVPVGTGGDAVDGRRCYVSVD 359 Query: 263 SSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDR 317 + ++ L A+ P A V G+ C +GDI + F V+ GD Sbjct: 360 GGMSDNIRTALYDASYSATLASRASVAEPVLARVVGKHCESGDIVVKDEFLPADVQPGDL 419 Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 ++ Y + + +N + P + +R + D Sbjct: 420 VAVPGTGAYCRSMASNYNHVPRPPVVAVRDGRARLIVRRETEEDLLA 466 >gi|229078703|ref|ZP_04211257.1| Diaminopimelate decarboxylase [Bacillus cereus Rock4-2] gi|228704576|gb|EEL57008.1| Diaminopimelate decarboxylase [Bacillus cereus Rock4-2] Length = 438 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIRFALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLVEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVASSDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|157364120|ref|YP_001470887.1| diaminopimelate decarboxylase [Thermotoga lettingae TMO] gi|157314724|gb|ABV33823.1| diaminopimelate decarboxylase [Thermotoga lettingae TMO] Length = 382 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 124/368 (33%), Gaps = 19/368 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D ++ + + + + ++ A+K + TLN + S E Sbjct: 14 GTPLYVYDLPFIIKRITSLKDLFFDLDFRIAYAMKANFNRDLLKTLNNFGLMIDVVSYGE 73 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + F + N D V + +I ++ +L + + I Sbjct: 74 YLHARSIGFAPDRIIVNGNCKKVDQLKTYVNNGVFSINLDSYEELLRLEKI-IDSQTNIS 132 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSF 172 +R+NP V ++ G + +++ + G H + Sbjct: 133 IRVNPDVDAKTHPHISTGLKENKFGVDFDTAAAMIRRIEKNKYLKLIGFHCHIGSQITEI 192 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQI 229 + + ++ +IE ++LGGG K + ++ ++ +K + Sbjct: 193 QPYLEAITSLIDFIEKTGIEIEILNLGGGWGIDYGDGKFLDLNEYRNKILPLLKKTMKTV 252 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI----YPN 284 E G I L + V + + + +V D+ + + L + I + Sbjct: 253 IFELGRWITAPAGYLISKVEYVKKTRYKIFVVVDTGMTHLIRPALYGAKHKIIPLYPSND 312 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 A + G +C + D+ + + G+ I+ DV Y + +N I P + Sbjct: 313 RKMIVADIVGPACESSDVLRKEYKLPEPAEGELITICDVGAYGFAMASEYNLIPKPIEVI 372 Query: 345 KNVDGTIK 352 + + IK Sbjct: 373 WDGEKFIK 380 >gi|268319541|ref|YP_003293197.1| hypothetical protein FI9785_1064 [Lactobacillus johnsonii FI9785] gi|262397916|emb|CAX66930.1| lysA [Lactobacillus johnsonii FI9785] Length = 434 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 66/398 (16%), Positives = 132/398 (33%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ N + + + + A K FA+ M+ N+ T S Sbjct: 30 GTPLVVYDVSQIRNQIRAFKKVFEEEQVNYVVSYASKAFASIAMYQVANEEGAYTDVVSA 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E +++ K E + ++ II + +++ + Q Sbjct: 90 GELYTAMKANFPMERISFHGNNKSKEELEMGVKNHVGKIIIDNFYEIDLLRQVLEEQDSK 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G K + ++++ ++ G+ H Sbjct: 150 INVMLRITPGISAHTHEYDQTGQVDSKFGFDLKSGQADKALQEVLKNKRMHMLGIHAHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK--------DF 214 + F + + + ++ I++GGG Sbjct: 210 SQIFELNGFEMAAAKLVDVAASWKEKYDYTAQIINVGGGFGIKYVQEDHPLKPEEFVKAI 269 Query: 215 CQRLKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + +K+ + K++ I +EPG +IV V + E V VD + ++ Sbjct: 270 VKAIKDEATKHNFPIPEIDIEPGRSIVGPAGYNLYKVGSMKEIPGLVPYVAVDGGMGDNI 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ V G+ C +GDI +K GD ++ D Sbjct: 330 RPALYQAKYETVLANNPQRRASQEFHVAGKYCESGDILA-DAKLPSLKAGDILAMLDTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I+ S D Sbjct: 389 YGYSMASNYNRNPRPAVVFAENGKAQVVIKRESLEDLI 426 >gi|170017508|ref|YP_001728427.1| diaminopimelate decarboxylase [Leuconostoc citreum KM20] gi|169804365|gb|ACA82983.1| Diaminopimelate decarboxylase [Leuconostoc citreum KM20] Length = 433 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 122/391 (31%), Gaps = 33/391 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D K+ + I + V + A K FA ++ Q S Sbjct: 26 GTPLYVYDVTKIRQTMRAFKAIFEKENVPYIVSYASKAFATKAIYQVAQQEGIHADVVSG 85 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + ++N K + + AV T+I + +L + A ++ Sbjct: 86 GELYTAIQAGFNPKHLSFNGNNKSWDELMMAVQQGIGTVIVDNFLELQLLSEIAEKCQVV 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + I LRI+P +S + S+ G + ++ GL H Sbjct: 146 QDILLRISPGISAHTHEFISTGQQDSKFGFDLLTGQAKAAYDIASQDSHFHLRGLHAHIG 205 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRL 218 + F + + Q + I++GGG D + L Sbjct: 206 SQIFDVTGFEKNAALLADTAQSWGWQPDIINVGGGFGIRYTDDDEPLPESDYVSAIIRTL 265 Query: 219 KEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273 K + +Y ++ ++EPG ++V TV + + + ++ L Sbjct: 266 KGKAAEYDWKMPEIWIEPGRSVVGPAGQTLYTVGARKDIPDMRHYIAVDGGMGDNIRPAL 325 Query: 274 LYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + N V G+ C +GD+ + GD +S Y Sbjct: 326 YEANYEAVLANQPNIPAQEVVRVAGKYCESGDVLVWQQKLPKTQAGDILSVLATGAYGYA 385 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 + +N P + + +Y Sbjct: 386 MASNYNRNPRPAVVFVENGQHQLVVARETYE 416 >gi|56963566|ref|YP_175297.1| diaminopimelate decarboxylase [Bacillus clausii KSM-K16] gi|56909809|dbj|BAD64336.1| diaminopimelate decarboxylase [Bacillus clausii KSM-K16] Length = 443 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 125/397 (31%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D + + GV ++ A K F+ M+ S Sbjct: 30 DTPLFVYDTALIKERARAFKQAFEAEGVSYQVAYASKAFSCIAMYQLAASLDLSIDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ ++ K + I+ + +L ++ A + + Sbjct: 90 GELYTALKAGVEPGKIHFHGNNKSHGELEMAIKAGIGCIVADNFYELELLEELAANMEQT 149 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + LR+ P V + S+ G S+ ++ G+ H Sbjct: 150 VSVLLRLTPGVEAHTHEFIATGQEDSKFGFDIASGQADKAAQIAERSKFIDLLGVHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTD-----KDYPVKDFCQR 217 + F ++ + + + + +++ + GGG P + Sbjct: 210 SQIFETEGFVLAIEKVFNQLQAWQEEFDFVPRVLNFGGGFGIRYVEGDKPLEPETYIREI 269 Query: 218 LKEFSEKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVEAHV 269 +KE + +I++EPG ++V + T T+ + + VD + ++ Sbjct: 270 VKETKKHADRLGLAIPEIWIEPGRSLVGDAATTLYTIGSTKDIPNVRRYLSVDGGMSDNL 329 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + T V G+ C +GD+ V+ GD ++ Sbjct: 330 RPALYDAKYEGLLANRAHDKAEETFSVAGKCCESGDMLVWDMPLPEVQHGDVLAMFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + N +N I P + I+ SY D Sbjct: 390 YGYSMANNYNRIPRPAVVFAEDGADQLVIQRESYEDL 426 >gi|258515316|ref|YP_003191538.1| diaminopimelate decarboxylase [Desulfotomaculum acetoxidans DSM 771] gi|257779021|gb|ACV62915.1| diaminopimelate decarboxylase [Desulfotomaculum acetoxidans DSM 771] Length = 447 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 117/398 (29%), Gaps = 36/398 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D++ +N ++ A K + + + S E Sbjct: 31 TPLYVLDEKYFRSNCREYYRAFSDRFNSDVIYASKTLLNTAVCRMIEEEGLCLDIVSGGE 90 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + F ++ K D A+ + I + + +L + A K + Sbjct: 91 LYTALKAGFPASRMYFHGNNKTTDELKLALEAGVGRYIVDNLYELELLNNMAGKANITAD 150 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 I LRI P V + S+ G + + ++G H + Sbjct: 151 ILLRITPGVEAHTHEYIKTGQIDSKFGLAIETGQAMEGTKKALNLANVRLHGFHCHIGSQ 210 Query: 169 NKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF--------CQ 216 F+ + + LGGG+ + Sbjct: 211 IFELESFAHAANIMMSFINNVRTETAFTAAELDLGGGLGIYYFEGDEPKPVKELADIIIN 270 Query: 217 RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 +++ +++Y +I +EPG +I TV + + V + + Sbjct: 271 EVRKQADEYCLPVPKIMVEPGRSISGPAGITLYTVGSVKDIPGIRKYVAVDGGMNDNPRP 330 Query: 272 YLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L N + G+ C +GD+ + P + GD + YN Sbjct: 331 ALYQSRYEAALANKMNEKETELVSIAGKCCESGDMLIKDTKLPPAEPGDVLVVTSTGAYN 390 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 +N I P + + N ++ ++ D N Sbjct: 391 YAMSMNYNRITRPAMILVNEGAAEVIVQRETFEDLIRN 428 >gi|184155330|ref|YP_001843670.1| diaminopimelate decarboxylase [Lactobacillus fermentum IFO 3956] gi|227515201|ref|ZP_03945250.1| diaminopimelate decarboxylase [Lactobacillus fermentum ATCC 14931] gi|260662157|ref|ZP_05863053.1| diaminopimelate decarboxylase [Lactobacillus fermentum 28-3-CHN] gi|183226674|dbj|BAG27190.1| diaminopimelate decarboxylase [Lactobacillus fermentum IFO 3956] gi|227086533|gb|EEI21845.1| diaminopimelate decarboxylase [Lactobacillus fermentum ATCC 14931] gi|260553540|gb|EEX26432.1| diaminopimelate decarboxylase [Lactobacillus fermentum 28-3-CHN] gi|299783176|gb|ADJ41174.1| Diaminopimelate decarboxylase [Lactobacillus fermentum CECT 5716] Length = 439 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 65/396 (16%), Positives = 121/396 (30%), Gaps = 37/396 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP + D + + + + V ++ A K F+A ++ + Q S Sbjct: 31 QTPLVVYDVAAIRHQIRAFKKVFAKNQVAAEVSYASKAFSAIAIYQVVAQEDGHIDVVSG 90 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E +++ K + AV + II + +++ + Q Sbjct: 91 GELTTAIKAHFPMEKVSFHGNNKSKEELELAVQNGVGMIIIDNFHEIDLLGEVLDEQDAT 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LRI P ++ + S+ G + + + + V GL H Sbjct: 151 ATVSLRITPGIAAHTNEYIQTGQVDSKFGFDLESGQADRALEEVLANPRLKVVGLHAHIG 210 Query: 167 CENKSFLCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + + F + K E F Q +++GGG + Sbjct: 211 SQIFEVVGFEGVAKKLVDVAEHWHEEFGFQTRVLNVGGGFGIRYVQEDQPLPPEEFVDAI 270 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 I++EPG +IV TV + V + ++ Sbjct: 271 IKAVKKEVAKKGLSMPAIWIEPGRSIVGPAGYSLYTVGSRKDLPGYQPFVTVDGGMGDNI 330 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L T+Y T + G+ C +GDI K GD + D Sbjct: 331 RPALYQAAYETVYAKDPRQKPEETVRIAGKYCESGDILARDQALPKTKPGDLLVMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 Y + +N P + I+ S+ D Sbjct: 391 YGYAMASNYNRNPRPAVVFVENGHAQLVIQRESWAD 426 >gi|319942204|ref|ZP_08016520.1| diaminopimelate decarboxylase [Sutterella wadsworthensis 3_1_45B] gi|319804257|gb|EFW01149.1| diaminopimelate decarboxylase [Sutterella wadsworthensis 3_1_45B] Length = 467 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 126/391 (32%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A ++ A+K + G+ + L G S E Sbjct: 41 GTPTYVYSRAAITERWNAYETAFGTAPHQICYAVKAASTKGILEVLAALGAGFDCVSGGE 100 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 ++ + ++ K A + + ++L++ + A+ L Sbjct: 101 ILRVLAAGGDPKKIVFSGVAKTPADIAFALTAGIKCFNIESPAELDRIANTARNLGLKAH 160 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I +R+NP++ S+ G K D I K + G+ H + Sbjct: 161 ISVRVNPNIDAHVDHHVATGLGDSKFGVKLTDVIALYQKAAELKEIEIEGISCHIGSLVE 220 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD--------KDYPVKDFCQRLK 219 S + + + ++ + ++ +GGG + +++ Sbjct: 221 STVPYMSEIEVLSVFVNELLDRGIALKHFDIGGGAGVAYKADEKTLEPSELIPAVVAQIR 280 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--DSSVEAHVPDYLLYQE 277 + ++I +EPG +I+ L T V + + D+S+ V + Sbjct: 281 SLVKIPDIEILIEPGRSIIAQAGVLLTRVEYLKSGLFERNFCVVDASMTELVRPAMYGSH 340 Query: 278 SAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + P + G C + DI G V GD ++ Y ++ + Sbjct: 341 HEIEPVSPRSDIEPERLNIVGGVCESSDILGSDRELA-VAPGDLLAIRTAGAYGMSMAST 399 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 +N +P + + R + D + Sbjct: 400 YNSRPLPMEVLVDGAAIRPLRRRMTALDLLS 430 >gi|329767990|ref|ZP_08259501.1| diaminopimelate decarboxylase [Gemella haemolysans M341] gi|328838475|gb|EGF88083.1| diaminopimelate decarboxylase [Gemella haemolysans M341] Length = 430 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 61/399 (15%), Positives = 130/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ L+N T + K++ ++L A K F+ + ++ G SL Sbjct: 29 GTPLYIYDENMLVNQCRTFINNFKSSKFNTEVLFASKAFSCLEVLRIASREGLGVDVVSL 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + + ++ K E TI+ + + + ++ + Sbjct: 89 GEIHTAYKAGYNMKKAYFHGNNKTREELQYALEVGVGTIVIDNDYEYEMINEIVRESGNR 148 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRIN + + S+ G E D N G H Sbjct: 149 VDVLLRINTGIDAHTHEYIKTAKDDSKFGYSVYDETIYELIADINNQSNLNFVGFHSHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD--------F 214 + F +++ +K I ++LGGG + + Sbjct: 209 SQIFEKTSFFEAVKVVMEFTKKVQERLGLTISVLNLGGGFGVYYTEEDRPFELAEFLREY 268 Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + ++ S+ + ++ +EPG ++ N + +V + + V VD + + Sbjct: 269 IEVVERESDNFGLDLTKVVIEPGRSLTCNAGSTLYSVGGVKNTFAGREYVFVDGGMADNP 328 Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N T V G+ C +GD+ + GD + Sbjct: 329 RYALYKAKYEAMLANKMNEEADTTYTVAGKCCESGDMLVMDAKLPKAEQGDLLLVSSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + + + ++ + D Sbjct: 389 YNYSMSSNYNRLPKLPVVFVKDGTSRLVVKGETLEDLIR 427 >gi|227533417|ref|ZP_03963466.1| diaminopimelate decarboxylase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188983|gb|EEI69050.1| diaminopimelate decarboxylase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 448 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D + + + + A V + A K FA M++ S Sbjct: 26 QTPLYVYDVGAIRQQIRAFKRVFEEADVSYAVSYASKAFATIAMYEVAKSEGAHVDVVSG 85 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115 E+ F +++ K A+ + TII + +L+ D A Sbjct: 86 GELYTAQAADFPTAAVSFHGNNKSKAELTQALDAGVGTIIVDNFHELDLLDDLLGATVGQ 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + + +R+ P +S + S+ G E K + + N+ G+ H Sbjct: 146 QDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASGQADEAAKRILADDHLNLLGIHAHIG 205 Query: 167 CENKSFLCFSAMLKNIEK----EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F A+ + + F + +++GGG + Sbjct: 206 SQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVKAI 265 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + I++EPG +IV TV + + V VD + ++ Sbjct: 266 LATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + G+ C +GDI + GD + D Sbjct: 326 RPALYQATYTAVLADQPNAAPAEHVHLVGKYCESGDILIDDAPLPTTTSGDVVVVFDTGA 385 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + + + D N Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDADLIKN 425 >gi|116490819|ref|YP_810363.1| diaminopimelate decarboxylase [Oenococcus oeni PSU-1] gi|290890264|ref|ZP_06553343.1| hypothetical protein AWRIB429_0733 [Oenococcus oeni AWRIB429] gi|116091544|gb|ABJ56698.1| diaminopimelate decarboxylase [Oenococcus oeni PSU-1] gi|290480050|gb|EFD88695.1| hypothetical protein AWRIB429_0733 [Oenococcus oeni AWRIB429] Length = 427 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 131/393 (33%), Gaps = 33/393 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D ++ + + + ++ A K F+ ++D L + + S Sbjct: 23 GTPVYVYDVGQIRSIISDMKEAFDAEKLNYQISYASKAFSTVAIYDVLKHEIIHCDAVSG 82 Query: 61 YEVM-LGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + F + ++N K D + A+ TII + +L+ + +K+ Sbjct: 83 GEIATIAKAGFPMKNVSFNGNNKSADELMMAIDYKIGTIIVDNFHELDLLNEILSERKIS 142 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + + +RI+P +S + S+ G SE N+ GL H Sbjct: 143 QNVLMRISPGISAHTHKFISTGQQDSKFGFDLASGQAKKAFDKIQASEYLNLLGLHAHIG 202 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFS--- 222 + +S ++ + K + Q E I +GGG + + Sbjct: 203 SQIFESSGYSKLVDLLIKTASKWHFQAEIIDVGGGFGIKYTDADDPIPNAEFIHLICQTA 262 Query: 223 -------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273 +I++EPG +IV T+ + VD + ++ L Sbjct: 263 KASSRKYHAKLPEIWVEPGRSIVGPAGYSLYTIGGRKDIPGIRSYLSVDGGMGDNIRPAL 322 Query: 274 LYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 E + + + G+ C +GD+ + GD ++ Y + Sbjct: 323 YQAEYKAVLVDQVDLPSEQVVRIAGKYCESGDVLIQKQELPKTYPGDLLAVLATGAYGYS 382 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + +N P + ++ +Y D Sbjct: 383 MASNYNRNPRPAVVFAEKGKAKLVVKRETYEDI 415 >gi|163791505|ref|ZP_02185911.1| lysA [Carnobacterium sp. AT7] gi|159873228|gb|EDP67326.1| lysA [Carnobacterium sp. AT7] Length = 437 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 60/399 (15%), Positives = 129/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D ++ T +N ++ A K F+ ++ + + S Sbjct: 33 GTPLYVYDVSQIKYKARTFKKAFLDRNIKAQVAYASKAFSCLAIYQLMAKEELSLDVVSG 92 Query: 61 YEVMLGHE--KFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + + H + D EI A+ + + + +L K + + +K Sbjct: 93 GELYTAIQSNYPSKKIHFHGNNKSDAEIVAALDYDIGCFVVDNFYELKKLNEYTAQRKQK 152 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + LR+ P V + S+ G + +E +V GL H Sbjct: 153 MAILLRVTPGVEAHTHEYITTGQTDSKFGFDLDNGQAQQALELALEMPYIDVMGLHCHIG 212 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQ------ 216 + FS + + + + + +++GGG + Sbjct: 213 SQIFETTGFSLAIDKLLIQSKEWQELFGFHLRVLNVGGGFGIRYTAEDEPLPIEDYVNNL 272 Query: 217 -----RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 + + +I++EPG ++V + V + +++N + +D + ++ Sbjct: 273 IDEVQSVSAKVQLPMPEIWIEPGRSLVGDAGITLYQVGSQKVIPDVRNYLAIDGGMTDNI 332 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + T + G+ C +GD+ D ++ Sbjct: 333 RPALYDAKYTGVLANRVEDKVEETYSIAGKCCESGDMLIWDLPLPKADDKDILAVFSTGA 392 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N I P + AI+ SY D Sbjct: 393 YGYAMASNYNRIPRPPVVFVENGKDFLAIKRESYADLMR 431 >gi|58337158|ref|YP_193743.1| diaminopimelate decarboxylase [Lactobacillus acidophilus NCFM] gi|58254475|gb|AAV42712.1| diaminopimelate decarboxylase [Lactobacillus acidophilus NCFM] Length = 435 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 65/398 (16%), Positives = 125/398 (31%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ N + + + GV + A K FA M+ N+ T S Sbjct: 31 GTPLVVYDVNRIRNQIRAFKKVFEEEGVSYAVSYASKAFACIAMYQVANEEGAYTDVVSA 90 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E +++ K + ++ II + ++ + + Sbjct: 91 GELYTALKAGFPAEKISFHGNNKSLAEIEMAVKNHVGKIIIDNFHEIELLDQVLHQYDTQ 150 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 I LRI P +S + S+ G + + + N+ G+ H Sbjct: 151 INVMLRITPGISAHTHEYDQTGQIDSKFGFDLESGQADLALERVLANSRMNMLGIHAHIG 210 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + F +++ E + + I++GGG + Sbjct: 211 SQIFELNGFELAAKKLMEVAENWRSQYGYTAKIINVGGGFGIKYTADDNPLKPEEFVRTI 270 Query: 223 EKY-----------SVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 + + +I +EPG +IV TV + V VD + ++ Sbjct: 271 IETIKKGSADAAFPTPEIDIEPGRSIVGPAGYNLYTVGSCKTIPSYSPYVAVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTGPYTA----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N + G+ C +GDI VK GD ++ D Sbjct: 331 RPALYQAKYDVVLANNPKAPVVNRVRIAGKYCESGDILATES-LPEVKSGDVLAMLDTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + ++ S D Sbjct: 390 YGYSMASNYNRNPRPAVVFAENRKAHLVVKRESLEDLV 427 >gi|73662659|ref|YP_301440.1| diaminopimelate decarboxylase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495174|dbj|BAE18495.1| diaminopimelate decarboxylase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 421 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 65/394 (16%), Positives = 132/394 (33%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D+ ++ N + K +G + A K F M + + S Sbjct: 26 GTPTFVYDEVQIRNQMRRYHEAFKQSGLAYNISYASKAFTCLQMVKLVQEEGLELDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F + ++ K S I+ +++ ++ + A + Sbjct: 86 GELYTALEAGFDPKHIHFHGNNKTKHEIQYALESKVGYIVIDSLEEIVLIERYASEEIDV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G K +++ N+ G+ FH + Sbjct: 146 V-LRLNPGVEAHTHEFIQTGQEDSKFGLSIKHGLAIQGIEKVRDTQKLNLKGVHFHVGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----------- 217 + + +++ I+LGGG + V + Sbjct: 205 IEGTEAMIETANIVINWLKANDIKVDLINLGGGFSIKYVEGDVSFPIEEGIAEITAAIKS 264 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275 + E ++ +I +EPG +IV V I E + V + H+ L Sbjct: 265 IAEDADYPVPEIGIEPGRSIVGEAGITLYEVGTIKEIPQVNKYVSIDGGMSDHIRTALYD 324 Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 + + + T + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYEALLVNRNDPKDETVTIAGKLCESGDIIIKDAQLPSTVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|315038094|ref|YP_004031662.1| diaminopimelate decarboxylase [Lactobacillus amylovorus GRL 1112] gi|325956547|ref|YP_004291959.1| diaminopimelate decarboxylase [Lactobacillus acidophilus 30SC] gi|312276227|gb|ADQ58867.1| diaminopimelate decarboxylase [Lactobacillus amylovorus GRL 1112] gi|325333112|gb|ADZ07020.1| diaminopimelate decarboxylase [Lactobacillus acidophilus 30SC] Length = 436 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 126/398 (31%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D +++ N + + + V + A K FA M+ N+ S Sbjct: 31 GTPLVVYDVEQIRNQIRAFKKVFEKEKVAYAVSYASKAFACIAMYQVANEEGAYIDVVSA 90 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + F E +++ K + ++ II + ++ Q Sbjct: 91 GELYTALKANFPTERISFHGNNKSLFEIEMAVKNHVGKIIIDNFHEIKLLDKVLREQDAK 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G + + + N+ G+ H Sbjct: 151 INVMLRITPGISAHTHEYDQTGQVDSKFGFDLESGQADLALEQVLANSRMNMVGIHAHIG 210 Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + F ++ E + + I++GGG Sbjct: 211 SQIFELNGFEMAAKKLMEVAENWRSQYGYTAKVINVGGGFGIKYTAEDNPLKPEEFVQAI 270 Query: 215 CQRLKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 + +K+ +++ + + +EPG +IV T + + V VD + ++ Sbjct: 271 VETIKKEAKEAAFPVPEIDIEPGRSIVGPAGYNLYTTGSRKVVPGYRPYVTVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ + G+ C +GDI E K G ++ D Sbjct: 331 RPALYGAKYETVLATDPKAPLTEHVRIAGKYCESGDILAEDQALPATKSGSLLAMLDAGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I+ S D Sbjct: 391 YGYSMASNYNRNPRPAVVFVENCKAKLVIKRESLEDLV 428 >gi|70726512|ref|YP_253426.1| diaminopimelate decarboxylase [Staphylococcus haemolyticus JCSC1435] gi|68447236|dbj|BAE04820.1| diaminopimelate decarboxylase [Staphylococcus haemolyticus JCSC1435] Length = 421 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 130/394 (32%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ N + + +G+K + A K F M + + S Sbjct: 26 GTPTIVYDEDEIRNQMRRYHSAFQKSGLKYNISYASKAFTCIQMVKLVQEEDLQLDVVSE 85 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K S + +++ +++ A Sbjct: 86 GELYTALEAKFDPSKIHFHGNNKTKREIQYALESGVGYFVIDSLEEIDLIDRYASDTVNV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G + +S+ ++ G+ FH + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIRHGLAIEAVNKVRDSKRLHLKGIHFHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKE 220 + K + ++E ++LGGG + V + +K Sbjct: 205 IEGTEAMIETAKIVLNWLSENDIKVELLNLGGGFGIKYVEGDVSFPIEEGIAEITDAIKA 264 Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275 +E+ + ++ +EPG +IV V I E + V + H+ L Sbjct: 265 ETERLNYEVPEIGIEPGRSIVGEAGITLYEVGTIKEIPEVNKYVSIDGGMSDHIRTALYG 324 Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 + + T + G+ C +GDI V+ GD ++ Y+ + Sbjct: 325 AKYQALLVNRHEEADETVTIAGKLCESGDIIIRDAKLPSSVQRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P + + I+ S N Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|327183372|gb|AEA31819.1| diaminopimelate decarboxylase [Lactobacillus amylovorus GRL 1118] Length = 436 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 63/398 (15%), Positives = 126/398 (31%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D +++ N + + + V + A K FA M+ N+ T S Sbjct: 31 GTPLVVYDVEQIRNQIRAFKKVFEKEKVAYAVSYASKAFACIAMYQVANEEGAYTDVVSA 90 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E +++ K + ++ II + ++ Q Sbjct: 91 GELYTALKANFPTERISFHGNNKSLFEIEMAVKNHVGKIIIDNFHEIKLLDKVLREQDAK 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G + + + N+ G+ H Sbjct: 151 INVMLRITPGISAHTHEYDQTGQVDSKFGFDLESGQADLALEQVLANSRMNMVGIHAHIG 210 Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + F ++ E + + I++GGG Sbjct: 211 SQIFELNGFEMAAKKLMEVAENWRSQYGYTAKVINVGGGFGIKYTAEDNPLKPEEFVQAI 270 Query: 215 CQRLKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 + +K+ +++ + + +EPG +IV T + + V VD + ++ Sbjct: 271 VETIKKEAKEAAFPVPEIDIEPGRSIVGPAGYNLYTTGSRKVVLGYRPYVTVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ + G+ C +GDI E K G ++ D Sbjct: 331 RPALYGAKYETVLATDPKAPLTEHVRIAGKYCESGDILAEDQALPATKSGSLLAMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I+ S D Sbjct: 391 YGYSMASNYNRNPRPAVVFVENCKAKLVIKRESLEDLV 428 >gi|225428408|ref|XP_002283712.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] Length = 485 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 124/387 (32%), Gaps = 27/387 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ N + + + A+K + + L + G S E+ Sbjct: 94 PFYLYSKPQITRNFEAYKEALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELR 153 Query: 65 LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 L F +N ++ + ++ L+ A+ + L Sbjct: 154 LALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIAGKKVNVLL 213 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172 RINP V S+ G D +++ + G H Sbjct: 214 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 273 Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F + +I ++++GGG+ +D ++E Sbjct: 274 DIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLS 333 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +++ NT L V + N KN V++D S+ + L Sbjct: 334 RDLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELV 393 Query: 284 NTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P T V G C + D G+ G + D Y ++ + +N Sbjct: 394 SPPPSDAQISTFDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASTYNLKM 453 Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364 P DG++ IR ++ D+ Sbjct: 454 RPPEYWVEDDGSMSKIRHGETFEDHVR 480 >gi|82750991|ref|YP_416732.1| diaminopimelate decarboxylase [Staphylococcus aureus RF122] gi|82656522|emb|CAI80944.1| diaminopimelate decarboxylase [Staphylococcus aureus RF122] Length = 421 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 126/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYRALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G + + +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAINNVQQSKYLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKFLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|314936454|ref|ZP_07843801.1| diaminopimelate decarboxylase [Staphylococcus hominis subsp. hominis C80] gi|313655073|gb|EFS18818.1| diaminopimelate decarboxylase [Staphylococcus hominis subsp. hominis C80] Length = 421 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 64/394 (16%), Positives = 127/394 (32%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + ++ ++ N + + +G+K + A K F M + + S Sbjct: 26 GTPTIVYNEDEIRNQMRRFHNAFQKSGLKYNISYASKAFTCIQMVKLVQEENLQLDVVSE 85 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K S + +++ ++ A Sbjct: 86 GELYTALEAKFDPSRIHFHGNNKTKREIQYALESGVGYFVIDSLEEIELIDRYASDTVNV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + +R+NP V + S+ G + S+ ++ G+ FH + Sbjct: 146 V-IRVNPGVEAHTHEFIQTGQEDSKFGLSIRHGLAIQAVEKVKASKHLHLKGIHFHVGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKE 220 + K + Q+E ++LGGG + V + +K Sbjct: 205 IEGTEAMIETAKIVLNWLNEHHIQVELLNLGGGFGIKYVEGDVSFPIEEGIAEITDAIKS 264 Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275 SEK + + +EPG +IV V I + + V + H+ L Sbjct: 265 ESEKLNYDVPEIGIEPGRSIVGEAGITLYEVGTIKDIPEVNKYVSIDGGMSDHIRTALYG 324 Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 + + T + G+ C +GDI VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRHEEADETVTIAGKLCESGDIIIRDAMLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P + + I+ S N Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|118587069|ref|ZP_01544499.1| lysine biosynthesis diaminopimelate decarboxylase [Oenococcus oeni ATCC BAA-1163] gi|118432479|gb|EAV39215.1| lysine biosynthesis diaminopimelate decarboxylase [Oenococcus oeni ATCC BAA-1163] Length = 427 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 130/393 (33%), Gaps = 33/393 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D ++ + + + ++ A K F+ ++D L + + S Sbjct: 23 GTPVYVYDVGQIRSIISDMKEAFDAEKLNYQISYASKAFSTVAIYDVLKHEIIHCDAVSG 82 Query: 61 YEVM-LGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + F + ++N K D A+ TII + +L+ + +K+ Sbjct: 83 GEIATIAKAGFPMKNVSFNGNNKSADELRMAIDYKIGTIIVDNFHELDLLNEILSERKIS 142 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + + +RI+P +S + S+ G SE N+ GL H Sbjct: 143 QNVLMRISPGISAHTHKFISTGQQDSKFGFDLASGQAKKAFDKIQASEYLNLLGLHAHIG 202 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFS--- 222 + +S ++ + K + Q E I +GGG + + Sbjct: 203 SQIFESSGYSKLVDLLIKTASKWHFQAEIIDVGGGFGIKYTDADDPIPNAEFIHLICQTA 262 Query: 223 -------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273 +I++EPG +IV T+ + VD + ++ L Sbjct: 263 KASSRKYHAKLPEIWVEPGRSIVGPAGYSLYTIGGRKDIPGIRSYLSVDGGMGDNIRPAL 322 Query: 274 LYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 E + + + G+ C +GD+ + GD ++ Y + Sbjct: 323 YQAEYKAVLVDQVDLPSEQVVRIAGKYCESGDVLIQKQELPKTYPGDLLAVLATGAYGYS 382 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + +N P + ++ +Y D Sbjct: 383 MASNYNRNPRPAVVFAEKGKAKLVVKRETYEDI 415 >gi|229177926|ref|ZP_04305298.1| Diaminopimelate decarboxylase [Bacillus cereus 172560W] gi|228605414|gb|EEK62863.1| Diaminopimelate decarboxylase [Bacillus cereus 172560W] Length = 438 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLVEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVVASDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|169628525|ref|YP_001702174.1| diaminopimelate decarboxylase [Mycobacterium abscessus ATCC 19977] gi|169240492|emb|CAM61520.1| Probable diaminopimelate decarboxylase [Mycobacterium abscessus] Length = 470 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 60/405 (14%), Positives = 120/405 (29%), Gaps = 44/405 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + A ++ A K F + + G S E Sbjct: 62 GTPLFVIDEDDFRSRCRDMAAAFGGA-ARVHYASKAFLCTEVARWIKDEGLGLDVCSAGE 120 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + +F E A + K AV + I+ +++ ++++ A + + Sbjct: 121 LAVALRAEFPPERIALHGNNKSEAELAQAVQAGVGHIVVDSMIEIDRLDAIAGRAGVVQD 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + ++ + GL H + Sbjct: 181 VLVRVTVGVEAHTHEFISTAHEDQKFGLSLAGGQALEAVRRVFATDNLRLVGLHSHIGSQ 240 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEW--------ISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + + I LGGG+ + + L Sbjct: 241 IFDVDGFEVAAHRVIGLLRDVVAEFGTDKTAQLNIIDLGGGLGISYVPSDDPPPIEDLAA 300 Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDIS-----ENIKNLVIVDSS 264 ++ +EPG AI T V + V VD Sbjct: 301 KLGVIVRTESALAGLPGPRLVIEPGRAIAGPGTVTLYRVGTTKDVILSNGQRRYVSVDGG 360 Query: 265 VEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRIS 319 + ++ L E + P + V G+ C +GDI + V GD ++ Sbjct: 361 MSDNIRTSLYQAEYHPQLVSRDSDVAPVLSRVVGKHCESGDIVVRDAWLPEDVAPGDLLA 420 Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + P + +R + D + Sbjct: 421 VAATGAYCYSMSSRYNLLTRPAVIAVKDGRARLILRRETVEDLVS 465 >gi|90578911|ref|ZP_01234721.1| Diaminopimelate decarboxylase [Vibrio angustum S14] gi|90439744|gb|EAS64925.1| Diaminopimelate decarboxylase [Vibrio angustum S14] Length = 366 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 168/361 (46%), Positives = 241/361 (66%), Gaps = 3/361 (0%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 ID+QKL+NNL+ A +++ +GVKL+LALKCF+ WG+FD + Y+DGTTSS +EV LG E Sbjct: 2 IDEQKLINNLEQAKKLKQLSGVKLVLALKCFSTWGVFDVMKPYLDGTTSSGPFEVRLGAE 61 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 KFGGETHAY+V Y +++ VL +C+ IIFN+VSQL + A +GLR+NP +S Sbjct: 62 KFGGETHAYSVGYSQEDVEEVLEHCNKIIFNSVSQLQAHRHLADGKA-SVGLRLNPGISC 120 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188 + LADP R +SRLG + + +++G MFH NCENKS F A+L +I + FG Sbjct: 121 AGQDLADPARQYSRLGVQENLLTDELFDDLDGAMFHMNCENKSADAFIALLDSISERFGR 180 Query: 189 FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 ++ +++W+SLGGG+ +T DY ++ LK F+ +++VQ+YLEPGEAI+T T L TV Sbjct: 181 YLEKLDWVSLGGGVFYTWPDYELEKLSLALKAFASRFNVQLYLEPGEAIITQTADLVVTV 240 Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAGDIFGEF 306 +DI EN IVDS+ EAH D L+Y E ATI G Y ++ SCLAGD F Sbjct: 241 VDIVENGMKTAIVDSATEAHRLDTLIYNEPATISEASEKGSYQYVIGSCSCLAGDQFCVA 300 Query: 307 HFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 +FE+P+ IG ++ D AGY + + NWFNG+ MP+I + +DG ++ + EF+Y D+ ++L Sbjct: 301 NFEQPLVIGQKLHIADSAGYTMVKLNWFNGLRMPSIYCRRIDGGVEKLNEFTYQDFESSL 360 Query: 367 S 367 S Sbjct: 361 S 361 >gi|227364750|ref|ZP_03848799.1| diaminopimelate decarboxylase [Lactobacillus reuteri MM2-3] gi|325682623|ref|ZP_08162140.1| diaminopimelate decarboxylase [Lactobacillus reuteri MM4-1A] gi|227070209|gb|EEI08583.1| diaminopimelate decarboxylase [Lactobacillus reuteri MM2-3] gi|324978462|gb|EGC15412.1| diaminopimelate decarboxylase [Lactobacillus reuteri MM4-1A] Length = 441 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 70/398 (17%), Positives = 128/398 (32%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D Q++ N + + + V + A K F+A M+ + S Sbjct: 36 GTPLVVYDVQQIRNQIRAFKQVFEENSVDYAVSYASKAFSAIAMYQVVAAEGAHVDVVSG 95 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F +++ K E + + TI+ + ++ D H Sbjct: 96 GELYTAIKAGFPMANVSFHGNNKSREELEMAIDHHVGTIMIDNFHEIELLADVLEEHDAH 155 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G E +E+ + GL H Sbjct: 156 VDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALTKVLENPRMQMKGLHAHIG 215 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + F +++ F Q I++GGG Sbjct: 216 SQIFELAGFEGVAKKLVEVAAHWQEKFNYQAAVINVGGGFGIRYVKDDTPLAPEEFVAAI 275 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + +K ++ I++EPG +I TV + K V VD + ++ Sbjct: 276 IKAIKTEIKETNLAMPAIWIEPGRSIAGPAGYNLYTVGSRKDVPGLKPYVTVDGGMGDNI 335 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ N V G+ C +GDI + K GD ++ D Sbjct: 336 RPALYEAQYETVLANNPRAELVEHVRVAGKYCESGDILSQNQALPATKPGDVLAMLDTGA 395 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I+ +Y+D Sbjct: 396 YGYSMASNYNRNPRPAVVFAEKGTAQVVIKRETYDDLI 433 >gi|148543846|ref|YP_001271216.1| diaminopimelate decarboxylase [Lactobacillus reuteri DSM 20016] gi|184153247|ref|YP_001841588.1| diaminopimelate decarboxylase [Lactobacillus reuteri JCM 1112] gi|148530880|gb|ABQ82879.1| diaminopimelate decarboxylase [Lactobacillus reuteri DSM 20016] gi|183224591|dbj|BAG25108.1| diaminopimelate decarboxylase [Lactobacillus reuteri JCM 1112] Length = 436 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 70/398 (17%), Positives = 128/398 (32%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D Q++ N + + + V + A K F+A M+ + S Sbjct: 31 GTPLVVYDVQQIRNQIRAFKQVFEENSVDYAVSYASKAFSAIAMYQVVAAEGAHVDVVSG 90 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F +++ K E + + TI+ + ++ D H Sbjct: 91 GELYTAIKAGFPMANVSFHGNNKSREELEMAIDHHVGTIMIDNFHEIELLADVLEEHDAH 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G E +E+ + GL H Sbjct: 151 VDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALTKVLENPRMQMKGLHAHIG 210 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + F +++ F Q I++GGG Sbjct: 211 SQIFELAGFEGVAKKLVEVAAHWQEKFNYQAAVINVGGGFGIRYVKDDTPLAPEEFVAAI 270 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + +K ++ I++EPG +I TV + K V VD + ++ Sbjct: 271 IKAIKTEIKETNLAMPAIWIEPGRSIAGPAGYNLYTVGSRKDVPGLKPYVTVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ N V G+ C +GDI + K GD ++ D Sbjct: 331 RPALYEAQYETVLANNPRAELVEHVRVAGKYCESGDILSQNQALPATKPGDVLAMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I+ +Y+D Sbjct: 391 YGYSMASNYNRNPRPAVVFAEKGTAQVVIKRETYDDLI 428 >gi|241888591|ref|ZP_04775898.1| diaminopimelate decarboxylase [Gemella haemolysans ATCC 10379] gi|241864614|gb|EER68989.1| diaminopimelate decarboxylase [Gemella haemolysans ATCC 10379] Length = 430 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 60/399 (15%), Positives = 127/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ L+N T + K++ ++L A K F+ + N+ G SL Sbjct: 29 GTPLYVYDENMLVNQCRTFINNFKSSRFSTEVLFASKAFSCLEVLRIANREGLGVDVVSL 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ + ++ K E TI+ + + ++ Sbjct: 89 GEIHTAYKAGYDMRRAYFHGNNKTREELQYALEVGVGTIVIDNNYEYEMINKIVRESGNT 148 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRIN + + S+ G + D N G H Sbjct: 149 VDVLLRINTGIDAHTHEYIKTAKDDSKFGYSVYDETIYDLIADINNQSNLNFVGFHSHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD--------F 214 + F +++ + I ++LGGG + + Sbjct: 209 SQIFEKTSFFEAVKVVMEFTRRVQERLGLTISVLNLGGGFGVYYTEEDRPFELAEFLREY 268 Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + ++ S+ + ++ +EPG ++ N + +V + + + V VD + + Sbjct: 269 IEVVERESDNFGLDLTKVVIEPGRSLTCNAGSTLYSVGGVKKTFAGREYVFVDGGMADNP 328 Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N T V G+ C +GD+ + GD + Sbjct: 329 RYALYKAKYEAMLANKMNEEADATYTVAGKCCESGDMLVMDAKLPRAEQGDLLLVSSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + + + ++ + D Sbjct: 389 YNYSMSSNYNRLPKLPVVFVKDGTSRLVVKGETLEDLIR 427 >gi|239982304|ref|ZP_04704828.1| putative diaminopimelate decarboxylase [Streptomyces albus J1074] gi|291454149|ref|ZP_06593539.1| diaminopimelate decarboxylase [Streptomyces albus J1074] gi|291357098|gb|EFE84000.1| diaminopimelate decarboxylase [Streptomyces albus J1074] Length = 463 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 121/398 (30%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP + +D+ A + A K F + + L++ S E Sbjct: 63 GTPAFFLDETDFRARCRAWRDAF-GADADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + A++ K AV + I+ ++ ++ + A +L + Sbjct: 122 LATALDAGMPAARIAFHGNNKTTAEIRRAVEAGVGRIVLDSFEEIVRVAHVADELGVRQP 181 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + ++ + + G+ H + Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGLALAGGQAAEAVRRALKLDGLELIGIHSHIGSQ 241 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +++ + + ++ I LGGG+ + + + Sbjct: 242 IFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALGE 301 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG AIV T V + + V VD + ++ Sbjct: 302 IVTRECESAGLATPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E A+ + P V G+ C +GDI F + GD ++ Y Sbjct: 362 ALYDAEYTVTLASRTSDAEPMLVRVVGKHCESGDIVVRDAFLPADLAPGDLLAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVDEGAARVVVRRETEEDLLR 459 >gi|225465560|ref|XP_002275012.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 564 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 125/387 (32%), Gaps = 27/387 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ N + + + A+K + + L + G S E+ Sbjct: 173 PFYLYSKPQIARNFEAYREALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELR 232 Query: 65 LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 L F +N ++ + ++ L+ A+ + L Sbjct: 233 LALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIAGKKVNVLL 292 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172 RINP V S+ G D +++ + G H Sbjct: 293 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 352 Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F + +I ++++GGG+ +D ++E Sbjct: 353 DIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLS 412 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +++ NT L V+ + N KN V++D S+ + L Sbjct: 413 RDLNLIIEPGRSLIANTCCLVNRVIGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELV 472 Query: 284 NTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P T V G C + D G+ G + D Y ++ + +N Sbjct: 473 SPPPSDAQISTFDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASSYNLKM 532 Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364 P DG++ IR ++ D+ Sbjct: 533 RPPEYWVEDDGSVSKIRHGETFEDHVR 559 >gi|57237365|ref|YP_178378.1| diaminopimelate decarboxylase [Campylobacter jejuni RM1221] gi|57166169|gb|AAW34948.1| diaminopimelate decarboxylase [Campylobacter jejuni RM1221] Length = 402 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 57/379 (15%), Positives = 123/379 (32%), Gaps = 22/379 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ + + K ++ A+K + + L G S+ EV Sbjct: 12 TPFYIYNFDFIKECFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71 Query: 64 MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ K + A+ + I + +++ + A++L+ K + Sbjct: 72 KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131 Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168 R+NP+V ++ G + S G+ FH + Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 + ++ + +E +++ +GGG+ + + D+ Q + Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECESDLYDYAQGILAQLHG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I +EPG +V + +VL K V+VD ++ + L I P Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311 Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C +GD F + + GD + ++ Y + + +N N Sbjct: 312 YNQAQESLCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVC 371 Query: 342 IAVKNVDGTIKAIREFSYN 360 + ++ Sbjct: 372 ELALEEGQVRLIRQRENFE 390 >gi|145219513|ref|YP_001130222.1| diaminopimelate decarboxylase [Prosthecochloris vibrioformis DSM 265] gi|145205677|gb|ABP36720.1| diaminopimelate decarboxylase [Chlorobium phaeovibrioides DSM 265] Length = 422 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 60/383 (15%), Positives = 120/383 (31%), Gaps = 23/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ L+ + + ++K + + G +S E Sbjct: 29 GTPLYVTSRRSLVESYREFEAAFASLPHLTCYSVKANFNLNVIREFGELGAGCDVNSGGE 88 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + E K + A S + ++S+L A + + Sbjct: 89 LYRALQAGVPSERIIVAGVGKRPDEIAYALKSGVLLLKVESLSELRAIDRIAGEEGVVAS 148 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170 + LR+NP+V+ + G + + GL H + Sbjct: 149 VALRVNPNVTAETHPYITTGDSKEKFGIDEAELPGIFSLLGSLHNVRLIGLDMHIGSQIF 208 Query: 171 SFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 + A L + F + IE++ +GGG T ++ F ++L + Sbjct: 209 DTEFYVAALTKLLDVFSYARGAGFAIEYLDIGGGFPVTYDPMKPATAIERFAEKLVPMLK 268 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDI--SENIKNLVIVDSSVEAHVPDYLLYQESAT- 280 + ++ LEPG +V N+T L + +L + K +VD+ + + L Sbjct: 269 ETGAKVILEPGRFLVANSTVLLSKILYKKSNHTGKKFFVVDAGMTELIRPALYQSHHEVL 328 Query: 281 -IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + A V G C + D F G ++ Y + +NG Sbjct: 329 SVRQHDQRVVADVVGPVCESSDFFARGREIDDAPEGGLLAVMSCGAYAAVMASNYNGRLR 388 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 P + + R + Sbjct: 389 PAEVMVDGGEPRLMRRRETLEQL 411 >gi|323489651|ref|ZP_08094878.1| diaminopimelate decarboxylase [Planococcus donghaensis MPA1U2] gi|323396782|gb|EGA89601.1| diaminopimelate decarboxylase [Planococcus donghaensis MPA1U2] Length = 440 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 60/399 (15%), Positives = 127/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D Q + + AG ++ A K F+ ++ + S Sbjct: 30 GTPLYVYDIQLFRDRAKAFQETFEKAGIGYQVAYASKAFSTIAIYQVAAEEKLSLDVVSA 89 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K E + I+ + ++ K ++KL + Sbjct: 90 GELYTAVKAGFPVEKIHFHGNNKSMEELQMAFEVGIGCIVVDNFYEIELLKKLSEKLKQP 149 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LR+ P + + S+ G + + N+ GL H Sbjct: 150 MNILLRVTPGIEAHTHDYITTGQEDSKFGFDLKNGQADRAFEQTFDHNYLNLLGLHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWIS----LGGGIHFTDKDYPVK--------DF 214 + F + + ++ + Q + LGGG + Sbjct: 210 SQIFDTGAFQLASEKLMQKMASWKEQFNYTCPVLNLGGGFGIRYTEEDTPLEPAVYVEQM 269 Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + +K+ + I ++EPG +++ + T T+ E VD + ++ Sbjct: 270 IETVKQTANASGYPIPEIWIEPGRSLIGDAGTTLYTIGSTKEVPGTRKYAAVDGGMSDNI 329 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + +++ N + G+ C +GD E V GD + Sbjct: 330 RPALYGAKYSSVIANNANAQLTEQYTIAGKCCESGDKLIEQAELPAVAAGDILGIFCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I P + + ++ + +D Sbjct: 390 YGYSMASNYNRIARPAVVFVENGVSQLVVKRETNDDLIK 428 >gi|224103381|ref|XP_002313033.1| predicted protein [Populus trichocarpa] gi|222849441|gb|EEE86988.1| predicted protein [Populus trichocarpa] Length = 482 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 63/387 (16%), Positives = 124/387 (32%), Gaps = 27/387 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ N++ + + A+K + + L G S E+ Sbjct: 91 PFYLYSKPQITRNVEAYKDALQGLSSIIGYAIKANNNLKILEHLRGLGCGAVLVSGNELR 150 Query: 65 LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 L F +N ++ + ++ L A+ + L Sbjct: 151 LALRAGFDPTRCIFNGNGKLLDDLVLAAQEGVFVNVDSEFDLENIVAAARIAGKKVNVLL 210 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172 RINP V S+ G D +++ + G H Sbjct: 211 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 270 Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F + +++++++GGG+ +D ++E Sbjct: 271 DIFRDAAALMVNYIDEIRAQGFEVDYLNIGGGLGIDYYHSGAVLPTPRDLIDTVRELVLS 330 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +++ NT L V + N KN V++D S+ + L Sbjct: 331 RDLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELV 390 Query: 284 NTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + T V G C + D G+ G + D Y ++ + +N Sbjct: 391 SPASPSAEVSTFDVVGPVCESADFLGKDRELPTPAKGAGLVVHDAGAYCMSMASTYNLKM 450 Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364 P DG++ IR+ ++ D+ Sbjct: 451 RPPEYWVEDDGSVSKIRQGETFEDHIR 477 >gi|315641453|ref|ZP_07896525.1| diaminopimelate decarboxylase [Enterococcus italicus DSM 15952] gi|315482741|gb|EFU73265.1| diaminopimelate decarboxylase [Enterococcus italicus DSM 15952] Length = 430 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 128/400 (32%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALY--IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ + + I+K V++ A K F M + + S Sbjct: 23 GTPLYVFSESMIEQACRELQRDFIQKYERVRVAYASKAFNVLAMLKLVEKEGLCLDVVSG 82 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F E +N K +A+ I +++ +L+ + ++ + Sbjct: 83 GELYTAIAADFEPEKIEFNGNNKSVAELEEALDYGVGRFIIDSMQELDLIQHICREKKQT 142 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 K+ RI P ++ + S+ G K I++ + G+ FH Sbjct: 143 AKVLFRITPEITVQTHRYISTGQKDSKFGIPLDEKVLFPLIKQAIDAPEIDFYGIHFHIG 202 Query: 167 CE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + L +++ F +++ ++ GGG V+ + Sbjct: 203 SQLADNQTHLAAANVALNLVKQIKERFDYEVKELNYGGGFGVRYTKADVRQPYAYFLDPL 262 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + Y I +EPG +IV T+ I + +D + ++ Sbjct: 263 MEATITFCEEHQLYRPTIVIEPGRSIVAEAGITLHTIGSIKQLPGIRTYASIDGGMTDNI 322 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N + G+ C + DI + V GD ++ Sbjct: 323 RPGLYQAQYEVAIANKQTDQDLEPVTISGKICESTDILVKDALLPKVATGDILATYTTGA 382 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N I +P + + ++ SY N Sbjct: 383 YGYSMASNYNKIAIPAVIFVKEGRAEEVVKRQSYQQMIQN 422 >gi|297618779|ref|YP_003706884.1| diaminopimelate decarboxylase [Methanococcus voltae A3] gi|297377756|gb|ADI35911.1| diaminopimelate decarboxylase [Methanococcus voltae A3] Length = 444 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 64/399 (16%), Positives = 126/399 (31%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR----KNAGVKLLL--ALKCFAAWGMFDTLNQYMDGTT 56 TP Y++ + ++ NN + + G +++ A K + LN+ G Sbjct: 38 GTPLYIMSETQIKNNFEKYTQAFNRYTEETGKEVIFSFAYKANTNLAITTLLNKMGCGAD 97 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF----KDKA 111 S E+ + K +N K E + D FN + K Sbjct: 98 VVSSGELYIAKLSKVPSNKIVFNGNCKLVEEIKMGIETDIRAFNVDGISDLILINETAKE 157 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162 + R+NP+V ++ G +D +E E NV G+ Sbjct: 158 MGKIANVSFRVNPNVDPKTHPKISTGLKKNKFGLDIEDGTALKAIKMALEMENVNVVGIH 217 Query: 163 FHNNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219 H + F + + ++ +++GGG+ L Sbjct: 218 CHIGSQLTQIDPFIEEANKLMEFIVSLSEEGIKMRDLNIGGGLGIPYDKNTKIPVQDDLA 277 Query: 220 EFSEKYSVQI---------YLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHV 269 + + +EPG +IV + L + E N +++D+ + + Sbjct: 278 KAVIDTIMTYSDKIELPNLIIEPGRSIVGTSGILVGKTIHRKETKVANWIMIDAGMNDMM 337 Query: 270 PDYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + G C + D+FG+ +++GD ++ DV Y Sbjct: 338 RPAIYEAYHEITPCTIREGTEEVLNIAGGLCESSDVFGKDRKIPTIQVGDYVAVLDVGAY 397 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 I+ N +N P + + N + S +D Sbjct: 398 GISMANNYNSRGKPAMVLTNENEISLIRERESLSDLIAK 436 >gi|325289969|ref|YP_004266150.1| diaminopimelate decarboxylase [Syntrophobotulus glycolicus DSM 8271] gi|324965370|gb|ADY56149.1| diaminopimelate decarboxylase [Syntrophobotulus glycolicus DSM 8271] Length = 417 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 77/393 (19%), Positives = 123/393 (31%), Gaps = 30/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N L N G K A+K + L + G SSL Sbjct: 21 GTPFHLYDEKAIRENARRFLKAFSWNPGFKEYYAVKAAPNPYLLKILAEEGIGADCSSLS 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L GE + E I + +S ++ + + I Sbjct: 81 ELILAEKTGITGENIVFTSNDTPANEFVKAKELGALINLDDISHIDFIHQH-IGMPEMIC 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL 173 R NP S N ++ G + E K + G+ + Sbjct: 140 FRYNPGPLRSGGNAIIGNPEEAKYGVTREQLFECYAKARSLGAKRFGIHTMIISNELNPD 199 Query: 174 CF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 F M + + + IE++ LGGGI + + L K + Sbjct: 200 FFIETARMMFQLVAEIKEKLDINIEFVDLGGGIGIPYRPEDTAVDLEYLGREIHKVYDDM 259 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +E G I L VL E KN + +D+ + + L Sbjct: 260 IAAKHLHPLKLAVECGRMITGPYGYLVAKVLHKKEIYKNYIGLDACMADLMRPALYGSYH 319 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P T V G C D F P+ GD I D + + Sbjct: 320 HLTVPGKQDLPYDQTYDVTGSLCENNDKFAVDRSLPPLDPGDLIIIHDAGAHGHAMGFNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG+I+ IR + +DY+ L Sbjct: 380 NGKLRSQELLLKEDGSIQLIRRAETIDDYFATL 412 >gi|83591736|ref|YP_425488.1| diaminopimelate decarboxylase [Rhodospirillum rubrum ATCC 11170] gi|83574650|gb|ABC21201.1| diaminopimelate decarboxylase [Rhodospirillum rubrum ATCC 11170] Length = 425 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 62/387 (16%), Positives = 112/387 (28%), Gaps = 26/387 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + L A K + L G S Sbjct: 25 VGTPFYVYSAATLERHFRVFSDAFAGQPITLCFATKTNGNKAVLALLAGLGAGADVVSQG 84 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ K A I + +L + AQ L Sbjct: 85 EMEHALAAGVPAGRIVFSGVAKTKAEMAAALEAGIFQINVESEPELEALSEVAQALGKTA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 + LRINP V+ + R ++ G V G+ H + Sbjct: 145 PVALRINPDVAAATHDKIATGRKENKFGIDWTVAPAIFAKAAGLPGIAVKGVAVHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQRLKEF 221 F + + + +E + LGGG+ ++ + Sbjct: 205 LDLDPFRRAFERLRELVLALRADGIALERVDLGGGLGIPYHRDDPASPPPAEYAALARRI 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 V + EPG I N L + V+ + + +I+D+ + + Sbjct: 265 FGDLGVHLVAEPGRLIAGNAGMLVSRVVYRKQGETRTFLILDAGFNDLIRPAMYDAFHDI 324 Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C +GDIF P+ GD ++F Y + + +N Sbjct: 325 LPVTAAAENAVLTPVDVVGPICESGDIFARQRPLPPIAAGDLVAFATAGAYGASMSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDY 362 G + + + D R S + Sbjct: 385 GRPLVPEVMVSGDRFAVVRRRPSVAEM 411 >gi|289550807|ref|YP_003471711.1| Diaminopimelate decarboxylase [Staphylococcus lugdunensis HKU09-01] gi|289180339|gb|ADC87584.1| Diaminopimelate decarboxylase [Staphylococcus lugdunensis HKU09-01] Length = 421 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 59/394 (14%), Positives = 119/394 (30%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + + K +G + A K F M + + S Sbjct: 26 GTPTIVYDEDQIRHQMRRYHSAFKQSGLTYNISYASKAFTCLQMVKLVQEEGLQLDVVSE 85 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F + ++ K + + + + ++ A Sbjct: 86 GELYTALSAGFDPKQIHFHGNNKTKREIQYGLENGIGYFVVDALEEIELIDKYASDTVNV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G K S+ + G+ FH + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIKYGLALEAINKIKASKHLYLKGIHFHVGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----------- 217 + K + Q+E ++LGGG + + Sbjct: 205 IEGTEAMIETAKIVLNWLSEQQIQVELLNLGGGFGIKYVEGDTSFPIEEGIAEITTAIKD 264 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275 + + +I +EPG +IV V I + V + H+ L Sbjct: 265 ITKELNYSVPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSIDGGMSDHIRTALYD 324 Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 + + + T + G+ C +GDI V GD ++ Y+ + Sbjct: 325 AQYEALLVNRHESADETVTISGKLCESGDIIIRNAKLPSSVHRGDILAILSTGAYHYSMS 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|326692740|ref|ZP_08229745.1| diaminopimelate decarboxylase [Leuconostoc argentinum KCTC 3773] Length = 434 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 69/395 (17%), Positives = 123/395 (31%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D K+ + I + V + A K F+ ++ Q S Sbjct: 26 GTPLYVYDVSKIRQTMRAFKAIFEREDVPYVVSYASKAFSTKAIYQVAQQEGIHADIVSG 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++N K + AV + TII + +L + A Q++ Sbjct: 86 GELYTALAAGFPPAHLSFNGNNKSWDELTMAVRAGVGTIIVDNFLELQWLSEIAATQQVQ 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + I LRI+P +S + S+ G + N+ GL H Sbjct: 146 QAILLRISPGISAHTHEFISTGQQDSKFGFDLLTGQAKRAYEIARLDANLNLRGLHAHIG 205 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRL 218 + F + + + I++GGG D L Sbjct: 206 SQIFDVTGFEKNAALLAETAHSWGWTPAVINVGGGFGIRYTDDDTPLPESDYAAAIIATL 265 Query: 219 KEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273 K +E ++ + ++EPG +IV T+ + VD + ++ L Sbjct: 266 KAKAEAFAWPMPEIWIEPGRSIVGPAGQTLYTIGSRKDIPDLRQYLAVDGGMGDNIRPAL 325 Query: 274 LYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + N V G+ C +GD+ K GD +S + Y Sbjct: 326 YQANYDAVLANDPNAPTTEVVRVAGKYCESGDVLVWEQALPQTKPGDILSVQATGAYGYA 385 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + + +Y D Sbjct: 386 MASNYNRNPRPAVVFVENGAHQVIVARETYADIVA 420 >gi|295424953|ref|ZP_06817665.1| diaminopimelate decarboxylase [Lactobacillus amylolyticus DSM 11664] gi|295065392|gb|EFG56288.1| diaminopimelate decarboxylase [Lactobacillus amylolyticus DSM 11664] Length = 437 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 63/399 (15%), Positives = 125/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ + + + + A K FA M+ + T S Sbjct: 31 GTPLIVYDVGQIRQQIRKFKQVFEEEKTSYAVSYASKAFATIAMYQVAAEEGAYTDVVSA 90 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E +++ K + ++ II + ++ K+ Q+ Sbjct: 91 GELYTALKASFPMERVSFHGNNKSRAELEMAVKNHVGKIIIDNFYEIKLLKEVLQENDSH 150 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 I LR+ P +S + S+ G ++ + ++ G+ H Sbjct: 151 IKVMLRLTPGISAHTHEYDQTGQIDSKFGFDLNSGQAAKALQEVLAEPRMDMVGIHAHIG 210 Query: 167 CENKSFLCFSAMLKNIEK----EFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + F + + + + + I++GGG Sbjct: 211 SQIFELNGFEMAAQKLMQVASSWREKYGYTAKIINVGGGFGIKYVSSDHPLKPEAFVKAI 270 Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + +K+ + K I +EPG +IV V + K V VD + ++ Sbjct: 271 VETIKQEAAKNDYPLPEIDIEPGRSIVGPAGYNLYQVGSRKDVPGLKPYVTVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E T+ N + G+ C +GD+ F K GD ++ D Sbjct: 331 RPALYQAEYETVLANNLKAREEEHVRIAGKYCESGDLLSADAFLPKTKPGDILAMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + ++ S D Sbjct: 391 YGYSMASNYNRNPRPAVVFAENGHAQVVVKRESLEDLVR 429 >gi|168214784|ref|ZP_02640409.1| diaminopimelate decarboxylase [Clostridium perfringens CPE str. F4969] gi|182625725|ref|ZP_02953493.1| diaminopimelate decarboxylase [Clostridium perfringens D str. JGS1721] gi|170713766|gb|EDT25948.1| diaminopimelate decarboxylase [Clostridium perfringens CPE str. F4969] gi|177908987|gb|EDT71469.1| diaminopimelate decarboxylase [Clostridium perfringens D str. JGS1721] Length = 431 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 71/400 (17%), Positives = 125/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ + +N K G ++ A K F M + +N+ S Sbjct: 29 GTPLYVIDEELVRSNCRRYYNAMKCEERGNRVTYAGKAFINMSMCNLVNEENLYLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F E ++ K V I + + +L AQ+ Sbjct: 89 GELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ LRI P V + S+ G + K +E E +NGL H Sbjct: 149 QKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTVYDAIKRAMELEYIELNGLHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212 + F + + +I+ + LGGG + Sbjct: 209 SQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLGGGFGIYYTEGDKPKEIEEYCSVI 268 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + +EPG +IV N TV I E V + ++ Sbjct: 269 INKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTVGAIKEIPNIRKYVSVDGGMSDNI 328 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ ++ GD ++ Sbjct: 329 RPALYSANYESLIANRVFDNSKEIVTVAGKCCESGDVLLNSIEMPRMETGDILAIMSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I + + + + +Y D N Sbjct: 389 YGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYEDLLRN 428 >gi|239637088|ref|ZP_04678082.1| diaminopimelate decarboxylase [Staphylococcus warneri L37603] gi|239597438|gb|EEQ79941.1| diaminopimelate decarboxylase [Staphylococcus warneri L37603] Length = 421 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 136/394 (34%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D++++ N + + +G+K + A K F M + + S Sbjct: 26 GTPTIVYDEEQIRNQMRRYHKAFQQSGLKYNISYASKAFTCIQMVKLVQEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K A+ ++ + +++ +++ A + + Sbjct: 86 GELYTALEAGFDPSRIHFHGNNKTKHEIKYALENHIGYFVIDSLEEIDLIDRYASETVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G E ++ ++ G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIRYGLANEAIDKIKQTNHLHLKGVHIHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKE 220 + F K + ++ ++LGGG + V + +K Sbjct: 205 IEGTEAFIETAKIVMNWLNDQQIHVDLLNLGGGFGIKYVEGDVSFPIESSIAEITDAIKN 264 Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +++ +++ +EPG +IV V I E + V + H+ L Sbjct: 265 EAQQLNMETPEIGIEPGRSIVGEAGITLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ T + G+ C +GDI + V+ GD ++ Y+ + Sbjct: 325 AKYQALLVNRQEEADDTVTIAGKLCESGDIIIKNAKLPSSVQRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFIKDGKAREVIKRQSLRQLIIN 418 >gi|151221523|ref|YP_001332345.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. Newman] gi|150374323|dbj|BAF67583.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. Newman] Length = 421 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|20302394|emb|CAB82467.2| diaminopimelate decarboxylase [Staphylococcus aureus] Length = 398 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 3 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 62 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 63 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 122 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G +S+ + G+ H + Sbjct: 123 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 181 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 182 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 241 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 242 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 301 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 302 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 361 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 362 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 395 >gi|15924390|ref|NP_371924.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Mu50] gi|15926980|ref|NP_374513.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus N315] gi|21283017|ref|NP_646105.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MW2] gi|49486241|ref|YP_043462.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MSSA476] gi|57651900|ref|YP_186287.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus COL] gi|87160810|ref|YP_493990.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195127|ref|YP_499928.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267888|ref|YP_001246831.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus JH9] gi|150393951|ref|YP_001316626.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus JH1] gi|156979719|ref|YP_001441978.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Mu3] gi|161509566|ref|YP_001575225.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140627|ref|ZP_03565120.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315275|ref|ZP_04838488.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732037|ref|ZP_04866202.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733353|ref|ZP_04867518.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH130] gi|255006189|ref|ZP_05144790.2| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795545|ref|ZP_05644524.1| diaminopimelate decarboxylase [Staphylococcus aureus A9781] gi|258413353|ref|ZP_05681629.1| diaminopimelate decarboxylase [Staphylococcus aureus A9763] gi|258420540|ref|ZP_05683482.1| diaminopimelate decarboxylase [Staphylococcus aureus A9719] gi|258434688|ref|ZP_05688762.1| diaminopimelate decarboxylase [Staphylococcus aureus A9299] gi|258444736|ref|ZP_05693065.1| diaminopimelate decarboxylase [Staphylococcus aureus A8115] gi|258447429|ref|ZP_05695573.1| diaminopimelate decarboxylase [Staphylococcus aureus A6300] gi|258449270|ref|ZP_05697373.1| diaminopimelate decarboxylase [Staphylococcus aureus A6224] gi|258452193|ref|ZP_05700208.1| diaminopimelate decarboxylase [Staphylococcus aureus A5948] gi|258454650|ref|ZP_05702614.1| diaminopimelate decarboxylase [Staphylococcus aureus A5937] gi|262050355|ref|ZP_06023198.1| diaminopimelate decarboxylase [Staphylococcus aureus D30] gi|262053092|ref|ZP_06025263.1| diaminopimelate decarboxylase [Staphylococcus aureus 930918-3] gi|282892893|ref|ZP_06301128.1| diaminopimelate decarboxylase [Staphylococcus aureus A8117] gi|282927787|ref|ZP_06335400.1| diaminopimelate decarboxylase [Staphylococcus aureus A9765] gi|284024400|ref|ZP_06378798.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 132] gi|294850735|ref|ZP_06791454.1| diaminopimelate decarboxylase [Staphylococcus aureus A9754] gi|295406347|ref|ZP_06816154.1| diaminopimelate decarboxylase [Staphylococcus aureus A8819] gi|296275260|ref|ZP_06857767.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MR1] gi|297244576|ref|ZP_06928459.1| diaminopimelate decarboxylase [Staphylococcus aureus A8796] gi|300912029|ref|ZP_07129472.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH70] gi|304381023|ref|ZP_07363678.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|11991217|gb|AAG42251.1|AF306669_8 diaminopimelate decarboxylase [Staphylococcus aureus] gi|13701197|dbj|BAB42492.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus N315] gi|14247171|dbj|BAB57562.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Mu50] gi|21204456|dbj|BAB95153.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MW2] gi|49244684|emb|CAG43117.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MSSA476] gi|57286086|gb|AAW38180.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus COL] gi|87126784|gb|ABD21298.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202685|gb|ABD30495.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740957|gb|ABQ49255.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus JH9] gi|149946403|gb|ABR52339.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus JH1] gi|156721854|dbj|BAF78271.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Mu3] gi|160368375|gb|ABX29346.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724228|gb|EES92957.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728621|gb|EES97350.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH130] gi|257789517|gb|EEV27857.1| diaminopimelate decarboxylase [Staphylococcus aureus A9781] gi|257839917|gb|EEV64385.1| diaminopimelate decarboxylase [Staphylococcus aureus A9763] gi|257843488|gb|EEV67895.1| diaminopimelate decarboxylase [Staphylococcus aureus A9719] gi|257849049|gb|EEV73031.1| diaminopimelate decarboxylase [Staphylococcus aureus A9299] gi|257850229|gb|EEV74182.1| diaminopimelate decarboxylase [Staphylococcus aureus A8115] gi|257853620|gb|EEV76579.1| diaminopimelate decarboxylase [Staphylococcus aureus A6300] gi|257857258|gb|EEV80156.1| diaminopimelate decarboxylase [Staphylococcus aureus A6224] gi|257860130|gb|EEV82963.1| diaminopimelate decarboxylase [Staphylococcus aureus A5948] gi|257863033|gb|EEV85797.1| diaminopimelate decarboxylase [Staphylococcus aureus A5937] gi|259159015|gb|EEW44088.1| diaminopimelate decarboxylase [Staphylococcus aureus 930918-3] gi|259161554|gb|EEW46153.1| diaminopimelate decarboxylase [Staphylococcus aureus D30] gi|269940895|emb|CBI49278.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TW20] gi|282592041|gb|EFB97069.1| diaminopimelate decarboxylase [Staphylococcus aureus A9765] gi|282764890|gb|EFC05015.1| diaminopimelate decarboxylase [Staphylococcus aureus A8117] gi|285817078|gb|ADC37565.1| Diaminopimelate decarboxylase [Staphylococcus aureus 04-02981] gi|294822411|gb|EFG38861.1| diaminopimelate decarboxylase [Staphylococcus aureus A9754] gi|294968935|gb|EFG44957.1| diaminopimelate decarboxylase [Staphylococcus aureus A8819] gi|297178606|gb|EFH37852.1| diaminopimelate decarboxylase [Staphylococcus aureus A8796] gi|300886275|gb|EFK81477.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH70] gi|302751229|gb|ADL65406.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340439|gb|EFM06378.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312829795|emb|CBX34637.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315131208|gb|EFT87192.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus CGS03] gi|315195912|gb|EFU26277.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus CGS01] gi|320140792|gb|EFW32641.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MRSA131] gi|320142184|gb|EFW34002.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314076|gb|AEB88489.1| Diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus T0131] gi|329725312|gb|EGG61796.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 21189] gi|329727699|gb|EGG64155.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 21172] Length = 421 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|261749392|ref|YP_003257077.1| diaminopimelate decarboxylase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497484|gb|ACX83934.1| diaminopimelate decarboxylase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 409 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 123/386 (31%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D +K+ +++ A K + L + G + S+ Sbjct: 22 GTPLYIYDSRKIERQYIKMKKAFSEVTRLRINYACKANTNLNVLKFLQKLGSGLDTVSIQ 81 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG F + + E+ + I + +S L +F + + IG Sbjct: 82 EVELGLRAGFSPKHIIFTPNCVSLQEVKKAVDFGVKINIDNLSLLEQFGN--ENPDYPIG 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFL 173 +RINP + S+ G K +++ + G H + Sbjct: 140 IRINPHIMAGGNYKISVGHVDSKFGISYYQIPHLKRILKNTGLKIEGFHMHAGSDISDIE 199 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFSEKY 225 F + + I++I G G +K ++ + F + Y Sbjct: 200 AFLQ-GAKVIFQIALDFPDIDYIDFGSGFKVPYTKNDIKTDLTFLSRSIIEKFESFCKVY 258 Query: 226 SVQI--YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++ EPG+ +V+ + + V I + S H + Y+ I Sbjct: 259 GKKVTLIWEPGKFLVSESGSFLVHVNVIKHTTSTVFAGVDSGFNHFIRPMFYEAYHCIEN 318 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + P V G C + D FG ++ GD + ++ Y + + +N Sbjct: 319 ISNPNGRSRFYTVVGYICES-DTFGFNRQIAEIREGDILCIKNAGAYCFSMSSNYNSRYR 377 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P+ + R + D N Sbjct: 378 PSEVMIVKGQDFLIRRRETMQDLLRN 403 >gi|296268863|ref|YP_003651495.1| diaminopimelate decarboxylase [Thermobispora bispora DSM 43833] gi|296091650|gb|ADG87602.1| diaminopimelate decarboxylase [Thermobispora bispora DSM 43833] Length = 465 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 119/398 (29%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D++ + + A K F + ++Q G + E Sbjct: 67 GTPLYIVDEEDFRSRCRDYRSAF--PDGDVHYAGKAFLCREVARWIDQEGLGLDVCTGGE 124 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F E + K AV + I+ ++ ++++ A K Sbjct: 125 LAVALSVGFPPERITMHGNNKSVAELERAVTAGVGRIVIDSFEEIDRLGQIAARYGRRPK 184 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + + + GL H + Sbjct: 185 VLIRVTVGVEAHTHEFIATAHDDQKFGLSLSSGAAAEAVRRVLARPQLELVGLHSHIGSQ 244 Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F + + + + LGGG + + + + + Sbjct: 245 ITDVGGFEVAARRLAGLLVGIRDEHGVVLPELDLGGGYGIPYVEGDEAPDIKVIADGLRE 304 Query: 225 YS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + ++ +EPG +I V + + + V VD + ++ Sbjct: 305 ITTTVCRSAGLPVPRLIVEPGRSIAGIAGITLYEVGTVKDVEGLRTYVSVDGGMSDNIRT 364 Query: 272 YLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L + + P + + G+ C +GD+ + V GD I+ Y Sbjct: 365 ALYGANYTAVVASRESDAAPMLSRLVGKHCESGDMVIRDLWLPSDVVPGDLIAVAGTGAY 424 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + + +R + D Sbjct: 425 CRSLSSNYNYLPRPAVVAVSKGAARVIVRRETEEDLLR 462 >gi|116493670|ref|YP_805404.1| diaminopimelate decarboxylase [Lactobacillus casei ATCC 334] gi|116103820|gb|ABJ68962.1| diaminopimelate decarboxylase [Lactobacillus casei ATCC 334] Length = 448 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D + + + + A V + A K FA M++ S Sbjct: 26 QTPLYVYDIGAIRQQIRAFKRVFEEADVSYAVSYASKAFATIAMYEVAKSEGAHVDVVSG 85 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F +++ K A+ + TII + +L+ D Sbjct: 86 GELYTAQAADFPMAAVSFHGNNKSKAELTQALDAGVGTIIVDNFHELDLLDDLLGDTVGQ 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + + +R+ P +S + S+ G E K + + N+ G+ H Sbjct: 146 QDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASGQADEAAKRILADDHLNLLGIHAHIG 205 Query: 167 CENKSFLCFSAMLKNIEK----EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F A+ + + F + +++GGG + Sbjct: 206 SQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVKAI 265 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + I++EPG +IV TV + + V VD + ++ Sbjct: 266 LATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + G+ C +GDI + GD + D Sbjct: 326 RPALYQATYTAVLADQPNAAPAEHVHLVGKYCESGDILIDDAPLPTTTSGDVVVVFDTGA 385 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + + + D N Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDADLIKN 425 >gi|325968867|ref|YP_004245059.1| diaminopimelate decarboxylase [Vulcanisaeta moutnovskia 768-28] gi|323708070|gb|ADY01557.1| diaminopimelate decarboxylase [Vulcanisaeta moutnovskia 768-28] Length = 401 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 57/377 (15%), Positives = 109/377 (28%), Gaps = 20/377 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP + D ++ N K+L ++K + L + G ++S E Sbjct: 20 GTPLIVYDLGRVEENYRAIRDSI---NAKILYSIKANPNLAILTLLRKLGSGADAASPGE 76 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + L F Y AY+ + N F++ + + + Sbjct: 77 IFLATRAGFEPSNILYTGAYRSLDDIKYGINTGVLFNFDSRREFERALALGYRPRTIF-F 135 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLC 174 R++ S+ G D I++ + G+ Sbjct: 136 RVDLGYGRGFAPGVTLAGEESKFGMFLNDAIDAYSLAKSIGTEEFGIHAMMGSNVLDSDY 195 Query: 175 FSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 F + + + + +I + +GGG + +L + +++ Sbjct: 196 FIRIAELLREHAETIEDRVGIRISYFDMGGGFGIPYRPGEKSLDLSKLSVLRNFFPGELW 255 Query: 231 LEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 +EPG IV N L T V ++ + V VD + + L I Sbjct: 256 VEPGRFIVGNAGYLVTRVTEVKRKGGRTFVGVDVGMNVLIRPMLYGAYHQMITCGNNTEV 315 Query: 290 AMVC---GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 V G C D V+ GD + + Y + + +NG P V Sbjct: 316 TEVVDVVGPICENTDKLAINRELPRVREGDLLIILNAGAYVYSMSSNYNGRPRPAEIVVY 375 Query: 347 VDGTIKAIREFSYNDYY 363 + A + Sbjct: 376 RNEYGIARFREPLDSLV 392 >gi|37519679|ref|NP_923056.1| diaminopimelate decarboxylase [Gloeobacter violaceus PCC 7421] gi|35210670|dbj|BAC88051.1| diaminopimelate decarboxylase [Gloeobacter violaceus PCC 7421] Length = 444 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 55/395 (13%), Positives = 117/395 (29%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ L + K ++L A K ++ + +++ G + S Sbjct: 40 GTPLYILDEATLRAACTQYVEAFKRHYAGDFRVLYASKAWSNLAICAIVHRCGLGIDAVS 99 Query: 60 LYEVMLG-HEKFGGE-THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 EV GE + + + EI T++ + L + + + Sbjct: 100 AGEVHTALRAGVPGELVYLHGNNKSEAEILLAAEVGATVVADNWLDLEILSAISAECPVR 159 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + +R+ P + S+ G + GL H ++ Sbjct: 160 VMVRVAPGIDIHTHEYIRTGHLDSKFGFDPSELAAVLAYLARIPSLRAVGLHAHIGSQSF 219 Query: 171 SFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKD--------FCQRL 218 + + + + + +++GGG+ D CQ + Sbjct: 220 ELAPHGDAAQLLLEWYPKALALGLSDFNELNVGGGLGIRYTDDDDPPAIDEWVGTICQAV 279 Query: 219 KEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273 Y+ ++ EPG ++V TV + + Sbjct: 280 TRTCNTYNLPLPKLLCEPGRSLVGPACATAYTVGSTKTIPSIRKYFSVDGGMSDNPRPIT 339 Query: 274 LYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + N V G+ C +GD+ P++ GD + YN + Sbjct: 340 YKALYTAVVANKMHDGRREKVTVAGKHCESGDVLLRDVELPPLERGDCLVVFSTGAYNCS 399 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N I P + + ++ S +D Sbjct: 400 MASNYNRIPRPAAVLVSDGEATLIVKRESPDDLLR 434 >gi|110800409|ref|YP_695029.1| diaminopimelate decarboxylase [Clostridium perfringens ATCC 13124] gi|168206713|ref|ZP_02632718.1| diaminopimelate decarboxylase [Clostridium perfringens E str. JGS1987] gi|168211701|ref|ZP_02637326.1| diaminopimelate decarboxylase [Clostridium perfringens B str. ATCC 3626] gi|168217954|ref|ZP_02643579.1| diaminopimelate decarboxylase [Clostridium perfringens NCTC 8239] gi|110675056|gb|ABG84043.1| diaminopimelate decarboxylase [Clostridium perfringens ATCC 13124] gi|170661848|gb|EDT14531.1| diaminopimelate decarboxylase [Clostridium perfringens E str. JGS1987] gi|170710345|gb|EDT22527.1| diaminopimelate decarboxylase [Clostridium perfringens B str. ATCC 3626] gi|182379999|gb|EDT77478.1| diaminopimelate decarboxylase [Clostridium perfringens NCTC 8239] Length = 431 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 71/400 (17%), Positives = 125/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ + +N K G ++ A K F M + +N+ S Sbjct: 29 GTPLYVIDEELVRSNCRRYYNAMKCEERGNRVTYAGKAFINMSMCNLVNEENLYLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F E ++ K V I + + +L AQ+ Sbjct: 89 GELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ LRI P V + S+ G + K +E E +NGL H Sbjct: 149 QKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTVYDAIKRAMELEYIELNGLHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212 + F + + +I+ + LGGG + Sbjct: 209 SQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLGGGFGIYYTEGDKPKEIEEYCSVI 268 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + +EPG +IV N TV I E V + ++ Sbjct: 269 INKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTVGAIKEIPNIRKYVSVDGGMSDNI 328 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ ++ GD ++ Sbjct: 329 RPALYSANYESLIANRVFDNSKEIVTVAGKCCESGDVLLNSIEMPRMETGDILAIMSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I + + + + +Y D N Sbjct: 389 YGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYEDLLRN 428 >gi|282929364|ref|ZP_06336929.1| diaminopimelate decarboxylase [Staphylococcus aureus A10102] gi|282589064|gb|EFB94166.1| diaminopimelate decarboxylase [Staphylococcus aureus A10102] Length = 421 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 62/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q++ ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVDLLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|297207945|ref|ZP_06924377.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|296887413|gb|EFH26314.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ATCC 51811] Length = 421 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 125/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + + S+ G +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHVFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|323441184|gb|EGA98891.1| diaminopimelate decarboxylase [Staphylococcus aureus O11] gi|323444053|gb|EGB01664.1| diaminopimelate decarboxylase [Staphylococcus aureus O46] Length = 421 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 125/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ + A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIERYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEKADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|48477088|ref|YP_022794.1| diaminopimelate decarboxylase [Picrophilus torridus DSM 9790] gi|48429736|gb|AAT42601.1| diaminopimelate decarboxylase [Picrophilus torridus DSM 9790] Length = 419 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 122/388 (31%), Gaps = 28/388 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ ++++ NN K+ ALK + + L + G +++ Sbjct: 27 GTPLIVLSEKRINNNYLKIKSAFSKHFRHFKVHYALKANSNPAVISILRRLGAGADAANP 86 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E + + L I F+ V+Q+N K+ +L I Sbjct: 87 NEAEIAMYSGISPDNIIMTGNNLSYNDLKRALEMNIKINFDDVNQMNILKN---ELPDII 143 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172 RINP +F P S+ G + + +N G+ N Sbjct: 144 SFRINPGYGNGEFTGIKTAGPSSKFGIPVNEALNGYRTALNAGVKKFGIHMMAGSNNLDP 203 Query: 173 LCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKY 225 F + ++I +GGG K+ + + + + + Sbjct: 204 GYFYELSGIFAGIIKTINNELGISFDFIDIGGGFGVPYKNEAALDINETARLIAMALDGI 263 Query: 226 SV-----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 +I +EPG +V + TV D+ +++ D + + L Sbjct: 264 MDSNPDAEIIIEPGRYLVADAGIALATVTDLKNYGRSIAGTDLGMNILIRPALYGAVHEI 323 Query: 281 IYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 I N + + G+ C D G ++ GD + + Y + + +N + Sbjct: 324 ICINKNDDKLFNYDITGQICENTDFTGLNVKLPGLEPGDILGIMNAGAYVSSMSSNYNSL 383 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D + D NN Sbjct: 384 SRAAEVLISDDNVHLIKKRDDIRDIINN 411 >gi|301311439|ref|ZP_07217366.1| diaminopimelate decarboxylase [Bacteroides sp. 20_3] gi|300830525|gb|EFK61168.1| diaminopimelate decarboxylase [Bacteroides sp. 20_3] Length = 386 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 71/370 (19%), Positives = 120/370 (32%), Gaps = 25/370 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y D + L + LD G + A+K A + + G S Sbjct: 14 LSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIAANGLGADCVSGG 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK-- 116 EV F + + K + + D FN + +L + A +K Sbjct: 74 EVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELEIINELAATKNKVA 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169 I LRINP V ++ G E + + G+ H + Sbjct: 134 SIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKNVKLIGIHSHIGSQI 193 Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 F I++E +E ++ GGG+ F+ + Sbjct: 194 TDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAIHK 253 Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276 Q++ EPG +IV TL + VL + E K I+D+ + + Y Sbjct: 254 LLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDAYH 313 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 I + T V G C + D+FG+ GD I+ Y + +N Sbjct: 314 RIENISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMASQYNC 373 Query: 337 INMPTIAVKN 346 ++P + Sbjct: 374 RHLPKAYYSD 383 >gi|229069071|ref|ZP_04202363.1| Diaminopimelate decarboxylase [Bacillus cereus F65185] gi|228714016|gb|EEL65899.1| Diaminopimelate decarboxylase [Bacillus cereus F65185] Length = 438 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D++ + K +G ++ A K F M + S Sbjct: 30 GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F ++ K E A+ +N + + +L D A + Sbjct: 90 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P V + S+ G + ++ NV G+ H Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIRFALQKSNYNVLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F ++ + + ++ +++GGG + Sbjct: 210 SQIFETAGFVRAIEVLRQFLVEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269 Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + E +I++EPG +IV + T TV + + V + ++ Sbjct: 270 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V D ++ Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVIASDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I P + + + +Y + N Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429 >gi|330836743|ref|YP_004411384.1| diaminopimelate decarboxylase [Spirochaeta coccoides DSM 17374] gi|329748646|gb|AEC02002.1| diaminopimelate decarboxylase [Spirochaeta coccoides DSM 17374] Length = 422 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 65/394 (16%), Positives = 117/394 (29%), Gaps = 29/394 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+YL D++ L + + G + A+K + L + G SSL Sbjct: 20 LPTPFYLYDEKGLRDTARYFSEMFSWAPGFRNYYAVKACPNPVILKMLAGHGFGADCSSL 79 Query: 61 YEVMLGHE-KFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ L GE + D E I + ++ ++ ++ Sbjct: 80 PELRLSRAAGLSGEKLMFTSNDTADDEFREAYEMGAVINLDDITHIDALLRATDGKVPEL 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--IKNVNGLMFHNNC--------E 168 + N ++ G + + +K + F + Sbjct: 140 ISFRYNPGAERTGNAIIGNPVEAKYGVTTDQIVGAYVRMKELGSKRFALHTMVASNELDG 199 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + +IE+I +GGGI K + E + Sbjct: 200 SYIVETARMLFALCIRLKKEADVRIEFIDMGGGIGIPYKPDQKPMDLGMVSREMEALYNE 259 Query: 229 IYL-----------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 + + E G I L + V ++ K+ V +D+ + + L Sbjct: 260 MIIPAGLAPLGIVFECGRCITGPHGYLVSRVRHVAHKYKDYVGLDACMADLMRPALYGAY 319 Query: 278 SATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 V G C D F PVK GD + D + Sbjct: 320 HHITVLGKEGVPADNVYDVTGSLCENNDKFAIDRRLPPVKPGDVVVIHDAGAHGHAMGFN 379 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +N P + DGT+ IR +Y+DY L Sbjct: 380 YNAKLRPAEYLLKADGTVVMIRRAQTYDDYVATL 413 >gi|283470614|emb|CAQ49825.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ST398] Length = 421 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 125/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G + +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAINKVQQSKHLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|262383506|ref|ZP_06076642.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_33B] gi|262294404|gb|EEY82336.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_33B] Length = 386 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 71/370 (19%), Positives = 120/370 (32%), Gaps = 25/370 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y D + L + LD G + A+K A + + G S Sbjct: 14 LSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIAANGLGADCVSGG 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK-- 116 EV F + + K + + D FN + +L + A +K Sbjct: 74 EVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELEIINELAVAKNKVA 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169 I LRINP V ++ G E + + G+ H + Sbjct: 134 SIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKNVKLIGIHSHIGSQI 193 Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 F I++E +E ++ GGG+ F+ + Sbjct: 194 TDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAIHK 253 Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276 Q++ EPG +IV TL + VL + E K I+D+ + + Y Sbjct: 254 LLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDAYH 313 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 I + T V G C + D+FG+ GD I+ Y + +N Sbjct: 314 RIENISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMASQYNC 373 Query: 337 INMPTIAVKN 346 ++P + Sbjct: 374 RHLPKAYYSD 383 >gi|134102735|ref|YP_001108396.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL 2338] gi|291007808|ref|ZP_06565781.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL 2338] gi|133915358|emb|CAM05471.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL 2338] Length = 472 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 51/406 (12%), Positives = 120/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + + + A K F + + + S E Sbjct: 65 GTPLFVLDEDDFRSRCADYAGAFGDP-ASVHYASKAFLCTEVARWVAEEGLSLDVCSGGE 123 Query: 63 VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + + +F E + K AV + +++ ++ ++ + + A++ + + Sbjct: 124 LNVALRAEFPPERITLHGNNKSVPELTAAVEAGVGSVVLDSFHEIARLEHIARERGVRQD 183 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E +++E + GL H + Sbjct: 184 VMIRVTVGVEAHTHEFIATAHEDQKFGFSLTSGQAAEAVGRVLKAESLRLVGLHSHIGSQ 243 Query: 169 NKSFLCFSAMLKNIEKEFGHF--------ITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + ++ + + LGGG+ L Sbjct: 244 IFDDDGFELAAHRVIRLLAKMQEEHGAEALSTVSTVDLGGGLGIAYTAEDDPLPPAELAA 303 Query: 221 FSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDS 263 + + +EPG AI T V I + + V VD Sbjct: 304 RLNEIVRKECENAGLAAPRIAVEPGRAIAGPGTVTVYEVGTIKDVALDGGLQRRYVSVDG 363 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L + + + G+ C +GD+ + + GD + Sbjct: 364 GMSDNIRTSLYDAVYDCRLVSRRAEARAVLSRIVGKHCESGDVVVRDCWLPEDIAPGDLV 423 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + +N + P + +R + +D Sbjct: 424 AVAATGAYCYVMASNYNRLPKPAVVAVRDGQARLLLRRETEDDLLR 469 >gi|256841336|ref|ZP_05546843.1| diaminopimelate decarboxylase [Parabacteroides sp. D13] gi|256737179|gb|EEU50506.1| diaminopimelate decarboxylase [Parabacteroides sp. D13] Length = 386 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 70/370 (18%), Positives = 119/370 (32%), Gaps = 25/370 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y D + L + LD G + A+K A + + G S Sbjct: 14 LSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIAANGLGADCVSGG 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLHK 116 EV F + + K + + D FN + +L + A + Sbjct: 74 EVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELEIINELAAAKNKVA 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169 I LRINP V ++ G E + + G+ H + Sbjct: 134 SIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKNVKLIGIHSHIGSQI 193 Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 F I++E +E ++ GGG+ F+ + Sbjct: 194 TDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAIHK 253 Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276 Q++ EPG +IV TL + VL + E K I+D+ + + Y Sbjct: 254 LLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDAYH 313 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 I + T V G C + D+FG+ GD I+ Y + +N Sbjct: 314 RIENISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMASQYNC 373 Query: 337 INMPTIAVKN 346 ++P + Sbjct: 374 RHLPKAYYSD 383 >gi|237785874|ref|YP_002906579.1| Diaminopimelate decarboxylase [Corynebacterium kroppenstedtii DSM 44385] gi|237758786|gb|ACR18036.1| Diaminopimelate decarboxylase [Corynebacterium kroppenstedtii DSM 44385] Length = 481 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 64/416 (15%), Positives = 132/416 (31%), Gaps = 55/416 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D+ G + A K F G+ + +S E Sbjct: 62 GTPLMVVDEDDFRARCRAMADAFDGPGH-VHYASKAFLTVGIARWVASEGLCLDVASDGE 120 Query: 63 VMLG-HEKFGGETH-AYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + D AV + I+ ++ ++++ A+ ++ Sbjct: 121 LDVALRAGFPPERITVHGNNKLDSTLTKAVQAGVGHIVIDSRQEVDRLGKIARDAGVRQE 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIK----NVNGLMFHNNCE 168 + +R+ P V + + G KD + + + V GL H + Sbjct: 181 VLIRVTPGVHADTHEFIATSHEDQKFGLSLACGAAKDAVLAAMDYDSLAVAGLHCHVGSQ 240 Query: 169 -------NKSFLCFSAMLKNIEKEFGHFITQ-----------IEWISLGGGIHFTDK--- 207 + + ++ ++ + G + + ++ + LGGG Sbjct: 241 VFDADGFSLAAERLLGLMADLHHQLGRYGSDGGVEKKDVKDSLDILDLGGGYGIAYSASD 300 Query: 208 -DYPVKDFCQRLKEFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLDISENI---- 255 V+ LK K + ++ EPG AI +T TV I + Sbjct: 301 SPLDVRSVADDLKARVHKAAHDLHFDPPTLMVEPGRAIAGPSTVTVYTVGTIKDVPTDER 360 Query: 256 --KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEF-HF 308 + + VD + ++ L + P + G C +GDI E + Sbjct: 361 STRRYLAVDGGMSDNIRPALYNAHYDGRVINRLMHGNPIPTRLVGSHCESGDILVEDGIY 420 Query: 309 EKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 +++GDRI+ Y + + +N P + +R + +D Sbjct: 421 PDDIEVGDRIALAGTGAYCFSMSSRYNMFCRPAVVAVRDGHERVMVRRETIDDLLA 476 >gi|161520274|ref|YP_001583701.1| diaminopimelate decarboxylase [Burkholderia multivorans ATCC 17616] gi|189353549|ref|YP_001949176.1| diaminopimelate decarboxylase [Burkholderia multivorans ATCC 17616] gi|29365470|dbj|BAC66455.1| Diaminopimelate decarboxylase [Burkholderia multivorans] gi|160344324|gb|ABX17409.1| diaminopimelate decarboxylase [Burkholderia multivorans ATCC 17616] gi|189337571|dbj|BAG46640.1| diaminopimelate decarboxylase [Burkholderia multivorans ATCC 17616] Length = 412 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 119/400 (29%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + SL E Sbjct: 16 GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + A Sbjct: 71 IERSLAAGFSPAGEPEGVVFTADLVDRPTLAAVLKHGVTVNAGSLDMLERVGQHA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIALVRQYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + I+ IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVDLVASLGHDIDAISAGGGLSIPYRDGEPRVDVDHYFRQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 ++V+I +EPG +V TL T V ++ K+ + +D+ + + A Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPAMYGSYHA 307 Query: 280 TIYPNT--------GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G C +GD+F + +IGD + D Sbjct: 308 VSVHAHDGALPEGRPQVDIAIAGPLCESGDVFTQDAGGVVTHRKLPQPQIGDLLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407 >gi|191636924|ref|YP_001986090.1| Diaminopimelate decarboxylase [Lactobacillus casei BL23] gi|190711226|emb|CAQ65232.1| Diaminopimelate decarboxylase [Lactobacillus casei BL23] gi|327380949|gb|AEA52425.1| Diaminopimelate decarboxylase [Lactobacillus casei LC2W] gi|327384125|gb|AEA55599.1| Diaminopimelate decarboxylase [Lactobacillus casei BD-II] Length = 448 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D + + + + A V + A K FA M++ S Sbjct: 26 QTPLYVYDVGAICQQIRAFKRVFEEADVSYAVSYASKAFATIAMYEVAKSEGAHVDVVSG 85 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115 E+ F +++ K A+ + TII + +L+ D A Sbjct: 86 GELYTAQAADFPMAAVSFHGNNKSKAELTQALDAGVGTIIVDNFHELDLLDDLLGATVGQ 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + + +R+ P +S + S+ G E K + + N+ G+ H Sbjct: 146 QDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASGQADEAAKRILADDHLNLLGIHAHIG 205 Query: 167 CENKSFLCFSAMLKNIEK----EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F A+ + + F + +++GGG + Sbjct: 206 SQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVKAI 265 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + I++EPG +IV TV + + V VD + ++ Sbjct: 266 LATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + G+ C +GDI + GD + D Sbjct: 326 RPALYQATYTAVLADQPNAAPAEHVHLVGKYCESGDILIDDAPLPTTTPGDVVVVFDTGA 385 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + + + D N Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDADLIKN 425 >gi|88813059|ref|ZP_01128301.1| diaminopimelate decarboxylase [Nitrococcus mobilis Nb-231] gi|88789692|gb|EAR20817.1| diaminopimelate decarboxylase [Nitrococcus mobilis Nb-231] Length = 425 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 57/379 (15%), Positives = 116/379 (30%), Gaps = 25/379 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ + + A+K + + + L + G S E Sbjct: 30 GTPCYVYSRRAIEAAWRVFDDAFAGHDHLICYAVKANSNLAVLNLLARLGSGFDIVSGGE 89 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ + A+ + +L + AQ L+++ Sbjct: 90 LERVLAAGGDPAKVVFSGVAKTEAEMRRALEVGILCFNVESEPELERLAAVAQSLNRRAR 149 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170 LRINP V ++ G + + +V G+ FH + Sbjct: 150 VSLRINPDVDPDTHPYIATGLSENKFGIDIHAVERVYRRAADLPGIDVTGVDFHIGSQLT 209 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224 + L+ + +I + +GGG+ +D + ++L E Sbjct: 210 RIEPITDALERVLALIDRLQGQGIEISHLDVGGGVAIRYRDETPPSIGTYARQLLARLES 269 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLL--YQESATI 281 +++ LEPG AIV N L T V + ++ IVD+++ + L + + Sbjct: 270 RPLRVLLEPGRAIVGNAGVLLTRVEYLKHTAQRHFAIVDAAMNDLLRPALYDAWMAIEAV 329 Query: 282 YPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 P G V G C + D ++ Y + +N Sbjct: 330 VPREGDTPTRRYDVVGPVCESADFLARDRELALAAGD-LLAVRSAGAYGFVMSSNYNSRP 388 Query: 339 MPTIAVKNVDGTIKAIREF 357 P + + + Sbjct: 389 RPAELLADGEVIHLIRERE 407 >gi|224476531|ref|YP_002634137.1| putative diaminopimelate decarboxylase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421138|emb|CAL27952.1| putative diaminopimelate decarboxylase [Staphylococcus carnosus subsp. carnosus TM300] Length = 420 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 125/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ N + +G + A K F M + + S Sbjct: 25 GTPTIVYDEDQIRNQMRRYKEAFDKSGIDYNISYASKAFTCIQMVKLVQEEGLDLDVVSE 84 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E H + EI L N + +++ ++ A + Sbjct: 85 GELYTALEAGYDSSHIHFHGNNKTKHEIQYALENKIGYFVIDSLEEIELINKYASDVVDV 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G K + S+ N+ G+ FH + Sbjct: 145 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLADKAIQNINSSKRLNLKGIHFHIGSQ 203 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----------- 217 + + + +++ +++GGG + V + Sbjct: 204 IEGTDAMIETSNIVIQWLKGLNLEVDLLNIGGGFGIHYVEGDVSFPIETGIKEITYALKD 263 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275 + + ++ I +EPG +IV V I E V + H+ L Sbjct: 264 VAKNNDYPLPTIGIEPGRSIVGEAGVTLYEVGTIKEIPGVNKYVSIDGGMSDHIRTALYG 323 Query: 276 QESATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 + + N T + G+ C +GDI V GD ++ Y+ + Sbjct: 324 AKYDALLVNREEPANDTVTISGKLCESGDIIARDVKLPESVHRGDYLAILSTGAYHYSMA 383 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 384 SNYNQMQKPSVFFIKDGKAREVIKRQSLRQLIIN 417 >gi|88802815|ref|ZP_01118342.1| diaminopimelate decarboxylase [Polaribacter irgensii 23-P] gi|88781673|gb|EAR12851.1| diaminopimelate decarboxylase [Polaribacter irgensii 23-P] Length = 422 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 114/386 (29%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D K+ + +KL A+K + + L G + S+ Sbjct: 22 GSPLYVYDTDKIEAQYNRLTNAFSTVKNLKLNYAVKALSNINILKFLQGIGAGLDTVSIQ 81 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG + + EI+ V I + +S L F K + Sbjct: 82 EVQLGLTTGIDPKKIIFTPNGVSLTEIEEVAKLGVQINIDNLSILELFGQK--HPKIPVC 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173 +RINP + S+ G + N+NG+ H + Sbjct: 140 VRINPHIMAGGNSKISVGHIDSKFGISIHQVPHIKRVVENTGMNINGIHMHTGSDILDID 199 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229 F + I + I++I G G K+ + ++L + Sbjct: 200 TFLRATE-ILFDVAKQFENIDFIDFGSGFKVPYKEGDISTDIEQLGLQLSERFNDFCVEY 258 Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY 282 EPG+ +V+ V + + VDS V + Sbjct: 259 GKEITLMFEPGKFLVSEAGVFLAKVNVVKQTTSTVFAHVDSGFNHLVRPMMYDSYHHITN 318 Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + V G C D FG + D + F + Y + + +N + Sbjct: 319 ISNTEGRDRYYSVVGYICET-DTFGSNRRISEISEEDVLCFHNAGAYCFSMASNYNSRYL 377 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + + + D +N Sbjct: 378 PAEVMVHRGEDYLIRKRQTIQDILHN 403 >gi|307104892|gb|EFN53143.1| hypothetical protein CHLNCDRAFT_58576 [Chlorella variabilis] Length = 889 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 64/382 (16%), Positives = 120/382 (31%), Gaps = 24/382 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P+YL K+K+ N + + + A+K + + L + G S E+ Sbjct: 104 SPFYLYSKEKIRQNYNAYKEALEGLDSIVGYAVKANNNFKIMQCLRELGSGAVLVSGNEL 163 Query: 64 MLGH-EKFGGET-HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119 L F E++ + N I ++ L + A K+ K+ Sbjct: 164 RLAMMAGFDPTRTIFNGNGKLPRELELAVENGVLINVDSEFDLANIQAAAAKVGKRARVL 223 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSF 172 +RINP V S+ G + + G H Sbjct: 224 IRINPDVDPQVHPYVSTGLAGSKFGIRNTHLQWFLDQIKADANLELVGAHCHLGSTITKV 283 Query: 173 LCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F + K+ ++++++GGG+ KD +++ Sbjct: 284 NIFRDATILMVEFIKQIREQGFDLKFLNIGGGLGIDYARKGDVLPTPKDLIDTVRDLVSS 343 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIYP 283 + + +EPG ++V N++ TV + N IV A + L Sbjct: 344 LGLVLVIEPGRSMVANSSAFVNTVTGVKTNGNKNFIVVDGSMAELIRPSLYDAYQHIELT 403 Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T V G C + D G+ GD + D Y ++ + +N P Sbjct: 404 APHASEVQTFDVVGPVCESADFLGKDRVLHTPVAGDGLVVMDAGAYCMSMASNYNMKLAP 463 Query: 341 TIAVKNVDGTIKAIREF-SYND 361 ++ IR + +D Sbjct: 464 EEWWVAERTQLQQIRRSVTLDD 485 >gi|169342342|ref|ZP_02628915.2| diaminopimelate decarboxylase [Clostridium perfringens C str. JGS1495] gi|169299567|gb|EDS81630.1| diaminopimelate decarboxylase [Clostridium perfringens C str. JGS1495] Length = 431 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 71/400 (17%), Positives = 126/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ + +N K G ++ A K F M + +N+ S Sbjct: 29 GTPLYVIDEELVRSNCRRYYNAMKCEERGNRVTYAGKAFINMSMCNLVNEENLYLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F E ++ K V I + + +L AQ+ Sbjct: 89 GELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ LRI P V + S+ G + K +E E +NGL H Sbjct: 149 QKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTVYDAIKRAMELEYIELNGLHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212 + F + + +I+ + LGGG + Sbjct: 209 SQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLGGGFGIYYTEGDKPKEIEEYCSVI 268 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + +EPG +IV N TV I E V + ++ Sbjct: 269 INKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTVGAIKEIPNIRKYVSVDGGMSDNI 328 Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L +I + V G+ C +GD+ ++ GD ++ Sbjct: 329 RPALYSANYESIIANRVFDNSKEIVTVAGKCCESGDVLLNSIEMPRMETGDILAIISTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I + + + + +Y D N Sbjct: 389 YGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYEDLLRN 428 >gi|218289328|ref|ZP_03493562.1| diaminopimelate decarboxylase [Alicyclobacillus acidocaldarius LAA1] gi|218240434|gb|EED07615.1| diaminopimelate decarboxylase [Alicyclobacillus acidocaldarius LAA1] Length = 443 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 54/400 (13%), Positives = 113/400 (28%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP D+ + + + + + GV ++ A K F + +++ G S Sbjct: 40 GTPLIAYDEGLIRDTIRAFHRVFQEEGVPYQISYASKAFCTIAICQLVHEEGLGIDVVSG 99 Query: 61 YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ + H + E++ + +I + +++ D ++ Sbjct: 100 GELYTALAAGVPASKLHMHGNNKTPEELEYAIESGIGAVIVDNFDEIDLLADILEEKGCT 159 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + +R+ P V + S+ G + E V G+ H Sbjct: 160 VDVLVRVAPGVEAHTHDYISTGQQDSKFGFDLASHQVEEAFLRLKQVERARVIGVHAHIG 219 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + F M E F ++LGGG D ++ Sbjct: 220 SQIFDVEGFRLLADRMAGVYEDGLRRFGLPFSVLNLGGGFGIPYTDEDAPPVADLVRGVI 279 Query: 223 EKYS----------VQIYLEPGEAIVTNTTTLNTTVL------DISENIKNLVIVDSSVE 266 +++EPG +IV V + + + + Sbjct: 280 RAAKAAFAARGMDVPVLWIEPGRSIVGPAGVTLYRVGSRKVIPGVRNYVAIDGGMTDNPR 339 Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + A + V G+ C +GD+ + GD ++ Y Sbjct: 340 LALYGAKYHACYANRAADPPDRPWSVAGKCCESGDMLIWDLPLPDPQPGDILAVFATGAY 399 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + +N I P + R ++ D L Sbjct: 400 TYAMASHYNRIPKPAVVFCRDGEARLVARRETWAD-VARL 438 >gi|307327899|ref|ZP_07607081.1| diaminopimelate decarboxylase [Streptomyces violaceusniger Tu 4113] gi|306886417|gb|EFN17421.1| diaminopimelate decarboxylase [Streptomyces violaceusniger Tu 4113] Length = 463 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 61/398 (15%), Positives = 115/398 (28%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D+ + + A K F + + L + S E Sbjct: 63 GTPGYFLDEDDFRARCRSWREAFGE-DADVFYAGKAFLSRAVVRWLTEEGLNLDVCSAGE 121 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 ++ E A + K + I+ ++ ++ + AQ+L K+ Sbjct: 122 LVTALAAGMPAERIALHGNNKSTGEIERAVEAGVGRIVLDSFQEIARVAHIAQRLGKRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 +RI V + G + ++ + + G+ H + Sbjct: 182 VQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGLAAEAVRRALKLDGLELIGIHSHIGSQ 241 Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F + G ++ I LGGG+ + + Sbjct: 242 IFDTSGFEVAAHRVVGLLGEIRDEHGVELPEIDLGGGLGIAYTSGDDPREPHEIAKALRD 301 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG AIV T V + E + V VD + ++ Sbjct: 302 IVHRECDAAGLAVPRLSVEPGRAIVGPTAFTLYEVGTVKELPGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + P + V G+ C +GDI F + GD I+ Y Sbjct: 362 ALYDAEYSVALVSRSSTAEPMLSRVVGKHCESGDIVVRDAFLPADLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVRDGQAREIVRRETEEDLLR 459 >gi|297744419|emb|CBI37681.3| unnamed protein product [Vitis vinifera] Length = 399 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 124/387 (32%), Gaps = 27/387 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ N + + + A+K + + L + G S E+ Sbjct: 8 PFYLYSKPQITRNFEAYKEALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELR 67 Query: 65 LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 L F +N ++ + ++ L+ A+ + L Sbjct: 68 LALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIAGKKVNVLL 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172 RINP V S+ G D +++ + G H Sbjct: 128 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 187 Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F + +I ++++GGG+ +D ++E Sbjct: 188 DIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLS 247 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +++ NT L V + N KN V++D S+ + L Sbjct: 248 RDLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELV 307 Query: 284 NTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P T V G C + D G+ G + D Y ++ + +N Sbjct: 308 SPPPSDAQISTFDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASTYNLKM 367 Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364 P DG++ IR ++ D+ Sbjct: 368 RPPEYWVEDDGSMSKIRHGETFEDHVR 394 >gi|307128625|ref|YP_003880655.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri CARI] gi|306483087|gb|ADM89957.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri CARI] Length = 402 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 63/387 (16%), Positives = 116/387 (29%), Gaps = 27/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D K+ +K+ A K + L + G + S+ Sbjct: 15 GTPLYVYDANKIEYQYKLIKQSFSYIENLKINYACKANTNISILKFLKKLGSGLDTVSIQ 74 Query: 62 EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ +G F + Y EI + I + +S L + + + IG Sbjct: 75 EIEIGLKAGFKPKEIIYTPNSVSLSEIKKAIKAGVRINIDNLSLLEQIGN--DNPNYPIG 132 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFL 173 +RINP + S+ G + V G+ H + Sbjct: 133 IRINPHILGGGNKKISVGHIDSKFGISYYQLPHIKKIVENTGIKVEGIHMHTGSDILDIG 192 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229 F +I F ++++I G G K K L ++ + Sbjct: 193 VFLQ-GADILLNVASFFNELKYIDFGSGFKVPYKKNDTKTDIDMLGVSLKRKFLFFCEKY 251 Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY 282 + EPG+ +V+ + + V I VDS + Sbjct: 252 CKKLKLFFEPGKFLVSESGSFLVKVNVIKHTTSTVFAGVDSGFNHFIRPMFYDSYHHIDN 311 Query: 283 PNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + V G C + D F ++ GD + F + Y + + +N Sbjct: 312 ISNPSGILRFYTVVGYICES-DTFCVNRKINEIREGDLLCFRNAGAYCFSMSSNYNSRYR 370 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNL 366 P+ + + + + D NN+ Sbjct: 371 PSEVIIYNNKDFLIRKRENLQDLLNNM 397 >gi|18309577|ref|NP_561511.1| diaminopimelate decarboxylase [Clostridium perfringens str. 13] gi|18144254|dbj|BAB80301.1| diaminopimelate decarboxylase [Clostridium perfringens str. 13] Length = 466 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 71/400 (17%), Positives = 125/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ + +N K G ++ A K F M + +N+ S Sbjct: 64 GTPLYVIDEELVRSNCRRYYNAMKCEEIGNRVTYAGKAFINMSMCNLVNEENLYLDVVSG 123 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F E ++ K V I + + +L AQ+ Sbjct: 124 GELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRV 183 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ LRI P V + S+ G + K +E E +NGL H Sbjct: 184 QKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTVYDAIKRAMELEYIELNGLHCHIG 243 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212 + F + + +I+ + LGGG + Sbjct: 244 SQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLGGGFGIYYTEGDKPKEIEEYCSVI 303 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + +EPG +IV N TV I E V + ++ Sbjct: 304 INKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTVGAIKEIPNIRKYVSVDGGMSDNI 363 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + V G+ C +GD+ ++ GD ++ Sbjct: 364 RPALYSANYESLIANRVFDNSKEIVTVAGKCCESGDVLLNSIEMPRMETGDILAIMSTGA 423 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I + + + + +Y D N Sbjct: 424 YGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYEDLLRN 463 >gi|300173043|ref|YP_003772209.1| diaminopimelate decarboxylase [Leuconostoc gasicomitatum LMG 18811] gi|299887422|emb|CBL91390.1| diaminopimelate decarboxylase [Leuconostoc gasicomitatum LMG 18811] Length = 431 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 70/395 (17%), Positives = 126/395 (31%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D K+ + I + V + A K FA+ ++ Q S Sbjct: 26 GTPLYVYDVTKIRQTMRDFKAIFEKEDVPYVVSYASKAFASKAIYQVAQQEGIHADIVSG 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F + ++N K + AV TII + +L + + + Sbjct: 86 GELYTALAAGFDPKHLSFNGNNKSWDELTMAVTEGVGTIIVDNFLELQLLSEITTQNGVK 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + I LRI+P +S + S+ G ++E N+ GL H Sbjct: 146 QDILLRISPGISAHTHEFISTGQQDSKFGFDLLTGQAKTAYDIARQNENFNLRGLHAHIG 205 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFS 222 + F + + + Q E I++GGG ++ + Sbjct: 206 SQIFDVTGFEKNAALLAETAKSWGFQPEVINVGGGFGIRYTSEDEPLPESEYADAIIRTL 265 Query: 223 -------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYL 273 + +I++EPG +IV T+ + ++ + VD + ++ L Sbjct: 266 KSKAAEYDWKMPEIWIEPGRSIVGPAGQTLYTIGSRKDIPDLRHYLAVDGGMGDNIRPAL 325 Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 I N + V G+ C +GD+ K GD +S Y Sbjct: 326 YQANYDAILANNPNASTQEVVRVAGKYCESGDVLVWQQALPKTKPGDILSVLATGAYGYA 385 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + I SY Sbjct: 386 MASNYNRNPRPAVVFVENGKHQVVIARESYAHLIA 420 >gi|145525334|ref|XP_001448489.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124416033|emb|CAK81092.1| unnamed protein product [Paramecium tetraurelia] Length = 408 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 66/391 (16%), Positives = 126/391 (32%), Gaps = 34/391 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYM-DGTTSS 58 +P Y+ D++ + T KN+ G K+L A K + + G + Sbjct: 20 GSPLYVYDEEIIKRQCQTITTALKNSFDQGAKVLYACKANTNPNVLKIMKSNGVHGIDAV 79 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLH 115 S EV + F + Y E I + + KA+ + Sbjct: 80 SPNEVEVALQAGFLNNQITFTANYMTKEEIDYAIQKGVILNVGEIDTLKKLIAHKAEVI- 138 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---KDK--IESEIKNVNGLMFHNNCENK 170 +R+N V + S+ G + I+ + + GL H + Sbjct: 139 ----IRLNLDVGIGHHNHVNTGGNDSKFGINLMWKEQLSEIQKQGVKIIGLHQHMGSKIM 194 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFS 222 S +L + + +++I +GGG +DY + +K+ Sbjct: 195 KKDHDSYLLGIEKLFQAATQELELPYLKYIDIGGGFGVKYQDYEETSDLNLLFSEIKKLY 254 Query: 223 EKYS----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLYQE 277 +KY +++EPG ++ + L TV I+ N + S H + L Sbjct: 255 DKYFINVKPMLFIEPGRYLIAESGYLLCTVQAINTNKSRTFVGTDSGMHHLIRPALYESY 314 Query: 278 SATIYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I VCG C +GD+ G V++ D + ++ Y + + + Sbjct: 315 HEIINSEEKQVESRLVTVCGNICESGDLLGVDRNL-KVEVNDVLVIQNGGAYGFSMSSNY 373 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N P + + + + N Sbjct: 374 NLRERPAEILVRDSKPYIIRKRETLDYLLAN 404 >gi|239928902|ref|ZP_04685855.1| diaminopimelate decarboxylase [Streptomyces ghanaensis ATCC 14672] gi|291437228|ref|ZP_06576618.1| diaminopimelate decarboxylase [Streptomyces ghanaensis ATCC 14672] gi|291340123|gb|EFE67079.1| diaminopimelate decarboxylase [Streptomyces ghanaensis ATCC 14672] Length = 463 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 61/398 (15%), Positives = 118/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + + A K F + + L++ S E Sbjct: 63 GTPAYILDEADFRARARAWRTAF-GSDADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + A++ K + I+ ++ ++ + AQ L K+ Sbjct: 122 LATALSAGMPADRIAFHGNNKSPAEIERAVRAGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 +RI V + G + ++ + V G+ H + Sbjct: 182 VQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALQLDGLEVIGIHSHIGSQ 241 Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F + ++ I LGGG+ + + + Sbjct: 242 IFDMSGFEVAAHRVVGLLREIRDEHGIELPEIDLGGGLGIAYTSDDDPREPHEIAKALTE 301 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG AIV T V + + V VD + ++ Sbjct: 302 IVTRECEAARLSTPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E A+ + P V G+ C +GDI F + GD I+ Y Sbjct: 362 ALYDAEYSVALASRSSDAEPMLCRVVGKHCESGDIVVRDAFLPGDLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + + G +R + D Sbjct: 422 CRSMASNYNHVLRPPVVAVDGGGARVIVRRETEEDLLR 459 >gi|89890668|ref|ZP_01202177.1| diaminopimelate decarboxylase [Flavobacteria bacterium BBFL7] gi|89516813|gb|EAS19471.1| diaminopimelate decarboxylase [Flavobacteria bacterium BBFL7] Length = 407 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 64/385 (16%), Positives = 115/385 (29%), Gaps = 27/385 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D ++++ + A +++ A+K + + Q G + SL Sbjct: 14 GSPVYVYDAHRIVSQYERLTSAFAQAKSLRIHYAVKALSNLSILKLFKQLGAGLDTVSLQ 73 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG Y EI+ V + I + +S L +F K + Sbjct: 74 EVQLGLAAGVEPHKIIYTPNGVSLEEIEQVAAMGVQINIDNLSILEQFGSK--HPTIPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCENKSFL 173 +RINP V S+ G VNG+ H + Sbjct: 132 VRINPHVMAGGNANISVGHIDSKFGISIHQIPHLLRIVENTNMTVNGVHMHTGSDILDIG 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230 F + + + F +E+I G G K+ V + L E + + Sbjct: 192 VFLYATEILFETAAKF-KDLEFIDFGSGFKVPYKEGDVSTDIEDLGEQLSERFNKFCKDY 250 Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY 282 EPG+ +V+ V + + +DS + L Sbjct: 251 GRDITLAFEPGKFLVSEAGYFLAKVNVVKQTTSTVFAGIDSGFNHLIRPMLYGSYHGIKN 310 Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + V G C D F + + GD ++F + Y + + +N Sbjct: 311 ISNETGRNRFYSVVGYICET-DTFAQNRQISEITEGDILAFANAGAYCYSMTSNYNSRYR 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P + + D Sbjct: 370 PAEVLWYNGEAHLIRERETMEDILK 394 >gi|255014433|ref|ZP_05286559.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_7] Length = 386 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 70/370 (18%), Positives = 119/370 (32%), Gaps = 25/370 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y D + L + LD G + A+K A + + G S Sbjct: 14 LSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIATNGLGADCVSGG 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLHK 116 EV F + + K + + D FN + +L + A + Sbjct: 74 EVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELEIINELAAAKNKVA 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169 I LRINP V ++ G E + + G+ H + Sbjct: 134 SIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKHVKLIGIHSHIGSQI 193 Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 F I++E +E ++ GGG+ F+ + Sbjct: 194 TDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAIHK 253 Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276 Q++ EPG +IV TL + VL + E K I+D+ + + Y Sbjct: 254 LLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDAYH 313 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 I + T V G C + D+FG+ GD I+ Y + +N Sbjct: 314 RIENISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMASQYNC 373 Query: 337 INMPTIAVKN 346 ++P + Sbjct: 374 RHLPKAYYSD 383 >gi|262277926|ref|ZP_06055719.1| diaminopimelate decarboxylase [alpha proteobacterium HIMB114] gi|262225029|gb|EEY75488.1| diaminopimelate decarboxylase [alpha proteobacterium HIMB114] Length = 410 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 63/385 (16%), Positives = 133/385 (34%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+Y+ ++ N+ K + + A+K + + L + G S E Sbjct: 26 KTPFYIYSADQIKKNIKLVQSSLKKSNPLICYAVKANSNIQVIRELKKNNVGADVVSAGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + L + ++ K + I + S++ ++KL+K K Sbjct: 86 LKLALKAGISPKKIVFSGVGKTEDEIKFAIQKGILSINAESESEILSINKISKKLNKIVK 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 IG+RINP + ++ G D + + ++ L H + K Sbjct: 146 IGIRINPDIKAKTNKKIATGTKVNKFGVSISDFFQILNSKKNLKNIKIHLLSVHIGSQIK 205 Query: 171 SFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + +LK I K +++++ LGGG+ K++ K F + + +F + Sbjct: 206 DIGAYKKVLKLISKLLLKLGKTNHEVDYVDLGGGMGIPYFKGDKNFDFKKFGKEVAKFYK 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 K V+I E G + N + + V+ + + + I+ + + +Y+ I P Sbjct: 266 KQKVKIIFEIGRFLTGNAGIIISKVIYVKKTREKYFIIIDTGMNDMARSAIYEAFHEILP 325 Query: 284 NT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 G C + D FG + +K D + + Y + +N Sbjct: 326 IEKNFKKFNKKIEFVGPICESSDTFGIYKNYSILKEEDLVCITNCGAYGRTLSSNYNMRP 385 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYY 363 + + + + + Sbjct: 386 LIEEIIVDKKKLKSVRKRQKIENIV 410 >gi|194468402|ref|ZP_03074388.1| diaminopimelate decarboxylase [Lactobacillus reuteri 100-23] gi|194453255|gb|EDX42153.1| diaminopimelate decarboxylase [Lactobacillus reuteri 100-23] Length = 436 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 69/398 (17%), Positives = 128/398 (32%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D Q++ + + + + V + A K F+A M+ + S Sbjct: 31 GTPLVVYDVQQIRHQIRAFKQVFEENSVDYAVSYASKAFSAIAMYQVVAVEGAHVDVVSG 90 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F +++ K E + + TI+ + ++ D H Sbjct: 91 GELYTAIKAGFPMANVSFHGNNKSREELEMAIDHHVGTIMIDNFHEIELLADVLEEHDAH 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G E +E+ + GL H Sbjct: 151 VDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALTKVLENPRMQMKGLHAHIG 210 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + F +++ F Q I++GGG Sbjct: 211 SQIFELAGFEGVAKKLVEVAAHWQEKFNYQAAVINVGGGFGIRYVKDDTPLAPEEFVAAI 270 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + +K ++ I++EPG +I TV + K V VD + ++ Sbjct: 271 IKAIKTEIKETNLAMPAIWIEPGRSIAGPAGYNLYTVGSRKDVPGLKPYVTVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ N V G+ C +GDI + K GD ++ D Sbjct: 331 RPALYEAQYETVLANNPRAEVVEHVRVAGKYCESGDILSQNQALPATKPGDVLAMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I+ +Y+D Sbjct: 391 YGYSMASNYNRNPRPAVVFAEKGTAQVVIKRETYDDLI 428 >gi|313899022|ref|ZP_07832549.1| diaminopimelate decarboxylase [Clostridium sp. HGF2] gi|312956221|gb|EFR37862.1| diaminopimelate decarboxylase [Clostridium sp. HGF2] Length = 457 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 57/397 (14%), Positives = 118/397 (29%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ K+ + + +N ++L A K F+ + + S Sbjct: 50 GTPLYVYDENKITQKMSQFHELFQSENFDTEVLYASKAFSCKAIVQMAAIHGLCLDVVSG 109 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + F E ++ K + + + I+ + + AQ++ Sbjct: 110 GELYTAMQSGFPMEKIYFHGNNKTWDELIMALEAGVGCIVVDNAMECELLVKAAQRVGTT 169 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+NP V S+ G G H Sbjct: 170 VRTLIRVNPGVEAHTHKYIVTAHLDSKFGISISRMEDIRDMIQTLTSIPNIAFEGFHSHI 229 Query: 166 NCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--- 218 + ++K ++ + + ++LGGG Q + Sbjct: 230 GSQIFDKDAYVAEIQTLMKFVDDMQKAYGITTKALNLGGGFAAYYTSEDHPIPLQEVCQT 289 Query: 219 -----KEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHV 269 K ++Y ++ +EPG +IV + + + I D + ++ Sbjct: 290 ILDTCKWERDRYQLPLEKLMIEPGRSIVAEAGSTLYRIGYQKQTENKKYIFVDGGMSDNI 349 Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A T V G+ C +GDI E + D + Sbjct: 350 RPALYQAAYACDIANRMDEEKSETVTVAGKCCESGDILVENVRLPRAQTNDLLILYTTGA 409 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N + P + ++ +Y D Sbjct: 410 YGYSMASNYNRLGRPAVVFVKDGKVRFVVKRETYEDM 446 >gi|168064981|ref|XP_001784435.1| predicted protein [Physcomitrella patens subsp. patens] gi|162664006|gb|EDQ50742.1| predicted protein [Physcomitrella patens subsp. patens] Length = 414 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 71/389 (18%), Positives = 130/389 (33%), Gaps = 29/389 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K++L N + K + A+K + L + G S E+ Sbjct: 21 PFYLYSKRQLRRNYEAYQEALKGLNSIIGYAVKANNNLKIMRCLRELGSGAVLVSGTELR 80 Query: 65 LGHE--KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIG 119 L E F +N E++ I ++ L + + ++ K+ Sbjct: 81 LAVEHTGFDPARCVFNGNGKLLEELELAAQYGVLINVDSEFDLAQIIEASRNTGKRIKVL 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCENKS 171 LRINP V S+ G + + SE + G+ H Sbjct: 141 LRINPDVDPQVHPYVATGNKNSKFGIRNEKLGWFLEEVKKHSENLELVGVHCHLGSTITK 200 Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSE 223 F ++ + K+ I+++++GGG+ D +++ Sbjct: 201 VDVFRDAAVVMVDFVKKIRGENFTIKYLNIGGGLGIDYYHKGAILPTPTDLIDTVRDLVT 260 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282 K + + +EPG ++V NT+ + V + N K+ +++D S+ + L + Sbjct: 261 KEGLTLIIEPGRSLVANTSAFVSHVTGVKTNGTKDFIVIDGSMSELIRPSLYGAYQHIEF 320 Query: 283 PNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T V G C + D G+ K GD I D Y + + +N Sbjct: 321 VAPPAEGAEVKTFDVVGPVCESADFLGKERELPTPKRGDGIVVHDAGAYCMAMASTYNLR 380 Query: 338 NMPTIAVKNVDGTI--KAIREFSYNDYYN 364 P DG K +D+ Sbjct: 381 MRPPEYWVADDGKTVEKIRHAEQLDDHIR 409 >gi|255636652|gb|ACU18663.1| unknown [Glycine max] Length = 488 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 62/387 (16%), Positives = 127/387 (32%), Gaps = 27/387 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ N++ + + A+K + + L G S E+ Sbjct: 97 PFYLYSKPQITRNVEAYKDALEGLSSIIGYAIKANNNLKILEHLRHLGCGAVLVSGNELR 156 Query: 65 LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 L F +N ++ + ++ L + A++ + L Sbjct: 157 LALRAGFDPTRCIFNGNGKILEDLVLAAQEGVFVNIDSEFDLENITEAAKRAGKKVNVLL 216 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172 RINP V S+ G D ++ + G H Sbjct: 217 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKELPNELKLVGAHCHLGSTITKV 276 Query: 173 LCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F ++ N + +++++++GGG+ +D +++ Sbjct: 277 DIFRDAATIMINYIDQIRDQGFEVDYLNIGGGLGIDYYHSGAILPTPRDLIDTVRDLVIS 336 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +++ NT L V + KN +++D S+ + L Sbjct: 337 RGLNLIIEPGRSLIANTCCLVNRVTGVKSNGSKNFIVIDGSMAELIRPSLYDAYQHIELV 396 Query: 284 NTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P T V G C + D G+ G + D Y ++ + +N Sbjct: 397 SPAPSNAETTTFDVVGPVCESADFLGKGRELPTPAKGTGLVVHDAGAYCMSMASTYNLKM 456 Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364 P DG++ IR ++ D+ Sbjct: 457 RPPEYWVEDDGSVSKIRHGETFEDHIR 483 >gi|302333012|gb|ADL23205.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus JKD6159] Length = 421 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 60/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K +G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKESGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K + + +++ +++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENKIGYFVIDSLEEIDLIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+NP V + S+ G + ++S+ + G+ H + Sbjct: 146 V-IRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKTAIEKVLQSKHLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + Q++ ++LGGG + ++ + Sbjct: 205 IEGTEAFIETAKIVLHWLKEHNIQVDLLNLGGGFGIKYVEGDESFPIEKGIKEITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E V + H+ L Sbjct: 265 EVQLLGIETPELGIEPGRSIVGEAGVTLYEVGTIKEIPGVNKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ T + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEDSDDTVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMS 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + ++ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVVKRQSLRQLIIN 418 >gi|227889926|ref|ZP_04007731.1| diaminopimelate decarboxylase [Lactobacillus johnsonii ATCC 33200] gi|227849370|gb|EEJ59456.1| diaminopimelate decarboxylase [Lactobacillus johnsonii ATCC 33200] Length = 434 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 66/398 (16%), Positives = 130/398 (32%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ N + + + + A K FA+ M+ N+ T S Sbjct: 30 GTPLVVYDVSQIRNQIRAFKKVFEEEQLNYAVSYASKAFASIAMYQVANEEGAYTDVVSA 89 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + F E +++ K E + ++ I+ + ++N Q Sbjct: 90 GELYTAMKANFPMERVSFHGNNKSKEELEMAVKNHVGKIMIDNFYEINLLNQVLEEQDSE 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LRI +S + S+ G K + ++++ ++ G+ H Sbjct: 150 INVMLRITLGISAHTHEYDQTGQVDSKFGFDLKSGQADKALQEVLKNQRMHMLGIHAHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK--------DF 214 + F + + ++ I++GGG Sbjct: 210 SQIFELNGFEMAAAKLVDVAASWRKNYDYTAQVINVGGGFGIKYVQEDHPLKPEEFVKAI 269 Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + +K+ + K++ I +EPG +IV V + E V VD + ++ Sbjct: 270 VKTIKDEATKHNFPLPEIDIEPGRSIVGPAGYNLYKVGSMKEIPGLVPYVAVDGGMGDNI 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ V G+ C +GDI +K GD ++ D Sbjct: 330 RPALYQAKYETVLANDPQRKASQEFHVAGKYCESGDILA-DAKLPSLKAGDILAMLDTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + IR S D Sbjct: 389 YGYSMASNYNRNPRPAVVFAEDGKAQVVIRRESLEDLV 426 >gi|154249122|ref|YP_001409947.1| diaminopimelate decarboxylase [Fervidobacterium nodosum Rt17-B1] gi|154153058|gb|ABS60290.1| diaminopimelate decarboxylase [Fervidobacterium nodosum Rt17-B1] Length = 393 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 52/377 (13%), Positives = 120/377 (31%), Gaps = 20/377 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++++L + T + + + A K + + G S+ E Sbjct: 19 GTPVYVYSREEILKRISTVKDVFSSVNLFPTFACKANNNPRIIEMFKDNGFGADIVSIGE 78 Query: 63 VMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + +N EI+ + + ++ + + + + L Sbjct: 79 YHACKLADVDDKKIVWNGNGKTRKEIEILSKKVGYVNIDSEEEYEIWSEI--DSSAEFFL 136 Query: 121 RINPSVSYSKFILADPNRPFSRLGE---KCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 R+NP V S+ G + + + N++G H + F Sbjct: 137 RVNPDVDAKTHPHISTGLKKSKFGIQTDEIDRILSKKRLNISGFHVHIGSQITDVEPFEE 196 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + + + I++GGG KD + ++ +R+ + + + + + LE G Sbjct: 197 AISKVVDLSKKYG--FSKINIGGGWGIKYKDKELDILEYKERIVPYLKDFKM-VILELGR 253 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA-TIYPNTGPYTAMV- 292 ++ L V + + +V D + + + + ++ Sbjct: 254 YMIAPAGLLVLKVEYVKKTRHKTFVVLDGGMNVLMRPAMYNAYHEVNVLDPESSEKYIID 313 Query: 293 -CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG-- 349 G C +GDI + K+G + DV Y + N +N + P + + Sbjct: 314 VVGPLCESGDIIAFERNLEIPKVGSYVIVRDVGAYGYSMSNNYNSMPRPAEVIVYEENGK 373 Query: 350 --TIKAIREFSYNDYYN 364 R + + Sbjct: 374 YDFRLIRRREEIEEMFK 390 >gi|258423663|ref|ZP_05686551.1| diaminopimelate decarboxylase [Staphylococcus aureus A9635] gi|257846161|gb|EEV70187.1| diaminopimelate decarboxylase [Staphylococcus aureus A9635] Length = 421 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 61/394 (15%), Positives = 129/394 (32%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + + K +G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHHAFKESGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K + + +++ +++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENKIGYFVIDSLEEIDLIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+NP V + S+ G + ++S+ + G+ H + Sbjct: 146 V-IRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKTAIEKVLQSKHLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLK- 219 + F K + Q++ ++LGGG + + +K Sbjct: 205 IEGTEAFIETAKIVLHWLKEHNIQVDLLNLGGGFGIKYVEGDESFPIEKGIKEITDAIKS 264 Query: 220 --EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 + + ++ +EPG +IV V I E V + H+ L Sbjct: 265 EVQLLDIEPPELGIEPGRSIVGEAGVTLYEVGTIKEIPGVNKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ T + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEDSDDTVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + ++ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVVKRQSLRQLIIN 418 >gi|57242052|ref|ZP_00369992.1| diaminopimelate decarboxylase [Campylobacter upsaliensis RM3195] gi|57017244|gb|EAL54025.1| diaminopimelate decarboxylase [Campylobacter upsaliensis RM3195] Length = 402 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 63/383 (16%), Positives = 126/383 (32%), Gaps = 21/383 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D + + K ++ A+K + + L + G S+ E Sbjct: 11 KTPFYLYDFDLIKSRFLELKSAFKARKSQIFYAMKANSNLSLLQMLARLDSGFDCVSIGE 70 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ----KLHKK 117 V ++ K E D + N S+ ++ L + Sbjct: 71 VKRALRVGVKPYKIIFSGVGKSEEELKQALKFDILYINLESEEEMLLLESVAKKLDLKAR 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCE-- 168 I +R+NP+V ++ G + + + + G+ FH + Sbjct: 131 ISIRVNPNVDAKTHPYISTGLNENKFGVELEVARKMYLYAAKSEFLEPVGVHFHIGSQLL 190 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEK 224 + ++ + +E ++++ +GGG+ K+ + D+ Q + Sbjct: 191 DISPIHDAALIVAKLLRELKALKIELKFFDVGGGLGVGYEGEKEPCLYDYAQGILANLSG 250 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283 V I LEPG +V + L +VL K ++ D+++ + L + P Sbjct: 251 LDVTIGLEPGRFLVAKSGVLVCSVLYEKITPKKRFMIVDAAMNDLIRPSLYDAYHEIVLP 310 Query: 284 NTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T V G C +GD F + K GD + ++ Y + + +N Sbjct: 311 YTKGEVSPCDVVGGICESGDFFAKDRKLAKSKSGDIVLIKEAGAYGFSMSSNYNTRPRIC 370 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + + D Sbjct: 371 ELALENGAVKMVRKREKFEDLIA 393 >gi|221209571|ref|ZP_03582552.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD1] gi|221170259|gb|EEE02725.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD1] Length = 412 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 119/400 (29%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + SL E Sbjct: 16 GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + A Sbjct: 71 IERSLAAGFSPAGEPEGVVFTADLVDRPTLAAVLKHGVTVNAGSLDMLERVGQHA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIALVRQYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + I+ IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVDHYFRQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 ++V+I +EPG +V TL T V ++ K+ + +D+ + + A Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPAMYGSYHA 307 Query: 280 TIYPNT--------GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G C +GD+F + +IGD + D Sbjct: 308 VSVHAHDGALPEGRPQVDIAIAGPLCESGDVFTQDAGGVVTHRKLPQPQIGDLLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407 >gi|182412489|ref|YP_001817555.1| diaminopimelate decarboxylase [Opitutus terrae PB90-1] gi|177839703|gb|ACB73955.1| diaminopimelate decarboxylase [Opitutus terrae PB90-1] Length = 434 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 66/403 (16%), Positives = 121/403 (30%), Gaps = 38/403 (9%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP Y+ + N +++ A+K + + G S Sbjct: 24 LYGTPTYVYSATTITENYQRLQRSLSGLDLQVCYAMKANGNLALLRLFSNLGAGFDLVSG 83 Query: 61 YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--H 115 E+ G ++ V + EI L N + +L + A L Sbjct: 84 GEIRRVVAAGGNLRKSVFAGVGKSEAEIKLALENQVFAFHVESEPELARINHVAGTLGVK 143 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168 I +R+NP V + ++ G + + + V G+ H + Sbjct: 144 APIAIRVNPDVDAQTHAKITTGKSDNKFGIPLRQAGAAYEAAAKLKNIEVKGVQIHIGSQ 203 Query: 169 NKSFLCFSAMLKNIEKEFG--HFITQIEWISLGGGIHFTD-------------------K 207 S F +K + I + S+GGG+ Sbjct: 204 LTSVAPFVEAVKKLVPFVADLKANHGISYFSIGGGMGIVYRDALASGEQAWWSNQPAGQG 263 Query: 208 DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVE 266 + + + L ++I LE G +V N L T V + KN +IVD+++ Sbjct: 264 MITPESYGEALTPLLAPLGLKILLEHGRFMVGNAGVLLTRVEHLKRGASKNFLIVDAAMN 323 Query: 267 AHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 V + + + A + G C + D F + + V G+ ++F Sbjct: 324 DLVRPAMYDSYHEIVPLHRDSSRRALVADIVGPVCESTDCFAKDRQLQEVGEGELLAFMS 383 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y N +N MP V ++ N Sbjct: 384 AGAYGYAMANRYNARLMPAEVVVRGSSFELVNARETFEQTIAN 426 >gi|325970952|ref|YP_004247143.1| diaminopimelate decarboxylase [Spirochaeta sp. Buddy] gi|324026190|gb|ADY12949.1| Diaminopimelate decarboxylase [Spirochaeta sp. Buddy] Length = 421 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 69/394 (17%), Positives = 124/394 (31%), Gaps = 30/394 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+YL D++ +++N + G A+K + L+Q G SSL Sbjct: 20 LPTPFYLYDEKAIVDNARNLKKLFSWAPGFCNYYAVKACPNPTILKLLSQEGFGADCSSL 79 Query: 61 YEVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E++L G+ E A I + ++ + ++ + + I Sbjct: 80 PELLLSKASGITGKKIMLTSNDTPADEFKAAYELGAIINLDDITHIQALEEAIGTVPETI 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNC------E 168 R NP N ++ G ++ K V H Sbjct: 140 CFRYNPGPD-RTGNAIIGNPVEAKYGVTSSQIVDCYRIMKEKGVKHFGLHTMVASNELDG 198 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV- 227 + + + +IE+I +GGGI + + + +K Sbjct: 199 SYIVETARMLFDLCVRIQKEAGIRIEFIDMGGGIGIPYRLDQEAMDLAMVSKEMQKLYET 258 Query: 228 ----------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 QI E G I L + VL ++ K+ V +D+S+ + L Sbjct: 259 IVVPAGLDPLQIVFECGRVITGPYGYLVSKVLHVTNKYKDYVGLDASMANLMRPALYGSY 318 Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 +T V G C D F ++ GD + D + + Sbjct: 319 HHITVLGKDKQPCDHTYDVTGSLCENNDKFAIDRKLPAMQKGDVVVLHDAGAHGHSMGFN 378 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +N + DG++ IR +Y DY L Sbjct: 379 YNAKLRSAEYLLKRDGSVVMIRRAQTYEDYVETL 412 >gi|148654582|ref|YP_001274787.1| diaminopimelate decarboxylase [Roseiflexus sp. RS-1] gi|148566692|gb|ABQ88837.1| diaminopimelate decarboxylase [Roseiflexus sp. RS-1] Length = 445 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 119/398 (29%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP YL D+ + + + A K + + G S Sbjct: 45 GTPLYLFDEMTIRAACRACRTAFADHYRGTTAVHYAGKALLNIAIAQIIADEGLGLDVVS 104 Query: 60 LYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL-- 114 E+ + F + + K A+ + II + + +L+ + Sbjct: 105 GGELYVALRAGFPTQRIHMHGNAKTHAELEQALAAGIGQIIVDNLDELDMLRRLTAHRSS 164 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167 + + LRI P+++ S+ G + K + GL H Sbjct: 165 PQPVALRIAPNIAADTHAHIQTGHATSKFGLPLDALDAAAEKLCAASGVRLTGLHAHLGS 224 Query: 168 ENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLK 219 + +L + + F IE I+ GGGI + + L Sbjct: 225 QLFDRAPYAAAVEVLLDSAARLRDRFGVLIEEINAGGGIGVPYTTDQPLPDIDAWAALLG 284 Query: 220 EFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPD 271 + + +++ +EPG +I+ T++ +D + ++ Sbjct: 285 DSLVRGCERRGLPLMRLVIEPGRSIIARAGVALYTIVATKPLPHMRFLHIDGGMGDNIRP 344 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L A + + GR C +GD+ ++G+ ++ Y Sbjct: 345 ALYDARYTAALAERMRDPVEECVAIAGRYCESGDVLIRDLMLPRARVGEILAVPVAGAYT 404 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 ++ + +N P + + N R +Y D Sbjct: 405 LSMASTYNLAPRPAVVLINEGEARLIQRRETYEDLIAR 442 >gi|94986995|ref|YP_594928.1| diaminopimelate decarboxylase [Lawsonia intracellularis PHE/MN1-00] gi|94731244|emb|CAJ54607.1| Diaminopimelate decarboxylase [Lawsonia intracellularis PHE/MN1-00] Length = 421 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 61/391 (15%), Positives = 113/391 (28%), Gaps = 33/391 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ ++ + + + + K + + + S E Sbjct: 28 GSPLYVYNESIIRQRCKEIKSLSSYPNFFVSYSAKANTNPTLLSIIKDEGCLVDAMSPGE 87 Query: 63 VMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V L + F + Y EI + N + +++SQL + KI + Sbjct: 88 VYLHKKVGFKSDEILYVCNNISAEEIQYAIDNKILLSIDSLSQLETYGKL--NPGGKIMV 145 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174 RINP + ++ G + +++ + G+ H Sbjct: 146 RINPGIGTGHHKKVITAGKETKFGINTEQFSDVKKIVDTYQLMLVGINQHIGSLFLDPQN 205 Query: 175 FSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-------- 223 + + + + Q+E I GGG K Y + K + Sbjct: 206 YLDSIAFLLQFIDNNPWIFEQLEIIDFGGGFGIPYKKYEEQPRLDLKKMSEQFNTKIMDW 265 Query: 224 ----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES 278 Y + Y+EPG I+ + L +V + N I D + L Sbjct: 266 VASTGYKGRFYIEPGRYIIAESGILLGSVHVVKYNGPIRYIGTDVGFNVLMRPVLYDAYH 325 Query: 279 ATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 V G C +GDI ++ GD I DV Y + Sbjct: 326 EIEVYRKNGTPDLQLIPQTVVGNICESGDIIANKRPLPLIQEGDIIGILDVGAYGFVMSS 385 Query: 333 WFNGINMPTIAVKNVDGT-IKAIREFSYNDY 362 +N P + +G + + D Sbjct: 386 NYNQRPRPAEVLIQQNGEPKLIRKRETIEDM 416 >gi|224284657|gb|ACN40061.1| unknown [Picea sitchensis] Length = 488 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 67/397 (16%), Positives = 131/397 (32%), Gaps = 35/397 (8%) Query: 1 MIKT----PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 +I T P+YL K ++ N + K + A+K + + L G Sbjct: 89 VIDTMERRPFYLYSKPQITRNYEAYENALKGLDSIIGYAVKANNNLKILEHLRSLGSGAV 148 Query: 57 SSSLYEVMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 S E+ L F +N ++ + + ++ L + A+ Sbjct: 149 LVSGNELRLALNAGFDPSRCIFNGNGKLLDDLVLAANEGVLVNIDSEFDLENIVEAAKIA 208 Query: 115 HK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFH 164 K ++ LRINP V S+ G + + N+ G H Sbjct: 209 KKKVQVLLRINPDVDPEVHPYVATGNKNSKFGIRNEKLQWFLDTVKAHPNELNLVGAHCH 268 Query: 165 NNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQ 216 F + + +I+++++GGG+ D Sbjct: 269 LGSTITKVNIFKDAAVLMIQYIDQIRAQGFEIKYLNIGGGLGIDYHHKGEVLPTPMDLIN 328 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLY 275 +++ ++ + +EPG ++V N+ L + V+ + N KN +++D S+ + L Sbjct: 329 SVRKLVISGNLTLIVEPGRSLVANSGVLVSRVVGVKTNGNKNFIVMDGSMAELIRPSLYG 388 Query: 276 QESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVK--IGDRISFEDVAGYNI 328 + T V G C + D G+ G + D Y + Sbjct: 389 AYQHIELISPPAPKAKIQTFDVVGPVCESADFLGKDRELPTPAMWAG--MVVHDAGAYCM 446 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + + +N P DG++K IR + D+ Sbjct: 447 SMASTYNLRMRPAEYWIQDDGSVKKIRHAETIEDHLR 483 >gi|297745130|emb|CBI38969.3| unnamed protein product [Vitis vinifera] Length = 399 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 125/387 (32%), Gaps = 27/387 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ N + + + A+K + + L + G S E+ Sbjct: 8 PFYLYSKPQIARNFEAYREALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELR 67 Query: 65 LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 L F +N ++ + ++ L+ A+ + L Sbjct: 68 LALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIAGKKVNVLL 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172 RINP V S+ G D +++ + G H Sbjct: 128 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 187 Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F + +I ++++GGG+ +D ++E Sbjct: 188 DIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLS 247 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +++ NT L V+ + N KN V++D S+ + L Sbjct: 248 RDLNLIIEPGRSLIANTCCLVNRVIGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELV 307 Query: 284 NTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P T V G C + D G+ G + D Y ++ + +N Sbjct: 308 SPPPSDAQISTFDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASSYNLKM 367 Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364 P DG++ IR ++ D+ Sbjct: 368 RPPEYWVEDDGSVSKIRHGETFEDHVR 394 >gi|221200534|ref|ZP_03573576.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD2M] gi|221206215|ref|ZP_03579229.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD2] gi|221174227|gb|EEE06660.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD2] gi|221179875|gb|EEE12280.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD2M] Length = 412 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 120/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + SL E Sbjct: 16 GTPLWVYDADIIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D AVL + T+ ++ L + A Sbjct: 71 IERSLAAGFSPAGEPEGVVFTADLVDRPTLSAVLKHGVTVNAGSLDMLERVGQHA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIALVRQYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + I+ IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVDHYFRQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 ++V+I +EPG +V TL T V ++ K+ + +D+ + + A Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPAMYGSYHA 307 Query: 280 TIYPNT--------GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G C +GD+F + +IGD + D Sbjct: 308 VSVHAHDGALPAGRPQVDIAIAGPLCESGDVFTQDAGGVVTHRKLPQPQIGDLLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407 >gi|148910718|gb|ABR18426.1| unknown [Picea sitchensis] Length = 488 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 67/397 (16%), Positives = 131/397 (32%), Gaps = 35/397 (8%) Query: 1 MIKT----PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 +I T P+YL K ++ N + K + A+K + + L G Sbjct: 89 VIDTMERRPFYLYSKPQITRNYEAYENALKGLDSIIGYAVKANNNLKILEHLRSLGSGAV 148 Query: 57 SSSLYEVMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 S E+ L F +N ++ + + ++ L + A+ Sbjct: 149 LVSGNELRLALNAGFDPSRCIFNGNGKLLDDLVLAANEGVLVNIDSEFDLENIVEAAKIA 208 Query: 115 HK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFH 164 K ++ LRINP V S+ G + + N+ G H Sbjct: 209 KKKVQVLLRINPDVDPEVHPYVATGNKNSKFGIRNEKLQWFLDTVKAHPNELNLVGAHCH 268 Query: 165 NNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQ 216 F + + +I+++++GGG+ D Sbjct: 269 LGSTITKVNIFKDAAVLMIQYIDQIRAQGFEIKYLNIGGGLGIDYHHKGEVLPTPMDLIN 328 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLY 275 +++ ++ + +EPG ++V N+ L + V+ + N KN +++D S+ + L Sbjct: 329 SVRKLVISGNLTLIVEPGRSLVANSGVLVSRVVGVKTNGNKNFIVMDGSMAELIRPSLYG 388 Query: 276 QESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVK--IGDRISFEDVAGYNI 328 + T V G C + D G+ G + D Y + Sbjct: 389 AYQHIELISPPAPKAKIQTFDVVGPVCESADFLGKDRELPTPAMWAG--MVVHDAGAYCM 446 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + + +N P DG++K IR + D+ Sbjct: 447 SMASTYNLRMRPAEYWIQDDGSVKKIRHAETIEDHLR 483 >gi|169351658|ref|ZP_02868596.1| hypothetical protein CLOSPI_02439 [Clostridium spiroforme DSM 1552] gi|169291880|gb|EDS74013.1| hypothetical protein CLOSPI_02439 [Clostridium spiroforme DSM 1552] Length = 435 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 127/398 (31%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ + + +T K L A K F+ ++ +Y G S Sbjct: 30 GTPLYVMSEGHIRQQFNTLKTKMLEKYENTLPLFASKSFSCLAIYKIAKEYGIGIDCVSA 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + F + ++ K + ++ + ++ ++ A+KL+ Sbjct: 90 GEISIALKAGFDPKKIYFHGNNKLPSEIEYALSHGVENLVIDNFYEIELVQEIAKKLNIV 149 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 + +RI P V ++ G K I++ N +G+ H Sbjct: 150 VNGVIRITPGVYAGGHDYIRVGAKDTKFGFSSHDNTYLKAIKKVIDASNINFDGIHCHVG 209 Query: 167 CENKSFLCFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + + + + + F I ++ GGG + + + Sbjct: 210 SQIEEIQAYVLAMNKFVDIAYEIYDIFGITINKLNAGGGFGICYTKADKPLEFELVVDTI 269 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVL------DISENIKNLVIVDSSV 265 + +EPG V N TV DI + I + ++ Sbjct: 270 MDIITKGFEARNLKRPMVLVEPGRYCVGNAGITLYTVGSYKNIKDIRDYISVDGGMTDNI 329 Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + + A V G++C +GDI + + K GD ++ Sbjct: 330 RSSLYAAKYDAIIANKAEMPADRLVTVAGKNCESGDILIKDIMLQDPKPGDILAMFSTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y+ + +N + P + + + IR +++D Sbjct: 390 YHYTMSSNYNQLPKPAVVFTYKGKSREVIRRQTFDDLI 427 >gi|110802485|ref|YP_697889.1| diaminopimelate decarboxylase [Clostridium perfringens SM101] gi|110682986|gb|ABG86356.1| diaminopimelate decarboxylase [Clostridium perfringens SM101] Length = 431 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 71/400 (17%), Positives = 125/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ + N K G ++ A K F M + +N+ S Sbjct: 29 GTPLYVIDEELVRGNCRRYYNAMKCEERGNRVTYAGKAFINMSMCNLVNEENLYLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F E ++ K V I + + +L AQ+ Sbjct: 89 GELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ LRI P V + S+ G + K +E E +NGL H Sbjct: 149 QKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTVYDAIKRAMELEYIELNGLHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212 + F + + +I+ + LGGG + Sbjct: 209 SQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLGGGFGIYYTEGDKPKEIEEYCSVI 268 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + +EPG +IV N TV I E V + ++ Sbjct: 269 INKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTVGAIKEIPNIRKYVSVDGGMSDNI 328 Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L +I + V G+ C +GD+ ++ GD ++ Sbjct: 329 RPALYSANYESIIANRVFDNSKEIVTVAGKCCESGDVLLNSIEMPRMETGDILAIISTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N I + + + + +Y D N Sbjct: 389 YGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYEDLLRN 428 >gi|154494211|ref|ZP_02033531.1| hypothetical protein PARMER_03559 [Parabacteroides merdae ATCC 43184] gi|154086073|gb|EDN85118.1| hypothetical protein PARMER_03559 [Parabacteroides merdae ATCC 43184] Length = 386 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 115/364 (31%), Gaps = 25/364 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y D L L+T G + A+K A + + +Y G S Sbjct: 15 LATPFYFYDITLLKETLNTVKTEAGKYGYHVHYAVKANANPRILSIIAEYGLGADCVSGG 74 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDK--AQKLHK 116 E+ F Y K + + D FN + ++L ++ A+ Sbjct: 75 EIQAALDAGFPARKIVYAGVGKTDWEINLGLDNDIFCFNVESAAELEILEELAAAKNKVA 134 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169 I LRINP V ++ G E + G+ H + Sbjct: 135 SIALRINPEVDAHTHAKITTGMKENKFGINLSQLGQVLDLVCRLEHIKLIGIHCHIGSQI 194 Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF----- 221 F + I++E ++E ++ GGG+ F Sbjct: 195 TDMAAFRGLVIRVNEIQEELEARGIKVENLNFGGGLGIDYYHPNHLPIPAFDNYFAVFNK 254 Query: 222 --SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--YQ 276 + Q++ EPG +IV +L + VL + + D+ + + Y Sbjct: 255 LLQLRPGQQVHFEPGRSIVAQCGSLISKVLYVKVGETKKFCILDAGFTELIRPAMYDAYH 314 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 I + V G C + D+FG+ GD I+ Y + +N Sbjct: 315 RMENITSDEEVEVYDVVGPICESSDVFGKDVELNRAHRGDLIALRSAGAYGEVMASQYNC 374 Query: 337 INMP 340 +P Sbjct: 375 RKLP 378 >gi|15806761|ref|NP_295481.1| diaminopimelate decarboxylase [Deinococcus radiodurans R1] gi|13124089|sp|Q9RTK2|DCDA_DEIRA RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|6459531|gb|AAF11313.1|AE002017_4 diaminopimelate decarboxylase [Deinococcus radiodurans R1] Length = 379 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 113/370 (30%), Gaps = 21/370 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D ++L L ++ A+K + G SL E Sbjct: 16 GTPLYLYDAEELDAALWRVQRAFG--DARIFYAMKANPNLNLLRRYAAAGVGFECVSLGE 73 Query: 63 VMLG-HEKFGGET-HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ GGE A D E A TI+ + ++ ++ + Sbjct: 74 LLRAEAAGAGGERMILNGPAKSDAEYAAAARLGATIVVDREEEVVLL-----PPGSRVLV 128 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 R+NP+++ S S+ G + + V GL H + Sbjct: 129 RVNPAMTVSTHEHLATGTARSKFGLTPEQVPGTLAELRDAGHEVLGLHMHIGSAIEQAED 188 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 F+A + + H + +++GGG + ++++EPG Sbjct: 189 FTAAFARVTELRAHIG-GLSVLNVGGGWSLNADLEGIAYEAHEAARVFG---AELWVEPG 244 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--PYTAMV 292 +V + L T V+ +N +VD+ + + L V Sbjct: 245 RYLVASAGWLLTRVVGTKRTGRNFCLVDAGMTEFLRPMLYGASHPLYPMWDALATEVWDV 304 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G +C +GD+ + G + + Y + + + P + Sbjct: 305 AGPACESGDLIARGVPLPTPQRGHLLLIGEAGAYGASMSSTYLSRPRPAEVLWTGHDWQL 364 Query: 353 AIREFSYNDY 362 R + D Sbjct: 365 LRRRETPQDI 374 >gi|294101240|ref|YP_003553098.1| diaminopimelate decarboxylase [Aminobacterium colombiense DSM 12261] gi|293616220|gb|ADE56374.1| diaminopimelate decarboxylase [Aminobacterium colombiense DSM 12261] Length = 430 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 124/400 (31%), Gaps = 38/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ + + K + + A K F M + G S Sbjct: 22 GTPLYVLSETAVRERCREVKKDFLCKYPNTRAVYASKAFLTMAMVRIIASEGLGLDVVSG 81 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F E ++ K + A+ + I+ ++ S+L+ +D A++ Sbjct: 82 GEIYTAYRAGFPMEKTIFHGNNKTLEELQLALETGVGRIVADSESELDIIEDAARRRGKR 141 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LR+ P V + S+ G SE + G FH Sbjct: 142 ATLLLRVAPGVDAATHQYMATGHTASKFGFPLAGESISRTIQRIKGSENLVLKGFHFHVG 201 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + +S + + KE E +++GGG + + + + E Sbjct: 202 SQLQSNRSHCLAVDALIKEMVLFSSDLGFVTEELNVGGGYGVPEHEGEERKPLKYFTEGI 261 Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + I +EPG IV+ V I E + V + + Sbjct: 262 MERVIAGCEQAGIPVPAIIIEPGRWIVSEAGITLYKVGSIKEIPGVMTYVSVDGGMTDNP 321 Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVA 324 L + + N + G+ C +GD+ + + D ++ + Sbjct: 322 RPALYGAKYWGVVANRADELAGKKVTIVGKCCESGDVLMKDVMVTDQITRDDILAVFNTG 381 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + N +N + P + + + Y D + Sbjct: 382 AYNFSMANNYNRLPRPAVVLVREGNAYVIVNRQDYEDLLS 421 >gi|314933578|ref|ZP_07840943.1| diaminopimelate decarboxylase [Staphylococcus caprae C87] gi|313653728|gb|EFS17485.1| diaminopimelate decarboxylase [Staphylococcus caprae C87] Length = 421 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 65/394 (16%), Positives = 131/394 (33%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ N + + +G+K + A K F M + + S Sbjct: 26 GTPTIVYDEDQIRNQMRRYHSAFEKSGLKYNISYASKAFTCIQMVKLVQEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + + + +++ A Sbjct: 86 GELYTALEAGFDANRIHFHGNNKTKREIQYALENNIGYFVIDALEEIDLIDKYASD-EVN 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 I LR+NP V + S+ G K S+ + G+ FH + Sbjct: 145 IVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALEAINKVKASKHLQLKGVHFHVGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224 + K + ++E ++LGGG + +P+++ + + ++ Sbjct: 205 IEGTEAMIETAKLVLHWLSENEIKVELLNLGGGFGIKYVEGDESFPIEEGIAEIADAIKE 264 Query: 225 YSVQIY-------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 + + +EPG +IV V I E + V + H+ L Sbjct: 265 TAHSLNYEVPEIGIEPGRSIVGEAGITLYEVGTIKEIPEVNKYVSVDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ T + G+ C +GDI + +K GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDTVTIAGKLCESGDIIIKKAKLPSSIKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|116621306|ref|YP_823462.1| diaminopimelate decarboxylase [Candidatus Solibacter usitatus Ellin6076] gi|116224468|gb|ABJ83177.1| diaminopimelate decarboxylase [Candidatus Solibacter usitatus Ellin6076] Length = 412 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 59/386 (15%), Positives = 101/386 (26%), Gaps = 23/386 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ +L N + A+K ++ + L + G S Sbjct: 23 VGTPVYVYSSAVILGNYRAYADAFAGLPNTICYAVKANSSLAILALLAKAGAGFDIVSGG 82 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK- 117 E+ ++ K S + + S+L A +L K+ Sbjct: 83 ELYRVLAAGGDPSKVVFSGVGKTAGEVEYALSSGIRSFNCESESELALIDAMAARLGKQA 142 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 +R+NP V + G D + G+ H + Sbjct: 143 SFSIRVNPDVDAVTHPYISTGLSQHKFGIAIADAPAVYERARQFRHLVAEGVSCHIGSQI 202 Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + I + LGGG+ + + K Sbjct: 203 LDLSPIQEAVDKVLALANALREQGHPIRHLDLGGGLGVPYRPTEIAPAIADFVCGLRKRV 262 Query: 227 VQ----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES--- 278 + +EPG +IV L T VL N +V D+++ + L Sbjct: 263 TASNLAVTIEPGRSIVGAAGILLTRVLYRKRNGDKEFMVVDAAMNDLIRPSLYRAHHEIL 322 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 P T V G C GD GD ++ Y + +N Sbjct: 323 PLRRNALPPVTVDVVGPVCETGDFLARDREMANAMPGDYLAICTAGAYGFVLSSNYNSRP 382 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + D Y D Sbjct: 383 RAPEVLVTGDTWRVIRERECYADLVR 408 >gi|227832874|ref|YP_002834581.1| Diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC 700975] gi|262182638|ref|ZP_06042059.1| Diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC 700975] gi|227453890|gb|ACP32643.1| Diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC 700975] Length = 445 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 63/404 (15%), Positives = 122/404 (30%), Gaps = 43/404 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D+Q + + A K F + +++ +SL E Sbjct: 39 GTPLYVFDEQDFRSRCRDMAQAFGGPDH-VHYASKAFITKRIVRWVDEEGLCLDVASLNE 97 Query: 63 VMLGHEK-FGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKL--HKK 117 L F E + K+ E + N ++ + +L++ A + Sbjct: 98 AKLALAADFPPERMTAHGNNKEDEYLELCVNEGIGHVVLDNAEELSRLNSIAAAAGRVQP 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168 + +R+ P V + G + +ES + GL H Sbjct: 158 VMIRVKPGVDAHTHEFIATAHEDQKFGISLSTGAAFEVARTVLESANLKLVGLHCHVGSS 217 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKD 213 + F + ++ +E + LGGG +Y + D Sbjct: 218 VFNADGFKLAAERVLSLYKRIHSELGVALEELDLGGGFGIPYMEYEEALDVATLAKDLLD 277 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265 +R + +EPG ++V + V + + ++ + VD + Sbjct: 278 AVERTATELGIKPPFVLVEPGRSLVGASAVTVYRVGTVKDVETGKADLPMRRYLSVDGGM 337 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISF 320 ++ L E P + + G C +GDI E F + GD ++F Sbjct: 338 SDNIRPALYGSEYDVRVVNRRTQGEPVDSRIVGFHCESGDILVNERRFPSDITTGDLLAF 397 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +NG P + +R + D Sbjct: 398 ATTGAYQYMMASRYNGALRPAVVSVRDGKASLMLRRETMEDLLA 441 >gi|256847134|ref|ZP_05552580.1| diaminopimelate decarboxylase [Lactobacillus coleohominis 101-4-CHN] gi|256715798|gb|EEU30773.1| diaminopimelate decarboxylase [Lactobacillus coleohominis 101-4-CHN] Length = 438 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 62/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ N + + V+ + A K F++ ++ + Q S Sbjct: 31 GTPLLVYDVARIRNQMQRFRDVFNQEAVQYEVSYASKAFSSVAIYQVMKQEHAHIDVVSG 90 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ KF +++ K + A+ TI+ + ++ K+ + Sbjct: 91 GELATAIKAKFPLAKVSFHGNNKSRDELAMALDHEVGTIVVDNFHEIELLKELLANRTQT 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LRI P ++ + S+ G + + +V GL H Sbjct: 151 VDVQLRITPGIAAHTNSYIATGQVDSKFGFDVESGQADKALQQLLAISQVHVTGLHAHIG 210 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F +++ + E +++GGG Sbjct: 211 SQIFDVQGFEGVARKLVEIAADWHQKYDFTAEVLNVGGGFGIKYSSEDHPINPEDFVRAI 270 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVEAHV 269 Q +K+ + I++EPG +IV T+ + + V VD + ++ Sbjct: 271 VQVVKKSIHEQNLVMPAIWIEPGRSIVGPAGYTLYTIGSRKDIPGLLSYVSVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + ++ T + G+ C +GDI E + GD + D Sbjct: 331 RPALYNAKYESVLARDPQAPTVETVKIAGKYCESGDILSEQQDLPATQPGDILVMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y+ + +N P + I+ +Y+D Sbjct: 391 YDYAMASNYNRNPRPAVVFVENGHDQLVIKRETYDDL 427 >gi|87124750|ref|ZP_01080598.1| Diaminopimelate decarboxylase [Synechococcus sp. RS9917] gi|86167629|gb|EAQ68888.1| Diaminopimelate decarboxylase [Synechococcus sp. RS9917] Length = 453 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 56/405 (13%), Positives = 112/405 (27%), Gaps = 40/405 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ + + G L A K ++ M + G + S Sbjct: 46 GTPLYVLDEASIRAACRAYREALQRHYPGPSLAVYASKANSSLAMTALVASEGLGLDAVS 105 Query: 60 LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E++ E E + D E+ + T++ + + + Sbjct: 106 AGELLTALEGGMPPERIVLHGNNKSDEELLLAYRSGVTVVADNHHDIERLAQLVPDGGAP 165 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168 ++ LR P + S+ G + V+GL H + Sbjct: 166 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLESVLRSLKGAAWAEVSGLHAHIGSQ 225 Query: 169 NKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDF--------CQR 217 + + +E ++LGGG+ + Sbjct: 226 IFELDPHRDLAAVMADALRLARGLGHPVEDLNLGGGLGIRYVESDDPPSIDTWVQVVASA 285 Query: 218 LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272 + + E+ ++ EPG ++V + E + + VD + + Sbjct: 286 VAKACEERQLSLPRLLCEPGRSLVAAAGVTLYRLGSRKEVPGLRTYLSVDGGMSDNPRPI 345 Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 A T + G+ C +GD+ + GD + YN Sbjct: 346 TYQSLYTACLADRPQAAATETVTLAGKHCESGDVLLKDVALPASASGDVLVVLATGAYNA 405 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN------NLS 367 + + +N I P + + R D LS Sbjct: 406 SMSSNYNRIPRPAAVLVHDGEADLIQRRERPEDLLRYDEIPSRLS 450 >gi|134294044|ref|YP_001117780.1| diaminopimelate decarboxylase [Burkholderia vietnamiensis G4] gi|134137201|gb|ABO58315.1| diaminopimelate decarboxylase [Burkholderia vietnamiensis G4] Length = 412 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 57/400 (14%), Positives = 120/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + A K + + + + + SL E Sbjct: 16 GTPLWVYDADVIRERIAQLRQFDV-----IRYAQKANSNLHILKLMREEGACVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + + A Sbjct: 71 IERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARVGEHA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVHRYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + I+ IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFNQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 ++V+I +EPG +V TL T V ++ ++ + +D+ + + A Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPQHDFVLIDAGFNDLMRPSMYGSYHA 307 Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G C +GD+F + +IGD + D Sbjct: 308 VSVHAPDGTLPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKLPQPQIGDLLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407 >gi|223043171|ref|ZP_03613218.1| diaminopimelate decarboxylase [Staphylococcus capitis SK14] gi|222443382|gb|EEE49480.1| diaminopimelate decarboxylase [Staphylococcus capitis SK14] Length = 421 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 65/394 (16%), Positives = 123/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ N + + +G+K + A K F M + + S Sbjct: 26 GTPTIVYDEDQIRNQMRRYHSAFEKSGLKYNISYASKAFTCIQMVKLVQEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + + + +++ A Sbjct: 86 GELYTALEAGFDANRIHFHGNNKTKREIQYALENNIGYFVIDALEEIDLIDKYASD-EVN 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 I LR+NP V + S+ G K S+ + G+ FH + Sbjct: 145 IVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALEAINKVKASKHLQLKGVHFHVGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----------- 217 + K + ++E ++LGGG + + Sbjct: 205 IEGTEAMIETAKLVLHWLSENEIKVELLNLGGGFGIKYVEGDESFPIEEGIAEITDAIKE 264 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +I +EPG +IV V I E + V + H+ L Sbjct: 265 TAHSLNYEVPEIGIEPGRSIVGEAGITLYEVGTIKEIPEVNKYVSVDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ T + G+ C +GDI + +K GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDTVTIAGKLCESGDIIIKKAKLPSSIKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|170750439|ref|YP_001756699.1| diaminopimelate decarboxylase [Methylobacterium radiotolerans JCM 2831] gi|170656961|gb|ACB26016.1| diaminopimelate decarboxylase [Methylobacterium radiotolerans JCM 2831] Length = 422 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 61/389 (15%), Positives = 109/389 (28%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y L + + A+K + + TL G S Sbjct: 25 VGTPFYCYSTATLERHYRVFAEAFAADDALVCFAMKANSNQAVLRTLAARGAGMDIVSGG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHK 116 E+ ++ K A+ + + +L + A L Sbjct: 85 ELQRALAAGVDPGKIVFSGVGKSRAEMEAALTAGIFCFNVESEPELAVLSEVAVGLGLRA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + +R+NP V + ++ G V+G+ H + Sbjct: 145 PVSVRVNPDVDAGTHAKISTGKYENKFGIPITRAPAVYAAAAALPGIAVHGVDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR-----LKEF 221 F+ + + + I GGG+ +D L+ Sbjct: 205 TDLAPFADAARLLAGLARELLAAGHPLRHIDFGGGLGIPYRDDNAPPPDPAALAATLRPH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 ++ E G IV N L T VL + + + VIVD+++ + L Sbjct: 265 FAPLGLRPVFEIGRMIVGNAGILLTRVLYVKHSEGRTFVIVDAAMNDLIRPTLYEAYHGL 324 Query: 281 IYPNT-GPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 GP T A V G C +GD V+ GD I+ Y + +N Sbjct: 325 RPVIEPGPETSRLVADVVGPVCESGDYLALNREMPEVRPGDLIAVMSAGAYGAVQSCTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 385 TRPLVPEVLVRGDRAAVVRPRLDVDALIA 413 >gi|94312207|ref|YP_585417.1| diaminopimelate decarboxylase [Cupriavidus metallidurans CH34] gi|93356059|gb|ABF10148.1| diaminopimelate decarboxylase (DAP decarboxylase) [Cupriavidus metallidurans CH34] Length = 419 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 117/388 (30%), Gaps = 26/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P ++ + L + K + A+K + + Q G S E Sbjct: 27 GSPTFVYSRAALTAAYNAYAAACKGRNAHVQYAVKANSNLAVLQVFAQLGAGFDIVSGGE 86 Query: 63 VMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 ++ ++ A+ + ++ +L++ A +L K+ Sbjct: 87 LLRVIAAGGDPRKVVFSGVAKNVADMELALSHDVRGFNVESIPELDRLNAVAGRLGKRAR 146 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 LRINP V ++ G +D + + V G+ H + Sbjct: 147 VSLRINPDVDAKTHPYISTGLKANKFGVAFEDVLPTYRAAAALPNIEVTGIDCHIGSQIT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + L ++ + ++E I +GGG+ T D D + ++ Sbjct: 207 EVAPYLEALDKVLDVVEALEAEGIKLEHIDVGGGLGITYNDETPPDITKFATTLIDRVAA 266 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278 ++ EPG ++V N L T V + + D+++ + Sbjct: 267 RGHGHREVLFEPGRSLVGNAGVLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAFHRI 326 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 N V G C +GD G V+ GD ++ Y + +N Sbjct: 327 EPVAPRNDAGVMYDVVGPVCESGDWLGRDRTLA-VQAGDLLAVMSAGAYGFVMSSNYNTR 385 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + D D + N Sbjct: 386 GRAAEVMVDGDTVHLVRERELPADLFRN 413 >gi|28212040|ref|NP_782984.1| diaminopimelate decarboxylase [Clostridium tetani E88] gi|28204483|gb|AAO36921.1| diaminopimelate decarboxylase [Clostridium tetani E88] Length = 432 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 70/402 (17%), Positives = 126/402 (31%), Gaps = 38/402 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ID+ L + G K+ A K F M + + S Sbjct: 30 TPLYIIDEDFLRGRCKEYYNNFGVEKHGNKVAYAGKSFLTIAMCQIIKEEGLFLDVVSSG 89 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ F ++ K + + + + ++N + A+K + Sbjct: 90 ELYTALKANFPMNKIYFHGNNKTLDEIEMGIELGVGKFVVDNFYEMNNINNMARKKGIKQ 149 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNC 167 I LRI P + + S+ G + + N++G+ H Sbjct: 150 SILLRITPGIEAHTHDYIKTGQVDSKFGFSMVGEEVYKAVETALSLPNINLSGIHCHIGS 209 Query: 168 ENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQRL 218 + M + +++ + +I + LGGG L Sbjct: 210 QIFETTPYEEAVDIMFEILKEIKNRYDYEISEVDLGGGFGIYYTKEDKPKETKEYCEAIL 269 Query: 219 KEFSEKYSVQIY------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 K+ K +EPG +I+ N TL T+ I E V + ++ Sbjct: 270 KKALNKSKELGIKLPMLGIEPGRSIIGNAATLIYTIGAIKEIPGIRKYVSIDGGMNNNIR 329 Query: 271 DYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + + + G+ C GDI E K GD ++ V Y Sbjct: 330 PALYDAKYECEVANNMNSDDRELVTIAGKCCETGDIVIEDVEISKSKSGDILAIPSVGAY 389 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 + + +N I P I + + + S++D N LS Sbjct: 390 GYSMSSNYNKIPKPAIVLVKDGESRVMCKRESFDDMLKNELS 431 >gi|159464022|ref|XP_001690241.1| diaminopimelate decarboxylase [Chlamydomonas reinhardtii] gi|158284229|gb|EDP09979.1| diaminopimelate decarboxylase [Chlamydomonas reinhardtii] Length = 473 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 64/381 (16%), Positives = 123/381 (32%), Gaps = 23/381 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 ++P+YL ++ +N A+K + L G S E Sbjct: 84 ESPFYLYSWNRIAHNYAEYKKALAGLDNLPCYAVKANNNLVIMKQLAAAGAGAVLVSGNE 143 Query: 63 VMLGH-EKFGGET-HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKI 118 + L F + E++ I ++ L A+K + Sbjct: 144 LKLAMKAGFDPKRTILNGNGKLPWELELAAEMGVNINIDSEFDLENIAAAARKTGKKVSV 203 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKS 171 LRINP V S+ G + + + + + G+ H Sbjct: 204 LLRINPDVDPQVHSYVSTGLASSKFGIRNSHIKWFLDEIRKEPLLELVGVHSHLGSTITK 263 Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSE 223 F ++ + K Q++++++GGG+ D +++ + Sbjct: 264 VNIFRDAAVIMCDFVKMIRAEGFQLKYLNIGGGLGIDYSHQGQVLPTPTDLIDTVRDIVK 323 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282 + + + +EPG ++V + L TV + N KN +++D S+ + L Sbjct: 324 ELGLTLVIEPGRSMVATGSALVNTVTGVKTNGNKNFIVIDGSMATLIRPSLYGAYQHIEL 383 Query: 283 PNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 T V G C +GD G+ GD I D Y ++ + +N Sbjct: 384 TKPHSTPVQTFDVVGPICESGDYLGKDRELATPSKGDGIVVHDAGAYCMSMASNYNLKMK 443 Query: 340 PTIAVKNVDGTIKAIREFSYN 360 P + G K E + + Sbjct: 444 PAEYMVENGGLRKIRHEETLD 464 >gi|269203022|ref|YP_003282291.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ED98] gi|262075312|gb|ACY11285.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ED98] Length = 421 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 123/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P + + I+ S N Sbjct: 385 SNYNQMQKPYVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|224080381|ref|XP_002306119.1| predicted protein [Populus trichocarpa] gi|222849083|gb|EEE86630.1| predicted protein [Populus trichocarpa] Length = 487 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 118/386 (30%), Gaps = 26/386 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ N++ + + A+K + + L G S E+ Sbjct: 97 PFYLYSKPQITRNVEAYKDALQGLNSIIGYAIKANNNLKILEHLRGLGCGAVLVSGNELR 156 Query: 65 LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 L F +N ++ + ++ L A+ + L Sbjct: 157 LALRAGFDPTRCIFNGNGKLLDDLVLAAQEGVFVNVDSEFDLENIVAAARIAGKKVNVLL 216 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172 RINP V S+ G D +++ + G H Sbjct: 217 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHRDELKLVGAHCHLGSTITKV 276 Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F + +++++++GGG+ +D ++E Sbjct: 277 DIFRDAAVLMVNYIDEIRAQGFEVDYLNIGGGLGIDYYHSGAVLPTPRDLIDTVRELVLS 336 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +++ NT L V + N KN V++D S+ + L Sbjct: 337 RDLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELV 396 Query: 284 NTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + T V G C + D G+ G + D Y ++ + +N Sbjct: 397 SPASPKAEVSTFDVVGPVCESADFLGKDRELPTPAKGAGLVVHDAGAYCMSMASTYNLKM 456 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 P K ++ D+ Sbjct: 457 RPPEYWVEDGTVSKIRHGETFEDHIR 482 >gi|156741027|ref|YP_001431156.1| diaminopimelate decarboxylase [Roseiflexus castenholzii DSM 13941] gi|156232355|gb|ABU57138.1| diaminopimelate decarboxylase [Roseiflexus castenholzii DSM 13941] Length = 448 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 115/398 (28%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP YL D++ + + T + A K + + G S Sbjct: 42 GTPLYLFDEETIRSACRTWRTALAACYRGETAVHYASKALLNTALTHLIADEGLGLDVVS 101 Query: 60 LYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDK--AQKL 114 E+ + F + + K A+ S II + + +L + + Sbjct: 102 GGELYVALRAGFPPQRIHMHGNAKTRAELEQALASGIGQIIVDNLDELAMLANLTAYRSP 161 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNC 167 + I LRI P + + S+ G + + + GL H Sbjct: 162 PQPIALRIAPDIVTNTHAHIQTGHATSKFGLPLDALDAAAERLRTAPGLCLIGLHAHLGS 221 Query: 168 ENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + ++A + + I+ I++GGG L Sbjct: 222 QLFDLEPYAAEIDTLLDSASRLRDRHGFIIQQINIGGGAGVPYTADQHPFDVHALAMRLG 281 Query: 224 KYSV-----------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPD 271 + + +EPG +I+ T++ +D + ++ Sbjct: 282 EALTDECRRRGFPLLHLVIEPGRSIIARAGVALYTIIATKNLPHMRFLHIDGGMGDNIRP 341 Query: 272 YLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + + + + GR C +GD+ +GD ++ Y Sbjct: 342 ALYGARYSAVLAERANAPIEESVAITGRYCESGDVLIHAAPLPRASVGDILAVPVAGAYT 401 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 ++ + +N P + + N R +Y D Sbjct: 402 LSMASTYNLTPRPAVVMVNGGSVRLIQRRETYEDMIAR 439 >gi|313672479|ref|YP_004050590.1| diaminopimelate decarboxylase [Calditerrivibrio nitroreducens DSM 19672] gi|312939235|gb|ADR18427.1| diaminopimelate decarboxylase [Calditerrivibrio nitroreducens DSM 19672] Length = 417 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 68/393 (17%), Positives = 123/393 (31%), Gaps = 30/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N + N G K A+K + L + G SSL Sbjct: 21 PTPFHIYDEKGIRENARRLKNVFSWNKGFKEFFAVKACPNPYILKILKEEGFGADCSSLP 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L GE + E I + ++ ++ ++ KL + + Sbjct: 81 ELVLSEKVGIVGEEIMFTSNETPANEYKKAYELGAIINLDDITHISYLENTLGKLPELLC 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENK----- 170 R NP + ++ G E K V H + Sbjct: 141 FRYNPGPLREGNAIIGKP-EEAKYGFTKAQLFEGYKIIKEKGVKRFGLHTMVASNELNPD 199 Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 +L+ + + + E+I++GGGI + Q + + + Sbjct: 200 YFIETVRMLLELVLEINKELGIKFEFINMGGGIGIPYRPGQKAVDLQYVSNGIKSLFETM 259 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 Y+E G I L T + KN + VD+ + + + Sbjct: 260 LKGSGMEDLKLYMENGRMITGPYGYLVTKAIHRKNIYKNYIGVDACMANLMRPGMYGAYH 319 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F ++IGD I D + + Sbjct: 320 HITVMGKENAKHDKVYDVVGSLCENNDKFAIDRNLPEIEIGDIIVIHDTGAHGYAMGFNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DGT++ IR + +DY+ L Sbjct: 380 NGKLRSAELLLKEDGTVEQIRRAETIDDYFATL 412 >gi|220904861|ref|YP_002480173.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869160|gb|ACL49495.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 425 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 57/394 (14%), Positives = 113/394 (28%), Gaps = 34/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ L + + + G + ++K + + + + S E Sbjct: 28 GTPLYVYNENVLRQRCRDLMGLSSHPGFGVNYSVKANSNPVLLRMAREEGLVVDAMSPGE 87 Query: 63 VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 + + F Y E I ++V+QL+ K+ + Sbjct: 88 LHMDLLAGFTPGQILYISNNNSVEELQNALKHGLLISVDSVAQLDDLGRI--NKGGKVMI 145 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNC----ENK 170 R NP + ++ G + ++ + G+ H Sbjct: 146 RFNPGIGAGHHAKVVTAGKETKFGVNPEQMDDVFALLQKHDMTLAGINQHIGSLFMEAGG 205 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----------CQRLKE 220 +L+ E+ + +E I GGG + Y + + Sbjct: 206 YLDAAEVLLRLAEQLPQGALQHLEIIDFGGGFGIPYRKYEGQPRLDTGELGSRLHALISA 265 Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE 277 +++K Y+ + +EPG + L V + N + D V + Sbjct: 266 WAKKTGYTGRFLIEPGRYVAAECGVLLGRVHAVKNNSEKRYAGTDLGFNVLVRPAMYDSF 325 Query: 278 SATIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + V G C +GDI + + GD + D Y Sbjct: 326 HDVEIYGENSHEKRETMVQTVVGNICESGDILAKDRELPEIVEGDVLGILDAGAYGFTMS 385 Query: 332 NWFNGINMPTIAVKNVDG-TIKAIREFSYNDYYN 364 + +N P + DG R S +D Sbjct: 386 SNYNQRLRPAEVLIQSDGTARLIRRRESPDDLAR 419 >gi|150008634|ref|YP_001303377.1| diaminopimelate decarboxylase [Parabacteroides distasonis ATCC 8503] gi|298376070|ref|ZP_06986026.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_19] gi|149937058|gb|ABR43755.1| diaminopimelate decarboxylase [Parabacteroides distasonis ATCC 8503] gi|298267107|gb|EFI08764.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_19] Length = 385 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 70/370 (18%), Positives = 118/370 (31%), Gaps = 25/370 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y D + L + LD G + A+K A + + G S Sbjct: 14 LSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIAANGLGADCVSGG 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKA--QKLHK 116 EV F + + K + + D FN S + + A + Sbjct: 74 EVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELGIINELAAAKNKVA 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169 I LRINP V ++ G E + + G+ H + Sbjct: 134 SIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKNVKLIGIHSHIGSQI 193 Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 F I++E +E ++ GGG+ F+ + Sbjct: 194 TDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAIHK 253 Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276 Q++ EPG +IV TL + VL + E K I+D+ + + Y Sbjct: 254 LLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDAYH 313 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 I + T V G C + D+FG+ GD I+ Y + +N Sbjct: 314 RIENISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMASQYNC 373 Query: 337 INMPTIAVKN 346 ++P + Sbjct: 374 RHLPKAYYSD 383 >gi|291534314|emb|CBL07426.1| Diaminopimelate decarboxylase [Roseburia intestinalis M50/1] gi|291538057|emb|CBL11168.1| Diaminopimelate decarboxylase [Roseburia intestinalis XB6B4] Length = 427 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 128/391 (32%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G + A+K + D L +Y G +SL Sbjct: 20 PTPFHLYDEKGIRENAKAVKEAFSWNPGFREYFAVKATPNPYILDILKEYDCGCDCASLT 79 Query: 62 EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML + F G+ ++ E I + + ++ + K+ + I Sbjct: 80 ELMLADSQGFDGKHIMFSSNDTPAEEFKFANELGAIINLDDFTHIDFLEKTIGKIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---------SEIKNVN-GLMFHNNCEN 169 R NP + N ++ G + IE ++ V+ L + Sbjct: 140 CRYNPGGVFKMSNGIMDNPGDAKYGFTHEQIIEGFKILKEKGAKHFGVHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--- 226 + + + + I++I+L GG+ + + + + ++ Sbjct: 200 YYPKLARQLFELVVELRDKTGCDIQFINLSGGVGVPYTPDQTPNDIRVIGQGVKEAFEEI 259 Query: 227 --------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + IY E G ++ L T + K + VD+ + + Sbjct: 260 LVPAGLGNISIYTEMGRFMLAPYGCLVTKAIHEKHTYKEYIGVDACAVNLMRPAIYGAYH 319 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + +GD + D + + + Sbjct: 320 HITVMGKEDEPCDHKYDVTGSLCENCDKFAIDRMLPKIDMGDLLVIHDAGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+ + IR + +DY+ Sbjct: 380 NGKLRSAEVLLKEDGSTQLIRRAETPDDYFR 410 >gi|161507355|ref|YP_001577309.1| diaminopimelate decarboxylase [Lactobacillus helveticus DPC 4571] gi|160348344|gb|ABX27018.1| Diaminopimelate decarboxylase [Lactobacillus helveticus DPC 4571] Length = 438 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 120/398 (30%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D +++ + + + + VK + A K FA M+ T S Sbjct: 31 GTPLVVYDVEQIRHQIRAFKKVFEEENVKYVVSYASKAFACIAMYQVAAAEGAYTDVVSD 90 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + F + +++ K + ++ II + ++ Sbjct: 91 GELYTALKVNFPVKKISFHGNNKSKSELEMAVKNHIGKIIIDNFHEIKLLDQVLRKHDAK 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G + + + N+ G+ H Sbjct: 151 IDVMLRITPGISAHTHEYDQTGQVDSKFGFDLESGQADLALEQVLANSRMNMIGIHAHIG 210 Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQR 217 + F ++ E + + I++GGG Sbjct: 211 SQIFELNGFEMAAKKLMEVAENWRSQYGYTAQVINVGGGFGIKYTAEDNPLRPEEFVRAI 270 Query: 218 LKEFSEKYSVQIY------LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 +K ++ + +EPG +IV T I V VD + ++ Sbjct: 271 VKTIKKEAKNAAFPLPEIDIEPGRSIVGPAGYNLYTTGSRKIVPGHCPYVTVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ + G+ C +GDI + K G ++ D Sbjct: 331 RPALYDAKYETVLATDPRADLTEHVRIAGKYCESGDILADDQALPATKSGSLLAMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I+ S D Sbjct: 391 YGYSMASNYNRNARPAVVFAENGKAQLVIKRESLEDLV 428 >gi|168025185|ref|XP_001765115.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683702|gb|EDQ70110.1| predicted protein [Physcomitrella patens subsp. patens] Length = 515 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 68/389 (17%), Positives = 127/389 (32%), Gaps = 29/389 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K++L N + + + A+K + L + G S E+ Sbjct: 122 PFYLYSKKQLRRNYEAYQEALQGLNSIIGYAVKANNNLKIMQHLRELGSGAVLVSGTELR 181 Query: 65 LG--HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIG 119 L H F +N E++ I ++ L + + ++ K+ Sbjct: 182 LAVEHADFDPARCVFNGNGKLLEELELAAQYGVLINVDSEFDLAQIIEASRITGKKVKVL 241 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS 171 LRINP V S+ G + + + + G+ H Sbjct: 242 LRINPDVDPQVHPYVATGNKNSKFGIRNEKLWWFLEQVKSHPDNLELVGVHCHLGSTITK 301 Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSE 223 F ++ + + I+++++GGG+ KD ++E Sbjct: 302 VDVFRDAAVVMVDFVNKIRSENFNIQYLNIGGGLGIDYYHKGAVLPTPKDLIDTVRELVT 361 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA--- 279 K + + +EPG ++V NT+ + V + N KN +++D S+ + L Sbjct: 362 KEGLTLIIEPGRSLVANTSVFVSNVTGVKTNGTKNFIVIDGSMSELIRPSLYDAYQHIEF 421 Query: 280 --TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T V G C + D G+ K GD + D Y + + +N Sbjct: 422 VAPPAEGAEAKTYDVVGPVCESADFLGKERQLATPKRGDVLVVHDAGAYCMAMSSTYNLR 481 Query: 338 NMPTIAVKNVDGTI--KAIREFSYNDYYN 364 DG K +D+ Sbjct: 482 MRAPEYWVLEDGKTVEKIRHAEQLDDHIR 510 >gi|323466762|gb|ADX70449.1| Diaminopimelate decarboxylase [Lactobacillus helveticus H10] Length = 438 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 118/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ + + + + VK + A K FA M+ T S Sbjct: 31 GTPLVVYDVGQIRHQIRAFKKVFEEENVKYAVSYASKAFACIAMYQVAAAEGAYTDVVSD 90 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + F + +++ K + ++ II + ++ Sbjct: 91 GELYTALKANFPVKKISFHGNNKSKSELEMAVKNHIGKIIIDNFHEIKLLDQVLRKHDAK 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G + + + N+ G+ H Sbjct: 151 IDVMLRITPGISAHTHEYDQTGQVDSKFGFDLESGQADLALEQVLANSRMNMIGIHAHIG 210 Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQR 217 + F ++ E + + I++GGG Sbjct: 211 SQIFELNGFEMAAKKLMEVAENWRSQYGYTAQVINVGGGFGIKYTAEDNPLRPEEFVRAI 270 Query: 218 LKEFSEKYSVQIY------LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 +K ++ + +EPG +IV T I V VD + ++ Sbjct: 271 VKTIKKEAKNAAFPLPEIDIEPGRSIVGPAGYNLYTTGSRKIVPGHCPYVTVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + G+ C +GDI + K G ++ D Sbjct: 331 RPALYDAKYEIVLATDPRADLTEHVRIAGKYCESGDILADDQALPATKSGSLLAMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I+ S D Sbjct: 391 YGYSMASNYNRNARPAVVFAENGKAQLVIKRESLEDLV 428 >gi|254431387|ref|ZP_05045090.1| diaminopimelate decarboxylase [Cyanobium sp. PCC 7001] gi|197625840|gb|EDY38399.1| diaminopimelate decarboxylase [Cyanobium sp. PCC 7001] Length = 472 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 53/396 (13%), Positives = 110/396 (27%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKL-LLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ L + G L L A K ++ + + Q G + S Sbjct: 65 GTPLYVLDEATLRASCRAYSRALSQAYPGPSLALYASKANSSVAITALVAQEGLGLDAVS 124 Query: 60 LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ E + E+ T++ + + + A +L + Sbjct: 125 AGELLTALAGGMPPERIVLHGNNKSLEELALAADRGVTVVADNWRDIELLTELAPQLRQP 184 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE 168 + L + P + S+ G + GL H + Sbjct: 185 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLETVLQHLAACGWARLTGLHAHIGSQ 244 Query: 169 NKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------- 218 ++ + + + +++GGG+ + Sbjct: 245 IFELQPHRDLAGVMADGLQLARSLGHPVTDLNVGGGLGIRYVVSDDPPTIEDWVRTVAGA 304 Query: 219 ----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272 ++ EPG ++V TV + + VD + + Sbjct: 305 VAQACRDRNLELPRLLCEPGRSLVATAGLTLYTVGSRKTIPGLRTYLAVDGGMSDNPRPI 364 Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + + T V G+ C +GD+ + P GD ++ YN Sbjct: 365 TYQSPYTAVLADRPGAEASETVTVAGKHCESGDVLLKDIALPPATSGDLLAVFATGAYNA 424 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + + R D Sbjct: 425 SMASNYNRIPRPAAVLVHDGMADLVQRREQPEDLLR 460 >gi|329769060|ref|ZP_08260482.1| diaminopimelate decarboxylase [Gemella sanguinis M325] gi|328839551|gb|EGF89127.1| diaminopimelate decarboxylase [Gemella sanguinis M325] Length = 430 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 64/399 (16%), Positives = 129/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ L N DT + K+ K +L A K F+ + N+ G SL Sbjct: 29 GTPLYVYDENMLENQCDTFISNFKSEKFKTEVLYASKAFSCLEVLRMANRAGLGVDVVSL 88 Query: 61 YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ + ++ ++ A+ TI+ + + D A++ Sbjct: 89 GEIHTAYKAGYDMSKAYFHGNNKTREELKYAIEVGLGTIVIDNDYEYEMINDLAKESKKT 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRIN + + S+ G + D N G H Sbjct: 149 VDVLLRINTGIDAHTHEYIKTAKDDSKFGYSVYDETIFDLIADINGQSNLNFLGFHSHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD--------F 214 + + +++ + I+ ++LGGG D + Sbjct: 209 SQIFEKSSFYEAAKVVMEFSRRVEEELRLTIKVLNLGGGFGVYYTDEDKPFELGEFLQEY 268 Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + ++ SE + ++ +EPG ++ N + TV + + + + VD + + Sbjct: 269 IKVIETESENFGLELEKVVIEPGRSLTCNAGSTLYTVGGVKKTFAGREYIFVDGGMADNP 328 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N V G+ C +GD+ + GD + Sbjct: 329 RYALYKAKYEAALANKINADENTVYTVAGKCCESGDMLVMDTKLPKAEQGDLLIVPSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + + + I+ + D Sbjct: 389 YNYSMSSNYNRLPKLPVVFVKDGTSRLVIKGETLEDLIR 427 >gi|258510731|ref|YP_003184165.1| diaminopimelate decarboxylase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477457|gb|ACV57776.1| diaminopimelate decarboxylase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 443 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 57/400 (14%), Positives = 114/400 (28%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP D+ + + + + ++ GV ++ A K F + ++ G S Sbjct: 40 GTPLIAYDEGLIRDTIRAFHRVFQDEGVPYQISYASKAFCTMAICQLAHEEGLGIDVVSG 99 Query: 61 YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ + H + E++ + +I + +++ D Q+ Sbjct: 100 GELYTALAAGVPASKLHMHGNNKTPEELEYAIESGIGAVIVDNFDEIDLLADILQETGRT 159 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + +R+ P V + S+ G E E E V G+ H Sbjct: 160 VDVLVRVAPGVEAHTHDYISTGQQDSKFGFDLASHQVEEAFSRLKEVERARVIGVHAHIG 219 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + F M E F ++LGGG D ++ Sbjct: 220 SQIFDVEGFRLLADRMAGVYEDGLRRFGLPFSVLNLGGGFGIPYTDEDAPPVADLVRGVI 279 Query: 223 EKYS----------VQIYLEPGEAIVTNTTTLNTTVL------DISENIKNLVIVDSSVE 266 +++EPG +IV V + + + + Sbjct: 280 RAAKAAFAARGMDVPVLWIEPGRSIVGPAGVTLYRVGSRKVIPGVRNYVAIDGGMTDNPR 339 Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + A + V G+ C +GD+ + GD ++ Y Sbjct: 340 LALYGAKYHACYANRAADPPDRPWSVAGKCCESGDMLIWDLPLPDPQPGDLLAVFATGAY 399 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + +N I P + R ++ D L Sbjct: 400 TYAMASHYNRIPKPAVVFCRDGEARLVARRETWAD-VARL 438 >gi|212702772|ref|ZP_03310900.1| hypothetical protein DESPIG_00802 [Desulfovibrio piger ATCC 29098] gi|212673829|gb|EEB34312.1| hypothetical protein DESPIG_00802 [Desulfovibrio piger ATCC 29098] Length = 426 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 118/393 (30%), Gaps = 35/393 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ L + G + ++K + + + + S E Sbjct: 28 GTPLYVYNETVLRQRCRELKALSSLPGFGVNYSVKANTNPVLLRIIREEGLVVDAMSPGE 87 Query: 63 VML-GHEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + F + Y + + E+ + + I +++SQ+ K+ + Sbjct: 88 LYMDQLAGFTADEILYISNNISEDELRNAVRHGVLISVDSLSQVETLGRV--NPGGKVMV 145 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 R NP + ++ G + ++ ++ G+ H Sbjct: 146 RFNPGIGAGHHAKVVTAGKETKFGVSPELLDDLFAVLKKYDLHLAGINQHIGSLFMEADG 205 Query: 175 FSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----------RLKE 220 + A + E+ + +E I GGG Y + + Sbjct: 206 YIAAAEVLLHLAERLPADVLKNLEVIDFGGGFGIPYHKYEDQPRLDMDDLGRRLHGLISG 265 Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQE 277 ++EK Y+ + +EPG +V L +V N + D V + Sbjct: 266 WAEKTGYTGRFLVEPGRYVVAECGVLLGSVNATKTNGDRRYAGTDLGFNVLVRPAMYDSF 325 Query: 278 SATIYPNTGPY-------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 G V G C +GDI + + GD + D Y Sbjct: 326 HDVEVYRKGAQGPDTETVEQSVVGNICESGDILAKNRQLPLLHEGDVLGVLDAGAYGFVM 385 Query: 331 KNWFNGINMPTIAVKNVDGTIK-AIREFSYNDY 362 + +N + DG+++ R + D Sbjct: 386 SSSYNQRCRAAEILIQADGSVRLIRRRETLEDL 418 >gi|242373699|ref|ZP_04819273.1| diaminopimelate decarboxylase [Staphylococcus epidermidis M23864:W1] gi|242348667|gb|EES40269.1| diaminopimelate decarboxylase [Staphylococcus epidermidis M23864:W1] Length = 421 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 64/394 (16%), Positives = 127/394 (32%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K +G+K + A K F M + + S Sbjct: 26 GTPTIVYDEDQIRTQMRRYHEAFKKSGLKYNISYASKAFTCIQMVKLVQEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K + + + + +++ A Sbjct: 86 GELYTALEAGFDASRIHFHGNNKTKREIQYALENGIGYFVIDALEEIDLIDKYASN-DVN 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + +R+NP V + S+ G K S+ + G+ FH + Sbjct: 145 VVIRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALEAVNKVKTSKHLQLKGVHFHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKE 220 + K + Q++ ++LGGG + V + +KE Sbjct: 205 IEGTEAMIETAKIVLNWLSDNDIQVDLLNLGGGFGIKYVEEDVSFPIEEGIAEITDAIKE 264 Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 + + ++ +EPG +IV V I E + V + H+ L Sbjct: 265 TVQSLNYELPEIGIEPGRSIVGEAGITLYEVGTIKEIPEVNKYVSVDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ T + G+ C +GDI + V+ GD ++ Y+ + Sbjct: 325 AKYQALLVNRHEEADDTVTIAGKLCESGDIIIKNAKLPSSVQRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|148827915|ref|YP_001292668.1| diaminopimelate decarboxylase [Haemophilus influenzae PittGG] gi|148719157|gb|ABR00285.1| diaminopimelate decarboxylase [Haemophilus influenzae PittGG] Length = 450 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 109/366 (29%), Gaps = 25/366 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGNASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ + Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKD 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L + Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325 Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLAREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384 Query: 339 MPTIAV 344 Sbjct: 385 RTAEVF 390 >gi|282910980|ref|ZP_06318782.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus WBG10049] gi|282324675|gb|EFB54985.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus WBG10049] gi|312438200|gb|ADQ77271.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH60] Length = 421 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 125/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G + +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAINKVQQSKYLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQDIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|49483590|ref|YP_040814.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425464|ref|ZP_05601889.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428124|ref|ZP_05604522.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430755|ref|ZP_05607137.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 68-397] gi|257433515|ref|ZP_05609873.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus E1410] gi|257436356|ref|ZP_05612403.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M876] gi|282903980|ref|ZP_06311868.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C160] gi|282905745|ref|ZP_06313600.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908716|ref|ZP_06316534.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282914188|ref|ZP_06321975.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M899] gi|282919110|ref|ZP_06326845.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C427] gi|283958162|ref|ZP_06375613.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus A017934/97] gi|293501215|ref|ZP_06667066.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 58-424] gi|293510176|ref|ZP_06668884.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M809] gi|295427913|ref|ZP_06820545.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591126|ref|ZP_06949764.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MN8] gi|49241719|emb|CAG40409.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271921|gb|EEV04059.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257274965|gb|EEV06452.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278883|gb|EEV09502.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 68-397] gi|257281608|gb|EEV11745.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus E1410] gi|257284638|gb|EEV14758.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M876] gi|282316920|gb|EFB47294.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C427] gi|282322256|gb|EFB52580.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M899] gi|282326980|gb|EFB57275.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331037|gb|EFB60551.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595598|gb|EFC00562.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C160] gi|283790311|gb|EFC29128.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus A017934/97] gi|291096220|gb|EFE26481.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 58-424] gi|291467120|gb|EFF09638.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M809] gi|295128271|gb|EFG57905.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576012|gb|EFH94728.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MN8] gi|315195292|gb|EFU25679.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus CGS00] Length = 421 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 125/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G + +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAINKVQQSKYLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQDIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|148826629|ref|YP_001291382.1| diaminopimelate decarboxylase [Haemophilus influenzae PittEE] gi|148716789|gb|ABQ98999.1| diaminopimelate decarboxylase [Haemophilus influenzae PittEE] Length = 450 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 108/366 (29%), Gaps = 25/366 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 F + ++ ++ + LGGG+ T +P L++ Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++I LEPG AI N L V + +N I D+ + + L + Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C D G+ + GD I+ Y + + +N Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384 Query: 339 MPTIAV 344 Sbjct: 385 RTAEVF 390 >gi|315638230|ref|ZP_07893412.1| diaminopimelate decarboxylase [Campylobacter upsaliensis JV21] gi|315481766|gb|EFU72388.1| diaminopimelate decarboxylase [Campylobacter upsaliensis JV21] Length = 408 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 122/383 (31%), Gaps = 21/383 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D + + K ++ A+K + + L + G S+ E Sbjct: 17 KTPFYLYDFDLIKSRFLQLKNAFKARKSQIFYAMKANSNLSLLQMLARLDSGFDCVSIGE 76 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK----LHKK 117 V ++ K E D + N S+ + L + Sbjct: 77 VKRALRVGVKPYKIIFSGVGKSEEELEQALKFDILYINLESEEEMLLLENVAKRLGLKAR 136 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCE-- 168 I +R+NP+V ++ G + + + + G+ FH + Sbjct: 137 ISIRVNPNVDAKTHPYISTGLNENKFGVELEVARKMYLYAAKSEFLEPVGVHFHIGSQLL 196 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + ++ + +E ++++ +GGG+ + + Q + Sbjct: 197 DISPIHDAALIVAKLLRELKALKIELKFFDVGGGLGVGYEGEEEPCLYHYAQGILANLSG 256 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283 V I LEPG +V + L +VL K ++ D+++ + L + P Sbjct: 257 LDVTIGLEPGRFLVAKSGVLVCSVLYEKITPKKRFMIVDAAMNDLIRPSLYDAYHEIVLP 316 Query: 284 NTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T V G C +GD F + K GD + ++ Y + + +N Sbjct: 317 YTKGEVSPCDVVGGICESGDFFAKDRRLTKSKSGDIVLIKEAGAYGFSMSSNYNTRPRIC 376 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 + + D Sbjct: 377 ELALENGAVKMVRKREKFEDLIA 399 >gi|297811305|ref|XP_002873536.1| hypothetical protein ARALYDRAFT_488028 [Arabidopsis lyrata subsp. lyrata] gi|297319373|gb|EFH49795.1| hypothetical protein ARALYDRAFT_488028 [Arabidopsis lyrata subsp. lyrata] Length = 492 Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 62/387 (16%), Positives = 123/387 (31%), Gaps = 27/387 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ NL+ + + A+K + + L G S E+ Sbjct: 101 PFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELR 160 Query: 65 LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGL 120 L F +N ++ + ++ LN + ++ + L Sbjct: 161 LALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLL 220 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSF 172 RINP V S+ G + + + + G H Sbjct: 221 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPKELKLVGAHCHLGSTITKV 280 Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F + + ++ ++++GGG+ D ++E Sbjct: 281 DIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLS 340 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +++ NT V + N KN +++D S+ + L Sbjct: 341 RDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELV 400 Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P V G C + D G+ G + D Y ++ + +N Sbjct: 401 SPTPPEAEVSKFDVVGPVCESADFLGKDRELPTPPQGACLVVHDAGAYCMSMASTYNLKM 460 Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364 P DG+I IR +++D+ Sbjct: 461 RPPEYWVEEDGSITKIRHAETFDDHLR 487 >gi|218245017|ref|YP_002370388.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 8801] gi|257058041|ref|YP_003135929.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 8802] gi|218165495|gb|ACK64232.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 8801] gi|256588207|gb|ACU99093.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 8802] Length = 474 Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 51/405 (12%), Positives = 117/405 (28%), Gaps = 43/405 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L +++ A K ++ + + G S Sbjct: 60 GSPLYVLDEATLRTACRQYREAFNTYYQGTSQVIYASKAWSCLAIVSIVASEGLGFDVVS 119 Query: 60 LYEV---MLGHEKFGG-------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN---K 106 E+ + E G + + + E+ + TII + +L K Sbjct: 120 GGELHTTIKALEAMGWSTEQIAQQIYFHGNNKSHQELIFAIEIGCTIIVDNWLELETLVK 179 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVN 159 ++ L I LR+ P + S+ G + + Sbjct: 180 LGNQTGTLSIPILLRLTPGIECHTHEYIRTGHLDSKFGFDPNQLDAVFTYVSQQPTLDCR 239 Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQ 216 GL H + + + + ++ +++GGG+ + + Sbjct: 240 GLHAHIGSQIFERQPHQDLGLVMVEWLKKAQNHGLVLQELNIGGGLGIRYVESDDPPSIE 299 Query: 217 RLKEFSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS- 264 + + + ++ + EPG ++V T+ E + + Sbjct: 300 QWVKTVSESVMKACEIHQLPLPKLIAEPGRSLVGPACVTAYTIGSRKEIPQLRTYIAVDG 359 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + + A T + G+ C +GDI + + GD + Sbjct: 360 GMSDNPRPITYQSRYRTVVANRMSEPCTETVTIAGKHCESGDILIKDAQLPQTQPGDILV 419 Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + P + ++ +Y D Sbjct: 420 VMATGAYNHSMASNYNRLPRPAAVLVQEGEANLIVQRETYEDLLR 464 >gi|269219843|ref|ZP_06163697.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 848 str. F0332] gi|269210748|gb|EEZ77088.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 848 str. F0332] Length = 461 Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 54/406 (13%), Positives = 111/406 (27%), Gaps = 44/406 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-----GVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 TP Y++D+ L A G + A K F + + + Sbjct: 45 GTPLYVLDEDVLRARARAWKEAMDEAFSRLRGADVYYAGKAFLCVAVAKAVAHEGLAVDA 104 Query: 58 SSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK- 113 S E+ G + ++ A+ + + +++++L A+ Sbjct: 105 CSEGELRTALAAGVPGSRIGMHGNNKSREEVELALRAEVGHFVVDSLAELEFVDSIARDE 164 Query: 114 -LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMF 163 + LR+ V + G + + + + GL Sbjct: 165 GAVASVMLRVTTGVHAGGHEYMSTAVEDQKFGLSIASGAAWQAVEKTVNTPNLRLLGLHS 224 Query: 164 HNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----- 214 H + F +L + ++ + GGG Sbjct: 225 HIGSQILVVEAFEEAARAVLDLRARVHREIGLELREVDFGGGYGIRYTGGDSAPPSPAQL 284 Query: 215 CQRLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDIS-----ENIKNLVIVD 262 L + ++ +EPG IV TV + + + V VD Sbjct: 285 ASALASVVASHSAESGIEPPRVSIEPGRNIVGPAGVTLYTVGTVKTVELEDGPRRYVSVD 344 Query: 263 SSVEAHVPDYLLYQESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L G + V G+ C +GDI + GD + Sbjct: 345 GGMSDNIRPALYDAAYTAALASREGEGRARSRVVGKHCESGDIVVRDVSLPEDLAAGDIL 404 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + D Sbjct: 405 AVPATGAYGRSMASNYNHVPRPGVVAVRGGASRWIVRRETVEDLLA 450 >gi|78061687|ref|YP_371595.1| diaminopimelate decarboxylase [Burkholderia sp. 383] gi|77969572|gb|ABB10951.1| diaminopimelate decarboxylase [Burkholderia sp. 383] Length = 412 Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 57/400 (14%), Positives = 120/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + + SL E Sbjct: 16 GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNIHILKLMREEGACVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + + A Sbjct: 71 IERSLAAGFSPASEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARIGEHA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + I+ IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVALVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFSQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 + V+I +EPG +V TL T V ++ K+ + +D+ + + Sbjct: 248 RHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHE 307 Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G C +GD+F + +IGD + D Sbjct: 308 VSVHTHEGALLAGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + ++ Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRSAPRLIRRRQTIDELLA 407 >gi|134298993|ref|YP_001112489.1| diaminopimelate decarboxylase [Desulfotomaculum reducens MI-1] gi|134051693|gb|ABO49664.1| diaminopimelate decarboxylase [Desulfotomaculum reducens MI-1] Length = 447 Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 60/399 (15%), Positives = 125/399 (31%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ID+ N + G +++ A K + + + Q G S Sbjct: 30 GTPLYVIDEALFRQNCQNYYRSFTEEYGTEVIYASKTLSNLAICTIVEQEGLGLDVVSGG 89 Query: 62 EVM-LGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ +F E ++ D A+ I+ + + +L A + K Sbjct: 90 ELFTAAKARFPMERVYFHGNNKSPDELRLALDYKVGRIVVDNLYELELLNAIAGEKDTKA 149 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNC 167 LR++P V + S+ G + +E + G+ H Sbjct: 150 SIILRLSPGVEAHTHEYIKTGQIDSKFGLAIENGMAMSAVMRSLELSNILLKGIHCHIGS 209 Query: 168 ENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF-- 221 + ++ M+ ++K F E ++LGGG+ + + + Sbjct: 210 QIFELASYAHAAEVMMNFVQKIFQETGYLAEELNLGGGLGIYYSEGDYPRSVKEYADILM 269 Query: 222 ---------SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 + + ++ +EPG +I + T + I + V + + Sbjct: 270 SAVRAKAAEFDIPAPKVIVEPGRSISGPSGTTLYRIGAIKDIPGIRKYVSVDGGMSDNPR 329 Query: 271 DYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + A + G+ C +GD+ + GD ++ Y Sbjct: 330 PALYKSKYEACLANRVNEEPIEQVSIAGKCCESGDMLIWDIKLPVITTGDILAISCTGAY 389 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N + +N + P + + ++ Y D N Sbjct: 390 NYSMSMNYNRLPRPAMVLVCEGKADLIVKREDYADIIRN 428 >gi|325971325|ref|YP_004247516.1| carboxynorspermidine decarboxylase [Spirochaeta sp. Buddy] gi|324026563|gb|ADY13322.1| carboxynorspermidine decarboxylase [Spirochaeta sp. Buddy] Length = 371 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 120/368 (32%), Positives = 177/368 (48%), Gaps = 10/368 (2%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++++ + L NL ++ VK L ALK FA +F L G T SSL E Sbjct: 10 TPAFVLEYEALQKNLALIKQLQDQVPVKFLFALKGFAMHSVFPELAASACGATISSLNEA 69 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 +L F E HAY Y+D E + + I FN++++ K GLRIN Sbjct: 70 LLASPYF-SEVHAYAPVYQDREFETIARIAKHITFNSLNEYEKHTK--DCPRASKGLRIN 126 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 P S + L DP SRLG + + + ++GL HN CE+ + L +IE Sbjct: 127 PLYSAVETELYDPCAIGSRLGV-LPQALPTLPEGLSGLHSHNLCESTAHD-LEQTLVSIE 184 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTT 242 K +GH + I W++LGGG T K Y ++ F L F ++ Q+YLEPG A V T Sbjct: 185 KHYGHLLPSISWLNLGGGHLVTKKGYDLELFKAVLSSFCMRHPHIQLYLEPGAAFVWETG 244 Query: 243 TLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIYPNTGPYT--AMVCGRSCLA 299 L T +LDI +N ++ + A H+PD L + + + G SCLA Sbjct: 245 YLATRILDIVQNQGITTLMLDTSFATHMPDCLEMPYAPQVVGAEIVQEGGYRLGGCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD G + F+K K+GD + D+ Y + + FNGI + I + DG + ++ FS+ Sbjct: 305 GDWVGSYRFKKQPKVGDTLLLCDMMHYTMVKTTMFNGIALADIGMVR-DGLYQIVKTFSF 363 Query: 360 NDYYNNLS 367 +DY LS Sbjct: 364 DDYQRRLS 371 >gi|310828105|ref|YP_003960462.1| hypothetical protein ELI_2517 [Eubacterium limosum KIST612] gi|308739839|gb|ADO37499.1| hypothetical protein ELI_2517 [Eubacterium limosum KIST612] Length = 425 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 63/398 (15%), Positives = 127/398 (31%), Gaps = 36/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ + L N++ ++AG + A K F GM + +S Sbjct: 20 GTPLYVMSEDILRANINRIKDAFESAGAVYDVNYAGKTFLNMGMCRIIESEGISLDVASG 79 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNC--DTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F ++ + K+ + I+ ++ +L + + ++L + Sbjct: 80 GELYTAVKSGFNPARICFHGSNKNQAELEMALGYKVGRIVIDSEWELERLQLLTEELEQP 139 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCE 168 + R++P + L + S+ G E G+ H + Sbjct: 140 VKVLFRVSPGIEAHTHELIQTGKLDSKFGLPLSQAREIIGRTKEMNYVETAGIHCHIGSQ 199 Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYP-----------VKDF 214 F + + + + I+LGGG + D Sbjct: 200 IADEKPFLLASEVMLDLYKALLSDGLNLTEINLGGGFGIPYLKEDPSFDVTSYIPKMVDH 259 Query: 215 CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272 + + E E +I +EPG ++ TV + E K V VD + + Sbjct: 260 MREMAEQREVPMPKIVVEPGRSVAAPAGITLYTVGTVKEIPGLKKYVSVDGGMADNPRPA 319 Query: 273 LLYQESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + + N V G++C D + + GD ++ YN Sbjct: 320 LYGADYDAVICNKPQDEALMEEVTVSGKACET-DTLIKSIKLPSPQSGDTLAVLHTGAYN 378 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N P + + D + + S+ D N Sbjct: 379 YSMASNYNRFRRPAVILLKGDQSAVLVERESFEDLVKN 416 >gi|154500726|ref|ZP_02038764.1| hypothetical protein BACCAP_04404 [Bacteroides capillosus ATCC 29799] gi|150270615|gb|EDM97924.1| hypothetical protein BACCAP_04404 [Bacteroides capillosus ATCC 29799] Length = 418 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 66/398 (16%), Positives = 121/398 (30%), Gaps = 34/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G K A+K + L++ GT SSL Sbjct: 19 PTPFHLYDEKGIRENARKLKAAFAWNPGFKEYFAVKATPNPTILKILHEEGCGTDCSSLT 78 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G ++ E A TI + + ++ K+ + + I Sbjct: 79 ELMMSDRCGFKGSEIMFSSNDTPAEEFALAAKLGATINLDDFTHIDFLKETIGYIPETIS 138 Query: 120 LRINPSV-----SYSKFILADPNRPFSRLGEKCKDKIE---------SEIKNVN-GLMFH 164 R NP + N ++ G + E ++ ++ L + Sbjct: 139 CRFNPGGTFSIGESKEGFQVMDNPGEAKYGFTREQLFEGFKKLKAMGAKHFGIHAFLASN 198 Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 + + I +I+L GG+ + + + E K Sbjct: 199 TLSNEYYPTLAGILFQLAVDLKKETGCDIRFINLSGGVGVPYRPEQPANDIAVIGEGVRK 258 Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273 I + E G ++ L T K V VD+ + + Sbjct: 259 QYEAILTPAGMGDVAIFTELGRFMLAPYGCLVTKATHFKHTYKEYVGVDACAANLMRPAM 318 Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + V G C D F + +GD + D + Sbjct: 319 YGAYHHITVMGKEDAPCDHKYDVTGSLCENNDKFAVDRMLPEIDLGDLLVIHDTGAHGFA 378 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +NG + DG+ + IR + +DY+ L Sbjct: 379 MGYNYNGRLRSAEVLLKEDGSTELIRRAETPDDYFATL 416 >gi|328957339|ref|YP_004374725.1| diaminopimelate decarboxylase [Carnobacterium sp. 17-4] gi|328673663|gb|AEB29709.1| diaminopimelate decarboxylase [Carnobacterium sp. 17-4] Length = 438 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 63/399 (15%), Positives = 134/399 (33%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D ++ T ++ +K + A K F+ ++ + + S Sbjct: 33 GTPVYVYDISQIKYKARTFKKAFQDRNIKAQVAYASKAFSCLAVYQLMAKEEMSLDVVSG 92 Query: 61 YEVMLG--HEKFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E + H + D EI A + + + +L+K + ++ +K Sbjct: 93 GELFTAIQAEYPNKKIHFHGNNKSDSEIIAALDYDIGCFVVDNFYELSKLNEYTKQRQQK 152 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + LR+ P V + S+ G ++ +E +V GL H Sbjct: 153 VSVLLRVTPGVEAHTHEYITTGQTDSKFGFDLENGQAQQALEMSLEMPYIDVMGLHCHIG 212 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQ------ 216 + FS + + + + Q+ +++GGG + Sbjct: 213 SQIFETDGFSLAIDKLMIQSKEWQVLFDFQLRVLNVGGGFGIRYTSEDEPLPIEDYVNNL 272 Query: 217 -----RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 + E + +I++EPG ++V + V + +++N + +D + ++ Sbjct: 273 IDEVQSVSEKIQLPMPEIWIEPGRSLVGDAGITLYQVGSQKLIPDVRNYLAIDGGMTDNI 332 Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + A + T + G+ C +GD+ D ++ Sbjct: 333 RPALYDAKYTGVLANRVADAVEETYSIAGKCCESGDMLIWDLPLPKADATDILAVFSTGA 392 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N I P + AI+ SY D Sbjct: 393 YGYAMASNYNRIPRPPVVFVENGKDFLAIKRESYADLMR 431 >gi|326332897|ref|ZP_08199154.1| diaminopimelate decarboxylase [Nocardioidaceae bacterium Broad-1] gi|325949255|gb|EGD41338.1| diaminopimelate decarboxylase [Nocardioidaceae bacterium Broad-1] Length = 462 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 64/403 (15%), Positives = 119/403 (29%), Gaps = 42/403 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y++D+ G + A K F + + Q S Sbjct: 58 INTPAYVLDEVDFRERARAFRDAF--TGYDVYYAGKAFLCTEVARWVAQEGLCLDVCSDG 115 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + + Y+ K A+++ II ++ ++ + A + Sbjct: 116 ELSVALRAEVDPAKIGYHGNNKTPMELRRAIVAGVGRIIVDSFVEVERVSAIAAETGITA 175 Query: 119 GLRINP--SVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNC 167 + + V + G E + + + + GL H Sbjct: 176 RVMVRVTAGVEAHTHEYIATAHEDQKFGFSISSGDAFEAVRRLLAAPNVELRGLHSHIGS 235 Query: 168 EN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + + +L + T++ + LGGG + L E Sbjct: 236 QIFDSSGFEVAARRVLALQARIRDELGTELPEMDLGGGFGIAYTTQDDPSTPKALAEELT 295 Query: 224 KYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVE 266 +EPG AIV + TV + E + V VD + Sbjct: 296 AIVEHECRGFGLAVPHLSIEPGRAIVGPSMCTVYTVGTVKEVALDGGVARTYVSVDGGMS 355 Query: 267 AHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFE 321 ++ L + A + GP V G+ C AGDI + F + GD I+ Sbjct: 356 DNIRTALYDADYSATLAGRASSAGPVLGRVVGKHCEAGDIVVKHEFLPADIAPGDLIAVP 415 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + + +R + D + Sbjct: 416 GTGAYGRSMASNYNHALRPPVVAVRDGESRVIVRRETEADLFA 458 >gi|255543757|ref|XP_002512941.1| diaminopimelate decarboxylase, putative [Ricinus communis] gi|223547952|gb|EEF49444.1| diaminopimelate decarboxylase, putative [Ricinus communis] Length = 488 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 126/384 (32%), Gaps = 27/384 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ N++ + + A+K + + + L Q G S E+ Sbjct: 97 PFYLYSKPQITRNVEAYKSALEGLNSIIGYAIKANNNFKILEHLRQLGCGAVLVSGNELR 156 Query: 65 LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 L + + +N ++ + ++ L ++ + L Sbjct: 157 LALRAGYDPKKCIFNGNGKLLEDLVLAAEEGVFVNVDSEFDLENIVAASRIAGEKINVLL 216 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172 RINP V S+ G D +++ + G H Sbjct: 217 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 276 Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F + +I+++++GGG+ +D ++E Sbjct: 277 DIFRDAAVLMVNYIDEIRAQGFEIDYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLS 336 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++ + +EPG +++ NT L V + N KN +++D S+ + L Sbjct: 337 RNLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELV 396 Query: 284 NTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + T V G C + D G+ G + D Y ++ + +N Sbjct: 397 SPAQPIVEVSTFDVVGPVCESADFLGKGRELPTPSKGAGLVVHDAGAYCMSMASTYNLKM 456 Query: 339 MPTIAVKNVDGTIKAIRE-FSYND 361 P DG++ IR ++ D Sbjct: 457 RPPEYWIEEDGSVTKIRHGETFED 480 >gi|121535393|ref|ZP_01667204.1| Orn/DAP/Arg decarboxylase 2 [Thermosinus carboxydivorans Nor1] gi|121305992|gb|EAX46923.1| Orn/DAP/Arg decarboxylase 2 [Thermosinus carboxydivorans Nor1] Length = 428 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 68/393 (17%), Positives = 120/393 (30%), Gaps = 30/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 KTP+++ D++ + N G K A+K + L + G SS+ Sbjct: 21 KTPFHIYDEKGIRENARKLTAAFAWAPGFKEYFAVKATPNPYILQILREEGFGADCSSMA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L GE ++ E I + +S + + A I Sbjct: 81 ELVLAEMVGITGEEIIFSSNDTPAEEYVKAKQLGAIINLDDISHIEFLEKHAGLPEI-IS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNN------CEN 169 R NP + ++ G + ++ K V H Sbjct: 140 FRYNPGPLLKQGNTIIGKPEEAKYGLTRQQIFDAYRIVQAKGVKRFGLHTMVISNELNPQ 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224 + M + + ++E+I LGGGI + + E K Sbjct: 200 CFVETANMMFDLAIEIYQKLGIKVEFIDLGGGIGIPYRPEQQPVDLFYVGEEIRKAYEAK 259 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + +++ +E G I L VL E KN V +D+ + + + Sbjct: 260 IVANGLHPIKLAMECGRMITGPYGYLVARVLHKKEIYKNYVGLDACMANLMRPGMYGAYH 319 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGD + D + + Sbjct: 320 HITVAGKEDWPLDHIYDVTGSLCENNDKFAIDRPLPRIDIGDIVVIHDTGAHGHAMGFNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG++K IR + D + L Sbjct: 380 NGKLRSAELLLRPDGSVKLIRRAETLADLFATL 412 >gi|226360613|ref|YP_002778391.1| diaminopimelate decarboxylase [Rhodococcus opacus B4] gi|226239098|dbj|BAH49446.1| diaminopimelate decarboxylase [Rhodococcus opacus B4] Length = 473 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 58/406 (14%), Positives = 119/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + K+ A K F + + +S E Sbjct: 64 GTPLFVVDEDDFRSRCRDMARAF-GPAAKVHYASKAFLCGEIARWVADEGLSLDVASGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F A + K AV + I+ ++ +++++ A + + Sbjct: 123 LAVALHAGFPAGRIAMHGNNKSVAELNAAVSAGVGHIVLDSATEIDRLDKVAAEAGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + + ++ + GL H + Sbjct: 183 VLIRVTVGVEAHTHEFISTAHEDQKFGFSLAGGKAIDAVRRVFAADNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + F I I LGGG+ + +L Sbjct: 243 IFDVDGFEVAAHRVIGLLRDVVAEFGVDKTAQISIIDLGGGMGISYVPTDDPPPVDQLAA 302 Query: 221 FSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDIS------ENIKNLVIVDS 263 + +EPG AI T V I + V VD Sbjct: 303 KLGDIVRHESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTIKDVTVGSNLTRRYVSVDG 362 Query: 264 SVEAHVPDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L E + + P + V G+ C +GDI + + GD + Sbjct: 363 GMSDNIRTALYQAEYEAKLVSRVSDAAPVVSRVVGKHCESGDIVIRDTWMPEDIDAGDLL 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + D + Sbjct: 423 AVAATGAYCYSMSSRYNLLARPAVVAVRDGQSRVILRRETVEDLLS 468 >gi|227512608|ref|ZP_03942657.1| diaminopimelate decarboxylase [Lactobacillus buchneri ATCC 11577] gi|227084073|gb|EEI19385.1| diaminopimelate decarboxylase [Lactobacillus buchneri ATCC 11577] Length = 435 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 125/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP + D + N + + ++ V + A K FA MF +NQ S Sbjct: 31 KTPLVVYDVSSIRNQIHHFQKVFEDNHVDYAVSYASKAFACIAMFQLVNQENAHIDVVSG 90 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F + +++ K E + II + ++ K + H Sbjct: 91 GELYTAIKAGFPMDHVSFHGNNKSVEELEMAVDHQIGVIILDNFHEIALLKQILKDKDAH 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LR+ P VS + S+ G + + + + G+ H Sbjct: 151 INVMLRVTPGVSAHTHEYDQTGQTDSKFGFDLQSGQARKALDEVLADQRMTMLGIHAHIG 210 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKD--------F 214 + F + G + +I + +++GGG + Sbjct: 211 SQIFEVKGFELAATKLIDTLGQWHKEIGYVAKVVNVGGGFGIRYTEEDDPIAPEMFVDAI 270 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K+ + + +++EPG +I TV + V + ++ Sbjct: 271 VKAIKKRARELALPMPAVWIEPGRSIAGPAGYNLYTVGSRKDVPGIRSYVTVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + N T V G+ C +GDI + K GD ++ Sbjct: 331 RPALYQAEYDAVLANDPKAPAKETVRVAGKYCESGDILIQKQALPQTKPGDVLAMLATGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N P + IR ++ D Sbjct: 391 YGYAMASNYNRNPRPAVIFAENGQDNLVIRRETFEDLIR 429 >gi|330718569|ref|ZP_08313169.1| diaminopimelate decarboxylase [Leuconostoc fallax KCTC 3537] Length = 435 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 66/398 (16%), Positives = 126/398 (31%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP D K+ + + + + V + A K F+A GM++ + Q T S Sbjct: 31 GTPLVAYDVSKIRSQIKAFKRVFEEKQVPYAVSYASKAFSAIGMYEVVAQEGGHTDVVSG 90 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDK--AQKLH 115 E+ + F E ++N K + + + II + +++ + + Sbjct: 91 GELYTALQANFPVEDISFNGNNKSYDELVMAIDAGIGAIIVDNFHEIDLIEQILSTRSTS 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G + +++ N+ G+ H Sbjct: 151 VNVLLRITPGISAHTHEFISTGQEDSKFGFDLKSGQARVAFERVMKNSKINMRGVHAHIG 210 Query: 167 CENKSFLCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F A + + F ++E I++GGG + Sbjct: 211 SQIFDVHGFVAAAEKLVDIVADWRESFGYEVEVINVGGGFGIRYTKDDTPIPAESFVAAI 270 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 E +I++EPG ++V T+ + VD + ++ Sbjct: 271 IDAVKAKTEALNMKMPEIWIEPGRSVVGPAGYSLYTIGSRKDIPGINAYLAVDGGMGDNI 330 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + + G+ C +GDI K GD I+ Sbjct: 331 RPALYQAEYEALLASNVNAKSEEVVRIAGKYCESGDILVWQQALPQTKPGDVIAILATGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + +N P + I SY+D Sbjct: 391 YGYAMASNYNRNPKPAVVFVEDGQAKLVIARESYDDLV 428 >gi|296111895|ref|YP_003622277.1| diaminopimelate decarboxylase [Leuconostoc kimchii IMSNU 11154] gi|295833427|gb|ADG41308.1| diaminopimelate decarboxylase [Leuconostoc kimchii IMSNU 11154] Length = 433 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 66/393 (16%), Positives = 120/393 (30%), Gaps = 33/393 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D K+ + I + GV + A K FA ++ Q S Sbjct: 26 GTPLYVYDVTKIRQTMRAFKTIFEKEGVPYVVSYASKAFATQAIYQVAQQEGIHADIVSG 85 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + ++N K + A+ + II + +L + A + Sbjct: 86 GELFTALQAGFDPKHLSFNGNNKSWDELTMAIEAGVGMIIVDNFLELQLLSEIAAKHNMT 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + I LRI+P +S + S+ G + + N+ GL H Sbjct: 146 QDILLRISPGISAHTHEFISTGQQDSKFGFDLLTGQGKQAYDIAKDDQNLNLLGLHAHIG 205 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFS 222 + F + + Q I++GGG D D+ + Sbjct: 206 SQIFDVTGFEKNAALLADTAQSWGWQPAIINVGGGFGIRYTDEDTPLPESDYADAIIRTL 265 Query: 223 -------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273 + +I++EPG ++V TV + VD + ++ L Sbjct: 266 KSKAAQYDWKMPEIWIEPGRSVVGPAGQTLYTVGSRKDIPDLRQYLAVDGGMGDNIRPAL 325 Query: 274 LYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 A V G+ C +GD+ + GD +S Y Sbjct: 326 YQANYDAVLANQPNAPTEEVVRVAGKYCESGDVLVWQQALPRTQPGDILSVLATGAYGYA 385 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + +N P + + +Y + Sbjct: 386 MASNYNRNPRPGVVFVENGQHQLVVARETYANL 418 >gi|298694694|gb|ADI97916.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ED133] Length = 421 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDIVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKYLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQDIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEKADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|17230489|ref|NP_487037.1| diaminopimelate decarboxylase [Nostoc sp. PCC 7120] gi|17132091|dbj|BAB74696.1| diaminopimelate decarboxylase [Nostoc sp. PCC 7120] Length = 464 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 54/395 (13%), Positives = 113/395 (28%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D++ L + ++L A K + + G S Sbjct: 61 GSPLYILDEETLRTACQQYRDGFQKYYPGESQVLYASKAWNCLAVCAIAASEGLGIDVVS 120 Query: 60 LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + + + E+ + + TI+ + +L A Sbjct: 121 GGELYTALAAGVSPAKIYLHGNNKSREELVLAIESGVTIVADNWYELRILASLADSEEPI 180 Query: 118 IG-LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169 LR+ P + S+ G D + N GL H + Sbjct: 181 RLMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLAEVFEFVSQQPNLNCVGLHAHIGSQI 240 Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKY 225 + + + + + +++GGG+ + + +K E Sbjct: 241 FERQPHRDLAAVMVQWLRDANKYGLNVTELNVGGGLGIKYVESDDPPSIDEWVKAICEVV 300 Query: 226 SVQIYLE----------PGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL 273 E PG +++ + TV I+ V +D + + Sbjct: 301 QAACAAENLPLPKLLSEPGRSLIATSCITAYTVGSSKTIPEIRTYVSIDGGMSDNPRPIT 360 Query: 274 LYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + N T + G+ C +GDI + + GD + YN + Sbjct: 361 YQSVYRAVIANKLSAPHTETVTIAGKHCESGDILIKNAQLPKTEPGDILVVMATGAYNYS 420 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + P V ++ +Y D Sbjct: 421 MASNYNRLPRPAAVVVANGEANLILQRETYQDLIR 455 >gi|28378400|ref|NP_785292.1| diaminopimelate decarboxylase [Lactobacillus plantarum WCFS1] gi|300767341|ref|ZP_07077253.1| diaminopimelate decarboxylase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180552|ref|YP_003924680.1| diaminopimelate decarboxylase [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271235|emb|CAD64140.1| diaminopimelate decarboxylase [Lactobacillus plantarum WCFS1] gi|300495160|gb|EFK30316.1| diaminopimelate decarboxylase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046043|gb|ADN98586.1| diaminopimelate decarboxylase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 441 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 58/399 (14%), Positives = 129/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D + + + + ++ A K FA M+ + Q S Sbjct: 31 QTPLYVYDTGAIRAEIAAFKQVFEENHVDYQISYASKAFATVAMYQLIAQEHIHCDVVSG 90 Query: 61 YEVMLGHEK-FGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + F +++ K A+ + TI+ + +L + + + Sbjct: 91 GELYTAQQADFPMAAVSFHGNNKSLAELTMALDAGVGTIVVDNFGELRQLTTLTTQRQQP 150 Query: 118 IGLR--INPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + I P +S + S+ G + K + + G+ H Sbjct: 151 TTIMLRIAPGISAHTHDYISTGQADSKFGFDLDSGQADQAIKAAQAAPYLKLVGIHCHIG 210 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK-----DFCQR 217 + F ++ + EF + ++++ +++GGG Sbjct: 211 SQIFEVNGFEMIVDKLVSEFARWQRELDFYPQIMNVGGGFGVKYTAEDHPLQPTDFVDAI 270 Query: 218 LKEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 +KE + ++I++EPG ++V T+ D + VD + ++ Sbjct: 271 IKETRAQTAAQQVPMLEIWIEPGRSLVATAGMTLYTIGDEKDIPGIRKYLSVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + A + G+ C +GD+ GD ++ D Sbjct: 331 RPALYQAKYEAVLAKNPALPAEQVASIAGKYCESGDMLIWNQQLPATAPGDVLAVLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + + ++ SY D Sbjct: 391 YGYSMASNYNRNPRPAVVFCEQGHSQLVVQRESYADLTR 429 >gi|320012818|gb|ADW07668.1| diaminopimelate decarboxylase [Streptomyces flavogriseus ATCC 33331] Length = 444 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 61/397 (15%), Positives = 118/397 (29%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ ++ T + +L A K F + M +++ G + S E Sbjct: 46 DTPAYVLDEGEVRARCRTYRAVF--PDADVLYAAKAFLSRAMVRWIDEEGLGLDACSAGE 103 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118 + L F + K I+ ++ S++ + + +K+ Sbjct: 104 LELAVMAGFPAARIVLHGNAKSPRDIETALRLGVGRIVVDSPSEIARLAAQVGSGGRQKV 163 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169 +R+ P VS + G + + GL H + Sbjct: 164 MVRVVPGVSAGGHEKIRTGTDGQKFGLSLTDGSAQHAIARVLGQPQLELTGLHCHIGSQI 223 Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221 + M+ + + + +GGG + +RL Sbjct: 224 TDVKPYLVAVRRMVGLMARIKESHGVTFPELDMGGGHGVAYRAGESALDLTALARRLNGE 283 Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYL 273 ++ +EPG A+ VL + V VD + + L Sbjct: 284 LSASCAAAGLPVPRLVIEPGRAVAAPAGVAVYRVLAVKPTGSTMFVAVDGGMSDNPRPAL 343 Query: 274 LYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 A P V GR C AGDI V+ GD ++ Y + Sbjct: 344 YGARYAPRLVGRSTTAEPVATTVVGRHCEAGDILAADVLLPGDVRPGDLLAVPVSGAYQL 403 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + +R + D+ Sbjct: 404 SMASDYNLVGRPPVVAVHDGSARLLVRRETQEDFRRR 440 >gi|303228963|ref|ZP_07315773.1| putative diaminopimelate decarboxylase [Veillonella atypica ACS-134-V-Col7a] gi|302516377|gb|EFL58309.1| putative diaminopimelate decarboxylase [Veillonella atypica ACS-134-V-Col7a] Length = 418 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 66/393 (16%), Positives = 123/393 (31%), Gaps = 29/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ ++NN+ + N G K A+K + L + G SSL Sbjct: 21 PTPFHIYDEEGIVNNMKRFISAFSWNKGFKQYFAVKATPNPYIMRVLQKLGVGADCSSLA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L G + E L I + ++ + + L Sbjct: 81 ELLLCEKVGITGHDIMFTSNDTPYVEYKKALDMGAIINLDDITHIEYLEKHHGSLPDTFC 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174 +R NP ++ G + E+ + V H + Sbjct: 141 VRYNPGPLKEGGNTIIGLPEEAKYGMTREQVFEAYKQLQAKGVKHFGLHTMVVSNELDID 200 Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + +E+I LGGG+ K ++L E + +I Sbjct: 201 GLVGTAEICFNLAVEIKEKLGIDVEFIDLGGGVGVAYKPEQTPVDFEKLGERVHEAYDRI 260 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E G + L +T + + ++ + +DS + + L Sbjct: 261 IKGNGLKDIALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDSCMANLMRPALYGSYH 320 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGDRI D + + + Sbjct: 321 HITVMGKENAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRIIIHDAGAHGHSMGFNY 380 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + + DG++ IR +Y+D + L Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413 >gi|303232009|ref|ZP_07318715.1| putative diaminopimelate decarboxylase [Veillonella atypica ACS-049-V-Sch6] gi|302513339|gb|EFL55375.1| putative diaminopimelate decarboxylase [Veillonella atypica ACS-049-V-Sch6] Length = 418 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 66/393 (16%), Positives = 123/393 (31%), Gaps = 29/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ ++NN+ + N G K A+K + L + G SSL Sbjct: 21 PTPFHIYDEEGIVNNMKRFISAFSWNKGFKQYFAVKATPNPYIMRVLQKLGVGADCSSLA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L G + E L I + ++ + + L Sbjct: 81 ELLLCEKVGITGHDIMFTSNDTPYVEYKKALDMGAIINLDDITHIEYLEKHHGSLPDTFC 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174 +R NP ++ G + E+ + V H + Sbjct: 141 VRYNPGPLKEGGNTIIGLPEEAKYGMTREQVFEAYKQLQVKGVKHFGLHTMVVSNELDID 200 Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + +E+I LGGG+ K ++L E + +I Sbjct: 201 GLVGTAEICFNLAVEIKEKLGIDVEFIDLGGGVGVAYKPEQTPVDFEKLGERVHEAYDRI 260 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E G + L +T + + ++ + +DS + + L Sbjct: 261 IKGNGLKDIALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDSCMANLMRPALYGSYH 320 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGDRI D + + + Sbjct: 321 HITVMGKENAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRIIIHDAGAHGHSMGFNY 380 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + + DG++ IR +Y+D + L Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413 >gi|254556609|ref|YP_003063026.1| diaminopimelate decarboxylase [Lactobacillus plantarum JDM1] gi|254045536|gb|ACT62329.1| diaminopimelate decarboxylase [Lactobacillus plantarum JDM1] Length = 441 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 58/399 (14%), Positives = 128/399 (32%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D + + + + ++ A K FA M+ + Q S Sbjct: 31 QTPLYVYDTGAIRAEIAAFKQVFEENHVDYQISYASKAFATVAMYQLIAQEHIHCDVVSG 90 Query: 61 YEVMLGHEK-FGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + F +++ K A+ + TI+ + +L + + + Sbjct: 91 GELYTAQQADFPMAAVSFHGNNKSLAELTMALDAGVGTIVVDNFGELRQLTTLTTQRQQP 150 Query: 118 IGLR--INPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + I P +S + S+ G + K + + G+ H Sbjct: 151 TTIMLRIAPGISAHTHDYISTGQADSKFGFDLDSGQADQAIKAAQAAPYLKLVGIHCHIG 210 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK-----DFCQR 217 + F ++ + EF + ++++ +++GGG Sbjct: 211 SQIFEVNGFEMIVDKLVSEFARWQRELDFYPQIMNVGGGFGVKYTAEDHPLQPTDFVDAI 270 Query: 218 LKEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 +KE + ++I++EPG ++V T+ D + VD + ++ Sbjct: 271 IKETRAQTAAQQVPMLEIWIEPGRSLVATAGMTLYTIGDEKDIPGIRKYLSVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + A + G+ C +GD+ GD + D Sbjct: 331 RPALYQAKYEAVLAKNPALPAEQVASIAGKYCESGDMLIWNQQLPATAPGDVLVVLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + + ++ SY D Sbjct: 391 YGYSMASNYNRNPRPAVVFCEQGHSQLVVQRESYADLTR 429 >gi|254520637|ref|ZP_05132693.1| diaminopimelate decarboxylase [Clostridium sp. 7_2_43FAA] gi|226914386|gb|EEH99587.1| diaminopimelate decarboxylase [Clostridium sp. 7_2_43FAA] Length = 430 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 66/400 (16%), Positives = 127/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+Q L++N + K + ++ A K F M +++ S Sbjct: 29 GTPLYVMDEQLLIDNCRDYVKYFKVNSENNRVAFAGKAFLTLEMCRLIDREGLYLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E ++ K E I + + ++ K + + Sbjct: 89 GELYTAYKANFPMEKIYFHGNNKTLEEIEFGIKLGVGRFIVDNLWEMIKINEISEKYNKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 +K+ LR+ P + + S+ G + K +E E + GL H Sbjct: 149 QKVYLRLTPGIEAHTHEYIKTGQIDSKFGFAPVGNIIMDAIKKALELENIELVGLHCHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVK---------- 212 + F+ + + IE + LGGG + Sbjct: 209 SQIFETEPFADAAEVMINFINNIRQETGHMIEELDLGGGFGIYYSEGDKPKETKEYCDII 268 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + + + +EPG +IV N T T+ I E +D + ++ Sbjct: 269 LNRVNEVCNKLSLKKPILTIEPGRSIVANAGTTLYTIGSIKEIPGVRKYLAIDGGMTDNI 328 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N V G+ C +GDI + + + GD ++ Sbjct: 329 RPALYEAKYEALIANKASGNIESKVTVAGKCCESGDILLQDINLQEAESGDILAVLSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + + SY + N Sbjct: 389 YGFSMSSGYNKNLRPAVVFVRNGEAKVVCKRQSYEELLIN 428 >gi|282916666|ref|ZP_06324424.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus D139] gi|283770471|ref|ZP_06343363.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus H19] gi|282319153|gb|EFB49505.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus D139] gi|283460618|gb|EFC07708.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus H19] Length = 421 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 62/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHHAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G +++ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQTKHLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQDIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E V + H+ L Sbjct: 265 EIKVLGVNAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPGINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|269836759|ref|YP_003318987.1| diaminopimelate decarboxylase [Sphaerobacter thermophilus DSM 20745] gi|269786022|gb|ACZ38165.1| diaminopimelate decarboxylase [Sphaerobacter thermophilus DSM 20745] Length = 441 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 58/401 (14%), Positives = 112/401 (27%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D+ L D + +++ A K + A + L++ S Sbjct: 30 GTPLYIYDEATLRQRADAYRQAFERHYPRARVVYAGKAYLATWLLPLLDEAGLWLDVVSG 89 Query: 61 YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ L F E ++ + A+ ++ + ++ +++ Sbjct: 90 GELYLAVRGGFPAERIVFHGNNKTPEELALALELGVGEVVIDNHYEIELLAQLTAERQVA 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LR+NP V S+ G + + G H Sbjct: 150 LDVLLRVNPGVDAHTHEYRKTGIVDSKFGLLIQSGDAARAVERIRAVPGLRLRGYHAHIG 209 Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK--- 219 + F+ + F + IS GGG + + Sbjct: 210 SQIAETEPFATTINVLFAFAAEMRDRFGVVPDQISPGGGWAIPYESDDPDAAIEPYAAAV 269 Query: 220 --------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 E + +EPG +IV V I + + V VD + ++ Sbjct: 270 AGSALQAAERWGFDPPVLTVEPGRSIVGPAGVAVYRVGAIKDIPGVRRYVCVDGGMADNI 329 Query: 270 PDYLLYQESATIYPN-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 L N + + G+ C +GD+ V+ GD ++ Sbjct: 330 RPPLYGARYTAALANRDGAGSDHAVVTIAGKYCESGDVLIRDVELPTVEPGDLLALPAAG 389 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + R Y D Sbjct: 390 AYCLAMASNYNLALRPAVVAVADGRARLVQRRERYEDLLAR 430 >gi|297564795|ref|YP_003683767.1| diaminopimelate decarboxylase [Meiothermus silvanus DSM 9946] gi|296849244|gb|ADH62259.1| diaminopimelate decarboxylase [Meiothermus silvanus DSM 9946] Length = 394 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 66/369 (17%), Positives = 128/369 (34%), Gaps = 19/369 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+Y D ++ + + +LL A+K G+ L + G + SL E Sbjct: 27 ETPFYAYDLTRIHSRVKALRQSFPR--ARLLYAMKANPRLGILRRLRGWGVGLEAVSLGE 84 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIG 119 V+ + E N K + L + ++++ L + K+ Sbjct: 85 VLRAYRAGYTPEEVLLNGPVKTPAMLEELRGAGLPILGVDSMADLERIARL--LPGAKVI 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVN--GLMFHNNCENKSFL 173 LR+NP + + R S+ G + ++ + GL H +S Sbjct: 143 LRVNPDLPIATHDHLATGRGESKFGILAAEVPASVRRAKQAGLEFLGLHLHLGSALESLE 202 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 F + +E + + ++LGGG + + ++ ++ + Q++LEP Sbjct: 203 DFQEGYRVLEALYESIGPT-QVLNLGGGFGLN---FDPAQVSEAAQKLADTFGAQLWLEP 258 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY--TAM 291 G +V L T V +N ++VD+ + + L + I GP Sbjct: 259 GRYLVAEAGVLLTRVWGTKRTRRNYLLVDAGMMTLLRPMLYGAQHPVIPLYEGPEVRAWD 318 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G C +GD+ K GD ++ Y + + + P + N Sbjct: 319 LAGPVCESGDVLARNVPLPTPKEGDALAILQAGAYGSSMSSNYLDHPRPLEILWNGAEWE 378 Query: 352 KAIREFSYN 360 R S Sbjct: 379 VLRRPQSLE 387 >gi|160916126|ref|ZP_02078333.1| hypothetical protein EUBDOL_02153 [Eubacterium dolichum DSM 3991] gi|158431850|gb|EDP10139.1| hypothetical protein EUBDOL_02153 [Eubacterium dolichum DSM 3991] Length = 428 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 63/397 (15%), Positives = 120/397 (30%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D++K+ L + ++L A K F + + + Q+ S Sbjct: 21 QTPLYIYDEEKISTKLAQFHDLFQSDALETEVLYASKAFTCKALLELVKQHGLSLDVVSG 80 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ + + F E ++ K E + TI+ + + A++ Sbjct: 81 GELYVAKQADFPMERVYFHGNNKSYEELQMALSYGIGTIVVDNAMECELLVQVAKQSGHS 140 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----------NVNGLMFHN 165 K LR+NP V S+ G K E + G H Sbjct: 141 VKALLRVNPGVEAHTHKYIVTAHLDSKFGTSITHKEEIAHMVQTLSAIPNIHFEGFHSHI 200 Query: 166 NCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221 + ++K + + + Q + ++LGGG + Sbjct: 201 GSQIFDANAYVAEIQTLMKFVYELQEEYQIQTKALNLGGGFAAYYTAEDKPIPLSEVCST 260 Query: 222 SEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHV 269 ++ +EPG +IV + V + K V VD + ++ Sbjct: 261 ILDTCSMEKERYQLPLCKVMIEPGRSIVAEAGSTLYRVGFTKQTANKKYVFVDGGMSDNI 320 Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L A + G+ C +GDI E + D + Sbjct: 321 RPALYQAAYACDLANRMNEEKCEKVTIAGKCCESGDILIEDVMLPHAQRNDLLILYTTGA 380 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N + P + ++ SY D Sbjct: 381 YGYSMASNYNRLGRPAVVFVKNGKARIVVKRESYEDM 417 >gi|293977852|ref|YP_003543282.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri DMIN] gi|292667783|gb|ADE35418.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri DMIN] Length = 404 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 64/383 (16%), Positives = 120/383 (31%), Gaps = 23/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D ++ +K+ A K + + + G + S+ Sbjct: 20 GTPLYVYDANQIEFQYKLIKKSFFYIENLKINYACKANPNISILNFFKKLGSGLDTVSIQ 79 Query: 62 EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV +G F + Y EI + I + +S L + + + IG Sbjct: 80 EVEIGLKAGFKPKEIIYTPNGVSLSEIKKAIKAGVLINIDNLSLLEQIGH--ENPNYPIG 137 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFL 173 +RI P++ S+ G K +E+ V G+ H + Sbjct: 138 IRITPNIIGGGNKKISVGHINSKFGISYYQLPNLKRIVENTGIKVEGIHMHTGSDIIDLE 197 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------SV 227 F + F ++++I G G K L F +K ++ Sbjct: 198 VFLQGADILLNVASSFN-ELKYIDFGSGFKVPYHKNDTKTDLDMLGVFFKKKISRVCKNI 256 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY---P 283 +I EPG+ +V+ + V I VDS + P Sbjct: 257 KIVFEPGKFLVSESGYFIVKVNVIKHTTSTVFACVDSGFNHFIRPMFYDSYHQIDNLSNP 316 Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + + V G C + D F ++ GD + F + Y + + +N P+ Sbjct: 317 SGKLRSYTVVGYICES-DTFCVNIKINEIREGDILCFRNAGAYCFSMSSNYNSRYRPSEV 375 Query: 344 VKNVDGTIKAIREFSYNDYYNNL 366 + + + R + D + Sbjct: 376 IIYNNKSFLIRRRENMQDLLKKM 398 >gi|120600508|ref|YP_965082.1| diaminopimelate decarboxylase [Shewanella sp. W3-18-1] gi|120560601|gb|ABM26528.1| diaminopimelate decarboxylase [Shewanella sp. W3-18-1] Length = 414 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 58/382 (15%), Positives = 109/382 (28%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K A + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFNNAVMDHPHLICYAVKANANLAVLNVLARLGSGFDIVSGGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ + ++L + A +L K Sbjct: 86 LARVIEAGGSPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNLVAGRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LRINP V ++ G + V G+ H + Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEIVFARAHALPHLKVKGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + + IE +GGG+ T D + L + Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDDETPPHPDVYAAALLKRLGN 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + + K IVD ++ + L Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + ++ Y + G C GD G+ ++ Y + +N Sbjct: 326 VPRDSEAYEFDIVGPVCETGDFLGKERKLALAAGD-LLAVRSSGAYGFAMASNYNTRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + + + Sbjct: 385 AEVMVDGEHAFLVREREKISQL 406 >gi|15231844|ref|NP_188056.1| diaminopimelate decarboxylase, putative / DAP carboxylase, putative [Arabidopsis thaliana] gi|75306310|sp|Q949X7|DCDA1_ARATH RecName: Full=Diaminopimelate decarboxylase 1, chloroplastic; Short=DAP decarboxylase 1; Flags: Precursor gi|18026845|gb|AAL55653.1|AF227913_1 diaminopimelate decarboxylase [Arabidopsis thaliana] gi|15292779|gb|AAK92758.1| putative diaminopimelate decarboxylase [Arabidopsis thaliana] gi|21594037|gb|AAM65955.1| putative diaminopimelate decarboxylase [Arabidopsis thaliana] gi|21689775|gb|AAM67531.1| putative diaminopimelate decarboxylase [Arabidopsis thaliana] gi|332641990|gb|AEE75511.1| diaminopimelate decarboxylase 1 [Arabidopsis thaliana] Length = 484 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 62/387 (16%), Positives = 123/387 (31%), Gaps = 27/387 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ NL+ + + A+K + + L G S E+ Sbjct: 93 PFYLYSKPQITRNLEAYKEALEGVSSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELR 152 Query: 65 LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGL 120 L F +N ++ + ++ LN + ++ + L Sbjct: 153 LALRAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLL 212 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSF 172 RINP V S+ G + + + + G H Sbjct: 213 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKLVGAHCHLGSTITKV 272 Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F + + ++ ++++GGG+ D ++E Sbjct: 273 DIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLS 332 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +++ NT V + N KN +++D S+ + L Sbjct: 333 RDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELV 392 Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P V G C + D G+ G + D Y ++ + +N Sbjct: 393 SPPPAEAEVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKM 452 Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364 P DG+I IR +++D+ Sbjct: 453 RPPEYWVEEDGSITKIRHAETFDDHLR 479 >gi|9279586|dbj|BAB01044.1| unnamed protein product [Arabidopsis thaliana] Length = 526 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 62/387 (16%), Positives = 123/387 (31%), Gaps = 27/387 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ NL+ + + A+K + + L G S E+ Sbjct: 135 PFYLYSKPQITRNLEAYKEALEGVSSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELR 194 Query: 65 LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGL 120 L F +N ++ + ++ LN + ++ + L Sbjct: 195 LALRAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLL 254 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSF 172 RINP V S+ G + + + + G H Sbjct: 255 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKLVGAHCHLGSTITKV 314 Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F + + ++ ++++GGG+ D ++E Sbjct: 315 DIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLS 374 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +++ NT V + N KN +++D S+ + L Sbjct: 375 RDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELV 434 Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P V G C + D G+ G + D Y ++ + +N Sbjct: 435 SPPPAEAEVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKM 494 Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364 P DG+I IR +++D+ Sbjct: 495 RPPEYWVEEDGSITKIRHAETFDDHLR 521 >gi|239617262|ref|YP_002940584.1| diaminopimelate decarboxylase [Kosmotoga olearia TBF 19.5.1] gi|239506093|gb|ACR79580.1| diaminopimelate decarboxylase [Kosmotoga olearia TBF 19.5.1] Length = 395 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 56/374 (14%), Positives = 123/374 (32%), Gaps = 15/374 (4%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP Y+ ++++ N +D L + + V A+K + + G + Sbjct: 11 VYGTPVYVYFEKEIKNRIDNVLGVFEGINVFPTFAVKANNNPHLLKVIYNKGFGMDVITP 70 Query: 61 YEVMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ E +N + +I + + + ++ ++ +K K + + ++ Sbjct: 71 GELYAAKLAGASPEKLVWNGNGKTETDIKKFIGSVKYVNVDSFEEMEIWKKK--EANVEL 128 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENKSFLC 174 +R+NP++ + G E + GL H + + Sbjct: 129 FIRVNPNIDARTHPHISTGLKKHKFGIPLDKLDEFLKKFPDNRIKGLHVHIGSQITTVAP 188 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE-FSEKYSVQIYLEP 233 F + + + + E I++GGG + R K K ++ E Sbjct: 189 FVEAFEKVSEVSKKYG--FEKINIGGGWGINYDGKELDLLEYRKKVVPLLKNFKEVICEI 246 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGP--YTA 290 G I+ + L VL++ + +V D + + L Sbjct: 247 GRYIIGPSGILLLKVLNLKKTDDKYFVVVDGGMNTLIRPALYGAHHGIKILEPTALSGKI 306 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350 + G C +GD + ++ + E+ Y + N +N P + +G Sbjct: 307 DIVGPLCESGDKLAWDIEIELPEVSSLLYVENAGAYGFSMSNNYNSTLRPAEVLVKENGE 366 Query: 351 I-KAIREFSYNDYY 363 I R + ND + Sbjct: 367 IVLIRRRETLNDLF 380 >gi|260101761|ref|ZP_05751998.1| diaminopimelate decarboxylase [Lactobacillus helveticus DSM 20075] gi|157272210|gb|ABV26736.1| diaminopimelate decarboxylase [Lactobacillus helveticus CNRZ32] gi|260084432|gb|EEW68552.1| diaminopimelate decarboxylase [Lactobacillus helveticus DSM 20075] gi|328468047|gb|EGF39055.1| diaminopimelate decarboxylase [Lactobacillus helveticus MTCC 5463] Length = 438 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 118/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D +++ + + + + VK + A K FA M+ T S Sbjct: 31 GTPLVVYDVEQIRHQIRAFKKVFEEENVKYAVSYASKAFACIAMYQVAAAEGAYTDVVSD 90 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + +++ K + ++ II + ++ Sbjct: 91 GELYTALKANFPVKKISFHGNNKSKSELEMAVKNHIGKIIIDNFHEIKLLDQVLRKHDAK 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P +S + ++ G + + + N+ G+ H Sbjct: 151 IDVMLRITPGISAHTHEYDQTGQVDNKFGFDLESGQADLALEQVLANSRMNMIGIHAHIG 210 Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQR 217 + F ++ E + + I++GGG Sbjct: 211 SQIFELNGFEMAAKKLMEVAENWRSQYGYTAQVINVGGGFGIKYTAEDNPLRPEEFVRAI 270 Query: 218 LKEFSEKYSVQIY------LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 +K ++ + +EPG +IV I V VD + ++ Sbjct: 271 VKTIKKEAKNAAFPLPEIDIEPGRSIVGPAGYNLYITGSRKIVPGHCPYVTVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ + G+ C +GDI + K G ++ D Sbjct: 331 RPALYDAKYETVLATDPRADLTEHVRIAGKYCESGDILADDQALPATKSGSLLAMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I+ S D Sbjct: 391 YGYSMASNYNRNARPAVVFAENGKAQLVIKRESLEDLV 428 >gi|150399267|ref|YP_001323034.1| diaminopimelate decarboxylase [Methanococcus vannielii SB] gi|150011970|gb|ABR54422.1| diaminopimelate decarboxylase [Methanococcus vannielii SB] Length = 436 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 67/400 (16%), Positives = 138/400 (34%), Gaps = 35/400 (8%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK-----LL-LALKCFAAWGMFDTLNQYMDG 54 M +TP Y++ + + + N + + K K + A K + L++ G Sbjct: 29 MYETPLYVMSETQTVKNFERYVESFKEYSEKTGKETIFSFAYKANTNLALTKLLSKLGCG 88 Query: 55 TTSSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA 111 S E+ + E +N K E + +++S L + A Sbjct: 89 ADIVSAGELYIAKISNVPSEKIVFNGNCKLKEEIKMGIETKIRAFNVDSISDLILINETA 148 Query: 112 QKLHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNG 160 +++ K + R+NP+V ++ G + + E + G Sbjct: 149 KEMGKIANVAFRVNPNVDPKTHPKISTGMKKNKFGLDIESGIALQTIKMAEKMENVKIVG 208 Query: 161 LMFHNNC---ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKD 213 + H E F+ + + + + I ++LGGG+ KD Sbjct: 209 IHCHIGSQLTEISPFVEETRKIMDFVVLLKNEGININDVNLGGGLGIPYDKQKVIPVQKD 268 Query: 214 FCQRLKEFSEKYS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEA 267 + + +Y + LEPG +IV + L TV I + +++D+ + Sbjct: 269 LAKAILSVIYEYESKIELPNLILEPGRSIVATSGVLLGTVKHIKDTPVAKWIMIDAGMND 328 Query: 268 HVPDYLL--YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + + Y E + + + G C + D+FG+ +++ D I+ DV Sbjct: 329 MMRPAIYEAYHEITSCTLRSEKEVVSIAGGLCESSDVFGKDRELSKIEVNDTIAILDVGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I+ N +N P + + + + D + Sbjct: 389 YGISMANNYNSRGKPAMVLTSEKEVSIIRERETLADLISK 428 >gi|18416698|ref|NP_568252.1| diaminopimelate decarboxylase, putative / DAP carboxylase, putative [Arabidopsis thaliana] gi|75306321|sp|Q94A94|DCDA2_ARATH RecName: Full=Diaminopimelate decarboxylase 2, chloroplastic; Short=DAP decarboxylase 2; Flags: Precursor gi|15146250|gb|AAK83608.1| AT5g11880/F14F18_50 [Arabidopsis thaliana] gi|22655428|gb|AAM98306.1| At5g11880/F14F18_50 [Arabidopsis thaliana] gi|332004351|gb|AED91734.1| diaminopimelate decarboxylase 2 [Arabidopsis thaliana] Length = 489 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 62/387 (16%), Positives = 123/387 (31%), Gaps = 27/387 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ NL+ + + A+K + + L G S E+ Sbjct: 98 PFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELR 157 Query: 65 LGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGL 120 L F +N ++ + ++ LN + ++ + L Sbjct: 158 LALLAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLL 217 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSF 172 RINP V S+ G + + + + G H Sbjct: 218 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPKELKLVGAHCHLGSTITKV 277 Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F + + ++ ++++GGG+ D ++E Sbjct: 278 DIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLS 337 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +++ NT V + N KN +++D S+ + L Sbjct: 338 RDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELV 397 Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P V G C + D G+ G + D Y ++ + +N Sbjct: 398 SPTPPEAEVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKM 457 Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364 P DG+I IR +++D+ Sbjct: 458 RPPEYWVEEDGSITKIRHAETFDDHLR 484 >gi|257790053|ref|YP_003180659.1| diaminopimelate decarboxylase [Eggerthella lenta DSM 2243] gi|317489497|ref|ZP_07948007.1| diaminopimelate decarboxylase [Eggerthella sp. 1_3_56FAA] gi|325830440|ref|ZP_08163897.1| diaminopimelate decarboxylase [Eggerthella sp. HGA1] gi|257473950|gb|ACV54270.1| diaminopimelate decarboxylase [Eggerthella lenta DSM 2243] gi|316911426|gb|EFV33025.1| diaminopimelate decarboxylase [Eggerthella sp. 1_3_56FAA] gi|325487907|gb|EGC90345.1| diaminopimelate decarboxylase [Eggerthella sp. HGA1] Length = 451 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 123/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 T Y++D+ + ++T L + ++ A K F + S Sbjct: 50 GTALYVMDEADMRTRMETYLAAFRSRYQNSDVVYASKAFLNKEAARIVADEGLCLDVSGG 109 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ + F E + K +A+ + II ++ +L + + A +L Sbjct: 110 GELAIALAAGFPTERIFMHGNNKTPRELREAIQAGVGRIIIDSRIELKRISEIAGELGVV 169 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 + I +RI P V S+ G KD + + + GL H Sbjct: 170 QPIYMRITPGVEADTHQYIRTGCEDSKFGFTMRDDFAYGCVKDVLAAPNVRLAGLHCHIG 229 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + M++ + + + +IE + +GGG+ E Sbjct: 230 SQIFALHSYPEAVEVMVELMARIEEGYGYRIEELDVGGGLGIAYTADDKPASIDEFAETV 289 Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTV--LDISENIKNLVIVDSSVEAHV 269 EPG ++V TV L I+ V VD + ++ Sbjct: 290 TSAVHAACEKFGVPEPRLLTEPGRSLVATAGVTLYTVGILKTLPGIRKYVAVDGGMSDNI 349 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + N + G+ C +GD + +GD ++ Sbjct: 350 RTALYHADYEPVIANKAGQPRTEIVTIAGKHCESGDAVVIDMPMQHPDLGDIVAVFGTGA 409 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +NG P I R +Y D + Sbjct: 410 YCYTMASNYNGQPRPAIVFVKDGQARVTTRRETYEDLMSR 449 >gi|257468497|ref|ZP_05632591.1| diaminopimelate decarboxylase [Fusobacterium ulcerans ATCC 49185] gi|317062756|ref|ZP_07927241.1| diaminopimelate decarboxylase [Fusobacterium ulcerans ATCC 49185] gi|313688432|gb|EFS25267.1| diaminopimelate decarboxylase [Fusobacterium ulcerans ATCC 49185] Length = 434 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 130/400 (32%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + N+ K ++ A K F + + + +Y + S Sbjct: 29 GTPLYIMDQALIEENITKYKNNFKSTKFDTSIVYASKAFLSKAICQLVGKYDIDIDAVSG 88 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK 117 E+ + + K E + + + II + ++ + ++ K+ Sbjct: 89 GELYAIKASGLPMKKVHMHGNNKTNEELEMCLDYEIGSIIIDNEEEIGRLSKICKEKDKQ 148 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + +RIN + ++ S+ GE + ++ E G H Sbjct: 149 VKVMMRINIGIDAHTHEYIKTSKHSSKFGESIFDERITEIVEKIVKDENMEFLGFHCHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + +M+K +K I I+LGGG + ++ Sbjct: 209 SQIFDTKAFHEGIESMVKETKKISEALGIYIPEINLGGGFGVYYTEKDTAIDIEQFMRSM 268 Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 ++ + +EPG +IV N + TV + +D + ++ Sbjct: 269 IEHLEKSIEAEKLEIKKVTIEPGRSIVANAGSTLYTVGGTKTTYGGVKYIFIDGGMTDNI 328 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E +I N V G+ C +GD+ + + GD + Sbjct: 329 RPALYQAEYESIVANKVDAPAEEIVTVAGKCCESGDLIIKDGKLAKAETGDLVLVATTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N P + + +I+ S+ D N Sbjct: 389 YGHSMSNNYNKAPKPAVVFVKDGKSTLSIKRESFEDLIRN 428 >gi|126642667|ref|YP_001085651.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 17978] Length = 374 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 115/371 (30%), Gaps = 26/371 (7%) Query: 21 ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAYNV 79 ++ A+K + + + L + G S E+ ++ Sbjct: 1 MDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGELARVLKAGGDASKIVFSG 60 Query: 80 AYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILAD 135 K N + ++L++ + A +L I LR+NP V Sbjct: 61 LGKTEADIETSLNVGIACFNVESYAELDRIQKVAARLGKKAPISLRVNPDVDAKTHPYIS 120 Query: 136 PNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC---ENKSFLCFSAMLKNIEKE 185 ++ G + G+ H E K F+ + + E Sbjct: 121 TGLKENKFGIPSDAVYETYQYAASLPNLEIVGIDCHIGSQLTETKPFVDALDRVIVMIDE 180 Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 ++ I +GGG+ KD ++ +K EK +++Y+EPG +I N Sbjct: 181 LKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEKLGLKVYMEPGRSISANAG 240 Query: 243 TLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSC 297 L T V L +N I+D+++ + L +T T + G C Sbjct: 241 VLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPVVPRTDTEEKTWDLVGAIC 300 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 GD G+ ++ D ++ Y + +N + + + + Sbjct: 301 ETGDFIGKDRSLA-LQENDLLTVLGAGAYGFVMSSNYNTRGRAAEVMVSGEKSYLIRERE 359 Query: 358 SYNDY--YNNL 366 + L Sbjct: 360 TVESLWEKERL 370 >gi|86133354|ref|ZP_01051936.1| Diaminopimelate decarboxylase [Polaribacter sp. MED152] gi|85820217|gb|EAQ41364.1| Diaminopimelate decarboxylase [Polaribacter sp. MED152] Length = 414 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 113/386 (29%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D K+ + + N +KL A+K + + G + S Sbjct: 14 GSPLYVYDTDKIASQYNRLTNAFSNVKNLKLNYAVKALSNVNILKFFKNLGAGLDTVSYQ 73 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG + Y EI+ V I + +S L F K + Sbjct: 74 EVQLGLTTGINPKNIIYTPNGVSLQEIEQVAKLGVQINIDNLSILEIFGQK--HPEIPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173 +RINP + S+ G + N+NG+ H + Sbjct: 132 VRINPHIMAGGNSKISVGHIDSKFGISIHQVPHIKRVVENTGMNINGIHMHTGSDILDID 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229 F I + I++I G G K+ + ++L + + Sbjct: 192 TFLRASD-ILFDVARQFKNIDFIDFGSGFKVPYKEGDISTDIEQLGIQLSERFNEFCSDY 250 Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESA--T 280 EPG+ +V+ V + + VDS V + Sbjct: 251 GKDITLMFEPGKFLVSEAGVFLAKVNVVKQTTSTVFAHVDSGFNHLVRPMMYDSYHHITN 310 Query: 281 IYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 I G V G C D F + D + F + Y + + +N + Sbjct: 311 ISNPEGRDRYYSVVGYICET-DTFASNRRIAEISEEDVLCFHNAGAYCFSMASNYNSRYL 369 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + + D NN Sbjct: 370 PAEVMLVDGKDYLIRKRQTIQDILNN 395 >gi|227522833|ref|ZP_03952882.1| diaminopimelate decarboxylase [Lactobacillus hilgardii ATCC 8290] gi|227090005|gb|EEI25317.1| diaminopimelate decarboxylase [Lactobacillus hilgardii ATCC 8290] Length = 435 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 126/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP + D + N + + ++ V + A K FA MF +NQ S Sbjct: 31 KTPLVVYDVSSIRNQIHHFQKVFEDNHVDYAVSYASKAFACIAMFQLVNQENAHIDVVSG 90 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F + +++ K E + II + ++ K + H Sbjct: 91 GELYTAIKAGFPMDHVSFHGNNKSVEELEMAVDHQIGVIILDNFHEIALLKQILKDKDAH 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LR+ P VS + S+ G + + + + G+ H Sbjct: 151 INVMLRVTPGVSAHTHEYDQTGQTDSKFGFDLQSGQARKALDEVLADQRMTMLGIHAHIG 210 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKD--------F 214 + F + G + +I + +++GGG + Sbjct: 211 SQIFEVKGFELAATKLIDTLGQWHKEIGYVAKVVNVGGGFGIRYTEKDDPIAPEMFVDAI 270 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K+ + + +++EPG +I TV + V + ++ Sbjct: 271 VKAIKKRARELALPMPAVWIEPGRSIAGPAGYNLYTVGSRKDVPGIRSYVTVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + N T V G+ C +GDI + K GD ++ Sbjct: 331 RPALYQAEYDAVLANDPKAPAKETVRVAGKYCESGDILIQKQALPQTKPGDVLAMLATGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N P + AIR ++ D Sbjct: 391 YGYAMASNYNRNPRPAVIFVENGQDNLAIRRETFEDLIR 429 >gi|326382075|ref|ZP_08203768.1| diaminopimelate decarboxylase [Gordonia neofelifaecis NRRL B-59395] gi|326199501|gb|EGD56682.1| diaminopimelate decarboxylase [Gordonia neofelifaecis NRRL B-59395] Length = 473 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 58/406 (14%), Positives = 122/406 (30%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D+ + G ++ A K F + + + S E Sbjct: 63 GTPLFVYDEADFRSRCADMQSAFGPYG-RVHYASKAFLSTQVAKWIESEGLSLDVCSGGE 121 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F E A + K A + I+ +++ ++ + A + + Sbjct: 122 LAIALRAGFPPERIALHGNNKAESELAAALDAGVGDIVLDSMVEIERLDRLAGERGVVAD 181 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ P V + G + + ++ + GL H + Sbjct: 182 VLVRVTPGVEAHTHEFISTAHEDQKFGFALAGGVALDAVRAVFAADNLRLVGLHSHIGSQ 241 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F ++ + F + I+ + LGGG+ + + L E Sbjct: 242 IFEIDGFELAARRVIGLLADVVAEFGVEKTKQIKVLDLGGGLGISYLESDDPPPVSVLAE 301 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDIS------ENIKNLVIVDS 263 + I +EPG I V + ++ V VD Sbjct: 302 ALVEIVRRESESLNLPMPMIAVEPGRGIAGPAGVTLYRVGTVKDVALDGNTVRRYVSVDG 361 Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L E A+ V G+ C +GDI + + GD + Sbjct: 362 GMSDNIRTVLYDAEYDVRLASRVSEAKAVVCRVVGKHCESGDIVIRDCWLPEDLAPGDLL 421 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + +A N +R + D+ + Sbjct: 422 VVGATGAYCYSMSSRYNMVPRAAVATVNDGRARLMLRRETVEDFLS 467 >gi|302873537|ref|YP_003842170.1| diaminopimelate decarboxylase [Clostridium cellulovorans 743B] gi|307688283|ref|ZP_07630729.1| diaminopimelate decarboxylase [Clostridium cellulovorans 743B] gi|302576394|gb|ADL50406.1| diaminopimelate decarboxylase [Clostridium cellulovorans 743B] Length = 430 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 122/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID++ + N + K ++ A K F M +N+ S Sbjct: 29 GTPLYVIDEKLVRNTCKSYYDAFKVKEGKNRVAYAGKAFLPMEMCRIINEEGLCLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLH-- 115 E+ F E ++ K E + N T + + + ++ A++ + Sbjct: 89 GELFTAYKAGFPLEKVFFHGNNKSHEEIKLGINLGVGTFVVDNLYEIELIDKYAKEKNVV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + I RI P + + S+ G K E E + G+ H Sbjct: 149 QNIYFRITPGIEAHTHDYIQTGQIDSKFGFTIDSEALDFAIKTAKEKENIKLIGIHAHIG 208 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---------- 212 + + M ++ F I + LGGGI D Sbjct: 209 SQIFDIEPYGDLVRLMFTLAKRIRDEFDIDITDVDLGGGIGVYYTDEDEPKSAQQFCETI 268 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + + + ++ +EPG +++ N + T+ I + V + ++ Sbjct: 269 VNKAEEIAKELRMEVPRLVIEPGRSVIGNAGSTLYTIGAIKSVLDIRKYVSIDGGMTDNI 328 Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + V G+ C +GDI + V GD + Sbjct: 329 RPALYNAAYECALANRMNDEEKEVVTVAGKCCESGDILLKDVEINKVNSGDILVVPTTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N + T R SY + Sbjct: 389 YGYSMSNNYNKTPKAAVVSVMDGNTKVMCRRQSYEELIQ 427 >gi|51892948|ref|YP_075639.1| diaminopimelate decarboxylase [Symbiobacterium thermophilum IAM 14863] gi|51856637|dbj|BAD40795.1| diaminopimelate decarboxylase [Symbiobacterium thermophilum IAM 14863] Length = 443 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 61/398 (15%), Positives = 117/398 (29%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D++ + N + + + A K F M + Q S Sbjct: 30 GTPLYVMDEELIRQNCRAYVAAFRDHYPDFDVAYASKAFLCTAMAALVAQEGLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F + ++ K + A+ + + +++ +L A + Sbjct: 90 GEIATALQAGFPMDRTYFHGNNKTAEEIRLALEAGVGRFVVDSLHELELLNRLAGERGTT 149 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 LR+ P V + S+ G + ++++ + G H Sbjct: 150 ARALLRVTPGVEAHTHEYISTGQLDSKFGIPIEGGQALDAARAALQADHVELLGFHCHIG 209 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + ML +SLGGG+ + L Sbjct: 210 SQIFDLTGYRVAADRMLAFAAAVREETGFTPSELSLGGGLGVRYVEGDRPLPPADLVACL 269 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + ++ +EPG +IV T TV I E VD + ++ Sbjct: 270 AEAVRSGAAERALPLPKLIVEPGRSIVAEAGTTLYTVGTIKEIPGVRTYLSVDGGMGDNI 329 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVK-IGDRISFEDVA 324 L + N V GR C +GD+ GD ++ Sbjct: 330 RPALYHARYECAVANKLDSERTRIVTVVGRYCESGDVLLTDAAVAADVAPGDLLAVFATG 389 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 YN + + +N P + +R ++ D Sbjct: 390 AYNYSMASRYNRFPTPAVVFVRDGRADLVVRRETFADM 427 >gi|254414419|ref|ZP_05028185.1| diaminopimelate decarboxylase [Microcoleus chthonoplastes PCC 7420] gi|196178649|gb|EDX73647.1| diaminopimelate decarboxylase [Microcoleus chthonoplastes PCC 7420] Length = 469 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 113/398 (28%), Gaps = 36/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ + +L A K + + G S Sbjct: 60 GSPLYILDEVTVRTACRQYRDAFARYYSGDTLVLYASKAWNCLAICAIAASEGLGVDVVS 119 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK- 116 E+ E + ++ K + I+ + +L D AQK Sbjct: 120 GGELYTALEAGVPADKLYFHGNNKSIAELQLAIESHCTIVVDNQLELETLADLAQKTSPD 179 Query: 117 ---KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNN 166 +I +RI P + S+ G ++ I + GL H Sbjct: 180 TQVRIMIRITPGIECHTHDYIRTGHLDSKFGFDPHTLDNVFAFISQNPILDCIGLHAHIG 239 Query: 167 CENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----- 218 + + + ++ F I+ +++GGG+ + Sbjct: 240 SQIFESQPHKDLGAVLVDYLQKAAQFNLSIQELNVGGGLGIRYTEDDDPPTIDAWVKGVC 299 Query: 219 ------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVP 270 + ++ EPG +I+ T+ E + VD + + Sbjct: 300 EAVVNACNQQQLPLPRLLSEPGRSIIGPACVTAYTIGSRKEIPQTRTYLAVDGGMSDNPR 359 Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + N T + G+ C +GDI + + GD + Y Sbjct: 360 PITYQSVYRPVVANRMSAPITETVTIAGKHCESGDILLKDAQLPETQPGDLLVIMGTGAY 419 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + +N + P + ++ +Y D Sbjct: 420 NYSMASNYNRVPRPAAVLVKDGTAELIVQRETYQDLIR 457 >gi|111018490|ref|YP_701462.1| diaminopimelate decarboxylase [Rhodococcus jostii RHA1] gi|110818020|gb|ABG93304.1| diaminopimelate decarboxylase [Rhodococcus jostii RHA1] Length = 473 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 58/406 (14%), Positives = 120/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + K+ A K F + + +S E Sbjct: 64 GTPLFVVDEDDFRSRCRDMARAF-GPTAKVHYASKAFLCGEIARWVADEGLSLDVASGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E A + K AV + I+ ++ +++++ A + + Sbjct: 123 LAVALHAGFPAERIAMHGNNKSVAELNAAVSARVGHIVLDSATEIDRLDKVAAEAGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + + + + GL H + Sbjct: 183 VLIRVTVGVEAHTHEFISTAHEDQKFGFSLAGGKAIDAVRRVFAAGNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + F + I I LGGG+ + +L Sbjct: 243 IFDVDGFELAAHRVIGLLRDVVAEFGVEKTAQISIIDLGGGMGISYVPSDDPPPVDQLAA 302 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDIS------ENIKNLVIVDS 263 + +EPG AI T V I + V VD Sbjct: 303 KLGDIVRNESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTIKDVTVGANLTRRYVSVDG 362 Query: 264 SVEAHVPDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L E + + P + V G+ C +GD+ + + GD + Sbjct: 363 GMSDNIRTALYQAEYEAKLVSRVSDAAPVVSRVVGKHCESGDVVIRDTWMPEDIDAGDLL 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + D + Sbjct: 423 AVAATGAYCYSMSSRYNLLARPAVVAVRDGQSRVILRRETVEDLLS 468 >gi|330813484|ref|YP_004357723.1| diaminopimelate decarboxylase [Candidatus Pelagibacter sp. IMCC9063] gi|327486579|gb|AEA80984.1| diaminopimelate decarboxylase [Candidatus Pelagibacter sp. IMCC9063] Length = 411 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 130/385 (33%), Gaps = 24/385 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+YL ++L N + K+ + A+K L + G S+ E+ Sbjct: 27 TPFYLYSFEQLEYNFNFFHKSFKSINPLICFAVKSNTNLFFLKKLKKLGSGADVVSIGEL 86 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--KI 118 L + ++ K E + + I + +++N+ A+ K I Sbjct: 87 QLALKAGINAQKIVFSGVGKTKEELSYAVSKKILLINTESENEINEIIKIARSKKKIVTI 146 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKS 171 G+R+NP++S + + G ++ + GL H + K Sbjct: 147 GIRLNPNISAKTNKKISTGKKSDKFGISLDRCFKILKKNSNNKNIKIEGLSVHIGSQIKE 206 Query: 172 FLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK 224 F L I K + I ++ LGGG+ ++ +K + + F++ Sbjct: 207 LAPFKKTLDVINKFLLKLKNEGITISYLDLGGGMGIPYSALETEFDLKKYANLVHAFNKN 266 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283 + +I EPG + NT L + V + E ++ D+++ + L + + Sbjct: 267 HKCKIIFEPGRYMSANTALLVSKVTYVKEIQDRNFVILDAAMNDLMRPALYGAKHDILPI 326 Query: 284 NTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 G C + D F ++ +K G + F +V Y + + +N + Sbjct: 327 QKDKKKFNRKIEFVGPICESTDKFITYNNYPRLKEGGYVCFTNVGAYGRSLSSNYNVRPL 386 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 N D Sbjct: 387 AAEIAINKKSYTIIRPRQKLKDLIK 411 >gi|313893288|ref|ZP_07826863.1| putative diaminopimelate decarboxylase [Veillonella sp. oral taxon 158 str. F0412] gi|313442184|gb|EFR60601.1| putative diaminopimelate decarboxylase [Veillonella sp. oral taxon 158 str. F0412] Length = 418 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 65/393 (16%), Positives = 122/393 (31%), Gaps = 29/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ ++ N+ + + N G K A+K + L + G SSL Sbjct: 21 PTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRVLQKLGVGADCSSLA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L G + E L I + ++ + + L Sbjct: 81 ELLLCEKVGITGHDIMFTSNDTPYVEYKKALDMGAIINLDDITHIEYLEKHHGSLPDTFC 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174 +R NP ++ G + E+ + V H + Sbjct: 141 VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIHTMVVSNELDID 200 Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224 +E+I LGGG+ K + L + E+ Sbjct: 201 GLVGTAELCFNLAVDIKNELGINVEFIDLGGGVGVAYKPEQTPVDFKALSKGVEEAYNRI 260 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 V + E G + L +T + + ++ + +DS + + L Sbjct: 261 LVANGLNDVALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDSCMANLMRPALYGSYH 320 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGDRI D + + + Sbjct: 321 HITVMGKEDAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRIIIHDAGAHGHSMGFNY 380 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + + DG++ IR +Y+D + L Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413 >gi|222824355|ref|YP_002575929.1| diaminopimelate decarboxylase [Campylobacter lari RM2100] gi|222539576|gb|ACM64677.1| diaminopimelate decarboxylase [Campylobacter lari RM2100] Length = 401 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 65/382 (17%), Positives = 119/382 (31%), Gaps = 21/382 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ D K+ K ++ A+K + + L G S E+ Sbjct: 12 TPFYIYDFDKIKERFLLLKEAFKARKSQIFYAVKANSNLSVLKLLVSLDSGFDCVSAGEI 71 Query: 64 MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ K D A+ N + + ++ + A++ K + Sbjct: 72 YRALKAGAKNYKIIFSGVGKSADELKYALEQNILYVNLESYEEMLLLEQIAKESQKIARI 131 Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171 R+NP+V ++ G + + I + + FH + Sbjct: 132 SIRVNPNVDAKTHPYISTGLHENKFGVDIESAKKMYIYAKNSQFLDPVSVHFHIGSQILD 191 Query: 172 FLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKY 225 + K + I++ +GGG+ KD + D+ Q + + Sbjct: 192 ISSIHEASVIVAKLVKELLVLKINIKFFDIGGGLGVCYKDEQEPNLYDYAQGILASLQGL 251 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 V I +EPG +V N T VL + K VIVD ++ + L + Sbjct: 252 DVCIGMEPGRFLVANAGEFITKVLYEKFNDKKRFVIVDGAMNDLLRPSLYSAYHEVKLLS 311 Query: 285 TGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + G C +GD + K GD I + Y + + +N N Sbjct: 312 ENKEESLCDIVGGVCESGDFLAKDRKLAKTKAGDLIIVKSAGAYGFSMSSNYNTRNRVCE 371 Query: 343 AVKNVDGTIKAIREFSYNDYYN 364 + SY D Sbjct: 372 LACENGMVRMIRKRESYEDQIA 393 >gi|254718034|ref|ZP_05179845.1| diaminopimelate decarboxylase [Brucella sp. 83/13] gi|265982981|ref|ZP_06095716.1| diaminopimelate decarboxylase [Brucella sp. 83/13] gi|306837594|ref|ZP_07470465.1| diaminopimelate decarboxylase [Brucella sp. NF 2653] gi|264661573|gb|EEZ31834.1| diaminopimelate decarboxylase [Brucella sp. 83/13] gi|306407301|gb|EFM63509.1| diaminopimelate decarboxylase [Brucella sp. NF 2653] Length = 421 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 115/389 (29%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ + + + + + ALK + + L + G + S Sbjct: 25 VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLAALAKLGAGADTVSEG 84 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKF--KDKAQKLHK 116 E+ ++ K + +L + A Sbjct: 85 EIRRALAAGIPANRIVFSGVGKTPREMDFALEARIYCFNVESEPELEILSARAVAAGKVA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 + LRINP V + ++ G + + NV G+ H + Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221 F + KE I + +GGG+ P + + + + Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAEIVAKH 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278 + ++ EPG IV N L T V+ + E + KN VIVD+++ + L Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 N A G C GD G GD I+ Y + +N Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + +Y + Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413 >gi|227509663|ref|ZP_03939712.1| diaminopimelate decarboxylase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190879|gb|EEI70946.1| diaminopimelate decarboxylase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 435 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 126/399 (31%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP + D + N + + ++ V + A K FA MF +NQ S Sbjct: 31 KTPLVVYDVSAIRNQIHHFQKVFEDNHVDYAVSYASKAFACIAMFQLVNQENVHIDVVSG 90 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F + +++ K E + II + ++ K + H Sbjct: 91 GELYTAIKAGFPMDHVSFHGNNKSVEELEMAVDHQIGVIILDNFHEIALLKQILKDKDAH 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LR+ P VS + S+ G + + + + G+ H Sbjct: 151 INVMLRVTPGVSAHTHEYDQTGQTDSKFGFDLQSGQARKALDEVLADQRMTMLGIHAHIG 210 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKD--------F 214 + F + G + +I + +++GGG + Sbjct: 211 SQIFEVKGFELAATKLIDTVGQWHKEIGYVAKVVNVGGGFGIRYTEEDDPIAPEMFVDAI 270 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K+ + + +++EPG +I TV + V + ++ Sbjct: 271 VKAIKKRAGELALPMPAVWIEPGRSIAGPAGYNLYTVGSRKDVPGIRSYVTVDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + N T V G+ C +GDI + K GD ++ Sbjct: 331 RPALYQAEYDAVLANDPKAPAKETVRVAGKYCESGDILIQKQALPQTKPGDVLAMLATGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N P + AIR ++ D Sbjct: 391 YGYAMASNYNRNPRPAVIFVENGQDNLAIRRETFEDLIR 429 >gi|302554157|ref|ZP_07306499.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM 40736] gi|302471775|gb|EFL34868.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM 40736] Length = 463 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 65/398 (16%), Positives = 123/398 (30%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + A K F + + L++ S E Sbjct: 63 GTPAYVLDEADFRARARAWRTAFGQ-DADVFYAGKAFLSRAVVRWLHEEGLNVDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + E A++ K D AV + I+ ++ ++ + AQ L +K Sbjct: 122 LATALSAGMPAERIAFHGNNKSVDEITRAVEAGVGHIVLDSFQEIVRVAHIAQGLGKRQK 181 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +RI V + G + ++ + + G+ H + Sbjct: 182 VLIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALQLDGLELVGIHSHIGSQ 241 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F ++ ++ I LGGG+ + + + Sbjct: 242 IFDMSGFEVAAHRVVSLLKDVRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKSLTE 301 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +I +EPG AIV T V I + V VD + ++ Sbjct: 302 IVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLDGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + + P A V G+ C +GDI + F V GD ++ Y Sbjct: 362 ALYDAEYSVALVSRTSDAAPMLARVVGKHCESGDIVVKDAFLPADVAPGDLVAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + +R + D Sbjct: 422 CRSMASNYNHVLRPPVVAVQGGEARAIVRRETEEDLLR 459 >gi|311745312|ref|ZP_07719097.1| diaminopimelate decarboxylase [Algoriphagus sp. PR1] gi|126577845|gb|EAZ82065.1| diaminopimelate decarboxylase [Algoriphagus sp. PR1] Length = 410 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 124/385 (32%), Gaps = 25/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D K+ + + T +K+ A K + + + S+ E Sbjct: 23 GTPVYVYDGDKITSQIKTLQQAFSKVPLKIKYATKALTNVNILKVVKLAGGEVDAVSVQE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V L E F E Y EI V+ I + + L F + + Sbjct: 83 VRLCLEAGFKAEDIMYTPNGVSLEEIKEVVELGAMINLDNLPVLELFGQT-YGHEVPVCI 141 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFLC 174 RINP + S+ G + + ++ V GL H + Sbjct: 142 RINPHIMAGGNAKISVGHIASKFGVSIHQLDEILELVKKYNIQVTGLHLHTGSDILDAEV 201 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV--------KDFCQRLKEFSEKYS 226 F + E +++++ GGG K+ V + +F EKY Sbjct: 202 FLKSGNVL-FEAALKFPELKFLDFGGGFKVGYKEGDVVTDMMEVGNRVSEAFLKFCEKYG 260 Query: 227 V--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES---AT 280 +++LEPG+ +V+ +L + + + + V+S + + + Sbjct: 261 KKLELWLEPGKFVVSEAGSLLVQANVVKKTPQITFVGVNSGLNHLIRPMMYDAYHDVYNL 320 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P V G C D V++GD ++ ++ Y I+ + +N P Sbjct: 321 SNPEGEEKKYNVVGYICET-DTIAAERDIAEVRMGDFLAIKNAGAYGISMASNYNSRLRP 379 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + + D N Sbjct: 380 AEVLIWEGKARLIRKREEFEDLLRN 404 >gi|313896962|ref|ZP_07830509.1| putative diaminopimelate decarboxylase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974409|gb|EFR39877.1| putative diaminopimelate decarboxylase [Selenomonas sp. oral taxon 137 str. F0430] Length = 425 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 61/393 (15%), Positives = 116/393 (29%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D+ K+ N G + A+K + L++ GT SS+ Sbjct: 21 PTPFHIYDEGKIRANCRRLREAFAWAPGFREHFAVKALPNPRIVQLLHEEGAGTDCSSIA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ GE + + I + ++ L+ A + Sbjct: 81 ELLISEAAGVTGEEIMLTSNDTPFDEFQKSIELGAVINLDDITHLDYMAKHAGLPE--VL 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFHNNCENKSFLCF 175 + ++ G + + V H + Sbjct: 139 SFRYNPGDTIEGNDIIGKPVEAKYGLTHAQMLEGYARAREMGVRRFGLHTMVISAELRTE 198 Query: 176 ------SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 M + + +E+++LGGG + + E+ +I Sbjct: 199 AFLLTARIMFELAVELKEKLGIHVEFVNLGGGFGIPYRPEEDPVDFAAVGAGIERLYHEI 258 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E G A+ + L +TVL K V +DS + + L Sbjct: 259 MRPAELGDVAIRTESGRAVTGDAGWLVSTVLHKKNTYKKYVGLDSCMANLMRPALYGAYH 318 Query: 279 ATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGD + D + + Sbjct: 319 HITVLGKEHAPADHVYDVTGSLCENNDKFAVDRALPQIDIGDIVVIHDTGAHGSAMGFNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + + DGT++ IR + +DY+ L Sbjct: 379 NGKLHCAELLLHEDGTVELIRRAQTLDDYFATL 411 >gi|225377000|ref|ZP_03754221.1| hypothetical protein ROSEINA2194_02644 [Roseburia inulinivorans DSM 16841] gi|225211136|gb|EEG93490.1| hypothetical protein ROSEINA2194_02644 [Roseburia inulinivorans DSM 16841] Length = 426 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 62/391 (15%), Positives = 129/391 (32%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N + N G + A+K + + L +Y G SSL Sbjct: 20 PTPFHLYDEKGIRENAEAVKEAFAWNPGFREYFAVKATPNPFILNILKEYDCGCDCSSLT 79 Query: 62 EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML + F G+ ++ E I + + ++ + + + I Sbjct: 80 ELMLADSQGFDGQHIMFSSNDTPAEEFAFADELGAIINLDDFTHIDFLEQTIGHIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---------SEIKNVN-GLMFHNNCEN 169 R NP + N ++ G + IE ++ ++ L + Sbjct: 140 CRYNPGGVFKMSNGIMDNPGDAKYGFTHEQIIEGFKILKEKGAKYFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--- 226 + + + + I++I+L GG+ + + + + + E + Sbjct: 200 YYPKLAHQLFELVVELRDKTGCDIKFINLSGGVGIPYRPDQIPNDIRVIGEGVREAFEEI 259 Query: 227 --------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + IY E G ++ L T + K + VD+ + + Sbjct: 260 LVPAGLGDISIYSEMGRFMLGPYGCLVTKAIHEKHTYKEYIGVDACAANLMRPAIYGAYH 319 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + +GD + D + + + Sbjct: 320 HITVMGKENEPCDHKYDVTGSLCENCDKFAIDRMLPKIDMGDLLVIHDTGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+ + IR + +DY+ Sbjct: 380 NGRLRSAEILLKEDGSTQLIRRAETPDDYFA 410 >gi|172036266|ref|YP_001802767.1| diaminopimelate decarboxylase [Cyanothece sp. ATCC 51142] gi|171697720|gb|ACB50701.1| diaminopimelate decarboxylase [Cyanothece sp. ATCC 51142] Length = 476 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 50/405 (12%), Positives = 116/405 (28%), Gaps = 43/405 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L + +++ A K ++ + + + G S Sbjct: 62 GSPLYILDEMTLRTACRQYRDNFQTYYKGESQVIYASKAWSCLAVVGVIARENLGFDVVS 121 Query: 60 LYEV---MLGH-------EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 E+ ++ + + + + E+ + TII + +L Sbjct: 122 GGELYTTQKALTQLGYSCQEIAKKIYFHGNNKSEAELKEAIKVGCTIIVDNWLELQTLAQ 181 Query: 110 K---AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVN 159 L I +R+ P + S+ G + + Sbjct: 182 LGNDTPNLTIPILIRLTPGIECHTHEYIRTGHLDSKFGFDPNQLEAVFTYISQQTSLDCR 241 Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ 216 GL H + + + + + + +++GGG+ + + Sbjct: 242 GLHAHIGSQIFERQPHQDLAGVLVEWLKIGREYGLNLSELNIGGGLGICYTEEDDPPSIE 301 Query: 217 RL-----------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS- 264 + E ++ EPG +++ + TV E + + Sbjct: 302 EWVKAVSEAVMKACQRCEIDLPKLIAEPGRSLIGSACVTAYTVGSRKEIPELRTYIAVDG 361 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + + A T + G+ C +GDI + GD + Sbjct: 362 GMSDNPRPITYQSLYRVALANRMSAEISETVTIAGKHCESGDIVIKDAQLPQTHPGDILV 421 Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + P + N +R +Y+D Sbjct: 422 IMGTGAYNYSMASNYNRLPRPAAVMVNQGEANLIVRRETYDDLIR 466 >gi|260435338|ref|ZP_05789308.1| diaminopimelate decarboxylase [Synechococcus sp. WH 8109] gi|260413212|gb|EEX06508.1| diaminopimelate decarboxylase [Synechococcus sp. WH 8109] Length = 459 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 48/396 (12%), Positives = 112/396 (28%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ + + + A K ++ M G + S Sbjct: 52 GTPLYVLDEATVRATCRAYRQALEKHYAGPSLPIYASKANSSLVMSSLAASEGLGLDAVS 111 Query: 60 LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115 E++ GE + D E+ +N TI+ + L++ + A Sbjct: 112 AGELLTALHGGMPGERMVLHGNNKSDEELLLAYANKVTIVVDNQHDLDRLAELVPAGAEP 171 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 ++ LR P + S+ G + + GL H + Sbjct: 172 ARLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQVEPVLRSLVGQPWSQLTGLHAHIGSQ 231 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224 + + + + +++GGG+ + ++ + + Sbjct: 232 IFELEPHQDLAAVMADKLKLARDLGHPVSDLNVGGGLGIRYVESDDPPSIEQWIQVVAEA 291 Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 ++ EPG ++V +V +D + + Sbjct: 292 VTSACQERGLELPRLMCEPGRSLVATAGVTLYSVGSRKTIPNVRTYVAIDGGMSDNPRPI 351 Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + + + G+ C +GD+ + + GD ++ YN Sbjct: 352 TYQSLYTCCLADRPLAKPDESVNLVGKHCESGDVLLKNLALPTTESGDIVAVFATGAYNA 411 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + + + +D Sbjct: 412 SMSSNYNRIPRPAAVLVHDGAAELVQKREQPDDLLR 447 >gi|262341097|ref|YP_003283952.1| diaminopimelate decarboxylase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272434|gb|ACY40342.1| diaminopimelate decarboxylase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 412 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 109/386 (28%), Gaps = 27/386 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D K+ K + A K + L Q G + S+ Sbjct: 24 GTPLYIYDSCKIKKQYIKMKNAFGKIKNFIINYACKANTNLNILKFLQQLGSGLDTVSIQ 83 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG F + + + + I + +S L +F + + IG Sbjct: 84 EVELGLKAGFHPKKIIFTPNCVSIQEIKKAVDFGVRINLDNLSILEQFGE--YYPNYSIG 141 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFL 173 +RINP + S+ G + + G H + Sbjct: 142 IRINPHIMAGGNSKISVGHIDSKFGISYYQIPHMKRILKNTGLKIEGFHMHTGSDISDIK 201 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229 F I + +++I G G K +K L + Sbjct: 202 SFLE-GAKILFQTAIDFPNLDYIDFGSGFKVPYKKNDIKTNLTSLSHSITEKFKNFCQSY 260 Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 EPG+ +V+ + V I + S H + Y I Sbjct: 261 GSQIALIFEPGKFLVSESGYFLVHVNVIKHTTSTVFAGVDSGFNHFLRPMFYNAYHCIEN 320 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + P V G C + D FG + ++ GD + ++ Y + + +N Sbjct: 321 ISNPNGRFRFYTVVGYICES-DTFGLNRKIQEIREGDILCMKNAGAYCFSMSSNYNSRYR 379 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P + + D N Sbjct: 380 PAEVFIFQGKDFLIRKRETMQDLLRN 405 >gi|297202382|ref|ZP_06919779.1| diaminopimelate decarboxylase [Streptomyces sviceus ATCC 29083] gi|197710099|gb|EDY54133.1| diaminopimelate decarboxylase [Streptomyces sviceus ATCC 29083] Length = 463 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 64/398 (16%), Positives = 123/398 (30%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + A K F + + L++ S E Sbjct: 63 GTPAYVVDEADFRARARAWRTAF-GHDADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + A++ K + AV S I+ ++ ++ + AQ L K+ Sbjct: 122 LATALSAGMPADRIAFHGNNKSTQEITRAVESGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 +RI V + G + ++ + + G+ H + Sbjct: 182 VQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALKLDGIELIGIHSHIGSQ 241 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F ++ ++ I LGGG+ + + + Sbjct: 242 IFDMSGFEVAAHRVVGLLKDVRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALTE 301 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +I +EPG AIV T V I + V VD + ++ Sbjct: 302 IVTRECEAARLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLDGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + P A V G+ C +GDI + F + GD I+ Y Sbjct: 362 ALYDAEYTVALVSRTSDAEPMLARVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + + + +R + D Sbjct: 422 CRSMASNYNHVLRPPVVAVHDGESRVIVRRETEEDLLR 459 >gi|260655042|ref|ZP_05860530.1| diaminopimelate decarboxylase [Jonquetella anthropi E3_33 E1] gi|260630153|gb|EEX48347.1| diaminopimelate decarboxylase [Jonquetella anthropi E3_33 E1] Length = 452 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 53/392 (13%), Positives = 115/392 (29%), Gaps = 30/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D+ +L + K + A K F M ++ G SL E Sbjct: 52 GTPLYVFDEAELRRRCRRLVESVKKYDADVYYAGKAFLPLAMAQLVSSEGMGLDVVSLGE 111 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118 + L + ++ A+ I+ ++ +L A+ Sbjct: 112 LALALSAGISAGRIELHGNAKTEELLSRALRLGVGRIVVDSADELELLGRLAKNEKTPPK 171 Query: 119 -GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENK- 170 LR++P ++ + G + + + + GL H + Sbjct: 172 ILLRVSPGIAAGAHHAIQTATDDCKFGFSPAQLVHAVKRAADLPVVLAGLHVHLGSQIDR 231 Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---------VKDFCQRL 218 F M+ + + + + LGGG + P + + Sbjct: 232 LEPFFEGVQTMVDLLASLKNACGFEADEMDLGGGFAVRSPEGPLDAGDFIEKICLRAKSA 291 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQ 276 + ++ EPG + + V + E + + + L Sbjct: 292 SSAAGLRLPRLSFEPGRWVSSPACVTVYRVQSVKETTSGRIYAALDGGMTDNPRPCLYGA 351 Query: 277 ESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + + ++ T + G C +GD+ ++ GD ++ D Y + Sbjct: 352 PYSPVLVSSADERKEGTVTLAGCCCESGDVLVSDAVMPELRRGDLVALPDTGAYTYSMFM 411 Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 +NG P + + +R ++ D Sbjct: 412 TYNGAFRPAVVFVSSGTARLVVRRWNEGDLLK 443 >gi|325528845|gb|EGD05893.1| diaminopimelate decarboxylase [Burkholderia sp. TJI49] Length = 412 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 123/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + + SL E Sbjct: 16 GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNLHILKLMREAGACVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + ++A Sbjct: 71 IERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARVGEQA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + I+ IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVDHYFKQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 ++V+I +EPG +V TL T V ++ K+ + +D+ + + A Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 307 Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G C +GD+F + +IGD + D Sbjct: 308 VSVHAHDGALPEGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRRLAQPQIGDLLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + ++ Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIDELLA 407 >gi|257126124|ref|YP_003164238.1| diaminopimelate decarboxylase [Leptotrichia buccalis C-1013-b] gi|257050063|gb|ACV39247.1| diaminopimelate decarboxylase [Leptotrichia buccalis C-1013-b] Length = 436 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 73/401 (18%), Positives = 132/401 (32%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y++D++ + +D K ++ A K F + GM + S Sbjct: 30 KTPLYVMDQEFIETTIDKMKKAFKSSRFNTRIAYAGKAFLSTGMIKLVESKGLDLDVVSG 89 Query: 61 YEVMLG-HEKFG-GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F + H + EI+ AV DTI+ + +++K + ++ KK Sbjct: 90 GELYTAYKAGFPMNKVHLHGNNKLVNEIEMAVDFGIDTIVVDNEDEIDKIERICREKGKK 149 Query: 118 IGLRINPSVS--YSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + + + S+ G K +SE G H Sbjct: 150 QAVLVRIDPGIEAHTHHYIKTSGLTSKFGISLFQDNLFDIIKRLNDSEWIEFKGFHTHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + F L I K + +++GGG K+ + + Sbjct: 210 SQIFQSAFFIFALDEIFKYLDKLKKELGIVVHTVNMGGGFGVYYKEGDDPKPIEEVLSEI 269 Query: 223 EKYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 Y+ + +EPG +IV N T V I E + K V +D + ++ Sbjct: 270 ITYTEAMEIKYQIGFKELCIEPGRSIVGNAGTTLYEVGGIKETVGGKTYVFIDGGMSDNI 329 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVA 324 L E N T + G+ C +GDI E ++GD ++ Sbjct: 330 RTALYQAEYEAGVVNKINDTDVKDVTLAGKLCESGDIIIEKGKLPKSTEVGDIVAVTTTG 389 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +N + P + A++ + +D N Sbjct: 390 AYCYTMSSNYNRMMRPAVVFVKDGKAKVAVKRETLDDLIRN 430 >gi|226356218|ref|YP_002785958.1| diaminopimelate decarboxylase [Deinococcus deserti VCD115] gi|226318208|gb|ACO46204.1| putative Diaminopimelate decarboxylase (DAP decarboxylase) [Deinococcus deserti VCD115] Length = 379 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 60/369 (16%), Positives = 111/369 (30%), Gaps = 21/369 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D +L L ++ A+K + L G S E Sbjct: 16 GTPLYVYDAAELDAALGRVRAAFG--DARVHYAMKANPNLHLLRRLQAAGVGFECVSPGE 73 Query: 63 VMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + G + A D E A T + + ++ + + Sbjct: 74 IARAEHLGVAGEKLIINGPAKSDAEYAAGARLGATFVVDREEEVGLL-----PSGSRALV 128 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 R+NP++S S S+ G + + + GL H + Sbjct: 129 RVNPALSVSTHDHLATGSEGSKFGVTLEQAPRVLEALRTAGHTALGLHVHIGSAIRDAAD 188 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 F+A + + + GGG + + + + Q+++EPG Sbjct: 189 FTAAFGRLSDLRSQTGP-LAVLDAGGGWGLGA---DLPGIAREAHAAAAVFGAQLWVEPG 244 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--YTAMV 292 +V TL T V+ + V+VD+ + + L E G V Sbjct: 245 RYLVAQAGTLLTRVVGTKRTGRPFVLVDAGMTELMRPMLYGAEHPVTPLWEGAGHSCWDV 304 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G +C +GD+ GD ++ + Y + + P + N D Sbjct: 305 AGPACESGDLLARAVTLPTPSRGDLLAIGEAGAYGAAMSGTYLTRSRPAEVLWNGDEWHL 364 Query: 353 AIREFSYND 361 + + D Sbjct: 365 IRKRETPQD 373 >gi|289523768|ref|ZP_06440622.1| diaminopimelate decarboxylase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503460|gb|EFD24624.1| diaminopimelate decarboxylase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 425 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 60/399 (15%), Positives = 114/399 (28%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ K + + + A + A K F M + + G S Sbjct: 20 GTPLYVVSKSIIKDRCREIRDDFLNRYANSRAYYAGKAFLTIAMCRLIKKEGLGLDVVSG 79 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E L + F + K + I+ + +L+ + A Sbjct: 80 GEFHLALKANFPAANIVLHGNNKLRQEIETAIDRGVGRIVVDWEGELDLIDEIASSKGRR 139 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168 + LR+ P V S+ G + + E + GL FH + Sbjct: 140 APVLLRVTPEVEALTHKYIQTGHRGSKFGIPLERVPYLAEKSLSMEHIALKGLHFHLGSQ 199 Query: 169 NKSFLCFSA----MLKNIEKEFGHFITQIEWISL-----------GGGIHFTDKDYPVKD 213 + + + + + +E + + + PV + Sbjct: 200 IEDHRPYVQAIDVVTELMANLESDKGFILEELDIGGGFGIGAHGDASSKPLSYFVDPVME 259 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + + +EPG +V T+ I E + V + + Sbjct: 260 RLRARCSAFGVPLPSVAIEPGRWVVGEAGITLYTIGAIKEITGSTTYVSVDGGMADNPRP 319 Query: 272 YLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L + V GR C +GDI E VK GD ++ + Y Sbjct: 320 ALYGAKYDAEVVGKEGLPKDRIVTVAGRCCESGDILIENLSVPGDVKPGDLLAVFNTGAY 379 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N + + +N + P + A+ +Y+D Sbjct: 380 NYSMASNYNMLPKPAVVFVENGKDFLAVDRETYDDLLAK 418 >gi|34541757|ref|NP_906236.1| diaminopimelate decarboxylase [Porphyromonas gingivalis W83] gi|34398075|gb|AAQ67135.1| diaminopimelate decarboxylase [Porphyromonas gingivalis W83] Length = 382 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 72/381 (18%), Positives = 121/381 (31%), Gaps = 35/381 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP+Y D L L V + ALK + T+ G S Sbjct: 1 MKTPFYFYDLTLLERTLSALARSAGRHDVAIHYALKANNHPRILQTVAAAGFGADCVSGG 60 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 E+ E F + K E + + +V +L + A + Sbjct: 61 EIEAAIEAGFPASDIFFAGVGKSDEEILLSLEARIGAFVVESVPELLNIERLAGSKNDIA 120 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169 I LR+NP V ++ G +D + + GL FH + Sbjct: 121 PILLRLNPEVDAHTHSHITTGLAENKFGLLPEDALALMPHLLQSGSLVWRGLHFHIGSQI 180 Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKE 220 +S F + + + F + I +GGG+ + +R + Sbjct: 181 RSAKVFEKLCEKTNRILASFRTAGYSPDIIDMGGGLGINYDEPEAEPIPDFATYIERYRR 240 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 E ++++EPG ++V +L T VL I E K IVD+ + V L Sbjct: 241 MIETGEARLHIEPGRSVVAQCGSLITQVLYIKEGKAKKFAIVDAGMTDLVRPALYEAHHQ 300 Query: 280 TIYPNTGPYT-------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 G +T V G C + D+F +K GD ++ Y Sbjct: 301 IRLVQPGEWTMRATSPSAALTEKYDVVGPICESSDVFERELLMPELKRGDYLAIRSAGAY 360 Query: 327 NINRKNWFNGINMPTIAVKNV 347 + +N +P + Sbjct: 361 GAVMASSYNMRPLPGSLFSDE 381 >gi|300869785|ref|YP_003784656.1| diaminopimelate decarboxylase [Brachyspira pilosicoli 95/1000] gi|300687484|gb|ADK30155.1| diaminopimelate decarboxylase [Brachyspira pilosicoli 95/1000] Length = 412 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 120/387 (31%), Gaps = 23/387 (5%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + KTP+Y+ K +L + + + ++ A+K + + + G S Sbjct: 22 VYKTPFYIYSKNDILQKIRFLKNVFSDIENHSIVYAIKAENNLSILKMMIEEGIGGDVVS 81 Query: 60 LYE-VMLGHEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + E ++ K E N ++ + + A++L + Sbjct: 82 IGETLKYIKAGGKAENIVFSGVAKTEEEIRKSIELNIKRFNIESIPEAIRINSIAKELKR 141 Query: 117 K--IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-----NVNGLMFHNNCEN 169 + +R+NP++ ++ G K E+ N+ + + Sbjct: 142 RVKCSIRVNPNIDAHTHEKITTGINGNKFGISIKTIRENANMLKSLDNIEIDSLSMHIGS 201 Query: 170 KSFLCFSAMLKNIEKE-----FGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220 + + I I +GGG + F + Sbjct: 202 QMVDAEPFYKAILVMRDLIAEVNSLGFNITNIDIGGGFGVRYNRAHSGFDFDKFKKDSIS 261 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--YQE 277 + + + EPG V + L V I E + + D + +V + Y E Sbjct: 262 LLKDMKLSVTTEPGRYFVAESGALIMRVEYIKEELSRKYAILDGGMNDYVRVAMYEAYNE 321 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G C + D+F + +K GD ++ D Y + + +N Sbjct: 322 IMPLVKTDKYSNYDFVGPICESSDVFANDRECETLKEGDYVALLDAGAYGFSMASNYNSR 381 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + D + S+ D Sbjct: 382 PLISQVMIDKDKHYIIRKRQSFEDMIK 408 >gi|294085433|ref|YP_003552193.1| diaminopimelate decarboxylase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665008|gb|ADE40109.1| diaminopimelate decarboxylase [Candidatus Puniceispirillum marinum IMCC1322] Length = 419 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 53/389 (13%), Positives = 113/389 (29%), Gaps = 24/389 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ + + K+ A+K +A G+ L G S E Sbjct: 27 DSPLYVYSGAGIRDAYRDFAAAIAPVNGKVHFAMKANSALGVLALLAHEGAGADIVSGGE 86 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ K + +N I + +++ A+ + Sbjct: 87 LSRALAAGISASDIVFSGVGKSKAEIEQALAANIGQINAESPAEVAMISAVAKSMGVVAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 + LR+N V+ + ++ G ++ + ++ + ++ Sbjct: 147 VALRVNVDVNAKTHAKISTGQRDTKFGISTDQNEAADLYRVMAADPHITPSGLAVHIGSQ 206 Query: 171 SFLCFSAMLKNIE-----KEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222 ++ + LGGG+ + + + Sbjct: 207 LRDMAPFETAYTALLDLGMALRADGLEVPVLDLGGGVGVDYDHATPTDFTAYGEMVTRIF 266 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATI 281 K + EPG AIV N L T V+ I + + K VIVD+++ + L + + Sbjct: 267 NKSDFKFGFEPGRAIVANNGVLLTKVIFIKDGDNKRFVIVDAAMNDLLRPTLYEAHHSIV 326 Query: 282 YPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 A + G C GD G + D ++ Y + +N Sbjct: 327 PVLPAGSDIGLADIVGPVCETGDYIGRGRMMPALASDDLLAVLSAGAYGAVMASAYNTRP 386 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + + + + Y S Sbjct: 387 PAGEVLVLDGAIHELRAKRTVESYLAEES 415 >gi|260911755|ref|ZP_05918329.1| diaminopimelate decarboxylase [Prevotella sp. oral taxon 472 str. F0295] gi|260634127|gb|EEX52243.1| diaminopimelate decarboxylase [Prevotella sp. oral taxon 472 str. F0295] Length = 387 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 59/373 (15%), Positives = 133/373 (35%), Gaps = 27/373 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+Y D+ L LD + ++ + A K A + + + G S Sbjct: 12 LPTPFYYYDEGLLRATLDALNEQVARHPNFIVHYATKANANLRILQIIKEAGLGVDCVSG 71 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F + + K A+ +N ++ +L + +++++ Sbjct: 72 GEIETALRAGFKADNIVFAGVGKSDWEIKLALENNIFCFNVESIQELEVIEQLCSEMNQQ 131 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168 + LR+NP+V+ ++ G + ++ + GL FH + Sbjct: 132 ADVCLRVNPNVNAHTHKNITTGLAENKFGIPVESVWEGIEKIQATKHVHFIGLHFHIGSQ 191 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222 F + ++ + + E I++GGG+ D +P+ DF ++ Sbjct: 192 IVNLNDFRELCTSVNSLLELLKQHNIEPEHINVGGGLGIDYDDPTSHPIPDFKAYFDMYA 251 Query: 223 EKYS----VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277 + +++ E G ++V L + VL + + K +I+D+ + + L + + Sbjct: 252 QHLQLNERQKVHFELGRSLVGQCGYLVSRVLYVKQGQSKRFLILDAGMNDLLRPALYHAK 311 Query: 278 SATIY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + P+ V G C + D+F GD ++ Y + + Sbjct: 312 HQIVNLSNPSATSEVYDVVGPVCESSDVFSRDVLLPQSHRGDLMAICSAGAYGEVMASQY 371 Query: 335 NGINMPTIAVKNV 347 N +P + + Sbjct: 372 NCRQLPKSYLSDD 384 >gi|146294666|ref|YP_001185090.1| diaminopimelate decarboxylase [Shewanella putrefaciens CN-32] gi|145566356|gb|ABP77291.1| diaminopimelate decarboxylase [Shewanella putrefaciens CN-32] gi|319427902|gb|ADV55976.1| diaminopimelate decarboxylase [Shewanella putrefaciens 200] Length = 414 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 58/382 (15%), Positives = 108/382 (28%), Gaps = 23/382 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K A + + L + G S E Sbjct: 26 GTPLYIYSRATLERHWHAFNNAVMDHPHLICYAVKANANLAVLNVLARLGSGFDIVSGGE 85 Query: 63 -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ + ++L + A +L K Sbjct: 86 LARVIEAGGSPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNLVAGRLGKVAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + LRINP V ++ G + V G+ H + Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEIVFARAHALPHLKVKGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + + IE +GGG+ T D + L + Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDDETPPHPDVYAAALLKRLGN 265 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280 +++ EPG AI N T VL + + K IVD ++ + L Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ Y + G C GD G+ ++ Y + +N Sbjct: 326 APRDSEAYEFDIVGPVCETGDFLGKERKLALAAGD-LLAVRSSGAYGFAMASNYNTRPRA 384 Query: 341 TIAVKNVDGTIKAIREFSYNDY 362 + + + + Sbjct: 385 AEVMVDGEHAFLVREREKISQL 406 >gi|254209204|ref|ZP_04915551.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei JHU] gi|147750427|gb|EDK57497.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei JHU] Length = 1083 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 703 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 762 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 763 EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 821 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 822 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 881 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 882 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 940 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 941 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1000 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1001 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1060 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1061 AAVQRFSYEDFLR 1073 >gi|296138956|ref|YP_003646199.1| diaminopimelate decarboxylase [Tsukamurella paurometabola DSM 20162] gi|296027090|gb|ADG77860.1| diaminopimelate decarboxylase [Tsukamurella paurometabola DSM 20162] Length = 453 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 58/415 (13%), Positives = 115/415 (27%), Gaps = 54/415 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + + + A K F + + + S E Sbjct: 36 GTPLFVIDEDDFRDRCRAMRDAFGD-DAAVHYASKAFLSMEIARWVRDEGLNLDVCSGGE 94 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F + A + K I+ +++S++ + A + + Sbjct: 95 LAIALRAGFPADRIALHGNNKSVAELDYAVASGIGHIVIDSLSEIARLDAIAGERGSVQD 154 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------------DKIESEIKNVNGLMFH 164 + +R+ P V + G E++ + GL H Sbjct: 155 VLIRLTPGVEAHTHEFISTAHEDQKFGFSLASNEGDSPAMRAVTAVFEADNIRLVGLHSH 214 Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFI--------TQIEWISLGGGIHFTDKDYPVKDFCQ 216 + F + + + + Q+ I LGGG+ Sbjct: 215 IGSQIFDVDGFEIAARRVLELLRDIVTRFGAEKTAQLNTIDLGGGLGIAYTAADDPPPVA 274 Query: 217 RLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDI-----------SEN 254 L + + +EPG AI V I Sbjct: 275 DLAAKLRNIVETESAALGLQTPHLAVEPGRAIAGPPGITLYEVGTIKDVVLDGKDERDPA 334 Query: 255 IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK 310 + V VD + ++ L E A P P + + G+ C GDI Sbjct: 335 FRRYVSVDGGMSDNIRPALYGAEYTVAIADRDPEGAPVPSRIVGKHCETGDILVRDTTTP 394 Query: 311 P-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + GD ++ Y + + +N P + +R + +D + Sbjct: 395 DGLAEGDLLAVAATGAYCYSMSSRYNMQPRPAVVAVKDGAARLILRRETVDDLVS 449 >gi|75907135|ref|YP_321431.1| diaminopimelate decarboxylase [Anabaena variabilis ATCC 29413] gi|75700860|gb|ABA20536.1| diaminopimelate decarboxylase [Anabaena variabilis ATCC 29413] Length = 464 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 54/395 (13%), Positives = 114/395 (28%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D++ L + ++L A K + + G S Sbjct: 61 GSPLYILDEETLRTACQQYRDGFQKYYPGESQVLYASKAWNCLAVCAIAGSEGLGIDVVS 120 Query: 60 LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ-KLHK 116 E+ + + + E+ + + TI+ + +L Sbjct: 121 GGELYTALAAGVSPAKIYLHGNNKSREELILAIESGVTIVADNWYELRTLASLTHTDQPV 180 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169 +I LR+ P + S+ G D + N GL H + Sbjct: 181 RIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLAEVFEFVSQQPNLNCVGLHAHIGSQI 240 Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKY 225 + + + + + +++GGG+ + + +K E Sbjct: 241 FERQPHRDLAAVMVQWLRDANKYGLNVTELNVGGGLGIKYVESDDPPSIDEWVKAICEVV 300 Query: 226 SVQIYLE----------PGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL 273 E PG +++ + TV I+ V +D + + Sbjct: 301 QSACAAENLPLPKLLSEPGRSLIATSCVTAYTVGSSKTIPEIRTYVSIDGGMSDNPRPIT 360 Query: 274 LYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 A + T + G+ C +GDI + + GD + YN + Sbjct: 361 YQSVYRAVIANKLSVSHTETVTIAGKHCESGDILIKNAQLPKTEPGDILVVMATGAYNYS 420 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + P V ++ +Y D Sbjct: 421 MASNYNRLPRPAAVVVANGEANLILQRETYQDLIR 455 >gi|254250170|ref|ZP_04943490.1| Diaminopimelate decarboxylase [Burkholderia cenocepacia PC184] gi|124876671|gb|EAY66661.1| Diaminopimelate decarboxylase [Burkholderia cenocepacia PC184] Length = 412 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + SL E Sbjct: 16 GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 70 Query: 63 VMLGHE-----KFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + + A Sbjct: 71 IERSLAAGFSPGGEPEGVVFTADLIDRPTLAAVLEHGVTVNAGSLDMLARIGEHA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + I+ IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFSQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 + V+I +EPG +V TL T V ++ K+ + +D+ + + A Sbjct: 248 RHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 307 Query: 280 TIYP-NTGPYTAM-------VCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G A + G C +GD+F + +IGD + D Sbjct: 308 VSVHAHDGALPAGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407 >gi|124382045|ref|YP_001024476.1| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia mallei NCTC 10229] Length = 1086 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 706 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 765 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 766 EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 824 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 825 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 884 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 885 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 943 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 944 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1003 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1004 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1063 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1064 AAVQRFSYEDFLR 1076 >gi|282850320|ref|ZP_06259699.1| putative diaminopimelate decarboxylase [Veillonella parvula ATCC 17745] gi|282579813|gb|EFB85217.1| putative diaminopimelate decarboxylase [Veillonella parvula ATCC 17745] Length = 418 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 122/393 (31%), Gaps = 29/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ ++ N+ + + N G K A+K + L + G SSL Sbjct: 21 PTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRLLQKLGVGADCSSLA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L G + E L I + ++ + + L Sbjct: 81 ELLLCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNHGSLPDTFC 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174 +R NP ++ G + E+ + V H + Sbjct: 141 VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIHTMVVSNELDID 200 Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224 IE+I LGGG+ K + L + E+ Sbjct: 201 GLVGTAELCFNLAVDIKKELGITIEFIDLGGGVGVAYKPEQTPVDFRVLSKGVEEAYNRI 260 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 V + E G + L +T + + ++ + +D+ + + L Sbjct: 261 LVANGLNDVALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDACMANLMRPALYGSYH 320 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGDR+ D + + + Sbjct: 321 HITVMGKENAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRVIIHDAGAHGHSMGFNY 380 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + + DG++ IR +Y+D + L Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413 >gi|167743070|ref|ZP_02415844.1| bifunctional protein [Burkholderia pseudomallei 14] Length = 1095 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 715 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 774 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 775 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 833 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 834 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 893 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 894 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 952 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 953 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1012 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1013 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1072 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1073 AAVQRFSYEDFLR 1085 >gi|53722474|ref|YP_111459.1| bifunctional protein [Burkholderia pseudomallei K96243] gi|52212888|emb|CAH38924.1| putative bifunctional protein [Burkholderia pseudomallei K96243] Length = 1092 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 712 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 771 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 772 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 830 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 831 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 890 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 891 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 949 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 950 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1009 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1010 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1069 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1070 AAVQRFSYEDFLR 1082 >gi|332654112|ref|ZP_08419856.1| protein TabA [Ruminococcaceae bacterium D16] gi|332517198|gb|EGJ46803.1| protein TabA [Ruminococcaceae bacterium D16] Length = 419 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 70/396 (17%), Positives = 122/396 (30%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G A+K + L + G SSL Sbjct: 19 PTPFHLYDEKGIRANARALRQAFAWNPGYTEYFAVKATPNPQILKILKEEGCGVDCSSLT 78 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G ++ E A TI + ++ ++ K+ + KKI Sbjct: 79 ELMMSDRCGFTGGQIMFSSNDTPAEEFALAAKLGATINLDDITHIDFLKETIGYIPKKIS 138 Query: 120 LRINPSV-----SYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCE 168 R NP + N ++ G +++E G+ Sbjct: 139 CRFNPGGVFRLGESKEGFQVMDNPGDAKYGMTPAQITEAFKRLKAEGAEEFGIHAFLASN 198 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 S + + + K I +I+L GG+ + + + E K Sbjct: 199 TLSNDYYPALARILFQLAVKLKEETGAHITFINLSGGVGVPYRPDQTANDIAVIGEGVRK 258 Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273 +I E G ++ L T VL K V VD+ + + Sbjct: 259 AYEEILVPAGMGDVALCTELGRFMLAPYGHLVTKVLHFKHTYKEYVGVDACAANLMRPAM 318 Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + V G C D F ++IGD + D + Sbjct: 319 YGAYHHITVMGKEDAPCDHKYDVTGALCENNDKFAVDRMLPEIEIGDLLVIHDTGAHGHA 378 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 +NG + DG+ + IR + DY+ Sbjct: 379 MGYQYNGRLRSAEVLLQEDGSTRLIRRAETPEDYFA 414 >gi|254301549|ref|ZP_04968993.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 406e] gi|157811425|gb|EDO88595.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 406e] Length = 1101 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 721 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 780 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 781 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 839 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 840 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 899 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 900 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 958 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 959 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1018 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1019 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1078 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1079 AAVQRFSYEDFLR 1091 >gi|317407679|gb|EFV87615.1| diaminopimelate decarboxylase [Achromobacter xylosoxidans C54] Length = 409 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 58/399 (14%), Positives = 113/399 (28%), Gaps = 45/399 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + A K + + + + SL E Sbjct: 16 GTPLWVYDAAVIRERIAQLRRFDA-----IRYAQKACSNLHILRLMRAEGVMVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + + D A + + ++ L + A Sbjct: 71 IERSLAAGFEPAGEPAGVVFTADLIDHATLATVVKHGITVNAGSLDMLERVGQHA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LRINP + + P S+ G D + + G+ H Sbjct: 129 RVWLRINPGFGHGHSNKTNTGGPQSKHGIWIDDVAAAIGIVRRYGLKLVGIHMHIGSGVN 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224 + S++ + IE IS GGG+ + + ++ Sbjct: 189 -YGHLSSVCDAMVDVVASLDHDIEAISAGGGLSIPYREGEPRIDCDHYFAQWDAARKRIE 247 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 + V++ +EPG +V L V I+ + VD+ + + Sbjct: 248 QRLGHEVRLEIEPGRFLVAEAGALVAEVHAINRRPERDFALVDAGFNDLMRPAMYGSYHR 307 Query: 280 TIYP-------NTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAG 325 T V G C +GD+F + +IGD + F + Sbjct: 308 ISVHAPDGATPPTAETRIAVAGPLCESGDVFTQDAGGVVSDQSLPRPRIGDFLVFHNAGA 367 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + N T R + D Sbjct: 368 YGASMSSNYNTRPLAAEVLLNRSETRLIRRRQTVADLLA 406 >gi|225010651|ref|ZP_03701121.1| diaminopimelate decarboxylase [Flavobacteria bacterium MS024-3C] gi|225005204|gb|EEG43156.1| diaminopimelate decarboxylase [Flavobacteria bacterium MS024-3C] Length = 414 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 65/384 (16%), Positives = 115/384 (29%), Gaps = 27/384 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 P Y+ D +K+ + + + +KL A K + + +N G + S+ EV Sbjct: 16 PVYVYDAEKIKSQYNRLTTAFSGVSKLKLNYAAKALSNISILRLMNSLGSGLDTVSIQEV 75 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 LG F + E + I + +S L +F K + +R Sbjct: 76 QLGLKAGFKPSDIIFTPNGVSLEELETAAGLGVRINIDNLSLLEQFGSK--HPEIPVCIR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175 INP V S+ G N+NG+ H + F Sbjct: 134 INPHVMAGGNANISVGHIDSKFGISIHQIPHILRITTLTKMNINGIHMHTGSDILDIEVF 193 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230 + I E +++I G G K+ ++ + L + K Sbjct: 194 LYASE-ILFETAKNFKNLDFIDFGSGFKVPYKEGDIETNIEELGDKLSKRFNDFCEQYGK 252 Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES--ATIY 282 EPG+ +V+ + V + + +DS + L I Sbjct: 253 PLTLAFEPGKFLVSEAGSFLAKVNVVKQTTSTVFASIDSGFNHLIRPMLYGSTHGINNIS 312 Query: 283 PNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 +G V G C D F + GD + F++ Y + +N P Sbjct: 313 NPSGRERFYSVVGYICET-DTFATNRKIAEITEGDILCFKNAGAYCFTMASNYNSRFRPA 371 Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365 + + + D N Sbjct: 372 EVLWYMGEAHLIRAAETMEDIMRN 395 >gi|53717527|ref|YP_105509.1| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia mallei ATCC 23344] gi|238563454|ref|ZP_00438861.2| iron-sulfur cluster-binding protein, Rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei GB8 horse 4] gi|52423497|gb|AAU47067.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia mallei ATCC 23344] gi|238520680|gb|EEP84138.1| iron-sulfur cluster-binding protein, Rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei GB8 horse 4] Length = 1055 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 675 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 734 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 735 EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 793 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 794 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 853 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 854 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 912 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 913 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 972 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 973 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1032 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1033 AAVQRFSYEDFLR 1045 >gi|167923209|ref|ZP_02510300.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei BCC215] Length = 1086 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 706 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 765 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 766 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 824 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 825 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 884 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 885 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 943 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 944 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1003 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1004 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1063 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1064 AAVQRFSYEDFLR 1076 >gi|262192870|ref|YP_001078798.2| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia mallei NCTC 10247] gi|261826618|gb|ABM99334.2| rieske [2Fe-2S] domain/carboxynorspermidine decarboxylase [Burkholderia mallei NCTC 10229] gi|261834998|gb|ABO02524.2| rieske [2Fe-2S] domain/carboxynorspermidine decarboxylase [Burkholderia mallei NCTC 10247] Length = 1058 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 678 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 737 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 738 EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 796 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 797 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 856 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 857 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 915 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 916 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 975 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 976 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1035 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1036 AAVQRFSYEDFLR 1048 >gi|251767426|ref|ZP_02267226.2| iron-sulfur cluster-binding protein, Rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei PRL-20] gi|243062753|gb|EES44939.1| iron-sulfur cluster-binding protein, Rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei PRL-20] Length = 1067 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 687 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 746 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 747 EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 805 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 806 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 865 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 866 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 924 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 925 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 984 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 985 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1044 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1045 AAVQRFSYEDFLR 1057 >gi|134045435|ref|YP_001096921.1| diaminopimelate decarboxylase [Methanococcus maripaludis C5] gi|132663060|gb|ABO34706.1| diaminopimelate decarboxylase [Methanococcus maripaludis C5] Length = 436 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 61/398 (15%), Positives = 134/398 (33%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++ + + + N + K K + A K + L++ G Sbjct: 31 GTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYKANTNLAVTKLLSKLGCGAD 90 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113 S E+ + E +N K + + + +++S+L + A++ Sbjct: 91 IVSAGELYIAKLSDVPSEKIVFNGNCKLKDEIKMGIEAEIRAFNVDSISELILINETAKE 150 Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLM 162 + K + R+NP+V ++ G E K + + + G+ Sbjct: 151 MGKVANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESGIALETIKMAEKMDNVKIVGIH 210 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216 H + F+ + + + + +I+ ++LGGG+ + Sbjct: 211 CHIGSQLTYISPFVEEARKIMDFVVLLKNEGIEIKDVNLGGGLGIPYDKNTKIPVQEDLS 270 Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHV 269 + + + LEPG ++V L TV + + +++D+ + + Sbjct: 271 KAILDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVKDTPVAKWIMIDAGMNDMM 330 Query: 270 PDYLL--YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + Y E + G C + D+FG+ ++I D ++ DV Y Sbjct: 331 RPAIYESYHEIVPCTVRDEKEVVSIAGGLCESSDVFGKDRELSKMEIKDTVAILDVGAYG 390 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 I+ N +N P + + N + D + Sbjct: 391 ISMANNYNSRGKPAMILTNEKEVSLIRARETLADLISK 428 >gi|330878524|gb|EGH12673.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 412 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 57/399 (14%), Positives = 113/399 (28%), Gaps = 45/399 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D Q + + + A K + + L + SL E Sbjct: 17 GTPLWVYDGQLIKKRVQQLA-AFD----TVRFAQKACSNLHILRLLRDAGAAVDAVSLGE 71 Query: 63 VMLGH-EKFGGE-------THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 + F + + + V+ + ++ L++ A Sbjct: 72 LERALHAGFSAQTAQGTAGVVFTADVFDRATLQRVVEAQVEVNVGSIDMLHQLG--ALSP 129 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCE 168 ++ LRINP + + S+ G + ++ GL H Sbjct: 130 GHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHTHLQDALKLVRHYRLHLVGLHMHIGSG 189 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRL 218 + + + + IE IS GGG+ + D ++ Sbjct: 190 VD-YQHLQQVCSTMAELVVEMDHDIEAISAGGGLSVPYRAGELPINTSHYFAQWDHARKR 248 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE 277 E + +++ +EPG +V L + V VD+ + L Sbjct: 249 IEAHLGHPIRLEIEPGRFLVAQAGVLVSEVRATKHMGGKHFTLVDAGFNDLMRPSLYGSY 308 Query: 278 SATIYPNTGPYT-----AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325 + +V G C +GD+F E ++GD + F D Sbjct: 309 HEMSLITSRDEPLPMQETVVAGPLCESGDVFTQAEGGIVESRLLPVAQVGDYLVFHDAGA 368 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + R +D Sbjct: 369 YGASMSSNYNSRTHAAEVLVDDGQERLIRRRQPLDDLLR 407 >gi|271963175|ref|YP_003337371.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021] gi|270506350|gb|ACZ84628.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021] Length = 460 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 122/398 (30%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D++ + G ++ A K F + + Q G S E Sbjct: 62 GSPLYVVDEEDFRSRCRDYREAF--TGGEVHYAGKAFLCREVARWIMQEDLGLDVCSAGE 119 Query: 63 VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + K AV + I+ ++ ++ + A K + Sbjct: 120 LAVALSVGFPPERITLHGNNKSLAELEKAVEAGVGHIVADSFEEIARLGFLADKHGRRPQ 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + + + GL H + Sbjct: 180 VMIRVTVGVEAHTHEFIATAHDDQKFGFSLSSGAAAEAARRILALPQLELVGLHSHIGSQ 239 Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F + + + + LGGG + + + + Sbjct: 240 ITDTAGFEVAARRLATLLVQIKEEHGVVLPELDLGGGYGIPYVEGDTALDVKEIADGLRG 299 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG AI V I + + V +D + ++ Sbjct: 300 IVANVARSAGLPVPKLTVEPGRAIAGLAGVTLYEVGTIKDVEGLRTYVSIDGGMSDNIRT 359 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGY 326 L E A+ ++GP + + G+ C +GD+ + + GD ++ Y Sbjct: 360 ALYGAEYTARLASRESSSGPMLSRLVGKHCESGDMVVRDLWLPEDLATGDLVAVAGTGAY 419 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + N +N + P + + +R + +D Sbjct: 420 CRSLANNYNYLPKPAVVAVKDGVSRVIVRRETEDDLLR 457 >gi|303327333|ref|ZP_07357774.1| diaminopimelate decarboxylase [Desulfovibrio sp. 3_1_syn3] gi|302862273|gb|EFL85206.1| diaminopimelate decarboxylase [Desulfovibrio sp. 3_1_syn3] Length = 426 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 62/395 (15%), Positives = 114/395 (28%), Gaps = 35/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ ++ L + G + ++K A + + + + S E Sbjct: 28 GTPLYVYNENVLRQRCRDLTALSGQPGFGVNYSIKANANPVLLRMIREEGLVVDAMSPGE 87 Query: 63 VMLG-HEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + F Y + D E+ L + + +++SQL+ K+ + Sbjct: 88 LFMNDLAGFTPAEILYISNNNSDTELQNALVHGLLVSVDSLSQLDTLGRL--NRGGKVMV 145 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174 R NP + ++ G + + G+ H Sbjct: 146 RFNPGIGAGHHAKVVTAGKETKFGVTPDKMDEVFALLARHELTLAGINQHIGSLFMEPDG 205 Query: 175 F----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFS-- 222 + +L E + ++E I GGG Y + D +RL Sbjct: 206 YLNAARVLLDLAETLPDGALDRLEIIDFGGGFGIPYHKYEGEARLDMADLGRRLHAMISG 265 Query: 223 ----EKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQE 277 Y + +EPG + L V + N K V D V + Sbjct: 266 WAASAGYKGRFLVEPGRYVAAECGVLLGRVHAVKNNGDKRYVGTDLGFNVLVRPAMYDSF 325 Query: 278 S-------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + P + G C +GDI + ++ GD + D Y Sbjct: 326 HDVEIYRGEKGAADAEPMRQTIVGNICESGDILAKDRLLPVMREGDVLGILDAGAYGFTM 385 Query: 331 KNWFNGINMPTIAVKNVDG-TIKAIREFSYNDYYN 364 + +N P + DG R + D Sbjct: 386 ASNYNQRRRPAEVLIQSDGTARLIRRRETLEDLAR 420 >gi|238019149|ref|ZP_04599575.1| hypothetical protein VEIDISOL_01012 [Veillonella dispar ATCC 17748] gi|237863848|gb|EEP65138.1| hypothetical protein VEIDISOL_01012 [Veillonella dispar ATCC 17748] Length = 418 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 66/393 (16%), Positives = 122/393 (31%), Gaps = 29/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ ++ N+ + + N G K A+K + L + G SSL Sbjct: 21 PTPFHIYDEEGIIENMKSFIDAFSWNKGFKQYFAVKATPNPYIMRVLQKLGVGADCSSLA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML G + E L I + ++ + + L Sbjct: 81 ELMLCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNHGSLPDTFC 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174 +R NP ++ G + E+ + V H + Sbjct: 141 VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIHTMVVSNELDID 200 Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 +E+I LGGG+ K + L + E+ +I Sbjct: 201 GLVGTAELCFNLAVDIKNELGINVEFIDLGGGVGVAYKPEQTPVDFKALSKGVEEAYNRI 260 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E G + L +T + + ++ + +DS + + L Sbjct: 261 LVANGLGDVALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDSCMANLMRPALYGSYH 320 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGDRI D + + + Sbjct: 321 HITVMGKENAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRIIIHDAGAHGHSMGFNY 380 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + + DG++ IR +Y+D + L Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413 >gi|126458140|ref|YP_001076002.1| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1106a] gi|242312184|ref|ZP_04811201.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1106b] gi|126231908|gb|ABN95321.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1106a] gi|242135423|gb|EES21826.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1106b] Length = 1134 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 754 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 813 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 814 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 872 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 873 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 932 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 933 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 991 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 992 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1051 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1052 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1111 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1112 AAVQRFSYEDFLR 1124 >gi|254186770|ref|ZP_04893286.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei Pasteur 52237] gi|157934454|gb|EDO90124.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei Pasteur 52237] Length = 1116 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 736 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 795 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 796 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 854 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 855 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 914 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 915 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 973 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 974 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1033 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1034 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1093 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1094 AAVQRFSYEDFLR 1106 >gi|296115244|ref|ZP_06833885.1| diaminopimelate decarboxylase [Gluconacetobacter hansenii ATCC 23769] gi|295978345|gb|EFG85082.1| diaminopimelate decarboxylase [Gluconacetobacter hansenii ATCC 23769] Length = 452 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 111/387 (28%), Gaps = 28/387 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP +++ Q L ++AG V + A+K + L+ G S Sbjct: 47 LGTPTWVMGAQTLRTRYHRLDRAMRDAGLDVDIHFAVKANDHLAILKILHAQGAGADVVS 106 Query: 60 LYEVMLG-HEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKL 114 E+ ++ K A+ I + +L+ A Sbjct: 107 GGELRRAIAAGIPAREIVFSGVGKTRAEMELALHHGIARINVESAEELDLLSAVAVACGR 166 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167 + LRINP V ++ G +E + G+ H Sbjct: 167 TAPVALRINPDVDAGTHAKITTGLAGNKFGIPYDRAVELYAHAASLPGIHAAGVAVHIGS 226 Query: 168 ENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEF 221 + + + A + + ++ I GGG+ + + + ++ Sbjct: 227 QIERMQPYRAAYARVADLVRAIRARGLGVDVIDCGGGLGISYRHETEGAPEALAHAIRIE 286 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVPDYLLYQES 278 ++ +EPG + L +TV+ + D+++ L Sbjct: 287 LGDLGTRLEIEPGRWLAGPAGVLLSTVVLRKRGYDGMPPFIVLDAAMNDLARPSLYDAWH 346 Query: 279 ATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 I + V G C +GD FG + G R++ D Y + + Sbjct: 347 GIIPLSARDAVAPSEQVHVVGPVCESGDTFGHDRTLPRLHDGARVALLDTGAYGMVMSST 406 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYN 360 +N M + + Sbjct: 407 YNARAMAAQVLVDGSRWDVIRARQKVE 433 >gi|291286718|ref|YP_003503534.1| Orn/DAP/Arg decarboxylase 2 [Denitrovibrio acetiphilus DSM 12809] gi|290883878|gb|ADD67578.1| Orn/DAP/Arg decarboxylase 2 [Denitrovibrio acetiphilus DSM 12809] Length = 412 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 118/392 (30%), Gaps = 30/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ ++ N + K A+K + L G SS+ Sbjct: 21 PTPFHIYDEKAIVENAKRFKKAFEWAPNFKNYFAVKALPNPAIVKLLKNEGFGADCSSMA 80 Query: 62 EVMLG-HEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ G+ + + E + I + ++ ++ + A Sbjct: 81 ELLICDMVGITGDDIMFTSNETPEEEYQKAMEQKAVINLDDITHIDFLEKCAGLPETIC- 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENK----- 170 ++ G IE+ K V H + Sbjct: 140 -FRYNPGPLKGGNDIIGKPEDAKYGLTKTQMIEAYKIMKSKGVKKFGMHTMVASNELNVD 198 Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------ 223 + + + +++I+LGGGI K + + L + Sbjct: 199 YFVETAVILFEMAAEIATEVGINLDFINLGGGIGIPYKPEQDEVNLEELGSKIKAKYDEI 258 Query: 224 ----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 + +IY E G I L T + K + VD+S+ + + Sbjct: 259 LSSKGFQPEIYFECGRMITGPYGYLVTKAIHTKSIYKEYIGVDASMANLMRPGMYGSYHH 318 Query: 280 TIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 +T V G C D F ++I D ++ D + + +N Sbjct: 319 VTVLGKENAEPVFTYDVVGSLCENCDKFAVDRKLPKIEIDDVLAIHDTGAHGHSMGFNYN 378 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 G + DGT + IR +Y D + L Sbjct: 379 GKLRSAELLLKADGTAEMIRRAETYEDLFATL 410 >gi|206563916|ref|YP_002234679.1| diaminopimelate decarboxylase [Burkholderia cenocepacia J2315] gi|198039956|emb|CAR55934.1| putative diaminopimelate decarboxylase [Burkholderia cenocepacia J2315] Length = 412 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 123/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + + SL E Sbjct: 16 GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMREEGACVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + + A Sbjct: 71 IERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARIGEHA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + I+ IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFSQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 + V+I +EPG +V TL T V ++ K+ + +D+ + + A Sbjct: 248 RHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 307 Query: 280 TIYP-NTGPYTAM-------VCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G A + G C +GD+F + +IGD + D Sbjct: 308 VSVHAHDGALPAGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407 >gi|254204234|ref|ZP_04910593.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei FMH] gi|147745118|gb|EDK52199.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei FMH] Length = 1107 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 727 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 786 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 787 EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 845 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 846 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 905 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 906 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 964 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 965 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1024 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1025 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1084 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1085 AAVQRFSYEDFLR 1097 >gi|226196072|ref|ZP_03791658.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei Pakistan 9] gi|254193632|ref|ZP_04900064.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei S13] gi|169650383|gb|EDS83076.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei S13] gi|225931965|gb|EEH27966.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei Pakistan 9] Length = 1122 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 742 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 801 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 802 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 860 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 861 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 920 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 921 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 979 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 980 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1039 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1040 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1099 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1100 AAVQRFSYEDFLR 1112 >gi|254355511|ref|ZP_04971791.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei 2002721280] gi|148023604|gb|EDK82666.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei 2002721280] Length = 1110 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 730 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 789 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 790 EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 848 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 849 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 908 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 909 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 967 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 968 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1027 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1028 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1087 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1088 AAVQRFSYEDFLR 1100 >gi|121597394|ref|YP_990159.1| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia mallei SAVP1] gi|254174356|ref|ZP_04881018.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia mallei ATCC 10399] gi|121225192|gb|ABM48723.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia mallei SAVP1] gi|160695402|gb|EDP85372.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia mallei ATCC 10399] Length = 1113 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 733 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 792 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 793 EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 851 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 852 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 911 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 912 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 970 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 971 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1030 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1031 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1090 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1091 AAVQRFSYEDFLR 1103 >gi|216391|dbj|BAA14211.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. amylosacchariticus] Length = 440 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 66/402 (16%), Positives = 122/402 (30%), Gaps = 44/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + +AG ++ A K F++ M + S Sbjct: 32 GTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVS- 90 Query: 61 YE--VMLGHEKFGGETHAYNV------AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 E + L + F + A + I + + K Sbjct: 91 GESYIRLLQQAFRQNASTFMETIRAGKNCGWRLSTASAALWWIISMKSSLLEDL--CKET 148 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMF 163 + LRI P V + S+ G + ++SE + G+ Sbjct: 149 GHSIDVLLRITPRVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHC 208 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC---- 215 H + F + I K+ + + ++LGGG + Sbjct: 209 HIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIRYTEDDEPLHATEYV 268 Query: 216 ----QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VE 266 + +KE + +Y I ++EPG ++V + T TV E V + Sbjct: 269 EKIIEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEVPGVRQYVAVDGGMN 328 Query: 267 AHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 ++ L + A T + G+ C +GD+ VK GD ++ Sbjct: 329 DNIRPALYQAKYEAAAANRIGEAHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVLY 388 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N +N I P + ++ +Y D Sbjct: 389 -RAYGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVK 429 >gi|121591442|ref|ZP_01678719.1| carboxynorspermidine decarboxylase [Vibrio cholerae 2740-80] gi|121546706|gb|EAX56884.1| carboxynorspermidine decarboxylase [Vibrio cholerae 2740-80] Length = 344 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 156/340 (45%), Positives = 229/340 (67%), Gaps = 3/340 (0%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD + Y+DGTTSS + Sbjct: 6 LRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+E FGGETHAY+V Y + ++ V+ CD +IFN+ SQL ++ + +GLR Sbjct: 66 EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKA-SLGLR 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 INP VSY+ LA+P R FSRLG + ES ++NG+MFH NCENK F +L Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 184 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + FG ++ +++W+SLGGG+ FT Y V+ LK F+E+++VQ+YLEPGEAI+T T Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 244 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299 T L TV+DI EN IVDS+ EAH D L+Y+E A++ + G + ++ SCLA Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 304 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 GD F F++P+++G ++ D AGY + + NWFNG+ M Sbjct: 305 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKM 344 >gi|217425313|ref|ZP_03456807.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 576] gi|217391564|gb|EEC31592.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 576] Length = 1110 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 730 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 789 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 790 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 848 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 849 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 908 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 909 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 967 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 968 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1027 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1028 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1087 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1088 AAVQRFSYEDFLR 1100 >gi|311107337|ref|YP_003980190.1| diaminopimelate decarboxylase [Achromobacter xylosoxidans A8] gi|310762026|gb|ADP17475.1| diaminopimelate decarboxylase 1 [Achromobacter xylosoxidans A8] Length = 411 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 56/400 (14%), Positives = 114/400 (28%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + A K + + + + SL E Sbjct: 16 GTPLWVYDAAVIRERIAQLRRFD-----TIRYAQKACSNLHILRLMRAEGAVVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + ++ L + + Sbjct: 71 IERSLAAGFQPQGEPEGIVFTADLIDHATLAAVLKHGITVNAGSLDMLARVGQAS--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LRINP + + P S+ G D + + G+ H Sbjct: 129 RVWLRINPGFGHGHSNKTNTGGPQSKHGIWIGDVAEAMAIVRRHGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------- 223 + S++ + IE IS GGG+ ++ + C E Sbjct: 189 -YAHLSSVCDAMVDVVASLDHDIEAISAGGGLSIPYREGDARIDCDHYFEQWNAARQRIA 247 Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 + +++ +EPG +V L + V I+ + VD+ + + Sbjct: 248 ERLGHEIRLEIEPGRFLVAEAGALVSEVHSINRRPERDFALVDAGFNDLMRPAMYGSYHR 307 Query: 280 TIYPNT--------GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 V G C +GD+F + +IGD + F D Sbjct: 308 ISVHAPDGSQPQGAAETRIAVAGPLCESGDVFTQDAGGVVSDQLLPQPRIGDFLVFHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGSSMSSNYNSRPLAPEVLLDNGAARLIRRRQTIGELLA 407 >gi|170076731|ref|YP_001733369.1| diaminopimelate decarboxylase [Synechococcus sp. PCC 7002] gi|169884400|gb|ACA98113.1| diaminopimelate decarboxylase [Synechococcus sp. PCC 7002] Length = 462 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 61/396 (15%), Positives = 121/396 (30%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L + ++ A K ++ + ++ G S Sbjct: 56 GSPLYILDEYTLRTTCCQYRDSFQKYYGGESLVIYASKAWSCMAICAIVDSEGLGFDVVS 115 Query: 60 LYEVML-GHEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + ++ E++ L TII + +L K ++ Sbjct: 116 GGELYTTLKAGVSPQKIYFHGNNKSREELNFALDQGVTIIVDNFFELELLKALTGDRQTT 175 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCE 168 KI LR+ P + S+ G ++E N GL H + Sbjct: 176 AKIILRLTPGIECHTHEYIRTGHLDSKFGFDPNQIEAAFALVSQAEFLNCIGLHAHIGSQ 235 Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + + + + E ++LGGG+ + + + + Sbjct: 236 IFEQQPHKDLGDVLAGWYKKAADYGLNPEILNLGGGLGIRYTESDDPPSIEAWSQNVAQS 295 Query: 226 S-----------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDY 272 ++ +EPG ++V + TV + I+ V VD + + Sbjct: 296 LEAACRSHGIPLPKLIVEPGRSLVGSACVTAYTVGSRKVVPEIRTYVSVDGGMSDNPRPI 355 Query: 273 LLY----QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 A T V G+ C +GD+ + + GD + YN Sbjct: 356 TYQSLYRAVIANRLSAPCEETVTVAGKHCESGDVVIKDAQLPTPQPGDILVVLATGAYNY 415 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + N IR + D Sbjct: 416 SMASNYNRIGRPAAVLVNEGEAQLIIRRETLEDLVR 451 >gi|76818456|ref|YP_335638.1| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1710b] gi|76582929|gb|ABA52403.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1710b] Length = 1076 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 696 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 755 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 756 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 814 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 815 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 874 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 875 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 933 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 934 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 993 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 994 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1053 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1054 AAVQRFSYEDFLR 1066 >gi|318040226|ref|ZP_07972182.1| diaminopimelate decarboxylase [Synechococcus sp. CB0101] Length = 466 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 47/394 (11%), Positives = 110/394 (27%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ L + L A K ++ + + G + S Sbjct: 61 GTPLYVLDEATLRGTAQAYRKALASHYPGSALALYASKANSSLAITAVVASEGLGLDAVS 120 Query: 60 LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + E ++ E+ + T++ + + + + Sbjct: 121 AGELLTAVQGGMPPERIVFHGNNKSLEELRLAVELGVTVVADNWLDIEQLASLEMAQPVR 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170 + LR P + S+ G + V+GL H + Sbjct: 181 LMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEGVLQHLKQCSWAQVSGLHAHIGSQIF 240 Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 + + + +++GGG+ + + Sbjct: 241 ELQPHRDLAAVMADALKLAREMGHPVSDLNVGGGLGIRYVESDDPPSIDAWVLTVAEAVA 300 Query: 225 --------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYLL 274 ++ EPG ++V + +V + VD + + Sbjct: 301 AACQERGLDLPRLLCEPGRSLVATSGVTLYSVGSRKDIPGIRTYLSVDGGMSDNPRPITY 360 Query: 275 YQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + + + + + G+ C +GD+ + P GD ++ YN + Sbjct: 361 QSQYTAVLADRPEAEPSDSVTLAGKHCESGDVLLKDLALPPATSGDVLAVFATGAYNASM 420 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N I P + + + R D Sbjct: 421 SSNYNRIPRPAAVMVHNGLSEVVQRREQPEDLLR 454 >gi|134282506|ref|ZP_01769210.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 305] gi|134246063|gb|EBA46153.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 305] Length = 1110 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 730 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 789 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 790 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 848 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 849 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 908 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 909 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 967 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 968 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1027 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1028 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1087 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1088 AAVQRFSYEDFLR 1100 >gi|312139160|ref|YP_004006496.1| diaminopimelate decarboxylase lysa [Rhodococcus equi 103S] gi|311888499|emb|CBH47811.1| diaminopimelate decarboxylase LysA [Rhodococcus equi 103S] Length = 473 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 59/406 (14%), Positives = 120/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + A ++ A K F + + + +S E Sbjct: 64 GTPLFVVDEDDFRSRCREMARAFGGAE-RVHYASKAFLSAEIARWVRDEGLSMDVASGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F E + K AV + I+ +++ ++ + + A + + + Sbjct: 123 LAVALHAGFPAERITMHGNNKSVAELDAAVAAGVGHIVLDSMVEIERLDEVAARRGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +RI V + G E+ + GL H + Sbjct: 183 VLIRITVGVEAHTHEFIATAHEDQKFGFSLSGGKAMAAVARVFETGNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLKNIEKEFGHFIT--------QIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + Q+ + LGGG+ + L Sbjct: 243 IFEVDGFELAAHRVIGLMREIVDRFGAEKTSQLSMVDLGGGLGISYLPSDNPPPVAELAA 302 Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 + +EPG AI T V I + + V VD Sbjct: 303 KLAHIVATESAAAGLPVPTLMVEPGRAIAGPGTVTLYEVGTIKDVTLDAGATRRYVSVDG 362 Query: 264 SVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L E + P A V G+ C +GDI + + GD + Sbjct: 363 GMSDNIRTSLYQAEYDARLVSRDSDGAPVVARVVGKHCESGDIVIRDAWMPDDLGPGDLL 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + D + Sbjct: 423 AVAATGAYCYSMSSRYNLLTRPAVVAVRDGASRLILRRETVEDLLS 468 >gi|325673535|ref|ZP_08153226.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707] gi|325555556|gb|EGD25227.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707] Length = 473 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 59/406 (14%), Positives = 120/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + A ++ A K F + + + +S E Sbjct: 64 GTPLFVVDEDDFRSRCREMARAFGGAE-RVHYASKAFLSAEIARWVRDEGLSMDVASGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F E + K AV + I+ +++ ++ + + A + + + Sbjct: 123 LAVALHAGFPAERITMHGNNKSVAELDAAVAAGVGHIVLDSMVEIERLDEVAARRGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +RI V + G E+ + GL H + Sbjct: 183 VLIRITVGVEAHTHEFIATAHEDQKFGFSLSGGKAMAAVARVFETGNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLKNIEKEFGHFIT--------QIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + Q+ + LGGG+ + L Sbjct: 243 IFEVDGFELAAHRVIGLMREIVDRFGAEKTSQLSMVDLGGGLGISYLPSDNPPPVAELAA 302 Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 + +EPG AI T V I + + V VD Sbjct: 303 KLAHIVATESAAAGLPVPTLMVEPGRAIAGPGTVTLYEVGTIKDVTLDAGATRRYVSVDG 362 Query: 264 SVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L E + P A V G+ C +GDI + + GD + Sbjct: 363 GMSDNIRTSLYQAEYDARLVSRDSDGAPVVARVVGKHCESGDIVIRDAWMPDDLGPGDLL 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + D + Sbjct: 423 AVAATGAYCYSMSSRYNLLTRPAVVAVRDGASRLILRRETVEDLLS 468 >gi|294791964|ref|ZP_06757112.1| protein TabA [Veillonella sp. 6_1_27] gi|294457194|gb|EFG25556.1| protein TabA [Veillonella sp. 6_1_27] Length = 418 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 122/393 (31%), Gaps = 29/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ ++ N+ + + N G K A+K + L + G SSL Sbjct: 21 PTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRLLQKLGVGADCSSLA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L G + E L I + ++ + + L Sbjct: 81 ELLLCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNHGSLPDTFC 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174 +R NP ++ G + E+ + V H + Sbjct: 141 VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIHTMVVSNELDID 200 Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224 +E+I LGGG+ K + L + E+ Sbjct: 201 GLVGTAELCFNLAVDIKKELGITVEFIDLGGGVGVAYKPEQTPVDFRVLSKGVEEAYNRI 260 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 V + E G + L +T + + ++ + +D+ + + L Sbjct: 261 LVANGLNDVALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDACMANLMRPALYGSYH 320 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGDR+ D + + + Sbjct: 321 HITVMGKENAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRVIIHDAGAHGHSMGFNY 380 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + + DG++ IR +Y+D + L Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413 >gi|294793828|ref|ZP_06758965.1| protein TabA [Veillonella sp. 3_1_44] gi|294455398|gb|EFG23770.1| protein TabA [Veillonella sp. 3_1_44] Length = 418 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 122/393 (31%), Gaps = 29/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ ++ N+ + + N G K A+K + L + G SSL Sbjct: 21 PTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRLLQKLGVGADCSSLA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L G + E L I + ++ + + L Sbjct: 81 ELLLCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNHGSLPDTFC 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174 +R NP ++ G + E+ + V H + Sbjct: 141 VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIHTMVVSNELDID 200 Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224 +E+I LGGG+ K + L + E+ Sbjct: 201 GLVGTAELCFNLAVDIKKELGITVEFIDLGGGVGVAYKPEQTPVDFRVLSKGVEEAYNRI 260 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 V + E G + L +T + + ++ + +D+ + + L Sbjct: 261 LVANGLNDVALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDACMANLMRPALYGSYH 320 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGDR+ D + + + Sbjct: 321 HITVMGKENDPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRVIIHDAGAHGHSMGFNY 380 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + + DG++ IR +Y+D + L Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413 >gi|213970713|ref|ZP_03398838.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato T1] gi|301382601|ref|ZP_07231019.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato Max13] gi|302059222|ref|ZP_07250763.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato K40] gi|302133620|ref|ZP_07259610.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924547|gb|EEB58117.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato T1] Length = 412 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 57/399 (14%), Positives = 113/399 (28%), Gaps = 45/399 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D Q + + + A K + + L + SL E Sbjct: 17 GTPLWVYDGQLIKKRVQQLA-AFD----TVRFAQKACSNLHILRLLRDAGAAVDAVSLGE 71 Query: 63 VMLGH-EKFGGE-------THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 + F + + + V+ + ++ L++ A Sbjct: 72 LERALHAGFSAQNAQGTAGVVFTADVFDRATLQRVVEAQVEVNVGSIDMLHQLG--ALSP 129 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCE 168 ++ LRINP + + S+ G + ++ GL H Sbjct: 130 GHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHTHLQDALTLVRYYRLHLVGLHMHIGSG 189 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRL 218 + + + + IE IS GGG+ + D ++ Sbjct: 190 VD-YQHLQQVCSTMAELVVEMDHDIEAISAGGGLSVPYRAGELPINTSHYFAQWDHARKR 248 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE 277 E + +++ +EPG +V L + V VD+ + L Sbjct: 249 IEAHLGHPIRLEIEPGRFLVAQAGVLVSEVRATKHMGGKHFTLVDAGFNDLMRPSLYGSY 308 Query: 278 SATIYPNTGPYT-----AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325 + +V G C +GD+F E ++GD + F D Sbjct: 309 HEMSLITSRDEPLPMQETVVAGPLCESGDVFTQAEGGIVESRLLPAAQVGDYLVFHDAGA 368 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + R +D Sbjct: 369 YGASMSSNYNSRTHAAEVLVDDGQERLIRRRQPLDDLLR 407 >gi|254265028|ref|ZP_04955893.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1710a] gi|254216030|gb|EET05415.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1710a] Length = 1128 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 748 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 807 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 808 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 866 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 867 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 926 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 927 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 985 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 986 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1045 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1046 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1105 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1106 AAVQRFSYEDFLR 1118 >gi|78213154|ref|YP_381933.1| diaminopimelate decarboxylase [Synechococcus sp. CC9605] gi|78197613|gb|ABB35378.1| diaminopimelate decarboxylase [Synechococcus sp. CC9605] Length = 459 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 47/395 (11%), Positives = 111/395 (28%), Gaps = 34/395 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + + A K ++ M G + S Sbjct: 53 TPLYVLDEATVRATCRAYREALNKHYAGPSLPIYASKANSSLVMSSLAASEGLGLDAVSA 112 Query: 61 YEVMLG-HEKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116 E++ G+ + D E+ +N TI+ + L++ + A Sbjct: 113 GELLTALRGGMPGDRMVLHGNNKSDEELLLAYANKVTIVVDNQHDLDRLAELVPAGSEPA 172 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN 169 ++ LR P + S+ G + + GL H + Sbjct: 173 RLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQVEPVLRSLVGQPWAQLTGLHAHIGSQI 232 Query: 170 KSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224 + + + + +++GGG+ + ++ + + Sbjct: 233 FELEPHRDLAAVMADKLKLARDLGHPVTDLNVGGGLGIRYVESDDPPSIEQWIKVVAEAV 292 Query: 225 ---------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273 ++ EPG ++V +V +D + + Sbjct: 293 TSACQERGLELPRLMCEPGRSLVATAGVTLYSVGSRKTIPNVRTYVAIDGGMSDNPRPIT 352 Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + + + G+ C +GD+ + + GD ++ YN + Sbjct: 353 YQSLYTCCLADRPLAKPDESVNLVGKHCESGDVLLKDLSLPTTESGDIVAVFATGAYNAS 412 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N I P + + + +D Sbjct: 413 MSSNYNRIPRPAAVLVHDGSAELVQKREQPDDLLR 447 >gi|257056970|ref|YP_003134802.1| diaminopimelate decarboxylase [Saccharomonospora viridis DSM 43017] gi|256586842|gb|ACU97975.1| diaminopimelate decarboxylase [Saccharomonospora viridis DSM 43017] Length = 479 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 56/412 (13%), Positives = 119/412 (28%), Gaps = 51/412 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ ++ + A K F + + + S E Sbjct: 65 GTPLFVIDEVDFKARCAEYAEAFEDP-ALVHYAAKAFLCTEVARWVAEKGLSLDVCSGGE 123 Query: 63 VMLG-HEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + +F E ++ K AV + ++ ++ ++ + + AQ+ ++ Sbjct: 124 LAVAQRAQFPPERITFHGNNKSLAELEAAVEAGVGLVVLDSYYEIARLAEIAQRHGVVQQ 183 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + + S + GL H + Sbjct: 184 VLVRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNSPSLKLVGLHSHIGSQ 243 Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQI----EWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + ++ I LGGG + D ++ Sbjct: 244 IFDTDGFEVAARRVVGLLAELRKEHGPELIEQLSVIDLGGGFGISYTDRDNPPPPAQMIT 303 Query: 221 FSEKYSVQIYL-----------EPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 + + EPG AI T V I + + V VD Sbjct: 304 QIREIVRKECAFADLPVPRIAGEPGRAIAGPGTVTLYEVGTIKDVTLGEGTSRRYVSVDG 363 Query: 264 SVEAHVPDYLLYQESATIYPNT----------GPYTAMVCGRSCLAGDIFGEFHFEKP-V 312 + ++ L + + V G+ C +GDI + + Sbjct: 364 GMSDNIRTALYDAAYDCRLVSRSSDDGQPGEVKAVLSRVVGKHCESGDIVVRDCWLPDTL 423 Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 GD ++ Y + + +N P + +R + D + Sbjct: 424 APGDLLAVAATGAYCYSMASNYNKQPKPAVVAVRNGNHRLLLRRETNEDMFR 475 >gi|256370697|ref|YP_003108522.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri SMDSEM] gi|256009489|gb|ACU52849.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri SMDSEM] Length = 402 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 62/388 (15%), Positives = 120/388 (30%), Gaps = 28/388 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ + +K+ + K+ A K + L + G + S+ Sbjct: 13 GTPLYVYNAKKIEDQYKLMKKSFSYIKNFKINYACKANTNISILKFLKKLGSGLDTVSIQ 72 Query: 62 EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV +G F + Y EI + I + +S L + + +K + IG Sbjct: 73 EVEIGLKAGFKPKEIIYTPNGVSLEEIKKAIKAGVLINLDNLSLLEQIGN--EKTNYPIG 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFL 173 +RI P + S+ G K I++ + G+ H + + Sbjct: 131 IRITPHIMGGGNKKISVGHIDSKFGISYYQLPHIKKIIKNTGLKIEGIHMHTGSDI-IDM 189 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-------- 225 + + +++I G G K K L F +K Sbjct: 190 GVFFQIAERLLNVANLFKTLKYIDFGSGFKVPYKQSDYKTDLDLLAFFLKKKLSIFFEKN 249 Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATI 281 ++++ EPG+ +++ + V I + VDS + Sbjct: 250 YYKKIKLFFEPGKFLMSESGFFLVKVNVIKQTTSTVFACVDSGFNHFIRPMFYDSYHQID 309 Query: 282 YPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + V G C + D F ++ GD + F + Y + + +N Sbjct: 310 NISNPLGKLRFYTVVGYICES-DTFCVNRPINEIREGDILCFRNAGAYCFSMSSHYNSRY 368 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNNL 366 P + + + D NN+ Sbjct: 369 KPAEVLLYKKKDFLIRKRENMQDLLNNM 396 >gi|167850070|ref|ZP_02475578.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia pseudomallei B7210] Length = 409 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 29 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 88 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 89 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 147 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 148 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 207 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 208 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 266 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 267 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 326 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 327 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 386 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 387 AAVQRFSYEDFLR 399 >gi|23394392|gb|AAN31485.1| diaminopimelate decarboxylase [Phytophthora infestans] Length = 422 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 55/395 (13%), Positives = 115/395 (29%), Gaps = 32/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+Q + +N L + + A+K + L+Q G SS Sbjct: 21 GTPLQIYDEQLIRDNARRLLTAFRAHFPDFQQFYAVKALPNPAILKLLHQEGCGMDCSSS 80 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116 E+ + E G+ + + + + VS ++ Sbjct: 81 AELHIVKELGVPGDQVIFTSNFTAKNDLGTAFDQGVIMNLDDVSLVDSLVAVRGKCPELM 140 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENK 170 L + S+ P ++ G +E+ K G+ Sbjct: 141 SFRLNPGIGRTDSETKSNVLGGPDAKFGVPPFQIVEAYRKAQQAGAKGFGIHMMTGSCVM 200 Query: 171 SFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224 + + + + + E++++GGG+ ++ + + + + Sbjct: 201 NQEYWRETVTVLFNTIVQLKKELGIEFEFMNIGGGLGIPYREDQEPVNVEAIAKMLREVF 260 Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274 ++ +E G + L T I E VD+ + + + Sbjct: 261 DEAVKEHGLQTLPRLCMENGRFMTGPFGWLVTRCEAIKETYGRYYGVDACMAHLMRPGMY 320 Query: 275 YQESATIYPNTGPYTA---MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 P V G C D F + ++GD D ++ + Sbjct: 321 GAFHHISIPARANEEVSPSHVVGTLCENNDWFAKDRPLPKAQVGDLFVIHDTGAHSHSMG 380 Query: 332 NWFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365 +NG + DG+ IR +Y+ Y N Sbjct: 381 FQYNGKLRAPEVLLRADGSDSLIRERETYDALYGN 415 >gi|293366637|ref|ZP_06613314.1| diaminopimelate decarboxylase [Staphylococcus epidermidis M23864:W2(grey)] gi|291319406|gb|EFE59775.1| diaminopimelate decarboxylase [Staphylococcus epidermidis M23864:W2(grey)] gi|329736965|gb|EGG73222.1| diaminopimelate decarboxylase [Staphylococcus epidermidis VCU045] Length = 421 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 56/394 (14%), Positives = 120/394 (30%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ N + + +G + A K F M +++ S Sbjct: 26 GTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCIQMVKLIDEENLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F + ++ K + + +T+ ++ A + Sbjct: 86 GELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVDTLEEIELIDKYADS-NVD 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G K ++ + G+ FH + Sbjct: 145 VVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVNKVKATKHLQLKGIHFHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------R 217 + K + ++ +++GGG + + Sbjct: 205 IEGTEPMIKTAKIVLNWLASERIEVSLLNIGGGFGIKYVEGDESFPIEQGISEITEAIKE 264 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275 + + +I +EPG +IV V I + V + H+ L Sbjct: 265 TAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSVDGGMSDHIRTALYG 324 Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 + + + + G+ C +GDI V GD ++ Y+ + Sbjct: 325 AQYEALLVNRNEKANESVTIAGKLCESGDIIVRDAPLPSSVHRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P + + I+ S N Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|254254367|ref|ZP_04947684.1| Diaminopimelate decarboxylase [Burkholderia dolosa AUO158] gi|124899012|gb|EAY70855.1| Diaminopimelate decarboxylase [Burkholderia dolosa AUO158] Length = 424 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 57/400 (14%), Positives = 119/400 (29%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + SL E Sbjct: 28 GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 82 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + + A Sbjct: 83 IERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHRVTVNAGSLDMLARVGEHA--PGH 140 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 141 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRRYGLKLVGIHMHIGSGVD 200 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + I+ IS GGG+ Y + R + Sbjct: 201 -YGHLSQVCDAMVGLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFSQWDAARKRIE 259 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 ++V+I +EPG +V TL V ++ K+ + +D+ + + A Sbjct: 260 RHLGHAVRIEIEPGRFLVAEAGTLVAEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 319 Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G C +GD+F + +IGD + D Sbjct: 320 VSVHAHDGALPEGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLPQPQIGDLLFVHDAG 379 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 380 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 419 >gi|329939819|ref|ZP_08289120.1| diaminopimelate decarboxylase [Streptomyces griseoaurantiacus M045] gi|329301389|gb|EGG45284.1| diaminopimelate decarboxylase [Streptomyces griseoaurantiacus M045] Length = 463 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 122/399 (30%), Gaps = 37/399 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D++ + A K F + + L++ S Sbjct: 62 VGTPAYVLDEEDFRARARAWRTAF-GHDADVFYAGKAFLSRAVVRWLDEEGLNLDVCSGG 120 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + A++ K AV + I+ ++ ++ + A++L K+ Sbjct: 121 ELATALSAGLAPDRIAFHGNNKTPAEIRRAVEAGVGRIVLDSFQEIVRVAHLARELGKRQ 180 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNC 167 +R+ V + G + ++ + +V G+ H Sbjct: 181 RVQIRVTVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALQLDSLDVIGIHSHIGS 240 Query: 168 ENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + F ++ ++ I LGGG+ + + Sbjct: 241 QIFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALT 300 Query: 224 K-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVP 270 + + +I +EPG AI T V + + V VD + ++ Sbjct: 301 EIVTRECEAARLRTPRISVEPGRAIAGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIR 360 Query: 271 DYLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAG 325 L E + + P V G+ C +GDI + F + GD I+ Sbjct: 361 TALYDAEYSVALVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGA 420 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + +R + D Sbjct: 421 YCRSMASNYNHALRPPVVAVREGEARVIVRRETEEDLLR 459 >gi|167828611|ref|ZP_02460082.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 9] Length = 413 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 33 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 92 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 93 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 151 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 152 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 211 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 212 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 270 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 271 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 330 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 331 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 390 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 391 AAVQRFSYEDFLR 403 >gi|167821815|ref|ZP_02453495.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia pseudomallei 91] Length = 417 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 37 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 96 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 97 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 155 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 156 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 215 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 216 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 274 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 275 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 334 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 335 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 394 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 395 AAVQRFSYEDFLR 407 >gi|124005272|ref|ZP_01690113.1| diaminopimelate decarboxylase [Microscilla marina ATCC 23134] gi|123989094|gb|EAY28672.1| diaminopimelate decarboxylase [Microscilla marina ATCC 23134] Length = 420 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 63/385 (16%), Positives = 116/385 (30%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D +L + +++ A K + + G + SL E Sbjct: 23 GTPVYVYDADHILGQIARFREGFSTVNLQIKYACKALTNINIMKLMLSQGLGLDTVSLSE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V +G F + + E + I +S L KF + Sbjct: 83 VRMGLAAGFVPQQIVFTPNCVGIEELIEAVELGVKINIENLSNLEKFAQRYGSQVPVCIR 142 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLC 174 + + S+ G + + +NG+ H++ + Sbjct: 143 LNPHIATQQNADKVNWWHNQSKFGISMDQLAQVKAIETTYNLPINGIHIHSSSVIMTPEV 202 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQI- 229 F + +E+I GGGI + V + Q+L +++ + Sbjct: 203 FLQ-GAQTVFDIALGFQNLEFIDFGGGIKVDVGDGQEVIDVVELGQKLDPVFQQFCQKYG 261 Query: 230 -----YLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIY- 282 + EPG +V N+ TL T + + V VDS + + + Sbjct: 262 HTLELWFEPGRFLVGNSGTLLTECKVCKRNGGTDFVGVDSGFNHLIRPMMYDAYHQIVNV 321 Query: 283 --PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 P V G C D G+ V+ GD I+ + Y + + +N P Sbjct: 322 SNPQGTQKKYTVVGNVCE-IDNLGKDRMLAEVREGDLIALKSAGAYGYSMASTYNSRFRP 380 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + +Y D N Sbjct: 381 AEVLVLNGEAKLIRKRDTYEDLMRN 405 >gi|260888729|ref|ZP_05899992.1| diaminopimelate decarboxylase [Selenomonas sputigena ATCC 35185] gi|260861482|gb|EEX75982.1| diaminopimelate decarboxylase [Selenomonas sputigena ATCC 35185] Length = 505 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 61/393 (15%), Positives = 113/393 (28%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N A+K + L++ GT SS+ Sbjct: 104 PTPFHIYDEKAIRENFRRFKRAFSWAPNFTEHFAVKAAPNPRLLQILHEEGAGTDCSSIA 163 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L GE E I + +S ++ + A Sbjct: 164 ELLLSEAAGIKGEEIMLTSNDTPAEEFQKARELGAIINLDDISHIDYLEKCAGFPD--CL 221 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLCF 175 + ++ G ++ K V H + Sbjct: 222 SFRYNPGPLIEGNDIIGKPTEAKYGLTHHQIFDAYKIAREKGVKRFGLHTMVISSELRNE 281 Query: 176 SA------MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + M + +E+++LGGG + +R+ E +I Sbjct: 282 AFLFTAELMFNLAVEIKKRLGISLEFVNLGGGFGIPYRPEEEAIDVERVGSGIEALYKKI 341 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E G I L TT L + K+ + +D+ + + L Sbjct: 342 IEPAGLAGLAIKAESGRYITGPYGWLVTTALHEKKTYKDYIGLDACMANLMRPALYGAYH 401 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + G C D F + IGDRI D + + Sbjct: 402 HITVVGKEDAFCDHIYDITGSLCENNDKFAIDRKLPKIDIGDRIVIHDTGAHGHAMGFNY 461 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG+++ IR + DY+ L Sbjct: 462 NGKLRSAELLLREDGSVELIRRAETLGDYFATL 494 >gi|302392019|ref|YP_003827839.1| Orn/DAP/Arg decarboxylase 2 [Acetohalobium arabaticum DSM 5501] gi|302204096|gb|ADL12774.1| Orn/DAP/Arg decarboxylase 2 [Acetohalobium arabaticum DSM 5501] Length = 412 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 66/393 (16%), Positives = 125/393 (31%), Gaps = 30/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+Q + N N G K A+K + L + G SSL Sbjct: 19 PTPFHLYDEQGIRENARKLNEAFAWNDGFKEYFAVKATPNPTILKILQEEGCGVDCSSLT 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ + F G+ ++ + + I + ++ ++ ++ A + I Sbjct: 79 ELMMSDKVGFSGDDIMFSSNVTPKEDYELASKLDAIINLDDITHIDFLEEVAGIPER-IS 137 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 R NP ++ N ++ G ++ + GL + Sbjct: 138 CRYNPGNNFKSDNDIMDNPAEAKYGFTYPQLVEGFKKLQDKGAKEFGLHAFLASNTTADE 197 Query: 174 CF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + K +I +I+L GGI + + E + +I Sbjct: 198 YYPALARILFETAVKLNKETGAEIGFINLSGGIGIPYRPEEEPADIMAIGEGVREAYEEI 257 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G ++ L TT + K+ V +D+ + + Sbjct: 258 LVPAGLDDVAIFTELGRFMLGPYGCLVTTAIHKKHIYKDYVGLDACAADLMRPAMYGAYH 317 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F V GD + D + + Sbjct: 318 HISVMGKEDQPHDHKYDVTGGLCENNDKFAIDRMLPKVDKGDLLVIHDTGAHGYAMGYNY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG+ K IR + +DY+ L Sbjct: 378 NGKLRSAEVLLQEDGSTKLIRRAETPDDYFATL 410 >gi|329667404|gb|AEB93352.1| Diaminopimelate decarboxylase [Lactobacillus johnsonii DPC 6026] Length = 434 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 67/398 (16%), Positives = 131/398 (32%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ N + + + + A K FA+ M+ N+ T S Sbjct: 30 GTPLVVYDVSQIRNQIRAFKKVFEEEQVNYAVSYASKAFASIAMYQVANEEEAYTDVVSA 89 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + F E +++ K E + ++ I+ + ++N Q Sbjct: 90 GELYTAMKANFPMERVSFHGNNKSKEELEMAVKNHVGKIMIDNFYEINLLNQVLEEQDSE 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G K + ++++ ++ G+ H Sbjct: 150 INVMLRITPGISAHTHEYDQTGQVDSKFGFDLKSGQADKALQEVLKNQRMHMLGIHAHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK--------DF 214 + F + + ++ I++GGG Sbjct: 210 SQIFELNGFEMAAAKLVDVAASWRKNYDYTAQVINVGGGFGIKYVQEDHPLKPEEFVKAI 269 Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + +K+ + K++ I +EPG +IV V + E V VD + ++ Sbjct: 270 VKTIKDEATKHNFPLPEIDIEPGRSIVGPAGYNLYKVGSMKEIPGLVPYVAVDGGMGDNI 329 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + T+ V G+ C +GDI +K GD ++ D Sbjct: 330 RPALYQAKYETVLANDPQRKASQEFHVAGKYCESGDILA-DAKLPLLKAGDILAMLDTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + IR S D Sbjct: 389 YGYSMASNYNRNPRPAVVFAEDGKAQVVIRRESLEDLV 426 >gi|295094252|emb|CBK83343.1| Diaminopimelate decarboxylase [Coprococcus sp. ART55/1] Length = 433 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 64/392 (16%), Positives = 117/392 (29%), Gaps = 30/392 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I TP+++ D++ + N N G K A+K + L + GT SSL Sbjct: 33 IPTPFHIYDEEGIRENARKLYKAFSWNKGFKEYFAVKATPNPTILKILKEEGCGTDCSSL 92 Query: 61 YEVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+M+ F G+ ++ E TI + + ++ + A K Sbjct: 93 TELMMSDKMGFKGDEIMFSSNDTPAEEFVLAKKLNATINLDDFTHIDFLEKAAGIPEKIC 152 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCE 168 + D ++ G IE+ K V H Sbjct: 153 CRFNPGGKFSISTTIMDNPG-DAKYGMTKDQIIEAYKILKAKGVKRFGMHAFLASNTVTN 211 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + ++++I+L GG+ + + E K + Sbjct: 212 EYYPTLAKILFETAVEIKEKTGVKLDFINLSGGVGIPYTPDKEPNDIMVIGEGVRKVYEE 271 Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I+ E G ++ L TT + K + VD+ + + Sbjct: 272 VLVPAGMGDVAIFTELGRFMLAPYGHLVTTAIHEKHTHKEYIGVDACAVNLMRPAMYGAY 331 Query: 278 SATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + V G C D F + +GD + D + Sbjct: 332 HHITVLGKENEPCDHKYDVTGSLCENNDKFAIDRMLPKIDMGDILVIHDTGAHGFAMGYN 391 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 +NG + DG+ K IR + DY+ Sbjct: 392 YNGKLKSAEVLLRPDGSFKLIRRAETPEDYFA 423 >gi|28867441|ref|NP_790060.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato str. DC3000] gi|28850675|gb|AAO53755.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato str. DC3000] Length = 412 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 57/399 (14%), Positives = 113/399 (28%), Gaps = 45/399 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D Q + + + A K + + L + SL E Sbjct: 17 GTPLWVYDGQLIKKRVQQLA-AFD----TVRFAQKACSNLHILRLLRDAGAAVDAVSLGE 71 Query: 63 VMLGH-EKFGGE-------THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 + F + + + V+ + ++ L++ A Sbjct: 72 LERALHAGFSAQTTQGAAGVVFTADVFDRATLQRVVEAQVEVNVGSIDMLHQLG--ALSP 129 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCE 168 ++ LRINP + + S+ G + ++ GL H Sbjct: 130 GHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHTHLQDALTLVHYYRLHLVGLHMHIGSG 189 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRL 218 + + + + IE IS GGG+ + D ++ Sbjct: 190 VD-YQHLQQVCSTMAELVVEMDHDIEAISAGGGLSVPYRAGELPINTSHYFAQWDHARKR 248 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE 277 E + +++ +EPG +V L + V VD+ + L Sbjct: 249 IEAHLGHPIRLEIEPGRFLVAQAGVLVSEVRATKHMGGKHFTLVDAGFNDLMRPSLYGSY 308 Query: 278 SATIYPNTGPYT-----AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325 + +V G C +GD+F E ++GD + F D Sbjct: 309 HEMSLITSRDEPLPMQETVVAGPLCESGDVFTQAEGGIVESRLLPVAQVGDYLVFHDAGA 368 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + R +D Sbjct: 369 YGASMSSNYNSRTHAAEVLVDDGQERLIRRRQPLDDLLR 407 >gi|107025839|ref|YP_623350.1| diaminopimelate decarboxylase [Burkholderia cenocepacia AU 1054] gi|116692977|ref|YP_838510.1| diaminopimelate decarboxylase [Burkholderia cenocepacia HI2424] gi|105895213|gb|ABF78377.1| diaminopimelate decarboxylase [Burkholderia cenocepacia AU 1054] gi|116650977|gb|ABK11617.1| diaminopimelate decarboxylase [Burkholderia cenocepacia HI2424] Length = 412 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + SL E Sbjct: 16 GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + + A Sbjct: 71 IERSLAAGFSPSGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARIGEHA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + I+ IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFNQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 + V+I +EPG +V TL T V ++ K+ + +D+ + + A Sbjct: 248 RHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 307 Query: 280 TIYP-NTGPYTAM-------VCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G A + G C +GD+F + +IGD + D Sbjct: 308 VSVHAHDGALPAGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407 >gi|319788956|ref|YP_004090271.1| Orn/DAP/Arg decarboxylase 2 [Ruminococcus albus 7] gi|315450823|gb|ADU24385.1| Orn/DAP/Arg decarboxylase 2 [Ruminococcus albus 7] Length = 422 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 122/391 (31%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N N G K A+K + L + G SSL Sbjct: 19 PTPFHIYDEKGIRENARNLYKAFSWNKGYKEFFAVKATPNPYILQILKEEGCGVDCSSLT 78 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML F GE ++ E I + + ++ Sbjct: 79 ELMLSECCGFKGEDIMFSSNVTPAEEYVKAKEMGAYINLDDFTHIDFLDKLCGIPETICC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---------SEIKNVN-GLMFHNNCEN 169 R NP ++S N ++ G + IE ++ ++ L + Sbjct: 139 -RYNPGGTFSISTKIMDNPGDAKYGFTHEQIIEGFRILKEKGAKYFGIHAFLASNTVTNE 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + + ++I+L GG+ + ++ + E K +I Sbjct: 198 YYPKLARILFELAVEIKEKVGIEFKFINLSGGVGIAYEPDKPQNDIFAIGEGVHKAFDEI 257 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G ++ L TTV K VD+ + + Sbjct: 258 LVPAGLGDVAIFTELGRYMLAPYGHLVTTVKHFKHTYKEYAGVDACACNLMRPAMYGAYH 317 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F ++IGD + D + + + Sbjct: 318 HITVLGKEDKPCDHKYDVTGSLCENNDKFAIDRMLPELEIGDILVIHDAGAHGFSMGYNY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + +G ++ IR + DY++ Sbjct: 378 NGRLRSAELLLKENGDVQMIRRAETPADYFS 408 >gi|302530980|ref|ZP_07283322.1| diaminopimelate decarboxylase [Streptomyces sp. AA4] gi|302439875|gb|EFL11691.1| diaminopimelate decarboxylase [Streptomyces sp. AA4] Length = 444 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 55/397 (13%), Positives = 121/397 (30%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL+D++++ A + A K + + + + S E Sbjct: 50 GTPAYLLDEEQVRETARAYRRALPEAD--VAFASKALCTRAVLRWVAEEGLSLDTCSAGE 107 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F E + + A+ I+ +++ ++ + A + + Sbjct: 108 IAVARAVGFPAERILLHGNAKTPEDLKAALQYGVGRIVLDSLDEVEQLGALAHGAQR-VL 166 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------------KIESEIKNVNGLMFHNNC 167 +R+ P VS + G + + + GL H Sbjct: 167 IRVTPGVSGDTHAAITTGTEGQKFGFSLRADVRDNVDRAVAAVLSQPSLQLTGLHCHIGS 226 Query: 168 ENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLK 219 + + M++ + + + + + LGGG D + + + +RL+ Sbjct: 227 QVSRVDRYEEAARRMVEVLVRIRDQYGITLRELDLGGGHAVPYADREASFDLDGYARRLR 286 Query: 220 EFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272 ++ +EPG AIV V + + V VD + + Sbjct: 287 VALGYECSSRDFPLPRLTIEPGRAIVGPAGITVYRVCAVKRGARTFVAVDGGMSDNPRPA 346 Query: 273 LLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 L V GR C +GD+ + + +GD ++ Y+ Sbjct: 347 LYGARYTARLVGRRTKAARTPMTVVGRHCESGDVLADVCLPDDIHVGDLLAVPCTGAYHH 406 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + +R + D Sbjct: 407 SLASNYNLVGRPPLVGVRDGHATLLVRRETEEDLLRR 443 >gi|27467998|ref|NP_764635.1| diaminopimelate decarboxylase [Staphylococcus epidermidis ATCC 12228] gi|27315543|gb|AAO04677.1|AE016747_174 diaminopimelate decarboxylase [Staphylococcus epidermidis ATCC 12228] Length = 421 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 56/394 (14%), Positives = 120/394 (30%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ N + + +G + A K F M +++ S Sbjct: 26 GTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCIQMVKLIDEENLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F + ++ K + + +T+ ++ A + Sbjct: 86 GELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVDTLEEIELIDKYADS-NVD 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G K ++ + G+ FH + Sbjct: 145 VVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVNKVKATKHLQLKGIHFHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------R 217 + K + ++ +++GGG + + Sbjct: 205 IEGTEAMIKTAKIVLNWLASERIEVSLLNIGGGFGIKYVEGDESFPIEQGISEITEAIKE 264 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275 + + +I +EPG +IV V I + V + H+ L Sbjct: 265 TAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSVDGGMSDHIRTALYG 324 Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 + + + + G+ C +GDI V GD ++ Y+ + Sbjct: 325 AQYEALLVNRNEKANESVTIAGKLCESGDIIVRDAPLPSSVHRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P + + I+ S N Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|298492876|ref|YP_003723053.1| diaminopimelate decarboxylase ['Nostoc azollae' 0708] gi|298234794|gb|ADI65930.1| diaminopimelate decarboxylase ['Nostoc azollae' 0708] Length = 463 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 53/395 (13%), Positives = 118/395 (29%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D++ L K ++L A K + + + G S Sbjct: 60 GSPLYILDEETLRTACRQYHDTFKQHYKDESQVLYASKAWNCLAVCAIVASEGLGIDVVS 119 Query: 60 LYEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ + + +D + A+ S C + N + + Sbjct: 120 GGELYTALNAGVTPDKIYLHGNNKSRDELVLAIESGCTIVADNWYELKTLVELVTKSSPV 179 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169 +I LR+ P + S+ G D E N GL H + Sbjct: 180 RIMLRLTPGIECHTHEYIRTGHLDSKFGFDPSDLDEVFAFVSKQPSLNCVGLHAHIGSQI 239 Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL-KEFSEKY 225 + + + + +++ +++GGG+ + + K E Sbjct: 240 FERQPHRDLAAVMVQWLRDAAKYNLELKELNVGGGLGIKYTESDDPPSIEEWSKAICEVV 299 Query: 226 SVQIY----------LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL 273 EPG +++ ++ + +++ V +D + + Sbjct: 300 QQACAAENLPLPKLLCEPGRSLIATACVTAYSIGSAKVIPDLRTYVTIDGGMSDNPRPIT 359 Query: 274 LYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 ++ N T + G+ C +GDI + + GD + YN + Sbjct: 360 YQSVYRSVVANKMSAALTETVTLAGKHCESGDILIKNAQLPKTEPGDILVVMGTGAYNYS 419 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + P + ++ +Y D Sbjct: 420 MASNYNRLPRPAAVLVANGEANLILQRENYQDIIR 454 >gi|169334033|ref|ZP_02861226.1| hypothetical protein ANASTE_00426 [Anaerofustis stercorihominis DSM 17244] gi|169258750|gb|EDS72716.1| hypothetical protein ANASTE_00426 [Anaerofustis stercorihominis DSM 17244] Length = 424 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 125/397 (31%), Gaps = 35/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+I + K++ +D + G + A K F M + Q + S Sbjct: 20 GTPLYVISENKIIEAIDLIKKSFEEYGLDYDINYAGKAFTNIAMVKIIKQQGISLDTVSG 79 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + ++ + K + +A+ + I ++ ++ A++L Sbjct: 80 GEIYTALKAGLDPKRICFHGSNKSAQEIREAIEAGVGVITIDSFYEIGLVGRIAKELETV 139 Query: 118 IGLR--INPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168 + ++P V R S+ G + I+ E N+ G+ H + Sbjct: 140 QNVHFRVSPGVEAHTHEYIQTGRIDSKFGIPVNMAVRAARMIIDEEYLNLTGVHCHIGSD 199 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224 K F + + I +IE ++LGGG + K Sbjct: 200 ISSPKPFEIAATTMLEIVYNIKEMGVEIEALNLGGGFGINYLHDDPVFDVEEYVHTISKI 259 Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDY 272 +I +EPG I+ ++ I E + + + Sbjct: 260 IRKQCDILGIKIPKIIVEPGRYIIGPAGITLYSIGTIKEIPYLRKYISVDGGMADNPRPA 319 Query: 273 LLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 L + V G+ C D+ + GD ++ + YN Sbjct: 320 LYGAIYHAVIANKYNKEANELYTVSGKCCET-DMLIKDILLPQAAPGDILAVLNTGAYNY 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + D +++ +Y + N Sbjct: 379 SMASHYNRLQSPPVVLLKDDKAELMVKKDTYENLIQN 415 >gi|145300547|ref|YP_001143388.1| diaminopimelate decarboxylase [Aeromonas salmonicida subsp. salmonicida A449] gi|142853319|gb|ABO91640.1| diaminopimelate decarboxylase [Aeromonas salmonicida subsp. salmonicida A449] Length = 416 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 55/385 (14%), Positives = 109/385 (28%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S E Sbjct: 27 GTPLYVYSRATLERHWHAFDQAAGDIPHLICYAVKANSNLALLNLLARLGSGFDIVSGGE 86 Query: 63 V--MLGHEKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + +L + VA + E+ A+ + ++L + A + KK Sbjct: 87 LSRVLAAGGDPAKVVFSGVAKSEAEMRLALDKEILCFNLESEAELERLNRVAGSMGKKAR 146 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 +R+NP + ++ G + + G+ H + Sbjct: 147 VSVRVNPDIDAGTHPYISTGLKQNKFGIPIEQAPAIYRKAAAMANIEIKGVDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + I + +GGG+ + + LK+ Sbjct: 207 ELNPFMEAADKLLRLIDTLAAEGIHIHHLDVGGGLGVNYGAEQPPHPTEYAEALKQKLAG 266 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI-- 281 + + EPG AIV N L T V + +D+ + + L I Sbjct: 267 RDLTLLFEPGRAIVANAGVLLTRVEYLKPGETRNFALIDAGMNDLLRPSLYGAWMNIIEV 326 Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C GD G+ + G ++ Y + +N Sbjct: 327 DSRTAHEKALYDVVGPVCETGDFLGKERTLA-IAEGSLLAVRSAGAYGFTMSSNYNTRPR 385 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D + Sbjct: 386 AAEVLVDGTQSFLIREREQLADLWR 410 >gi|255671797|gb|ACU26531.1| diaminopimelate decarboxylase [Glycine max] Length = 488 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 63/387 (16%), Positives = 129/387 (33%), Gaps = 27/387 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ N++ + + A+K + + L G S E+ Sbjct: 97 PFYLYSKPQITRNVEAYKDALEGLNSIIGYAIKANNDLKILEHLRHLGCGAVLVSGNELK 156 Query: 65 LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 L F +N ++ + ++ L + A++ + L Sbjct: 157 LALRAGFDPTRCIFNGNGKILEDLVLAAQEGVFVNIDSEFDLENIVEAAKRAGKKVNVLL 216 Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVN--GLMFHNNCENKSF 172 RINP V S+ G + D ++ + G H Sbjct: 217 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQCFLDAVKEHPNELKLVGAHCHLGSTITKV 276 Query: 173 LCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F ++ N + +++++++GGG+ +D +++ Sbjct: 277 DIFRDAATIMINYIDQIRDQGFEVDYLNIGGGLGIDYYHSGAILPTPRDLIDTVRDLVIS 336 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +++ NT L V + N KN +++D S+ + L Sbjct: 337 RGLNLIIEPGRSLIANTCCLVNRVTGVKTNGSKNFIVIDGSMAELIRPSLYDAYQHIELV 396 Query: 284 NTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P T V G C + D G+ G + D Y ++ + +N Sbjct: 397 SPAPSNAETETFDVVGPVCESADFLGKGRELPTPAKGTGLVVHDAGAYCMSIASTYNLKM 456 Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364 P DG++ IR ++ D+ Sbjct: 457 RPPEYWVEDDGSVSKIRHGETFEDHIR 483 >gi|167898681|ref|ZP_02486082.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 7894] Length = 422 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 42 LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 101 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 102 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 160 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 161 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 220 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 221 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 279 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 280 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 339 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 340 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 399 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 400 AAVQRFSYEDFLR 412 >gi|119512926|ref|ZP_01631989.1| diaminopimelate decarboxylase [Nodularia spumigena CCY9414] gi|119462422|gb|EAW43396.1| diaminopimelate decarboxylase [Nodularia spumigena CCY9414] Length = 473 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 115/398 (28%), Gaps = 36/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D++ L K ++L A K + + G S Sbjct: 61 GSPLYILDEETLRLACQQYRDTFKQYYQGESQVLYASKAWNCLAICAIAASEGLGIDVVS 120 Query: 60 LYEVMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + + E+ + + TI+ + +L + A+ Sbjct: 121 GGELYTALNAGVTPDKLYLHGNNKSREELVLAIESGSTIVADNWQELRILVEMAEAAPGT 180 Query: 118 IGLRIN----PSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNN 166 +RI P + S+ G D E N GL H Sbjct: 181 SAIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLDEVFTFVSKQPSLNCVGLHAHIG 240 Query: 167 CENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFS 222 + + + + + + +++GGG+ + + +K Sbjct: 241 SQIFERQPHRDLAAVMVQWLQKAANYGLNVTELNVGGGLGIRYTESDDPPSIEEWVKAIC 300 Query: 223 EKYSVQI----------YLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVP 270 E EPG +++ T+ + +I+ V VD + + Sbjct: 301 EVVQSACTAANLPLPKLLCEPGRSLIATACITAYTMGSSKVVPDIRTYVTVDGGMSDNPR 360 Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + N T + G+ C +GDI + + GD + Y Sbjct: 361 PITYQSVYRAVVANKVSAPLTQTVTIAGKHCESGDILIKNAQLPKTEPGDILVIMGTGAY 420 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + +N + P V +R SY D Sbjct: 421 NYSMASNYNRLPRPAAVVVANGEANLILRRESYQDLIR 458 >gi|255324500|ref|ZP_05365617.1| diaminopimelate decarboxylase [Corynebacterium tuberculostearicum SK141] gi|255298406|gb|EET77706.1| diaminopimelate decarboxylase [Corynebacterium tuberculostearicum SK141] Length = 445 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 64/404 (15%), Positives = 136/404 (33%), Gaps = 43/404 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ D+ + + A K F + + + +N+ ++SL E Sbjct: 39 QTPLYVFDEDDFRSRCQDMARAFGGPEH-VHYASKAFISKKIVNWVNEEGLCLDAASLNE 97 Query: 63 VMLGHEK-FGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + KD E + ++ + +L + A + + Sbjct: 98 LKIALAAEFPAERITTHGNNKDEEYLRLCVDAGVGHVVIDNELELEELNRIAGEAGKVQP 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ P V + G K +E++ +++GL H + Sbjct: 158 VMIRVKPGVDAHTHEFIATAHEDQKFGISLATGAAFAAAKRCLEADNLHLSGLHCHVGSQ 217 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------- 216 + F ++ + + +E + LGGG Y + Sbjct: 218 VFNAEGFKLAAERVMGLYRQIYTELGVTLEELDLGGGFGIPYMPYEEALDIERVAGDMLG 277 Query: 217 RLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265 +K +E+ + + +EPG ++V + V + + ++ + VD + Sbjct: 278 AVKHTAEELGIEAPFLLVEPGRSLVAGSAVTVYRVGTVKDVETGKSDLPLRRYISVDGGM 337 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320 ++ L + + + V G C +GDI E ++ GD I+F Sbjct: 338 SDNIRPALYGSAYDVRVVNRFSDGEEVPSRVVGFHCESGDILLEDGELPNDIQPGDLIAF 397 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 GY + +NG P + V T +R + D + Sbjct: 398 AATGGYQYMMSSRYNGAVRPAVVATRVGQTKPMLRRETIEDLLS 441 >gi|269798093|ref|YP_003311993.1| Orn/DAP/Arg decarboxylase 2 [Veillonella parvula DSM 2008] gi|269094722|gb|ACZ24713.1| Orn/DAP/Arg decarboxylase 2 [Veillonella parvula DSM 2008] Length = 418 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 123/393 (31%), Gaps = 29/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ ++ N+ + + N G K A+K + L + G SSL Sbjct: 21 PTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRLLQKLGVGADCSSLA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L G + E L I + ++ + + L Sbjct: 81 ELILCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNHGSLPDTFC 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174 +R NP ++ G + E+ + V H + Sbjct: 141 VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIHTMVVSNELDID 200 Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 +E+I LGGG+ K + L + E+ +I Sbjct: 201 GLVGTAELCFNLAVDIKKELGITVEFIDLGGGVGVAYKPEQTPVDFRALSKGVEEAYNRI 260 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E G + + L +T + + ++ + +D+ + + L Sbjct: 261 LVANGLIDVALAYECGRMVTGSFGYLVSTAIHKKDIYRHYIGLDACMANLMRPALYGSYH 320 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGDR+ D + + + Sbjct: 321 HITVMGKENAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRVIIHDAGAHGHSMGFNY 380 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + + DG++ IR +Y+D + L Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413 >gi|319946455|ref|ZP_08020692.1| diaminopimelate decarboxylase [Streptococcus australis ATCC 700641] gi|319747423|gb|EFV99679.1| diaminopimelate decarboxylase [Streptococcus australis ATCC 700641] Length = 449 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 115/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+ + N G K A+K + L + G +S Sbjct: 52 PTPFHLYDEAGIRQTARALHQAFSWNPGFKEYFAIKATPNPAILKILKEEGCGVDCASYV 111 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + + A Sbjct: 112 ELLMAQKLGFTGQEIMFSSNNTPAEEMFFARQLGATINLDAYEDVAFLQSVATLPEVISC 171 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169 V + D ++ G + I++ +I V H + Sbjct: 172 RYNPGGVFELGTDIMDHP-EEAKFGMTKEQLIQAFIELKILGVKRFGIHALLASNTVSND 230 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + +++++L GG+ K + + E + I Sbjct: 231 YYPELAKQLFQLAVEVVEKTGVTLDFVNLSGGVGVNYKPEDQPNDIAVIGEGVRRAYEDI 290 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 Y E G ++ + L T V + + + VD+S + + Sbjct: 291 LVPAGLDQVKIYTELGRFMLASHGLLVTHVTHKKQTYRTYLGVDASAVNLLRPAMYGAYH 350 Query: 279 ATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P+ + G C D F + +IGD + D + + +N Sbjct: 351 HITNLDRPDGETEVVDIVGSLCENNDKFAKNREFPVSEIGDLLVIHDTGAHGYSMGYQYN 410 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + G + IR DY+ L Sbjct: 411 AKLRSAEILLEESGQTRLIRRAEKPEDYFATL 442 >gi|292669999|ref|ZP_06603425.1| diaminopimelate decarboxylase [Selenomonas noxia ATCC 43541] gi|292648365|gb|EFF66337.1| diaminopimelate decarboxylase [Selenomonas noxia ATCC 43541] Length = 419 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 116/393 (29%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D+ K+ N G + A+K + L++ GT SS+ Sbjct: 21 PTPFHIYDEAKIRANFRRLREAFSWAPGFREHFAVKALPNPRIVQILHEEGAGTDCSSIA 80 Query: 62 EVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+++ GE D + + L+ A+ L Sbjct: 81 ELLISAAAGVKGEEIMLTSN--DTPWEEFQKAIALGAVINLDDLSHLDYMAEHAGLPEVL 138 Query: 121 RINPSVSYSKFILADPNRP-FSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFLCF 175 + +P ++ G ++ V H + Sbjct: 139 SFRYNPGDLIEGNDIIGKPVEAKYGLTRPQMFEGYRRAQEMGVKRFGLHTMVISSELRTE 198 Query: 176 ------SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 M + + + +E+++LGGG + + E+ I Sbjct: 199 AFLLTARIMFELAAELKKNLGICVEFVNLGGGFGIPYRPEENPIDYAAVGAGIERLYNDI 258 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E G AI + L +TVL + K + +DS + + L Sbjct: 259 MRPAGLGSTAIRTESGRAITGDAGWLVSTVLHEKDTYKKYIGLDSCMANLMRPALYGAYH 318 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGD + D + + Sbjct: 319 HITVLGKENAPADHIYDVTGSLCENNDKFAIDRALPKIDIGDIVVIHDTGAHGSAMGFNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DGTI+ IR + +DY+ L Sbjct: 379 NGKLWCAELLLRTDGTIELIRRAQTLDDYFATL 411 >gi|330839873|ref|YP_004414453.1| Diaminopimelate decarboxylase [Selenomonas sputigena ATCC 35185] gi|329747637|gb|AEC00994.1| Diaminopimelate decarboxylase [Selenomonas sputigena ATCC 35185] Length = 422 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 61/393 (15%), Positives = 113/393 (28%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N A+K + L++ GT SS+ Sbjct: 21 PTPFHIYDEKAIRENFRRFKRAFSWAPNFTEHFAVKAAPNPRLLQILHEEGAGTDCSSIA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L GE E I + +S ++ + A Sbjct: 81 ELLLSEAAGIKGEEIMLTSNDTPAEEFQKARELGAIINLDDISHIDYLEKCAGFPD--CL 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLCF 175 + ++ G ++ K V H + Sbjct: 139 SFRYNPGPLIEGNDIIGKPTEAKYGLTHHQIFDAYKIAREKGVKRFGLHTMVISSELRNE 198 Query: 176 SA------MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + M + +E+++LGGG + +R+ E +I Sbjct: 199 AFLFTAELMFNLAVEIKKRLGISLEFVNLGGGFGIPYRPEEEAIDVERVGSGIEALYKKI 258 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E G I L TT L + K+ + +D+ + + L Sbjct: 259 IEPAGLAGLAIKAESGRYITGPYGWLVTTALHEKKTYKDYIGLDACMANLMRPALYGAYH 318 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + G C D F + IGDRI D + + Sbjct: 319 HITVVGKEDAFCDHIYDITGSLCENNDKFAIDRKLPKIDIGDRIVIHDTGAHGHAMGFNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG+++ IR + DY+ L Sbjct: 379 NGKLRSAELLLREDGSVELIRRAETLGDYFATL 411 >gi|331017932|gb|EGH97988.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 412 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 57/399 (14%), Positives = 113/399 (28%), Gaps = 45/399 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D Q + + + A K + + L + SL E Sbjct: 17 GTPLWVYDGQLIKKRVQQLA-AFD----TVRFAQKACSNLHILRLLRDAGAAVDAVSLGE 71 Query: 63 VMLGH-EKFGGE-------THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 + F + + + V+ + ++ L++ A Sbjct: 72 LERALHAGFSAQNAQGTAGVVFTADVFDRATLQRVVEAQVEVNVGSIDMLHQLG--ALSP 129 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCE 168 ++ LRINP + + S+ G + ++ GL H Sbjct: 130 GHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHTHLQDALTLVHYYRLHLVGLHMHIGSG 189 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRL 218 + + + + IE IS GGG+ + D ++ Sbjct: 190 VD-YQHLQQVCSTMAELVVEMDHDIEAISAGGGLSVPYRAGELPINTSHYFAQWDHARKR 248 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE 277 E + +++ +EPG +V L + V VD+ + L Sbjct: 249 IEAHLGHPIRLEIEPGRFLVAQAGVLVSEVRATKHMGGKHFTLVDAGFNDLMRPSLYGSY 308 Query: 278 SATIYPNTGPYT-----AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325 + +V G C +GD+F E ++GD + F D Sbjct: 309 HEMSLITSRDEPLPMQETVVAGPLCESGDVFTQAEGGIVESRLLPVAQVGDYLVFHDAGA 368 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + R +D Sbjct: 369 YGASMSSNYNSRTHAAEVLVDDGQERLIRRRQPLDDLLR 407 >gi|269140254|ref|YP_003296955.1| diaminopimelate decarboxylase [Edwardsiella tarda EIB202] gi|267985915|gb|ACY85744.1| diaminopimelate decarboxylase [Edwardsiella tarda EIB202] gi|304560084|gb|ADM42748.1| Diaminopimelate decarboxylase [Edwardsiella tarda FL6-60] Length = 428 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 53/399 (13%), Positives = 115/399 (28%), Gaps = 45/399 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + Q + SL E Sbjct: 34 GTPLWVYDAALIERQIASLR-AFD----TIRFAQKACSNLHILRLMRQAGVKVDAVSLGE 88 Query: 63 VMLG-----HEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + E + D + + + L + +A Sbjct: 89 IERALVAGFRPGGDDEEIVFTADVIDEATLDRICALGITVNAGSCDMLRQLGRRA--SGH 146 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENK 170 + LRINP + + S+ G +D ++ + GL H Sbjct: 147 PVWLRINPGFGHGHSQKTNTGGENSKHGIWHQDLAQALALIDTYGLRLVGLHMHIGSGVD 206 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------- 223 + + + + + I+ IS GGG+ +D + + Sbjct: 207 -YDHLARVCDTLANQAIALGRDIQAISAGGGLSIPYRDGDAAVDVRHYYGLWDAARRRIA 265 Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279 + V++ +EPG +V L V + ++ V+ D+ + + Sbjct: 266 AHLGHPVRLEIEPGRYLVAQAGVLLAQVRAVKSMGQRHFVLADAGFNDLMRPAMYGSHHH 325 Query: 280 TIYPNTGPYTA-------MVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAG 325 +V G C +GD+F + ++GD + F D Sbjct: 326 ISLLPQDGRDVATPCIETVVGGPLCESGDVFTQREGGKVTSCALPAAQVGDWLVFHDTGA 385 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R ++ Sbjct: 386 YGASMSSNYNSRPLLPEVLVEGNKARLIRRRQRMDELLA 424 >gi|310657748|ref|YP_003935469.1| diaminopimelate decarboxylase [Clostridium sticklandii DSM 519] gi|308824526|emb|CBH20564.1| diaminopimelate decarboxylase [Clostridium sticklandii] Length = 421 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 67/398 (16%), Positives = 130/398 (32%), Gaps = 36/398 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y++ + + +D K A K F M + + G S Sbjct: 21 TPLYVMSQDIIEEKIDYIKVNFLDKYPRTYAYYASKAFLTKAMAKIIKKSEMGIDVVSYG 80 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA-QKLHKK 117 E+ + ++ K + I+ + +S+L + A ++ K Sbjct: 81 ELYTALDAGINPDKIMFHGNNKSKDELEFALERGIGRIVVDGISELKLLIELAGERFTAK 140 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 I LRI+P+V + S+ G E + I+SE + G FH + Sbjct: 141 ILLRISPNVEAHTHKYISTGQLDSKFGLSFASKDLDEAIELAIKSEHIDFKGFHFHVGSQ 200 Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 ++ I++ + +IE +++GGG + + + Sbjct: 201 LFDNEAHVESTKKAMELIKEIKDKYDYEIEDLNVGGGFGVRYTAEDEPMPLEYFTDAIME 260 Query: 225 Y-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 I++EPG IV TV + + + +D + + Sbjct: 261 EVIALIDKYEIIRPNIFIEPGRYIVAEAGITLYTVGSVKNIESVRKYICIDGGMADNPRP 320 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + A + V G+ C +GDI V+ GD ++ YN Sbjct: 321 ALYQAKYSACIANKMYDEDTELVTVAGKCCESGDILIWDINLPKVERGDILAVMGTGAYN 380 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + + ++ SY D N Sbjct: 381 YSMSSNYNKLAKPAVVMIHDKEDRLIVQRESYEDLLKN 418 >gi|238921148|ref|YP_002934663.1| diaminopimelate decarboxylase [Edwardsiella ictaluri 93-146] gi|238870717|gb|ACR70428.1| diaminopimelate decarboxylase, putative [Edwardsiella ictaluri 93-146] Length = 419 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 56/399 (14%), Positives = 117/399 (29%), Gaps = 45/399 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + Q + SL E Sbjct: 25 GTPLWVYDAALIERQIASLRTFD-----TIRFAQKACSNLHILRLMRQAGVKVDAVSLGE 79 Query: 63 VMLGH-EKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + F E + D + + + L + +A Sbjct: 80 IERALMAGFRPDADDEEIVFTADVIDEATLDRICALGITVNAGSCDMLRQLGCRASGHP- 138 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENK 170 + LRINP + + S+ G +D ++ + GL H Sbjct: 139 -VWLRINPGFGHGHSQKTNTGGENSKHGIWYQDLAQALALIDTYGLRLVGLHMHIGSGVD 197 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------- 223 + + + + + I+ IS GGG+ +D + + Sbjct: 198 -YDHLARVCDTLANQAIALGRDIQAISAGGGLSIPYRDGDASVDVRHYYGLWDAARRRIA 256 Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279 + V++ +EPG +V + L V + ++ V+ D+ + + Sbjct: 257 EHLGHPVRLEIEPGRYLVAQSGVLLAQVRAVKSMGARHFVLADAGFNDLMRPAMYGSHHH 316 Query: 280 TIYPNTGPYTAM-------VCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAG 325 V G C +GD+F + V++GD + F D Sbjct: 317 ISLLPQDGRDVTTPCIETVVGGPLCESGDVFTQREGGRVTSCALPAVQVGDWLVFHDTGA 376 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + D R ++ Sbjct: 377 YGASMSSNYNSRPLLPEVLVEGDSVRLIRRRQRMDELLA 415 >gi|298246004|ref|ZP_06969810.1| Orn/DAP/Arg decarboxylase 2 [Ktedonobacter racemifer DSM 44963] gi|297553485|gb|EFH87350.1| Orn/DAP/Arg decarboxylase 2 [Ktedonobacter racemifer DSM 44963] Length = 416 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 108/393 (27%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+Q + + + A+K + L + G SSL Sbjct: 21 PTPFHLYDEQGIRAAVRRMKRAFAWSESFTNYFAVKALPNPHILRILKEEGLGVDCSSLP 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L F GE + E I + +S + +++A + Sbjct: 81 ELVLAERVGFAGEEIMFTSNQTPASEYRKARELGAIINLDDISHIAYLEEQAGLPD--LL 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENK----- 170 + ++ G ++ K V H + Sbjct: 139 SFRYNPGPLRAGNAIIGDPKEAKYGLTYDQLFQAYASAKEKGVRRFGLHAMLASNELNVA 198 Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + +I++GGGI + + + + Q Sbjct: 199 YFLETARMLFDLVAALSREVGITFSFINMGGGIGIPYRPEQSAFDMETFGQELQALYTQK 258 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +E G I L TT + E K + +D+ + + L Sbjct: 259 IVANSLPPLRIVMECGRVITGPHGYLVTTAIHQKETYKRYIGLDACMTNLMRPALYGAYH 318 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F + GD + D + + Sbjct: 319 HITVLGKEDQPANEMYDVVGSLCENFDKFAIDRSLPEITPGDILIIHDTGAHGHAMGFNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + G I+ IR + +DY+ L Sbjct: 379 NGKLRSAELLLREGGDIQLIRRAETLDDYFCTL 411 >gi|150402373|ref|YP_001329667.1| diaminopimelate decarboxylase [Methanococcus maripaludis C7] gi|150033403|gb|ABR65516.1| diaminopimelate decarboxylase [Methanococcus maripaludis C7] Length = 436 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 64/398 (16%), Positives = 134/398 (33%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++ + + + N + K K + A K + L++ G Sbjct: 31 GTPLYVMSETQTVKNFTRYVDSFKEYSEKTGKEFIISFAYKANTNLAVTKLLSKLGCGAD 90 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113 S E+ + E +N K E + + +++S+L + A++ Sbjct: 91 IVSAGELYIAKLSNVPSEKIVFNGNCKLKEEIKMGIEAEIRAFNVDSISELVLINETAKE 150 Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLM 162 + K + R+NP+V ++ G E K + E + G+ Sbjct: 151 MGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESGIALETIKMAEKMENVKIVGIH 210 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216 H + F+ + + + + +I+ ++LGGG+ + Sbjct: 211 CHIGSQLTYISPFVEEARKIMDFVVSLKNEGIEIKDVNLGGGLGIPYDKNTKIPVQKDLS 270 Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHV 269 + + + LEPG ++V L TV + E +++D+ + + Sbjct: 271 KAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVKETPVAKWIMIDAGMNDMM 330 Query: 270 PDYLL--YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + Y E V G C + D+FG+ +++ D ++ DV Y Sbjct: 331 RPAIYEAYHEIVPCTIRDEKEVVSVAGGLCESSDVFGKDRELSKMEVKDTVAILDVGAYG 390 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 I+ N +N P + + N + D + Sbjct: 391 ISMANNYNSRGKPAMILTNEKEVSLIRVRETLADLISK 428 >gi|229490040|ref|ZP_04383893.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121] gi|229323141|gb|EEN88909.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121] Length = 473 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 57/406 (14%), Positives = 116/406 (28%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + K+ A K F + + S E Sbjct: 64 GTPLFVIDEDDFRSRCRDMARAF-GPDAKVHYASKAFLCGEIARWVADEGLSLDVCSGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E A + K A ++ ++ ++++ A + + Sbjct: 123 LAIALHADFPAERIAMHGNNKSVAELAAGVAAGVGHVVLDSSIEIDRLDRVAGEAGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + + ++ + GL H + Sbjct: 183 VLIRLTVGVEAHTHEFISTAHEDQKFGFSLAGGAAIDAVRRVFAADNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLKNIEKEFGHFI--------TQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + QI I LGGG+ + L Sbjct: 243 IFDVDGFEVAAHRVIGLLRDVVTEFGVEKTKQISIIDLGGGMGISYIPSDDPPPVDELAA 302 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDS 263 + +EPG AI T V I + + + VD Sbjct: 303 KLGHIVRNESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTIKDVTVGSSLTRRYISVDG 362 Query: 264 SVEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L E + P A + G+ C +GD+ + V GD + Sbjct: 363 GMSDNIRTSLYGAEYEAKLVSRTSEADPVVARIVGKHCESGDVVIRDTWMPEDVGPGDLL 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + D + Sbjct: 423 AVAATGAYCYSMSSRYNLLTRPAVVAVRDGVSRVILRRETVEDLLS 468 >gi|170737760|ref|YP_001779020.1| diaminopimelate decarboxylase [Burkholderia cenocepacia MC0-3] gi|169819948|gb|ACA94530.1| diaminopimelate decarboxylase [Burkholderia cenocepacia MC0-3] Length = 412 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 119/400 (29%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + SL E Sbjct: 16 GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + + A Sbjct: 71 IERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARIGEHA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + I+ IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGELRVDVGHYFSQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 + V+I +EPG +V TL T V ++ K+ + +D+ + + A Sbjct: 248 RHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 307 Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G C +GD+F + +IGD + D Sbjct: 308 VSVHAHDGGLPADRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407 >gi|167755248|ref|ZP_02427375.1| hypothetical protein CLORAM_00753 [Clostridium ramosum DSM 1402] gi|237734996|ref|ZP_04565477.1| diaminopimelate decarboxylase [Mollicutes bacterium D7] gi|167705298|gb|EDS19877.1| hypothetical protein CLORAM_00753 [Clostridium ramosum DSM 1402] gi|229381772|gb|EEO31863.1| diaminopimelate decarboxylase [Coprobacillus sp. D7] Length = 435 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 132/398 (33%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ + + + + K L A K F+ ++ +Y G S Sbjct: 30 GTPLYVMSEGHIRHQFNKLKTKMIEKYENTLPLFASKSFSCIAIYKIAKEYGVGIDCVSA 89 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + + F + ++ K + + + + +++ ++ A +L K Sbjct: 90 GEISVALKSGFDPKKIYFHGNNKLPSEIEYALENGVENFVIDNFYEIDLVQEIASRLGVK 149 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 I +RI P V ++ G K I++ N +G+ H Sbjct: 150 INGIVRITPGVYAGGHDYIRVGAKDTKFGFSSHDNTYLKAIKKVIDAPNINFDGIHCHVG 209 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + + + ++ + + F I ++ GGG + + + Sbjct: 210 SQIEDIQAYVLAMNKFVEIAYEIYDIFGIVINKLNAGGGFGIAYTAADNPLEFETVVDTI 269 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVL------DISENIKNLVIVDSSV 265 + + +EPG V N TV DI + I + ++ Sbjct: 270 MEIITKGFDARGLKRPMVLVEPGRYCVGNAGITLYTVGSSKYIKDIRDYITVDGGMTDNI 329 Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + + A + V G++C +GDI + + + GD ++ Sbjct: 330 RSSLYAAKYDAIIANKAEMPTDHLITVAGKNCESGDILIKDIMLQDPEPGDILAMFSTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y+ + + +N + P + + IR +++D Sbjct: 390 YHYSMSSNYNQLPKPAVVFTYEGKDREVIRRQTFDDLV 427 >gi|237736701|ref|ZP_04567182.1| diaminopimelate decarboxylase [Fusobacterium mortiferum ATCC 9817] gi|229420563|gb|EEO35610.1| diaminopimelate decarboxylase [Fusobacterium mortiferum ATCC 9817] Length = 434 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 66/400 (16%), Positives = 137/400 (34%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D++ + +N+ K +++ A K F A M + +Y + S Sbjct: 29 GTPLYIMDQELIESNMRKYKENFKSDKFQTQIVYASKAFLAKAMCQLVEKYDMDIDAVSG 88 Query: 61 YEVMLGH-EKFGGET-HAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + H + + V +II + +++ + +KK Sbjct: 89 GELYTIKVSGLDMKRVHMHGNNKTLEELEMCVDYGIGSIIIDNETEIENLSYVCAQKNKK 148 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 I LRIN + ++ S+ GE + ++ + G H Sbjct: 149 IKAMLRINIGIDAHTHEYIKTSKHSSKFGESIFDEKLVGIVEKIVKDKNIEFLGFHCHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP--------VKDF 214 + M+ +K +I I+LGGG + ++ Sbjct: 209 SQIFDTKAFHEGIETMVVETKKIADTLGIKIPEINLGGGFGVYYTENDVEVDIEKFMRSM 268 Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + +++ +++ ++ +EPG +IV N + TV I + + +D + ++ Sbjct: 269 IEHIEKSLDEHKLEIEKVSIEPGRSIVGNAGSTLYTVGGIKQTYGGVKYMFIDGGMTDNI 328 Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + V G+ C +GD+ + + GD + Sbjct: 329 RPALYQAEYEAVIANRLDEKEREVVTVAGKCCESGDLIIKGKSLPKGEKGDLLLVSTTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + P + AIR S+ D N Sbjct: 389 YGYSMSSNYNKLARPAVVFVKNGKASLAIRRESFEDLIRN 428 >gi|73667159|ref|YP_303175.1| diaminopimelate decarboxylase [Ehrlichia canis str. Jake] gi|72394300|gb|AAZ68577.1| diaminopimelate decarboxylase [Ehrlichia canis str. Jake] Length = 421 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 69/384 (17%), Positives = 128/384 (33%), Gaps = 22/384 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y + NN N + A+K + + LN G S Sbjct: 30 IGTPVYCYSLNAIKNNYRQFQENLPN-NSIICYAVKSNSNLSILSLLNSLGAGADVVSEG 88 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 E+ ++ K + + + ++ +L+ A K + Sbjct: 89 EIRRAIAVGISPNKIVFSGVGKTEQEISFALDNRILQFNVESIEELSLINTIACKKNIIA 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLMFHNNCEN-- 169 + +RINP++S ++ G + + N + G+ H + Sbjct: 149 PVSIRINPNISADTNDKITTGLKVNKFGIPEELLDQIFNNNFIGIRIIGISVHIGSQISN 208 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEK 224 F +K I K F QI + LGGG+ K+ + ++ LK+ E Sbjct: 209 LNIFQNTIDKIKKIVKIFEQRNMQIIRVDLGGGLGIPYKNADVFPTIPEYANLLKKNFEN 268 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283 + QI EPG A++ NT L T VL N + I+ D+ + + L E I Sbjct: 269 ENYQIICEPGRALIGNTGVLLTKVLYHKHNQEKSHIILDAGMNDLIRPALYNAEHTIIPA 328 Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + G C + D F + ++ G+ ++ Y + + +N + Sbjct: 329 ISTSTPLQLYDIVGPICESDDTFAYNYHINNLQNGEIVAICTTGAYGSSMSSNYNSRPLV 388 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + +Y D Sbjct: 389 PEVMVSNSNYDIIRHRQTYEDMLK 412 >gi|226307410|ref|YP_002767370.1| diaminopimelate decarboxylase [Rhodococcus erythropolis PR4] gi|226186527|dbj|BAH34631.1| diaminopimelate decarboxylase [Rhodococcus erythropolis PR4] Length = 473 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 57/406 (14%), Positives = 116/406 (28%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + K+ A K F + + S E Sbjct: 64 GTPLFVIDEDDFRSRCRDMARAF-GPDAKVHYASKAFLCGEIARWVADEGLSLDVCSGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E A + K A ++ ++ ++++ A + + Sbjct: 123 LAIALHADFPAERIAMHGNNKSVAELAAGVAAGVGHVVLDSAIEIDRLDRVAGEAGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + + ++ + GL H + Sbjct: 183 VLIRLTVGVEAHTHEFISTAHEDQKFGFSLAGGAAIDAVRRVFAADNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLKNIEKEFGHFI--------TQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + QI I LGGG+ + L Sbjct: 243 IFDVDGFEVAAHRVIGLLRDVVTEFGVEKTKQISIIDLGGGMGISYIPSDDPPPVDELAA 302 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDS 263 + +EPG AI T V I + + + VD Sbjct: 303 KLGHIVRNESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTIKDVTVGSSLTRRYISVDG 362 Query: 264 SVEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L E + P A + G+ C +GD+ + V GD + Sbjct: 363 GMSDNIRTSLYGAEYEAKLVSRTSEADPVVARIVGKHCESGDVVIRDTWMPEDVGPGDLL 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + D + Sbjct: 423 AVAATGAYCYSMSSRYNLLTRPAVVAVRDGVSRVILRRETVEDLLS 468 >gi|317970388|ref|ZP_07971778.1| diaminopimelate decarboxylase [Synechococcus sp. CB0205] Length = 459 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 52/394 (13%), Positives = 107/394 (27%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ L N + L A K ++ + + G + S Sbjct: 54 GTPLYVLDEATLRGNAQAYRKALASHYPGSALALYASKANSSLAITAVVASEGLGLDAVS 113 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + E ++ K E T++ + S L + Sbjct: 114 AGELLTAVQGGMPPERIVFHGNNKSLEELQLAADLGVTVVADNWSDLELLASLGLSQPVR 173 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR P + S+ G V+GL H + Sbjct: 174 LMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEPVLRHLQGCSWALVSGLHAHIGSQIF 233 Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 + + + +++GGG+ + + Sbjct: 234 ELQPHRDLAAVMADALKLARELGHPVSDLNVGGGLGIRYVESDDPPSIDEWVRTVAEAVA 293 Query: 225 --------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYLL 274 ++ EPG ++V +V E VD + + Sbjct: 294 GACQDRGLDLPRLLCEPGRSLVATAGVTLYSVGSRKEIPGIRTYLSVDGGMSDNPRPITY 353 Query: 275 YQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + + T + G+ C +GD+ + P + GD ++ YN + Sbjct: 354 QSLYTAVLADRPEAEASDTVTLAGKHCESGDVLLKDLALPPAQAGDVLAVFATGAYNASM 413 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N I P + + R + Sbjct: 414 ASNYNRIPRPAAVMVHDGMAELVQRRELPEELLR 447 >gi|167915367|ref|ZP_02502458.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 112] Length = 1086 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 182/373 (48%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 706 LDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 765 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 766 EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 824 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 825 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 884 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 885 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 943 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 944 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1003 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1004 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1063 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1064 AAVQRFSYEDFLR 1076 >gi|302853272|ref|XP_002958152.1| DAP decarboxylase [Volvox carteri f. nagariensis] gi|300256513|gb|EFJ40777.1| DAP decarboxylase [Volvox carteri f. nagariensis] Length = 462 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 58/381 (15%), Positives = 120/381 (31%), Gaps = 31/381 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 ++P+YL K ++++N + A+K + L G S E Sbjct: 81 ESPFYLYSKNRIMHNYQAYKKALEGLSSLPCYAVKANNNLIIMKELAAAGAGAVLVSGNE 140 Query: 63 VMLGHE-KFGGET-HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKI 118 + + F E++ I ++ L A+K K+ Sbjct: 141 LKMAMAAGFDPSRTIFNGNGKLPWELELAAEKGVLINIDSEFDLQNIAAAARKTGKKVKV 200 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKS 171 LRINP V S+ G + + + + G+ H Sbjct: 201 LLRINPDVDPQVHPYVSTGLAGSKFGIRNSHIGWFLEAIRAEPLLELVGVHSHLGSTITK 260 Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSE 223 F ++ K ++++++GGG+ D +++ + Sbjct: 261 VNIFRDAAVIMCEFVKMIRSEGFNLQYLNIGGGLGIDYSHQGQVLPTPTDLIDTVRDIVK 320 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + + +EPG ++ + K+ +++D S+ + L Sbjct: 321 ELGLTLVIEPGRSMGRR--------RVKTNGNKHFIVIDGSMATLIRPSLYGAYQHIELT 372 Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T V G C +GD G+ + GD + D Y ++ + +N P Sbjct: 373 KPSNAPMETFDVVGPICESGDYLGKDRQLPTPQPGDGLVVHDAGAYCMSMASNYNLKMRP 432 Query: 341 TIAVKNVDGTIKAIR-EFSYN 360 + G ++ IR E + Sbjct: 433 AEYLVEEGGKLRKIRHEETLE 453 >gi|161833742|ref|YP_001597938.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri GWSS] gi|152206232|gb|ABS30542.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri GWSS] Length = 399 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 64/383 (16%), Positives = 120/383 (31%), Gaps = 23/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D ++ +K+ A K + + + G + S+ Sbjct: 15 GTPLYVYDANQIEFQYKLIKKYFFYIENLKINYACKANTNISILNFFKKLGSGLDTVSIQ 74 Query: 62 EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV +G F + Y EI + I + +S L + + + IG Sbjct: 75 EVEIGLKAGFKPKEIIYTPNGVSLSEIKKAIKAGVLINIDNLSLLEQIGH--ENPNYPIG 132 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFL 173 +RI P++ S+ G K +E+ V G+ H + Sbjct: 133 IRITPNIIGGGNKKISVGHINSKFGISYYQLPNIKRIVENTGIKVEGIHMHTGSDIIDLE 192 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------SV 227 F + F ++++I G G K L F +K ++ Sbjct: 193 VFLQGADILLNVASSFN-ELKYIDFGSGFKVPYHKNDTKTDLDMLGVFFKKKISRVCKNI 251 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY---P 283 +I EPG+ +V+ + V I VDS + P Sbjct: 252 KIVFEPGKFLVSESGYFIVKVNVIKHTTSTVFACVDSGFNHFIRPMFYDSYHQIDNLSNP 311 Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + + V G C + D F ++ GD + F + Y + + +N P+ Sbjct: 312 SGKLRSYTVVGYICES-DTFCVNIKINEIREGDILCFRNAGAYCFSMSSNYNSRYRPSEV 370 Query: 344 VKNVDGTIKAIREFSYNDYYNNL 366 + + + R + D + Sbjct: 371 IIYNNKSFLIRRRENMQDLLKKM 393 >gi|158333611|ref|YP_001514783.1| diaminopimelate decarboxylase [Acaryochloris marina MBIC11017] gi|158303852|gb|ABW25469.1| diaminopimelate decarboxylase [Acaryochloris marina MBIC11017] Length = 460 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 54/399 (13%), Positives = 117/399 (29%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L + ++L A K ++ + + G S Sbjct: 52 GSPLYIVDELTLRTACQQYRLSFQKFYPGPSQILYASKAWSCMAISALVANEGLGLDVVS 111 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDK-----AQ 112 E+ ET ++ K + +C II + +L + + A Sbjct: 112 GGELYTALQAGVDPETIYFHGNNKSVPELEMALSCGCTIIADNWLELEQLTELLDTIDAL 171 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHN 165 ++ LRI P + S+ G ++ G H Sbjct: 172 PNPPRVMLRITPGIECHTHEYIRTGHLDSKFGFDPNQIDQALSFAQKNPQITWVGFHAHI 231 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + + I + + +++GGG+ + + Sbjct: 232 GSQIFELQPHQDLTSVIVEWLAKAQALGLSMNELNIGGGLGIRYVESDDPPSIAQWSEIV 291 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL------DISENIKNLVIVDSSV 265 + + ++ EPG ++V + TV DI + + + Sbjct: 292 CNGISQACQTANIPLPKLLCEPGRSLVGTSCITAYTVGAKKNIPDIRTYLSVDGGMSDNP 351 Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + A ++ V G+ C +GD+ + P + GD + Sbjct: 352 RPITYQSVYSAAIANHMDSSATEIVTVAGKHCESGDVLLKDIPLPPSQPGDILVVMGTGA 411 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N I+ P + ++ +Y D Sbjct: 412 YNYSMASNYNRISRPAAVLVQNGDANLILKRETYQDLIR 450 >gi|24380094|ref|NP_722049.1| putative diaminopimelate decarboxylase [Streptococcus mutans UA159] gi|290579927|ref|YP_003484319.1| putative diaminopimelate decarboxylase [Streptococcus mutans NN2025] gi|24378089|gb|AAN59355.1|AE015000_13 putative diaminopimelate decarboxylase [Streptococcus mutans UA159] gi|254996826|dbj|BAH87427.1| putative diaminopimelate decarboxylase [Streptococcus mutans NN2025] Length = 416 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 61/393 (15%), Positives = 122/393 (31%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N+G K A+K + L + G ++ Sbjct: 19 PTPFHLYDEKGIRETARAVNKAFAWNSGFKEFFAVKATPNPTILKILQEEGCGVDCATDV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKI 118 E+ + + F ++ D + + + A L + + Sbjct: 79 ELKMADKLGFDRSAISFTSN--DTQASEFVFARSINATINLDAYEHIAFLEEAAGLPETV 136 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVN--GLMFHNNCEN--- 169 LR NP +S + S+ G + + V GL Sbjct: 137 SLRFNPGGVFSLGTDIMDHPEESKFGMTKEQLFQGYQDLKDKGVKSFGLHAFLASNTVTN 196 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + + +++I+L GGI ++ + E + Sbjct: 197 DYYPTLAAQLFELAVEIKNELGISLDFINLSGGIGIDYSAADEQNDIAVIGEGVHQKFDD 256 Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I Y E G ++ + L T VL + + ++ V VD+S + + Sbjct: 257 ILVPNGLSQIKIYTELGRYMLASHGHLITKVLHLKDTYRHYVGVDASAVNLLRPAMYDAY 316 Query: 278 SATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + T + G C D F + ++GD + D + + + Sbjct: 317 HHITNISNPQGTVQVVDIVGSLCENNDKFAKRRELPEARVGDTLVIHDTGAHGFSMGYNY 376 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG + IR + DY+ L Sbjct: 377 NGRLRSAEILLREDGQTQMIRRAETPEDYFATL 409 >gi|148241889|ref|YP_001227046.1| diaminopimelate decarboxylase [Synechococcus sp. RCC307] gi|147850199|emb|CAK27693.1| Diaminopimelate decarboxylase [Synechococcus sp. RCC307] Length = 463 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 53/396 (13%), Positives = 108/396 (27%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y+ID++ L + G L A K ++ + + G + S Sbjct: 56 GTPLYVIDERSLRQACTAYREALERHYPGPSLAVYASKANSSLAITAVVASEGLGLDAVS 115 Query: 60 LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ E E + E+ + N T++ + + ++ AQ + Sbjct: 116 AGELLTALEGGMPPERIVLHGNNKSSEELALAVQNGVTVVVDNWHDITLLQELAQGRTEP 175 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE 168 + L + P + S+ G + V GL H + Sbjct: 176 VALMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEQVLTHLAGCRWARVQGLHAHIGSQ 235 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + + + +++GGG+ + + Sbjct: 236 IFEVEPHRDLAAVLADALVLARRLGHEPSDLNVGGGLGIRYVASDDPPSIDGWVQVVAEA 295 Query: 226 SVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDY 272 V EPG ++V TV + V + + Sbjct: 296 MVAACRERNLELPRLLCEPGRSLVAPAGVTLYTVGSRKQIPDLNTYVAVDGGMSDNPRPI 355 Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 E + T + G+ C +GD+ + + GD + YN Sbjct: 356 TYQSEYTACLADRPGAEATETVTLVGKHCESGDVLLKQLPLPATEPGDVLVVLATGAYNA 415 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + R ++ Sbjct: 416 SMASNYNRIPKPAAVLVADGCAELVQRRERPDELLR 451 >gi|225619871|ref|YP_002721128.1| diaminopimelate decarboxylase [Brachyspira hyodysenteriae WA1] gi|225214690|gb|ACN83424.1| diaminopimelate decarboxylase [Brachyspira hyodysenteriae WA1] Length = 412 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 53/385 (13%), Positives = 115/385 (29%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ K +LN + + V ++ A+K + + + G S+ Sbjct: 24 GTPFYIYSKNDILNKIRFLKEVFSPLNDVLIVYAIKAENNLSILKMMAEEGIGADVVSIG 83 Query: 62 E-VMLGHEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKK- 117 E + E ++ K E N ++ + + + A++L K Sbjct: 84 ETLKYIKAGGKAENVVFSGVAKTEEEIRKSIELNIKRFNIESIPEAIRINNIAKELKNKV 143 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169 +R+NP+V ++ G + + L H + Sbjct: 144 KCSIRVNPNVDAHTHEKITTGVNGNKFGISIKTIRENSELLKSLSNIEIESLSMHIGSQM 203 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFS 222 F + + G I I +GGG + F Sbjct: 204 TDAEPFYKAILVMRDLIGEINSMGFNITDIDIGGGYGVRYNRDHSGFDFNKFKAESINLL 263 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI 281 ++ ++++ EPG V + L V I E + ++ + + +V + + Sbjct: 264 KEMNLRVTTEPGRYFVAESGALIMRVEYIKEELGRKYVILNGGMNDYVRVAMYDAYNEIY 323 Query: 282 YPNTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 G C + D F ++ GD ++ D Y + + +N Sbjct: 324 PLVKKDNVSNYDFVGPICESSDFFAYDRESSVLEQGDYVALLDAGAYGFSMSSNYNSRLF 383 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + + ++ D Sbjct: 384 IPQVMIDDKKHYIIRKRQTFEDMIR 408 >gi|212696490|ref|ZP_03304618.1| hypothetical protein ANHYDRO_01028 [Anaerococcus hydrogenalis DSM 7454] gi|212676510|gb|EEB36117.1| hypothetical protein ANHYDRO_01028 [Anaerococcus hydrogenalis DSM 7454] Length = 436 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 71/400 (17%), Positives = 139/400 (34%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y+ D++ + + + + K+ + ++ A K F+ + LN+Y S Sbjct: 28 KTPLYIYDQKLIKDTASSFVENFKSEKFETEIIYATKAFSNLYVLGLLNEYNLVFDCVSK 87 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK 117 E+ + GE ++ K E + D II ++ + + + KK Sbjct: 88 EEIFVALKAGIKGENIHFHGNNKTKEELIYAIDNDISLIIIDSEDEYYLLDEILKDKKKK 147 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 LRINP V + S+ G +D IE+ N+ G H Sbjct: 148 ASCLLRINPDVKTDTHKFIQTSNADSKFGLNIRDENTEKIIEKIIENPNINLLGFHAHIG 207 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + K+ F M + + F ++LGGG + ++ + Sbjct: 208 SQVKNLEFFKEEAKIMAEFTKNIQDKFKKCFSHLNLGGGFGTRENLEDEDLDLEKFLKGL 267 Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269 + ++ +EPG ++++ ++ + I+ L+ VD + ++ Sbjct: 268 IVFMEDLFDKNKLSIKNLSIEPGRSLISKAGSILYRLGSSKITMEGYPLIFVDGGMSDNI 327 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + I N T V G+ C +GDI E V+ D + Sbjct: 328 RPSLYGAKYSAILANKLDNEKNQTYRVGGKLCESGDILIEKVKIPKVERDDLLLVPFAGA 387 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + P + A++ S D Sbjct: 388 YTYSMSSNYNKLLKPAVVFVEDGKDYCAVKRQSLEDLIKR 427 >gi|218886112|ref|YP_002435433.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757066|gb|ACL07965.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 421 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 55/389 (14%), Positives = 109/389 (28%), Gaps = 31/389 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ + L + + G + + K + + + + S E Sbjct: 28 GSPLYVYSEALLRKRCRDMKALSSHPGFFVNYSAKANTNLSLLRIVREEGLVVDAMSPGE 87 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIGL 120 + + F + Y A + ++ +++SQL K+ + Sbjct: 88 IHVNKAAGFTPDQILYVCNNVSEAELANAVSHGLLVSVDSLSQLETLGRV--NRGGKVMV 145 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA--- 177 R NP + ++ G + +E++ + + Sbjct: 146 RFNPGIGAGHHQKVVTAGKATKFGVDPSEASLAELRAILARHDMTLAGINQHIGSLFLEP 205 Query: 178 ----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----------CQRLKEFSE 223 + +E I GGG + Y + + +SE Sbjct: 206 EGYVAAADFLLSVAEKFDTVEVIDFGGGFGIPYRKYEDQPRLDLAATAERLHALISGWSE 265 Query: 224 K--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + Y + Y+EPG +V L TV N + + ++Y I Sbjct: 266 RTGYKGRFYIEPGRYVVAECGLLLGTVHATKNNGPTRYVGTDLGFNVLARPVMYDAHHDI 325 Query: 282 YPNTGP-------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C +GDI ++ GD + D Y + + Sbjct: 326 EVYRNNGTPDAALHPQTVVGNICESGDIMARERQLPAIQEGDILGVLDAGAYGYAMSSTY 385 Query: 335 NGINMPTIAVKNVDGT-IKAIREFSYNDY 362 N P + +DG R D Sbjct: 386 NQRLRPAEVLIGLDGEPRLIRRREELADL 414 >gi|326386636|ref|ZP_08208258.1| diaminopimelate decarboxylase [Novosphingobium nitrogenifigens DSM 19370] gi|326208951|gb|EGD59746.1| diaminopimelate decarboxylase [Novosphingobium nitrogenifigens DSM 19370] Length = 419 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 69/375 (18%), Positives = 116/375 (30%), Gaps = 23/375 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP Y+ + L + K+ A+K + L G S Sbjct: 25 VGTPVYVYSRATLTRHARVFRDALSILPATKIAFAVKSNPNLAVLKVLAAEGYGADVVSG 84 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ E ++ K I A+ + + + + + AQ+L Sbjct: 85 GEMERALAAGMPAEGIVFSGVGKTEAEMIRALEAGIGQFNLESAEEGLELAELAQRLGKT 144 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCE 168 LR+NP V + ++ G + + GL H + Sbjct: 145 ATCALRVNPDVDAGTHGKISTGKAENKFGVPFDRAADIFARLSAEPGLAMRGLALHIGSQ 204 Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEF 221 S A I +E I + LGGG+ K V + + Sbjct: 205 LSSLAPLEAAFTKIGGLMREIRAAGHAITHMDLGGGVGVPYKAGDVFPQPEEYAAMIARV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278 + + V + EPG I NT L T V+ + E + + +V D+++ L Sbjct: 265 TADWGVTLMFEPGRVITGNTGVLVTRVVRVKEGVGHPWVVVDAAMNDLARPALYDAWHDF 324 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 A + PN TA + G C + D F V GD F Y N +N Sbjct: 325 AAVTPNGQTITANIVGPICESSDTFAMARDIDEVARGDLAVFRTAGAYGATMANTYNSRP 384 Query: 339 MPTIAVKNVDGTIKA 353 M + + + Sbjct: 385 MVPEVMVDGERWAVV 399 >gi|302809938|ref|XP_002986661.1| hypothetical protein SELMODRAFT_182543 [Selaginella moellendorffii] gi|300145549|gb|EFJ12224.1| hypothetical protein SELMODRAFT_182543 [Selaginella moellendorffii] Length = 501 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 67/403 (16%), Positives = 124/403 (30%), Gaps = 43/403 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K +L N + + A+K + + G S E+ Sbjct: 94 PFYLYSKPQLSRNFLAYQSALQGISSIVGYAIKANNNVKILEHFRSLGSGAVLVSGNELR 153 Query: 65 LGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120 L F +N E+ N + ++ L + K ++ L Sbjct: 154 LALHAGFDPTRCVFNGNGKLPEELVLAAQNDVLVNIDSEFDLAHIVEAGKIANKCVRVLL 213 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCEN--- 169 RINP V S+ G + + + + G H Sbjct: 214 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEIKQHPNEVKLVGAHCHLGSTITKA 273 Query: 170 ----------------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----- 208 F + ++ E ++++++GGG+ Sbjct: 274 SISFFLFLLRKCVPQVNIFRDAALLMVQYMDEIKSQGFDLKYLNIGGGLGIDYYHTGAVL 333 Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEA 267 +D +++ + + +EPG ++V N L V + N KN +++D S+ Sbjct: 334 PTPRDLVDTVRDLVVSRGLTLIMEPGRSLVANAAALVNRVTGVKTNGNKNFIVIDGSMSE 393 Query: 268 HVPDYLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 + L T V G C + D G+ K GD I D Sbjct: 394 LIRPSLYDAYQHIELVAPAGSDAEVKTYDVVGPVCESADFLGKNRELPTPKRGDGIVVHD 453 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 Y ++ + +N P DG+I IR +++D+ Sbjct: 454 AGAYCMSMASTYNLKMRPPEYWIEDDGSITKIRHAETFDDHLR 496 >gi|260590851|ref|ZP_05856309.1| diaminopimelate decarboxylase [Prevotella veroralis F0319] gi|260537202|gb|EEX19819.1| diaminopimelate decarboxylase [Prevotella veroralis F0319] Length = 385 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 74/373 (19%), Positives = 134/373 (35%), Gaps = 28/373 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I TP+Y D L L K+ G + A+K A + + ++Q G S Sbjct: 13 IDTPFYYYDCDLLRETLHVIEEEASKHKGYIVHYAVKANANKKVLNLISQTGMGADCVSG 72 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQK--LH 115 E+ E F E Y K + + D FN + +L AQK Sbjct: 73 GEIQRCLECGFPSEKIVYAGVGKADWEINLGLDNDIFCFNVESEEELEIINKLAQKRGKI 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE 168 + LRINP V ++ G + +E N+ GL FH + Sbjct: 133 ASVCLRINPEVGAHTHANITTGLAENKFGIALRYVPSIISAALEITHINLIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 + F A + +I+ + ++E I++GGG+ + + Sbjct: 193 IMEMQDFQALCARINDIQDDLEKRGVKVENINVGGGLGIDYNDPEGHPIPDFQSYFNTFA 252 Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277 + + + +++ E G ++V +L T L + + + IVD+ + + LYQ Sbjct: 253 KHLKLRKEQKVHFELGRSVVGQMGSLITRTLYVKQGKSRQFAIVDAGMSDLLRPA-LYQA 311 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I + + V G C + D+F + V GD ++ Y + + + Sbjct: 312 HHRIVNLSNTDDLQSYDVVGPICESSDVFAKEVSLPTVHRGDLLAIRSAGAYGESMASQY 371 Query: 335 NGINMPTIAVKNV 347 N +PT + + Sbjct: 372 NCRKLPTGYMSDE 384 >gi|163814909|ref|ZP_02206297.1| hypothetical protein COPEUT_01060 [Coprococcus eutactus ATCC 27759] gi|158449848|gb|EDP26843.1| hypothetical protein COPEUT_01060 [Coprococcus eutactus ATCC 27759] Length = 418 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 63/392 (16%), Positives = 117/392 (29%), Gaps = 30/392 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I TP+++ D++ + N N G K A+K + L + GT SSL Sbjct: 18 IPTPFHIYDEKGIRENARKLYKAFSWNKGFKEYFAVKATPNPTILKILKEEGCGTDCSSL 77 Query: 61 YEVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+M+ F G+ ++ E TI + + ++ + A K Sbjct: 78 TELMMSDKMGFKGDEIMFSSNDTPAEEFVLAKKLNATINLDDFTHIDFLEKSAGIPEKIC 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCE 168 + D ++ G IE+ K V H Sbjct: 138 CRFNPGGKFSISTTIMDNPG-DAKYGMTKDQIIEAYKILKAKGVKRFGMHAFLASNTVTN 196 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + ++++I+L GG+ + + E K + Sbjct: 197 EYYPTLAKILFETAVEIKEKTGVKLDFINLSGGVGIPYTPDKEPNDIMVIGEGVRKVYEE 256 Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I+ E G ++ L TT + K + VD+ + + Sbjct: 257 VLVPAGMGDVAIFTELGRFMLAPYGHLVTTAIHEKHTHKEYIGVDACAVNLMRPAMYGAY 316 Query: 278 SATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + V G C D F + +GD + D + Sbjct: 317 HHITVLGKENEPCDHKYDVTGSLCENNDKFAIDRMLPKIDMGDILVIHDTGAHGFAMGYN 376 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 +NG + DG+ + IR + DY+ Sbjct: 377 YNGKLKSAEVLLRPDGSWRLIRRAETPEDYFA 408 >gi|254185262|ref|ZP_04891851.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1655] gi|184215854|gb|EDU12835.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1655] Length = 1137 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 182/373 (48%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 757 LDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 816 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 817 EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 875 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 876 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 935 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 936 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 994 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 995 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1054 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1055 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1114 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1115 AAVQRFSYEDFLR 1127 >gi|251796357|ref|YP_003011088.1| diaminopimelate decarboxylase [Paenibacillus sp. JDR-2] gi|247543983|gb|ACT01002.1| diaminopimelate decarboxylase [Paenibacillus sp. JDR-2] Length = 442 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 125/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + + + K +G ++ A K F+ M +Q S Sbjct: 30 GTPLYIVDETLIRQRANEYVSAFKESGLKFQVAYASKAFSVMAMCAIADQEGLSLDVVSD 89 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F ++ D A+ +N + + +L A + Sbjct: 90 GELYTALQAGFPAARIHFHGNNKTPDEINMALDANIGCFVVDNFVELRMLNALAADKGKK 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 KI RI P V + S+ G + ++ +E + G+ H Sbjct: 150 VKILFRITPGVEAHTHEYISTGQEDSKFGFDLGNGAAKQAIQEALELSNLEILGVHSHIG 209 Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F ++ + + I+LGGG + + Sbjct: 210 SQIFEVDGFRMAVDKVVAFAVQIRDELGLTFKVINLGGGFGIRYVEGDTPLPVAQYVAAI 269 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 +E +I++EPG +IV + T TV + + + + + Sbjct: 270 TDAVISNFSAAEFPLPEIWVEPGRSIVGDAGTTLYTVGTMKDIPGVRKYIAVDGGMMDNP 329 Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N T + G++C +GD + GD ++ Sbjct: 330 RPALYQSQYEAILANRANEANTETVTIAGKACESGDKLIIDLELPKAETGDLLAVSCTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N P + + ++ S + N Sbjct: 390 YNYSMASNYNRFRRPAVVFVKDGQSDLVVQRESLENIVGN 429 >gi|254456643|ref|ZP_05070072.1| diaminopimelate decarboxylase [Candidatus Pelagibacter sp. HTCC7211] gi|207083645|gb|EDZ61071.1| diaminopimelate decarboxylase [Candidatus Pelagibacter sp. HTCC7211] Length = 404 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 135/361 (37%), Gaps = 21/361 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +L N++ ++ + A+K + + ++ G S E Sbjct: 23 GTPTYCYSHARLKKNINNFQKNFRSFSPLICFAVKSNTNVNLIREIKKFGLGADVVSKGE 82 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK-- 117 +M+ + ++ K E I + S++ + A+ +K Sbjct: 83 LMMALKAGVSPKKIVFSGVGKTSEEINFAVEKKILLINAESESEIREIDRVAKIKKRKVK 142 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 IG+R+NP+ + ++ G K + S+ ++ L H + Sbjct: 143 IGIRLNPNTDAKTLSQISTGKKDNKFGVNEKTFFKLVNFCKSSKNIDLKCLSVHIGSQIL 202 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEKYS 226 + + MLK I++ + E+I LGGG+ + K + + +K+F +K+ Sbjct: 203 DYKPYEKMLKVIDRIIHKINHKFEFIDLGGGMGISYKYEDKKLNYSKYSEIIKKFLKKHK 262 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES----ATI 281 +I EPG +I+ +T L + ++ I +N I+ D+++ + L + Sbjct: 263 SKIIFEPGRSIIGDTGILISKIIYIKKNDSKNFIILDAAMNDLMRPALYGAHHKILPSIK 322 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T G C + D F + ++ D I DV Y ++ + +N P+ Sbjct: 323 SKKKSNKTYEFVGPICESTDKFNTLKNFQELEEKDLIVICDVGAYGMSLSSNYNVRLKPS 382 Query: 342 I 342 Sbjct: 383 E 383 >gi|94497890|ref|ZP_01304455.1| diaminopimelate decarboxylase [Sphingomonas sp. SKA58] gi|94422618|gb|EAT07654.1| diaminopimelate decarboxylase [Sphingomonas sp. SKA58] Length = 421 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 60/379 (15%), Positives = 114/379 (30%), Gaps = 24/379 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP Y+ L ++ + + A+K + TL + G S Sbjct: 25 VGTPVYVYSTAALERHVGVFREGLAQLSDPLIAFAVKANPNAAVLATLARLGLGADVVSA 84 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E++ ++ K + A+ + + A Sbjct: 85 GELLRAVAAGIPASRIVFSGVGKTAEEMRIALDHGIYQFNLESEPEAEMLSQVAAAMGKR 144 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168 + RINP V + ++ G ++S +V G+ H + Sbjct: 145 APVAFRINPDVDAGTHAKISTGKSENKFGIPYDRALDSYAAARDLPGLDVQGVAVHIGSQ 204 Query: 169 NKSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKE 220 A + + I LGGG+ D+ + Sbjct: 205 LTDLAPLEAAFVKVGALIEVLRAAGHDIRTADLGGGLGVPYDPAQPLPPSPADYGAMVCR 264 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 ++ + V++ EPG IV N L + V+ + + VIVD+++ + L Sbjct: 265 VTQSWPVRLMFEPGRVIVGNAGVLLSRVIRVKQGAQAPFVIVDAAMNDLMRPSLYDAWHD 324 Query: 280 T--IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + P+ TA V G C GD F V+ G+ ++F Y +N Sbjct: 325 IRTVKPSGDRATANVVGPVCETGDTFAMHRDMDVVRAGELVAFMTAGAYGATMAGTYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIRE 356 + + + D Sbjct: 385 PLTPEVLVSGDKWAVVRER 403 >gi|262038388|ref|ZP_06011765.1| diaminopimelate decarboxylase [Leptotrichia goodfellowii F0264] gi|261747606|gb|EEY35068.1| diaminopimelate decarboxylase [Leptotrichia goodfellowii F0264] Length = 435 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 68/400 (17%), Positives = 130/400 (32%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y++D++ + +D + A K F GM + S Sbjct: 30 ETPLYVMDQELIETTIDKMKKAFVSSRFDTHIAYAGKAFFTTGMAKIIEAKDLELDVVSG 89 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK 117 E+ F + + K E + + + I+ + ++ K + ++ +KK Sbjct: 90 GELYTAYKAGFPMDKVHMHGNNKSYEELEMAIDLEIKQIVIDNEDEIGKIEKICKEKNKK 149 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 LRI+P + + S+ G K +SE G H Sbjct: 150 QAVLLRIDPGIEAHTHHYIKTSGLTSKFGISLFQKDLLDIIKRINDSEYLEFRGFHTHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + F L+ I K + +++GGG K+ + + + Sbjct: 210 SQIFQSIFFIFALEEIFKYLDKLKKELGIVVHTVNMGGGFGVYYKEGDDPVPVEEVLKEI 269 Query: 223 EKYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 Y+ + +EPG +IV N T V I + + K V V+ + ++ Sbjct: 270 ITYTEAMEIKYKIGFKELCIEPGRSIVGNAGTTLYEVGGIKKTVGGKTYVFVNGGMADNI 329 Query: 270 PDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E V G+ C +GDI E + +GD ++ Sbjct: 330 RPALYQAEYEAGITNKLDKEATNEVTVAGKFCESGDILIEKTKIQEAHVGDILAITTTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +N P + A++ ++ D N Sbjct: 390 YCYTMSSNYNRFAKPAVVFVKDGKAKLAVKRETFEDLIRN 429 >gi|237507384|ref|ZP_04520099.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia pseudomallei MSHR346] gi|234999589|gb|EEP49013.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia pseudomallei MSHR346] Length = 1110 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 182/373 (48%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 730 LDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 789 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 790 EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 848 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 849 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 908 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 909 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 967 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 968 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1027 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1028 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1087 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1088 AAVQRFSYEDFLR 1100 >gi|237747395|ref|ZP_04577875.1| diaminopimelate decarboxylase [Oxalobacter formigenes HOxBLS] gi|229378746|gb|EEO28837.1| diaminopimelate decarboxylase [Oxalobacter formigenes HOxBLS] Length = 431 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 122/397 (30%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-----GVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 TP Y+ K L+ + K + ++K + + + L + G Sbjct: 30 GTPLYVYSKTALIEHFHQYADTCKRHETDDIHSLVCYSVKSNSNLAILNILGREGAGFDI 89 Query: 58 SSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL 114 S E++ ++ K E ++ D + ++L + A ++ Sbjct: 90 VSGGELLRVIAAGCDPRKVIFSGVGKTTEEISLALKHDILCFNVESFAELQRINRIASEM 149 Query: 115 HKKIGL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHN 165 KK + R+NP V ++ G ++ + +V G+ H Sbjct: 150 GKKARISFRVNPDVDPKTHPYISTGLKENKFGIPFEEALSCYEQASKMTHIDVTGIDCHI 209 Query: 166 NCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + L + + +++ I +GGGI T + + L Sbjct: 210 GSQLLDDSPLLEALDKLIGLYDQLAQRNIELQHIDIGGGIGITYDNEEPVAVPEYLSRLF 269 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVP 270 K + I EPG +I N L T V + + K+ IVD+++ + Sbjct: 270 RKIGEWKNANYPGKPLAIMFEPGRSISGNAGLLLTQVQYLKTNSDKHFAIVDAAMNDLMR 329 Query: 271 DYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + N T V G C +GD ++ D ++ Y Sbjct: 330 PSLYEAWHTVLPVVKRNGSALTYDVVGPVCESGDWLARQRKLS-IEADDYLAVMSAGAYG 388 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + + Y Sbjct: 389 MAMASNYNTRGRAAEVLVDNGQVHLIRQRERAEELYA 425 >gi|167907022|ref|ZP_02494227.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia pseudomallei NCTC 13177] Length = 416 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 182/373 (48%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 36 LDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 95 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 96 EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 154 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 155 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 214 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 215 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 273 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 274 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 333 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 334 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 393 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 394 AAVQRFSYEDFLR 406 >gi|227529334|ref|ZP_03959383.1| diaminopimelate decarboxylase [Lactobacillus vaginalis ATCC 49540] gi|227350762|gb|EEJ41053.1| diaminopimelate decarboxylase [Lactobacillus vaginalis ATCC 49540] Length = 443 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 65/398 (16%), Positives = 128/398 (32%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ + + + V + A K FAA M+ S Sbjct: 38 GTPLVVYDVSQIRQQIRSFRRVFDANHVDYAVSYASKAFAAIAMYQVAAAEGAHVDVVSA 97 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F E +++ K E + + TI+ + ++ ++ ++ Sbjct: 98 GELYTAIKADFPIERVSFHGNNKSREELEMAIDHHVGTIMIDNFHEIELLATVLEERNES 157 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G E + + + + GL H Sbjct: 158 VDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALQKVLANPRMKMRGLHAHIG 217 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214 + F +++ F + + I++GGG Sbjct: 218 SQIFELAGFEGVAKKLVEVAAHWRDEFGYEAQVINVGGGFGIRYVAADHPLKPEEFVDAI 277 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + +K+ + + I++EPG +IV TV + K V VD + ++ Sbjct: 278 IKAIKKETAEKGLSMPAIWIEPGRSIVGPAGYNLYTVGSRKDVPGLKPYVTVDGGMGDNI 337 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E T+ + + G+ C +GDI + + GD ++ D Sbjct: 338 RPALYQAEYETVLASNPQAPIKEHVRLAGKYCESGDILAQDQGLPETQPGDVLAMLDTGA 397 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N P + I S D Sbjct: 398 YGYSMASNYNRNPRPAVVFAEDGKAQLVIERESLADLV 435 >gi|197119232|ref|YP_002139659.1| ornithine/diaminopimelate/arginine decarboxylase-like protein TabA [Geobacter bemidjiensis Bem] gi|197088592|gb|ACH39863.1| ornithine/diaminopimelate/arginine decarboxylase-related protein TabA [Geobacter bemidjiensis Bem] Length = 421 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 56/391 (14%), Positives = 122/391 (31%), Gaps = 34/391 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +TP+++ D+ + + G + A+K + + + G SS+ Sbjct: 23 QTPFHIYDESGIRETGAQLVKAFSGIPGFREFFAVKALPNREILKLMKEMGFGFDCSSIP 82 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 EV+L E E + ++ A + + +S + K ++ Sbjct: 83 EVILARELGARPEDIMFTSNNTSQEEFDFATQDGGCIMNLDDISLIEKVPH-----FPEM 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCE---- 168 + N ++ G + +E+ + GL Sbjct: 138 ICFRYNPGPRRTGNVIIGNPEEAKYGVSHEQVVEAYRQAKERGATRFGLHTMVASNELDY 197 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---- 224 +L+ E+ + E++++GGG + R+ + Sbjct: 198 TYIVETARMVLEVAEEVEAALGIKFEFVNIGGGFGIPYRPEQKTLDLARMSAEVTELFDG 257 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 ++ +++E G + L TT ++ + + + VD+ + A + L Sbjct: 258 FRKRHGHAPAMFMESGRFMTGPHGALVTTAINSKDTYRRYIGVDACMSALMRPALYGAYH 317 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F +P++ GD + D + + Sbjct: 318 HIDVLGKDRDPKTEIYDVVGSLCENNDKFAVQRELQPIEDGDILVIHDSGAHGHAMGFQY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG P + DG ++ IR + DY+ Sbjct: 378 NGRLRPKELMLRADGRVELIRRAETVEDYFA 408 >gi|292655256|ref|YP_003535153.1| diaminopimelate decarboxylase [Haloferax volcanii DS2] gi|291370043|gb|ADE02270.1| diaminopimelate decarboxylase [Haloferax volcanii DS2] Length = 415 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 54/377 (14%), Positives = 115/377 (30%), Gaps = 20/377 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ D +++ N + A+K A + +T+ + +S E Sbjct: 27 GSPLYVTDLRRVRENCLRLREAFPE--AHVSYAVKAHAGRAVLETVREAGVDAECASAGE 84 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL---NKFKDKAQKLHKKI 118 V F GE Y + + + + ++ Sbjct: 85 VERALDAGFPGERVRYTAVNPPDADLDHVVSRWESNPEMTVTVGAADTIDRLRERGFDGR 144 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFHNNCENKSFL 173 + ++ G E ++ G+ H Sbjct: 145 LCLRANPGVGAGHHEKVTTGGHAKFGIPIDRVPDLAADVREEFDLVGVHAHAGSGISGDD 204 Query: 174 CFSAM-LKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQ 228 + L + + +E++ +GGG + +E + Q Sbjct: 205 LSAHRELVRRMGDLAREVGGLEFVDVGGGFGVPYREDEPPLDLAAVADATREALGEVDAQ 264 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---YPN 284 + +EPG +V + L + V + E + V+ +D+ + + + A P+ Sbjct: 265 LAVEPGRYVVADAGVLLSRVNTVKEVPETTVVGIDAGMTTLLRPAMYDAYHAISNLSRPD 324 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 P + +V G C D+F + + GD ++ + Y + +N P V Sbjct: 325 ADPVSTIVAGPVCETSDVFADGRDLPDPERGDCLALGNAGAYGYEMASTYNSRPRPPEVV 384 Query: 345 KNVDGTIKAIREFSYND 361 + DG A R + +D Sbjct: 385 LDADGPRLARRRETLHD 401 >gi|256390400|ref|YP_003111964.1| diaminopimelate decarboxylase [Catenulispora acidiphila DSM 44928] gi|256356626|gb|ACU70123.1| diaminopimelate decarboxylase [Catenulispora acidiphila DSM 44928] Length = 465 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 119/398 (29%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YLID+ + A + A K F + + + S E Sbjct: 64 GTPAYLIDEDDWRRRAREWVEAF-GADADVFYAGKSFLSVAIAKWAAEEGLHLDVCSGGE 122 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F E ++ K AV + II ++ ++ + A + + ++ Sbjct: 123 LAVALRAGFPAERLGFHGNNKSVAELERAVDAGVGRIIVDSHDEIERLAAIAADRGVRQR 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC----------KDKIESEIKNVNGLMFHNNC 167 + LR+ P V + G + ++ + GL H Sbjct: 183 VMLRVTPGVEAHTHEFIATAHEDQKFGFSLAGGAAAEAVARLLKHADHLELTGLHSHIGS 242 Query: 168 ENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + F + + + ++ + LGGG+ + + Sbjct: 243 QIFDTAGFEVAAHRLTEALAAIKRDHGIELPELDLGGGLGIAYTEGDDPAPVAETARRLK 302 Query: 224 K-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVP 270 + ++ +EPG AI V + + V VD + ++ Sbjct: 303 EIVARECDAAGLTRPRLSVEPGRAIAGPPGITLYEVGTVKPLPGLRTYVSVDGGMSDNIR 362 Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAG 325 L E + P + V G+ C +GDI + GD ++ Sbjct: 363 TALYDAEYTAALVSRSSTAVPVLSRVVGKHCESGDIVVRDAWLPGDTAPGDLLAIAATGA 422 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N + P + +R + +D Sbjct: 423 YCRSMASNYNHLLKPPVIAVKDGAARTIVRRETEDDLL 460 >gi|139437267|ref|ZP_01771427.1| Hypothetical protein COLAER_00406 [Collinsella aerofaciens ATCC 25986] gi|133776914|gb|EBA40734.1| Hypothetical protein COLAER_00406 [Collinsella aerofaciens ATCC 25986] Length = 769 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 61/399 (15%), Positives = 119/399 (29%), Gaps = 35/399 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+ + N+ N G K A+K + LN+Y G SS Sbjct: 29 PTPFHLYDEAGIRRNMQEVRDAFAWNPGFKEYFAVKANPNPALISILNEYGCGCDCSSYT 88 Query: 62 EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ G ++ + + + F+ +S + ++ A + K + Sbjct: 89 ELMIARSLGITGHDIMFSSNDTPAADFELADKLGAIVNFDDISHIEFYERVAGPIPKTVS 148 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N S+ G + ++++ G+ Sbjct: 149 CRFNPGGLFQLSNGIMDNPGDSKYGMTTEQLFDAFRMLKAKGAEDFGIHAFLASNTVTND 208 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + + +I+L GG+ + + E +I Sbjct: 209 YYPKLARILFELAVRLERETGAHVAFINLSGGVGIPYLPEQQANDIHAIGEGVHAAYDEI 268 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E G ++ L T + K+ + VD+S + + Sbjct: 269 LVPAGMGDVAICTEMGRFMMGPYGCLVTKAIHEKRIYKDYIGVDASAVDLIRPAMYGAYH 328 Query: 279 ATIYPNTG----------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 T + G C D F + +GD + D + Sbjct: 329 HVTVMGQPGGPDKSAAPVTNTYDITGNLCENNDKFAIDRELPHIDMGDLLVIHDTGAHGY 388 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +NG + DG IR DY++ L Sbjct: 389 SMGYNYNGRLRSAEVLLRPDGAADLIRRAERPGDYFSTL 427 >gi|167724092|ref|ZP_02407328.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei DM98] Length = 419 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 182/373 (48%), Gaps = 12/373 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L L + + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 39 LDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 98 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A +D ++ ++ NCD + N++SQ + D A G Sbjct: 99 EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 157 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 158 LRINPQYSVVADARYDPCRPHSKLGVPLDVIERVVASDPRALHGLQGIHFHTNCDSTDFS 217 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + ++++EK + + WI+LGGG Y + K E + V +++EP Sbjct: 218 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 276 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291 G AIV T+ +V+D+ ++ + V + H P+ YQ + + + + Sbjct: 277 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 336 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 337 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 396 Query: 352 KAIREFSYNDYYN 364 A++ FSY D+ Sbjct: 397 AAVQRFSYEDFLR 409 >gi|188993964|ref|YP_001928216.1| diaminopimelate decarboxylase [Porphyromonas gingivalis ATCC 33277] gi|188995136|ref|YP_001929388.1| putative diaminopimelate decarboxylase [Porphyromonas gingivalis ATCC 33277] gi|188593644|dbj|BAG32619.1| diaminopimelate decarboxylase [Porphyromonas gingivalis ATCC 33277] gi|188594816|dbj|BAG33791.1| putative diaminopimelate decarboxylase [Porphyromonas gingivalis ATCC 33277] Length = 382 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 72/381 (18%), Positives = 121/381 (31%), Gaps = 35/381 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP+Y D L L V + ALK + T+ G S + Sbjct: 1 MKTPFYFYDLTLLERTLSALARSAGRHDVAIHYALKANNHPRILQTIGAAGFGADCVSGW 60 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 E+ E F + K E + + +V +L + A + Sbjct: 61 EIEAAIEAGFPASDIFFAGVGKSDEEILLALEARIGAFVVESVPELLNIERLAGSKNDIA 120 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169 I LR+NP V ++ G +D + GL FH + Sbjct: 121 PILLRLNPEVDAHTHSHITTGLAENKFGLLPEDAFALMPHLLQSGSLVWRGLHFHIGSQI 180 Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKE 220 +S F + + + F + I +GGG+ + +R + Sbjct: 181 RSAKVFEELCEKTNRILASFRTAGYSPDIIDMGGGLGINYDEPEAEPIPDFATYIERYRR 240 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 E ++++EPG ++V +L T VL I E K IVD+ + V L Sbjct: 241 MIETGEARLHIEPGRSVVAQCGSLITQVLYIKEGKAKKFAIVDAGMTDLVRPALYEAHHQ 300 Query: 280 TIYPNTGPYT-------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 G +T V G C + D+F +K GD ++ Y Sbjct: 301 IRLVQPGEWTMRATSPSAALTEKYDVVGPICESSDVFERELLMPELKRGDYLAIRSAGAY 360 Query: 327 NINRKNWFNGINMPTIAVKNV 347 + +N +P + Sbjct: 361 GAVMASSYNMRPLPGSLFSDE 381 >gi|322369890|ref|ZP_08044452.1| diaminopimelate decarboxylase [Haladaptatus paucihalophilus DX253] gi|320550226|gb|EFW91878.1| diaminopimelate decarboxylase [Haladaptatus paucihalophilus DX253] Length = 415 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 61/380 (16%), Positives = 112/380 (29%), Gaps = 21/380 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ID +++ N + A K + + +TL +S E Sbjct: 31 DTPLYVIDLERVRENYARLAAAF--PDADVHFAAKANTSRAVLETLEAEGASIECASAGE 88 Query: 63 VMLG-HEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFN-TVSQLNKFKDKAQKLHKKI 118 F GE Y AV D TV + A++ + Sbjct: 89 TERAFAAGFEGERVHYTAVNPPGIDLDRAVELAADHPGLTVTVGAADTIDRLAERGYDGR 148 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCENKSFL 173 + ++ G ++ +V G+ H Sbjct: 149 LCLRVNPGVGAGHHEKVRTGADAKFGVPYDRAASLLESAADDFDVVGIHAHAGSGISGDD 208 Query: 174 --CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFSEKYSV 227 ++ + + +E++ +GGG ++ Sbjct: 209 LGNHRELVSRMGELARTIDPDLEFVDVGGGFGVPYHPDDPPLDLESVADATRDALGDLDA 268 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESAT--IYPN 284 + +EPG +V + L T V + E + V+ VD+ + A V L + + Sbjct: 269 TLVVEPGRYLVADAGVLLTRVNTVKEAPETTVVGVDAGMTALVRPALYDSYHHIRSVGAD 328 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 V G C + D FG GD ++ + Y + +N P + V Sbjct: 329 GQAVETTVAGPICESSDTFGTH-LLADPTRGDLLAVGNAGAYGYEMASQYNSRPRPAVVV 387 Query: 345 KNVDGTIKAIREFSYNDYYN 364 + D T A R ++ D Sbjct: 388 VDGDRTGVAHRRETHADVIA 407 >gi|293399853|ref|ZP_06643999.1| diaminopimelate decarboxylase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306253|gb|EFE47496.1| diaminopimelate decarboxylase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 429 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 67/395 (16%), Positives = 124/395 (31%), Gaps = 37/395 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D+ K+ L + ++ ++L A K F+ M + + QY S Sbjct: 22 QTPLYIYDENKITEKLSRFHELFQSDTFKTEVLYASKAFSCKAMVELVAQYGLSLDVVSG 81 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F E ++ K + + TII + + + ++ Sbjct: 82 GELYTAKQAGFPMERVYFHGNNKSYDEIMMALDYGVGTIIVDNAMECDMLVKAVKRSGRS 141 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVN--------GLMFHN 165 K LR+NP V S+ G K +I + I + G H Sbjct: 142 IKTMLRVNPGVEAHTHKYIVTAHLDSKFGISITKKKEIAAMIHTLTSVAEITFLGYHSHI 201 Query: 166 NCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221 + +++ ++ + I ++LGGG + Q + Sbjct: 202 GSQIFDKQAYVAEIEKLMQFTKEMQTEYDIHISALNLGGGFAALYTNADHPIPLQDVCHT 261 Query: 222 SEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHV 269 + I +EPG +IV + V + I D + ++ Sbjct: 262 ILDTCKKENAKQQLNIEKIMIEPGRSIVAEAGSTLYRVGYQKQTEHKKYIFVDGGMSDNI 321 Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E A T + G+ C +GDI E V D + Sbjct: 322 RPALYQAEYACDIANRMQEDKTETVTIAGKCCESGDILIENAKLPKVSQNDLLIIYTTGA 381 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 Y + + +N + P + I++ SY Sbjct: 382 YGYSMASNYNKLGRPAVVFVKDGHARVVIKKESYE 416 >gi|317010571|gb|ADU84318.1| diaminopimelate decarboxylase [Helicobacter pylori SouthAfrica7] Length = 405 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ + K + ALK + + L G SL E Sbjct: 12 KTPFYLYDFDKIKQAFLSYKEAFKGRKSLICYALKANSNLSILSLLASLESGADCVSLGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIEKIAQSLGIKAR 131 Query: 120 LRI--NPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + + NP++ ++ G + K+ +E S + FH + Sbjct: 132 ISVRINPNIDAKTHPYISTGLKENKFGVEEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI ++ D+ Q + + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVGYENEETIKLYDYAQGILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + +K GD+++ E V Y + + +N Sbjct: 312 TPSKSDKISPCDVVGPVCESSDTFLKEVNLPELKPGDKLAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 ++ S D + Sbjct: 372 LLELALEDHKIRVIRKKESLEDLWR 396 >gi|308375427|ref|ZP_07443849.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu007] gi|308346422|gb|EFP35273.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu007] Length = 470 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 123/406 (30%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + +G + A K F + +++ + E Sbjct: 62 GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 120 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + K AV + I+ ++++++ + A + + Sbjct: 121 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ + GL H + Sbjct: 181 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 240 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + G F + I + LGGG+ + L Sbjct: 241 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 300 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + ++ +EPG AI T V + + + Sbjct: 301 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 360 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L + + + P A + G+ C +GDI + ++ GD + Sbjct: 361 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 420 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + +D + Sbjct: 421 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 466 >gi|308373102|ref|ZP_07431007.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu005] gi|308338874|gb|EFP27725.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu005] Length = 425 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 123/406 (30%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + +G + A K F + +++ + E Sbjct: 17 GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 75 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + K AV + I+ ++++++ + A + + Sbjct: 76 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 135 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ + GL H + Sbjct: 136 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 195 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + G F + I + LGGG+ + L Sbjct: 196 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 255 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + ++ +EPG AI T V + + + Sbjct: 256 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 315 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L + + + P A + G+ C +GDI + ++ GD + Sbjct: 316 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 375 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + +D + Sbjct: 376 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 421 >gi|308231803|ref|ZP_07413799.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu001] gi|308370005|ref|ZP_07419962.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu002] gi|308370683|ref|ZP_07422337.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu003] gi|308371932|ref|ZP_07426700.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu004] gi|308374279|ref|ZP_07435413.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu006] gi|308377688|ref|ZP_07480041.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu009] gi|308378900|ref|ZP_07484233.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu010] gi|308380036|ref|ZP_07488456.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu011] gi|308216082|gb|EFO75481.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu001] gi|308325586|gb|EFP14437.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu002] gi|308331250|gb|EFP20101.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu003] gi|308335066|gb|EFP23917.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu004] gi|308342559|gb|EFP31410.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu006] gi|308354994|gb|EFP43845.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu009] gi|308358942|gb|EFP47793.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu010] gi|308362850|gb|EFP51701.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu011] Length = 491 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 123/406 (30%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + +G + A K F + +++ + E Sbjct: 83 GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 141 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + K AV + I+ ++++++ + A + + Sbjct: 142 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 201 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ + GL H + Sbjct: 202 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 261 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + G F + I + LGGG+ + L Sbjct: 262 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 321 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + ++ +EPG AI T V + + + Sbjct: 322 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 381 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L + + + P A + G+ C +GDI + ++ GD + Sbjct: 382 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 441 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + +D + Sbjct: 442 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 487 >gi|260186230|ref|ZP_05763704.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis CPHL_A] gi|289446888|ref|ZP_06436632.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis CPHL_A] gi|289419846|gb|EFD17047.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis CPHL_A] Length = 447 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 123/406 (30%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + +G + A K F + +++ + E Sbjct: 39 GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 97 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + K AV + I+ ++++++ + A + + Sbjct: 98 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ + GL H + Sbjct: 158 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 217 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + G F + I + LGGG+ + L Sbjct: 218 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 277 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + ++ +EPG AI T V + + + Sbjct: 278 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 337 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L + + + P A + G+ C +GDI + ++ GD + Sbjct: 338 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 397 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + +D + Sbjct: 398 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 443 >gi|157878196|pdb|1HKV|A Chain A, Mycobacterium Diaminopimelate Dicarboxylase (Lysa) gi|157878197|pdb|1HKV|B Chain B, Mycobacterium Diaminopimelate Dicarboxylase (Lysa) Length = 447 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 123/406 (30%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + +G + A K F + +++ + E Sbjct: 38 GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 96 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + K AV + I+ ++++++ + A + + Sbjct: 97 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 156 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ + GL H + Sbjct: 157 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 216 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + G F + I + LGGG+ + L Sbjct: 217 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 276 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + ++ +EPG AI T V + + + Sbjct: 277 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 336 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L + + + P A + G+ C +GDI + ++ GD + Sbjct: 337 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 396 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + +D + Sbjct: 397 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 442 >gi|15608433|ref|NP_215809.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis H37Rv] gi|15840743|ref|NP_335780.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis CDC1551] gi|31792486|ref|NP_854979.1| diaminopimelate decarboxylase LysA [Mycobacterium bovis AF2122/97] gi|121637222|ref|YP_977445.1| putative diaminopimelate decarboxylase lysA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661081|ref|YP_001282604.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis H37Ra] gi|148822511|ref|YP_001287265.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis F11] gi|167969618|ref|ZP_02551895.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis H37Ra] gi|215403133|ref|ZP_03415314.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis 02_1987] gi|215410930|ref|ZP_03419738.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis 94_M4241A] gi|215426613|ref|ZP_03424532.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis T92] gi|215430178|ref|ZP_03428097.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis EAS054] gi|215445470|ref|ZP_03432222.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis T85] gi|218752999|ref|ZP_03531795.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis GM 1503] gi|219557192|ref|ZP_03536268.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis T17] gi|224989697|ref|YP_002644384.1| putative diaminopimelate decarboxylase [Mycobacterium bovis BCG str. Tokyo 172] gi|253799661|ref|YP_003032662.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN 1435] gi|254231551|ref|ZP_04924878.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis C] gi|254364190|ref|ZP_04980236.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis str. Haarlem] gi|254550300|ref|ZP_05140747.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260200344|ref|ZP_05767835.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T46] gi|260204549|ref|ZP_05772040.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis K85] gi|289442732|ref|ZP_06432476.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis T46] gi|289554917|ref|ZP_06444127.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN 605] gi|289569303|ref|ZP_06449530.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T17] gi|289573956|ref|ZP_06454183.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis K85] gi|289745039|ref|ZP_06504417.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis 02_1987] gi|289749846|ref|ZP_06509224.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T92] gi|289753370|ref|ZP_06512748.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis EAS054] gi|289757393|ref|ZP_06516771.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis T85] gi|289761448|ref|ZP_06520826.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis GM 1503] gi|294994848|ref|ZP_06800539.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis 210] gi|297633843|ref|ZP_06951623.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis KZN 4207] gi|297730830|ref|ZP_06959948.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis KZN R506] gi|298524797|ref|ZP_07012206.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis 94_M4241A] gi|306802991|ref|ZP_07439659.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu008] gi|307083855|ref|ZP_07492968.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu012] gi|313658162|ref|ZP_07815042.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis KZN V2475] gi|61222668|sp|P0A5M4|DCDA_MYCTU RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|61222669|sp|P0A5M5|DCDA_MYCBO RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|1322417|emb|CAA97758.1| PROBABLE DIAMINOPIMELATE DECARBOXYLASE LYSA (DAP DECARBOXYLASE) [Mycobacterium tuberculosis H37Rv] gi|13880934|gb|AAK45594.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis CDC1551] gi|31618075|emb|CAD94186.1| PROBABLE DIAMINOPIMELATE DECARBOXYLASE LYSA (DAP DECARBOXYLASE) [Mycobacterium bovis AF2122/97] gi|121492869|emb|CAL71340.1| Probable diaminopimelate decarboxylase lysA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600610|gb|EAY59620.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis C] gi|134149704|gb|EBA41749.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis str. Haarlem] gi|148505233|gb|ABQ73042.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis H37Ra] gi|148721038|gb|ABR05663.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis F11] gi|224772810|dbj|BAH25616.1| putative diaminopimelate decarboxylase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321164|gb|ACT25767.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN 1435] gi|289415651|gb|EFD12891.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis T46] gi|289439549|gb|EFD22042.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN 605] gi|289538387|gb|EFD42965.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis K85] gi|289543057|gb|EFD46705.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T17] gi|289685567|gb|EFD53055.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis 02_1987] gi|289690433|gb|EFD57862.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T92] gi|289693957|gb|EFD61386.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis EAS054] gi|289708954|gb|EFD72970.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis GM 1503] gi|289712957|gb|EFD76969.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis T85] gi|298494591|gb|EFI29885.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis 94_M4241A] gi|308350365|gb|EFP39216.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu008] gi|308366490|gb|EFP55341.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu012] gi|323720250|gb|EGB29349.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis CDC1551A] gi|326902915|gb|EGE49848.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis W-148] gi|328459407|gb|AEB04830.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN 4207] Length = 447 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 123/406 (30%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + +G + A K F + +++ + E Sbjct: 39 GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 97 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + K AV + I+ ++++++ + A + + Sbjct: 98 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ + GL H + Sbjct: 158 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 217 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + G F + I + LGGG+ + L Sbjct: 218 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 277 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + ++ +EPG AI T V + + + Sbjct: 278 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 337 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L + + + P A + G+ C +GDI + ++ GD + Sbjct: 338 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 397 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + +D + Sbjct: 398 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 443 >gi|307717734|ref|YP_003873266.1| hypothetical protein STHERM_c00170 [Spirochaeta thermophila DSM 6192] gi|306531459|gb|ADN00993.1| hypothetical protein STHERM_c00170 [Spirochaeta thermophila DSM 6192] Length = 419 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 64/394 (16%), Positives = 117/394 (29%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP++L D++ + G K A+K + L + G SSL Sbjct: 20 PTPFHLYDERGIRETARRLYEAFDWVPGGFKNFFAVKALPNPYILKILKEEGMGADCSSL 79 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E++L GE + I + ++ + + A + Sbjct: 80 PELVLAEKVGLSGEEIMFTSNNTPYWEYQKAWELGARINLDDITHIPYLE--AHVGIPEF 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSF 172 K + S+ G + ++ + GL + Sbjct: 138 ICMRYNPGPLKKGNAIIGHPEESKYGFTREQIIEGYRLLKEKGAKRFGLHTMVVSNELNV 197 Query: 173 LCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 F + + + IE+I+LGGGI + + + +R+K ++ Sbjct: 198 DYFEDTARLLFSLVAEVKEEVGVDIEFINLGGGIGIPYRPDQEAVDLYELSRRIKAAYDE 257 Query: 225 -------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 Y QI +E G + L T + K + VD+ + + + Sbjct: 258 MIVRRGLYPAQIVMENGRMVTGPHGFLITRAIHRKHTYKRFIGVDACMANLMRPGMYGAY 317 Query: 278 SATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 V G C D F P++ GD I D + Sbjct: 318 HHITVLGKEDVPPSEVYDVVGSLCENIDKFAIDRALPPIEPGDIIVIHDTGAHGHAMGFN 377 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +NG + DG+ IR + +DY+ L Sbjct: 378 YNGKLRSAEILLREDGSAVCIRRAETVDDYFATL 411 >gi|295112265|emb|CBL29015.1| diaminopimelate decarboxylase [Synergistetes bacterium SGP1] Length = 428 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 60/401 (14%), Positives = 114/401 (28%), Gaps = 39/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + + G A K F M ++Q G SL Sbjct: 19 GTPLYVLDEAVIRARCAEVRRDFLSRWPGTDACYASKAFVTRAMARIVDQEGLGLDVVSL 78 Query: 61 YEVMLGH-EKFGGETH-AYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E + A + E+ A+ I+ +++ +L+ D A Sbjct: 79 GELRTALSAGFPPERIELHGNAKSEVELRTALEVGVGRIVVDSLMELDVLADLAEEMGPA 138 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK-DKIESEIKN--------VNGLMFHNN 166 L R S+ G + D + ++ + GL FH Sbjct: 139 GADPAARRAGGFRQHARLHRHGRVGSKFGLPLEGDLLFEAVRRGMARSGLDLLGLHFHVG 198 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + +L+ + ++ ++ GGG + Sbjct: 199 SQLFEPDAHLRSLVRVLEAAAELRARLGFELRELNFGGGYGARSNPSESHVPIALFTDAM 258 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD 271 +E G IV+ V + E + A P Sbjct: 259 MGALERECATRGLKRPVASIEAGRWIVSEAGITLYRVEVVKELPGLTYVAVDGGMADNPR 318 Query: 272 YLLY--------QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 LY E + V GR C +GD+ E ++ G+ ++ + Sbjct: 319 RPLYGAVYEAVSAERPDAVADRSGSRVSVVGRCCESGDVLIEDARLPALRRGEVLAVFNT 378 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + P + + +R + D Sbjct: 379 GAYTFSMASNYNRLCRPAVVLVRDGRADLIVRRETPEDLLA 419 >gi|319401317|gb|EFV89528.1| diaminopimelate decarboxylase [Staphylococcus epidermidis FRI909] Length = 421 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 56/394 (14%), Positives = 121/394 (30%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ N + + +G + A K F M +++ S Sbjct: 26 GTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCIQMVKLIDEENLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F + ++ K + + +T+ +++ A + Sbjct: 86 GELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVDTLEEIDLIDKYADS-NVD 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G K ++ + G+ FH + Sbjct: 145 VVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVNKVKATKHLQLKGIHFHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------R 217 + K + ++ +++GGG + + Sbjct: 205 IEGTEAMIKTAKIVLNWLASERIEVSLLNIGGGFGIKYVEGDESFPIEQGISEITEAIKE 264 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275 + + +I +EPG +IV V I + V + H+ L Sbjct: 265 TAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSVDGGMSDHIRTALYG 324 Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 + + + + G+ C +GDI V GD ++ Y+ + Sbjct: 325 AQYEALLVNRNEKANESVTIAGKLCESGDIIVRDAQLPSSVHRGDYLAVLSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P + + I+ S N Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|260889906|ref|ZP_05901169.1| diaminopimelate decarboxylase [Leptotrichia hofstadii F0254] gi|260860512|gb|EEX75012.1| diaminopimelate decarboxylase [Leptotrichia hofstadii F0254] Length = 464 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 69/402 (17%), Positives = 131/402 (32%), Gaps = 40/402 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTL-NQYMDGTTSSS 59 KTP Y++D++ + +D + ++ A K F + GM + + +D S Sbjct: 58 KTPLYVMDQELIETTIDKMKEAFQSNRFDTQIAYAGKAFLSMGMLKLVDAKELD-LDVVS 116 Query: 60 LYEVMLG-HEKFGGET-HAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ F + H + + A+ I+ + +++K + ++ K Sbjct: 117 GGELYTAYKAGFPMDRVHLHGNNKTVEELEMAIEFGIKEIVIDNEDEIDKIEKICREKGK 176 Query: 117 KIGLRINPSVS--YSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHN 165 K + + + S+ G K +SE G H Sbjct: 177 KQAVLVRIDPGIEAHTHHYIKTSGLTSKFGISLFQDNLFDIIKRLNDSEWIEFKGFHTHI 236 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221 + F L I K + +++GGG K+ + + Sbjct: 237 GSQIFQSAFFIFALDEIFKYLDKLKKELGIVVHTVNMGGGFGVYYKEGDDPKPIEEVLSE 296 Query: 222 SEKYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAH 268 Y+ + +EPG +IV N T V I E + K V +D + + Sbjct: 297 IITYTEAMEIKYQIGFKELCIEPGRSIVGNAGTTLYEVGGIKETVGGKTYVFIDGGMSDN 356 Query: 269 VPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDV 323 + L E N T + G+ C +GDI E +IGD ++ Sbjct: 357 IRTALYQAEYEAGVVNKINDTDVREITLAGKLCESGDIIIEKGKLPKATEIGDIVAVTTT 416 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +N + P + A++ + +D N Sbjct: 417 GAYCYTMSSNYNRMMRPAVVFVKDGKAKVAVKRETLDDLIRN 458 >gi|293375752|ref|ZP_06622023.1| diaminopimelate decarboxylase [Turicibacter sanguinis PC909] gi|292645621|gb|EFF63660.1| diaminopimelate decarboxylase [Turicibacter sanguinis PC909] Length = 430 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 60/399 (15%), Positives = 118/399 (29%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D+ L N K G ++ A K F M + + S Sbjct: 29 QTPLYVFDEALLRQNCKDYRKHFKVEERGNRVAYAGKAFLPLYMCHLIKEEGLYLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F + ++ K + + + + +L K Sbjct: 89 GELYTAYKADFPMDHVLFHGNNKTFDEINMGLEYGVGVFVVDNYYELETLNTMCHKRGKQ 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + + LRI P + + S+ G + + E N+ GL H Sbjct: 149 QNVYLRITPGIEAHTHDYIKTGQIDSKFGFTLSNGDLQRCLEVFHKYEHLNLIGLHAHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD--------- 213 + M+ ++ F +I + LGGG+ + Sbjct: 209 SQIFDVNPFLDEVEIMMTLVKDIKEQFGFEITDVDLGGGVGVYYTEKDAPKSIAQFCEAI 268 Query: 214 --FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 Q + E + ++ +EPG +IV N + TV + + V + ++ Sbjct: 269 LTKAQTVCETLQIDIPRLIIEPGRSIVANAGSTLYTVGSMKDIKDVRTYVSVDGGMTDNI 328 Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + G+ C +GDI ++ GD + Sbjct: 329 RPSLYQAVYECAIANWMESGNERHVTIAGKCCESGDILITDVDVNKIESGDILIITSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I + R +Y + + Sbjct: 389 YGYSMSSNYNKIPKAAVVAVKDGEAQLICRRQTYEELLS 427 >gi|254386377|ref|ZP_05001683.1| diaminopimelate decarboxylase [Streptomyces sp. Mg1] gi|194345228|gb|EDX26194.1| diaminopimelate decarboxylase [Streptomyces sp. Mg1] Length = 444 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 64/397 (16%), Positives = 126/397 (31%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ ++ T +L A K F + M +++ G S E Sbjct: 46 DTPVYVLDEGEVRARCRTYRDAF--PDADVLYAAKAFLSRAMVRWVDEEGLGLDVCSAGE 103 Query: 63 VMLGH-EKFGGETHA-YNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFK-DKAQKLHKKI 118 + L F E + A +I+A L I+ + S++ + +K+ Sbjct: 104 LELAVTAGFPPERMVLHGNAKSPHDIEAALRLGVGRIVIDGPSEIARLAAMVGTGGSQKV 163 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169 +R+ P ++ + G + + GL H + Sbjct: 164 MVRVVPGITVGGHEKIRTGTDGQKFGLSLTDGSAQHAIARVLGQPQLELTGLHCHIGSQI 223 Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221 + M+ + + + + +GGG + +RL+ Sbjct: 224 TDVKPYLAAVRRMVGLMARVRDAHGVVLPELDMGGGHGIAYRPGEPALDLTALARRLRTA 283 Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYL 273 + ++ +EPG A+ VL + + V VD + + L Sbjct: 284 LVESCAAAGLAVPRLTIEPGRAVAGPAGVALYRVLAVKRTGDRVFVAVDGGMSDNPRPAL 343 Query: 274 LYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 A P A V GR C AGDI V+ GD ++ Y + Sbjct: 344 YGVRYAPRLVGRRPAAQACVATVVGRHCEAGDILAADVELPGDVRPGDLLAVPVAGAYQL 403 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + +R + D+ + Sbjct: 404 SMASGYNLVGRPPVVAVDNGVARLLMRRETLADFRSR 440 >gi|294012853|ref|YP_003546313.1| diaminopimelate decarboxylase [Sphingobium japonicum UT26S] gi|292676183|dbj|BAI97701.1| diaminopimelate decarboxylase [Sphingobium japonicum UT26S] Length = 426 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 114/387 (29%), Gaps = 24/387 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP Y+ L ++ + A+K + TL + G S Sbjct: 25 VGTPVYIYSTATLTRHVAVFREGLSQIHDPLIAFAVKANPNAAVLATLAKLGLGADVVSA 84 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E++ E ++ K D A+ + + + A + + Sbjct: 85 GELLRAIAAGIPAERIVFSGVGKTADEMRIALEQGIYQFNLESEPEAEMLSEVALSMGRK 144 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168 + RINP V + ++ G + S +V G+ H + Sbjct: 145 APVAYRINPDVDAGTHAKISTGKSENKFGIPYDRALASYAAARDLPGLDVQGVAVHIGSQ 204 Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKE 220 + + + I LGGG+ D+ + Sbjct: 205 LTDLTPLEAAFIKVGALIERLRAEGHDIRTADLGGGLGVPYDPSQPLPPSPADYGAMVTR 264 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 ++ ++V++ EPG IV N L + V+ + + VIVD+++ + L Sbjct: 265 ITQGWNVRLMFEPGRLIVGNAGVLLSQVVRVKQGAQAPFVIVDAAMNDLLRPSLYDAWHD 324 Query: 280 TIYPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + A V G C GD F V GD ++F Y + +N Sbjct: 325 IRAVHPKGERAAANVVGPVCETGDTFAMHRDMDVVGAGDLVAFMTAGAYGATMASTYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D Sbjct: 385 ALTPEVLVSGDKWAVVRARPPIEALIE 411 >gi|57866856|ref|YP_188548.1| diaminopimelate decarboxylase [Staphylococcus epidermidis RP62A] gi|242242677|ref|ZP_04797122.1| diaminopimelate decarboxylase [Staphylococcus epidermidis W23144] gi|57637514|gb|AAW54302.1| diaminopimelate decarboxylase [Staphylococcus epidermidis RP62A] gi|242233813|gb|EES36125.1| diaminopimelate decarboxylase [Staphylococcus epidermidis W23144] Length = 421 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 56/394 (14%), Positives = 122/394 (30%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ N + + +G + A K F M +++ S Sbjct: 26 GTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCIQMVKLIDEENLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F + ++ K + + +T+ +++ A + Sbjct: 86 GELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVDTLEEIDLIDKYADS-NVD 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G K ++ + G+ FH + Sbjct: 145 VVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVNKVKATKHLQLKGIHFHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------R 217 + K + ++ +++GGG + + Sbjct: 205 IEGTEAMIKTAKIVLNWLASERIEVSLLNIGGGFGIKYVEGDESFPIEQGISEITEAIKE 264 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275 + + +I +EPG +IV V I + V + H+ L Sbjct: 265 TAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSVDGGMSDHIRTALYG 324 Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 + + + + G+ C +GDI V GD ++ Y+ + Sbjct: 325 AQYEALLVNRNEKANESVTIAGKLCESGDIIVRDAQLPSSVHRGDYLAVLSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + I+ S N Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|110667471|ref|YP_657282.1| diaminopimelate decarboxylase [Haloquadratum walsbyi DSM 16790] gi|109625218|emb|CAJ51638.1| diaminopimelate decarboxylase [Haloquadratum walsbyi DSM 16790] Length = 464 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 58/386 (15%), Positives = 119/386 (30%), Gaps = 31/386 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ID Q++ N L + A+K + + + +S E Sbjct: 38 ETPLYVIDAQRVRENCARLLDAF--PAATIRYAIKAHSGQAVLKVIRDAGIDVECASAGE 95 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQKLH 115 V F G Y + N TI + + +++ Sbjct: 96 VKAALAAGFNGNRIQYTAVNPPARDLDAIINWWQENKQLTITVGAADTVERLQER--GFD 153 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENK 170 ++ +R+NP+V ++ G + + ++ G+ H Sbjct: 154 GRLCIRVNPNVGAGHHEKV-TTGANAKFGIPYERVSELATQWATEFDLVGIHAHAGSGIS 212 Query: 171 -----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221 S + + + +E++ +GGG + +R ++ Sbjct: 213 GEDLSSHEELVRRMGTLARTITECAGSLEFVDVGGGFGVPYRANDPPLDIHTVAERTRDA 272 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESAT 280 + +EPG +V + L T V I + V+ VD+ + + + Sbjct: 273 LGTVDATLAIEPGRYVVADAGVLLTRVNTIKSARETTVVGVDAGMTTLLRPAMYDAYHEI 332 Query: 281 IYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + P + G C + DIF E GD I+ Y + +N Sbjct: 333 ENISASPTTDSMPVTIAGPICESSDIFAEGRSISAPTRGDIIAIGTAGAYGYEMASTYNA 392 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDY 362 P + + + A R + ++ Sbjct: 393 RPRPAEVIYDDNTAKVARRRETRDEL 418 >gi|301167407|emb|CBW26989.1| putative diaminopimelate decarboxylase [Bacteriovorax marinus SJ] Length = 409 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 75/384 (19%), Positives = 130/384 (33%), Gaps = 33/384 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSS 58 +KTP+YL + L N + ++ G+K + ALK + + TL G Sbjct: 30 LKTPFYLYSLEALQRNFENFKTEAQSNGLKNPLICYALKANSNIRLLKTLKSLGAGADIV 89 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQ 112 S E+ K + ++ K+ + ++ +L AQ Sbjct: 90 SGGELKQALKAKIPAQKIVFSGVGKNESEIELALTCHPEGIYSFNVESIEELEMISSIAQ 149 Query: 113 KLHKKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMF 163 +L+K LR+NP V+ + G +D ++ +K + GL Sbjct: 150 RLNKTARVALRLNPQVNVKTHKHISTGGKSHKFGILKRDIEQALLKKKLWKSVSLVGLSM 209 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-------VKDFCQ 216 H + L + + Q+E+I +GGG+ + + Sbjct: 210 HIGSQLTCLKATRKALIELCRLCNSCN-QLEFIDVGGGLGVPYNEDHPLSTLSEYMELIA 268 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL-DISENIKNLVIVDSSVEAHVPDYLLY 275 ++ + K ++I EPG I N L T V+ S +IVD + V L Sbjct: 269 KITQRELKEELRIVFEPGRYIAANCGVLITEVIRSKSSEENKFIIVDGGMNDFVRSSLYG 328 Query: 276 QESATIYPNTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + P T V G C D F +K DRI DV Y + + Sbjct: 329 AYHHVLPLKKRPSKLSTCHVVGPICETADSFASNRELPLLKAKDRICIADVGAYGSSMGS 388 Query: 333 WFNGINMPTIAVKNVDGTIKAIRE 356 +N + ++ G +R Sbjct: 389 TYNMREKTREYIIDLKGE---VRR 409 >gi|332187942|ref|ZP_08389675.1| diaminopimelate decarboxylase [Sphingomonas sp. S17] gi|332012103|gb|EGI54175.1| diaminopimelate decarboxylase [Sphingomonas sp. S17] Length = 420 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 62/375 (16%), Positives = 111/375 (29%), Gaps = 23/375 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP Y+ + + V L A+K + L G S+ Sbjct: 25 VGTPVYIYSASTFRRHAQVFREGLSALPRVHLAYAIKANPNLAVLRVLADEGYGADVVSV 84 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ E ++ K A+ + + + A + L Sbjct: 85 GEMRRALAAGMKAEDIVFSGVGKTRAELIAALEAGIGQFNLELEEEGAVLAELAHERGLV 144 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168 LR+NP V R ++ G + + ++ G+ H + Sbjct: 145 APATLRVNPDVDAGTHAKISTGRKENKFGVPIDQALGMFDRLAGLPGIDLKGVACHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEF 221 A K + + ++ + LGGG+ K V + + + Sbjct: 205 LGDLAPLEAAYKRVGELVAELRGAGHRVTRVDLGGGLGVPYKPGDVMPAPAAYGEMVARV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 ++ + V++ EPG I N L T V+ + VIVD+++ L Sbjct: 265 TKDWDVELMFEPGRVIAGNAGVLATEVVWVKPGVANPYVIVDAAMNDLARPALYDAYHDF 324 Query: 281 IYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + T M + G C GD F VK GD F Y + +N Sbjct: 325 VAVKPTGETMMANIAGPVCETGDTFAMNREIDVVKSGDLAVFRTAGAYGATMASTYNSRP 384 Query: 339 MPTIAVKNVDGTIKA 353 + + D Sbjct: 385 LVPEVMVEGDRFAVV 399 >gi|187921716|ref|YP_001890748.1| diaminopimelate decarboxylase [Burkholderia phytofirmans PsJN] gi|187720154|gb|ACD21377.1| diaminopimelate decarboxylase [Burkholderia phytofirmans PsJN] Length = 413 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 58/399 (14%), Positives = 114/399 (28%), Gaps = 44/399 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + A K + + + + SL E Sbjct: 16 GTPLWVYDADTIRRRIAELRSFDV-----IRYAQKACSNLHILKLMRDEGAMVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + ++ L + A + Sbjct: 71 IKRSLAAGFKPDGDPEGVVFTADLIDHATLATVIEHRITVNAGSLDMLEQIGRHAPE-GH 129 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LRINP + + S+ G D + + GL H Sbjct: 130 RVWLRINPGFGHGHSNKTNTGGEHSKHGIWLDDVPRAVELVRRYRLKLVGLHMHIGSGVD 189 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEF-------- 221 + S + + + + IE IS GGG+ + P D + + Sbjct: 190 -YGHLSRVCEAMVEAVKGLGHDIEAISAGGGLSVPYREGEPDIDVAHYFRLWDAARRQIE 248 Query: 222 -SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA 279 + V++ +EPG +V + L V ++ + D+ V Sbjct: 249 THVGHRVRLEIEPGRFLVAQSGVLVAEVHALNRRPAQQFALLDAGFNDLVRPSFYGSHHE 308 Query: 280 TIYPNTGPY-------TAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325 + V G C AGD+F ++GD I F D Sbjct: 309 MTVLRRDGALSEAPIDSFAVAGPLCEAGDVFTQAESGVITNRSIHTPEVGDFIVFHDAGA 368 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + ++ Sbjct: 369 YGASMSSNYNSRPLAPEVLLDHGKPRLIRRRQTIDELLA 407 >gi|33865470|ref|NP_897029.1| diaminopimelate decarboxylase [Synechococcus sp. WH 8102] gi|33632639|emb|CAE07451.1| diaminopimelate decarboxylase [Synechococcus sp. WH 8102] Length = 459 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 51/396 (12%), Positives = 110/396 (27%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ + K + A K ++ + G + S Sbjct: 52 GTPLYVLDEDTVRGTCRAYRDALKQHYPGPSLPIYASKANSSLLVSSIAASEGLGLDAVS 111 Query: 60 LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115 E++ + GE + D E+ +N TI+ + L + + A Sbjct: 112 AGELLTAFQGGMPGERMVLHGNNKNDEELLLAYNNDVTIVVDNQHDLERLAELVPAGGAP 171 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168 ++ LR P + S+ G + + + GL H + Sbjct: 172 ARLMLRFTPGIECHTHEYIQTGHLDSKFGFDPDLLESVLRQLVGKPWAKLTGLHAHIGSQ 231 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224 + + +E +++GGG+ ++ + Sbjct: 232 IFELEPHRDLAAVMADALKLARSLGHPVEDLNVGGGLGIRYVASDDPPTIEQWVKVVADA 291 Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 ++ EPG ++V V +D + + Sbjct: 292 VTAACRDRQLELPRLLCEPGRSLVATAGVTLYAVGSRKTIPGVRTYVAIDGGMSDNPRPI 351 Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + T + G+ C +GD+ + + GD ++ YN Sbjct: 352 TYQSLYTCCLADRPLAPAEETVNLVGKHCESGDVLLKDLPLPTTQSGDIVAVFATGAYNA 411 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P V + + +D Sbjct: 412 SMSSNYNRIPRPAAVVVQSGSSELFQKREQPDDLLR 447 >gi|85373232|ref|YP_457294.1| diaminopimelate decarboxylase [Erythrobacter litoralis HTCC2594] gi|84786315|gb|ABC62497.1| diaminopimelate decarboxylase [Erythrobacter litoralis HTCC2594] Length = 420 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 56/376 (14%), Positives = 108/376 (28%), Gaps = 24/376 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP Y+ + L + + A+K + L + G S Sbjct: 25 VGTPVYVYSRATLERHARVFTEGLAEVPDKLIAFAVKSNPNLAVLKVLQKAGFGADVVSG 84 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ ++ K + + + + + A + Sbjct: 85 GELRRALAAGMAPAKIVFSGVGKTRAELMLGLDEGIGQFNIESREEGRELAELAAARGEL 144 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCE 168 LRINP V + ++ G + ++ + ++ G+ H + Sbjct: 145 APACLRINPDVDAKTHEKISTGKAENKFGIPLVHAREVFAELVQLDGLHLRGIAVHIGSQ 204 Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221 + + I + LGGG+ + D+ + Sbjct: 205 LGDLEPLETAFGKVGKLVADLREAGHLITHVDLGGGLGVPYKAGEEFPSPADYGAMVARV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--NIKNLVIVDSSVEAHVPDYLLYQESA 279 + + V + EPG I N L T V+ + N VIVD+++ L Sbjct: 265 TRDWRVHLTFEPGRVIAGNAGILLTRVIRVKRGGNGPPFVIVDAAMNDLARPALYGAWHD 324 Query: 280 T--IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + P+ TA + G C GD F ++ GD F Y + +N Sbjct: 325 FDAVEPSGEHMTANIVGPICETGDTFARDRKCDALQSGDLAVFRTAGAYGATMASSYNSR 384 Query: 338 NMPTIAVKNVDGTIKA 353 + + D Sbjct: 385 GFVAEVLVDGDQFAVV 400 >gi|297559297|ref|YP_003678271.1| diaminopimelate decarboxylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843745|gb|ADH65765.1| diaminopimelate decarboxylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 461 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 115/398 (28%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D++ + + A K + +N+ S E Sbjct: 62 GTPLFVMDEEDFRGRARDYRTAF--SDADVYYAGKALLTKAVARWVNEEGLKLDVCSGGE 119 Query: 63 VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + E + K AV + +I +++ ++ + A +L K Sbjct: 120 LTVALAAGVPAERIGMHGNNKSAAELRRAVEAGVGRVIIDSLDEIERLGAIAAELGARPK 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + + + + GL H + Sbjct: 180 VLIRVTTGVEAHTHEFVATAHDDQKFGFAMSTGAAAEAVRRVLAAPHLELVGLHSHIGSQ 239 Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F + + + + + LGGG+ + + Sbjct: 240 IFDTSGFEVAARRVTRFLTGVHEELGVTLAELDLGGGLGIAYTSGDDPLDPKTIAGSLTS 299 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + +EPG AI V + + V + ++ Sbjct: 300 IVRRECEEAGLPVPRIAVEPGRAIAGPAGITVYEVGTVKDVEGIRTYVSVDGGMSDNIRT 359 Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + + P + + G+ C +GDI + ++ GD ++ Y Sbjct: 360 ALYGSEYTSQLVSRESDAEPMLSRLVGKHCESGDIIVHDLYLPADLRPGDLVAVAATGAY 419 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + + +R + D Sbjct: 420 CYSMASNYNHLPRPAMVAVRGGSSRVIVRRENEEDLLR 457 >gi|166031743|ref|ZP_02234572.1| hypothetical protein DORFOR_01443 [Dorea formicigenerans ATCC 27755] gi|166028196|gb|EDR46953.1| hypothetical protein DORFOR_01443 [Dorea formicigenerans ATCC 27755] Length = 423 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 61/391 (15%), Positives = 125/391 (31%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N+ N G K A+K + D L +Y G SS Sbjct: 20 PTPFHLYDEKGIRKNMQALKEAFAWNPGYKEYFAVKATPNPFLIDILREYGCGCDCSSYT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L GE ++ E + I + ++ ++ ++ ++ + I Sbjct: 80 ELLLSDAMGVKGEDIMFSSNDTPREEYELAHKLGAIINLDDITHIDFLEETIGEIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N ++ G + ++S+ G+ Sbjct: 140 CRYNPGGLFKISNDIMDNPGDAKFGMTTEQLFEAFKILKSKGAKEFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + K I++I+L GGI + + + + + ++ Sbjct: 200 YYPMLAKVLFEVAVKLQKEVGIHIKFINLSGGIGIPYTPDQEPNDIRAIGDGVREVYNEV 259 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 Y E G ++ L T + K + VD+ + + Sbjct: 260 LVPAGMGDVALYTELGRFMLGPYGCLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + +GD + D + + + Sbjct: 320 HITVMGKEDVPCDHKYDVTGSLCENNDKFAIDRMLPKIDMGDVLMIHDTGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+ + IR + DY+ Sbjct: 380 NGKLKSAEVLLKEDGSTQLIRRAETPADYFA 410 >gi|294673237|ref|YP_003573853.1| diaminopimelate decarboxylase [Prevotella ruminicola 23] gi|294472253|gb|ADE81642.1| diaminopimelate decarboxylase [Prevotella ruminicola 23] Length = 386 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 76/372 (20%), Positives = 131/372 (35%), Gaps = 26/372 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I+TP+Y D L L T K+ G + A+K A + + + G S Sbjct: 14 IETPFYYYDTVLLRQTLQTINSEASKHEGFVVHYAVKANANPRILRIIREAGLGADCVSG 73 Query: 61 YEVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKK 117 EV F E Y K + + D FN ++ +L + A + K Sbjct: 74 GEVEASIKAGFPKEKIVYAGVGKSDWEIKLGLDNDIFCFNVESIPELEVINELAAQKGKV 133 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168 R+NP+V ++ G ++ + E GL FH + Sbjct: 134 ARVAFRLNPNVGAHTHANITTGLAENKFGIAMGDMVKVIREAEKMENVKFVGLHFHIGSQ 193 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFS 222 F + +++E ++E I++GGG+ P+ DF ++ Sbjct: 194 ILDMGDFEALCNRVNELQQELISHRIRVEHINVGGGLGIDYAHPNRVPIPDFKAYFDTYA 253 Query: 223 EKYS----VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--Y 275 +K ++ E G A+V +L T L I E +K IVD+ + L Y Sbjct: 254 KKLKLQPGQTLHFELGRAVVAQCGSLITRTLYIKEGAVKKFAIVDAGFTDLIRPALYQAY 313 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + I + P V G C + D+F + K GD ++ Y + +N Sbjct: 314 HKIENITSDEAPEAYDVVGPICESTDVFAKQIDLNKAKRGDLLAIRSAGAYGEIMASQYN 373 Query: 336 GINMPTIAVKNV 347 +P + + Sbjct: 374 CRRLPKGYMSDE 385 >gi|319948887|ref|ZP_08022999.1| diaminopimelate decarboxylase [Dietzia cinnamea P4] gi|319437446|gb|EFV92454.1| diaminopimelate decarboxylase [Dietzia cinnamea P4] Length = 472 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 56/404 (13%), Positives = 121/404 (29%), Gaps = 45/404 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + A ++ A K F + + +S E Sbjct: 63 GTPLFVIDEDDFRSRCREMADAFGGAE-RVHYASKAFLTTETARWVAEEGLSLDVASGGE 121 Query: 63 VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + + F E + K D AV S ++ + +S++ A++ + + Sbjct: 122 LAIALRAGFPPERITVHGNNKSADELRYAVRSGVAHVVIDAMSEIELLDRIAREEGVVQD 181 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + + + GL H + Sbjct: 182 VFIRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAMEAVRAVFAASHIRLTGLHSHIGSQ 241 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ--------IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + + + ++ + LGGG+ + RL Sbjct: 242 IFDIDGFELAARRVIGLLRDIVDEFGTERTAQLDHLDLGGGLGISYVPSDDPPPVARLAA 301 Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 + + +EPG AI T V + + + + VD Sbjct: 302 SLREIVEGFARDAGLTPPTLVVEPGRAIAGPGTVTVYEVGVVKDVDLAGGEQRRYISVDG 361 Query: 264 SVEAHVP----DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ D + P + + G+ C +GD+ + GD + Sbjct: 362 GMSDNIRTALYDAVYDARLVGRASGAEPVVSRLVGKHCESGDVVVRDLWMPEDAGPGDLV 421 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + Y + + +N I P + +R + +D Sbjct: 422 AVAATGAYCYSMSSRYNLIGRPAVVAVRDGRARLMLRRETLDDL 465 >gi|315187350|gb|EFU21106.1| diaminopimelate decarboxylase [Spirochaeta thermophila DSM 6578] Length = 419 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 62/394 (15%), Positives = 118/394 (29%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP++L D++ + G K A+K + L + G SSL Sbjct: 20 PTPFHLYDERGIRETARRLYEAFDWVPGGFKNFFAVKALPNPYILKILKEEGMGADCSSL 79 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E++L GE + I + ++ ++ + A + Sbjct: 80 PELVLAEKVGLSGEEIMFTSNNTPYWEYQKAWDLGARINLDDITHISYLE--AHVGIPEF 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSF 172 K + S+ G + ++ + GL + Sbjct: 138 ICMRYNPGPLKKGNAIIGHPEESKYGFTREQIIEGYRLLKEKGAKRFGLHTMVVSNELNV 197 Query: 173 LCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 F + + + IE+I++GGGI + + + +R+K ++ Sbjct: 198 DYFEDTARLLFSLVAEVKEEVGVDIEFINMGGGIGIPYRPDQEAVDLYELSRRIKAAYDE 257 Query: 225 -------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 Y +I +E G + L T + K + VD+ + + + Sbjct: 258 MIVRRGLYPARIVMENGRMVTGPHGFLITRAIHRKHTYKRFIGVDACMANLMRPGMYGAY 317 Query: 278 SATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 V G C D F P++ GD I D + Sbjct: 318 HHITVLGKEDVPPSDVYDVVGSLCENIDKFAIDRALPPIEPGDIIVIHDTGAHGHAMGFN 377 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +NG + DG+ IR + +DY+ L Sbjct: 378 YNGKLRSAEILLREDGSAVCIRRAETVDDYFATL 411 >gi|291302993|ref|YP_003514271.1| diaminopimelate decarboxylase [Stackebrandtia nassauensis DSM 44728] gi|290572213|gb|ADD45178.1| diaminopimelate decarboxylase [Stackebrandtia nassauensis DSM 44728] Length = 468 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 63/402 (15%), Positives = 123/402 (30%), Gaps = 40/402 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 T Y++D+ + L + A K F + + + + Sbjct: 63 GTAAYVVDEADFRSRLRDFRGSFSANFPDGAVYYAGKSFLCKAVARWVAEEGVNLDICTG 122 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F GE A++ K A TI+ ++ ++ + A++ + Sbjct: 123 GELATAVAAGFPGERLAFHGNNKSEAELAAALDAGVGTIVLDSRIEVERLTRLAKQRGVR 182 Query: 118 IGLRINP--SVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168 G+ + V + G + +++ ++ GL H + Sbjct: 183 PGVMVRTKVGVEAHTHEYIATAHEDQKFGLSLEAAVKAAKHILAADVLHLKGLHSHIGSQ 242 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F ++ E+ + + LGGG ++L + K Sbjct: 243 IFETTAFEVAARRVIGAHEQIQRETGKTLPELGLGGGFGIAYTTQDDPQSPRQLADGLRK 302 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267 +EPG AI TT V + +++ V VD + Sbjct: 303 IVDHECDNLGIDIPSITVEPGRAISGPTTFTLYEVGTVKSVDLGAGRVRSYVSVDGGMSD 362 Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 ++ + A+ + P V G+ C AGDI F +K GD I+ Sbjct: 363 NIRTAMYGATYSVTLASRLSDAPPILGRVVGKHCEAGDIIVRDEFLPGDIKPGDLIAVPG 422 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + P + +R S +D N Sbjct: 423 TGAYCRSMASNYNHVPRPPVVAVADGTARLIVRGESVDDLLN 464 >gi|296284457|ref|ZP_06862455.1| diaminopimelate decarboxylase [Citromicrobium bathyomarinum JL354] Length = 419 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 58/375 (15%), Positives = 106/375 (28%), Gaps = 23/375 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP Y+ + L + + +L A+K + L + G S Sbjct: 25 VGTPVYVYSRATLERHARVFREGLGELDNPLILFAVKANPNLAVLRVLQREGFGADVVSG 84 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLH 115 E+ + ++ K + + + + + + A + Sbjct: 85 GELRRALAAGMTPDKIVFSGVGKTRAELELGLDTGIAQFNIESREEGRELAELAAARGEK 144 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168 + LRINP V + ++ G E+ + + GL H + Sbjct: 145 ARCALRINPDVDAGTHEKISTGKADNKFGVPLHHAAEAFAELGALPGLALEGLAIHIGSQ 204 Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221 I + I + LGGG+ D+ + Sbjct: 205 LADLAPLETAFGKIGTLLGQLREAGHTITRVDLGGGLGVPYRTGESFPSPADYGAMVARV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQES-- 278 + + VQ+ EPG I N L T V+ + VIVD+++ L Sbjct: 265 TRDWGVQLVFEPGRVIAGNAGVLLTRVVRVKRGLNNPFVIVDAAMNDLARPALYGAWHDF 324 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + TA + G C GD F + GD F Y + +N Sbjct: 325 EPVAQTEERMTANIVGPICETGDTFATNRDCPALVAGDLAVFRTAGAYGATMASSYNSRG 384 Query: 339 MPTIAVKNVDGTIKA 353 + + Sbjct: 385 FVPEVLVSGSDYAVV 399 >gi|251810828|ref|ZP_04825301.1| diaminopimelate decarboxylase [Staphylococcus epidermidis BCM-HMP0060] gi|282876164|ref|ZP_06285031.1| diaminopimelate decarboxylase [Staphylococcus epidermidis SK135] gi|251805663|gb|EES58320.1| diaminopimelate decarboxylase [Staphylococcus epidermidis BCM-HMP0060] gi|281295189|gb|EFA87716.1| diaminopimelate decarboxylase [Staphylococcus epidermidis SK135] gi|329732907|gb|EGG69252.1| diaminopimelate decarboxylase [Staphylococcus epidermidis VCU028] Length = 421 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 57/394 (14%), Positives = 121/394 (30%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ N + + +G + A K F M +++ S Sbjct: 26 GTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCIQMVKLIDEENLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F + ++ K S + +T+ +++ A + Sbjct: 86 GELYTALEAGFDSKRIHFHGNNKTKREIQYALDSQIGYFVVDTLEEIDLIDKYADS-NVD 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G K ++ + G+ FH + Sbjct: 145 VVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVNKVKATKHLQLKGIHFHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------R 217 + K + ++ +++GGG + + Sbjct: 205 IEGTEAMIKTAKIVLNWLASERIEVSLLNIGGGFGIKYVEGDESFPIEQGISEITEAIKE 264 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275 + + +I +EPG +IV V I + V + H+ L Sbjct: 265 TAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSVDGGMSDHIRTALYG 324 Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 + + + + G+ C +GDI V GD ++ Y+ + Sbjct: 325 AQYEALLVNRNEKANESVTIAGKLCESGDIIVRDAQLPSSVHRGDYLAVLSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P + + I+ S N Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|160943971|ref|ZP_02091201.1| hypothetical protein FAEPRAM212_01472 [Faecalibacterium prausnitzii M21/2] gi|158444647|gb|EDP21651.1| hypothetical protein FAEPRAM212_01472 [Faecalibacterium prausnitzii M21/2] gi|295104795|emb|CBL02339.1| Diaminopimelate decarboxylase [Faecalibacterium prausnitzii SL3/3] Length = 428 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 63/399 (15%), Positives = 119/399 (29%), Gaps = 35/399 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+++ D++ + N+ N G K A+K + L + G SSL Sbjct: 19 VPTPFHVYDEKGIRENVRRINKAFSWNKGFKEYFAVKALPNPVILQILKEEGCGVDCSSL 78 Query: 61 YEVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--- 115 E+ML F G ++ ++ I + + + + A Sbjct: 79 TELMLSEACGFTGHEIMFSSNQTPVEDMQKAYELGAYINLDDATMVEFLERVAGVPQEIF 138 Query: 116 --KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNC 167 G S F + D ++ G + I+S K + G+ Sbjct: 139 CRYNPGGTFQLGESEEGFQVMDKPG-DAKYGMTEQQMIDSYKKLMQKGAKQFGIHAFLAS 197 Query: 168 EN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + + + I +I+L GG+ + ++ + E Sbjct: 198 NTISDAYYPELAGILFQLAVRVQQATGAHISYINLSGGVGIPYRPEQTENDIMAIGEGVR 257 Query: 224 KYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272 K +I + E G L +TV+ K + +D+ + Sbjct: 258 KKFEEILVPAGMGDVAIFSEMGRFTTGPYGALVSTVIHEKHIYKEYIGLDACAANLMRPA 317 Query: 273 LLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + + V G C D F + IGD + D + Sbjct: 318 MYGAYHHITVLGKENEPCDHKYDVVGGLCENNDKFAVDRMLPKIDIGDILYIHDTGAHGS 377 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +NG + DG+ + IR + DY+ L Sbjct: 378 AMGYNYNGKLHCAEVLLCEDGSHRLIRRAQTPRDYFATL 416 >gi|45358763|ref|NP_988320.1| diaminopimelate decarboxylase [Methanococcus maripaludis S2] gi|45047629|emb|CAF30756.1| Diaminopimelate decarboxylase [Methanococcus maripaludis S2] Length = 436 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 65/398 (16%), Positives = 133/398 (33%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++ + + + N + K K + A K + L++ G Sbjct: 31 GTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYKANTNLAVTRLLSKLGCGAD 90 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113 S E+ + E +N K E + + +++S+L + A++ Sbjct: 91 IVSAGELYIAKLSDVPSEKIVFNGNCKLKEEIKMGIEAEIRAFNVDSISELVLINETAKE 150 Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLM 162 + K + R+NP+V ++ G E K + E + G+ Sbjct: 151 MGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESGIALETIKMAEKMENVKIVGIH 210 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216 H + F+ + + + + +I ++LGGG+ + Sbjct: 211 CHIGSQLTYISPFVEEARKIMDFVVLLKNEGIKIRDVNLGGGLGIPYDKNTKIPVQKDLS 270 Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHV 269 + + + LEPG ++V L TV + E V++D+ + + Sbjct: 271 KAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVKETPVAKWVMIDAGMNDMM 330 Query: 270 PDYLL--YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + Y E V G C + D+FG+ +++ D ++ DV Y Sbjct: 331 RPAIYESYHEITPCTIRAEKEVVSVAGGLCESSDVFGKDREISKMEVKDTVAILDVGAYG 390 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 I+ N +N P + + N + D + Sbjct: 391 ISMANNYNSRGKPAMILTNEKEVSLIRARETLADLISK 428 >gi|159905856|ref|YP_001549518.1| diaminopimelate decarboxylase [Methanococcus maripaludis C6] gi|159887349|gb|ABX02286.1| diaminopimelate decarboxylase [Methanococcus maripaludis C6] Length = 436 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 131/400 (32%), Gaps = 35/400 (8%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDG 54 + TP Y++ + + + N + K K + A K + L++ G Sbjct: 29 LYGTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYKANTNLAVTKLLSKLGCG 88 Query: 55 TTSSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA 111 S E+ + E +N K + + + ++ S L + A Sbjct: 89 ADIVSAGELYIAKLSDVPSEKIVFNGNCKLKDEIKMGIEAEIRAFNVDSTSDLILINETA 148 Query: 112 QKLHK--KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNG 160 +++ K + R+NP+V ++ G E K + E + G Sbjct: 149 KEMGKVANVAFRVNPNVDPKTHPKISTGMKKNKFGLDIESGIALETIKMAEKMENVKIVG 208 Query: 161 LMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ- 216 + H + F+ + + + + +I ++LGGG+ + Sbjct: 209 IHCHIGSQLTDISPFVEEAKKIMDFVVLLKNEGIEIRDVNLGGGLGIPYDKNTKIPVQKD 268 Query: 217 --------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEA 267 + + + LEPG ++V L TV + + +++D+ + Sbjct: 269 LSKAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVKDTPVAKWIMIDAGMND 328 Query: 268 HVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + + + V G C + D+FG+ +++ D ++ DV Sbjct: 329 MMRPAIYEAYHEIVPCTVRAEKEVVSVAGGLCESSDVFGKDRELTKMEVKDTVAILDVGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y I+ N +N P + + N + D + Sbjct: 389 YGISMANNYNSRGKPAMILTNEKEVSLIRARETLADLISK 428 >gi|293606250|ref|ZP_06688613.1| diaminopimelate decarboxylase [Achromobacter piechaudii ATCC 43553] gi|292815397|gb|EFF74515.1| diaminopimelate decarboxylase [Achromobacter piechaudii ATCC 43553] Length = 410 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 52/400 (13%), Positives = 115/400 (28%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + A K + + + + + SL E Sbjct: 16 GTPLWVYDAAVIRERIAQLRRFD-----TIRYAQKACSNLHILRLMREEGAVVDAVSLGE 70 Query: 63 VMLGHE-KFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + F E + D + + ++ L++ + Sbjct: 71 IERSLAAGFDPKGEPEGMVFTADLIDHATLDTVLRHGITVNAGSLDMLDRVGQAS--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LRINP + + P S+ G D + + G+ H Sbjct: 129 RVWLRINPGFGHGHSNKTNTGGPQSKHGIWIDDVAKAVAIVRRHGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224 + S++ + IE IS GGG+ + ++ ++ Sbjct: 189 -YGHLSSVCDAMVDVVRSLDHDIEAISAGGGLSIPYRDGEPRIDCDHYFEQWDAARKRIE 247 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 + +++ +EPG ++ L T V I+ + VD+ + + Sbjct: 248 QFLSHPIRLEIEPGRFLIAEAGVLVTEVHAINHRPERDFALVDAGFNDLMRPAMYGSFHR 307 Query: 280 TIYPNT--------GPYTAMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFEDVA 324 V G C +GD+F + +IGD + + Sbjct: 308 ISVHAPDGSDPSGVEQTRIAVAGPLCESGDVFTQEEGGVMSDQLLPQPRIGDFMVLHNAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGSSMSSNYNTRPLAPEVLLDQGQARLIRRRQTVAELLA 407 >gi|271966878|ref|YP_003341074.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021] gi|270510053|gb|ACZ88331.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021] Length = 451 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 52/392 (13%), Positives = 109/392 (27%), Gaps = 33/392 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL+D+++ ++ K F + L+ + E Sbjct: 60 GTPAYLLDEEEFQARCAEWRDAL--PDGEVHYGGKAFLCPEVVRWLDAAGLCLDVCTGGE 117 Query: 63 VMLGHEK-FGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + ++ K AV ++ ++ +++ + A + + Sbjct: 118 LAVAVAGGMDPARVVFHGNNKSFAELRRAVTWGVGCVVVDSFAEIERLALLAGEAGVRQR 177 Query: 120 --LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 +R+ P V S+ G E + + + + GL H + Sbjct: 178 VMIRVTPGVEAHTHEFIATGGDDSKFGFSLNAGLAAEAVRRVLAAASLELTGLHSHIGSQ 237 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLK 219 F M + I + LGGG+ + L+ Sbjct: 238 ITDLGGFTLAARRMAAFLLACEREHGVTIPKLDLGGGLGIVYRPGDPVPPRPAEVVAALR 297 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQE 277 E + EPG +I T V + E V + + + Sbjct: 298 EAVPAHLRLAV-EPGRSIAGPTAVALYEVGTVKEIPGVNTYVSVDGGMSDNPRPAMYGAA 356 Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKN 332 + + V G+ C +GD+ V+ GD ++ Y + + Sbjct: 357 YTALLASRSSDAPLREVTVVGKHCESGDVLVRDLPLPADVRPGDLLAIPASGAYQRSMAS 416 Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 +N + P + +R + D Sbjct: 417 NYNHVTRPPVVAVRDGSARVVVRRETEEDLLR 448 >gi|148555770|ref|YP_001263352.1| diaminopimelate decarboxylase [Sphingomonas wittichii RW1] gi|148500960|gb|ABQ69214.1| diaminopimelate decarboxylase [Sphingomonas wittichii RW1] Length = 423 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 116/391 (29%), Gaps = 28/391 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKN-----AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 + TP Y+ + ++ G + A+K + TL + G Sbjct: 25 VGTPVYVYSTATIERHVAVFKAALAAVESGPEGPLIAFAVKANPNRAVLATLARAGLGAD 84 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKA-- 111 S E++ + ++ K + + + + A Sbjct: 85 VVSGGELLRARAAGIPADKIVFSGVGKTEAEMRLGLEQGIFQFNIESEPEAEMLSEVAAA 144 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFH 164 + RINP+V + G I + + +V G+ H Sbjct: 145 TGRRAPVAFRINPNVIAGTHAKISTGGSEDKFGVAYDRAIAAYARAAELPGLDVRGVAVH 204 Query: 165 NNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQ 216 + A + I E +I LGGG+ + Sbjct: 205 IGSQLTDLGPSRAAFEKIGALIAELRAAGHRIVTADLGGGLGVPYDPAKPVPPLPDAYGA 264 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLY 275 ++E + ++ ++ EPG IV N L + V+ + VIVD+++ + L Sbjct: 265 MVREVTAGWNTRLVFEPGRVIVGNAGVLLSRVIRVKPGVTDPFVIVDAAMNDLMRPSLYD 324 Query: 276 QESAT--IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + PN TA + G C +GD F + V GD ++F Y N Sbjct: 325 AWHDIRAVTPNGAAMTANIVGPICESGDSFAKKRAMDAVGPGDLVTFMTAGAYGATMANT 384 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 +N + + N D Sbjct: 385 YNSRALTPEVLVNGDQWAVVRERQPIEALIA 415 >gi|260437146|ref|ZP_05790962.1| protein TabA [Butyrivibrio crossotus DSM 2876] gi|292810458|gb|EFF69663.1| protein TabA [Butyrivibrio crossotus DSM 2876] Length = 422 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 117/390 (30%), Gaps = 28/390 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N N G + A+K + + L +Y GT SS Sbjct: 20 PTPFHIYDEKGIRENARKVKEAFAWNPGFREYFAVKATPNPFLINILREYGCGTDCSSKT 79 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDK--------A 111 E+ML GE ++ E I + + ++ Sbjct: 80 ELMLSKAIGCKGEEIMFSSNDTPPEEFVYANKLGAIINLDDFTHIDVIDKLIGIPETISC 139 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-GLMFHNNCENK 170 + + N + + G K ++ ++ L + + Sbjct: 140 RFNPGGLFSIANSIMDNPGDAKYGFTKEQLIEGFKILKAKGAKNFGIHSFLASNTVTNDY 199 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-- 228 + + + I++I+L GG+ K + + E K + Sbjct: 200 YPSLAKILFELAVEIKNKTGCHIKFINLSGGVGIPYKPDGTPNDILAIGEGVHKVYDEVL 259 Query: 229 ---------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 IY E G ++ L T V ++ K + D+ + + Sbjct: 260 VPNGMGDVAIYTEMGRFMMGPYGGLVTRVGNMKHTYKEYIGTDACAVNLMRPAMYGAYHH 319 Query: 280 TIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F ++IGD + D + + +N Sbjct: 320 ITVLGKENEPCDHKYDVTGSLCENNDKFAIDRMLPKIEIGDYLFIHDTGAHGFSMGYNYN 379 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 G + +G ++ IR + DY+ Sbjct: 380 GKLRSAELLLKENGEVQMIRRAETPEDYFR 409 >gi|322378891|ref|ZP_08053308.1| carboxynorspermidine decarboxylase (NspC) [Helicobacter suis HS1] gi|322380383|ref|ZP_08054589.1| carboxynorspermidine decarboxylase [Helicobacter suis HS5] gi|321147173|gb|EFX41867.1| carboxynorspermidine decarboxylase [Helicobacter suis HS5] gi|321148701|gb|EFX43184.1| carboxynorspermidine decarboxylase (NspC) [Helicobacter suis HS1] Length = 408 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 128/396 (32%), Positives = 209/396 (52%), Gaps = 34/396 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+++ KL NL ++K AGVK++LALK FA W F+ L + G +S +Y Sbjct: 14 IPSPCYVLELAKLQRNLAILERVQKEAGVKIVLALKGFAFWRSFEWLRVSLHGCCASGVY 73 Query: 62 EVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E +L +E+FG E ++ +K+ +I +L IIFN+ +Q + +KD +K Sbjct: 74 EALLAYEEFGSRESGKEICVFSPGFKEVDIKQLLPIATHIIFNSFAQYHAYKDLILAKNK 133 Query: 117 K----------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLM 162 + IGLRINP S + ++ +P P SRLG K E + V+GL Sbjct: 134 QLSKLGLSSIKIGLRINPLFSRVQPLIYNPCAPHSRLGIPPKAFKEGLERYGLEGVSGLH 193 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +C+ L +++K FG + Q++W+++GGG H + + Y ++ Q +++ Sbjct: 194 FHTHCQQD-ASDLQEGLDHVKKHFGETLAQVQWLNMGGGQHMSKEGYALEVLIQAIQQLK 252 Query: 223 EKYSV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + Y +I+ EPGEA+ T L ++VLDI EN + I+D S+ H+PD L Sbjct: 253 KDYPNLAEIFCEPGEAVGYQTGFLLSSVLDIVENGAQIAILDVSITNHMPDCLEMPYKPE 312 Query: 281 IYP-----------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 I+ G + + G SCLAGD G ++FE P+++GDRI FED+ Y I Sbjct: 313 IFKVALDGSVQVGSEAGEFGYFLGGVSCLAGDFIGPYYFENPLQVGDRIIFEDMLHYTIV 372 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + N FNGI +P++ + + K +++F ++ Y Sbjct: 373 KNNTFNGIALPSLGLIEHN-QFKLLKKFDFSHYKER 407 >gi|325282109|ref|YP_004254651.1| diaminopimelate decarboxylase [Odoribacter splanchnicus DSM 20712] gi|324313918|gb|ADY34471.1| diaminopimelate decarboxylase [Odoribacter splanchnicus DSM 20712] Length = 381 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 71/367 (19%), Positives = 119/367 (32%), Gaps = 25/367 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+Y + + L + A G ++ A+K A + ++Q G S E Sbjct: 11 PTPFYYYNLELLKKTVQAAKSESAPYGYRVHYAVKANANPVLLRLISQQGLGADCVSGNE 70 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKKIG 119 + E F +T Y K + D FN S A +L KK Sbjct: 71 IRQALECGFPADTIVYAGVGKSDAEIELALQHDIFCFNCESLPEIQVIDGIAARLGKKAR 130 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 LRINP+V ++ G D + + GL FH + Sbjct: 131 IALRINPNVDAHTHHYITTGIEENKFGIYLYDLEHVITEVAKLKQIELIGLHFHIGSQIT 190 Query: 171 S---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-------KE 220 F I+++ + I+ GGG+ + K + Sbjct: 191 DMTVFRGLCIRANEIQRQMKERGLFLPHINFGGGLGIDYNEPYEKPIADFQSYFATFARF 250 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES- 278 F + QI+ E G +IV + L + VL + E ++ D+ + + L Sbjct: 251 FEPEPHQQIHFELGRSIVAHCGDLISKVLYVKEGKNRKFVILDAGMNDLLRPALYQAFHK 310 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 I + V G C + D FG+ + GD I+ Y + +N Sbjct: 311 IENISSDRPEEKYDVVGPICESADCFGKDVVLNETRRGDLIAIHSCGAYGEAMASRYNLR 370 Query: 338 NMPTIAV 344 ++P Sbjct: 371 DLPGSVF 377 >gi|117620267|ref|YP_855006.1| diaminopimelate decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561674|gb|ABK38622.1| diaminopimelate decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 416 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 110/385 (28%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S E Sbjct: 27 GTPLYVYSRATLERHWHAFDKAAGDIPHLICYAVKANSNLALLNLLARLGSGFDIVSGGE 86 Query: 63 V--MLGHEKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + +L + VA + E+ A+ + ++L + A + KK Sbjct: 87 LSRVLAAGGDPAKVVFSGVAKSEAEMRLALDKEILCFNLESEAELERLNRVAGGMGKKAR 146 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170 +R+NP + ++ G + + G+ H + Sbjct: 147 VSVRVNPDIDAGTHPYISTGLKQNKFGIPIEQAPAIYRKAAAMANIEIVGVDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + I + +GGG+ + + LK+ Sbjct: 207 ELNPFMEAADKLLRLIDGLAVEGIHIHHLDVGGGLGVNYGAEQPPHPSEYAEALKQKLAG 266 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI-- 281 + + EPG AIV N L T V + +D+ + + L I Sbjct: 267 RDLTLLFEPGRAIVANAGVLLTRVEYLKPGETRNFALIDAGMNDLLRPSLYGAWMNIIEV 326 Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P V G C GD G+ + G ++ Y + +N Sbjct: 327 DSRTAHEPALYDVVGPVCETGDFLGKERTLA-IAEGSLLAVRSAGAYGFTMSSNYNTRPR 385 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D + Sbjct: 386 AAEVLVDGAQSFLIREREQLADLWR 410 >gi|116072467|ref|ZP_01469734.1| Diaminopimelate decarboxylase [Synechococcus sp. BL107] gi|116064989|gb|EAU70748.1| Diaminopimelate decarboxylase [Synechococcus sp. BL107] Length = 459 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 55/396 (13%), Positives = 111/396 (28%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+Q L + K + A K ++ M + G + S Sbjct: 52 GTPLYVLDEQTLRSTCRAYRDALKRHYPGPSLPIYASKANSSLVMSSLVASEGLGLDAVS 111 Query: 60 LYEVMLG-HEKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ G+ + D E+ +N T++ + L++ K Sbjct: 112 AGELLTALRGGMPGDRMVLHGNNKSDEELLLAYNNNVTVVVDNQHDLDRLSALIPKDGNP 171 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + L + P + S+ G I + GL H + Sbjct: 172 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQVEPVLRGLIGQSWARLTGLHAHIGSQ 231 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224 + + +E +++GGG+ R + + Sbjct: 232 IFELEPHRDLAAVMADALKLARDLGHPVEDLNVGGGLGIRYVKSDDPPSIDRWVQVVAEA 291 Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 ++ EPG ++V TV +D + + Sbjct: 292 VIAACQARSLDLPRLMCEPGRSLVATAGVTLYTVGSRKTIPGIRTYVAIDGGMSDNPRPI 351 Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + T + G+ C +GD+ + K GD I+ YN Sbjct: 352 TYQSLYTCCVADRPLAEADETVNLVGKHCESGDVLLKDLPLPSTKSGDVIAVFATGAYNA 411 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + + + +D Sbjct: 412 SMSSNYNRIPRPAAVLVHDGAAELVQKREQPDDLLR 447 >gi|68271066|gb|AAY89059.1| meso-diaminopimelate decarboxylase [Streptomyces clavuligerus] Length = 463 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 121/398 (30%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + + + A K F + + L++ S E Sbjct: 63 GTPGYILDEDDFRDRARAWATALGHE-ADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 ++ + A++ K + AV + I+ ++ ++ + AQ L + Sbjct: 122 LLTALDAGMPADRIAFHGNNKSLEEIERAVRAGVGRIVLDSSQEIVRVAHVAQALGVRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 +RI V + G + + + + GL H + Sbjct: 182 GLIRITVGVEAHTHEFIATAHEDQKFGLPLAGGQAAEGVRRALGLDGLELIGLHSHIGSQ 241 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +++ ++ I LGGG+ + + + + Sbjct: 242 IFDTSGFEVAAHRVVGLLQQVRDEHGVELPEIDLGGGLGIAYTPDDDPREPRHIAKALHE 301 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 ++ +EPG AIV T V I + V VD + ++ Sbjct: 302 IVTRECEDAKLRPPRMSVEPGRAIVGPTAFTLYEVGTIKPLPGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYPNTGPYTA----MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + + A V G+ C +GDI + F + GD ++ Y Sbjct: 362 ALYDAEYSVALVSRASDAAAMLSRVVGKHCESGDIVVKDAFLPRDLAPGDLLAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + +R + + Sbjct: 422 CRSMARNYNHALRPPVVAVRDGAARVIVRRETEEEILR 459 >gi|88808911|ref|ZP_01124420.1| Diaminopimelate decarboxylase [Synechococcus sp. WH 7805] gi|88786853|gb|EAR18011.1| Diaminopimelate decarboxylase [Synechococcus sp. WH 7805] Length = 453 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 49/396 (12%), Positives = 106/396 (26%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKL-LLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ + + G L + A K ++ + + G + S Sbjct: 46 GTPLYVLDEASIRQACRAYREALERHYPGPSLAIYASKANSSMALTAVVASEGLGLDAVS 105 Query: 60 LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + + + E+ N ++ + L+ + + Sbjct: 106 AGELITALDGGMPADRMVLHGNNKSSEELALAYRNGVMVVADNQHDLDLLQTIVPDQGEP 165 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCE 168 + L + P + S+ G + V GL H + Sbjct: 166 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEPVLRSLQGASWARVEGLHAHIGSQ 225 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------- 218 + + +E +++GGG+ Sbjct: 226 IFELEPHRDLAAVMADALLLARTLGHPVEDLNVGGGLGIRYTASDDPPSIDAWVQVVGSA 285 Query: 219 ----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDY 272 ++ EPG ++V TV + I+ + VD + + Sbjct: 286 VASACRERNLELPRLLCEPGRSLVATAGVTLYTVGARKVVPGIRTYLSVDGGMSDNPRPI 345 Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + A + G+ C +GD+ + GD + YN Sbjct: 346 TYQSQYTACLADRPQARAEEMVTIAGKHCESGDVLLKDLAFPSCSSGDILVVLATGAYNS 405 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + + R D Sbjct: 406 SMSSNYNRIPRPAAVLISASEAELVQRREQPEDLLR 441 >gi|227432346|ref|ZP_03914338.1| diaminopimelate decarboxylase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351867|gb|EEJ42101.1| diaminopimelate decarboxylase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 431 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 66/395 (16%), Positives = 122/395 (30%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D + + I + V + A K FA ++ + Q S Sbjct: 27 GTPLAVYDVTLIRKTMRAFKRIFEQENVPYVVSYAGKAFATKAIYQVVAQENIHADVVSG 86 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + ++N K D + AV + TII + +L + + + Sbjct: 87 GELYTAIKADFPTQHLSFNGNNKSYDELVMAVENGVGTIIIDNFLELQLLSEITAEKNVI 146 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + I LRI+P +S + S+ G + I+ ++ GL H Sbjct: 147 QDILLRISPGISAHTHEFISTGQQDSKFGFDLQTGQAKQAYDIAIKDNHLHLRGLHAHIG 206 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFS 222 + F + + Q E I+ GGG D F + Sbjct: 207 SQIFDVTGFEKNAALLADTAYSWGWQPEVINTGGGFGIRYTDEDQPLPESKFADAIIRVL 266 Query: 223 EKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273 ++ +I++EPG +IV TV + VD + ++ L Sbjct: 267 KEKATQYDWAMPEIWIEPGRSIVGPAGQTLYTVGSRKDIPGIRNYLAVDGGMGDNIRPAL 326 Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + N + G+ C +GD+ K GD +S Y Sbjct: 327 YQANYEAVLANQPNAKSEEIVRIAGKYCESGDVLVWQEELPATKPGDVLSVLATGAYGYA 386 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + + ++ + Sbjct: 387 MASNYNRNPRPAVVFVENGQHQVVVERETFEHIIS 421 >gi|257069086|ref|YP_003155341.1| diaminopimelate decarboxylase [Brachybacterium faecium DSM 4810] gi|256559904|gb|ACU85751.1| diaminopimelate decarboxylase [Brachybacterium faecium DSM 4810] Length = 470 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 62/407 (15%), Positives = 125/407 (30%), Gaps = 45/407 (11%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNA-----GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 + TP +++D+ + A G + A K F + + + G Sbjct: 59 VGTPAFVLDEDDFRHRARAFRDAFAEAFRPHRGADVYYAGKAFLCGAVARWVEEDGLGLD 118 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + E+ + F A + K A+ + I+ +++ ++++ + A + Sbjct: 119 VCTGGELAVALRAGFPASRIALHGNNKSASEIRRALEAGVGRIVIDSLDEIDQVDEIAAR 178 Query: 114 LHKKIG--LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLM 162 L + G LR+ V + G E +++ ++ GL Sbjct: 179 LGLRAGVMLRVTTGVEAHTHEFIATAHEDQKFGLSLTGGSAFEAVHRVLDAPQLDLLGLH 238 Query: 163 FHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218 H + F +L+ + + I+ + LGGG + L Sbjct: 239 SHIGSQIFDTGGFEVAARRVLQLVARVRDELGHTIDQLDLGGGFGVMYNTQHTPSTPEAL 298 Query: 219 -----------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--- 264 E + EPG AI +T +V + + Sbjct: 299 AAGIAGIVEKQCHELELDVPHLAFEPGRAIAGPSTQTLYSVGTVKDVRLGGPHHRVYVSV 358 Query: 265 ---VEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGD 316 + +V L + + + P V G+ C +GDI + + V+ GD Sbjct: 359 DGGMSDNVRTALYDADYSCLLTGRVSEAAPEVVRVVGKHCESGDIVVKDEYLPADVRRGD 418 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 IS Y + + +N + P + IR + D Sbjct: 419 LISVPVTGAYCYSLASNYNHVPRPPVIAVRDGEIRTLIRRETEEDLL 465 >gi|284035161|ref|YP_003385091.1| diaminopimelate decarboxylase [Spirosoma linguale DSM 74] gi|283814454|gb|ADB36292.1| diaminopimelate decarboxylase [Spirosoma linguale DSM 74] Length = 424 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 66/387 (17%), Positives = 119/387 (30%), Gaps = 30/387 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D K++ + +K+ A K + + Q S S+ E Sbjct: 25 PLYVYDADKIIEKIGLLRSSFAGVNLKIKYAAKALTNISILKLMRQQGVEMDSVSVNEAR 84 Query: 65 LGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 +G F + + E +S + +++ L I +RI Sbjct: 85 MGMMAGFEPGQIMFTPSGVSFEEIREAVSLGLQLNVDSLPLLEWVGQTYGT-QVPISIRI 143 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLCFS 176 NP +S I S+ G +E V GL H + K+ F Sbjct: 144 NPHISEGGNIKISTGHADSKFGISILQRDQIRAVVEQYQIPVAGLHIHTGSDFKNAGAFL 203 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV--------KDFCQRLKEFSEKYSVQ 228 + + + + +I G G K+ + F + Y Sbjct: 204 KGAEVL-FDLASDYPNLSFIDFGSGFKVAYKEGDHITDVEELGHQVSAAFQNFCKNYGRD 262 Query: 229 I--YLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES------- 278 + + EPG+ +V+ + L + EN + VDS + + + Sbjct: 263 LELWFEPGKFLVSESGHLLVKTNIVKENPTRTFVAVDSGLNHLIRPMMYDAYHDIKNISN 322 Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + +T T V G C D F VK GD +SFE+ Y + + +N Sbjct: 323 PSIPGEDTAEKTYNVVGYICET-DTFATDRALPEVKPGDVLSFENAGAYGFSMASNYNAR 381 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 P + + ++ D Sbjct: 382 FRPAEVLVYEGTPYLIRQRETFEDLVR 408 >gi|303243073|ref|ZP_07329522.1| Orn/DAP/Arg decarboxylase 2 [Acetivibrio cellulolyticus CD2] gi|302589387|gb|EFL59186.1| Orn/DAP/Arg decarboxylase 2 [Acetivibrio cellulolyticus CD2] Length = 422 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 62/393 (15%), Positives = 117/393 (29%), Gaps = 30/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIRENARKLKEAFSWNKGFKEYFAVKATPNPSILKVLKEEGCGADCSSFT 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ F G+ ++ + TI + + ++ + A I Sbjct: 79 ELLMSKAVGFSGDEIMFSSNATPKEDFMLARELNSTINLDDFTHIDFLEKVAGIPET-IS 137 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169 R NP + ++ G + E K ++ G+ Sbjct: 138 CRFNPGGDFVIDNQIMDTPKDAKYGFTREQMTEGYKKLISKGVKHFGMHAFLASNTVANE 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + K + I +I+L GG+ + + E K +I Sbjct: 198 YYPVLARTLFKTAVELKEETGAHIAFINLSGGVGIPYRPEQQPVDIHSIGEEIRKAFEEI 257 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 Y E G ++ L +T + K + +D+ + + Sbjct: 258 LVPAGMGDVAIYTELGRFMLGPYGCLVSTAIHEKHIHKEYIGLDACAANLMRPAMYGAYH 317 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + G C D F + IGD I D + + Sbjct: 318 HITVMGKENRPCDHKYDITGGLCENNDKFAIDRMLPKIDIGDLIVLHDTGAHGFAMGYNY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG ++ IR + DY+ L Sbjct: 378 NGKLRSAELLLREDGGVELIRRAETPADYFATL 410 >gi|290957373|ref|YP_003488555.1| diaminopimelate decarboxylase [Streptomyces scabiei 87.22] gi|260646899|emb|CBG69996.1| diaminopimelate decarboxylase [Streptomyces scabiei 87.22] Length = 463 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 119/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D+ + A K F + + L++ S E Sbjct: 63 GTPAYFVDEADFRARARAWRTAFGQ-DADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + A++ K D AV + I+ ++ ++ + AQ L ++ Sbjct: 122 LATALSAGMPADRIAFHGNNKSTDEIHRAVEAGVGRIVLDSFQEIVRVAHIAQSLGRRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 +R+ V + G + + + + G+ H + Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALRLDGLELIGIHSHIGSQ 241 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F ++ ++ I LGGG+ + + + Sbjct: 242 IFDTSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSADDPREPHEIAKALTE 301 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +I +EPG A+V T V I + V VD + ++ Sbjct: 302 IVNRECDAARLRTPRISVEPGRAVVGPTAFTLYEVGTIKPLDGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + P A V G+ C +GDI F + GD I+ Y Sbjct: 362 ALYDAEYSVALVSRTSEAEPMLARVVGKHCESGDIVVRDAFLPADLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + N +R + D Sbjct: 422 CRSMASNYNHVLRPPVVAVNDGQARVIVRRETEEDLLR 459 >gi|297829990|ref|XP_002882877.1| hypothetical protein ARALYDRAFT_478856 [Arabidopsis lyrata subsp. lyrata] gi|297328717|gb|EFH59136.1| hypothetical protein ARALYDRAFT_478856 [Arabidopsis lyrata subsp. lyrata] Length = 485 Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 62/387 (16%), Positives = 123/387 (31%), Gaps = 27/387 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ NL+ + + A+K + + L G S E+ Sbjct: 94 PFYLYSKPQITRNLEAYKEALEGVTSVIGYAIKANNNLKILEHLRSLSCGAVLVSGNELR 153 Query: 65 LGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGL 120 L F +N ++ + ++ LN + ++ + L Sbjct: 154 LALLAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLL 213 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSF 172 RINP V S+ G + + + + G H Sbjct: 214 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKLVGAHCHLGSTITKV 273 Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224 F + + ++ ++++GGG+ D ++E Sbjct: 274 DIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLS 333 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +++ NT V + N KN +++D S+ + L Sbjct: 334 RDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELV 393 Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P V G C + D G+ G + D Y ++ + +N Sbjct: 394 SPPPPEAEVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKM 453 Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364 P DG+I IR +++D+ Sbjct: 454 RPPEYWVEEDGSISKIRHAETFDDHLR 480 >gi|320530481|ref|ZP_08031539.1| putative diaminopimelate decarboxylase [Selenomonas artemidis F0399] gi|320137314|gb|EFW29238.1| putative diaminopimelate decarboxylase [Selenomonas artemidis F0399] Length = 425 Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 62/393 (15%), Positives = 116/393 (29%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++++ N G + A+K + L++ GT SS+ Sbjct: 21 PTPFHIYDERRIRANYRRLRDAFAWAPGFREHFAVKALPNPRIVQLLHEEGAGTDCSSIA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+++ GE D D + + + A+ L Sbjct: 81 ELLISEAAGVTGEEIMLTSN--DTPFDEFQKAIELGAVINLDDITHLAYMAEHAGVPEVL 138 Query: 121 RINPSV-SYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFHNNCENKSFLCF 175 + + ++ G + + V H + Sbjct: 139 SFRYNPGDTIEGNDIIGKPVEAKYGLTHTQMLEGYARARAMGVRRFGLHTMVISAELRTE 198 Query: 176 ------SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 M + + +E+++LGGG + + E+ +I Sbjct: 199 AFLLTARIMFELAVELEEKLGIHVEFVNLGGGFGIPYRPEEDPVDFAAVGAGIERLYNEI 258 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E G AI + L + VL + K+ V +DS + + L Sbjct: 259 MRPAGLGDVAIRTESGRAITGDAGWLVSMVLHKKDTYKHYVGLDSCMANLMRPALYGAYH 318 Query: 279 ATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGD I D + + Sbjct: 319 HITVLGKEHAPADHVYDVTGSLCENNDKFAIDRALPQIGIGDIIVIHDTGAHGSAMGFNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DGT++ IR + +DY+ L Sbjct: 379 NGKLHCAELLLREDGTVELIRRAQTLDDYFATL 411 >gi|167588224|ref|ZP_02380612.1| diaminopimelate decarboxylase [Burkholderia ubonensis Bu] Length = 412 Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 122/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + SL E Sbjct: 16 GTPLWVYDADVIRDRIAQLRRFDV-----IRYAQKACSNVHILKLMRDEGVLVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + + A Sbjct: 71 IERSLAAGFQPDGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARIGEHA--SGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENK 170 ++ LRINP + + P S+ G + + + G+ H Sbjct: 129 RVWLRINPGFGHGHSNKTNTGGPQSKHGIWIGDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + I+ IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVDHYFSQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES- 278 + V+I +EPG +V + TL V ++ K+ + +D+ + + Sbjct: 248 QHLGHPVRIEIEPGRFLVAESGTLVAEVQSVNRRPKHDFVLIDAGFNDLMRPAMYGSYHG 307 Query: 279 ATIYPNTGPYT-------AMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 T++ G + G C +GD+F + +IGD + D Sbjct: 308 ITVHAPDGAEPDGRPLAHVAIAGPLCESGDVFTQDAGGVVTHRHLPQPQIGDLLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGSSMSSNYNSRPLAPEVLVDRGAPRLIRRRQTITELLA 407 >gi|126445408|ref|YP_001063058.1| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia pseudomallei 668] gi|126224899|gb|ABN88404.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 668] Length = 1110 Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 103/372 (27%), Positives = 181/372 (48%), Gaps = 12/372 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D++ L L + + ++G +LL LK F+ G + + ++DG +SS +E Sbjct: 731 DTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPFE 790 Query: 63 VM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 G H A +D ++ ++ NCD + N++SQ + D A GL Sbjct: 791 AAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCGL 849 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 RINP S DP RP S+LG + + G+ FH NC++ F Sbjct: 850 RINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFSR 909 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + ++++EK + + WI+LGGG Y + K E + V +++EPG Sbjct: 910 LAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEPG 968 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAMV 292 AIV T+ +V+D+ ++ + V + H P+ YQ + + + ++ Sbjct: 969 AAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYLL 1028 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G SCLAGD+FG + F+ P+++G R++F + Y + + + FNGIN+P++ + DG + Sbjct: 1029 AGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGALA 1088 Query: 353 AIREFSYNDYYN 364 A++ FSY D+ Sbjct: 1089 AVQRFSYEDFLR 1100 >gi|224370799|ref|YP_002604963.1| LysA4 [Desulfobacterium autotrophicum HRM2] gi|223693516|gb|ACN16799.1| LysA4 [Desulfobacterium autotrophicum HRM2] Length = 417 Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 66/391 (16%), Positives = 122/391 (31%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D+ +L G + A+K + + G SS Sbjct: 23 GTPFHIYDEAGILETGARLKTAFSKIPGFREYYAVKALPNPSIMKIMQGLGFGFDCSSTP 82 Query: 62 EVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E++L + + + + +I N K + + I Sbjct: 83 EILLARQINSPSQDIMFTSNNTSQKDFETACMDGGVILNLDDIS--LVPKVPVMPELICF 140 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCE----NK 170 R NP + N S+ G I++ ++ GL Sbjct: 141 RYNPGPR-REGNKIIGNPVESKYGVSYDQIIDAYKAAMDRGAKRFGLHTMLASNELDYTY 199 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----------KE 220 +L ++ E+I++GGG+ + + L + Sbjct: 200 MVETTRMILDMVKMVSTALNITFEFINIGGGLGIPYRPEDKPLDIEALGRETGDLLAKFQ 259 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + +S ++++E G I L TTV++ + + V VD+S+ A + + Sbjct: 260 QTHDWSPKLFMESGRFITGPHGALVTTVINHKDIYRQYVGVDASMSALMRPGMYNAYHHI 319 Query: 281 IY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + T V G C D F + GD + D + +NG Sbjct: 320 HIPGKEHSKDLQTVDVVGSLCENNDKFAVQRTLPRTEEGDLLVIHDTGAHGHAMGFNYNG 379 Query: 337 INMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 P + DGTI+ IR DY+ L Sbjct: 380 NLRPKELLLKTDGTIELIRRAERVEDYFATL 410 >gi|241766269|ref|ZP_04764164.1| diaminopimelate decarboxylase [Acidovorax delafieldii 2AN] gi|241363637|gb|EER59039.1| diaminopimelate decarboxylase [Acidovorax delafieldii 2AN] Length = 417 Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 51/397 (12%), Positives = 107/397 (26%), Gaps = 47/397 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + A K + + + + + S E Sbjct: 18 GTPLWVYDAATVRQRIAQLSNFE-----TIRFAQKACSNIHILRLMREQGVKVDAVSRGE 72 Query: 63 VMLGHE--------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQK 113 ++ G + D A + + + ++ A Sbjct: 73 ILRALAAGYQAGTPGEGPAEIVFTADLFDAATLACVV--EHGVPVNAGSIDMLHQLGAAS 130 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNC 167 + LRINP + + S+ G D I + GL H Sbjct: 131 PGHAVWLRINPGFGHGHSNKTNTGGEHSKHGIWHTDLPAALAAIRQHGLKLAGLHMHIGS 190 Query: 168 ENKSFLCFSAMLKNIEKEFGHF--ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-- 223 +E ++ IS GGG+ +D Q + Sbjct: 191 GVDYRHLEQVCGAMVELVRATHAAGHDLQAISAGGGLSIPYRDGDPVIDTQHYHGLWDAA 250 Query: 224 --------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274 ++ + + +EPG +V + L V N ++ D+ + + Sbjct: 251 RQQAEAIVRHPLGLEIEPGRYLVAESGVLLGEVRATKNAGNNHFMLLDTGFNELMRPSMY 310 Query: 275 YQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFED 322 ++V G C +GD+F + ++GD + D Sbjct: 311 GSYHTMSVLRRDGSTAAERPSVVAGPLCESGDVFTQGDGGVVLPRNLPDARVGDLLVIHD 370 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 Y + + +N + + + R + Sbjct: 371 AGAYGASMSSNYNTRPLVAEVLFDGGQARLIRRRQTV 407 >gi|240169521|ref|ZP_04748180.1| diaminopimelate decarboxylase LysA [Mycobacterium kansasii ATCC 12478] Length = 468 Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 120/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + G + A K F + + + ++ E Sbjct: 60 GTPLFVVDEDDFRSRCQEIAAAFGG-GHNVYYAAKAFLCSEIARWVEEEGLSLDVATGGE 118 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + K AV + ++ +++ ++ + A + + Sbjct: 119 LAVALHADFPPERITLHGNNKSVAELTAAVKAGVGHVVLDSMIEIERLDAIAAQAGVIQD 178 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ + GL H + Sbjct: 179 VLVRVTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFAADHLRLVGLHSHIGSQ 238 Query: 169 NKSFLCFSAMLKNIEKEFGHFI--------TQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + Q+ + LGGG+ + L Sbjct: 239 IFDVAGFEIAAHRVIGLLREVVGEFGAEKTAQLSTVDLGGGLGISYVPADDPPPISELAA 298 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 + ++ +EPG AI T V + + + V VD Sbjct: 299 KLSAILSNESAAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATANRRYVSVDG 358 Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L E + + A + G+ C +GDI + ++ GD + Sbjct: 359 GMSDNIRTALYDAEYDVRLVSRVSDAPAVPARLVGKHCESGDIIVRDTWMPEDLRPGDLL 418 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I P + +R + +D + Sbjct: 419 GVAATGAYCYSLSSRYNLIGRPAVVAVRRGKARLVLRRETVDDLLS 464 >gi|54023015|ref|YP_117257.1| putative diaminopimelate decarboxylase [Nocardia farcinica IFM 10152] gi|54014523|dbj|BAD55893.1| putative diaminopimelate decarboxylase [Nocardia farcinica IFM 10152] Length = 473 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 61/406 (15%), Positives = 118/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + + ++ A K F + L S E Sbjct: 64 GTPLFVVDEDDFRSRCRDMVRAF-GPDARVHYASKAFLCGEIARWLRDEGLSLDVCSGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKAQKL--HKK 117 + + F E A + K +++ ++ + + A++ + Sbjct: 123 LAIALHAGFPAERIALHGNNKSVAELEAAVAAGVGHVVVDSLIEIERLEAVAERAGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E E+ + GL H + Sbjct: 183 VLVRVTVGVEAHTHEYISTAHEDQKFGFSIAGGDAMEALARVFEASNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLKNIEKEFGHFIT--------QIEWISLGGGIHFTDKDYPVKD----FCQ 216 F + + I QI + LGGG+ + F Sbjct: 243 IFEIDGFEIAARRMLGLLRAAIDTFGVERTAQISTLDLGGGLGISYLPEDNPPPLDEFAA 302 Query: 217 RLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDS 263 +L+ + I +EPG AI T V I + + V VD Sbjct: 303 KLRAIVAEEAARAGLPEPTIAVEPGRAIAGPGTVTVYEVGTIKDVSLDAGLRRRYVSVDG 362 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318 + ++ L + + A V G+ C +GDI + V GD I Sbjct: 363 GMSDNIRPALYQADYDCRLVSRPSEAEAVLARVVGKHCESGDIVIRDTWMPADVGPGDLI 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + +R + D + Sbjct: 423 AVAATGAYCYSMSSRYNQLTRPAVVAVRDGSARLVLRRETVADLLS 468 >gi|300789615|ref|YP_003769906.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] gi|299799129|gb|ADJ49504.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] Length = 476 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 54/411 (13%), Positives = 116/411 (28%), Gaps = 50/411 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + + + A K F + + + + S E Sbjct: 64 GTPLFVVDEADFKSRCADYAEAFDDP-SLVHYASKAFLSIEIARWVAEQGLSLDVCSGGE 122 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTII--FNTVSQLNKFKDKA--QKLHKK 117 + + F E ++ K ++ ++ + D A + + Sbjct: 123 LAVAQRADFPAERITFHGNNKSPAELEAAVVAGVGTVVLDSYFEIARLADIAARHDVVQS 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + + + + GL H + Sbjct: 183 VLIRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNARSLKLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLKNIEKEFG--------HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + + Q+ + LGGG + ++ Sbjct: 243 IFDADGFEVAARRVVGLLADLAKEHGPELLDQLSLVDLGGGFGIAYTEKDNPPPPAQMIT 302 Query: 221 FSEKYSVQIYL-----------EPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 + + EPG AI T V I + + + V VD Sbjct: 303 QIREIVRKECAYAGLPVPRIAGEPGRAIAGPGTITLYEVGTIKDVSLGDESARRYVSVDG 362 Query: 264 SVEAHVPDYLLYQESATIY------PNTGPYTA---MVCGRSCLAGDIFGEFHFEKP-VK 313 + ++ L N P A V G+ C +GDI + + Sbjct: 363 GMSDNIRTALYDAVYDVRLVSRSAGDNEQPVPAVLSRVVGKHCESGDIVVRDCWLPDTLA 422 Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 GD ++ Y + + +N + P + + +R + +D Sbjct: 423 PGDLLAVAATGAYCYSMASTYNRMPRPAVVAVRNGSSRLLLRRETTDDMLR 473 >gi|311740632|ref|ZP_07714459.1| diaminopimelate decarboxylase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304152|gb|EFQ80228.1| diaminopimelate decarboxylase [Corynebacterium pseudogenitalium ATCC 33035] Length = 445 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 64/404 (15%), Positives = 135/404 (33%), Gaps = 43/404 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ D+ + + A K F + + + +N+ ++SL E Sbjct: 39 QTPLYVFDEDDFRSRCQDMARAFGGPEH-VHYASKAFISKKIVNWVNEEGLCLDAASLNE 97 Query: 63 VMLGHEK-FGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + KD E + ++ + +L + A + + Sbjct: 98 LKIALAAEFPAERITTHGNNKDEEYLRLCVDAGVGHVVIDNELELEELNRIAGEAGKVQP 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ P V + G K +E++ +++GL H + Sbjct: 158 VMIRVKPGVDAHTHEFIATAHEDQKFGISLATGAAFAAAKRCLEADNLHLSGLHCHVGSQ 217 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK----- 219 + F ++ + + +E + LGGG Y +R+ Sbjct: 218 VFNAEGFKLAAERVMGLYRQIYTELGVTLEELDLGGGFGIPYMPYEEALDIERVAGDMLG 277 Query: 220 ------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265 E + + +EPG ++V + V + + ++ + VD + Sbjct: 278 AVKDTAEELGIAAPFLLVEPGRSLVAGSAVTVYRVGTVKDVETGKSDLPLRRYISVDGGM 337 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320 ++ L + + ++ V G C +GDI E ++ GD I+F Sbjct: 338 SDNIRPALYGSAYDVRVVNRFSDGEEVSSRVVGFHCESGDILLEDGELPNDIQSGDLIAF 397 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 GY + +NG P + V T +R + D + Sbjct: 398 AATGGYQYMMSSRYNGAVRPAVVATRVGQTKPMLRRETIEDLLS 441 >gi|291519892|emb|CBK75113.1| Diaminopimelate decarboxylase [Butyrivibrio fibrisolvens 16/4] Length = 423 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 64/392 (16%), Positives = 120/392 (30%), Gaps = 29/392 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I TP+ + D++ + N N G K A+K + L + G +S Sbjct: 18 IPTPFNIYDEKGIRENARKVNEAFSWNKGFKEYFAVKANPNPFILKILQEEGCGVDCASY 77 Query: 61 YEVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ L +E F G+ ++ E + + + ++ ++ KK+ Sbjct: 78 VELALSNEIGFKGDDIMFSSNDTPASEYQYADDLGVIVNLDDFTHIDFYEKVVGHFPKKM 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVN--GLMFHNNCEN--- 169 R NP Y N S+ G + E+ K V G+ Sbjct: 138 SCRYNPGGVYELSNGIMDNPGDSKYGMTKEQIFEAYQILRDKGVEEFGIHAFLVSNTVTN 197 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + I + + +++L GG+ + + ++ E K + Sbjct: 198 DYYPALARTLFELIVELKEKTGISLSFVNLSGGVGIAYRPDQKPNDILKIGEGVHKAFDE 257 Query: 229 IYL-----------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I + E G ++ L TT + K + VD+ + + Sbjct: 258 ILVPAGLGDVAILTEMGRFMMGPYGGLVTTAIHEKHIYKEYIGVDACAVDLMRPAIYGSY 317 Query: 278 SATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + V G C D F + GD + D + + Sbjct: 318 HHVTVLGKENAPEDHVYDVTGSLCENCDKFAVDRQLPKIDKGDILFIHDTGAHGYSMGYN 377 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 +NG + DG+ K IR + DY Sbjct: 378 YNGKLKSAEVLLKEDGSFKLIRRPETIKDYLA 409 >gi|325841752|ref|ZP_08167446.1| diaminopimelate decarboxylase [Turicibacter sp. HGF1] gi|325489871|gb|EGC92222.1| diaminopimelate decarboxylase [Turicibacter sp. HGF1] Length = 430 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 117/399 (29%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D+ L N K G ++ A K F M + + S Sbjct: 29 QTPLYVFDEALLRQNCKDYRKHFKVEERGNRVAYAGKAFLPLYMCHLIKEEGLYLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ F + ++ K + + + + +L K Sbjct: 89 GELYTAYKADFPMDHVLFHGNNKTFDEINMGLEYGVGVFVVDNYYELETLNTMCHKRGKQ 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + + LRI P + + S+ G + + E N+ GL H Sbjct: 149 QNVYLRITPGIEAHTHDYIKTGQIDSKFGFTLSNGDLQRCLEVFHKYEHLNLIGLHAHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD--------- 213 + M+ ++ F +I + LGGG+ + Sbjct: 209 SQIFDVNPFLDEVEIMMTLVKDIKEQFGFEITDVDLGGGVGVYYTEKDAPKSIAQFCEAI 268 Query: 214 --FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 Q + E + ++ +EPG +IV N + V + + V + ++ Sbjct: 269 LTKAQTVCETLQIDIPRLIIEPGRSIVANAGSTLYMVGSMKDIKDVRTYVSVDGGMTDNI 328 Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + G+ C +GDI ++ GD + Sbjct: 329 RPSLYQAVYECAIANWMESGNERHVTIAGKCCESGDILITDVDVNKIESGDILIITSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I + R +Y + + Sbjct: 389 YGYSMSSNYNKIPKAAVVAVKDGEAQLICRRQTYEELLS 427 >gi|261367053|ref|ZP_05979936.1| diaminopimelate decarboxylase [Subdoligranulum variabile DSM 15176] gi|282571172|gb|EFB76707.1| diaminopimelate decarboxylase [Subdoligranulum variabile DSM 15176] Length = 421 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 59/392 (15%), Positives = 121/392 (30%), Gaps = 30/392 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP++L D++ + N N G K A+K + L + G SS Sbjct: 20 VPTPFHLYDEKGIRENARRVNAAFAWNKGFKEYFAVKATPNPYILKILQEEGCGVDCSSY 79 Query: 61 YEVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+++ F G ++ ++ I + ++ + + A Sbjct: 80 TELLMSEACGFTGSDIMFSSNDTPVQDMQKAYELGAYINLDDLTHVEFLQQVAGIPKTIC 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172 R NP + N ++ G ++ K + G+ + Sbjct: 140 C-RYNPGGVFDLGNGIMDNPGDAKYGMSEDQMAQAYTKLMALGAEEFGIHAFLASNTVTD 198 Query: 173 LCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + + +I++I+L GG+ + + ++ E K + Sbjct: 199 EYYPKLAGILFRLAVRLHERTGAKIKFINLSGGVGIAYRPEQRSNDIAKIGEGVRKQYEE 258 Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I + E G ++ L TTVL K + VD+ + + Sbjct: 259 ILVPAGLGDVALFTEMGRYMLAPYGGLVTTVLHEKHIYKEYIGVDACAANLMRPAMYGAY 318 Query: 278 SATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + + G C D F + GD + D + + Sbjct: 319 HHITVLGKESKPCDHKYDITGGLCENNDKFAIDRMLPKIDKGDVLFIHDTGAHGFSMGYN 378 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 +NG + DG+ + IR + DY+ Sbjct: 379 YNGKLRSAEVLLKEDGSHQLIRRAETPEDYFA 410 >gi|297622385|ref|YP_003703819.1| diaminopimelate decarboxylase [Truepera radiovictrix DSM 17093] gi|297163565|gb|ADI13276.1| diaminopimelate decarboxylase [Truepera radiovictrix DSM 17093] Length = 385 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 111/369 (30%), Gaps = 12/369 (3%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ D + + + +LL A+K + L G S+ E+ Sbjct: 18 TPTYVYDLDAIGDRVARLRAAL--PTAELLYAVKANPCGAVLRHLAAAGLGAEVISVGEL 75 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-HKKIGLR 121 F +D + A + + SQ ++ A + + LR Sbjct: 76 ARARRAGFPEGRILLGGPRQDPPLVAAAWGVGWVSLDNPSQWRGWQRFAAREGAPRFLLR 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAM 178 +NP + S+ G + + +++ G H + + + Sbjct: 136 LNPGLDPRTHEHLATGAARSKFGMPFGELAALGAALGEHLAGFHVHIGSQITELGAYEPV 195 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + F + + LGGG P + + ++ ++ LEPG +V Sbjct: 196 FAQLGALLTRF-PHADTLDLGGGFAVPGFALP-EFSARVRAFLAQVPFRRLLLEPGRFLV 253 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY---TAMVCGR 295 + L T VL + E VI D+ + + L + +A + G Sbjct: 254 AESGVLLTRVLHVKEGPVRHVIADAGMADLLRPALYGAQHPVRVLGAADGASGSADLDGP 313 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C D + G ++ E Y + + P V A R Sbjct: 314 LCENADRLARGVALPALTPGTLLAVEQAGAYGFAMASNYASSLRPAEVVVAGGEVRLARR 373 Query: 356 EFSYNDYYN 364 + +D Sbjct: 374 RETPDDLVQ 382 >gi|282900558|ref|ZP_06308500.1| Diaminopimelate decarboxylase [Cylindrospermopsis raciborskii CS-505] gi|281194358|gb|EFA69313.1| Diaminopimelate decarboxylase [Cylindrospermopsis raciborskii CS-505] Length = 466 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 46/398 (11%), Positives = 112/398 (28%), Gaps = 36/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ + ++L A K + + + G S Sbjct: 60 GSPLYILDELTVRTACQQYRDAFNKYYKGQSQILYASKAWNCLAVCAIVASEGLGIDVVS 119 Query: 60 LYEVMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + + E+ + TI+ + +L ++ + Sbjct: 120 GGELYTALTAGMSPDKIYLHGNNKSHHELIFAVETGCTIVVDNWYELKTLVAILEQEDQA 179 Query: 118 IGLRIN----PSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNN 166 +RI P + S+ G D + + GL H Sbjct: 180 KKIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLPEVFSFVSQQSRLHCVGLHAHIG 239 Query: 167 CENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--------FC 215 + + + + + ++ +++GGG+ + C Sbjct: 240 SQIFERQPHRDLAAVMVQWLHEAKQYNLELAELNVGGGLGIKYTESDDPPSIEEWSRAIC 299 Query: 216 QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 + ++ + + ++ EPG +++ T+ V + + Sbjct: 300 EVVQSVCAEENLPLPKLLCEPGRSLIATGGVTAYTIGSTKTIPDIRTYVTIDGGMSDNPR 359 Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + N T + G+ C +GDI + + GD + Y Sbjct: 360 PITYQSVYRAVVANKMSAPLTETVTLAGKHCESGDILIKNVQLPKTEPGDVLVVMTTGAY 419 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + +N + P + ++ +Y D Sbjct: 420 NYSMASNYNRLPRPAAVLVANGEANLILQRETYQDIIR 457 >gi|171320534|ref|ZP_02909560.1| diaminopimelate decarboxylase [Burkholderia ambifaria MEX-5] gi|171094227|gb|EDT39308.1| diaminopimelate decarboxylase [Burkholderia ambifaria MEX-5] Length = 412 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 120/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + SL E Sbjct: 16 GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNLHILKLMRDERVCVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + + A Sbjct: 71 IERSLAAGFSPAGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARVGEHA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + IE IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVDLVASLGHDIEAISAGGGLSIPYRDGEPRVDVGHYFSQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 ++V+I +EPG +V TL T V ++ K+ + +D+ + + A Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 307 Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G C +GD+F + +IGD + D Sbjct: 308 VSVHAPDGALPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407 >gi|323483857|ref|ZP_08089234.1| diaminopimelate decarboxylase [Clostridium symbiosum WAL-14163] gi|323692859|ref|ZP_08107085.1| diaminopimelate decarboxylase [Clostridium symbiosum WAL-14673] gi|323402811|gb|EGA95132.1| diaminopimelate decarboxylase [Clostridium symbiosum WAL-14163] gi|323503088|gb|EGB18924.1| diaminopimelate decarboxylase [Clostridium symbiosum WAL-14673] Length = 421 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 67/391 (17%), Positives = 124/391 (31%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TPY+L D++ + N + N G + A+K + D L + G SSL Sbjct: 20 PTPYHLYDEKGIRENAERLNKAFAWNKGFREYFAVKATPNPFIIDILKKTGSGADCSSLT 79 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ KF GE ++ E I + + ++ + + + I Sbjct: 80 ELMMAKAMKFEGEKIMFSSNDTPPEEFKLADELGAIINLDDFTHIDFLEKTIGHIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N S+ G + ++++ G+ Sbjct: 140 CRYNPGGLFKISNDIMDNPGDSKYGMTTEQLFEAFKVLKAKGAKYFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + K I +I+L GG+ + + + E K ++ Sbjct: 200 YYPMLAKILFEVAVKLKEETGADIRFINLSGGVGIPYRPGQEPNDIFAIGEGVRKVYEEV 259 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 Y E G ++ L TT + K + VD+ + + Sbjct: 260 LVPAGMGEVALYTELGRYMLGPYGCLVTTAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F V IGD + D + + + Sbjct: 320 HITVMGKEDRPCDHKYDVAGSLCENNDKFAIDRMLPKVDIGDILVIHDTGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR + DY+ Sbjct: 380 NGKLKSAELLLKEDGSVQMIRRAETPEDYFA 410 >gi|149185865|ref|ZP_01864180.1| diaminopimelate decarboxylase [Erythrobacter sp. SD-21] gi|148830426|gb|EDL48862.1| diaminopimelate decarboxylase [Erythrobacter sp. SD-21] Length = 420 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 51/375 (13%), Positives = 106/375 (28%), Gaps = 23/375 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP Y+ + L+ + + A+K + L G S Sbjct: 25 VGTPVYVYSRATLVRHARVFRDALSELKQPHIAFAVKANPNLAVLRLLANEGYGADVVSG 84 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ E ++ K + + + + A++ Sbjct: 85 GELTRALKAGMKPEDIVFSGVGKTHAELQQGLEEGIGQFNIESEEEGYELAAIARRFGKR 144 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCENK 170 LR+NP V + ++ G ++ + ++ + ++ Sbjct: 145 AACALRVNPDVDARTHEKISTGKRENKFGVPLDRAAAIYTALAKEEGLDMRGIAVHIGSQ 204 Query: 171 SFLCFSAMLKNIE-----KEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221 + KE + LGGG+ + ++ + Sbjct: 205 LADLEPLEAAFGKVGALIKELRAGGCSVTHADLGGGLGVPYKAGEELPAPAEYGAMVTRL 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES-- 278 + ++VQ+ EPG I N L T V+ + I+ +VD+++ + Sbjct: 265 TRDWNVQLMFEPGRVIAGNAGVLLTRVIRVKRGIERPFLVVDAAMNDLARPAMYGAWHDF 324 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + P A + G C GD F + GD F Y + +N Sbjct: 325 EAVEPTGEKTIAHIVGPICETGDTFAMDRKIDVLAPGDLAVFRTAGAYGATMASSYNSRG 384 Query: 339 MPTIAVKNVDGTIKA 353 + + D Sbjct: 385 FVAEVLVDGDRYAVV 399 >gi|312868979|ref|ZP_07729157.1| diaminopimelate decarboxylase [Lactobacillus oris PB013-T2-3] gi|311095482|gb|EFQ53748.1| diaminopimelate decarboxylase [Lactobacillus oris PB013-T2-3] Length = 438 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 66/398 (16%), Positives = 124/398 (31%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ + + + + ++ A K FAA M+ +Q S Sbjct: 31 GTPLVVYDVSQIRHQIRAFKRVFEANQVNYEVSYASKAFAAIAMYQVADQEGAHVDVVSG 90 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F +++ K D + AV +N I+ + ++ +L + Sbjct: 91 GEMYTALKAGFPLSHASFHGNNKSYDELVMAVKNNIGVIVVDNFYEIKLLNQVLTELDAR 150 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G + + S + GL H Sbjct: 151 VKVMLRITPGISAHTNKYIQTGQVDSKFGFDLESGQADRALEAVLASPRMTMIGLHAHIG 210 Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F +++ + Q + I++GGG Sbjct: 211 SQIFELTGFEGVANKLVEVANHWQQRYDYQAQVINVGGGFGIRYTKDDQPLRPEEFVDAI 270 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K I++EPG +IV TV + V + ++ Sbjct: 271 IKAIKAAVASTALEMPAIWIEPGRSIVGPAGYNLYTVGSRKDLPGYRPFVTIDGGMGDNI 330 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E T+ + G+ C +GDI + K GD ++ D Sbjct: 331 RPALYQAEYETVLARDPQAPLAEHVRLAGKYCESGDILSQDQALPKTKPGDVLAMLDTGA 390 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + +N P + + I SY D Sbjct: 391 YGYAMASNYNRNPRPAVVFAENGHSQLVIERESYEDLV 428 >gi|126659265|ref|ZP_01730402.1| diaminopimelate decarboxylase [Cyanothece sp. CCY0110] gi|126619464|gb|EAZ90196.1| diaminopimelate decarboxylase [Cyanothece sp. CCY0110] Length = 464 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 53/402 (13%), Positives = 118/402 (29%), Gaps = 42/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L K +++ A K ++ + + G S Sbjct: 55 GSPLYVLDETTLRTACSQYRDYFKTYYQGESQVIYASKAWSCLAVVGVIATENLGFDVVS 114 Query: 60 LYEV--------MLGH--EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 E+ LG+ ++ + + + + E+ + TII + +L Sbjct: 115 GGELYTTKKSLTRLGYSSQEIAEKIYFHGNNKSEAELKEAIEVGCTIIVDNWLELETLVQ 174 Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLM 162 I +RI P + S+ G + +I + GL Sbjct: 175 L--GQSVPILIRITPGIECHTHEYIRTGHLDSKFGFDPNQLEAVFTYIKKHKIFDCRGLH 232 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL- 218 H + + + + + + +++GGG+ + + Sbjct: 233 AHIGSQIFERQPHQDLAGVLVEWLKIGKEYGLNLSQLNIGGGLGICYTEQDDPPSIEEWV 292 Query: 219 ----------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VE 266 + E Q+ EPG +++ + TV E + + + Sbjct: 293 KAVSEAVMKACKRCEIDLPQLIAEPGRSLIGSACVTAYTVGSRKEIPELRTYIAVDGGMS 352 Query: 267 AHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 + T + G+ C +GDI + GD + Sbjct: 353 DNPRPITYQSLYRVALGNRMSAEINETVTIAGKHCESGDIVIKDAQLPQTHPGDILVIMG 412 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + P + N ++ +Y+D Sbjct: 413 TGAYNYSMASNYNRLPRPAAIIVNQGEANLIVKRETYDDLIQ 454 >gi|257439612|ref|ZP_05615367.1| protein TabA [Faecalibacterium prausnitzii A2-165] gi|257197979|gb|EEU96263.1| protein TabA [Faecalibacterium prausnitzii A2-165] Length = 464 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 61/399 (15%), Positives = 116/399 (29%), Gaps = 35/399 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+++ D++ + N N G + A+K + L + G SSL Sbjct: 52 VPTPFHVYDEKGIRENARRINKAFSWNKGFREYFAVKALPNPIILQILKEEGCGVDCSSL 111 Query: 61 YEVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QK 113 E+ML F G ++ ++ I + + ++ A Sbjct: 112 TELMLSEACGFTGSDIMFSSNQTPVEDMKKAYELGAYINLDDATMVDFLDRVAGIPENIF 171 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNC 167 G S F + D ++ G + I+S K + G+ Sbjct: 172 CRYNPGGTFQLGESEEGFQVMDKPG-DAKYGMTEEQMIDSYKKLMAKGAKNFGIHAFLAS 230 Query: 168 EN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + + + I +I+L GG+ + ++ + E Sbjct: 231 NTISDAYYPELAGILFQLAVRVQKATGAHIGYINLSGGVGIPYRPDQTENDIMAIGEGVR 290 Query: 224 KYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272 + +I + E G L T + K + +D+ + Sbjct: 291 RKFEEILVPAGMGDVAIFTEMGRFTTGPYGALVATAIHEKHIYKEYIGLDACAANLMRPA 350 Query: 273 LLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + + V G C D F + IGD I D + Sbjct: 351 MYGAYHHITVLGKENAPCDHKYDVVGGLCENNDKFAIDRMLPKIDIGDLIYIHDTGAHGS 410 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +NG + DG+ + IR + DY+ L Sbjct: 411 AMGYNYNGKLRSAEVLLCEDGSHRLIRRAETPRDYFATL 449 >gi|296170234|ref|ZP_06851827.1| diaminopimelate decarboxylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895110|gb|EFG74828.1| diaminopimelate decarboxylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 472 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 56/406 (13%), Positives = 124/406 (30%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + G + A K F + +++ S+ E Sbjct: 64 GTPLFVVDEDDFRSRCRELATAFGG-GHNVCYAAKAFLCSEIARWVDEEGLSLDVSTGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E ++ K AV ++ ++++++ + A + + Sbjct: 123 LAVALHAGFPPERITFHGNNKSVAELTSAVKVGVGYVVLDSITEIERLDAIAGEAGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + + ++ + GL H + Sbjct: 183 VYVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMDAVRRVFATDHLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + F + + LGGG+ + L Sbjct: 243 IFDVDGFEVAAHRVIGLLHHIADEFGVDKAGQVSTVDLGGGLGISYLGTDDPPPVAELAA 302 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 + ++ +EPG AI T V + + + V VD Sbjct: 303 KLTAIVGSESAAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSSIAQRRYVSVDG 362 Query: 264 SVEAHVPDYLL---YQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L Y + P T A + G+ C GDI + ++ GD + Sbjct: 363 GMSDNIRTALYDAQYDARLVSRASDAPATLARIVGKHCETGDIVVRDTWVPDDLRPGDLL 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N I P + + +R + +D + Sbjct: 423 AVAATGAYCYSLSSRYNMICRPAVVAVRDGRSRLILRRETVDDLLS 468 >gi|87303422|ref|ZP_01086210.1| diaminopimelate decarboxylase [Synechococcus sp. WH 5701] gi|87282070|gb|EAQ74032.1| diaminopimelate decarboxylase [Synechococcus sp. WH 5701] Length = 474 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 53/395 (13%), Positives = 112/395 (28%), Gaps = 34/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKL-LLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ L + G L L A K ++ + + G + S Sbjct: 67 GTPLYVLDEATLRASCRAYQEALAAHYPGPSLALYASKANSSLVLSALVASEGLGLDAVS 126 Query: 60 LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E++ + E + D E+ +++ T++ + L + + A + Sbjct: 127 AGELLTALQGGMPPERIVLHGNNKSDEELSLAVAHGVTVVVDNDHDLERLAEIAPAAGRV 186 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE 168 + LR P + S+ G + GL H + Sbjct: 187 VPLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLESVLQRLAGCSWARLTGLHAHIGSQ 246 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------- 218 + + + +++GGG+ Q Sbjct: 247 IFELQPHRDLAGVMADALALARSLGHPVSDLNVGGGLGIRYVASDDPPTIQEWVKGVAEA 306 Query: 219 ----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272 + ++ EPG ++V T+ + + + VD + + Sbjct: 307 VVRACRERDLELPRLLCEPGRSLVATAGLTVYTIGSRKQIPGLRTYLSVDGGMSDNPRPI 366 Query: 273 LLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + T V G+ C +GD+ + P GD + YN Sbjct: 367 TYQSSYTAVLAERPTAVATETVTVAGKHCESGDVLLKDLALPPSSSGDLLVVFATGAYNA 426 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + +N I P + + R ++ Sbjct: 427 SMASNYNRIPRPAAVLVHGGQAELVQRRERPDELL 461 >gi|329906987|ref|ZP_08274530.1| Diaminopimelate decarboxylase [Oxalobacteraceae bacterium IMCC9480] gi|327547120|gb|EGF31991.1| Diaminopimelate decarboxylase [Oxalobacteraceae bacterium IMCC9480] Length = 368 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 111/362 (30%), Gaps = 31/362 (8%) Query: 33 LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAV 89 ++K + + L+Q G S E++ E ++ +D A+ Sbjct: 2 CYSVKSNSNLAVLHLLSQLGSGFDIVSSGELLRVLAAGGNPEKVIFSGVGKTRDEMQLAL 61 Query: 90 LSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC 147 + S+L++ A +L I LR+NP+V ++ G Sbjct: 62 SHGIACFNVESTSELHRLSAVAVDMQLTASISLRVNPNVDAKTHPYISTGLKENKFGVAI 121 Query: 148 KDKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLKNIE---KEFGHFITQIEWIS 197 +D + V G+ H + L + I + Sbjct: 122 EDALMIYRTAAGLPGIRVVGIDCHIGSQLLDDAPLLEALDKLIELIDVLAAEGIVIHHLD 181 Query: 198 LGGGIHFTDKDYPVKDFCQRLK--------EFSEKYSVQIY---LEPGEAIVTNTTTLNT 246 +GGG+ + L +EKY EPG +IV N L T Sbjct: 182 IGGGLGIDYEAEVPVAVGDYLTRLFRKIDLWRAEKYQGVPIKVLFEPGRSIVGNAGVLLT 241 Query: 247 TVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDI 302 V + + KN IVD+++ + + A + V G C +GD Sbjct: 242 RVEYLKPGSEKNFAIVDAAMNDLMRPAMYQAWHGVQAVVQRGGEAIVWDVVGPVCESGDW 301 Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 ++ GD ++ Y + + +N + + + + + + Sbjct: 302 LARARTLS-LEEGDLLAIHSAGAYGMTMSSNYNTRGRAAEVMVDGNVSHLIRQRETPEQL 360 Query: 363 YN 364 + Sbjct: 361 FA 362 >gi|109947141|ref|YP_664369.1| hypothetical protein Hac_0550 [Helicobacter acinonychis str. Sheeba] gi|109714362|emb|CAJ99370.1| lysA [Helicobacter acinonychis str. Sheeba] Length = 405 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 124/385 (32%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+Y D K+ + K + ALK + + L G SL E Sbjct: 12 KTPFYFYDFDKIKQAFLSYKEAFKGRKSLICYALKANSNLSILSLLASLESGADCVSLGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G + K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVEEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + K + + +GGGI + ++ D+ Q + + + Sbjct: 192 DLEPIIEASQKVAKTAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILDSLQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHEIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + +K GD+++ E V Y + + +N Sbjct: 312 TPRKGGKVSPCDVVGPVCESSDTFLKEVNLPELKPGDKLAIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 ++ S D + Sbjct: 372 LLELALEDHKIRVIRKKESLEDLWR 396 >gi|116617779|ref|YP_818150.1| diaminopimelate decarboxylase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096626|gb|ABJ61777.1| diaminopimelate decarboxylase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 430 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 65/395 (16%), Positives = 119/395 (30%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D + + I + V + A K FA ++ Q S Sbjct: 26 GTPLAVYDVTLIRKTMRAFKRIFEQENVPYVVSYAGKAFATKAIYQVAAQENIHADVVSG 85 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + ++N K D + AV + TII + +L + + + Sbjct: 86 GELYTAIKADFPTQHLSFNGNNKSYDELVMAVENGVGTIIVDNFLELQLLSEITAEKNVI 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + I LRI+P +S + S+ G + I+ ++ GL H Sbjct: 146 QDILLRISPGISAHTHEFISTGQQDSKFGFDLQTGQAKQAYDIAIKDNHLHLRGLHAHIG 205 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE------ 220 + F + + Q E I+ GGG D + Sbjct: 206 SQIFDVTGFEKNAALLADTAYSWGWQPEVINTGGGFGIRYTDEDQPLPENEFADAIIRVL 265 Query: 221 -----FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273 + +I++EPG +IV TV + VD + ++ L Sbjct: 266 KEKATQYDWAMPEIWIEPGRSIVGPAGQTLYTVGSRKDIPGIRNYLAVDGGMGDNIRPAL 325 Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + N + G+ C +GD+ K GD +S Y Sbjct: 326 YQANYEAVLANQPNAKSEEIVRIAGKYCESGDVLVWQEELPATKPGDILSVLATGAYGYA 385 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + + ++ + Sbjct: 386 MASNYNRNPRPAVVFVENGQHQVVVERETFEHMIS 420 >gi|300727749|ref|ZP_07061135.1| diaminopimelate decarboxylase [Prevotella bryantii B14] gi|299775037|gb|EFI71643.1| diaminopimelate decarboxylase [Prevotella bryantii B14] Length = 385 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 72/365 (19%), Positives = 124/365 (33%), Gaps = 26/365 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I+TP+Y D L + L K+ + A+K A + + + Q G S Sbjct: 13 IRTPFYYYDTNILRDTLKAIKSETDKHEHFMVHYAIKANANPKVLNIICQAGLGVDCVSG 72 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116 E+ E F + K + + D FN ++ +L AQ+ K Sbjct: 73 GEIERALEVGFPANKIVFAGVGKSDWEIELAIDKDIFCFNVESIPELEVINQIAQEKGKI 132 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168 + RINP+V ++ G ++ + GL FH + Sbjct: 133 AHVAFRINPNVGAHTHANITTGLAENKFGIAMCDMLTVIEEAKNMKNVKFVGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218 F + ++ ++E I++GGG+ + F Sbjct: 193 ILDMGDFEALCNRINELQDTLERNNIKVEHINVGGGLGIDYEHPNQSPIPDFKSYFETYS 252 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--Y 275 K + Q++ E G A+V TL T L + + + K IVD+ + + L Y Sbjct: 253 KFLKLRNGQQVHFELGRAVVGQMGTLITKTLYVKQGSAKKFAIVDAGMTDLIRPALYQAY 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + I N V G C + D+F + + GD I+ Y + +N Sbjct: 313 HKIENISSNAPTEAYDVVGPICESSDVFAKSIDLNKCQRGDLIAIRSAGAYGEIMASQYN 372 Query: 336 GINMP 340 MP Sbjct: 373 CRKMP 377 >gi|153808224|ref|ZP_01960892.1| hypothetical protein BACCAC_02512 [Bacteroides caccae ATCC 43185] gi|149129127|gb|EDM20343.1| hypothetical protein BACCAC_02512 [Bacteroides caccae ATCC 43185] Length = 386 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 125/367 (34%), Gaps = 28/367 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + K + A+K A + + + G S Sbjct: 13 LQTPFYYYDTKVLRDTLSAINQEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + K + FN ++ +L + A Q Sbjct: 73 GEIRAAIRAGFPASKIVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKI 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP V ++ G +D +E + GL FH + Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAVEMKHVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F+ + ++ + +E I++GGG+ +P + K++ Y Sbjct: 193 ILDMGDFIALCNRVNELQDKLEARRILVEHINVGGGLGIDYG-HPNRQPIPNFKDYFSTY 251 Query: 226 --------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL-- 274 ++ E G A+V +L + VL + + K + D+ + + L Sbjct: 252 AGQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGAKKKFAILDAGMTDLIRPALYQA 311 Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 Y + I + V G C + D+FG+ VK GD I+ Y + + Sbjct: 312 YHKMENITSEEPVESYDVVGPICESSDVFGKVIDLNKVKRGDLIALRSAGAYGEIMASGY 371 Query: 335 NGINMPT 341 N +P Sbjct: 372 NCRELPK 378 >gi|297192060|ref|ZP_06909458.1| diaminopimelate decarboxylase [Streptomyces pristinaespiralis ATCC 25486] gi|197719490|gb|EDY63398.1| diaminopimelate decarboxylase [Streptomyces pristinaespiralis ATCC 25486] Length = 463 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 120/398 (30%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D+ + A K F + + L + S E Sbjct: 63 GTPAYFLDEADFRARCRAWAAAFGK-DADVFYAGKAFLSRAIVRWLKEEGLNLDVCSGGE 121 Query: 63 VMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E A++ K + AV + I+ ++ ++ + AQ+ K+ Sbjct: 122 LATALAAGMPAERIAFHGNNKSVEEIERAVEAGVGRIVLDSFQEIVRVAHIAQRAGKRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 +R+ V + G + ++ + + G+ H + Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRRALKLDGLELIGIHSHIGSQ 241 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +++ + + ++ I LGGG+ + + + Sbjct: 242 IFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKSLTE 301 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 +I +EPG AIV T V + + V VD + ++ Sbjct: 302 IVTRECEAAGLRPPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + + A V G+ C +GDI + F + GD I+ Y Sbjct: 362 ALYDAEYSVALVSRTSEAAPMLSRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D Sbjct: 422 CRSMASNYNHALRPPVVAVADGEARVIVRRETEEDLLR 459 >gi|34499212|ref|NP_903427.1| diaminopimelate decarboxylase [Chromobacterium violaceum ATCC 12472] gi|34105063|gb|AAQ61419.1| diaminopimelate decarboxylase [Chromobacterium violaceum ATCC 12472] Length = 409 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 118/398 (29%), Gaps = 44/398 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + + + A K + + + + SL E Sbjct: 17 GTPLWVYRADTIRERIAELK-AFD----TIRYAQKANSNTHILRLMRAEGVKVDAVSLGE 71 Query: 63 VMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + + D A + + + ++ L + + A Sbjct: 72 IERALAAGYRGGGEPSDIVFTADVLDRPTLAKVIAENIPVNAGSIDMLRQLGEAA--PGH 129 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENK 170 + LRINP + + S+ G + + G+ H Sbjct: 130 PVWLRINPGFGHGHSQKTNTGGENSKHGIWHGDLDEALQAVRRFNLRLIGIHMHIGSGVD 189 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + + + + IE IS GGG+ Y R + Sbjct: 190 -YGHLEQVCGAMVELVARLECDIEAISAGGGLSIPYRDGDARIDTAHYFQLWDAARRRIE 248 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES- 278 + + VQ+ +EPG +V L + V + + ++ V+VD+ + L Sbjct: 249 AHLGHPVQLEIEPGRFLVAEAGALLSEVRAVKNMGSRHFVLVDAGFNDLMRPSLYGSYHR 308 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 A TG +V G C +GD+F E P ++GD + F D Y Sbjct: 309 ISLLDADGAEKTGAVDTVVAGPLCESGDVFTQQEGGTVETRPLPPAQVGDLMVFHDAGAY 368 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + A+ + + R + + Sbjct: 369 GATMSSNYNSRPLLAEALVDGGAVRQIRRRQTIAELLA 406 >gi|198275986|ref|ZP_03208517.1| hypothetical protein BACPLE_02169 [Bacteroides plebeius DSM 17135] gi|198271615|gb|EDY95885.1| hypothetical protein BACPLE_02169 [Bacteroides plebeius DSM 17135] Length = 386 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 75/366 (20%), Positives = 126/366 (34%), Gaps = 28/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D L L+ K + A+K A + + + G S Sbjct: 13 LETPFYYYDTNLLRETLNKIKEEAGKYNKFCVHYAVKANANPKVLGIIRESGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKK 117 E+ F Y K + + + D FN ++ +L + A +K Sbjct: 73 GEIKAAIKAGFPASKIVYAGVGKTDKEINLGLDYDIFCFNVESIPELEVINELAAAKNKI 132 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 RINP V ++ G +D +E + GL FH + Sbjct: 133 ARVAFRINPDVGAHTHANITTGLAENKFGISIQDMDRVIDLALEMKNVKFVGLHFHIGSQ 192 Query: 169 NKSFLCFSAML----KNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEF 221 F A+ + EK F I +E I++GGG+ P+ DF + + Sbjct: 193 ILDMGDFVALCNRVNELQEKLFARQII-VEHINVGGGLGIDYAHPNRQPIPDFAEYFATY 251 Query: 222 SEKY----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL-- 274 + ++ E G A+V +L T V + + K IVD + + L Sbjct: 252 HKHLRLRPQQTLHFELGRAVVGQCGSLITKVTYVKQGTNKQFAIVDGGMTDLIRPALYQA 311 Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 Y + + T V G C + D+FG+ V GD I+ Y + + Sbjct: 312 YHKIENLTSEEPVETYDVVGPICESSDVFGKAIDLNKVHRGDLIALRSAGAYGEIMASGY 371 Query: 335 NGINMP 340 N +P Sbjct: 372 NCRPLP 377 >gi|299140571|ref|ZP_07033709.1| diaminopimelate decarboxylase [Prevotella oris C735] gi|298577537|gb|EFI49405.1| diaminopimelate decarboxylase [Prevotella oris C735] Length = 386 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 121/366 (33%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+Y D + L L K++ + A+K A + +++ G S Sbjct: 14 LSTPFYYYDTELLRRTLTEIKTEANKHSNYIVHYAIKANANTKLLKIIHEAGLGADCVSG 73 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116 E+ E F Y K + + + FN ++ +L + A K Sbjct: 74 GEIKAALEAGFPASEIVYAGVGKSDWEINLGLDNEIFCFNVESIPELEVINELAGTKGKV 133 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP V ++ G +D + + GL FH + Sbjct: 134 ANVAFRINPDVGAHTHSNITTGLAENKFGIAMRDIDSIINRALHMKHVKFIGLHFHIGSQ 193 Query: 169 NKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------RL 218 F+ + +++ + + I++GGG+ + Sbjct: 194 ILDMSDFVALCRRINDLQNQLEKHGISVRHINVGGGLGIDYEHPDKSAIPDFKAYFDTYA 253 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLY-- 275 K ++ Q++ E G A+V +L T L + + + K IVD+ + + L Sbjct: 254 KYLKLRHGQQLHFELGRAVVGQCGSLITRTLYVKQGDTKQFAIVDAGMTELIRPALYQAV 313 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + I N V G C D+F + GD ++ Y + +N Sbjct: 314 HKIENISSNRSTEIYDVVGPICETSDVFAKDVLLNKTYRGDLLAIRSAGAYGEIMASQYN 373 Query: 336 GINMPT 341 +P Sbjct: 374 CRKLPK 379 >gi|330827982|ref|YP_004390934.1| diaminopimelate decarboxylase [Aeromonas veronii B565] gi|328803118|gb|AEB48317.1| Diaminopimelate decarboxylase [Aeromonas veronii B565] Length = 416 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 111/385 (28%), Gaps = 24/385 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + + A+K + + + L + G S E Sbjct: 27 GTPLYVYSRATLERHWHAFDKAAGDIPHLICYAVKANSNLALLNLLARLGSGFDIVSGGE 86 Query: 63 V--MLGHEKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + +L + VA + E+ A+ + ++L + A + KK Sbjct: 87 LSRVLAAGGDPAKVVFSGVAKSEAEMRLALEKEILCFNLESEAELERLNRVAGNMGKKAR 146 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170 +R+NP + ++ G + + G+ H + Sbjct: 147 VSVRVNPDIDAGTHPYISTGLKQNKFGIPIELAPAIYRKAAAMANIEIVGVDCHIGSQLT 206 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224 F + I + +GGG+ + + LK+ Sbjct: 207 ELNPFMEAADKLLRLIDGLAAEGIHIHHLDVGGGLGVNYGSEQPPHPTEYAEALKQKLAG 266 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283 + + EPG AIV N L T V + +D+ + + L I Sbjct: 267 RDLTLLFEPGRAIVANAGVLLTRVEYLKPGETRNFALIDAGMNDMLRPSLYGAWMNIIEV 326 Query: 284 NT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 ++ P V G C GD G+ + G ++ Y + +N Sbjct: 327 DSRAGHAPAIYDVVGPVCETGDFLGKERTLA-IAEGSLLAVRSAGAYGFTMSSNYNTRPR 385 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 386 AAEVLVDGAEAHLIREREQLADLWR 410 >gi|284164081|ref|YP_003402360.1| diaminopimelate decarboxylase [Haloterrigena turkmenica DSM 5511] gi|284013736|gb|ADB59687.1| diaminopimelate decarboxylase [Haloterrigena turkmenica DSM 5511] Length = 466 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 62/408 (15%), Positives = 127/408 (31%), Gaps = 54/408 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y +D +++ N +++ A+K A + +TL++ G +S E Sbjct: 29 GSPLYALDLERVRENYRRLASAF--PDAEIMYAVKANALDEVLETLHEEGAGLECASAGE 86 Query: 63 VMLGHE---------KFGGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLNKFK 108 V G + H V ++D V+ + TI +++ + Sbjct: 87 VKRALAAIESSDRSDGSGADVHYTAVNPPARDLDWVVDAWEDHPELTITVGAEDTIDRLE 146 Query: 109 DKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLM 162 ++ ++ LR+NP + ++ G + ++ +V G+ Sbjct: 147 ER--GYDGRLCLRVNPGIDAGHHEKV-KTGAAAKFGVPIERAVDVLTNAADRGFDVVGVH 203 Query: 163 FHNNCENKSFL------CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVK 212 H S + M + +E++ +GGG ++ Sbjct: 204 AHVGSGVSSDQLDDHRAFVARMGELATDVDEALEGDLEFVDVGGGFGVPYRESEAPLDLE 263 Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPD 271 + +E ++ +EPG V + L T V I E V VD+ + + Sbjct: 264 AVAEATREALGDVDARLTIEPGRYFVADAGVLLTEVNTIKEARDTLAVGVDAGMTTLLRP 323 Query: 272 YLLYQESATIYPNTGPY------------------TAMVCGRSCLAGDIFGEFHFEKPVK 313 + + G C +GD+F + Sbjct: 324 AMYDAYHPIRNLTADREADSSDETRNSADTGRETVPQTIAGPICESGDVFCSDRELPASR 383 Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 D ++ + Y N +N P V + D A R + +D Sbjct: 384 RTDVLAIGNAGAYGYEMANQYNSRPRPASVVIDGDDVRLARRRETVDD 431 >gi|282896303|ref|ZP_06304325.1| Diaminopimelate decarboxylase [Raphidiopsis brookii D9] gi|281198799|gb|EFA73678.1| Diaminopimelate decarboxylase [Raphidiopsis brookii D9] Length = 464 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 44/400 (11%), Positives = 109/400 (27%), Gaps = 38/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ + ++L A K + + + G S Sbjct: 56 GSPLYILDELTVRTACQQYRDAFTKYYKGHSQVLYASKAWNCLAVCAIVASEGLGIDVVS 115 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117 E+ + + K I+ + +L ++ + Sbjct: 116 GGELYTALTAGMSPDKIYLHGNNKSHHELMFAVETGCTIVVDNWYELRTLVAILEQDEQD 175 Query: 118 IG------LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFH 164 LR+ P + S+ G D + + G+ H Sbjct: 176 QAKKIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLPEVFSFVSQQSRLHCVGVHAH 235 Query: 165 NNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD-------- 213 + + + + + ++ +++GGG+ + Sbjct: 236 IGSQIFERQPHRDLAAVMVQWLREAKQYNLELAELNVGGGLGIKYTESDDPPSIEEWSRA 295 Query: 214 FCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 C+ ++ + + ++ EPG +++ T+ V + + Sbjct: 296 ICEVVQNVCAEENLPLPKLLCEPGRSLIATGGVTAYTIGSTKTIPDIRTYVTIDGGMSDN 355 Query: 269 VPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + N T + G+ C +GDI + + GD + Sbjct: 356 PRPITYQSVYRAVVANKMSAPLTETVTLAGKHCESGDILIKNVQLPKTEPGDVLVVMTTG 415 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + P + ++ +Y D Sbjct: 416 AYNYSMASNYNRLPRPAAVLVANGEANLILQRETYQDIIR 455 >gi|302558388|ref|ZP_07310730.1| diaminopimelate decarboxylase [Streptomyces griseoflavus Tu4000] gi|302476006|gb|EFL39099.1| diaminopimelate decarboxylase [Streptomyces griseoflavus Tu4000] Length = 463 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 118/398 (29%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +D+ + + + A K F + + L++ S E Sbjct: 63 GTPAYFLDEDDFRARARSWRTAFGD-DADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E A++ K D AV + I+ ++ ++ + AQ+L + Sbjct: 122 LATALSAGMPAERIAFHGNNKSTDEIRRAVEAGVGRIVLDSFQEIVRVAHIAQELGTRQR 181 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 +RI V + G + + + + G+ H + Sbjct: 182 VQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALTLDGLELIGIHSHIGSQ 241 Query: 169 NKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F + ++ I LGGG+ + + + Sbjct: 242 IFDMSGFEVAAHRVVGLLRDIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALTE 301 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG AIV T V + + V VD + ++ Sbjct: 302 IVTRECDAARLATPRISVEPGRAIVGPTAFTLYEVGTVKPLDGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E A+ P V G+ C +GDI + F + GD I+ Y Sbjct: 362 ALYDAEYSVALASRVSEAEPMLCRVVGKHCESGDIVVKDAFLPGDLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + +R + D Sbjct: 422 CRSMASNYNHVVRPPVVAVRDGEARVIVRRETEEDLLR 459 >gi|210612474|ref|ZP_03289332.1| hypothetical protein CLONEX_01533 [Clostridium nexile DSM 1787] gi|210151582|gb|EEA82589.1| hypothetical protein CLONEX_01533 [Clostridium nexile DSM 1787] Length = 428 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 65/391 (16%), Positives = 120/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N+ N G K A+K + + L +Y G SS Sbjct: 26 PTPFHLYDERGIRENVKALKEAFAWNKGYKEYFAVKATPNPFLINILREYGCGCDCSSYT 85 Query: 62 EVML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML G + + A E I + + + ++ + + I Sbjct: 86 ELMLSEALGAVGKDIMFSSNATPAEEFVYADKLGAIINLDDFTHIEFLENAIGHIPETIS 145 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N ++ G + ++++ GL Sbjct: 146 CRYNPGGLFKISNDIMDNPGDAKYGMTTEQLFEAFKILKAKGAKEFGLHAFLASNTVTNE 205 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + K I++I+L GGI + + + + E K + Sbjct: 206 YYPMLAKILFEVAVKLQKETGAHIKFINLSGGIGIPYRPDQEPNDIRAIGEGVRKVYEEV 265 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + K + D+ + + Sbjct: 266 LVPAGMGDVAIYTELGRYMMGPYGCLVTKAVHEKHTYKEYIGCDACAVNLMRPAMYGAYH 325 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + G C D F + IGD + D + + Sbjct: 326 HITVMGKEDAPCDHKYDITGSLCENNDKFAVDRMLPKIDIGDLLVIHDTGAHGFAMGYNY 385 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DGT K IR + DY+ Sbjct: 386 NGKLKSAEILLQEDGTPKLIRRAETPADYFA 416 >gi|238923829|ref|YP_002937345.1| diaminopimelate decarboxylase [Eubacterium rectale ATCC 33656] gi|238875504|gb|ACR75211.1| diaminopimelate decarboxylase [Eubacterium rectale ATCC 33656] gi|291524569|emb|CBK90156.1| Diaminopimelate decarboxylase [Eubacterium rectale DSM 17629] gi|291527996|emb|CBK93582.1| Diaminopimelate decarboxylase [Eubacterium rectale M104/1] Length = 422 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 118/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+ + N N G + A+K + L Y G SS Sbjct: 20 PTPFHLYDEAGIRANAQAVKDAFAWNPGFREYFAVKATPNPYLLKILKDYDMGCDCSSYT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML F GE ++ E I + + ++ ++ + + I Sbjct: 80 ELMLAKSCGFDGEHIMFSSNDTPAEEFAYADKLGAIINLDDFTHIDFLEETIGHIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP ++ N S+ G + ++S+ G+ Sbjct: 140 CRYNPGGVFTLSNGIMDNPGDSKYGMTKEQLFEAFKILKSKGAKYFGVHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + + I +++L GG+ K + + K + Sbjct: 200 YYPQLAKELFELVVELKNETGCDIRFVNLSGGVGVAYKPDQTPNDISVIGAGVHKVYDEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + K + VD+ + + Sbjct: 260 LVPAGMGDVAIYTEMGRFMMAPYGCLVTKAIHEKHIYKEYIGVDACAANLMRPAIYGSYH 319 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 +T V G C D F + +GD + D + + + Sbjct: 320 HITVLGKEDAPCDHTYDVVGSLCENCDKFAIDRQLPKIDMGDYLVIHDTGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + +G K IR + DY+ Sbjct: 380 NGRLRSAEILLESNGEAKLIRRAETPADYFA 410 >gi|281357096|ref|ZP_06243586.1| diaminopimelate decarboxylase [Victivallis vadensis ATCC BAA-548] gi|281316654|gb|EFB00678.1| diaminopimelate decarboxylase [Victivallis vadensis ATCC BAA-548] Length = 406 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 70/383 (18%), Positives = 120/383 (31%), Gaps = 25/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D ++ +K+ ALK G+ L G + S E Sbjct: 15 GTPLYVYDGDLVVERYRDLFKFIPYDRLKIHYALKANYNPGLLTLLRDAGAGLDTVSPGE 74 Query: 63 VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V+ + F E Y D E + VL+ + ++S+L K Q K+ L Sbjct: 75 VVYALKLGFPRERIIYTANNMTDAEFEQVLAMDVVMNIGSLSRLRKIAK--QHPGMKLCL 132 Query: 121 RINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 R NP V ++ G E+ K ++ V GL H + Sbjct: 133 RFNPDVCDGDNEKTMTGGDLTKFGILLESVEEVKALVKEGNLRVIGLHEHTGSGLQHAES 192 Query: 175 FSAMLK-NIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKYSVQ- 228 + + +E++ GGG K + ++ + Sbjct: 193 VYQSMDNLMAIATPENFPNLEFLDFGGGFKVPYKPEERRVDYVAMGAEIARRFTAFTERY 252 Query: 229 -----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIY 282 + EPG+ +V L T V I N ++ S + L Sbjct: 253 GRRLDMLFEPGKYMVAEAGHLLTEVNTIKCNRTRVIAGCDSGFPQLIRPVLYGAYHQIRN 312 Query: 283 PNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + P VCG C GD F E ++ D ++ + Y + +N M Sbjct: 313 LSNPAGKPVVYDVCGNICETGDRFAEQRELPEIREYDILAVGNAGAYCYSMGGVYNLRPM 372 Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362 P V + + R+ + + Sbjct: 373 PGEIVVSGGKVVSERRKLTTEEL 395 >gi|319892399|ref|YP_004149274.1| Diaminopimelate decarboxylase [Staphylococcus pseudintermedius HKU10-03] gi|317162095|gb|ADV05638.1| Diaminopimelate decarboxylase [Staphylococcus pseudintermedius HKU10-03] Length = 421 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 64/394 (16%), Positives = 121/394 (30%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + + G L A K F M + S Sbjct: 26 GTPTIVYDEAQIRQQMRRYHSAFQQNDIGYVLSYASKAFTCLQMVKLAAEEDFELDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F + ++ K S + + + +++ + A K Sbjct: 86 GELYTALEAGFDPQRIHFHGNNKTKHEIRYALESGIGYFVVDALDEIDLIEQYATKPVD- 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G E + + + G+ FH + Sbjct: 145 VLLRVNPGVEAHTHEFIQTGQEKSKFGLSLKHGLALEAVEKIRNTNNIVLKGIHFHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR--------LKE 220 + K + I+ ++LGGG + + +K Sbjct: 205 IEETTGMIETAKMVLNWLDEHAITIDLLNLGGGFSAQYVEGDQSFDIEAGITEIVQAIKA 264 Query: 221 FSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 ++ I +EPG +IV V I + V + H+ L Sbjct: 265 ECQQLKYPIPTLSIEPGRSIVAEAGVTLYEVGTIKDIPGVNKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ T T + G+ C +GDI VK GD ++ Y+ + Sbjct: 325 AKYQALLINRNETPDETVTIAGKLCESGDIIIHEAKLPSSVKRGDYLAILATGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + ++ S N Sbjct: 385 SNYNQMQKPSVFFVKDGKAREVVKRQSLRQLIIN 418 >gi|317503132|ref|ZP_07961202.1| diaminopimelate decarboxylase [Prevotella salivae DSM 15606] gi|315665748|gb|EFV05345.1| diaminopimelate decarboxylase [Prevotella salivae DSM 15606] Length = 385 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 72/371 (19%), Positives = 126/371 (33%), Gaps = 26/371 (7%) Query: 3 KTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y D + L L T K+ G + A+K A + + + G S Sbjct: 15 PTPFYYYDTKLLQATLHTISTEAVKHKGFHVHYAVKANANPTLLRMIQEAGLGADCVSGG 74 Query: 62 EVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK-- 116 E+ F Y K+ + + D FN ++ +L A K Sbjct: 75 EIKASIAAGFKPSQIVYAGVGKNDWEINLGLDQDIFCFNVESLPELEVINQLAACKSKIA 134 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169 I LRINP++ ++ G + + + + GL FH + Sbjct: 135 HIALRINPNIGAHTHSNIVTGLAENKFGIAMHDMHDLIERATKMKNVKLIGLHFHIGSQI 194 Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKE 220 F + K I + + +E I++GGG+ + K + Sbjct: 195 LDMTDFIKLCKRINELQDQLAEHGITLEHINVGGGLGIDYEHPQAHSIPDFKTYFDTFDT 254 Query: 221 FSEKYSVQ-IYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES 278 + Y Q I+ E G ++V +L T VL + + K VIVD+ + + L + Sbjct: 255 HLKHYPQQQIHFELGRSVVGQCGSLITRVLYVKKGTNKQFVIVDAGMTELIRPALYHATH 314 Query: 279 A--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + T V G C + D+F + + GD ++ Y + +N Sbjct: 315 HIENLNSTMEEETYDVVGPICESSDVFAKDIQLNKTQRGDLLAIRSAGAYGEIMASGYNC 374 Query: 337 INMPTIAVKNV 347 +P N Sbjct: 375 RELPKSYFTND 385 >gi|85707825|ref|ZP_01038891.1| Orn/DAP/Arg decarboxylase, family 2 [Erythrobacter sp. NAP1] gi|85689359|gb|EAQ29362.1| Orn/DAP/Arg decarboxylase, family 2 [Erythrobacter sp. NAP1] Length = 419 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 56/375 (14%), Positives = 100/375 (26%), Gaps = 23/375 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP Y+ + L + + A+K + L++ G S+ Sbjct: 25 VGTPVYVYSRATLERHARVFREALDAVPDKLIAFAVKSNPNLAVLKVLSREGYGADVVSV 84 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN----TVSQLNKFKDKAQKLH 115 E+ E ++ K FN Sbjct: 85 GEMRRALAAGMPPEKIVFSGVGKTRAELQAALEAGIGQFNIESEEEGLELAELAAEMGRE 144 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + LRINP V + ++ G E + G+ H + Sbjct: 145 AQCALRINPDVDAGTHDKISTGKADNKFGVPISQAGQIFGKLAGQEGVRLRGVAVHIGSQ 204 Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221 + I + LGGG+ + ++ + Sbjct: 205 LGELAPLERAFTKLGELVTSLRGAGHTITHVDLGGGLGVPYRAGEELPSPAEYGAMVARV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 ++ + V + EPG I N L T V+ + VIVD+++ L Sbjct: 265 TKDWGVSLIFEPGRVIAGNAGVLLTRVVRVKRGIKDPFVIVDAAMNDLARPALYGAYHDF 324 Query: 281 IYPNT--GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + TA + G C GD F ++ GD F Y + +N Sbjct: 325 VAVQPRGSDMTANIVGPICETGDTFAMGRLTDKLESGDLAVFRTAGAYGATMASSYNSRG 384 Query: 339 MPTIAVKNVDGTIKA 353 + + D Sbjct: 385 FVAEVLVDGDKFAVV 399 >gi|330815285|ref|YP_004358990.1| Diaminopimelate decarboxylase [Burkholderia gladioli BSR3] gi|327367678|gb|AEA59034.1| Diaminopimelate decarboxylase [Burkholderia gladioli BSR3] Length = 423 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 117/387 (30%), Gaps = 27/387 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + +A+K + G+ + + G S E Sbjct: 28 DTPLYVYSRAALTAAYQAYAQACEGRRAAIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + E ++ K + A+ + ++ +L++ + A L Sbjct: 88 LARVLAAGGKAENVVFSGVGKSAEEMRVALQAGVKCFNVESIPELDRLDEVAGSLGKRAP 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170 + LR+NP V ++ G + S V G+ H + Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGVAFAEARASYRAAAALPNLQVVGIDCHIGSQIT 207 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + L ++ ++ I + +GGG+ T D + + + Sbjct: 208 ELSPYLDALDKVLDLVEQIEADGIPIHHVDIGGGLGITYADETPPAIGEFVAALFARLDA 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280 ++Y EPG ++ N L T V + KN IVD+++ + A Sbjct: 268 RGHGQREVYFEPGRSLTGNAGILLTRVEFLKPGEEKNFAIVDAAMNDLARPAMYEAYHAI 327 Query: 281 IYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + V G C +GD G + G+ ++ Y + +N Sbjct: 328 VPVKEQSGHASAVYDVVGPVCESGDWLGRERTLA-IAPGELLAIRSAGAYGFVMSSNYNT 386 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYY 363 + + + + Sbjct: 387 RARAAEVLVDGVNAYLVRPRETIESLF 413 >gi|226322592|ref|ZP_03798110.1| hypothetical protein COPCOM_00364 [Coprococcus comes ATCC 27758] gi|225208929|gb|EEG91283.1| hypothetical protein COPCOM_00364 [Coprococcus comes ATCC 27758] Length = 436 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 65/391 (16%), Positives = 124/391 (31%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N+ N G K A+K + + L +Y G SS Sbjct: 23 PTPFHLYDEKGIRENVKALKEAFAWNKGYKEYFAVKATPNPYILNILKEYGCGCDCSSYT 82 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ GE ++ E A I + ++ ++ + K+ + I Sbjct: 83 ELLMSESVGQVGENIMFSSNDTPAEEFALADKLGAIINLDDITHIDFLEKTIGKIPETIS 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N ++ G + ++S+ G+ Sbjct: 143 CRYNPGGLFKISNSIMDNPGDAKYGMTTEQIFEAFKILKSKGAKEFGIHAFLASNTVTNE 202 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + K I++I+L GG+ K + + + E K + Sbjct: 203 YYPTLARTLFEVAVKLQKETGVHIKFINLSGGVGIPYKPDQEPNDIKVIGEGVRKVYEEV 262 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + K + VD+ + + Sbjct: 263 LVPAGMGDVAIYTELGRFMLGPYGCLVTKAIHEKHTHKEYIGVDACAANLMRPAMYGAYH 322 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 +T V G C D F + +GD + D + + + Sbjct: 323 HITVMGKENEPCDHTYDVTGSLCENNDKFAIDRQLPKIDMGDLLVIHDTGAHGFSMGYNY 382 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG + IR + DY+ Sbjct: 383 NGRLRSAEVLLKEDGGTQLIRRAETPMDYFA 413 >gi|332297300|ref|YP_004439222.1| Diaminopimelate decarboxylase [Treponema brennaborense DSM 12168] gi|332180403|gb|AEE16091.1| Diaminopimelate decarboxylase [Treponema brennaborense DSM 12168] Length = 422 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 64/392 (16%), Positives = 114/392 (29%), Gaps = 28/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ D++ + N+ K A+K + L G SSL Sbjct: 21 GTPFYIYDERAIRENMRRFTKAFGIFPSFKEYFAVKACPNPYILKILASEGAGADCSSLP 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E++L GE + + + +I + +KA ++ Sbjct: 81 ELILAEKAGMSGENVMFTSNETPEKEYIYANLKGNVINLDDISHIAYLEKALGALPELLC 140 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLC 174 + ++ G + E+ N GL + Sbjct: 141 FRYNPGPLKEGNALIGKPEEAKYGLTREQIFEAYRVCKNKGVKRFGLHTMVASNELNPDY 200 Query: 175 FSAMLKN----IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 F + + +IE++ LGGGI K + QR++ ++ Sbjct: 201 FVETAELLFTLAAELKRKEGVRIEFVDLGGGIGIPYRPGQKAVDYEYVAQRIRAAYDEII 260 Query: 227 VQ-------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 V + E G I L T L ++ V VD+S+ + + Sbjct: 261 VPAGLDPLAVAWECGRPITGPYGWLVTRALHEKHIYRDYVGVDASMADLMRPGMYGAYHE 320 Query: 280 TIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 V G C D F + GD + D + +N Sbjct: 321 VTVSGKENAARDRVYDVVGSLCENCDKFAVQRELPEIVPGDLLIIHDAGAHGRAMGFNYN 380 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + DG+I IR + +DY+ L Sbjct: 381 AKLRCGELLLRTDGSIVQIRRNETVDDYFATL 412 >gi|29346784|ref|NP_810287.1| diaminopimelate decarboxylase [Bacteroides thetaiotaomicron VPI-5482] gi|253572240|ref|ZP_04849643.1| diaminopimelate decarboxylase [Bacteroides sp. 1_1_6] gi|298386569|ref|ZP_06996125.1| diaminopimelate decarboxylase [Bacteroides sp. 1_1_14] gi|29338681|gb|AAO76481.1| diaminopimelate decarboxylase [Bacteroides thetaiotaomicron VPI-5482] gi|251838015|gb|EES66103.1| diaminopimelate decarboxylase [Bacteroides sp. 1_1_6] gi|298260946|gb|EFI03814.1| diaminopimelate decarboxylase [Bacteroides sp. 1_1_14] Length = 386 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 65/366 (17%), Positives = 121/366 (33%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + K + A+K A + + + G S Sbjct: 13 LQTPFYYYDTKVLRDTLSAINQEVAKYPSYSVHYAVKANANPKVLTIIRESGMGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + K + FN ++ +L + A Q Sbjct: 73 GEIRAAVRAGFPANKIVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKI 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP V ++ G +D +E + GL FH + Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDRVIDVALEMKNVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218 F+ + ++ + +E I++GGG+ + F Sbjct: 193 ILDMGDFIALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQSVPDFKSYFATYA 252 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275 + + ++ E G A+V +L + VL + + K + D+ + + L Y Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTKKKFAILDAGMTDLIRPALYQAY 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + I V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKMENITSEEPVEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372 Query: 336 GINMPT 341 +P Sbjct: 373 CRELPK 378 >gi|332638809|ref|ZP_08417672.1| diaminopimelate decarboxylase [Weissella cibaria KACC 11862] Length = 428 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 60/395 (15%), Positives = 112/395 (28%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y D + + + + + A K FA M++ Q S Sbjct: 28 GTPLYAYDVGAMRQQMRDFKRVFEERHLNYAVSYASKAFATIAMYEVAAQEGMHIDVVSG 87 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ KF ++N K + A+ + TII + +L + ++ Sbjct: 88 GEIYTALRAKFPMADVSFNGNNKSVEELTMAIENGLGTIIVDNFYELQVLHELLAERQQT 147 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + I LRI P V + S+ G + + NV G+ H Sbjct: 148 QDILLRITPGVEAHTHDYISTGQTDSKFGFDVNSGQAEAALQQALADPNLNVLGVHAHIG 207 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-------- 218 + F + + + + I+ GGG Sbjct: 208 SQIFDVTGFQMAAAKLVDLVHEWDFEPQVINAGGGFGIRYTADDEPLPAATFVEAIIDTI 267 Query: 219 ---KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273 +++EPG +IV T+ + VD + ++ L Sbjct: 268 AEKAAAYGMQMPAVWIEPGRSIVGPAGYSLYTIGSRKDVPGIRSYLAVDGGMGDNIRPAL 327 Query: 274 LYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + + V G+ C +GD+ K GD ++ Y + Sbjct: 328 YQAKYEAVLAAQPDAPSDEVVRVAGKYCESGDVLVWEQALPKTKPGDVLAVLATGAYGYS 387 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + D + + D Sbjct: 388 MASNYNRNGRPAVVFVENDQAKVVVERETLADLVR 422 >gi|124026196|ref|YP_001015312.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. NATL1A] gi|123961264|gb|ABM76047.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. NATL1A] Length = 454 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 56/395 (14%), Positives = 115/395 (29%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ L T + L A K ++ + + G + S Sbjct: 48 GTPLYVLDEFSLRTACKTYISSLNKHYPGKSLPLFASKANSSLAICAVIASEGFGLDAVS 107 Query: 60 LYEVMLGHEKFGGET--HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHK 116 E++ E + E++ SN TI+ + + K+ A Sbjct: 108 EGELLTAINGGVKEKDIVFHGNNKSQDELNFAYSNNVTIVLDNYHDIELLKNIASDNKPA 167 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169 K+ LR P + S+ G ++ + N+ GL H + Sbjct: 168 KLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDDLKSILEELKTYKWANLTGLHAHIGSQI 227 Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQ---------R 217 + + + ++LGGG+ + Sbjct: 228 FEVQPHIDLAGVMADALKLAKEIGHPVVDLNLGGGLGIKYVQEDNPPSIEKWVEIISKAV 287 Query: 218 LKEFSEKYSVQI--YLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL 273 +K E+ EPG ++V N+ + + ++ + VD + + Sbjct: 288 VKACRERNLDLPRLMCEPGRSLVANSGLTIYKIGAKKVVPGVRTYLSVDGGMSDNPRPIT 347 Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + + + G+ C +GD+ + + GD ++ YN + Sbjct: 348 YQSLYSACLVDKPMNTNFEKVTIAGKHCESGDVLLKDFLLPSCESGDFLAVFGTGAYNYS 407 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N I P + R D Sbjct: 408 MSSNYNRIPRPATIMVGKGSAELTQRRELPEDLLQ 442 >gi|253699983|ref|YP_003021172.1| Orn/DAP/Arg decarboxylase 2 [Geobacter sp. M21] gi|251774833|gb|ACT17414.1| Orn/DAP/Arg decarboxylase 2 [Geobacter sp. M21] Length = 421 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 59/391 (15%), Positives = 123/391 (31%), Gaps = 34/391 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +TP+++ D+ + + G + A+K + + + G SS+ Sbjct: 23 QTPFHIYDESGIRETGAQLVKAFSGIPGFREFFAVKALPNREILKLMKEMGFGFDCSSIP 82 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 EV+L E E + ++ A + + +S + K ++ Sbjct: 83 EVILARELGARPEDIMFTSNNTSQEEFDFATQDGGCILNLDDISLIEKVPH-----FPEM 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCE---- 168 + N ++ G + +E+ K GL Sbjct: 138 ICFRYNPGPRRTGNVIIGNPEEAKYGVSHEQVVEAYRKAKERGATRFGLHTMVASNELDY 197 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 +L+ E+ + E++++GGG + + + E + Sbjct: 198 TYIVETARMVLEVAEEVEAALGIEFEFVNIGGGFGIPYRPEQKPLDLTGMSAEITELFDG 257 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 ++ +Y+E G + L TT ++ + + + VD+ + A + L Sbjct: 258 FRKRHGHAPAMYMESGRFMTGPHGALVTTAINSKDTYRRYIGVDACMSALMRPALYGAYH 317 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F +PV+ GD + D + + Sbjct: 318 HIDVLGKDRDPKTEIYDVVGSLCENNDKFAVQRELQPVEDGDILVIHDSGAHGHAMGFQY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG P + DG ++ IR + DY+ Sbjct: 378 NGRLRPKELMLRADGRVELIRRAETVADYFA 408 >gi|29827457|ref|NP_822091.1| diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] gi|29604556|dbj|BAC68626.1| putative diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] Length = 466 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 62/397 (15%), Positives = 126/397 (31%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+Q++ T A ++ A K F M + + G S E Sbjct: 68 GTPVYVLDEQEVRERCRTYRTAFPEAD--VVYAAKAFLCRAMAHWVQEEGLGLDVCSAGE 125 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKKI 118 + L F E + + A+ I+ ++ S++ + +K+ Sbjct: 126 LALAVTTGFPPEKIVMHGNAKSPEDLRTALRLGVGRIVVDSASEIARLAAITPCDTRQKV 185 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169 +R+ P ++ G D ++ + GL H + Sbjct: 186 MVRVVPGIAAGGHTKIRTGTDDQNFGLSLTDGSAQHAITRILDQPHLELVGLHCHIGSQI 245 Query: 170 ----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 M+ + + + +++GGG + L Sbjct: 246 AAVKPYVAAVRRMVGLMARVRDQHGVILPQLNIGGGHAIAYRPGDETMNVGVLAGRVRAE 305 Query: 226 -----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYL 273 ++ +EPG A+V VL + ++ + VD + + L Sbjct: 306 LEDGCARARLPVPRLTIEPGRAVVGPAGVAVYRVLAVKRTGEHTFVAVDGGMSDNPRPAL 365 Query: 274 L---YQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 Y P++ P V GR C AGD+ + V+ GD ++ Y++ Sbjct: 366 YGVRYAPRLIGRPSSAPSRFVTVVGRHCEAGDVLADGVALPGDVRPGDLLAVPAAGAYHL 425 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + +R S +D Sbjct: 426 SMTSGYNLVGRPPVVAVSDGIARVLVRRESLDDMSRR 462 >gi|125624015|ref|YP_001032498.1| LysA protein [Lactococcus lactis subsp. cremoris MG1363] gi|124492823|emb|CAL97778.1| LysA protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070785|gb|ADJ60185.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. cremoris NZ9000] Length = 419 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 67/394 (17%), Positives = 122/394 (30%), Gaps = 30/394 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L++ G +S Sbjct: 19 PTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGCGVDCASYV 78 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-I 118 E++L F G ++ E TI + + K+ + K + Sbjct: 79 ELLLSEKCGFDGTEMMFSSNDTPAEEFQFANQLGATINLDAYEHIEFLKNLPDFVFPKTM 138 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN--- 169 LR NP ++ N S+ G I+ + V G+ Sbjct: 139 SLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKEFGMHSFLASNTVTN 198 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + +++I+L GGI + + ++ + K + Sbjct: 199 DYYPELARKLFELALEIRQETGITLDFINLSGGIGVNYRPDEEANDIAKIGQGVHKAYEE 258 Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I Y E G ++ L T VL + E + V VD+S + Sbjct: 259 ILTANGIENLKIYTELGRFMLAPHGHLITKVLHLKETYRKYVGVDASAVNLMRPAFYDAY 318 Query: 278 SATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 T + G C D F + +K+GD + D + + Sbjct: 319 HHITVAGKEKQEATETYDITGSLCENNDKFAKERAFPEIKVGDLLVIHDTGAHGFSMGYQ 378 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +N + DG + IR DY+ L Sbjct: 379 YNAKLRSAEILLQEDGKTRLIRRAEKPADYFATL 412 >gi|167758309|ref|ZP_02430436.1| hypothetical protein CLOSCI_00648 [Clostridium scindens ATCC 35704] gi|167664206|gb|EDS08336.1| hypothetical protein CLOSCI_00648 [Clostridium scindens ATCC 35704] Length = 424 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 121/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ L N+ N G K A+K + + L +Y G SS Sbjct: 20 PTPFHLYDEKGLRRNMKALKEAFAWNKGYKEYFAVKATPNPFLINILKEYGCGCDCSSYT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML GE ++ E I + ++ ++ + + + I Sbjct: 80 ELMLSEAIGVTGEDIMFSSNDTPAEEFAYAEKLGAIINLDDITHIDFLEQTIGHIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N S+ G + ++ + G+ Sbjct: 140 CRYNPGGLFKISNDIMDNPGDSKYGMTTEQLFESFKILKEKGAKEFGIHAFLASNTVTND 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + K I++I+L GGI + + + + + + Sbjct: 200 YYPMLAKILFELAVKLQMETGVHIKFINLSGGIGIPYTPDQEPNDIRMIGDGVRRVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + K V VD+ + + Sbjct: 260 LTPAGMGDVAIYTELGRFMMGPYGCLVTKAIHEKHTHKEYVGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + G C D F + GD + D + + + Sbjct: 320 HITVMGKEDIPCDHKYDIAGSLCENNDKFAIDRMLPKIDKGDLLVIHDTGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DGT++ IR + DY+ Sbjct: 380 NGKLKSAELLLKEDGTVQLIRRAETPADYFA 410 >gi|164688315|ref|ZP_02212343.1| hypothetical protein CLOBAR_01960 [Clostridium bartlettii DSM 16795] gi|164602728|gb|EDQ96193.1| hypothetical protein CLOBAR_01960 [Clostridium bartlettii DSM 16795] Length = 432 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 60/401 (14%), Positives = 116/401 (28%), Gaps = 39/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y+ D++ + + + K G K+ A K F M + + S Sbjct: 29 KTPLYVFDEELIRSKCREYIKSFKVKENGNKVAYAGKAFLTKYMCKLVCEEGLCLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLH 115 E+ E ++ K D + + + +L+ Sbjct: 89 GELYTAYKAGMPMENILFHGNNKTVDEVKLGIELGVGRFVVDNFYELDLIEKFCLENNKT 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 +KI R+ P + + S+ G + + + + G+ H Sbjct: 149 QKIYFRVTPGIDAHTHKYIRTGQIDSKFGFALINGDFYKAVEKVKQYKNIELVGIHAHIG 208 Query: 167 CENKSFLCFSAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDYPVK--------- 212 + F ++ + K + + LGGGI + Sbjct: 209 SQIFEIKPFLDEVEIMLKLLKEVNENNDDINLTEVDLGGGIGVYYTEEDKPKTISEFCEA 268 Query: 213 --DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 + + E + +EPG ++V N + TV I E V + + Sbjct: 269 IINKADEVCEELNIKRPTLLIEPGRSLVANAGSTIYTVGSIKEIKNVRTYVSVDGGMTDN 328 Query: 269 VPDYLLYQESATIYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + L + N + + G+ C +GDI + GD + Sbjct: 329 IRPSLYQADYECGIVNKINKTGHNHKVTIAGKCCESGDILISDTEIGDINSGDILITTTT 388 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I + A + SY D Sbjct: 389 GAYGYSMASNYNKIPKNPVVFVQNGEDKLACKRQSYEDLLA 429 >gi|148239869|ref|YP_001225256.1| diaminopimelate decarboxylase [Synechococcus sp. WH 7803] gi|147848408|emb|CAK23959.1| Diaminopimelate decarboxylase [Synechococcus sp. WH 7803] Length = 453 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 48/396 (12%), Positives = 109/396 (27%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKL-LLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ + + G L + A K ++ + + G + S Sbjct: 46 GTPLYVLDEASIRQACRAYREALERHYPGPSLAIYASKANSSMALSALVASEGLGLDAVS 105 Query: 60 LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + E + E+ + ++ + L+ + + + Sbjct: 106 AGELITALDGGMPAERMVLHGNNKSLEELALAYRSGVMVVADNQHDLDLLQTIVPEGGEP 165 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCE 168 + L + P + S+ G + + V GL H + Sbjct: 166 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDELEPVLRALQGAAWARVEGLHAHIGSQ 225 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------- 218 + + + +++GGG+ Sbjct: 226 IFELEPHRDLAAVMADALGLARELGHPVRDLNVGGGLGIRYVSSDDPPSIDAWVQVVGTA 285 Query: 219 ----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDY 272 + ++ EPG ++V TV + I+ + VD + + Sbjct: 286 VASACQQRNLELPRLLCEPGRSLVAPAGVTVYTVGARKVVPGIRTYLSVDGGMSDNPRPI 345 Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + A T + G+ C +GD+ + G+ + YN+ Sbjct: 346 TYQSQYTACLADRPKAEAEETVTIAGKHCESGDVLLKDLPFPACTSGEILVVLATGAYNV 405 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + R D Sbjct: 406 SMSSNYNRIPRPATVLVKGAEAELVQRREQPEDLLR 441 >gi|116512127|ref|YP_809343.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. cremoris SK11] gi|116107781|gb|ABJ72921.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. cremoris SK11] Length = 419 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 66/394 (16%), Positives = 122/394 (30%), Gaps = 30/394 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L++ G +S Sbjct: 19 PTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGCGVDCASYI 78 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-I 118 E++L F G ++ E TI + + K+ + + Sbjct: 79 ELLLSEKCGFDGTEMMFSSNDTPAEEFQFANQLGATINLDAYEHIEFLKNLPDFVFPNTM 138 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN--- 169 LR NP ++ N S+ G I+ + V G+ Sbjct: 139 SLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKEFGMHSFLASNTVTN 198 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + +++I+L GGI + + ++ + K + Sbjct: 199 DYYPELARKLFELALEIRQETGVTLDFINLSGGIGVNYRPDEEANDIAKIGQGVHKAYEE 258 Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 IY E G ++ L T VL + E + V VD+S + Sbjct: 259 VLTANGIENLKIYTELGRFMLAPHGHLITKVLHLKETYRKYVGVDASAVNLMRPAFYDAY 318 Query: 278 SATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 T + G C D F + +K+GD + D + + Sbjct: 319 HHITVAGKEKQEATETYDITGSLCENNDKFAKERAFPEIKVGDLLVIHDTGAHGFSMGYQ 378 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +N + DG + IR + DY+ L Sbjct: 379 YNAKLRSAEILLQEDGKTRLIRRAENPADYFATL 412 >gi|323464497|gb|ADX76650.1| diaminopimelate decarboxylase [Staphylococcus pseudintermedius ED99] Length = 421 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 64/394 (16%), Positives = 121/394 (30%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + + G L A K F M + S Sbjct: 26 GTPTIVYDEAQIRQQMRRYHSAFQQNDIGYVLSYASKAFTCLQMVKLAAEEDFELDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F + ++ K S + + + +++ + A K Sbjct: 86 GELYTALEAGFDPQRIHFHGNNKTKHEIRYALESGIGYFVVDALDEIDLIEQYATKPVD- 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G E + + + G+ FH + Sbjct: 145 VLLRVNPGVEAHTHEFIQTGQEKSKFGLSLKHGLALEAVEKIRNTNNIVLKGIHFHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR--------LKE 220 + K + I+ ++LGGG + + +K Sbjct: 205 IEETTGMIETAKMVLNWLDEHAIMIDLLNLGGGFSAQYVEGDQSFDIEAGITEIVQAIKA 264 Query: 221 FSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 ++ I +EPG +IV V I + V + H+ L Sbjct: 265 ECQQLKYPIPTLSIEPGRSIVAEAGVTLYEVGTIKDIPGVNKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ T T + G+ C +GDI VK GD ++ Y+ + Sbjct: 325 AKYQALLINRNETPDETVTIAGKLCESGDIIIHEAKLPSSVKRGDYLAILTTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + ++ S N Sbjct: 385 SNYNQMQKPSVFFVKDGKAREVVKRQSLRQLIIN 418 >gi|115358995|ref|YP_776133.1| diaminopimelate decarboxylase [Burkholderia ambifaria AMMD] gi|115284283|gb|ABI89799.1| diaminopimelate decarboxylase [Burkholderia ambifaria AMMD] Length = 412 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 120/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + SL E Sbjct: 16 GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNLHILKLMRDERVCVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + + A Sbjct: 71 IERSLAAGFSPAGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARVGEHA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + IE IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIEAISAGGGLSIPYRDGEPRVDVSHYFSQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 ++V+I +EPG +V TL T V ++ K+ + +D+ + + A Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNHRPKHDFVLIDAGFNDLMRPSMYGSYHA 307 Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G C +GD+F + +IGD + D Sbjct: 308 VSVHAPDGALPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGASMSSNYNSRPLAPEVLIDRGTPRLIRRRQTIGELLA 407 >gi|291550060|emb|CBL26322.1| Diaminopimelate decarboxylase [Ruminococcus torques L2-14] Length = 423 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 61/391 (15%), Positives = 122/391 (31%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G K A+K + L +Y G SS Sbjct: 20 PTPFHLYDEKGIRENAKALKEAFAWNPGYKEYFAVKATPNPFLLQILKEYGCGCDCSSYT 79 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ G ++ + + I + ++ ++ + + + I Sbjct: 80 ELLMSDAVGIDGHDIMFSSNDTPEEDFKLADKLGAIINLDDITHIDFLEKTIGHIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N S+ G + ++++ G+ Sbjct: 140 CRYNPGGIFKISNDIMDNPGDSKYGMTTEQITEAFKTLKAKGAKEFGIHAFLASNTVTND 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + + I++I+L GGI + + + E K + Sbjct: 200 YYPMLAKVLFEQAVRLQKETGVHIKFINLSGGIGIPYTPDQEPNDIRVIGEGVRKVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + KN + VD+ + + Sbjct: 260 LVPAGMGDVAIYTELGRFMMGPYGCLVTKAIHEKNTYKNYIGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F V +GD + D + + + Sbjct: 320 HITVLGKEDAPCDHKYDVTGSLCENNDKFAIDRMLPEVDMGDYLVIHDTGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR + DY+ Sbjct: 380 NGKLKSAELLLKEDGSVQMIRRAETPKDYFA 410 >gi|170699414|ref|ZP_02890459.1| diaminopimelate decarboxylase [Burkholderia ambifaria IOP40-10] gi|170135670|gb|EDT03953.1| diaminopimelate decarboxylase [Burkholderia ambifaria IOP40-10] Length = 412 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 121/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + SL E Sbjct: 16 GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNLHILKLMRDERVCVDAVSLGE 70 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + D A + + T+ ++ L + + A Sbjct: 71 IERSLAAGFSPAGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARVGEHA--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + S + + IE IS GGG+ Y + R + Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIEAISAGGGLSIPYRDGEPRVDVGHYFSQWDAARKRIE 247 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 ++V+I +EPG +V TL T V ++ K+ + +D+ + + A Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNHRPKHDFVLIDAGFNDLMRPSMYGSYHA 307 Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + G C +GD+F + +IGDR+ D Sbjct: 308 VSVHAPDGALPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDRLFLHDAG 367 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407 >gi|331695513|ref|YP_004331752.1| diaminopimelate decarboxylase [Pseudonocardia dioxanivorans CB1190] gi|326950202|gb|AEA23899.1| diaminopimelate decarboxylase [Pseudonocardia dioxanivorans CB1190] Length = 499 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 55/415 (13%), Positives = 124/415 (29%), Gaps = 55/415 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + + A K F + + + +S E Sbjct: 66 GTPLFVVDEADFRSRAAEFAASFGAEA--VHYAAKAFLSTEIARWVADEGLSMDVASGGE 123 Query: 63 VMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKK 117 + + F E A + K +AV + I+ ++ ++ + A+ + Sbjct: 124 LAVALRAGFPAERIAVHGNNKSATELDEAVAAGVGRIVVDSFHEIARLDAVARARDVVVP 183 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG------------EKCKDKIESEIKNVNGLMFHN 165 + +R+ V + G E + + + + GL H Sbjct: 184 VMIRVTVGVEAHTHEFIATAHEDQKFGFSISGGDTSPAAEAARRVLAARGLRLVGLHSHI 243 Query: 166 NCENKSFLCF--------SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKD 213 + F + + + + + + LGGG + V + Sbjct: 244 GSQIFDTEGFEVAAHRVVRFLARLHAEHGADALEDLTTLDLGGGFGIAYRAEESPLDVAE 303 Query: 214 FCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLDISENI-----KNLVIV 261 +L++ ++ I +EPG AI T V + + + V V Sbjct: 304 LAAQLRDIVKRECHAEDLDVPAIAVEPGRAIAGPGTVTLYEVGTLKDVPLGSGARRYVSV 363 Query: 262 DSSVEAHVPDYLLYQESATIYPNTG-----------PYTAMVCGRSCLAGDIFGEFHFEK 310 D + ++ L + + V G+ C +GDI + Sbjct: 364 DGGMSDNIRTALYDAVYDCRLVSRSSAADSPDGSADAALSRVVGKHCESGDIVVRDCWLP 423 Query: 311 -PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + GD ++ Y + + +N + P + +R + +D + Sbjct: 424 ADLGPGDLLAVAATGAYCYSMASSYNRLPRPAVVAVRDGRARLILRRETVDDQFR 478 >gi|227501672|ref|ZP_03931721.1| diaminopimelate decarboxylase [Corynebacterium accolens ATCC 49725] gi|227077697|gb|EEI15660.1| diaminopimelate decarboxylase [Corynebacterium accolens ATCC 49725] Length = 445 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 59/404 (14%), Positives = 132/404 (32%), Gaps = 43/404 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ D+ + + A K F + + +N+ +++L E Sbjct: 39 QTPLYVFDEDDFRSRCQDMARAFGGPDH-VHYASKAFISKKVVQWVNEEGLCLDAAALNE 97 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F + KD E + ++ + +L + A + + Sbjct: 98 LKIALAAGFPAARITAHGNNKDEEYLRLCVDAGVGHVVIDNEQELEELNRIAGEAGVVQP 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ P V + + G K +E + +++GL H + Sbjct: 158 VMIRVKPGVDAHTHEFVATSHEDQKFGISLATGAAFAAAKRCLEVDNLHLSGLHCHVGSQ 217 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKD 213 + F +L+ + + + LGGG Y + Sbjct: 218 VFNAEGFKLAAERVLELYRQIHTELGVDLAELDLGGGFGIPYMPYEEALDIDRVAKDMLR 277 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265 + E + + + +EPG ++V + V + + ++ + +D + Sbjct: 278 AVDQTAEDLDIKAPFLLVEPGRSLVAGSAVTVYRVGTVKDVETGKADLPVRRYISIDGGM 337 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320 ++ L E + + + + G C +GDI E ++ GD ++F Sbjct: 338 SDNIRPALYSSEYDVRLVNRFSDGEMVPSRIVGFHCESGDILLEEGELPNDIQPGDLLAF 397 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 GY + +NG P + V T +R + D + Sbjct: 398 AATGGYQYMMSSRYNGAVRPAVVATRVGNTKPMLRRETIEDLLS 441 >gi|299531856|ref|ZP_07045257.1| diaminopimelate decarboxylase [Comamonas testosteroni S44] gi|298720176|gb|EFI61132.1| diaminopimelate decarboxylase [Comamonas testosteroni S44] Length = 415 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 55/400 (13%), Positives = 111/400 (27%), Gaps = 45/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + A K + + + + + S E Sbjct: 18 GTPLWVYDAATIRERIAQLK-AFD----TVRFAQKACSNIHILKLMREQGVKVDAVSRGE 72 Query: 63 VMLGHE-----KFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLH 115 V+ FG + D A + + + ++ A Sbjct: 73 VLRALAAGFTPGFGEPADIVFTADVMDEATLATVV--EHQVPVNAGSIDMLHQLAAVSKG 130 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCEN 169 + LRINP + + S+ G D I++ + GL H Sbjct: 131 HHVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSELEAALDAIKAGGLVLAGLHMHIGSGV 190 Query: 170 KSFLCFSAMLKNIE--KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---- 223 ++ + + IS GGG+ K + Sbjct: 191 DYGHLQEVCGAMVKLVERTKAAGVDLHAISAGGGLSIPYKQGDATIDTNHYHGLWDAARK 250 Query: 224 ------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQ 276 +S+ + LEPG +V + L TV N + VD+ + + Sbjct: 251 QAEGIVGHSLGLELEPGRFLVAESGVLLGTVRATKNAGSNHFVLVDTGFNELMRPSMYGS 310 Query: 277 ESATIYPNT-----GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 ++V G C +GD+F + +GD + D Sbjct: 311 YHGMEVLRRDGQSLPAQDSVVAGPLCESGDVFTQGDGGVVLPRALAGASVGDLLVIHDTG 370 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + + + R + + Sbjct: 371 AYGSSMSSNYNTRPLAAEVLVDGEQSQLIRRRQTVEELLA 410 >gi|15673266|ref|NP_267440.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis Il1403] gi|12724260|gb|AAK05382.1|AE006360_11 diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis Il1403] Length = 419 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 66/394 (16%), Positives = 123/394 (31%), Gaps = 30/394 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L++ G +S Sbjct: 19 PTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGCGVDCASYV 78 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-I 118 E++L F G ++ E TI + + K+ + + + Sbjct: 79 ELLLSEKCGFDGSEMMFSSNDTPAEEFQFANQLGATINLDAYEDIEFLKNLTDFIFPETM 138 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN--- 169 LR NP ++ N S+ G I+ + V G+ Sbjct: 139 SLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKKFGMHSFLASNTVTN 198 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + K + +++I+L GGI + + ++ + + + Sbjct: 199 DYYPELANKLFKLALEIREETGITLDFINLSGGIGVNYRPDEEANDIAKIGQGVHEAYDE 258 Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 IY E G ++ L T VL I E + V VD+S + Sbjct: 259 VLRANGIENLKIYTELGRFMLAPHGHLITKVLHIKETYRKYVGVDASAVNLMRPAFYDAY 318 Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G C D F + ++IGD + D + + Sbjct: 319 HHITVAGKEKDEATEIYDITGSLCENNDKFAKERAFPKIEIGDLLVIHDTGAHGFSMGYQ 378 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +N + + DG + IR DY+ L Sbjct: 379 YNAKLRSSEVLLQEDGKTRLIRRAEKPADYFATL 412 >gi|116073043|ref|ZP_01470305.1| Diaminopimelate decarboxylase [Synechococcus sp. RS9916] gi|116068348|gb|EAU74100.1| Diaminopimelate decarboxylase [Synechococcus sp. RS9916] Length = 456 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 54/396 (13%), Positives = 107/396 (27%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ + + G L A K ++ + G + S Sbjct: 46 GTPLYVLDEAGIRAACRAYRTALECHYPGPSLAVYASKANSSLALSAIAASEGLGLDAVS 105 Query: 60 LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115 E++ + E + D E+ N I+ + L++ A + Sbjct: 106 AGELLTALKGGMPAERIVLHGNNKSDEELLLAYRNDVMIVADNQHDLDRLAVLVPAGERP 165 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE 168 ++ LR P + S+ G V GL H + Sbjct: 166 ARLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEPVLRHLATCGWAKVTGLHAHIGSQ 225 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + + + +++GGG+ + + + Sbjct: 226 IFELNPHRDLAAVMADALKLARGLGHPVTDLNVGGGLGIRYVESDDPPSIDAWVQVVAEA 285 Query: 226 SVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 V EPG ++V ++ ++ E VD + + Sbjct: 286 VVAACRERSLDLPRLLCEPGRSLVASSGVTLYSIGSRKEVPGVRTYLSVDGGMSDNPRPI 345 Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 A + + G+ C +GD+ P GD + YN Sbjct: 346 TYQSLYTALLADRPQAEATESITLAGKHCESGDVLLNDLALPPSVSGDVLVVLATGAYNA 405 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + + R S D Sbjct: 406 SMSSNYNRIPRPAAVLVHDGMAEVIQRRESSEDLLR 441 >gi|288927565|ref|ZP_06421412.1| diaminopimelate decarboxylase [Prevotella sp. oral taxon 317 str. F0108] gi|288330399|gb|EFC68983.1| diaminopimelate decarboxylase [Prevotella sp. oral taxon 317 str. F0108] Length = 387 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 122/371 (32%), Gaps = 29/371 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+Y D+ L LD + ++ + A+K A + T+ G S Sbjct: 12 LSTPFYYYDEGMLRATLDALNEQLAQHPNFIVHYAVKANANKRILQTMKAAGLGVDCVSG 71 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F G++ + K+ A+ + ++ +L + +L++ Sbjct: 72 GEIEAALRAGFKGDSIVFAGVGKNDWEIKLALENGIFCFNVESIEELEVIEQLCSELNRT 131 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCE 168 + LR+NP+V+ ++ G + + GL FH + Sbjct: 132 ADVCLRVNPNVAAHTHAKITTGLAENKFGIPIGHVRPTIERLQVLKRIRFIGLHFHIGSQ 191 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------RL 218 F + ++ + E I++GGG+ + Sbjct: 192 IVDMNDFREVCTSVNSLLNLLKQHGIEPEHINVGGGLGIDYDNPDTHAIPDFKDYFDTYA 251 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277 + +++ E G A+V L + VL + + K +I+D+ + + LY Sbjct: 252 RHLQLNEKQKVHFELGRALVGQCGWLVSRVLYVKQGQNKRFLILDAGMNDLLRPA-LYHA 310 Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 I + P V G C + D+FG G ++ Y + Sbjct: 311 RHQILNLSKPSAPSEVYDVVGPVCESSDVFGSDVVLPASHRGHLVAICSAGAYGEAMASQ 370 Query: 334 FNGINMPTIAV 344 +N +P Sbjct: 371 YNCRQLPKSYF 381 >gi|326406821|gb|ADZ63892.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis CV56] Length = 419 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 67/394 (17%), Positives = 123/394 (31%), Gaps = 30/394 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L++ G +S Sbjct: 19 PTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGCGVDCASYV 78 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-I 118 E++L F G ++ E TI + + K+ + + + Sbjct: 79 ELLLSEKCGFDGSEMMFSSNDTPAEEFQFANQLGATINLDAYEDIEFLKNLTDFIFPETM 138 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN--- 169 LR NP ++ N S+ G I+ + V G+ Sbjct: 139 SLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKKFGMHSFLASNTVTN 198 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 S + K + +++I+L GGI + + ++ + + + Sbjct: 199 DYYPELASKLFKLALEIREETGITLDFINLSGGIGVNYRPDEEANDIAKIGQGVHEAYDE 258 Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 IY E G ++ L T VL I E + V VD+S + Sbjct: 259 VLRANGIENLKIYTELGRFMLAPHGHLITKVLHIKETYRKYVGVDASAVNLMRPAFYDAY 318 Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G C D F + ++IGD + D + + Sbjct: 319 HHITVAGKEKDEATEIYDITGSLCENNDKFAKERAFPKIEIGDLLVIHDTGAHGFSMGYQ 378 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +N + + DG + IR DY+ L Sbjct: 379 YNAKLRSSEVLLQEDGKTRLIRRAEKPADYFATL 412 >gi|256823976|ref|YP_003147936.1| diaminopimelate decarboxylase [Kytococcus sedentarius DSM 20547] gi|256687369|gb|ACV05171.1| diaminopimelate decarboxylase [Kytococcus sedentarius DSM 20547] Length = 445 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 59/403 (14%), Positives = 119/403 (29%), Gaps = 41/403 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP++L D+ + + G A+K + L++ G SSL Sbjct: 38 LPTPFHLYDEAAIRAHAREFNAAFAWAPGFLNHFAVKATPTPAIVRVLSEEGFGADCSSL 97 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTI-IFNTVSQLNKFKDKAQKLHKKI 118 E+ L GE + E A + + ++ L+ + A +L + + Sbjct: 98 PELELCDRLGIRGERIMFTSNDTPAEEFARAVELGAVANLDDITHLDTLEAAAGRLPELL 157 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFL- 173 R NP + ++ G + +++ + V H + Sbjct: 158 SFRYNPGA-ERTGNAIIGDPVQAKYGVTSEQLLDAYREARDRGVQRFALHTMVASNELDG 216 Query: 174 -----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + +E+++LGGGI Q + + Q Sbjct: 217 AYIVETARMVFELAVRLKDELGITLEFVNLGGGIGIPYGVDDAPMNLQAVSDGIRALHEQ 276 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 + E G + L + V +++ K V +D+S+ + + Sbjct: 277 VLTPSGLEGLGLRFECGRVMTGPYGYLVSRVRQVTQKYKTYVGLDASMHNLMRPAMYGSY 336 Query: 278 SATI---------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 T V G C D F V GD + D Sbjct: 337 HHITVLPGPDAASLPDAGDLAPGATSTYDVTGSLCENNDKFAIDRELPVVHPGDVVVLHD 396 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + + +NG + + +G IR + +D + Sbjct: 397 AGAHGHSMGFNYNGKLRSAEYLLDQNGQAHQIRRAETMDDLFA 439 >gi|227503836|ref|ZP_03933885.1| diaminopimelate decarboxylase [Corynebacterium striatum ATCC 6940] gi|227199660|gb|EEI79708.1| diaminopimelate decarboxylase [Corynebacterium striatum ATCC 6940] Length = 444 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 59/404 (14%), Positives = 125/404 (30%), Gaps = 43/404 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D+ + + A K F + +N+ +SL E Sbjct: 38 GTPLYVFDEDDFRSRCRDMARAFGGPEH-VHYASKAFITKRIVKWVNEEGLCLDVASLNE 96 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKL--HKK 117 + F + K+ E + + + ++ + +L + + A+ + Sbjct: 97 AKVALAAGFPPARMTAHGNNKEREYLELCVDNEIAHVVLDNEGELAQLNEIARAAGRVQP 156 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + +R+ P V + + G +ESE + GL H Sbjct: 157 VMIRVKPGVDAHTHEFIATSHEDQKFGISLATGAAFDAAKAALESENLQLVGLHCHVGSS 216 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKD 213 + F + ++ ++ + LGGG +Y + Sbjct: 217 VFNAEGFKLAAERVLSLYKRIHTELGVALKELDLGGGFGIPYMEYEEALDVAKLAQDLLA 276 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265 +R + + +EPG ++V + +V + + I+ + VD + Sbjct: 277 AVERTAHELDIEPPFVLVEPGRSLVGASAVTVYSVGTVKDVETGKAELPIRRYLSVDGGM 336 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320 ++ L E + + P + V G C +GDI + GD ++F Sbjct: 337 SDNIRPALYESEYDVRVVNRFTDGEPVDSRVVGFHCESGDILVNERKLPGDITTGDLLTF 396 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +NG P + +R + +D Sbjct: 397 ATTGAYQYMMASRYNGALRPAVVSVRNGQANLMLRRETVDDLLA 440 >gi|172040373|ref|YP_001800087.1| hypothetical protein cur_0693 [Corynebacterium urealyticum DSM 7109] gi|171851677|emb|CAQ04653.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 462 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 52/404 (12%), Positives = 116/404 (28%), Gaps = 43/404 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + G ++ A K F + + + + +SL E Sbjct: 57 GTPSFVMDEADFRSRCREMAEAFGG-GERVHYASKAFISTAVCRWVAEEGLSLDVASLGE 115 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + ++ AV + + I+ +++ ++ + A+ L + Sbjct: 116 LRIALHADFPAERITVHGNNKNEEFLRAAVEAGVELIVIDSLQEIAELSRVARDLGTTQD 175 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ P V + + G + ++ + ++ + GL H + Sbjct: 176 VLVRVTPGVHVDTHEFIATSHEDQKFGFSLASGKAKQAAEECLAADGLVLRGLHCHVGSQ 235 Query: 169 NKSFLCFSAMLKNIEKEF------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 F + + + + LGGG + Sbjct: 236 VFDADGFVLAAERLLGLWKQLLSHEATGADFNVLDLGGGYGIAYTPDQEALDVASVARNL 295 Query: 223 EKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------V 265 + + +EPG AI V + + + V + Sbjct: 296 LAKVAEAAEEAGVPTPIVNVEPGRAIAGPAMVTIYRVGTVKDVETSDHTVRRYVSVDGGM 355 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISF 320 ++ L E + + G C +GDI V GD ++ Sbjct: 356 SDNIRPALYQAEYDVRVVNREVSGTLVPTRIVGSHCESGDILINDVPVPDDVAPGDLLAI 415 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + IR D Sbjct: 416 AATGAYCYSMSSRYNMFLRPPVITVADGQDRVMIRRERLEDILA 459 >gi|255690076|ref|ZP_05413751.1| diaminopimelate decarboxylase [Bacteroides finegoldii DSM 17565] gi|260624353|gb|EEX47224.1| diaminopimelate decarboxylase [Bacteroides finegoldii DSM 17565] Length = 386 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 120/366 (32%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + K + A+K A + + + G S Sbjct: 13 LQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLAIIRESGMGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + K + FN ++ +L + A Q Sbjct: 73 GEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKI 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP V ++ G +D + + GL FH + Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVALGMKNIKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218 F+ + ++ + +E I++GGG+ + F Sbjct: 193 ILDMGDFVALCNRVNELQDKLEAHRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFATYA 252 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275 + + ++ E G A+V TL + VL + + K + D+ + + L Y Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGTLISKVLYVKQGAKKKFAILDAGMTDLIRPALYQAY 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKMENLTSEEPMEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372 Query: 336 GINMPT 341 +P Sbjct: 373 CRELPK 378 >gi|313205431|ref|YP_004044088.1| diaminopimelate decarboxylase [Paludibacter propionicigenes WB4] gi|312444747|gb|ADQ81103.1| diaminopimelate decarboxylase [Paludibacter propionicigenes WB4] Length = 387 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 66/367 (17%), Positives = 123/367 (33%), Gaps = 25/367 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP+Y D + L L+ K + + A+K + + G S Sbjct: 14 IETPFYYYDLEVLRKTLEEINIQSKKSDFHVHYAMKANVNPSVLAAIKDAGLGADCVSGG 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDK--AQKLHK 116 EV + K + + D ++ +L + A+ Sbjct: 74 EVQAAIDAGISPSKVVFAGVGKADWEINLGLDNDIFCFNVESIPELEVINELAAAKNKVA 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169 K+ LRINP+VS ++ G + + + G+ FH + Sbjct: 134 KVALRINPNVSAHTHHYITTGLSENKFGINMSELDQVVDLFPTLSNVKLIGIHFHIGSQI 193 Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSE 223 F + +++ F +E I++GGG+ + +P+ DF K F + Sbjct: 194 TDLTSFQGLCVRVNELQEYFQSRNVVLEHINVGGGLGINYEHPNHFPIPDFDAYFKVFRD 253 Query: 224 KYS----VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276 ++ E G A+V +L + VL + + + K I+D+ + L Y Sbjct: 254 HLQLLPNQTLHFELGRAVVAQCGSLISKVLYVKQGSSKKFAILDAGFTDLIRPALYQAYH 313 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + V G C + D F + K GD I+ Y + +N Sbjct: 314 HIENLSSDLAVEPYDVVGPICESSDTFAKGFELNQTKRGDLIALRSAGAYGEIMASQYNL 373 Query: 337 INMPTIA 343 +P Sbjct: 374 RKLPKAY 380 >gi|307825889|ref|ZP_07656104.1| Orn/DAP/Arg decarboxylase 2 [Methylobacter tundripaludum SV96] gi|307733008|gb|EFO03870.1| Orn/DAP/Arg decarboxylase 2 [Methylobacter tundripaludum SV96] Length = 380 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 101/366 (27%), Positives = 187/366 (51%), Gaps = 8/366 (2%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P +++D+ ++ L+ +R G K+L ++K + D ++DG + SSL+E Sbjct: 13 SPAFVLDEIEVTKALEILAELRTQCGCKILYSIKSLPFSAVMDMAKPFVDGFSVSSLFEA 72 Query: 64 MLGHEKFGGE--THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L E G+ H + E+D + C I FN+++Q ++ + A IGLR Sbjct: 73 RLADEVLAGQSSIHLTTPGIRQDELDELSLLCSHISFNSLTQHQRYSETA-GAQSSIGLR 131 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-VNGLMFHNNCENKSFLCFSAMLK 180 +NP +S+ DP R S+LG + S + + GL HN F ++ Sbjct: 132 VNPKLSFLHDERFDPCRQHSKLGVAIDELSHSICLDQIEGLHVHNVFSATDFTPLIKTIE 191 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +++ G + Q+EW+++GGG F + F + + + + V++Y+EPG+AIV Sbjct: 192 KLQQHLGAGLAQLEWLNIGGGYLFGQ-IEDHRPFVELVNKLKHDFGVEVYIEPGKAIVGR 250 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT--GPYTAMVCGRSCL 298 L TVLD + +++ + H P+ YQ ++ + G Y A++ G +CL Sbjct: 251 AGHLVATVLDRFVSDGETIVILDTSINHNPEVFEYQRQPELHEHDPDGQYAAILAGCTCL 310 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 AGD+FG++ F++P+++GD++ F++V Y + + N FNG N+P I + + +K ++ + Sbjct: 311 AGDVFGQYRFKEPLEVGDKVVFKNVGAYTLIKANRFNGYNLPDIYL-SNSLRVKKMKHYD 369 Query: 359 YNDYYN 364 Y DY Sbjct: 370 YQDYRR 375 >gi|313905720|ref|ZP_07839080.1| Orn/DAP/Arg decarboxylase 2 [Eubacterium cellulosolvens 6] gi|313469427|gb|EFR64769.1| Orn/DAP/Arg decarboxylase 2 [Eubacterium cellulosolvens 6] Length = 427 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 66/394 (16%), Positives = 126/394 (31%), Gaps = 29/394 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP++L D++ + N N G + A+K + L +Y G SS+ Sbjct: 19 VPTPFHLYDEKGIRENARAVKEAFSWNPGFREYFAVKATPTPALIKILGEYDCGCDCSSM 78 Query: 61 YEVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ML F G ++ E I + + ++ + KL K++ Sbjct: 79 TELMLSEAMGFDGNHIMFSSNDTPPEEYKKAADMGAIINLDDFTAIDIVEKTLGKLPKRM 138 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCE 168 R NP ++ N S+ G E+ + K V H Sbjct: 139 SCRYNPGGLFALSNGIMDNPGDSKYGMTTDQLFEAFRVMKAKGVEEFGIHAFLASNTVTN 198 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + K + + +I+L GG+ + + + + + EK + Sbjct: 199 EYYPKLAEVLFKLAVQLQNVTGAHVTFINLSGGVGIPYEPWQEPNDIRAIGAGVEKVYNK 258 Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I+ E G ++ L T ++ K + VD+ + + Sbjct: 259 VLVPAGMDDVSIFAEMGRFMMGPYGALVTKAINEKHIYKEYIGVDACAVNLMRPAMYGSY 318 Query: 278 SATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + V G C D F +++GD + D + + Sbjct: 319 HHITVLGKENAECDHKYDVTGSLCENNDKFAIDRMLPEIELGDILYIHDTGAHGFSMGYN 378 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +NG + DG+ + IR + DY+ L Sbjct: 379 YNGKLWSAEVLLKEDGSFEVIRRPETPKDYFATL 412 >gi|33863330|ref|NP_894890.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9313] gi|33640779|emb|CAE21234.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9313] Length = 455 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 50/396 (12%), Positives = 106/396 (26%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ L + + + A K ++ M + G S Sbjct: 48 GTPLYVLDEATLRAACQSYRGALQRHYPGPSLPIYASKANSSLMMSSLVASEGFGLDVVS 107 Query: 60 LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + G+ + D E+ N TI+ + L++ Sbjct: 108 AGELLTALKGGVPGDCIVLHGNNKSDQELLLAYRNGVTIVADNQHDLDRLSQLVPVGADP 167 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168 L + P + S+ G + + GL H + Sbjct: 168 AKLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLESVLNQLLGCRWARLTGLHAHIGSQ 227 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + + + +++GGG+ + + Sbjct: 228 IFELEPHQDLADVMAGALQLARRLGHPVMDLNVGGGLGVRYVSSDDPPSIDNWVKVVAEA 287 Query: 226 SVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272 Q + EPG ++V V + + VD + + Sbjct: 288 VNQACRSRNLDLPRLMCEPGRSLVAAAGVTLYRVGSRKTIPGLRTYLSVDGGMSDNPRPI 347 Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + + T + G+ C +GD+ + GD + YN+ Sbjct: 348 TYQSLYTACLADRPLASPDETITLVGKHCESGDVLLKDLALPYASSGDVLVVFATGAYNV 407 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + + + R D Sbjct: 408 SMSSNYNRIPRPAAVLVHSGHSELVQRREQPEDLLR 443 >gi|212550815|ref|YP_002309132.1| diaminopimelate decarboxylase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549053|dbj|BAG83721.1| diaminopimelate decarboxylase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 382 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 109/365 (29%), Gaps = 25/365 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP+Y D + L L + + A+K + + + G S Sbjct: 12 LQTPFYFYDIELLRKTLQVVVLEAAKYDYHIHYAVKANKNPRILSIIREMGLGADCVSGG 71 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKKI 118 E+ E F E + K + D FN S A + Sbjct: 72 EIETVLNEGFSAEKVVFAGVGKTDWEINLGLEKDIFCFNVESIPELVVINHLACAKNTIA 131 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169 LRINP + ++ G + G+ FH + Sbjct: 132 RVALRINPEIDSHTHHYITTGIKDNKFGINLDQLDRVLDMLSTLSSIQLVGIHFHIGSQI 191 Query: 170 K---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------- 219 F + + ++++F ++ I+ GGG+ ++ + Sbjct: 192 MDLTPFRLLCSQVNELQQKFIQRGIFLKHINFGGGLGIDYENPDENPIPSFREYFNVFRT 251 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--YQ 276 F + QI+ E G +IV L + VL + E ++ D+ + Y Sbjct: 252 HFFVLNNQQIHFELGRSIVGQCGNLISKVLYVKEGSVKRFVILDAGFTELIRPAFYESYH 311 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + V G C + D F + K GD I+ Y + +N Sbjct: 312 VIENLSLEEATDVYDVVGPICESSDCFAKQRVLKKTYRGDIIAIRSAGAYGEVMASQYNC 371 Query: 337 INMPT 341 +P Sbjct: 372 RQLPK 376 >gi|120405303|ref|YP_955132.1| diaminopimelate decarboxylase [Mycobacterium vanbaalenii PYR-1] gi|119958121|gb|ABM15126.1| diaminopimelate decarboxylase [Mycobacterium vanbaalenii PYR-1] Length = 476 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 60/406 (14%), Positives = 126/406 (31%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ G + A K F + +++ +S E Sbjct: 64 GTPVFVIDEADFRARCRDIAAAFGG-GEHVRYAAKAFLCTEVARWIDEEGLSLDVASGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E A + K AV + + ++ ++++++++ A + + Sbjct: 123 LAVALHAGFPAERIALHGNNKSVAELTAAVEAGIEHVVVDSMTEIDRLDKIAGEAGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + E++ + GL H + Sbjct: 183 VLIRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMTAVRRVFETDHLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + F + + + LGGG+ + + L + Sbjct: 243 IFDVAGFELAAHRVIGLLRDAVAEFGVEKTSQMSIVDLGGGLGISYLPHDDPPPMGELAD 302 Query: 221 FSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 + +EPG AI T V + + + V VD Sbjct: 303 KLHAIVRHESAAVGLPAPRLVVEPGRAIAGPGTITLYEVGTVKDVAISSDRNRRYVSVDG 362 Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L E + N P + V G+ C +GDI + V GD + Sbjct: 363 GMSDNIRTSLYDAEYDVRLVSRTSNAEPTLSRVVGKHCESGDIVVRDAWIPDDVGPGDLL 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I P + +R +++D + Sbjct: 423 GVAATGAYCYSMSSRYNLIGRPAVVAVRDGRARLILRRETFDDLLS 468 >gi|7573355|emb|CAB87661.1| diaminopimelate decarboxylase-like protein [Arabidopsis thaliana] Length = 496 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 61/394 (15%), Positives = 121/394 (30%), Gaps = 34/394 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ NL+ + + A+K + + L G S E+ Sbjct: 98 PFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELR 157 Query: 65 LGH-EKFG--------GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-- 113 L F ++ + ++ LN + ++ Sbjct: 158 LALLAVFDHVFGVDEMNRCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISG 217 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHN 165 + LRINP V S+ G + + + + G H Sbjct: 218 KQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPKELKLVGAHCHL 277 Query: 166 NCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQR 217 F + + ++ ++++GGG+ D Sbjct: 278 GSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINT 337 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQ 276 ++E + + +EPG +++ NT V + N KN +++D S+ + L Sbjct: 338 VRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDA 397 Query: 277 ESATIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + P V G C + D G+ G + D Y ++ Sbjct: 398 YQHIELVSPTPPEAEVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMA 457 Query: 332 NWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + +N P DG+I IR +++D+ Sbjct: 458 STYNLKMRPPEYWVEEDGSITKIRHAETFDDHLR 491 >gi|91772657|ref|YP_565349.1| diaminopimelate decarboxylase [Methanococcoides burtonii DSM 6242] gi|91711672|gb|ABE51599.1| Orn/DAP/Arg decarboxylase family / TabA-like [Methanococcoides burtonii DSM 6242] Length = 420 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 60/393 (15%), Positives = 111/393 (28%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N G + A+K + L G SSL Sbjct: 21 PTPFHIYDEKAIRTNARKLKDAFSIVEGFQEFFAVKALPNPYILKILKSEGFGADCSSLP 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L GE ++ E I + +S + + +A+ Sbjct: 81 ELLLAEKTGIVGENIMFSSNDTPAEEFVKAKELGAIINLDDISHIEFLEKEAELPELVC- 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFLCF 175 + N ++ G K + K V H + Sbjct: 140 -FRFNPGPLKEGNAIIGNPEEAKYGFTKKQLFEGYRMLKEKGVKRFGLHTMVASNELEPS 198 Query: 176 SAM------LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + I + + ++++LGGGI + + E + Sbjct: 199 YFVETAKLLFEVIVEISNELDIRFDFVNLGGGIGIPYRLDQEAVPYDVIAEGVRDEYEKS 258 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 LE G I L T V + K+ V D+ + + L Sbjct: 259 IKANGLDPLKIYLECGRTITGPYGYLVTEVRHLKHIYKDYVGTDACMANLMRPGLYGAYH 318 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F V+ GD ++ D + + Sbjct: 319 HITVLGKENKPEDHLYDVTGSLCENNDKFAIDRMLPEVERGDILAIHDSGAHGHAMGFNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + D ++ IR + D++ L Sbjct: 379 NGKLRSAELLLREDSSVVQIRRAETIEDHFVTL 411 >gi|302205971|gb|ADL10313.1| diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis C231] gi|308276206|gb|ADO26105.1| diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis I19] Length = 443 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 58/402 (14%), Positives = 123/402 (30%), Gaps = 41/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + A K+ A K F + + + +SL E Sbjct: 39 GTPVFVVDEDDFRDRCKDMAAAFGGAE-KVHYASKAFLTRRIARWVEEEGLNLDIASLGE 97 Query: 63 VMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKL--HKK 117 + F + + + ++S+ I+ +++++L + + A + + Sbjct: 98 FQVALSANFPPGRITAHGNNKSEEFLRVLVSHRVGHIVIDSMTELERLEKIAAEAGVTQP 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168 + +R+ P + + + G K IES + GL H + Sbjct: 158 VMVRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAYAAAKRVIESASLYLIGLHCHVGSQ 217 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKD 213 F +L K +E + LGGG + + Sbjct: 218 VFDAQGFSLAAQRVLTLYSKIHSELGIDLEQLDLGGGYGIAYTEDETPLDVTSVAQDLLA 277 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267 + + + ++ +EPG AI +T +V + + + + Sbjct: 278 AVDDVARTLDIDAPEVLVEPGRAIAGPSTVTVYSVGTVKDVHVTDKQLRRYIAVDGGMSD 337 Query: 268 HVPDYLL---YQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFED 322 ++ L Y G + + G C AGDI + GD I+ Sbjct: 338 NIRPALYEAEYDVRVINRNVAGDLVPSRIVGSHCEAGDILIHDRELPSGIIEGDLIALAA 397 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N + P + + +R + D Sbjct: 398 TGAYCFAMSSRYNMMGRPAVVSVKAGQSRVMVRRETIEDLLA 439 >gi|300858250|ref|YP_003783233.1| diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis FRC41] gi|300685704|gb|ADK28626.1| Diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis FRC41] gi|302330524|gb|ADL20718.1| diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis 1002] Length = 443 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 58/402 (14%), Positives = 123/402 (30%), Gaps = 41/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + A K+ A K F + + + +SL E Sbjct: 39 GTPVFVVDEDDFRDRCKDMAAAFGGAE-KVHYASKAFLTRRIARWVEEEGLNLDIASLGE 97 Query: 63 VMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKL--HKK 117 + F + + + ++S+ I+ +++++L + + A + + Sbjct: 98 FQVALIANFPPGRITAHGNNKSEEFLRVLVSHRVGHIVIDSMTELERLEKIAAEAGVTQP 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168 + +R+ P + + + G K IES + GL H + Sbjct: 158 VMVRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAYAAAKRVIESASLYLIGLHCHVGSQ 217 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKD 213 F +L K +E + LGGG + + Sbjct: 218 VFDAQGFSLAAQRVLTLYSKIHSELGIDLEQLDLGGGYGIAYTEDETPLDVTSVAQDLLA 277 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267 + + + ++ +EPG AI +T +V + + + + Sbjct: 278 AVDDVARTLDIDAPEVLVEPGRAIAGPSTVTVYSVGTVKDVHVTDKQLRRYIAVDGGMSD 337 Query: 268 HVPDYLL---YQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFED 322 ++ L Y G + + G C AGDI + GD I+ Sbjct: 338 NIRPALYEAEYDVRVINRNVAGDLVPSRIVGSHCEAGDILIHDRELPSGIIEGDLIALAA 397 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N + P + + +R + D Sbjct: 398 TGAYCFAMSSRYNMMGRPAVVSVKAGQSRVMVRRETIEDLLA 439 >gi|224024547|ref|ZP_03642913.1| hypothetical protein BACCOPRO_01273 [Bacteroides coprophilus DSM 18228] gi|224017769|gb|EEF75781.1| hypothetical protein BACCOPRO_01273 [Bacteroides coprophilus DSM 18228] Length = 386 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 77/365 (21%), Positives = 127/365 (34%), Gaps = 26/365 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D L + LDT K + A+K A + + + G S Sbjct: 13 LETPFYYYDTNLLRHTLDTIRKEAGKYNKFCVHYAVKANANPKVLSIIRESGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKK 117 E+ F Y K + + D FN +V +L + A K Sbjct: 73 GEIKAAIKAGFPANKIVYAGVGKTDAEINLGLDYDIFCFNVESVPELEVINELATAKGKI 132 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 RINP V ++ G KD +E N GL FH + Sbjct: 133 ARVAFRINPDVGAHTHANITTGLAENKFGISMKDMDHVIDRALEMNNINFVGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222 F + ++++ +E I++GGG+ PV DF + + Sbjct: 193 ILDMGDFTALCNRINELQEKLYARQIIVEHINVGGGLGIDYAHPNRQPVPDFASYFETYH 252 Query: 223 EKY----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--Y 275 + ++ E G ++V +L T V+ + + K IVD + + L Y Sbjct: 253 KHLKLRPQQTLHFELGRSVVGQCGSLITKVIYVKQGTNKQFAIVDGGMTDLIRPALYQAY 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + I + T V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKIENITSDEATETYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372 Query: 336 GINMP 340 +P Sbjct: 373 CRQLP 377 >gi|239628236|ref|ZP_04671267.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518382|gb|EEQ58248.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 422 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 119/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+YL D++ + N N G K A+K + + L + GT SS+ Sbjct: 20 PTPFYLYDEKGIRENAAKLKQAFAWNKGYKEYFAVKATPNPFLLNLLKEMGCGTDCSSMT 79 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G ++ E I + ++ + + + + I Sbjct: 80 ELMMSKACGFNGHDIMFSSNDTPPEEFAYAEKLGAIINLDDITHIECLEQTLGYIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL 173 R NP + N S+ G + ++ + G+ + Sbjct: 140 CRYNPGGVFKVSNDIMDNPGDSKYGMTTEQIFQAFKMLKDKGAKHFGIHAFLASNTVTVE 199 Query: 174 CFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + K +E+I+L GGI + + + + K + Sbjct: 200 YYPMLAKILFELAVKLQEETGAHVEFINLSGGIGIPYRPDQEPNDILAIGDGVRKVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I E G ++ L T + K V VD+ + + Sbjct: 260 LVPAGMDDVAICTELGRFMMGPYGALVTKAIHEKHTHKEYVGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F ++ GD + D + + Sbjct: 320 HITVMGKEDEPCGHMYDVVGSLCENNDKFAIDRMLPEIRKGDLLFIHDTGAHGFAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR + DY+ Sbjct: 380 NGKLKSAELLLKQDGSVEMIRRAETPEDYFA 410 >gi|300712120|ref|YP_003737934.1| diaminopimelate decarboxylase [Halalkalicoccus jeotgali B3] gi|299125803|gb|ADJ16142.1| diaminopimelate decarboxylase [Halalkalicoccus jeotgali B3] Length = 409 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 58/381 (15%), Positives = 118/381 (30%), Gaps = 28/381 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D ++ N +++ A K A + TL+ G +S E Sbjct: 24 GTPLYVQDLDRVRENYARMAAAFPE--GRVMYAAKANTAKTVLGTLSDAGAGIECASAGE 81 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVS------QLNKFKDKAQKLH 115 V E Y +A L +I + + A++ Sbjct: 82 VERALAAGCLPERVQYTAVNPP---EADLDYAVSIADDHPELTITAGAEDTIDRLAERGF 138 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCEN- 169 + ++ G + + E +V G+ H Sbjct: 139 SGRLCLRVNPGVGAGHHEKVSTGANAKFGVPIERAPDLLDKADERFDVVGIHAHAGSGIS 198 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224 + ++ + + +E++ +GGG + ++ + +E + Sbjct: 199 GEDLAAHRELVSRMGELARRTDLDLEFVDVGGGFGVPYREGEEPLDLQAVARATREALGE 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYP 283 + +EPG +V + L T V + + +V VD+ + + Sbjct: 259 VEATLAVEPGRYLVADAGVLLTRVNTVKPAGEELVVGVDAGMTTLARPAIYGAHHGIRSL 318 Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 G A V G C +GD+FGE+ + GD ++ + Y + +N P Sbjct: 319 AEGERETVEATVTGPICESGDVFGEYD-LPAPERGDLLAVGNAGAYGYEMASQYNSRPRP 377 Query: 341 TIAVKNVDGTIKAIREFSYND 361 V + + + R + D Sbjct: 378 ATVVVDGENSGVDRRRETLAD 398 >gi|296445377|ref|ZP_06887335.1| diaminopimelate decarboxylase [Methylosinus trichosporium OB3b] gi|296257138|gb|EFH04207.1| diaminopimelate decarboxylase [Methylosinus trichosporium OB3b] Length = 422 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 61/387 (15%), Positives = 103/387 (26%), Gaps = 27/387 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y + + + A+K + + L G S E+ Sbjct: 28 PFYCYSAATIRRHFTVFSAAFAGLDALVCYAVKANSNQAVLALLAGLGAGMDVVSGGELR 87 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK----KIG 119 ++ K + A+ + FN S+ A K I Sbjct: 88 RARAAGVPASKITFSGVGKTAQEIALAIDEGIFCFNVESEPELEAIAAIAAAKGRRAHIS 147 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP V ++ G ++ G+ H + Sbjct: 148 LRVNPDVDAKTHAKISTGLAENKFGVPLSRARDIYAQAARLPGLDIVGVDMHIGSQITDL 207 Query: 173 LCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK------DYPVKDFCQRLKEFSE 223 F A + + I + LGGG+ Y + + ++ Sbjct: 208 RPFDAAFSLLAELVVGLRADGHAISHVDLGGGLGIPYHAGEDPASYHPDRYAEIVRRHMG 267 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++ EPG IV N L T VL + + K VIVD+ + V L I Sbjct: 268 ALGCKLLFEPGRLIVGNAGVLVTRVLYVKQGEAKTFVIVDAGMNDLVRPTLYDAWHEIIP 327 Query: 283 PNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 A V G C GD GD ++ Y + +N Sbjct: 328 VTEPARGRNEILADVVGPVCETGDYIALGRSIPAPAQGDLLAVLTSGAYGAVQAGTYNSR 387 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + S Sbjct: 388 PLIPEVLVDGARWAVVRARPSIESLIA 414 >gi|253990743|ref|YP_003042099.1| diaminopimelate decarboxylase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782193|emb|CAQ85357.1| Diaminopimelate decarboxylase [Photorhabdus asymbiotica] Length = 445 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 56/400 (14%), Positives = 121/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + ++ + + A K + + + +Y + SL E Sbjct: 25 GTPLWVYDSETIIQKIKLLCQFDV-----VRFAQKACSNTHILRLMREYGVKVDAVSLGE 79 Query: 63 VMLG-HEKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + F + D ++ + ++ L + Sbjct: 80 IERALRAGFCPGQAESDIVFTADLIDGPTLQQVTKLGIPVNAGSIDMLEHIGR--YRKGH 137 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 + LRINP + + S+ G +D I + GL H Sbjct: 138 PVWLRINPGFGHGHSQKTNTGGENSKHGIWYQDLPLAIEKIRHYELKLLGLHMHIGSGVD 197 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224 + +++ + ++ I+ IS GGG+ + + + Sbjct: 198 -YQHLASVCDAMVEQVILCGEDIQAISAGGGLSTPYQQGDERINIAHYFGLWDDARKRIE 256 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279 + V++ +EPG +V + L + V + +N V+VD+ + + Sbjct: 257 QHLGHKVELEIEPGRFLVAESGVLMSEVRAVKQMGSRNYVLVDAGFNDLMRPVMYGSYHH 316 Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 +V G C +GD+F + PV++GD + F D Sbjct: 317 ISVLPADGRKIEQLPLQETLVAGPLCESGDVFTQVEGGGVAPRMLPPVQVGDYLVFHDTG 376 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + R + + Sbjct: 377 AYGASMSSNYNSRPLIPEVLFINGKFRLIRRRQTIEELLA 416 >gi|228476511|ref|ZP_04061201.1| diaminopimelate decarboxylase [Streptococcus salivarius SK126] gi|228251932|gb|EEK10978.1| diaminopimelate decarboxylase [Streptococcus salivarius SK126] Length = 417 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 120/393 (30%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 20 PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGCGVDCATDT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKI 118 E+++ + F ++ D + + D + A L + + Sbjct: 80 ELVMSKKIGFDSSAISFTSN--DTRAEEFVYARDINATINLDAYEDIFFLEEAAGLPETL 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCE 168 LR NP +S + S+ G + + K V H Sbjct: 138 SLRFNPGGVFSLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLHAFLASNTVTN 197 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY--- 225 + + + + +++I+L GG+ ++ + E Sbjct: 198 EYYPTLAAQLFELAVEIKNELGVSLDFINLSGGVGVDYTPANKQNDIAVIGEGVHAKFDE 257 Query: 226 --------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 + IY E G + + T VL I + + V VD+S + + Sbjct: 258 ILVPNGLGHISIYTELGRFMTAPHGLVVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAY 317 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F + +IGD + D + + + Sbjct: 318 HHITNMTNPDGDIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DGT + IR + NDY+ L Sbjct: 378 NGRLRSAEILYQEDGTARMIRRAETMNDYFATL 410 >gi|328947721|ref|YP_004365058.1| Diaminopimelate decarboxylase [Treponema succinifaciens DSM 2489] gi|328448045|gb|AEB13761.1| Diaminopimelate decarboxylase [Treponema succinifaciens DSM 2489] Length = 422 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 66/394 (16%), Positives = 117/394 (29%), Gaps = 30/394 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ D++ + N+ A+K + L G SSL Sbjct: 20 PTPFYIYDEKAIRENVKYFYKAFSIFPSFTEYFAVKALPNPYILKVLESEGCGGDCSSLP 79 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKD-KAQKLHKKI 118 E+ML G + E I + ++ ++ K+ KL I Sbjct: 80 ELMLCEKSGITGRRIMFTSNDTPAQEFVYAQKLGAIINLDDITHIDFLKNALGGKLPDTI 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENK---- 170 R NP ++ G + I + + V H + Sbjct: 140 CFRYNPGPLKEGGNSIIGKPEEAKYGLTKEQMIHAYKICKAEGVKHFGIHTMVASNELNP 199 Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224 + + I + IE+ +GGG+ K + + +K +K Sbjct: 200 DFFVDTARIVFELILEVQKECGVNIEFADIGGGVGIPYRPGQKKVDLDYVAKGIKVLYDK 259 Query: 225 YSVQ-------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 V + E G I L T + +N + VD+S+ + + Sbjct: 260 MIVPAGLDPLKLCFECGRPITGPYGWLVTKAIHEKNIYRNYIGVDASMADLMRPGMYGAY 319 Query: 278 SATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 Y V G C D F +++GD + D + Sbjct: 320 HEVTVSGKENAPKDYVYDVSGSLCENCDKFAVQRNLPKIEMGDLLIIHDAGAHGRAMGFN 379 Query: 334 FNGINMPTIAVKNVDGTI-KAIREFSYNDYYNNL 366 +NG + DGT+ + R + DY+ L Sbjct: 380 YNGKLRAGELLLRSDGTVKEIRRRETIEDYFATL 413 >gi|103485699|ref|YP_615260.1| diaminopimelate decarboxylase [Sphingopyxis alaskensis RB2256] gi|98975776|gb|ABF51927.1| diaminopimelate decarboxylase [Sphingopyxis alaskensis RB2256] Length = 419 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 59/375 (15%), Positives = 114/375 (30%), Gaps = 23/375 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I TP Y+ + L + ++ + A+KC G+ L + G S Sbjct: 25 IGTPVYVYSRATLERHAQVFADALRDIPRKHIAFAIKCNPNLGVLRVLARQGYGADVVSG 84 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF----KDKAQKLH 115 E+ E ++ K A + FN + A+++ Sbjct: 85 GELERALAAGMAAEDIVFSGVGKTRAELAQGLDRGIGQFNIEHEPEGVALSEIAVAKEMT 144 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168 + LR+NP V + ++ G + + G+ H + Sbjct: 145 ARAVLRVNPDVDAGTHAKISTGKAENKFGVGIDSAPAIFDRLSALPGLKMRGVALHIGSQ 204 Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEF 221 S A + + + I + LGGG+ + + + Sbjct: 205 LTSLDPLEAAFERVGRLVADLRAAGHSITHVDLGGGLGVPYRPEDNPPTPAEYGAMVARV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 ++ + V + EPG I NT L T VL + + ++ D+++ L Sbjct: 265 TKDWDVTLMFEPGRVIAGNTGVLLTEVLWVKPGATHPFVIVDAAMNDLARPALYDAWHDF 324 Query: 281 IYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + + + G C GD F V+ G F Y + +N + Sbjct: 325 VAVKPTGEKMIASIVGPVCETGDTFARDREIDAVQPGALAVFRTAGAYGATMASTYNSRS 384 Query: 339 MPTIAVKNVDGTIKA 353 + + + D I Sbjct: 385 LVPEVLVDGDRYITV 399 >gi|162447649|ref|YP_001620781.1| diaminopimelate decarboxylase [Acholeplasma laidlawii PG-8A] gi|161985756|gb|ABX81405.1| diaminopimelate decarboxylase [Acholeplasma laidlawii PG-8A] Length = 420 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 66/398 (16%), Positives = 129/398 (32%), Gaps = 36/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D+ + + ++ V ++ A K F M + S Sbjct: 17 QTPLYIYDEAAIRKQCKVFINKFRHPKVSSNVIYASKAFLTIAMAQLIMSEGLHLDCVSQ 76 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-HK 116 E+ F E + K D + A+ TII + + + + Sbjct: 77 GELYTALKAGFPVEKIVLHGNNKTKDELLMALNFRVGTIIVDNDYEASILNEIVNDKYKV 136 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNC 167 + LR+NP + + S+ G D ++ N G H Sbjct: 137 SVMLRVNPGIDAHTHKYIKTSTLDSKFGMSILDPRTKETIKSLNDNPNINFLGTHSHIGS 196 Query: 168 ENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----- 218 + + +LK ++ + ++ ++LGGG + ++ Sbjct: 197 QILEEHSFYDHAITILKFYKEIKELYQIDLKAVNLGGGFGVKYIKSDTRLDLNKVLPELL 256 Query: 219 ------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHVP 270 E +Y+EPG +IV TV I N K + +D ++ H+ Sbjct: 257 EIVYQTANSLEISVPHVYIEPGRSIVAEAGYTLYTVNQIKETINKKKYLFIDGAMNDHMR 316 Query: 271 DYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + T V G++C +GDI E K D + Y Sbjct: 317 TALYQAKYDAFIVGKEDMVHDTTYTVAGKACESGDIIIEDILLPDAKPDDLLVVRTTGAY 376 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + +N + +P + + +R+ S+ D + Sbjct: 377 HYSMASHYNRLTIPPVIFVKDGQSKVVVRKESFMDLLS 414 >gi|288573425|ref|ZP_06391782.1| diaminopimelate decarboxylase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569166|gb|EFC90723.1| diaminopimelate decarboxylase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 426 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 57/399 (14%), Positives = 120/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ + +L + + V++L A K F M + G S Sbjct: 19 GTPLYVMSETELRRRMRAVKRAFSERYEDVEVLYAGKAFLPRAMCALVKSEGLGLDVVSS 78 Query: 61 YEVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +L+ A++ + Sbjct: 79 GEIHTAVSVGFPMERAYFHGNNKTAEDLTMAMDVGVGRFVVDNRDELDLLASMAEERKTE 138 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + R+ P VS + G ++ + G FH Sbjct: 139 VSVLFRLAPGVSGDTHRYIQTAHTDCKFGMPLLGEGLRDCVDTATKAPYVKLLGFHFHVG 198 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---------- 212 + + ++ + + +++GGGI + Sbjct: 199 SQLMENRAYLEALEVLGDLMKTLREENGFETKELNIGGGIGIPYGKGQREVDLDFFLGCI 258 Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +R+ ++ +EPG I + V + E V + + Sbjct: 259 VETAERICSERGMARPRLVIEPGRWIAGPSGITLYRVGTVKEIPGIRTYVSVDGGMADNP 318 Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + + V GR C +GDI + + GD ++ D Sbjct: 319 RPSLYQAEYRCVLANRLDDPADSVVTVAGRCCESGDILIKDAELPLPERGDVVAVFDTGA 378 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + P + + + S++D Sbjct: 379 YNFSMASGYNRLRRPAVVLVKDGEARCIVERQSFDDLIK 417 >gi|332826772|gb|EGJ99589.1| diaminopimelate decarboxylase [Dysgonomonas gadei ATCC BAA-286] Length = 385 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 68/371 (18%), Positives = 121/371 (32%), Gaps = 25/371 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP+Y D L L K G A+K A + + + G S Sbjct: 14 IETPFYYYDMDLLKRTLKIVKEETKKYGFVQHYAVKANANRRILELIASEGFGADCVSGN 73 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 EV + F + K + A+ N ++ +L + A K K Sbjct: 74 EVKAAVNAGFPASKIVFAGVGKTDKEINLALDLNIFCFNVESLPELEVINELASKKGKLA 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169 ++ LRINP+V ++ G + + + G+ FH + Sbjct: 134 QVALRINPNVDAHTHEYITTGLNENKFGFAMAHLDAVIEKLKSLKAIKLIGIHFHIGSQI 193 Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-------K 219 + F + + + + F ++E I+LGGG+ ++ K Sbjct: 194 EEAETFEPLCERVNELQVYFEEKEIKLEHINLGGGLGIDYENPDAHPVSDFAGYFALFNK 253 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276 + + E G +IV L T + K VIVD+ + + L Y Sbjct: 254 SLKLRDGQIAHFELGRSIVAQCGALVTRTTYVKHGENKVFVIVDAGMTDLIRPALYQAYH 313 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + I N V G C + D+F + + + GD + Y + +N Sbjct: 314 KIENISSNLTVKKYDVVGPICESSDVFAKDYELNETQRGDILVLRSAGAYGEIMASQYNC 373 Query: 337 INMPTIAVKNV 347 +P + Sbjct: 374 RELPKPYYSDK 384 >gi|212709365|ref|ZP_03317493.1| hypothetical protein PROVALCAL_00401 [Providencia alcalifaciens DSM 30120] gi|212688277|gb|EEB47805.1| hypothetical protein PROVALCAL_00401 [Providencia alcalifaciens DSM 30120] Length = 419 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 124/400 (31%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + +++ + + A K + + + + S SL E Sbjct: 25 GTPVWVYDSEVIIDRIGQLK-AFD----TVRFAQKACSNIHILRLMREQGVKVDSVSLGE 79 Query: 63 VMLGH-EKFGGET----HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + F + D ++ D + ++ L + + K Sbjct: 80 IERALVAGFQPGREKSEIVFTADVLDPATLLKVTELDIPVNAGSIDMLQQIGE--HKAGH 137 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 + LRINP + + S+ G +D I+ + G+ H Sbjct: 138 PVWLRINPGFGHGHSQKTNTGGENSKHGIWHQDLPEALAKIQQYNLKLVGIHMHIGSGVD 197 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224 + + + ++ + I+ IS GGG+ +++ Q + Sbjct: 198 -YQHLANVCDSMVELVVSAGVDIDAISAGGGLSTPYREHDEIIDVQHYYSLWDNARQRIE 256 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279 + +++ +EPG +V + L V + ++ V+VDS + + Sbjct: 257 LHLGHHIELEIEPGRYLVAESGVLLAQVRAVKDMGSRHYVLVDSGFNDLMRPAMYGSYHH 316 Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVA 324 +V G C +GD+F E VK+GD + F D Sbjct: 317 ISVLPADGSSVDSQPLKETIVAGPLCESGDVFTQLEGGMVETRLLPDVKVGDYLVFHDTG 376 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + R + + Sbjct: 377 AYGASMSSNYNSRPLLPEVLFVDGKPTLIRRRQTIQELLA 416 >gi|208779489|ref|ZP_03246834.1| diaminopimelate decarboxylase [Francisella novicida FTG] gi|208744450|gb|EDZ90749.1| diaminopimelate decarboxylase [Francisella novicida FTG] Length = 394 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 64/372 (17%), Positives = 120/372 (32%), Gaps = 30/372 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D + L + A ++ A+K + D +Y G S Sbjct: 23 TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVDIAKKYGMGIDCVSGG 82 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117 E+ E K + + K + + D FN+ S AQ+ +K+ Sbjct: 83 EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 142 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168 I LR+NP++ + + G D + N+ GL +H + Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 202 Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 ++ F K I+ I+ GGG+ + R + Sbjct: 203 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262 Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277 EF E ++ E G ++V + L + VL + VI+D+ + + L + Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 322 Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G C + D+F +++ +K GD ++ Y + Sbjct: 323 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 382 Query: 334 FNGINMPTIAVK 345 +N Sbjct: 383 YNLRPSVQEYFI 394 >gi|302529808|ref|ZP_07282150.1| diaminopimelate decarboxylase [Streptomyces sp. AA4] gi|302438703|gb|EFL10519.1| diaminopimelate decarboxylase [Streptomyces sp. AA4] Length = 479 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 55/414 (13%), Positives = 120/414 (28%), Gaps = 53/414 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + + + A K F + + + + S E Sbjct: 64 GTPLFVVDEADFKSRCADYAEAFDDP-ALVHYASKAFLSVEVARWVAEQGLSLDVCSGGE 122 Query: 63 VMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F E ++ K AV + T++ ++ ++ + + A ++ +K Sbjct: 123 LAVALRANFPVERITFHGNNKSVAELDAAVEAGVGTVVVDSYYEIARLAEIAAAHEIEQK 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + + + + GL H + Sbjct: 183 VLVRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNAPSLKLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLKNIEKEFG--------HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + + Q+ + LGGG + ++ Sbjct: 243 IFDADGFEVAARRVVGLLADLAKEHGPELLEQMNVVDLGGGFGIAYTEKDNPPPPSQMIT 302 Query: 221 FSEKYSVQIYL-----------EPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 + + EPG AI T V I + + V VD Sbjct: 303 QIREIVRKECAYAELPVPRIAGEPGRAIAGPGTFTLYEVGTIKDVALGDETARRYVSVDG 362 Query: 264 SVEAHVPDYLLYQESATIY------------PNTGPYTAMVCGRSCLAGDIFGEFHFEKP 311 + ++ L P + V G+ C +GDI + Sbjct: 363 GMSDNIRTALYDAVYDCRVVSRSASDTADGDDPATPTLSRVVGKHCESGDIVVRDCWLPD 422 Query: 312 -VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + GD ++ Y + +N + P + +R + +D Sbjct: 423 TLAPGDLLAVAATGAYCYAMASGYNRLPRPAVVAVRNGSARLLLRRETTDDMLR 476 >gi|256372577|ref|YP_003110401.1| diaminopimelate decarboxylase [Acidimicrobium ferrooxidans DSM 10331] gi|256009161|gb|ACU54728.1| diaminopimelate decarboxylase [Acidimicrobium ferrooxidans DSM 10331] Length = 426 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 118/387 (30%), Gaps = 30/387 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D+ ++ +D +++ A K F+A M + ++S E Sbjct: 40 GTPLFVYDEDEVRARIDELRSGLGA--LQVTYASKAFSAVAMARIVADTGLWWDAASAGE 97 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E + K D + A I+ + +L + +++ Sbjct: 98 LEAARRGGVPAERIVLHGNNKGVDELLLADEVGVGRIVVDAHEELERIARL-GLGRRRLW 156 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKS 171 LR+ P + + S+ G + D + V G+ H + Sbjct: 157 LRVVPGIEAHTHAFVRTGQVDSKFGLQLDDGSAERALTWARAHGLTVVGIHAHIGSQIFD 216 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-------YPVKDFCQRLKEFSEK 224 F + + + ++ +SLGGGI + Sbjct: 217 LDPFGELAGRMGAVREAWG--VDEVSLGGGIGVPYVRDERAPTLEEWGRSIAEATTLAGM 274 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQESATIY 282 + ++EPG A+V V + V + + L + Sbjct: 275 DPERTFVEPGRALVAPAAITLYRVGVVKRIPGVRTYVAVDGGMSDNPRPVLYGSGYEAVA 334 Query: 283 --PNTGPYT--AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 P+T V G+ C +GD+ + G+ I Y + + +N + Sbjct: 335 AGRLEAPHTTAMRVVGKHCESGDVLVANALLPEDLAAGELIVTPVTGAYGYSMGSNYNRL 394 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 P++ + + +R +D + Sbjct: 395 PRPSVVMVRDGVAREIVRREQLDDLFR 421 >gi|317497192|ref|ZP_07955517.1| diaminopimelate decarboxylase [Lachnospiraceae bacterium 5_1_63FAA] gi|316895518|gb|EFV17675.1| diaminopimelate decarboxylase [Lachnospiraceae bacterium 5_1_63FAA] Length = 416 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 112/391 (28%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + GT SSL Sbjct: 20 PTPFHLYDEKGIRETARGLYKAFSWNKGFKEYFAVKATPNPTILKILKEEGCGTDCSSLT 79 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G ++ E TI + ++ + K+ A K Sbjct: 80 ELMMSDRCGFDGSEIMFSSNDTPAEEFILAKQLGATINLDDITHIEFLKECAGIPEKISC 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFH------NNCEN 169 V + D ++ G + E+ + V H Sbjct: 140 RYNPGGVFALGTDIMDNPG-DAKYGMTTEQIFEAFKQLKELGVKEFGIHSFLASNTVTNE 198 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + K I +I+L GG+ + + E K + Sbjct: 199 YYPTLAKQLFELAVKLKEEVGVHIGFINLSGGVGIPYLPDQEGNDIAVIGEGVHKVYDEV 258 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T + K + VD+ + + Sbjct: 259 LVPAGMGDVKIFTELGRYMLAPNGHLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 318 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + G C D F + IGD + D + + Sbjct: 319 HITVMGKENEPADHVYDITGSLCENNDKFAIDRKLPKIDIGDLLVIHDTGAHGFAMGYNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DGT + IR + DY+ Sbjct: 379 NGKLKSAEILLKEDGTTEMIRRAETPEDYFA 409 >gi|227542589|ref|ZP_03972638.1| diaminopimelate decarboxylase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181787|gb|EEI62759.1| diaminopimelate decarboxylase [Corynebacterium glucuronolyticum ATCC 51866] Length = 463 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 60/403 (14%), Positives = 116/403 (28%), Gaps = 42/403 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + + A K F + +N +SL E Sbjct: 61 GTPLFVVDEDDFRSRCQAMAAAFGAEN--VHYAAKAFLTKAIARWVNDEGLHLDVASLGE 118 Query: 63 VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F E + K V S T++ + ++ D+A Sbjct: 119 LQVALATGFPAERITAHGNNKTVAYMDKIVSSGVGTVVLDAPGEIGLLNDRAALAGVTQN 178 Query: 120 LRIN--PSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + + P + + + G C+ +++ ++ GL H + Sbjct: 179 VMVRVKPGIEAHTHEMIATAHEDQKFGFSLASGSAYVACEKALDAVHLDLVGLHCHVGSQ 238 Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF--------CQ 216 FS + + F + + LGGG + Sbjct: 239 VFDAEGFSQAAERVLTLFVKLHDERRVTLTTLDLGGGFGIAYTAHSRPLCVEDVAEDLIA 298 Query: 217 RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267 R++ EK + +I +EPG +I TT V + + + Sbjct: 299 RVQRRCEKLNLDVPRIMVEPGRSIAGPTTVTVYEVGQVKDVHVTDTQTRRYVAVDGGMSD 358 Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFED 322 ++ L E N P V G C +GDI V GD ++ Sbjct: 359 NLRPALYQAEYDLRLVNRSASGAPIPTRVVGSHCESGDILITNEAYPDDVATGDLVATAA 418 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +N + P + ++ + D N Sbjct: 419 TGAYCYAMSSRYNMMLRPAVVSVKDGKARLMVKRETIEDVLEN 461 >gi|291543687|emb|CBL16796.1| Diaminopimelate decarboxylase [Ruminococcus sp. 18P13] Length = 419 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 113/391 (28%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+YL D++ + N N G + A+K + L + G SSL Sbjct: 19 PTPFYLYDEKGIRENARKLKQAFAWNKGYREYFAVKATPNPFILKILQEEGCGVDCSSLT 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G ++ + I + ++ ++ + A Sbjct: 79 ELMMSEACGFSGSDIMFSSNVTPAEDFKLAKKLGAYINLDDITHIDFLEQVAGLPETIFC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFH------NNCEN 169 + + D ++ G + I+ K V H Sbjct: 139 RYNPGGHFEIETHVMDNPG-EAKYGFTTQQLIDGFKILMQKGVKHFGLHAFLASNTVTNA 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-----------QRL 218 + + I +++L GG+ + + + + Sbjct: 198 YYPKLARVLFETAVMLKKETGADIRFVNLSGGVGIPYRPEQEPNDILAIGEGVRQAFEEI 257 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + V I+ E G ++ L T + K + VD+ + + Sbjct: 258 MVPAGLGDVAIFTELGRFMLGPYGNLITKAVHEKHIYKEYIGVDACAANLMRPAIYGAYH 317 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + +GD ++ D + + + Sbjct: 318 HITVLGKENAPCDHKYDVTGGLCENNDKFAVDRMLPKIDMGDYLAIHDAGAHGFSMGYNY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+ K IR + DY+ Sbjct: 378 NGKLRSAEILLCEDGSFKLIRRAETPADYFA 408 >gi|269216542|ref|ZP_06160396.1| diaminopimelate decarboxylase [Slackia exigua ATCC 700122] gi|269130071|gb|EEZ61153.1| diaminopimelate decarboxylase [Slackia exigua ATCC 700122] Length = 475 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 61/393 (15%), Positives = 123/393 (31%), Gaps = 29/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+ + N+++ + N G + A+K + + L +Y G SS Sbjct: 71 PTPFHLYDEAGIRRNIESLVRAFSWNPGFREYFAVKATPNPFIIEILQEYGCGCDCSSYA 130 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L G ++ + + TI + ++ ++ + ++ K I Sbjct: 131 ELVLADACGAHGSDIMFSSNETPEEDFRLASQLGATINLDDITHIDVLESVIGRIPKTIS 190 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI------ESEIKNVNGLMFHNNCEN---- 169 R NP ++ N ++ G I +++ G+ Sbjct: 191 CRYNPGGTFEVANGIMDNPGDAKYGMTDDQFIEAFRILKAKGAKEFGIHAFLASNTVTNE 250 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + I +I+L GGI + + + E + I Sbjct: 251 YYPKLAGILFDVAVRVAREADVHIGFINLSGGIGIPYTPDQEPNDIEAIGEGVRRKFEDI 310 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G + L T + K+ + VD+ + + Sbjct: 311 LVPAGMGDVALFTELGRFVTGPYGCLITRAIREKHTYKDYIGVDACAANLMRPAIYGAYH 370 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 +T + G C D F + GD + D + + Sbjct: 371 HITVLGKEAAERDHTYDIVGGLCENNDKFAVDRALPRIDRGDLLVIHDAGAHGHAMGYNY 430 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG++K IR + DY+ L Sbjct: 431 NGRLRSAELLLRPDGSVKLIRRAETTQDYFATL 463 >gi|172063790|ref|YP_001811441.1| diaminopimelate decarboxylase [Burkholderia ambifaria MC40-6] gi|171996307|gb|ACB67225.1| diaminopimelate decarboxylase [Burkholderia ambifaria MC40-6] Length = 417 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 59/405 (14%), Positives = 120/405 (29%), Gaps = 51/405 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + SL E Sbjct: 16 GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNLHILKLMRDERVCVDAVSLGE 70 Query: 63 VMLGHEKF----------GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKA 111 + E + D A + + T+ ++ L + + A Sbjct: 71 IERSLAAGFSPAGGPASGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARVGEHA 130 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHN 165 ++ LR+NP + + P S+ G D + + G+ H Sbjct: 131 --PGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHI 188 Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQ 216 + S + + IE IS GGG+ Y + Sbjct: 189 GSGVD-YGHLSQVCDAMVDLVTSLGHDIEAISAGGGLSIPYRDGEPRVDVGHYFSQWDAA 247 Query: 217 RLKEFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLL 274 R + ++V+I +EPG +V TL T V ++ K+ + +D+ + + Sbjct: 248 RKRIERHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNHRPKHDFVLIDAGFNDLMRPSMY 307 Query: 275 YQESATIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRIS 319 A + G C +GD+F + +IGD + Sbjct: 308 GSYHAVSVHAPDGALPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLF 367 Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 D Y + + +N + + + R + + Sbjct: 368 LHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 412 >gi|329729353|gb|EGG65759.1| diaminopimelate decarboxylase [Staphylococcus epidermidis VCU144] Length = 421 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 55/394 (13%), Positives = 119/394 (30%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ N + + +G + A K F M +++ S Sbjct: 26 GTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCIQMVKLIDEENLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F + ++ K + + +T+ ++ A + Sbjct: 86 GELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVDTLEEIELIDKYADS-NVD 144 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G K ++ + G+ FH + Sbjct: 145 VVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVNKVKATKHLQLKGIHFHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------R 217 + K + ++ +++GGG + + Sbjct: 205 IEGTEAMIKTAKIVLNWLASERIEVSLLNIGGGFGIKYVEGDESFPIEQGISEITEAIKE 264 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275 + + +I +EPG +IV V I + V + H+ L Sbjct: 265 TAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSVDGGMSDHIRTALYG 324 Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRK 331 + + + + G+ C +GDI V GD ++ Y+ + Sbjct: 325 AQYEALLVNRNEKANESVTIAGKLCESGDIIVRDARLPSSVHRGDYLAVLSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + + + I+ S N Sbjct: 385 SNYNQMQKSPVFFLKDGKAREVIKRQSLRQLIIN 418 >gi|254373451|ref|ZP_04988939.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida GA99-3549] gi|151571177|gb|EDN36831.1| diaminopimelate decarboxylase [Francisella novicida GA99-3549] Length = 394 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 64/372 (17%), Positives = 119/372 (31%), Gaps = 30/372 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D + L + A ++ A+K + D +Y G S Sbjct: 23 TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVDIAKKYGMGIDCVSGG 82 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHK-- 116 E+ E K + + K + + D FN+ S AQ+ +K Sbjct: 83 EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKKV 142 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168 I LR+NP++ + + G D + N+ GL +H + Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 202 Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 ++ F K I+ I+ GGG+ + R + Sbjct: 203 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262 Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277 EF E ++ E G ++V + L + VL + VI+D+ + + L + Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 322 Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G C + D+F +++ +K GD ++ Y + Sbjct: 323 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 382 Query: 334 FNGINMPTIAVK 345 +N Sbjct: 383 YNLRPSVQEYFI 394 >gi|218437837|ref|YP_002376166.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7424] gi|218170565|gb|ACK69298.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7424] Length = 477 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 50/404 (12%), Positives = 113/404 (27%), Gaps = 42/404 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L G +++ A K ++ + + G S Sbjct: 60 GSPLYILDEYTLRTACKQYREAFIKYYPGQSQVIYASKAWSCMAVCAVIASEGLGFDVVS 119 Query: 60 LYEV--------MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDK 110 E+ +G ++ K + I+ + +L Sbjct: 120 GGELYTTLQTLEQMGLGDDIATKIYFHGNNKSVTELQFALSVGCTIMVDNWLELETLVKL 179 Query: 111 ---AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNG 160 + +I LR+ P + ++ G E I N G Sbjct: 180 GANLGEKSVRIMLRLTPGIECHTHEYIRTGHLDNKFGFDPHQLEAVLTYVSEHSIFNCIG 239 Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 + H + + + I+ +++GGG+ + + Sbjct: 240 IHAHIGSQIFETQPHHDLAGVLVGYLKSAIAKGLPIQELNVGGGLGIRYTEKDDPPAIEE 299 Query: 218 LKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS-- 264 + ++ EPG +++ + TV E + + Sbjct: 300 WVKNVATAIVKACEAEQIPLPKLIAEPGRSLIGSACITAYTVGSRKEIPELRTYIAVDGG 359 Query: 265 VEAHVPDYLL---YQES-ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + + Y+ A T + G+ C +GDI + + GD + Sbjct: 360 MSDNPRPITYQSLYRAIIANRMSTPQSETVTIAGKHCESGDILIKDALLPKAEPGDILVV 419 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + P + + ++ +Y D Sbjct: 420 MGTGAYNYSMASNYNRLPRPAAVLVHQGEANLILKRETYEDLLR 463 >gi|296127489|ref|YP_003634741.1| diaminopimelate decarboxylase [Brachyspira murdochii DSM 12563] gi|296019305|gb|ADG72542.1| diaminopimelate decarboxylase [Brachyspira murdochii DSM 12563] Length = 412 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 125/387 (32%), Gaps = 23/387 (5%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + +P+YL K +L + I + V + A+K + + + G S Sbjct: 22 VYGSPFYLYSKNDILQKIRFLKDIFSSLDDVLIAYAVKAENNLSILKMMVEEGIGADVVS 81 Query: 60 LYE-VMLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E + ++ ++ ++ N ++ + + + A++L K Sbjct: 82 IGESLKYIKAGGDARNIVFSGVAKTEEEIKKSIELNIKRFNIESIPEAVRINNIAKELKK 141 Query: 117 K--IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNC 167 + +R+NP+V ++ G K IE+ + + L H Sbjct: 142 RVKCSIRVNPNVDAHTHEKITTGVNGNKFGVCIKTIIENSNLLKSLDNIEIESLSMHIGS 201 Query: 168 ENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220 + F + + I I +GGG + F Sbjct: 202 QMTDAEPFYRAILVMRDLINEVNSMGFNITDIDIGGGYGVRYNKDHSGFDFDKFKNESIN 261 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--YQE 277 ++ ++++ EPG V + L V + E + ++ D + +V + Y E Sbjct: 262 LLKEMNLKVTTEPGRYFVAESGALIMRVEYVKEELGRKYVILDGGMNDYVRVAMYDAYNE 321 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G C + D F V+ GD ++ D Y + + +N Sbjct: 322 IYPLVKRESVSNYDFVGPICESSDFFAYDRECSVVEEGDYVALLDAGAYGFSMSSNYNSR 381 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D + ++N+ Sbjct: 382 PLIAQVMADKDKHYIIRKRQTFNEMIE 408 >gi|68171181|ref|ZP_00544588.1| Diaminopimelate decarboxylase [Ehrlichia chaffeensis str. Sapulpa] gi|88658344|ref|YP_507301.1| diaminopimelate decarboxylase [Ehrlichia chaffeensis str. Arkansas] gi|67999412|gb|EAM86054.1| Diaminopimelate decarboxylase [Ehrlichia chaffeensis str. Sapulpa] gi|88599801|gb|ABD45270.1| diaminopimelate decarboxylase [Ehrlichia chaffeensis str. Arkansas] Length = 420 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y + NN N + A+K + + LN G S Sbjct: 30 VGTPVYCYSLNAIKNNYRQFQENLPN-NSIVCYAVKSNSNLSILSLLNSLGAGADVVSEG 88 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 E+ ++ K + + ++ +L+ A + + Sbjct: 89 EIRRAIAAGISPNKIVFSGVGKTEQEINFALDNRILQFNVESIEELSLINTIACQKNIIA 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIESEIKNVN--GLMFHNNCEN-- 169 + +RINP+++ ++ G + + G+ H + Sbjct: 149 PVSIRINPNINADTNDKITTGLKVNKFGIPEELLDQIFNKDFTWIKIIGISVHIGSQISN 208 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEFSEK 224 F +K I K F TQI + LGGG+ K + LK+ E Sbjct: 209 LHIFQNTIDKIKKIIKIFKQHNTQIIRVDLGGGLGIPYKSSDTFPTIQEYANLLKKNFEN 268 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283 + QI EPG A+V NT L T VL N + I+ D+ + + L E I Sbjct: 269 ENYQIICEPGRALVGNTGILLTKVLYRKYNQEKSHIILDAGMNDLIRPALYNAEHTIIPA 328 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G C + D F + ++ G+ ++ Y + + +N + Sbjct: 329 ISSTSTQLQPCDIVGPICESDDTFAHNYHIHNLQNGEIVAICTAGAYGSSMSSNYNSRLL 388 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + N +Y D Sbjct: 389 IPEVMVNNSSYDIIRSRQTYEDMLK 413 >gi|312868226|ref|ZP_07728426.1| putative diaminopimelate decarboxylase [Streptococcus parasanguinis F0405] gi|311095971|gb|EFQ54215.1| putative diaminopimelate decarboxylase [Streptococcus parasanguinis F0405] Length = 416 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+ + N G K A+K + L + G ++S Sbjct: 19 PTPFHLYDEAGIRETARALHQAFAWNEGFKEYFAIKATPNPSILKILQEEGCGVDTASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K Sbjct: 79 ELLMADKLGFSGKEIMFSSNNTPADEFVYARELGATINLDAYEDIAFLKSVTGIPKVISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169 V + D ++ G + I++ + V H + Sbjct: 139 RYNPGGVFELGTDIMDNP-EEAKFGMTKEQLIQAFIELKELGVEEFGIHALLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---- 225 + + + + +I+L GG+ K + + E + Sbjct: 198 YYPELARQLFELAVEVVEKTGVHLGFINLSGGVGVNYKPEQEPNDIAIIGEGVHRVFDEI 257 Query: 226 -------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 V+IY E G ++ + L T V + + V VD+S + + Sbjct: 258 LKPAGLGHVKIYTELGRFMLASHGLLVTRVTHKKKTYRTYVGVDASAVNLLRPAMYGAYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F + +IGD + D + + +N Sbjct: 318 HITNMDRPEGPTEVVDVVGSLCENNDKFAKQRELPVTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + DG + IR DY L Sbjct: 378 AKLRSAEVLLQEDGQARLIRRAEKPEDYLATL 409 >gi|296875968|ref|ZP_06900027.1| diaminopimelate decarboxylase [Streptococcus parasanguinis ATCC 15912] gi|322390075|ref|ZP_08063610.1| diaminopimelate decarboxylase [Streptococcus parasanguinis ATCC 903] gi|296433043|gb|EFH18831.1| diaminopimelate decarboxylase [Streptococcus parasanguinis ATCC 15912] gi|321143202|gb|EFX38645.1| diaminopimelate decarboxylase [Streptococcus parasanguinis ATCC 903] Length = 416 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+ + N G K A+K + L + G ++S Sbjct: 19 PTPFHLYDEAGIRETARALHQAFAWNEGFKEYFAIKATPNPSILKILQEEGCGVDTASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K Sbjct: 79 ELLMADKLGFSGKEIMFSSNNTPADEFVYARELGATINLDAYEDIAFLKSVTSIPKVISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169 V + D ++ G + I++ + V H + Sbjct: 139 RYNPGGVFELGTDIMDNP-EEAKFGMTKEQLIQAFIELKELGVEEFGIHALLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---- 225 + + + + +I+L GG+ K + + E + Sbjct: 198 YYPELARQLFELAVEVVEKTGVHLGFINLSGGVGVNYKPEQEPNDIAIIGEGVHRVFDEI 257 Query: 226 -------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 V+IY E G ++ + L T V + + V VD+S + + Sbjct: 258 LKPAGLGHVKIYTELGRFMLASHGLLVTRVTHKKKTYRTYVGVDASAVNLLRPAMYGAYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F + +IGD + D + + +N Sbjct: 318 HITNMDRPDGPTEVVDVVGSLCENNDKFAKQRELPVTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + DG + IR DY L Sbjct: 378 AKLRSAEVLLQEDGQARLIRRAEKPEDYLATL 409 >gi|29726282|pdb|1HKW|A Chain A, Mycobacterium Diaminopimelate Dicarboxylase (Lysa) gi|29726283|pdb|1HKW|B Chain B, Mycobacterium Diaminopimelate Dicarboxylase (Lysa) Length = 453 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 119/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + +G + A K F + +++ + E Sbjct: 39 GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 97 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + K AV + I+ ++ +++ + A + + Sbjct: 98 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSXTEIERLDAIAGEAGIVQD 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVNGLMFHNNCE 168 + +R+ V + G + + GL H + Sbjct: 158 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAXAAVRRVFATDHLRLVGLHSHIGSQ 217 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + G F + I + LGGG+ + L Sbjct: 218 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 277 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + ++ +EPG AI T V + + + Sbjct: 278 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 337 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 ++ L + + + P A + G+ C +GDI + ++ GD + Sbjct: 338 GXSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 397 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + +D + Sbjct: 398 AVAATGAYCYSLSSRYNXVGRPAVVAVHAGNARLVLRRETVDDLLS 443 >gi|332883591|gb|EGK03872.1| diaminopimelate decarboxylase [Dysgonomonas mossii DSM 22836] Length = 385 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 67/371 (18%), Positives = 120/371 (32%), Gaps = 25/371 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP+Y D L L K G A+K A + + + G S Sbjct: 14 IETPFYYYDTDLLKRTLKIVKEETKKYGFIQHYAIKANANRRILELIASEGFGADCVSGN 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 EV F + K + A+ N ++ +L + A + Sbjct: 74 EVKAAITAGFPASKIVFAGVGKTDKEINLALDLNIFCFNVESMPELVVLNELAAKKGKTA 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCEN 169 ++ LRINP+V ++ G + + + G+ FH + Sbjct: 134 QVALRINPNVDAHTHEYITTGLNENKFGFSMAHLDNAIEVLKSLKNLKLIGIHFHIGSQI 193 Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 +F + ++ F ++E I++GGG +D + F + Sbjct: 194 EDVHTFDPLCDRINELQDLFEAKGMKLENINVGGGFGIDYEDPDANPISDFQRYFELFHK 253 Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES 278 ++ E G AIV +L T V + K VIVD+ + + L Sbjct: 254 GLKLRDGQVVHFELGRAIVAQCGSLVTKVTYVKHGESKTFVIVDAGMTDLIRPALYQAYH 313 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 I + V G C + D+F + + K GD + Y + +N Sbjct: 314 KVENISSDLPIQKYDVVGPICESSDVFVKDYELNESKRGDLLVLRSAGAYGEIMASQYNC 373 Query: 337 INMPTIAVKNV 347 ++P + Sbjct: 374 RDIPKSYFSDK 384 >gi|281491804|ref|YP_003353784.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis KF147] gi|281375518|gb|ADA65028.1| Diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis KF147] Length = 419 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 66/394 (16%), Positives = 123/394 (31%), Gaps = 30/394 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L++ G +S Sbjct: 19 PTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGCGVDCASYV 78 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-I 118 E++L F G ++ E TI + + K+ + + + Sbjct: 79 ELLLSEKCGFDGSEMMFSSNDTPAEEFQFANQLGATINLDAYEDIEFLKNLTDFIFPETM 138 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN--- 169 LR NP ++ N S+ G I+ + V G+ Sbjct: 139 SLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKKFGMHSFLASNTVTN 198 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 S + K + +++I+L GGI + + ++ + + + Sbjct: 199 DYYPELASKLFKLALEIREETGITLDFINLSGGIGVNYRPDEEANDIAKIGQGVHEAYDE 258 Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 IY E G ++ L T VL + E + V VD+S + Sbjct: 259 VLSANGIENLKIYTELGRFMLAPHGHLITKVLHLKETYRKYVGVDASAVNLMRPAFYDAY 318 Query: 278 SATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G C D F + ++IGD + D + + Sbjct: 319 HHITVAGKENGEATEIYDITGSLCENNDKFAKERAFPKIEIGDLLVIHDTGAHGFSMGYQ 378 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +N + + DG + IR DY+ L Sbjct: 379 YNAKLRSSEVLLQEDGKTRLIRRAEKPADYFATL 412 >gi|218133732|ref|ZP_03462536.1| hypothetical protein BACPEC_01601 [Bacteroides pectinophilus ATCC 43243] gi|217991107|gb|EEC57113.1| hypothetical protein BACPEC_01601 [Bacteroides pectinophilus ATCC 43243] Length = 430 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 126/391 (32%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G + A+K + + L Y G SSL Sbjct: 28 PTPFHLYDEKGIRENASKLKEAFAWNKGYREYFAVKATPNPFILNILKDYDCGCDCSSLT 87 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G++ ++ E A I + ++ ++ + ++ + I Sbjct: 88 ELMMADRLDFDGKSIMFSSNDTPAEEFAYADKVGAIINLDDITHIDFLEKTIGRIPETIS 147 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 R NP + N S+ G + IE+ + ++ L + Sbjct: 148 CRYNPGGYFKLGNSIMDNPGDSKYGMTHEQIIEAFKILKSKGAKNFGIHAFLASNTVTNE 207 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + I++I+L GGI + + K + Sbjct: 208 YYPALARILFELAVELHEKTGADIKFINLSGGIGIPYTPDKEPNDISVIGANVHKVYDEV 267 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + K + VD+ + + Sbjct: 268 LTANGMGDVAIYTELGRFMLAPYGCLVTKAIHEKHTYKEYIGVDACAANLMRPAMYGAYH 327 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + G C D F + +GD + D + + + Sbjct: 328 HITVAGKENAPCDHKYDITGSLCENNDKFAIDRMLPKIDMGDYLIIHDTGAHGFSMGYNY 387 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + + DG+++ IR + DY+ Sbjct: 388 NGRLRSSELLLKEDGSVQMIRRAETPKDYFA 418 >gi|325265039|ref|ZP_08131766.1| protein TabA [Clostridium sp. D5] gi|324029729|gb|EGB91017.1| protein TabA [Clostridium sp. D5] Length = 428 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 120/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N+ N G K A+K + D L +Y G SS Sbjct: 20 PTPFHLYDEKGIRENVKALKEAFSWNPGYKEYFAVKATPNPFLIDILKEYGCGCDCSSYT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML GE ++ E I + ++ ++ + + + I Sbjct: 80 ELMLSDAVGIRGEDIMFSSNDTPAEEFILADKLGAIINLDDITHIDFLEQTIGHIPEVIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCEN---- 169 R NP + N S+ G ++ + G+ Sbjct: 140 CRYNPGGLFKISNDIMDNPGDSKYGMTTPQMYEAFKILKEKGAKEFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + I +I+L GGI + + + + + + + Sbjct: 200 YYPMLAKVLFEQAVSLQKETGVHISFINLSGGIGIPYRPGQEPNDIRIIGDGVRRVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + K + VD+ + + Sbjct: 260 LVPAGMGDVAIYTELGRYMMGPYGCLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F V++GD + D + + + Sbjct: 320 HITVMGKEDWPCDHKYDVSGSLCENNDKFAIDRMLPEVEMGDYLVIHDTGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+ + IR + DY+ Sbjct: 380 NGKLKSAEVLLKEDGSAQLIRRAETPADYFA 410 >gi|307295072|ref|ZP_07574914.1| diaminopimelate decarboxylase [Sphingobium chlorophenolicum L-1] gi|306879546|gb|EFN10764.1| diaminopimelate decarboxylase [Sphingobium chlorophenolicum L-1] Length = 421 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 61/387 (15%), Positives = 113/387 (29%), Gaps = 24/387 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP Y+ L ++ A + A+K + TL + G S Sbjct: 25 VGTPVYIYSTATLTRHVGVFREGLSQLADPLIAFAVKANPNAAVLATLGRLGLGADVVSA 84 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E++ ++ K D A+ + + + A + Sbjct: 85 GELLRAIAAGIPANRIVFSGVGKTADEMRIALEQGIYQFNLESEPEAEMLSEVALSMGRR 144 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168 + RINP V + ++ G + S +V G+ H + Sbjct: 145 APVAYRINPDVDAGTHAKISTGKSENKFGIPYDRALASYAAARDLPGLDVQGVAVHIGSQ 204 Query: 169 NKSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKE 220 A + ++ I LGGG+ D+ + Sbjct: 205 LTDLKPLEAAFVKVGALIEKLREAGHDIRTADLGGGLGVPYDPSQPLPPSPADYGAMVTR 264 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 ++ ++V++ EPG IV N L + V+ + + VIVD+++ + L Sbjct: 265 ITQGWNVRLLFEPGRLIVGNAGVLLSQVVRVKQGAQAPFVIVDAAMNDLLRPSLYDAWHD 324 Query: 280 TIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 A V G C GD F V GD ++F Y + +N Sbjct: 325 IRAVQPKGDRAAANVVGPVCETGDTFAMHRDMDVVGAGDLVAFMTAGAYGATMASTYNSR 384 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + D Sbjct: 385 ALTPEVLVSGDKWAVVRARPPIETLIQ 411 >gi|312898393|ref|ZP_07757783.1| putative diaminopimelate decarboxylase [Megasphaera micronuciformis F0359] gi|310620312|gb|EFQ03882.1| putative diaminopimelate decarboxylase [Megasphaera micronuciformis F0359] Length = 417 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 66/392 (16%), Positives = 122/392 (31%), Gaps = 28/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N+ + A K A+K + L G SSL Sbjct: 21 PTPFHIYDEEAIRANVRKLIKAFDWAKDFKEYFAVKATPNPYIMKILKAEGVGADCSSLP 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E++L G+ ++ + A II + F + + +I + Sbjct: 81 ELLLCEKVGISGDDIIFSSNDTPYQEFAKAMELGAIINIDDITMIDFLEANGPIPDRICM 140 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFHNNCENKS----- 171 R NP S+ G E+ + K V H + Sbjct: 141 RYNPGPLLKDGNDIIGTPEESKYGLTRDQIFEAMAILKQKGVKRFGLHTMVVSNELNANG 200 Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKYS 226 M + + I++I GGGI + +K+ EK Sbjct: 201 LINTAKMMFELAVEVKERLGIYIDFIDFGGGIGLPYRPEESFVDYDVLSAGIKDQFEKIM 260 Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 +++ E G AI L TT + + K+ + D+S+ + + Sbjct: 261 VPNGLDDIRLSFECGRAITGPYGYLVTTAIHHKDIWKHYIGTDASMANLMRPGMYGAYHH 320 Query: 280 TIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F +K GD + D + + +N Sbjct: 321 LTVLGKEEAPADHVYDVTGSLCENCDKFAVDRPLPEIKDGDILVIHDTGAHGHSMGFNYN 380 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 G + + D ++ IR + +D + L Sbjct: 381 GKLRSAELLMHKDHSVTQIRRAETVDDLFATL 412 >gi|295101800|emb|CBK99345.1| Diaminopimelate decarboxylase [Faecalibacterium prausnitzii L2-6] Length = 432 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 60/399 (15%), Positives = 117/399 (29%), Gaps = 35/399 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+++ D++ + N N G + A+K + L + G SSL Sbjct: 19 VPTPFHVYDEKGIRENARRINKAFSWNKGFREYFAVKALPNPVILQILKEEGCGVDCSSL 78 Query: 61 YEVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QK 113 E+ML F G ++ ++ I + + ++ A Sbjct: 79 TELMLSEVCGFSGSDIMFSSNQTPVEDMKKAYELGAYINLDDATMVDFLDRVAGVPENIF 138 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE---------IKNVN-GLMF 163 G S F + D ++ G + I+S ++ L Sbjct: 139 CRYNPGGTFQLGESKEGFQVMDKPG-DAKYGMTEEQMIDSYKKLAAKGAKNFGIHAFLAS 197 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + + + + + I +I+L GG+ + ++ + E Sbjct: 198 NTISDAYYPELAGILFQLAVRVQKATGVHIAYINLSGGVGIPYRPEQTENDIMAIGEGVR 257 Query: 224 KYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272 K +I + E G L T + K + +D+ + Sbjct: 258 KKFEEILVPAGMGDVSIFTEMGRFTTGPYGALVATAIHEKHIYKEYIGLDACAANLMRPA 317 Query: 273 LLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + + V G C D F + IGD + D + Sbjct: 318 MYGAYHHITVLGKEDAPHDHKYDVVGGLCENNDKFAIDRMLPKIDIGDIVYIHDTGAHGS 377 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +NG + DG+ + IR + DY+ L Sbjct: 378 AMGYNYNGKLRSAEVLLCEDGSHRLIRRAETPRDYFATL 416 >gi|197303210|ref|ZP_03168252.1| hypothetical protein RUMLAC_01933 [Ruminococcus lactaris ATCC 29176] gi|197297750|gb|EDY32308.1| hypothetical protein RUMLAC_01933 [Ruminococcus lactaris ATCC 29176] Length = 423 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 62/391 (15%), Positives = 122/391 (31%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G K A+K + D L +Y G SS Sbjct: 20 PTPFHLYDEKGIRANAKALKEAFSWNPGYKEYFAVKATPNPFLLDILKEYGCGCDCSSYT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML G ++ + I + +S + + + + I Sbjct: 80 ELMLSEAVGVTGHNIMFSSNDTPAEDFRLADKLGAIINLDDISHIEFLESAIGHIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N ++ G + ++S+ G+ Sbjct: 140 CRYNPGGLFKISNDIMDNPGDAKYGMTTEQITEAFKILKSKGAKEFGIHAFLASNTVTND 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + + I++I+L GGI + + + E K + Sbjct: 200 YYPMLAKVLFEQAVRLKNETGANIKFINLSGGIGIPYRPDQEPNDIYAIGEGVRKVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T + + K+ + VD+ + + Sbjct: 260 LVPAGMGDVAIFTELGRYMMGPYGCLVTKAIHEKKTYKDYIGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F ++ GD + D + + + Sbjct: 320 HITVLGKENEPCDHKYDVTGSLCENNDKFAIDRMLPEIERGDYLVIHDAGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR + DY+ Sbjct: 380 NGKLKSAELLLKEDGSVQMIRRAETPKDYFA 410 >gi|283798516|ref|ZP_06347669.1| diaminopimelate decarboxylase [Clostridium sp. M62/1] gi|291073776|gb|EFE11140.1| diaminopimelate decarboxylase [Clostridium sp. M62/1] gi|295090150|emb|CBK76257.1| Diaminopimelate decarboxylase [Clostridium cf. saccharolyticum K10] Length = 451 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 126/391 (32%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N + N G + A+K + D L + G SSL Sbjct: 49 PTPFHLYDEKGIRENAERLKRAFSWNKGFREYFAVKATPNPFIIDILKKLDCGVDCSSLT 108 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ ++ GE ++ E S I + ++ + + + + I Sbjct: 109 ELMMAEAMEYDGEKIMFSSNDTPLEEFQKADSLGAIINLDDITHIEFLEKAIGHIPETIS 168 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N ++ G + ++S+ G+ Sbjct: 169 CRYNPGGLFKISNDIMDNPGDAKYGMTTEQIFEAFKILKSKGAKRFGIHAFLASNTVTNE 228 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + K +I +I+L GGI + + + E K + Sbjct: 229 YYPMLAKVLFELAVKLKEETGAEIAFINLSGGIGIPYRPDQEPNDIFMIGEGVRKVYEEV 288 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L TT + K + VD+ + + Sbjct: 289 LVPAGMGDVAIYTELGRFMLGPYGCLVTTAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 348 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + G C D F + +GD + D + + + Sbjct: 349 HITVMGKEKEPCDHKYDITGSLCENNDKFAIDRMLPKIDLGDLLVIHDTGAHGFSMGYNY 408 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR + DY+ Sbjct: 409 NGKLRSAELLLREDGSVQMIRRAETPRDYFA 439 >gi|158522146|ref|YP_001530016.1| diaminopimelate decarboxylase [Desulfococcus oleovorans Hxd3] gi|158510972|gb|ABW67939.1| Diaminopimelate decarboxylase [Desulfococcus oleovorans Hxd3] Length = 418 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 62/391 (15%), Positives = 119/391 (30%), Gaps = 31/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D+ + L + G + A+K + D + G SS+ Sbjct: 23 GTPFHIYDEAGIRGTGKALLDAFSSVPGFREYYAVKALPNPRILDIMRSMGFGFDCSSIP 82 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E++L GE + A + L+ + + Sbjct: 83 ELVLARRAGAIGEEIMFTSNNTS----AEEFEAALADSGCILNLDDISLIYKVPKLPDLV 138 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKSFL 173 + + A P D+I + V GL ++ Sbjct: 139 CFRYNPGERRTGNAIIGNPVEAKYGVAHDQILEAYRKVRDMGARRFGLHAMLASNERNHT 198 Query: 174 CFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK- 224 + + Q E++++GGG+ + + ++ + E+ Sbjct: 199 YMVTTAEMLLDLVRDISDTLDIQFEFVNIGGGLGISYRPGEPPLDLPAMGAQISDVFERF 258 Query: 225 -----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 Y ++Y+E G + L T V++ + V VD+ + A + + Sbjct: 259 GRERRYMPRLYIESGRYMTGPHGALVTRVINRKHIYRTYVGVDACMSALMRPAIYGAYHH 318 Query: 280 TIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 P T V G C D F GD + D + I +NG Sbjct: 319 ISLPTKSGGPVETVDVVGALCENNDKFAVQRELPVAAEGDLMVIHDTGAHGIAMGFNYNG 378 Query: 337 INMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 P + DG+++ IR + DY+ L Sbjct: 379 RMRPMELLLREDGSVELIRRAETVEDYFATL 409 >gi|78184964|ref|YP_377399.1| diaminopimelate decarboxylase [Synechococcus sp. CC9902] gi|78169258|gb|ABB26355.1| diaminopimelate decarboxylase [Synechococcus sp. CC9902] Length = 459 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 51/396 (12%), Positives = 107/396 (27%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ L + K + A K ++ M + G + S Sbjct: 52 GTPLYVLDETTLRSTCRAYRDALKRHYPGPSLPIYASKANSSLVMSSLVASEGLGLDAVS 111 Query: 60 LYEVMLG-HEKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ G + D E+ +N T++ + L++ Sbjct: 112 AGELLTALRGGMPGNRMVLHGNNKSDEELLLAYNNNVTVVVDNQHDLDRLSALIPHDGAP 171 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + L + P + S+ G + + GL H + Sbjct: 172 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQVEPVLRGLVGQSWAKLTGLHAHIGSQ 231 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224 + + +E +++GGG+ R + + Sbjct: 232 IFELEPHRDLAAVMADALKLARDLGHPVEDLNVGGGLGIRYVKSDDPPSIDRWVQVVAEA 291 Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 ++ EPG ++V TV +D + + Sbjct: 292 VIAACQARSLDLPRLMCEPGRSLVATAGVTLYTVGSRKTIPGVRTYVAIDGGMSDNPRPI 351 Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + T + G+ C +GD+ + GD I+ YN Sbjct: 352 TYQSLYTCCVADRPLAETDETVNLVGKHCESGDVLLKDLPLPSTTSGDVIAVFATGAYNA 411 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + + + +D Sbjct: 412 SMSSNYNRIPRPAAVLVHDGAAELVQKREQPDDLLR 447 >gi|84494549|ref|ZP_00993668.1| diaminopimelate decarboxylase [Janibacter sp. HTCC2649] gi|84384042|gb|EAP99922.1| diaminopimelate decarboxylase [Janibacter sp. HTCC2649] Length = 487 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 57/415 (13%), Positives = 111/415 (26%), Gaps = 53/415 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++D+ + G + A K F + + Q Sbjct: 62 GTPAYVVDEGDFRARARSFRDDFAAPFETVCGGADIYYAGKAFLCTAVAKWVAQEGLSLD 121 Query: 57 SSSLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK 113 S E+ + F E ++ K A+ I+ ++ ++ + + A + Sbjct: 122 VCSGGELAVARRAGFPAERIGFHGNNKSLAEIRDALDYGVGRIVVDSFIEIERVAEIAAE 181 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLM 162 L + +R+ V + G + + ++ GL Sbjct: 182 LGVVAPVMIRVTVGVEAHTHEFIATGHEDQKFGFSLSGGQALVAAKAVLAHDTLDLRGLH 241 Query: 163 FHNNCENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTD--------KDYP 210 H + F + + I LGGG Sbjct: 242 SHIGSQIFDTGGFEMSARRLVGLHAQIANELGHHSPEIDLGGGFGMAYTSQHTPLGPGEL 301 Query: 211 VKDFCQRLKEFSEKY----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260 + + ++ +EPG AIV +T V + Sbjct: 302 GAQLADIVGREFKAIGANSDSVAVPFPRVSIEPGRAIVGPSTFTLYEVGTVKPVELGDHH 361 Query: 261 VDSS------VEAHVPDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEK 310 + +V L + + N P A V G+ C +GDI + + Sbjct: 362 SRVYVSVDGGMSDNVRPALYEADYSCTLANRSSDAEPMLARVVGKHCESGDIVVQDEWLP 421 Query: 311 -PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + GD I+ Y + +N P + +R + +D Sbjct: 422 ADTQPGDLIAVPGTGAYCRALSSQYNHTPRPPVLAVRDGKARVIVRRETIDDLLA 476 >gi|266619241|ref|ZP_06112176.1| diaminopimelate decarboxylase [Clostridium hathewayi DSM 13479] gi|288869234|gb|EFD01533.1| diaminopimelate decarboxylase [Clostridium hathewayi DSM 13479] Length = 422 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 65/391 (16%), Positives = 123/391 (31%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N N G K A+K + + L ++ GT SS Sbjct: 20 PTPFHIYDEKGIRENAKKLKEAFAWNPGYKEYFAVKATPNPFILNILKEFGCGTDCSSET 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G ++ E I + ++ + ++ ++ + I Sbjct: 80 ELMMADALGFSGSDIMFSSNDTPAEEFRFAHKIGAIINLDDITHIEYLENAIGEIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE---------IKNVN-GLMFHNNCEN 169 R NP + N S+ G + E+ ++ L + Sbjct: 140 CRYNPGGVFKISNDIMDNPGDSKYGMTTEQMFEAYQVLKEKGAKHFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 L + + K I++I+L GGI + + + E K +I Sbjct: 200 YYPLLAKILFELAVKLKEETGAHIQFINLSGGIGIPYRPDQEPNDIMAIGEGVRKAYEEI 259 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 Y E G ++ L T + K V VD+ + + Sbjct: 260 LVPAGMDDVAIYTELGRYMLGPYGALVTRAIHEKHTHKEYVGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + V G C D F + GD + D + + Sbjct: 320 HVTVMGRENDPCDHKYDVVGSLCENNDKFAIDRMLPEIHKGDLLYIHDTGAHGFAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR + DY+ Sbjct: 380 NGKLKSAELLLKEDGSVEMIRRAETPKDYFA 410 >gi|315924798|ref|ZP_07921015.1| diaminopimelate decarboxylase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621697|gb|EFV01661.1| diaminopimelate decarboxylase [Pseudoramibacter alactolyticus ATCC 23263] Length = 422 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 58/395 (14%), Positives = 114/395 (28%), Gaps = 35/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ + + + + GV + A K F M + + S Sbjct: 20 GTPLYVMSEDIIRDRIKAIRKAFDLTGVAYDINYAGKAFTNLAMCRIIASEGISLDTVSR 79 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+M F E ++ K D AV I+ ++ +L + + + + Sbjct: 80 GEIMTALKAGFPAERICFHGNNKRVDELRYAVEYGVGHIVVDSEDELARLETIQAETGAE 139 Query: 118 IGLR--INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCE 168 I + I+P V L S+ G + K V+GL H + Sbjct: 140 IAIMFRISPGVEAHTHELIQTGTEDSKFGIPYQQAKAVVRKASQMRGITVDGLHCHIGSQ 199 Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP--------VKDFCQR 217 F + + + ++LGGG + Sbjct: 200 IVDDKPFVLAADRMLSLYQALVQEGVPLTTLNLGGGFGIPYLTGDESFDTLKYIPQMVDH 259 Query: 218 LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 +K++ ++ +EPG I TV + +D + + Sbjct: 260 VKQWCRAEGLECPKLVVEPGRFIACEAGVTLYTVGTVKTIPGVRKYVAIDGGMNDNPRPA 319 Query: 273 LLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 L + N + GR+C D +GD + + YN Sbjct: 320 LYGAQYEAFICNGKAEEQLESCRISGRACE-NDQLIAEMPLNQPTVGDTLMVTNTGAYNY 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 + +N P + + + D + + + Sbjct: 379 TMASVYNRFGRPAVVLLSGDRDAVIVERETDEELL 413 >gi|160897263|ref|YP_001562845.1| diaminopimelate decarboxylase [Delftia acidovorans SPH-1] gi|160362847|gb|ABX34460.1| diaminopimelate decarboxylase [Delftia acidovorans SPH-1] Length = 431 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 53/397 (13%), Positives = 110/397 (27%), Gaps = 47/397 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + A K + + + + + S E Sbjct: 28 GTPLWVYDAATIRARIAQLK-AFD----TIRFAQKACSNIHILRLMREQGVKVDAVSRGE 82 Query: 63 VMLGHEKFGGE--------THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ-K 113 ++ + D A ++ + + ++ AQ Sbjct: 83 ILRALAAGYAAGHGDDLHSDIVFTADVMDEATLACVA--EHKVPVNAGSIDMLHQLAQAS 140 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNC 167 + LRINP + + S+ G D + + + GL H Sbjct: 141 PGHPVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSDLLAALQAIRDGGLKLAGLHMHIGS 200 Query: 168 ENKSFLCFSAMLKNIE--KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-- 223 +E + ++ IS GGG+ +D + Sbjct: 201 GVDYGHLQQVCGAMVELVRATRQAGHDLQAISAGGGLSIPYRDGDATIDTAHYHGLWDAA 260 Query: 224 --------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLL 274 +++ + +EPG +V + L V N + VD+ + + Sbjct: 261 RKDAEAIVGHALGLEIEPGRFLVAESGVLLGQVRATKNAGSNHFVLVDTGFNELMRPSMY 320 Query: 275 YQESATIYPNTGPY-----TAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFED 322 A+V G C +GD+F + +GD + D Sbjct: 321 GSWHGMEVLRRDGQAMPLRDAVVAGPLCESGDVFTQGDGGVVLPRALAGASVGDLLVIHD 380 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 Y + + +N + + + D T R + Sbjct: 381 TGAYGSSMSSNYNTRPLAAEVLVDGDSTRLIRRRQTV 417 >gi|312277664|gb|ADQ62321.1| Diaminopimelate decarboxylase [Streptococcus thermophilus ND03] Length = 417 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 59/393 (15%), Positives = 116/393 (29%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 20 PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGCGVDCATDT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+++ ++ F ++ D + + D + + L Sbjct: 80 ELVMSNKVGFDSTAISFTSN--DTRAEEFVYARDINAIINLDAYEDIFFLEESAGLPETL 137 Query: 121 RINPSVSYSKFIL--ADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCE 168 + + + + S+ G + + K V H Sbjct: 138 SLRFNPGGVFLLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLHAFLASNTVTN 197 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + + +++I+L GG+ ++ + E + Sbjct: 198 EYYPTLAAQLFELAVEIKNELGISLDFINLSGGVGVDYTPANKQNDIAAIGEGVHTKFDE 257 Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I Y E G + L T VL I + + V VD+S + + Sbjct: 258 ILVPNDLGDISIYTELGRFMTAPHGLLVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAY 317 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F + +IGD + D + + + Sbjct: 318 HHITNMTNPNGDIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DGT + IR + NDY+ L Sbjct: 378 NGRLRSAEILYQEDGTARMIRRAETMNDYFATL 410 >gi|281419868|ref|ZP_06250867.1| diaminopimelate decarboxylase [Prevotella copri DSM 18205] gi|281405995|gb|EFB36675.1| diaminopimelate decarboxylase [Prevotella copri DSM 18205] Length = 385 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 71/370 (19%), Positives = 129/370 (34%), Gaps = 28/370 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I+TP+Y D L L T K+ G ++ A+K A + + + Q G S Sbjct: 13 IQTPFYYYDTNVLRQTLKTINEEAGKHEGFEVHYAVKANANPKVLNIICQAGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F Y K + FN ++ +L + A Q Sbjct: 73 GEIQAAIKAGFPASKIVYAGVGKSDWEINLGLEKGIFCFNVESIPELEIINELAEKQNKI 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168 ++ RINP V ++ G ++ + + GL FH + Sbjct: 133 AQVCFRINPDVGAHTHANITTGLAENKFGIAMRDMEAVIEEAAKMKNIQFLGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F + ++ + ++ I++GGG+ +P + K++ + Y Sbjct: 193 ILDMGDFEALCNRINELQNQLEAHHIVVKNINVGGGLGIDYN-HPNRQPIPNFKDYFDTY 251 Query: 226 S--------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL-- 274 + +++ E G A+V +L T L I + K IVD+ + + L Sbjct: 252 AKKLKLRDGQKLHFELGRAVVGQMGSLITKTLYIKQGTAKQFAIVDAGMTDLIRPALYQA 311 Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 Y + I + T V G C + D+FG+ GD I+ Y + + Sbjct: 312 YHKIENISSDEPVETYDVVGPICESSDVFGKAVDINKAHRGDLIALRSAGAYGEIMASQY 371 Query: 335 NGINMPTIAV 344 N +P + Sbjct: 372 NCRQLPKGYI 381 >gi|256377328|ref|YP_003100988.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827] gi|255921631|gb|ACU37142.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827] Length = 437 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 117/390 (30%), Gaps = 30/390 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D+ + + +++ A K ++ + S E Sbjct: 49 GTPCQVLDEGTVRARARGFREVLPE--AEVVFAGKALPCRAVYRWVADEGLSLDVCSAGE 106 Query: 63 VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F E + + A+ ++ ++ ++ + A+ + Sbjct: 107 LAIARSVGFPAERILLHGNVKTPEDLKAALGYGVGRVVVDSFDEIEQLGALARGPQD-VL 165 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCENK 170 +R+ P V + G +E + GL H + + Sbjct: 166 VRVTPGVDPRTHRAVATGVEDQKFGFPLAGGDALEAVLRVVEQPSLRLVGLHCHVGSQVR 225 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 + + + +IE + LGGG ++ + F R++ Sbjct: 226 HVAVYEEAARRMVGLIASCGVRIEQLDLGGGFAVPYLPGEGEFDLGGFAHRVRVALSHEC 285 Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES 278 ++ +EPG ++V V + ++ V VD + + L Sbjct: 286 ALRRVPVPRLLIEPGRSVVAGAGVTLYRVAAVKRGVRRVFVAVDGGMSDNPRPALYGSRY 345 Query: 279 ATIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFN 335 A G V GR C AGD+ E V+ GD ++ Y+ + +N Sbjct: 346 AVRLVGRGGRRAPVTVVGRHCEAGDVLAEDVPLPADVRAGDLLAVPVTGAYHHALASNYN 405 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + P + +R + D Sbjct: 406 AVGRPPVVGVRDGVARVLVRRETEEDVLRR 435 >gi|291284165|ref|YP_003500983.1| Diaminopimelate decarboxylase [Escherichia coli O55:H7 str. CB9615] gi|209760944|gb|ACI78784.1| diaminopimelate decarboxylase [Escherichia coli] gi|290764038|gb|ADD57999.1| Diaminopimelate decarboxylase [Escherichia coli O55:H7 str. CB9615] Length = 420 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 117/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G C D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWCTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|333000921|gb|EGK20491.1| diaminopimelate decarboxylase [Shigella flexneri K-272] Length = 420 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFEV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLECVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRYHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|297626227|ref|YP_003687990.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921992|emb|CBL56554.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 543 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 61/402 (15%), Positives = 119/402 (29%), Gaps = 42/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P YL D+ + + A K + + + G S E Sbjct: 139 GSPLYLFDEDDFRHRARDFKSAFDGWN--VYYAGKAMLTRTIARLVMEEGLGMDVCSGGE 196 Query: 63 VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + + K D A+ + I+ +++ ++ + + H + Sbjct: 197 LQVALAGGMDPARIGMHGNNKTSDELALALSNGVGHIVVDSLDEIGRIEQLCRDNDWHAR 256 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + +R+ P V + G S ++ G+ H + Sbjct: 257 VMVRVTPGVEAHTHEYIATAHEDQKFGFSIANGQAMVAMVRCHYSPYMDLLGIHSHIGSQ 316 Query: 169 NKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +K + + ++LGGG L + Sbjct: 317 IFDTGGFEVAALRTMKLSSQFTDATGVHLPELNLGGGFGIAYTSADSPSTPDALATGLRE 376 Query: 225 YSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEA 267 + +EPG AIV TT TV + + V VD + Sbjct: 377 IVEHEARAHSMAVPKMSIEPGRAIVGPTTMAIYTVGTVKVVDLDGGGQRVYVSVDGGMSD 436 Query: 268 HVPDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 ++ L E + + N + V G+ C GDI F ++ GD I+ D Sbjct: 437 NIRPALYGAEYSAVLANRTSSEPGVLSRVVGKHCEGGDILVRDVFLPSDIEPGDLIAVPD 496 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y+ + +N P + + IR + +D + Sbjct: 497 MGAYSREMASNYNHALRPPVVRVHNGELSAMIRRETMDDLLS 538 >gi|295398186|ref|ZP_06808232.1| diaminopimelate decarboxylase [Aerococcus viridans ATCC 11563] gi|294973536|gb|EFG49317.1| diaminopimelate decarboxylase [Aerococcus viridans ATCC 11563] Length = 417 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 61/394 (15%), Positives = 121/394 (30%), Gaps = 29/394 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I TP++L D+ + + N A+K + + + G +S Sbjct: 20 IPTPFHLYDEAGIRDRCRRLKKAFSWNPNFHEYFAVKATPNPHVLKIMQEEGMGVDCASY 79 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E++L + F G ++ + I F+ ++ ++ FK+ + + + Sbjct: 80 TELVLADKVGFSGHDIMFSSNVTPAADFKKAAELGAIINFDDITHIDFFKEHVGEFPETV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVN--GLMFHNNCENKSF 172 +R NP ++ N ++ G + + V G+ + S Sbjct: 140 CIRYNPGGTFEVANGIMDNPGDAKYGMTPEQTRQAFQKLADYGVKNIGIHSFLVSGSTSN 199 Query: 173 LCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + + I +I+L GG+ K + + + Sbjct: 200 EYYPKLARTLFELAVELKDQTDLNITFINLSGGVGVAYKPEETPADIDIIGDGVRQAYED 259 Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I + E G ++ L VL K+ + +D+S + + Sbjct: 260 IMEPAGLGDVAIFTELGRWMLAENGGLVAKVLHEKITYKDYIGLDASASDLLRPAMYGAY 319 Query: 278 SATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 T V G C D F IGD I D + + Sbjct: 320 HHISVLGKEDETADQTYDVTGGLCENNDKFAIDRQLPKTNIGDYIWIHDAGAHGASMGYQ 379 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +N + DGT K IR + DY+ + Sbjct: 380 YNAKLRSAEVMLKEDGTFKQIRRPETPEDYFATM 413 >gi|55820349|ref|YP_138791.1| diaminopimelate decarboxylase [Streptococcus thermophilus LMG 18311] gi|55822239|ref|YP_140680.1| diaminopimelate decarboxylase [Streptococcus thermophilus CNRZ1066] gi|55736334|gb|AAV59976.1| diaminopimelate decarboxylase [Streptococcus thermophilus LMG 18311] gi|55738224|gb|AAV61865.1| diaminopimelate decarboxylase [Streptococcus thermophilus CNRZ1066] Length = 421 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 59/393 (15%), Positives = 116/393 (29%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 24 PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGCGVDCATDT 83 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+++ ++ F ++ D + + D + + L Sbjct: 84 ELVMSNKVGFDSTAISFTSN--DTRAEEFVYARDINAIINLDAYEDIFFLEESAGLPETL 141 Query: 121 RINPSVSYSKFIL--ADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCE 168 + + + + S+ G + + K V H Sbjct: 142 SLRFNPGGVFLLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLHAFLASNTVTN 201 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + + +++I+L GG+ ++ + E + Sbjct: 202 EYYPTLAAQLFELAVEIKNELGISLDFINLSGGVGVDYTPANKQNDIAAIGEGVHTKFDE 261 Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I Y E G + L T VL I + + V VD+S + + Sbjct: 262 ILVPNDLGDISIYTELGRFMTAPHGLLVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAY 321 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F + +IGD + D + + + Sbjct: 322 HHITNMTNPNGDIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNY 381 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DGT + IR + NDY+ L Sbjct: 382 NGRLRSAEILYQEDGTARMIRRAETMNDYFATL 414 >gi|87306324|ref|ZP_01088471.1| diaminopimelate decarboxylase [Blastopirellula marina DSM 3645] gi|87290503|gb|EAQ82390.1| diaminopimelate decarboxylase [Blastopirellula marina DSM 3645] Length = 423 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 58/399 (14%), Positives = 116/399 (29%), Gaps = 45/399 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D K++ ++ + A K + + D + + + S +E Sbjct: 27 GTPTFVYDAAKIVERIEDLR-AFDV----IRYAQKACSNLAILDLMRKNGVMVDAVSAWE 81 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHK 116 + Y D E A+ + + + + + A Sbjct: 82 IRRALAAGYGAKGEPAPLVYTADIFDHEALALCVEHGLHVNCGSPDMIAQLGEAA--PGS 139 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 +I LRINP + + S+ G + + V GL H Sbjct: 140 EITLRINPGFGHGHSQKTNTGGQQSKHGIWHEQLHECLLIADQHGVRVTGLHMHIGSGTD 199 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK-- 224 + + ++EK I IS GGG+ + + + ++ Sbjct: 200 -LEHLAQVCGSMEKAALEVGRTITTISAGGGLPIPYNASQTYVDLDQYFELWNGVRKRLQ 258 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA 279 ++V + +EPG + + L + I +N V + ++ L Sbjct: 259 DSFGHTVSLEIEPGRYLSAESGFLLAEIRAIKTMGENKFYVVDAGFNNLARPILYGSYHP 318 Query: 280 TIYPNTGPYT-------AMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAG 325 T +V G C +GDIF + IGD + E Sbjct: 319 MSIALASGETDERPHLDVVVGGPLCESGDIFTQEEGGFVGTRSLPAASIGDFLVIECAGA 378 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N + + T ++ + Sbjct: 379 YGFVMGSNYNSKPLAAEVLIRDGQTHLIRERQTFENLIA 417 >gi|329116995|ref|ZP_08245712.1| putative diaminopimelate decarboxylase [Streptococcus parauberis NCFD 2020] gi|326907400|gb|EGE54314.1| putative diaminopimelate decarboxylase [Streptococcus parauberis NCFD 2020] Length = 412 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 67/388 (17%), Positives = 126/388 (32%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 19 PTPFHLYDEKGIREKARALNKAFSWNKGFKEYFAVKATPTPAILKILQEENCGVDCATDV 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+++ HE + + K E TI ++ Q+ K L + I LR Sbjct: 79 ELLMSHELGFTDVMFSSNNTKASEYQYARQINATINLDSYDQIGFLKAI-TSLPETISLR 137 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN----KS 171 NP +++ + S+ G + ++++ G+ Sbjct: 138 YNPGGTFTLGTAIMDHPQESKFGMTKEQLFQGIRDLKADGVQSFGIHSFLASNTVTNDYY 197 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY- 230 + + ++++I+L GGI + + + E K ++ Sbjct: 198 PELARDLFNLAVEIKDQLGVKLDFINLSGGIGVNYRPEEKANDIAVIGEGVRKVYQEVIE 257 Query: 231 ----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 E G ++ L TTVL E K V VD+S + + Sbjct: 258 PHNLGDLKIFTELGRFMLAPHGHLITTVLHRKETYKKYVGVDASAVNLLRPAMYGSYHHI 317 Query: 281 I---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 +P T V G C D F + +IGD + D + + +NG Sbjct: 318 TNSSHPLADFETVDVVGSLCENNDKFAKDRQLPKAEIGDILVIHDTGAHGFSMGYQYNGR 377 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + +G + IR + DY+ Sbjct: 378 LRSAEILLKENGDTRLIRRAETPEDYFA 405 >gi|326791961|ref|YP_004309782.1| diaminopimelate decarboxylase [Clostridium lentocellum DSM 5427] gi|326542725|gb|ADZ84584.1| diaminopimelate decarboxylase [Clostridium lentocellum DSM 5427] Length = 417 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 59/391 (15%), Positives = 118/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ ++ L ++ ++K + +++ S E Sbjct: 28 GSPLYIYNENILRTRCREMKHLVSYENFVPHYSIKANTNIHLLKIVHEEGLHADVMSPGE 87 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIGL 120 + L E F E + E + + + +++ QL + K+ + Sbjct: 88 IYLALESGFSPEELFFIPNNVVAEDMLYAIDRNIMTSVDSLDQLELYGQL--NPGGKVAI 145 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENKSFLCFS 176 R NP V ++ G + E E N+ + + + Sbjct: 146 RFNPGVGAGHHEKVVTGGKKTKFGVNPEYIPEVKRLLETYNLTLAGINQHIGSLFMDGAP 205 Query: 177 AMLKNIEK-EFGHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEK--------- 224 + +E+I LGGG + + L E + Sbjct: 206 YIESLGSILSIAKQFDDLEFIDLGGGFGIPYHKQDGEARLNIKALGEALDPVLSSFAKEY 265 Query: 225 -YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +VQ +EPG I + L TV N + + + ++Y I Sbjct: 266 GKNVQFQIEPGRYIPCESCALVGTVTATKTNADHDYVGCDIGFNVLQRPIMYDSHHDIEI 325 Query: 284 NTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNG 336 + V G C +GDI + + GD I+ D Y + + +N Sbjct: 326 YSRELKEAPLGPLTVVGNICESGDILAKDRMLPLTTVRGDLIALMDAGAYGYSMASCYNQ 385 Query: 337 INMPTIAVKNVDGTIK-AIREFSYNDYYNNL 366 P + +DG ++ + + D N+ Sbjct: 386 RFRPAEILIGLDGKVRQIRKRDTLEDLIRNM 416 >gi|225548244|ref|ZP_03769529.1| hypothetical protein RUMHYD_00223 [Blautia hydrogenotrophica DSM 10507] gi|225040584|gb|EEG50830.1| hypothetical protein RUMHYD_00223 [Blautia hydrogenotrophica DSM 10507] Length = 427 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 65/391 (16%), Positives = 124/391 (31%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G K A+K + L +Y G SSL Sbjct: 20 PTPFHLYDEKGIRENAKALKEAFAWNKGYKEYFAVKATPNPYLIQILQEYGCGCDCSSLT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ G+ ++ E + I + ++ ++ + + KKI Sbjct: 80 ELMMAKALGCKGDDIMFSSNATPANEYEYARKIGAIINLDDITHIDFLEKVTGSIPKKIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N ++ G + ++S+ G+ Sbjct: 140 CRYNPGGLFKISNDIMDNPGDAKYGMTTEQIFEAFKILKSKGAQEFGIHAFLASNTVTND 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + K +I +I+L GGI + + + + E K ++ Sbjct: 200 YYPTLAKVLFEVAVKLKEETGAKITFINLSGGIGIPYRPDQTANDIRVIGEGVRKVYEEV 259 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 Y E G ++ L TT + K + D+ + + Sbjct: 260 LVPAGMGDVALYTELGRFMMGPYGALVTTAIHEKHTYKEYIGCDACAANLMRPAMYGAYH 319 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 +T V G C D F +++GD + D + + + Sbjct: 320 HITVMGKEDAPCDHTYDVTGSLCENNDKFAIDRKLPKIEMGDLLFLHDAGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+ + IR DY+ Sbjct: 380 NGKLRSAEILLKEDGSYQMIRRAEKPQDYFA 410 >gi|254374911|ref|ZP_04990392.1| diaminopimelate decarboxylase [Francisella novicida GA99-3548] gi|151572630|gb|EDN38284.1| diaminopimelate decarboxylase [Francisella novicida GA99-3548] Length = 394 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 63/372 (16%), Positives = 119/372 (31%), Gaps = 30/372 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D + L + A ++ A+K + D +Y G S Sbjct: 23 TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVDIAKKYGMGIDCVSGG 82 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHK-- 116 E+ E K + + K + + D FN+ S AQ+ +K Sbjct: 83 EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKKV 142 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168 I LR+NP++ + + G D + N+ GL +H + Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 202 Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 ++ F + I+ I+ GGG+ + R + Sbjct: 203 ILNYQVFQSLAITTNEHIRLLKQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262 Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277 EF E ++ E G ++V + L + VL + VI+D+ + + L + Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 322 Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G C + D+F +++ +K GD ++ Y + Sbjct: 323 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 382 Query: 334 FNGINMPTIAVK 345 +N Sbjct: 383 YNLRPSVQEYFI 394 >gi|313113931|ref|ZP_07799489.1| putative diaminopimelate decarboxylase [Faecalibacterium cf. prausnitzii KLE1255] gi|310623770|gb|EFQ07167.1| putative diaminopimelate decarboxylase [Faecalibacterium cf. prausnitzii KLE1255] Length = 428 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 63/399 (15%), Positives = 118/399 (29%), Gaps = 35/399 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+++ D++ + N N G K A+K + L + G SSL Sbjct: 19 VPTPFHVYDEKGIRENARRINKAFSWNKGFKEYFAVKALPNPVILQILKEEGCGVDCSSL 78 Query: 61 YEVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QK 113 E+ML F G ++ ++ I + + + + A Sbjct: 79 TELMLSEVCGFSGSEIMFSSNQTPVEDMKKAYELGSYINLDDATMVEFLERVAGVPENIF 138 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE---------IKNVN-GLMF 163 G + S F + D ++ G + IES ++ L Sbjct: 139 CRYNPGGTFSLGESEEGFQVMDKPG-DAKYGMTEEQMIESYKKLAAKGAKNFGIHAFLAS 197 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + + + + + I +I+L GG+ + ++ + E Sbjct: 198 NTISDEYYPELAGILFQLAVRVQKATGVHIGYINLSGGVGIPYRPEQTENDIMAIGEGVR 257 Query: 224 KYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272 K +I + E G L T + K + +D+ + Sbjct: 258 KKFEEILVPAGMGDVAIFTEMGRFTTGPYGALVATAIHEKHIYKEYIGLDACAANLMRPA 317 Query: 273 LLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + + V G C D F + IGD + D + Sbjct: 318 MYGAYHHITVLGKENESCDHMYDVVGGLCENNDKFAIDRMLPKIDIGDIVYIHDTGAHGS 377 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +NG + DGT + IR + DY+ L Sbjct: 378 AMGYNYNGKLRSAEVLLCEDGTHRLIRRAETPRDYFATL 416 >gi|282855373|ref|ZP_06264697.1| diaminopimelate decarboxylase [Pyramidobacter piscolens W5455] gi|282586794|gb|EFB92038.1| diaminopimelate decarboxylase [Pyramidobacter piscolens W5455] Length = 436 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 56/395 (14%), Positives = 108/395 (27%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ L + ++ A K F M +++ + S E Sbjct: 21 GTPLYVMDETMLRDRCRRLSAAVAGRNARVCYAGKAFLNVAMARLVDEEGLCLDTVSPGE 80 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + F E + K A T+ ++ +L + +K Sbjct: 81 FRIACAAGFPMERVTLHGNAKTEAFLAAGLERGVGTVAVDSEDELALLARLCAKRGARQK 140 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LR++P + + + G + ++ GL H + + Sbjct: 141 ILLRLSPGIEAHTHRFIQTAQKDCKFGVPLAHLERAVRFALGATGLDLAGLHVHVGSQIR 200 Query: 171 ----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 M + + + LGGG ++ +R Sbjct: 201 DVGTYLQAADRMTEIMRSLREATGFAARELDLGGGFGIPERPGAAGAPAERFVAAILDRV 260 Query: 227 VQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273 EPG + TV + E V + + L Sbjct: 261 DARCAELRLARPEVAFEPGRWVAGEAGITLYTVQGVKEIPGVRTYVAVDGGMTDNPRPQL 320 Query: 274 LYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 E N A + G C GD+ ++ GD ++ YN + Sbjct: 321 YQAEYGVRLANDTERPANRRAAIAGPCCETGDVLTLDTPVPELRRGDVLAVPLTGAYNYS 380 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + A+R + ++ N Sbjct: 381 MFSTYNCALRPAVIFARDGQARVAVRRQTLDELLN 415 >gi|306835847|ref|ZP_07468843.1| diaminopimelate decarboxylase [Corynebacterium accolens ATCC 49726] gi|304568264|gb|EFM43833.1| diaminopimelate decarboxylase [Corynebacterium accolens ATCC 49726] Length = 445 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 59/404 (14%), Positives = 132/404 (32%), Gaps = 43/404 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ D+ + + A K F + + +N+ +++L E Sbjct: 39 QTPLYVFDEDDFRSRCQDMARAFGGPDH-VHYASKAFISKKVVQWVNEEGLCLDAAALNE 97 Query: 63 VMLGHEK-FGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F + KD E + ++ + +L + A + + Sbjct: 98 LKIALAAEFPAARITAHGNNKDEEYLRLCVDAGVGHVVIDNEQELEELNRIAGEAGVVQP 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ P V + + G K +E + +++GL H + Sbjct: 158 VMIRVKPGVDAHTHEFIATSHEDQKFGISLATGAAFAAAKRCLEVDNLHLSGLHCHVGSQ 217 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKD 213 + F +L+ + + + LGGG Y + Sbjct: 218 VFNAEGFKLAAERVLELYRQIHTELGVDLADLDLGGGFGIPYMPYEEALDIDRVAQDMLR 277 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265 + E + + + +EPG ++V + V + + ++ + +D + Sbjct: 278 AVDQTAEELDIKAPFLLVEPGRSLVAGSAVTVYRVGTVKDVETGKADLPVRRYISIDGGM 337 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320 ++ L E + + + + G C +GDI E ++ GD ++F Sbjct: 338 SDNIRPALYGSEYDVRLVNRFSDGEMVPSRIVGFHCESGDILLEEGELPNDIQPGDLLAF 397 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 GY + +NG P + V T +R + D + Sbjct: 398 AATGGYQYMMSSRYNGAVRPAVVATRVGNTKPMLRRETIEDLLS 441 >gi|331654321|ref|ZP_08355321.1| diaminopimelate decarboxylase [Escherichia coli M718] gi|331047703|gb|EGI19780.1| diaminopimelate decarboxylase [Escherichia coli M718] Length = 420 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAARQQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRTLPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|268325882|emb|CBH39470.1| probable diaminopimelate decarboxylase [uncultured archaeon] Length = 432 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 61/395 (15%), Positives = 124/395 (31%), Gaps = 34/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP ++I ++++ N + + + K + + L+ G S + Sbjct: 35 GTPLFVISEKQVRQNYNRLRKAFSRYPDCTIAYSYKTNYLPAVCNILHHEGAGAEVVSAF 94 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E++L + +N K + + D + +++ +L + A+ K + Sbjct: 95 ELLLAKKLGMPSSKIIFNGPGKSDKEIEMFIGDDIALVNADSMEELERINQIAKAKGKIV 154 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK---DKIESEIKNVNGLMFHNNCENK----S 171 + I F + G+ K E + NV G+ H + Sbjct: 155 DVGIRVKPDVPDFFVCPKFGMDIATGQAFKAYQKASELKNLNVVGMHAHIGTKICSTRSY 214 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT-----DKDYPVKDFCQRLKEFSEK-- 224 M K + K + E+ +GGG + +++F E Sbjct: 215 TEGIRQMAKLMSKVNAELGIEFEFFDIGGGFGVPSFTPLFPTEEKVESTATIEQFGESIV 274 Query: 225 ------------YSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVP 270 + LE G I+T+ + T V + V+VD+ V + Sbjct: 275 EAFLSCISDYNLSEPTLVLELGRIIITDPALILTMVEGTKVIGGSTKTVVVDAGVNLIMF 334 Query: 271 DYLLYQESATIYPNT-GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 Y + V G C+ D+ G + G ++ D Y+I+ Sbjct: 335 APYYYHRIVPVVNTERAKEAVDVYGPLCMQMDVLGVNRKLPVLVRGFFLAILDAGAYSIS 394 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 F P + + N R +++D +N Sbjct: 395 LSQQFI-RPRPPVVMVNGGRKRLVRRGETFDDIFN 428 >gi|312862511|ref|ZP_07722753.1| putative diaminopimelate decarboxylase [Streptococcus vestibularis F0396] gi|311101916|gb|EFQ60117.1| putative diaminopimelate decarboxylase [Streptococcus vestibularis F0396] Length = 417 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 121/393 (30%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 20 PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGCGVDCATDT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKI 118 E+++ ++ F ++ D + + D + A L + + Sbjct: 80 ELVMSNKIGFDSTAISFTSN--DTRAEEFVYARDINATINLDAYEDIFFLEEAAGLPETL 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCE 168 LR NP +S + S+ G + + K V H Sbjct: 138 SLRFNPGGVFSLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLHAFLASNTVTN 197 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + + +++I+L GG+ ++ + E + Sbjct: 198 EYYPTLAAQLFELAVEIKNELGVSLDFINLSGGVGVDYTPANKQNDIAVIGEGVHTKFDE 257 Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I Y E G + + T VL I + + V VD+S + + Sbjct: 258 ILVPNDLGDISIYTELGRFMTAPHGLVVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAY 317 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F + +IGD + D + + + Sbjct: 318 HHITNMTNPNGDIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DGT + IR + NDY+ L Sbjct: 378 NGRLRSAEILYQEDGTARMIRRAETMNDYFATL 410 >gi|116627185|ref|YP_819804.1| diaminopimelate decarboxylase [Streptococcus thermophilus LMD-9] gi|116100462|gb|ABJ65608.1| diaminopimelate decarboxylase [Streptococcus thermophilus LMD-9] Length = 417 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 59/393 (15%), Positives = 116/393 (29%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 20 PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILRILKEEGCGVDCATDT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+++ ++ F ++ D + + D + + L Sbjct: 80 ELVMSNKVGFDSTAISFTSN--DTRAEEFVYARDINAIINLDAYEDIFFLEESAGIPETL 137 Query: 121 RINPSVSYSKFIL--ADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCE 168 + + + + S+ G + + K V H Sbjct: 138 SLRFNPGGVFLLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLHAFLASNTVTN 197 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + + +++I+L GG+ ++ + E + Sbjct: 198 EYYPTLAAQLFELAVEIKNELGISLDFINLSGGVGVDYTPANKQNDIAAIGEGVHTKFDE 257 Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I Y E G + L T VL I + + V VD+S + + Sbjct: 258 ILVPNDLGDISIYTELGRFMTAPHGLLVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAY 317 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F + +IGD + D + + + Sbjct: 318 HHITNMTNPNGDIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DGT + IR + NDY+ L Sbjct: 378 NGRLRSAEILYQEDGTARMIRRAETMNDYFATL 410 >gi|118498099|ref|YP_899149.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida U112] gi|194323325|ref|ZP_03057109.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida FTE] gi|118424005|gb|ABK90395.1| diaminopimelate decarboxylase [Francisella novicida U112] gi|194322689|gb|EDX20169.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida FTE] Length = 394 Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 62/372 (16%), Positives = 119/372 (31%), Gaps = 30/372 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D + L + A ++ A+K + D +Y G S Sbjct: 23 TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVDIAKKYGMGIDCVSGG 82 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117 E+ E K + + K + + D FN+ S AQ+ +K+ Sbjct: 83 EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 142 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168 I LR+NP++ + + G D + + GL +H + Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANIKIIGLHYHVGSQ 202 Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 ++ F + I+ I+ GGG+ + R + Sbjct: 203 ILNYQVFQSLAITTNEHIRLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262 Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277 EF E ++ E G ++V + L + VL + VI+D+ + + L + Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 322 Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G C + D+F +++ +K GD ++ Y + Sbjct: 323 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 382 Query: 334 FNGINMPTIAVK 345 +N Sbjct: 383 YNLRPSVQEYFI 394 >gi|324114871|gb|EGC08837.1| diaminopimelate decarboxylase [Escherichia fergusonii B253] gi|325498415|gb|EGC96274.1| diaminopimelate decarboxylase [Escherichia fergusonii ECD227] Length = 420 Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPLTSPDDIVFTADVIDSATLARVSELRIPVNAGSVDMLEQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHTDLPAALAVIARYELKLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F +E IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVSQVI-EFGQDLEAISAGGGLSIPYRDGEEAVDTEHYFGLWNAAREQIAHH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V++ +EPG +V + L V + ++ V++D+ + + Sbjct: 259 LGHRVKLEIEPGRFLVAQSGVLIAQVRSVKQMGRRHFVLIDAGFNDLMRPAMYGSYHRIT 318 Query: 282 YPNTGPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRSFDNTPVVETVVAGPLCESGDVFTQQEGGTVETRELPQVAPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|256024660|ref|ZP_05438525.1| diaminopimelate decarboxylase [Escherichia sp. 4_1_40B] Length = 420 Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 56/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + + + + VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSHHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|261856756|ref|YP_003264039.1| diaminopimelate decarboxylase [Halothiobacillus neapolitanus c2] gi|261837225|gb|ACX96992.1| diaminopimelate decarboxylase [Halothiobacillus neapolitanus c2] Length = 430 Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 112/387 (28%), Gaps = 30/387 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + ++ A+K + + L + G S E Sbjct: 32 GTPTYVYSRSAIERAYTELTTAFGDRPHRICYAVKANSNLAILALLARLGAGFDIVSGGE 91 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + E ++ +D A+ + + + ++L + + A L Sbjct: 92 LARVLKAGGAAEKIVFSGVGKTRDEIEQALRAGVGCLNVESEAELARISEVAAGLGVVAP 151 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 I LR+NP V ++ G + G+ H + Sbjct: 152 ISLRVNPDVDAKTHPYISTGLKDNKFGVPIEQAPALYRHIARDANLKAVGIDCHIGSQIT 211 Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR-------LKE 220 F+ + + ++ + LGGG+ D + Sbjct: 212 DVSPFADAARRVLALLDTLVLEGIELAHLDLGGGLGIRYTDEQPPSAADWVDAVTSVIDR 271 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN---LVIVDSSVEAHVPDYLLYQE 277 + + LEPG+ +V + L + V + + + IVD+++ V L Sbjct: 272 HPIARHLPLMLEPGKFLVGPSGVLLSRVEYLKPHPSDGKSFAIVDAAMNDLVRPALYGSV 331 Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 A P + G C GD G + GD I+ Y + + Sbjct: 332 MAIEAVKPDPVMAAKDWEIVGPVCETGDFLGHGRSLA-LAQGDLIAVLGAGAYGFSMASN 390 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYN 360 +N + + G S Sbjct: 391 YNTRGRAAEVLVDERGATLIGARESVE 417 >gi|332678824|gb|AEE87953.1| Diaminopimelate decarboxylase [Francisella cf. novicida Fx1] Length = 394 Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 63/372 (16%), Positives = 119/372 (31%), Gaps = 30/372 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D + L + A ++ A+K + D +Y G S Sbjct: 23 TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVDIAKKYGMGIDCVSGG 82 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHK-- 116 E+ E K + + K + + D FN+ S AQ+ +K Sbjct: 83 EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKKV 142 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168 I LR+NP++ + + G D + N+ GL +H + Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYHNFANINIIGLHYHVGSQ 202 Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 ++ F + I+ I+ GGG+ + R + Sbjct: 203 ILNYQVFQSLAITTNEHIRLLKQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262 Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277 EF E ++ E G ++V + L + VL + VI+D+ + + L + Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 322 Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G C + D+F +++ +K GD ++ Y + Sbjct: 323 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 382 Query: 334 FNGINMPTIAVK 345 +N Sbjct: 383 YNLRPSVQEYFI 394 >gi|298481756|ref|ZP_06999946.1| diaminopimelate decarboxylase [Bacteroides sp. D22] gi|298271978|gb|EFI13549.1| diaminopimelate decarboxylase [Bacteroides sp. D22] Length = 386 Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 63/366 (17%), Positives = 119/366 (32%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + K + A+K A + + + G S Sbjct: 13 LQTPFYYYDTKVLRDTLSAINQEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + + K + FN ++ +L + A Q Sbjct: 73 GEIRAAIRAGFPADKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKI 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP V ++ G +D E + GL FH + Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218 F+ + ++ + +E I++GGG+ + F Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAVPNFKDYFATYA 252 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 + + ++ E G A+V +L + VL + + + + D+ + + L Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQAF 312 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372 Query: 336 GINMPT 341 +P Sbjct: 373 CRELPK 378 >gi|218550088|ref|YP_002383879.1| diaminopimelate decarboxylase [Escherichia fergusonii ATCC 35469] gi|218357629|emb|CAQ90268.1| diaminopimelate decarboxylase, PLP-binding [Escherichia fergusonii ATCC 35469] Length = 420 Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 114/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPLTSPDDIVFTADVIDSATLARVSELRIPVNAGSVDMLEQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHTDLPAALAVIARYELKLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++E IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVSQVI-EFGQELEAISAGGGLSIPYRDGEEAVDTEHYFGLWNAAREQIAHH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V++ +EPG +V + L V + ++ V++D+ + + Sbjct: 259 LGHRVKLEIEPGRFLVAQSGVLIAQVRSVKQMGRRHFVLIDAGFNDLMRPAMYGSYHRIT 318 Query: 282 YPNTGPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRSFDNTPVVETVVAGPLCESGDVFTQQEGGTVETRELPQVAPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|194433017|ref|ZP_03065300.1| diaminopimelate decarboxylase [Shigella dysenteriae 1012] gi|194418744|gb|EDX34830.1| diaminopimelate decarboxylase [Shigella dysenteriae 1012] gi|332088589|gb|EGI93702.1| diaminopimelate decarboxylase [Shigella dysenteriae 155-74] Length = 420 Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFEV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELKIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|153853278|ref|ZP_01994687.1| hypothetical protein DORLON_00673 [Dorea longicatena DSM 13814] gi|149754064|gb|EDM63995.1| hypothetical protein DORLON_00673 [Dorea longicatena DSM 13814] Length = 424 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 61/391 (15%), Positives = 124/391 (31%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N+ N G + A+K + + L +Y G SS Sbjct: 20 PTPFHLYDEKGMRENMKALKEAFSWNKGYREYFAVKATPNPFLINILREYGCGCDCSSYT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML GE ++ E I + ++ ++ + + + I Sbjct: 80 ELMLSDAIGATGEDIMFSSNDTPAEEFVLADKLNAIINLDDITHIDFLEKAIGHIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N ++ G + ++++ G+ Sbjct: 140 CRYNPGGMFKISNDIMDNPGDAKYGMTTEQLFEAFKILKAKGAKEFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + K I++I+L GG+ K + + + + + + Sbjct: 200 YYPMLAKVLFEVAVKLQKETGVHIKFINLSGGVGIPYKPDQEPNDIRAIGDGVRRVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L TT + K + VD+ + + Sbjct: 260 LVPAGMGDVAIYTEMGRFMMGPYGCLVTTAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + +GD + D + + + Sbjct: 320 HITVMGKEDTPCDHKYDVTGSLCENNDKFAIDRMLPKIDMGDILVIHDTGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+ + IR + DY+ Sbjct: 380 NGKLKSAEVLLKEDGSTQLIRRAETPADYFA 410 >gi|291557977|emb|CBL35094.1| Diaminopimelate decarboxylase [Eubacterium siraeum V10Sc8a] Length = 423 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 55/393 (13%), Positives = 113/393 (28%), Gaps = 30/393 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I TP+++ D++ + N G + A+K + + L + G SS Sbjct: 19 IPTPFHIYDEKGIRETARKLYDAFSWNKGFREYFAVKATPNPYLMEILKEEGCGFDCSSY 78 Query: 61 YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-K 117 E+ML + + + A D + I + + ++ Sbjct: 79 TELMLSDKVGAKQHDIMFSSNATPDEDFKLAYKLGAIINLDDFTHIDVLDKLTGIPETIC 138 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKS 171 S+ ++ G + IE+ G+ + Sbjct: 139 CRYNPGGEFKTSEKGNVMDTPKDAKYGMTHEQIIEAYKILKEKGAKRFGMHAFLASNTLT 198 Query: 172 FLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + + + Q+ +I+L GG+ K + + + E K Sbjct: 199 NEYYPVLAGILFRTAVEIKEKTGVQLSFINLSGGVGVPYKPDQPANDIKVIGEGVRKAYE 258 Query: 228 QI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276 +I + E G ++ L + K + +D+ + + Sbjct: 259 EILVPAGMGDVAIFTELGRYMLAPNGALVAKAIREKHIYKEYIGLDACAANLMRPAIYGA 318 Query: 277 ESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + + G C D F + IGD I D + + Sbjct: 319 YHHITVMGKENQPCDHKYDITGGLCENCDKFAVDRMLPKIDIGDIIYIHDTGAHGFSMGY 378 Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 +NG + DG+ K IR + DY+ Sbjct: 379 NYNGKLRSAEVLLKEDGSFKLIRRAETPEDYFA 411 >gi|157150578|ref|YP_001450955.1| diaminopimelate decarboxylase [Streptococcus gordonii str. Challis substr. CH1] gi|157075372|gb|ABV10055.1| diaminopimelate decarboxylase [Streptococcus gordonii str. Challis substr. CH1] Length = 416 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 58/392 (14%), Positives = 120/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEVAGIPKVISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169 V + D ++ G I++ + G+ + N Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSNN 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGKVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + A V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRPEGETEIADVVGSLCENNDKFAINRPLPISEIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEEDGNVRMIRRAERPEDYFATL 409 >gi|325690948|gb|EGD32948.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK115] Length = 416 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 58/392 (14%), Positives = 119/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++G + F G ++ E TI + + K+ A Sbjct: 79 ELLMGQKLGFAGRDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKVISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169 V + D ++ G I++ + G+ + + Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRPMGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409 >gi|322517488|ref|ZP_08070361.1| diaminopimelate decarboxylase [Streptococcus vestibularis ATCC 49124] gi|322123970|gb|EFX95529.1| diaminopimelate decarboxylase [Streptococcus vestibularis ATCC 49124] Length = 421 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 121/393 (30%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 24 PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGCGVDCATDT 83 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKI 118 E+++ ++ F ++ D + + D + A L + + Sbjct: 84 ELVMSNKIGFDSTAISFTSN--DTRAEEFVYARDINATINLDAYEDIFFLEEAAGLPETL 141 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCE 168 LR NP +S + S+ G + + K V H Sbjct: 142 SLRFNPGGVFSLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLHAFLASNTVTN 201 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + + +++I+L GG+ ++ + E + Sbjct: 202 EYYPTLAAQLFELAVEIKNELGVSLDFINLSGGVGVDYTPANKQNDIAVIGEGVHTKFDE 261 Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I Y E G + + T VL I + + V VD+S + + Sbjct: 262 ILVPNDLGDISIYTELGRFMTAPHGLVVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAY 321 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F + +IGD + D + + + Sbjct: 322 HHITNMTNPNGDIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNY 381 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DGT + IR + NDY+ L Sbjct: 382 NGRLRSAEILYQEDGTARMIRRAETMNDYFATL 414 >gi|261839146|gb|ACX98911.1| diaminopimelate decarboxylase [Helicobacter pylori 52] Length = 405 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 12 KTPFYLYDFGKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLASLESGADCVSIGE 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ K + N + + +L + AQ L K Sbjct: 72 IHRALKAGIKPYRIVFSGVGKSESEIEQALKLNILFLNVESFMELTTIETIAQSLGIKAR 131 Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + RINP++ ++ G K+ +E S + FH + Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224 + I K + + +GGGI + ++ D+ QR+ + Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + I EPG +IV + L T VL K VIVD+ + + L + + A Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311 Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 V G C + D F + ++ GD++ E V Y + + +N Sbjct: 312 TPYKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396 >gi|282853784|ref|ZP_06263121.1| diaminopimelate decarboxylase [Propionibacterium acnes J139] gi|282583237|gb|EFB88617.1| diaminopimelate decarboxylase [Propionibacterium acnes J139] gi|314981443|gb|EFT25537.1| diaminopimelate decarboxylase [Propionibacterium acnes HL110PA3] gi|315092108|gb|EFT64084.1| diaminopimelate decarboxylase [Propionibacterium acnes HL110PA4] Length = 476 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 66/403 (16%), Positives = 129/403 (32%), Gaps = 43/403 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D+ L + A K F + ++Q + + E Sbjct: 63 GSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTIASWIDQEGLFLDTCTGGE 120 Query: 63 VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 ++ + + K D A+ II +++ ++ + + ++ H + Sbjct: 121 LITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G S+ ++ G+ H + Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ 240 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +K +E+ + + + LGGG + L + Sbjct: 241 IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE 300 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267 I LEPG AIV TT TV + + V VD + Sbjct: 301 IVTVEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD 360 Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 ++ L E + + N P + G+ C AGDI + V GD I+ Sbjct: 361 NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSYNDYYN 364 Y+ + + +N + P + N D G + +R + +D Sbjct: 421 AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDLLA 463 >gi|50842737|ref|YP_055964.1| diaminopimelate decarboxylase [Propionibacterium acnes KPA171202] gi|289425258|ref|ZP_06427035.1| diaminopimelate decarboxylase [Propionibacterium acnes SK187] gi|289428558|ref|ZP_06430242.1| diaminopimelate decarboxylase [Propionibacterium acnes J165] gi|295130818|ref|YP_003581481.1| diaminopimelate decarboxylase [Propionibacterium acnes SK137] gi|50840339|gb|AAT83006.1| diaminopimelate decarboxylase [Propionibacterium acnes KPA171202] gi|289154236|gb|EFD02924.1| diaminopimelate decarboxylase [Propionibacterium acnes SK187] gi|289158252|gb|EFD06471.1| diaminopimelate decarboxylase [Propionibacterium acnes J165] gi|291375992|gb|ADD99846.1| diaminopimelate decarboxylase [Propionibacterium acnes SK137] gi|313764209|gb|EFS35573.1| diaminopimelate decarboxylase [Propionibacterium acnes HL013PA1] gi|313772070|gb|EFS38036.1| diaminopimelate decarboxylase [Propionibacterium acnes HL074PA1] gi|313801617|gb|EFS42857.1| diaminopimelate decarboxylase [Propionibacterium acnes HL110PA2] gi|313807761|gb|EFS46248.1| diaminopimelate decarboxylase [Propionibacterium acnes HL087PA2] gi|313810269|gb|EFS47990.1| diaminopimelate decarboxylase [Propionibacterium acnes HL083PA1] gi|313812703|gb|EFS50417.1| diaminopimelate decarboxylase [Propionibacterium acnes HL025PA1] gi|313816302|gb|EFS54016.1| diaminopimelate decarboxylase [Propionibacterium acnes HL059PA1] gi|313818797|gb|EFS56511.1| diaminopimelate decarboxylase [Propionibacterium acnes HL046PA2] gi|313820570|gb|EFS58284.1| diaminopimelate decarboxylase [Propionibacterium acnes HL036PA1] gi|313822625|gb|EFS60339.1| diaminopimelate decarboxylase [Propionibacterium acnes HL036PA2] gi|313825441|gb|EFS63155.1| diaminopimelate decarboxylase [Propionibacterium acnes HL063PA1] gi|313827405|gb|EFS65119.1| diaminopimelate decarboxylase [Propionibacterium acnes HL063PA2] gi|313830599|gb|EFS68313.1| diaminopimelate decarboxylase [Propionibacterium acnes HL007PA1] gi|313833636|gb|EFS71350.1| diaminopimelate decarboxylase [Propionibacterium acnes HL056PA1] gi|313838330|gb|EFS76044.1| diaminopimelate decarboxylase [Propionibacterium acnes HL086PA1] gi|314915687|gb|EFS79518.1| diaminopimelate decarboxylase [Propionibacterium acnes HL005PA4] gi|314917946|gb|EFS81777.1| diaminopimelate decarboxylase [Propionibacterium acnes HL050PA1] gi|314920327|gb|EFS84158.1| diaminopimelate decarboxylase [Propionibacterium acnes HL050PA3] gi|314924934|gb|EFS88765.1| diaminopimelate decarboxylase [Propionibacterium acnes HL036PA3] gi|314931547|gb|EFS95378.1| diaminopimelate decarboxylase [Propionibacterium acnes HL067PA1] gi|314955477|gb|EFS99882.1| diaminopimelate decarboxylase [Propionibacterium acnes HL027PA1] gi|314957932|gb|EFT02035.1| diaminopimelate decarboxylase [Propionibacterium acnes HL002PA1] gi|314960541|gb|EFT04643.1| diaminopimelate decarboxylase [Propionibacterium acnes HL002PA2] gi|314962556|gb|EFT06656.1| diaminopimelate decarboxylase [Propionibacterium acnes HL082PA1] gi|314967580|gb|EFT11679.1| diaminopimelate decarboxylase [Propionibacterium acnes HL037PA1] gi|314973601|gb|EFT17697.1| diaminopimelate decarboxylase [Propionibacterium acnes HL053PA1] gi|314975823|gb|EFT19918.1| diaminopimelate decarboxylase [Propionibacterium acnes HL045PA1] gi|314978712|gb|EFT22806.1| diaminopimelate decarboxylase [Propionibacterium acnes HL072PA2] gi|314983699|gb|EFT27791.1| diaminopimelate decarboxylase [Propionibacterium acnes HL005PA1] gi|314987879|gb|EFT31970.1| diaminopimelate decarboxylase [Propionibacterium acnes HL005PA2] gi|314989690|gb|EFT33781.1| diaminopimelate decarboxylase [Propionibacterium acnes HL005PA3] gi|315077770|gb|EFT49821.1| diaminopimelate decarboxylase [Propionibacterium acnes HL053PA2] gi|315080397|gb|EFT52373.1| diaminopimelate decarboxylase [Propionibacterium acnes HL078PA1] gi|315085411|gb|EFT57387.1| diaminopimelate decarboxylase [Propionibacterium acnes HL002PA3] gi|315088531|gb|EFT60507.1| diaminopimelate decarboxylase [Propionibacterium acnes HL072PA1] gi|315095874|gb|EFT67850.1| diaminopimelate decarboxylase [Propionibacterium acnes HL038PA1] gi|315098778|gb|EFT70754.1| diaminopimelate decarboxylase [Propionibacterium acnes HL059PA2] gi|315101451|gb|EFT73427.1| diaminopimelate decarboxylase [Propionibacterium acnes HL046PA1] gi|315105824|gb|EFT77800.1| diaminopimelate decarboxylase [Propionibacterium acnes HL030PA1] gi|315108743|gb|EFT80719.1| diaminopimelate decarboxylase [Propionibacterium acnes HL030PA2] gi|327326425|gb|EGE68215.1| diaminopimelate decarboxylase [Propionibacterium acnes HL096PA2] gi|327329881|gb|EGE71635.1| diaminopimelate decarboxylase [Propionibacterium acnes HL097PA1] gi|327331700|gb|EGE73437.1| diaminopimelate decarboxylase [Propionibacterium acnes HL096PA3] gi|327443476|gb|EGE90130.1| diaminopimelate decarboxylase [Propionibacterium acnes HL013PA2] gi|327445679|gb|EGE92333.1| diaminopimelate decarboxylase [Propionibacterium acnes HL043PA2] gi|327448337|gb|EGE94991.1| diaminopimelate decarboxylase [Propionibacterium acnes HL043PA1] gi|327450538|gb|EGE97192.1| diaminopimelate decarboxylase [Propionibacterium acnes HL087PA3] gi|327454123|gb|EGF00778.1| diaminopimelate decarboxylase [Propionibacterium acnes HL083PA2] gi|328753206|gb|EGF66822.1| diaminopimelate decarboxylase [Propionibacterium acnes HL025PA2] gi|328753953|gb|EGF67569.1| diaminopimelate decarboxylase [Propionibacterium acnes HL087PA1] gi|328754688|gb|EGF68304.1| diaminopimelate decarboxylase [Propionibacterium acnes HL020PA1] gi|328760884|gb|EGF74449.1| diaminopimelate decarboxylase [Propionibacterium acnes HL099PA1] gi|332675662|gb|AEE72478.1| diaminopimelate decarboxylase [Propionibacterium acnes 266] Length = 476 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 66/403 (16%), Positives = 129/403 (32%), Gaps = 43/403 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D+ L + A K F + ++Q + + E Sbjct: 63 GSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTIASWIDQEGLFLDTCTGGE 120 Query: 63 VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 ++ + + K D A+ II +++ ++ + + ++ H + Sbjct: 121 LITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G S+ ++ G+ H + Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ 240 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +K +E+ + + + LGGG + L + Sbjct: 241 IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE 300 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267 I LEPG AIV TT TV + + V VD + Sbjct: 301 IVTLEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD 360 Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 ++ L E + + N P + G+ C AGDI + V GD I+ Sbjct: 361 NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSYNDYYN 364 Y+ + + +N + P + N D G + +R + +D Sbjct: 421 AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDLLA 463 >gi|170765517|ref|ZP_02900328.1| diaminopimelate decarboxylase [Escherichia albertii TW07627] gi|170124663|gb|EDS93594.1| diaminopimelate decarboxylase [Escherichia albertii TW07627] Length = 420 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 116/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAVLKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + ++ L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSIDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G + I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALEVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ K Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTKHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + + V+VD+ + + Sbjct: 259 LGHHVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRRFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEYAPTVETVVAGPLCESGDVFTQQEGGKVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + ++ Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTISELLA 416 >gi|313791900|gb|EFS40001.1| diaminopimelate decarboxylase [Propionibacterium acnes HL110PA1] gi|327453381|gb|EGF00036.1| diaminopimelate decarboxylase [Propionibacterium acnes HL092PA1] Length = 476 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 66/403 (16%), Positives = 129/403 (32%), Gaps = 43/403 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D+ L + A K F + ++Q + + E Sbjct: 63 GSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTIASWIDQEGLFLDTCTGGE 120 Query: 63 VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 ++ + + K D A+ II +++ ++ + + ++ H + Sbjct: 121 LITALQGGMDPSRIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G S+ ++ G+ H + Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ 240 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +K +E+ + + + LGGG + L + Sbjct: 241 IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE 300 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267 I LEPG AIV TT TV + + V VD + Sbjct: 301 IVTLEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD 360 Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 ++ L E + + N P + G+ C AGDI + V GD I+ Sbjct: 361 NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSYNDYYN 364 Y+ + + +N + P + N D G + +R + +D Sbjct: 421 AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDLLA 463 >gi|56751260|ref|YP_171961.1| diaminopimelate decarboxylase [Synechococcus elongatus PCC 6301] gi|81299073|ref|YP_399281.1| diaminopimelate decarboxylase [Synechococcus elongatus PCC 7942] gi|56686219|dbj|BAD79441.1| diaminopimelate decarboxylase [Synechococcus elongatus PCC 6301] gi|81167954|gb|ABB56294.1| diaminopimelate decarboxylase [Synechococcus elongatus PCC 7942] Length = 464 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 51/396 (12%), Positives = 110/396 (27%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+Q L + + + A K + + + Q G S Sbjct: 59 GSPLYILDEQTLRAACQSYRSALAHHYPGAALPIYASKAWNCLAVCALVAQEGLGIDVVS 118 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117 E+ + ++ K A+ I+ + +L + A + ++ Sbjct: 119 AGELYTALQAGVPSDRLYFHGNNKSLSELAMGVEAGCTIVVDNWQELRNLEAIAAEQQRE 178 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168 + + I P + S+ G ++ GL H + Sbjct: 179 VRVMIRFTPGIECHTHEYIRTGHLDSKFGFDPDQLDALLAALVDQPYLRCIGLHAHIGSQ 238 Query: 169 NKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + + + + I +++GGG+ + + Sbjct: 239 IFELQPHADLAGVLVGAYAKALALGLPIAELNVGGGLGIRYTESDDPPSIDEWVRQVSES 298 Query: 226 S-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 ++ EPG +++ + E VD + + Sbjct: 299 LVAACQAADLPLPKLICEPGRSLIGTACVTAYQIGSRKEVPGIRTYLAVDGGMSDNPRPI 358 Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 A + T V G+ C +GD+ + P + GD + YN Sbjct: 359 TYQSTYRAVIANRLNVSDRETVTVAGKHCESGDVLLKDAELAPSQPGDILVVLATGAYNY 418 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + N + S D Sbjct: 419 SMASNYNRIARPAAVLVNNGEAQIILARESLQDLLR 454 >gi|331674321|ref|ZP_08375081.1| diaminopimelate decarboxylase [Escherichia coli TA280] gi|331068415|gb|EGI39810.1| diaminopimelate decarboxylase [Escherichia coli TA280] Length = 420 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQSHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|170683211|ref|YP_001745007.1| diaminopimelate decarboxylase [Escherichia coli SMS-3-5] gi|170520929|gb|ACB19107.1| diaminopimelate decarboxylase [Escherichia coli SMS-3-5] Length = 420 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|159903637|ref|YP_001550981.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9211] gi|159888813|gb|ABX09027.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9211] Length = 455 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 53/396 (13%), Positives = 114/396 (28%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y+ID+ + ++ K + +L A K ++ + + G S Sbjct: 48 GTPLYVIDEASIRSSCRAYRKALKQSYPGDSFVLYASKANSSLAIDRIVASEGLGIDVVS 107 Query: 60 LYEVMLGHE-KFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + GE + D E+ + TII + + + Sbjct: 108 EGELITALKSGVAGEQIVLHGNNKSDKELLLAHESNATIIIDNQHDIQRLDKLISHKEGS 167 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCE 168 + L + P + S+ G + + + + GL H + Sbjct: 168 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPEQVSDTFAQLKDYKWAKLVGLHAHIGSQ 227 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC---------Q 216 +++ + F I+ +++GGG+ Sbjct: 228 IFELSPHMDLVEVMADFFLRAKDLGHPIKDLNIGGGLGVKYIPSDDPPDIYSWVETVSNA 287 Query: 217 RLKEFSEKYS--VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272 +K F + ++ EPG +I+ + + K + +D + + Sbjct: 288 VIKAFDTRNIELPRLICEPGRSIIATAGLTLYRIGARKDIPGGKTYLSIDGGMSDNPRPI 347 Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + + G+ C +GDI GD + YN+ Sbjct: 348 TYQSTYTACLVDRPLANTDQVVTIAGKHCESGDILLNNIALPTASSGDVLGVFGTGAYNL 407 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + N + D Sbjct: 408 SMSSNYNRIPRPASVLVNNAQSDLVQVRELPEDLLR 443 >gi|293412184|ref|ZP_06654907.1| diaminopimelate decarboxylase [Escherichia coli B354] gi|291468955|gb|EFF11446.1| diaminopimelate decarboxylase [Escherichia coli B354] Length = 420 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|110643006|ref|YP_670736.1| diaminopimelate decarboxylase [Escherichia coli 536] gi|218690964|ref|YP_002399176.1| diaminopimelate decarboxylase [Escherichia coli ED1a] gi|218701553|ref|YP_002409182.1| diaminopimelate decarboxylase [Escherichia coli IAI39] gi|218706332|ref|YP_002413851.1| diaminopimelate decarboxylase [Escherichia coli UMN026] gi|293406327|ref|ZP_06650253.1| diaminopimelate decarboxylase [Escherichia coli FVEC1412] gi|298382063|ref|ZP_06991660.1| diaminopimelate decarboxylase [Escherichia coli FVEC1302] gi|300898100|ref|ZP_07116466.1| diaminopimelate decarboxylase [Escherichia coli MS 198-1] gi|301027487|ref|ZP_07190824.1| diaminopimelate decarboxylase [Escherichia coli MS 69-1] gi|306812257|ref|ZP_07446455.1| diaminopimelate decarboxylase [Escherichia coli NC101] gi|331648599|ref|ZP_08349687.1| diaminopimelate decarboxylase [Escherichia coli M605] gi|331658986|ref|ZP_08359928.1| diaminopimelate decarboxylase [Escherichia coli TA206] gi|331664401|ref|ZP_08365307.1| diaminopimelate decarboxylase [Escherichia coli TA143] gi|331684482|ref|ZP_08385074.1| diaminopimelate decarboxylase [Escherichia coli H299] gi|110344598|gb|ABG70835.1| diaminopimelate decarboxylase [Escherichia coli 536] gi|218371539|emb|CAR19377.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli IAI39] gi|218428528|emb|CAR09455.2| diaminopimelate decarboxylase, PLP-binding [Escherichia coli ED1a] gi|218433429|emb|CAR14331.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli UMN026] gi|222034553|emb|CAP77295.1| Diaminopimelate decarboxylase [Escherichia coli LF82] gi|281179863|dbj|BAI56193.1| diaminopimelate decarboxylase [Escherichia coli SE15] gi|284922775|emb|CBG35863.1| diaminopimelate decarboxylase [Escherichia coli 042] gi|291426333|gb|EFE99365.1| diaminopimelate decarboxylase [Escherichia coli FVEC1412] gi|298277203|gb|EFI18719.1| diaminopimelate decarboxylase [Escherichia coli FVEC1302] gi|300358158|gb|EFJ74028.1| diaminopimelate decarboxylase [Escherichia coli MS 198-1] gi|300394995|gb|EFJ78533.1| diaminopimelate decarboxylase [Escherichia coli MS 69-1] gi|305854295|gb|EFM54733.1| diaminopimelate decarboxylase [Escherichia coli NC101] gi|312947390|gb|ADR28217.1| diaminopimelate decarboxylase [Escherichia coli O83:H1 str. NRG 857C] gi|315295748|gb|EFU55065.1| diaminopimelate decarboxylase [Escherichia coli MS 16-3] gi|330908891|gb|EGH37405.1| diaminopimelate decarboxylase [Escherichia coli AA86] gi|331042346|gb|EGI14488.1| diaminopimelate decarboxylase [Escherichia coli M605] gi|331053568|gb|EGI25597.1| diaminopimelate decarboxylase [Escherichia coli TA206] gi|331058332|gb|EGI30313.1| diaminopimelate decarboxylase [Escherichia coli TA143] gi|331078097|gb|EGI49303.1| diaminopimelate decarboxylase [Escherichia coli H299] Length = 420 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|26249270|ref|NP_755310.1| diaminopimelate decarboxylase [Escherichia coli CFT073] gi|215488157|ref|YP_002330588.1| diaminopimelate decarboxylase [Escherichia coli O127:H6 str. E2348/69] gi|227888404|ref|ZP_04006209.1| diaminopimelate decarboxylase [Escherichia coli 83972] gi|300980450|ref|ZP_07175005.1| diaminopimelate decarboxylase [Escherichia coli MS 45-1] gi|301049368|ref|ZP_07196332.1| diaminopimelate decarboxylase [Escherichia coli MS 185-1] gi|312964885|ref|ZP_07779125.1| diaminopimelate decarboxylase [Escherichia coli 2362-75] gi|26109677|gb|AAN81880.1|AE016765_282 Diaminopimelate decarboxylase [Escherichia coli CFT073] gi|215266229|emb|CAS10656.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O127:H6 str. E2348/69] gi|227834673|gb|EEJ45139.1| diaminopimelate decarboxylase [Escherichia coli 83972] gi|300298810|gb|EFJ55195.1| diaminopimelate decarboxylase [Escherichia coli MS 185-1] gi|300409257|gb|EFJ92795.1| diaminopimelate decarboxylase [Escherichia coli MS 45-1] gi|307554833|gb|ADN47608.1| diaminopimelate decarboxylase [Escherichia coli ABU 83972] gi|312290441|gb|EFR18321.1| diaminopimelate decarboxylase [Escherichia coli 2362-75] gi|315293830|gb|EFU53182.1| diaminopimelate decarboxylase [Escherichia coli MS 153-1] gi|320194974|gb|EFW69603.1| Diaminopimelate decarboxylase [Escherichia coli WV_060327] gi|324005608|gb|EGB74827.1| diaminopimelate decarboxylase [Escherichia coli MS 57-2] Length = 420 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAAEGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|319936660|ref|ZP_08011073.1| diaminopimelate decarboxylase [Coprobacillus sp. 29_1] gi|319808217|gb|EFW04782.1| diaminopimelate decarboxylase [Coprobacillus sp. 29_1] Length = 436 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 125/398 (31%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ + + ++ K V L A K F+ ++ +Y G S Sbjct: 30 GTPLYVMSEGHMRYQMNELKEKFLDKYENVLPLFASKSFSCLEIYKLAKEYGIGIDCVSA 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + F ++ K + D + + +++ ++ A KL+K Sbjct: 90 GEISIALKAGFDPHKIYFHGNNKLPSEIEYAITHDVDHFVIDNFHEIDLVEEIATKLNKT 149 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +R+ P + ++ G + I S G+ H Sbjct: 150 IYATVRVVPEIKAGGHGFIQTGHKDTKFGFSARHGIYLDAIQKIINSHSIQFEGIHCHIG 209 Query: 167 CENKSFLCFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + + +K + + + I+ GGG + + Sbjct: 210 SQVFDLYAYVSAMKRFVGFAYEIYDKLGVMVTKINAGGGYGIAYTKKDEPLDFEVITTEI 269 Query: 223 EKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 K + +EPG +V N T+ + E V + ++ Sbjct: 270 MKTIQEGYEKRGWDMPMVLVEPGRYVVGNAGITLYTIGTVKEIPDVRTYVSIDGGMTDNI 329 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + I N A + G+ C +GDI + + GD + Sbjct: 330 RTCLYDADYDGIIVNKAEEPKTLKATISGKVCESGDIVVKEVKIAKPEPGDIFAQFSTGA 389 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y+ + + +N + P + + + IR +++D Sbjct: 390 YHYSMASNYNQLPKPAVVFTYKGKSKRVIRRQTFDDLI 427 >gi|15803358|ref|NP_289391.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 EDL933] gi|15832949|ref|NP_311722.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. Sakai] gi|168747702|ref|ZP_02772724.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4113] gi|168753756|ref|ZP_02778763.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4401] gi|168759947|ref|ZP_02784954.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4501] gi|168766812|ref|ZP_02791819.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4486] gi|168775696|ref|ZP_02800703.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4196] gi|168778833|ref|ZP_02803840.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4076] gi|168785664|ref|ZP_02810671.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC869] gi|168799952|ref|ZP_02824959.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC508] gi|195936442|ref|ZP_03081824.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4024] gi|208808464|ref|ZP_03250801.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4206] gi|208814582|ref|ZP_03255911.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4045] gi|208821663|ref|ZP_03261983.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4042] gi|209399305|ref|YP_002272302.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4115] gi|217327343|ref|ZP_03443426.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. TW14588] gi|254794777|ref|YP_003079614.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. TW14359] gi|261226137|ref|ZP_05940418.1| diaminopimelate decarboxylase, PLP-binding protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256607|ref|ZP_05949140.1| diaminopimelate decarboxylase, PLP-binding protein [Escherichia coli O157:H7 str. FRIK966] gi|12517327|gb|AAG57950.1|AE005512_9 diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EDL933] gi|13363167|dbj|BAB37118.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. Sakai] gi|187768808|gb|EDU32652.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4196] gi|188017893|gb|EDU56015.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4113] gi|189003434|gb|EDU72420.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4076] gi|189358681|gb|EDU77100.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4401] gi|189363642|gb|EDU82061.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4486] gi|189369323|gb|EDU87739.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4501] gi|189374225|gb|EDU92641.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC869] gi|189377664|gb|EDU96080.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC508] gi|208728265|gb|EDZ77866.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4206] gi|208735859|gb|EDZ84546.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4045] gi|208741786|gb|EDZ89468.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4042] gi|209160705|gb|ACI38138.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4115] gi|209760940|gb|ACI78782.1| diaminopimelate decarboxylase [Escherichia coli] gi|209760942|gb|ACI78783.1| diaminopimelate decarboxylase [Escherichia coli] gi|209760946|gb|ACI78785.1| diaminopimelate decarboxylase [Escherichia coli] gi|217319710|gb|EEC28135.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. TW14588] gi|254594177|gb|ACT73538.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O157:H7 str. TW14359] gi|320189168|gb|EFW63827.1| Diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC1212] gi|326339093|gb|EGD62908.1| Diaminopimelate decarboxylase [Escherichia coli O157:H7 str. 1044] gi|326343025|gb|EGD66793.1| Diaminopimelate decarboxylase [Escherichia coli O157:H7 str. 1125] Length = 420 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 56/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V ++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMFDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVEPRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|210622918|ref|ZP_03293441.1| hypothetical protein CLOHIR_01389 [Clostridium hiranonis DSM 13275] gi|210154023|gb|EEA85029.1| hypothetical protein CLOHIR_01389 [Clostridium hiranonis DSM 13275] Length = 430 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 134/399 (33%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y+ D+Q + +N K G ++ A K F M + + S Sbjct: 29 KTPLYVFDEQLIRDNCREYRKYFKAEENGNRVAYAGKAFLPGYMCRLIKEEKMCLDVVSG 88 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E+ H+ F E ++ K E + + + +L+ ++ ++ Sbjct: 89 GELYTAHKSGFPMENIFFHGNNKTREEVEMGVEYGVGKFVVDNFYELDLLEEICEREDKV 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 ++I RI P + + S+ G + E + + GL H Sbjct: 149 QEIYFRITPGIEAHTHEYIKTGQIDSKFGFALVNGDLYNAIEKLKEYKRVKLVGLHAHIG 208 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRL 218 + F M+K +++ ++ ++ + LGGG+ + FC+ + Sbjct: 209 SQIFELEPFLDEVDVMMKLVKEIKENYGIELTDVDLGGGVGVYYTEEDKPRAIKDFCEAI 268 Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +EK + +EPG +++ N + T+ I + V V + ++ Sbjct: 269 IDRAEKTCAELGMEVPHLVIEPGRSVIANAGSTLYTIGSIKDIKDVRVYVSVDGGMTDNI 328 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + N + G+ C +GDI ++ GD + Sbjct: 329 RPSLYHAGYECSIVNKMNGDTENRVTIAGKCCESGDILINNVAISEIESGDILITTSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I P + R ++ D Sbjct: 389 YGYSMASNYNKIQKPAVIAVKNGEITPVCRRQTFEDVLA 427 >gi|293416082|ref|ZP_06658722.1| diaminopimelate decarboxylase [Escherichia coli B185] gi|291432271|gb|EFF05253.1| diaminopimelate decarboxylase [Escherichia coli B185] Length = 420 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|261879429|ref|ZP_06005856.1| diaminopimelate decarboxylase [Prevotella bergensis DSM 17361] gi|270333998|gb|EFA44784.1| diaminopimelate decarboxylase [Prevotella bergensis DSM 17361] Length = 393 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 58/366 (15%), Positives = 113/366 (30%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+Y D L DT K + A+K A + + G S Sbjct: 13 LPTPFYYYDTDLLRQTTDTVRREAGKYEDFVVHYAVKANANPKILGMICASGLGADCVSG 72 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F Y K A+ + ++ +L + A + + Sbjct: 73 GEIQACLDAGFSPNKIVYAGVGKSDWEINLALEAGIFCFNVESMPELEIINELAAAKNVT 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE 168 I LRINP V ++ G + + N GL FH + Sbjct: 133 AGICLRINPDVDAHTHANITTGLAENKFGIAMNEMETAVLKATSLSNINFMGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F + ++ ++ +++GGG+ + F+ + Sbjct: 193 ILEMNDFEKLCNRINALQDLLEARGIVVKELNVGGGLGVDYEVPDQHPIPDFETYFATYH 252 Query: 226 SV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLY-- 275 +++ E G AIV TL + L + + + D+ + + L Sbjct: 253 HHLKRRPGQRVHFELGRAIVAQMGTLISRTLYVKQGTHKKFAILDAGMTELIRPALYQAL 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + V G C + D+F + + + GD ++ Y + + +N Sbjct: 313 HKIENLSSKAPQERYDVVGPICESSDVFAKDYLLNQLHRGDLVAIRSSGAYGESMASQYN 372 Query: 336 GINMPT 341 +P Sbjct: 373 CRKLPK 378 >gi|256019366|ref|ZP_05433231.1| diaminopimelate decarboxylase [Shigella sp. D9] gi|332280484|ref|ZP_08392897.1| diaminopimelate decarboxylase [Shigella sp. D9] gi|332102836|gb|EGJ06182.1| diaminopimelate decarboxylase [Shigella sp. D9] Length = 420 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDVGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|74313409|ref|YP_311828.1| diaminopimelate decarboxylase [Shigella sonnei Ss046] gi|157157020|ref|YP_001464173.1| diaminopimelate decarboxylase [Escherichia coli E24377A] gi|260856951|ref|YP_003230842.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O26:H11 str. 11368] gi|260869518|ref|YP_003235920.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O111:H- str. 11128] gi|300820628|ref|ZP_07100779.1| diaminopimelate decarboxylase [Escherichia coli MS 119-7] gi|331678817|ref|ZP_08379491.1| diaminopimelate decarboxylase [Escherichia coli H591] gi|73856886|gb|AAZ89593.1| diaminopimelate decarboxylase [Shigella sonnei Ss046] gi|157079050|gb|ABV18758.1| diaminopimelate decarboxylase [Escherichia coli E24377A] gi|257755600|dbj|BAI27102.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O26:H11 str. 11368] gi|257765874|dbj|BAI37369.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O111:H- str. 11128] gi|300526892|gb|EFK47961.1| diaminopimelate decarboxylase [Escherichia coli MS 119-7] gi|320656528|gb|EFX24424.1| diaminopimelate decarboxylase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662047|gb|EFX29448.1| diaminopimelate decarboxylase [Escherichia coli O55:H7 str. USDA 5905] gi|323154816|gb|EFZ41010.1| diaminopimelate decarboxylase [Escherichia coli EPECa14] gi|323167952|gb|EFZ53642.1| diaminopimelate decarboxylase [Shigella sonnei 53G] gi|323180275|gb|EFZ65827.1| diaminopimelate decarboxylase [Escherichia coli 1180] gi|331073647|gb|EGI44968.1| diaminopimelate decarboxylase [Escherichia coli H591] Length = 420 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|320182254|gb|EFW57157.1| Diaminopimelate decarboxylase [Shigella boydii ATCC 9905] gi|332087341|gb|EGI92469.1| diaminopimelate decarboxylase [Shigella boydii 5216-82] gi|332999594|gb|EGK19179.1| diaminopimelate decarboxylase [Shigella flexneri VA-6] Length = 420 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFEV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|300815742|ref|ZP_07095966.1| diaminopimelate decarboxylase [Escherichia coli MS 107-1] gi|300531671|gb|EFK52733.1| diaminopimelate decarboxylase [Escherichia coli MS 107-1] Length = 420 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 117/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCVAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|259503055|ref|ZP_05745957.1| diaminopimelate decarboxylase [Lactobacillus antri DSM 16041] gi|259168921|gb|EEW53416.1| diaminopimelate decarboxylase [Lactobacillus antri DSM 16041] Length = 468 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 67/399 (16%), Positives = 122/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D ++ + + ++ V + A K FAA M+ +Q S Sbjct: 61 GTPLVVYDVSRIRQQIRAFKRVFEDNQVDYAVSYASKAFAAIAMYQLADQEGAHVDVVSG 120 Query: 61 YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F +++ K D + AV +N ++ + ++ L Sbjct: 121 GEMYTALKADFPLSHASFHGNNKSYDELVLAVKNNIGVVVVDNFYEITLLNQVLADLDAH 180 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LRI P +S + S+ G + + S + GL H Sbjct: 181 VKVMLRITPGISAHTNKYIQTGQVDSKFGFDLESGQADRALEAVLASPRMTMVGLHAHIG 240 Query: 167 CENKSFLCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTD--------KDYPVKDF 214 + F + + Q + I++GGG + V Sbjct: 241 SQIFELAGFEGVANKLVAVASHWQQKYDYQAQVINVGGGFGIRYTKADQPLRPEEFVDAI 300 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + +K I++EPG +IV TV + V + ++ Sbjct: 301 IKAIKAAVTPTALEMPAIWIEPGRSIVGPAGFNLYTVGSRKDLPGYRPFVTVDGGMGDNI 360 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E T+ + G+ C +GDI + K GD ++ D Sbjct: 361 RPALYQAEYETVLARDPQAPLTEHVRLAGKYCESGDILSQDQALPATKPGDVLAMLDTGA 420 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N P + + I SY D Sbjct: 421 YGYAMASNYNRNPRPAVVFAENGHSQLVIERESYEDLVR 459 >gi|189467084|ref|ZP_03015869.1| hypothetical protein BACINT_03467 [Bacteroides intestinalis DSM 17393] gi|189435348|gb|EDV04333.1| hypothetical protein BACINT_03467 [Bacteroides intestinalis DSM 17393] Length = 386 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 122/365 (33%), Gaps = 26/365 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L K ++ A+K A + + + G S Sbjct: 13 LRTPFYYYDTKVLRDTLSCVRAEAAKYGNFEVHYAVKANANSKVLSIIRENGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 EV F + K ++ N ++ +L + A + Sbjct: 73 GEVRAAVKAGFPTNKIVFAGVGKSDWEINLSLDYNIFCFNVESIPELEIINELAAAKGKV 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP+V ++ G +D +E + GL FH + Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMQDMDHVIEVALEMKNVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218 F+ + ++ + +IE I++GGG+ K + F Sbjct: 193 ILDMGDFVALCNRVNELQDKLEAHRIRIEHINVGGGLGIDYKHPNRQAIPDFKDYFSTYA 252 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275 + + ++ E G AI +L + VL + + + D+ + + L Y Sbjct: 253 EHLKLRSYQTLHFELGRAITGQCGSLISQVLYVKQGANKKFAILDAGMTDLIRPALYQAY 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + I V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKIENITSEDAVEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASSYN 372 Query: 336 GINMP 340 +P Sbjct: 373 CRELP 377 >gi|167765998|ref|ZP_02438051.1| hypothetical protein CLOSS21_00489 [Clostridium sp. SS2/1] gi|167712355|gb|EDS22934.1| hypothetical protein CLOSS21_00489 [Clostridium sp. SS2/1] gi|291558790|emb|CBL37590.1| Diaminopimelate decarboxylase [butyrate-producing bacterium SSC/2] Length = 416 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 112/391 (28%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + GT SSL Sbjct: 20 PTPFHLYDEKGIRETARGLYKAFSWNKGFKEYFAVKATPNPTILKILKEEGCGTDCSSLT 79 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G ++ E TI + ++ + K+ A K Sbjct: 80 ELMMSDRCGFDGSEIMFSSNDTPAEEFILAKQLGATINLDDITHIEFLKECAGIPEKISC 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFH------NNCEN 169 V + D ++ G + E+ + V H Sbjct: 140 RYNPGGVFALGTDIMDNPG-DAKYGMTTEQIFEAFKQLKELGVKEFGIHSFLASNTVTNE 198 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + K I +I+L GG+ + + E K + Sbjct: 199 YYPTLAKQLFELAVKLKEEVGVHIGFINLSGGVGIPYLPDQEGNDIAVIGEGVHKVYDEV 258 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T + K + VD+ + + Sbjct: 259 LVPAGMGDVKIFTELGRYMLAPNGHLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 318 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + G C D F + +GD + D + + Sbjct: 319 HITVMGKENEPADHVYDITGSLCENNDKFAIDRKLPKIDMGDLLVIHDTGAHGFAMGYNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DGT + IR + DY+ Sbjct: 379 NGKLKSAEILLKEDGTTEMIRRAETPEDYFA 409 >gi|237715165|ref|ZP_04545646.1| diaminopimelate decarboxylase [Bacteroides sp. D1] gi|262408884|ref|ZP_06085429.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_22] gi|294644345|ref|ZP_06722111.1| diaminopimelate decarboxylase [Bacteroides ovatus SD CC 2a] gi|294810703|ref|ZP_06769351.1| diaminopimelate decarboxylase [Bacteroides xylanisolvens SD CC 1b] gi|229444998|gb|EEO50789.1| diaminopimelate decarboxylase [Bacteroides sp. D1] gi|262353095|gb|EEZ02190.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_22] gi|292640315|gb|EFF58567.1| diaminopimelate decarboxylase [Bacteroides ovatus SD CC 2a] gi|294442036|gb|EFG10855.1| diaminopimelate decarboxylase [Bacteroides xylanisolvens SD CC 1b] Length = 386 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 63/366 (17%), Positives = 119/366 (32%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + K + A+K A + + + G S Sbjct: 13 LQTPFYYYDTKVLRDTLSAINQEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + + K + FN ++ +L + A Q Sbjct: 73 GEIRAAIRAGFPADKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKV 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP V ++ G +D E + GL FH + Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218 F+ + ++ + +E I++GGG+ + F Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFATYA 252 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 + + ++ E G A+V +L + VL + + + + D+ + + L Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQAF 312 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372 Query: 336 GINMPT 341 +P Sbjct: 373 CRELPK 378 >gi|39654106|pdb|1KNW|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase gi|39654107|pdb|1KO0|A Chain A, Crystal Structure Of A D,L-Lysine Complex Of Diaminopimelate Decarboxylase Length = 425 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|16130742|ref|NP_417315.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. MG1655] gi|89109621|ref|AP_003401.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. W3110] gi|157162291|ref|YP_001459609.1| diaminopimelate decarboxylase [Escherichia coli HS] gi|170018919|ref|YP_001723873.1| diaminopimelate decarboxylase [Escherichia coli ATCC 8739] gi|170082406|ref|YP_001731726.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. DH10B] gi|188494453|ref|ZP_03001723.1| diaminopimelate decarboxylase [Escherichia coli 53638] gi|191166012|ref|ZP_03027848.1| diaminopimelate decarboxylase [Escherichia coli B7A] gi|193071432|ref|ZP_03052346.1| diaminopimelate decarboxylase [Escherichia coli E110019] gi|194439964|ref|ZP_03072024.1| diaminopimelate decarboxylase [Escherichia coli 101-1] gi|209920286|ref|YP_002294370.1| diaminopimelate decarboxylase [Escherichia coli SE11] gi|218555387|ref|YP_002388300.1| diaminopimelate decarboxylase [Escherichia coli IAI1] gi|218696434|ref|YP_002404101.1| diaminopimelate decarboxylase [Escherichia coli 55989] gi|238901974|ref|YP_002927770.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli BW2952] gi|253772307|ref|YP_003035138.1| diaminopimelate decarboxylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037891|ref|ZP_04871949.1| diaminopimelate decarboxylase [Escherichia sp. 1_1_43] gi|254162766|ref|YP_003045874.1| diaminopimelate decarboxylase [Escherichia coli B str. REL606] gi|293449162|ref|ZP_06663583.1| diaminopimelate decarboxylase [Escherichia coli B088] gi|297518158|ref|ZP_06936544.1| diaminopimelate decarboxylase [Escherichia coli OP50] gi|300906633|ref|ZP_07124322.1| diaminopimelate decarboxylase [Escherichia coli MS 84-1] gi|300920304|ref|ZP_07136743.1| diaminopimelate decarboxylase [Escherichia coli MS 115-1] gi|300931304|ref|ZP_07146643.1| diaminopimelate decarboxylase [Escherichia coli MS 187-1] gi|300950577|ref|ZP_07164482.1| diaminopimelate decarboxylase [Escherichia coli MS 116-1] gi|300958158|ref|ZP_07170315.1| diaminopimelate decarboxylase [Escherichia coli MS 175-1] gi|301026182|ref|ZP_07189650.1| diaminopimelate decarboxylase [Escherichia coli MS 196-1] gi|301302976|ref|ZP_07209103.1| diaminopimelate decarboxylase [Escherichia coli MS 124-1] gi|301645193|ref|ZP_07245146.1| diaminopimelate decarboxylase [Escherichia coli MS 146-1] gi|307139522|ref|ZP_07498878.1| diaminopimelate decarboxylase [Escherichia coli H736] gi|307310551|ref|ZP_07590199.1| diaminopimelate decarboxylase [Escherichia coli W] gi|309793887|ref|ZP_07688312.1| diaminopimelate decarboxylase [Escherichia coli MS 145-7] gi|331643524|ref|ZP_08344655.1| diaminopimelate decarboxylase [Escherichia coli H736] gi|331669571|ref|ZP_08370417.1| diaminopimelate decarboxylase [Escherichia coli TA271] gi|118303|sp|P00861|DCDA_ECOLI RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|455170|gb|AAA83861.1| diaminopimelate decarboxylase [Escherichia coli] gi|882731|gb|AAB40485.1| diaminopimelate decarboxylase [Escherichia coli str. K-12 substr. MG1655] gi|1789203|gb|AAC75877.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. MG1655] gi|85675654|dbj|BAE76907.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str. K12 substr. W3110] gi|157067971|gb|ABV07226.1| diaminopimelate decarboxylase [Escherichia coli HS] gi|169753847|gb|ACA76546.1| diaminopimelate decarboxylase [Escherichia coli ATCC 8739] gi|169890241|gb|ACB03948.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. DH10B] gi|188489652|gb|EDU64755.1| diaminopimelate decarboxylase [Escherichia coli 53638] gi|190903960|gb|EDV63673.1| diaminopimelate decarboxylase [Escherichia coli B7A] gi|192955249|gb|EDV85738.1| diaminopimelate decarboxylase [Escherichia coli E110019] gi|194421113|gb|EDX37140.1| diaminopimelate decarboxylase [Escherichia coli 101-1] gi|209913545|dbj|BAG78619.1| diaminopimelate decarboxylase [Escherichia coli SE11] gi|218353166|emb|CAU99032.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli 55989] gi|218362155|emb|CAQ99764.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli IAI1] gi|226839515|gb|EEH71536.1| diaminopimelate decarboxylase [Escherichia sp. 1_1_43] gi|238860758|gb|ACR62756.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli BW2952] gi|242378386|emb|CAQ33164.1| diaminopimelate decarboxylase [Escherichia coli BL21(DE3)] gi|253323351|gb|ACT27953.1| diaminopimelate decarboxylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974667|gb|ACT40338.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli B str. REL606] gi|253978832|gb|ACT44502.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli BL21(DE3)] gi|260448113|gb|ACX38535.1| diaminopimelate decarboxylase [Escherichia coli DH1] gi|291322252|gb|EFE61681.1| diaminopimelate decarboxylase [Escherichia coli B088] gi|299879809|gb|EFI88020.1| diaminopimelate decarboxylase [Escherichia coli MS 196-1] gi|300315180|gb|EFJ64964.1| diaminopimelate decarboxylase [Escherichia coli MS 175-1] gi|300401534|gb|EFJ85072.1| diaminopimelate decarboxylase [Escherichia coli MS 84-1] gi|300412687|gb|EFJ95997.1| diaminopimelate decarboxylase [Escherichia coli MS 115-1] gi|300450105|gb|EFK13725.1| diaminopimelate decarboxylase [Escherichia coli MS 116-1] gi|300460888|gb|EFK24381.1| diaminopimelate decarboxylase [Escherichia coli MS 187-1] gi|300841640|gb|EFK69400.1| diaminopimelate decarboxylase [Escherichia coli MS 124-1] gi|301076463|gb|EFK91269.1| diaminopimelate decarboxylase [Escherichia coli MS 146-1] gi|306909446|gb|EFN39941.1| diaminopimelate decarboxylase [Escherichia coli W] gi|308122294|gb|EFO59556.1| diaminopimelate decarboxylase [Escherichia coli MS 145-7] gi|309703193|emb|CBJ02527.1| diaminopimelate decarboxylase [Escherichia coli ETEC H10407] gi|315062145|gb|ADT76472.1| diaminopimelate decarboxylase, PLP-binding protein [Escherichia coli W] gi|315137442|dbj|BAJ44601.1| diaminopimelate decarboxylase [Escherichia coli DH1] gi|315256700|gb|EFU36668.1| diaminopimelate decarboxylase [Escherichia coli MS 85-1] gi|315615226|gb|EFU95863.1| diaminopimelate decarboxylase [Escherichia coli 3431] gi|323183383|gb|EFZ68780.1| diaminopimelate decarboxylase [Escherichia coli 1357] gi|323377275|gb|ADX49543.1| diaminopimelate decarboxylase [Escherichia coli KO11] gi|323935802|gb|EGB32105.1| diaminopimelate decarboxylase [Escherichia coli E1520] gi|323941552|gb|EGB37733.1| diaminopimelate decarboxylase [Escherichia coli E482] gi|323946526|gb|EGB42550.1| diaminopimelate decarboxylase [Escherichia coli H120] gi|323960718|gb|EGB56341.1| diaminopimelate decarboxylase [Escherichia coli H489] gi|323971632|gb|EGB66862.1| diaminopimelate decarboxylase [Escherichia coli TA007] gi|324016306|gb|EGB85525.1| diaminopimelate decarboxylase [Escherichia coli MS 117-3] gi|324119878|gb|EGC13757.1| diaminopimelate decarboxylase [Escherichia coli E1167] gi|331036995|gb|EGI09219.1| diaminopimelate decarboxylase [Escherichia coli H736] gi|331063239|gb|EGI35152.1| diaminopimelate decarboxylase [Escherichia coli TA271] gi|332344729|gb|AEE58063.1| diaminopimelate decarboxylase LysA [Escherichia coli UMNK88] Length = 420 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|72382497|ref|YP_291852.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. NATL2A] gi|72002347|gb|AAZ58149.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. NATL2A] Length = 454 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 56/395 (14%), Positives = 117/395 (29%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ L T + L A K ++ + ++ G + S Sbjct: 48 GTPLYVLDELSLRTACKTYISSLNKHYPGKSLPLFASKANSSLAICAVISSEGFGLDAVS 107 Query: 60 LYEVMLGHEKFGGET--HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHK 116 E++ E + E++ SN TI+ + + K+ A Sbjct: 108 EGELLTAINGGVKEKDIVFHGNNKSQDELNFAYSNNVTIVLDNYHDIELLKNIASDNKPA 167 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169 K+ LR P + S+ G ++ + N+ GL H + Sbjct: 168 KLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDELKSILEELKTYKWANLTGLHAHIGSQI 227 Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224 + + + ++LGGG+ ++ E K Sbjct: 228 FEVQPHIDLAGVMADALKLAKEIGHPVVDLNLGGGLGIKYVQEDNPPSIEKWVEIISKAV 287 Query: 225 ---------YSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL 273 ++ EPG ++V N+ + + ++ + VD + + Sbjct: 288 VNACRERNLDLPRLMCEPGRSLVANSGLTIYKIGAKKVVPGVRTYLSVDGGMSDNPRPIT 347 Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + + + G+ C +GD+ + + GD ++ YN + Sbjct: 348 YQSLYSACLVDKPMNTNFEKVTIAGKHCESGDVLLKDFLLPSCESGDFLAVFGTGAYNYS 407 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N I P + R D Sbjct: 408 MSSNYNRIPRPATIIVGKGLAELTQRRELPEDLLQ 442 >gi|315608892|ref|ZP_07883865.1| diaminopimelate decarboxylase [Prevotella buccae ATCC 33574] gi|315249419|gb|EFU29435.1| diaminopimelate decarboxylase [Prevotella buccae ATCC 33574] Length = 386 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 66/368 (17%), Positives = 124/368 (33%), Gaps = 28/368 (7%) Query: 4 TPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+Y D + L L + ++ G + A+K A + + + Q G S E Sbjct: 16 TPFYYYDTELLRRTLKSINDEAARHDGFVVHYAVKANANPKVLNVICQAGLGADCVSGGE 75 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + F + K A+ N ++ +L + A + Sbjct: 76 IEAALRAGFPASKTVFAGVGKSDWEINLALDKNIFCFNVESIPELEIINELAARKGTTAR 135 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN- 169 RINP++ ++ G +D E GL FH + Sbjct: 136 VAFRINPNIGAHTHANITTGLAENKFGIALEDMDSVIERAATLEHVAFVGLHFHIGSQIL 195 Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + +++ H ++E +++GGG+ +P + K + + Y+ Sbjct: 196 DMGDFKALCNRINDLQAHLEHRHIRLEHLNVGGGLGIDY-HHPNRVPVPDFKAYFDTYAR 254 Query: 228 QI--------YLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276 + + E G A+V TL T L + + K IVD+ + + L Y Sbjct: 255 HLKLREGQRLHFELGRAVVGQMGTLITRTLYVKQGAAKQFAIVDAGMTDLIRPALYQAYH 314 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + P T V G C + D+F + GD ++ Y + +N Sbjct: 315 KIENLSSQEPPETYDVVGPICESSDVFAKAVDLNKAHRGDLMAIRSAGAYGEIMASGYNC 374 Query: 337 INMPTIAV 344 +P + Sbjct: 375 RQLPAGYI 382 >gi|307151051|ref|YP_003886435.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7822] gi|306981279|gb|ADN13160.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7822] Length = 476 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 53/403 (13%), Positives = 114/403 (28%), Gaps = 41/403 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L K +++ A K ++ + + G S Sbjct: 60 GSPLYILDEFTLRTACQQYREAFKKYYPGQSQVIYASKAWSCMAVCAIIASEGLGFDVVS 119 Query: 60 LYEVMLGHE---------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 E+ + + + + + E++ L + TII + +L Sbjct: 120 GGELYTTLQTLEQMGLDQEIATKIYFHGNNKSKSELNFALDSGCTIIVDNWLELETLVKL 179 Query: 111 AQKLHKKIGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGL 161 K I + + P + S+ G N GL Sbjct: 180 GGNRSKSIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPHQLEAVLTYVSENPVFNCIGL 239 Query: 162 MFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218 H + + + IE +++GGG+ + + Sbjct: 240 HAHIGSQIFETQPHYDLAAVLVSCMKAALERGLPIEELNIGGGLGIRYTEKDDPPTIEAW 299 Query: 219 -----------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--V 265 + + ++ EPG +++ + TV E + + Sbjct: 300 VKNVATALSEACQAQQIPLPKLMAEPGRSLIGSACVTAYTVGSRKEIPDLRTYIAVDGGM 359 Query: 266 EAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 + I N T + G+ C +GDI + + GD + Sbjct: 360 SDNPRPITYQSLYRAIIANKMSSAATETVTIAGKHCESGDILIKEALLPKTEPGDILVVM 419 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N ++ P + N ++ +Y D Sbjct: 420 GTGAYNYSMASNYNRLSRPAAVLVNEGEANLILQRETYEDVLR 462 >gi|300936236|ref|ZP_07151169.1| diaminopimelate decarboxylase [Escherichia coli MS 21-1] gi|300458561|gb|EFK22054.1| diaminopimelate decarboxylase [Escherichia coli MS 21-1] Length = 420 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEYAPTVETVVAGPLCESGDVFTQQEGGNVETRVLPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|325679598|ref|ZP_08159173.1| putative diaminopimelate decarboxylase [Ruminococcus albus 8] gi|324108628|gb|EGC02869.1| putative diaminopimelate decarboxylase [Ruminococcus albus 8] Length = 422 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 60/391 (15%), Positives = 115/391 (29%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N N G K A+K + L + G SSL Sbjct: 19 PTPFHIYDEKGIRENARNLYKAFSWNKGYKEYFAVKATPNPYILKILQEEGCGVDCSSLT 78 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G+ ++ + I + + + Sbjct: 79 ELMMSECCGFKGDDIMFSSNVTPAEDYLKARELGAYINLDDFTHIEYLDQLCGIPETICC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI------ESEIKNVNGLMFHNNCEN---- 169 R NP +S N ++ G + I + + GL Sbjct: 139 -RYNPGGKFSIATKIMDNPGDAKYGFTHEQIIEGFKVLKEKGAKYFGLHAFLASNTVTNE 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + + ++I+L GG+ + ++ + E K +I Sbjct: 198 YYPKLARILFELAVEIKEKTGVEFKFINLSGGVGIAYEPDKPQNDIFAIGEGVHKAFDEI 257 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G ++ L TTV K VD+ + + Sbjct: 258 LVPAGMGDVAIFTELGRYMLAPYGHLITTVKHFKHTHKEYAGVDACACNLMRPAMYGAYH 317 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F ++ GD + D + + + Sbjct: 318 HITVLGKENAPCDHKYDVTGGLCENNDKFAIDRMLPELEKGDILCIHDTGAHGFSMGYNY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG ++ IR + DY+ Sbjct: 378 NGKLRSAELLLKEDGDVQLIRRAETPADYFA 408 >gi|268317211|ref|YP_003290930.1| aspartate kinase [Rhodothermus marinus DSM 4252] gi|262334745|gb|ACY48542.1| aspartate kinase [Rhodothermus marinus DSM 4252] Length = 878 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 108/361 (29%), Gaps = 24/361 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D+ L L+ + ++ ++ ALK + ++ G S E+ Sbjct: 504 PCYVYDEGTLRGQLEALRRL--SSVDRIFYALKANDHPDVLRVFHEAGLGFECVSAGELE 561 Query: 65 LGHEKFG---GETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 F E + + E + + + L + + ++ + + Sbjct: 562 HVRTLFPELAPERLLFTPNFAPADEYRRGFELGAFVTLDNLHPLEAWPEL--FRNRNVLV 619 Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLC 174 R +P S+ G ++ + + GL H Sbjct: 620 RFDPGRGDGHHRYVRTAGAQSKFGIAPAQAKRLRELADRLGLRIVGLHAHVGSGILLPET 679 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-----SVQI 229 ++ + + + + ++ +GGG+ ++ + ++ ++ ++ Sbjct: 680 WAETALFLAELAETYFPDVRYLDVGGGLGVPERTGAPGLDLEAVEAHLHRFKTAHPRFEL 739 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATI----YPN 284 +LEPG +V L V + E V++ + + + L + Sbjct: 740 WLEPGRFLVAEAGVLLARVTQVKEKGGARYAGVETGMNSLIRPALYGAYHEIVNLTRLDA 799 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 T V G C GD+ G + GD + Y + +N Sbjct: 800 PATQTVDVVGPICETGDVLGHGRRLPDTREGDVLLIAQAGAYGAVMSSHYNRRPPAREVF 859 Query: 345 K 345 Sbjct: 860 L 860 >gi|221065369|ref|ZP_03541474.1| diaminopimelate decarboxylase [Comamonas testosteroni KF-1] gi|220710392|gb|EED65760.1| diaminopimelate decarboxylase [Comamonas testosteroni KF-1] Length = 427 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 51/400 (12%), Positives = 107/400 (26%), Gaps = 45/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + A K + + + + + S E Sbjct: 30 GTPLWVYDAATIRERIAQLK-AFD----TVRFAQKACSNIHILKLMREQGVKVDAVSRGE 84 Query: 63 VMLGHE-----KFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH- 115 V+ FG + D A + + + ++ A Sbjct: 85 VLRALAAGFTPGFGEPADIVFTADVMDEATLATVV--EHKVPVNAGSIDMLHQLAAVSRG 142 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCEN 169 + LRINP + + S+ G + + + GL H Sbjct: 143 HHVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSELEAALQAIKTGGLVLAGLHMHIGSGV 202 Query: 170 KSFLCFSAMLKNIE--KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---- 223 ++ + + IS GGG+ + + Sbjct: 203 DYGHLQEVCGAMVKLVERTKAAGVDLHAISAGGGLSIPYRAGDATIDTDHYHGLWDAARQ 262 Query: 224 ------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQ 276 + + + LEPG +V + L TV N + VD+ + + Sbjct: 263 QAEAIVGHKLGLELEPGRFLVAESGVLLGTVRATKNAGSNHFVLVDTGFNELMRPSMYGS 322 Query: 277 ESATIYPNT-----GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 ++V G C +GD+F + +GD + D Sbjct: 323 YHGMEVLRRDGQSLPAQDSVVAGPLCESGDVFTQGDGGVVLPRSLAGASVGDLLVIHDTG 382 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + + R + + Sbjct: 383 AYGSSMSSNYNTRPLAAEVLVDGAQSQLIRRRQTVEELLA 422 >gi|152996024|ref|YP_001340859.1| diaminopimelate decarboxylase [Marinomonas sp. MWYL1] gi|150836948|gb|ABR70924.1| diaminopimelate decarboxylase [Marinomonas sp. MWYL1] Length = 415 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 56/403 (13%), Positives = 124/403 (30%), Gaps = 49/403 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + + S E Sbjct: 17 GTPAWVYDAATIRHQIRQLRDFDV-----IRFAQKACSNIHVLRLMREEGVMVDAVSAGE 71 Query: 63 VMLGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + ++ + D E ++ D + ++ L++ + A H Sbjct: 72 IERSLVAGYSNSDNPDSIVFTADLIDRETIELVIQHDIPVNIGSMDMLHRIAEVA--PHH 129 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 + +R+NP + + P S+ G +D I+ ++ G+ H + Sbjct: 130 SVWIRVNPGFGHGHSEKTNTGGPNSKHGITLEDLPRAVALIQQYGLDLIGIHMHIGSGSD 189 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224 F S + + + I IS GGG+ + + Sbjct: 190 -FEHLSQACQAMVEIVKLANVDIRAISTGGGLPVPYLSDDEELDAKAFFRLWNDARKEIE 248 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 +SV++ +EPG +V N L V + ++ + VD+ + + Sbjct: 249 SHLGHSVKLEVEPGRYLVGNAGALLAEVHCLKSTAEHNFVLVDAGFNDLIRPSMYGSYHK 308 Query: 280 TIYPNTGPY-----------TAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFE 321 + V G C +GD+F + ++GD + F Sbjct: 309 IEVVHQHSNQQGLESISNALEYAVAGPLCESGDVFTQNGNGVICHQILDNPRVGDLLVFN 368 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 D GY + + +N + + + + +D Sbjct: 369 DAGGYGASMSSNYNSRPLAPEIMIDEGQFRLIRKRQKISDLLA 411 >gi|209760938|gb|ACI78781.1| diaminopimelate decarboxylase [Escherichia coli] gi|320640486|gb|EFX10025.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. G5101] gi|320645732|gb|EFX14717.1| diaminopimelate decarboxylase [Escherichia coli O157:H- str. 493-89] gi|320651032|gb|EFX19472.1| diaminopimelate decarboxylase [Escherichia coli O157:H- str. H 2687] gi|320667122|gb|EFX34085.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. LSU-61] Length = 420 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVEPRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|24114117|ref|NP_708627.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 301] gi|30064179|ref|NP_838350.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 2457T] gi|110806774|ref|YP_690294.1| diaminopimelate decarboxylase [Shigella flexneri 5 str. 8401] gi|24053253|gb|AAN44334.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 301] gi|30042436|gb|AAP18160.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 2457T] gi|110616322|gb|ABF04989.1| diaminopimelate decarboxylase [Shigella flexneri 5 str. 8401] gi|281602194|gb|ADA75178.1| Diaminopimelate decarboxylase [Shigella flexneri 2002017] gi|313647902|gb|EFS12348.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 2457T] gi|332753559|gb|EGJ83939.1| diaminopimelate decarboxylase [Shigella flexneri 4343-70] gi|332753695|gb|EGJ84074.1| diaminopimelate decarboxylase [Shigella flexneri K-671] gi|332754246|gb|EGJ84612.1| diaminopimelate decarboxylase [Shigella flexneri 2747-71] gi|332765793|gb|EGJ96006.1| diaminopimelate decarboxylase [Shigella flexneri 2930-71] gi|333000048|gb|EGK19631.1| diaminopimelate decarboxylase [Shigella flexneri K-218] gi|333015035|gb|EGK34378.1| diaminopimelate decarboxylase [Shigella flexneri K-304] Length = 420 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFEV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDTLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|167761920|ref|ZP_02434047.1| hypothetical protein BACSTE_00263 [Bacteroides stercoris ATCC 43183] gi|167700152|gb|EDS16731.1| hypothetical protein BACSTE_00263 [Bacteroides stercoris ATCC 43183] Length = 386 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 122/365 (33%), Gaps = 26/365 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + + A+K A + + + G S Sbjct: 13 LRTPFYYYDTKVLRDTLSCIRTEALRYDNYSVHYAVKANANPKVLTIIRESGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + + K + N ++ +L + A + Sbjct: 73 GEIRAAIKAGFPADKIVFAGVGKADWEINLGLDYNIFCFNVESIPELEIINELAAAKGKV 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNNCE 168 + RINP+V ++ G +D E+KNV GL FH + Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMEDMDHVIDVAQEMKNVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 F+ + + + +IE +++GGG+ K + + Sbjct: 193 ILDMGDFVALCNRVNELLDKLEARQIRIEHVNVGGGLGIDYGHPNRQPVPDFKSYFETYD 252 Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 + + ++ E G ++V +L VL + + + D+ + + L Sbjct: 253 NCLKLRSYQTLHFELGRSVVGQCGSLIAKVLYVKQGTNKQFAILDAGMTDLIRPALYQAF 312 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + T V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKIENITSDAPQQTYDVVGPICESSDVFGKAVDLNGVKRGDLIALRSAGAYGEIMASGYN 372 Query: 336 GINMP 340 +P Sbjct: 373 CRELP 377 >gi|254424507|ref|ZP_05038225.1| diaminopimelate decarboxylase [Synechococcus sp. PCC 7335] gi|196191996|gb|EDX86960.1| diaminopimelate decarboxylase [Synechococcus sp. PCC 7335] Length = 472 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 54/395 (13%), Positives = 110/395 (27%), Gaps = 35/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+Q L + ++ A K + + Q S Sbjct: 63 GSPLYILDEQTLRTACRQYKQSFEEHYPGESLIVYASKAWNCLAVCAIALQEGIAIDVVS 122 Query: 60 LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ G + + E+ L I+ + +L + A+ Sbjct: 123 GGEISTAIAAGATGKMLYFHGNNKSIEELQLGLDADARIVVDNWHELKTLEQIAKDARTT 182 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNC 167 + + P + S+ G E +E N GL H Sbjct: 183 ATILVRLTPGIECHTHEYIQTGHIDSKFGFDPDQLEEVFEFIANKTEHINCIGLHAHIGS 242 Query: 168 ENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-KEFSE 223 + + + + F + IE I +GGG+ + K E Sbjct: 243 QIFELQPHRDLANVMMRWFQSARQYGLSIEEIDIGGGLGIRYTESDDPPSIDEWAKTVCE 302 Query: 224 KYSVQI----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + EPG +++ + TV V + + Sbjct: 303 SMTAACTASGLPYPKLLCEPGRSLIGSACVTAYTVGGQKCVPGIRSYVSVDGGMSDNPRP 362 Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + T + G+ C +GD+ + ++ G+ + YN Sbjct: 363 ITYQSVYRVLAASKMSAPLSETVTLAGKHCESGDVVIHSAYLPTLESGEVLVIPATGAYN 422 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + + +N + P + N +R +Y D Sbjct: 423 YSMSSNYNRVPRPAAVLVNQGKADLILRRETYADL 457 >gi|225570699|ref|ZP_03779722.1| hypothetical protein CLOHYLEM_06799 [Clostridium hylemonae DSM 15053] gi|225160526|gb|EEG73145.1| hypothetical protein CLOHYLEM_06799 [Clostridium hylemonae DSM 15053] Length = 425 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 123/391 (31%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N+ N G K A+K + D L +Y G SS Sbjct: 20 PTPFHLYDEKGIRRNMQALRDAFSWNKGYKEYFAVKATPNPYLIDILREYGCGCDCSSYT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML G+ ++ E I + ++ + ++ + K I Sbjct: 80 ELMLSEAVGATGDDIMFSSNDTPAEEFIYAEKLGAIINLDDITHIEFLEETIGYIPKTIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N S+ G + ++S+ G+ Sbjct: 140 CRYNPGGLFKISNDIMDNPGDSKYGMTTEQLFEAFKILKSKGAEEFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + + I++I+L GGI + + + + + + Sbjct: 200 YYPMLAKILFEEAVRLQKETGVHIKFINLSGGIGIPYTPDQEPNDIRIIGDGVRRVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + K + VD+ + + Sbjct: 260 LVPAGMGDVEIYTELGRFMLGPYGCLVTEAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F V++GD + D + + + Sbjct: 320 HVTVMGREDCPCDHKYDVVGSLCENNDKFAIDRMLPKVEMGDILVIHDTGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+ + IR + DY+ Sbjct: 380 NGKLKSAELLLKEDGSAQLIRRAETPADYFA 410 >gi|37525159|ref|NP_928503.1| diaminopimelate decarboxylase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784585|emb|CAE13485.1| diaminopimelate decarboxylase (DAP decarboxylase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 436 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 61/400 (15%), Positives = 120/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + ++ ++ + A K + + + +Y + SL E Sbjct: 35 GTPLWVYDSETIIQKINLLCQFDV-----VRFAQKACSNTHILRLMREYGVKVDAVSLGE 89 Query: 63 VMLG-HEKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + F + D ++ D + ++ L + K Sbjct: 90 IERALRAGFCPGQEVSDIIFTADLIDVSTLQRVTELDIPVNAGSIDMLEQIGQ--YKKGH 147 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENK 170 + LRINP + + S+ G +KI + GL H Sbjct: 148 PVWLRINPGFGHGHSQKTNTGGENSKHGIWYQNLPQAIEKIRHYGLKLLGLHMHIGSGVD 207 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224 S +E+ I+ IS GGG+ + + Sbjct: 208 YHHLASVCNAMVEQVI-LCGEDIQAISAGGGLSTPYHQGDERINIAHYFGLWDDARKRIE 266 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279 + +++ +EPG +V + L T V + +N V+VD+ + + Sbjct: 267 QHLGHKIELEIEPGRFLVAESGVLMTEVRAVKQMGNRNYVLVDAGFNDLMRPVMYGSYHH 326 Query: 280 TIYPNTGPYTAM--------VCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 V G C +GDIF + PV++GD + F D Sbjct: 327 ISVLPADGRKIEQLPLRETLVAGPLCESGDIFTQVEGGGIAPRALPPVQVGDYLVFHDTG 386 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 387 AYGASMSSNYNSRPLISEVLFVNGKPQLIRRRQTIEELLA 426 >gi|191173213|ref|ZP_03034744.1| diaminopimelate decarboxylase [Escherichia coli F11] gi|300995825|ref|ZP_07181257.1| diaminopimelate decarboxylase [Escherichia coli MS 200-1] gi|190906464|gb|EDV66072.1| diaminopimelate decarboxylase [Escherichia coli F11] gi|300304680|gb|EFJ59200.1| diaminopimelate decarboxylase [Escherichia coli MS 200-1] gi|324011693|gb|EGB80912.1| diaminopimelate decarboxylase [Escherichia coli MS 60-1] Length = 420 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + L ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--LGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|134105016|pdb|2O0T|A Chain A, The Three Dimensional Structure Of Diaminopimelate Decarboxylase From Mycobacterium Tuberculosis Reveals A Tetrameric Enzyme Organisation gi|134105017|pdb|2O0T|B Chain B, The Three Dimensional Structure Of Diaminopimelate Decarboxylase From Mycobacterium Tuberculosis Reveals A Tetrameric Enzyme Organisation gi|134105018|pdb|2O0T|C Chain C, The Three Dimensional Structure Of Diaminopimelate Decarboxylase From Mycobacterium Tuberculosis Reveals A Tetrameric Enzyme Organisation gi|134105019|pdb|2O0T|D Chain D, The Three Dimensional Structure Of Diaminopimelate Decarboxylase From Mycobacterium Tuberculosis Reveals A Tetrameric Enzyme Organisation Length = 467 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 52/406 (12%), Positives = 122/406 (30%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + +G + A F + +++ + E Sbjct: 41 GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAXAFLCSEVARWISEEGLCLDVCTGGE 99 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + K AV + I+ ++++++ + A + + Sbjct: 100 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 159 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ + GL H + Sbjct: 160 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 219 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + G F + I + LGGG+ + L Sbjct: 220 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 279 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + ++ +EPG AI T V + + + Sbjct: 280 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 339 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L + + + P A + G+ C +GDI + ++ GD + Sbjct: 340 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 399 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + + +R + +D + Sbjct: 400 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 445 >gi|160942087|ref|ZP_02089402.1| hypothetical protein CLOBOL_06975 [Clostridium bolteae ATCC BAA-613] gi|158434978|gb|EDP12745.1| hypothetical protein CLOBOL_06975 [Clostridium bolteae ATCC BAA-613] Length = 422 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 118/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+YL D++ + N N G K A+K + + L GT SS+ Sbjct: 20 PTPFYLYDEKGIRENAARLKQAFSWNRGYKEYFAVKATPNPFLLNILKDMGCGTDCSSMT 79 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G ++ E I + ++ + ++ + + I Sbjct: 80 ELMMSRACGFSGSDIMFSSNDTPPEEFAYAEKLGAIINLDDITHIQCLEETLGHIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK---------IESEIKNVN-GLMFHNNCEN 169 R NP + N S+ G + ++ ++ L + Sbjct: 140 CRFNPGGLFKISNDIMDNPGDSKYGMTAEQIGQAFKILKEKGAKHFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + K I +I+L GGI + + + + + +I Sbjct: 200 YYPMLAKILFELAVKLKEETGVHIAFINLSGGIGIPYRPDQEPNDILAIGDGVRRVYEEI 259 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E G ++ L T + K V VD+ + + Sbjct: 260 LVPAGMDDVALCTELGRFMMGPYGALVTKAIHEKHTYKEYVGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F +K GD + D + + Sbjct: 320 HITVMGREDEPCTRMYDVVGSLCENNDKFAIDRMLPEIKKGDLLFIHDAGAHGFAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DGT++ IR + DY+ Sbjct: 380 NGKLKSAELLLKEDGTVEMIRRAETPEDYFA 410 >gi|332359129|gb|EGJ36950.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK49] Length = 416 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 118/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKVISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169 V + D ++ G I++ + G+ Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKEFGAEKFGIHAFLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P + V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRPESETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409 >gi|323188745|gb|EFZ74030.1| diaminopimelate decarboxylase [Escherichia coli RN587/1] Length = 420 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNSQARLIRRRQTI 411 >gi|134301797|ref|YP_001121765.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis WY96-3418] gi|134049574|gb|ABO46645.1| Diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis WY96-3418] Length = 394 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 62/372 (16%), Positives = 119/372 (31%), Gaps = 30/372 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D + L + A ++ A+K + +Y G S Sbjct: 23 TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 82 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117 E+ E K + + K + + D FN+ S AQ+ +K+ Sbjct: 83 EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 142 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168 I LR+NP++ + + G + + N+ GL +H + Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVNILNWLKDEYRNFANINIIGLHYHVGSQ 202 Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 ++ F K I+ I+ GGG+ + R + Sbjct: 203 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262 Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277 EF E ++ E G ++V + L + VL + VI+D+ + + L + Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 322 Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G C + D+F +++ +K GD ++ Y + Sbjct: 323 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 382 Query: 334 FNGINMPTIAVK 345 +N Sbjct: 383 YNLRPSVQEYFI 394 >gi|104782627|ref|YP_609125.1| diaminopimelate decarboxylase [Pseudomonas entomophila L48] gi|95111614|emb|CAK16335.1| diaminopimelate decarboxylase [Pseudomonas entomophila L48] Length = 409 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 58/396 (14%), Positives = 119/396 (30%), Gaps = 39/396 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P + D Q + +D L + A K + + + + SL E Sbjct: 14 GSPLWAYDAQTIHQRIDQLLQHFD----TVRFAQKANPNLHVLRLMRERGLVLDAVSLGE 69 Query: 63 VMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKI 118 + GE + + + DT I ++ + + ++ Sbjct: 70 MERAFAAGAAVDGEPAGVVLTCDVLDQPTLARVVDTKIEVNAGSIDMLRQLGERSPGHRV 129 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSF 172 LRINP + + S+ G + E+ ++ G+ H + Sbjct: 130 WLRINPGFGHGHSRKTNTGGENSKHGIWHEQLPEALACVKQFGLHLVGVHMHIGSGVD-Y 188 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----------CQRLKEFS 222 + + G IE S+GGG+ + + E Sbjct: 189 QHLEQVAGAMVGLIGKLGMDIEAFSIGGGLSTPYRSDDQPVDLQRYARTWAVARAEIETM 248 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 +SV++ +EPG +V + L V + K+ ++VD+ + + Sbjct: 249 LGHSVRMEIEPGRYLVAESGYLVAEVRAVKQMGDKHYILVDAGFNDLMRPAMYGAYHRMS 308 Query: 282 YPNTGPYTA-------MVCGRSCLAGDIFGEFHF------EKPVKIGDRISFEDVAGYNI 328 + +V G C +GD+F + K+GD + D Y Sbjct: 309 LFDAVGRPVSRPLQPTVVAGPLCESGDVFTQNDEELTPQDLPQAKVGDLLVIHDAGAYGA 368 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + D R + + Sbjct: 369 SMSSNYNSRPLLPEFLIENDSLRMIRRRQTVQELLA 404 >gi|291561245|emb|CBL40044.1| Diaminopimelate decarboxylase [butyrate-producing bacterium SS3/4] Length = 424 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 60/391 (15%), Positives = 117/391 (29%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+YL D++ + N N G + A+K + L + GT SS Sbjct: 20 PTPFYLYDEKGIRENALKLKEAFSWNKGFREYFAVKATPNPFILKILQELGCGTDCSSKT 79 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ F G ++ E I + + + + + + I Sbjct: 80 ELLMSDACGFSGHDIMFSSNDTPPEEFKLAYDLGAIINLDDFTHIECLEKTIGTIPETIC 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVN-GLMFHNNCEN 169 R NP + N ++ G ++ ++ L + Sbjct: 140 CRFNPGGLFKVATDIMDNPGDAKYGMTEAQITEAYKILKAKGAKNFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + K I++I+L GGI + + + + E K + Sbjct: 200 YYPILAKILFELAVKLKKETGADIKFINLSGGIGIPYRPDQEPNDIKVIGESVRKVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T + K + VD+ + + Sbjct: 260 LVPAGMGDVAIFTELGRFMLAPYGALVTRAIHEKHTYKEYIGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + GD + D + + Sbjct: 320 HITVMGKENEPCDHKYDVTGSLCENNDKFAIDRMLPKIDKGDLLFIHDAGAHGFAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR + DY+ Sbjct: 380 NGKLKSAELLLKEDGSVQMIRRAETPKDYFA 410 >gi|38233630|ref|NP_939397.1| diaminopimelate decarboxylase [Corynebacterium diphtheriae NCTC 13129] gi|38199890|emb|CAE49556.1| diaminopimelate decarboxylase [Corynebacterium diphtheriae] Length = 442 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 53/402 (13%), Positives = 117/402 (29%), Gaps = 41/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + A K+ A K F + + + +S E Sbjct: 38 GTPVFVVDEADFRSRCRDMAAAFGGAD-KVHYASKAFLTRRIARWVEEEGLSLDIASHGE 96 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F + + KD V + ++ +++ +L + ++ A + Sbjct: 97 LQVALRAGFPSQRITAHGNNKDRAFLQALVDARVGHVVIDSMVELERLEEIAGAAGIQQP 156 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---------VNGLMFHNNCE 168 + +R+ P + + + G + GL H + Sbjct: 157 VMVRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAYAAAARAISSESLYLIGLHCHVGSQ 216 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +L + +E + LGGG + + + K Sbjct: 217 VFDAQGFSLAAQRVLDLYSRIHRELGVDLEQLDLGGGYGIAYTEDETPLDVAAVAQDLLK 276 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267 + +I +EPG AI +T V + + + Sbjct: 277 AVQSAADEIGISAPEILVEPGRAIAGPSTVTVYEVGTVKDVHVTDRQTRRYLAVDGGMSD 336 Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFED 322 ++ L E P ++ V G C +GDI ++ GD ++ Sbjct: 337 NIRPALYEAEYDARVINRNITGTPISSRVVGSHCESGDILINDAMLPDDIREGDLLALAA 396 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N + P + ++ + +D Sbjct: 397 TGAYCFAMSSRYNMMGRPAVVSVLDGQASVMVKRENIDDLLQ 438 >gi|329955689|ref|ZP_08296597.1| diaminopimelate decarboxylase [Bacteroides clarus YIT 12056] gi|328526092|gb|EGF53116.1| diaminopimelate decarboxylase [Bacteroides clarus YIT 12056] Length = 386 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 123/365 (33%), Gaps = 26/365 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + + A+K A + + + G S Sbjct: 13 LRTPFYYYDTKVLRDTLACIRTEASRYENYSVHYAVKANANPKVLTIIRESGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + + K + + D FN +V +L + A + Sbjct: 73 GEIRAAIKAGFPADKIVFAGVGKADWEINLGLDYDIFCFNVESVPELEIINELAAAKGKT 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNNCE 168 + RINP+V ++ G +D E++NV GL FH + Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMEDMDHVIDVAQEMQNVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218 F+ + + + +I +++GGG+ + F Sbjct: 193 ILDMGDFVALCNRVNELLDKLEARRIRIGHVNVGGGLGIDYGHPDRQPVPDFKSYFETYD 252 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 + ++ E G ++V +L + VL + + + D+ + + L Sbjct: 253 NCLKLRPYQTLHFELGRSVVGQCGSLISKVLYVKQGANKQFAILDAGMTDLIRPALYQAF 312 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + T V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKIENVTSDAPQQTYDVVGPICESSDVFGKAVDLNGVKRGDLIALRSAGAYGEIMASGYN 372 Query: 336 GINMP 340 +P Sbjct: 373 CRELP 377 >gi|323345490|ref|ZP_08085713.1| diaminopimelate decarboxylase [Prevotella oralis ATCC 33269] gi|323093604|gb|EFZ36182.1| diaminopimelate decarboxylase [Prevotella oralis ATCC 33269] Length = 385 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 73/369 (19%), Positives = 130/369 (35%), Gaps = 26/369 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 IKTP+Y D L L+ + K K+ A+K A + + + Q G S Sbjct: 13 IKTPFYYYDTDILRETLNVIHKEVDKYENYKVHYAIKANANPKILNIICQSGFGADCVSG 72 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116 E+ F Y K + + D FN ++ +L + A+K K Sbjct: 73 GEINAAISTGFPTSKIVYAGVGKSDWEINLGLDKDIFCFNVESLEELEVINELAEKKDKT 132 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 KI LRINP V + ++ G D + + GL FH + Sbjct: 133 AKIALRINPDVGAHTHVNIKTGLAENKFGISIIDMENVITQAASMKNIKIIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLK 219 F+ + ++++ ++ I++GGG+ + + Sbjct: 193 ILDMGDFIALCNRINDLQEHLERNRFLVKHINVGGGLGINYEHPNREPIPDFHSYFNAYH 252 Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--Y 275 + + ++ E G ++V +L T VL + + K VIVD+ + + L Y Sbjct: 253 RHLKLRDGQILHFELGRSVVGQCGSLITRVLYVKQGTHKQFVIVDAGMTDLIRPALYQAY 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + I + T V G C + D+F + GD I+ Y + +N Sbjct: 313 HKIENISSDEKMRTYDVVGPICESSDVFAKSIDLNTTHRGDLIAIRSAGAYGEIMASQYN 372 Query: 336 GINMPTIAV 344 +P + Sbjct: 373 CRKLPKGYI 381 >gi|124022700|ref|YP_001017007.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9303] gi|123962986|gb|ABM77742.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9303] Length = 455 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 50/396 (12%), Positives = 107/396 (27%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ L + + + A K ++ M + G S Sbjct: 48 GTPLYVLDEATLRAACQSYRGALQRHYPGPSLPIYASKANSSLMMSSLVASEGFGLDVVS 107 Query: 60 LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + G+ + D E+ N TI+ + L++ Sbjct: 108 AGELLTALKGGVPGDCIVLHGNNKSDQELLLAYRNGVTIVADNQHDLDRLSQLVPVGADP 167 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168 L + P + S+ G + + GL H + Sbjct: 168 ANLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLESVLNQLLGCRWARLTGLHAHIGSQ 227 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + + + +++GGG+ + + Sbjct: 228 IFELEPHQDLADVMAGALQLARRLGHPVMDLNVGGGLGVRYVSSDDPPSIDNWVKVVAEA 287 Query: 226 SVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272 Q + EPG ++V V + + VD + + Sbjct: 288 VNQACRSRNLDLPRLMCEPGRSLVAAAGVTLYRVGSRKTIPGLRTYLSVDGGMSDNPRPI 347 Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 A ++ T + G+ C +GD+ + G+ + YN+ Sbjct: 348 TYQSLYTACLADRPLDSPDETITLVGKHCESGDVLLKDLALPYASSGEVLVVFATGAYNV 407 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + + + R D Sbjct: 408 SMSSNYNRIPRPAAVLVHSGHSELVQRREQPEDLLR 443 >gi|296119501|ref|ZP_06838059.1| diaminopimelate decarboxylase [Corynebacterium ammoniagenes DSM 20306] gi|295967384|gb|EFG80651.1| diaminopimelate decarboxylase [Corynebacterium ammoniagenes DSM 20306] Length = 445 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 58/404 (14%), Positives = 116/404 (28%), Gaps = 43/404 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP + D+ + ++ A K F + + +N+ +SL E Sbjct: 39 GTPVMVFDEDDFRSRCRDLAEAFGGPE-RVHYASKAFLSKRIARWVNEEGLALDVASLGE 97 Query: 63 VMLGHEK-FGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + + F E + K + ++ ++ +L A K Sbjct: 98 LQIALAADFPAERMTVHGNNKSAKFLQACVDAKVGHVVIDSAQELELLDLIAAKAQHVQP 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEIKNVN-------GLMFHNNCE 168 + +R+ P V + + G + E+ + GL H + Sbjct: 158 VLIRVTPGVDAHTHEFIATSHEDQKFGISLATGEAFEAVKACLRAENLTLVGLHCHVGSQ 217 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------ 218 F ++ + ++ I LGGG + + + Sbjct: 218 VFDAEGFKLAAERIMGLYSQIHDELGYTLKEIDLGGGYGIPYTAHESALDIKAVSQDLLT 277 Query: 219 -----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265 + + +EPG A+V V I + + V VD + Sbjct: 278 AVANTADELGIEPPVVLVEPGRALVGAAAVTVYEVGVIKDVTTGDSATPQRRYVAVDGGM 337 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320 ++ L E Y + + V G C +GDI + VK GD ++ Sbjct: 338 SDNIRPALYGAEYDARIINRYTDGEEIPSRVVGSHCESGDILIDNIDLPNDVKAGDFLAT 397 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y+ + +N P + +R + D + Sbjct: 398 PATGAYSYAMGSRYNAALRPAVVAVRAGAIKPMLRRETLEDLLS 441 >gi|148548869|ref|YP_001268971.1| diaminopimelate decarboxylase [Pseudomonas putida F1] gi|148512927|gb|ABQ79787.1| diaminopimelate decarboxylase [Pseudomonas putida F1] Length = 410 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 49/398 (12%), Positives = 127/398 (31%), Gaps = 44/398 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P + D + ++ + + A K + + + + SL E Sbjct: 16 GSPLWAYDASTIAERVEQL-NVFD----TVRFAQKANPNLHVLRLMRAHGLVLDAVSLGE 70 Query: 63 VMLGHE------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + A ++ V+++ + ++ L + +++ Sbjct: 71 MERAFAAGASVDGDPAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLRQLGERS--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 ++ +RINP + + S+ G ++ I++ ++ G+ H Sbjct: 129 RVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHGLHLVGVHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224 + + +++ + IE S+GGG+ K ++ + Q ++ Sbjct: 189 -YQHLEQVARSMIELIDRLGVDIEAFSIGGGLSTPYRSTDKPVDLQRYAQTWAVARKEIE 247 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA 279 + V++ +EPG +V + L V + + V++D+ + + Sbjct: 248 AMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVMIDAGFNDLMRPAMYGAYHG 307 Query: 280 TIY-------PNTGPYTAMVCGRSCLAGDIFGEF------HFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F + ++GD + D Y Sbjct: 308 MTLLDADGQAVDRPRQPTVVAGPLCESGDVFTQDDQALTPQDLPQAQVGDLLVIHDAGAY 367 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + D + Sbjct: 368 GASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLS 405 >gi|193063580|ref|ZP_03044669.1| diaminopimelate decarboxylase [Escherichia coli E22] gi|194426152|ref|ZP_03058707.1| diaminopimelate decarboxylase [Escherichia coli B171] gi|260845501|ref|YP_003223279.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O103:H2 str. 12009] gi|192930857|gb|EDV83462.1| diaminopimelate decarboxylase [Escherichia coli E22] gi|194415460|gb|EDX31727.1| diaminopimelate decarboxylase [Escherichia coli B171] gi|257760648|dbj|BAI32145.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O103:H2 str. 12009] gi|320202479|gb|EFW77049.1| Diaminopimelate decarboxylase [Escherichia coli EC4100B] Length = 420 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGLVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|304407007|ref|ZP_07388661.1| diaminopimelate decarboxylase [Paenibacillus curdlanolyticus YK9] gi|304343994|gb|EFM09834.1| diaminopimelate decarboxylase [Paenibacillus curdlanolyticus YK9] Length = 443 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + + + G ++ A K F+ M Q S Sbjct: 32 GTPLYIVDEAFVRQRAREFVEAFRATGLKFQVAYASKAFSVMAMCAIAEQENLSLDVVSD 91 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F E ++ K E A+ + + + +++ A + Sbjct: 92 GELYTALQAGFPVERIHFHGNNKTPEEINMAIDAGIGCFVVDNFVEMSLLNALAADKGKT 151 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G ++ ++ N+ G+ H Sbjct: 152 VNVLLRITPGVEAHTHDFISTGQQDSKFGFDLGNGTAFRAIEETLKLGNLNLLGVHSHIG 211 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214 + F + + K I++GGG + Sbjct: 212 SQIFEVDGFGMAVDKVAKFAVKVRDELGKTFSVINVGGGFGIRYVEGDSPLPLSTYVNAI 271 Query: 215 CQRLKEFS---EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + +I++EPG ++V + T T+ E + + + Sbjct: 272 ADAIISNFTAANYPTPEIWIEPGRSMVGDAGTTLYTIGTHKEIPGVRKYIAVDGGMTDNP 331 Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + N T V G++C +GD+ + GD ++ Sbjct: 332 RPALYGSKYEAVLANRANAANEETVTVAGKACESGDMLIWDLELPKSESGDLLAVFCTGA 391 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + +N I P + ++ + D N Sbjct: 392 YNYAMASNYNRIRRPAVVFVKDGEASLVVKRETLEDIVVN 431 >gi|311898369|dbj|BAJ30777.1| putative diaminopimelate decarboxylase [Kitasatospora setae KM-6054] Length = 463 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 68/398 (17%), Positives = 123/398 (30%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ A AG + A K F + + L++ S E Sbjct: 63 GTPAYVMDEAD-FRARARAWRDAFGAGADVYYAGKAFLSKAVVRWLHEEGLNVDVCSSGE 121 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + GE A + K AV + I+ ++ ++ + A Q + + Sbjct: 122 LHVALAAGMPGERIALHGNNKSVGELEQAVKAGVGHIVVDSFQEIERLAAIADAQGVRQP 181 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +RI V + G E + + + G+ H + Sbjct: 182 VLIRITVGVEAHTHEFIATAHEDQKFGLSLSGGLAAEAVRRVLARPSLELRGIHSHIGSQ 241 Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F F + + ++ I LGGG+ + Sbjct: 242 IFDFAGFEVAARRVVGLLAEVRDEHGVELPEIDLGGGLGIAYTAEDDPREPAEIAASLTD 301 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHVPD 271 +I +EPG AIV T V + E ++ V VD + ++ Sbjct: 302 IVRRECAAAELTPPRISVEPGRAIVGPTAFTLYEVGTVKALEGLRTYVSVDGGMSDNIRT 361 Query: 272 YLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 L E + + P A V G+ C +GDI + F + GD I+ Y Sbjct: 362 ALYDAEYSVALVSRTSAAEPMLARVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P + +R + D Sbjct: 422 CRSMASNYNHALKPPVLAVADGAARVIVRRETEEDLLR 459 >gi|323966820|gb|EGB62251.1| diaminopimelate decarboxylase [Escherichia coli M863] gi|327251586|gb|EGE63272.1| diaminopimelate decarboxylase [Escherichia coli STEC_7v] Length = 420 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 56/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGH-EKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + + D +S + +V L++ + ++ Sbjct: 82 RALVAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G + I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALELIQRHHLQLVGVHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALASDGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|323172859|gb|EFZ58490.1| diaminopimelate decarboxylase [Escherichia coli LT-68] Length = 420 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RASAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LDHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|183596304|ref|ZP_02958332.1| hypothetical protein PROSTU_00039 [Providencia stuartii ATCC 25827] gi|188023908|gb|EDU61948.1| hypothetical protein PROSTU_00039 [Providencia stuartii ATCC 25827] Length = 419 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 124/400 (31%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D ++ ++ + A K + + + + S SL E Sbjct: 25 GTPVWVYDSSVIIERINQLK-----PFDTVRFAQKACSNIHILRLMREQGVKVDSVSLGE 79 Query: 63 VMLGH-----EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + + D A ++ D + ++ L++ + QK Sbjct: 80 IERALVAGFQAGRENSEIVFTADVLDRATLARVTELDIPVNAGSIDMLSQIGE--QKSGH 137 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 + LRINP + + S+ G +D I ++ GL H Sbjct: 138 PVWLRINPGFGHGHSQKTNTGGENSKHGIWYQDLPKALEQIRRYNLSLVGLHMHIGSGVD 197 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-------KEFSE 223 + + + + ++ I+ IS GGG+ ++ Q ++ E Sbjct: 198 -YQHLANVCDAMVEQVISSNADIQAISAGGGLSTPYREQDEVIDIQHYYSLWNTARQRIE 256 Query: 224 KYSVQIY---LEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279 ++ +EPG +V + L V + ++ V+VDS + + Sbjct: 257 RHLGHSIELEIEPGRYLVAESGVLLAEVRAVKTMGSRHYVLVDSGFNDLMRPAMYGSYHH 316 Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVA 324 +V G C +GD+F E V++GD + F D Sbjct: 317 ISVLPAEGRSLENVPLKETIVAGPLCESGDVFTQQEGGMVETRLLPDVQVGDYLVFHDTG 376 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + R + + Sbjct: 377 AYGASMSSNYNSRPLLPEVLLIEGTPKLIRRRQTIEELLA 416 >gi|324993658|gb|EGC25577.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK405] gi|324995030|gb|EGC26943.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK678] gi|327474531|gb|EGF19936.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK408] Length = 416 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 117/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169 V + D ++ G I++ + G+ Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHAFLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTNVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409 >gi|125718586|ref|YP_001035719.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK36] gi|125498503|gb|ABN45169.1| Diaminopimelate decarboxylase, putative [Streptococcus sanguinis SK36] Length = 416 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 117/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEEGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFVGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169 V + D ++ G I++ + G+ Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHAFLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRPMGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409 >gi|325274551|ref|ZP_08140611.1| diaminopimelate decarboxylase [Pseudomonas sp. TJI-51] gi|324100310|gb|EGB98096.1| diaminopimelate decarboxylase [Pseudomonas sp. TJI-51] Length = 410 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 124/398 (31%), Gaps = 44/398 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P + D + ++ + + A K + + + + SL E Sbjct: 16 GSPLWAYDTGTIAERVEQLK-VFD----TVRFAQKANPNLHVLRLMRGHGLVLDAVSLGE 70 Query: 63 VMLGHE------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + A ++ V++ + ++ L + +++ Sbjct: 71 MERAFAAGASVQGDPAGVVLTCDALDRPTLERVVAEKIEVNAGSIDMLRQLGERS--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 ++ +RINP + + S+ G + I++ ++ G+ H Sbjct: 129 RVWVRINPGFGHGHSRKTNTGGENSKHGIWHEQLDEALGVIKAHGLHLVGVHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224 + + +++ + G IE S+GGG+ K ++ + Q ++ Sbjct: 189 -YQHLEQVARSMIELVGRLGVDIEAFSIGGGLSTPYRSSDKPVDLQRYAQTWAVARKEIE 247 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA 279 + V++ +EPG +V L V + + V++D+ + + Sbjct: 248 AMLGHPVRMEIEPGRFLVAECGYLVAEVRAVKQVGRNTFVMIDAGFNDLMRPAMYGAYHG 307 Query: 280 TIYPNTGPYTAM-------VCGRSCLAGDIFGEF------HFEKPVKIGDRISFEDVAGY 326 + V G C +GD+F + ++GD + D Y Sbjct: 308 MTLLDANGQPVERPRQPTVVAGPLCESGDVFTQDDQELTPQDLPQAQVGDLLVIHDAGAY 367 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + D + Sbjct: 368 GASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLD 405 >gi|322387089|ref|ZP_08060700.1| diaminopimelate decarboxylase [Streptococcus infantis ATCC 700779] gi|321142076|gb|EFX37570.1| diaminopimelate decarboxylase [Streptococcus infantis ATCC 700779] Length = 417 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 115/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNEAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLGHE-KF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G E + D E TI + ++ + A Sbjct: 79 ELLMSHKLGFTGAEMMFSSNNTPDQEYAYARELGATINLDAFEDIDHLECAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G + E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKEQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E + + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRRVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGILVTKVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 ATIYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 V G C D F +IGD + D + + +N Sbjct: 318 HITNMMNPGGQTEVVDVVGSLCENNDKFAVNRELPQTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + DG + IR DY+ L Sbjct: 378 AKLRSAEILYTEDGGARLIRRAERPEDYFATL 409 >gi|288926151|ref|ZP_06420078.1| diaminopimelate decarboxylase [Prevotella buccae D17] gi|288337043|gb|EFC75402.1| diaminopimelate decarboxylase [Prevotella buccae D17] Length = 386 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 67/368 (18%), Positives = 126/368 (34%), Gaps = 28/368 (7%) Query: 4 TPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+Y D + L L + ++ G + A+K A + + + Q G S E Sbjct: 16 TPFYYYDTELLRRTLKSINDEAARHDGFVVHYAVKANANPKVLNVICQAGLGADCVSGGE 75 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKKIG 119 + F + K + + D FN ++ +L + A + Sbjct: 76 IEAALRAGFPAAKTVFAGVGKSDWEINLALDKDIFCFNVESIPELEIINELAARKGTTAR 135 Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN- 169 RINP++ ++ G +D E GL FH + Sbjct: 136 VAFRINPNIGAHTHANITTGLAENKFGIALEDMDSVIERAATLEHVAFVGLHFHIGSQIL 195 Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F + +++ H ++E +++GGG+ +P + K + + Y+ Sbjct: 196 DMGDFKALCNRINDLQAHLEHRHIRLEHLNVGGGLGIDY-HHPNRVPVPDFKAYFDTYAR 254 Query: 228 QI--------YLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276 + + E G A+V TL T L + + K IVD+ + + L Y Sbjct: 255 HLKLREGQRLHFELGRAVVGQMGTLITRTLYVKQGAAKQFAIVDAGMTDLIRPALYQAYH 314 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + P T V G C + D+F + GD ++ Y + +N Sbjct: 315 KIENLSSQEPPETYDVVGPICESSDVFAKAVDLNKAHRGDLMAIRSAGAYGEIMASGYNC 374 Query: 337 INMPTIAV 344 +P + Sbjct: 375 RQLPAGYI 382 >gi|70729686|ref|YP_259425.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf-5] gi|68343985|gb|AAY91591.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf-5] Length = 410 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 53/396 (13%), Positives = 117/396 (29%), Gaps = 42/396 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP + D + + + A K + + + + + SL E Sbjct: 18 GTPLWCYDAATIQARIAQLQ-AFDV----VRYAQKASSNLHLLRLIREAGVRVDAVSLGE 72 Query: 63 VMLGH-EKFGGET--HAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + F + + + + V+ + ++ L + +K+ ++ Sbjct: 73 IERALLAGFSPVDAGIVFTCDLFDEATLARVVELQVEVNAGSIDMLRQLGEKS--PGHRV 130 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G I ++ GL H + Sbjct: 131 WLRINPGFGHGHSRKTNTGGENSKHGIWHDQMSEALAVIRQHGLHLVGLHMHIGSGVD-Y 189 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK---- 224 + + +E S+GGG+ + V+ + K ++ Sbjct: 190 DHLEQVGAAMVAAVKSLDHDLEAFSIGGGLSTPYREGDTPVDVQRYANAWKVARQEIEAY 249 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI 281 + V++ +EPG +V L + V + ++ + VD+ + + Sbjct: 250 LGHGVRMEIEPGRFLVAEAGCLVSEVRVVKTAGQHHFVLVDTGFNDLMRPAMYGAYHGMS 309 Query: 282 YPNTGPYTAM-------VCGRSCLAGDIFGEF------HFEKPVKIGDRISFEDVAGYNI 328 + + V G C +GDIF + ++GD + D Y Sbjct: 310 LLDAAGHPVERPQQLTVVGGPLCESGDIFTQDDECLTPRPLPQARVGDLLVLHDTGAYGA 369 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R D Sbjct: 370 SMSSNYNSRPLLPEVLFENGQPKLIRRRQPLADLLA 405 >gi|291531190|emb|CBK96775.1| Diaminopimelate decarboxylase [Eubacterium siraeum 70/3] Length = 423 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 55/393 (13%), Positives = 113/393 (28%), Gaps = 30/393 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I TP+++ D++ + N G + A+K + + L + G SS Sbjct: 19 IPTPFHIYDEKGIRETARKLYDAFSWNKGFREYFAVKATPNPYIMEILKEEGCGFDCSSY 78 Query: 61 YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-K 117 E+ML + + + A D + I + + ++ Sbjct: 79 TELMLSDKVGAKQHDIMFSSNATPDEDFKLAYKLGAIINLDDFTHIDVLDKLTGIPETIC 138 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKS 171 S+ ++ G + IE+ G+ + Sbjct: 139 CRYNPGGEFKTSEKGNVMDTPKDAKYGMTHEQIIEAYKILKEKGAKRFGMHAFLASNTLT 198 Query: 172 FLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + + + Q+ +I+L GG+ K + + + E K Sbjct: 199 NEYYPVLAGILFRTAVEIKEKTGVQLSFINLSGGVGVPYKPDQPANDIKVIGEGVRKAYE 258 Query: 228 QI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276 +I + E G ++ L + K + +D+ + + Sbjct: 259 EILVPAGMGDVAIFTELGRYMLAPNGALVAKAIREKHIYKEYIGLDACAANLMRPAIYGA 318 Query: 277 ESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + + G C D F + IGD I D + + Sbjct: 319 YHHITVMGKENQPCDHKYDITGGLCENCDKFAVDRMLPKIDIGDIIYIHDTGAHGFSMGY 378 Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 +NG + DG+ K IR + DY+ Sbjct: 379 NYNGKLRSAEVLLKEDGSFKLIRRAETPKDYFA 411 >gi|220910057|ref|YP_002485368.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7425] gi|219866668|gb|ACL47007.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7425] Length = 458 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 47/396 (11%), Positives = 108/396 (27%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L K ++L A K + + G +S Sbjct: 54 GSPLYILDETTLRQGCQHYQQGMKQFYPGDFQVLYASKAWNCLATCAIVASEGLGIDVAS 113 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117 E+ + ++ K + I+ + +L + A + Sbjct: 114 GGELYTALQAGVNPDKIYFHGNNKSLTELELALGNGCAIVADNWLELQRLATLADQFPSP 173 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCENK 170 LR+ P + ++ G S+ ++ L FH + ++ Sbjct: 174 PRVMLRLTPGIECHTHEYIRTGHLDNKFGFDPNQLEPLLEFASKHPQIHWLGFHAHIGSQ 233 Query: 171 SFLCFSAM-----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------- 218 F L + + + +++GGG+ + Sbjct: 234 IFELQPHTDLSAVLVDWLVQAKAAGLGMNELNVGGGLGIRYLESDQPPSITEWVKTVTTG 293 Query: 219 ----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDY 272 + ++ EPG ++V + + V + + Sbjct: 294 IIAACQSRNLPLPKLLCEPGRSLVGPAGLTAYRMGGRKDVPGIRTYVAVDGGMSDNPRPI 353 Query: 273 LLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + N T + G+ C +GD+ + + D YN Sbjct: 354 TYQAVYRAVVGNHMAAPLAETVTIAGKHCESGDVLIKDIQLPATQPDDIFVVLTTGAYNY 413 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + P + +R +Y+D Sbjct: 414 SMASNYNRLTRPAAVLVKEGEANLILRRETYSDLLR 449 >gi|300923176|ref|ZP_07139232.1| diaminopimelate decarboxylase [Escherichia coli MS 182-1] gi|301326168|ref|ZP_07219554.1| diaminopimelate decarboxylase [Escherichia coli MS 78-1] gi|300420536|gb|EFK03847.1| diaminopimelate decarboxylase [Escherichia coli MS 182-1] gi|300847133|gb|EFK74893.1| diaminopimelate decarboxylase [Escherichia coli MS 78-1] Length = 420 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDKATLERVSELQIPVNAGSVDMLDQLGLVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|281423178|ref|ZP_06254091.1| diaminopimelate decarboxylase [Prevotella oris F0302] gi|281402514|gb|EFB33345.1| diaminopimelate decarboxylase [Prevotella oris F0302] Length = 386 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 121/366 (33%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+Y D + L L K++ + A+K A + +++ G S Sbjct: 14 LSTPFYYYDTELLRRTLTEIKTEANKHSNYIVHYAIKANANTKLLKIIHEAGLGADCVSG 73 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116 E+ E F Y K + + + FN ++ +L + A K Sbjct: 74 GEINAALEAGFPAFEIVYAGVGKSDWEINLGLDNEIFCFNVESIPELEVINELAGTKGKV 133 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP V ++ G +D + + GL FH + Sbjct: 134 ANVAFRINPDVGAHTHSSITTGLAENKFGIAMRDMESIINHALHMKHVKFIGLHFHIGSQ 193 Query: 169 NKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------RL 218 F+ + +++ + + I++GGG+ + Sbjct: 194 ILDMSDFVALCRRINDLQNQLDQHGISVRHINVGGGLGIDYEHPDKSSIPDFKAYFDTYA 253 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLY-- 275 K ++ Q++ E G A+V +L T L + + + K IVD+ + + L Sbjct: 254 KYLKLRHGQQLHFELGRAVVGQCGSLITRTLYVKQGDTKQFAIVDAGMTELIRPALYQAV 313 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + I N V G C D+F + GD ++ Y + +N Sbjct: 314 HKIENISSNRPTEIYDVVGPICETSDVFAKDVLLNKTYRGDLLAIRSAGAYGEIMASQYN 373 Query: 336 GINMPT 341 +P Sbjct: 374 CRKLPK 379 >gi|167747269|ref|ZP_02419396.1| hypothetical protein ANACAC_01983 [Anaerostipes caccae DSM 14662] gi|167653247|gb|EDR97376.1| hypothetical protein ANACAC_01983 [Anaerostipes caccae DSM 14662] Length = 416 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 59/391 (15%), Positives = 111/391 (28%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + GT SSL Sbjct: 20 PTPFHLYDEKGIRETARNLNKAFSWNKGFKEYFAVKATPNPTILKILKEEGCGTDCSSLT 79 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G ++ E TI + ++ ++ K+ A Sbjct: 80 ELMMSDRCGFDGSEIMFSSNDTPAEEFVLAKKLGATINLDDITHIDFLKEAAGIPEVISC 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFH------NNCEN 169 V + D ++ G ++ + V H Sbjct: 140 RYNPGGVFSLGTDIMDNPG-DAKYGMTRAQMTEAFLKLKELGVKEFGIHSFLASNTVTNE 198 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + I +I+L GG+ + + E K + Sbjct: 199 YYPTLAKQLFELAVELQKETGVHIGFINLSGGVGVPYLPDQEGNDIAVIGEGVHKAFDEV 258 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T + K + VD+ + + Sbjct: 259 LVPAGMGDVKIFTELGRYMLAPNGHLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 318 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + G C D F ++ GD + D + + Sbjct: 319 HITVVGKENEPCDHMYDITGSLCENNDKFAIDRKLPEIENGDLLVIHDTGAHGFAMGYNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+ + IR + DY+ Sbjct: 379 NGKLKSAEILLKEDGSTEMIRRAETPEDYFA 409 >gi|332362247|gb|EGJ40047.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1056] Length = 416 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 120/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKESAGIPKIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G I++ E ++ L + + Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHAFLSSNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVKLDFINLSGGVGINYQPDGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRSESETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409 >gi|317471013|ref|ZP_07930390.1| diaminopimelate decarboxylase [Anaerostipes sp. 3_2_56FAA] gi|316901524|gb|EFV23461.1| diaminopimelate decarboxylase [Anaerostipes sp. 3_2_56FAA] Length = 416 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 59/391 (15%), Positives = 111/391 (28%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + GT SSL Sbjct: 20 PTPFHLYDEKGIRETARNLNKAFSWNKGFKEYFAVKATPNPTILKILKEEGCGTDCSSLT 79 Query: 62 EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G ++ E TI + ++ ++ K+ A Sbjct: 80 ELMMSDRCGFDGSEIMFSSNDTPAEEFVLAKKLGATINLDDITHIDFLKEAAGIPEVISC 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFH------NNCEN 169 V + D ++ G ++ + V H Sbjct: 140 RYNPGGVFSLGTDIMDNPG-DAKYGMTRAQMTEAFLKLKELGVKEFGIHSFLASNTVTNE 198 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + I +I+L GG+ + + E K + Sbjct: 199 YYPTLAKQLFELAVELQKETGVHIGFINLSGGVGVPYLPDQEGNDIAVIGEGVHKAFDEV 258 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T + K + VD+ + + Sbjct: 259 LVPAGMGDVKIFTELGRYMLAPNGHLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 318 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + G C D F ++ GD + D + + Sbjct: 319 HITVVGKENEPCDHMYDITGSLCENNDKFAIDRKLPEIENGDLLVIHDTGAHGFAMGYNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+ + IR + DY+ Sbjct: 379 NGKLKSAEILLKEDGSTEMIRRAETPEDYFA 409 >gi|323160019|gb|EFZ45983.1| diaminopimelate decarboxylase [Escherichia coli E128010] Length = 420 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 56/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + + +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIEQATLERVSELQIPVNAGSVDMLDQLGLVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|257871090|ref|ZP_05650743.1| diaminopimelate decarboxylase [Enterococcus gallinarum EG2] gi|257805254|gb|EEV34076.1| diaminopimelate decarboxylase [Enterococcus gallinarum EG2] Length = 434 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 61/400 (15%), Positives = 126/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ ++ + + A K F M +++ S Sbjct: 25 GTPLYVFSVTEIRTQCRAIREEFLSRYENTRAAYASKAFNTLAMLRLIDEEGLSLDVVSG 84 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E +N K D A+ II + ++ + Q+ +K Sbjct: 85 GELYTAIQAGFPAEQIEFNGNNKSIDELALAIDYGVGRIIVDGSQEIGLIRALCQEKQRK 144 Query: 118 IGLR--INPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + I P V+ + S+ G ++ I++ + GL FH Sbjct: 145 AKVMFRITPEVNVQTHAFISTGQKDSKFGIPLDEEILFPLIEEVIDAPEIDFYGLHFHIG 204 Query: 167 CE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI-----------HFTDKDYPV 211 + + A L + + F ++ +++GGG ++ PV Sbjct: 205 SQLSDNHSHIAATEAALALVLEIHHRFDYTVKELNVGGGFGVRYTEKDIRQPYSYFLDPV 264 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + + + + +EPG +IV T+ I + +D + ++ Sbjct: 265 MATIETFCQAHQLQRPTVVIEPGRSIVAEAGISLHTIGTIKTLPQIRTYASIDGGMTDNI 324 Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E I N T + G++C + DI + V+ GD + Sbjct: 325 RPGLYQAEYTGILANRAAEAATETVTISGKACESTDILVKDLQLPKVETGDLFATFATGA 384 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + +P + + ++ N Sbjct: 385 YGYSMASNYNKLAIPAVVFVEKGHAELVVERQTFQQLIQN 424 >gi|167032598|ref|YP_001667829.1| diaminopimelate decarboxylase [Pseudomonas putida GB-1] gi|166859086|gb|ABY97493.1| diaminopimelate decarboxylase [Pseudomonas putida GB-1] Length = 410 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 127/398 (31%), Gaps = 44/398 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P + D + ++ + + A K + + + + SL E Sbjct: 16 GSPLWAYDTGTIAERVEQLK-VFD----TVRFAQKANPNLHVLRLMRAHGLVLDAVSLGE 70 Query: 63 VMLGHE------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + A ++ V+++ + ++ L + +++ Sbjct: 71 MERAFAAGASVGGDPAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLRQLGERS--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 ++ +RINP + + S+ G ++ I++ ++ G+ H Sbjct: 129 RVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHGLHLVGVHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224 + + +++ + G IE S+GGG+ K ++ + Q ++ Sbjct: 189 -YQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRKTDKPVDLQRYAQTWAVARKEIE 247 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA 279 + V++ +EPG +V + L V + + V++D+ + + Sbjct: 248 AMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVMIDAGFNDLMRPAMYGAYHG 307 Query: 280 TIYPNTGPYTAM-------VCGRSCLAGDIFGEF------HFEKPVKIGDRISFEDVAGY 326 + V G C +GD+F + ++GD + D Y Sbjct: 308 MTLLDANGQPVDRPRQPTVVAGPLCESGDVFTQDDQELTPQELPQAQVGDLLVIHDAGAY 367 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + D + Sbjct: 368 GASMSSSYNSRPLLPEFLIEDGALRMIRRRQTVQDLLD 405 >gi|309800151|ref|ZP_07694337.1| carboxynorspermidine decarboxylase [Streptococcus infantis SK1302] gi|308116198|gb|EFO53688.1| carboxynorspermidine decarboxylase [Streptococcus infantis SK1302] Length = 360 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 109/317 (34%), Positives = 166/317 (52%), Gaps = 6/317 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + P Y+ID KL N +++ AG K+LLA K ++ + + ++QY+ GTT+S LY Sbjct: 6 VPAPAYVIDLAKLEENCSILQEVQEKAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E L E+F GE H + A+K+ +++ +L D I FN+ QL K+ + ++ +GLR Sbjct: 66 EAKLAREEFPGEVHVFAPAFKESDMEELLQISDHIDFNSERQLRKYGQRCREAGISVGLR 125 Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 INP S L DP P SR G ++ V+GL FH CE + LK Sbjct: 126 INPQCSTQGDHALYDPCAPGSRFGVTSDKIPSDLLELVDGLHFHTLCEQGADD-LQTTLK 184 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 +E +FG ++ Q++W+++GGG H T DY V +K E Y++ +Y+EPGEAI N Sbjct: 185 AVEDQFGAYLHQVKWLNMGGGHHITRDDYDVDLLISEIKRIRETYNLDVYVEPGEAIALN 244 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296 L T VLDI EN +++D+S H+PD L + PYT + + Sbjct: 245 AGYLATEVLDIVENGIETLVLDASASCHMPDVLEMPYRPPLRDGFEAQEKPYTYRLSSNT 304 Query: 297 CLAGDIFGEFHFEKPVK 313 CL GD+ G + +K Sbjct: 305 CLTGDVIGIIALKNRLK 321 >gi|260577571|ref|ZP_05845510.1| diaminopimelate decarboxylase [Corynebacterium jeikeium ATCC 43734] gi|258604295|gb|EEW17533.1| diaminopimelate decarboxylase [Corynebacterium jeikeium ATCC 43734] Length = 470 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 51/408 (12%), Positives = 114/408 (27%), Gaps = 47/408 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D++ G + A K F + + + + +SL E Sbjct: 61 GTPAFVMDEEDFRARCRRLAKAFGG-GHYVHYASKAFLSKTVARWVMEEGLSLDVASLGE 119 Query: 63 VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + + AV + I+ +++ ++ A +L + Sbjct: 120 LQVALAAGFPAERITVHGNNKSPEFLRLAVSEGAELIVVDSLQEIEALSTVAGELGKSQD 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-----DKIESEIK----NVNGLMFHNNCE 168 + +R+ P V + + G + + GL H + Sbjct: 180 VLVRVTPGVHVDTHEFIATSHEDQKFGFSLASGAAHRAAMACHTADGVRLRGLHCHVGSQ 239 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ----------IEWISLGGGIHFTDKDYPVKDFCQRL 218 F+ + + + + ++ + LGGG + + Sbjct: 240 VFEASGFALAAERLLGLWKQLLDSTAALSDAPTSLDTLDLGGGYGIAYMPDQEALDVEEV 299 Query: 219 KEFSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--- 264 + + +EPG AI + V + + + Sbjct: 300 ASDLKSKVRKAAEAAGVPVPKLNVEPGRAIAGPSMITLYRVGTVKDVEVADGMTRRYISV 359 Query: 265 ---VEAHVPDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKP-VKIGD 316 + ++ L E N + G C +GD+ V+ GD Sbjct: 360 DGGMSDNIRPALYQAEYDCRVANREVAGELLPTRIVGSHCESGDVLVNDALVPDDVRPGD 419 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + +N + P + IR + +D Sbjct: 420 LLMIGATGAYCYAMASRYNMMTRPPVVRVADGEARLMIRRETIDDVLA 467 >gi|68536438|ref|YP_251143.1| hypothetical protein jk1353 [Corynebacterium jeikeium K411] gi|68264037|emb|CAI37525.1| lysA [Corynebacterium jeikeium K411] Length = 470 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 51/408 (12%), Positives = 114/408 (27%), Gaps = 47/408 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D++ G + A K F + + + + +SL E Sbjct: 61 GTPAFVMDEEDFRARCRRLAKAFGG-GHYVHYASKAFLSKTVARWVMEEGLSLDVASLGE 119 Query: 63 VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + + AV + I+ +++ ++ A +L + Sbjct: 120 LQVALAAGFPAERITVHGNNKSPEFLRLAVSEGAELIVVDSLQEIEALSTVAGELGKSQD 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-----DKIESEIK----NVNGLMFHNNCE 168 + +R+ P V + + G + + GL H + Sbjct: 180 VLVRVTPGVHVDTHEFIATSHEDQKFGFSLASGAAHRAAMACHTADGVRLRGLHCHVGSQ 239 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ----------IEWISLGGGIHFTDKDYPVKDFCQRL 218 F+ + + + + ++ + LGGG + + Sbjct: 240 VFEASGFALAAERLLGLWKQLLDSTAALSDAPTSLDTLDLGGGYGIAYMPDQEALDVEEV 299 Query: 219 KEFSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--- 264 + + +EPG AI + V + + + Sbjct: 300 ASDLKSKVRKAAEAAGVPVPKLNVEPGRAIAGPSMITLYRVGTVKDVEVADGMTRRYISV 359 Query: 265 ---VEAHVPDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKP-VKIGD 316 + ++ L E N + G C +GD+ V+ GD Sbjct: 360 DGGMSDNIRPALYQAEYDCRVANREVAGELLPTRIVGSHCESGDVLVNDALVPDDVRPGD 419 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + +N + P + IR + +D Sbjct: 420 LLMIGATGAYCYAMASRYNMMTRPPVVRVADGEARLMIRRETIDDVLA 467 >gi|322373867|ref|ZP_08048402.1| protein TabA [Streptococcus sp. C150] gi|321277239|gb|EFX54309.1| protein TabA [Streptococcus sp. C150] Length = 421 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 67/392 (17%), Positives = 123/392 (31%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 24 PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILRILKEEGCGVDCATDT 83 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F T ++ E N D TI + + ++ A + Sbjct: 84 ELVMSKKIGFDNTTISFTSNDTRSEEFVYARNIDATINLDAYEDIFFLEEVAGLPET-LS 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCEN 169 LR NP +S + S+ G + + K V H Sbjct: 143 LRFNPGGVFSLGTDIMDHPEESKFGMTKEQLFKGYAYLQEKGVKSFGLHAFLASNTVTNE 202 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---- 225 + + + + +++I+L GG+ ++ + E Sbjct: 203 YYPTLAAQLFELAVEIKNELGVSLDFINLSGGVGVDYTPANKQNDIVAIGEGVHAKFDEI 262 Query: 226 -------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + IY E G + + T VL I + + V VD+S + + Sbjct: 263 LVPNGLGHISIYTELGRYMTAPHGLVVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAYH 322 Query: 279 ATIYPNTGPYTAMVC---GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 V G C D F + +IGD + D + + +N Sbjct: 323 HITNMTNPNGEIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNYN 382 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 G + DGT + IR + NDY+ L Sbjct: 383 GRLRSAEILYQEDGTARMIRRTETMNDYFATL 414 >gi|260173808|ref|ZP_05760220.1| diaminopimelate decarboxylase [Bacteroides sp. D2] gi|315922071|ref|ZP_07918311.1| diaminopimelate decarboxylase [Bacteroides sp. D2] gi|313695946|gb|EFS32781.1| diaminopimelate decarboxylase [Bacteroides sp. D2] Length = 386 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 63/366 (17%), Positives = 118/366 (32%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + K + A+K A + + + G S Sbjct: 13 LQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + K + FN ++ +L + A Q Sbjct: 73 GEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKV 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP V ++ G +D E + GL FH + Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218 F+ + ++ + +E I++GGG+ + F Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFATYA 252 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 + + ++ E G A+V +L + VL + + + + D+ + + L Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQAF 312 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASRYN 372 Query: 336 GINMPT 341 +P Sbjct: 373 CRELPK 378 >gi|313499803|gb|ADR61169.1| LysA [Pseudomonas putida BIRD-1] Length = 410 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 129/398 (32%), Gaps = 44/398 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P + D + + + + + + A K + + + + SL E Sbjct: 16 GSPLWAYDTRTIADRVKQL-NVFD----TVRFAQKANPNLHVLRLMRAHGLVLDAVSLGE 70 Query: 63 VMLGHE------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + A ++ V+++ + ++ L + +++ Sbjct: 71 MERAFAAGASVDGDPAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLRQLGERS--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 ++ +RINP + + S+ G ++ I++ ++ G+ H Sbjct: 129 RVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHGLHLVGVHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224 + + +++ + G IE S+GGG+ K ++ + Q ++ Sbjct: 189 -YQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRSTDKPVDLQRYAQTWAVARKEIE 247 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA 279 + V++ +EPG +V + L V + + V++D+ + + Sbjct: 248 AMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVMIDAGFNDLMRPAMYGAYHG 307 Query: 280 TIY-------PNTGPYTAMVCGRSCLAGDIFGEF------HFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F + ++GD + D Y Sbjct: 308 MTLLDADGQAVDRPRQPTVVAGPLCESGDVFTQDDQALTPQDLPQAQVGDLLVIHDAGAY 367 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + D + Sbjct: 368 GASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLS 405 >gi|317493899|ref|ZP_07952316.1| diaminopimelate decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918226|gb|EFV39568.1| diaminopimelate decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 420 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 51/398 (12%), Positives = 119/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + ++ + A K + + ++Q S SL E+ Sbjct: 27 PVWVYDGEIIKQQIEKLREFDV-----IRFAQKACSNIHILRLMHQQGVKVDSVSLGEIE 81 Query: 65 LGH-----EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + D A + + + + L + +++ + Sbjct: 82 RALLAGFQPGGSPSQIVFTADVLDEATIARVVELNIPVNAGSADMLKQLGERS--AGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G ++ I+ + GL H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWFEELPQALALIKQYDLELIGLHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + + ++ I+ IS GGG+ + Sbjct: 199 QHLAQVCDTMVRQVIELGHDIQAISAGGGLSIPYQKGDESINVSHYYGLWNDARERIARH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V + +EPG +V + L V + + ++ V+VD+ + + Sbjct: 259 LGHPVHLEIEPGRYLVAESGVLVAQVRAVKNMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 +++ G C +GD+F E ++GD + F D Y Sbjct: 319 LLPADGRDVTAQPRVESVIGGPLCESGDVFTQKAGGEVETRSIPAAQVGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFENGESRLIRRRQTIEELLA 416 >gi|87200688|ref|YP_497945.1| diaminopimelate decarboxylase [Novosphingobium aromaticivorans DSM 12444] gi|87136369|gb|ABD27111.1| diaminopimelate decarboxylase [Novosphingobium aromaticivorans DSM 12444] Length = 419 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 109/375 (29%), Gaps = 23/375 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP Y+ + L + VK+ A+K + L G S Sbjct: 25 VGTPVYVYSRATLTRHARVFRDALSILPAVKIAFAVKSNPNLAVLKVLAAEGYGADVVSG 84 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK----AQKLH 115 E+ + ++ K FN S+ + + Sbjct: 85 GEMERALAAGMKPDGIVFSGVGKTEAEMRRGIEAGIGQFNLESEEEGLELAEIAASMGKV 144 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168 LR+NP V + ++ G + N+ GL H + Sbjct: 145 ASAALRVNPDVDAGTHGKISTGKAENKFGVPFDRAAAIYARLADTPGLNMRGLALHIGSQ 204 Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEF 221 A + + + + LGGG+ K ++ + + Sbjct: 205 LSKLDPLEAAFTKVGGLMRAIREGGHAVTHMDLGGGVGVPYKAGEVFPQPAEYAAMVAKV 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278 + + V + EPG I NT L T V+ + E + +V D+++ L Sbjct: 265 TADWGVTLMFEPGRVITGNTGVLMTQVVRVKEGAGHPWVVVDAAMNDLARPALYDAWHDF 324 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 A + P + A + G C + D F V GD F Y N +N Sbjct: 325 AAVEPTGETFVANIVGPICESSDTFAMARTIDKVGRGDLAVFRTAGAYGATMANTYNSRP 384 Query: 339 MPTIAVKNVDGTIKA 353 + + + + Sbjct: 385 LVPEVMVDGEKWAVV 399 >gi|42523266|ref|NP_968646.1| hypothetical protein Bd1777 [Bdellovibrio bacteriovorus HD100] gi|39575471|emb|CAE79639.1| lysA [Bdellovibrio bacteriovorus HD100] Length = 391 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 68/367 (18%), Positives = 125/367 (34%), Gaps = 28/367 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D + K G +L A+K G+ L G SL E+ Sbjct: 27 PIYVYDLDSVAQRYQAMSQALK--GTRLFFAVKSNPNPGVLQKLKSLGAGADVVSLGEIK 84 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--KIG 119 E F + Y+ K A I ++ +L + A++L+K ++ Sbjct: 85 RALECGFSPQDIVYSGVGKTKFELAEALKLGIYQINVESLPELERIGVLARELNKKAQVA 144 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCENKS 171 LR+NP V + ++ G + S+ ++ G+ H + Sbjct: 145 LRLNPDVDINTHPYIATGLKDNKFGMERSMVPALVKCLKSYSDSIDLVGVSLHLGSQMLE 204 Query: 172 FLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF------- 221 F + LK ++ E ++ GGG+ ++ L+++ Sbjct: 205 FSGYDEALKRLKTVYLELQAQFPTLKKFDFGGGLGIFYDRVDLQLEESLLQKYAQITLEN 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES-- 278 + ++ EPG +V + L T V I E K VIVD+ + + L Sbjct: 265 LSDLNCELQAEPGRWLVAHCGALITQVQYIKETSAKTFVIVDAGMNHLIRPSLYEATHRI 324 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + + V G C + D F + V+ GD ++ D Y + + +N Sbjct: 325 EPLKRKDAAFVVDVVGPICESSDFFAKEISLTKVQEGDFVAIMDSGAYGYSMASVYNLQE 384 Query: 339 MPTIAVK 345 +P Sbjct: 385 LPLEICI 391 >gi|296128907|ref|YP_003636157.1| diaminopimelate decarboxylase [Cellulomonas flavigena DSM 20109] gi|296020722|gb|ADG73958.1| diaminopimelate decarboxylase [Cellulomonas flavigena DSM 20109] Length = 458 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 57/416 (13%), Positives = 123/416 (29%), Gaps = 54/416 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK------NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++D+ L + + GV + A K + ++ Sbjct: 37 GTPAYVVDEADLRSRARAYRTAFETACAQVGTGVDVYYAGKALLTRAVARWVHDEGLRVD 96 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 ++S E+ + G + D A+ + II +++ ++++ + Sbjct: 97 TASGGELAVALAAGVPGADIGLHGNNKSDDELRAALDAGVGRIIVDSLVEVDRLAALVRA 156 Query: 114 LHKKIG------LRINPSVSYSKFILADPNRPFSRLGEKCK-------------DKIESE 154 G +R+ V + G +E Sbjct: 157 HRGPDGAPAPVMVRVTTGVHAGGHEFISTAHEDQKFGLSLASDGGDSPALTALLRVVERP 216 Query: 155 IKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 ++ G+ H + F +L ++ + LGGG Sbjct: 217 ELHLLGIHSHIGSQILDPSGFAVAAQRVLALRATLHARTGVLVDEVDLGGGYGIAYLPGD 276 Query: 211 VK--------DFCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259 V + Q + + + + ++ +EPG AIV TV + + Sbjct: 277 VPLDPGRIAKEVAQAVADAARELGTPLPRLSIEPGRAIVGPAGLTLYTVGTVKPVRLDDG 336 Query: 260 IVDSS------VEAHVPDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309 V + + ++ L + + P A V G+ C +GDI Sbjct: 337 RVRTYVSVDGGMSDNIRPALYGAHYHAEVVSRVSDAEPVLARVVGKHCESGDIVVHEVRL 396 Query: 310 K-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 V+ GD ++ Y + + +N + P + + +R + +D Sbjct: 397 PGDVRAGDLLAVAATGAYGRSMASNYNLLTRPPVVAVTAGESRVLVRRETVDDLLA 452 >gi|293372875|ref|ZP_06619249.1| diaminopimelate decarboxylase [Bacteroides ovatus SD CMC 3f] gi|299146584|ref|ZP_07039652.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_23] gi|292632164|gb|EFF50768.1| diaminopimelate decarboxylase [Bacteroides ovatus SD CMC 3f] gi|298517075|gb|EFI40956.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_23] Length = 386 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 63/366 (17%), Positives = 118/366 (32%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + K + A+K A + + + G S Sbjct: 13 LQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + K + FN ++ +L + A Q Sbjct: 73 GEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKV 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP V ++ G +D E + GL FH + Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218 F+ + ++ + +E I++GGG+ + F Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFATYA 252 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 + + ++ E G A+V +L + VL + + + + D+ + + L Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQAF 312 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372 Query: 336 GINMPT 341 +P Sbjct: 373 CRELPK 378 >gi|315084726|gb|EFT56702.1| diaminopimelate decarboxylase [Propionibacterium acnes HL027PA2] Length = 476 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 65/403 (16%), Positives = 128/403 (31%), Gaps = 43/403 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D+ L + A K F + ++Q + + E Sbjct: 63 GSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTIASWIDQEGLFLDTCTGGE 120 Query: 63 VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 ++ + + K D A+ II +++ ++ + + ++ H + Sbjct: 121 LITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G S+ ++ G+ H + Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ 240 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +K +E+ + + + LGGG + L + Sbjct: 241 IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE 300 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267 I LEPG IV TT TV + + V VD + Sbjct: 301 IVTLEARGRGMEVPHISLEPGRVIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD 360 Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 ++ L E + + N P + G+ C AGDI + V GD I+ Sbjct: 361 NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSYNDYYN 364 Y+ + + +N + P + N D G + +R + +D Sbjct: 421 AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDLLA 463 >gi|123966414|ref|YP_001011495.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9515] gi|123200780|gb|ABM72388.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9515] Length = 457 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 124/398 (31%), Gaps = 35/398 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 ++P Y++D+ L N+ + + A K ++ M + + G + S Sbjct: 49 ESPLYILDEITLRNSCRAYKKALEKYYRGVSLPIYASKANSSLFMSNLVASEGFGLDAVS 108 Query: 60 LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + E ++ D EI + N +I + L + ++ + L+ Sbjct: 109 EGELLTALKGGVPNEKIVFHGNNKSDKEIAFAIKNKIKVIVDNEHDLKRLEEISNSLNFD 168 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168 + + I P + S+ G + I+++ + GL H + Sbjct: 169 LEIMIRFTPGIECHTHEYIRTGSFDSKFGFGIESLTKLFGVIIKTKHLKLIGLHAHIGSQ 228 Query: 169 NKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR-------- 217 + + + + F I+ +++GGG+ Sbjct: 229 IFELEPHKDLGEIMVNVMLQAKKFGHNIKELNVGGGLGIKYTQEDDPPSIDEWIKTVSSS 288 Query: 218 LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 +++ +K + EPG +IV+ + E VD + + Sbjct: 289 IEQACKKNKLDLPLLMCEPGRSIVSTAGVTIYKIGSFKEIPGIRTYLSVDGGMSDNPRPI 348 Query: 273 LLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + V G+ C +GD+ + K GD I YN Sbjct: 349 TYQSNYSACLVNDPLNINSKNKYTVAGKHCESGDVLFKEIELGKCKTGDLICVFGTGAYN 408 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N I P + + S +D N Sbjct: 409 NSMSSNYNRIPKPAAVLVCNGEAEIIQKRESPHDLLKN 446 >gi|118385090|ref|XP_001025683.1| diaminopimelate decarboxylase family protein [Tetrahymena thermophila] gi|89307450|gb|EAS05438.1| diaminopimelate decarboxylase family protein [Tetrahymena thermophila SB210] Length = 436 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 74/403 (18%), Positives = 127/403 (31%), Gaps = 45/403 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59 TP Y+ + Q + L K K L A K + + + G + S Sbjct: 27 DTPLYVYNSQVIKERCQQLLNALKLLPTQTKALYACKANTNIAIIKLMKEQGIQGIDAVS 86 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------------ 106 + EV+L F G + + + ++ + Sbjct: 87 IQEVLLAKKAGFEGRDIQFTENFIGQKEVEDSLKEGILLCIGELDTLETLGQRLQSKKLV 146 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNG 160 K+ K+ +RINP V + P S+ G C E + G Sbjct: 147 LKETENGQKLKVAVRINPDVGVGECEHTITGGPKSKFGIYCNQIEEIIKISEKYPIEIEG 206 Query: 161 LMFHNNCE--NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD--------YP 210 + H + +K I + I +++I++GGGI +D Sbjct: 207 IHQHIGSNMVQNHLDKYVQSIKKI-FDVALQIKGLKFINVGGGIGVPYEDGVKPLDLIEA 265 Query: 211 VKDFCQRLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEA 267 + K F EKY + + EPG +V + L TTV I + D+ + Sbjct: 266 YSKIAEEYKIFKEKYGHDVEIRVEPGRFLVAESGHLLTTVTAIKKNQYSTWIGTDTGMNH 325 Query: 268 HVPDYLL--YQESATIYPNT-------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 + L Y + VCG C +GD+FG+ + VK D + Sbjct: 326 LIRPALYESYHKIENASNFESTNNEDSQRQKVNVCGNICESGDVFGQNRLIRTVKDDDIL 385 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 + + Y + +N N P + + R + D Sbjct: 386 AIYNGGAYGYCMASNYNSRNRPAEILVDGSVDKLIRRRETLED 428 >gi|322420222|ref|YP_004199445.1| Orn/DAP/Arg decarboxylase 2 [Geobacter sp. M18] gi|320126609|gb|ADW14169.1| Orn/DAP/Arg decarboxylase 2 [Geobacter sp. M18] Length = 422 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 50/391 (12%), Positives = 124/391 (31%), Gaps = 34/391 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +TP+++ D+ + + + G + A+K + + + G SS+ Sbjct: 23 QTPFHIYDEAGIRETGASLVKAFSGIPGFREFFAVKALPNREILKLMKEMGFGFDCSSIP 82 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E++ + E + ++ A + + +S ++K + ++ Sbjct: 83 ELIQARQLGAKPEDIMFTSNNTSEEEFEFAARDGGCILNLDDISLIDKV-----PVFPEM 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCE---- 168 + N ++ G + +E+ + GL Sbjct: 138 ICFRYNPGPRRTGNVIIGNPEEAKYGVSHEQVVEAYRQAQARGARRFGLHTMVASNELDY 197 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224 +L+ E+ + +++++GGG + + + E + Sbjct: 198 TYIVETARMVLEVAEEVEAALAIKFDFVNIGGGFGIPYRPDQKPLDLPTMSAEITELFDG 257 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 ++ +++E G + L T ++ + + V +D+ + + + L Sbjct: 258 FRKRHGHAPAMFMESGRFMTGPHGALVATAINSKDTYRKYVGLDACMSSLMRPALYGSYH 317 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F P++ GD + D + + Sbjct: 318 HIDVLGKDGHERSEVYDVVGSLCENNDKFAIQRELPPIEDGDLVVIHDSGAHGHAMGFQY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG P + DG ++ IR + DY+ Sbjct: 378 NGRLRPKELMLRADGRVELIRRAETVEDYFA 408 >gi|157372071|ref|YP_001480060.1| diaminopimelate decarboxylase [Serratia proteamaculans 568] gi|157323835|gb|ABV42932.1| diaminopimelate decarboxylase [Serratia proteamaculans 568] Length = 420 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 54/398 (13%), Positives = 115/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + + + A K + + + + S SL E+ Sbjct: 27 PVWAYDAAIISERISQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + ++ L + + + Sbjct: 82 RALQAGFQPGGEPSEIVFTADVLDHATLARVSELKIPVNVGSIDMLEQLGQVSTGHP--V 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G D I+ + G+ H + Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQAVEKIQQYGLKLIGVHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK---- 224 + + ++ I IS GGG+ + + + E+ Sbjct: 199 QHLERVCDAMVQQVIDLGQDISAISAGGGLSIPYQYGEEAIDTEHYFGLWNSARERIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V + +EPG ++ L V + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 282 YPNTGPYTA--------MVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 ++ G C +GD+F E PV++GD + F D Y Sbjct: 319 LLPADGRDTANQPLRDTVIAGPLCESGDVFTQQAGGGIETRELPPVQVGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFENGEARLIRRRQTIEELIA 416 >gi|325978967|ref|YP_004288683.1| diaminopimelate decarboxylase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178895|emb|CBZ48939.1| Diaminopimelate decarboxylase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 414 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 120/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 19 PTPFHLYDEKGIREKARALNKAFAWNKGFKEYFAVKATPTPAILKILQEENCGVDCATEV 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+++ H+ + + E TI + + K+ A + LR Sbjct: 79 ELLMSHKLGFTDIMFSSNDTPAREFRYAKEIGATINLDAYEHIAFLKEVAGLPET-VSLR 137 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN----KS 171 NP ++ N S+ G I+ + + V G+ Sbjct: 138 YNPGGVFALGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKNFGIHSFLASNTVTNDYY 197 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--- 228 + + + + +I+L GG+ + + + + + + Sbjct: 198 PELARQLFELAVEVKEKTGVAVSFINLSGGVGVNYRPEQEPNDIAVIGKGVHRVFDEVLI 257 Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 PAGLGDVKIFTELGRFMLAPHGLLVTKVRHRKQTYRTYIGVDASAVNLMRPAMYDAYHHI 317 Query: 281 IY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 PN V G C D F + ++GD + D + + +NG Sbjct: 318 TNVSNPNGKLEVVDVVGSLCENNDKFAKQRELPEARVGDTLVIHDTGAHGFSMGYQYNGR 377 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + DG+ + IR + DY+ Sbjct: 378 LRSAEILYEEDGSARLIRRAETPEDYFA 405 >gi|160882269|ref|ZP_02063272.1| hypothetical protein BACOVA_00215 [Bacteroides ovatus ATCC 8483] gi|156112358|gb|EDO14103.1| hypothetical protein BACOVA_00215 [Bacteroides ovatus ATCC 8483] Length = 386 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 63/366 (17%), Positives = 118/366 (32%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + K + A+K A + + + G S Sbjct: 13 LQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + K + FN ++ +L + A Q Sbjct: 73 GEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKV 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP V ++ G +D E + GL FH + Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIGSQ 192 Query: 169 NKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218 F+ + ++ + +E I++GGG+ + F Sbjct: 193 ILDMSDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFATYA 252 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 + + ++ E G A+V +L + VL + + + + D+ + + L Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQAF 312 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372 Query: 336 GINMPT 341 +P Sbjct: 373 CRELPK 378 >gi|189462467|ref|ZP_03011252.1| hypothetical protein BACCOP_03156 [Bacteroides coprocola DSM 17136] gi|189430628|gb|EDU99612.1| hypothetical protein BACCOP_03156 [Bacteroides coprocola DSM 17136] Length = 386 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 70/365 (19%), Positives = 126/365 (34%), Gaps = 26/365 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D L + L+ K + A+K A + + ++ G S Sbjct: 13 LETPFYYYDANLLRDTLNVIRTEAAKYNKFCVHYAIKANANPKVLSIIREHGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F Y K + + D FN +V +L + A + Sbjct: 73 GEIAAAIKAGFPASKIVYAGVGKTDREINLGLDHDIFCFNVESVPELEVINELAAAKGKI 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168 ++ RINP V ++ G +E GL FH + Sbjct: 133 ARVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDRALEMNNVKFVGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222 F+ + +++++ +E I++GGG+ P+ DF + Sbjct: 193 ILDMGDFVALCNRINDLQEKLYARQIIVEHINVGGGLGIDYAHPNRQPIPDFADYFATYH 252 Query: 223 EKY----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--Y 275 + ++ E G ++V +L T V+ + + K IVD + + L Y Sbjct: 253 KHLKLRPQQTLHFELGRSVVGQCGSLITKVIYVKQGTNKQFAIVDGGMTDLIRPALYQAY 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + I T V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKIENITSEEPNETYDVVGPICESSDVFGKAIDLNRVKRGDLIALRSAGAYGEIMASGYN 372 Query: 336 GINMP 340 +P Sbjct: 373 CRTLP 377 >gi|238916881|ref|YP_002930398.1| diaminopimelate decarboxylase [Eubacterium eligens ATCC 27750] gi|238872241|gb|ACR71951.1| diaminopimelate decarboxylase [Eubacterium eligens ATCC 27750] Length = 426 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 65/392 (16%), Positives = 121/392 (30%), Gaps = 30/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TPY+L D++ + N N G + A+K + L Y G +S+ Sbjct: 21 PTPYHLYDEKGIRENAKRLKEAFSWNKGYREYFAVKATPNPYILKILKDYGCGVDCASMA 80 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQ-KLHKKI 118 E+M+G+ + E ++ E TI + ++ + K + + Sbjct: 81 ELMMGYALDYKPEEIMFSSNDTPAEEYAYANEIGATINLDDITHIEFLDKILDGKFPETM 140 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCE 168 R NP + N ++ G IE+ + K V H Sbjct: 141 SCRYNPGGYFQLGTSIMDNPGDAKYGMTHDQIIEAFKILKSKGVKHFGIHSFLASNTVSN 200 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + I++++L GG+ K + + E K + Sbjct: 201 EYYPTLAKILFELAVELRDKTGADIKFVNLSGGVGVAYKPEQEPNDIAVIGEGVHKVYDE 260 Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 IY E G ++ L T + K + VD+ + + Sbjct: 261 VLGAAGMGDVAIYTELGRFMLAPYGCLVTKAIHEKHIYKEYIGVDACASNLMRPAIYGAY 320 Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + V G C D F + +GD + D + + Sbjct: 321 HHITVAGKEDAPCDHKYDVTGSLCENSDKFAIDRMLPKIDMGDYLIIHDTGAHGFSMGYQ 380 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 +NG + DG+++ IR + DYY Sbjct: 381 YNGKLRSAELLLKEDGSVQMIRRAETIKDYYA 412 >gi|323351012|ref|ZP_08086669.1| diaminopimelate decarboxylase [Streptococcus sanguinis VMC66] gi|322122736|gb|EFX94445.1| diaminopimelate decarboxylase [Streptococcus sanguinis VMC66] Length = 416 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 119/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKVISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169 V + D ++ G I++ + G+ + + Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPDGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LIPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG I+ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNIRMIRRAEKPEDYFATL 409 >gi|262283244|ref|ZP_06061011.1| diaminopimelate decarboxylase [Streptococcus sp. 2_1_36FAA] gi|262261496|gb|EEY80195.1| diaminopimelate decarboxylase [Streptococcus sp. 2_1_36FAA] Length = 416 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 120/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKVISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169 V + + D ++ G I++ + G+ + + Sbjct: 139 RYNPGGVFELETSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + K+ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEKNDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LIPAGLGKVKIYTELGRFMLAPFGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRPLPISQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEEDGNVRMIRRAERPEDYFATL 409 >gi|283835394|ref|ZP_06355135.1| diaminopimelate decarboxylase [Citrobacter youngae ATCC 29220] gi|291068564|gb|EFE06673.1| diaminopimelate decarboxylase [Citrobacter youngae ATCC 29220] Length = 418 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 58/396 (14%), Positives = 118/396 (29%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRAQIAKLSQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 G + + D A +S + +V L + + ++ L Sbjct: 82 RALAAGYVPGNDEIVFTADMIDNATLARVSELQIPVNAGSVDMLEQLGQLS--PGHRVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 R+NP + + S+ G D I+ + G+ H + Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWYSDLPAALAVIQRYQLKLVGIHMHIGSGVD-YGH 198 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224 + + ++ F +E IS GGG+ Y R + Sbjct: 199 LEQVCGAMVRQVIEFGQDLEAISAGGGLSIPYREGEEAIDTDHYFGLWNAAREQIAQHLG 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA---- 279 + V++ +EPG +V L V + ++ V++D+ + + Sbjct: 259 HPVKLEIEPGRFLVAEAGVLVAQVRSVKAMGSRHFVLIDAGFNDLMRPAMYGSYHHISAL 318 Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 N +V G C +GD+F E V GD + D Y Sbjct: 319 AGDGRSLENAPQIETVVAGPLCESGDVFTQQEGGKVETRLLPAVAPGDYLVLHDTGAYGA 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + ++ Sbjct: 379 SMSSNYNSRPLLPEVLFDNGAARLIRRRQTIDELLA 414 >gi|256784097|ref|ZP_05522528.1| diaminopimelate decarboxylase [Streptomyces lividans TK24] gi|289767978|ref|ZP_06527356.1| diaminopimelate decarboxylase [Streptomyces lividans TK24] gi|289698177|gb|EFD65606.1| diaminopimelate decarboxylase [Streptomyces lividans TK24] Length = 440 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 54/399 (13%), Positives = 114/399 (28%), Gaps = 45/399 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +L D + +D + A K + + + + + S E Sbjct: 32 GTPLWLYDAATIRAQIDRLRRFDV-----IRYAQKACSNLHILRLMREEGVHVDAVSEGE 86 Query: 63 VMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + E + + + + + L++ A Sbjct: 87 IERALAAGYRVGGDDEPIVFTADLLNRSTLLRVVELGIPVNAGSPQMLDQVGRAA--PGH 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 + +RINP + + S+ G + ++ ++ GL H Sbjct: 145 PVWIRINPGFGHGHSRKTNTGGEHSKHGIWHEHLEESLALVDRHGLDLVGLHMHIGSGVD 204 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------- 223 + ++ + + K+ I IS GGG+ + R E + Sbjct: 205 -YGHLESVCETMVKQVRMAGRDIRAISAGGGLSVPYTPGDPEIDTDRYFELWDAARRELV 263 Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 + V++ +EPG +V L V N + VD+ + + Sbjct: 264 SELGHPVRLEIEPGRFLVAGAGVLAAEVRAQKPVGSNYFVLVDAGFNDLMRPAMYGSNHR 323 Query: 280 TIY-------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325 + ++ G C +GD+F E +GD + F D Sbjct: 324 VSVLDADGAPRASDARDTVLAGPLCESGDVFTQVEGGDVEPVPLPRTDVGDLVVFHDTGA 383 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + T R + + Sbjct: 384 YGASMSSTYNSRPLIPEVLVDGAETRLIRRRQTVAELLA 422 >gi|325695049|gb|EGD36952.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK150] Length = 416 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 116/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F + ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFARQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKVISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169 V + D ++ G I++ + G+ Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHAFLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRPMGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409 >gi|323978545|gb|EGB73627.1| diaminopimelate decarboxylase [Escherichia coli TW10509] Length = 420 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGH-EKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + + D +S + +V L++ + ++ Sbjct: 82 RALVAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALASDGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|157413561|ref|YP_001484427.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9215] gi|157388136|gb|ABV50841.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9215] Length = 455 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 53/397 (13%), Positives = 112/397 (28%), Gaps = 35/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L + + + A K ++ M + ++ G + S Sbjct: 49 DSPLYILDESTLRKSCRAYKKALEKYYPGESLPIYASKANSSIFMSNLVSSEGLGLDAVS 108 Query: 60 LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + E ++ D EID + N II + L + + + L+ Sbjct: 109 EGELLTALKGGVPNEKIVFHGNNKSDKEIDFAIRNNIKIIVDNDYDLKRLEGISNLLNHD 168 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168 + + I P + S+ G ++ + N+ G+ H + Sbjct: 169 LEIMIRFTPGIECHTHEYIKTGSFDSKFGFGIENLNNLFASISETKHLNLKGIHAHIGSQ 228 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF---------CQ 216 + + + F I +++GGG+ Sbjct: 229 IFELDPHKDLGEIMVNVILDAKKFGHNIRELNVGGGLGIKYTQNDDPPSIDEWVKTISAS 288 Query: 217 RLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDY 272 ++ + L EPG +IV+ + E + + Sbjct: 289 VVEACKKHNLDLPILMCEPGRSIVSTAGITIYKIGAFKEIPGIRTYFSVDGGMSDNPRPI 348 Query: 273 LLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + G+ C +GD+ K GD I YN Sbjct: 349 TYQSNYSACLVKNPFNINSKNKYTIAGKHCESGDVLFRDIELANCKTGDLICVFGTGAYN 408 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + + D Sbjct: 409 NSMSSNYNRIPRPAAILVCDGEAEIIQKRERPFDLLR 445 >gi|313156978|gb|EFR56410.1| diaminopimelate decarboxylase [Alistipes sp. HGB5] Length = 386 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 71/371 (19%), Positives = 135/371 (36%), Gaps = 26/371 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+YL D L L++ +Y K G K+ A+K + + +Y G +S E Sbjct: 14 ETPFYLYDTALLRQTLESVVYESKKYGYKVHYAIKANYDDHLLAIIREYGLGIDCASGNE 73 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + E F + Y K + + I ++ +L A + Sbjct: 74 LRKAVEAGFDPKGIVYAGIGKRDKELRYAIGQEIMAINCESIEELELVDRLAGEAGKKTD 133 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCENK 170 + LRINP + D + S+ G E K+ + N+ G+ H + + Sbjct: 134 VALRINPDIDPKTNHCIDTGQADSKFGISYEEVLEHAKEIKSLKHINIVGIHLHIGSQIR 193 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEK 224 F M I + ++ +GGG+ ++ P+ +F Sbjct: 194 ELHVFENMCNKVNVIVENLEKLGFSFRFVDVGGGLGVNYDVPENEPIPNFASLFSIVHNH 253 Query: 225 Y---SVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQES- 278 +++ E G +IV L TTVL + + LVIVD+S+ + L Sbjct: 254 LAVGDREVHFEFGRSIVAECGELITTVLFNKTTATGRKLVIVDASMTELIRPALYGSYHN 313 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + G +C + D+F E + + GD ++ + Y ++ + +N Sbjct: 314 IENITSEDEVREKYTIVGTACESTDVFDENVTLRKTRRGDLLTLKSAGAYGMSMASRYNL 373 Query: 337 INMPTIAVKNV 347 ++P + Sbjct: 374 HDLPGAVYSDE 384 >gi|257482668|ref|ZP_05636709.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|401153|sp|P31851|TABA_PSESZ RecName: Full=Protein tabA gi|151571|gb|AAB41802.1| Homology with E.coli and P.aeruginosa lysA gene; product of unknown function; putative [Pseudomonas syringae] gi|331013522|gb|EGH93578.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 420 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 60/383 (15%), Positives = 125/383 (32%), Gaps = 29/383 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+++ D++ ++ ++ + A+K + L + G SS E Sbjct: 23 PTPFHIYDERAIVQTHRNVAQAFADSAFRQYFAVKALPTPAILSLLLKEGSGLDCSSPVE 82 Query: 63 VMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +ML G+ + E L + F+ S L + + ++ Sbjct: 83 LMLAERLGARGDDIVFTSNNTSLSEYQMALQAGALVTFDDRSMLEQVIALPDIVAFRVSP 142 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI---------KNVNGLMFHN-NCENK 170 + S N S+ G + ++S ++G+M N Sbjct: 143 HGVIARSSQ-----MGNAQQSKFGIPEAELVQSYREAWDRGARRFGIHGMMCANELSLEA 197 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFS 222 + +++ + ++E+I++GGG+ + + LK+ Sbjct: 198 AVQAGVQVIEVGARVAREAGIELEYINIGGGLGIPYRIDDQALDLTAYADALKRALKQAF 257 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + ++ +E G I L + V++ + +V +D+S+ A + L Sbjct: 258 PHNTPKLLMELGRYISGPHGVLVSRVINRCSKGREIVGLDASMSALMRPGLYGAYHHLTL 317 Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P V G C D F IGD D + +NG Sbjct: 318 PFADQRPEGVFDVVGALCENFDKFAVDRLLPSPLIGDLALIHDTGAHGHAMGFTYNGRLR 377 Query: 340 PTIAVKNVDGT-IKAIREFSYND 361 P + DG ++ R +++D Sbjct: 378 PAELMLTDDGDVVEIRRAETFDD 400 >gi|25027833|ref|NP_737887.1| putative diaminopimelate decarboxylase [Corynebacterium efficiens YS-314] gi|259506224|ref|ZP_05749126.1| diaminopimelate decarboxylase [Corynebacterium efficiens YS-314] gi|24636795|sp|Q8RQM6|DCDA_COREF RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|20065737|dbj|BAB88825.1| diaminopimelate decarboxylase [Corynebacterium efficiens] gi|23493116|dbj|BAC18087.1| putative diaminopimelate decarboxylase [Corynebacterium efficiens YS-314] gi|259166201|gb|EEW50755.1| diaminopimelate decarboxylase [Corynebacterium efficiens YS-314] Length = 459 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 54/402 (13%), Positives = 115/402 (28%), Gaps = 41/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ ++ A K F + + +++ +S E Sbjct: 56 GTPLFVVDEDDFRARCRDMASAFGGPD-RVHYASKAFLSKTVARWVDEEGLSLDIASENE 114 Query: 63 VMLGHEK-FGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F GE + KD +N ++ ++ +L A + + Sbjct: 115 LGIALAADFPGERITAHGNNKDASFLRACVRNNLGHVVLDSAQELELLDYIAAGEGKVQP 174 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + +R+ P + + + G + +E + GL H + Sbjct: 175 VLIRVKPGIEAHTHEFIATSHEDQKFGFSLASGAAFDAARAAVNAENLELVGLHCHVGSQ 234 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----------KDYPVKD 213 F +L+ + + + LGGG + + Sbjct: 235 VFDAQGFSLAAERVLELYSRIHDELGVTLAELDLGGGYGIAYTAAEEPLNVVEVAHDLLT 294 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267 + + + +EPG AI +T V I + + + Sbjct: 295 AVGKTAAELGIEAPTVLVEPGRAIAGPSTVTVYEVGTIKDVDVDDETTRRYISVDGGMSD 354 Query: 268 HVPDYLL---YQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 ++ L Y G T V G C +GDI + GD ++ Sbjct: 355 NIRPALYGAEYDARVVSRFTEGETTNTRVVGSHCESGDILINEATYPSDIHTGDLLALAA 414 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N P + +R + +D + Sbjct: 415 TGAYCYAMSSRYNAFARPAVVSVRAGAAKLMLRRETLDDILS 456 >gi|219850262|ref|YP_002464695.1| diaminopimelate decarboxylase [Chloroflexus aggregans DSM 9485] gi|219544521|gb|ACL26259.1| diaminopimelate decarboxylase [Chloroflexus aggregans DSM 9485] Length = 444 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 64/397 (16%), Positives = 125/397 (31%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP YL+D+ L + ++ A K + + Q G S Sbjct: 34 GTPLYLLDEVTLRGAMRAYRQAFAATYPGPFRVHYAGKALLNTALAQIVAQEGLGLDVVS 93 Query: 60 LYEVMLGH-EKFG-GETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+++ H + A D E A+ I+ + + +L + + + +L + Sbjct: 94 ATELLVARRAGMPMAHVHLHGNAKSDAELERALTWQVGAIVVDNLDELARLRAMSARLAE 153 Query: 117 KIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNC 167 G LRI P++ ++ G E+ + + GL H Sbjct: 154 PQGVLLRIAPAIEADTHSHIATGGEAAKFGLPLAALDEAVAQTLAAPGLRWLGLHAHIGS 213 Query: 168 ENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLK 219 + + A ++ + F +S GGG+ + Q + Sbjct: 214 QLFALDQVVATVEVLVSQAARLRERFGVTPVELSPGGGLGVPYTADQPSTDRFRYAQVVS 273 Query: 220 EFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272 E + + L EPG +IV V + + + VD + ++ Sbjct: 274 EALQAACARYNLPLPRLTVEPGRSIVARAGVALYRV--VGRKGRRWLNVDGGMADNIRPA 331 Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 L + + N V GR C +GD+ P + GD I+ Y + Sbjct: 332 LYGARYSAVLANRAGEPAGEPVAVGGRYCESGDVLLREIALPPAQPGDLIAVATAGAYTL 391 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + R + +D Sbjct: 392 SMSSNYNLVPRPALVLVGNGRAHVIQRRETEDDVLAR 428 >gi|126436459|ref|YP_001072150.1| diaminopimelate decarboxylase [Mycobacterium sp. JLS] gi|126236259|gb|ABN99659.1| diaminopimelate decarboxylase [Mycobacterium sp. JLS] Length = 474 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 60/406 (14%), Positives = 122/406 (30%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + G + A K F + +++ +S E Sbjct: 64 GTPVFIIDEADFRSRCREISAAFGG-GEYVRYAAKAFLCTEVARWIDEEGLALDVASGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E A + D AV S ++ +++ ++ + + A + Sbjct: 123 LAVALHAGFPAERIALHGNNKSPDELALAVKSGVGHVVVDSMIEIERLDEIAAAAGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + E++ + GL H + Sbjct: 183 VLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMAAVRRVFETDNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + F + + LGGG+ + L Sbjct: 243 IFDVAGFELAAHRVIGLLRDVVAEFGVDKTAQMSTVDLGGGLGISYLPQDDPPPVADLAA 302 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 + ++ +EPG AI T V + + + V VD Sbjct: 303 KLSAIVREESAAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVAVASDRYRRYVSVDG 362 Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318 + ++ L E + + P + V G+ C +GDI + V GD + Sbjct: 363 GMSDNIRTSLYGAEYDVRLVSRVSDADPALSRVVGKHCESGDIVVRDAWLSGDVAPGDLL 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I P + +R + +D + Sbjct: 423 GVAATGAYCYSMSSRYNLIGRPAVVAVRDGHARLILRRETVDDLLS 468 >gi|108800861|ref|YP_641058.1| diaminopimelate decarboxylase [Mycobacterium sp. MCS] gi|119870001|ref|YP_939953.1| diaminopimelate decarboxylase [Mycobacterium sp. KMS] gi|108771280|gb|ABG10002.1| diaminopimelate decarboxylase [Mycobacterium sp. MCS] gi|119696090|gb|ABL93163.1| diaminopimelate decarboxylase [Mycobacterium sp. KMS] Length = 474 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 60/406 (14%), Positives = 122/406 (30%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + G + A K F + +++ +S E Sbjct: 64 GTPVFIIDEADFRSRCREISAAFGG-GEYVRYAAKAFLCTEVARWIDEEGLALDVASGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E A + D AV S ++ +++ ++ + + A + Sbjct: 123 LAVALHAGFPAERIALHGNNKSPDELALAVKSGVGHVVVDSMIEIERLDEIAAAAGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + E++ + GL H + Sbjct: 183 VLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMAAVRRVFETDNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + F + + LGGG+ + L Sbjct: 243 IFDVAGFELAAHRVIGLLRDVVAEFGVDKTAQMSTVDLGGGLGISYLPQDDPPPVADLAA 302 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 + ++ +EPG AI T V + + + V VD Sbjct: 303 KLSAIVREESAAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVAVASDRYRRYVSVDG 362 Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318 + ++ L E + + P + V G+ C +GDI + V GD + Sbjct: 363 GMSDNIRTSLYGAEYDVRLVSRVSDADPALSRVVGKHCESGDIVVRDAWLSGDVAPGDLL 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I P + +R + +D + Sbjct: 423 GVAATGAYCYSMSSRYNLIGRPAVVAVRDGHARLILRRETVDDLLS 468 >gi|33240555|ref|NP_875497.1| diaminopimelate decarboxylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238083|gb|AAQ00150.1| Diaminopimelate decarboxylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 455 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 52/397 (13%), Positives = 107/397 (26%), Gaps = 34/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ L + L A K ++ + + + G S Sbjct: 48 GTPLYILDELTLRTSCREYKDALSKYYPGDSIPLYASKANSSLIISNIVASEGMGVDVVS 107 Query: 60 LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115 E++ + + E+ N I+ + +++ ++ Sbjct: 108 EGELITALKGGVESSNIVFHGNNKSKSELIMAYKNDVIIVLDNQYDIDQLREIVPFGKRK 167 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168 K+ LR P + S+ G + + E + GL H + Sbjct: 168 AKLMLRFTPGIECHTHEYIKTGHIDSKFGFDPDELESIFLQFKDIEWGELIGLHAHIGSQ 227 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF---------CQ 216 + + + ++LGGG+ Sbjct: 228 IFEVQPHKDLADVMASALQTGRKLGHSLNALNLGGGLGIRYIASDDPPSISDWVEVIAAA 287 Query: 217 RLKEFSEKYSVQI--YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 +K E+ EPG +IV + + E VD + + Sbjct: 288 VVKACRERSLDLPLLMCEPGRSIVGSAGLTLYKIGSRKEIPGIKTYLSVDGGMSDNPRPI 347 Query: 273 LLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 E + + + G+ C +GD+ + GD + YN Sbjct: 348 TYQSEYSACLVDKPLIRADEVVTIAGKHCESGDVLLKDFRLPRSNSGDVLGVFSTGAYNF 407 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N I P + + + D N Sbjct: 408 SMSSNYNRIPKPAAIIVGNGESELIQKRELPEDLLRN 444 >gi|257065485|ref|YP_003145157.1| diaminopimelate decarboxylase [Slackia heliotrinireducens DSM 20476] gi|256793138|gb|ACV23808.1| diaminopimelate decarboxylase [Slackia heliotrinireducens DSM 20476] Length = 432 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 59/393 (15%), Positives = 117/393 (29%), Gaps = 29/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+ + N++ N G K A+K + + L +Y G SS Sbjct: 20 PTPFHLYDEAGIRKNMEAVRDAFAWNPGFKEYFAVKANPNPFIINILKEYGCGCDCSSFT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ G ++ + + F+ ++ + ++ + + + Sbjct: 80 ELMISEAVGITGHDIMFSSNDTPAEDFVLADKLGALVNFDDITHIEFYEQLTGHIPETVC 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-IKNVNGLMFH---------NNCEN 169 R NP + ++ G E+ + G Sbjct: 140 CRFNPGGLFEMANGIMDAPGDAKYGMTADQLREAFRMCKAKGAKHFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + I +I+L GG+ + + + E + + Sbjct: 200 YYPQLAGVLFQLAVDIARETDVHIAFINLSGGVGVAYSPDQEPNDIRAIGEGVRRVYDEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + K + VD++ + + Sbjct: 260 LVPAGMGDVAIYTEMGRFMLAPYGCLVTRAIHEKHTYKEYIGVDANAVNLIRPAMYGAYH 319 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F +++GD + D + + Sbjct: 320 HITVAGKEDAPCDHVYDVVGNLCENNDKFAVDRSLPEIEMGDLLVIHDAGAHGHAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DGT K IR +DY+ L Sbjct: 380 NGRLKSAEVLLQTDGTPKLIRRAERPSDYFATL 412 >gi|227487947|ref|ZP_03918263.1| diaminopimelate decarboxylase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092038|gb|EEI27350.1| diaminopimelate decarboxylase [Corynebacterium glucuronolyticum ATCC 51867] Length = 463 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 60/403 (14%), Positives = 118/403 (29%), Gaps = 42/403 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + + A K F + +N +SL E Sbjct: 61 GTPLFVVDEDDFRSRCQAMAAAFGAEN--VHYAAKAFLTKAIARWVNDEGLHLDVASLGE 118 Query: 63 VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F E + K V S T++ + ++ D+A Sbjct: 119 LQVALATGFPAERITAHGNNKTVAYMDKVVSSGVGTVVLDAPGEIGLLNDRAALAGVTQN 178 Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168 + + P + + + G C+ +++ ++ GL H + Sbjct: 179 VMVRVKPGIEAHTHEMIATAHEDQKFGFSLASGSAYAACEKALDAVHLDLVGLHCHVGSQ 238 Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF--------CQ 216 FS + + F + + LGGG + Sbjct: 239 VFDAEGFSQAAERVLTLFVKLHDERRVTLTTLDLGGGFGIAYTAHSRPLRVEDVAEDLIA 298 Query: 217 RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267 R++ EK + +I +EPG +I TT V + + + Sbjct: 299 RVQRRCEKLNLDVPRIMVEPGRSIAGPTTVTVYEVGQVKDVHVTDTQTRRYVAVDGGMSD 358 Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFED 322 ++ L E N P V G C +GDI + + V GD ++ Sbjct: 359 NLRPALYQAEYDLRLVNRSASGAPIPTRVVGSHCESGDILITNEAYPEDVATGDLVATAA 418 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +N + P + ++ + D N Sbjct: 419 TGAYCYAMSSRYNMMLRPAVVSVKDGKARLMVKRETIEDVLEN 461 >gi|290968322|ref|ZP_06559864.1| putative diaminopimelate decarboxylase [Megasphaera genomosp. type_1 str. 28L] gi|290781681|gb|EFD94267.1| putative diaminopimelate decarboxylase [Megasphaera genomosp. type_1 str. 28L] Length = 417 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 114/393 (29%), Gaps = 30/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D+Q +++N+ L K A+K + L G SS+ Sbjct: 21 PTPFHIYDEQAMIDNVRQFLRAFSWAPSFKEYFAVKATPNPYIMKLLKAEGVGADCSSMA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML G ++ I + +S + + A + Sbjct: 81 ELMLCEKVGITGRDIVFSSNDTPYAEYQKALAMGALINLDDISMIAYLEQHASLPERICA 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKS---- 171 R NP + ++ G + E+ K V H + Sbjct: 141 -RYNPGPLLQEGNAIIGKPEEAKYGMTREQIFEAFRILQAKGVRHFGLHTMVVSNELAVQ 199 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 M + H +E+I GGGI + L + ++ I Sbjct: 200 GLIHTAKMMFELAADVQKHTGITVEFIDFGGGIGLPYRPEESFVSYDELSQGIRQHFETI 259 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E G AI L TT + K + VD+ + + + Sbjct: 260 MKPHGLGQVQLAFECGRAITGPYGYLVTTAIHHKHIWKEYIGVDACMANLMRPGMYGAYH 319 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + G C D F ++ GD + D + + + Sbjct: 320 HISVMGKEHLPKDHIYDISGSLCENCDKFAVDRALPEIEDGDILVIHDTGAHGHSMGFNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG ++ IR + D + L Sbjct: 380 NGKLRSAELLLQKDGKVRQIRRAETLEDLFATL 412 >gi|268593090|ref|ZP_06127311.1| diaminopimelate decarboxylase [Providencia rettgeri DSM 1131] gi|291311359|gb|EFE51812.1| diaminopimelate decarboxylase [Providencia rettgeri DSM 1131] Length = 419 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P ++ D ++ + + + A K + + + Q S SL E Sbjct: 25 GSPVWVYDSAVIIERIKQLQ-VFD----TVRFAQKACSNIHILRLMKQQGVKVDSVSLGE 79 Query: 63 VMLGH-EKFGGET----HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + F + D A ++ D + ++ L + + QK Sbjct: 80 IERALVAGFQPGRENSEIVFTADVLDRATLAKVTELDIPVNAGSIDMLEQIGE--QKAGH 137 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 + LRINP + + S+ G +D I ++ G+ H Sbjct: 138 PVWLRINPGFGHGHSQKTNTGGENSKHGIWHEDLSLALEKIRHYNLSLVGIHMHIGSGVD 197 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224 + + + ++ + IS GGG+ ++ Q + Sbjct: 198 -YQHLADVCDSMVALVTTAGVDLHAISAGGGLSTPYREGDELIDVQHYYSLWDNARQRIE 256 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279 + +++ +EPG +V + L V + ++ V+VDS + + Sbjct: 257 QHLGHKIELEIEPGRYLVAESGVLLAEVRAVKDMGSRHYVLVDSGFNDLMRPAMYGSYHH 316 Query: 280 TIYPNTGPYTAM--------VCGRSCLAGDIFGE-------FHFEKPVKIGDRISFEDVA 324 T V G C +GD+F + VK+GD + F D Sbjct: 317 ISVLPTDGRNVDGAQLKDTIVAGPLCESGDVFTQLEGGLVVTRALPEVKVGDFLVFHDTG 376 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + R + + Sbjct: 377 AYGASMSSNYNSRPLLPEVMFVNGKPQLIRRRQTIEELLA 416 >gi|149919596|ref|ZP_01908075.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Plesiocystis pacifica SIR-1] gi|149819539|gb|EDM78967.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Plesiocystis pacifica SIR-1] Length = 430 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 57/395 (14%), Positives = 123/395 (31%), Gaps = 36/395 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D+ + A + + A K F + + ++ +S E Sbjct: 36 GTPLFVHDEDHIRARCRQAREAFPDG---VAYASKAFLCRAIAELAHEEGMHIDVASGGE 92 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 + L + + K ++ ++ +L++ + + + Sbjct: 93 MHLALQAGVPADRLVLHGNNKSTAELRYALEQRVHRVVVDSFDELDRIEALVAEGLPAPR 152 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + LRI P V + + S+ G + S + GL H + Sbjct: 153 VLLRITPGVKANTHEFIQTGQDDSKFGFGVRVGHADRAIERAAASPAIELVGLHAHVGSQ 212 Query: 169 NKSFLCFSAMLKNIEKEFGHF------ITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEF 221 F + + + F F ++E + +GGG+ + + + Sbjct: 213 VFEVGSFEKVAEVLAGIFARFQAKTGPNARMEELCIGGGLGVAYVEGEADCGIVEWGQAV 272 Query: 222 SEKYSVQIY-----LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL 274 + EPG +I+ ++ TV I + V + + L Sbjct: 273 RRACAAAGISAKITAEPGRSIIASSAITLYTVGTIKDIPGVRTYVSVDGGMSDNPRPVLY 332 Query: 275 YQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329 T P P T + G+ C +GD+ +++GD IS Y + Sbjct: 333 GSGYETFLPRATDADRPKTIRLVGKHCESGDLLVREGLVPADIRVGDIISTPVTGAYGYS 392 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + P + + IR +++D Sbjct: 393 LGSNYNKVPRPAVVFVKDGQARQVIRRETWDDLLR 427 >gi|288906000|ref|YP_003431222.1| diaminopimelate decarboxylase [Streptococcus gallolyticus UCN34] gi|288732726|emb|CBI14300.1| diaminopimelate decarboxylase [Streptococcus gallolyticus UCN34] Length = 414 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 121/388 (31%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 19 PTPFHLYDEKGIREKARALNEAFAWNKGFKEYFAVKATPTPAILKILQEENCGVDCATEV 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+++ H+ + + E TI + + K+ A + LR Sbjct: 79 ELLMSHKLGFTDIMFSSNDTPAREFRYAKEIGATINLDAYEHIAFLKEVAGLPET-VSLR 137 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN----KS 171 NP ++ N S+ G I+ + + V G+ Sbjct: 138 YNPGGVFALGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKNFGIHSFLASNTVTNDYY 197 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--- 228 + + + + +I+L GG+ + + + + + + Sbjct: 198 PELARQLFELAVEVKEKTGVAVSFINLSGGVGVNYRPEQEPNDIAVIGKGVHRVFDEVLI 257 Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 I+ E G ++ + L T V + + + VD+S + + Sbjct: 258 PAGLGDVKIFTELGRFMLASHGLLVTKVRHRKQTYRTYIGVDASAVNLMRPAMYDAYHHI 317 Query: 281 IY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 PN V G C D F + ++GD + D + + +NG Sbjct: 318 TNVSNPNGKLEVVDVVGSLCENNDKFAKQRELPEARVGDTLVIHDTGAHGFSMGYQYNGR 377 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + DG+ + IR + DY+ Sbjct: 378 LRSAEILYQEDGSARLIRRAETPEDYFA 405 >gi|331085004|ref|ZP_08334091.1| hypothetical protein HMPREF0987_00394 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408704|gb|EGG88169.1| hypothetical protein HMPREF0987_00394 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 423 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 62/393 (15%), Positives = 121/393 (30%), Gaps = 29/393 (7%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP+++ D++ + N+ N G K A+K + L +Y G SS Sbjct: 18 VYPTPFHIYDERGIRENVRALKEAFSWNKGYKEYFAVKATPNPFLIQILREYGCGCDCSS 77 Query: 60 LYEVML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+M+ G + + A E I + + ++ + + + Sbjct: 78 YTELMMSEAIGAVGEDIMFSSNATPAEEFVYADKLGGIINLDDFTHIDFLEKAIGHIPET 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNC 167 I R NP + N ++ G + ++ + ++ L + Sbjct: 138 ISCRYNPGGLFQISNDIMDNPGDAKYGMTTEQLFDAFRILKEKGAKHFGIHAFLASNTVT 197 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + + K I++I+L GGI + + + E K Sbjct: 198 NEYYPMLAKVLFEVAVKLQKETGVHIKFINLSGGIGIPYRPDQEPNDIHAIGEGVRKVYE 257 Query: 228 Q-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276 + IY E G ++ L T + K + D+ + + Sbjct: 258 EVLVPAGMGDVAIYTELGRFMMGPYGALVTRAIHEKHTHKEYIGCDACAVNLMRPAMYGA 317 Query: 277 ESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + V G C D F + IGD + D + Sbjct: 318 YHHITVMGKEDAPCDHKYDVTGSLCENNDKFAIDRMLPKIDIGDLLYIHDTGAHGFAMGY 377 Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 +NG + DG+++ IR + DYY Sbjct: 378 NYNGKLKSAELLLKEDGSVQMIRRAETPADYYA 410 >gi|270264865|ref|ZP_06193129.1| hypothetical protein SOD_j00800 [Serratia odorifera 4Rx13] gi|270041163|gb|EFA14263.1| hypothetical protein SOD_j00800 [Serratia odorifera 4Rx13] Length = 420 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 54/398 (13%), Positives = 118/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + + + A K + + + + S SL E+ Sbjct: 27 PVWAYDAAIISERISQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + ++ L++ + + + Sbjct: 82 RALQAGFQPGGEPSDIVFTADVLDHATLARVSELKIPVNVGSIDMLDQLGQVS--VGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G D I+ + G+ H + Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQAVEKIQQYGLKLIGVHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK---- 224 + + ++ I IS GGG+ + + + E+ Sbjct: 199 QHLERVCDAMVQQVIDLGHDISAISAGGGLSIPYQYGEEAIDTEHYFGLWNSARERIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V + +EPG ++ L V + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 282 Y--------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + ++ G C +GD+F E PV++GD + F D Y Sbjct: 319 LLPADGRNTEHQPLRDTVIAGPLCESGDVFTQQAGGGIETRELPPVQVGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFEKGEPRLIRRRQTIEELIA 416 >gi|26988802|ref|NP_744227.1| diaminopimelate decarboxylase [Pseudomonas putida KT2440] gi|24983601|gb|AAN67691.1|AE016399_8 diaminopimelate decarboxylase [Pseudomonas putida KT2440] Length = 410 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 51/398 (12%), Positives = 131/398 (32%), Gaps = 44/398 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P + D + + + ++ + + A K + + + + SL E Sbjct: 16 GSPLWAYDTRTIADRVEQL-NVFD----TVRFAQKANPNLHVLRLMRAHGLVLDAVSLGE 70 Query: 63 VMLGHE------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + A ++ V+++ + ++ L++ +++ Sbjct: 71 MERAFAAGASVDGDPAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLHQLGERS--PGH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 ++ +RINP + + S+ G ++ I++ ++ G+ H Sbjct: 129 RVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHGLHLVGVHMHIGSGVD 188 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224 + + +++ + G IE S+GGG+ K ++ + Q ++ Sbjct: 189 -YQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRSTDKPVDLQRYAQTWAVARKEIE 247 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA 279 + V++ +EPG +V + L V + + VI+D+ + + Sbjct: 248 AMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVIIDAGFNDLMRPAMYGAYHG 307 Query: 280 TIY-------PNTGPYTAMVCGRSCLAGDIFGEF------HFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F + ++GD + D Y Sbjct: 308 MTLLDADGQAVDRPRQPTVVAGPLCESGDVFTQDDQALTPQDLPQAQVGDLLVIHDAGAY 367 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + D + Sbjct: 368 GASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLS 405 >gi|284928894|ref|YP_003421416.1| diaminopimelate decarboxylase [cyanobacterium UCYN-A] gi|284809353|gb|ADB95058.1| diaminopimelate decarboxylase [cyanobacterium UCYN-A] Length = 478 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 58/405 (14%), Positives = 125/405 (30%), Gaps = 43/405 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D++ L + K +++ A K ++ + + G S Sbjct: 60 GSPLYILDEKTLRTSCKQYRDNFKLYYKGSSQVIYASKAWSCLSVVGIIATENLGFDVVS 119 Query: 60 LYE---VMLGHEKFGGETH-------AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 E V + K G + E++ + I+ + +L + Sbjct: 120 GGEFHTVQIAMSKLGYSEIEIANRVYFHGNNKSLDELELAIKANCNIVVDNWLELQNLVE 179 Query: 110 KAQKLHK---KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVN 159 L + +I LR+ P + S+ G D I+ ++ N Sbjct: 180 LGSCLPEKSIRILLRLTPGIECHTHEYIKTGHVNSKFGFNLNDFETVINYVIKQKVLNCR 239 Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQ 216 GL H + + + K + +++GGG+ + + Sbjct: 240 GLHSHIGSQIFEKQPHRDLAFILVKLLKKSQELGLTLSELNIGGGLGISYTSDDNPPSIE 299 Query: 217 RLKEFSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDS 263 + + ++ + EPG +++ + TV E +D Sbjct: 300 EWVKNVSESVMEACLDSNLSFPKLIAEPGRSLIGSAGVTAYTVGSRKEIPGLHTYLAIDG 359 Query: 264 SVEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + + + + N T ++ G+ C +GDI + GD + Sbjct: 360 GMSDNPRPITYQSLYSILIGNKMSEKITETFIIAGKHCESGDIIIKDAQLPQTHTGDILV 419 Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N I P + N +R +Y+D Sbjct: 420 VMGTGAYNYSMASNYNRIPRPAAVLVNHGEANLIVRRETYDDLVK 464 >gi|327490088|gb|EGF21876.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1058] Length = 416 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 117/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKESAGIPKIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169 V + D ++ G I++ + G+ Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHAFLASNTVIND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRALPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409 >gi|40062569|gb|AAR37506.1| diaminopimelate decarboxylase [uncultured marine bacterium 159] Length = 418 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 71/394 (18%), Positives = 124/394 (31%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYM--DGTTSS 58 TP Y + + NNLD + ++ A+K + ++QY+ G S Sbjct: 24 GTPLYTYFGEIICNNLDRIDTALRANFDKYQIYFAVKSNNNPNLLAFMHQYLPTLGADCS 83 Query: 59 SLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 S E+++ + + Y Y+ + N I + + + K+ + + Sbjct: 84 SPGELVVAERAEIPMKNCVYTGNYESMDDLQSAVNSGCEINLDDETSFIRLKNI--GIPE 141 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENK 170 I R+NP V +F ++ G + + GL H+ Sbjct: 142 YISFRLNPGVGKGRFAEIVTGGREAKFGIPVEKIAAVYKSALADGVKTFGLQCHSGSAIL 201 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKDF--------CQRL 218 F + I K H I+ IS+G G D + Sbjct: 202 DQNHFRENTELILKTARHIEDAIDHRLLKISIGSGFGIPYADDEDPLNFNDVFGLVAEIF 261 Query: 219 KEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275 KEF ++ +EPG A+V + L V I ++ K + +D+ +E + L Sbjct: 262 KEFYGQHQHDWPVLCIEPGRALVGDAAILLAQVTGIKDSYKTFIGLDAGMETLMRPALYG 321 Query: 276 Q----ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 T + GR C D V GD I+ D Y Sbjct: 322 AVHRIYKVGALMEEQNLTVDITGRICENTDRLAIDIPFPDVAEGDLIAIMDTGAYGYAMA 381 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + FN P + + D + D + Sbjct: 382 HQFNTRPRPAEVLIDKDKPHLIRSRETVEDIFRK 415 >gi|256826621|ref|YP_003150580.1| diaminopimelate decarboxylase [Cryptobacterium curtum DSM 15641] gi|256582764|gb|ACU93898.1| diaminopimelate decarboxylase [Cryptobacterium curtum DSM 15641] Length = 452 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 53/399 (13%), Positives = 116/399 (29%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 T Y+ D++ L + +++ A K F M + S Sbjct: 50 GTALYVYDEEDLRERMRAYRSSFNRLHPNSEVIYASKAFLNKAMARIAAEEGMSLDVSGG 109 Query: 61 YEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + F + + + +A+ + I+ ++ +L + A + Sbjct: 110 GELAIARAAGFPADRVYVHGNNKTPEELEEAITAGVKCIVIDSRIELARVSQIAERHGIT 169 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 + + +RI P V S+ G D + + + G+ H Sbjct: 170 QDVFMRITPGVEADTHEYIRTGMEDSKFGFTMRDDFAFKCIDDVLAASHVRLAGIHMHIG 229 Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + + + + + I+ + +GGG+ + + Sbjct: 230 SQIFALHSYREAVAVAVDFIARIKKTYDYTIDVLDVGGGVGIAYQASDQPASIEEFATLV 289 Query: 219 ---------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269 K E + A + T +L I+ V VD + ++ Sbjct: 290 CESVDEECAKAGIENLRILCEPGRSIAAIPGVTLYTVGILKTLPGIRKYVAVDGGMSDNI 349 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + + N +CG+ C +GD + ++GD + Sbjct: 350 RTALYHADFEAVLANKADQPRTEVVTLCGKHCESGDAVVLDGSLQHPELGDIVCVFGTGA 409 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +NG P + R +Y D Sbjct: 410 YCQSMSSNYNGQVRPAVVFVRDGVARVVTRRQTYADLVA 448 >gi|254173501|ref|ZP_04880173.1| diaminopimelate decarboxylase [Thermococcus sp. AM4] gi|214032193|gb|EEB73023.1| diaminopimelate decarboxylase [Thermococcus sp. AM4] Length = 412 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 81/379 (21%), Positives = 133/379 (35%), Gaps = 37/379 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y+ + ++ +N K AG + + A+K + + + G ++S Sbjct: 31 GTPVYIYNLSRIRDNYLRMADALKKAGFREWRIHYAMKANNNKEVLGLIRELGGGIDATS 90 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 EV L E F E + I F++VS L +F + +K Sbjct: 91 PGEVKLAREIGFKDEDIIFTGTSLSNGDLEFLAKTNVLINFDSVSSLRRFNG---EEGRK 147 Query: 118 IGLRINPSVSYSKFILADPNRPFS-----RLGEK------CKDKIESEIKNVNGLMFHNN 166 +GLRIN V + + G D IE + ++ L H Sbjct: 148 VGLRINTGVGIGRVEKTTTGGLEVGSIPVKFGISGKAIDRAFDLIEEKGLELHCLHHHVG 207 Query: 167 CEN------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQ 216 + + F +LK EK F ++ I LGGG +++PV +F Q Sbjct: 208 SDWVGEKIARYFQALDNLLKVAEKAEARFGGSLKVIDLGGGYGVPHSAEEEEFPVYEFFQ 267 Query: 217 RLKEFSEKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273 R+KE E+Y ++ +EPG +V++ L V + E + + + Sbjct: 268 RVKEHMEEYGFGDLKVIVEPGTYLVSDAGILVAQVNTVEEKNGRIFVGVDAGLNVFNSPA 327 Query: 274 LYQESATIYPN-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 LY I A V G C +GDIF ++ GD I+ + Y Sbjct: 328 LYNYYHEIVVCNRVSSEEKMVATVVGNICESGDIFAVDRELPKIEEGDYIAILNAGAYGY 387 Query: 329 NRKNWFNGINMPTIAVKNV 347 N +N V Sbjct: 388 VMANNYNLRPKGKEVVVGG 406 >gi|67922226|ref|ZP_00515740.1| Diaminopimelate decarboxylase [Crocosphaera watsonii WH 8501] gi|67855929|gb|EAM51174.1| Diaminopimelate decarboxylase [Crocosphaera watsonii WH 8501] Length = 474 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 52/404 (12%), Positives = 119/404 (29%), Gaps = 43/404 (10%) Query: 4 TPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P Y++D+ L K +++ A K +++ + + G S Sbjct: 61 SPLYILDETTLRTACHQYRDGFKTYYQGESQVIYASKAWSSLAVVGVIATENLGFDVVSG 120 Query: 61 YEV---MLGH-------EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 E+ ++ + + + E++ L TII + +L Sbjct: 121 GELYTTQKALTQLGYSCQEIAQKIYFHGNNKSVAELEQALEMGCTIIVDNWLELQTLVQL 180 Query: 111 ---AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNG 160 I +R+ P + S+ G E + + G Sbjct: 181 GETIPNQKTPILIRLTPGIECHTHEYIRTGHLDSKFGFDPNQLETVFSYIAEQKSLDCRG 240 Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 L H + + + + + + +++GGG+ + + Sbjct: 241 LHAHIGSQIFERQPHQDLAGVLVEWLKIGQEYGLTLSELNIGGGLGIRYTEDDDPPSIEE 300 Query: 218 LKEFSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS-- 264 + + + ++ + EPG +++ + TV E V Sbjct: 301 WIKAASEAVMKACQRSGIPLPKLIAEPGRSLIGSACVTAYTVGSSKEIPDIRTYVAVDGG 360 Query: 265 VEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + + + + N T V G+ C +GDI + GD + Sbjct: 361 MSDNPRPITYQSSYSVVLGNKMSAEINETVTVAGKHCESGDIVIKDAQLPQTHPGDILVI 420 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + P + N ++ +Y+D Sbjct: 421 MGTGAYNYSMASNYNRLPRPAAVLVNNGEANLILKRETYDDLIR 464 >gi|71907276|ref|YP_284863.1| diaminopimelate decarboxylase [Dechloromonas aromatica RCB] gi|71846897|gb|AAZ46393.1| diaminopimelate decarboxylase [Dechloromonas aromatica RCB] Length = 416 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 56/403 (13%), Positives = 117/403 (29%), Gaps = 48/403 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + V + A K + + + + S SL E Sbjct: 17 GTPLWIYDADTITRQIAALR----LFDV-VRFAQKANSNTHILRLMKRQGAVVDSVSLGE 71 Query: 63 VMLGHEKF-------GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL 114 + G + D A + + + ++ L++ A Sbjct: 72 IERALAGGFTPGLHNGDADIVFTADLLDRATLARVVELNIPVNCGSMDMLDQLG--AVNP 129 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCE 168 + LRINP + + S+ G D + + K + GL H Sbjct: 130 GHPVWLRINPGFGHGHSKKTNTGGEHSKHGIWHGDLVRACEKIKANGLALQGLHMHIGSG 189 Query: 169 NKSFLCFSAMLKNIE--KEFGHFITQIEWISLGGGIHFTDKD-YPVKDFCQRLKEF---- 221 ++ + + IS GGG+ + P D + Sbjct: 190 VDYAHLQEVCGAMLKLVEVVNAQGLDLHAISAGGGLSVPYQAGEPTIDTAHYFSLWDAVR 249 Query: 222 -----SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLY 275 ++ V++ +EPG ++ + L T V + N ++ + V L Sbjct: 250 HAVEQLLEHPVKLEIEPGRYLMAESGVLVTEVRATKQQGANHFVMVDAGFSDLVRPALYG 309 Query: 276 QESATIYPNTG-------PYTAMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFE 321 ++ + +V G C +GD+F + ++GD + Sbjct: 310 AYHGMELIHSDGTAVNGLQFDTVVAGPLCESGDVFTQGDGGVLLHRSLPQAQVGDLLVLH 369 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 D Y + + +N + + R + + Sbjct: 370 DTGAYGASMSSNYNARPLIAEVLMENGEPRLIRRRQTVAELLA 412 >gi|328946843|gb|EGG40980.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1087] Length = 416 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 120/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGVRERARALHKAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169 V + D ++ G I++ + G+ + + Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAIIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P+ V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRPDGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409 >gi|288550358|ref|ZP_05970120.2| diaminopimelate decarboxylase [Enterobacter cancerogenus ATCC 35316] gi|288315601|gb|EFC54539.1| diaminopimelate decarboxylase [Enterobacter cancerogenus ATCC 35316] Length = 431 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 117/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 38 PVWVYDAQIIREKIAALHQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 92 Query: 65 LGHE-KFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 F + + D A + + +V L + + ++ Sbjct: 93 RALAAGFDPQSDSDAIVFTADLIDDATLARVHELHIPVNAGSVDMLEQLGQVS--PGHRV 150 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G + ++ + G+ H Sbjct: 151 WLRVNPGFGHGHSQKTNTGGENSKHGIWHGDLPAALEVLQRYGLKLVGIHMHIGSGVDYG 210 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 +++ +E IS GGG+ Y R K + Sbjct: 211 HLEQVCGAMVDQVLA-CGQDLEAISAGGGLSIPYREGEEAIDTDHYYGLWSAARDKIAAH 269 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 ++V++ +EPG +V + L V + ++ V++D+ + + Sbjct: 270 LGHAVKLEIEPGRFLVAESGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPSMYGSYHHIT 329 Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E VK GD + D Y Sbjct: 330 ALAADGRDLLNAPRVETVVAGPLCESGDVFTQQEGGKVETRTLPEVKPGDYLVLHDTGAY 389 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 390 GASMSSNYNSRPLLPEVLFDRGVARLIRRRQTIQELLA 427 >gi|60682355|ref|YP_212499.1| putative diaminopimelate decarboxylase [Bacteroides fragilis NCTC 9343] gi|60493789|emb|CAH08579.1| putative diaminopimelate decarboxylase [Bacteroides fragilis NCTC 9343] Length = 387 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 66/370 (17%), Positives = 123/370 (33%), Gaps = 27/370 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+Y D + L + L + + + A+K A + + + G S Sbjct: 13 LPTPFYYYDTKVLRDTLACVNREVARYDNFSVHYAVKANANPKVLTIIRESGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + K + + D FN +V +L + A + Sbjct: 73 GEIRAAIKAGFPAGKIVFAGVGKADWEIDLGLDYDIFCFNVESVPELEVINELAAAKGKV 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP+V ++ G D +E + GL FH + Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMHDMDKVIDVALELKHVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222 F+ + ++ + +E I++GGG+ P+ DF + + Sbjct: 193 ILDMGDFIALCNRVNELQDKLEARHILVEHINVGGGLGIDYDHPNRQPIPDFADYFRTYD 252 Query: 223 EKY----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 E ++ E G AI +L + VL + + + D+ + + L Sbjct: 253 EHLKLRPHQTLHFELGRAITGQCGSLISKVLYVKQGTNKQFAILDAGMTDLIRPALYQAH 312 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + T V G C + D+FG+ VK GD I+ Y + + Sbjct: 313 HKMENLTSQDPVVETYDVVGPICESSDVFGKAVDLNKVKRGDLIALRSAGAYGEIMASGY 372 Query: 335 NGINMPTIAV 344 N +P + Sbjct: 373 NCRELPKGYI 382 >gi|296104501|ref|YP_003614647.1| diaminopimelate decarboxylase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058960|gb|ADF63698.1| diaminopimelate decarboxylase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 420 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 118/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIVREKIAALHQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A + + +V L + + ++ Sbjct: 82 RALAAGFDPKTDPDAIVFTADLIDDATLARVHELQIPVNAGSVDMLEQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G + ++ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYADMPAALEVLQRYNLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + ++ F +E IS GGG+ Y R K + Sbjct: 199 GHLEQVCGAMVRQVIDFGQDLEAISAGGGLSIPYREGEEAIDTDHYYGLWSAARDKVAAH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L V + ++ V++D+ + + Sbjct: 259 VGHPVKLEIEPGRFLVAESGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPSMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRDLTDAPRIDTVVAGPLCESGDVFTQHEGGKVETRALPEVKPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGKARLIRRRQTIQELLA 416 >gi|171780260|ref|ZP_02921164.1| hypothetical protein STRINF_02048 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281608|gb|EDT47043.1| hypothetical protein STRINF_02048 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 413 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 118/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 19 PTPFHLYDEKGIREKARALNKAFAWNKGFKEYFAVKATPTPAILKILQEENCGVDCATEV 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+++ H+ + + E TI + + K+ A + LR Sbjct: 79 ELLMSHKLGFTDIMFSSNNTPAREFKYAREIGATINLDAYEHIAFLKEVAGLPDT-VSLR 137 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN----KS 171 NP +S N S+ G I+ + + V G+ Sbjct: 138 YNPGGVFSLGTDIMDNPEESKFGMTKDQLIQGFKDLKAEGVKNFGIHSFLASNTVTNDYY 197 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--- 228 + + + I +I+L GG+ + + + E + + Sbjct: 198 PELARQLFELAVEVKEKTGVMINFINLSGGVGVNYRPEQKANDIAVIGEGVHRVFDEVLV 257 Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 PGGLGDVKIFTELGRFMLAPHGLLVTKVRHRKQTYRTYIGVDASAVNLLRPAMYDAYHHI 317 Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 V G C D F + +IGD + D + + +NG Sbjct: 318 TNMTNSNGKLEVVDVVGSLCENNDKFAKQRELPEARIGDTLVIHDTGAHGFSMGYQYNGR 377 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + DG+ + IR + DY+ Sbjct: 378 LRSAEILYQEDGSARLIRRAETPEDYFA 405 >gi|332358336|gb|EGJ36162.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK355] Length = 416 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 120/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHKAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169 V + D ++ G I++ + G+ + + Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPDGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGEVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P+ V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRPDGETEIVDVVGSLCENNDKFAINRSLPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409 >gi|53714337|ref|YP_100329.1| diaminopimelate decarboxylase [Bacteroides fragilis YCH46] gi|253564815|ref|ZP_04842271.1| diaminopimelate decarboxylase [Bacteroides sp. 3_2_5] gi|265766209|ref|ZP_06094250.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_16] gi|52217202|dbj|BAD49795.1| diaminopimelate decarboxylase [Bacteroides fragilis YCH46] gi|251946280|gb|EES86657.1| diaminopimelate decarboxylase [Bacteroides sp. 3_2_5] gi|263253877|gb|EEZ25342.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_16] gi|301163826|emb|CBW23381.1| putative diaminopimelate decarboxylase [Bacteroides fragilis 638R] Length = 387 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 66/370 (17%), Positives = 123/370 (33%), Gaps = 27/370 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+Y D + L + L + + + A+K A + + + G S Sbjct: 13 LPTPFYYYDTKVLRDTLACVNREVARYDNFSVHYAVKANANPKVLTIIRESGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + K + + D FN +V +L + A + Sbjct: 73 GEIRAAIKAGFPAGKIVFAGVGKADWEIDLGLDYDIFCFNVESVPELEVINELAAAKGKV 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP+V ++ G D +E + GL FH + Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMHDMDKVIDVALELKHVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222 F+ + ++ + +E I++GGG+ P+ DF + + Sbjct: 193 ILDMGDFIALCNRVNELQDKLEARHILVEHINVGGGLGIDYDHPNRQPIPDFADYFRTYD 252 Query: 223 EKY----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 E ++ E G AI +L + VL + + + D+ + + L Sbjct: 253 EHLKLRPHQTLHFELGRAITGQCGSLISKVLYVKQGTNKQFAILDAGMTDLIRPALYQAH 312 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + T V G C + D+FG+ VK GD I+ Y + + Sbjct: 313 HKMENLTSEDPVVETYDVVGPICESSDVFGKAVDLNKVKRGDLIALRSAGAYGEIMASGY 372 Query: 335 NGINMPTIAV 344 N +P + Sbjct: 373 NCRELPKGYI 382 >gi|257784319|ref|YP_003179536.1| Diaminopimelate decarboxylase [Atopobium parvulum DSM 20469] gi|257472826|gb|ACV50945.1| Diaminopimelate decarboxylase [Atopobium parvulum DSM 20469] Length = 434 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 66/395 (16%), Positives = 120/395 (30%), Gaps = 31/395 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L +K +++ N G K A+K + L + G ++ Sbjct: 20 PTPFHLYNKAEIVRRAKLLQEAFSWNTGFKEYFAVKATPNPYIVKLLAELGCGCDCANAT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNT--VSQLNKFKDKAQKLHKK 117 E+ L G+ + + I + + + Sbjct: 80 ELTLAKACGVTGQNIMLSSNDTTVLDFARAHELGAIINLDAGGDMLTTLEDAVGSTMPQV 139 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVN--GLMFHNNCENKS 171 + R+NP + N ++ G + + K V GL + Sbjct: 140 MCARLNPGGVFESQNGIIGNPDDAKFGMTEEQLFQTFAYLKTKGVTEFGLHAFLASNAQE 199 Query: 172 FLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSE 223 + + + K I +I L GGI + V Q +K E Sbjct: 200 EDYYPNLARVLFELAVKLHRELDIHIGFIDLSGGIGVAYEPNQVEPDVLAIGQGVKCAFE 259 Query: 224 KY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276 + V IY E G ++ L T VL E ++ + VD+ + + Sbjct: 260 EVLVPAGMGDVSIYTELGRWLLGPAGALVTRVLHQKETYRHYLGVDACAANLMRPAIYDA 319 Query: 277 ESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 +T V G C D F + V +GD + D + + Sbjct: 320 YHHITVMGKEDAPATHTYNVVGGLCENNDQFAKNRQLPKVAVGDLLFIHDTGAHGFSMGY 379 Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 +NG + DG+++ IR + DY+ L Sbjct: 380 NYNGRLRSAELLLLEDGSVQLIRRAETEADYFATL 414 >gi|183984075|ref|YP_001852366.1| diaminopimelate decarboxylase LysA [Mycobacterium marinum M] gi|183177401|gb|ACC42511.1| diaminopimelate decarboxylase LysA [Mycobacterium marinum M] Length = 472 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 58/406 (14%), Positives = 120/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + G + A K F + +N+ S+ E Sbjct: 64 GTPLFVIDEDDFRSRCQEIAAAFGG-GHNVNYAAKAFLCSEIARWVNEEGLSIDVSTGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F E + K AV + I+ +++ ++ + A + Sbjct: 123 LAVALHANFPPERITLHGNNKSVAELTTAVKAGVGHIVLDSMIEIERLDAIAGEAGIVQD 182 Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + + V + G + ++ + GL H + Sbjct: 183 VFVRLTVGVEAHTHEFISTAHEDQKFGLSISSGAAMAAVRRVFATDHLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ--------IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + + + + LGGG+ + L + Sbjct: 243 IFDVDGFELAAHRVIGLLREVVAEFGSEKTAQLATVDLGGGLGISYLSSDDPPPVGELAD 302 Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 ++ +EPG AI T V + + + V VD Sbjct: 303 KLGAIVSNESAAVGLPAPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATANRRYVSVDG 362 Query: 264 SVEAHVPDYLL---YQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L Y + P T A V G+ C +GDI + ++ GD + Sbjct: 363 GMSDNIRTALYDAQYDVRLVSRVSDAPATLARVVGKHCESGDIIVRDTWVPDDLQPGDLV 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N I P + +R + +D + Sbjct: 423 AVAATGAYCYSLSSRYNMIGRPAVVAVRAGKARLVLRRETVDDLLS 468 >gi|160893389|ref|ZP_02074175.1| hypothetical protein CLOL250_00939 [Clostridium sp. L2-50] gi|156864964|gb|EDO58395.1| hypothetical protein CLOL250_00939 [Clostridium sp. L2-50] Length = 421 Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 66/393 (16%), Positives = 121/393 (30%), Gaps = 30/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G K A+K + L + GT SSL Sbjct: 19 PTPFHLYDEKGIRENARKLYQAFSWNKGFKEFFAVKATPNPTILRILKEEGCGTACSSLT 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ + F G+ ++ E TI + + ++ + A K Sbjct: 79 ELMMSDKLGFTGDEIMFSSNDTPAEEFVLAKKLGATINLDDFTHIDFLEKTAGIPEKICC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCEN 169 + D ++ G IE+ K V H + Sbjct: 139 RYNPGGTFSISTTIMDNPG-DAKYGMTKDQIIEAYRILKGKGVKRFGMHAFLASNTVTND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + + ++++I+L GG+ + + E K +I Sbjct: 198 YYPVLARTLFEVAVEIKEKTGVKLDFINLSGGVGVPYTPDKEPNDILAIGEGVRKVYEEI 257 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 Y E G ++ L TT + K + VD+ + + Sbjct: 258 LVPAGMGDVALYTELGRFMLAPYGHLITTAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 317 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + +GD + D + + Sbjct: 318 HITVLGKENEPCDHKYDVTGSLCENNDKFAIDRMLPKIDMGDILVIHDTGAHGFAMGYNY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DG+ K IR + +DY+ L Sbjct: 378 NGKLKSAEVLLCEDGSTKLIRRAETPDDYFATL 410 >gi|113954614|ref|YP_730241.1| diaminopimelate decarboxylase [Synechococcus sp. CC9311] gi|113881965|gb|ABI46923.1| diaminopimelate decarboxylase [Synechococcus sp. CC9311] Length = 453 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 49/396 (12%), Positives = 111/396 (28%), Gaps = 34/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ + + K + A K ++ + + G + S Sbjct: 46 GTPLYVLDEVTIRASAQEYREALKRHYPGDSLAVYASKAHSSLALTGLVASEGLGLDAVS 105 Query: 60 LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + E + E+ S+ ++ + L+ + + Sbjct: 106 AGELLTALDGGMPPERMVLHGNNKSVEELALAYSHGVMVVADNQHDLDCLAELVPQGGGP 165 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168 + L + P + S+ G V GL H + Sbjct: 166 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLQPVLTALAGCAWARVEGLHAHIGSQ 225 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224 + + + +++GGG+ + + + Sbjct: 226 IFELDPHRDLAAVMADALKLARELGHPVRDLNVGGGLGIRYVESDDPPSIDAWVKVVAEA 285 Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDY 272 ++ EPG ++V ++ TV + I+ V VD + + Sbjct: 286 VTLACRERGLELPRLMCEPGRSLVASSGVTVYTVGARKVVPGIRTYVSVDGGMSDNPRPI 345 Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + T + G+ C +GD+ + + G+ + YN+ Sbjct: 346 TYQSLYTACLADRPLAQADETITLAGKHCESGDVLLKDLSFPSCRSGEVLVVLATGAYNL 405 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + N R D Sbjct: 406 SMSSNYNRIPRPAAVLVNQGEAELIQRREQPEDLLR 441 >gi|224541272|ref|ZP_03681811.1| hypothetical protein CATMIT_00432 [Catenibacterium mitsuokai DSM 15897] gi|224525821|gb|EEF94926.1| hypothetical protein CATMIT_00432 [Catenibacterium mitsuokai DSM 15897] Length = 433 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 64/399 (16%), Positives = 124/399 (31%), Gaps = 38/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ + + + ++ K L A K F+ ++ N+Y G S Sbjct: 30 GTPLYVMSEGHIRHQMNELKTKFMDKYEKALPLFASKSFSCLAIYKLANEYGIGIDCVSA 89 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKK 117 E+ + F + ++ K + D + + ++ + A KL KK Sbjct: 90 GEISIALRAGFDPDKIYFHGNNKLPSEIEYALSHDVTHFVVDNFYEIENCEKIAGKLGKK 149 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 + LRI P + ++ G + +ES+ G+ H Sbjct: 150 VKATLRIVPGIKAGGHNYIMTGHKDTKFGFSSHYGIYLKAIQQILESDNIEYEGIHCHIG 209 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + +K + + + F I+ GGG + + Sbjct: 210 SQVFDLFAYVNAMLQFMKFVNEIYNTFGVVTSKINAGGGYGIAYTKQDEPLDFESITSEI 269 Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 K Y +EPG +V N TV I E V + ++ Sbjct: 270 MKVIYNEYDSHGWERPAVMIEPGRYVVGNAGITLYTVGCIKEIPDVRTYVSIDGGMSDNI 329 Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVA 324 L + I N T V G+ C + D+ + + GD + Sbjct: 330 RTPLYDAKYDGIVANKAGETKTKTVTVVGKICESADMITKDLPVTANIMPGDIFAVFSTG 389 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 YN + + +N + P + + +R +++D Sbjct: 390 AYNYSMSSNYNQLPKPAVVFTYEGESRVVVRRQTFDDLI 428 >gi|327462927|gb|EGF09248.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1] Length = 416 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 119/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G I++ E ++ L + + Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELNELGAEKFGIHALLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPDGEENDIAVIGQGVRLAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409 >gi|324991301|gb|EGC23234.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK353] gi|325687122|gb|EGD29145.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK72] Length = 416 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 118/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELIMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169 V + D ++ G I++ + G+ + Sbjct: 139 RYNPGGVFELGTSIMDNP-EAAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSNG 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRSESETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409 >gi|167751738|ref|ZP_02423865.1| hypothetical protein EUBSIR_02747 [Eubacterium siraeum DSM 15702] gi|167655546|gb|EDR99675.1| hypothetical protein EUBSIR_02747 [Eubacterium siraeum DSM 15702] Length = 423 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 55/393 (13%), Positives = 113/393 (28%), Gaps = 30/393 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I TP+++ D++ + N G + A+K + + L + G SS Sbjct: 19 IPTPFHIYDEKGIRETARKLYDAFSWNKGFREYFAVKATPNPYLMEILKEEGCGFDCSSY 78 Query: 61 YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-K 117 E+ML + + + A D + I + + ++ Sbjct: 79 TELMLSDKVGAKQHDIMFSSNATPDEDFKLAYKLGAIINLDDFTHIDVLDKLTGIPETIC 138 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKS 171 S+ ++ G + IE+ G+ + Sbjct: 139 CRYNPGGEFKTSEKGNVMDTPKDAKYGMTHEQIIEAYKILKEKGAKHFGMHAFLASNTLT 198 Query: 172 FLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + + + Q+ +I+L GG+ K + + + E K Sbjct: 199 NEYYPVLAGILFRTAVEIKEKTGVQLSFINLSGGVGVPYKPDQPANDIKVIGEGVRKAYE 258 Query: 228 QI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276 +I + E G ++ L + K + +D+ + + Sbjct: 259 EILVPAGMGDVAIFTELGRYMLAPNGALVAKAIREKHIYKEYIGLDACAANLMRPAIYGA 318 Query: 277 ESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + + G C D F + IGD I D + + Sbjct: 319 YHHITVMGKENQPCDHKYDITGGLCENCDKFAVDRMLPKIDIGDIIYIHDTGAHGFSMGY 378 Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 +NG + DG+ K IR + DY+ Sbjct: 379 NYNGKLRSAEVLLKEDGSFKLIRRAETPKDYFA 411 >gi|332184642|gb|AEE26896.1| Diaminopimelate decarboxylase [Francisella cf. novicida 3523] Length = 394 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 62/373 (16%), Positives = 120/373 (32%), Gaps = 32/373 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D + L + +A ++ A+K + D +Y G S Sbjct: 23 TPCYIYDSRLLEDTFASAKKALDKNFKNAEIHYAIKANHHPKIVDIAKKYGMGIDCVSGG 82 Query: 62 EVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKA--QKLHK 116 E+ E+ + + K + + D ++ ++ A + Sbjct: 83 EIRRAFEQNVDPQHIVFAGVGKADWEIELAIDNDIFAFNCESLEEIEVISKIASSKNKQV 142 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCE 168 I LR+NP++ + + G D + N+ GL +H + Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFIDVLNWLKNDFQNFDNINIIGLHYHVGSQ 202 Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 ++ F K IE I+ GGG+ D+ R + Sbjct: 203 ILNYQVFQSLAITTNEHIKLLKQNDIDIEHINFGGGLGIDYQNPQQNPIVDFDDYFARFR 262 Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277 EF E +++ E G ++V + L + VL + I+D+ + + LYQ Sbjct: 263 EFFEYCDDVKLHFELGRSLVGQSGVLLSQVLFNKVTQDTHFAIIDAGMTELIRPA-LYQA 321 Query: 278 SATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 I + G C + D+F +++ +K GD ++ Y + Sbjct: 322 QHKIEALVDESVDEKQHYHIVGPICESSDVFAKYYQLPKIKRGDLLAIYSAGAYGKVLAS 381 Query: 333 WFNGINMPTIAVK 345 +N Sbjct: 382 EYNLRPTVQEYFI 394 >gi|118464128|ref|YP_880747.1| diaminopimelate decarboxylase [Mycobacterium avium 104] gi|118165415|gb|ABK66312.1| diaminopimelate decarboxylase [Mycobacterium avium 104] Length = 472 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 50/406 (12%), Positives = 114/406 (28%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + G + A K F + +++ + E Sbjct: 64 GTPLFVVDEDDFRSRCREIASAFGG-GNNVHYAAKAFLCSEVARWIDEEGLSLDVCTGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F E ++ K AV + ++ ++++++ + A Sbjct: 123 LAVALHADFPPERITFHGNNKSVAELTAAVKAGVGHVVLDSMTEIERLDAIAADAGIVQD 182 Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + + V + G ++E + GL H + Sbjct: 183 VFVRLTVGVEAHTHEFISTAHEDQKFGLSVASGSALAAVGRVFDTEHLRLVGLHSHIGSQ 242 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F ++ + F + I + LGGG+ + L Sbjct: 243 IFDVAGFELAARRVIGLLHDAVEQFGVEKTAQIATVDLGGGLGISYLAADDPPPMGELAG 302 Query: 221 FSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + +EPG AI T V + + + Sbjct: 303 KLSAIVQHESAAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 362 Query: 265 -VEAHVP----DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318 + ++ D + + A + G+ C +GDI + ++ GD I Sbjct: 363 GMSDNIRTALYDAQYDARLVSRVSDAPAELARIVGKHCESGDIVVRDTWVPGDLRPGDLI 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + P + +R + +D + Sbjct: 423 GVAATGAYCYSLSSRYNMVCRPAVVAVRDGRARLVLRRETVDDLLS 468 >gi|300773320|ref|ZP_07083189.1| diaminopimelate decarboxylase [Sphingobacterium spiritivorum ATCC 33861] gi|300759491|gb|EFK56318.1| diaminopimelate decarboxylase [Sphingobacterium spiritivorum ATCC 33861] Length = 386 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 68/361 (18%), Positives = 115/361 (31%), Gaps = 26/361 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+Y D L LD + G + ALK + + G S E Sbjct: 14 ETPFYYYDMSLLERTLDACSAAAEKRGFHVHYALKANFNDRILQLIQAKGFGADCVSGNE 73 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHKK 117 V E F + + K + + ++ ++ A Sbjct: 74 VKKSIETGFKADKITFAGVGKSDKEIRYALAHEIFAFNVESIEEMEVINALAGETGQIAN 133 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN- 169 + LRINP+V ++ G + ES+ N+ GL FH + Sbjct: 134 VSLRINPNVDAQTHHYITTGLDENKFGIPNSELEKSAAILRESKHLNLVGLHFHIGSQIV 193 Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF 221 F + + F T I+ +++GGG+ + + F Sbjct: 194 DLNVFKSLCVKVNEWKNWFEERGTTIKVLNVGGGLGVDYKDPDGNPVTDFEAYFDIFDRF 253 Query: 222 SEKYSVQ-IYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 E+ S Q ++ E G A+V +L + VL KN +I+D+ + + L Sbjct: 254 LERNSHQEVHFELGRALVAQCGSLLSRVLYTKSGIKKNFLILDAGMTELMRPALYQAYHK 313 Query: 280 TIYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 V G C + D FG+ K GD I+ Y + +N Sbjct: 314 IERVGESDQEEINYDVVGPICESSDCFGKEVPLPVSKRGDLIAIRTAGAYGEVMSSHYNL 373 Query: 337 I 337 Sbjct: 374 R 374 >gi|76801473|ref|YP_326481.1| diaminopimelate decarboxylase [Natronomonas pharaonis DSM 2160] gi|76557338|emb|CAI48914.1| diaminopimelate decarboxylase [Natronomonas pharaonis DSM 2160] Length = 410 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 62/383 (16%), Positives = 119/383 (31%), Gaps = 26/383 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D ++ N ++ A K + TL ++ E Sbjct: 24 GTPLYVMDHDRIRANYARFSEAFDF--AHVMYAAKANTGRAVVRTLYDAGADIECAAAGE 81 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLH 115 + E E Y + TI L++ + A+ Sbjct: 82 LYRAIEAGVAPEDLQYTAVNPPAGDLDYAVDLWEDTPELTITAGAEMTLDRLE--ARGFD 139 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKNVNGLMFHNNCENK 170 ++ LR+NP + ++ G + E ++ GL H Sbjct: 140 GRLALRVNPGIGTGHHEKV-ATGKDAKFGLPYEEVEAVAEAARERFDLVGLHAHVGSGVL 198 Query: 171 SFLCFSAMLKNIEK-EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225 S + + +E++ LGGG + ++ + ++ + Sbjct: 199 SGDLDDHERALQRVADLAERVGDLEFVDLGGGFGVPYRPDEEPLDIEAAAEMVRRVTADL 258 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYPN 284 + LEPG +V + L T V I E + V+ VD+ + + + + Sbjct: 259 DATVALEPGRYLVADAGALVTRVNTIKETPETRVVGVDAGLTSMIRPAMFDSYHHIRNVT 318 Query: 285 TG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 G P + V G C + D+F + D ++ +V Y IN + F+ P Sbjct: 319 GGDREPVESSVGGPLCTSADVFCTDRPIPRPEADDLLAIGNVGAYGINLASQFHSQPRPG 378 Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364 D R ++ D Sbjct: 379 EVAIEGDNERVTRRRETFEDLTR 401 >gi|327462018|gb|EGF08347.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1057] Length = 416 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 54/392 (13%), Positives = 119/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGVRERARALHKAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ + TI + + K+ A Sbjct: 79 ELLMSQKLGFAGQDIMFSSNNTPAEDFQFARDLGATINLDAYEDVAFLKEAAGIPKVISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--NVNGLMFHNN--------CEN 169 V + D ++ G I++ + ++ F + + Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKDLGAEKFGIHALLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + + + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEGNDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 ATIYPNTGPYTAMVC---GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + G C D F +IGD + D + + +N Sbjct: 318 HITNMDRSESETEIVDVIGNLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409 >gi|313127023|ref|YP_004037293.1| diaminopimelate decarboxylase [Halogeometricum borinquense DSM 11551] gi|312293388|gb|ADQ67848.1| diaminopimelate decarboxylase [Halogeometricum borinquense DSM 11551] Length = 441 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 54/387 (13%), Positives = 113/387 (29%), Gaps = 33/387 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ID ++ N ++ A+K + +T+ + +S E Sbjct: 56 GTPLYVIDTDRVQENCARLQEAFSAE--EVRYAVKAHTGRAVLETVREAGLAAECASAGE 113 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLH 115 V + G Y + + + ++ +++ Sbjct: 114 VERALNAGYEGSEIQYTAVNPPARDLDHVVDRWRDHPELTVTVGAADTADRLRER--GFD 171 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCEN- 169 ++ +R NP V ++ G D E ++ ++ GL H Sbjct: 172 GRLCIRANPGVGAGHHEKV-RTGANAKFGVPYDDVPELAESIADDFDLVGLHAHAGSGIS 230 Query: 170 -----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKE 220 M + +E++ +GGG + +E Sbjct: 231 GDDLSNHRELVRRMGELTRNVESRVG-SLEFVDVGGGFGVPYRADEPPLDLDSVADATRE 289 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279 S + +EPG +V + L T V + E +V VD+ + + + Sbjct: 290 ALGDVSGTLAVEPGRYVVADAGVLLTRVNTVKEAPDATVVGVDAGMTTLLRPAMYDAYHE 349 Query: 280 TIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + +A V G C + D+ E + G+ ++ + Y + +N Sbjct: 350 IRNVSAADDVEAISATVAGPICESADVMCENRLLAYPRRGNLLAVGNAGAYGYEMASTYN 409 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDY 362 P + R + D Sbjct: 410 SRPRPAEVALSGGAARLVRRRETLTDL 436 >gi|224824693|ref|ZP_03697800.1| diaminopimelate decarboxylase [Lutiella nitroferrum 2002] gi|224603186|gb|EEG09362.1| diaminopimelate decarboxylase [Lutiella nitroferrum 2002] Length = 413 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 60/401 (14%), Positives = 116/401 (28%), Gaps = 47/401 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +L D + + + A K + + + + + SL E Sbjct: 17 GTPVWLYDAAVIRERVAQLR-AFDV----IRFAQKACSNIHILRLMREQGVVVDAVSLGE 71 Query: 63 VMLGHE------KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLH 115 + D A + + ++ L + + Sbjct: 72 IERALAAGFSGRGDEPSGIVLTADLLDQATLARVVEEQIPVNAGSIDMLRQLGTAS--PG 129 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN 169 ++ LRINP + + S+ G + I + GL H Sbjct: 130 HRVWLRINPGFGHGHSNKTNTGGENSKHGIWHEQLPDALQVIREHGLTLVGLHMHIGSGV 189 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKE 220 +E G +E IS GGG+ Y R + Sbjct: 190 DYGHLQQVCGAMVELVAG-MGHDLEAISAGGGLSIPYRDGEARIDTAHYFGLWDAARKEI 248 Query: 221 FSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES 278 + + V++ +EPG +V + TL V + ++ V+VD+ + + Sbjct: 249 EARLGHPVRLEIEPGRFLVAESGTLLAEVRAVKDMGSRHFVLVDAGFNDLMRPSMYGSYH 308 Query: 279 ATIYPNTGPY--------TAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDV 323 G +V G C +GD+F + P ++GD + F D Sbjct: 309 GISLVAQGRPQPAGDALLPTVVAGPLCESGDVFTQEDGGVVVTRDLPPCQVGDYLLFHDT 368 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + D R + + Sbjct: 369 GAYGASMSSNYNSRPLLPEVLIDGDAVRLIRRRQTMAELLA 409 >gi|86607495|ref|YP_476258.1| diaminopimelate decarboxylase [Synechococcus sp. JA-3-3Ab] gi|86556037|gb|ABD00995.1| diaminopimelate decarboxylase [Synechococcus sp. JA-3-3Ab] Length = 458 Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats. Identities = 57/401 (14%), Positives = 115/401 (28%), Gaps = 39/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L + G ++L A K + + Q G +S Sbjct: 48 GSPLYILDEWTLRHACRLYRDTWARCYPGGSQVLYATKAWNCLAICALALQEGLGLDVAS 107 Query: 60 LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + G E + + A E+ L T++ +++ +L + A Sbjct: 108 GGELYTAIQAGARGEELYLHGNAKSAEELAMALEVGCTLVADSLYELQQLAALATPARPA 167 Query: 118 IGL-RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169 L R+NP + + S+ G E GL H + Sbjct: 168 RLLVRVNPGIDVHTHEYIRTGQTDSKFGIGQWQLPEVFDFLAAHPQLQCVGLHAHIGSQI 227 Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + + + ++ +++GGG+ + E Sbjct: 228 FDLQGHRDLAGVLAQVWRQGLEKGLPLQELNVGGGLGIRYVESDDPPSIPEWVEAVATAV 287 Query: 227 VQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKN--------LVIVDSSVEA 267 Q + EPG ++V T+ + V +D + Sbjct: 288 QQSFTAAGIPLPKVLCEPGRSVVGPAAVTAYTLGGKKWIPPSEDLPEGRLYVTIDGGMSD 347 Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + A V G+ C +GD+ + G+ + Sbjct: 348 NPRPITYGARYTALLANRPEAEATQRVTVAGKHCESGDVLLKDVLLPNPAPGEVLVVLTS 407 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N P + N +R +Y D Sbjct: 408 GAYNYSMASNYNRFPRPAAVLVNQGKAQLILRRETYADLIR 448 >gi|320335247|ref|YP_004171958.1| diaminopimelate decarboxylase [Deinococcus maricopensis DSM 21211] gi|319756536|gb|ADV68293.1| diaminopimelate decarboxylase [Deinococcus maricopensis DSM 21211] Length = 410 Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 119/370 (32%), Gaps = 22/370 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D +L + ++ A+K + + L G SL E Sbjct: 48 GTPLYVYDAAELDAAVGRVRAAFG--HARVSYAMKANSNLTVLRRLQARGIGFECVSLGE 105 Query: 63 VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + E G + A E + T I + ++ + + Sbjct: 106 LHRAREVGARGDDVLVNGPAKSAEEYTLGAALGATFIVDREEEVALL-----PPRSRALV 160 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSFLC 174 R+NP++ S S+ G + + + + GL H + Sbjct: 161 RVNPALDVSTHDHLATGAAISKFGVRLDVAADVLAALRAAGHDARGLHVHIGSAIRDAAD 220 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 F + +E + +GGG + R +E + + Q+++EPG Sbjct: 221 FERAFARLADLAPLTGP-LEVLDVGGGWSLDA---DLHGIAARAREAASAFGAQVWVEPG 276 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--YTAMV 292 +V L T V+ + ++ ++D+ + + L + +G T + Sbjct: 277 RYLVAGAGALLTRVVGLKRTGRSFALIDAGMTELLRPMLYGAQHPVQALWSGADVQTYDL 336 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G +C +GD+ +G I+ + Y + + + + P + + + Sbjct: 337 AGPACESGDLLARDVRLPEPHVGAVIAVGEAGAYGASMSSTYLTRSRPMEVLWDGE-WSV 395 Query: 353 AIREFSYNDY 362 R + D Sbjct: 396 IRRRETPQDL 405 >gi|118619175|ref|YP_907507.1| diaminopimelate decarboxylase LysA [Mycobacterium ulcerans Agy99] gi|118571285|gb|ABL06036.1| diaminopimelate decarboxylase LysA [Mycobacterium ulcerans Agy99] Length = 472 Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats. Identities = 55/406 (13%), Positives = 119/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + G + A K F + +N+ S+ E Sbjct: 64 GTPLFVIDEDDFRSRCQEIAAAFGG-GHNVNYAAKAFLCSEIARWVNEEGLSIDVSTGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F E + K AV + I+ +++ ++ + A + Sbjct: 123 LAVALHANFPPERITLHGNNKSVAELTTAVKAGVGHIVLDSMIEIERLDAIAGEAGIVQD 182 Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + + V + G + ++ + GL H + Sbjct: 183 VFVRLTVGVEAHTHEFISTAHEDQKFGLSISSGAAMAAVRRVFATDHLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ--------IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + + + + LGGG+ + L + Sbjct: 243 IFDVDGFELAAHRVIGLLREVVAEFGSEKTAQLAMVDLGGGLGISYLSSDDPPPVGELAD 302 Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 ++ +EPG AI T V + + + V VD Sbjct: 303 KLGAIVSNESAAVGLPAPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATANRRYVSVDG 362 Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L + + + A V G+ C +GDI + ++ GD + Sbjct: 363 GMSDNIRTALYDAQYDVRLVSRVSDAPAMLARVVGKHCESGDIIVRDTWVPDDLQPGDLV 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N I P + +R + +D + Sbjct: 423 AVAATGAYCYSLSSRYNMIGRPAVVAVRAGKARLVLRRETVDDLLS 468 >gi|21224744|ref|NP_630523.1| diaminopimelate decarboxylase [Streptomyces coelicolor A3(2)] gi|8134396|sp|Q9ZBH5|DCDA_STRCO RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|4158184|emb|CAA22747.1| diaminopimelate decarboxylase [Streptomyces coelicolor A3(2)] Length = 440 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 54/399 (13%), Positives = 114/399 (28%), Gaps = 45/399 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +L D + +D + A K + + + + + S E Sbjct: 32 GTPLWLYDAATIRAQIDRLRRFDV-----IRYAQKACSNLHILRLMREEGVHVDAVSEGE 86 Query: 63 VMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + E + + + + + L++ A Sbjct: 87 IERALAAGYRVGGDDEPIVFTADLLNRSTLRRVVELGIPVNAGSPQMLDQVGRAA--PGH 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 + +RINP + + S+ G + ++ ++ GL H Sbjct: 145 PVWIRINPGFGHGHSRKTNTGGEHSKHGIWHEHLEESLALVDRHGLDLVGLHMHIGSGVD 204 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------- 223 + ++ + + K+ I IS GGG+ + R E + Sbjct: 205 -YGHLESVCETMVKQVRMAGRDIRAISAGGGLSVPYTPGDPEIDTDRYFELWDAARRELV 263 Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 + V++ +EPG +V L V N + VD+ + + Sbjct: 264 SELGHPVRLEIEPGRFLVAGAGVLAAEVRAQKPVGSNYFVLVDAGFNDLMRPAMYGSNHR 323 Query: 280 TIY-------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325 + ++ G C +GD+F E +GD + F D Sbjct: 324 VSVLDADGAPRASDARDTVLAGPLCESGDVFTQVEGGDVEPVPVPRTDVGDLVVFHDTGA 383 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + T R + + Sbjct: 384 YGASMSSTYNSRPLIPEVLVDGAETRLIRRRQTVAELLA 422 >gi|41408567|ref|NP_961403.1| LysA_2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396925|gb|AAS04786.1| LysA_2 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 472 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 51/406 (12%), Positives = 114/406 (28%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + G + A K F + +++ + E Sbjct: 64 GTPLFVVDEDDFRSRCREIASAFGG-GNNVHYAAKAFLCSEVARWIDEEGLSLDVCTGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F E ++ K AV + ++ ++++++ + A Sbjct: 123 LAVALHADFPPERITFHGNNKSVAELTAAVKAGVGHVVLDSMTEIERLDAIAADAGIVQD 182 Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + + V + G ++E + GL H + Sbjct: 183 VFVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAALAAVGRVFDTEHLRLVGLHSHIGSQ 242 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F ++ + F + I + LGGG+ + L Sbjct: 243 IFDVAGFELAARRVIGLLHDAVEQFGVEKTAQIATVDLGGGLGISYLAADDPPPMGELAG 302 Query: 221 FSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + +EPG AI T V + + + Sbjct: 303 KLSAIVQHESAAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 362 Query: 265 -VEAHVP----DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318 + ++ D + + A V G+ C +GDI + ++ GD I Sbjct: 363 GMSDNIRTALYDAQYDARLVSRVSDAPAELARVVGKHCESGDIVVRDTWVPGDLRPGDLI 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + P + +R + +D + Sbjct: 423 GVAATGAYCYSLSSRYNMVCRPAVVAVRDGRARLVLRRETVDDLLS 468 >gi|82545140|ref|YP_409087.1| diaminopimelate decarboxylase [Shigella boydii Sb227] gi|187733218|ref|YP_001881421.1| diaminopimelate decarboxylase [Shigella boydii CDC 3083-94] gi|81246551|gb|ABB67259.1| diaminopimelate decarboxylase [Shigella boydii Sb227] gi|187430210|gb|ACD09484.1| diaminopimelate decarboxylase [Shigella boydii CDC 3083-94] gi|320185573|gb|EFW60338.1| Diaminopimelate decarboxylase [Shigella flexneri CDC 796-83] gi|332092188|gb|EGI97266.1| diaminopimelate decarboxylase [Shigella boydii 3594-74] Length = 420 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 117/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N ++ + + R + Sbjct: 379 GASMSSNYNSRSLLPEVLFDNGQARLIRRRQTI 411 >gi|312864719|ref|ZP_07724950.1| putative diaminopimelate decarboxylase [Streptococcus downei F0415] gi|311099846|gb|EFQ58059.1| putative diaminopimelate decarboxylase [Streptococcus downei F0415] Length = 414 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 61/390 (15%), Positives = 119/390 (30%), Gaps = 27/390 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 19 PTPFHLYDEKGIRETARAVNQAFSWNPGFKEYFAVKATPNPSILKILQEEGCGVDCATDV 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EVM+ + + + + E I + + ++ A + LR Sbjct: 79 EVMMAKKLDFKDISFTSNDTRAEEFVYAREVGAMINLDAYEHIAFLEEVAGLPET-VSLR 137 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFH------NNCENKS 171 NP +S + S+ G ++ V H N Sbjct: 138 YNPGGVFSLGTDIMDHPEESKFGMTKAQLLQGYKDLKAKGVKQFGLHAFLASNTVTNNYY 197 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI-- 229 + + + ++ +I+L GGI ++ + + + QI Sbjct: 198 PTLAGQLFELALEIREETGVELNFINLSGGIGIDYSPADKQNDIALIGQGVHEKFDQILV 257 Query: 230 ---------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + E G ++ L T VL + + ++ V VD+S + + Sbjct: 258 PNGLGQIKIFTELGRFMLAPHGHLVTKVLHLKDTYRHYVGVDASAVNLLRPAMYDAYHHI 317 Query: 281 IYPNTGPYTAMVC---GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G C D F + ++GD + D + + +N Sbjct: 318 TNISNPDGPIQVVDVTGSLCENNDKFAKNRELSEPRVGDTLVIHDTGAHGFSMGYQYNAR 377 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + DG+ K IR DY+ L Sbjct: 378 LRSAEVLLQEDGSAKLIRRAEKPGDYFATL 407 >gi|284048965|ref|YP_003399304.1| Orn/DAP/Arg decarboxylase 2 [Acidaminococcus fermentans DSM 20731] gi|283953186|gb|ADB47989.1| Orn/DAP/Arg decarboxylase 2 [Acidaminococcus fermentans DSM 20731] Length = 420 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 60/393 (15%), Positives = 116/393 (29%), Gaps = 30/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N + + N G K A+K G+ + + GT SS Sbjct: 20 PTPFHIYDEKGIRNTVRSINKAFAWNKGFKEYFAVKATPLPGILKIMKEEGCGTDCSSYP 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L F G ++ ++ I + + ++ + A Sbjct: 80 ELLLSDVCGFKGHDIMFSSNDTPVKDMQEAYKLGAIINLDDFTMIDFLEQVAAIPETICC 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169 V + D S+ G E+ + K V H Sbjct: 140 RFNPGGVFALGNDIMDNPG-DSKYGMTRDQLREAFKILKAKGVKHFGIHAFLASNTVTNG 198 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + +++I+L GG+ + + + E K ++ Sbjct: 199 YYPELARQLFQLAVDMKKETGVAVDFINLSGGVGIPYRPEQTPNDIAAIGEGVRKVYEEV 258 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G + L T VL K V VD+ + + Sbjct: 259 LTPAGMGNVALFTEMGRFVTGPYGGLVTKVLHFKHIYKEYVGVDACAANLMRPAMYGAYH 318 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 +T V G C D F + GD + D + + Sbjct: 319 HITVLGKENEPCDHTYDVTGGLCENNDKFAIDRKLPKIDKGDYLFIHDTGAHGSAMGYNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 N + DG+++ +R + DY+ L Sbjct: 379 NAKLWCAELLLKEDGSVELLRRAETEKDYFATL 411 >gi|320176405|gb|EFW51459.1| Diaminopimelate decarboxylase [Shigella dysenteriae CDC 74-1112] Length = 420 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 117/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGPVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N ++ + + R + Sbjct: 379 GASMSSNYNSRSLLPEVLFDNGQARLIRRRQTI 411 >gi|16332032|ref|NP_442760.1| diaminopimelate decarboxylase [Synechocystis sp. PCC 6803] gi|2499348|sp|Q55484|DCDA_SYNY3 RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|1001344|dbj|BAA10831.1| diaminopimelate decarboxylase [Synechocystis sp. PCC 6803] Length = 469 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 58/404 (14%), Positives = 122/404 (30%), Gaps = 42/404 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L + +++ A K ++ + Q G S Sbjct: 56 GSPLYILDETTLRQAAQQYRQSFQAHYPGSSQVIYASKAWSCLAVVAIAAQEGLGFDVVS 115 Query: 60 LYEV--------MLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 E+ LG + + + + E+ ++ TII + +L Sbjct: 116 GGELFTTVSALKQLGWDEAEIAEKIYFHGNNKSVQELQEAIAINCTIIVDNWLELETLTK 175 Query: 110 KAQK--LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNG 160 A KI LR+ P + S+ G + + G Sbjct: 176 LAADSGAPVKIMLRLTPGIECHTHEYIKTGHLDSKFGFDPNQLEAVFTYIAQQPSLHCLG 235 Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR 217 L H + + + + + F + + +++GGG+ + + Sbjct: 236 LHAHIGSQIFERQPHKDLGEVLVQWFTKGLTYGLPLTELNIGGGLGICYTESDDPPSIEE 295 Query: 218 L-----------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSS 264 + ++ EPG ++V + V + NI+ + VD Sbjct: 296 WAQVAAISVAKACDRQNIPYPKLIAEPGRSLVGSACVTAYRVGGRKVVPNIRTYISVDGG 355 Query: 265 VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + + A + T V G+ C +GDI + + GD + Sbjct: 356 MSDNPRPITYQSVYRVALANRMNDEITETVTVAGKHCESGDILVKDVALPAAEPGDIMVV 415 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + P + N ++ +Y D Sbjct: 416 AATGAYNHSMASNYNRLGRPAAVLVNQGQANLILQRETYTDLLR 459 >gi|256380150|ref|YP_003103810.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827] gi|255924453|gb|ACU39964.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827] Length = 474 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 56/408 (13%), Positives = 122/408 (29%), Gaps = 47/408 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + + + A K F + + + + S E Sbjct: 65 GTPLFVMDEADFRSRCAEHAAAFGDP-SLVHYASKAFLSVAVARWVAEEGLSIDVCSGGE 123 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTII--FNTVSQLNKFKDKAQKL--HKK 117 + + +F E A + K A + + ++ ++ + A++ ++ Sbjct: 124 LAIALRAEFPPERIALHGNNKSVAELAAAVDAGVGVVVLDSFQEIARLDQVARERGRVQQ 183 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + +++E ++ GL H + Sbjct: 184 VMIRVTVGVEAHTHEFIATAHEDQKFGFSLSSGDAAEAARRVVKAEGLSLVGLHSHIGSQ 243 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ--------IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + + + + LGGG+ L Sbjct: 244 IFDASGFEVAARRVVSLLAELRVEHGPALLDELTTLDLGGGLGIAYTADDDPPPPAVLAA 303 Query: 221 FSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDS 263 Q +EPG AIV T V I + + V VD Sbjct: 304 QLRDIVAQECGRAGLPVPKLAVEPGRAIVGPGTVTLYEVGTIKDVQLDAGATRRYVSVDG 363 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEK-PVKIGD 316 + ++ L + V G+ C AGD+ + + GD Sbjct: 364 GMSDNIRTALYDAVYDCRLVSRAAEEGSEAVLCRVVGKHCEAGDVVVRDCWLPADLAPGD 423 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 ++ Y + + +N + P +A + + +R + D + Sbjct: 424 LVAVAATGAYCYSMASGYNRLPRPALAAVDGGRSRLLLRRETEEDLFR 471 >gi|319441083|ref|ZP_07990239.1| hypothetical protein CvarD4_04872 [Corynebacterium variabile DSM 44702] Length = 476 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 57/408 (13%), Positives = 117/408 (28%), Gaps = 47/408 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ G + A K F + + + +S E Sbjct: 59 GTPVFVMDEADFRGRCRRLAAAFGG-GEHVHYASKAFLSVTVARWVADEGLALDVASQGE 117 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + +D AV + + I+ ++V ++ + A L + Sbjct: 118 LEIALTAGFPAERITVHGNNKSEDFLAVAVRAGVELIVIDSVEEIGRLAKVASGLGVTQD 177 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + +R+ P V + + G +++ + GL H + Sbjct: 178 VLVRVKPGVHVDTHEFIATSHEDQKFGFSLASGSAERACLAVVDAAGMRLRGLHCHVGSQ 237 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQ------IEWISLGGGIHFTDKDYPVKDFCQRL 218 F +L + + + + LGGG + + + Sbjct: 238 VFEADGFGLAADRLLGLWARLIDELGEESDEATALNTLDLGGGYGIAYTPDQEELDVETV 297 Query: 219 KEFSEKYSVQIYLE-----------PGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--- 264 + Q +E PG AI +T V + + + V Sbjct: 298 ASDLLRRVRQTAVERGLDAPVLNVEPGRAIAGPSTVTLYAVGTVKDVHTSDDTVRRYISV 357 Query: 265 ---VEAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKP-VKIGD 316 + ++ L E N V G C +GDI + GD Sbjct: 358 DGGMSDNIRPALYQAEYDCRLANRHAIGTLVPTRVVGSHCESGDILINDALMPDDIAAGD 417 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 ++ Y + +N + P + + + IR + D Sbjct: 418 ILAVPATGAYCYMMASRYNMLTRPPVVIVGDGQSRVMIRRETVADVLA 465 >gi|82778214|ref|YP_404563.1| diaminopimelate decarboxylase [Shigella dysenteriae Sd197] gi|309785148|ref|ZP_07679779.1| diaminopimelate decarboxylase [Shigella dysenteriae 1617] gi|81242362|gb|ABB63072.1| diaminopimelate decarboxylase [Shigella dysenteriae Sd197] gi|308926268|gb|EFP71744.1| diaminopimelate decarboxylase [Shigella dysenteriae 1617] Length = 420 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAARQQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALLEVKAGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|119487027|ref|ZP_01620899.1| diaminopimelate decarboxylase [Lyngbya sp. PCC 8106] gi|119455956|gb|EAW37090.1| diaminopimelate decarboxylase [Lyngbya sp. PCC 8106] Length = 461 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 51/398 (12%), Positives = 116/398 (29%), Gaps = 36/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+Q L +L A K ++ + + G S Sbjct: 53 GSPLYIVDEQTLRAACRQYREALARYYPGESLVLYASKAWSCLAICALVASEGLGLDVVS 112 Query: 60 LYEVMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ +T + EI + TI+ + L +++ + Sbjct: 113 GGELYTAITANVNPQTLYLHGNNKSRDEILLAIETGCTIVIDNWLDLQMLAQLSEQRSTQ 172 Query: 118 IGLRIN----PSVSYSKFILADPNRPFSRLGEKCKDKI-----ESEIKNVNGLMFHNNCE 168 +R+ P + S+ G ++ ++ + H + Sbjct: 173 APIRVMVRLTPGIECHTHEYIRTGHLDSKFGFDPNQFDAVFSAIAQQPGLSCVGLHAHIG 232 Query: 169 NKSFLCFSA-----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----- 218 ++ F ++ + + I +++GGG+ + + Sbjct: 233 SQIFELQPHGDLASVIVEAITKASQYGLNISEVNVGGGLGICYTEADDPPSIETWAKTVC 292 Query: 219 ------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 + ++ EPG +IV TV + + + + Sbjct: 293 QAMVKACQQQNIELPKLLCEPGRSIVGPACITAYTVGSQKQIPGIRTYIAVDGGMSDNPR 352 Query: 271 DYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + N T V G+ C +GDI + P + GD ++ Y Sbjct: 353 PITYQSVYRVVLVNRMSAPLSQTVTVAGKHCESGDIVIKDAQLPPCEPGDILAVLATGAY 412 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + +N ++ P + + + +Y D Sbjct: 413 NYSMASNYNRLSRPAAVLVSEGECNLILERETYQDLIR 450 >gi|306832019|ref|ZP_07465174.1| diaminopimelate decarboxylase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425945|gb|EFM29062.1| diaminopimelate decarboxylase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 438 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 120/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 43 PTPFHLYDEKGIREKARALNKAFAWNKGFKEYFAVKATPTPAILKILQEENCGVDCATEV 102 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+++ H+ + + E TI + + K+ A + LR Sbjct: 103 ELLMSHKLGFTDIMFSSNDTPAREFRYAKEIGATINLDAYEHIAFLKEVAGLPET-VSLR 161 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN----KS 171 NP ++ N S+ G I+ + + V G+ Sbjct: 162 YNPGGVFALGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKNFGIHSFLASNTVTNDYY 221 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--- 228 + + + + +I+L GG+ + + + + + + Sbjct: 222 PELARQLFELAVEVKEKTGVAVSFINLSGGVGVNYRPEQEPNDIAVIGKGVHRVFDEVLI 281 Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 I+ E G ++ L T V + + + VD+S + + Sbjct: 282 PAGLGDVKIFTELGRFMLAPHGLLVTKVRHRKQTYRTYIGVDASAVNLMRPAMYDAYHHI 341 Query: 281 IY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 PN V G C D F + ++GD + D + + +NG Sbjct: 342 TNVSNPNGKLEVVDVVGSLCENNDKFAKRRELPEARVGDTLVIHDTGAHGFSMGYQYNGR 401 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + DG+ + IR + DY+ Sbjct: 402 LRSAEILYQEDGSARLIRRAETPEDYFA 429 >gi|254525643|ref|ZP_05137695.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9202] gi|221537067|gb|EEE39520.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9202] Length = 457 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 56/397 (14%), Positives = 114/397 (28%), Gaps = 35/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L + + + A K ++ M + ++ G + S Sbjct: 49 DSPLYILDESTLRKSCRAYKKALEKYFPGESLPIYASKANSSIFMSNLVSSEGLGLDAVS 108 Query: 60 LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + E ++ D EID + N II + L + + + L+ Sbjct: 109 EGELLTALKGGVPNEKIVFHGNNKSDKEIDFAIRNNIKIIVDNDYDLKRLEKISNSLNHD 168 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168 + + I P + S+ G + + N+ G+ H + Sbjct: 169 LEIMIRFTPGIECHTHEYIKTGSFDSKFGFGIEYLNNLFASISETKHLNLKGIHAHIGSQ 228 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------- 216 + + + K F I +++GGG+ Sbjct: 229 IFELDPHKDLGEIMVKVILDAKKFGHNIRELNVGGGLGIKYTQNDDPPSIDEWVKTISTS 288 Query: 217 RLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 ++ + L EPG +IV+ + E VD + + Sbjct: 289 VVEACKKHNLDLPILMCEPGRSIVSTAGITIYKIGAFKEIPGIRTYLSVDGGMSDNPRPI 348 Query: 273 LLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + G+ C +GD+ K GD I YN Sbjct: 349 TYQSNYSACLVKNPFNINSKNKYTIAGKHCESGDVLFRDIELANCKTGDLICVFGTGAYN 408 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + + D Sbjct: 409 NSMSSNYNRIPRPAAILVCDGEAEIIQKRERPFDLLR 445 >gi|253582415|ref|ZP_04859638.1| diaminopimelate decarboxylase [Fusobacterium varium ATCC 27725] gi|251835954|gb|EES64492.1| diaminopimelate decarboxylase [Fusobacterium varium ATCC 27725] Length = 434 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 67/400 (16%), Positives = 134/400 (33%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + N+ K++ ++ A K F + + + +Y + S Sbjct: 29 GTPLYIMDQSLIEENIIKYKNNFKSSKFDTSIVYASKAFLSKAICQLVEKYDIEIDAVSG 88 Query: 61 YEVMLGH-EKFG-GETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + H + D E++ L +II + ++ + ++ +KK Sbjct: 89 GELYTIKTSGLPMKKVHMHGNNKTDEELEMCLDYEIGSIIIDNEEEIERLSRICKEKNKK 148 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 I +RIN + ++ S+ GE D ++ E G H Sbjct: 149 IKVMMRINIGIDAHTHEYIKTSKHSSKFGESIFDERITEIVGKIVKDENMEFLGFHCHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + +M+K +K I I+LGGG + ++ + Sbjct: 209 SQIFDTKAFHEGIESMVKETKKISEVLGIYIPEINLGGGFGVYYTEKDTAIDVEQFMKSM 268 Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 ++ + +EPG +IV N + TV + +D + ++ Sbjct: 269 IEHLERSLEAEKMKLKKVSIEPGRSIVANAGSTLYTVGGTKTTYGGVKYIFIDGGMTDNI 328 Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + N + G+ C +GD+ + + GD I Sbjct: 329 RPALYQAEYEAVVANKINEPAEDVVTIAGKCCESGDLIIKNGKLAKAETGDLILVATTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + N +N P + + +I+ S D N Sbjct: 389 YGYSMSNNYNKAPKPAVVFVKDGKSALSIKRESLEDLVRN 428 >gi|331082967|ref|ZP_08332087.1| hypothetical protein HMPREF0992_01011 [Lachnospiraceae bacterium 6_1_63FAA] gi|330399962|gb|EGG79620.1| hypothetical protein HMPREF0992_01011 [Lachnospiraceae bacterium 6_1_63FAA] Length = 427 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 62/391 (15%), Positives = 125/391 (31%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G K A+K A + + L +Y G SS Sbjct: 20 PTPFHLYDEKGIRENAKAMKEAFSWNKGFKEYFAVKANANPFLINLLREYGFGCDCSSYT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML GE ++ + TI + ++ ++ + K+ ++I Sbjct: 80 ELMLSEAIGCVGEDIMFSSNDTPTEDFQYAAQLGATINLDDITHIDFLEKAIGKIPERIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169 R NP + N ++ G + ++ G+ Sbjct: 140 CRFNPGGIFEVCNGIMDNPGDAKYGMTEEQIFDAFRILKEKGSKEFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + + +I +I+L GG+ + + + E + + Sbjct: 200 YYPMLAKKLFELAVRLEKETGAKICFINLSGGVGIPYTPDQEPNDIRAIGEGVHRVYDEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L TT + K+ + +D+ + + Sbjct: 260 LVPAGMGDVAIYSELGRFMMGPYGCLVTTAIHEKHTHKDYIGLDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F ++ GD + D + + Sbjct: 320 HITVMGKENLTLDHKYDVTGSLCENNDKFAVDRMLPEIQKGDILVIHDTGAHGFAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR +DY+ Sbjct: 380 NGKLKSAELLLKEDGSVQLIRRAEKPSDYFA 410 >gi|237729800|ref|ZP_04560281.1| diaminopimelate decarboxylase [Citrobacter sp. 30_2] gi|226908406|gb|EEH94324.1| diaminopimelate decarboxylase [Citrobacter sp. 30_2] Length = 418 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 114/396 (28%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRGQIAKLSQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 G + + D A + + +V L + + ++ L Sbjct: 82 RALAAGFVPGKDEIVFTADMIDEATLARVHELSIPVNAGSVDMLEQLGQVS--PGHRVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 R+NP + + S+ G D I+ + G+ H Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWYSDLPAALEVIQRYKLKLVGIHMHIGSGVDYAHL 199 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-K 224 + + F +E IS GGG+ Y R + Sbjct: 200 EQVCGAMVRQVV-EFGQDLEAISAGGGLSIPYHEGEEAIDTDHYFGLWNAAREQIAKHLG 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA---- 279 + + + +EPG +V L V + ++ V++D+ + + Sbjct: 259 HPIALEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPAMYGSYHHISAL 318 Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 +T +V G C +GD+F E V GD + D Y Sbjct: 319 SGDGRSLEHTPQRETVVAGPLCESGDVFTQQEGGNVETRLLPAVVPGDYLVLHDTGAYGA 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + ++ Sbjct: 379 SMSSNYNSRPLLPEVLFDNGVARLIRRRQTIDELLA 414 >gi|283786539|ref|YP_003366404.1| diaminopimelate decarboxylase [Citrobacter rodentium ICC168] gi|282949993|emb|CBG89621.1| diaminopimelate decarboxylase [Citrobacter rodentium ICC168] Length = 420 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 121/398 (30%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D + +S + +V L + + + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDNATLSRVSELQIPVNAGSVDMLAQLGEVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D ++ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPQALAVMQQYQLTLAGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + ++ F ++ IS GGG+ + Y R + Sbjct: 199 GHLEQVCGAMVRQVVEFGQDLQAISAGGGLSIPYREGEEAVDTRHYFGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAESGVLVTQVRSVKQMGNRHFVLVDAGFNDLMRPAMYGSYHHIT 318 Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRSLENAPQVETVVAGPLCESGDVFTQQEGGNVETRTLPAVKPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|260589538|ref|ZP_05855451.1| protein TabA [Blautia hansenii DSM 20583] gi|260540106|gb|EEX20675.1| protein TabA [Blautia hansenii DSM 20583] Length = 427 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 62/391 (15%), Positives = 125/391 (31%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G K A+K A + + L +Y G SS Sbjct: 20 PTPFHLYDEKGIRENAKAMKEAFSWNKGFKEYFAVKANANPFLINLLREYGFGCDCSSYT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML GE ++ + TI + ++ ++ + K+ ++I Sbjct: 80 ELMLSEAIGCVGEDIMFSSNDTPTEDFQYAAQLGATINLDDITHIDFLEKAIGKIPERIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169 R NP + N ++ G + ++ G+ Sbjct: 140 CRFNPGGIFEVCNGIMDNPGDAKYGMTEEQIFDAFRILKEKGSKEFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + + +I +I+L GG+ + + + E + + Sbjct: 200 YYPMLAKKLFELAVRLEKETGAKICFINLSGGVGIPYTPDQEPNDIRAIGEGVHRVYDEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L TT + K+ + +D+ + + Sbjct: 260 LVPAGMGDVAIYSELGRFMMGPYGCLVTTAIHEKHTHKDYIGLDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F ++ GD + D + + Sbjct: 320 HITVMGKENLPLDHKYDVTGSLCENNDKFAVDRMLPEIQKGDILVIHDTGAHGFAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR +DY+ Sbjct: 380 NGKLKSAELLLKEDGSVQLIRRAEKPSDYFA 410 >gi|255658989|ref|ZP_05404398.1| diaminopimelate decarboxylase [Mitsuokella multacida DSM 20544] gi|260848948|gb|EEX68955.1| diaminopimelate decarboxylase [Mitsuokella multacida DSM 20544] Length = 419 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 61/393 (15%), Positives = 120/393 (30%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D+ + N+ + A+K + L++ GT +SSL Sbjct: 21 PTPFHIYDEHAIRENIRKLQKAFAWAPRFREQFAVKALPNPRILQVLHEEGAGTDNSSLA 80 Query: 62 EVML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L G E + E + I + +S L+ + A Sbjct: 81 ELVLSEVSGYKGSEILLTSNDTPADEFQKAIELGAIINLDDISHLDYLEKNAGLPEIIC- 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENK----- 170 + ++ G E+ V H + Sbjct: 140 -FRYNPGDLIEGNDIIGKPTEAKYGLTRDQLFEAYKMAKEKGVKRFGLHTMVASNERRTE 198 Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 M + + +E++++GGGI + + + E K ++ Sbjct: 199 AFVFTAKLMFELAVELKNRLGIHVEFVNIGGGIGIPYRPEEEPVDLEAVGEGIHKLYDEM 258 Query: 230 YL-----------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G AI L +T + + K+ + +DS + + + Sbjct: 259 MVPEGLGDVAMMTESGRAITGPAGWLVSTAIHEKKTYKDYIGLDSCMANLMRPAMYGAYH 318 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F + IGDR+ D + + Sbjct: 319 HITIAGKENEPCDHVYDVTGSLCENNDKFAIDRKLPKIDIGDRVIIHDTGAHGSAMGFNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + + DG+++ IR + +DY+ L Sbjct: 379 NGKLWCAELLLHEDGSVELIRRAETLDDYFATL 411 >gi|167627334|ref|YP_001677834.1| diaminopimelate decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597335|gb|ABZ87333.1| diaminopimelate decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 394 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 58/372 (15%), Positives = 116/372 (31%), Gaps = 30/372 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D L + +A ++ A+K + + +Y G S Sbjct: 23 TPCYIYDSTLLDDTFASAKKALDKNFKNAEIHYAIKANHHPKIVNIAKKYGMGIDCVSGG 82 Query: 62 EVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKA--QKLHK 116 E+ E+ + + K + + D FN+ S A + Sbjct: 83 EIRRALEQNVDPQNIVFAGVGKADWEIELAIDNDIFAFNSESLEEIEVISQIASSKNKQV 142 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--------VNGLMFHNNCE 168 I LR+NP++ + + G + + + + GL +H + Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFANILNWLKNDFQNFGNIKIIGLHYHVGSQ 202 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 + F + K IE I+ GGG+ ++ R + Sbjct: 203 ILNYQVFESLAITTNEHIKLLKQNDIDIEHINFGGGLGIDYQNPHQNPIVDFDNYFARFR 262 Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277 EF E +++ E G ++V + L + VL + I+D+ + + L + Sbjct: 263 EFFEYCDDVKLHFELGRSLVGQSGVLVSQVLFNKVTQDTHFAIIDAGMTELIRPALYQAQ 322 Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G C + D+F +++ +K GD + Y + Sbjct: 323 HKIEALIDESVNEKQHYHIVGPICESSDVFAKYYQLPKIKRGDLLVIYSAGAYGKVLASE 382 Query: 334 FNGINMPTIAVK 345 +N Sbjct: 383 YNLRPTVQEYFI 394 >gi|22299304|ref|NP_682551.1| diaminopimelate decarboxylase [Thermosynechococcus elongatus BP-1] gi|22295487|dbj|BAC09313.1| diaminopimelate decarboxylase [Thermosynechococcus elongatus BP-1] Length = 450 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 58/407 (14%), Positives = 118/407 (28%), Gaps = 42/407 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ + A +L A K + + G +S Sbjct: 40 GSPLYILDEFTFRTACRQYQETLQRAYGGESLVLYASKAWNCLATCALAHSEGLGIDVAS 99 Query: 60 LYEVMLGHEKFGGETHAY--NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--- 114 E+ +H Y E+ L TI+ + +L + ++ Sbjct: 100 GGELYTALSAGVPASHIYFHGNNKSPQELLYALEVNCTIVADNWLELERLAAYVEEHDLS 159 Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNN 166 ++ LR+ P + S+ G + E GL H Sbjct: 160 TPPRVMLRLTPGIECHTHEYIRTGHLDSKFGFDPQQFPELLQFAKAHPELDWVGLHAHIG 219 Query: 167 CENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVK----DFCQRLK 219 + + + + + +++GGG+ + + + + Sbjct: 220 SQIFEEQPHLDLCDVLVDWLAQARAAMLPMRELNVGGGLGIRYVESDNPPAIAHWIKAIS 279 Query: 220 EFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVP 270 + Q +L EPG +IV TV + ++ + VD + + Sbjct: 280 HQLSQACQQRHLPLPKLICEPGRSIVGPAAVTAYTVGSRKVIPELRTYIAVDGGMSDNPR 339 Query: 271 DYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + A T V G+ C +GDI P++ D + Y Sbjct: 340 PMTYQAQYTALCANRMTTAATETVRVAGKHCESGDILLAHATLPPLQANDILVVASTGAY 399 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN------NLS 367 N + + +N + P + ++ +Y D LS Sbjct: 400 NYSMASNYNRVPRPAAVIVCDGEANLILQRETYADLVAHDVLPLRLS 446 >gi|291277619|ref|YP_003517391.1| putative carboxynorspermidine decarboxylase, NspC [Helicobacter mustelae 12198] gi|290964813|emb|CBG40669.1| putative carboxynorspermidine decarboxylase, NspC [Helicobacter mustelae 12198] Length = 404 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 126/396 (31%), Positives = 201/396 (50%), Gaps = 34/396 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+++++ LL NL+ I+K++G K+LLALK +A F ++QY+ GTT+S ++ Sbjct: 9 IPSPCYVLEEELLLGNLEILDSIQKSSGAKILLALKGYALHPSFSLISQYLSGTTASGIH 68 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN----------K 106 E LG E+FGG E ++ AYK E+ ++ IIFN+ +Q K Sbjct: 69 EARLGAEEFGGREKNKEVCVFSPAYKHQEMLDLIEIATHIIFNSFAQWQEFKPLIEQKNK 128 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLM 162 K ++GLR+NP S + +P SRLG + + + ++GL Sbjct: 129 IFRVENKQEIEVGLRLNPLYSEVTPPIYNPCISGSRLGINPSEFQKGVQSYGLEGISGLH 188 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE S ++ + E+ FG +I Q+ WI+ GGG H T K Y + +K+F Sbjct: 189 FHTHCEQNSDALARTLV-HFERHFGDYIPQMSWINFGGGHHITRKGYDLALLDGIIKDFR 247 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 ++Y+ ++LEPGEA+ + L V+D+ N ++ I+D S AH+PD L + Sbjct: 248 KRYNEVAVFLEPGEAVGWESGFLIGEVVDLIHNGMDIAILDVSATAHMPDCLEMPYRPRV 307 Query: 282 YPNT------------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 Y G SCLAGD+ G++ F+ ++ GDR+ FED+ Y I Sbjct: 308 RVLNRWGIHQDQGEDVAKYRYRFGGPSCLAGDVIGDYSFDVALQRGDRVIFEDMMHYTIV 367 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + N FNGI +P++ G ++ F Y DY N Sbjct: 368 KNNTFNGIPLPSLGKITNQG-FVLLKTFGYLDYKNR 402 >gi|325661240|ref|ZP_08149867.1| hypothetical protein HMPREF0490_00600 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472747|gb|EGC75958.1| hypothetical protein HMPREF0490_00600 [Lachnospiraceae bacterium 4_1_37FAA] Length = 423 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 61/391 (15%), Positives = 119/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N+ N G K A+K + L +Y G SS Sbjct: 20 PTPFHIYDERGIRENVRALKEAFSWNKGYKEYFAVKATPNPFLIQILREYGCGCDCSSYT 79 Query: 62 EVML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ G + + A E I + + ++ + + + I Sbjct: 80 ELMMSEAIGAVGEDIMFSSNATPAEEFVYADKLGGIINLDDFTHIDFLEKAIGHIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 R NP + N ++ G + ++ + ++ L + Sbjct: 140 CRYNPGGLFQISNDIMDNPGDAKYGMTTEQLFDAFRILKEKGAKHFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + K I++I+L GGI + + + E K + Sbjct: 200 YYPMLAKVLFEVAVKLQKETGVHIKFINLSGGIGIPYRPDQEPNDIHAIGEGVRKVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + K + D+ + + Sbjct: 260 LVPAGMGDVAIYTELGRFMMGPYGALVTRAIHEKHTHKEYIGCDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + GD + D + + Sbjct: 320 HITVMGKEDAPCDHKYDVTGSLCENNDKFAIDRMLPKIDTGDLLYIHDTGAHGFAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR + DYY Sbjct: 380 NGKLKSAELLLKEDGSVQMIRRAETPADYYA 410 >gi|153814493|ref|ZP_01967161.1| hypothetical protein RUMTOR_00707 [Ruminococcus torques ATCC 27756] gi|317500535|ref|ZP_07958757.1| diaminopimelate decarboxylase [Lachnospiraceae bacterium 8_1_57FAA] gi|331089366|ref|ZP_08338266.1| hypothetical protein HMPREF1025_01849 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847987|gb|EDK24905.1| hypothetical protein RUMTOR_00707 [Ruminococcus torques ATCC 27756] gi|316898045|gb|EFV20094.1| diaminopimelate decarboxylase [Lachnospiraceae bacterium 8_1_57FAA] gi|330405429|gb|EGG84964.1| hypothetical protein HMPREF1025_01849 [Lachnospiraceae bacterium 3_1_46FAA] Length = 424 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 67/391 (17%), Positives = 125/391 (31%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N+ N G K A+K + D L +Y G SS Sbjct: 20 PTPFHLYDEKGIRENVKALKEAFSWNKGYKEYFAVKATPNPFLIDILKEYGCGCDCSSYT 79 Query: 62 EVML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ E G + + E I + ++ ++ + + + I Sbjct: 80 ELMMSEALEITGEDIMFSSNDTPAEEFIYADKLGAIINLDDITHIDFLEQAIGHVPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFL 173 R NP + N ++ G + +E+ GL + Sbjct: 140 CRFNPGGLFKISNDIMDNPGDAKYGMTPEQILEAYKILKSKGAKEFGLHAFLASNTVTND 199 Query: 174 CFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + K + ++ I++I+L GGI K + + E K + Sbjct: 200 YYPMLAKVLFEQAVKLSKEAGVHIKFINLSGGIGIPYKPDQEPNDIYAIGEGVRKVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + KN + VD+ + + Sbjct: 260 LVPAGMGDVAIYTELGRYMMGPYGCLVTKAIHEKNTYKNYIGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F ++ GD + D + + Sbjct: 320 HITVLGKEDEPCDHKYDVTGSLCENNDKFAVDRMLPLIERGDYLVIHDTGAHGFAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + +G +K IR + DY++ Sbjct: 380 NGKLKSAELLLKENGEVKLIRRAETPADYFS 410 >gi|146319362|ref|YP_001199074.1| diaminopimelate decarboxylase [Streptococcus suis 05ZYH33] gi|146321567|ref|YP_001201278.1| diaminopimelate decarboxylase [Streptococcus suis 98HAH33] gi|253752391|ref|YP_003025532.1| pyridoxal-dependent decarboxylase [Streptococcus suis SC84] gi|253754217|ref|YP_003027358.1| pyridoxal-dependent decarboxylase [Streptococcus suis P1/7] gi|253756151|ref|YP_003029291.1| pyridoxal-dependent decarboxylase [Streptococcus suis BM407] gi|145690168|gb|ABP90674.1| putative diaminopimelate decarboxylase [Streptococcus suis 05ZYH33] gi|145692373|gb|ABP92878.1| putative diaminopimelate decarboxylase [Streptococcus suis 98HAH33] gi|251816680|emb|CAZ52321.1| pyridoxal-dependent decarboxylase [Streptococcus suis SC84] gi|251818615|emb|CAZ56449.1| pyridoxal-dependent decarboxylase [Streptococcus suis BM407] gi|251820463|emb|CAR47175.1| pyridoxal-dependent decarboxylase [Streptococcus suis P1/7] gi|292558994|gb|ADE31995.1| putative diaminopimelate decarboxylase [Streptococcus suis GZ1] gi|319758796|gb|ADV70738.1| putative diaminopimelate decarboxylase [Streptococcus suis JS14] Length = 415 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 63/388 (16%), Positives = 119/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 20 PTPFHLYDEKGIREKARALNAAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCATDV 79 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV++ + + + + E TI + + K+ A + LR Sbjct: 80 EVLMSEKLGFKDIMFTSNDTQAQEFVYARKVGATINLDAYEHIEFLKNVAGIPET-VCLR 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN----KS 171 NP +S + S+ G ++ G+ Sbjct: 139 YNPGGVFSLGTDIMDHPEESKFGMTKDQLMKGYKELKELGVKQFGIHAFLASNTVTNDYY 198 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------ 225 + + + + +++I+L GGI + + + E K Sbjct: 199 PVLARQLFELALEIREETGVTLDFINLSGGIGVNYRPEQEPNDIAVIGEGVRKVYEEILT 258 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 V+I+ E G ++ L T VL E + + VD+S + Sbjct: 259 PAGMGHVKIFTELGRFMLAPHGHLITKVLHRKETYRTYIGVDASAANLMRPAFYGAYHHI 318 Query: 281 IYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 V G C D F V++GD + D + + +NG Sbjct: 319 TNITRPDAPIEVVDVAGSLCENNDKFAVNRELPRVEVGDTLVIHDSGAHGFSMGYNYNGR 378 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + + DGT + IR + DY+ Sbjct: 379 LRSSEILLQEDGTARMIRRAETPEDYFA 406 >gi|295109827|emb|CBL23780.1| Diaminopimelate decarboxylase [Ruminococcus obeum A2-162] Length = 430 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 62/391 (15%), Positives = 119/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G K A+K + L +Y G SS+ Sbjct: 20 PTPFHLYDERGIRENAMALKEAFAWNKGFKEFFAVKATPNPYLIQILQEYGCGCDCSSMT 79 Query: 62 EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML G+ + + E I + ++ + + + K I Sbjct: 80 ELMLSKAIGCKKGDIMFSSNDTPEAEFRYANEIGGIINLDDITHIEAVEKAVGYIPKTIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N ++ G ++++ G+ Sbjct: 140 CRYNPGGLFKISNDIMDNPGDAKYGMTTDQIFEAFRILKAKGAEEFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + M + K + +I+L GGI + + + + E K + Sbjct: 200 YYPMLAKIMFELAVKLQKETGAHVGFINLSGGIGIPYRPEQTPNDIRVIGEGVRKVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + K + VD+ + + Sbjct: 260 LVPAGMGDVAIYTELGRFMMGPYGCLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + G C D F + +++GD + D + + Sbjct: 320 HITVMGKEDKPCDHLYDITGSLCENNDKFAIDRYLPEIEMGDLLVIHDTGAHGFAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+ + IR + DY+ Sbjct: 380 NGKLKSAEILLREDGSFEMIRRAETPRDYFA 410 >gi|320547384|ref|ZP_08041673.1| diaminopimelate decarboxylase [Streptococcus equinus ATCC 9812] gi|320447980|gb|EFW88734.1| diaminopimelate decarboxylase [Streptococcus equinus ATCC 9812] Length = 413 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 60/388 (15%), Positives = 117/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 19 PTPFHLYDEKGIREKARALNKAFSWNKGFKEYFAVKATPTPAILKILQEENCGVDCATEV 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+++ H+ + + E TI + + K+ A + LR Sbjct: 79 ELLMSHKLGFTDIMFSSNDTPAREFQYAKEIGATINLDAYEHIAFLKEVAGLPET-VSLR 137 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCEN----KS 171 NP +S N S+ G I+ +E G+ Sbjct: 138 YNPGGVFSLGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKYFGIHSFLASNTVTNDYY 197 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--- 228 + + + + +I+L GG+ + + + E + + Sbjct: 198 PELARQLFELAVEVKEKTGVSVSFINLSGGVGVNYRPEQKANDIAVIGEGVHRVFDEVLV 257 Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 PAGLGNVKIFTELGRFMLAPHGLLVTKVRHRKETYRTYIGVDASAVNLMRPAMYDAYHHI 317 Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 V G C D F + ++GD + D + + +NG Sbjct: 318 TNMTNPNGKLEVVDVVGSLCENNDKFAKQRELPQARVGDMLVIHDTGAHGFSMGYQYNGR 377 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + DG+ + IR + DY+ Sbjct: 378 LRSAEILYQEDGSARLIRRAETPEDYFA 405 >gi|33861646|ref|NP_893207.1| diaminopimelate decarboxylase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634223|emb|CAE19549.1| Diaminopimelate decarboxylase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 457 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 57/397 (14%), Positives = 119/397 (29%), Gaps = 35/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L N+ + + A K ++ M + + G + S Sbjct: 49 DSPLYVLDEITLRNSCKAYKKALEKYYPGPSLPIYASKANSSIFMSNLIASEGFGLDAVS 108 Query: 60 LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + E ++ D EI+ + N +I + L + ++ + + Sbjct: 109 EGELLTALKGGVPNEKIVFHGNNKSDKEIEFAIKNNIKVIVDNDHDLKRLEEISNSFNHD 168 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168 I + + P + S+ G + + + GL H + Sbjct: 169 IEIMVRFTPGIECHTHEYIRTGSFDSKFGFGIESLGRLFEVISKTKHIKLTGLHAHIGSQ 228 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------- 216 + + K + F I+ +++GGG+ + Sbjct: 229 IFELDPHNDLGKIMVDVILQAKDFGHNIKELNVGGGLGIKYTEEDDPPSIDEWIKTVSLS 288 Query: 217 RLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 +K + L EPG +IV+ + E VD + + Sbjct: 289 VVKACDKNNLNLPILMCEPGRSIVSTAGVTIYKIGSFKEIPGIRTYLSVDGGMSDNPRPI 348 Query: 273 LLYQES-----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + V G+ C +GD+ + K GD I YN Sbjct: 349 TYQSKYSACLVNNPLNSNSKNKYTVAGKHCESGDVLFKELELGDCKTGDLICVFGTGAYN 408 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + + S +D Sbjct: 409 NSMSSNYNRIPKPAAILVCNGEAEIIQKRESPHDLLK 445 >gi|251788371|ref|YP_003003092.1| diaminopimelate decarboxylase [Dickeya zeae Ech1591] gi|247536992|gb|ACT05613.1| diaminopimelate decarboxylase [Dickeya zeae Ech1591] Length = 420 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 118/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D ++ + + A K + + + Q S SL E+ Sbjct: 27 PLWAYDADTIIERIGQLRQFD-----TIRFAQKACSNLHILALMRQQGVKVDSVSLGEIE 81 Query: 65 LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + D + + + ++ L++ +++ + Sbjct: 82 RALAAGFEPGTDAHEIVFTADVLDDATLQRVHELNIPVNAGSIDMLHQLGERS--PGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G D ++ + G+ H + Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQALEALSRYRLKLIGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222 + + ++ +E IS GGG+ Y + + + Sbjct: 199 RHLEQVCDAMVQQVLAVGQDLEAISAGGGLSIPYRHGGERIDTQHYYGLWNRAREQIAGH 258 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V + +EPG +V + L V + ++ V+VD+ + + Sbjct: 259 LGHPVTLEIEPGRFLVAESGVLVAQVRVVKDMGSRHFVLVDAGFNDLMRPAMYGSYHHIT 318 Query: 282 Y--------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + + +V G C +GD+F E ++GD + F D Y Sbjct: 319 LLPGDGRDLSQSALHDTVVAGPLCESGDVFTQQAGGGVETLALPAAQVGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + +D Sbjct: 379 GASMSSNYNSRPLIAEVLFEQGQPRLIRRRQTLDDLLA 416 >gi|264680016|ref|YP_003279925.1| diaminopimelate decarboxylase [Comamonas testosteroni CNB-2] gi|262210531|gb|ACY34629.1| diaminopimelate decarboxylase [Comamonas testosteroni CNB-2] Length = 415 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 55/395 (13%), Positives = 109/395 (27%), Gaps = 45/395 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + A K + + + + + S E Sbjct: 18 GTPLWVYDAATIRERIAQLK-AFD----TVRFAQKACSNIHILKLMREQGVKVDAVSRGE 72 Query: 63 VMLGHE-----KFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLH 115 V+ FG + D A + + + ++ A Sbjct: 73 VLRALAAGFTPGFGEPADIVFTADVMDEATLATVV--EHQVPVNAGSIDMLHQLAAVSKG 130 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCEN 169 + LRINP + + S+ G D I++ + GL H Sbjct: 131 HHVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSELEVALDAIKAGGLVLAGLHMHIGSGV 190 Query: 170 KSFLCFSAMLKNIE--KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---- 223 ++ + + IS GGG+ K + Sbjct: 191 DYGHLQEVCGAMVKLVERTKAAGVDLHAISAGGGLSIPYKQGDATIDTNHYHGLWDAARK 250 Query: 224 ------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQ 276 +S+ + LEPG +V + L TV N + VD+ + + Sbjct: 251 QAEGIVGHSLGLELEPGRFLVAESGVLLGTVRATKNAGSNHFVLVDTGFNELMRPSMYGS 310 Query: 277 ESATIYPNT-----GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 ++V G C +GD+F + +GD + D Sbjct: 311 YHGMEVLRRDGQSLPAQDSVVAGPLCESGDVFTQGDGGVVLPRSLAGASVGDLLVIHDTG 370 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 Y + + +N + + + + R + Sbjct: 371 AYGSSMSSNYNTRPLAAEVLVDGAQSQLIRRRQTV 405 >gi|295700590|ref|YP_003608483.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1002] gi|295439803|gb|ADG18972.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1002] Length = 422 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 56/403 (13%), Positives = 109/403 (27%), Gaps = 48/403 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + A K + + + + SL E Sbjct: 21 GTPLWVYDADTIRQRIAQLRSFD-----TIRYAHKACSNVHILKLMRDEGVMVDAVSLGE 75 Query: 63 VMLGHEKF---------GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQ 112 + E + D A + + ++ L++ A Sbjct: 76 LARSFAAGFTAQPASHDAAEGVVFTADVLDHATLATVLEERITVNAGSLDMLDRLGRHAS 135 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNN 166 + ++ LRINP + + S+ G D + + GL H Sbjct: 136 E-GHRVWLRINPGFGHGHSSKTNTGGEHSKHGIWRDDLPRALELVRRYRLKLVGLHMHIG 194 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSE-- 223 + + + + IE IS GGG+ P D + + + Sbjct: 195 SGVD-YAHLAKVCDAMVDAVSQLDQDIEAISAGGGLSVPYRDGEPSVDTAHYFRLWDDAR 253 Query: 224 -------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLY 275 + V++ +EPG +V L V ++ + D+ V Sbjct: 254 RRIEAQVGHRVRLEIEPGRFLVAQAGVLIAEVHALNRRPSRQFALLDAGFNDLVRPSFYG 313 Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFE 321 V G C AGD+F + ++GD + F Sbjct: 314 SHHEISVLRRDGTPSDAPIGSFSVAGPLCEAGDVFTQVEGGVVTSRSMPAPQVGDLLVFH 373 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 D Y + + +N + + R + Sbjct: 374 DAGAYGASMSSNYNSRPLAPEVLIERGNARLIRRRQRIEELIA 416 >gi|323141339|ref|ZP_08076232.1| putative diaminopimelate decarboxylase [Phascolarctobacterium sp. YIT 12067] gi|322414188|gb|EFY05014.1| putative diaminopimelate decarboxylase [Phascolarctobacterium sp. YIT 12067] Length = 429 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 58/391 (14%), Positives = 110/391 (28%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+ + N G K A+K + L + G SS Sbjct: 21 PTPFHLYDEAGIRRTARLVNKAFSWNKGFKEYFAVKATPNPYLLQILREEGCGADCSSYT 80 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ F ++ + I + ++ ++ + A Sbjct: 81 ELLMSDAVGFKESEIMFSSNATPAEDFKLARKLNVNINLDDITHIDFLEKVADIPETVCC 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCEN 169 + D ++ G + IE+ K V H Sbjct: 141 RYNPGGHFAIANNIMDNPG-DAKYGMTHEQIIEAYKILKSKGVKNFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + I +I+L GGI K + + E K ++ Sbjct: 200 YYPELARILFELAVELKEKTGAHISFINLSGGIGIAYKPEQQDNDVLAIGEGVRKVFEEV 259 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G ++ L TT + K + D+ + + Sbjct: 260 LVPAGMGDVKLFTELGRYMLAPNGALVTTAIHQKHIYKEYIGCDACAANLMRPAIYGSYH 319 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGD + D + + + Sbjct: 320 HISVMGKENAPCDHKYDVTGGLCENNDKFAVDRMLPEINIGDLLFIHDAGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG++K IR + DY+ Sbjct: 380 NGKLRSAELLLQEDGSVKMIRRAETPADYFA 410 >gi|300868260|ref|ZP_07112890.1| diaminopimelate decarboxylase [Oscillatoria sp. PCC 6506] gi|300333742|emb|CBN58074.1| diaminopimelate decarboxylase [Oscillatoria sp. PCC 6506] Length = 470 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 120/398 (30%), Gaps = 37/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L K ++L A K ++ + + G S Sbjct: 61 GSPIYILDEVTLRTACRQYREALKRYYPGESQVLYASKAWSCMAVCAIASSEGLGIDVVS 120 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTV----SQLNKFKDKAQK 113 E+ ++ K + I+ + + + +++A + Sbjct: 121 GGEIFTALQAGVSPNKLYFHGNNKSRSELELAIESGCTIVADNWLELSTLVEILENRATQ 180 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNN 166 + + LR P + S+ G D + GL H Sbjct: 181 PVRVM-LRFTPGIECHTHEYIRTGHLDSKFGFDPNDLDRVFAFLSKQPSLSCIGLHAHIG 239 Query: 167 CENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----- 218 + + I + F H+ + +++GGG+ + + + Sbjct: 240 SQIFELQPHEDLAGVIAEAFVKASHYGLPVGELNVGGGLGISYTEADDPPSIEAWVKVIG 299 Query: 219 ------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVP 270 + E ++ EPG +++ + TV + ++ + VD + + Sbjct: 300 ESVAAACQKLEIPLPKLLCEPGRSLIGSACVTAYTVGSKKVIPGMRTYLAVDGGMSDNPR 359 Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + N T + G+ C +GDI + K GD + Y Sbjct: 360 PITYQSVYRVVAANQMSAPLTETVTIAGKHCESGDIVIKNAQLPVSKPGDVLVVMATGAY 419 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + +N + PT + I+ +Y D Sbjct: 420 NYSMASNYNRLPRPTAVLVRDGEANVIIQRETYQDLLR 457 >gi|116491950|ref|YP_803685.1| diaminopimelate decarboxylase [Pediococcus pentosaceus ATCC 25745] gi|116102100|gb|ABJ67243.1| diaminopimelate decarboxylase [Pediococcus pentosaceus ATCC 25745] Length = 430 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D + N + ++ G++ + A K F+ ++ + Q + S Sbjct: 27 GTPLQVFDVTMIRNQIQAFQKEFEDRGIRGIVSYASKAFSCKAIYQVVKQEHAHSDVVSG 86 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F + +++ K AV TII + +L + + + Sbjct: 87 GEIATALAAGFPSTSLSFHGNNKSLAELNFAVQKGVGTIILDNFHELELLDQVLNENNTQ 146 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEI-------KNVNGLMFHNN 166 I LR+ P VS + S+ G +++ ++ G+ H Sbjct: 147 IDVLLRVTPGVSAHTHSYIQTGQTDSKFGFDIDSGQALKAMRLSQNNPRIHLRGIHAHIG 206 Query: 167 CENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F +K + + + +++GGG + L Sbjct: 207 SQIFEVTGFKLEVKKLVNLLTNWSQKYQFTADILNIGGGFGIKYTHADDPLAPELLLGEI 266 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269 + I++EPG +IV T+ + V VD + ++ Sbjct: 267 LDELQVQYSKLGQPIPTIWIEPGRSIVGPAGFSLYTIGSRKDVPGLSPYVAVDGGMGDNI 326 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L + + T + G+ C +GDI K GD + Sbjct: 327 RPALYQADYEAVLAENPNQPPIETVRLAGKFCESGDILINHLPLPTTKTGDVLVMLATGA 386 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + I+ +Y D N Sbjct: 387 YGYSMASNYNRNPRPAVVFAENSQAQLVIQRETYADMIQN 426 >gi|157148390|ref|YP_001455709.1| diaminopimelate decarboxylase [Citrobacter koseri ATCC BAA-895] gi|157085595|gb|ABV15273.1| hypothetical protein CKO_04214 [Citrobacter koseri ATCC BAA-895] Length = 420 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 118/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L++ + ++ Sbjct: 82 RALAAGYDPQNHPDDIVFTADVIDAATLARVSELRIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G D + + G+ H + Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWHTDLPAALAVMQRHRLQLVGVHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + ++ F +E IS GGG+ Y R + Sbjct: 199 GHLEQVCGAMVRQVIDFGQDLEAISAGGGLSIPYHEGEEAVDTQHYFGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHRVKLEIEPGRFLVAQSGVLVTQVRSVKEMGRRHFVLVDAGFNDLMRPAMYGSYHHIT 318 Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRSLEHAPLLDTVVAGPLCESGDVFTQQEGGNVETRALPAVAPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGKARLIRRRQTIEELLA 416 >gi|329961124|ref|ZP_08299379.1| diaminopimelate decarboxylase [Bacteroides fluxus YIT 12057] gi|328532062|gb|EGF58872.1| diaminopimelate decarboxylase [Bacteroides fluxus YIT 12057] Length = 386 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 123/365 (33%), Gaps = 26/365 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L K + A+K A + + + G S Sbjct: 13 LRTPFYYYDTKVLRDTLSCIRTEASKYDNYSVHYAVKANANPKVLTIIRENGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + K + + D FN +V +L A + Sbjct: 73 GEIRAAIKAGFPSGKIVFAGVGKADWEINLGLDYDIFCFNVESVPELEVINGLAAAKGKV 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-----EIKNVN--GLMFHNNCE 168 + RINP+V ++ G +D E+ NV GL FH + Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMQDMDHVIDVAGEMNNVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218 F+ + ++ + +IE I++GGG+ + F Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARRIRIEHINVGGGLGIDYAHPNRQAIPDFKKYFIAYD 252 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 + + ++ E G ++V +L + VL + + + D+ + + L Sbjct: 253 EHLKLRSYQTLHFELGRSVVGQCGSLISRVLYVKQGTNKQFAILDAGMTDLIRPALYQAF 312 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + T V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKIENITSDAPMQTYDVVGPICESSDVFGKAIDLNGVKRGDLIALRSAGAYGEIMASGYN 372 Query: 336 GINMP 340 +P Sbjct: 373 CRELP 377 >gi|66825991|ref|XP_646350.1| group IV decarboxylase [Dictyostelium discoideum AX4] gi|60474341|gb|EAL72278.1| group IV decarboxylase [Dictyostelium discoideum AX4] Length = 421 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 58/394 (14%), Positives = 112/394 (28%), Gaps = 30/394 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP+++ + K+ N + + K + A+K + L + G SSL Sbjct: 26 PTPFHIYNGDKIKENGELLMNSFKKYFPNYRNYFAVKATPNPSILKLLKEIGMGVDCSSL 85 Query: 61 YEVMLG-HEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E++L F E + K E I + +Q+ + + ++ Sbjct: 86 AELILSEKVGFKNEEIMFTSNNTKSEEYKKAYELGSIINLDDYTQIEYLYESLGGVMPEL 145 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172 K N ++ G D ++ K GL Sbjct: 146 ISFRYNPGPLKKGNDIIGNPKDAKFGLTSDDLEKAYNKAKELGVKRFGLHCMVASNELDL 205 Query: 173 LCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPV------------KDFCQ 216 F + + E ++LGGGI + + + + Sbjct: 206 DYFEETARLLFSTISKLTKSCGITFEMVNLGGGIGIPYRPNQIAVDYLKLTEKISNAYKE 265 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276 + E + + E G I L T + K + VD+ + + + Sbjct: 266 LIVEEEGLPKLNVVTECGRVITGPYGVLVTKAIHSKSTYKEYIGVDACMVNLMRPGMYGA 325 Query: 277 ESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 N T V G C D F + GD + D + + Sbjct: 326 YHHITVLNPTDPNSTETYDVVGSLCENNDKFCIDRSLPKIHRGDTLVIHDTGAHGHSMGF 385 Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 +NG + + R +++D ++ L Sbjct: 386 NYNGKLRSAEYLLLNNSINCIRRAETFDDLFSTL 419 >gi|298245000|ref|ZP_06968806.1| diaminopimelate decarboxylase [Ktedonobacter racemifer DSM 44963] gi|297552481|gb|EFH86346.1| diaminopimelate decarboxylase [Ktedonobacter racemifer DSM 44963] Length = 447 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 58/405 (14%), Positives = 125/405 (30%), Gaps = 42/405 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN----AGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 TP Y+ D+ + + + + V++L A K + + + + + G Sbjct: 39 GTPLYIFDRATIAHACQRYFQAFERYYQASAVRILYASKAYLSPLVARIIAEQDMGLDIV 98 Query: 59 SLYEVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E+ + F E +++ K A+ II + S+L + A +L Sbjct: 99 SGGELTVAQRAGFPMERISFHGNNKSTVELKLALQLGVGRIILDNWSELERLTHLADELG 158 Query: 116 KKI--GLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFH 164 ++ LR+ P V S+ G + + + ++ GL H Sbjct: 159 QRPAVLLRVAPGVETDTHRYLQTGHAASKFGFPLQNGEAKTAILRILGEDKLHLVGLHAH 218 Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFITQIEWI--------SLGGGIHFTDKDYPVKDFCQ 216 + + + L ++ + +W G + Q Sbjct: 219 SGTMLRETRPYEECLVHLLSLAKAIYDETQWWPEEVSPGGGWGIDTPDQLGTPGLDQLAQ 278 Query: 217 RLKEFSEKY----------SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSS 264 L+ + + + LEPG +IV + + + VD Sbjct: 279 ALQHQMQVMLASISNGTLPAPTLILEPGRSIVARAGVALYRIGALKATPAGTTYLFVDGG 338 Query: 265 VEAHVPDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + ++ L + G V GR C +GD+ + ++ G+ + Sbjct: 339 MADNIRPALYHALYTALPVEHISVPGSVDYCVSGRYCESGDMLIDNVRLPAMREGELLLL 398 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + P + + R +Y+D Sbjct: 399 PLAGAYCLPMASNYNLVPRPGVLLVEEGRVQVMERRETYDDILAR 443 >gi|327470417|gb|EGF15873.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK330] Length = 416 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 55/392 (14%), Positives = 117/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169 V + D ++ G I++ + G+ Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHAFLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKKTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F +IGD + D ++ + +N Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHSFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + D ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDDNVRMIRRAEKPEDYFATL 409 >gi|311278213|ref|YP_003940444.1| diaminopimelate decarboxylase [Enterobacter cloacae SCF1] gi|308747408|gb|ADO47160.1| diaminopimelate decarboxylase [Enterobacter cloacae SCF1] Length = 420 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 117/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + V + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAQL----GRFDV-VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + A + Sbjct: 82 RALAAGYAPQTHPDDIVFTADVIDEATIARVSELRIPVNAGSVDMLAQLG--AVSPGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ N+ G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYSDLPAALAVIQRYGLNLIGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + ++ F ++ IS GGG+ Y R + Sbjct: 199 GHLEQVCGAMVRQVIDFGQDLQAISAGGGLSIPYREGEEAIDTDHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V++ +EPG +V L + V + ++ V++D+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAEAGVLVSQVRSVKQMGSRHFVLIDAGFNDLMRPAMYGSYHHIT 318 Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRDLTLAPLVETVVAGPLCESGDVFTQQEGGKVETRALPQVAPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLYDNGSARLIRRRQTIQELLA 416 >gi|282859249|ref|ZP_06268370.1| diaminopimelate decarboxylase [Prevotella bivia JCVIHMP010] gi|282587982|gb|EFB93166.1| diaminopimelate decarboxylase [Prevotella bivia JCVIHMP010] Length = 383 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 69/372 (18%), Positives = 131/372 (35%), Gaps = 26/372 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I+TP+Y D L + L T I K+ G + A+K A + + + +Y G S Sbjct: 11 IETPFYYYDSDILRHTLRTISEEISKHIGFHVHYAIKANANPDVLNIIKEYNLGADCVSG 70 Query: 61 YEVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116 E+ + F + Y K + + D FN ++ +L + A+K K Sbjct: 71 GEIERSINSGFPAKKVVYAGVGKADWEIELALDYDIFCFNVESLEELAIINEIAEKKEKI 130 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168 K+ RINP+V ++ G +D ++ + GL FH + Sbjct: 131 AKVCFRINPNVVAHTHASITTGLAENKFGIALQDIHKAIKVAKALKNIEFIGLHFHIGSQ 190 Query: 169 NKSFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------RL 218 F + I+ + +++ I++GGG+ + Sbjct: 191 ILDMDDFIALCNRINEIQDDLEVKGIKLKIINVGGGLGIDYNNPSENLIPNFKLYFDTYA 250 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 K + +++ E G ++ +L T VL I + + D+ + V L Sbjct: 251 KYLQLREGQEVHFELGRSVTGQMGSLITKVLYIKHSSTKKFAILDAGMTDLVRPALYQAH 310 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + T V G C + DIF + + GD ++ + Y + +N Sbjct: 311 HKIINLSSTEVKETYDVVGPICESSDIFAKDILLPKLHRGDYVALQSAGAYGEIMASQYN 370 Query: 336 GINMPTIAVKNV 347 +P + + Sbjct: 371 CRKLPIGYLSDK 382 >gi|261346253|ref|ZP_05973897.1| diaminopimelate decarboxylase [Providencia rustigianii DSM 4541] gi|282565561|gb|EFB71096.1| diaminopimelate decarboxylase [Providencia rustigianii DSM 4541] Length = 419 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 57/400 (14%), Positives = 119/400 (29%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + ++ + + + A K + + + S SL E Sbjct: 25 GTPVWVYDSEVIVERIKQLQ-LFD----TVRFAQKASSNIHILRLMRTQGVKVDSVSLGE 79 Query: 63 VMLGH-EKFGGET----HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + F + D ++ D + ++ L + + K Sbjct: 80 IERALVAGFQPGRAKSEIVFTADVLDPATLHKVTELDIPVNAGSIDMLKQIGE--YKAGH 137 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 + LRINP + + S+ G D I + G+ H Sbjct: 138 PVWLRINPGFGHGHSQKTNTGGENSKHGIWHHDLPEALAIIRQYNLKLVGIHMHIGSGVD 197 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224 + + + + + I+ IS GGG+ ++ Sbjct: 198 -YQHLANVCDAMVELVISAGVDIDAISAGGGLSTPYREQDELIDVAHYYSLWNSARQRIE 256 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279 + +++ +EPG +V + L V + + ++ V+VDS + + Sbjct: 257 QHLGHKIELEIEPGRYLVAESGVLLAQVRAVKNMGSRHYVLVDSGFNDLMRPAMYGSYHH 316 Query: 280 --------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVA 324 N ++ G C +GD+F E VK+GD + F D Sbjct: 317 ISVLPANGNSVENQPLKETIIAGPLCESGDVFTQLEGGMVETRLLPDVKVGDFLVFHDTG 376 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + R + + Sbjct: 377 AYGASMSSNYNSRPLLPEVMFVDGKPTLIRRRQTIQELLA 416 >gi|301103215|ref|XP_002900694.1| diaminopimelate decarboxylase, putative [Phytophthora infestans T30-4] gi|262101957|gb|EEY60009.1| diaminopimelate decarboxylase, putative [Phytophthora infestans T30-4] Length = 410 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 50/379 (13%), Positives = 108/379 (28%), Gaps = 31/379 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+Q + +N L + + A+K + L+Q G SS Sbjct: 21 GTPLQIYDEQLIRDNARRLLTAFRAHFPDFQQFYAVKALPNPAILKLLHQEGCGMDCSSS 80 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116 E+ + E G+ + + + + VS ++ Sbjct: 81 AELHIVKELGVPGDQVIFTSNFTAKNDLGTAFDQGVIMNLDDVSLVDSLVAVRGKCPELM 140 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENK 170 L + S+ P ++ G +E+ K G+ Sbjct: 141 SFRLNPGIGRTDSETKSNVLGGPDAKFGVPPFQIVEAYRKAQQAGAKGFGIHMMTGSCVM 200 Query: 171 SFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224 + + + + + E++++GGG+ ++ + + + + Sbjct: 201 NQEYWRETVTVLFNTIVQLKKELGIEFEFMNIGGGLGIPYREDQEPVNVEAIAKMLREVF 260 Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274 ++ +E G + L T I E VD+ + + + Sbjct: 261 DEAVKEHGLQTLPRLCMENGRFMTGPFGWLVTRCEAIKETYGRYYGVDACMAHLMRPGMY 320 Query: 275 YQESATIYPNTGPYTA---MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 P V G C D F + ++GD D ++ + Sbjct: 321 GAFHHISIPARANEEVSPSHVVGTLCENNDWFAKDRPLPKAQVGDLFVIHDTGAHSHSMG 380 Query: 332 NWFNGINMPTIAVKNVDGT 350 +NG + DG+ Sbjct: 381 FQYNGKLRAPEVLLRADGS 399 >gi|306830172|ref|ZP_07463356.1| diaminopimelate decarboxylase [Streptococcus mitis ATCC 6249] gi|304427698|gb|EFM30794.1| diaminopimelate decarboxylase [Streptococcus mitis ATCC 6249] Length = 418 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 115/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNEGFKEYFAVKATPTPAILKILKEEGCGVDCSSYV 78 Query: 62 EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ G E + D E TI + + + A Sbjct: 79 ELLMSHKLGFVGPEIMFSSNNTPDQEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTRDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELSRQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAMIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 LTPVGLGQVKIFTELGRFMLAPHGVLVTKVTHKKKTYRTYLGVDASAVNLIRPAMYGAYH 317 Query: 279 A--TIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HVTNLTHPDGPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|237801879|ref|ZP_04590340.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024737|gb|EGI04793.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 419 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 62/383 (16%), Positives = 125/383 (32%), Gaps = 29/383 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+++ D++ ++ ++ + A+K + L + G SS E Sbjct: 23 PTPFHIYDERAIVQTHRHVAQAFADSAFRQYFAVKALPTPAILSLLLKEGSGLDCSSPVE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +ML G+ + E L I F+ S L + + ++ Sbjct: 83 LMLAKRLGARGDDIVFTSNNTSLSEYQMALQAGALITFDDRSMLEQVVALPDIVAFRVSP 142 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI---------KNVNGLMFHN-NCENK 170 + S N S+ G + ++S ++G+M N Sbjct: 143 HGVIARSSQ-----MGNAQQSKFGIPEAELVQSYREAWDRGARRFGIHGMMCANELSLEA 197 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFS 222 + +++ + ++E+I++GGG+ + + LK+ Sbjct: 198 AVQAGVQVIEVGARVAREASIELEYINIGGGLGIPYRIDDQALDLTAYADALKRALKQAF 257 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + ++ +E G I L + V++ + +V +D+S+ A + L Sbjct: 258 PHNTPKLLMELGRYISGPHGVLVSRVINRCSKGREIVGLDASMSALMRPGLYGAYHHLTL 317 Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P V G C D F IGD D + +NG Sbjct: 318 PFADQRPEGVFDVVGALCENFDKFAVDRPLPSPLIGDLALIHDTGAHGHAMGFTYNGRLR 377 Query: 340 PTIAVKNVDGTI-KAIREFSYND 361 P + DG I + R +++D Sbjct: 378 PAELMLTDDGDIVEIRRAETFDD 400 >gi|94984897|ref|YP_604261.1| diaminopimelate decarboxylase [Deinococcus geothermalis DSM 11300] gi|94555178|gb|ABF45092.1| diaminopimelate decarboxylase [Deinococcus geothermalis DSM 11300] Length = 385 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 60/374 (16%), Positives = 118/374 (31%), Gaps = 25/374 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D +L L ++ A+K + L G S E Sbjct: 16 GTPLYVYDAAELDAALARVRAAFGE--ARVFYAMKANPNLTLLRRLRAAGVGFECVSAGE 73 Query: 63 VMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + G A E A T+I + ++ K + Sbjct: 74 IARAEHVGASGDALLINGPAKSAQEYAAGAQLGATLIVDRAEEVGLL-----PPRSKALV 128 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 R+NP+++ S S+ G + + + + GL H + Sbjct: 129 RVNPALAVSTHDHLATGAAGSKFGVTLEQAPDVLRALRAAGHDARGLHVHIGSAIREAAD 188 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 FSA + + +E + +GGG + + + + + Q+++EPG Sbjct: 189 FSAAFARVAELRPQTG-NLEVLDVGGGWSVGA---DLPGIAREARAAAAVFGAQLWVEPG 244 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----- 289 +V TL T V+ +N ++ D+ + + L + P Sbjct: 245 RYLVAQAGTLLTRVVGTKRTGRNFLLTDAGMTELLRPMLYGAQHPVTALWDDPQPETAGE 304 Query: 290 -AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 V G +C +GD+ GD ++ + Y + + + + P A+ + Sbjct: 305 RWDVAGPACESGDLLARDVCLPSPHPGDLLAIAEAGAYGASMSSSYLTRSRPAEALWDGS 364 Query: 349 GTIKAIREFSYNDY 362 I R + + Sbjct: 365 DWILIRRRETPQEL 378 >gi|333030136|ref|ZP_08458197.1| diaminopimelate decarboxylase [Bacteroides coprosuis DSM 18011] gi|332740733|gb|EGJ71215.1| diaminopimelate decarboxylase [Bacteroides coprosuis DSM 18011] Length = 386 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 120/368 (32%), Gaps = 26/368 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP+Y D L LDT K K+ ALK + + + G S Sbjct: 13 LDTPFYYYDTCLLQETLDTVKLQLKGQDQFKVHYALKANVNSEILQMIRKNGFGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F E + K + + FN ++ +L + A Sbjct: 73 GEIRAAIQAGFKPENIVFAGVGKSDWEIELGLDLGIFCFNVESIPELEIINELALNMGKR 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168 ++ LRINP+V + + ++ G D + + GL FH + Sbjct: 133 AQVCLRINPNVKANTHANIATGQAENKFGISLHDLDKVMECVKQLKAIDFVGLHFHIGSQ 192 Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQ-------RL 218 F A+ + + +I I++GGG+ + Sbjct: 193 ILDMADFRALCNRVNELLDRLEGRGIRIPHINVGGGLGIDYAHPNRQAIPNFESYFDVYD 252 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275 + ++ E G ++V +L + VL + E + D+ + + L Y Sbjct: 253 THLRIRSYQTLHFELGRSLVGQCGSLISRVLYVKEGTNKKFAILDAGMNDLIRPALYQAY 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + + V G C + D+FG+ V GD ++ Y + +N Sbjct: 313 HKIENLSSDEALEAYDVVGPVCESSDVFGKSIDLNKVSRGDFMAIRSAGAYGEVMASTYN 372 Query: 336 GINMPTIA 343 ++P Sbjct: 373 CRSLPNAY 380 >gi|290476309|ref|YP_003469213.1| diaminopimelate decarboxylase, PLP-binding [Xenorhabdus bovienii SS-2004] gi|289175646|emb|CBJ82449.1| diaminopimelate decarboxylase, PLP-binding [Xenorhabdus bovienii SS-2004] Length = 427 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 55/405 (13%), Positives = 119/405 (29%), Gaps = 51/405 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D ++ ++ + A K + + + + SL E Sbjct: 27 GTPLWVYDSDIIIRKINRLKRFD-----IIRFAQKACSNTHILSLMRAQGVKVDAVSLGE 81 Query: 63 VMLGH-----EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + + D + D + ++ L + + + Sbjct: 82 IERALYAGYQPGRDRSEIVFTADLIDEITLNRVIELDIPVNVGSIDMLEQIGTR--QSGH 139 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 I LRINP + + S+ G +D + + GL H Sbjct: 140 PIWLRINPGFGHGHSQKTNTGGENSKHGIWFQDLPLAIEKVRQYGLKLVGLHMHIGSGVD 199 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224 + + + + ++ I+ IS GGG+ K + K Sbjct: 200 -YQHLANVCNAMVEQVISCGEDIQAISAGGGLSIPYKTGDEIVDTEHYYSLWHKARQRIE 258 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279 + V++ +EPG +V + L V + ++ V+VD+ + + Sbjct: 259 RHLGHHVELEIEPGRFLVAESGILMAEVRAVKPMGSRHYVLVDAGFNDLMRPTMYGSYHH 318 Query: 280 T-------------IYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRIS 319 + + + +V G C +GD+F + V +GD + Sbjct: 319 ISVLSVNSQHIDEAVSQDAELHETLVAGPLCESGDVFTQSAGGDVVPRLLPRVCVGDYLI 378 Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 F D Y + + +N + + R + + Sbjct: 379 FHDTGAYGASMSSNYNSRPLIPEILFIEGDARLIRRRQTIEELLA 423 >gi|153813582|ref|ZP_01966250.1| hypothetical protein RUMOBE_04004 [Ruminococcus obeum ATCC 29174] gi|149830327|gb|EDM85419.1| hypothetical protein RUMOBE_04004 [Ruminococcus obeum ATCC 29174] Length = 430 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 66/391 (16%), Positives = 120/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G K A+K + L +Y G SS+ Sbjct: 20 PTPFHLYDEKGIRENAKALKEAFAWNKGFKEFFAVKATPNPYLIQILQEYGCGCDCSSMT 79 Query: 62 EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML G+ + + E I + ++ + + + K I Sbjct: 80 ELMLSKAIGCKKGDIMFSSNDTPEAEFRYANEIGGIINLDDITHIKAVEKAVGYIPKTIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 R NP + N ++ G + E+ E ++ L + Sbjct: 140 CRYNPGGVFKISNDIMDNPGDAKYGMTTEQIFEAFRTLKAKGAENFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + M + K I +I+L GGI + + + + E K + Sbjct: 200 YYPMLAKVMFELAVKLQKETGAHIGFINLSGGIGIPYRPDQTPNDIRVIGEGVRKVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + K + VD+ + + Sbjct: 260 LVPAGMGDVAIYTELGRFMMGPYGCLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + G C D F + + +GD + D + + Sbjct: 320 HITVMGKEDQPCDRLYDITGSLCENNDKFAIDRYLPKIDMGDLLVIHDTGAHGFAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + + DGT IR + DY+ Sbjct: 380 NGKLKSAEILLHEDGTFDMIRRAETPRDYFA 410 >gi|91212236|ref|YP_542222.1| diaminopimelate decarboxylase [Escherichia coli UTI89] gi|117625090|ref|YP_854078.1| diaminopimelate decarboxylase [Escherichia coli APEC O1] gi|218559850|ref|YP_002392763.1| diaminopimelate decarboxylase [Escherichia coli S88] gi|237706500|ref|ZP_04536981.1| diaminopimelate decarboxylase [Escherichia sp. 3_2_53FAA] gi|91073810|gb|ABE08691.1| diaminopimelate decarboxylase [Escherichia coli UTI89] gi|115514214|gb|ABJ02289.1| diaminopimelate decarboxylase [Escherichia coli APEC O1] gi|218366619|emb|CAR04373.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli S88] gi|226899540|gb|EEH85799.1| diaminopimelate decarboxylase [Escherichia sp. 3_2_53FAA] gi|294490323|gb|ADE89079.1| diaminopimelate decarboxylase [Escherichia coli IHE3034] gi|307625570|gb|ADN69874.1| diaminopimelate decarboxylase [Escherichia coli UM146] gi|315289397|gb|EFU48792.1| diaminopimelate decarboxylase [Escherichia coli MS 110-3] gi|323951704|gb|EGB47579.1| diaminopimelate decarboxylase [Escherichia coli H252] gi|323957422|gb|EGB53144.1| diaminopimelate decarboxylase [Escherichia coli H263] Length = 420 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 56/393 (14%), Positives = 114/393 (29%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V++ +EPG +V L T V + ++ V+VD+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E VK D + D Y Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKACDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + + +N + + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|240103377|ref|YP_002959686.1| Diaminopimelate decarboxylase (lysA) [Thermococcus gammatolerans EJ3] gi|239910931|gb|ACS33822.1| Diaminopimelate decarboxylase (lysA) [Thermococcus gammatolerans EJ3] Length = 411 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 73/380 (19%), Positives = 129/380 (33%), Gaps = 31/380 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y+ + ++ +N K AG + + A+K + + + G ++S Sbjct: 31 GTPVYIYNLGRIRDNYLRMTDALKKAGFREWRIHYAMKANNNREVLGLIRELGGGIDATS 90 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKD-------- 109 EV L E F + + I F+++S L +F Sbjct: 91 PGEVKLAREIGFEDDDIIFTGTSLSNGDLEFLAKTKVLINFDSISSLRRFNGEEGRKVGL 150 Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169 + + + + + ++ D IE + ++ L H + Sbjct: 151 RINTGVGIGRVEKTTTGGLEAGSIPVKFGISGKAIDRAFDLIEEKGFELHCLHHHVGSDW 210 Query: 170 ------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLK 219 + F +LK EK F +E I LGGG +++PV +F QR+K Sbjct: 211 VGEKIGRYFQALDNLLKVAEKAEARFGGSVEVIDLGGGYGVPHSAEEEEFPVYEFFQRVK 270 Query: 220 EFSEKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276 E E+Y ++ +EPG +V++ L V + E + + + LY Sbjct: 271 EHMEEYGFGDLKVIVEPGTYLVSDAGILVAQVNTVEEKNGRIFVGVDAGLNVFNSPALYN 330 Query: 277 ESATIYPN-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 I A V G C +GDIF ++ GD I+ + Y Sbjct: 331 YYHEIVVCNRVSSEEKMVATVVGNICESGDIFAVDRELPKIEEGDYIAILNAGAYGYVMA 390 Query: 332 NWFNGINMPTIAVKNVDGTI 351 N +N V +I Sbjct: 391 NNYNLRPKGKEVVVGRSRSI 410 >gi|332878366|ref|ZP_08446090.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683691|gb|EGJ56564.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 386 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 121/365 (33%), Gaps = 26/365 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L LDT KN + A+K A + ++ G S Sbjct: 13 VRTPFYYYDTELLRKTLDTIKAETGKNDNYHVHYAVKANANRKLLRIISAAGFGADCVSG 72 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK 117 E+ F E + K V + ++ +L A + K Sbjct: 73 GEIKACLDAGFPAEKIVFAGVGKSDWEINVGLDAGIAYFNVESIPELEVINQLAGEKDKI 132 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 RINP V ++ G D + GL FH + Sbjct: 133 ARVSFRINPDVGAHTHANITTGLAENKFGIAMADMEKVIEIAASLKHVEFVGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFS 222 F+ + ++ + ++ I++GGG+ + PV F + + Sbjct: 193 ILEMGDFVALCNRVNELQAQLERHHITVKNINVGGGLGIDYQHPNEVPVPHFADYFQTYR 252 Query: 223 EKYS----VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277 + + Q++ E G A+V +L T VL + + K IVD+ + + L Sbjct: 253 KHLNLRPDQQLHFELGRAVVGQCGSLITRVLYVKQATYKQFAIVDAGMTDLIRPALYQAF 312 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + T V G C + D+F + GD ++ Y + +N Sbjct: 313 HSIENLSSDERKETYDVVGPICESSDVFVKAFDLNRCHRGDLLALRSAGAYGEIMASRYN 372 Query: 336 GINMP 340 +P Sbjct: 373 CRELP 377 >gi|241667894|ref|ZP_04755472.1| diaminopimelate decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876434|ref|ZP_05249144.1| diaminopimelate decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842455|gb|EET20869.1| diaminopimelate decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 394 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 58/372 (15%), Positives = 117/372 (31%), Gaps = 30/372 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D L + +A ++ A+K + + + G S Sbjct: 23 TPCYIYDSTLLEDTFASAKKALDKNFKNAEIHYAIKANHHPKIVNIAKKNGMGIDCVSGG 82 Query: 62 EVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKA--QKLHK 116 E+ E+ + + K + + + FN+ S A + Sbjct: 83 EIRRALEQNVDPQHIVFAGVGKADWEIELAIDNNIFAFNSESLEEIEVISQIASLKNKQV 142 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCE 168 I LR+NP++ + + G D ++ N+ GL +H + Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFIDVLKWLKNDFQNFDNINIIGLHYHVGSQ 202 Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 ++ F K IE I+ GGG+ ++ R + Sbjct: 203 ILNYQVFQSLAITTNEHIKLLKQNDINIEHINFGGGLGIDYQNPHQNPIVDFDNYFARFR 262 Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277 EF E +++ E G ++V + L + VL + I+D+ + + L + Sbjct: 263 EFFEYCDDVKLHFELGRSLVGQSGVLVSQVLFNKVTQDTHFAIIDAGMTELIRPALYQAQ 322 Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G C + D+F +++ +K GD ++ Y + Sbjct: 323 HKIEALIDESVDEKQHYHIVGPICESSDVFAKYYQLPKIKRGDLLAIYSAGAYGKVLASE 382 Query: 334 FNGINMPTIAVK 345 +N Sbjct: 383 YNLRPTVQEYFI 394 >gi|222106726|ref|YP_002547517.1| diaminopimelate decarboxylase [Agrobacterium vitis S4] gi|221737905|gb|ACM38801.1| diaminopimelate decarboxylase [Agrobacterium vitis S4] Length = 416 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 53/403 (13%), Positives = 118/403 (29%), Gaps = 49/403 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + A K + + + + + +L E Sbjct: 17 GTPVWVYDADTIRARIAQLSSFDV-----IRFAQKACSNTHILRQMREAGVVVDAVTLGE 71 Query: 63 VMLGH--------EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 + E + +D V+++ + ++ L++ A+ Sbjct: 72 IERARRAGYVTGQASGVAEIVFTADVFDRSTLDRVVADKIEVNAGSIDMLHQLG--ARSP 129 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCE 168 ++ LRINP + + S+ G + + + GL H Sbjct: 130 GHRVWLRINPGFGHGHSNKTNTGGENSKHGIWFEQLQEALAAVRRYSLTLVGLHMHIGSG 189 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE- 223 + + + IE IS GGG+ ++ + + Sbjct: 190 VD-YRHLQRVCGAMVTFCCELGADIEAISAGGGLSIPYKDGEEEIDTVHYFALWDSARKQ 248 Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQE 277 ++ +++ +EPG + ++ L V + ++VD+ + Sbjct: 249 IEEYLRHKIRLEIEPGRFLTADSGVLLAEVRATKTMGSNHFILVDAGFSDLARPAMYGSY 308 Query: 278 SATIY---------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFE 321 + P +V G C +GD+F E + GD + F Sbjct: 309 HGISVLPAPNNSAPHSDVPVPTVVAGPLCESGDVFTQGEFGTIEKRDLPQAQPGDYMVFH 368 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 D Y + + +N + D R + +D Sbjct: 369 DTGAYGASMSSNYNSRLYAPEVLIEGDNHRLIRRRQTLDDLLA 411 >gi|121611670|ref|YP_999477.1| diaminopimelate decarboxylase [Verminephrobacter eiseniae EF01-2] gi|121556310|gb|ABM60459.1| diaminopimelate decarboxylase [Verminephrobacter eiseniae EF01-2] Length = 414 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 52/398 (13%), Positives = 111/398 (27%), Gaps = 44/398 (11%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++ D ++ + + A K + + + + S E+ Sbjct: 19 TPLWVYDAATIVERIARLSRFD-----TIRFAQKACSNIHILALMRAQGVLVDAVSRGEI 73 Query: 64 MLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117 + + D A + + ++ L++ ++ Sbjct: 74 LRALAAGYQTGAQPAQIVFTADLFDAATLACVIEHRVPVNAGSMDMLHQLGPRS--PGHA 131 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN-- 169 + LRINP + + S+ G D I ++ GL H Sbjct: 132 VWLRINPGFGHGHSHKTNTGGEHSKHGIWHTDLPAALAAIRQHGLDLVGLHMHIGSGVDY 191 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------ 223 + + + + + IS GGG+ + E Sbjct: 192 RHLAQVCDAMVALVRGVRAAGHDLRAISAGGGLSVPYRSGDPVVDTAHYHGLWEAARQQA 251 Query: 224 ----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES 278 + + + +EPG +V + L V + N ++ D+ + + Sbjct: 252 QAIIGHPLTLEIEPGRYLVAESGVLLAAVCATKQVGSNHFVLLDAGFNELLRPSMYGSYH 311 Query: 279 ATIYPN-----TGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAGY 326 A +V G C AGD+F + P ++GD + D Y Sbjct: 312 AMSLLRRDGASAAGRPTVVAGPLCEAGDVFTQSGDGLVLPRDLPPAEVGDLLLIHDTGAY 371 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + A+ R + ++ Sbjct: 372 GATMSSNYNTRPLSAEALVEGAQARLIRRRQTVDELLA 409 >gi|304438258|ref|ZP_07398199.1| diaminopimelate decarboxylase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368624|gb|EFM22308.1| diaminopimelate decarboxylase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 431 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 60/393 (15%), Positives = 116/393 (29%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+ K+ N + A+K + L++ GT SS Sbjct: 33 PTPFHLYDEAKIRANFRRLRETFAWAPSFREHFAVKALPNPRIVQILHEDGAGTDCSSTP 92 Query: 62 EVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+++ GE D + + + L+ A+ L Sbjct: 93 ELIISAAAGVKGEEIMLTSN--DTPYEEFQKAIELGAVINLDDLSHLDYMAKHAGLPNLL 150 Query: 121 RINPSVSYSKFILADPNRP-FSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL 173 + +P ++ G + E + + G+ Sbjct: 151 CFRYNPGNLVEGNDIIGKPVEAKYGLTREQMFEGYRRALEMGVKRFGVHTMVISAELRTE 210 Query: 174 CF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 F M + + +E+++LGGG + + E+ +I Sbjct: 211 AFLLTARLMFELAAELKEKLGIHVEFVNLGGGFGIPYRPEQDGIDYDAVGAGIERLYNEI 270 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E I + L +TVL + K + +DS + + + Sbjct: 271 MRPAGLGDVGIRTESARGITGDAGWLVSTVLHEKDTYKKYIGLDSCMANLMRPAIYGAYH 330 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + IGD + D + + Sbjct: 331 HITVLGKENAPADHVYDVTGSLCENNDKFAIDRALPKIDIGDILIIHDTGAHGSAMGFNY 390 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 N ++ +DG+I+ IR + +DY+ L Sbjct: 391 NAKLHCAELLRRMDGSIELIRRPQTIDDYFATL 423 >gi|126699670|ref|YP_001088567.1| diaminopimelate decarboxylase [Clostridium difficile 630] gi|255307059|ref|ZP_05351230.1| diaminopimelate decarboxylase [Clostridium difficile ATCC 43255] gi|115251107|emb|CAJ68938.1| Diaminopimelate decarboxylase [Clostridium difficile] Length = 430 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 67/399 (16%), Positives = 123/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D+ + N + K K+ A K F M + +N+ S Sbjct: 29 QTPLYVFDEALVRQNCREYIEYFKAREGKNKVAYAGKAFLPLYMCNLINEEQMCLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F E ++ K + + + + +L+ + + Sbjct: 89 GELYTAYKSNFPMEKVFFHGNNKTKKEINMGLDLGVGKFVVDNFYELDLLEALCEDKGKT 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 ++I RI P + + S+ G + E + + GL H Sbjct: 149 QEIYFRITPGIEAHTHDYIKTGQIDSKFGFALVNGDLFRAIEKLSEYKNIKLVGLHAHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + M+ +++ F Q+ I LGGG+ + + E Sbjct: 209 SQIFDVEPYIDTVDIMMNLVKEIKEKFNIQLTEIDLGGGVGVYYSEGDKPKTIKEFCETI 268 Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + +EPG +IV N + TV I + V V + +V Sbjct: 269 ITKAETSCKELGIEVPTLVIEPGRSIVANAGSTLYTVGSIKDIKDVRVYVSVDGGMTDNV 328 Query: 270 PDYLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L N + AM + G+ C +GDI +K GD + Sbjct: 329 RPSLYQASYECSIVNKINHEAMNHVTIAGKCCESGDILIGDINIMDIKSGDILITTSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I + + SY D Sbjct: 389 YGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQSYEDLLA 427 >gi|325696353|gb|EGD38244.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK160] Length = 416 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 54/392 (13%), Positives = 117/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F + ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFAEQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169 V + D ++ G I++ + G+ + + Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELAHQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + D ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDDNVRMIRRAEKPEDYFATL 409 >gi|126696535|ref|YP_001091421.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9301] gi|126543578|gb|ABO17820.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9301] Length = 457 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 55/397 (13%), Positives = 114/397 (28%), Gaps = 35/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L N+ + + A K ++ M ++ G + S Sbjct: 49 DSPLYILDEITLRNSCKAYKKALEKYYPGKSLPIYASKANSSIFMSSLVSSEGLGLDAVS 108 Query: 60 LYEVMLG-HEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115 E++ E ++ D E++ + N +I + L + + A Sbjct: 109 EGELLTAIKGGVPNEKIVFHGNNKSDKELEFAVRNNIKVIVDNDYDLERLDEISNAFNHD 168 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE 168 +I +R P + S+ G + ++ + GL H + Sbjct: 169 LEIMIRFTPGIECHTHEYIRTGSFDSKFGFGIEYLNILFNRISNTKHLKLKGLHAHIGSQ 228 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + + + K F +E +++GGG+ + + Sbjct: 229 IFELDPHKDLGEIMVKVILEAKKFGHNVEELNVGGGLGIRYTESDDPPSIDEWVKTISSS 288 Query: 226 -----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 + EPG +IV+ + E VD + + Sbjct: 289 VVEACKKNNLDFPTLMCEPGRSIVSTAGITIYKIGAFKEIPGIRTYLSVDGGMSDNPRPI 348 Query: 273 LLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + G+ C +GD+ + K GD I YN Sbjct: 349 TYQSNYSACLVSNPFNINSKNKYTIAGKHCESGDVLFKEIELAECKTGDLICVFGTGAYN 408 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + + S D Sbjct: 409 NSMSSNYNRIPRPATLLVKDGEAEIIQKRESPLDLLK 445 >gi|221633687|ref|YP_002522913.1| diaminopimelate decarboxylase [Thermomicrobium roseum DSM 5159] gi|221156044|gb|ACM05171.1| diaminopimelate decarboxylase [Thermomicrobium roseum DSM 5159] Length = 449 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 53/401 (13%), Positives = 111/401 (27%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP YL D + + + ++ + L+ A K FAA G+ L G S Sbjct: 39 GTPLYLYDVATIRAAIAAYRHGLESYPGETALVYAAKAFAAVGLLRLLASEGLGVDCVSE 98 Query: 61 YEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ L E + ++ A+ I+ + +L + A+ K Sbjct: 99 GELALARAAGVPAERLVLHGNNKSEEELRFALELGVGRIVVDNHDELERLVAIARSTGKT 158 Query: 118 IGLRINPSVS---YSKFILADPNRPFSRLGEKCK--DKIESEIKNVN-------GLMFHN 165 + + + + + + S+ G D + + ++ G H Sbjct: 159 VPILLRLNPGVEPHDTHAYRRTGQLDSKFGLPIVTGDAEAAVARCLSTPELALLGFHVHI 218 Query: 166 NCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPV---------- 211 + + + ++ + G F + S GGG Sbjct: 219 GSQLFDLIPYQRAIEQVFAFAGELSRRFAFSLREFSPGGGFGIPYTTEDPVLDLAEATAQ 278 Query: 212 -KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 + + ++ LEPG ++V V + V + + Sbjct: 279 VSRWVAEAASMAGLPLPRLVLEPGRSLVGRAGMALYRVGSVKRLPGIRTYVAVDGGMADN 338 Query: 269 VPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + + G+ C +GD+ GD ++ Sbjct: 339 IRPALYGARYLALPVIERADRRRERVTLVGKYCESGDVLVRDAVLPEPVPGDLVAIPVAG 398 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + R + D Sbjct: 399 AYCLAMASNYNLARRPVVVALEAGRVELWQRRETIADLLAR 439 >gi|160878460|ref|YP_001557428.1| Orn/DAP/Arg decarboxylase 2 [Clostridium phytofermentans ISDg] gi|160427126|gb|ABX40689.1| Orn/DAP/Arg decarboxylase 2 [Clostridium phytofermentans ISDg] Length = 419 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 111/390 (28%), Gaps = 30/390 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+Y+ D++ + N N G K A+K + L + G+ SS E Sbjct: 20 TPFYIYDEKGIRENARKLKEAFSWNKGFKEYFAVKATPNPFILQILKEEGCGSDCSSETE 79 Query: 63 VML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +M+ G E + + E I + + ++ K++ Sbjct: 80 LMISEAVGITGSEIMFSSNNTPEGEFTKAKELGAIINLDDYTHIDFLKEECGIPETICCR 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN----------K 170 V + D ++ G + I+ K + + + Sbjct: 140 YNPGGVYEVSNGIMDNPG-DAKYGFTKQQLIDGYKKLMELGAKNFGIHSFLVSNTVTNDY 198 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI- 229 + + + I +I+L GGI + + E K +I Sbjct: 199 YPALARTLFELAVELKNETNANITFINLSGGIGIPYLPEEKGNDIMVIGEGVRKAYEEIL 258 Query: 230 ----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 + E G ++ L T + K + VD+ + + Sbjct: 259 VPNGLGDVAIFTELGRYMLAPYAHLVTKAIHEKHIYKEYLGVDACAVNLMRPAMYGAYHH 318 Query: 280 TIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 V G C D F V +GD + D + +N Sbjct: 319 ITVLGKEETPLDTMYDVVGSLCENNDKFAIDRMLPKVDMGDYLVIHDTGAHGFAMGYNYN 378 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 G + D +++ IR + DY+ Sbjct: 379 GKLKSAELLLKEDDSVQLIRRAETPEDYFA 408 >gi|254975641|ref|ZP_05272113.1| diaminopimelate decarboxylase [Clostridium difficile QCD-66c26] gi|255093028|ref|ZP_05322506.1| diaminopimelate decarboxylase [Clostridium difficile CIP 107932] gi|255101185|ref|ZP_05330162.1| diaminopimelate decarboxylase [Clostridium difficile QCD-63q42] gi|255314770|ref|ZP_05356353.1| diaminopimelate decarboxylase [Clostridium difficile QCD-76w55] gi|255517445|ref|ZP_05385121.1| diaminopimelate decarboxylase [Clostridium difficile QCD-97b34] gi|255650555|ref|ZP_05397457.1| diaminopimelate decarboxylase [Clostridium difficile QCD-37x79] gi|260683653|ref|YP_003214938.1| diaminopimelate decarboxylase [Clostridium difficile CD196] gi|260687313|ref|YP_003218447.1| diaminopimelate decarboxylase [Clostridium difficile R20291] gi|306520503|ref|ZP_07406850.1| diaminopimelate decarboxylase [Clostridium difficile QCD-32g58] gi|260209816|emb|CBA63673.1| diaminopimelate decarboxylase [Clostridium difficile CD196] gi|260213330|emb|CBE04911.1| diaminopimelate decarboxylase [Clostridium difficile R20291] Length = 430 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 68/399 (17%), Positives = 123/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D+ + N + K K+ A K F M + +N+ S Sbjct: 29 QTPLYVFDEALVRQNCREYIEYFKAREGKNKVAYAGKAFLPLYMCNLINEEQMCLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F E ++ K E + + + +L+ + + Sbjct: 89 GELYTAYKSNFPMEKVFFHGNNKTKEEINMGLDLGVGKFVVDNFYELDLLEALCEDKGKT 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 ++I RI P + + S+ G + E + + GL H Sbjct: 149 QEIYFRITPGIEAHTHDYIKTGQIDSKFGFALVNGDLFRAIEKLSEYKNIKLVGLHAHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + M+ +++ F Q+ I LGGG+ + + E Sbjct: 209 SQIFDVEPYIDTVDIMMNLVKEIKEKFNIQLTEIDLGGGVGVYYSEGDKPKTIKEFCETI 268 Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + +EPG +IV N + TV I + V V + +V Sbjct: 269 ITKAETSCKELGIEVPTLVIEPGRSIVANAGSTLYTVGSIKDIKDVRVYVSVDGGMTDNV 328 Query: 270 PDYLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L N + AM + G+ C +GDI +K GD + Sbjct: 329 RPSLYQASYECSIVNKINHEAMNHVTIAGKCCESGDILIGDINIMDIKSGDILITTSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I + + SY D Sbjct: 389 YGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQSYEDLLA 427 >gi|262201840|ref|YP_003273048.1| diaminopimelate decarboxylase [Gordonia bronchialis DSM 43247] gi|262085187|gb|ACY21155.1| diaminopimelate decarboxylase [Gordonia bronchialis DSM 43247] Length = 473 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 58/406 (14%), Positives = 126/406 (31%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +L+D+ + + G ++ A K F + +N+ S E Sbjct: 64 GTPVFLVDEADFRSRCADMMSAFGPYG-RVHYASKAFLCTEVARWVNEEGLSLDVCSGGE 122 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F E A + K A+ + ++ ++ ++ + A + + Sbjct: 123 LAIALRAGFPPERIALHGNNKSVAELTAALDAGVGHVVLDSFVEIERLDALAGERGVVAD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + + ++ + GL H + Sbjct: 183 VLVRVTVGVEAHTHEFISTAHEDQKFGFALAGGVAMDAVRRVFATDNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + F + + LGGG+ + + E Sbjct: 243 IFDMDGFELAAHRVLGLLHDVVAEFGVDKTAQMSIVDLGGGLGISYLPEERPLPVGTVAE 302 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 + I +EPG AI T V I + +++ V VD Sbjct: 303 KLAEIVRRESSAVGLPMPTIAVEPGRAIAGPGTVTLYRVGTIKDVALGGGSVRRYVSVDG 362 Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L E + + V G+ C +GDI + + ++ GD I Sbjct: 363 GMSDNIRTVLYQAEYDVRLVSRVSTARAVVSRVVGKHCESGDIVIKDCWLPEDLEPGDLI 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N P + +R + +D+++ Sbjct: 423 AVAATGAYCYSMSSRYNMAMRPPVVAIADGADRMLLRRENIDDFFS 468 >gi|227547995|ref|ZP_03978044.1| diaminopimelate decarboxylase [Corynebacterium lipophiloflavum DSM 44291] gi|227079901|gb|EEI17864.1| diaminopimelate decarboxylase [Corynebacterium lipophiloflavum DSM 44291] Length = 448 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 51/403 (12%), Positives = 118/403 (29%), Gaps = 41/403 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D+ + + A K F + +++ +S E Sbjct: 38 GTPVMVVDEDDFRSRCRDMAAAFGAPE-NVHYASKAFLTRMIARWVDEEGLALDVASENE 96 Query: 63 VMLGHEK-FGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + K + + ++ ++ +L + D +L +++ Sbjct: 97 LRIALAANFPPERITVHGNNKSESFLTLCAEAGVGHVVIDSHQELAELNDVCGRLGTNQE 156 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + +R+ P V + + G D I + ++GL H + Sbjct: 157 VFVRVKPGVDAHTHEFVATSHEDQKFGLSLASGSAHKAAVDAIAAANLTLSGLHCHVGSQ 216 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKD-----------YPVKD 213 F + + ++++ LGGG D + Sbjct: 217 VFDAEGFKLAAERVLGLYATIYRENGVALDYLDLGGGYGIAYVDSEQALDVTGVARDLLS 276 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267 ++ + + +EPG AI +T I E + + Sbjct: 277 SVDQVAAELGIPAPTVVVEPGRAIAGPSTVTVYRAGTIKEVHTSHTTTRRYIAVDGGMSD 336 Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDI-FGEFHFEKPVKIGDRISFED 322 ++ L + + + G C +GDI G+ + + + GD I+ Sbjct: 337 NIRPALYDSAYDGRVVNRFVDAPETETRLVGSHCESGDILIGDALWPEDIATGDLIALAA 396 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + +N P + ++ + +D Sbjct: 397 TGAYCYAMSSNYNAFGRPAVVAVRAGNIAPMLKRETVDDLLAR 439 >gi|293364735|ref|ZP_06611452.1| diaminopimelate decarboxylase [Streptococcus oralis ATCC 35037] gi|291316185|gb|EFE56621.1| diaminopimelate decarboxylase [Streptococcus oralis ATCC 35037] Length = 420 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 21 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILKEEGCGVDCSSYV 80 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G ++ D E TI + + + A Sbjct: 81 ELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 141 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 200 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAVIGEGVRKVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 260 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 319 Query: 279 A--TIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 320 HITNLTHPDGPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 379 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 380 AKLRSAEILYTEEGKTRQIRRAERPEDYFATL 411 >gi|325002813|ref|ZP_08123925.1| diaminopimelate decarboxylase [Pseudonocardia sp. P1] Length = 484 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 59/419 (14%), Positives = 123/419 (29%), Gaps = 59/419 (14%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + + + A K F + + Q S E Sbjct: 65 GTPLFVLDEADFRSRCAEFAAAFGASA--VHYAAKAFLCTEVARWVAQEGLSLDVCSGGE 122 Query: 63 VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F A + K AV + ++ ++ ++ + + A + + Sbjct: 123 LAVALRAGFPPPRIALHGNNKSVPELAAAVDAGVGGVVVDSFDEIARLEAVAAERGVTAP 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG----------------EKCKDKIESEIKNVNGL 161 + +R+ V + G E + + + + GL Sbjct: 183 VLIRLTVGVEAHTHEYIATAHEDQKFGFSIAAGSAGEKDSAAIEAARRVVAARHLELVGL 242 Query: 162 MFHNNCENKSFLCFSAMLKNIEKEFG--------HFITQIEWISLGGGIHFTDKD----Y 209 H + F A + + K + + + LGGGI + Sbjct: 243 HSHIGSQIFDTEGFEAAARRVVKVLADLHAEHGTENLAALRTLDLGGGIGIAYRPGEVPL 302 Query: 210 PVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE-----NIKN 257 + + L+ ++ I +EPG AI T V I + + Sbjct: 303 SMPALAEELRAIVKRECAASGLDVPAIAVEPGRAIAGPGTVTVYEVGTIKDVPLGGYSRR 362 Query: 258 LVIVDSSVEAHVPDYLLYQESAT-----------IYPNTGPYTAMVCGRSCLAGDIFGEF 306 V VD + ++ L E + P + V G+ C +GDI Sbjct: 363 YVSVDGGMSDNIRTSLYDAEYDVRLVSRSSERDSVPGGDEPVLSRVVGKHCESGDIVVRD 422 Query: 307 HFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + GD ++ Y + +N + P + +R + D + Sbjct: 423 CWLPADLAPGDLLAVAATGAYCYAMASGYNRLPRPAVVAVREGADRTLLRRETLEDQFR 481 >gi|258652304|ref|YP_003201460.1| diaminopimelate decarboxylase [Nakamurella multipartita DSM 44233] gi|258555529|gb|ACV78471.1| diaminopimelate decarboxylase [Nakamurella multipartita DSM 44233] Length = 484 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 64/419 (15%), Positives = 120/419 (28%), Gaps = 60/419 (14%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +ID+ + A + A K F + L + E Sbjct: 61 GTPLMVIDEADFRSRCQDFADAFGGA-ASVHYAGKAFLCSEIVRWLADEGLSLDVCTSGE 119 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL---HK 116 + L F E A + + K A+ I+ ++ ++ + + Sbjct: 120 LRLALRAGFPPERIALHGSNKSDAELAMAVQHRIGAIVVDSFHEIARLAGLVEDRASDPV 179 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNC 167 + +R+ V + G E + + + GL H Sbjct: 180 PVMIRVTVGVEAHTHEFIATAHEDQKFGFSLTGGDAAEAARRVLALSGLRLIGLHSHIGS 239 Query: 168 ENKSFLCFSAMLKN-------IEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFC 215 + F I +EF I + LGGG+ Sbjct: 240 QIFDPSGFEVAAHRVVGLLRTIVEEFPAAADTITTLDLGGGLGIAYTSDDDPPAPDVMAK 299 Query: 216 QRLKEFSEKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDS 263 ++ + + + +EPG AI T V I + + V VD Sbjct: 300 SLIEIVTRECQLAGLTVPAVMVEPGRAIAGPGTVTLYEVGTIKDVTLDGGLTRRYVSVDG 359 Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318 + ++ L E A+ + P + V G+ C +GDI + + IGD + Sbjct: 360 GMSDNIRTALYDAEYTVTLASRSSDATPVLSRVVGKHCESGDIVVRECYLPADLAIGDLL 419 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGT---------------IKAIREFSYNDY 362 + Y + +N + P + + GT +R + +D Sbjct: 420 AVAATGAYCYAMSSNYNRVPRPAVVAVSGQGTGGSAGTDGAAGGATDRVVLRRETDDDL 478 >gi|315103517|gb|EFT75493.1| diaminopimelate decarboxylase [Propionibacterium acnes HL050PA2] Length = 476 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 128/399 (32%), Gaps = 43/399 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D+ L + A K F + ++Q + + E Sbjct: 63 GSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTIASWIDQEGLFLDTCTGGE 120 Query: 63 VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 ++ + + K D A+ II +++ ++ + + ++ H + Sbjct: 121 LITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G S+ ++ G+ H + Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ 240 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +K +E+ + + + LGGG + L + Sbjct: 241 IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE 300 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267 I LEPG AIV TT TV + + V VD + Sbjct: 301 IVTVEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD 360 Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 ++ L E + + N P + G+ C AGDI + V GD I+ Sbjct: 361 NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSYN 360 Y+ + + +N + P + N D G + +R + + Sbjct: 421 AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENID 459 >gi|314923475|gb|EFS87306.1| diaminopimelate decarboxylase [Propionibacterium acnes HL001PA1] gi|314966518|gb|EFT10617.1| diaminopimelate decarboxylase [Propionibacterium acnes HL082PA2] gi|315092962|gb|EFT64938.1| diaminopimelate decarboxylase [Propionibacterium acnes HL060PA1] gi|327327343|gb|EGE69119.1| diaminopimelate decarboxylase [Propionibacterium acnes HL103PA1] Length = 476 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 128/399 (32%), Gaps = 43/399 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D+ L + A K F + ++Q + + E Sbjct: 63 GSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTIASWIDQEGLFLDTCTGGE 120 Query: 63 VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 ++ + + K D A+ II +++ ++ + + ++ H + Sbjct: 121 LITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G S+ ++ G+ H + Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ 240 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +K +E+ + + + LGGG + L + Sbjct: 241 IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE 300 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267 I LEPG AIV TT TV + + V VD + Sbjct: 301 IVTVEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD 360 Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 ++ L E + + N P + G+ C AGDI + V GD I+ Sbjct: 361 NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSYN 360 Y+ + + +N + P + N D G + +R + + Sbjct: 421 AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENID 459 >gi|315650185|ref|ZP_07903260.1| diaminopimelate decarboxylase [Eubacterium saburreum DSM 3986] gi|315487542|gb|EFU77850.1| diaminopimelate decarboxylase [Eubacterium saburreum DSM 3986] Length = 423 Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 66/391 (16%), Positives = 121/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N N G K A+K + + L +Y G SS+ Sbjct: 20 PTPWHIYDEKGIRENAKRLNEAFGWNKGFKEYFAVKATPNPFIMNILKEYGCGVDCSSMV 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ + F G+ ++ E I + ++ + ++ KL K + Sbjct: 80 ELEMSDACGFSGKDIMFSSNETPIEEFKFANDLGAIINLDDITHIKYVEEVCGKLPKTMC 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCEN 169 R NP ++ N ++ G IE+ K V H Sbjct: 140 ARYNPGGVFTMSNGIMDNPGDAKYGMTPDQLIEAFKIMQSKGVKHFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224 + + + +E+I+L GGI + + +K Sbjct: 200 YYPKLARELFEFAVRIKNETGINVEFINLSGGIGIPYTPDSEPNDIFEISNGVKKAYEEV 259 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 V I+ E G ++ L T + K+ + VD+ + + Sbjct: 260 LEANAIMDVAIFTELGRYMLAPYGALITEAIHEKNIYKHYIGVDACASNLMRPAMYGAYH 319 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F ++ GD I D + + Sbjct: 320 HLTVLGKENEKASEVYDVVGSLCENNDKFAIDRKLPKIEKGDYIYIHDTGAHGFAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG++K IR + DY+ Sbjct: 380 NGKLRSAELLLQEDGSVKMIRRAETDKDYFA 410 >gi|330792841|ref|XP_003284495.1| hypothetical protein DICPUDRAFT_45522 [Dictyostelium purpureum] gi|325085525|gb|EGC38930.1| hypothetical protein DICPUDRAFT_45522 [Dictyostelium purpureum] Length = 423 Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 62/396 (15%), Positives = 113/396 (28%), Gaps = 30/396 (7%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQY-MDGTTS 57 + TP++ + K++ N + + + K A+K + L + G Sbjct: 26 LYPTPFHFYNGDKIVENGKSLMTNFQQYFPNYKNYFAVKATPNPSILKILKEQTGMGVDC 85 Query: 58 SSLYEVMLG-HEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 SSL E++L F GE + K+ E I + ++Q+ + Sbjct: 86 SSLAELLLSEKVGFKGEEIMFTSNNTKENEYKKAYELGAIINLDDITQIEYLYSSLGNVM 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN 169 ++ N ++ G D + K GL Sbjct: 146 PELLSFRYNPGPLKSGNDIIGNPKDAKFGLTGDDLQNAYNKAKELGVKRFGLHCMVASNE 205 Query: 170 KSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F + + Q E ++LGGGI + + V Q+L E K Sbjct: 206 LDIDYFEETARLLFSTVATLSKQCGIQFEMVNLGGGIGIPYRPHQVAVNYQKLTERIYKA 265 Query: 226 SVQIYL-----------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274 ++ L E G I L T + K + VD+ + + + Sbjct: 266 YKELILDAGLPQMNVVTECGRVITGPYGALITRAIHSKSTYKEYIGVDACMADLMRPGMY 325 Query: 275 YQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + + G C D F + D I D + + Sbjct: 326 NAYHHVTVIDPKDPSKLKQYDLVGSLCENNDKFCVDRTLPEINRNDLIVIHDSGAHGHSM 385 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 +NG + + R +Y D + L Sbjct: 386 GFNYNGKLRSAEYLLLNNEIKLIRRAETYEDLFATL 421 >gi|329122097|ref|ZP_08250705.1| diaminopimelate decarboxylase [Dialister micraerophilus DSM 19965] gi|327466904|gb|EGF12420.1| diaminopimelate decarboxylase [Dialister micraerophilus DSM 19965] Length = 415 Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 121/391 (30%), Gaps = 28/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ D++ + +N++ + A+K + L+ G SS+ Sbjct: 21 GTPFYIYDQKGIEDNINNFKKSFSWCSNFYKYFAVKATPNPWILKLLHNMGIGADCSSMA 80 Query: 62 EVMLGHE-KFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L G+ ++ D E S I + +S + + + +KI Sbjct: 81 ELILAEAVGLKGKEIVFSSNNTADEEFIKANSLGAIINLDDISMFGDLERL-KIIPEKIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS-------- 171 R NP S ++ G + +ES + Sbjct: 140 FRYNPGNKVSIGNNFIGKPEDAKYGMTKEQLLESVQIAKKLKIPFIGIHTMIVSSELTLD 199 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + F +++I GGGI L + + + + Sbjct: 200 VLIANIRMLFELAIEIREKFNVIVDFIDFGGGIGIPYHPDDRAVNLFELGKRTHELFKSM 259 Query: 230 Y---------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 E G AI L T V+ K + VD+ + + + Sbjct: 260 MSGFEKTQLSFECGRAITGPYGYLVTKVIHHKNIYKKYIGVDACMADLMRPGIYGAYHEI 319 Query: 281 IYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + G C D F + GD I D + + +NG Sbjct: 320 TVCSKEDTNETQIYDIVGSLCENNDKFAINRKLPKILKGDLIVIHDTGAHGHSMGFNYNG 379 Query: 337 INMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DGTI+ IR + ND ++ L Sbjct: 380 KLRHQELLLHSDGTIQKIRRNETLNDLFSTL 410 >gi|302385100|ref|YP_003820922.1| Orn/DAP/Arg decarboxylase 2 [Clostridium saccharolyticum WM1] gi|302195728|gb|ADL03299.1| Orn/DAP/Arg decarboxylase 2 [Clostridium saccharolyticum WM1] Length = 423 Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 65/391 (16%), Positives = 120/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G + A+K + + L Y G SS+ Sbjct: 20 PTPFHLYDEKGIRENARKLKDAFSWNKGYREYFAVKATPNPFILNILKDYGCGADCSSMT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G ++ E I + ++ + K + + I Sbjct: 80 ELMMSDSLGFSGSDIMFSSNNTPAEEFQYADKIGGIINLDDITHIEYLKKAIGHIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 R NP + N S+ G + E+ + ++ L + Sbjct: 140 CRYNPGGIFKISNDIMDNPGDSKYGMTTEQMFEAFRILKSNGAKHFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 L + + K I +I+L GGI + + + + E + +I Sbjct: 200 YYPLLAKVLFELAVKLKKETGAHISFINLSGGIGIPYRPGQEPNDIKAIGEGVREVYEEI 259 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 Y E G ++ L T + K V VD+ + + Sbjct: 260 LVPEGMGDVAIYTELGRFMLGPYGGLVTRAIHEKHTHKEYVGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + GD + D + + Sbjct: 320 HITVMGKEGEVCSHKYDVVGSLCENNDKFAIDRMLPEISRGDLLFIHDTGAHGYAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR + DY+ Sbjct: 380 NGKLKSAELLLKEDGSVQMIRRAETPRDYFA 410 >gi|156932679|ref|YP_001436595.1| diaminopimelate decarboxylase [Cronobacter sakazakii ATCC BAA-894] gi|156530933|gb|ABU75759.1| hypothetical protein ESA_00463 [Cronobacter sakazakii ATCC BAA-894] Length = 420 Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 52/398 (13%), Positives = 111/398 (27%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + +D + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRAQIDRLRQFDV-----IRFAQKACSNIHILRLMREAGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKI 118 + + D A + + ++ A ++ Sbjct: 82 RAIAAGYDPRQNPDDIVFTADVLDDATIARVHELG--VPVNAGSVDMLAQLGAVSPGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G D + + G+ H Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYSDLPTALAVMQRYQLKLVGMHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + F +E IS GGG+ ++ + Sbjct: 200 HLERVCGAMVSQVI-EFGQDLEAISAGGGLSIPYREGDETIDTDHYFGLWNRAREQIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + +++ +EPG +V L V + ++ V++D+ + + Sbjct: 259 FGHPIKLEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPSMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E V+ GD + D Y Sbjct: 319 ALAADGRDLRDAPLMETVVAGPLCESGDVFTQQEGGKVETRALPAVRPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + ++ Sbjct: 379 GASMSSNYNSRPLLPEVLLENGEARTIRRRQTIDELLA 416 >gi|331265652|ref|YP_004325282.1| diaminopimelate decarboxylase [Streptococcus oralis Uo5] gi|326682324|emb|CBY99941.1| diaminopimelate decarboxylase [Streptococcus oralis Uo5] Length = 418 Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNRAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G ++ D E TI + + + A Sbjct: 79 ELLMSHKLDFPGSEIMFSSNNTPDKEYAYAHELGATINLDAFEDIEHLERAAGIPKIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAVLKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAVIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HITNLTHPDGPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKTRQIRRAERPEDYFATL 409 >gi|78779484|ref|YP_397596.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9312] gi|78712983|gb|ABB50160.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9312] Length = 457 Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 55/397 (13%), Positives = 119/397 (29%), Gaps = 35/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L N+ + + A K ++ M + ++ G + S Sbjct: 49 DSPLYILDEITLRNSCRAYKNALEKYYPGKSLPIYASKANSSIFMSNLVSSEGLGLDAVS 108 Query: 60 LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + E ++ D EI+ + N +I + L + + + ++ Sbjct: 109 EGELLTALKGGVPNEKIVFHGNNKSDKEIEFAVRNNIQVIVDNDYDLERLEGISNSFNRD 168 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCE 168 + + I P + S+ G ++ + GL H + Sbjct: 169 LEIMIRFTPGIECHTHEYIRTGSFDSKFGFGIEYLNILFDRINNTKHLKLKGLHAHIGSQ 228 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF---- 221 + + + F I+ ++LGGG+ + + Sbjct: 229 IFELDPHKDLGEIMVNVILDAKKFGHNIQKLNLGGGLGIKYTENDDPPSIDEWVKTISTS 288 Query: 222 ----SEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 +K++ + EPG +IV+ + E VD + + Sbjct: 289 VVKACKKHNLDLPTLMCEPGRSIVSTAGITIYKIGAFKEIPGIRTYLSVDGGMSDNPRPI 348 Query: 273 LLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + G+ C +GD+ + K GD I YN Sbjct: 349 TYQSNYSACLVSNPFNINSKNKYTIAGKHCESGDVLFKEIELADCKTGDLICVFGTGAYN 408 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N I P + + S D Sbjct: 409 NSMSSNYNRIPRPAALLVCNGEAEIIQKRESPFDLLK 445 >gi|255010466|ref|ZP_05282592.1| diaminopimelate decarboxylase [Bacteroides fragilis 3_1_12] gi|313148271|ref|ZP_07810464.1| diaminopimelate decarboxylase [Bacteroides fragilis 3_1_12] gi|313137038|gb|EFR54398.1| diaminopimelate decarboxylase [Bacteroides fragilis 3_1_12] Length = 387 Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 64/367 (17%), Positives = 121/367 (32%), Gaps = 27/367 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + + + A+K A + + + G S Sbjct: 13 LQTPFYYYDTKVLRDTLACVNREVARYDNFSVHYAVKANANSKVLTIIRESGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + K + + D FN +V +L + A + Sbjct: 73 GEIRAAIKAGFPAGKIVFAGVGKADWEINLGLDYDIFCFNVESVPELEVINELAAAKGKV 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP+V ++ G D + + GL FH + Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMHDMDKVIDVALGMKNVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFS 222 F+ + ++ + +E I++GGG+ + DF + + Sbjct: 193 ILDMGDFIALCNRVNELQDKLEARHILVEHINVGGGLGIDYDHPNRQAIPDFADYFRTYD 252 Query: 223 EKY----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 E ++ E G AI +L + VL + + + D+ + + L Sbjct: 253 EHLKLRPHQTLHFELGRAITGQCGSLISKVLYVKQGTNKQFAILDAGMTDLIRPALYQAH 312 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + T V G C + D+FG+ VK GD I+ Y + + Sbjct: 313 HKMENLTSEDTTVETYDVVGPICESSDVFGKAVDLNKVKRGDLIALRSAGAYGEIMASGY 372 Query: 335 NGINMPT 341 N +P Sbjct: 373 NCRELPK 379 >gi|145222885|ref|YP_001133563.1| diaminopimelate decarboxylase [Mycobacterium gilvum PYR-GCK] gi|145215371|gb|ABP44775.1| diaminopimelate decarboxylase [Mycobacterium gilvum PYR-GCK] Length = 472 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 55/406 (13%), Positives = 118/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + G + A K F + +++ ++ E Sbjct: 64 GTPVFVIDEADFRSRCRDISSAFGG-GEYVHYAAKAFLCGEIARWVDEEGLSLDVATGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F E + K AV ++ +++ ++ + A + + Sbjct: 123 LAVALHAGFPAERITVHGNNKSVAELTAAVKHGVGHVVVDSMIEIERLDRIAADNGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + E+ + GL H + Sbjct: 183 VLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMEAVRRVFEAGNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + F + ++ + LGGG+ + L Sbjct: 243 IFDVAGFEIAAHRVIGLLRDVVAEFGVEKTSQMDIVDLGGGLGISYLPDDNPPPMSELAA 302 Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 ++ +EPG AI T V + + + Sbjct: 303 KLRAIVARESAAVGLPAPKLVVEPGRAIAGPGTITLYEVGTVKDVAVSPTSHRRYVSVDG 362 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L E + + P + V G+ C +GDI + V+ GD + Sbjct: 363 GMSDNIRTSLYGAEYDVRLLSRVSDATPTLSRVVGKHCESGDIVVRDAWLSEDVRPGDLL 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I P + +R + D + Sbjct: 423 GVAATGAYCYSMSSRYNLIGRPAVVAVRDGRARLILRRETVEDLLS 468 >gi|330996966|ref|ZP_08320831.1| diaminopimelate decarboxylase [Paraprevotella xylaniphila YIT 11841] gi|329572040|gb|EGG53711.1| diaminopimelate decarboxylase [Paraprevotella xylaniphila YIT 11841] Length = 386 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 66/366 (18%), Positives = 118/366 (32%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L LDT KN + A+K A + + G S Sbjct: 13 VRTPFYYYDTELLRKTLDTIKSETGKNDNYHVHYAVKANANRKLLRIICAAGFGADCVSG 72 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK 117 E+ F + + K V + ++ +L A + K Sbjct: 73 GEIKACLDAGFPADKIVFAGVGKSDWEINVGLDAGIAYFNVESLPELEVINQLAGEKDKI 132 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 RINP V ++ G D + GL FH + Sbjct: 133 ARVSFRINPDVGAHTHANITTGLAENKFGIAMADMEKVIEIAASLKHVEFVGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFS 222 F+ + ++ ++ I++GGG+ + PV F + + Sbjct: 193 ILEMGDFVALCNRVNELQDRLERHHITVKNINVGGGLGIDYQHPNEVPVPHFADYFQTYR 252 Query: 223 EKYS----VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277 + Q++ E G A+V +L T VL + + K IVD+ + + L Sbjct: 253 KHLHLRPDQQLHFELGRAVVGQCGSLITRVLYVKQATYKQFAIVDAGMTDLIRPALYQAF 312 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + T V G C + D+F + GD ++ Y + +N Sbjct: 313 HSIENLSSDERKETYDVVGPICESSDVFVKAFDLNRCHRGDLLALRSAGAYGEIMASRYN 372 Query: 336 GINMPT 341 +P Sbjct: 373 CRELPA 378 >gi|315452641|ref|YP_004072911.1| putative Pyridoxal-dependent decarboxylase, NspC [Helicobacter felis ATCC 49179] gi|315131693|emb|CBY82321.1| putative Pyridoxal-dependent decarboxylase, NspC [Helicobacter felis ATCC 49179] Length = 400 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 121/395 (30%), Positives = 197/395 (49%), Gaps = 33/395 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+++ KL +NL ++ A VK+LLALK FA W F+ + + G +S ++ Sbjct: 7 IPSPCYVLELAKLQHNLAILERAQREAQVKILLALKGFAFWRSFEWVRSSLYGCCASGVH 66 Query: 62 EVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E +L +E+FG E ++ YK ++ +L IIFN+ +Q + +KD Q +K Sbjct: 67 EALLAYEEFGSRESGKEICVFSPGYKAEDMAQLLPIATHIIFNSFAQYHTYKDSIQAKNK 126 Query: 117 K----------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLM 162 K +GLRINP S + ++ +P P SRLG + + ++GL Sbjct: 127 KLEKLGLSPLKVGLRINPLFSRVQPMIYNPCAPHSRLGIAPAAFKQGMQQYGLEGISGLH 186 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 FH +CE + + + FG I +EW++ GGG H T + Y ++ Q ++ F Sbjct: 187 FHTHCEQDAPALQETLGHVQKH-FGFAIENMEWMNFGGGQHITKEGYLLEVLSQAVRAFR 245 Query: 223 EKYS--VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 Y I+LEPGEA+ + L +V+DI EN + I+D S+ H+PD L Sbjct: 246 ASYPNIQDIFLEPGEAVGWQSGFLLASVVDIVENEGRVAILDVSITNHMPDCLEMPYRPE 305 Query: 281 IYPNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + + G SCLAGD G + FE P+++GDR+ F+D+ Y+I + Sbjct: 306 VLHVDKNGKTQPELERGLAYYLGGASCLAGDYIGPYTFENPLEVGDRLLFQDMLHYSIVK 365 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 N FNG+ +P++ + G K ++ F Y Y + Sbjct: 366 NNTFNGVALPSLGLIVNGG-FKLLKSFEYAHYKDR 399 >gi|126640100|ref|YP_001083087.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 17978] gi|126373831|gb|ABO13852.1| YPPCP.09C-like protein [Acinetobacter baumannii ATCC 17978] Length = 416 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 58/402 (14%), Positives = 119/402 (29%), Gaps = 48/402 (11%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++ D + + V + A K + + + + S SL E+ Sbjct: 18 TPLWIYDADTITRQIAALQ----LFDV-VRFAQKANSNTHILRLMKRQGVVVDSVSLGEI 72 Query: 64 MLGHE-KFGG------ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLH 115 F + D A + + + ++ L++ A Sbjct: 73 ERALASGFTPGLHNGHADIVFTADLLDRATLARVVELNIPVNCGSMDMLDQLG--AVNPG 130 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCEN 169 + LRINP + + S+ G D + + K ++GL H Sbjct: 131 HPVWLRINPGFGHGHSKKTNTGGEHSKHGIWHGDLVRACEKIKSNSLTLHGLHMHIGSGV 190 Query: 170 KSFLCFSAMLKNIE--KEFGHFITQIEWISLGGGIHFTDKD-YPVKDFCQRLKEF----- 221 ++ + + IS GGG+ + P D + Sbjct: 191 DYTHLQEVCGAMLKLVEVVNAQGLDLHAISAGGGLSVPYQTGEPTIDIAHYFSLWNAARH 250 Query: 222 ----SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQ 276 ++ V++ +EPG ++ + L T V + N +VD+ V L Sbjct: 251 AVEQLLEHPVKLEIEPGRYLMAESGVLVTEVRATKQQGANHFLMVDAGFNDLVRPALYGA 310 Query: 277 ESATIYPNTG-------PYTAMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFED 322 ++ + +V G C +GD+F + ++GD + D Sbjct: 311 YHGMELIHSDGTAVNGLQFDTVVAGPLCESGDVFTQGDGGVVLHRSLPQAQVGDLLVLHD 370 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + R + + Sbjct: 371 TGAYGASMSSNYNARPLIAEVLMENGEPRLIRRRQTVAELLA 412 >gi|289583356|ref|YP_003481766.1| diaminopimelate decarboxylase [Natrialba magadii ATCC 43099] gi|289532854|gb|ADD07204.1| diaminopimelate decarboxylase [Natrialba magadii ATCC 43099] Length = 457 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 59/393 (15%), Positives = 126/393 (32%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P Y+ + + +N T + A+K + L + Sbjct: 49 DSPVYVFYEDDIRDNYRTLRSALDEHYPDSTIHFAVKANYNPAILSILRDEGCHAEVYAR 108 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + + + A+ + + + ++L + A+K + Sbjct: 109 GELAAAQTAGYDADDLLLTGMNRRPEDIERALETGVGHFLVDNATELERLVAAARKTDVR 168 Query: 118 IGLRINPSVSY--SKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 + I + S ++ G + + +E ++ G+ H Sbjct: 169 PRVLIRCNPSMEVPTHPEVATATLETKFGLDIDSGRAMAVTEKAVAAEEIDLAGIQLHIG 228 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY--PVKDFCQRLKE 220 + +S + M +I+ + LGGG+ D + + + Sbjct: 229 SQIQSAEPYGVAARDMCAFAVDIRDELGVEIDVLDLGGGLPVPYDDDVPAPETIIETIAT 288 Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273 + ++LEPG +V N TL V + E V + V Y Sbjct: 289 NVKDSLSATDMSLPTLFLEPGRRLVGNAGTLLARVGVVKETPYATFAVLDAGTNTVSSYW 348 Query: 274 LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 Y A + + + G C +GD+ E P++ GD I+ + + Y++ + Sbjct: 349 PYPIYA-LSEAEPTESYHLAGPLCYSGDVLAEDVSLPPLERGDTIAIDRIGAYSLGSASH 407 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNN 365 N P I + +G ++ IR+ S + N Sbjct: 408 TNAQPKPPIVLLRSNGDVETIRQPESVEEIIGN 440 >gi|152965219|ref|YP_001361003.1| diaminopimelate decarboxylase [Kineococcus radiotolerans SRS30216] gi|151359736|gb|ABS02739.1| diaminopimelate decarboxylase [Kineococcus radiotolerans SRS30216] Length = 463 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 61/408 (14%), Positives = 119/408 (29%), Gaps = 46/408 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP +++D+ +A G + A K F A G+ + Sbjct: 52 GTPLFVVDELDFRTRAVAFRDAFADAFADLCGGADVYYASKAFTATGVTRWIAADGLHLD 111 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK 113 ++S E+ LG A + K A+ I+ ++ ++++ D A++ Sbjct: 112 TASAGELELGLRGGVPPARIALHGNNKSRREIVRALEVGVGRIVVDSPAEIDVIADLARE 171 Query: 114 --LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLM 162 + + LR+ V + G + + GL Sbjct: 172 RGVVAPVMLRVTVGVEAHTHQYIATAHEDQKFGVSLASGQAEAAVARILARPELRLLGLH 231 Query: 163 FHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218 H + F +L+ K ++ + LGGG + Sbjct: 232 SHIGSQIFDLGGFEVSARRLLELHHKVERDHGVELPELDLGGGYGVAYTSEDAPLAPTEI 291 Query: 219 KEFSEKYSVQIYL-----------EPGEAIVTNTTTLNTTVLDISE------NIKNLVIV 261 + + L EPG AI +T V E + V V Sbjct: 292 AGRLAEIVARECLVQGIAVPRVSVEPGRAIAAPSTFTLYEVGTTKEVELDGGTRRRYVSV 351 Query: 262 DSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGD 316 D + ++ L + A+ + V G+ C +GD+ F + GD Sbjct: 352 DGGMSDNIRTALYGADYSATVASRASTAPGVLSRVVGKHCESGDVVVRDEFLPEDLGGGD 411 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 ++ Y + + +N + P + +R + D Sbjct: 412 LLAVPGTGAYCRSMASNYNQLPRPGVVAVRDGSATVLVRRETPEDLLA 459 >gi|307710846|ref|ZP_07647273.1| protein tabA [Streptococcus mitis SK321] gi|307617291|gb|EFN96464.1| protein tabA [Streptococcus mitis SK321] Length = 416 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G ++ D E TI + + + A Sbjct: 79 ELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HITNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|123968729|ref|YP_001009587.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. AS9601] gi|123198839|gb|ABM70480.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. AS9601] Length = 457 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 56/397 (14%), Positives = 124/397 (31%), Gaps = 35/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L + + + A K ++ M + ++ G + S Sbjct: 49 DSPLYILDETTLRMSCRAYKKALEKYYPGETLPIYASKANSSIFMSNLVSSEGLGLDAVS 108 Query: 60 LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E++ + E ++ D EID + N II + L + ++ + L+ Sbjct: 109 EGELLTALKGGVPNEKIVFHGNNKSDKEIDFAIKNNIKIIVDNDYDLKRLEEVSNSLNHD 168 Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE 168 + + I P + S+ G + + +++ + G+ H + Sbjct: 169 LEIMIRFTPGIECHTHEYIRTGSFDSKFGFGIEYLNNLFANISDTKHLKLRGIHAHIGSQ 228 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF---- 221 + + + K F I+ +++GGG+ + Sbjct: 229 IFELEPHKDLGEIMVKVILDAKKFGHNIKELNVGGGLGIKYTKNDDPPSIDEWVKTISTS 288 Query: 222 ----SEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 +K++ ++ EPG +IV+ + E VD + + Sbjct: 289 VVEACKKHNLDLPKLMCEPGRSIVSTAGITIYKIGAFKEIPGIRTYLSVDGGMSDNPRPI 348 Query: 273 LLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + G+ C +GD+ + K GD I YN Sbjct: 349 TYQSNYSACLVKNPLNINSKNKYTIAGKHCESGDVLLKEIELANCKTGDLICVFGTGAYN 408 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 ++ + +N I P + + S D Sbjct: 409 VSMSSNYNRIPRPAALLVCDGEAEIIQKRESPFDLLR 445 >gi|313891660|ref|ZP_07825267.1| putative diaminopimelate decarboxylase [Dialister microaerophilus UPII 345-E] gi|313119938|gb|EFR43123.1| putative diaminopimelate decarboxylase [Dialister microaerophilus UPII 345-E] Length = 415 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 121/391 (30%), Gaps = 28/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ D++ + +N++ + A+K + L+ G SS+ Sbjct: 21 GTPFYIYDQKGIEDNINNFEKSFSWCSNFYKYFAVKATPNPWILKLLHNMGIGADCSSMA 80 Query: 62 EVMLGHE-KFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L G+ ++ D E S I + +S + + + +KI Sbjct: 81 ELILAEAVGLKGKEIVFSSNNTADEEFIKANSLGAIINLDDISMFEDLERL-KIIPEKIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS-------- 171 R NP S ++ G + +ES + Sbjct: 140 FRYNPGNKVSIGNNFIGKPEDAKYGMTKEQLLESVQIAKKLKIPFIGIHTMIVSSELTLD 199 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + F +++I GGGI + L + + + + Sbjct: 200 VLIANIRMLFELAIEIREKFNVIVDFIDFGGGIGIPYRPDDRAVNLFELGKRTHELFKSM 259 Query: 230 Y---------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 E G AI L T + K + VD+ + + + Sbjct: 260 MSGFEKTQLSFECGRAITGPYGYLVTKAIHHKNIYKKYIGVDACMADLMRPGIYGAYHEI 319 Query: 281 IYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + G C D F + GD I D + + +NG Sbjct: 320 TVCSKEDTNETEIYDIVGSLCENNDKFAINRKLPKISKGDLIVIHDTGAHGHSMGFNYNG 379 Query: 337 INMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DGTI+ IR + ND ++ L Sbjct: 380 KLRHQELLLHSDGTIQKIRRNETLNDLFSTL 410 >gi|160891934|ref|ZP_02072937.1| hypothetical protein BACUNI_04392 [Bacteroides uniformis ATCC 8492] gi|270296403|ref|ZP_06202603.1| diaminopimelate decarboxylase [Bacteroides sp. D20] gi|317480402|ref|ZP_07939501.1| diaminopimelate decarboxylase [Bacteroides sp. 4_1_36] gi|156858412|gb|EDO51843.1| hypothetical protein BACUNI_04392 [Bacteroides uniformis ATCC 8492] gi|270273807|gb|EFA19669.1| diaminopimelate decarboxylase [Bacteroides sp. D20] gi|316903435|gb|EFV25290.1| diaminopimelate decarboxylase [Bacteroides sp. 4_1_36] Length = 386 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 65/366 (17%), Positives = 123/366 (33%), Gaps = 28/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + + A+K A + + + G S Sbjct: 13 LRTPFYYYDTKVLRDTLSCIRTEAARYGNYSVHYAVKANANPKVLAIIRENGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F + K + + D FN +V +L + A + Sbjct: 73 GEIRAAIKAGFPTGKIVFAGVGKADWEINLGLDYDIFCFNVESVPELEIINELAAAKGKV 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCE 168 + RINP+V ++ G +D + GL FH + Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMQDMDHVIDIAQNMKNLRFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F+ + ++ + +IE +++GGG+ +P + K + E Y Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARHIRIEHVNVGGGLGIDYG-HPNRQPIPDFKSYFETY 251 Query: 226 --------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQ 276 ++ E G A+V +L + VL + + + D+ + + L Sbjct: 252 NSHLKLRPHQTLHFELGRAVVGQCGSLISQVLYVKQGTNKQFAILDAGMTDLIRPALYQA 311 Query: 277 ES--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I + V G C + D+FG+ VK GD I+ Y + + Sbjct: 312 FHKIENITSDAPVQAYDVVGPICESSDVFGKAIDLNGVKRGDLIALRSAGAYGEIMASGY 371 Query: 335 NGINMP 340 N +P Sbjct: 372 NCRELP 377 >gi|320354419|ref|YP_004195758.1| diaminopimelate decarboxylase [Desulfobulbus propionicus DSM 2032] gi|320122921|gb|ADW18467.1| diaminopimelate decarboxylase [Desulfobulbus propionicus DSM 2032] Length = 418 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 52/387 (13%), Positives = 110/387 (28%), Gaps = 23/387 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D+ + + + A+K + + G SS+ Sbjct: 23 GTPFHIYDEAGIRETGRRLKAAFADIPEFREYYAVKALPNPSVLAIMQDMGFGFDCSSIT 82 Query: 62 EVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ML E + + + A + + ++ ++K + + + Sbjct: 83 ELMLARELGAKPDDIMFTSNNTSAEDFAAAAADGGCILNLDDITLIDKVPTMPELVCFRY 142 Query: 119 GL-RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS- 176 R + ++ GL + Sbjct: 143 NPGRRRTGNDIIGKPEEAKYGVSHEQIVEAYRLAQARGAKRFGLHTMLASNELHYSYMVQ 202 Query: 177 ---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----------KEFSE 223 +L+ +E E+I++GGG+ + + + Sbjct: 203 TAAMLLELVETISKELGITFEFINIGGGLGIPYLPDIDPLNIEAMGEEITALFVDFKDHH 262 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 Y +Y+E G + L ++ + + + VD+ + A + L Sbjct: 263 GYCPALYMESGRYMTGPHGALVVRAINRKDIYRTYIGVDACMSALMRPALYGAYHHIEVL 322 Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T V G C D F + GD + +D + +NG P Sbjct: 323 GKEGGEMETVDVVGSLCENNDKFAVQRPLPRITDGDILIIQDSGAHGHAMGFNYNGKMRP 382 Query: 341 TIAVKNVDGTIKAIREFS-YNDYYNNL 366 + DG ++ IR DY+ L Sbjct: 383 QELLLGKDGVVRMIRREERPEDYFATL 409 >gi|317125576|ref|YP_004099688.1| diaminopimelate decarboxylase [Intrasporangium calvum DSM 43043] gi|315589664|gb|ADU48961.1| diaminopimelate decarboxylase [Intrasporangium calvum DSM 43043] Length = 475 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 58/409 (14%), Positives = 109/409 (26%), Gaps = 47/409 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++D+ G + A K F + + Sbjct: 61 GTPAYVLDEDDFRARAREFKQTYAEVFDDLCGGADVYYAGKAFLCTEVARWIRDEGLFLD 120 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK 113 + E+ + G + + K A+ II ++ ++ + A + Sbjct: 121 VCTGGELAVAIRAGVPGSSIGMHGNNKSAAEIRAALDHGVSRIIVDSFEEIERVAAIAAE 180 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK----------DKIESEIKNVNGL 161 L + +R+ V + G + + GL Sbjct: 181 LGVIAPVLVRVTVGVEAHTHEFIATAHEDQKFGFSLAGGHAIEAVRQVLARPDTLRLLGL 240 Query: 162 MFHNNCENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 H + F + + ++ + LGGG + Sbjct: 241 HSHIGSQIFDTAGFEVSARRVLGLHTQIARELGVELPELDLGGGFGIAYTTEHDPQSPKA 300 Query: 218 LKEFSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKN------LVI 260 L + + +EPG AI +T V + + V Sbjct: 301 LAVGMAEIVERECRADGVAVPRISIEPGRAIAGPSTFTLYEVGTVKPVELDGGASRLYVS 360 Query: 261 VDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIG 315 VD + ++ L + A P A V GR C +GDI + F V G Sbjct: 361 VDGGMSDNIRTALYDADYSCTVANRRSEATPSLARVVGRHCESGDIVVKDEFLPGDVGPG 420 Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 D ++ Y + +N P + +R + +D Sbjct: 421 DLVAVPGTGAYCRALSSQYNHTPRPPVIAVRDGQARVIVRRETIDDLLA 469 >gi|254774332|ref|ZP_05215848.1| diaminopimelate decarboxylase [Mycobacterium avium subsp. avium ATCC 25291] Length = 472 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 50/406 (12%), Positives = 114/406 (28%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + G + A K F + +++ + E Sbjct: 64 GTPLFVVDEDDFRSRCREIASAFGG-GNNVHYAAKVFLCSEVARWIDEEGLSLDVCTGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F E ++ K AV + ++ ++++++ + A Sbjct: 123 LAVALHADFPPERITFHGNNKSVAELTAAVKAGVGHVVLDSMTEIERLDAIAADAGIVQD 182 Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + + V + G ++E + GL H + Sbjct: 183 VFVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAALAAVGRVFDTEHLRLVGLHSHIGSQ 242 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F ++ + F + I + LGGG+ + L Sbjct: 243 IFDVAGFELAARRVIGLLHDAVEQFGVEKTAQIATVDLGGGLGISYLAADEPPPMGELAG 302 Query: 221 FSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + +EPG AI T V + + + Sbjct: 303 KLSAIVQHESAAVRLPTPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 362 Query: 265 -VEAHVP----DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318 + ++ D + + A + G+ C +GDI + ++ GD I Sbjct: 363 GMSDNIRTALYDAQYDARLVSRVSDAPAELARIVGKHCESGDIVVRDTWVPGDLRPGDLI 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + P + +R + +D + Sbjct: 423 GVAATGAYCYSLSSRYNMVCRPAVVAVRDGRARLVLRRETVDDLLS 468 >gi|283777952|ref|YP_003368707.1| diaminopimelate decarboxylase [Pirellula staleyi DSM 6068] gi|283436405|gb|ADB14847.1| diaminopimelate decarboxylase [Pirellula staleyi DSM 6068] Length = 422 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 56/397 (14%), Positives = 114/397 (28%), Gaps = 43/397 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + +D + A K + + D + + + S E Sbjct: 27 GTPTYVYDAAIIEERIDDLAKFDV-----IRYAQKACSNIAILDLMRKKGVVVDAVSTGE 81 Query: 63 VMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + Y D + A + D + + L++ A K Sbjct: 82 IHRAMAAGYKPGSKNHEIVYTADIFDRDALATVVKLDIPVNCGSPDMLDQLG--AVKPGA 139 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENK 170 + LRINP + + S+ G + + K ++G+ H Sbjct: 140 HVTLRINPGFGHGHSQKTNTGGEQSKHGIWHEQLTDCLQKADRHGLMISGIHMHIGSGTD 199 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK-- 224 S + +E+ I IS GGG+ + + + ++ Sbjct: 200 -LEHLSQVCSAMERVVLEVGRSITTISAGGGLPIPYNDKQTYVDLDQYFELWDASRKRLE 258 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA 279 + + + +EPG +V + L + + I + N + + ++ L Sbjct: 259 AALGHKISLEIEPGRYLVAESGYLVSEIRAIKQMGNNTFYLLDAGFNNLARPILYGSYHP 318 Query: 280 TIYPN-----TGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAGYN 327 +V G C +GDIF + +IG+ + E Y Sbjct: 319 MSIVPLDAGERADRDVVVGGPLCESGDIFTQEEGGYVCKRSLPSARIGEYLVLERAGAYG 378 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + + + D Sbjct: 379 FVMASNYNSKPLAAEVLIKNGTAHLVRERQTPADLIR 415 >gi|260599186|ref|YP_003211757.1| diaminopimelate decarboxylase [Cronobacter turicensis z3032] gi|260218363|emb|CBA33402.1| Diaminopimelate decarboxylase [Cronobacter turicensis z3032] Length = 420 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 112/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + +D + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRTQIDRLRQFDV-----IRFAQKACSNIHILRLMREAGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + D A + +V L + A ++ Sbjct: 82 RAIAAGYDPRQNPDDIVFTADVLDEATLARVHELGVPVNAGSVDMLEQLG--AVSPGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G D + + G+ H Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYSDLPAALAVMQRYQLKLIGMHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-------VKDFCQRLKEFSEKY 225 + + F +E IS GGG+ ++ R +E ++ Sbjct: 200 HLERVCGAMVSQVI-EFGQDLEAISAGGGLSIPYREGDETIDTGHYFGLWNRAREQIAEH 258 Query: 226 SVQIY---LEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 +EPG +V L V + ++ V++D+ + + Sbjct: 259 FGHPIKLEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPSMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E V+ GD + D Y Sbjct: 319 ALAADGRDLRDAPRLDTVVAGPLCESGDVFTQQEGGKVETRALPAVRPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + ++ Sbjct: 379 GASMSSNYNSRPLLPEVLLENGEARTIRRRQTIDELLA 416 >gi|332367400|gb|EGJ45133.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1059] Length = 416 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 120/392 (30%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G+ ++ E TI + + K+ A Sbjct: 79 ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169 V + D ++ G I++ + G+ + + Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKEFGAEKFGIHALLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + ++++I+L GG+ + ++ + + + Sbjct: 198 YYPELARQLFELAVEVVVETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317 Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + P V G C D F +IGD + D + + +N Sbjct: 318 HITNMVRPEGETEIVDVVGSLCENNDKFAINRALPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + DG ++ IR DY+ L Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409 >gi|291522849|emb|CBK81142.1| Diaminopimelate decarboxylase [Coprococcus catus GD/7] Length = 426 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 59/391 (15%), Positives = 119/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G K A+K + + + G ++ Sbjct: 20 PTPFHLYDEKGIRENARKVYKAFSWNKGFKEYFAVKATPNPAILQIMKEEGCGLDCATKV 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ F G ++ E I F+ ++ L F++ + + + Sbjct: 80 ELMMAKACGFTGHDVMFSSNVTPANEYAYAKDMGVIINFDDITHLKYFEENVGEFPETVC 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVN--GLMFHNNCENKSFL 173 R N + ++ G + + K V G+ K+ Sbjct: 140 CRFNTGGDFKISTAIMDVPGEAKYGFTREQLTEGFKYLKSKGVKHFGIHAFLASNTKTND 199 Query: 174 CF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + K + I++I+L GG+ + + + E K +I Sbjct: 200 YYPALAKILFKTAVELHEETGADIKFINLSGGVGVAYSPDETPNDIEVIGEGVHKVYDEI 259 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G ++ L T + K + +D+ + + Sbjct: 260 LVPAGMGDVAIFTEMGRFMLAPYGHLIATAIHEKHIFKEYIGLDACAANLMRPAIYGAYH 319 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F + +GD I D + + + Sbjct: 320 HITVAGKENEPCDHMYDVTGGLCENSDKFAVNRMLPKIDMGDYIIIHDTGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+ + IR + DY+ Sbjct: 380 NGKLRSAEVLLKEDGSTELIRRAETPMDYFA 410 >gi|288802899|ref|ZP_06408336.1| diaminopimelate decarboxylase [Prevotella melaninogenica D18] gi|288334716|gb|EFC73154.1| diaminopimelate decarboxylase [Prevotella melaninogenica D18] Length = 385 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 121/365 (33%), Gaps = 26/365 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I+TP+Y D L L ++K + A+K A + + Q G S Sbjct: 13 IETPFYYYDCDLLRETLQAINKELKKYENFIVHYAIKANANAKVLKVIQQTGMGADCVSG 72 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ + F + Y K + + D FN +V++L + A + Sbjct: 73 GEIQRCLDCGFPADKIVYAGVGKSDWEINLGLDHDIFCFNVESVAELEVINELAAKKGKT 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNC- 167 + RINP V ++ G + + GL FH Sbjct: 133 ANVCFRINPDVGAQTHEKITTGLAENKFGIAMQDMLPTILEASRMPNIHFIGLHFHIGSQ 192 Query: 168 --ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-- 223 E F + + I+ +I+ I++GGG+ + F Sbjct: 193 LLEMTDFRHLCSRINEIQDGLEQENIKIKNINVGGGLGIDYDNPDNHPIPDFKSYFYTFA 252 Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLY-- 275 + +++ E G A+V +L T L + + K IVD+ + + L Sbjct: 253 RYLKLREGQKLHFELGRAVVGQMGSLITRTLYVKQGTAKQFAIVDAGMTDLIRPALYQAS 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + + + V G C + D+F + V GD I+ Y + +N Sbjct: 313 HKIENLSSDGALHAYDVVGPICESSDVFAKGIELNTVHRGDLIAMRSAGAYGEIMASQYN 372 Query: 336 GINMP 340 +P Sbjct: 373 CRKLP 377 >gi|282924293|ref|ZP_06331967.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C101] gi|282313680|gb|EFB44073.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C101] Length = 404 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 60/376 (15%), Positives = 120/376 (31%), Gaps = 32/376 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G + +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAINKVQQSKYLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQDIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAVKNV 347 + +N + P++ Sbjct: 385 SNYNQMQKPSVFFFKR 400 >gi|254368983|ref|ZP_04984996.1| hypothetical protein FTAG_00817 [Francisella tularensis subsp. holarctica FSC022] gi|157121904|gb|EDO66074.1| hypothetical protein FTAG_00817 [Francisella tularensis subsp. holarctica FSC022] Length = 389 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 118/370 (31%), Gaps = 31/370 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D + L + A ++ A+K + +Y G S Sbjct: 23 TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 82 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--I 118 E+ E K + + + ID + ++ ++ AQ+ +K+ I Sbjct: 83 EIKRALEQKVDSQHIVFAGVEIELAIDNDIFA---FNSESLEEIQVINQIAQRKNKQVNI 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--------VNGLMFHNNCENK 170 LR+NP++ + + G D + + GL +H + Sbjct: 140 CLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANISIIGLHYHVGSQIL 199 Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF 221 ++ F K I+ I+ GGG+ + R +EF Sbjct: 200 NYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFREF 259 Query: 222 SEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESA 279 + ++ E G ++V + L + VL + VI+D+ + + L + Sbjct: 260 FKYCDELALHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQHK 319 Query: 280 TIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + G C + D+F +++ +K GD ++ Y + +N Sbjct: 320 IAALIDKNINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASEYN 379 Query: 336 GINMPTIAVK 345 Sbjct: 380 LRPSVQEYFI 389 >gi|322391328|ref|ZP_08064798.1| diaminopimelate decarboxylase [Streptococcus peroris ATCC 700780] gi|321145754|gb|EFX41145.1| diaminopimelate decarboxylase [Streptococcus peroris ATCC 700780] Length = 417 Score = 192 bits (487), Expect = 9e-47, Method: Composition-based stats. Identities = 58/392 (14%), Positives = 110/392 (28%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNKAFSWNKGFKEYFAVKATPNPTILKILQEEGCGVDCSSYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G ++ D E TI + + + A Sbjct: 79 ELLMSHKLGFSGSEMMFSSNNTPDREYTYAHELGATINLDAFEDIEHLERAAGIPEVISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFH------NNCEN 169 V + D ++ G + ++ K H Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKQQLFDAYKILKDKGAKRFGLHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +E+I+L GGI + + + E + + Sbjct: 198 YYPELARQLFELAVEVKEKLGISLEFINLSGGIGVNYRPEQEPNDIALIGEGVRQVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGVLVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 V G C D F +IGD + D + + +N Sbjct: 318 HITNMMHPDGQTEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTI-KAIREFSYNDYYNNL 366 + +G + R DY+ L Sbjct: 378 AKLRSAEILFTEEGKAKEIRRAERPEDYFATL 409 >gi|315611873|ref|ZP_07886792.1| diaminopimelate decarboxylase [Streptococcus sanguinis ATCC 49296] gi|315316051|gb|EFU64084.1| diaminopimelate decarboxylase [Streptococcus sanguinis ATCC 49296] Length = 419 Score = 192 bits (487), Expect = 9e-47, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 21 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 80 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G ++ D E TI + + + A Sbjct: 81 ELLMSHKLDFPGSEIMFSSNNTPDQEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 + + D ++ G E+ + ++ L + Sbjct: 141 RYNPGGIFELGTDIMDNPG-EAKFGMTKDQLFEAFAVLKEKGAKTFGIHSFLASNTVTHL 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 200 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAVIGEGVRKVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 260 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 319 Query: 279 A--TIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 320 HISNLTHPDGPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 379 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 380 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 411 >gi|291513977|emb|CBK63187.1| diaminopimelate decarboxylase [Alistipes shahii WAL 8301] Length = 387 Score = 192 bits (487), Expect = 9e-47, Method: Composition-based stats. Identities = 70/372 (18%), Positives = 128/372 (34%), Gaps = 27/372 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+YL D L L++ +Y K G K+ A+K + + +Y G +S E Sbjct: 14 ETPFYLYDMALLRQTLESVVYESKKYGYKVHYAIKANYDDHLLAVIREYGLGIDCASGNE 73 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + E F + Y K + + I ++ +L + + Sbjct: 74 LRKAVEAGFDPKGIVYAGVGKRDKELKYAIEQNILAINCESIQELELVDALSAEAGKVTD 133 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCENK 170 I LRINP + D + S+ G E + + N+ GL H + + Sbjct: 134 IALRINPDIDPKTNHCIDTGQADSKFGISYEEVLEHAAEIRSLKNVNIIGLHLHIGSQIR 193 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF 221 F M I + + ++ +GGG+ + Sbjct: 194 ELHVFENMCNKVNVIVENLEKLGCKFRFVDVGGGLGVNYDVPENEPIPNFASLFSIVHNH 253 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQESA 279 +++ E G +IV L TTVL + + LVIVD+S+ V + Sbjct: 254 LRIGDREVHFEFGRSIVAECGELITTVLFNKTTATGRKLVIVDASMTELVRPAMYGSYHN 313 Query: 280 TIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 V G +C + D+F E + GD ++ + Y ++ + +N Sbjct: 314 IENITAKDDEVREKYTVVGTACESTDVFDENVTLRRTHRGDLLTIKSAGAYGMSMASRYN 373 Query: 336 GINMPTIAVKNV 347 ++P + Sbjct: 374 LHDLPGAVYSDE 385 >gi|293526768|ref|ZP_06671453.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M1015] gi|290920840|gb|EFD97903.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M1015] Length = 397 Score = 192 bits (487), Expect = 9e-47, Method: Composition-based stats. Identities = 60/373 (16%), Positives = 120/373 (32%), Gaps = 32/373 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP + D+ ++ + K++G+K + A K F M + + S Sbjct: 26 GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E F ++ K +N + +++ ++ A + Sbjct: 86 GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + LR+NP V + S+ G + +S+ + G+ H + Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAINKVQQSKYLKLKGVHCHIGSQ 204 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F K + + Q+E ++LGGG + + + Sbjct: 205 IEGTEAFIETAKIVLRWLKEQDIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264 Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274 +EPG +IV V I E + V + H+ L Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324 Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 YQ + + G+ C +GDI + VK GD ++ Y+ + Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384 Query: 332 NWFNGINMPTIAV 344 + +N + P++ Sbjct: 385 SNYNQMQKPSVFF 397 >gi|270292095|ref|ZP_06198310.1| conserved hypothetical protein [Streptococcus sp. M143] gi|270279623|gb|EFA25465.1| conserved hypothetical protein [Streptococcus sp. M143] Length = 418 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 117/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNKAFSWNKGFKEYFAVKATPTPAILKILKEEGCGVDCSSYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G ++ D E TI + + + + A Sbjct: 79 ELLMSHKLGFAGSEMMFSSNNTPDKEYAYARELGATINLDAIEDIEHLERAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKAQLFEAFAVLKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKSGISLDFINLSGGIGVNYRPDQEPNDIAVIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGVLVTKVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HITNLTHPDGPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|148985558|ref|ZP_01818747.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71] gi|147922278|gb|EDK73399.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71] gi|301800739|emb|CBW33387.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae OXC141] Length = 416 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + G E + D E TI + + + A Sbjct: 79 ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGEARQIRRAERPEDYFATL 409 >gi|149280434|ref|ZP_01886554.1| diaminopimelate decarboxylase [Pedobacter sp. BAL39] gi|149228848|gb|EDM34247.1| diaminopimelate decarboxylase [Pedobacter sp. BAL39] Length = 384 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 68/363 (18%), Positives = 122/363 (33%), Gaps = 28/363 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP+Y D L N L K + A+K + + + G S Sbjct: 13 LETPFYYYDLALLQNTLSNCSAAAKVYNFHVHYAMKANFNPRVLEMIKATGFGADCVSGG 72 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 EV E F + + K A+ ++ +L + A + Sbjct: 73 EVKRAVEVGFNHQQIVFAGVGKSDREINDALDQQIFCFNVESIQELEVINELAGLKNTKA 132 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169 K+ +RINP+V ++ G + +SE G+ FH + Sbjct: 133 KVAIRINPNVDAHTHHNITTGLDENKFGINSWDLPQCAEVLKQSENLEFIGVHFHIGSQI 192 Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSE- 223 S F + F ++ +++GGG+ + + DF K + + Sbjct: 193 TSMDVFKNLCVRVNEFAAWFEERGFIVKVLNVGGGLGIDYHNPEQQIPDFEAYFKVYHDF 252 Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA 279 + + +++ E G A+V +L + VL + K IV D+ + + LYQ Sbjct: 253 LEVRSNQEVHFELGRALVGQCASLISKVLYVKNGKKKNFIVLDAGMTELMRPA-LYQAYH 311 Query: 280 TIYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I +G V G C + D FG+ GD I+ Y + + Sbjct: 312 QIDHLSGSKSAEGVKYDVVGPICESTDCFGKEVALPETFRGDLIALRSAGAYGEVMASHY 371 Query: 335 NGI 337 N Sbjct: 372 NLR 374 >gi|221194457|ref|ZP_03567514.1| Orn/DAP/Arg decarboxylase 2 [Atopobium rimae ATCC 49626] gi|221185361|gb|EEE17751.1| Orn/DAP/Arg decarboxylase 2 [Atopobium rimae ATCC 49626] Length = 429 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 114/393 (29%), Gaps = 31/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D+ +++ + N G + A+K + L G ++ Sbjct: 20 PTPFHIYDEAEIVRRVRLLQKAFSWNPGFREFFAIKATPNPTIIKLLRDLGCGCDCATAT 79 Query: 62 EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 E++L G + + + I + + D A L Sbjct: 80 ELVLADACGVTGSNIMLSSNDTPPEDFKRAAAQGAIINLDAGGDMLDTLDVALGGVLPDS 139 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS 171 I R NP ++ N ++ G + V GL + Sbjct: 140 ICARFNPGGTFESTNGIIGNPADAKFGMTEAQLFETFRVLRDRGVKVFGLHAFLASNARE 199 Query: 172 FLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + + + I ++ L GGI + + E + Sbjct: 200 QDYYPKLARILFELAVRLHRELGIHIGFVDLSGGIGVAYRPEEASADVCAIGEGVRRAYE 259 Query: 228 Q-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276 + IY E G ++ L T VL + + VD+ + + Sbjct: 260 EVLVSENMDDVAIYSELGRWLLAPAGGLVTRVLHEKVTYHDYLGVDACAANLMRPAIYDA 319 Query: 277 ESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + + V G C D F V +GD + D + + Sbjct: 320 YHHITVMGSEDVPADHVYSVVGGLCENNDQFARDRALPKVHVGDLLFIHDTGAHGFSMGY 379 Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 +NG + + D T++ IR + DY+ Sbjct: 380 NYNGKLRSAELLYHEDKTVELIRRAETMADYFA 412 >gi|315223132|ref|ZP_07865000.1| putative diaminopimelate decarboxylase [Streptococcus anginosus F0211] gi|315187821|gb|EFU21568.1| putative diaminopimelate decarboxylase [Streptococcus anginosus F0211] Length = 420 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 115/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 23 PTPFHLYDEKGIRETARALQKAFSWNQGFKEYFAVKATPNPTILKILKEEGCGVDCASYV 82 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G ++ E TI + + ++ A Sbjct: 83 ELLMSQKVGFSGNDMMFSSNDTPAEEIQFARELGATINLDAYEDVAFLQEVASIPEIISC 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169 V + D ++ G + I++ + V H + Sbjct: 143 RYNPGGVFELGTDIMDSP-EEAKFGMTKEQLIQAFKDLKKLGVKKFGIHALLASNTVTNH 201 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + +++I+L GG+ + + + + + +I Sbjct: 202 YYPELARQLFELAVEIVAETNVDLDFINLSGGVGVPYRPEEKANDILAIGQGVRRVYEEI 261 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G ++ L T VL + + + VD+S + + Sbjct: 262 LTPAGLGKVKIFTELGRFMLAPHGLLVTKVLHKKKTYRTYIGVDASAVNLLRPAMYGAYH 321 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F IGD + D + + +N Sbjct: 322 HITNMDHPDGPTEIVDVVGSLCENNDKFAIQRELPITNIGDTLVIHDTGAHGFSMGYQYN 381 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + DG ++ IR DY+ L Sbjct: 382 AKLRSAEILLEEDGGVRMIRRAEIPEDYFATL 413 >gi|148998508|ref|ZP_01825949.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70] gi|168484277|ref|ZP_02709229.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC1873-00] gi|168487115|ref|ZP_02711623.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC1087-00] gi|168576622|ref|ZP_02722488.1| diaminopimelate decarboxylase [Streptococcus pneumoniae MLV-016] gi|225857551|ref|YP_002739062.1| diaminopimelate decarboxylase [Streptococcus pneumoniae P1031] gi|307068586|ref|YP_003877552.1| diaminopimelate decarboxylase [Streptococcus pneumoniae AP200] gi|147755701|gb|EDK62747.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70] gi|172042473|gb|EDT50519.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC1873-00] gi|183569971|gb|EDT90499.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC1087-00] gi|183577610|gb|EDT98138.1| diaminopimelate decarboxylase [Streptococcus pneumoniae MLV-016] gi|225725810|gb|ACO21662.1| diaminopimelate decarboxylase [Streptococcus pneumoniae P1031] gi|301794920|emb|CBW37381.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae INV104] gi|306410123|gb|ADM85550.1| Diaminopimelate decarboxylase [Streptococcus pneumoniae AP200] gi|332072163|gb|EGI82649.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA41301] gi|332199403|gb|EGJ13480.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA47368] gi|332199989|gb|EGJ14063.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA47901] Length = 416 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + G E + D E TI + + + A Sbjct: 79 ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|238751492|ref|ZP_04612984.1| Diaminopimelate decarboxylase [Yersinia rohdei ATCC 43380] gi|238710359|gb|EEQ02585.1| Diaminopimelate decarboxylase [Yersinia rohdei ATCC 43380] Length = 420 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 114/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + ++ + A K + + + + S SL E+ Sbjct: 27 PVWAYDGDIITRKINQLRNFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 F + D ++ + + ++ L++ A + Sbjct: 82 RALHAGFQPGQEPAEIVFTADLLDQPTLLRVTELNIPVNAGSIDMLDQLGQHA--PGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSF 172 LR+NP + + S+ G +D + K + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPHAINKVKQYGLTLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + K+ I IS GGG+ + + + Sbjct: 199 QHLEQVCAAMVKQVIDLGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNHAREQIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V + +EPG +V + L V + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLIAQVRAVKEMGSRHYVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 282 YPN--------TGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E KIGD + F D Y Sbjct: 319 LLPADGRSLVAEPLIETVVAGPLCESGDVFTQEAGGGLETRALPAAKIGDYVVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416 >gi|289167176|ref|YP_003445443.1| diaminopimelate decarboxylase [Streptococcus mitis B6] gi|288906741|emb|CBJ21575.1| diaminopimelate decarboxylase [Streptococcus mitis B6] Length = 416 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 117/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILKEEGCGVDCSSYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G ++ D E TI + + + A Sbjct: 79 ELLMSHKLNFSGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPEQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HITNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR +DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPDDYFATL 409 >gi|229917988|ref|YP_002886634.1| diaminopimelate decarboxylase [Exiguobacterium sp. AT1b] gi|229469417|gb|ACQ71189.1| diaminopimelate decarboxylase [Exiguobacterium sp. AT1b] Length = 430 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 58/399 (14%), Positives = 117/399 (29%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ + +L L K L A K + +++ + S Sbjct: 24 GTPLYIMSEPELERRLGIVRDAFLDKFPNTYALYASKALSIAAVYEKVMAAGMSIDVVSR 83 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + E + + K A+ + + +++ A Sbjct: 84 GEMYVALHAGVPAERIHVHGSNKTILDITYALEQGITHFTIDNMREISLLSGLAAEYNRE 143 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + LRI P V ++ G D +E+E + G+ H Sbjct: 144 VDVLLRIVPQVVGGAHAAIQTGGVDTKFGFPTHDDTYLDAVRATLEAEHLQLKGIHCHVG 203 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + M++ ++ + +++GGG D + E Sbjct: 204 SQIQDPTLFINTVKTMVRFMDTIRQETSYTTDVLNIGGGFGVAYLDEDEYLDFAQTMEQV 263 Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + V+ +EPG +V N V + + V + ++ Sbjct: 264 METLVEEVEARELPLPKIGIEPGRWLVANAGATLYEVGTVKKVSGVRTFVSVDGGMTDNI 323 Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L E + A + G C +GDI PV GD + + Sbjct: 324 RPALYDAEYEVVAATRMNEEKTLEAKIVGACCESGDIISNRSLIPPVTSGDLLLVKATGA 383 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + P + +R ++ D Sbjct: 384 YNFSMASNYNQMLRPAVVFVKDGNHRLVVRRQTFEDLVA 422 >gi|13541637|ref|NP_111325.1| diaminopimelate decarboxylase [Thermoplasma volcanium GSS1] gi|14325036|dbj|BAB59962.1| diaminopimelate decarboxylase [Thermoplasma volcanium GSS1] Length = 409 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 63/381 (16%), Positives = 124/381 (32%), Gaps = 29/381 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP + +++ N+ + K ++K + + + + G+ +SL E Sbjct: 29 GTPVIIYSAPRIVKNVSSLFGAMPKV-TKCFYSVKANSNPNLVRLIGRQGCGSEVTSLGE 87 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 + + + + E + I FN+ Q ++ ++ Sbjct: 88 IQIAMISSIDPDDILFTPNNVSKEEMDFALDRGIKITFNSPGQFELVSNRVEEAT----F 143 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLC 174 RINP + + + S+ G + ++ + G+ N Sbjct: 144 RINPGIGHGEHPGTTTGGHGSKFGIDPETALKLYTRAKELGIRKFGIHMMVGSNNTDADL 203 Query: 175 FSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI- 229 K Q +I +GGG D ++L ++ Q Sbjct: 204 MLTFYKKFFDMASEIEKTAHLQFSYIDIGGGFGVPYNDEQRSLDIKKLGSGLKELVDQYG 263 Query: 230 ----YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT--IYP 283 ++EPG IV + L V D+ V D + ++ L E + Sbjct: 264 IERLFIEPGRYIVADAGILVGKVYDVYNG---FVGTDIGMNINIRHALYGAEHRFYALTG 320 Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + +V G+ C D+ G V+IGD ++ D Y + + +NG PT Sbjct: 321 RSDEAEYIVTGQICENTDVTG--RLTGKVQIGDLVAMYDAGAYIYSMSSNYNGRFRPTEV 378 Query: 344 VKNVDGTIKAIREFSYNDYYN 364 + + DG + R + ND Sbjct: 379 IVDHDGVYRIRRRETVNDILA 399 >gi|182684912|ref|YP_001836659.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CGSP14] gi|182630246|gb|ACB91194.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CGSP14] Length = 416 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 113/392 (28%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + G E + D E TI + + + A Sbjct: 79 ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYHPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HISNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRAAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|149012433|ref|ZP_01833464.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP19-BS75] gi|169833320|ref|YP_001695331.1| diaminopimelate decarboxylase [Streptococcus pneumoniae Hungary19A-6] gi|194396976|ref|YP_002038560.1| diaminopimelate decarboxylase [Streptococcus pneumoniae G54] gi|147763489|gb|EDK70425.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP19-BS75] gi|168995822|gb|ACA36434.1| diaminopimelate decarboxylase [Streptococcus pneumoniae Hungary19A-6] gi|194356643|gb|ACF55091.1| diaminopimelate decarboxylase [Streptococcus pneumoniae G54] Length = 416 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 112/392 (28%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + G E + D E TI + + + A Sbjct: 79 ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 V + D ++ G ++ + GL Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGLHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|284051896|ref|ZP_06382106.1| diaminopimelate decarboxylase [Arthrospira platensis str. Paraca] gi|291567171|dbj|BAI89443.1| diaminopimelate decarboxylase [Arthrospira platensis NIES-39] Length = 463 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 50/399 (12%), Positives = 112/399 (28%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ + + +L A K + + + GT S Sbjct: 53 GSPLYILDEVTVRTACRQYREAWEKYYPGESLILYASKAWNCLAVCAIVASEGLGTDVVS 112 Query: 60 LYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--- 114 E+ + + K + + ++ + L + A ++ Sbjct: 113 GGELYTANMAGVSPDKIYLHGNNKSRSELELAISTGCTVVADNWLDLTNLVELADQMSVT 172 Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNN 166 ++ +R P + S+ G E G+ H Sbjct: 173 SPVRVMIRFTPGIECHTHEYIRTGHLDSKFGFDPNQLDEVFKFVSSNPSLCCEGIHAHIG 232 Query: 167 CENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----- 218 + +L + + + I +++GGG+ + + Sbjct: 233 SQIFELQPHQDLAGVLMDAVTKGSQYGLNITEVNVGGGLGIRYTEDDDPPSIESWVSAIA 292 Query: 219 ------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 E + ++ EPG +I+ T+ E + + + Sbjct: 293 SSVVAACEQRQIPLPKLLCEPGRSIIGPAAITAYTIGSRKEIPDMRTYIAVDGGMSDNPR 352 Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAG 325 + N T V G+ C +GDI + + GD + Sbjct: 353 PITYQSVYRVVIANRMSAPLTETITVAGKHCESGDILIQQAHLPGDCQTGDILVVMATGA 412 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + P + N + I+ +Y+D Sbjct: 413 YNYSMASNYNRLPRPAAVLVNEGISTIIIQRETYSDLIR 451 >gi|222479105|ref|YP_002565342.1| diaminopimelate decarboxylase [Halorubrum lacusprofundi ATCC 49239] gi|222452007|gb|ACM56272.1| diaminopimelate decarboxylase [Halorubrum lacusprofundi ATCC 49239] Length = 453 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 61/405 (15%), Positives = 112/405 (27%), Gaps = 50/405 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D ++ N + +A V+ A+K + + + + +S E Sbjct: 35 GTPLYVQDLDRVRENSERLREAFPDADVR--YAVKAHTGRAVLEAVREAGLDAECASAGE 92 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLH 115 V FGG+ Y + TI V L++ ++ Sbjct: 93 VDRALAAGFGGDRLHYTAVNPPARDLDYVVGVAEAEPDLTITVGAVDTLDRLAER--GYD 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENK 170 ++ +R+NP V ++ G +E +V G+ H Sbjct: 151 GRVCVRVNPGVGAGHHEKVRTGGA-AKFGIPYDRAAEATRDAAERFDVVGIHAHAGSGID 209 Query: 171 SFLCFSAMLKNIEKE-FGHFI----------TQIEWISLGGGIHFTDKDY----PVKDFC 215 S + IE++ +GGG K+ + Sbjct: 210 PDQLDSHREMVTRMGGLARDLTDPDEGGVAPVDIEYVDVGGGFGVPYKEDAPALDLPAVA 269 Query: 216 QRLKEFSEKYS--VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDY 272 + +E V + +EPG +V + L T V + V+ VD+ + + Sbjct: 270 EATREAVAPLPAGVDLAIEPGRYVVADAGVLLTRVNTVKPTPDERVVGVDAGMTDLLRPA 329 Query: 273 LLYQESATIYPNTGPY---------------TAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 + G V G C GD GD Sbjct: 330 MYDAYHPIRNLGGGRESDGSDAPAIDDRSATPVTVAGPICETGDTLCTDRALADPVRGDL 389 Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 ++ Y +N P + R + +D Sbjct: 390 LAVGIAGAYGYEMATQYNSRPRPPEVALDDGTAAIVRRRETLDDL 434 >gi|325298093|ref|YP_004258010.1| diaminopimelate decarboxylase [Bacteroides salanitronis DSM 18170] gi|324317646|gb|ADY35537.1| diaminopimelate decarboxylase [Bacteroides salanitronis DSM 18170] Length = 386 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 120/366 (32%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y + L L+ K + A+K A + + + G S Sbjct: 13 VETPFYYYNADLLRETLNVIRTEAGKYNKFCVHYAIKANANPKILGIIRESGLGVDCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 +E+ F + K + + + D FN +V +L A + Sbjct: 73 WEIEAAIQAGFPASKIVFAGVGKTDKEINLALDHDIFCFNVESVPELEVINQLAAGKNKI 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168 ++ RINP V ++ G +E GL FH + Sbjct: 133 ARVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDRALEMNHVKFVGLHFHIGSQ 192 Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F A+ + + +E I++GGG+ + + F+ + Sbjct: 193 ILDMGDFIALCNRVNELQEKLYARQIIVEHINVGGGLGIDYAHPNRQSIPDFAEYFATYH 252 Query: 226 SV-------QIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--Y 275 ++ E G ++V +L T V+ + + K IVD+ + + L Y Sbjct: 253 KHLKLRPQQTLHFELGRSVVGQCGSLITRVIYVKQGTNKQFAIVDAGMTDLIRPALYQAY 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + I T V G C + D+FG+ GD ++ Y + +N Sbjct: 313 HKIENISSEEPVETYDVVGPICESSDVFGKAIDLNRTHRGDFLALRSAGAYGEIMASGYN 372 Query: 336 GINMPT 341 +P Sbjct: 373 CRPLPK 378 >gi|255656024|ref|ZP_05401433.1| diaminopimelate decarboxylase [Clostridium difficile QCD-23m63] gi|296450547|ref|ZP_06892301.1| diaminopimelate decarboxylase [Clostridium difficile NAP08] gi|296879331|ref|ZP_06903326.1| diaminopimelate decarboxylase [Clostridium difficile NAP07] gi|296260622|gb|EFH07463.1| diaminopimelate decarboxylase [Clostridium difficile NAP08] gi|296429874|gb|EFH15726.1| diaminopimelate decarboxylase [Clostridium difficile NAP07] Length = 430 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 122/399 (30%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D+ + N + + K+ A K F M + +N+ S Sbjct: 29 QTPLYVFDEALVRQNCREYIKYFRAREGKNKVAYAGKAFLPLYMCNLINEEQMCLDVVSG 88 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ F E ++ K E + + + +L+ + + Sbjct: 89 GELYTAYKSNFPMEKVFFHGNNKTKEEINMGLDLGVGKFVVDNFYELDLLEALCEDKGKT 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 ++I RI P + + S+ G + + + + GL H Sbjct: 149 QEIYFRITPGIEAHTHDYIKTGQIDSKFGFALVNGDLFRAIEKLSDYKNIKLVGLHAHIG 208 Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + M+ +++ F + I LGGG+ + + E Sbjct: 209 SQIFDVEPYIDTVDIMMNLVKEIKEKFNIHLTEIDLGGGVGVYYSEGDKPKTIKEFCETI 268 Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 + + +EPG +IV N + TV I + V V + +V Sbjct: 269 ITKAETSCKELGIEVPTLVIEPGRSIVANAGSTLYTVGSIKDIKDVRVYVSVDGGMTDNV 328 Query: 270 PDYLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L N + AM + G+ C +GDI +K GD + Sbjct: 329 RPSLYQASYECSIVNKINHKAMNHVTIAGKCCESGDILIGDINIMDIKSGDILITTSTGA 388 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I + + SY D Sbjct: 389 YGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQSYEDLLA 427 >gi|195940484|ref|ZP_03085866.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4024] Length = 420 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 118/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIVREKIAALHQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHE-KFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 F + + D A + + +V L + + ++ Sbjct: 82 RALAAGFDPKADSDAIVFTADLIDDATLARVHELQIPVNAGSVDMLEQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G + ++ + G+ H + Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYADMPAALEVLQRYNLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + ++ F +E IS GGG+ Y R + Sbjct: 199 GHLEQVCGAMVRQVIDFGQDLEAISAGGGLSIPYREGEEAIDTDHYYGLWSAARDSIAAH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 ++V++ +EPG +V L V + ++ V++D+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPSMYGSYHHIT 318 Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E VK GD + D Y Sbjct: 319 ALAADGRDLLNAPRIETVVAGPLCESGDVFTQQEGGKVETRSLPEVKPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGVARLIRRRQTIQELLA 416 >gi|291295185|ref|YP_003506583.1| diaminopimelate decarboxylase [Meiothermus ruber DSM 1279] gi|290470144|gb|ADD27563.1| diaminopimelate decarboxylase [Meiothermus ruber DSM 1279] Length = 393 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 50/369 (13%), Positives = 112/369 (30%), Gaps = 19/369 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+Y D + L+ ++ A+K G+ + + SL E Sbjct: 26 ETPFYAYDWPTIQERLERLQKAFPQT--EIFYAIKANPRLGLLKRFLERGVFVEAVSLGE 83 Query: 63 VMLGHEKF--GGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 V+ ++ E ++A + ++++ L + ++ Sbjct: 84 VLRAYQAGFRRNEVLLNGPVKTPAMLEALNRIGLPMLGLDSLADLERASRL--LPRARVL 141 Query: 120 LRINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFL 173 LR+NP + R S+ G + V GL H + Sbjct: 142 LRVNPDLPIVTHDHLATGRGESKFGILPEEVGPALELARRSRLEVLGLHIHLGSALEHPE 201 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + A + ++ + + + + + K+ ++++EP Sbjct: 202 DYQAGYRVMDGLYRTHGP----FEVMNLGGGFGLGLDLGALGAQAAALAHKHGAELWIEP 257 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY--TAM 291 G +V L T +N +++D+ + + L P T Sbjct: 258 GRYLVAEAGVLVTRCWGTKRTRRNYLLIDAGMSQLIRPMLYGAIHPVEPLYHNPRQATYD 317 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G +C +GD+ + GD ++ Y + + + P + G Sbjct: 318 LAGPACESGDVLARDITLPEPREGDLLAILQAGAYAGSMSSNYLDTPRPLELLWTGQGWE 377 Query: 352 KAIREFSYN 360 R S+ Sbjct: 378 VIRRRQSWE 386 >gi|15901801|ref|NP_346405.1| diaminopimelate decarboxylase [Streptococcus pneumoniae TIGR4] gi|111658864|ref|ZP_01409485.1| hypothetical protein SpneT_02000035 [Streptococcus pneumoniae TIGR4] gi|14973485|gb|AAK76045.1| diaminopimelate decarboxylase [Streptococcus pneumoniae TIGR4] gi|301802655|emb|CBW35421.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae INV200] gi|332199292|gb|EGJ13370.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA41317] Length = 416 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 113/392 (28%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + G E + D E TI + + + A Sbjct: 79 ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYHPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HISNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|271501924|ref|YP_003334950.1| diaminopimelate decarboxylase [Dickeya dadantii Ech586] gi|270345479|gb|ACZ78244.1| diaminopimelate decarboxylase [Dickeya dadantii Ech586] Length = 420 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 52/398 (13%), Positives = 118/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D ++ + + A K + + + Q S SL E+ Sbjct: 27 PLWAYDAATIVERIGQLRQFD-----TIRFAQKACSNLHILALMRQQGVKVDSVSLGEIE 81 Query: 65 LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + D + + ++ L++ +++ + Sbjct: 82 RALAAGFEPGTDAHEIVFTADVLDDATLQRVHELAIPVNAGSIDMLHQLGERS--PGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G D ++ + G+ H + Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQALEALSRYHLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEK---- 224 + + + ++ +E IS GGG+ + + + E+ Sbjct: 199 RHLEQVCEAMVQQVLAVGQDLEAISAGGGLSIPYHHGGERIDTQHYYGLWNQARERIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V + +EPG +V + L V + ++ V+VD+ + + Sbjct: 259 LGHPVALEIEPGRFLVAESGVLVAQVRAVKDMGSRHFVLVDAGFSDLMRPAMYGSYHHIT 318 Query: 282 Y--------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E ++GD + F D Y Sbjct: 319 LLPGDGRDLSQSPRRDTVVAGPLCESGDVFTQQAGGGVETMALPSAQVGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + ++ Sbjct: 379 GASMSSNYNSRPLIAEVLFEQGQPRLIRRRQTLDELLA 416 >gi|325188030|emb|CCA22573.1| diaminopimelate decarboxylase putative [Albugo laibachii Nc14] Length = 423 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 118/396 (29%), Gaps = 33/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP L D++ + +N + + + A+K + L+Q G SS Sbjct: 21 GTPLQLYDEKSIRDNARHLIDTFRRNFTDFREYFAVKALPNPAIIKILHQEGCGMDCSST 80 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDK--AQKLHK 116 E+ + E G+ + + E A+ I + ++ ++ + Sbjct: 81 AELHICKELGIEGKDIIFTSNFTSKEDLAIAYDQKVIINLDDITLVDALVEIRGKCPDLI 140 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENK 170 L + S+ + P ++ G +E+ K G+ Sbjct: 141 SFRLNPGLGRTDSETVSNILGGPDAKFGVAPFQIVEAYRKAKQAGAKRFGIHMMTGSCVM 200 Query: 171 SFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + +++ + E+++LGGG+ + + + + Sbjct: 201 DQDYWRQTVTILIDTVDQLRRELNIEFEFVNLGGGLGIPYQPDEKPVDIESISRMLRQLF 260 Query: 227 ------------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274 Q+ +E G + L T I E+ VD+ + + + Sbjct: 261 DEAKVKHNLSVLPQLCMENGRYMTGPFGWLITRCQAIKESYGRYYGVDACMANLMRPGMY 320 Query: 275 YQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 P + + V G C D F + ++GD D + + Sbjct: 321 NSYHHITIPARESSEERSPSHVVGTLCENNDWFAKNRSLPKAQVGDLFVIHDTGAHAHSM 380 Query: 331 KNWFNGINMPTIAVKNVDGT-IKAIREFSYNDYYNN 365 +NG + DGT +Y Y N Sbjct: 381 GFQYNGKLRAPELLILHDGTPFVIRERETYKSLYGN 416 >gi|89255705|ref|YP_513066.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica LVS] gi|167009944|ref|ZP_02274875.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FSC200] gi|254367082|ref|ZP_04983116.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica 257] gi|89143536|emb|CAJ78713.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica LVS] gi|134252906|gb|EBA52000.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica 257] Length = 389 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 118/372 (31%), Gaps = 35/372 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D + L + A ++ A+K + +Y G S Sbjct: 23 TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 82 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117 E+ E K + + + + D FN+ S AQ+ +K+ Sbjct: 83 EIKRALEQKVDSQHIVFAR-----FEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 137 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168 I LR+NP++ + + G D + N+ GL +H + Sbjct: 138 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 197 Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 ++ F K I+ I+ GGG+ + R + Sbjct: 198 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 257 Query: 220 EFSEKYSVQI-YLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277 EF + + + E G ++V + L + VL + VI+D+ + + L + Sbjct: 258 EFFKYSDELVLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 317 Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G C + D+F +++ +K GD ++ Y + Sbjct: 318 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 377 Query: 334 FNGINMPTIAVK 345 +N Sbjct: 378 YNLRPSVQEYFI 389 >gi|95929053|ref|ZP_01311798.1| Orn/DAP/Arg decarboxylase 2 [Desulfuromonas acetoxidans DSM 684] gi|95134954|gb|EAT16608.1| Orn/DAP/Arg decarboxylase 2 [Desulfuromonas acetoxidans DSM 684] Length = 421 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 55/391 (14%), Positives = 120/391 (30%), Gaps = 34/391 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D+ + + + G + A+K + + + G SS+ Sbjct: 23 GTPFHIYDEAGIRETGEHLKQVFSGIDGFREYFAVKALPNKQILKLMKEMNFGYDCSSIP 82 Query: 62 EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+++ E E + + A + + +S ++K + ++ Sbjct: 83 ELIMSRELGADTEDIMFTSNNTSPEEFAFAEQDGGCILNLDDISLIDKVPN-----FPEL 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCE---- 168 + N ++ G + +++ K GL Sbjct: 138 ICFRYNPGPRRTGNIIIGNPVEAKYGITHEQVVDAYRKAKERGATRFGLHTMVASNELDY 197 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---- 224 +L E + E++++GGG + + + Sbjct: 198 TYMVETARMVLSLAELVKAELDIEFEFVNIGGGFGIPYNPDQAPLDIDTMAKEVTELFDA 257 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + ++Y+E G + L T ++ + +N + VDS + A + L Sbjct: 258 FKTKNGFVPRMYMESGRFMTGPHGCLVTRAINHKDTYRNYIGVDSCMSALMRPALYEAYH 317 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 T V G C D F + GD + D + + Sbjct: 318 HIDVVGKDNAPKEMTYDVVGSLCENNDKFAVQRELPKIDEGDLLVIHDSGAHGHAMGFQY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG P + DG+++ IR + +DY+ Sbjct: 378 NGRLRPQELLLRCDGSVELIRRAETVDDYFA 408 >gi|115314200|ref|YP_762923.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica OSU18] gi|156501657|ref|YP_001427722.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FTNF002-00] gi|290953447|ref|ZP_06558068.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica URFT1] gi|295313328|ref|ZP_06803951.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica URFT1] gi|115129099|gb|ABI82286.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica OSU18] gi|156252260|gb|ABU60766.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 389 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 118/372 (31%), Gaps = 35/372 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D + L + A ++ A+K + +Y G S Sbjct: 23 TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 82 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117 E+ E K + + + + D FN+ S AQ+ +K+ Sbjct: 83 EIKRALEQKVDSQHIVFAG-----FEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 137 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168 I LR+NP++ + + G D + N+ GL +H + Sbjct: 138 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 197 Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 ++ F K I+ I+ GGG+ + R + Sbjct: 198 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 257 Query: 220 EFSEKYSVQI-YLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277 EF + + + E G ++V + L + VL + VI+D+ + + L + Sbjct: 258 EFFKYSDELVLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 317 Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G C + D+F +++ +K GD ++ Y + Sbjct: 318 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 377 Query: 334 FNGINMPTIAVK 345 +N Sbjct: 378 YNLRPSVQEYFI 389 >gi|238764774|ref|ZP_04625716.1| Diaminopimelate decarboxylase [Yersinia kristensenii ATCC 33638] gi|238696972|gb|EEP89747.1| Diaminopimelate decarboxylase [Yersinia kristensenii ATCC 33638] Length = 420 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 120/398 (30%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + ++ + + A K + + + + S SL E+ Sbjct: 27 PVWAYDGEVITQKINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D ++ + + ++ L++ A + Sbjct: 82 RALQAGFLPGQEPAEIVFTADLLDHATLLRVTELNIPVNAGSIDMLDQLGQHA--PGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G +D I+ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLTQAIEKIQQYGLTLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + ++ I IS GGG+ + + + + Sbjct: 199 QHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNRAREKIAAY 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 ++V + +EPG +V + L V + + ++ V+VD+ + + Sbjct: 259 LGHAVSLEIEPGRFLVAESGVLIAQVRAVKNMGSRHYVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E KIGD + F D Y Sbjct: 319 LLPADGRLLAGEPLIDTVVAGPLCESGDVFTQEAGGGLETRALPAAKIGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416 >gi|229827756|ref|ZP_04453825.1| hypothetical protein GCWU000182_03148 [Abiotrophia defectiva ATCC 49176] gi|229787955|gb|EEP24069.1| hypothetical protein GCWU000182_03148 [Abiotrophia defectiva ATCC 49176] Length = 418 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 67/393 (17%), Positives = 123/393 (31%), Gaps = 30/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N N G K A+K + L + GT SSL Sbjct: 20 PTPFHIYDEKGIRENARNLKKAFSWNKGFKEYFAVKATPNPYILSILKEEGCGTDCSSLT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ GE ++ E I + ++ ++ K+ A K I Sbjct: 80 ELMMSEACGITGENIMFSSNVTPAEEYVKARELGAIINLDDITHIDFLKECAGIPEK-IS 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVN--GLMFHNNCEN---- 169 R NP + N ++ G E+ + V G+ Sbjct: 139 CRYNPGGVFKVSNDIMDNPGDAKYGMTKVQMFEAFTRLKELGVKEFGIHSFLVSNTVTND 198 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + K + I +I+L GG+ + + + E K +I Sbjct: 199 YYPMLAAELFKLATELKEKCDVHISFINLSGGVGIPYRPEQEANDIFVIGEGVRKAFEEI 258 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G ++ L T + K + VD+ + + Sbjct: 259 LVPSGMGDVSIFTELGRFMLAPFGHLVTKAVHEKHIYKEYIGVDACAANLMRPAMYGAYH 318 Query: 279 ATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + V G C D F + +GD + D + + Sbjct: 319 HITVLGKEADKAEFKYDVTGSLCENNDKFAIDRMLPKIDMGDYLVIHDTGAHGFAMGYNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG +K +G +K IR + DY+ L Sbjct: 379 NGRLRSAELLKTENGEVKLIRRAETPMDYFATL 411 >gi|322831543|ref|YP_004211570.1| diaminopimelate decarboxylase [Rahnella sp. Y9602] gi|321166744|gb|ADW72443.1| diaminopimelate decarboxylase [Rahnella sp. Y9602] Length = 419 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 117/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + + + A K + + + + S SL E+ Sbjct: 27 PVWAYDAEIIKQRIAQLRQFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGH-EKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 F + D ++ D + ++ L++ K + Sbjct: 82 RALVAGFIPGGTDSEIVFTADVLDQPTLERVTALDIPVNAGSIDMLSQIGQ--HKAGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSF 172 LR+NP + + S+ G D ++ + + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYADLPQALTEIARYGLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK---- 224 + + ++ IE IS GGG+ + E+ Sbjct: 199 GHLEQVCDAMVRQVIETGHDIEAISAGGGLSIPYHFEEESIDTGHYFGLWNRAREQIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + +++ +EPG +V + L + + + ++ V+ D+ + + Sbjct: 259 LGHEIKLEIEPGRFLVAESGVLVAQIRAVKNMGSRHFVLCDAGFNDLMRPAMYGSYHHIS 318 Query: 282 YPNTGPYTA--------MVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 ++ G C +GD+F E PV IGD + F D Y Sbjct: 319 LLPADGRDVSGQPLTDSVIAGPLCESGDVFTQQAGGGVETFPLPPVHIGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + Sbjct: 379 GASMSSNYNTRPLLPEVLFENGVPRLIRRRQTVEELIA 416 >gi|307707662|ref|ZP_07644142.1| diaminopimelate decarboxylase [Streptococcus mitis NCTC 12261] gi|307616274|gb|EFN95467.1| diaminopimelate decarboxylase [Streptococcus mitis NCTC 12261] Length = 416 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G ++ D E TI + + + A Sbjct: 79 ELLMSHKLNFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HITNLTHLEGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLIIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|309790697|ref|ZP_07685248.1| diaminopimelate decarboxylase [Oscillochloris trichoides DG6] gi|308227291|gb|EFO80968.1| diaminopimelate decarboxylase [Oscillochloris trichoides DG6] Length = 445 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 56/399 (14%), Positives = 119/399 (29%), Gaps = 37/399 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID+ L + + A ++ A K + Q G S Sbjct: 34 TPLYIIDEVTLRGAMRAYRHALARHYPAPSRVHYASKALLNIAVAQVAQQEGLGLDLVSA 93 Query: 61 YEVMLGH-EKFGG-ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+++ H + A D E A+ ++ + + +L + + Sbjct: 94 AELLVARRAGVDMTSIHLHGNAKSDAELHRALDWGVGAVVVDNLDELERLIALSAGHPQP 153 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCE 168 + + LR+ P ++ ++ G + + + ++ GL H + Sbjct: 154 QPVLLRVAPDIAAHTHAHIATGAADAKFGFPLAALPVAIERILAAPGLHLRGLHAHIGSQ 213 Query: 169 NKSF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------- 216 ++ + + + +E +S GGG+ D Sbjct: 214 IFELGQLAATVQVLVAALAQIRAQYGVTLEELSPGGGLGVPYTDAMPATDIDGYAQALAA 273 Query: 217 ---RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN---LVIVDSSVEAHVP 270 + + +EPG +I+ V+ + VD + ++ Sbjct: 274 ATQQACAAHNFPLPLLTVEPGRSIIARAGVALYRVVARKFAADGRLLYLHVDGGMADNIR 333 Query: 271 DYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L + N V GR C +GDI ++GD ++ Y Sbjct: 334 PALYAARYTALLANRADAPPTAPVSVAGRYCESGDILLRDAPLPAAQLGDVLAVAGAGAY 393 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 ++ + +N P + + N R + D Sbjct: 394 TLSMASTYNMSPRPALLLLNAGQVQVIQRRETEEDLLAR 432 >gi|302346264|ref|YP_003814562.1| diaminopimelate decarboxylase [Prevotella melaninogenica ATCC 25845] gi|302150973|gb|ADK97234.1| diaminopimelate decarboxylase [Prevotella melaninogenica ATCC 25845] Length = 385 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 122/365 (33%), Gaps = 26/365 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I+TP+Y D L L ++K + A+K A + + + Q G S Sbjct: 13 IETPFYYYDCDLLRETLQAINKELKKYENFIVHYAIKANANAKVLNVIQQTGMGADCVSG 72 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ + F + Y K + + D FN +V++L + A + Sbjct: 73 GEIQRCLDCGFPADKIVYAGVGKSDWEINLGLDHDIFCFNVESVAELEVINELAAKKGKT 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNC- 167 + RINP V ++ G + + GL FH Sbjct: 133 ANVCFRINPDVGAHTHEKITTGLAENKFGIAMQDMLPTILEASRMSNIHFIGLHFHIGSQ 192 Query: 168 --ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-- 223 E F + + I+ +I+ I++GGG+ + F Sbjct: 193 LLEMTDFRHLCSRINEIQDGLEQENIKIKNINVGGGLGIDYDNPDNHPIPDFKSYFYTFA 252 Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLY-- 275 + +++ E G A+V +L T L + + K IVD+ + + L Sbjct: 253 RYLKLREGQKLHFELGRAVVGQMGSLITRTLYVKQGTAKQFAIVDAGMTDLIRPALYQAS 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + + + V G C + D+F + V GD I+ Y + +N Sbjct: 313 HKIENLSNDGALHAYDVVGPICESSDVFAKEIELNTVHRGDLIAMRSAGAYGEIMASQYN 372 Query: 336 GINMP 340 +P Sbjct: 373 CRKLP 377 >gi|307709729|ref|ZP_07646180.1| protein tabA [Streptococcus mitis SK564] gi|307619431|gb|EFN98556.1| protein tabA [Streptococcus mitis SK564] Length = 416 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 62/391 (15%), Positives = 115/391 (29%), Gaps = 29/391 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP++L D++ + N G K A+K + L + G SS E Sbjct: 20 TPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYVE 79 Query: 63 VMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +++ H+ F G ++ D E TI + + + A Sbjct: 80 LLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISCR 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN----K 170 V + D ++ G ++ + N G+ Sbjct: 140 YNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGANTFGIHSFLASNTVTHLY 198 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-- 228 + + + +++I+L GGI + + + E K + Sbjct: 199 YPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEVL 258 Query: 229 ---------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 I+ E G ++ L T V E + + VD+S + + Sbjct: 259 TPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYHH 318 Query: 280 --TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + GP V G C D F +IGD + D + + +N Sbjct: 319 ITNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLIIHDTGAHGFSMGYQYNA 378 Query: 337 INMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 379 KLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|152971771|ref|YP_001336880.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896361|ref|YP_002921097.1| diaminopimelate decarboxylase [Klebsiella pneumoniae NTUH-K2044] gi|150956620|gb|ABR78650.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548679|dbj|BAH65030.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 420 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 117/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAQLSQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 E + D + + ++ L++ + + ++ Sbjct: 82 RALAAGYDPQQNPEDIVFTADLIDDATLDRVKALQIPVNAGSIDMLSQLGEVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G + + + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLPAALEVMRRYQLQLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222 + + ++ F ++ IS GGG+ Y + + + Sbjct: 199 GHLEQVCGAMVRQVVDFGQDLQAISAGGGLSIPYREGEEAIDTAHYYGLWNRAREQIAAH 258 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V++ +EPG +V + L + V + ++ V++D+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAESGVLVSQVRSVKEMGSRHFVLIDAGFNDLMRPAMYGSYHHIT 318 Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E V GD + D Y Sbjct: 319 ALAGDGRDLSAAPQVETVVAGPLCESGDVFTQQEGGKVETRLLPAVAPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDGGKARLIRRRQTIQELLA 416 >gi|225861795|ref|YP_002743304.1| diaminopimelate decarboxylase [Streptococcus pneumoniae Taiwan19F-14] gi|298230174|ref|ZP_06963855.1| diaminopimelate decarboxylase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254780|ref|ZP_06978366.1| diaminopimelate decarboxylase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503748|ref|YP_003725688.1| diaminopimelate decarboxylase [Streptococcus pneumoniae TCH8431/19A] gi|225728238|gb|ACO24089.1| diaminopimelate decarboxylase [Streptococcus pneumoniae Taiwan19F-14] gi|298239343|gb|ADI70474.1| possible diaminopimelate decarboxylase [Streptococcus pneumoniae TCH8431/19A] gi|327389142|gb|EGE87488.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA04375] Length = 416 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 112/392 (28%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + G E + D E TI + + + A Sbjct: 79 ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 V + D ++ G ++ + GL Sbjct: 139 RYNPGGVFELGTDIMDNP-EEAKFGMTKDQLFEAFAILKEKGAKTFGLHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|169628249|ref|YP_001701898.1| diaminopimelate decarboxylase LysA [Mycobacterium abscessus ATCC 19977] gi|169240216|emb|CAM61244.1| Probable diaminopimelate decarboxylase LysA [Mycobacterium abscessus] Length = 448 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 120/398 (30%), Gaps = 41/398 (10%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y++D++ + + +++ A K + + Q S E+ Sbjct: 51 TPAYVLDEEDFRHRARRYRSTLRE--IEVAYAGKALLTADIARWVAQEGLSLDVCSSGEL 108 Query: 64 MLGHEK-FGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 F E + D DA I+ ++ + + A +L K+ + Sbjct: 109 ATALAGGFDPERIIMHGNAKTPDELSDAAAVGVGRIVVDSYT---EIMFLATRLAKRQRV 165 Query: 121 --RINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169 R+ P + + G E + ++ + N+ GL H + Sbjct: 166 LVRVTPDIDIHGHAAVTTGVTDQKFGFPLHEGHAIEAARRVLDQPLLNLVGLHCHIGSQV 225 Query: 170 KSF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 M+ + + +++GGG + + L++F + Sbjct: 226 TDCALYGETIRRMIAAMADIRARHGVILGELNIGGGHGVPYRSGDPELDLAELRDFIDDA 285 Query: 226 -----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSVEAH 268 ++ +EPG AI V+ + + + Sbjct: 286 LDAACAAERFPRPRVVVEPGRAISARAGVTLYRVVSVKTQPGGRTFVAVDGGMSDNPRVS 345 Query: 269 VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYN 327 + A +P+ P V GR C +GD V+ GD ++ Y+ Sbjct: 346 LYSAKYSVALANRHPSAPPQLVTVAGRHCESGDEIARDVSLPSDVRPGDVLAVACTGAYH 405 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + +R + D + Sbjct: 406 HSMASSYNLVGRPPVVAVRDGRVRELVRRETIADLLSR 443 >gi|282881322|ref|ZP_06290002.1| diaminopimelate decarboxylase [Prevotella timonensis CRIS 5C-B1] gi|281304798|gb|EFA96878.1| diaminopimelate decarboxylase [Prevotella timonensis CRIS 5C-B1] Length = 392 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 70/364 (19%), Positives = 120/364 (32%), Gaps = 28/364 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +TPYY D Q L LD K+A ++ ALK A + ++Q G S Sbjct: 14 QTPYYYYDTQLLHRTLDAIKRETDKHAHFEVHYALKANAHPQLLQQISQAGFGADCVSGG 73 Query: 62 EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ F + D A+ + ++ +L A + + Sbjct: 74 EITAALKAGFPANKIVFAGVGKRDDEIRLALQQHIFCFHVESLEELEVVNALAAQEQQVA 133 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 LRINP+V ++ G + + GL FH + Sbjct: 134 RVALRINPNVGAHTHAHITTGLSENKFGIPLTQMNTAIDACSRLEHITLIGLHFHIGSQI 193 Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP-------VKDFCQRLK 219 F + + I + E + +I++GGG+ D F + Sbjct: 194 TDMSDFVSECQRINELQTELNQHDIHLRYINVGGGLGVNYDDPDGGAIPDFQAYFDTFAQ 253 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++V +L + VL I E K I+D+ + + LYQ Sbjct: 254 HLHYTKEQTIHFELGRSVVAQCGSLISKVLYIKEGEHKKFCIIDAGMTELLRPA-LYQAH 312 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + T V G C + D+ + GD ++ Y + + +N Sbjct: 313 HKIENRSSQGALETYDVVGPICESSDVMAQGVLLPSCHRGDILAIRSAGAYGESMASQYN 372 Query: 336 GINM 339 G + Sbjct: 373 GRPL 376 >gi|159896546|ref|YP_001542793.1| diaminopimelate decarboxylase [Herpetosiphon aurantiacus ATCC 23779] gi|159889585|gb|ABX02665.1| diaminopimelate decarboxylase [Herpetosiphon aurantiacus ATCC 23779] Length = 443 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 61/401 (15%), Positives = 127/401 (31%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLN---NLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP YL+D + + AL + V + A K G+ ++ G S Sbjct: 41 GTPLYLLDAETIRTIAMRYSAALRHAYGSNVSIHYASKALLNVGVARLVHSLGLGLDVVS 100 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEID---AVLSNCDTIIFNTVSQLNKFKDKA--QKL 114 E+ + H + + AV + I+ + + QL D + Sbjct: 101 GGELAIAQRAGMPLDHVHLHGNGTPPAELAQAVEAGIGRIVVDNLDQLKWLADYCAKRPT 160 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHN 165 + I LRI P V+ ++ G D +++ N+ GL H Sbjct: 161 PQTILLRIAPDVTAGAHAHIRTGAASAKFGMPLDDGTAAEAVRLALQAPGLNLVGLHAHI 220 Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPV--------KD 213 + + + M+ + + W S GGG+ Sbjct: 221 GSQMRDWAALREMIGRLLAFADQQRRERSWLLTEFSPGGGLAVAYMPNEQAGDIETYANT 280 Query: 214 FCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAH 268 ++ E+Y + + +EPG ++V +V + + +D + + Sbjct: 281 IANAVRLGCERYQIPLPRLIIEPGRSLVARAGVALYSVTGHKTVVGGSDYLHIDGGMGDN 340 Query: 269 VPDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L + + GR C +GD+ ++G+ ++ Sbjct: 341 LRPSLYNAQYTAALVARPCAPPIAPVQLAGRFCESGDVLIREVALPAAEVGELVAVPVAG 400 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y ++ + +NG+ P + + + + R +Y D Sbjct: 401 AYTLSMASAYNGVPRPALVLLDRGQAMLIQRRETYADLMAR 441 >gi|307705628|ref|ZP_07642479.1| protein tabA [Streptococcus mitis SK597] gi|307620804|gb|EFN99889.1| protein tabA [Streptococcus mitis SK597] Length = 416 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 62/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G ++ D E TI + + + A Sbjct: 79 ELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HITNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLLIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|295097387|emb|CBK86477.1| diaminopimelate decarboxylase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 430 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 118/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 37 PVWVYDAQIVREKIAALHQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 91 Query: 65 LGHE-KFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 F + + D A + + +V L + + ++ Sbjct: 92 RALAAGFDPKADSDAIVFTADLIDDATLARVHELQIPVNAGSVDMLEQLGQVS--PGHRV 149 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G + ++ + G+ H + Sbjct: 150 WLRINPGFGHGHSQKTNTGGENSKHGIWYADMPAALEVLQRYNLKLVGIHMHIGSGVD-Y 208 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + ++ F +E IS GGG+ Y R + Sbjct: 209 GHLEQVCGAMVRQVIDFGQDLEAISAGGGLSIPYREGEEAIDTDHYYGLWSAARDSIAAH 268 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 ++V++ +EPG +V L V + ++ V++D+ + + Sbjct: 269 LGHAVKLEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPSMYGSYHHIT 328 Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E VK GD + D Y Sbjct: 329 ALAADGRDLVNAPRIETVVAGPLCESGDVFTQQEGGKVETRSLPEVKPGDYLVLHDTGAY 388 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 389 GASMSSNYNSRPLLPEVLFDNGVARLIRRRQTIQELLA 426 >gi|86609104|ref|YP_477866.1| diaminopimelate decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557646|gb|ABD02603.1| diaminopimelate decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 459 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 52/401 (12%), Positives = 110/401 (27%), Gaps = 39/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L G ++L A K + + Q G +S Sbjct: 49 GSPLYILDEWTLRRACQLYRDTWARCYAGGSRVLYATKAWNCLAICALALQEGLGLDVAS 108 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117 E+ GE + K + + ++ +++ +L + Sbjct: 109 GGELYTALQAGAKGEDLYLHGNAKSLDELNLALETGCTLVVDSLYELQQVSALTTPARPA 168 Query: 118 IGL-RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169 L R+NP + + S+ G E GL H + Sbjct: 169 RLLLRVNPGIDVHTHEYIRTGQTDSKFGIGQWQLPEVFDFLAAHPQLQCVGLHAHIGSQI 228 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + + + ++ +++GGG+ + E Sbjct: 229 FDLQGHRDLAGVLAQIWRQGLGRGLPLQELNVGGGLGIRYIESDDPPSIPEWVETVATAV 288 Query: 227 VQIY-----------LEPGEAIVTNTTTLNTTVL--------DISENIKNLVIVDSSVEA 267 Q + EPG +++ T+ D + + +D + Sbjct: 289 QQAFAQSGIPLPKVLCEPGRSVIGPAAVTAYTLGGQKRIPPSDDLPQGRTYITIDGGMSD 348 Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + A V G+ C +GD+ + G+ + Sbjct: 349 NPRPITYQARYTALLANRPEAEATQRVTVAGKHCESGDVLLKDVLLPAPMAGEVLVVLAT 408 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N P + N +R +Y D Sbjct: 409 GAYNYSMASNYNRFPRPAAVLVNEGEAQLIVRRETYADLIR 449 >gi|322385932|ref|ZP_08059573.1| diaminopimelate decarboxylase [Streptococcus cristatus ATCC 51100] gi|321270047|gb|EFX52966.1| diaminopimelate decarboxylase [Streptococcus cristatus ATCC 51100] Length = 416 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 54/392 (13%), Positives = 116/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + NA K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRARARALHEAFAWNADFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ + F G+ ++ E I + + K+ A Sbjct: 79 ELMMSQKLGFAGDEIMFSSNNTPAEEFRLARELGANINLDAYEDVAFLKEVAGIPKVISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169 V + D ++ G I++ G+ + + Sbjct: 139 RYNPGGVFELGTSIMDHP-EEAKFGMTKDQLIQAFKDLKELGAEKFGIHALLASNTVSND 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + ++++I+L GG+ + ++ + + + +I Sbjct: 198 YYPALARQLFELAVEVVEATGVELDFINLSGGVGVNYQPEGEENDIMIIGQGVRQAYEEI 257 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPFGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGAYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F +IGD + D + + +N Sbjct: 318 HITNMDRTEGPTEIVDVVGSLCENNDKFAIQRELPVSQIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + +G + IR DY+ L Sbjct: 378 AKLRSSEILLEENGQARMIRRAERPEDYFATL 409 >gi|206900405|ref|YP_002251079.1| diaminopimelate decarboxylase [Dictyoglomus thermophilum H-6-12] gi|206739508|gb|ACI18566.1| diaminopimelate decarboxylase [Dictyoglomus thermophilum H-6-12] Length = 425 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 56/390 (14%), Positives = 121/390 (31%), Gaps = 29/390 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++DK L +T + K K+L A+K + + G S+ Sbjct: 33 TPLYILDKSTLSFQANTYMDSWKKYYKNNYKVLFAIKALPILEVIRIFKNHGLGALVSTG 92 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + E ++ K N +I + + K K + Sbjct: 93 GELYIALSAGVSPENIYFHGNAKTLREIEYAIDQNIGALIIDNFDEYEKIKYLLSKKDAK 152 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCE 168 + +RI P++ + + ++ G + + + G+ H + Sbjct: 153 INVLVRIIPNIEVNTHRSIRTGQTDTKFGLPIDQALILIQKIKKEKNIIFKGIHSHIGSQ 212 Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224 + + + + + + +E +S+GGG+ + + L Sbjct: 213 IFDISAYVKLSEVLSEVYNELKSQNIAVEEMSIGGGLGVAYTEEDNPPNIEDLAREVSNK 272 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQ 276 ++ + EPG ++V + E V + ++ L Sbjct: 273 FKETIGHNFTLICEPGRSLVGRAGITLYRIESRKELPNIRKYVSVDGGMSDNIRPSLYGA 332 Query: 277 ESA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + I N + G+ C +GDI + GD + YN + W+ Sbjct: 333 KYSALVITKNEKETIFSIAGKHCESGDILIKDFKGPWPNPGDYLITFTTGAYNFSMYTWY 392 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N P + + ++ +Y D Sbjct: 393 NATLRPAVVLVENGKEKLIVKRENYEDLLR 422 >gi|289706374|ref|ZP_06502732.1| diaminopimelate decarboxylase [Micrococcus luteus SK58] gi|289556869|gb|EFD50202.1| diaminopimelate decarboxylase [Micrococcus luteus SK58] Length = 494 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 57/425 (13%), Positives = 108/425 (25%), Gaps = 62/425 (14%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP ++D+ A G + A K + Sbjct: 62 GTPLLVVDEDDFRARARAFREGFDAAFADLCGGADVYYAGKSMLTLSTARWAAEEGLRVD 121 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK 113 ++S E+ + + K A+ + II +++ +L A + Sbjct: 122 TASGGELAIALAAGVDPAHIGLHGNNKSDAELRTALEAGVGRIIVDSLDELTHLAALASE 181 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG----------- 160 + LR+ P V + G NV G Sbjct: 182 AGRRAPVMLRLTPGVHAHTHDFIATAHEDQKFGLSLAPASTDRDGNVAGRSPAAVAVAAA 241 Query: 161 ----------LMFHNNCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTD 206 + H + F +L+ + + ++ + LGGG Sbjct: 242 LAAESIELLGVHCHIGSQIFEAEGFGLAAGRVLEFLAEVKAEHGVELAELDLGGGHGIAY 301 Query: 207 KDYPVKDFCQRLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + + +I LEPG AI TV Sbjct: 302 TAVDEPRPAAEIADALADDVQKTVERLGLTCPRISLEPGRAISGPAGLTLYTVGVTKTVD 361 Query: 256 ----------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGD 301 + V VD + + L + + + V G+ C +GD Sbjct: 362 VDAPDGGTAARRYVAVDGGMSDNPRPVLYDADYTAVSARRTSEAEPLLSRVVGKHCESGD 421 Query: 302 IFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 I + + GD ++ Y + +N + P + + IR + Sbjct: 422 ILVRDVYLPADLGRGDLLAVPATGAYTHVMSSNYNALARPAVVAVSGGQARVIIRRETQE 481 Query: 361 DYYNN 365 D + Sbjct: 482 DLFAR 486 >gi|332706085|ref|ZP_08426157.1| diaminopimelate decarboxylase [Lyngbya majuscula 3L] gi|332355177|gb|EGJ34645.1| diaminopimelate decarboxylase [Lyngbya majuscula 3L] Length = 473 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 54/394 (13%), Positives = 115/394 (29%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ N +L A K + + N G S Sbjct: 66 GSPLYIVDEVTFRTACHQYREAFANYYPGESLVLYASKAWNCLAICAIANSESLGIDVVS 125 Query: 60 LYEVMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + ++ E++ C TI+ + +L + + + Sbjct: 126 GGELYTALQAGVSADKLYFHGNNKSTSELELATEICCTIVVDNWLELKALASL-PQENIR 184 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN- 169 I +R+ P + S+ G + N GL H + Sbjct: 185 IMIRLTPGIECHTHDYIRTGHLDSKFGFDPDTWDQVFTFISQHPTLNFVGLHAHIGSQIF 244 Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKYS 226 + + +L + + ++ I++GGG+ + +K + Sbjct: 245 ERQPHQDLAKVLVECIVKAADYDLPVQEINVGGGLGICYLESDDPPSIDDWVKGVCDSVV 304 Query: 227 VQI----------YLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLL 274 EPG +IV T+ + I+ + VD + + Sbjct: 305 AACTSRQLVLPKLLSEPGRSIVGPACVTAYTLGSSKVIPEIRTYLTVDGGMSDNPRPITY 364 Query: 275 YQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 ++ N + G+ C +GDI + + GD + YN + Sbjct: 365 QSVYRSVVANRMSAPLTEKITIAGKHCESGDILIKDATLPQTQPGDILVVMATGAYNYSM 424 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + P + ++ +Y D Sbjct: 425 ASNYNRLPRPAAVLVKDGEAQVIVQRETYQDLIR 458 >gi|262039855|ref|ZP_06013128.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042760|gb|EEW43758.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 420 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 51/398 (12%), Positives = 118/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAQLSQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 E + D + + ++ L++ + + ++ Sbjct: 82 RALAAGYDPQQNPEDIVFTADLIDDATLDRVKALQIPVNAGSIDMLSQLGEVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G + + + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLPAALEVMRRYQLQLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222 + + ++ F ++ IS GGG+ Y + + + Sbjct: 199 GHLEQVCGAMVRQVVDFGQDLQAISAGGGLSIPYREGEEAIDTAHYYGLWNRAREQIAAH 258 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 +SV++ +EPG +V + L + V + ++ V++D+ + + Sbjct: 259 LGHSVKLEIEPGRFLVAESGVLVSQVRSVKEMGSRHFVLIDAGFNDLMRPAMYGSYHHIT 318 Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRDLSAAPQVETVVAGPLCESGDVFTQQEGGKVETRLLPAVAPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDGGKARLIRRRQTIQELLA 416 >gi|300723903|ref|YP_003713214.1| diaminopimelate decarboxylase, PLP-binding [Xenorhabdus nematophila ATCC 19061] gi|297630431|emb|CBJ91096.1| diaminopimelate decarboxylase, PLP-binding [Xenorhabdus nematophila ATCC 19061] Length = 431 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 59/408 (14%), Positives = 124/408 (30%), Gaps = 55/408 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +L D ++ + + A K + + + + S SL E Sbjct: 27 GTPLWLYDGDNIIKQIKKLKQFDV-----IRFAQKACSNTHILRLMREQGVKVDSVSLGE 81 Query: 63 VMLGH-EKFGGET----HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 V F + D + + D + ++ L++ + + Sbjct: 82 VERALYAGFQPGRDKSEIVFTADVIDEATLSRVIELDIPVNVGSIDMLDQIGTR--QSGH 139 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 + LR+NP + + S+ G +D I + GL H Sbjct: 140 PVWLRLNPGFGHGHSQKTNTGGENSKHGIWYQDLPLAIEKIHQYGLKLAGLHMHIGSGVD 199 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKE 220 + +++ + ++ I+ IS GGG+ Y + ++ E Sbjct: 200 -YQHLASVCNAMVEQVILCGEDIQAISAGGGLSIPYNTGEEAVDTEHYYSLWHEARQRIE 258 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279 ++V++ +EPG +V + L V + +N V+VD+ + + Sbjct: 259 QHLGHAVELEIEPGRFLVAESGILMAEVRAVKSMGSRNYVLVDAGFSDLMRPAMYGSYHH 318 Query: 280 TIYPNTGP-----------------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIG 315 +V G C +GD+F + V++G Sbjct: 319 ISVLPVEQSENGTSMQEAGSQETLLQETLVAGPLCESGDVFTQLEGGEVVPRMLPSVRVG 378 Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 D + F D Y + + +N + + R + + Sbjct: 379 DYLIFHDTGAYGASMSSNYNSRPLIPEVLFIEGEVHLIRRRQTIEELL 426 >gi|260771626|ref|ZP_05880546.1| diaminopimelate decarboxylase [Vibrio metschnikovii CIP 69.14] gi|260613403|gb|EEX38602.1| diaminopimelate decarboxylase [Vibrio metschnikovii CIP 69.14] Length = 358 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 99/345 (28%), Gaps = 24/345 (6%) Query: 36 LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKD--CEIDAVLSN 92 +K + G+ +TL + G S E+ ++ K A+ Sbjct: 1 MKANSNLGVLNTLARLGSGFDIVSGGELERVLAAGGNPSKVVFSGVGKTAAEMKRALTLQ 60 Query: 93 CDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 + +L A +L + LRINP V ++ G + Sbjct: 61 IKCFNVESEPELLLLNQVAGELGVTAPVSLRINPDVDAHTHPYISTGLRDNKFGIAFERA 120 Query: 151 IESE-------IKNVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGG 200 E NV G+ H + + F + + I + +GG Sbjct: 121 PEVYRLANSLEHINVRGIDCHIGSQLTALEPFIDATDRLLALIDQLHAEGIAIAHLDVGG 180 Query: 201 GIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE----PGEAIVTNTTTLNTTVLDISENIK 256 G+ +D K + +LE PG AI N L T V + Sbjct: 181 GLGVVYRDERPPQPGDYAKALLARLHNHPHLELIFEPGRAIAANAGVLLTRVEFLKHTEH 240 Query: 257 NLV-IVDSSVEAHVPDYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV 312 I+D+++ + L T + G C GD G+ + Sbjct: 241 KNFAIIDAAMNDLMRPALYQAWQDIVPVAPRAGEAVTYDLVGPVCETGDFLGKDRALV-L 299 Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 + GD ++ Y + +N + + D + Sbjct: 300 EQGDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGDKIHLVRQRE 344 >gi|303254099|ref|ZP_07340214.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS455] gi|303260351|ref|ZP_07346321.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP-BS293] gi|303262499|ref|ZP_07348441.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP14-BS292] gi|303265130|ref|ZP_07351043.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS397] gi|303266008|ref|ZP_07351903.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS457] gi|303268060|ref|ZP_07353861.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS458] gi|302598932|gb|EFL65963.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS455] gi|302636399|gb|EFL66892.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP14-BS292] gi|302638517|gb|EFL68982.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP-BS293] gi|302642420|gb|EFL72766.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS458] gi|302644449|gb|EFL74701.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS457] gi|302645347|gb|EFL75581.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS397] Length = 416 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 113/392 (28%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + G E + D E TI + + + A Sbjct: 79 ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYHPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HISNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|222152576|ref|YP_002561751.1| pyridoxal-dependent decarboxylase [Streptococcus uberis 0140J] gi|222113387|emb|CAR41034.1| pyridoxal-dependent decarboxylase [Streptococcus uberis 0140J] Length = 412 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 118/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+ + N G K A+K + L + G ++ Sbjct: 19 PTPFHLYDEAGIRQKAREVNKAFSWNKGFKEYFAVKATPTPAILKILQEENCGVDCATEV 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+M+ HE + + E TI + Q+ ++ + K Sbjct: 79 ELMMSHELGFKDIMFSSNNTPAREYQYAQEVGATINLDAYEQIAYLEETSGLPEKISLRY 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN----KS 171 V + D + S+ G + ++++ G+ Sbjct: 139 NPGGVFALGTDIMDHPQ-DSKFGMTKEQLFQGYKELKAKGVKEFGIHSFLASNTVTNDYY 197 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------ 225 + + + + +I+L GGI ++ ++ +K Sbjct: 198 PQLARQLFQLAVQIKEELDISLSFINLSGGIGVNYLPDQKENDIAQIGLGVKKAFEEILV 257 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + IY E G ++ L T VL + K+ + VD+S + + Sbjct: 258 PNNLGHISIYTELGRFMLAPHGHLITRVLHRKKTYKDYIGVDASAVNLLRPAMYGSYHHI 317 Query: 281 IYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G C D F + + GD + D + + +NG Sbjct: 318 TNISNPDGEVELVDVVGSLCENNDKFAKDRELPQARPGDLLVIHDTGAHGFSMGYQYNGR 377 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + G ++ IR + DY++ Sbjct: 378 LRSAEMLLEESGQVRMIRRAETPEDYFS 405 >gi|253579002|ref|ZP_04856273.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849945|gb|EES77904.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 426 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 121/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G K A+K + L +Y G SS+ Sbjct: 20 PTPFHLYDEKGIRENAKAVKEAFAWNKGFKEFFAVKATPNPFLIQILQEYGCGCDCSSMT 79 Query: 62 EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ G+ + + E I + ++ + + + K I Sbjct: 80 ELMMSKAIGCKEGDIMFSSNDTPEEEFKYANEIGGIINLDDITHIESVERAVGYIPKVIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169 R NP + N ++ G + E+ G+ Sbjct: 140 CRYNPGGVFKISNDIMDNPGDAKYGMTTEQIFEAFKILKEKGAEEFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + M + K +++I+L GG+ K + + + E K + Sbjct: 200 YYPMLAKEMFEMAVKLQKETGAHVKFINLSGGVGIAYKPDQTPNDIREIGEGVRKVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + K + VD+ + + Sbjct: 260 LVPAGMGDVAIYTEMGRFMMGPYGCLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + V +GD + D + + Sbjct: 320 HITVMGKEDQPCDHMYDVTGSLCENNDKFAIDRYLPKVDMGDLLVIHDTGAHGFAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + + + DG+ + IR + DY+ Sbjct: 380 NGKLKSSEILLHEDGSFEMIRRAETPKDYFA 410 >gi|221124278|ref|XP_002160229.1| PREDICTED: similar to Ornithine decarboxylase [Hydra magnipapillata] Length = 361 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 105/357 (29%), Gaps = 29/357 (8%) Query: 36 LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFG--GETHAYNVAY-KDCEIDAVLSN 92 +K ++ + + G S E+ G+ V + A+ Sbjct: 1 MKANSSLAILQLFAKAGCGFDIVSEGELARVLAAGADAGKVIFSGVGKTRAEMARALEVG 60 Query: 93 CDTIIFNTVSQLNKFKDKA--QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD- 149 + ++++ + A I +R+NP+V ++ G + Sbjct: 61 IGCFNVESEAEIDVLNEVALGMGKQAPISIRVNPNVDPKTHPYISTGLKGNKFGIAHERT 120 Query: 150 ------KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGG 200 V G+ H + + + + I I GG Sbjct: 121 LLTYQRAAALPGLKVVGIDCHIGSQITEETPYLDAMDRMLDLVESIEAAGIGIHHIDFGG 180 Query: 201 GIHFTDKDYPVKDFCQRLKEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 G+ + K Q+ +EPG ++V N T VL + Sbjct: 181 GLGINYNGDTPPAADALWHKLLAKLDARGFGQRQLMIEPGRSLVGNAGVCVTEVLYMKPG 240 Query: 255 IKNLVIVDSSVEAHVPDYLLYQESATIYPNT-------GPYTAMVCGRSCLAGDIFGEFH 307 + + + +P +YQ TI P G V G C +GD G Sbjct: 241 EQKNFCIVDAAMNDLPRPAMYQAFHTIVPVKQAASQSSGAEVFDVVGPVCESGDWIGHDR 300 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + V+ GD+++ Y ++ + +N + + + + S+ D Sbjct: 301 TLQ-VQSGDKLAVLSAGAYCMSMSSNYNSRPKAAEVLVDGAHSHLIRQRDSFADQIR 356 >gi|118467936|ref|YP_889210.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2 155] gi|13124107|sp|Q9X5M1|DCDA_MYCS2 RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|4894689|gb|AAD32591.1|AF126720_2 meso-diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2 155] gi|118169223|gb|ABK70119.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2 155] Length = 474 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 49/406 (12%), Positives = 115/406 (28%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ G + A K F + +++ ++ E Sbjct: 64 GTPLFVIDEDDFRTRCRDIAAAFGG-GQYVHYAAKAFLCSEIARWVDEEGLSLDVATGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F + K AV + ++ ++ ++ + A + Sbjct: 123 LAVALHAGFPASRITVHGNNKSVAELTAAVQAGVGHVVLDSEIEIERLDQIAGAAGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ + GL H + Sbjct: 183 VLVRVTVGVEAHTHEFISTAHEDQKFGLSLATGAAMNAIRRVFATDNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + F + + + LGGG+ + + + L + Sbjct: 243 IFDVAGFEIAAHRVIGLLRDVVAEFGVEKTSQMSIVDLGGGLGISYLPHDDPPPMKELAD 302 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + + ++ +EPG AI T V + + + Sbjct: 303 KLLEIVRTESAAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVAVSQTAHRRYVSVDG 362 Query: 265 -VEAHVPD----YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ + + P A + G+ C +GDI + + GD I Sbjct: 363 GMSDNIRTSLYAAQYDARLVSRVSDAPPALARIVGKHCESGDIVVRDTWVSDDIAPGDLI 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + P + +R + D + Sbjct: 423 GVAATGAYCYSMSSRYNLLCRPAVVAVADGQARLVLRRETVEDLLS 468 >gi|145295320|ref|YP_001138141.1| hypothetical protein cgR_1260 [Corynebacterium glutamicum R] gi|140845240|dbj|BAF54239.1| hypothetical protein [Corynebacterium glutamicum R] Length = 445 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 51/402 (12%), Positives = 111/402 (27%), Gaps = 41/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + G + A K F + +++ +S+ E Sbjct: 42 GTPLFVVDEDDFRSRCRDMATAFGGPG-NVHYASKAFLTKTIARWVDEEGLALDIASINE 100 Query: 63 VMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F + K D V + ++ ++ +L A + + Sbjct: 101 LGIALAAGFPASRITAHGNNKGVDFLRALVQNGVGHVVLDSAQELELLDYVAAGEGKIQD 160 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + +R+ P + + + G +E N+ GL H + Sbjct: 161 VLIRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAFEAAKAANNAENLNLVGLHCHVGSQ 220 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-- 222 F + + + + LGGG + Sbjct: 221 VFDAEGFKLAAERVLGLYSQIHSELGVALPELDLGGGYGIAYTAVEEPLNVAEVASDLLT 280 Query: 223 ---------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267 + + +EPG AI +T V + + + Sbjct: 281 AVGKMAAELGIDAPTVLVEPGRAIAGPSTVTIYEVGTTKDVHVDDDKTRRYIAVDGGMSD 340 Query: 268 HVPDYLL---YQESATIYPNTG-PYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFED 322 ++ L Y G P + G C +GDI + + GD ++ Sbjct: 341 NIRPALYGSEYDARVVSRFAEGEPVNTRIVGSHCESGDILINDEIYPSDITSGDFLALAA 400 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N P + + +R + +D + Sbjct: 401 TGAYCYAMSSRYNAFTRPAVVSVRAGSSRLMLRRETLDDILS 442 >gi|154502727|ref|ZP_02039787.1| hypothetical protein RUMGNA_00541 [Ruminococcus gnavus ATCC 29149] gi|153796610|gb|EDN79030.1| hypothetical protein RUMGNA_00541 [Ruminococcus gnavus ATCC 29149] Length = 424 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 121/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N+ N G K A+K + D L +Y G SS Sbjct: 20 PTPFHLYDEKGIRENVKALREAFSWNEGYKEYFAVKACPNPFLIDILREYDCGCDCSSYT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML G+ ++ + I + + ++ + + + I Sbjct: 80 ELMLSDAIGVKGQDIMFSSNDTPAEDYVLAEKLGAIINLDDFTHIDFLEKTIGYIPETIS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 R NP + N ++ G + ++S+ G+ Sbjct: 140 CRYNPGGLFKISNDIMDNPGDAKYGMTTEQLFEAFKILKSKGAKEFGIHAFLASNTVTND 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + K I++I+L GGI + + + E + + Sbjct: 200 YYPMLAKVLFEQAVKLQKETGVHIKFINLSGGIGIPYTPDQEPNDIRVIGEGVRRVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L TT + K + VD+ + + Sbjct: 260 LVPAGMGDVAIYTELGRFMMGPYGCLVTTAIHEKHTHKEYIGVDACAVDLMRPAMYGAYH 319 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F ++ GD + D + + Sbjct: 320 HITVMGKEDAPHDHKYDVTGSLCENNDKFAIDRMLPEIEKGDYLVIHDTGAHGFAMGYSY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR DY+ Sbjct: 380 NGKLKHAELLLKEDGSVQMIRRAERPADYFA 410 >gi|306834154|ref|ZP_07467274.1| diaminopimelate decarboxylase [Streptococcus bovis ATCC 700338] gi|304423727|gb|EFM26873.1| diaminopimelate decarboxylase [Streptococcus bovis ATCC 700338] Length = 414 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 118/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+ + N G K A+K + L + G ++ Sbjct: 19 PTPFHLYDEMGIREKARALNKAFAWNKGFKEYFAVKATPTPAILKILQEEDCGVDCATEV 78 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+++ H+ + + E TI + + K+ A + LR Sbjct: 79 ELLMSHKLGFTDIMFSSNDTPAREFRYAKEIGATINLDAYEHIAFLKEAAGLPET-VSLR 137 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN----KS 171 NP ++ N S+ G I+ + + V G+ Sbjct: 138 YNPGGVFALGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKNFGIHSFLASNTVTNDYY 197 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--- 228 + + + + +I+L GG+ + + + + + + Sbjct: 198 PELARQLFELAVEVKEKTGVAVSFINLSGGVGVNYRPEQEPNDIAVIGKGVHRVFDEVLI 257 Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 PAGLGDVKIFTELGRFMLAPHGLLVTKVRHRKQTYRTYIGVDASAVNLMRPAMYDAYHHI 317 Query: 281 IY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 PN V G C D F + ++GD + D + + +NG Sbjct: 318 TNVSNPNGKLEVVDVVGSLCENNDKFAKQRELPEARVGDTLVVHDTGAHGFSMGYQYNGR 377 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + DG + IR + DY+ Sbjct: 378 LRSAEILYQEDGGARLIRRAETPEDYFA 405 >gi|325269420|ref|ZP_08136037.1| diaminopimelate decarboxylase [Prevotella multiformis DSM 16608] gi|324988341|gb|EGC20307.1| diaminopimelate decarboxylase [Prevotella multiformis DSM 16608] Length = 385 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 66/372 (17%), Positives = 123/372 (33%), Gaps = 26/372 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I+TP+Y D L L R +A + A+K A + +++ G S Sbjct: 13 IETPFYYYDCNLLRETLQAIHEEARTHADFIVHYAVKANANAKVLKMISRAGMGADCVSG 72 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116 E+ + F + Y K + + D FN +V++L+ A + K Sbjct: 73 GEIQRCLDSGFPAGSIVYAGVGKADWEINLALDHDIFCFNVESVAELDVINSLAARKGKV 132 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168 I RINP V + ++ G ++ GL FH + Sbjct: 133 ANICFRINPDVGAHTHKMITTGLAENKFGIAMQDMVPAIREAERMANIRFIGLHFHIGSQ 192 Query: 169 NKSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS--- 222 + + I+ ++ I++GGG+ + F Sbjct: 193 ILDMTDYRHLCSRINEIQDGLEEQGIEVRHINVGGGLGIDYERPDSHPIPDFKAYFYVFA 252 Query: 223 ----EKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277 + +++ E G A+V +L T L + + K IVD+ + + L + Sbjct: 253 HYLKLREGQKLHFELGRAVVGQMGSLITRTLYVKQGTAKQFAIVDAGMTDLIRPALYHAR 312 Query: 278 SA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + V G C + D+F + V GD I+ Y + +N Sbjct: 313 HEIENLSSDGPEQIYDVVGPICESSDVFAKDIPLNTVHRGDLIALRSAGAYGEIMASQYN 372 Query: 336 GINMPTIAVKNV 347 +P + + Sbjct: 373 CRRLPVGYLSDE 384 >gi|307132455|ref|YP_003884471.1| diaminopimelate decarboxylase, PLP-binding protein [Dickeya dadantii 3937] gi|306529984|gb|ADM99914.1| diaminopimelate decarboxylase, PLP-binding protein [Dickeya dadantii 3937] Length = 420 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 120/398 (30%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + ++ + + A K + + + Q S SL E+ Sbjct: 27 PLWAYDAETIIERIGQLRQFD-----TIRFAQKACSNLHILKLMRQQGVKVDSVSLGEIE 81 Query: 65 LGHE-KFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 F E D + V + ++ L++ +++ + Sbjct: 82 RALAAGFEPGTEAHEIVFTADVLDDATLQRVQELNIPVNAGSIDMLHQLGERS--PGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G D ++ + G+ H + Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQALEALSRYRLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222 + + ++ +E IS GGG+ Y + + + Sbjct: 199 GHLEQVCDAMVQQVLAVGQDLEAISAGGGLSIPYRHGGERIDTQHYYGLWNRAREQIAAH 258 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 ++ V + +EPG +V + L V + ++ V+VD+ + + Sbjct: 259 LEHPVALEIEPGRFLVAESGVLVAQVRAVKDMGSRHFVLVDAGFSDLMRPAMYGSYHHIT 318 Query: 282 Y--------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E ++GD + F D Y Sbjct: 319 LLPGDGRDLSQSALRDTVVAGPLCESGDVFTQQAGGGVETLPLPSAQVGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + ++ Sbjct: 379 GASMSSNYNSRPLIAEVLFEQGQPRLIRRRQTLDELLA 416 >gi|319901715|ref|YP_004161443.1| diaminopimelate decarboxylase [Bacteroides helcogenes P 36-108] gi|319416746|gb|ADV43857.1| diaminopimelate decarboxylase [Bacteroides helcogenes P 36-108] Length = 386 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 123/365 (33%), Gaps = 26/365 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D Q L + L + K + A+K A + + + G S Sbjct: 13 LRTPFYYYDTQVLRDTLSGIRTEVSKYDNYSVHYAVKANANPKVLAIIRENGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + K + N +V +L + A + Sbjct: 73 GEIRAAVKAGFPAGRIVFAGVGKADWEINIGLDYNIFCFNVESVPELEVINELAAVKGKV 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNNCE 168 + RINP+V ++ G +D E+KNV GL FH + Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMQDMDYVIDVAQEMKNVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-- 223 F+ + ++ + IE I++GGG+ + K F+ Sbjct: 193 ILDMGDFVALCNRINELQDKLEARRICIEHINVGGGLGIDYAHPNRQAIPDFKKYFTTYD 252 Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 + ++ E G ++V +L + VL + + + D+ + + L Sbjct: 253 EHLKLRSYQTLHFELGRSVVGQCGSLISRVLYVKQGTNKQFAILDAGMTDLIRPALYQAF 312 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + T V G C + D+FG+ VK GD I+ Y + +N Sbjct: 313 HKIENITSDAPMQTYDVVGPICESSDVFGKAIDLNTVKRGDFIALRSAGAYGEIMASSYN 372 Query: 336 GINMP 340 +P Sbjct: 373 CRELP 377 >gi|154482513|ref|ZP_02024961.1| hypothetical protein EUBVEN_00180 [Eubacterium ventriosum ATCC 27560] gi|149736643|gb|EDM52529.1| hypothetical protein EUBVEN_00180 [Eubacterium ventriosum ATCC 27560] Length = 418 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 60/391 (15%), Positives = 123/391 (31%), Gaps = 30/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N N G + A+K + L + G SS Sbjct: 20 PTPFHIYDEKGFMENARKVNEAFSWNKGFREYFAVKAEPNPFIIKKLKEAGCGVDCSSYT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+M+ + F + ++ E I + ++ ++ + + + + + Sbjct: 80 ELMIADKLGFRNDEIMFSSNETPAGEFKYCNDLGGIINLDDITMID-YMEAECGIPETVS 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169 R NP + N ++ G + +E+ + K V H Sbjct: 139 CRYNPGGVFEVCNGIMDNPGDAKYGMTPEQIVEAFKILKAKGVKNFGIHAFLASNTVTNE 198 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + K I++I+L GG+ + + + E K +I Sbjct: 199 YYPMLARTIFELAVKLEKETGADIKFINLSGGVGIPYRPDQEPNDIMAIGEGVRKVYEEI 258 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 Y E G ++ L T + K + VD+ + + Sbjct: 259 LKPEGMDDIAIYTEMGRFMMGPYGALVTKAVHEKHIYKEYIGVDACAVNLMRPAMYGAYH 318 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F + +GD I D + + + Sbjct: 319 HITVMGKEDQPKDHVYDVVGSLCENNDKFAVDRELPKIDMGDFIYIHDTGAHGFSMGYNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR + DY+ Sbjct: 379 NGRLRSAELLLKEDGSVEMIRRAETPADYFA 409 >gi|19552404|ref|NP_600406.1| diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC 13032] gi|62390068|ref|YP_225470.1| diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC 13032] gi|118302|sp|P09890|DCDA_CORGL RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|40514|emb|CAA30445.1| unnamed protein product [Corynebacterium glutamicum] gi|21323947|dbj|BAB98573.1| Diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC 13032] gi|41325404|emb|CAF19884.1| DIAMINOPIMELATE DECARBOXYLASE [Corynebacterium glutamicum ATCC 13032] Length = 445 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 50/402 (12%), Positives = 112/402 (27%), Gaps = 41/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + G + A K F + +++ +S+ E Sbjct: 42 GTPLFVVDEDDFRSRCRDMATAFGGPG-NVHYASKAFLTKTIARWVDEEGLALDIASINE 100 Query: 63 VMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F + K + V + ++ ++ +L A + + Sbjct: 101 LGIALAAGFPASRITAHGNNKGVEFLRALVQNGVGHVVLDSAQELELLDYVAAGEGKIQD 160 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + +R+ P + + + G +E N+ GL H + Sbjct: 161 VLIRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAFEAAKAANNAENLNLVGLHCHVGSQ 220 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-- 222 F + + + + LGGG + Sbjct: 221 VFDAEGFKLAAERVLGLYSQIHSELGVALPELDLGGGYGIAYTAAEEPLNVAEVASDLLT 280 Query: 223 ---------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267 + + +EPG AI +T V + + + Sbjct: 281 AVGKMAAELGIDAPTVLVEPGRAIAGPSTVTIYEVGTTKDVHVDDDKTRRYIAVDGGMSD 340 Query: 268 HVPDYLL---YQESATIYPNTG-PYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFED 322 ++ L Y G P + + G C +GDI + + GD ++ Sbjct: 341 NIRPALYGSEYDARVVSRFAEGDPVSTRIVGSHCESGDILINDEIYPSDITSGDFLALAA 400 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N P + + +R + +D + Sbjct: 401 TGAYCYAMSSRYNAFTRPAVVSVRAGSSRLMLRRETLDDILS 442 >gi|258645622|ref|ZP_05733091.1| diaminopimelate decarboxylase [Dialister invisus DSM 15470] gi|260402982|gb|EEW96529.1| diaminopimelate decarboxylase [Dialister invisus DSM 15470] Length = 424 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 129/393 (32%), Gaps = 28/393 (7%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP++L D++ + +N+ ++ A+K + +L + G SS Sbjct: 19 VYGTPFHLYDEKGISDNVKRLQKAFSWSSDFHEYFAVKATPNPWIMKSLKKLGVGADCSS 78 Query: 60 LYEVMLG-HEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 + E++L GE ++ D E I + +S L+ + + K+ Sbjct: 79 MAELILAETVGITGEEIVFSSNDTPDEEFLKAHELGAIINLDDISNLDDMERL-HLVPKR 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFHNNCENKSFL 173 I R NP ++ ++ G + + ++ K + + H + Sbjct: 138 ICFRYNPGPDLARGNAIIGTPQEAKYGMTREQLLKCVAWAKNKGIGYIGIHTMVISAELE 197 Query: 174 ------CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--------- 218 S M + + +I GGGI + + L Sbjct: 198 LPGLLGTISMMFDLANEIRNTHGVTVSFIDFGGGIGIPYRPEQEPVDLEGLGEGAKKLFE 257 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 ++ + +I E G I L T + ++ + VD+ + + + Sbjct: 258 EKMRGFENTRICFECGRMITGPYGYLVTKAIHYKNIYRDYIGVDACMADLMRPGIYGAYH 317 Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 G V G C D F +++GD I D + + + Sbjct: 318 HVSVLGKGNLPKNKIYDVVGSLCENSDKFAIQRELPEIEMGDLIIIHDTGAHGHSMGYNY 377 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + + DGT++ IR + +D + L Sbjct: 378 NGRLRHQEIMVHEDGTVQQIRRNETLHDLFATL 410 >gi|315931022|gb|EFV09997.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 327] Length = 336 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 120/334 (35%), Positives = 187/334 (55%), Gaps = 18/334 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP Y++++ KL N + + + +G K+LLALK FA G + +Y+ G T S L+ Sbjct: 6 IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E E E H Y+ A+K+ EI + S I+FN+++Q +KF+ K +GLR Sbjct: 66 EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSK--TQKNSLGLR 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N S + L +P +SRLG + KD ++ + GL FH CE +S A+LK Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKV 182 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +++FG +I Q++W++ GGG H T K Y V+ K FS+KY VQ+YLEPGEA+ T Sbjct: 183 FKEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286 L +V+DI EN K + I+D+S EAH+PD ++ ++ + Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + ++ G +CLAGD+ GE+ F+K +KIGD++ F Sbjct: 303 EFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKMFF 336 >gi|300933604|ref|ZP_07148860.1| hypothetical protein CresD4_05997 [Corynebacterium resistens DSM 45100] Length = 473 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 55/412 (13%), Positives = 117/412 (28%), Gaps = 51/412 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++I++ G ++ A K F + + + +S E Sbjct: 57 GTPAFVINEDDFRARCRALANAFGG-GERVHYASKAFLTKTIARWVAEEGLALDIASHGE 115 Query: 63 VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118 + + F + + K D AV S + I+ ++ ++ + + +L + Sbjct: 116 LQVALAADFPADRITIHGNNKSLDFLQFAVESGVELIVIDSEQEIARLSEVCGQLGQTQD 175 Query: 119 -GLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 +R+ P V + + G + + GL H + Sbjct: 176 VLIRVTPGVHVDTHEFIATSHEDQKFGFSLSSGTAYRAAVAAATARGLRLRGLHCHVGSQ 235 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQI--------------EWISLGGGIHFTDKDYPVKDF 214 F+ + + + + + + LGGG Sbjct: 236 VFEASGFALAAERLLGLWAKLLNDLPDLEGFDDTSLANFNVLDLGGGYGIAYMPDQEALD 295 Query: 215 CQRLKEFSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDIS------ENIKN 257 + ++ + +EPG AI +T V + + Sbjct: 296 VDEVASDLKEKVAKAAKTAGVPKPVLNVEPGRAIAGPSTVTLYRVGTVKDVDVSEHATRR 355 Query: 258 LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-V 312 + VD + ++ L E A + G C +GDI V Sbjct: 356 YLSVDGGMSDNIRPALYEAEYDCRVANREVQGEMIPTRIVGSHCESGDILVNDALVPDDV 415 Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + GD + Y + + +N + P + V + +R + D Sbjct: 416 QAGDLVMLGATGAYCFSMASRYNMMTRPPVIVVSEGQHRVMVRRETIEDVLA 467 >gi|209526840|ref|ZP_03275360.1| diaminopimelate decarboxylase [Arthrospira maxima CS-328] gi|209492711|gb|EDZ93046.1| diaminopimelate decarboxylase [Arthrospira maxima CS-328] Length = 463 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 51/399 (12%), Positives = 111/399 (27%), Gaps = 37/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L +L A K + + + GT S Sbjct: 53 GSPLYILDEVTLRTACRQYREAWAKYYPGESLILYASKAWNCLAICAIVASEGLGTDVVS 112 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117 E+ + + K + + ++ + L + A ++ + Sbjct: 113 GGELYTAKTAGVSPDKIYLHGNNKSRSELELAISTGCTVVADNWLDLTNLVELADEMSVQ 172 Query: 118 IGLRIN----PSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNN 166 +R+ P + S+ G E G+ H Sbjct: 173 SPVRVMIRFTPGIECHTHEYIRTGHLDSKFGFDPNQLDEVFKFVSSNPSLCCEGIHAHIG 232 Query: 167 CENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----- 218 + +L + + + I +++GGG+ + + Sbjct: 233 SQIFELQPHQDLAGVLMDAVTKGSQYGLNITEVNVGGGLGIRYTEDDDPPSIESWVSAIA 292 Query: 219 ------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270 E + ++ EPG +I+ T+ E + + + Sbjct: 293 SSVVAACEQRQIPLPKLLCEPGRSIIGPAAITAYTIGSRKEIPDLRTYIAVDGGMSDNPR 352 Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAG 325 + N T V G+ C +GDI + + GD + Sbjct: 353 PITYQSVYRVVIANRMSAPLTETITVAGKHCESGDILIQQAHLPGDCQTGDILVVMATGA 412 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 YN + + +N + P + N + I+ +Y+D Sbjct: 413 YNYSMASNYNRLPRPAAVLVNDSLSSIIIQRETYSDLIR 451 >gi|322377602|ref|ZP_08052092.1| protein TabA [Streptococcus sp. M334] gi|321281367|gb|EFX58377.1| protein TabA [Streptococcus sp. M334] Length = 416 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G ++ D E TI + + + A Sbjct: 79 ELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPETISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 LTPADLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HITNVTHPDGPSEVVDVVGSLCENNDKFAVNRELTHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|300790779|ref|YP_003771070.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] gi|299800293|gb|ADJ50668.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] Length = 447 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 119/398 (29%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YLID+Q++ + V++ A K + + + + S E Sbjct: 50 GTPSYLIDEQQVRDTAREYREAL--PDVEVAYASKALCTRAVLRWVAEEGLSLDTCSAGE 107 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F E + + A+ I+ +++ ++ + A + + Sbjct: 108 IAVARSVGFPAERMLLHGNAKTPEDLKAALGYGVRRIVVDSLDEIEQLGALAHGAQQVM- 166 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------------KIESEIKNVNGLMFHNNC 167 +R+ P V+ + G D + GL H Sbjct: 167 IRVTPGVAAGAHAAISTGTEGQKFGFSLLDGVPDNVDAAVEAVKRQPGLRLRGLHCHIGS 226 Query: 168 ENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLK 219 + + A + + + + + LGGG + + + +RL+ Sbjct: 227 QVSRVDRYEAAARRMAEVLVRIRDTHGVTLRELDLGGGHAVPYVGGEPAFDLGGYSRRLR 286 Query: 220 EFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272 ++ +EPG AIV V + + V VD + + Sbjct: 287 VALAYECAAHRFPLPRLTIEPGRAIVGPAGITVYRVCAVKRGSRTFVAVDGGMSDNARPS 346 Query: 273 LLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYN 327 L T V GR C AGD+ + + GD ++ Y+ Sbjct: 347 LYGARYTTRLVGRRSTAKRLPMTVVGRHCEAGDVLADGISLPADLHAGDLLAVPCTGAYH 406 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + +R + D Sbjct: 407 HSLASNYNQVGRPPLIGVRGGVATLLVRRETEEDLGRR 444 >gi|238792795|ref|ZP_04636426.1| Diaminopimelate decarboxylase [Yersinia intermedia ATCC 29909] gi|238727903|gb|EEQ19426.1| Diaminopimelate decarboxylase [Yersinia intermedia ATCC 29909] Length = 420 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 117/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + ++ + A K + + + + S SL E+ Sbjct: 27 PVWAYDGEIIAQRINQLRNFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LG-HEKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 H F + D ++ + + ++ L++ A + Sbjct: 82 RAIHAGFQPGQEPAEIVFTADLLDQATLLRVTELNIPVNAGSIDMLDQLGQHA--PGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G +D ++ + G+ H + Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWHQDLPQAIEKVKKYGLTLVGVHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + ++ I IS GGG+ + + + K Sbjct: 199 QHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNKAREQIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V + +EPG +V + L V + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLVAQVRAVKDMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 282 YPNTGPYT--------AMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E KIGD + F D Y Sbjct: 319 LLPADGRDLTSAPLIDTVVGGPLCESGDVFTQEAGGGLETRALPAAKIGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416 >gi|306824471|ref|ZP_07457817.1| diaminopimelate decarboxylase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433258|gb|EFM36228.1| diaminopimelate decarboxylase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 420 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 58/392 (14%), Positives = 113/392 (28%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 21 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILKEEGCGVDCSSYV 80 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ ++ F G ++ D E TI + + + A Sbjct: 81 ELLMSYKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 141 RYNPGGVFELGTDIMDNPG-EAKFGMTKNQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 200 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAMIGEGVRKVYEEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 260 LTPADLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRAYLGVDASAVNLMRPAMYGAYH 319 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 V G C D F +IGD + D + + +N Sbjct: 320 HITNLTHPDGPIEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 379 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 380 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 411 >gi|269957250|ref|YP_003327039.1| diaminopimelate decarboxylase [Xylanimonas cellulosilytica DSM 15894] gi|269305931|gb|ACZ31481.1| diaminopimelate decarboxylase [Xylanimonas cellulosilytica DSM 15894] Length = 463 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 61/418 (14%), Positives = 127/418 (30%), Gaps = 56/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++D+ + A GV + A K + + Sbjct: 42 GTPAYVLDEGEFRLRARRFADAFGQAFEQVGTGVDVYYAGKALLTKAVARWAREEGLRVD 101 Query: 57 SSSLYEVMLGHEKF--GGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQK 113 ++S E+ + G E + D E++A + II +++ ++++ D AQ Sbjct: 102 TASGGELAVALAAGVPGAELGLHGNNKSDGELEAALDAGVGRIIVDSLGEIDRLADLAQA 161 Query: 114 --LHKKIGLRINPSVSYSKFILADPNRPFSRLG---------------EKCKDKIESEIK 156 + + LR+ V + G +E Sbjct: 162 RGVVAPVMLRVTTGVHAGGHEFIATAHEDQKFGLSVSAGPGGGDSPAVIALLRVLERPSL 221 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPV- 211 + G+ H + F+ + + + H + ++ + LGGG Sbjct: 222 RLLGIHSHIGSQILDADGFAEAARTVLRLRAHLGIRTGVLVDEVDLGGGYGIAYLPQDSE 281 Query: 212 -------KDFCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKN---- 257 + + + + + +I +EPG AIV TV + + Sbjct: 282 LDPFRVAHEIARAVADACRELGTPLPRISIEPGRAIVGPAGITVYTVGTVKPVVVTSDDG 341 Query: 258 ------LVIVDSSVEAHVPDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFH 307 V VD + ++ L + V G+ C +GDI + Sbjct: 342 GTFTRLYVSVDGGMSDNIRPALYGAAYHAEIANRRSDAPLALVRVVGKHCESGDIVVDEL 401 Query: 308 FEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 V+ GD ++ Y + + +N + P + + +R + +D Sbjct: 402 LLPGDVRPGDLLAVAATGAYGRSMASNYNLLTRPPVIGVLDGASRVLVRRETVDDLLA 459 >gi|331004659|ref|ZP_08328121.1| hypothetical protein HMPREF0491_02983 [Lachnospiraceae oral taxon 107 str. F0167] gi|330409586|gb|EGG89026.1| hypothetical protein HMPREF0491_02983 [Lachnospiraceae oral taxon 107 str. F0167] Length = 423 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 117/391 (29%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N N G K A+K + + LN+ G SS+ Sbjct: 20 PTPWHIYDEKGIRENAKKLREAFSWNKGFKEYFAVKATPNPFIMNILNECGCGMDCSSMT 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ L F G+ ++ E I + ++ + + L + + Sbjct: 80 ELELADACGFMGKDIMFSSNETPIEEFKFANDLGAIINLDDITHIEYVEKVCGGLPETMS 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169 R NP ++ N ++ G IE+ + K V H Sbjct: 140 ARYNPGGVFTMSNGIMDNPGDAKYGMTPDQIIEAFNIMKSKGVKNFGIHAFLASNTVTNE 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224 + + + + +I+L GG+ + + + +K Sbjct: 200 YYPKLARELFEFAVRIKNECGICVSFINLSGGVGIPYTPDEEPNDIFEIGKGVKKAYDEV 259 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 V I+ E G ++ L T + K + VD+ + + Sbjct: 260 LTANDINDVSIFSELGRYMLGPYGALVTKAVHEKHTYKEYIGVDACATNLMRPAMYGAYH 319 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F + GD I D + + Sbjct: 320 HLSVLGKEDEKDDYVYDVVGALCENNDKFAIDRKLPKIDKGDYIYIHDTGAHGFAMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG +K IR + DY+ Sbjct: 380 NGKLKSAELLLQEDGNVKLIRRAETSKDYFA 410 >gi|261415933|ref|YP_003249616.1| diaminopimelate decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372389|gb|ACX75134.1| diaminopimelate decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326360|gb|ADL25561.1| diaminopimelate decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 419 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 57/404 (14%), Positives = 118/404 (29%), Gaps = 49/404 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D+ + + + + A K + + + + S E Sbjct: 18 GTPLWIYDRATIERAVKDVQ-VFD----TVRFAQKACPNLSVVSLIRKLGCVVDAVSAGE 72 Query: 63 VMLGH-EKFGG-------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK- 113 ++ F G Y D + ++ D V + + A Sbjct: 73 IVRALKAGFKGGQQKGKVPEIVYTADIFDRDALELVKKYDI--AVNVGSPDMIQQLADFG 130 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNC 167 + ++ +R+NP + + S+ G + +S + GL H Sbjct: 131 VKSELTIRVNPGFGHGHSRKTNTGGDLSKHGIWHEQIKDCIKLAQSNGMWITGLHMHIGS 190 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------DYPVKDFC 215 F + + + H + + IS GGG+ Y + D Sbjct: 191 GTD-FEHLAQVCDAMVDASRHLGSHLRTISAGGGLPIPYHEEEKGNRIDVKAYYDLWDNA 249 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274 ++ + S + V + +EPG +V + L + + + NL + D+ V Sbjct: 250 RKRIQQSIGHDVHLEVEPGRYLVAESGYLVAEIRAVKKQGSNLFYLLDAGFTDLVRPSFY 309 Query: 275 YQESATI------YPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFE 321 A A+V G C +GD+F + ++GD + Sbjct: 310 GSYHAISVVARDGRELNETVDAVVAGPLCESGDVFTQEEGGFVVTRKLPKAQVGDLLILH 369 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 D Y + +N + ++ N Sbjct: 370 DAGAYGAAMSSNYNSRRYAAETMYTKGEIKLVRERQTFEQLLQN 413 >gi|206575861|ref|YP_002236734.1| diaminopimelate decarboxylase [Klebsiella pneumoniae 342] gi|288933701|ref|YP_003437760.1| diaminopimelate decarboxylase [Klebsiella variicola At-22] gi|290511219|ref|ZP_06550588.1| diaminopimelate decarboxylase [Klebsiella sp. 1_1_55] gi|206564919|gb|ACI06695.1| diaminopimelate decarboxylase [Klebsiella pneumoniae 342] gi|288888430|gb|ADC56748.1| diaminopimelate decarboxylase [Klebsiella variicola At-22] gi|289776212|gb|EFD84211.1| diaminopimelate decarboxylase [Klebsiella sp. 1_1_55] Length = 420 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 117/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAQLSQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 E + D + + ++ L++ + + ++ Sbjct: 82 RALAAGYDPQQNPEDIVFTADLIDDATLDRVKALQIPVNAGSIDMLSQLGEVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G + + + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLPAALEVMRRYQLQLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222 + + ++ F ++ IS GGG+ Y + + + Sbjct: 199 GHLEQVCGAMVRQVVDFGQDLQAISAGGGLSIPYREGEEAIDTAHYYGLWNRAREQIAAH 258 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V++ +EPG +V + L + V + ++ V++D+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAESGVLVSQVRSVKEMGSRHFVLIDAGFNDLMRPAMYGSYHHIT 318 Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRDLSAAPQVETVVAGPLCESGDVFTQQEGGKVETRLLPAVVPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDGGKARLIRRRQTIQELLA 416 >gi|184200609|ref|YP_001854816.1| diaminopimelate decarboxylase [Kocuria rhizophila DC2201] gi|183580839|dbj|BAG29310.1| diaminopimelate decarboxylase [Kocuria rhizophila DC2201] Length = 483 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 59/417 (14%), Positives = 118/417 (28%), Gaps = 54/417 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 +P Y++ ++ + A V + A K + G Sbjct: 57 GSPAYVVSERTFRSRARRVREAFDAALEPLGVQVAVYYASKALLCTSVARWAVAEGLGID 116 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 ++S E+ + GE A + K + A+ + I+ +++ ++ A++ Sbjct: 117 TASGGELAVALAAGVPGERIALHGNNKSAEELSAALDAGVGRIVVDSLPEVELLATLARQ 176 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEK----------------CKDKIESEI 155 + LR+ P V S + G + + Sbjct: 177 RGTRAPVMLRVTPGVHASTHEFIATAHEDQKFGLSLHAAADGEDSPALQAVAACLAQDDA 236 Query: 156 KNVNGLMFHNNCENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 + GL H + + F+ + E G + + I LGGG Sbjct: 237 LELRGLHCHIGSQIFAAEGFAQAAERVLALRETVAGRWGLALPEIDLGGGHGVAYTAADS 296 Query: 212 KDFCQRLKEFSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260 + + + EPG I + TV + + + Sbjct: 297 AREITDIAGDLASLLAKALETSQLPAPHLSFEPGRYIAGPSGCTVYTVGTVKTVTVSPGV 356 Query: 261 VDSS------VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK 310 + + L + A P + V G+ C +GD+ + + Sbjct: 357 QRRYVSVDGGMSDNARPVLYDADYTAVLANRVSPEAPVLSRVVGKHCESGDVVVKDVYLP 416 Query: 311 -PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT-IKAIREFSYNDYYNN 365 V GD + Y + + +N + P I DG + +R S D Sbjct: 417 GDVHRGDLLVVPVTGAYCWSLSSNYNWLPRPGIVAVGEDGVPREIVRRESMADLLAR 473 >gi|15827559|ref|NP_301822.1| diaminopimelate decarboxylase [Mycobacterium leprae TN] gi|221230036|ref|YP_002503452.1| diaminopimelate decarboxylase [Mycobacterium leprae Br4923] gi|13626268|sp|Q50140|DCDA_MYCLE RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|13093109|emb|CAC31509.1| diaminopimelate decarboxylase [Mycobacterium leprae] gi|219933143|emb|CAR71223.1| diaminopimelate decarboxylase [Mycobacterium leprae Br4923] Length = 472 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 55/406 (13%), Positives = 119/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ G + A K F + +++ S E Sbjct: 64 GTPLFVIDEDDFRFRCREIAAAFGG-GENVHYAAKAFLCTEIARWIDEEGLSLDVCSGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + + K AV + I+ ++ +++ + A + + Sbjct: 123 LAVALHASFPPERISLHGNNKSVAELKDAVKAGVGYIVLDSTTEIERLDAIAGEAGIVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ + GL H + Sbjct: 183 VLVRLTVGVEAHTHEFIATAHEDQKFGLSVASGAAMAAVRRVFATDNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLKNIEKEFGHFI--------TQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + Q+ + LGGG+ + L Sbjct: 243 IFDVAGFELAAHRVIGLLCDIVGEFDPEKTAQLSIVDLGGGLGISYLPDDDPPPIFELAA 302 Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 ++ +EPG AI T V I + + V +D Sbjct: 303 KLGAIVSNESAAVGLPVPKLMVEPGRAIAGPGTITLYEVGTIKDVDVSATAHRRYVSIDG 362 Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L + + + A + G+ C +GDI + +K GD + Sbjct: 363 GMSDNIRTALYDAQYDVRLVSRTSDAPAAPASIVGKHCESGDIVVRDTWVPDDLKPGDLV 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + P + +R + +D + Sbjct: 423 GVAATGAYCYSLSSRYNMLGRPAVVAVCAGQARLILRRETVDDLLS 468 >gi|7436508|pir||T09993 diaminopimelate decarboxylase (EC 4.1.1.20) - Mycobacterium leprae gi|699341|gb|AAA63102.1| lysA [Mycobacterium leprae] Length = 495 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 55/406 (13%), Positives = 119/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ G + A K F + +++ S E Sbjct: 87 GTPLFVIDEDDFRFRCREIAAAFGG-GENVHYAAKAFLCTEIARWIDEEGLSLDVCSGGE 145 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + + K AV + I+ ++ +++ + A + + Sbjct: 146 LAVALHASFPPERISLHGNNKSVAELKDAVKAGVGYIVLDSTTEIERLDAIAGEAGIVQD 205 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ + GL H + Sbjct: 206 VLVRLTVGVEAHTHEFIATAHEDQKFGLSVASGAAMAAVRRVFATDNLRLVGLHSHIGSQ 265 Query: 169 NKSFLCFSAMLKNIEKEFGHFI--------TQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + + Q+ + LGGG+ + L Sbjct: 266 IFDVAGFELAAHRVIGLLCDIVGEFDPEKTAQLSIVDLGGGLGISYLPDDDPPPIFELAA 325 Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263 ++ +EPG AI T V I + + V +D Sbjct: 326 KLGAIVSNESAAVGLPVPKLMVEPGRAIAGPGTITLYEVGTIKDVDVSATAHRRYVSIDG 385 Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L + + + A + G+ C +GDI + +K GD + Sbjct: 386 GMSDNIRTALYDAQYDVRLVSRTSDAPAAPASIVGKHCESGDIVVRDTWVPDDLKPGDLV 445 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + P + +R + +D + Sbjct: 446 GVAATGAYCYSLSSRYNMLGRPAVVAVCAGQARLILRRETVDDLLS 491 >gi|308177031|ref|YP_003916437.1| diaminopimelate decarboxylase [Arthrobacter arilaitensis Re117] gi|307744494|emb|CBT75466.1| diaminopimelate decarboxylase [Arthrobacter arilaitensis Re117] Length = 473 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 63/418 (15%), Positives = 125/418 (29%), Gaps = 55/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP +++D+ A GV + A K F + + Sbjct: 52 GTPLFVLDENDFRARAAGFKTAFDEAFKDLCGGVDVYYAGKAFLCTEVARWVTAEGLRLD 111 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E+ + K + + K A+ ++ +++ +L + A Sbjct: 112 TCSGGELAVASAAKVPAANLSLHGNNKSAAEITRAIEMGVGRLVIDSLDELERVISIADA 171 Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------------KIESEIKN 157 + + ++ LRI P V S + G + + ++ N Sbjct: 172 MGQTAQVMLRITPGVHASTHEAIATAHEDQKFGLSILEDGTGSSPALRAVAGALAAKNIN 231 Query: 158 VNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK- 212 + GL H + F+ ML + K Q+ + LGGG Sbjct: 232 LLGLHAHIGSQIFEAEGFAMVARTMLGLLHKIREIHGVQLPELDLGGGYGIAYTSEDQPS 291 Query: 213 -------DFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE--------- 253 Q + E ++ +I +EPG AI +T + Sbjct: 292 TPAKLAGQMAQVVSETCKELELECPRISIEPGRAIAGPSTFTLYEAGVRKDVQVEDASGT 351 Query: 254 -NIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHF 308 + + + VD + + L + A+ + V G+ C +GDI + + Sbjct: 352 LHPRRYISVDGGMSDNPRPVLYDAQYTAVLASRMTQNDAIISRVVGKHCESGDIVVKDVY 411 Query: 309 EKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 V GD ++ Y + +N + P + +R + D Sbjct: 412 LPEDVAAGDLLAVPATGAYCWALSSNYNYLTRPAVVAVRDGQARLIVRRETETDLLAR 469 >gi|327540951|gb|EGF27507.1| diaminopimelate decarboxylase [Rhodopirellula baltica WH47] Length = 427 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 56/389 (14%), Positives = 112/389 (28%), Gaps = 31/389 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+ L + + N G + A+K + + + G SS+ E Sbjct: 22 TPFVLYHEDGIRARARELTDAFAWNEGFQQYFAVKATPNPHIVAMMAEEGGGADCSSVAE 81 Query: 63 VMLG-HEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ G+ + E + I +T +++ + Sbjct: 82 LITCERLGITGQDVMFTSNNTTMEEFEIANKLGAIINLDTPHHVDQISQLSPLPEMVS-- 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL- 173 + + + ++ G + I+ + GL + Sbjct: 140 FRFNPGPERQGNVIIGDPKEAKFGSTREQLIDGYRRCAELGISRFGLHAMVVSNELNIEA 199 Query: 174 ---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--- 227 + + + +E I+LGGGI + + K Sbjct: 200 LLQTAEMLFELAAEIHRETGISVECINLGGGIGVPYQPGQEPVDLPAFGDGVRKLYESIL 259 Query: 228 --------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 +I +E G A+ L T V++ + K+ V VD+ + + + Sbjct: 260 VPAGIAPVRILMENGRAMTGPFGYLITKVINQKSSYKDYVGVDACMSNLMRPGMYGAYHH 319 Query: 280 TIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 T + G C D F ++GD D + + +N Sbjct: 320 ITVMGKEDQPADRTVDIVGSLCENNDKFAIDRKMPATEVGDIAVIHDAGAHGHSMGFQYN 379 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYY 363 G V N G +AIR ++ DY+ Sbjct: 380 GRLRSAEIVFNDAGEFRAIRRAETFEDYF 408 >gi|238783697|ref|ZP_04627717.1| Diaminopimelate decarboxylase [Yersinia bercovieri ATCC 43970] gi|238715410|gb|EEQ07402.1| Diaminopimelate decarboxylase [Yersinia bercovieri ATCC 43970] Length = 420 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 52/398 (13%), Positives = 115/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + ++ + + A K + + + + S SL E+ Sbjct: 27 PVWAYDGDIITQRINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 F + D ++ + ++ L++ +A + Sbjct: 82 RALIAGFQPGQEPAEIVFTADLLDQATLLRVTELAIPVNAGSIDMLDQLGQQA--PGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G +D ++ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYQDLPQAIEKIAQYGLTLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + ++ I IS GGG+ + + + Sbjct: 199 QHLEQVCDAMVEQVVTLGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNSARERIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V + +EPG +V + L V + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLIAQVRAVKEMGSRHYVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 282 YPN--------TGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E +IGD + F D Y Sbjct: 319 LLPADGRSLSAEPLIETVVGGPLCESGDVFTQEAGGGLETRPLPAARIGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416 >gi|239917326|ref|YP_002956884.1| diaminopimelate decarboxylase [Micrococcus luteus NCTC 2665] gi|239838533|gb|ACS30330.1| diaminopimelate decarboxylase [Micrococcus luteus NCTC 2665] Length = 490 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 59/425 (13%), Positives = 112/425 (26%), Gaps = 62/425 (14%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP ++D+ A G + A K + Sbjct: 58 GTPLLVVDEDDFRARARAFREGFDAAFADLCGGADVYYAGKSMLTLSTARWAAEEGLRVD 117 Query: 57 SSSLYEVMLGHEK--FGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQK 113 ++S E+ + + + D E+ A+ + II +++ +L A + Sbjct: 118 TASGGELAIALAAGVYPAHIGLHGNNKSDAELRTALEAGVGRIIVDSLDELTHLAALAAE 177 Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG----------- 160 + LR+ P V + G NV G Sbjct: 178 AGHRAPVMLRLTPGVHAHTHDFIATAHEDQKFGLSLAPASTDRDGNVAGRSPAAVAVDTA 237 Query: 161 ----------LMFHNNCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTD 206 + H + F +L+ + + ++ + LGGG Sbjct: 238 LATESIDLLGVHCHIGSQIFEAEGFGLAAGRVLEFLAEVKAEHGVELAELDLGGGHGIAY 297 Query: 207 KDYPVKDFCQRLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + + ++ LEPG AI TV Sbjct: 298 TAVDEPRPAAEIADALADDVQKTVERLGLRCPRVSLEPGRAISGPAGLTLYTVGVTKTVD 357 Query: 256 ----------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGD 301 + V VD + + L + A P + V G+ C +GD Sbjct: 358 ADAPDGGTAARRYVAVDGGMSDNPRPVLYDADYTAVSARRTSEAEPALSRVVGKHCESGD 417 Query: 302 IFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 I + + GD ++ Y + +N + P + + IR + Sbjct: 418 ILVRDVYLPADLGRGDLLAVPATGAYTHVMSSNYNALARPAVVAVSGGLARVIIRRETQE 477 Query: 361 DYYNN 365 D + Sbjct: 478 DLFAR 482 >gi|305682083|ref|ZP_07404887.1| diaminopimelate decarboxylase [Corynebacterium matruchotii ATCC 14266] gi|305658556|gb|EFM48059.1| diaminopimelate decarboxylase [Corynebacterium matruchotii ATCC 14266] Length = 452 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 62/406 (15%), Positives = 117/406 (28%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D+ + + A K F + +N+ +S E Sbjct: 45 GTPVMVVDEIDFRSRCRDMARAFGGPEH-VHYASKAFMTSRIVQWVNEEGLSLDIASHGE 103 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118 +++ F E A + KD +I ++ ++ A +L + Sbjct: 104 LLVALHAGFPAERIAAHGNNKDAAFLRDCVSKGVGFVILDSHQEIEDLNTIAAELGQTQD 163 Query: 119 -GLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168 +R+ P + + G + +E + GL H + Sbjct: 164 VLIRVKPGIDAHTHEFISTAHEDQKFGFSLASGSALKAARRVVELPNLRLIGLHCHVGSQ 223 Query: 169 NKSFLCFSAMLKNIEKEFG------HFITQIEWISLGGGIHFTDKD-----------YPV 211 FS + I K + + ++LGGG + + Sbjct: 224 VFDAEGFSLAAERILKLYRTIIEECEVGEEFNILNLGGGYGIAYVEGEQPLDVEAVSTDL 283 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN------TTVLDISENIKNLVIVDSSV 265 E I +EPG AI +T V + + VD + Sbjct: 284 LQRVNTYAERLHLTMPFIKVEPGRAIAGPSTVTVYTVGTVKDVTIDGGKTRRYISVDGGM 343 Query: 266 EAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISF 320 ++ L E N V G C +GDI ++ GD ++ Sbjct: 344 GDNIRPALYGAEYDIRLVNRSTDAPLIPTRVVGSHCESGDILINDRNLPEDIRPGDIVAL 403 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKN--VDGTIKAIREFSYNDYYN 364 Y + + +N + P I D +R + D++N Sbjct: 404 AATGAYCYSMSSRYNMMMRPAIVSVGAADDKAHLMVRRETLEDFFN 449 >gi|218130087|ref|ZP_03458891.1| hypothetical protein BACEGG_01674 [Bacteroides eggerthii DSM 20697] gi|317476580|ref|ZP_07935826.1| diaminopimelate decarboxylase [Bacteroides eggerthii 1_2_48FAA] gi|217987591|gb|EEC53919.1| hypothetical protein BACEGG_01674 [Bacteroides eggerthii DSM 20697] gi|316907256|gb|EFV28964.1| diaminopimelate decarboxylase [Bacteroides eggerthii 1_2_48FAA] Length = 386 Score = 189 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 126/365 (34%), Gaps = 26/365 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + + A+K A + + + G S Sbjct: 13 LRTPFYYYDTKVLRDTLTCIRTEASRYDNYSVHYAVKANANSKVLTIIRESGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116 E+ F + K + + D FN ++ +L + A+ K Sbjct: 73 GEIRAAIKAGFPANKIVFAGVGKADWEINLGLDYDIFCFNVESIPELEIINELAEAKGKI 132 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNNCE 168 + RINP+V ++ G +D E+KNV GL FH + Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMQDMDHVIDVAQEMKNVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLK 219 F+ + ++ +IE I++GGG+ K + + Sbjct: 193 ILDMGDFVALCNRVNELQDRLEARQIRIEHINVGGGLGIDYGHPNRQAIPDFKSYFETYD 252 Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277 + + ++ E G ++V +L + VL + + + D+ + + L Sbjct: 253 NCLKLRSYQTLHFELGRSVVGQCGSLISRVLYVKQGANKQFAILDAGMTDLIRPALYQAF 312 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + T V G C + D+FG+ VK GD ++ Y + +N Sbjct: 313 HKIENLTSDAPLQTYDVVGPICESSDVFGKAVDLNGVKRGDLMALRSAGAYGEIMASGYN 372 Query: 336 GINMP 340 +P Sbjct: 373 CRELP 377 >gi|330833331|ref|YP_004402156.1| putative diaminopimelate decarboxylase [Streptococcus suis ST3] gi|329307554|gb|AEB81970.1| putative diaminopimelate decarboxylase [Streptococcus suis ST3] Length = 415 Score = 189 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 118/388 (30%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G ++ Sbjct: 20 PTPFHLYDEKGIREKARALNAAFAWNKGFKEYFAVKATPTPAILKILQEEGCGVDCATDV 79 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV++ + + + + E TI + + K+ A + LR Sbjct: 80 EVLMSEKLGFKDIMFTSNDTQAQEFVYARKVGATINLDAYEHIEFLKNVAGIPET-VCLR 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN----KS 171 NP +S + S+ G + ++ G+ Sbjct: 139 YNPGGVFSLGTDIMDHPEESKFGMTKEQLMKGYKELKELGVKEFGIHAFLASNTVTNDYY 198 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------ 225 + + + + +++I L GGI + + + E K Sbjct: 199 PVLAHQLFELALEIREETDVTLDFIDLSGGIGVNYRPEQEPNDIAVIGEGVRKVYEEILT 258 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 ++I+ E G ++ L T VL E + + VD+S + Sbjct: 259 PAGMGHIKIFTELGRFMLAPHGHLITKVLHRKETYRTYIGVDASAANLMRPAFYGAYHHI 318 Query: 281 IYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 V G C D F ++GD + D + + +NG Sbjct: 319 TNITRPDAPIEVVDVAGSPCENNDKFAVNRELPRAEVGDTLVIHDSGAHGFSMGYNYNGR 378 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + + DGT + IR + DY+ Sbjct: 379 LRSSEILLQEDGTARMIRRAETPEDYFA 406 >gi|161506442|ref|YP_001573554.1| diaminopimelate decarboxylase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867789|gb|ABX24412.1| hypothetical protein SARI_04643 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 448 Score = 189 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 113/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + + A K + + + S SL E+ Sbjct: 55 PVWVYDARIIRRQITALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 109 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 110 RALAAGYDPQTRPDDIVFTADVIDAATLARVSELRIPVNAGSVDMLAQLGQVS--PGHRV 167 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 168 WLRLNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMRQYRLKLVGIHMHIGSGVDYG 227 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ + Y R + Sbjct: 228 HLKQVCGAMVRQVL-ECGQDLEAISAGGGLSIPYREGEESVDTRHYYGLWNAAREQIARH 286 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T + + + V+VD+ + + Sbjct: 287 LGHAVKLEIEPGRFLVAQSGVLVTQIRSVKQMGSRRFVLVDAGFNDLMRPAMYGSYHRIS 346 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 347 ALAADGRSLENGPKVETVVAGPLCESGDVFTQQEGGMVETRVLPAVTPGDYLVLHDTGAY 406 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 407 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 444 >gi|237712075|ref|ZP_04542556.1| diaminopimelate decarboxylase [Bacteroides sp. 9_1_42FAA] gi|229453396|gb|EEO59117.1| diaminopimelate decarboxylase [Bacteroides sp. 9_1_42FAA] Length = 386 Score = 189 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 63/366 (17%), Positives = 116/366 (31%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D L L K + A+K A + + + G S Sbjct: 13 LETPFYYYDVNVLRETLSCINKEAGKYNNFCVHYAVKANANHKVLTIIRESGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKK 117 E+ F Y K + + D FN +V +L + A K Sbjct: 73 GEIRAAIKAGFPTNKIVYAGVGKTDWEINLGLDYDIFCFNVESVPELEIINELASAKGKT 132 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 RINP+V ++ G +D GL FH + Sbjct: 133 ARVAFRINPNVGAHTHANITTGLAENKFGISMEDMDKVIDMAGTLPHVKFVGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F+ + ++++ +E I++GGG+ + + F+ + Sbjct: 193 ILDMGDFVALCNRVNELQEKLCARQIIVEHINVGGGLGIDYAHPNRQAIPNFTEYFATYH 252 Query: 226 SV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275 ++ E G A+V +L + V+ + + + D+ + + L Y Sbjct: 253 KHLKLRPQQTLHFELGRAVVGQCGSLISKVIYVKQGANKQFAILDAGMTDLIRPALYQAY 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + I T V G C + D+FG+ GD + Y + +N Sbjct: 313 HKIENITSEEPMETYDVVGPICESSDVFGKAIDLNKAHRGDLFALRSAGAYGEIMASAYN 372 Query: 336 GINMPT 341 +P Sbjct: 373 CRALPK 378 >gi|219681789|ref|YP_002468175.1| diaminopimelate decarboxylase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471491|ref|ZP_05635490.1| diaminopimelate decarboxylase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624632|gb|ACL30787.1| diaminopimelate decarboxylase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 415 Score = 189 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 60/394 (15%), Positives = 115/394 (29%), Gaps = 42/394 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D + ++ + A K + + + + SL E+ Sbjct: 27 PFWVYDADIIYKKINLLRKFDV-----IRFAQKSCSNINILRLMKNKNVKIDAVSLGEIE 81 Query: 65 LGH-EKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 F E + + V + ++ L + + + L Sbjct: 82 RALLSGFKPSTNEIIFTADILDEETLLKVEKYKIPVNAGSLDMLKQLGKIS--PGHHVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFLCFS 176 RINP Y + S+ G + I+ + GL H Sbjct: 140 RINPRFGYGHSKKTNTGGENSKHGIWHPEQAIPIIKKYKLKLIGLHMHIGSGVNYLHLKK 199 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE----------KYS 226 I+ F +I IS+GGG+ K ++ + Sbjct: 200 VSQAMIKYAF-QLNQKISSISVGGGLPIPYKFNDQPIDIKKYFMLWDIARKKISKFLGEK 258 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 +++ +EPG +V + L + V KN V+VD + + Sbjct: 259 IELEIEPGRFLVAESGILISKVWATKKMGNKNFVLVDVGFNDLMRPTMYGSYHHISVIYG 318 Query: 286 GPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNINR 330 V G C +GDIF + +K+GD + F D Y Sbjct: 319 DDRKMNEKETIDTVVAGPLCESGDIFTQKEGGTVQTRKLPTIKVGDYLIFHDTGAYGAAM 378 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + + + +I R + + N Sbjct: 379 SSNYNTRPLIPEILLKNNDSIVIRRRQTIEEILN 412 >gi|15903834|ref|NP_359384.1| diaminopimelate decarboxylase [Streptococcus pneumoniae R6] gi|116516303|ref|YP_817197.1| diaminopimelate decarboxylase [Streptococcus pneumoniae D39] gi|15459476|gb|AAL00595.1| Diaminopimelate decarboxylase [Streptococcus pneumoniae R6] gi|116076879|gb|ABJ54599.1| diaminopimelate decarboxylase [Streptococcus pneumoniae D39] Length = 416 Score = 189 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 112/392 (28%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + G E + D E TI + + + A Sbjct: 79 ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 V + D ++ G ++ + GL Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGLHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|149003637|ref|ZP_01828502.1| OxaA-like protein precursor [Streptococcus pneumoniae SP14-BS69] gi|168492047|ref|ZP_02716190.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC0288-04] gi|168494781|ref|ZP_02718924.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC3059-06] gi|221232702|ref|YP_002511856.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae ATCC 700669] gi|237650995|ref|ZP_04525247.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae CCRI 1974] gi|237822553|ref|ZP_04598398.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae CCRI 1974M2] gi|307128176|ref|YP_003880207.1| diaminopimelate decarboxylase [Streptococcus pneumoniae 670-6B] gi|147758369|gb|EDK65369.1| OxaA-like protein precursor [Streptococcus pneumoniae SP14-BS69] gi|183573698|gb|EDT94226.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC0288-04] gi|183575334|gb|EDT95862.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC3059-06] gi|220675164|emb|CAR69748.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae ATCC 700669] gi|306485238|gb|ADM92107.1| diaminopimelate decarboxylase [Streptococcus pneumoniae 670-6B] Length = 416 Score = 189 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + G E + D E TI + + + A Sbjct: 79 ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|148993161|ref|ZP_01822727.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP9-BS68] gi|168489983|ref|ZP_02714182.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP195] gi|147928135|gb|EDK79153.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP9-BS68] gi|183571632|gb|EDT92160.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP195] gi|332072059|gb|EGI82546.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA17570] Length = 416 Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 112/392 (28%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + G E + D E TI + + + A Sbjct: 79 ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169 V + D ++ G ++ + GL Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGLHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|242238205|ref|YP_002986386.1| diaminopimelate decarboxylase [Dickeya dadantii Ech703] gi|242130262|gb|ACS84564.1| diaminopimelate decarboxylase [Dickeya dadantii Ech703] Length = 420 Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 116/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D Q +++ ++ + A K + + + Q S SL E+ Sbjct: 27 PVWAYDAQTIIDRIEQLRQFD-----TIRFAQKACSNIHILRLMRQQGVKVDSVSLGEIE 81 Query: 65 LGHEKF------GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E + V + +V L++ A + Sbjct: 82 RALAAGFVPGSADHEIVFTADVLDRATLQRVHELHIPVNAGSVDMLSQLG--AASPGHAV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYADLPLALAEIQRYQLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK---- 224 + + + F + IS GGG+ + + + E+ Sbjct: 199 GHLEQVCDAMVNQVIAFGQDLTAISAGGGLSIPYHHDGERIDTRHYYGLWHQARERIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 ++V + +EPG +V L V + ++ V+VD+ + + Sbjct: 259 LGHAVTLEIEPGRFLVAEAGVLVAEVRAVKDMGSRHFVLVDAGFNDLMRPAMYGSYHHIT 318 Query: 282 Y--------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E ++GD + F D Y Sbjct: 319 LLAGDGRDLTTAARRDTVVAGPLCESGDVFTQQAGGGVETLALPDARVGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + ++ Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGKPRLIRRRQTLDELLA 416 >gi|163846166|ref|YP_001634210.1| diaminopimelate decarboxylase [Chloroflexus aurantiacus J-10-fl] gi|222523912|ref|YP_002568382.1| diaminopimelate decarboxylase [Chloroflexus sp. Y-400-fl] gi|163667455|gb|ABY33821.1| diaminopimelate decarboxylase [Chloroflexus aurantiacus J-10-fl] gi|222447791|gb|ACM52057.1| diaminopimelate decarboxylase [Chloroflexus sp. Y-400-fl] Length = 434 Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 63/397 (15%), Positives = 123/397 (30%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKL-LLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP YL+D L + G + A K + + Q G S Sbjct: 34 GTPLYLLDDLTLRGAMRAYRQAFATAYPGPSIVHYAGKALLNTALAQIVAQEGLGLDVVS 93 Query: 60 LYEVMLG-HEKFGGET-HAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+++ + H + A D E A+ I+ + + +L + L Sbjct: 94 ATELLVAQRAGLPMDRVHLHGNAKSDQELERAIAWRVGAIVVDNLDELQRLCALTSHLTT 153 Query: 117 KIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNC 167 G LR+ P++ ++ G + E+ + + GL H Sbjct: 154 PQGVLLRVAPAIEADTHAHIATGSATAKFGLPLEALDEAVAQTLAAPSLRWLGLHAHIGS 213 Query: 168 ENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-------- 215 + + +A ++ + F +S GGG+ Sbjct: 214 QLFALEQVTATVEVLVALAARIRDRFGVAPVELSPGGGLGVPYTADQPATDIGRYAQVVS 273 Query: 216 QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272 L E+Y ++ +EPG +IV V + ++ V +D + ++ Sbjct: 274 AALCAACERYRLPLPRLTVEPGRSIVARAGVALYRV--VGRKGEHWVHIDGGMADNIRPA 331 Query: 273 LLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 L + + N T V GR C +GD+ V+ D ++ Y + Sbjct: 332 LYGARYSAVLANKPASPPAMTVNVGGRYCESGDVLLRDIALPTVQPDDLLAVATAGAYTL 391 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + R + D Sbjct: 392 SMSSTYNLVPRPALVLVADGQARLIQRRETEADVLAR 428 >gi|225859733|ref|YP_002741243.1| diaminopimelate decarboxylase [Streptococcus pneumoniae 70585] gi|225721732|gb|ACO17586.1| diaminopimelate decarboxylase [Streptococcus pneumoniae 70585] Length = 416 Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + G E + D E TI + + + A Sbjct: 79 ELLMSHKLDFLGSEIMFSSNNTSDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|225022820|ref|ZP_03712012.1| hypothetical protein CORMATOL_02865 [Corynebacterium matruchotii ATCC 33806] gi|224944427|gb|EEG25636.1| hypothetical protein CORMATOL_02865 [Corynebacterium matruchotii ATCC 33806] Length = 452 Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 62/406 (15%), Positives = 118/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D+ + + A K F + +N+ +S E Sbjct: 45 GTPVMVVDEIDFRSRCRDMARAFGGPEH-VHYASKAFMTSRIVQWVNEEGLSLDIASHGE 103 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 +++ F E A + KD +I ++ ++ A +L + Sbjct: 104 LLVALHAGFPAERIAAHGNNKDAAFLRDCVSKGVGFVILDSHQEIEDLHAIATELGRTQD 163 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168 + +R+ P + + G + +E + GL H + Sbjct: 164 VLIRVKPGIDAHTHEFISTAHEDQKFGFSLASGSALKAARRVVELPNLRLIGLHCHVGSQ 223 Query: 169 NKSFLCFSAMLKNIEKEFG------HFITQIEWISLGGGIHFTDKD-----------YPV 211 FS + I K + + ++LGGG + + Sbjct: 224 VFDAEGFSLAAERILKLYRTIIEECEVGEEFNILNLGGGYGIAYVEGEQPLDVEAVSTDL 283 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN------TTVLDISENIKNLVIVDSSV 265 E I +EPG AI +T V + + VD + Sbjct: 284 LQRVNTYAERLHLTMPFIKVEPGRAIAGPSTVTVYTVGTVKDVTIDGGKTRRYISVDGGM 343 Query: 266 EAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISF 320 ++ L E N V G C +GDI ++ GD ++ Sbjct: 344 GDNIRPALYGAEYDIRLVNRSTDAPLIPTRVVGSHCESGDILINDRNLPEDIRPGDIVAL 403 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKN--VDGTIKAIREFSYNDYYN 364 Y + + +N + P I D +R + D++N Sbjct: 404 AATGAYCYSMSSRYNMMMRPAIVSVGAADDKAHLMVRRETLEDFFN 449 >gi|15617037|ref|NP_240250.1| diaminopimelate decarboxylase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219682344|ref|YP_002468728.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|11386744|sp|P57513|DCDA_BUCAI RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|25290916|pir||H84980 diaminopimelate decarboxylase (EC 4.1.1.20) [imported] - Buchnera sp. (strain APS) gi|10039102|dbj|BAB13136.1| diaminopimelate decarboxylase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622077|gb|ACL30233.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086169|gb|ADP66251.1| diaminopimelate decarboxylase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086741|gb|ADP66822.1| diaminopimelate decarboxylase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 415 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 60/394 (15%), Positives = 115/394 (29%), Gaps = 42/394 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D + ++ + A K + + + + SL E+ Sbjct: 27 PFWVYDADIIYKKINLLRKFDV-----IRFAQKSCSNINILRLMKNKNVKIDAVSLGEIE 81 Query: 65 LGH-EKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 F E + + V + ++ L + + + L Sbjct: 82 RALLSGFKPSTNEIIFTADILDEETLLKVAKYKIPVNAGSLDMLKQLGKIS--PGHHVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFLCFS 176 RINP Y + S+ G + I+ + GL H Sbjct: 140 RINPRFGYGHSKKTNTGGENSKHGIWHPEQAIPIIKKYKLKLIGLHMHIGSGVNYLHLKK 199 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE----------KYS 226 I+ F +I IS+GGG+ K ++ + Sbjct: 200 VSQAMIKYAF-QLNQKISSISVGGGLPIPYKFNDQPIDIKKYFMLWDIARKKISKFLGEK 258 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 +++ +EPG +V + L + V KN V+VD + + Sbjct: 259 IELEIEPGRFLVAESGILISKVWATKKMGNKNFVLVDVGFNDLMRPTMYGSYHHISVIYG 318 Query: 286 GPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNINR 330 V G C +GDIF + +K+GD + F D Y Sbjct: 319 DDRKMNEKETIDTVVAGPLCESGDIFTQKEGGTVQTRKLPTIKVGDYLIFHDTGAYGAAM 378 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + + + +I R + + N Sbjct: 379 SSNYNTRPLIPEILLKNNDSIVIRRRQTIEEILN 412 >gi|123443530|ref|YP_001007503.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090491|emb|CAL13360.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 420 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 116/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + ++ + + A K + + +++ S SL E+ Sbjct: 27 PVWAYDGEIITQKINQLRHFDV-----IRFAQKACSNIHILRLMHEQGVKVDSVSLGEIE 81 Query: 65 LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D ++ + ++ L++ A + Sbjct: 82 RALQAGFQPGQEPAEIVFTADLLDQATLLRVTELSIPVNAGSIDMLDQLGQHA--SGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G +D I+ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIAKIQQYGLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + ++ I IS GGG+ + + + Sbjct: 199 QHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNSARERIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V + +EPG +V L V + + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLVAEAGVLIAQVRAVKNMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E IGD + F D Y Sbjct: 319 VLPANGRSLANEPLIDTVVAGPLCESGDVFTQEAGGGLETRKLPAANIGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEEIIA 416 >gi|257867192|ref|ZP_05646845.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC30] gi|257873527|ref|ZP_05653180.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC10] gi|257801248|gb|EEV30178.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC30] gi|257807691|gb|EEV36513.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC10] Length = 438 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 66/400 (16%), Positives = 123/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ ++ + + + A K F M + S Sbjct: 25 GTPLYVYSVSEIREECQKIQAQFLTRYSKTRAAYAAKAFCTTAMLQVIKSEGLSLDVVSG 84 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F E +N K + A+ II + + ++ + Q+ Sbjct: 85 GELYTAIQADFPAEHIEFNGNNKSIEELAAALDYGVGRIIVDGIQEVGLIRALCQEKQVV 144 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 KI LRI P VS S + S+ G ++ I++ + GL FH Sbjct: 145 AKILLRITPEVSVSTHQFISTGQKDSKFGIPLDEEILFPLVEEVIQAPELDFYGLHFHVG 204 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGI-----------HFTDKDYPV 211 + A + + ++ ++GGG ++ PV Sbjct: 205 SQLSDNRSHLAAVDAALALVQTIHERFDYWIKELNVGGGFGVRYTDADIRQPYSYFLDPV 264 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + + I +EPG +IV T+ I +D + ++ Sbjct: 265 MEKIDAFYAQHQSERPTIVIEPGRSIVAEAGISLHTIGSIKTLPGIRTYASIDGGMTDNI 324 Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L I N + G++C + DI + PV+ GD + Sbjct: 325 RPGLYQATYTGILANRASEAATQKVTISGKACESTDILVKDLALPPVETGDLFATFATGA 384 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + +P + A++ SY N Sbjct: 385 YGYSMASSYNNLQIPAVVFVENGQAELAVKRQSYEQMLQN 424 >gi|318606976|emb|CBY28474.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp. palearctica Y11] Length = 420 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 116/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + ++ + + A K + + +++ S SL E+ Sbjct: 27 PVWAYDGEIITQKINQLRHFDV-----IRFAQKACSNIHILRLMHEQGVKVDSVSLGEIE 81 Query: 65 LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D ++ + ++ L++ A + Sbjct: 82 RALQAGFQPGQEPAEIVFTADLLDQATLLRVTELSIPVNAGSIDMLDQLGLHA--SGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G +D I+ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIAKIQQYGLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + ++ I IS GGG+ + + + Sbjct: 199 QHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNSARERIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V + +EPG +V L V + + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLVAEAGVLIAQVRAVKNMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E IGD + F D Y Sbjct: 319 VLPADGRSLANEPLIDTVVAGPLCESGDVFTQEAGGGLETRKLPAANIGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416 >gi|315443350|ref|YP_004076229.1| diaminopimelate decarboxylase [Mycobacterium sp. Spyr1] gi|315261653|gb|ADT98394.1| diaminopimelate decarboxylase [Mycobacterium sp. Spyr1] Length = 472 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 54/406 (13%), Positives = 117/406 (28%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + G + A K F + +++ ++ E Sbjct: 64 GTPVFVIDEADFRSRCRDISSAFGG-GEYVHYAAKAFLCGEIARWVDEEGLSLDVATGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + F + K AV ++ +++ ++ + A + + Sbjct: 123 LAIALHAGFPAGRITVHGNNKSVAELTAAVKHGVGHVVVDSIIEIERLDRIAADNGVVQD 182 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + E+ + GL H + Sbjct: 183 VLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMEAVRRVFEAGNLRLVGLHSHIGSQ 242 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + F + ++ + LGGG+ + L Sbjct: 243 IFDVAGFEIAAHRVIGLLRDVVAEFGVEKTSQMDIVDLGGGLGISYLPDDNPPPMSELAA 302 Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + ++ +EPG AI T V + + + Sbjct: 303 KLKAIVARESAAVGLPAPKLVVEPGRAIAGPGTITLYEVGTVKDVAVSPTSHRRYVSVDG 362 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318 + ++ L E + + P + V G+ C +GDI + V GD + Sbjct: 363 GMSDNIRTSLYGAEYDVRLLSRVSDATPTLSRVVGKHCESGDIVVRDAWLSEDVTPGDLL 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N I P + +R + D + Sbjct: 423 GVAATGAYCYSMSSRYNLIGRPAVVAVRDGRARLILRRETVEDLLS 468 >gi|146312925|ref|YP_001177999.1| diaminopimelate decarboxylase [Enterobacter sp. 638] gi|145319801|gb|ABP61948.1| diaminopimelate decarboxylase [Enterobacter sp. 638] Length = 420 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 115/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIVREKIAALHQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A + + +V L + + ++ Sbjct: 82 RALAAGYDPQADSDAIVFTADLIDSATLARVHELQIPVNAGSVDMLEQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D ++ + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYADLPAALAVLQRYNLTLVGIHMHIGSGVDYT 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + F +E IS GGG+ Y R K + Sbjct: 200 HLEQVCGAMVNQVI-DFGQDLEAISAGGGLSIPYREGEEAIDTDHYYGLWSAARDKISAH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 ++V++ +EPG +V + L V + ++ V++D+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAESGVLVAQVRSVKAMGSRHFVLIDAGFNDLMRPSMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E V+ GD + D Y Sbjct: 319 ALAADGRDLTTAPQVDTVVAGPLCESGDVFTQQEGGKVETRALPVVQPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDHGVARLIRRRQTIQELLA 416 >gi|163840173|ref|YP_001624578.1| diaminopimelate decarboxylase [Renibacterium salmoninarum ATCC 33209] gi|162953649|gb|ABY23164.1| diaminopimelate decarboxylase [Renibacterium salmoninarum ATCC 33209] Length = 483 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 56/424 (13%), Positives = 115/424 (27%), Gaps = 61/424 (14%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 +P +++ + A GV + A K F + + Sbjct: 56 GSPLFVVSETDFRRRAQEFYTAFNEAFTDICGGVDIYYAGKSFLCTEVARWVMDEGLRLD 115 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E+++ GE + K A+ I+ +++ ++ + A Sbjct: 116 TCSGGEMLVAQRAGVPGEKLGLHGNNKSDAEIRRALEIGVGRIVADSLPEIERIDSIAAG 175 Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGE-----------------KCKDKIESE 154 L K+ LR+ P V + G + + + Sbjct: 176 LGTIAKVMLRLTPGVHAHTHEFIATAHEDQKFGLSLATAGQDASSQGANVSPAEQAVLAA 235 Query: 155 IKNVN----GLMFHNNCENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTD 206 + G+ H + F+ + + LGGG Sbjct: 236 HAGKHIEMLGIHCHIGSQIFDAEGFAVAAQRLLGFSADMKSRHGIDFVELDLGGGYGIAY 295 Query: 207 KDYPVKDFCQRLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDIS--- 252 + + + +I +EPG AIV +T V + Sbjct: 296 TEADTPRQAAEIANEMAAVVRAECAELGLTAPRISIEPGRAIVGPSTFTLYQVGTVKTVV 355 Query: 253 ------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDI 302 + + VD + + L + I N + V G+ C +GDI Sbjct: 356 VDTPSGPAERRYISVDGGMSDNPRPVLYDADYTAILANRSSSADAVLSRVVGKHCESGDI 415 Query: 303 FGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 + + GD ++ Y + +N + P + +R + D Sbjct: 416 VVRDVYLPGDIIAGDLLAVPATGAYCWVLSSNYNYLPRPGVVAVRGGTARVIVRAETEED 475 Query: 362 YYNN 365 + Sbjct: 476 LLSR 479 >gi|209545489|ref|YP_002277718.1| diaminopimelate decarboxylase [Gluconacetobacter diazotrophicus PAl 5] gi|209533166|gb|ACI53103.1| diaminopimelate decarboxylase [Gluconacetobacter diazotrophicus PAl 5] Length = 452 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 49/387 (12%), Positives = 109/387 (28%), Gaps = 28/387 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP +++ L ++AG + A+K + L G S Sbjct: 47 VGTPTWVMGAGTLRARYRRLAGALRDAGLAPSIHFAVKANDHLAVLRILAAEGAGADVVS 106 Query: 60 LYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ ++ +D AV I + +L+ D A + Sbjct: 107 GGELRRARAAGIPAAGIVFSGVGKSRDELHLAVTEGIAHIAVESAEELDVVSDVAVAAGR 166 Query: 117 KIG--LRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKNVNGLMFHNNCEN 169 LR+NP V ++ G + + ++ L F + + Sbjct: 167 TARITLRVNPDVDAGTHEKITTGLSTNKFGIAYARAADLYARAAALPGLHPLGFSVHIGS 226 Query: 170 KSFLCFSAMLKNIE-----KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEF 221 + + + + GGG+ +D ++ Sbjct: 227 QIVAMAPYRAAFARVADLVRAVRARGLSVGLVDCGGGLGIRYRDEVEGAPMALAGAIRAE 286 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI---SENIKNLVIVDSSVEAHVPDYLLYQES 278 V++ +EPG + L + V+ + + +I+D+++ L Sbjct: 287 LGDLDVRLAIEPGRWLAGPAGVLLSRVILRKAGQDGLPPFLILDAAMNDLARPSLYDSWH 346 Query: 279 ATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + + + V G C + D F + G ++ D Y + + Sbjct: 347 GILPLSARDAVQPVESVNVVGPVCESADSFATGRMLPRMGDGAAVALLDTGAYGMVMSST 406 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYN 360 +NG + + + Sbjct: 407 YNGRPLAAQVLVDGGRWSVIRARQPVE 433 >gi|312194804|ref|YP_004014865.1| diaminopimelate decarboxylase [Frankia sp. EuI1c] gi|311226140|gb|ADP78995.1| diaminopimelate decarboxylase [Frankia sp. EuI1c] Length = 469 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 50/393 (12%), Positives = 113/393 (28%), Gaps = 39/393 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP + +D+ + A K F + + + E Sbjct: 52 GTPAFFLDEDDFRARAQAWRAGF--PDGDVYYAGKAFLCRAVARWVADEGLSLDVCTGGE 109 Query: 63 VMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F ++ K + AV I+ ++ +++ + A+ ++ Sbjct: 110 LAVAASVDFPPARLLFHGNNKSVEELRRAVAYGVGRIVLDSFAEIERLATVARAAGVRQR 169 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHNNC 167 + +R+ P V + + G ++ + GL H Sbjct: 170 VLIRVTPGVEAHTHEYIATGQEDQKFGFSLASGAALDAIGRVLAATDALELVGLHAHIGS 229 Query: 168 ENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + F M+ + ++ + LGGG+ + + Sbjct: 230 QIFDTAGFGLAAHRMVGLLATVRDAHGVELPELDLGGGLGIAYTGEDAPLPVADVADRLH 289 Query: 224 KYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVP 270 + +EPG A+V TT V + E + V VD + ++ Sbjct: 290 TIVGKECASAGLAVPRLAVEPGRAMVGPTTITLYRVGTVKELPGLRTYVSVDGGMSDNIR 349 Query: 271 DYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAG 325 L + + + G+ C +GD+ V GD ++ Sbjct: 350 TALYDARYTARLVSRPGAAEHHVVTLVGKHCESGDVVAHDVSLPADVAPGDLVAVPATGA 409 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 Y+ + + +N + P + +R + Sbjct: 410 YHRSMASNYNHVGRPPVVAVRAGAARVVVRRET 442 >gi|225855467|ref|YP_002736979.1| diaminopimelate decarboxylase [Streptococcus pneumoniae JJA] gi|225722559|gb|ACO18412.1| diaminopimelate decarboxylase [Streptococcus pneumoniae JJA] Length = 416 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 115/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + G E + D E TI + + + A Sbjct: 79 ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD ++ D + + +N Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLAIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|302670604|ref|YP_003830564.1| diaminopimelate decarboxylase LysA [Butyrivibrio proteoclasticus B316] gi|302395077|gb|ADL33982.1| diaminopimelate decarboxylase LysA [Butyrivibrio proteoclasticus B316] Length = 429 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 62/391 (15%), Positives = 119/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+YL D++ L++N N G K A+K + + L G SS Sbjct: 19 PTPFYLYDEKGLVDNAKAVYDAFSWNKGFKEYFAVKATPNPVLMEILKSLGCGFDCSSET 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML G ++ E I + + ++ ++ K+ + I Sbjct: 79 ELMLSQAIGASGADIMFSSNDTPAREYAYADKLGAIINLDDFTHIDFLEETIGKIPETIS 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE---------IKNVN-GLMFHNNCEN 169 R NP + N S+ G E+ ++ L + Sbjct: 139 CRYNPGGVFQMSNGIMDNPGDSKYGMTKDQLFEAYKILRSKGARNFGIHAFLASNTVTNE 198 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + +I +I+L GG+ + + + + E + I Sbjct: 199 YYPQLAGQLFELAVELQKETGCKIAFINLSGGVGIPYRPDQEANDIKAIGEGVRRQFENI 258 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G ++ L T + K + VD+ + + Sbjct: 259 LVPAGMGDVSIFTEMGRFMMGPYGALVTKAIHEKHIYKEYIGVDACAVNLMRPAMYGSYH 318 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F +++GD + D + + Sbjct: 319 HITVLGKENEPLDHVYDVTGSLCENNDKFAIDRQLPEIEMGDYLFIHDTGAHGYAMGYNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 NG + DG+++ IR + DY+ Sbjct: 379 NGKLKCAELLLKEDGSVQMIRRAETARDYFA 409 >gi|197284248|ref|YP_002150120.1| diaminopimelate decarboxylase [Proteus mirabilis HI4320] gi|194681735|emb|CAR40899.1| diaminopimelate decarboxylase [Proteus mirabilis HI4320] Length = 414 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 53/400 (13%), Positives = 125/400 (31%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + + +++ + A K + + + Q S SL E Sbjct: 18 GTPLWIYQGETISEHIEQLK-AFDV----VRFAQKACSNIHILRLMKQQGVKVDSVSLGE 72 Query: 63 VMLGH-EKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + F G E + I+ V+ + ++ L + ++ Sbjct: 73 IERALVAGFQGGRERSEIIFTADLLDEKTIERVVELDIPVNAGSIDMLRQLGER--HQGH 130 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 + +RINP + + S+ G +D I ++ G H Sbjct: 131 AVWIRINPGFGHGHSQKTNTGGENSKHGIWYEDVPEALAVINQYNLSLVGFHMHIGSGVD 190 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224 + +++ + ++ I+ IS GGG+ + + + Sbjct: 191 -YQHLASVCDAMVEQVLTSNVDIKAISAGGGLSTPYQQGDKRVDLNHYFSLWDSARQRIA 249 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279 + +++ +EPG +V + L + V + ++ V+VD+ + + Sbjct: 250 QHLGHDIELEIEPGRFLVAESGVLVSQVRAVKSMGNRHYVLVDAGFSDLMRPAMYGSYHQ 309 Query: 280 TIYPNTG--------PYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + +V G C +GD+F + P ++GD + D Sbjct: 310 ITLLDKYGQLKSSEFQQETIVAGPLCESGDVFTQQEGGMVAPRLLPPAEVGDYLVIHDTG 369 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 370 AYGASMSSNYNSRPLIPEVLISQGIPQLIRRRQTIEELLA 409 >gi|281414194|ref|ZP_06245936.1| diaminopimelate decarboxylase [Micrococcus luteus NCTC 2665] Length = 490 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 59/425 (13%), Positives = 112/425 (26%), Gaps = 62/425 (14%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP ++D+ A G + A K + Sbjct: 58 GTPLLVVDEDDFRARARAFREGFDAAFADLCGGADVYYAGKSMLTLSTARWAAEEGLRVD 117 Query: 57 SSSLYEVMLGHEK--FGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQK 113 ++S E+ + + + D E+ A+ + II +++ +L A + Sbjct: 118 TASGGELAIALATGVYPAHIGLHGNNKSDAELRTALEAGVGRIIVDSLDELTHLAALAAE 177 Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG----------- 160 + LR+ P V + G NV G Sbjct: 178 AGHRAPVMLRLTPGVHAHTHDFIATAHEDQKFGLSLAPASTDRDGNVAGRSPAAVAVDTA 237 Query: 161 ----------LMFHNNCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTD 206 + H + F +L+ + + ++ + LGGG Sbjct: 238 LATESIDLLGVHCHIGSQIFEAEGFGLAAGRVLEFLAEVKAEHGVELAELDLGGGHGIAY 297 Query: 207 KDYPVKDFCQRLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + + ++ LEPG AI TV Sbjct: 298 TAVDEPRPAAEIADALADDVQKTVERLGLRCPRVSLEPGRAISGPAGLTLYTVGVTKTVD 357 Query: 256 ----------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGD 301 + V VD + + L + A P + V G+ C +GD Sbjct: 358 ADAPDGGTAARRYVAVDGGMSDNPRPVLYDADYTAVSARRTSEAEPALSRVVGKHCESGD 417 Query: 302 IFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 I + + GD ++ Y + +N + P + + IR + Sbjct: 418 ILVRDVYLPADLGRGDLLAVPATGAYTHVMSSNYNALARPAVVAVSGGLARVIIRRETQE 477 Query: 361 DYYNN 365 D + Sbjct: 478 DLFAR 482 >gi|325854990|ref|ZP_08171706.1| diaminopimelate decarboxylase [Prevotella denticola CRIS 18C-A] gi|327313297|ref|YP_004328734.1| diaminopimelate decarboxylase [Prevotella denticola F0289] gi|325483968|gb|EGC86908.1| diaminopimelate decarboxylase [Prevotella denticola CRIS 18C-A] gi|326946186|gb|AEA22071.1| diaminopimelate decarboxylase [Prevotella denticola F0289] Length = 385 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 68/372 (18%), Positives = 123/372 (33%), Gaps = 26/372 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I TP+Y D L L +R +A + A+K A + ++Q G S Sbjct: 13 IDTPFYYYDCNLLRETLQAIHEEVRTHADFIVHYAVKANANAKVLKIISQAGMGADCVSG 72 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116 E+ + F + Y K + + D FN +V++L A + K Sbjct: 73 GEIRRCLDSGFPAGSIVYAGVGKADWEINLGLDHDIFCFNVESVAELEVINSLAARKGKV 132 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168 + RINP V + ++ G ++ GL FH + Sbjct: 133 ANVCFRINPDVGAHTHKMITTGLAENKFGIAMQDMVPAIREAERMANIRFIGLHFHIGSQ 192 Query: 169 NKSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--DFCQRLKEFSE 223 + + I+ + E I++GGG+ K + Sbjct: 193 ILDMTDYRHLCSRINEIQNGLEEQDIRAENINVGGGLGIDYTQPDSKAVPDFKAYFYTFA 252 Query: 224 KY-----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277 +Y +++ E G A+V +L T L + + K IVD+ + + L + Sbjct: 253 RYLKLREGQKLHFELGRAVVGQMGSLITRTLYVKQGTAKQFAIVDAGMTDLIRPALYHAR 312 Query: 278 SA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + V G C + D+F + V GD I+ Y + +N Sbjct: 313 HEIENLSSDGPEQIYDVVGPICESSDVFAKDIPLNTVHRGDLIALRSAGAYGEIMASQYN 372 Query: 336 GINMPTIAVKNV 347 +P + + Sbjct: 373 CRRLPVGYLSDE 384 >gi|148989978|ref|ZP_01821253.1| OxaA-like protein precursor [Streptococcus pneumoniae SP6-BS73] gi|149007453|ref|ZP_01831096.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74] gi|149021928|ref|ZP_01835915.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72] gi|147761025|gb|EDK67994.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74] gi|147924638|gb|EDK75724.1| OxaA-like protein precursor [Streptococcus pneumoniae SP6-BS73] gi|147929966|gb|EDK80954.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72] gi|332071955|gb|EGI82443.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA17545] Length = 416 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + G E + D E TI + + + A Sbjct: 79 ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V E + + VD+S + + Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP V G C D F +IGD + D + + +N Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|150006338|ref|YP_001301082.1| diaminopimelate decarboxylase [Bacteroides vulgatus ATCC 8482] gi|254881754|ref|ZP_05254464.1| diaminopimelate decarboxylase [Bacteroides sp. 4_3_47FAA] gi|294776142|ref|ZP_06741633.1| diaminopimelate decarboxylase [Bacteroides vulgatus PC510] gi|319643721|ref|ZP_07998337.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_40A] gi|149934762|gb|ABR41460.1| diaminopimelate decarboxylase [Bacteroides vulgatus ATCC 8482] gi|254834547|gb|EET14856.1| diaminopimelate decarboxylase [Bacteroides sp. 4_3_47FAA] gi|294450016|gb|EFG18525.1| diaminopimelate decarboxylase [Bacteroides vulgatus PC510] gi|317384663|gb|EFV65626.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_40A] Length = 386 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 63/366 (17%), Positives = 116/366 (31%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D L L K + A+K A + + + G S Sbjct: 13 LETPFYYYDVNVLRETLSCINKEAGKYNNFCVHYAVKANANHKVLTIIRESGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115 E+ F Y K + + D FN +V +L + A + Sbjct: 73 GEIRAAIKAGFPTNKIVYAGVGKTDWEINLGLDYDIFCFNVESVPELEIINELAAAKGKT 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 ++ RINP+V ++ G +D GL FH + Sbjct: 133 ARVAFRINPNVGAHTHANITTGLAENKFGISMEDMDKVIDMAGTLPHVKFVGLHFHIGSQ 192 Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F A+ + + +E I++GGG+ + + F+ + Sbjct: 193 ILDMGDFVALCNRVNELQEKLYARQIIVEHINVGGGLGIDYAHPNRQAIPNFTEYFATYH 252 Query: 226 SV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275 ++ E G A+V +L + V+ + + + D+ + + L Y Sbjct: 253 KHLKLRPQQTLHFELGRAVVGQCGSLISKVIYVKQGTNKQFAILDAGMTDLIRPALYQAY 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + I T V G C + D+FG+ GD + Y + +N Sbjct: 313 HKIENITSEEPMETYDVVGPICESSDVFGKAIDLNKAHRGDLFALRSAGAYGEIMASAYN 372 Query: 336 GINMPT 341 +P Sbjct: 373 CRALPK 378 >gi|225026452|ref|ZP_03715644.1| hypothetical protein EUBHAL_00701 [Eubacterium hallii DSM 3353] gi|224956218|gb|EEG37427.1| hypothetical protein EUBHAL_00701 [Eubacterium hallii DSM 3353] Length = 417 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 114/392 (29%), Gaps = 31/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + GT SSL Sbjct: 20 PTPFHLYDEKGIRQTARDLYKAFSWNEGFKEYFAVKATPTPAILKILQEEGCGTDCSSLT 79 Query: 62 EVMLG-HEKF-GGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+M+ F G + ++ E I + ++ ++ KD + Sbjct: 80 ELMMSDRCGFADGNSIMFSSNETPAEEFILAKKLGAIINLDDITHIDFLKDACGIPERIC 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCE 168 + D ++ G E+ + + V H Sbjct: 140 CRYNPGGYFSLGTDIMDNPG-DAKYGMTKPQIFEAFKRLKREGVKEFGIHSFLASNTVSN 198 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 S + + + I +I+L GG+ + + E K + Sbjct: 199 EYYPALASILFNLAVELKENLGVHIGFINLSGGVGIPYTPDKEPNDIFAIGEGVRKAYEE 258 Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I + E G ++ L + K + VD+ + + Sbjct: 259 ILVPAGMGDVKIFTELGRFMLAPHGHLVVKAIHEKHTYKEYIGVDACAANLMRPAMYGAY 318 Query: 278 SATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 +T V G C D F + +GD + D + + Sbjct: 319 HHITVMGKENEPCDHTYDVVGSLCENNDKFAIDRKLPKIDMGDLLVLHDTGAHGFSMGYN 378 Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 +NG + DG+ + IR + DY+ Sbjct: 379 YNGRLKSAEILLQEDGSTRMIRRAETPEDYFA 410 >gi|32475756|ref|NP_868750.1| diaminopimelate decarboxylase [Rhodopirellula baltica SH 1] gi|32446299|emb|CAD76127.1| diaminopimelate decarboxylase [Rhodopirellula baltica SH 1] Length = 427 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 55/390 (14%), Positives = 113/390 (28%), Gaps = 31/390 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+ L + + N G + A+K + + + G SS+ Sbjct: 21 PTPFVLYHEDGIRARARELTDAFAWNEGFQQYFAVKATPNPHIVAMMAEEGGGADCSSVA 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++ G+ + E + I +T +++ + Sbjct: 81 ELITCERLGITGQDVMFTSNNTTMEEFEIANKLGAIINLDTPHHIDQIAQLSPLPEMVS- 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL 173 + + + ++ G + ++ + GL + Sbjct: 140 -FRFNPGPERQGNVIIGDPKEAKFGSTREQLMDGYRRCAELGISRFGLHAMVVSNELNIE 198 Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + +E I+LGGGI + + K Sbjct: 199 ALLQTAEMLFELAAEIHRETGISVECINLGGGIGVPYQPGQEPVDLPAFGDGVRKLYESI 258 Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +I +E G A+ L T V++ + K+ V VD+ + + + Sbjct: 259 LVPAGIAPVRILMENGRAMTGPFGYLITKVINQKSSYKDYVGVDACMSNLMRPGMYGAYH 318 Query: 279 ATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 T + G C D F ++GD D + + + Sbjct: 319 HITVMGKEDQPADRTVDIVGSLCENNDKFAIDRKMPATEVGDIAVIHDAGAHGHSMGFQY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYY 363 NG V N G +AIR +++DY+ Sbjct: 379 NGRLRSAEIVFNDAGEFRAIRRAETFDDYF 408 >gi|212691487|ref|ZP_03299615.1| hypothetical protein BACDOR_00979 [Bacteroides dorei DSM 17855] gi|237726231|ref|ZP_04556712.1| diaminopimelate decarboxylase [Bacteroides sp. D4] gi|265751775|ref|ZP_06087568.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_33FAA] gi|212665967|gb|EEB26539.1| hypothetical protein BACDOR_00979 [Bacteroides dorei DSM 17855] gi|229434757|gb|EEO44834.1| diaminopimelate decarboxylase [Bacteroides dorei 5_1_36/D4] gi|263236567|gb|EEZ22037.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_33FAA] Length = 386 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 114/366 (31%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D L L K + A+K A + + + G S Sbjct: 13 LETPFYYYDVNVLRETLSCINKEAGKYNNFCVHYAVKANANHKVLTIIRESGLGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKK 117 E+ F Y K + + D FN +V +L + A K Sbjct: 73 GEIRAAIKAGFPTNKIVYAGVGKTDWEINLGLDYDIFCFNVESVPELEIINELASAKGKT 132 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 RINP+V ++ G +D GL FH + Sbjct: 133 ARVAFRINPNVGAHTHANITTGLAENKFGISMEDMDKVIDMAGTLPHVKFVGLHFHIGSQ 192 Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F A+ + + +E I++GGG+ + + F+ + Sbjct: 193 ILDMGDFVALCNRVNELQEKLYARQIIVEHINVGGGLGIDYAHPNRQAIPNFTEYFATYH 252 Query: 226 SV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275 ++ E G A+V +L + V+ + + + D+ + + L Y Sbjct: 253 KHLKLRPQQTLHFELGRAVVGQCGSLISKVIYVKQGANKQFAILDAGMTDLIRPALYQAY 312 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + I T V G C + D+FG+ GD + Y + +N Sbjct: 313 HKIENITSEEPMETYDVVGPICESSDVFGKAIDLNKAHRGDLFALRSAGAYGEIMASAYN 372 Query: 336 GINMPT 341 +P Sbjct: 373 CRALPK 378 >gi|284007782|emb|CBA73630.1| diaminopimelate decarboxylase [Arsenophonus nasoniae] Length = 414 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 118/400 (29%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + + SL E Sbjct: 14 GTPIWIYDSEVITQAIKQL-SAFDV----IRFAQKACSNIHILRLMREQGVKVDAVSLGE 68 Query: 63 VMLGH-EKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + F + + + + D + ++ L + K H Sbjct: 69 IERALVAGFRPGSEKAEIVFTADVIEKQTIERVIELDIPVNVGSIDMLVQLGKA--KRHH 126 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 I LRINP + + S+ G D I + G+ H Sbjct: 127 PIWLRINPGFGHGHSQKTNTGGENSKHGIWFSDLPLAIEKINQYQLMLVGMHMHIGSGVD 186 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224 + + + + ++ I+ IS GGG+ + + + E+ Sbjct: 187 -YCHLAKVCDAMVEQVILSGCDIQAISAGGGLSIPYHLAEERIDINHYFALWHGARERIS 245 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 + + + +EPG +V + L V + KN I VDS + + Sbjct: 246 AYLGHPITLEIEPGRYLVAESGVLLAEVRAVKRMGKNHYILVDSGFNDLMRPTMYGCYHH 305 Query: 280 --------TIYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 N +V G C +GD+F + + +GD + F D Sbjct: 306 ISVLAADNRDLTNENLRETLVAGPLCESGDVFTQANNGAVVPRLLPEIYVGDYLVFHDTG 365 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + R + + Sbjct: 366 AYGASMSSNYNSRPLIAEVMYLNGEPKLIRRRQTLAELLA 405 >gi|328907552|gb|EGG27318.1| diaminopimelate decarboxylase [Propionibacterium sp. P08] Length = 478 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 66/405 (16%), Positives = 130/405 (32%), Gaps = 45/405 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D+ + T +G + A K F + ++Q + + E Sbjct: 63 GSPLYVLDESDFRQRVRTFRDAF--SGWDVYYAGKAFLTRTIASWIDQEGLCLDTCTGGE 120 Query: 63 VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 ++ + + K D A+ + II +++ ++ + + ++ H + Sbjct: 121 LLTALQGGMDPARIGLHGNNKSVDELKLALSAGVGRIIVDSLDEITRIEQLCRENGWHAR 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G S + ++ G+ H + Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSNVIDLLGIHSHIGSQ 240 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +K +E+ + + + LGGG + L E + Sbjct: 241 IFDTAGFEVAARRTMKLLEQFRQATGSALAELDLGGGFGIAYTSQDSPATAESLAEALRE 300 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267 I LEPG AIV TT TV + + V VD + Sbjct: 301 IVAVEARGRGMEIPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRIYVSVDGGMSD 360 Query: 268 HVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 ++ L E + + N P V G+ C AGDI + V GD I+ Sbjct: 361 NIRPALYAAEYSAVVANRASKIAPVLCRVVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420 Query: 323 VAGYNINRKNWFNGINMPTIAVK---NVDGTIKAIREFSYNDYYN 364 Y+ + + +N + + + +R S +D Sbjct: 421 AGAYSRSMASNYNHVPRSAVVRVGTGDDPDVSVLLRRESIDDLLA 465 >gi|314927466|gb|EFS91297.1| diaminopimelate decarboxylase [Propionibacterium acnes HL044PA1] Length = 478 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 66/405 (16%), Positives = 130/405 (32%), Gaps = 45/405 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D+ + T +G + A K F + ++Q + + E Sbjct: 63 GSPLYVLDESDFRQRVRTFRDAF--SGWDVYYAGKAFLTRTIASWIDQEGLCLDTCTGGE 120 Query: 63 VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 ++ + + K D A+ + II +++ ++ + + ++ H + Sbjct: 121 LLTALQGGMDPARIGLHGNNKSVDELKLALSAGVGRIIVDSLDEITRIEQLCRENGWHAR 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G S + ++ G+ H + Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSNVIDLLGIHSHIGSQ 240 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +K +E+ + + + LGGG + L E + Sbjct: 241 IFDTAGFEVAARRTMKLLEQFRQATGSALAELDLGGGFGIAYTSQDSPATAESLAEALRE 300 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267 I LEPG AIV TT TV + + V VD + Sbjct: 301 IVAVEARGRGMEIPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRIYVSVDGGMSD 360 Query: 268 HVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 ++ L E + + N P V G+ C AGDI + V GD I+ Sbjct: 361 NIRPALYAAEYSAVVANRASKIAPVLCRVVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420 Query: 323 VAGYNINRKNWFNGINMPTIAVK---NVDGTIKAIREFSYNDYYN 364 Y+ + + +N + + + +R S +D Sbjct: 421 AGAYSRSMASNYNHVPRSAVVRVGTGDDPDVSVLLRRESIDDLLA 465 >gi|313837653|gb|EFS75367.1| diaminopimelate decarboxylase [Propionibacterium acnes HL037PA2] gi|314972593|gb|EFT16690.1| diaminopimelate decarboxylase [Propionibacterium acnes HL037PA3] Length = 478 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 66/405 (16%), Positives = 130/405 (32%), Gaps = 45/405 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D+ + T +G + A K F + ++Q + + E Sbjct: 63 GSPLYVLDESDFRQRVRTFRDAF--SGWDVYYAGKAFLTRTIASWIDQEGLCLDTCTGGE 120 Query: 63 VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 ++ + + K D A+ + II +++ ++ + + ++ H + Sbjct: 121 LLTALQGGMDPARIGLHGNNKSVDELKLALSAGVGRIIVDSLDEITRIEQLCRENGWHAR 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G S + ++ G+ H + Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSNVIDLLGIHSHIGSQ 240 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F +K +E+ + + + LGGG + L E + Sbjct: 241 IFDTAGFEVAARRTMKLLEQFRQATGSALAELDLGGGFGIAYTSQDSPATAESLAEALRE 300 Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267 I LEPG AIV TT TV + + V VD + Sbjct: 301 IVAVEARGRGMEIPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRIYVSVDGGMSD 360 Query: 268 HVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 ++ L E + + N P V G+ C AGDI + V GD I+ Sbjct: 361 NIRPALYAAEYSAVVANRASKIAPVLCRVVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420 Query: 323 VAGYNINRKNWFNGINMPTIAVK---NVDGTIKAIREFSYNDYYN 364 Y+ + + +N + + + +R S +D Sbjct: 421 AGAYSRSMASNYNHVPRSAVVRVGTGDDPDVSVLLRRESIDDLLA 465 >gi|227357849|ref|ZP_03842197.1| diaminopimelate decarboxylase [Proteus mirabilis ATCC 29906] gi|227161959|gb|EEI46977.1| diaminopimelate decarboxylase [Proteus mirabilis ATCC 29906] Length = 414 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 52/400 (13%), Positives = 124/400 (31%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + + +++ + A K + + + Q S SL E Sbjct: 18 GTPLWIYQGETISEHIEQLK-AFDV----VRFAQKACSNIHILRLMKQQGVKVDSVSLGE 72 Query: 63 VMLGH-EKFGGET----HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + F G + D + + D + ++ L + ++ Sbjct: 73 IERALVAGFQGGRERSEIVFTADLLDEKTIERVVELDIPVNAGSIDMLRQLGER--HQGH 130 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 + +RINP + + S+ G +D I ++ G H Sbjct: 131 AVWIRINPGFGHGHSQKTNTGGENSKHGIWYEDVPEALAVINQYNLSLVGFHMHIGSGVD 190 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224 + +++ + ++ I+ IS GGG+ + + + Sbjct: 191 -YQHLASVCDAMVEQVLTSNVDIKAISAGGGLSTPYQQGDKRVDLNHYFSLWDSARQRIA 249 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279 + +++ +EPG +V + L + V + ++ V+VD+ + + Sbjct: 250 QHLGHDIELEIEPGRFLVAESGVLVSQVRAVKSMGNRHYVLVDAGFSDLMRPAMYGSYHQ 309 Query: 280 TIYPNTG--------PYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324 + +V G C +GD+F + P ++GD + D Sbjct: 310 ITLLDKYGQLKSSEFQQETIVAGPLCESGDVFTQQEGGMVAPRLLPPAEVGDYLVIHDTG 369 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R + + Sbjct: 370 AYGASMSSNYNSRPLIPEVLISQGIPQLIRRRQTIEELLA 409 >gi|21672689|ref|NP_660756.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008347|sp|Q8K9C4|DCDA_BUCAP RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|21623329|gb|AAM67967.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 415 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 59/396 (14%), Positives = 123/396 (31%), Gaps = 42/396 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 ++P+++ D + ++ + A K + + + Q + SL E Sbjct: 25 QSPFWVYDSNIIHKKINLLKEFD-----IVRFAQKACSNIHILRLMKQKNIKVDAVSLGE 79 Query: 63 VMLGH-EKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + F E + + + V+ + ++ L + + + Sbjct: 80 IERALVAGFKPNSNEIIFTADLFDEETLSKVIDFKIPVNAGSIDMLEQLGKLS--PGHHV 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFLC 174 LRINP + + S+ G I+ + GL H + Sbjct: 138 WLRINPGFGHGHSKKTNTGGENSKHGIWNPRLAIPIIKKYKLKLIGLHMHIGSGVN-YKH 196 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224 + + + ++ +I +IS GGG+ ++ ++ Sbjct: 197 LKKVGQAMIEKAMEINEKILFISAGGGLPIPYTFNEKPIDTKKYFIIWDEARKKISRFLN 256 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +Q+ +EPG +V + L + V I KN V++D+ + + Sbjct: 257 TPIQLEIEPGRFLVAESGILISQVRAIKKMGDKNFVLIDAGFNDLMRPTMYGSYHHVSVV 316 Query: 284 NTGPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 + G C +GDIF +KIGD + F DV Y Sbjct: 317 TKDDRNIHETETIDTIIGGPLCESGDIFTQKEGGNITTRKLPILKIGDYLIFHDVGAYGA 376 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R N+ N Sbjct: 377 SMSSNYNTRPLIQEILLENNTFRTIRRRQKINELLN 412 >gi|255532226|ref|YP_003092598.1| diaminopimelate decarboxylase [Pedobacter heparinus DSM 2366] gi|255345210|gb|ACU04536.1| diaminopimelate decarboxylase [Pedobacter heparinus DSM 2366] Length = 384 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 122/361 (33%), Gaps = 25/361 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP+Y D L N L+ K + ALK + + G S Sbjct: 13 LETPFYYYDLNLLQNTLNACANAAKLYNFHVHYALKANFNPAVLKKVKAIGFGADCVSGG 72 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK-- 116 EV E F + + K + + + D FN +V +L + A K K Sbjct: 73 EVNRAIETGFNPKQVVFAGVGKSDKEINLALDQDIFCFNVESVQELEVINELAGKKGKIA 132 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169 KI +RINP+V ++ G + SE G+ FH + Sbjct: 133 KIAIRINPNVDAHTHHNITTGLDENKFGVNSWDLPKCVETLKVSEHLEFLGIHFHIGSQI 192 Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEF 221 + + + F ++ +++GGG+ + + + EF Sbjct: 193 TNLDVYKNLCVRVNEFAIWFEERGFNVKILNVGGGLGIDYHNPEQQIPDFDAYFKIFSEF 252 Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA 279 E K +++ E G A+V +L + VL I K +V D+ + + L Sbjct: 253 LEVKAGQEVHFELGRALVGQCASLISRVLYIKNGKKKNFVVLDAGMTELMRPALYQAYHK 312 Query: 280 TIYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + G T + G C + D FG+ + GD + Y + +N Sbjct: 313 IENLSRGNQTTLKYDIVGPICESTDCFGKEVEQPESFRGDLYAIRSAGAYGEVMASKYNL 372 Query: 337 I 337 Sbjct: 373 R 373 >gi|57239261|ref|YP_180397.1| diaminopimelate decarboxylase [Ehrlichia ruminantium str. Welgevonden] gi|57161340|emb|CAH58263.1| putative diaminopimelate decarboxylase [Ehrlichia ruminantium str. Welgevonden] Length = 420 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 70/384 (18%), Positives = 129/384 (33%), Gaps = 22/384 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y + NN N + A+K + + L+ G + S Sbjct: 30 IGTPVYCYSLNAIKNNYIQFKENLPN-NSIICYAVKSNSNLSILSLLSSLGSGADAVSEG 88 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHK-- 116 E+ ++ K + + + + ++ +L + + Sbjct: 89 EIRRAITAGISPNKIVFSGVGKTEQEISFALDNRILQLNVESIEELQLINKISYHKNIIA 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIESEIKNVN--GLMFHNNCEN-- 169 + +RINP+++ + ++ G S + N+ G+ H + Sbjct: 149 PVSIRINPNINANTNDKITTGLKVNKFGIPEESLDQVFNSSLTNIKIIGISVHIGSQIAN 208 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFSEK 224 F +K I K F I + +GGG+ K+ + LK EK Sbjct: 209 LGIFQNTIDKVKRIVKIFEQHNIHILRVDMGGGLGIPYKNSDIFPTIQEYTNLLKNNFEK 268 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280 S I EPG AIV NT L VL S KN +++D+ + + L E Sbjct: 269 ESYNIICEPGRAIVGNTGILLAKVLYHKSNYEKNHLVLDTGMNDLIRPALYNAEHTIIPA 328 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + + + G C + D F ++ V + ++ V Y + + +N + Sbjct: 329 VVSSKSHLSFDIVGPICESDDTFAYSYWINNVDNNEIVAICTVGAYGSSMSSNYNSRPLV 388 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + N D +YND Sbjct: 389 PEVIVNQDNYHIIRHRQTYNDMLK 412 >gi|311087329|gb|ADP67409.1| diaminopimelate decarboxylase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 415 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 60/394 (15%), Positives = 116/394 (29%), Gaps = 42/394 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D + ++ + A K + + + + SL E+ Sbjct: 27 PFWVYDADIIYKKINLLRKFDV-----IRFAQKSCSNINILRLMKNKNVKIDAVSLGEIE 81 Query: 65 LGH-EKFGG--ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 F + D E ++ + ++ L + + + L Sbjct: 82 RALLSGFKPSTNEIIFTADILDKETLLKVAKYKIPVNAGSLDMLKQLGKIS--PGHHVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFLCFS 176 RINP Y + S+ G + I+ + GL H Sbjct: 140 RINPRFGYGHSKKTNTGGENSKHGIWHPEQAIPIIKKYKLKLIGLHMHIGSGVNYLHLKK 199 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE----------KYS 226 I+ F +I IS+GGG+ K ++ + Sbjct: 200 VSQAMIKYAF-QLNQKISSISVGGGLPIPYKFNDQPIDIKKYFMLWDIARKKISKFLGEK 258 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 +++ +EPG +V + L + V KN V+VD + + Sbjct: 259 IELEIEPGRFLVAESGILISKVWATKKMGNKNFVLVDVGFNDLMRPTMYGSYHHISVIYG 318 Query: 286 GPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNINR 330 V G C +GDIF + +K+GD + F D Y Sbjct: 319 DDRKMNEKETIDTVVAGPLCESGDIFTQKEGGTVQTRKLPTIKVGDYLIFHDTGAYGAAM 378 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + + + +I R + + N Sbjct: 379 SSNYNTRPLIPEILLKNNDSIVIRRRQTIEEILN 412 >gi|238796567|ref|ZP_04640074.1| Diaminopimelate decarboxylase [Yersinia mollaretii ATCC 43969] gi|238719545|gb|EEQ11354.1| Diaminopimelate decarboxylase [Yersinia mollaretii ATCC 43969] Length = 420 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 52/398 (13%), Positives = 115/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + ++ + + A K + + + + S SL E+ Sbjct: 27 PVWAYDGDIIAQRINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 F + D ++ + ++ L++ A + Sbjct: 82 RALVAGFQPGQEPAEIVFTADLLDQATLLRVTELRIPVNAGSIDMLDQLGQHA--PGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G +D ++ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYQDLPQAIEKIAQYGLTLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + ++ I IS GGG+ + + + Sbjct: 199 QHLEQVCDAMVEQVITLGQDISAISAGGGLSIPYQVGDDEIDTEHYYGLWNSARERIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V + +EPG +V + L V + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLIAQVRAVKEMGSRHYVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E +IGD + F D Y Sbjct: 319 LLPADGRSLTAEPLIETVVGGPLCESGDVFTQEAGGGLETRALPAARIGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R+ + + Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRKQTIEELIA 416 >gi|325568636|ref|ZP_08144929.1| diaminopimelate decarboxylase [Enterococcus casseliflavus ATCC 12755] gi|325157674|gb|EGC69830.1| diaminopimelate decarboxylase [Enterococcus casseliflavus ATCC 12755] Length = 438 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 66/400 (16%), Positives = 123/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ ++ + + + A K F M + S Sbjct: 25 GTPLYVYSVSEIREECQKIQAQFLTRYSKTRAAYAAKAFCTTAMLQVIKSEGLSLDVVSG 84 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F E +N K + A+ II + + ++ + Q+ Sbjct: 85 GELYTAIQADFPAEHIEFNGNNKSIEELAAALDYGVGRIIVDGIQEVGLIRALCQEKQVV 144 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 KI LRI P VS S + S+ G ++ I++ + GL FH Sbjct: 145 AKILLRITPEVSVSTHQFISTGQKDSKFGIPLDEEILFPLVEEVIQAPELDFYGLHFHVG 204 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGI-----------HFTDKDYPV 211 + A + + ++ ++GGG ++ PV Sbjct: 205 SQLSDNRSHLAAVDAALALVQTIHERFDYWIKELNVGGGFGVRYTDADIRQPYSYFLDPV 264 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + + I +EPG +IV T+ I +D + ++ Sbjct: 265 MEKIDAFYAQHQSERPTIVIEPGRSIVAEAGISLHTIGSIKTLPGIRTYASIDGGMTDNI 324 Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L I N + G++C + DI + PV+ GD + Sbjct: 325 RPGLYQATYTGILANRASEAATQKITISGKACESTDILVKDLALPPVETGDLFATFATGA 384 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + +P + A++ SY N Sbjct: 385 YGYSMASSYNNLQIPAVVFVENGQAELAVKRQSYEQMLQN 424 >gi|319938690|ref|ZP_08013054.1| diaminopimelate decarboxylase [Streptococcus anginosus 1_2_62CV] gi|319811740|gb|EFW08006.1| diaminopimelate decarboxylase [Streptococcus anginosus 1_2_62CV] Length = 416 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 115/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G +S Sbjct: 19 PTPFHLYDEKGIRATARALQKAFSWNQGFKEYFAVKATPNPTILKILKEEGCGVDCASYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ + F G + E+ TI + + ++ A Sbjct: 79 ELLMSQKVGFSGNDMMLSSNDTPAKEMQFARELGATINLDAYEDVAFLQEVASIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169 V + D ++ G + I++ + V H + Sbjct: 139 RYNPGGVFELGTDIMDSP-EEAKFGMTKEQLIQAFKDLKNLGVKKFGIHALLASNTVTNH 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + +++I+L GG+ + + + + + +I Sbjct: 198 YYPELARQLFELAVEVVAETNVDLDFINLSGGVGVPYRPEEKANDILAIGQGVRRVYEEI 257 Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G ++ L T VL + + + VD+S + + Sbjct: 258 LTPAGLGKVKIFTELGRFMLAPHGLLVTKVLHKKKTYRTYIGVDASAVNLLRPAMYGAYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + V G C D F IGD + D + + +N Sbjct: 318 HITNMDYPDGPTEIVDVVGSLCENNDKFAIQRELPITNIGDTLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + DG ++ IR DY+ L Sbjct: 378 AKLRSAEILLEEDGGVRMIRRAEIPEDYFATL 409 >gi|326800566|ref|YP_004318385.1| diaminopimelate decarboxylase [Sphingobacterium sp. 21] gi|326551330|gb|ADZ79715.1| diaminopimelate decarboxylase [Sphingobacterium sp. 21] Length = 392 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 72/368 (19%), Positives = 126/368 (34%), Gaps = 34/368 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP++ D Q L +D AL + ALK + + + G S E Sbjct: 14 ETPFFYYDLQLLQATIDNALTEADKYKFHIHYALKANFNERVLQIIQESGIGADCVSGNE 73 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQK--LHKK 117 V+ E F + + K + + D +V +L D A+K K Sbjct: 74 VLKAVETGFSPDKIVFAGVGKADKEIIAALHHDIFAFNVESVQELCVIGDLAKKEGKVAK 133 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN- 169 + LRINP+V ++ G K + + + GL FH + Sbjct: 134 VALRINPNVDAKTHKYITTGLDENKFGIKTWELNECLDVIRNFDSLELIGLHFHVGSQVV 193 Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF 221 F + F +++ +++GGG+ K + + +F Sbjct: 194 DLNVFKSLCVKVNEFNNWFDERGYRLKVLNVGGGLGVNYTDPDGEPIVDFKRYFEIFDQF 253 Query: 222 SEKY-SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA 279 E+ +++ E G A+V + +L + VL + IK ++ D+ + + LYQ Sbjct: 254 LERKGEQEVHFELGRALVAQSGSLISKVLYVKNGIKKHFLILDAGMTELMRPA-LYQAYH 312 Query: 280 TIYP----------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 I G V G C + D FG+ K GD I+ Y Sbjct: 313 KIEHLSAKQLSEETRDGSVNYDVVGPICESTDCFGKEVELPESKRGDLIAIRTTGAYGEV 372 Query: 330 RKNWFNGI 337 + +N Sbjct: 373 MASKYNLR 380 >gi|257877302|ref|ZP_05656955.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC20] gi|257811468|gb|EEV40288.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC20] Length = 438 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 66/400 (16%), Positives = 123/400 (30%), Gaps = 37/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ ++ + + + A K F M + S Sbjct: 25 GTPLYVYSVSEIREECQKIQAQFLTRYSKTRAAYAAKAFCTTAMLQVIKSEGLSLDVVSG 84 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F E +N K + A+ II + + ++ + Q+ Sbjct: 85 GELYTAIQADFPAEHIEFNGNNKSIEELAAALDYGVGRIIVDGIQEVGLIRALCQEKQVV 144 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166 KI LRI P VS S + S+ G ++ I++ + GL FH Sbjct: 145 AKILLRITPEVSVSTHQFISTGQKDSKFGIPLDEEILFPLVEEVIQAPELDFYGLHFHVG 204 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGI-----------HFTDKDYPV 211 + A + + ++ ++GGG ++ PV Sbjct: 205 SQLSDNRSHLAAVDAALALVQTIHERFDYWIKELNVGGGFGVRYTDADIRQPYSYFLDPV 264 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 + + I +EPG +IV T+ I +D + ++ Sbjct: 265 MEKIDAFYAQHQSERPTIVIEPGRSIVAEAGISLHTIGSIKTLPGIRTYASIDGGMTDNI 324 Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L I N + G++C + DI + PV+ GD + Sbjct: 325 RPGLYQATYTGILANRASEAATQKITISGKACESTDILVKDLALPPVETGDLFATFATGA 384 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N + +P + A++ SY N Sbjct: 385 YGYSMASSYNNLQIPAVVFVENGQAELAVKRQSYEQMLQN 424 >gi|330011204|ref|ZP_08307023.1| diaminopimelate decarboxylase [Klebsiella sp. MS 92-3] gi|328534258|gb|EGF60876.1| diaminopimelate decarboxylase [Klebsiella sp. MS 92-3] Length = 420 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 49/398 (12%), Positives = 116/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAQLSQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 E + D + + ++ L++ + + ++ Sbjct: 82 RALAAGYDPQQNPEDIVFTADLIDDATLDRVKALQIPVNAGSIDMLSQLGEVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G + + + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLPAALEVMRRYQLQLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222 + + ++ F ++ IS GGG+ Y + + + Sbjct: 199 GHLEQVCGAMVRQVVDFGQDLQAISAGGGLSIPYREGEEAIDTAHYYGLWNRAREQIAAH 258 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V++ +EPG +V + L + V + ++ V++D+ + + Sbjct: 259 LGHPVKLEIEPGRFLVAESGVLVSQVRSVKEMGSRHFVLIDAGFNDLMRPAMYGSYHHIT 318 Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E GD + D Y Sbjct: 319 ALAGDGRDLSAAPQVETVVAGPLCESGDVFTQQEGGKVETRLLPAGAPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDGGKARLIRRRQTIQELLA 416 >gi|226307348|ref|YP_002767308.1| diaminopimelate decarboxylase [Rhodococcus erythropolis PR4] gi|226186465|dbj|BAH34569.1| probable diaminopimelate decarboxylase [Rhodococcus erythropolis PR4] Length = 447 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 114/397 (28%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + + T I +++ A K M ++ G S E Sbjct: 50 GTPTYVVDEADVRHRCRTYREIF--PDSEIVYAGKALMIRAMATWVSDEGLGVDVCSAGE 107 Query: 63 VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + K AV + I+ ++ S+ + +K+ Sbjct: 108 LAVALAAGVDPHRIILHGNAKSVSELRAAVNAGVGRIVLDSPSEAVRLASVC-THRQKVL 166 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC--KDK-------IESEIKNVNGLMFHNNCENK 170 +R+ P + + G ++ + + GL H + Sbjct: 167 IRVTPGIDIHGHKAVSTGILDQKFGLPAFSEELERTVSVVANAAHLQLIGLHCHLGSQIT 226 Query: 171 SFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 F M+ ++ + + LGGG + RL ++ Sbjct: 227 DPELFRPAIETMIAQMDDIRRTHRIILTELDLGGGHGIAYMPGDAQLDLTRLAHVIDETL 286 Query: 226 ----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSVEAHV 269 +I LEPG AI V +I + + + Sbjct: 287 DDACTRNRFPRPEIVLEPGRAIAARAGVTLYRVQNIKSISGGRTFVSVDGGMSDNPRVSL 346 Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNI 328 D E + + V GR C +GD + GD ++ Y+ Sbjct: 347 YDSHYDVELVNRHSSAPLQEVTVAGRHCESGDEIAVGARLPADLHEGDLLAVPCTGAYHH 406 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + IR S ND Sbjct: 407 SMASTYNSVGRPPVVAVLGGIARPLIRRESINDLLAR 443 >gi|194477239|ref|YP_002049418.1| diaminopimelate decarboxylase [Paulinella chromatophora] gi|171192246|gb|ACB43208.1| diaminopimelate decarboxylase [Paulinella chromatophora] Length = 453 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 53/395 (13%), Positives = 109/395 (27%), Gaps = 34/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++D+ L K L A K ++ + + + G S Sbjct: 46 GTPLYILDEITLRATCKAYFNALKKFYSALSLPLYASKANSSKLLTALVAEEGFGIDVVS 105 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKA--QKLH 115 E++ + K + A+ + TI+ + L + +KL Sbjct: 106 GGELLTALAGKMPASRILLHGNNKSWQELALALDHGATIVVDNSHDLQIISELVGNRKLP 165 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + LR P++ + S+ G + + + GL H + Sbjct: 166 VSLMLRFTPNIECHTHEYIRTGKLDSKFGFGPEQIESIFKKLLACSWARITGLHAHIGSQ 225 Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224 ++ + I +++GGG+ Q + K Sbjct: 226 IFELEPHRDLVGIMADAIQLGRSMGHPIVDLNVGGGLGICYVSSDDPPSIQNWVKNIAKA 285 Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 ++ EPG ++V T+ +D + + Sbjct: 286 VTVSCERRKLSLPRLICEPGRSVVATAGVTLYTLGSQKHIPGMPSYLSIDGGMSDNPRPI 345 Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 A ++ G+ C +GD+ + + K GD + YNI Sbjct: 346 TYQSIYTAFLADYPTQKVIQEVILVGKHCESGDVLLKNLYLPKSKSGDILVVFATGAYNI 405 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + +N + P + D Sbjct: 406 SMSSNYNRVPRPASVIVFNGHADLIQLREQPEDLL 440 >gi|317049365|ref|YP_004117013.1| diaminopimelate decarboxylase [Pantoea sp. At-9b] gi|316950982|gb|ADU70457.1| diaminopimelate decarboxylase [Pantoea sp. At-9b] Length = 417 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 59/396 (14%), Positives = 117/396 (29%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D + + + A K + + + S SL E+ Sbjct: 27 PFWAYDASVIQQRIAQLNQFDV-----VRFAQKACSNIHILRLMRAAGVKVDSVSLGEIE 81 Query: 65 LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGL 120 GGE + D A ++ + ++ A + L Sbjct: 82 RALAAGYQPGGEDIVFTADVLDQPTLARIAQ--LKVPVNAGSVDMLHQLGAVSAGHAVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 RINP + + S+ G D I+ + GL H + Sbjct: 140 RINPGFGHGHSQKTNTGGENSKHGIWHSDLPQALAAIQQHGLRLVGLHMHIGSGVD-YGH 198 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224 + + + F +E IS GGG+ Y R + + Sbjct: 199 LQQVCDAMVDQVVSFGQDLEAISAGGGLSIPYRVGEEAIDTDHYYGLWNGARERIAAHLG 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++V++ +EPG +V + L + V + ++ V+VD+ + + Sbjct: 259 HAVKLEIEPGRFLVAESGVLVSQVRAVKEMGSRHFVLVDAGFSDLMRPAMYGSYHHISLL 318 Query: 284 NTGPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 T + G C +GD+F E ++GD + F D Y Sbjct: 319 PADGRTVNASQTVESVIAGPLCESGDVFTQLEGGKVETRALPAAQVGDYLVFHDTGAYGA 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 SMSSNYNSRPLIPEVLFENGTAREIRRAQTIQELLA 414 >gi|162148745|ref|YP_001603206.1| diaminopimelate decarboxylase [Gluconacetobacter diazotrophicus PAl 5] gi|161787322|emb|CAP56916.1| putative diaminopimelate decarboxylase [Gluconacetobacter diazotrophicus PAl 5] Length = 491 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 49/387 (12%), Positives = 109/387 (28%), Gaps = 28/387 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP +++ L ++AG + A+K + L G S Sbjct: 86 VGTPTWVMGAGTLRARYRRLAGALRDAGLAPSIHFAVKANDHLAVLRVLAAEGAGADVVS 145 Query: 60 LYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ ++ +D AV I + +L+ D A + Sbjct: 146 GGELRRARAAGIPAAGIVFSGVGKSRDELHLAVTEGIAHIAVESAEELDVVSDVAVAAGR 205 Query: 117 KIG--LRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKNVNGLMFHNNCEN 169 LR+NP V ++ G + + ++ L F + + Sbjct: 206 TARITLRVNPDVDAGTHEKITTGLSTNKFGIAYARAADLYARAAALPGLHPLGFSVHIGS 265 Query: 170 KSFLCFSAMLKNIE-----KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEF 221 + + + + GGG+ +D ++ Sbjct: 266 QIVAMGPYRAAFARVADLVRAVRARGLSVGLVDCGGGLGIRYRDEVEGAPMALAGAIRAE 325 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI---SENIKNLVIVDSSVEAHVPDYLLYQES 278 V++ +EPG + L + V+ + + +I+D+++ L Sbjct: 326 LGDLDVRLAIEPGRWLAGPAGVLLSRVILRKAGQDGLPPFLILDAAMNDLARPSLYDSWH 385 Query: 279 ATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + + + V G C + D F + G ++ D Y + + Sbjct: 386 GILPLSARDAVQPVESVNVVGPVCESADSFATGRMLPRMGDGAAVALLDTGAYGMVMSST 445 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYN 360 +NG + + + Sbjct: 446 YNGRPLAAQVLVDGGRWSVIRARQPVE 472 >gi|62181522|ref|YP_217939.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224584802|ref|YP_002638600.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62129155|gb|AAX66858.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224469329|gb|ACN47159.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322716004|gb|EFZ07575.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 420 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAIMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|322375830|ref|ZP_08050341.1| protein TabA [Streptococcus sp. C300] gi|321279098|gb|EFX56140.1| protein TabA [Streptococcus sp. C300] Length = 418 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G ++ D E TI + + + A Sbjct: 79 ELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAVIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 ATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 +P+ V G C D F +IGD + D + + +N Sbjct: 318 HITNLTHPDEPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + +G + IR DY+ L Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409 >gi|58617276|ref|YP_196475.1| diaminopimelate decarboxylase [Ehrlichia ruminantium str. Gardel] gi|58416888|emb|CAI28001.1| Diaminopimelate decarboxylase [Ehrlichia ruminantium str. Gardel] Length = 424 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 70/384 (18%), Positives = 129/384 (33%), Gaps = 22/384 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y + NN N + A+K + + L+ G + S Sbjct: 34 IGTPVYCYSLNAIKNNYIQFKENLPN-NSIICYAVKSNSNLSILSLLSSLGSGADAVSEG 92 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHK-- 116 E+ ++ K + + + + ++ +L + + Sbjct: 93 EIRRAITAGISPNKIVFSGVGKTEQEISFALDNRILQLNVESIEELQLINKISYHKNIIA 152 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIESEIKNVN--GLMFHNNCEN-- 169 + +RINP+++ + ++ G S + N+ G+ H + Sbjct: 153 PVSIRINPNINANTNDKITTGLKVNKFGIPEESLDQVFNSSLTNIKIIGISVHIGSQIAN 212 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFSEK 224 F +K I K F I + +GGG+ K+ + LK EK Sbjct: 213 LGIFQNTIDKVKRIVKIFEQHNIHILRVDMGGGLGIPYKNSDIFPTIQEYTNLLKNNFEK 272 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280 S I EPG AIV NT L VL S KN +++D+ + + L E Sbjct: 273 ESYNIICEPGRAIVGNTGILLAKVLYHKSNYEKNHLVLDTGMNDLIRPALYNAEHTIIPA 332 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + + + G C + D F ++ V + ++ V Y + + +N + Sbjct: 333 VVSSKSHLSFDIVGPICESDDTFAHSYWINNVDNNEIVAICTVGAYGSSMSSNYNSRPLV 392 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + N D +YND Sbjct: 393 PEVIVNKDNYHIIRHRQTYNDMLK 416 >gi|261822862|ref|YP_003260968.1| diaminopimelate decarboxylase [Pectobacterium wasabiae WPP163] gi|261606875|gb|ACX89361.1| diaminopimelate decarboxylase [Pectobacterium wasabiae WPP163] Length = 420 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 59/392 (15%), Positives = 120/392 (30%), Gaps = 46/392 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D Q ++N + + A K + + + ++ S SL E+ Sbjct: 27 PVWAYDAQTIVNRIAQLRQFD-----TIRFAQKACSNTHILRLMREHGVKVDSVSLGEIE 81 Query: 65 LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 F + D ++ + + +V L + Q + Sbjct: 82 RALVAGFVPGTDAHEIVFTADLLDRPTLQRVAELNIPVNAGSVDMLEQLGQ--QSPGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALEHIQRYQLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + + ++ IE IS GGG+ + Y R K + Sbjct: 199 GHLEQVCEAMVRQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHYYGLWNAAREKIAAH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V + +EPG +V + L V I ++ V+VD+ + + Sbjct: 259 LGHPVTLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDAGFNDLMRPAMYGSYHHVS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +++ G C +GD+F E ++GD + F D Y Sbjct: 319 LLSGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFPLPEAQVGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 + + +N + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410 >gi|238787278|ref|ZP_04631077.1| Diaminopimelate decarboxylase [Yersinia frederiksenii ATCC 33641] gi|238724540|gb|EEQ16181.1| Diaminopimelate decarboxylase [Yersinia frederiksenii ATCC 33641] Length = 420 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 112/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + ++ + A K + + + S SL E+ Sbjct: 27 PVWAYDGDIITQKINQLRSFDV-----IRFAQKACSNIHILGLMRNQGVKVDSVSLGEIE 81 Query: 65 LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D ++ + ++ L + A + Sbjct: 82 RALQAGFQPGQEPAEIVFTADLLDQATLLRVTELHIPVNAGSIDMLEQLGQHA--PGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G +D IE + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPLAIKKIEQYGLTLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + ++ I IS GGG+ + + + Sbjct: 199 QHLEQVCDAMVQQVIDLGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNSARERIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V + +EPG ++ + L V + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLMAESGVLIAQVRAVKDMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+F E KIGD + F D Y Sbjct: 319 LLPADGRSLADEPLIETVVAGPLCESGDVFTQEAGGGLETRALPMAKIGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416 >gi|222081791|ref|YP_002541156.1| diaminopimelate decarboxylase [Agrobacterium radiobacter K84] gi|221726470|gb|ACM29559.1| diaminopimelate decarboxylase protein [Agrobacterium radiobacter K84] Length = 414 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 55/396 (13%), Positives = 119/396 (30%), Gaps = 48/396 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + + A K + + + + + SL E Sbjct: 17 GTPLWVYDAEAIRRRIKQL-SAFDV----IRFAQKACSNIHILREMRKAGVFVDAVSLGE 71 Query: 63 VMLG-HEKF------GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL 114 + + + D I + + ++ L++ +++ Sbjct: 72 IERAVRAGYAVGSTSDAAEIVFTADVFDRAILDRVVADRIEVNIGSIDMLHQLGERS--P 129 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCE 168 ++ LR+NP + + S+ G + + + + GL H Sbjct: 130 GHRVWLRVNPGFGHGHSNKTNTGGENSKHGIWFEQLHEAVSAVRAHSLTLVGLHMHIGSG 189 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----------DYPVKDFCQRL 218 + + + T IE IS GGG+ K + + D +R Sbjct: 190 VD-YGHLQRVCGAMVDFCRDLGTDIEAISAGGGLSVPYKEGEEEIDPTHYFSLWDEARRQ 248 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQE 277 E ++ V++ +EPG + ++ L V + +VD+ + Sbjct: 249 VEAHVQHPVRLEIEPGRFLTADSGVLLAEVRAVKTMGQNRFTLVDAGFSDLARPAMYGSY 308 Query: 278 SAT-IYPNTGPY-------TAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFED 322 + P P+ +V G C +GD+F E +GD + F Sbjct: 309 HHISVIPGPAPHDRSAVTLPTVVAGPLCESGDVFTQTEFGTVEKRDLPETHVGDFLVFHG 368 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 Y + +N + + R + Sbjct: 369 TGAYGATMSSNYNSRLYAPEVLLDEGKHRLIRRRQT 404 >gi|225156512|ref|ZP_03724846.1| diaminopimelate decarboxylase [Opitutaceae bacterium TAV2] gi|224802840|gb|EEG21088.1| diaminopimelate decarboxylase [Opitutaceae bacterium TAV2] Length = 499 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 52/424 (12%), Positives = 106/424 (25%), Gaps = 60/424 (14%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + TP Y+ + +N +++ A+K ++ + S Sbjct: 67 LYGTPTYVYSAATMTDNYTRLARSLGGLDLQICYAMKANSSLAILRHFANLGAAFDLVSG 126 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKAQKL--- 114 E+ + + K + F + ++ + A KL Sbjct: 127 GEIRRVLAAGADVKRSVFAGVGKTEAEIKLALENGIFAFHVESEPEIARINHVAGKLLSS 186 Query: 115 -----HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLM 162 I +RINP V + ++ G K + + G+ Sbjct: 187 GRITGKAPIAIRINPDVDAHTHAKITTGKADNKFGIPLKHAAAAYETAARYPHIEIKGVQ 246 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 H + S F + + T+ G + + Sbjct: 247 MHIGSQLTSVKPFVEAVAKVAPFVADLKTRYGITYFSIGGGIGIIYKDALASGAKAWWDA 306 Query: 223 EKYSVQI---------------------------------YLEPGEAIVTNTTTLNTTVL 249 + + LEPG +V N L T V Sbjct: 307 QPADQRPLTPEAYGAALTPLLQPLASATGGGGGTGTGLKILLEPGRFLVGNAGVLLTRVE 366 Query: 250 DISENIKN-----LVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAG 300 + ++VD+++ V + + A V G C +G Sbjct: 367 YLKRGHDRARDKSFLVVDAAMNDLVRPAMYDSYHEILPLQRDTARPALVADVVGPICESG 426 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 D F + + + G+ ++F Y +N M + N ++ Sbjct: 427 DCFAKDRSLQELGEGEHLAFMSAGAYGYTMAGRYNSRPMAAEVLVNQGTFELINARETFE 486 Query: 361 DYYN 364 Sbjct: 487 QQIA 490 >gi|282877924|ref|ZP_06286733.1| diaminopimelate decarboxylase [Prevotella buccalis ATCC 35310] gi|281299925|gb|EFA92285.1| diaminopimelate decarboxylase [Prevotella buccalis ATCC 35310] Length = 385 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 126/368 (34%), Gaps = 26/368 (7%) Query: 3 KTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +TP+Y D L L I + ++ A+K A + + ++Q S Sbjct: 14 QTPFYYYDTALLKETLQAIKTEIEQYERFQVHYAVKANANAKLLNIISQAGLEADCVSGG 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E++ F Y K A+ + + ++++L + A+K K Sbjct: 74 EILAAIDAGFSPNKIVYAGVGKSDWEIALGIDQEILCFNVESIAELEVINEIAEKKGKIA 133 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169 LRINP V ++ G + + + GL FH + Sbjct: 134 RIALRINPDVEAHTHANITTGLAENKFGIALCEMKTALEACLRMKNVRFTGLHFHIGSQI 193 Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD------FCQRLKE 220 + F+ + +++E +E I++GGG+ + + + Q + Sbjct: 194 LDMRDFVSLCDRINQLQEELHQHHVHVESINVGGGLGVNYEHPDQQPIPDFKAYFQTYAQ 253 Query: 221 FSEKYSVQI-YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES 278 + Y Q + E G +IV +L T VL + + ++ + D+ + + L Sbjct: 254 HLKLYPHQTLHFELGRSIVAQCGSLITKVLYVKQGVRKKFCIVDAGMTDFIRPALYQSRH 313 Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + N T V G C + D+F + D ++ Y + +N Sbjct: 314 QIENLSSNDAHETYDVVGPICESSDVFAKAIDLNQCHRCDLLAIRSAGAYGEVMASQYNC 373 Query: 337 INMPTIAV 344 +P + Sbjct: 374 RKLPKGYL 381 >gi|229494021|ref|ZP_04387790.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121] gi|229319090|gb|EEN84942.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121] Length = 447 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 114/397 (28%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + + T I +++ A K M ++ G S E Sbjct: 50 GTPTYVVDEADVRHRCRTYREIF--PDSEIVYAGKALMIRAMATWVSDEGLGVDVCSAGE 107 Query: 63 VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + K AV + I+ ++ S+ + +K+ Sbjct: 108 LAVALAAGVDPNRIILHGNAKSVAELRAAVNAGVGRIVLDSPSEAVRLASVC-THRQKVL 166 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC--KDKIE-------SEIKNVNGLMFHNNCENK 170 +R+ P + + G ++ + + GL H + Sbjct: 167 VRVTPGIDIHGHKAVSTGIVDQKFGLPAFSEELEHTVSVVANATHLQLIGLHCHLGSQIT 226 Query: 171 SFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 F M+ ++ + + LGGG + RL ++ Sbjct: 227 DPELFRPAIETMIAQMDDIRRTHRIILTELDLGGGHGIAYVPGDAQLDLTRLAHVIDETL 286 Query: 226 ----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSVEAHV 269 +I LEPG AI V +I + + + Sbjct: 287 DDACTRNRFPRPEIVLEPGRAIAARAGVTLYRVQNIKSISGGRTFVSVDGGMSDNPRVSL 346 Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNI 328 D E + + V GR C +GD + GD ++ Y+ Sbjct: 347 YDSHYDVELVNRHSSAPLQEVTVAGRHCESGDEIAVGARLPADLHEGDLLAVPCTGAYHH 406 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + IR S ND Sbjct: 407 SMASTYNSVGRPPVVAVLGGIARPLIRRESINDLLAR 443 >gi|22127060|ref|NP_670483.1| diaminopimelate decarboxylase [Yersinia pestis KIM 10] gi|45442627|ref|NP_994166.1| diaminopimelate decarboxylase [Yersinia pestis biovar Microtus str. 91001] gi|108806470|ref|YP_650386.1| diaminopimelate decarboxylase [Yersinia pestis Antiqua] gi|108813160|ref|YP_648927.1| diaminopimelate decarboxylase [Yersinia pestis Nepal516] gi|145598995|ref|YP_001163071.1| diaminopimelate decarboxylase [Yersinia pestis Pestoides F] gi|150260186|ref|ZP_01916914.1| diaminopimelate decarboxylase [Yersinia pestis CA88-4125] gi|153949493|ref|YP_001399956.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP 31758] gi|162418960|ref|YP_001607600.1| diaminopimelate decarboxylase [Yersinia pestis Angola] gi|165925080|ref|ZP_02220912.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165937375|ref|ZP_02225939.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis str. IP275] gi|166010227|ref|ZP_02231125.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166212689|ref|ZP_02238724.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str. B42003004] gi|167400100|ref|ZP_02305618.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419377|ref|ZP_02311130.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425309|ref|ZP_02317062.1| diaminopimelate decarboxylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466654|ref|ZP_02331358.1| diaminopimelate decarboxylase [Yersinia pestis FV-1] gi|218927976|ref|YP_002345851.1| diaminopimelate decarboxylase [Yersinia pestis CO92] gi|229837708|ref|ZP_04457868.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis Pestoides A] gi|229840698|ref|ZP_04460857.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842746|ref|ZP_04462900.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis biovar Orientalis str. India 195] gi|229903606|ref|ZP_04518719.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis Nepal516] gi|270487386|ref|ZP_06204460.1| diaminopimelate decarboxylase [Yersinia pestis KIM D27] gi|294503019|ref|YP_003567081.1| diaminopimelate decarboxylase [Yersinia pestis Z176003] gi|21960112|gb|AAM86734.1|AE013919_7 diaminopimelate decarboxylase [Yersinia pestis KIM 10] gi|45437492|gb|AAS63043.1| diaminopimelate decarboxylase [Yersinia pestis biovar Microtus str. 91001] gi|108776808|gb|ABG19327.1| diaminopimelate decarboxylase [Yersinia pestis Nepal516] gi|108778383|gb|ABG12441.1| diaminopimelate decarboxylase [Yersinia pestis Antiqua] gi|115346587|emb|CAL19468.1| diaminopimelate decarboxylase [Yersinia pestis CO92] gi|145210691|gb|ABP40098.1| diaminopimelate decarboxylase [Yersinia pestis Pestoides F] gi|149289594|gb|EDM39671.1| diaminopimelate decarboxylase [Yersinia pestis CA88-4125] gi|152960988|gb|ABS48449.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP 31758] gi|162351775|gb|ABX85723.1| diaminopimelate decarboxylase [Yersinia pestis Angola] gi|165914849|gb|EDR33462.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis str. IP275] gi|165923280|gb|EDR40431.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990713|gb|EDR43014.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205981|gb|EDR50461.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str. B42003004] gi|166963371|gb|EDR59392.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050808|gb|EDR62216.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055709|gb|EDR65493.1| diaminopimelate decarboxylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679376|gb|EEO75479.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis Nepal516] gi|229690226|gb|EEO82281.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis biovar Orientalis str. India 195] gi|229697064|gb|EEO87111.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704085|gb|EEO91097.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis Pestoides A] gi|262361055|gb|ACY57776.1| diaminopimelate decarboxylase [Yersinia pestis D106004] gi|262364999|gb|ACY61556.1| diaminopimelate decarboxylase [Yersinia pestis D182038] gi|270335890|gb|EFA46667.1| diaminopimelate decarboxylase [Yersinia pestis KIM D27] gi|294353478|gb|ADE63819.1| diaminopimelate decarboxylase [Yersinia pestis Z176003] gi|320014133|gb|ADV97704.1| diaminopimelate decarboxylase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 420 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 52/398 (13%), Positives = 114/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + ++ + + A K + + + + S SL E+ Sbjct: 27 PVWAYDGDIIAERINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + D ++ + + ++ L++ +A + Sbjct: 82 RALHAGYQPGQEPAEIVFTADLLDQATLLRVTELNIPVNAGSIDMLDQLGQQA--PGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G ++ IE + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEELPRALKKIEHYGLTLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + ++ I IS GGG+ + + Sbjct: 199 QHLEQVCDAMVQQVITLGHDISAISAGGGLSIPYQFGDDVIDTEHYYGLWNSARERIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V + +EPG +V + L V + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLIAQVRAVKDMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 282 YPNTGPYT--------AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E IGD + F D Y Sbjct: 319 LLPADGRDLTSAPLIDTVVAGPLCESGDVFTQQEGGGVETLALPAAVIGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + + Sbjct: 379 GASMSSNYNSRPLLPEVLFEKGQPRLIRRRQTIEELID 416 >gi|168261830|ref|ZP_02683803.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349003|gb|EDZ35634.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 420 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 113/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRALGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDLDAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|229828510|ref|ZP_04454579.1| hypothetical protein GCWU000342_00573 [Shuttleworthia satelles DSM 14600] gi|229793104|gb|EEP29218.1| hypothetical protein GCWU000342_00573 [Shuttleworthia satelles DSM 14600] Length = 427 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 119/391 (30%), Gaps = 29/391 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+++ D++ + N G + A+K + L +Y GT SSL Sbjct: 20 PTPFHVYDEKGIRQKARDVREAFAWNPGFREYFAVKATPNPFLIKILQEYGCGTDCSSLS 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML G + E I F+ +S ++ ++ + L + Sbjct: 80 ELMLSDAIGLKGHEIMFTSNDTPAEEFRYAAQIGAIINFDDISHIDFYEREVGPLPDTVC 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCEN 169 R NP Y N S+ G IE+ K V H + Sbjct: 140 CRYNPGGIYELANGIMDNPGDSKYGMTHAQIIEAYRILKEKRVKHFGIHAFLCSNTVTND 199 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + + ++I+L GG+ + + + + + Sbjct: 200 YYPTLARTLFTLVAEISKELGIRFDFINLSGGVGIPYSPDQTPNDIMAIGQGVHRVYDEV 259 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 IY E G ++ L T + KN + VD+ + + Sbjct: 260 LVPAGMDQIAIYTEMGRFMMGPHGGLVTRAIHAKHTYKNYIGVDACAANLMRPAMYGAYH 319 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F ++ GD + D + + + Sbjct: 320 HITVLGKEDAPLTEVYDVTGALCENNDKFAIDRKLPAIENGDLLFIHDTGAHGFSMGYNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 N + + DG+ + IR + DY+ Sbjct: 380 NARLWSSEILLKEDGSFELIRRAQTPRDYFA 410 >gi|332295006|ref|YP_004436929.1| diaminopimelate decarboxylase [Thermodesulfobium narugense DSM 14796] gi|332178109|gb|AEE13798.1| diaminopimelate decarboxylase [Thermodesulfobium narugense DSM 14796] Length = 427 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 58/394 (14%), Positives = 127/394 (32%), Gaps = 33/394 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ Q + + +++ K ++ A K G L + S Sbjct: 31 TPLYIMCAQTVKSRVESFKESFKKYLPFESRIAFAGKSLCVTGFLKKLKELDMWLDVVSG 90 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F + ++ K E SN I+ + S++ K ++ ++K Sbjct: 91 GELYTAIKAGFDTKRIYFHGNNKSFEELEFAIRSNVGYIVVDGFSEIEKIRELSKKYSYI 150 Query: 118 IG-LRINPSVSYSKFILADPNRPFSRLGEKC--------KDKIESEIKNVNGLMFHNNCE 168 +R++P + + S+ G K+ + + G+ H + Sbjct: 151 PCMIRVSPGIEAHTHEFIKTGKIDSKFGFPIGEDAIKAVKELSLIDSVSFKGIHAHIGSQ 210 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR-------- 217 ++ ++ + + +E I+ GGG + Sbjct: 211 IFDSNPYIELVNVMFDFANKLSDEGFSLENINFGGGFGIVYTKEDHPLSIEEFIKDISFE 270 Query: 218 LKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDY 272 + + +KY+++ +EPG +I + V I + L V + + Sbjct: 271 INKNMKKYNMKDISFTVEPGRSIAGPSGITVYRVGSIKKIEGFLPYVAVDGGMADNPRYA 330 Query: 273 LLYQESATIYPNTGP--YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + + GR C +GD+ E + GD + YN + Sbjct: 331 LYRAKYHAELDEKTEAFQEVKIVGRFCESGDMLIERIMLPEISTGDLLIVFATGAYNYSM 390 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N P + + +R +Y+D + Sbjct: 391 ASNYNRFGRPAMVMVEDGKDTLLVRRETYDDIVS 424 >gi|257077100|ref|ZP_05571461.1| diaminopimelate decarboxylase [Ferroplasma acidarmanus fer1] Length = 421 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 58/385 (15%), Positives = 114/385 (29%), Gaps = 30/385 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP + + ++ N+ +K+ A+K + + + G +++ E Sbjct: 31 GTPVIVYNMARVRENIRRIRDAFNGINIKVHFAVKSNYNPYIVSQIIKEGTGIDAANYNE 90 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 V L G + I F+ Q+ K L + + Sbjct: 91 VKLAIMCGLGSRDIIATPNNLSGTELRTIKEEGVAINFDHEGQMGLLKG---SLPETVSF 147 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLC 174 RINP + +F + G D I + + G+ Sbjct: 148 RINPGIGKGEFPGITTGGKNVKFGISVDDAISAYSAAIKAGVKHFGIHMMTGSNVLEPEF 207 Query: 175 FSA----MLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE--- 223 F+ K E ++I +GGG + + + Sbjct: 208 FNESSGLFFKIAETISDRTGIDFDFIDIGGGFGVPYTSDEHALDIGKTAGYISDNFRASN 267 Query: 224 ----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 ++ +EPG IV ++ L + V I + + L+ +D+S+ + L Sbjct: 268 NRGYFKDSRLIIEPGRYIVADSAILLSKVTSIKHSDRELIGIDASMNTLIRIPLYGARHG 327 Query: 280 TIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + G T + G+ C D + +GD + D Y + + +N Sbjct: 328 ILLSGHGENTSSSRFDIVGQVCENTDYIAKDISIPEPAVGDIVVIADAGAYVASMASNYN 387 Query: 336 GINMPTIAVKNVDGTIKAIREFSYN 360 ++ P V D I Sbjct: 388 LLSRPAELVLEGDREILTKGHDGLE 412 >gi|20093921|ref|NP_613768.1| diaminopimelate decarboxylase [Methanopyrus kandleri AV19] gi|19886865|gb|AAM01698.1| Diaminopimelate decarboxylase [Methanopyrus kandleri AV19] Length = 405 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 69/371 (18%), Positives = 124/371 (33%), Gaps = 26/371 (7%) Query: 16 NNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGE 73 V + A+K + + + SL+E+ + Sbjct: 28 KAAREYQEAFSWFPDRVYVCYAMKANFNPYLVEHIVDETRAADVVSLWEMKVAVNAGAET 87 Query: 74 THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG--LRINPSVSYSKF 131 A EI A + I ++ + + + A+ ++ LR+NP VS Sbjct: 88 VVVNGNAKSSDEIRAAVERSWVINVDSFEEFQRIEKIARHEGERALVALRVNPKVSPDTH 147 Query: 132 ILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+ G + C+ IESE GL +H + FS L+++ Sbjct: 148 SHIATAVEGSKFGVELEIAERVCRRMIESEWVEFLGLHYHIGSQITDLRPFSEALRSVRT 207 Query: 185 EFGHFIT--QIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS-----VQIYLEP 233 +I ++++GGG+ + D + L+E ++ +YLEP Sbjct: 208 FLEDTGLIEEISYLNIGGGLGIRYRRGEEVPSPHDLAEELQEDLKELHSESSGFDLYLEP 267 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---NTGPYTA 290 G +IV L T+V + + V VD+ + A + L + + A Sbjct: 268 GRSIVGEAGILVTSVRQVKRGRRRWVFVDTGMNALIRPALYDAYHEVVVHGGDYSATEKA 327 Query: 291 MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 V G C +GD+ E + GD + F Y + + +N +P V Sbjct: 328 SVAGPLCESGDVLAEDRELPIDISEGDLVVFLSAGAYCESMASNYNCYPIPGSVVVRNGE 387 Query: 350 TIKAIREFSYN 360 R Y Sbjct: 388 ITGVRRVQDYE 398 >gi|304407412|ref|ZP_07389065.1| diaminopimelate decarboxylase [Paenibacillus curdlanolyticus YK9] gi|304343853|gb|EFM09694.1| diaminopimelate decarboxylase [Paenibacillus curdlanolyticus YK9] Length = 445 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 63/404 (15%), Positives = 122/404 (30%), Gaps = 43/404 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID+ + + + V + A K F M + + + S Sbjct: 30 GTPLYVIDEAAVRQRCRDYVQSFRAHWNHVDVAYASKAFMIGQMVNLVVEEGMSLDVVSE 89 Query: 61 YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ L ++ Y +D AV S T++ + + +++ + +AQ K Sbjct: 90 GELKLALWAGAPASRITFHGNYKTQDEIRLAVASGVRTLVIDCLEEIDAIEQEAQSQGKL 149 Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 +R+N +++ S+ G D ++S + GL FH Sbjct: 150 QAVDIRVNLAINVYSNPKFTTGHMESKFGLSIFDHTAMRAIAAILQSSSLMLRGLHFHLG 209 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKD----FCQRL 218 + + L+ + + I++GGG+ Y + + Sbjct: 210 SQIQEVKFHQQALERLGAFIQAVTDAHGWKPSSITMGGGMGVNYSGYARPPTPQEWADGV 269 Query: 219 KEFSEKYSVQIY-------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV-----E 266 ++ + +EPG +++ T TV I + Sbjct: 270 MPVFREHVAPLCEENVIFGIEPGRSVIAEYGTTLYTVGPIKPVPAGQDVRAFISVDGGLS 329 Query: 267 AHVPDYLLYQES------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + + T + GR C D E VK GD ++ Sbjct: 330 DNPRPIMYEAHHNVLLAAHPNAEPTDMLPVRIFGRHCET-DRMIESAPLPEVKTGDLLAV 388 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y N +N P + + AIR + D Sbjct: 389 QCTGAYTYAMSNNYNRFMKPAVVFVQGGKSRLAIRREVFEDSIR 432 >gi|51597359|ref|YP_071550.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP 32953] gi|186896467|ref|YP_001873579.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis PB1/+] gi|51590641|emb|CAH22283.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP 32953] gi|186699493|gb|ACC90122.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis PB1/+] Length = 420 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 52/398 (13%), Positives = 114/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + ++ + + A K + + + + S SL E+ Sbjct: 27 PVWAYDGDIIAERINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + D ++ + + ++ L++ +A + Sbjct: 82 RALHAGYQPGQEPAEIVFTADLLDQATLLRVTELNIPVNAGSIDMLDQLGQQA--PGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G ++ IE + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEELPRALKKIEHYGLTLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + ++ I IS GGG+ + + Sbjct: 199 QHLEQVCDAMVQQVITLGHDISAISAGGGLSIPYQFGDDVIDTEHYYGLWNSARERIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V + +EPG +V + L V + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLIAQVRAVKDMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 282 YPNTGPYT--------AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E IGD + F D Y Sbjct: 319 LLPADGRDLASAPLIDTVVAGPLCESGDVFTQQEGGGVETLALPAAVIGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + + Sbjct: 379 GASMSSNYNSRPLLPEVLFEKGQPRLIRRRQTIEELID 416 >gi|315303911|ref|ZP_07874377.1| diaminopimelate decarboxylase [Listeria ivanovii FSL F6-596] gi|313627721|gb|EFR96388.1| diaminopimelate decarboxylase [Listeria ivanovii FSL F6-596] Length = 386 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 54/385 (14%), Positives = 120/385 (31%), Gaps = 39/385 (10%) Query: 22 LYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFGGETHAYN 78 + GVK + A K F+A ++ + + S E+ F E ++ Sbjct: 1 KKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSGGELYTAIKAGFPAERIHFH 60 Query: 79 VAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRINPSVSYSKFILA 134 K + A+ + + +++ +D + ++K + +R+ P + Sbjct: 61 GNNKSAEEINMALDYGIGCFVLDNYYEISLLEDILIERNEKAAVLIRVTPGIEAHTHDYI 120 Query: 135 DPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + S+ G + S ++ GL H + F + I Sbjct: 121 LTGQDDSKFGFGLTNGQAEAAIKQVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMD 180 Query: 185 EFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKEFSEKYS----------VQI 229 + + + ++LGGG + + +++ E+ +I Sbjct: 181 KLVEWHQTLGFDSQVLNLGGGFGVRYTAEDEPLEPSEYVRQIIEEVRDVASTNAIAIPEI 240 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQESATIYPNTGP 287 ++EPG ++V T V E V + ++ L + + Sbjct: 241 WIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYVAVDGGMSDNIRPALYDAHYDAVLAASPE 300 Query: 288 ----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 T + G+ C +GD+ G+ ++ Y + +N I P + Sbjct: 301 KVPEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVV 360 Query: 344 VKNVDGTIKAIREFSYNDYYNN-LS 367 + +Y + N LS Sbjct: 361 FVENGIDKLIVARETYENLVQNDLS 385 >gi|170023273|ref|YP_001719778.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis YPIII] gi|169749807|gb|ACA67325.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis YPIII] Length = 420 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 52/398 (13%), Positives = 114/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + ++ + + A K + + + + S SL E+ Sbjct: 27 PVWAYDGDIIAERINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + D ++ + + ++ L++ +A + Sbjct: 82 RALHAGYQPGQEPAEIVFTADLLDQATLLRVTELNIPVNAGSIDMLDQLGQQA--PGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G ++ IE + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEELPRALKKIEHYGLTLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + ++ I IS GGG+ + + Sbjct: 199 QHLEQVCDAMVQQVITLGHDISAISAGGGLSIPYQFGDDIIDTEHYYGLWNSARERIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V + +EPG +V + L V + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLIAQVRAVKDMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 282 YPNTGPYT--------AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F E IGD + F D Y Sbjct: 319 LLPADGRDLASAPLIDTVVAGPLCESGDVFTQQEGGGVETLALPAAVIGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + + Sbjct: 379 GASMSSNYNSRPLLPEVLFEKGQPRLIRRRQTIEELID 416 >gi|58579224|ref|YP_197436.1| diaminopimelate decarboxylase [Ehrlichia ruminantium str. Welgevonden] gi|58417850|emb|CAI27054.1| Diaminopimelate decarboxylase [Ehrlichia ruminantium str. Welgevonden] Length = 424 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 70/384 (18%), Positives = 129/384 (33%), Gaps = 22/384 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y + NN N + A+K + + L+ G + S Sbjct: 34 IGTPVYCYSLNAIKNNYIQFKENLPN-NSIICYAVKSNSNLSILSLLSSLGSGADAVSEG 92 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHK-- 116 E+ ++ K + + + + ++ +L + + Sbjct: 93 EIRRAITAGISPNKIVFSGVGKTEQEISFALDNRILQLNVESIEELQLINKISYHKNIIA 152 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIESEIKNVN--GLMFHNNCEN-- 169 + +RINP+++ + ++ G S + N+ G+ H + Sbjct: 153 PVSIRINPNINANTNDKITTGLKVNKFGIPEESLDQVFNSSLTNIKIIGISVHIGSQIAN 212 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFSEK 224 F +K I K F I + +GGG+ K+ + LK EK Sbjct: 213 LGIFQNTIDKVKRIVKIFEQHNIHILRVDMGGGLGIPYKNSDIFPTIQEYTNLLKNNFEK 272 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280 S I EPG AIV NT L VL S KN +++D+ + + L E Sbjct: 273 ESYNIICEPGRAIVGNTGILLAKVLYHKSNYEKNHLVLDTGMNDLIRPALYNAEHTIIPA 332 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + + + G C + D F ++ V + ++ V Y + + +N + Sbjct: 333 VVSSKSHLSFDIVGPICESDDTFAYSYWINNVDNNEIVAICTVGAYGSSMSSNYNSRPLV 392 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + N D +YND Sbjct: 393 PEVIVNQDNYHIIRHRQTYNDMLK 416 >gi|254819272|ref|ZP_05224273.1| LysA_1 [Mycobacterium intracellulare ATCC 13950] Length = 455 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 58/396 (14%), Positives = 122/396 (30%), Gaps = 37/396 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ID+ + Y R GV+++ A K + + G S E+ Sbjct: 60 TPAYVIDEADFRH--RARRYRRTLRGVEVVYAGKSLLSTAVARWARDEGLGVDVCSAGEL 117 Query: 64 MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + D DAV + I+ ++ ++ A++ +++ + Sbjct: 118 ATALTGGVDPARIVMHGNAKSPDELRDAVRAGVGRIVLDSCMEIAYLAGLARR-RQRVLI 176 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCENKS 171 R+ P + + G + I ++ GL H + Sbjct: 177 RVTPDIDIHGHRAVTTGVSDQKFGFTLAGDHAADAVARVLAHPILDLVGLHCHIGSQVSD 236 Query: 172 F----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 M+ + + +++GGG ++ + + +++ + Sbjct: 237 AALYGEAIRRMIAAMADIRARHGVILTELNIGGGHAIPYVPGDRELDLDELAAAIEDALD 296 Query: 224 KYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL 274 + QI +EPG AI V + V + + L Sbjct: 297 EACAAEQFPRPQIVVEPGRAISGRAGVTLYRVRSVKTQFGGRTFVAVDGGMSDNPRVALY 356 Query: 275 YQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329 + A N P T V GR C +GD ++ GD ++ Y+ + Sbjct: 357 GAQYAVALANRHPLGLKQTVTVAGRHCESGDEIARDIELPADLRPGDLLAVACTGAYHHS 416 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P++ + +R + D Sbjct: 417 MASNYNMVGRPSLVAVKDGRARELVRRETVADLIAR 452 >gi|16766315|ref|NP_461930.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994067|ref|ZP_02575159.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16421563|gb|AAL21889.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205328000|gb|EDZ14764.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261248147|emb|CBG25983.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995162|gb|ACY90047.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159571|emb|CBW19090.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914032|dbj|BAJ38006.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225691|gb|EFX50745.1| Diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323131370|gb|ADX18800.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989881|gb|AEF08864.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 420 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRALGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|227325996|ref|ZP_03830020.1| diaminopimelate decarboxylase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 420 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 59/392 (15%), Positives = 118/392 (30%), Gaps = 46/392 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D Q ++N + + A K + + + + S SL E+ Sbjct: 27 PVWAYDAQTIVNRIAQLRQFD-----TIRFAQKACSNTHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + D +S + + +V L + Q + Sbjct: 82 RALMAGFVPGTDAHEIVFTADLLDRPTLQRVSELNIPVNAGSVDMLEQLGQ--QSPGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQRYQLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + + ++ IE IS GGG+ + Y R K + Sbjct: 199 GHLEQVCEAMVQQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHYYGLWNAAREKIAAH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V + +EPG +V + L V I ++ V+VD+ + + Sbjct: 259 LGHPVTLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDAGFNDLMRPAMYGSYHHVS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +++ G C +GD+F E ++GD + F D Y Sbjct: 319 LLSGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFALPDAQVGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 + + +N + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410 >gi|325104209|ref|YP_004273863.1| diaminopimelate decarboxylase [Pedobacter saltans DSM 12145] gi|324973057|gb|ADY52041.1| diaminopimelate decarboxylase [Pedobacter saltans DSM 12145] Length = 391 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 66/365 (18%), Positives = 119/365 (32%), Gaps = 29/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+Y D L L + G + A+K + + + G S E Sbjct: 17 ETPFYYYDMGLLQQTLKSCKDASSKYGFHVHFAVKSNFNKRVLSAIKEIGFGADCVSGGE 76 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLHKK 117 V E F + K + + D FN +V +L + A + Sbjct: 77 VSRAIETGFTNNDIVFAGVGKSDAEINLALDNDIFCFNVESVHELEVINELAGKKGKKAS 136 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170 + +R+NP+V ++ G D + SE G+ FH + Sbjct: 137 VAIRVNPNVDAHTHHYITTGLDENKFGVNSWDLPKIVDTLKASENIKFLGVHFHVGSQIT 196 Query: 171 S---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSE- 223 F + I++ F ++ +++GGG+ K F++ Sbjct: 197 DMNVFKSLCVKVNEIQQWFEERGVTVKVLNVGGGLGVDYHHPDEHSVADFETYFKIFNDF 256 Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES- 278 K +++ E G A+V + +L T VL + K+ V+VD+ + + L Sbjct: 257 LEVKPHQEVHFELGRALVAQSASLITKVLYLKHGIKKDFVVVDAGMTELMRPALYQAYHK 316 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 V G C + D FG+ GD I+ Y ++ Sbjct: 317 IENISYLDDQTKATKPYDVVGPICESSDCFGKEVELVEASRGDLIALRTAGAYGEVMASF 376 Query: 334 FNGIN 338 +N Sbjct: 377 YNLRP 381 >gi|312891392|ref|ZP_07750909.1| diaminopimelate decarboxylase [Mucilaginibacter paludis DSM 18603] gi|311296086|gb|EFQ73238.1| diaminopimelate decarboxylase [Mucilaginibacter paludis DSM 18603] Length = 428 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 65/404 (16%), Positives = 121/404 (29%), Gaps = 66/404 (16%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP+Y D + L L + A+K + D + Y G S Sbjct: 18 IETPFYYYDLKLLKETLQACADASAKYNFHVHYAMKANFNPRVLDLIQSYGFGADCVSGG 77 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK- 117 EV F + K + +A+ +V +L D A+ +K Sbjct: 78 EVKAAIAHGFDKGKVVFAGVGKSDKEINEALDREIFCFNIESVQELQIINDLAKAKNKTA 137 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNNCEN 169 + +RINP+V ++ G + ++ ++ G+ FH + Sbjct: 138 SVAIRINPNVDAHTHHFITTGLEENKFGVNIWELPAVAEALAKCPHLKFLGIHFHIGSQI 197 Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSE 223 + + ++ F I+ ++LGGG+ + C K F++ Sbjct: 198 TDLGVYKNLCIRVNELQLWFEERGLPIKVLNLGGGLGVDYQQPDANPICDFESYFKVFND 257 Query: 224 ----KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES 278 K + +++ E G A+V + L + VL + KN +I+D+ + + L Sbjct: 258 FLNVKPNQEVHFELGRALVAQSAALVSRVLYVKNGIKKNFLILDAGMTELIRPMLYQAYH 317 Query: 279 ATIYPNTGPY-------------------------------------------TAMVCGR 295 + G V G Sbjct: 318 QIENLSRGEEAGSERQGAGSRKLEPGIGSQEAGNTDSELQTPDSRLNSPGSELKYDVVGP 377 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 C + D F + GD I Y + +N Sbjct: 378 ICESTDCFRKDVDLPESFRGDLIVVRTAGAYGEVMASGYNLRER 421 >gi|166365281|ref|YP_001657554.1| diaminopimelate decarboxylase [Microcystis aeruginosa NIES-843] gi|166087654|dbj|BAG02362.1| diaminopimelate decarboxylase [Microcystis aeruginosa NIES-843] Length = 467 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 51/410 (12%), Positives = 111/410 (27%), Gaps = 45/410 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L L + G +++ A K + + + + G S Sbjct: 56 GSPLYIVDEVTLRTACRQYLQGFQTHYPGESRVIYASKAWNCLALSAVVAREGLGFDVVS 115 Query: 60 LYEVMLGH------EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 E+ +K + + E++ + + II + +L + Sbjct: 116 AGEIHTVLTALDQIKKTDVPIYFHGNNKSIAELEYAIEHNCIIIVDNWLELENLVKLGEN 175 Query: 114 LHKKI---GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMF 163 LR+ P + S+ G + + N GL Sbjct: 176 RPDTPIPILLRLTPGIECHTHEYIRTGHLDSKFGFDPHQIEAVFDYVLAHPLLNCLGLHA 235 Query: 164 HNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL-- 218 H + + + F +E +++GGG+ + + Sbjct: 236 HIGSQIFERQPHQDLAAVLADWFKLGLERGLPLEQLNVGGGLGIRYLESDDPPSIEEWVQ 295 Query: 219 ---------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEA 267 + + EPG +++ TV + E + + + Sbjct: 296 AVSLAVAKACQERGIAYPLLIAEPGRSLIATACVTAYTVGNRKEIPEIRTYIAVDGGMSD 355 Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + A + G+ C +GDI + GD + Sbjct: 356 NPRPITYQSVYRAVVANKMSQECQEVVTIAGKHCESGDILIKDITLPKTNPGDILVVLAT 415 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN------NLS 367 YN + + +N + P + + + D LS Sbjct: 416 GAYNYSMASNYNRLPRPAAVIVQNGEANLILERENLADLLRQDRLPNRLS 465 >gi|332160552|ref|YP_004297129.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664782|gb|ADZ41426.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 420 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 116/398 (29%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + + ++ + A K + + +++ S SL E+ Sbjct: 27 PVWAYDGEIITSKINQLWNFDV-----IRFAQKACSNIHILRLMHEQGVKVDSVSLGEIE 81 Query: 65 LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D ++ + ++ L++ A + Sbjct: 82 RALQAGFQPGQEPAEIVFTADLLDQATLLRVTELSIPVNAGSIDMLDQLGLHA--SGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G +D I+ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIAKIQQYGLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 + + ++ I IS GGG+ + + + Sbjct: 199 QHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNSARERIAAH 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V + +EPG +V L V + + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLVAEAGVLIAQVRAVKNMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E IGD + F D Y Sbjct: 319 VLPADGRSLANEPLIDTVVAGPLCESGDVFTQEAGGGLETRKLPAANIGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416 >gi|312199786|ref|YP_004019847.1| diaminopimelate decarboxylase [Frankia sp. EuI1c] gi|311231122|gb|ADP83977.1| diaminopimelate decarboxylase [Frankia sp. EuI1c] Length = 444 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 55/395 (13%), Positives = 114/395 (28%), Gaps = 36/395 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ Y GV++ A K + + Q S E Sbjct: 50 GTPAYVLDEATFRR--RARQYRAALPGVEVCYAGKALLTRAVARWVAQEGLSLDVCSAGE 107 Query: 63 VMLGHE-KFGGET-HAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F + + A + A+ + I+ ++ +++ A +++ Sbjct: 108 LAVARSVHFPADRLILHGNAKTPEDLKAALDYHVGRIVIDSTDEISHLGPLAH--DQRVL 165 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSF 172 LR+ P V P + G ++ + GL H + Sbjct: 166 LRVTPDVDGHTHHAISTGVPDQKFGIPLGAATDAAGQVLDQPGLRLVGLHCHIGSQLTRI 225 Query: 173 ----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS------ 222 ++ + + +++GGG L Sbjct: 226 GAIEEATRRLIGLLATIRDQHGIVLAQLNIGGGHAVRYTPGDDGFDLAGLAHRLTGALAY 285 Query: 223 --EKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275 E++ ++ +EPG A++ V+ + V + + L Sbjct: 286 ESERHRLPAPRLTVEPGRALIAQAGITLYRVITVKHLPGVRTFVAVDGGMSDNPRPALYG 345 Query: 276 QES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINR 330 + A V GR C AGDI + GD ++ Y+ + Sbjct: 346 ARYTLQLIGRRSLAASHPATVVGRHCEAGDILARDVPLPGDIHAGDLLAVATTGAYHHSL 405 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P + + IR + D Sbjct: 406 ASTYNLVGRPPLVAVHDGTARLLIRRETEEDLLTR 440 >gi|227112405|ref|ZP_03826061.1| diaminopimelate decarboxylase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 420 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 119/392 (30%), Gaps = 46/392 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D Q ++N + + A K + + + + S SL E+ Sbjct: 27 PVWAYDAQTIVNRIAQLRQFD-----TIRFAQKACSNTHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 F + D +S + + +V L + Q + Sbjct: 82 RALIAGFVPGTDAHEIVFTADLLDRPTLQRVSELNIPVNAGSVDMLEQLGQ--QSPGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQRYQLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + + ++ IE IS GGG+ + Y R K + Sbjct: 199 GHLEQVCEAMVQQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHYYGLWNAAREKIAAH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V + +EPG +V + L V I ++ V+VD+ + + Sbjct: 259 LGHPVTLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDAGFNDLMRPAMYGSYHHVS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +++ G C +GD+F E ++GD + F D Y Sbjct: 319 LLPGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFALPDAQVGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 + + +N + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410 >gi|161615953|ref|YP_001589918.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197263510|ref|ZP_03163584.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|161365317|gb|ABX69085.1| hypothetical protein SPAB_03752 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197241765|gb|EDY24385.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 420 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 113/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDLDAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|172056531|ref|YP_001812991.1| diaminopimelate decarboxylase [Exiguobacterium sibiricum 255-15] gi|171989052|gb|ACB59974.1| diaminopimelate decarboxylase [Exiguobacterium sibiricum 255-15] Length = 437 Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 126/398 (31%), Gaps = 36/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ +++L + L T K A K ++ + ++ G + Sbjct: 29 GTPLYVMAERELTDRLATVRDAFLKKYPNTYASFASKALTIGAVYQQVVRHGLGIDVVTG 88 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ + E ++ + K + I+ + ++ + A Sbjct: 89 GELFIARKAGVPAERIYFHGSNKSTQDLQYAVKEGVGKIVIDHYGEIAQLNQIAGDTCQT 148 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 ++ +RI P V ++ G D + +E + G+ H Sbjct: 149 VQVLIRIVPQVIGGAHTKIQTGGVDTKFGFSTHDDSYLQAVEAVLAAEHLVLLGIHCHVG 208 Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRL 218 + + F M+ +E ++LGGG +R+ Sbjct: 209 SQIQEIELFERTARTMMGFVETIRERTSFVASEVNLGGGFGIAYTQDDQPLDFEQTMERV 268 Query: 219 KEFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269 ++ + ++ + EPG +V N T TV I E VD + ++ Sbjct: 269 MAIIDEETTRLAIDRPRIGIEPGRWVVANAGTTLYTVGAIKEVQGVRTYLSVDGGMADNI 328 Query: 270 PDYLLYQESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L T+ V G +C +GD+ E GD ++ Y Sbjct: 329 RPALYGAVYETVIANRIKGETRHVTVVGAACESGDLVAESADLAEPVSGDTLAVFGTGAY 388 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 N + + +N P + N + + +R +Y D Sbjct: 389 NYSMASNYNQFLRPAVVFVNQGESREVVRRQTYADLIQ 426 >gi|167550108|ref|ZP_02343865.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168242786|ref|ZP_02667718.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450314|ref|YP_002046984.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194408618|gb|ACF68837.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205324678|gb|EDZ12517.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205338125|gb|EDZ24889.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 420 Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRYLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|253689848|ref|YP_003019038.1| diaminopimelate decarboxylase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756426|gb|ACT14502.1| diaminopimelate decarboxylase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 420 Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 59/392 (15%), Positives = 119/392 (30%), Gaps = 46/392 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D Q ++N + + A K + + + + S SL E+ Sbjct: 27 PVWAYDAQTIVNRIAQLRQFD-----TIRFAQKACSNTHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 F + D +S + + +V L + Q + Sbjct: 82 RALIAGFVPGTDAHEIVFTADLLDRPTLQRVSELNIPVNAGSVDMLEQLGQ--QSPGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQRYQLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + + ++ IE IS GGG+ + Y R K + Sbjct: 199 GHLEQVCEAMVRQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHYYGLWNAAREKIAAH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V + +EPG +V + L V + ++ V+VD+ + + Sbjct: 259 LGHPVTLEIEPGRFLVAESGVLVAEVRAVKSMGSRHFVLVDAGFNDLMRPAMYGSYHHVS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +++ G C +GD+F E ++GD + F D Y Sbjct: 319 LLPGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFALPDAQVGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 + + +N + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410 >gi|329296888|ref|ZP_08254224.1| diaminopimelate decarboxylase [Plautia stali symbiont] Length = 417 Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 59/395 (14%), Positives = 119/395 (30%), Gaps = 43/395 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D + + + + A K + + + S SL E+ Sbjct: 27 PFWAYDAEIIQQRIAQL-SAFDV----VRFAQKACSNIHILRLMRAAGVKVDSVSLGEIE 81 Query: 65 LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGL 120 GGE + D A + + ++ A + L Sbjct: 82 RALAAGFQPGGEDIVFTADVLDSPTLAR--IAELKVPVNAGSVDMLHQLGAVSPGHSVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 RINP + + S+ G D I + GL H + Sbjct: 140 RINPGFGHGHSQKTNTGGENSKHGIWHSDLPLALAAIPQHGLQLVGLHMHIGSGVD-YGH 198 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK------ 224 + + + F ++ IS GGG+ + + + E+ Sbjct: 199 LQQVCDAMVDQVVAFGQDLQAISAGGGLSIPYRFSEEAIDTQHYYGLWNGARERIAAHLG 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIY- 282 ++V++ +EPG +V + L + V + ++ V+VD+ + + Sbjct: 259 HAVKLEIEPGRFLVAESGVLVSQVRAVKQMGSRHFVLVDAGFSDLMRPSMYGSYHHISLL 318 Query: 283 ------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNIN 329 P ++V G C +GD+F E K+GD + F D Y + Sbjct: 319 PADGSAPGEANVESVVAGPLCESGDVFTQREGGKVETRALPAAKVGDYLVFHDTGAYGAS 378 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + + + R + + Sbjct: 379 MSSNYNSRPLIPEVLFEQGVPREIRRAQTIQELLA 413 >gi|51246812|ref|YP_066696.1| diaminopimelate decarboxylase [Desulfotalea psychrophila LSv54] gi|50877849|emb|CAG37689.1| probable diaminopimelate decarboxylase [Desulfotalea psychrophila LSv54] Length = 419 Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 60/393 (15%), Positives = 122/393 (31%), Gaps = 36/393 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+++ D+ + G + A+K + + + G SS+ E Sbjct: 24 TPFHIYDEAGIKQTGTRLKQAFSGIDGFREYFAVKALPNPAIMKIMQEMGFGFDCSSVAE 83 Query: 63 VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 ++L + G+ + + I A + + A+ Sbjct: 84 LILSRKLGAKGDEIMFTSNNTSPEEFIAAAEDGGCILNLDD------ISLIAKVPKMPET 137 Query: 120 LRINPSVSYSKFILADPNRP-FSRLGEKCKDKIESEIKNVN------GLMFHNNCE---- 168 + + + P ++ G + IE+ GL Sbjct: 138 ICFRYNPGERRTGNDIIGTPVEAKYGVSHEQIIEAYRLAKKAGAKRFGLHTMLASNELNY 197 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE- 223 + +L +EK + ++I++GGG+ + ++ + + + Sbjct: 198 SYMVQTAQMLLALVEKISAELDIKFDFINIGGGLGIPYQPEQNELDLESMAREITAIFDL 257 Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 Y +Y+E G I L T+V++ E ++ V VD+ + A + L Sbjct: 258 FKEKNDYCPALYMESGRFITGPHGILVTSVINKKEIYRDYVGVDACMNALMRPALYGSYH 317 Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C D F + GD + +D + + Sbjct: 318 HIEVLGKETGATTKKVDVAGSLCENNDKFAIQRDLPICENGDLLIIQDTGAHGHAMGFNY 377 Query: 335 NGINMPTIAVKNVDG-TIKAIREFSYNDYYNNL 366 NG P + + +G T RE +DY+ L Sbjct: 378 NGKMRPQELLFDSEGNTALIRREERLSDYFATL 410 >gi|16761791|ref|NP_457408.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143275|ref|NP_806617.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213163566|ref|ZP_03349276.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425813|ref|ZP_03358563.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213865437|ref|ZP_03387556.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25290925|pir||AG0867 diaminopimelate decarboxylase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504093|emb|CAD02839.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi] gi|29138909|gb|AAO70477.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 420 Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 112/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYHEGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRYLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|300781428|ref|ZP_07091282.1| diaminopimelate decarboxylase [Corynebacterium genitalium ATCC 33030] gi|300533135|gb|EFK54196.1| diaminopimelate decarboxylase [Corynebacterium genitalium ATCC 33030] Length = 466 Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 46/403 (11%), Positives = 108/403 (26%), Gaps = 41/403 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D+ + + + A K F + +N+ +S E Sbjct: 62 GTPVMVVDEDDFRSRCRDMVRAYGKPE-NVHYASKAFLTTHIARWVNEEGLSLDVASENE 120 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQK--LHKK 117 +++ F E + K ++ ++ +L + + A + ++ Sbjct: 121 LLIALHAGFPAERITVHGNNKPDSFLRRCVREGVGEVVIDSHQELEELERIAGEEGTVQE 180 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168 + +R+ P V + + G E++ + GL H + Sbjct: 181 VFIRVKPGVEAHTHEFIATSHEDQKFGLSLVSGSAYRAAVAASEADNIQLTGLHCHVGSQ 240 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ---------------IEWISLGGGIHFTDKDYPVKD 213 F + + + I + + + D + Sbjct: 241 VFDAEGFKLAAARVLGLYAQIYRELGLELGYLDLGGGYGIAYTNEEQPLAVDDVAKDLLK 300 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267 + ++ +EPG AI +V + + + Sbjct: 301 AVAEKADELGITPPEVIVEPGRAIAGPAAVTVYSVGTVKDVHVTDEATRRYIAVDGGMSD 360 Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFED 322 ++ L + + P + G C +GDI + GD I+ Sbjct: 361 NIRTALYGADYDARVVNRLTDGTPQATRMVGAHCESGDILINNALWPDDIASGDLIALAA 420 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + +R + D Sbjct: 421 TGAYCYSMASNYNCFGRPAVVSVKDGVVTPMVRRETVEDILAR 463 >gi|56414960|ref|YP_152035.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363889|ref|YP_002143526.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56129217|gb|AAV78723.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095366|emb|CAR60924.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 420 Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + +I Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRI 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + ++ IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDLDAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|196232014|ref|ZP_03130869.1| diaminopimelate decarboxylase [Chthoniobacter flavus Ellin428] gi|196223736|gb|EDY18251.1| diaminopimelate decarboxylase [Chthoniobacter flavus Ellin428] Length = 429 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 72/409 (17%), Positives = 128/409 (31%), Gaps = 48/409 (11%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP++L D + + + ++ GV+ A+K A + + + S Sbjct: 15 VGTPFWLYDARVIRQRIADIQFLTDTEGVQARFAMKACPATKVLKEMKAANIWIDAVSGN 74 Query: 62 EVMLGHEKF------GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 EV+ ++D + VL N + Q+ K Sbjct: 75 EVLRALRAGHPTGHQPPVICLTCDVFRDNALPVVLENGILPNIGSPGQIADLKKA--GYS 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCEN 169 I +R+NP + D P S+ G +D ++ + L H Sbjct: 133 GPISVRVNPGFGHGHVNACDTGGPSSKHGIWLEDLFATKEMADKAGLEITMLHAHIGSGP 192 Query: 170 KSFLCFSAMLKNIEKE--FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + + + T++ ISLGGGI +D+ + + L E Sbjct: 193 QFQELHDNLTRLAAEFVTLLEKFTKVNTISLGGGIPHNYRDHGAQVPIEPLHELFASCHQ 252 Query: 228 QIY----------LEPGEAIVTNTTTLNTTVLDISENIKN-------LVIVDSSVEAHVP 270 ++ +EPG V TL T V D+ + N +VD+ V Sbjct: 253 RLVSKARRDLRLEIEPGRYYVAPGCTLVTRVTDVKQTRSNEKGSGATFAMVDAGFVDLVR 312 Query: 271 DYLLYQESATIYPNTGP-------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGD 316 + A +V G C +GDIF GD Sbjct: 313 PAMYGSYHAIDIVGKDDEDPNVPREPIVVAGPLCESGDIFTRDDRELLAPRLLPRPAAGD 372 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI-REFSYNDYYN 364 ++ D Y + +N I DG+++ I R + +D Sbjct: 373 LLTLRDAGAYGYAMSSNYNSIGRAPQLWLEDDGSVEIISRRENIDDLLK 421 >gi|317506159|ref|ZP_07963981.1| diaminopimelate decarboxylase [Segniliparus rugosus ATCC BAA-974] gi|316255547|gb|EFV14795.1| diaminopimelate decarboxylase [Segniliparus rugosus ATCC BAA-974] Length = 451 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 55/401 (13%), Positives = 125/401 (31%), Gaps = 41/401 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P +++DK + + A K F + + L++ S E Sbjct: 46 GSPLFVVDKDDFTDRCRRWAEAFGPRN--VHYASKAFLSGQLAHWLDEEGLALDVCSGGE 103 Query: 63 VMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F + K AV + ++ ++ ++ + + +L + Sbjct: 104 LAIALRGGFPPGRITLHGNNKSVAELRRAVDVGVEAVVLDSFEEIARLDEVCAELGREQD 163 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + + + G H + Sbjct: 164 VLVRLTVGVEAHTHEAIATAHEDQKFGFSVASGVALEAVRRVLARPRLRLIGFHSHIGSQ 223 Query: 169 NKSFLCFSAMLKNIEKEFGHF------ITQIEWISLGGGIHFTDKDY----PVKDFCQRL 218 F + I + + LGGG+ + + D + + Sbjct: 224 ILDLDGFRLAAGRVAAFAEEAVRALGAIPTLRVLDLGGGLGVSYQPDERPPAPSDLAEAV 283 Query: 219 KEFSEKYSV----QIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEAH 268 ++ E+Y + +EPG +++ + T TV + + V VD + + Sbjct: 284 RKEIEQYPAAAGLSVAVEPGRSVIASGTVTLYTVGTVKHVVLDGGATRTYVSVDGGMSDN 343 Query: 269 VPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDV 323 + L + + + P + V G+ C GDI V GD ++ Sbjct: 344 IRPALYGAKYDARLVSRVGASEPAQSRVVGKHCETGDILVRDCLLPQDVAPGDVLAVAST 403 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + P +A + +R + D + Sbjct: 404 GAYCYSLSSRYNALLRPAVAAVEDGRSWLMLRRETEADLLS 444 >gi|168231114|ref|ZP_02656172.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194444444|ref|YP_002042264.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194471848|ref|ZP_03077832.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197251631|ref|YP_002147923.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238909791|ref|ZP_04653628.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194403107|gb|ACF63329.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194458212|gb|EDX47051.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197215334|gb|ACH52731.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205334564|gb|EDZ21328.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 420 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|300718186|ref|YP_003742989.1| Diaminopimelate decarboxylase [Erwinia billingiae Eb661] gi|299064022|emb|CAX61142.1| Diaminopimelate decarboxylase [Erwinia billingiae Eb661] Length = 417 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 59/396 (14%), Positives = 121/396 (30%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + + A K + + + S SL E+ Sbjct: 27 PVWAYDASVIAERISQLQQFDV-----VRFAQKACSNIHILRLMRAAGVKVDSVSLGEIE 81 Query: 65 LGH-EKF--GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 F GG+ + D A L+ + +V L++ + ++ + L Sbjct: 82 RALVAGFTPGGDEIVFTADVLDEPTLARLAELKIPVNAGSVDMLHQLGEVSEGHP--VWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLC 174 R+NP + + S+ G + I+ + G+ H + Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWYTDLVLALEAIKQHRLKLVGIHMHIGSGVD-YAH 198 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224 + + + +E IS GGG+ + Y R + Sbjct: 199 LEQVCDAMVNQVIGLGHDLEAISAGGGLSIPYRFGEEAINTEHYFGLWDAARQRVAKHLG 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA---- 279 + V++ +EPG +V + L + V + ++ V+VD+ + + Sbjct: 259 HPVKLEIEPGRFLVAESGVLVSKVRAVKAMGSRHFVLVDAGFNDLMRPAMYGSYHHISAI 318 Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 ++V G C +GD+F E VK GD + F D Y Sbjct: 319 AGDDRPLDEQNTVDSVVAGPLCESGDVFTQLEGGKVETRALPQVKPGDYLVFHDTGAYGA 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 SMSSNYNSRPLLPEVLFEAGQPREIRRPQTIQELLA 414 >gi|168820255|ref|ZP_02832255.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|200388738|ref|ZP_03215350.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207858276|ref|YP_002244927.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|199605836|gb|EDZ04381.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205342949|gb|EDZ29713.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206710079|emb|CAR34434.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320087440|emb|CBY97205.1| Diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 420 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|119715978|ref|YP_922943.1| diaminopimelate decarboxylase [Nocardioides sp. JS614] gi|119536639|gb|ABL81256.1| diaminopimelate decarboxylase [Nocardioides sp. JS614] Length = 466 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 61/404 (15%), Positives = 117/404 (28%), Gaps = 43/404 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y++D+ + + A + A K F + + + S Sbjct: 59 VNTPAYVLDEADFR--MRARAFRDAFAAYDVFYAGKAFLCTTVARWVQEEGLCLDVCSNG 116 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHK 116 E+ + F Y+ K A+ + II ++ +L + + L Sbjct: 117 ELTVALRAGFDPARIGYHGNNKTVTELRRALAAGVGRIIVDSFDELARLEMITADSGLPA 176 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNC 167 ++ +R+ V + G + + ++ GL H Sbjct: 177 RVMIRVTAGVEAHTHEYIATAHEDQKFGFSITSGDAFEAARRAEAAPGIDLLGLHSHIGS 236 Query: 168 EN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 + + +L + + + LGGG +L Sbjct: 237 QIFDSSGFEVAARRVLALQARISQELGVTLPEMDLGGGFGIAYTTQDDPAEPAQLAPAMT 296 Query: 224 KYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVE 266 K +EPG AIV TV + + V VD + Sbjct: 297 KIVEHECRALGIPEPRLSIEPGRAIVGPAMCTVYTVGTVKPVQLDGGAVRTYVSVDGGMS 356 Query: 267 AHVPDYLLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320 ++ L + + G A V G+ C AGDI + F V+ GD ++ Sbjct: 357 DNIRTALYDADYSCTLASRPSTIGGSVLARVVGKHCEAGDIVVKDEFLPADVRPGDLVAV 416 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N P + +R + +D Sbjct: 417 PGTGAYCRSMASNYNHALRPPVVAVRDGVARVVVRRETEDDLLA 460 >gi|198243318|ref|YP_002216988.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937834|gb|ACH75167.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624755|gb|EGE31100.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 420 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAIMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|326629067|gb|EGE35410.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 420 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 114/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ + + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSISYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|168463825|ref|ZP_02697742.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195633600|gb|EDX52014.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 420 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 112/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + +I Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRI 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYHEGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|119960514|ref|YP_948333.1| diaminopimelate decarboxylase [Arthrobacter aurescens TC1] gi|119947373|gb|ABM06284.1| diaminopimelate decarboxylase [Arthrobacter aurescens TC1] Length = 490 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 62/427 (14%), Positives = 117/427 (27%), Gaps = 64/427 (14%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP +++ + A GV + A K F + + + Sbjct: 57 GTPLFVMSESDFRARARAFKDAFDAAFADICGGVDVYYAGKSFLCTAVASWVAEEGLRLD 116 Query: 57 SSSLYE-VMLGHEKF-GGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E + G + D E A+ I+ +++ +L + A Sbjct: 117 TCSGGELAVAARAGIEGPNLGLHGNNKSDAEINRALDMLLGRIVVDSLDELERVAKIASS 176 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-----------------KIESE 154 K+ LR+ P V + G + Sbjct: 177 RGETAKVMLRLTPGVHAHTHEFIATAHEDQKFGLSMAEDSTEEAGLSAAEEAVAAATSYA 236 Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYP 210 + GL H + F+ + + + + + LGGG Sbjct: 237 SIELLGLHCHIGSQIFEPDGFAVAAEKLLGFLAAMQAKYSIVMPELDLGGGYGIAYTPVD 296 Query: 211 VKDFCQRLKE-----------FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE------ 253 + + + +I +EPG AIV +TT V + Sbjct: 297 TPRPAAEIAQAMADVVRSKCAELDITPPRISIEPGRAIVGSTTFTLYEVGTLKTVRVDAP 356 Query: 254 ----------NIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRSCLA 299 + V VD + + L + + I + P + V G+ C + Sbjct: 357 EGEETQENVTYPRRYVSVDGGMSDNARPVLYDADYSAILASRNSSAAPQLSRVVGKHCES 416 Query: 300 GDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 GDI + V GD ++ Y + +N + P + +R + Sbjct: 417 GDIVVRDVYLPADVAAGDLLAVPGTGAYCWALSSNYNYLARPGVVAVRDGAARLIVRGET 476 Query: 359 YNDYYNN 365 D N Sbjct: 477 EEDLLNR 483 >gi|71897691|ref|ZP_00679936.1| Aspartate kinase [Xylella fastidiosa Ann-1] gi|71732594|gb|EAO34647.1| Aspartate kinase [Xylella fastidiosa Ann-1] Length = 868 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 99/362 (27%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ + + A+K + TL + G SL E+ Sbjct: 510 PCYVYHLPTVRERARQLNAVAAVDQC--YYAIKANPHPAILRTLIEEGFGLECVSLGELR 567 Query: 65 LGHEKFG---GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + ++ + + + + + + + LR Sbjct: 568 HAFEVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVEALRLWPEVFR-ERTLWLR 626 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLCF 175 I+ S+ G K E V GL H + + Sbjct: 627 IDLGYGDGHHEKVTTGGKTSKFGLSVKRIDEFIDVAKTLNITVTGLHAHLGSGVERGNHW 686 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFSEKYSVQIY 230 S M + + + +GGG+ + + + Q+ Sbjct: 687 SRMYDELAGFASRIG-SVSTLDIGGGLPIPYRPDDEPFDVGAWGASLAEVKALHPKFQLV 745 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 +EPG +V L T V + E V +++ + + L + T Sbjct: 746 IEPGRFLVAEAGVLLTRVTQVIEKDDILRVGLEAGMHTLIRPALYDAWHGVENLSRLDET 805 Query: 290 ----AMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPTIAV 344 V G C + D+FG GD + D Y + + +N +P V Sbjct: 806 PHVLCDVVGPICESSDVFGRRRHLPAATASGDLMLIADAGAYGFSMASTYNLRGLPAEVV 865 Query: 345 KN 346 + Sbjct: 866 LD 867 >gi|308187988|ref|YP_003932119.1| Diaminopimelate decarboxylase [Pantoea vagans C9-1] gi|308058498|gb|ADO10670.1| Diaminopimelate decarboxylase [Pantoea vagans C9-1] Length = 418 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 111/396 (28%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D Q + + + A K + + + S SL E+ Sbjct: 27 PFWAYDAQIIQARIAQLQ-AFDV----VRFAQKACSNIHILRLMRAAGVKVDSVSLGEIE 81 Query: 65 LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGL 120 GG+ + D A + ++ A + L Sbjct: 82 RALAAGYQSGGDEIVFTADLFDQPTLAR--ITALKVPVNAGSIDMLHQLGAVSPGHAVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 R+NP + + S+ G D I+ + G+ H + Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWHDDLDEALAAIKQHGLKLVGIHMHIGSGVD-YSH 198 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224 + + + + IS GGG+ Y R + Sbjct: 199 LQQVCDAMVELVMASGQDLTAISAGGGLSIPYRYGEEAIDTDHYFGLWDAARQRIAQHLG 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++V++ +EPG +V L + V + ++ V+VD+ + + Sbjct: 259 HAVKLEIEPGRFLVAEAGVLVSQVRAVKSMGSRHFVLVDAGFSDLMRPSMYGSYHHISLM 318 Query: 284 NTGPY--------TAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 +V G C +GD+F E K+GD + F D Y Sbjct: 319 AGDERAIDEQQTIDTVVAGPLCESGDVFTQLEGGMVEPRAMPTAKVGDYLVFHDTGAYGA 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + Sbjct: 379 SMSSNYNSRPLIPEVLFEQGQPREIRRAQTIESLLA 414 >gi|50122573|ref|YP_051740.1| diaminopimelate decarboxylase [Pectobacterium atrosepticum SCRI1043] gi|49613099|emb|CAG76550.1| diaminopimelate decarboxylase [Pectobacterium atrosepticum SCRI1043] Length = 420 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 59/392 (15%), Positives = 120/392 (30%), Gaps = 46/392 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D Q ++N + + A K + + +++ S SL E+ Sbjct: 27 PVWAYDAQTIVNRITQLRQFD-----TIRFAQKACSNTHILRLMHEQGVKVDSVSLGEIE 81 Query: 65 LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 F + D +S + + +V L + Q + Sbjct: 82 RALIAGFVPGTDAHEIVFTADLLDRPTLQRVSELNIPVNAGSVDMLEQLGQ--QSPGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I+ + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQRYQLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 + + + ++ IE IS GGG+ + Y R K + Sbjct: 199 GHLEQVCEAMVQQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHYYGLWNAAREKIAAH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + + + +EPG +V + L V I ++ V+VD+ + + Sbjct: 259 LGHPITLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDAGFNDLMRPAMYGSYHHVS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + +++ G C +GD+F E ++GD + F D Y Sbjct: 319 LLSGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFSLPDAQVGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 + + +N + + R + Sbjct: 379 GASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410 >gi|322613414|gb|EFY10355.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621006|gb|EFY17864.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624069|gb|EFY20903.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628191|gb|EFY24980.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633310|gb|EFY30052.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636112|gb|EFY32820.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639450|gb|EFY36138.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643689|gb|EFY40241.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648801|gb|EFY45248.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653857|gb|EFY50183.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657963|gb|EFY54231.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664065|gb|EFY60264.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667033|gb|EFY63205.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673083|gb|EFY69190.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677927|gb|EFY73990.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681102|gb|EFY77135.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685698|gb|EFY81692.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194837|gb|EFZ80024.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196588|gb|EFZ81736.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204999|gb|EFZ89982.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207800|gb|EFZ92746.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212648|gb|EFZ97465.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214869|gb|EFZ99617.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222600|gb|EGA06965.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225120|gb|EGA09372.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230643|gb|EGA14761.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235007|gb|EGA19093.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239045|gb|EGA23095.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244597|gb|EGA28603.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247212|gb|EGA31178.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253305|gb|EGA37134.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256388|gb|EGA40124.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262436|gb|EGA45992.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267468|gb|EGA50952.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269128|gb|EGA52583.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 420 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 56/397 (14%), Positives = 113/397 (28%), Gaps = 46/397 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELL 415 >gi|292487152|ref|YP_003530022.1| diaminopimelate decarboxylase [Erwinia amylovora CFBP1430] gi|292900469|ref|YP_003539838.1| diaminopimelate decarboxylase [Erwinia amylovora ATCC 49946] gi|291200317|emb|CBJ47445.1| diaminopimelate decarboxylase [Erwinia amylovora ATCC 49946] gi|291552569|emb|CBA19614.1| Diaminopimelate decarboxylase [Erwinia amylovora CFBP1430] Length = 417 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 121/396 (30%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D + + + A K + + + S SL E+ Sbjct: 27 PFWAYDASIIGERISQLQQFDV-----VRFAQKACSNIHILRLMRAAGVKVDSVSLGEIE 81 Query: 65 LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 GG+ + D A ++ + +V L++ + + L Sbjct: 82 RALAAGYLTGGDEIVFTADLLDKPTLARVAELKIPVNAGSVDMLHQLGQVS--AGHPVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLC 174 R+NP + + S+ G + IE+ + G+ H + Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWYGDMALALEAIETYQLQLVGIHMHIGSGVD-YAH 198 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224 + + F ++ IS GGG+ + Y R + Sbjct: 199 LEQVCDAMVNHIISFGQDLQAISAGGGLSVPYRFGEETIDTQHYFGLWDAARQRVERHLG 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA---- 279 + V++ +EPG +V + L + V + + ++ V+ D+ + + Sbjct: 259 HPVKLEIEPGRFLVAESGVLISQVRAVKNMGSRHFVLADAGFNDLMRPSMYGSYHHISAI 318 Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 ++V G C +GD+F E V++GD + F D Y Sbjct: 319 AGDGRALDEVNTVESVVAGPLCESGDVFTQLEGGKVETRALPTVQVGDYLVFHDTGAYGA 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 SMSSNYNSRPLLAEVLFENGQPRQIRRAQTVAELLA 414 >gi|113476062|ref|YP_722123.1| diaminopimelate decarboxylase [Trichodesmium erythraeum IMS101] gi|110167110|gb|ABG51650.1| diaminopimelate decarboxylase [Trichodesmium erythraeum IMS101] Length = 475 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 50/401 (12%), Positives = 108/401 (26%), Gaps = 38/401 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y+ID+ L + +L A K +++ + G S Sbjct: 60 GSPLYIIDEYTLRTACRQYRDGLQKYYPGESLVLYASKAWSSLAVCALCASEGLGIDVVS 119 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKK 117 E+ E + ++ K D I+ + +L ++ + Sbjct: 120 GGELYTAIEAGVNPDKIYFHGNNKSLAELTFAIETDCIIVVDNWLELETLAGLKKQQKDQ 179 Query: 118 ------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFH 164 I +R P + S+ G + E+ + G+ H Sbjct: 180 VQNPTKIMVRFTPGIECHTHEYIRTGHLDSKFGFDPGQLNDVFAFISKEELLLLIGVHAH 239 Query: 165 NNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221 + ++ + I+ I++GGG+ + + Sbjct: 240 IGSQIFEVQPHQDLVTVMVDTMTTAMSHNLPIKEINIGGGLGIRYTETDDPPSIETWVHK 299 Query: 222 SEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268 V + EPG +I+ T+ E + + + + Sbjct: 300 VSTAMVDVCKARQLPLPKLLCEPGRSIIGPACITAYTIGSQKEIPEIRTYISVDGGMSDN 359 Query: 269 VPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 A + G+ C +GDI + + GD Sbjct: 360 PRPITYQSVYRAIVANRLSKPSTEVVTIAGKHCESGDILIKNATLPVTQPGDCFVVMATG 419 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 YN + + +N + P + ++ +Y D + Sbjct: 420 AYNYSMASNYNRLPRPAAVLVAEKEVNIILQRETYQDLLSK 460 >gi|205353953|ref|YP_002227754.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273734|emb|CAR38727.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Length = 420 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 115/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NPS + + S+ G D + + G+ H Sbjct: 140 WLRVNPSFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ + + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSISYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|204928332|ref|ZP_03219532.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322654|gb|EDZ07851.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 420 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 114/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 + N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRAFENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|269794309|ref|YP_003313764.1| diaminopimelate decarboxylase [Sanguibacter keddieii DSM 10542] gi|269096494|gb|ACZ20930.1| diaminopimelate decarboxylase [Sanguibacter keddieii DSM 10542] Length = 462 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 58/412 (14%), Positives = 121/412 (29%), Gaps = 50/412 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP +++D+Q + A V + A K F + + + Sbjct: 47 GTPAFVLDEQHFRDRARLFRDSFSEAFGSVGAEVDVYYAGKSFLSVAVARWAREEGLRVD 106 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + + E+ + G + D A+ + I+ ++ +++++ + A+ Sbjct: 107 TCTGGELAVALRAGVPGAEIGLHGNNKSDDEITRAIEAEVGRIVVDSFAEIDRVAELARA 166 Query: 114 LHKKIG------LRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEIKNVN------ 159 + G +R+ + + G + + + Sbjct: 167 AGRDGGARVPVMVRVTTGIHAGGHEFISTAHEDQKFGVSLTGGQALAALQAVLEHPELEL 226 Query: 160 -GLMFHNNCENKSFL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF 214 G H + + ML + + + LGGG V Sbjct: 227 LGAHTHIGSQIQDAAAFEANARKMLALRAELQAATGYLLPELDLGGGYGIAYVPSDVPID 286 Query: 215 CQRLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KN 257 L +I +EPG ++V +TT TV + + Sbjct: 287 VPALARDLADVVGSVCAELGTTVPRISIEPGRSVVGSTTVTLYTVGVVKPVTLEDGSVRT 346 Query: 258 LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PV 312 V VD + ++ L E A + A V G+ C +GDI V Sbjct: 347 YVSVDGGMSDNIRPALYEAEYTARLANRTGSAETVAARVVGKHCESGDIVISDIELPADV 406 Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 GD ++ Y + + +N + P + +R + +D + Sbjct: 407 ARGDLLAVPATGAYGRSMASNYNHVLRPPVVAVADGAARVIVRRETEDDLLS 458 >gi|312171258|emb|CBX79517.1| Diaminopimelate decarboxylase [Erwinia amylovora ATCC BAA-2158] Length = 417 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 121/396 (30%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D + + + A K + + + S SL E+ Sbjct: 27 PFWAYDASIIGERISQLQQFDV-----VRFAQKACSNIHILRLMRAAGVKVDSVSLGEIE 81 Query: 65 LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 GG+ + D A ++ + +V L++ + + L Sbjct: 82 RALAAGYLTGGDEIVFTADLLDKPTLARVAELKIPVNAGSVDMLHQLGQVS--AGHPVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLC 174 R+NP + + S+ G + IE+ + G+ H + Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWYGDMALALEAIETYQLQLVGIHMHIGSGVD-YAH 198 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224 + + F ++ IS GGG+ + Y R + Sbjct: 199 LEQVCDAMVNHVISFGQDLQAISAGGGLSVPYRFGEETIDTQHYFGLWDAARQRVERHLG 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA---- 279 + V++ +EPG +V + L + V + + ++ V+ D+ + + Sbjct: 259 HPVKLEIEPGRFLVAESGVLISQVRAVKNMGSRHFVLADAGFNDLMRPSMYGSYHHISAI 318 Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 ++V G C +GD+F E V++GD + F D Y Sbjct: 319 AGDGRALDEVNTVESVVAGPLCESGDVFTQLEGGKVETRALPAVQVGDYLVFHDTGAYGA 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 SMSSNYNSRPLLAEVLFENGQPRQIRRAQTVAELLA 414 >gi|159029858|emb|CAO90912.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 467 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 50/410 (12%), Positives = 108/410 (26%), Gaps = 45/410 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P Y++D+ L L + G +++ A K + + + G S Sbjct: 56 GSPLYIVDEVTLRTACGQYLQGFQTHYPGESRVIYASKAWNCLAVSAVVASEGLGFDVVS 115 Query: 60 LYEVMLGHEKFGG------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 E+ + + E++ + + II + +L + Sbjct: 116 AGEIHTVLTALDQSNKTDVPIYFHGNNKSIAELEYAIEHNCIIIVDNWLELENLVKLGEN 175 Query: 114 LHKKI---GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMF 163 LR+ P + S+ G + + N GL Sbjct: 176 RPDTPIPVLLRLTPGIECHTHEYIRTGHLDSKFGFDPHQIEAVFDYVLAHPVLNCLGLHA 235 Query: 164 HNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL-- 218 H + + + F +E +++GGG+ + + Sbjct: 236 HIGSQIFERQPHQDLAAVLADWFKLGLERGLPLEQLNVGGGLGIRYLESDDPPSIEEWVQ 295 Query: 219 ---------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEA 267 + + EPG +++ TV + E + + + Sbjct: 296 AVSLAVAKACQERGIAYPLLIAEPGRSLIATACVTAYTVGNRKEIPEIRTYIAVDGGMSD 355 Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + A + G+ C +GDI + GD + Sbjct: 356 NPRPITYQSVYRAVVANKMSQECQELVTIAGKHCESGDILIKDIALPKTNPGDILVVLAT 415 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN------NLS 367 YN + + +N + P + + + D LS Sbjct: 416 GAYNYSMASNYNRLPRPAAVIVQNGEANLILERENLADLLRQDRLPNRLS 465 >gi|217967747|ref|YP_002353253.1| diaminopimelate decarboxylase [Dictyoglomus turgidum DSM 6724] gi|217336846|gb|ACK42639.1| diaminopimelate decarboxylase [Dictyoglomus turgidum DSM 6724] Length = 423 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 59/389 (15%), Positives = 125/389 (32%), Gaps = 28/389 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYI---RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y++DK+ L+ + K+L A+K + Y G S+ Sbjct: 31 GTPLYILDKETLIFQAQKYINSWKKYYKNKYKVLFAIKALPILEVIRIFKNYGLGALVST 90 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ + E ++ K + II + + K K K Sbjct: 91 GGELYIALSANVPSEDIYFHGNAKTLKEIEYAIDQKVGAIIIDNFDEYEKIKYVLSKKDT 150 Query: 117 KI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNC 167 K+ +RI P++ + + ++ G + + + G+ H Sbjct: 151 KVKVLVRIIPNIEVNTHKSIRTGQTDTKFGLPIEQALVLIEKINTEKNIIFKGIHSHIGS 210 Query: 168 ENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 + + + + + + + +E +S+GGG+ + L Sbjct: 211 QIFDISAYVKLSEVLSEVYKELNSKNITVEEMSIGGGLGVAYTKEDNPPDIEDLAREVSN 270 Query: 225 -------YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQ 276 ++ ++ EPG ++V + E I+ V VD + ++ L Sbjct: 271 KFSETIGHNFKLICEPGRSLVGRAGITLYRIESRKELGIRKYVSVDGGMSDNIRPSLYGA 330 Query: 277 ESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + + G + G+ C +GDI + GD + YN + W+ Sbjct: 331 KYSALIITKGDREEIFSIAGKHCESGDILIKDFSGLWPNPGDYLITFTTGAYNFSMYTWY 390 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYY 363 N P + + ++ +Y D Sbjct: 391 NATPRPAVVLVENGKDRIIVKRENYEDLL 419 >gi|148259756|ref|YP_001233883.1| diaminopimelate decarboxylase [Acidiphilium cryptum JF-5] gi|146401437|gb|ABQ29964.1| diaminopimelate decarboxylase [Acidiphilium cryptum JF-5] Length = 438 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 52/388 (13%), Positives = 111/388 (28%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ + L G + A+K + + G +S Sbjct: 44 GTPTWVYSAATIEGRLAALRAAFAGEGLAPAIRYAVKANDHLAILGLVRAGGAGADVTSA 103 Query: 61 YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E ++ +D A+ + + + +L A + Sbjct: 104 GEFARAEAAGIAPGAMVFSGVGKREDELRRALAAGIGQLNVESAEELEMISGIAAAMGVA 163 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENK 170 + LR+NP V+ R + G D + + + + F + ++ Sbjct: 164 APVALRVNPDVAAGGHDKISTGRKGDKFGIGFDDAGALYRRAAALPGIEAVGFSTHIGSQ 223 Query: 171 SFLCFSAMLKNIEK-----EFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222 F + + + LGGG D +P ++ Sbjct: 224 IFAPAAFEAAYRRVLGLIGALRGEGLAVRRLDLGGGFGIPYDDGTAFPFAAQAAMVRRVL 283 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATI 281 + +++ +EPG +V L V + + V++D+ + + L + Sbjct: 284 GGHDLELIVEPGRWLVGPAGVLLARVTLVKRAGAERFVVLDAGMNDLIRPALYGARHGIV 343 Query: 282 -----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 P A V G C + D FG + G ++ D Y + +NG Sbjct: 344 PVGAADAAGAPAPAEVVGPVCESSDRFGTHD-LPELAPGALVALLDAGAYGATMSSTYNG 402 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + R + ++ + Sbjct: 403 RPFAAQVMIADGAPQLIRRRQTLDELWR 430 >gi|16082554|ref|NP_394250.1| diaminopimelate decarboxylase [Thermoplasma acidophilum DSM 1728] Length = 402 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 70/382 (18%), Positives = 132/382 (34%), Gaps = 30/382 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP + + ++++N+ +N V++L ++K + + ++Q G+ S+S E Sbjct: 28 GTPVIIYSRARIVSNIRRIREAYENR-VRMLYSVKANDNPRIIEIMHQESIGSDSASPME 86 Query: 63 VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 +M+ E Y+ + I FNT +Q K ++K ++I Sbjct: 87 IMMSIFSGIPPEDILYSPNNASEYDLNFALDRGIAINFNTFTQYRKMREK----PERISF 142 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF-- 172 RINP +F ++ G I + K G+ N+ Sbjct: 143 RINPGFGMGEFAGTTTGGARTKFGIDPDAAILAYRKAREDGIREFGIHMMIGSNNRDHVK 202 Query: 173 --LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-----KEFSEKY 225 +S + ++ ++ +GGG+ + L KEF + Sbjct: 203 IAEAYSNFFRIADRIGREAGVSFQFADVGGGLGIPYVQGENELDIAALGSAVLKEFDRYH 262 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 + LEPG +V + + TV D+ D + ++ L I Sbjct: 263 FGDLVLEPGRYLVGDAGIIVGTVNDVHNG---FAGTDIGMNLNIRPALYGARHTIIPVGE 319 Query: 286 --GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 V G+ C D G+ + + GDRI D Y + + +NG P Sbjct: 320 RVEGEKITVTGQICENTDRIGDTAW--RLSEGDRIMVLDAGAYVYSMSSRYNGRPRPPEI 377 Query: 344 VKNVDGTIK-AIREFSYNDYYN 364 + DG R ++D+ Sbjct: 378 MIMEDGKDVMIRRREDFSDFIA 399 >gi|254497522|ref|ZP_05110314.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella drancourtii LLAP12] gi|254353239|gb|EET11982.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella drancourtii LLAP12] Length = 853 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 115/365 (31%), Gaps = 25/365 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y+ L ++ L A+K + TL + G S+ Sbjct: 494 LNSPCYVYHSPTQAARAQQLL-ALESID-TLFYAIKANPYPSILQTLEKEGVGFECVSIQ 551 Query: 62 EVMLGHEKFG---GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117 E+ E F + + + N I +++ L + +++ Sbjct: 552 ELDRILELFPNIDKQRILFTPNFAPKTEYEYALNIGCFITIDSLYPLEHWPQL--FKNRE 609 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKS 171 + +RI+P S+ G D + +V GL H+ + Sbjct: 610 VIVRIDPGAGAGHHKHVSTAGNESKFGITQNDLAQVIALTKKNNIHVIGLHAHSGSGILT 669 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYSV 227 + ++ ++++I+LGGG+ +K + L +Y Sbjct: 670 PELW-QQTASMLASLTEHFPEVKYINLGGGLGIVEKPGQQPLDFANLDALLMAVKSRYPH 728 Query: 228 -QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---- 281 +I+LEPG V + + V E K I +++ + + + L + Sbjct: 729 LEIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEIVNLSR 788 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + G C +GD G + GD + + Y + +N Sbjct: 789 LHEEKAGFSHIVGPICESGDTLGYDRLLPVTEEGDVLLIANAGAYGRCMSSHYNLRPPAE 848 Query: 342 IAVKN 346 V + Sbjct: 849 EIVLD 853 >gi|256395876|ref|YP_003117440.1| diaminopimelate decarboxylase [Catenulispora acidiphila DSM 44928] gi|256362102|gb|ACU75599.1| diaminopimelate decarboxylase [Catenulispora acidiphila DSM 44928] Length = 423 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 54/389 (13%), Positives = 114/389 (29%), Gaps = 32/389 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D L + K F A + L + S E Sbjct: 37 GTPLYVLDAADFRARCSAWLDAF--PNGDVHYGGKAFLAPAVVGWLAELGLCLDVCSGGE 94 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + E ++ K AV I+ +++ ++ + A + + Sbjct: 95 LAVARVGGMPPERVVFHGNNKSVAEIRQAVAWGVGCIVLDSLHEVERVARAAAEAGTRQP 154 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ P + + ++ G E + + GL H + Sbjct: 155 VMVRVKPGIDAATHASLATGGERTKFGMSMASGEAMEAVRRVLGESALEFIGLHSHIGSQ 214 Query: 169 NKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTD--KDYPVKDFCQR--LKE 220 F+ + + + + LGGG+ + P + Sbjct: 215 IFDLDSFAEAARRMVGFLRDVERRQGIVVGRLDLGGGLGIPYLPGEKPASTPADLADVLH 274 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 +++ +EPG AI +T V + V VD + + Sbjct: 275 AVVPAGIRLAVEPGRAIAGPSTVAVYEVGTVKGG---FVAVDGGMSDNPRPATYGAVYTA 331 Query: 281 IYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFN 335 + + V G+ C +GD+ E + GD I+ Y + + +N Sbjct: 332 VLASRHSAAPVEPVTVVGKHCESGDVLIEDIALPADLAPGDLIAIPCSGAYQRSTASNYN 391 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + P + + + +R + D Sbjct: 392 LVTRPPVVAVHENAAHAIVRRETEEDLLR 420 >gi|111225300|ref|YP_716094.1| diaminopimelate decarboxylase [Frankia alni ACN14a] gi|111152832|emb|CAJ64577.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Frankia alni ACN14a] Length = 479 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 120/398 (30%), Gaps = 38/398 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + + A K F + +++ + E Sbjct: 69 GTPAFVLDEADFRARCAAWRRAF--SDCDVYYAGKAFLCRAVARWVDEEGLNLDVCTGGE 126 Query: 63 VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F ++ K AV I+ ++ +++++ A + ++ Sbjct: 127 LAVARSVGFPAGRLLFHGNNKSVAELRAAVAYGVGRIVVDSFAEIDRLAAVAAEAGVRQR 186 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + +R+ P V + + G + + + GL H + Sbjct: 187 VLVRVTPGVEAHTHSYVSTGQEDQKFGFSLAGGAAAEAVERVLAAGSLELVGLHAHIGSQ 246 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F M+ + + ++ + LGGG+ + E Sbjct: 247 IFDTAGFGLAAHRMVGLLARVRDTHDLELPELDLGGGLGIAYTSEDAPLEVADVAERLTA 306 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271 + +EPG A+V TT V + E + V VD + ++ Sbjct: 307 VVGKECAAAGLAVPRLGVEPGRAVVGPTTVTLYEVGTVKELPGLRTFVSVDGGMSDNIRT 366 Query: 272 YLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGY 326 L + + + GR C +GD+ V+ GD ++ Y Sbjct: 367 ALYDARYTARLVSRAGSAAAHVVTLVGRHCESGDVVAHDVPLPDDVRPGDLVAVPASGAY 426 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + +N + P + +R + D Sbjct: 427 HRSMASNYNHVTRPPVVAVRDGAARLIVRRETEEDLLR 464 >gi|238754529|ref|ZP_04615883.1| Diaminopimelate decarboxylase [Yersinia ruckeri ATCC 29473] gi|238707160|gb|EEP99523.1| Diaminopimelate decarboxylase [Yersinia ruckeri ATCC 29473] Length = 420 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 115/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + ++ + + A K + + + + S SL E+ Sbjct: 27 PVWAYDGDIIAERINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGH-----EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + D + + ++ L + ++A + Sbjct: 82 RALLAGYQPGKEPAEIVFTADVLDQATLERVVELGIPVNAGSIDMLTQLGEQA--PGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D I + G+ H + Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHHDLAAAITEIGKYSLKLVGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222 + + ++ I IS GGG+ Y + + ++ Sbjct: 199 QHLEQVCDAMVRQVITLGQDISAISAGGGLSIPYQNDEDIIDTEHYYGLWNKARQQIAMH 258 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279 + V + +EPG +V + L V + + ++ V+VD+ + + Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLVAQVRAVKNMGSRHYVLVDAGFNDLMRPAMYGSYHHIS 318 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326 + +++ G C +GDIF E IGD + F D Y Sbjct: 319 VLPADGRDLSHEPLIDSVIAGPLCESGDIFTQQAGGGLETRTLPRPVIGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFENGHPRLIRRRQTIEELVA 416 >gi|227825186|ref|ZP_03990018.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905685|gb|EEH91603.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 421 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 54/393 (13%), Positives = 108/393 (27%), Gaps = 30/393 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ D++ + N G K A+K + L + GT SS Sbjct: 20 PTPFYIYDEKGIRETARKINQAFSWNKGYKEYFAVKATPNPYILKILQEEGCGTDCSSYT 79 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ F G ++ D + I + + ++ + Sbjct: 80 ELLMSKVCGFSGRDIMFSSNDTPDQDYRLAAELGAIINLDDFTMIDTVERLVGIPETICC 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169 + D S+ G +E+ G+ Sbjct: 140 RYNPGGTFALGNDIMDNPG-DSKYGMTKAQLMEAFKILKKKGAKEFGIHAFLASNTVTNE 198 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + + + +I+L GG+ + + + E + ++ Sbjct: 199 YYPELARQLFELAVEVKHETGIAVSFINLSGGVGIPYRPDQTPNDILAIGEGVHRVYDEV 258 Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G + L + K V +D+ + + Sbjct: 259 FGPEGMTDVRLMTEMGRFVTGPYGALIARAIHFKHIYKEYVGLDACAANLIRPAMYGAYH 318 Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + V G C D F ++ GD + D + + Sbjct: 319 HITVLGKENAPCDHKYDVTGGLCENNDKFAVDRMLPEIEEGDYLFLHDAGAHCYAMGYNY 378 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 NG + DGT+K IR + DY+ L Sbjct: 379 NGKLWCAELLLQEDGTVKMIRRAQTPKDYFATL 411 >gi|284032951|ref|YP_003382882.1| diaminopimelate decarboxylase [Kribbella flavida DSM 17836] gi|283812244|gb|ADB34083.1| diaminopimelate decarboxylase [Kribbella flavida DSM 17836] Length = 467 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 59/401 (14%), Positives = 121/401 (30%), Gaps = 42/401 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y++D+ + R + + A K F + + + S E Sbjct: 62 GSPAYVLDEDD--FRTRARAFRRAFKDMDVYYAGKAFLCTTVVRWVMEEGLNLDICSGGE 119 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + + ++ K + A+ + II +++ ++++ A + + Sbjct: 120 LAVALRAGADPSRLGFHGNNKSEQELARALDAGVGRIIVDSLFEIDRLVALAAERGVVAP 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E ++ + GL H + Sbjct: 180 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITSGAAFEAVAKVNQAAELRLLGLHSHIGSQ 239 Query: 169 NKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F ++ + + + LGGG +L K Sbjct: 240 IFDTSGFELAAKRLIALHARVSDELGVDMPELDLGGGFGIAYTTQDDPADPAQLATEMGK 299 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267 +EPG AIV +V + E + V VD + Sbjct: 300 IVEHECRAYGVEVPRVSIEPGRAIVGPAVCTVYSVGTVKEVALDAGASRTYVSVDGGMSD 359 Query: 268 HVPDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 ++ L + + N P A V G+ C +GDI + F V GD ++ Sbjct: 360 NIRTALYDADYSCTLANRSSDATPTLARVVGKHCESGDIVVKDEFLPSDVTPGDLVAVPG 419 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 Y + + +N + P + T +R + +D Sbjct: 420 TGAYCRSMASNYNHVPRPPVIAVKDGRTRVVVRRETEDDLL 460 >gi|309812195|ref|ZP_07705953.1| diaminopimelate decarboxylase [Dermacoccus sp. Ellin185] gi|308433882|gb|EFP57756.1| diaminopimelate decarboxylase [Dermacoccus sp. Ellin185] Length = 455 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 54/408 (13%), Positives = 113/408 (27%), Gaps = 46/408 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK------NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y+ID+ + + + A K F + + + + Sbjct: 44 GTPAYVIDEADVRSRARAYREAFARAFAAIGTQADVYYAGKAFLSSHVAQWVTEEGLRLD 103 Query: 57 SSSLYEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA-- 111 S E+ + GE + K DA+ I+ ++ ++++ D A Sbjct: 104 VCSGGELAIAKKAGVPGENIGMHGNNKGVAEIDDALAYGVGRIVVDSFEEIDRVADAAAR 163 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162 + + +R+ V + G D + ++ G Sbjct: 164 HHITAPVMIRVKLGVEAHTHEFIATAHEDQKFGFSAADGQIGDAVARVLARPELHLLGFH 223 Query: 163 FHNNCEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDF 214 H + + ++ + ++ + LGGG + Sbjct: 224 SHIGSQIFESAGFKEAATRLIALQLQVAKEHGVELPELDLGGGFGIAYLPSDAPLDPAEM 283 Query: 215 CQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIV 261 +L + + +EPG +IV V + + V V Sbjct: 284 ATQLAGIVREACQNADVPVPRVSIEPGRSIVGPGGVTLYRVGTVKLVQASDDLVRTYVSV 343 Query: 262 DSSVEAHVPDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFH-FEKPVKIGD 316 D + + L + N G V G+ C +GD+ F + GD Sbjct: 344 DGGMSDNARPALYQADYHAALANRGGSDELTPTRVVGKHCESGDVVVRDIDFPSDTRDGD 403 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + +N + P + +R + +D Sbjct: 404 LVVVAATGAYCRALASQYNHVPRPPVIAVADGDARVLLRRETIDDLLA 451 >gi|312140420|ref|YP_004007756.1| diaminopimelate decarboxylase lysa [Rhodococcus equi 103S] gi|311889759|emb|CBH49076.1| diaminopimelate decarboxylase LysA [Rhodococcus equi 103S] Length = 447 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 55/396 (13%), Positives = 105/396 (26%), Gaps = 35/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + + ++ A K + D + S E Sbjct: 50 GTPTYVLDEDDVRHRCRAYRTAFPE--AEIAYAAKALTTRAVADWVTSEGLSLDVCSEGE 107 Query: 63 VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + + A E+ + I + + +++ + Sbjct: 108 LAIARSAGVAPSRIILHGNAKTATELRTAVGVGVGRIVVDSHNEIRLLASLARRRQRVLV 167 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCENKS 171 R P + + G + +E + GL H + Sbjct: 168 RATPDIDIHGHPAVTTGVDDQKFGFPINGGHLDAAVRLVLEQPSLELVGLHCHLGSQITD 227 Query: 172 FLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 F M+ +E+ + ++LGGG + RL + Sbjct: 228 VELFASAVDRMIGRMEQIRRDHGVILTNLNLGGGHAVPYLPGDPQIDLTRLAGVLDDALD 287 Query: 228 QIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL 274 + LEPG IV V+ I V + + L Sbjct: 288 EACARNRFPRPGITLEPGRGIVARGGVTLYRVVSIKTGSGGRTFVAVDGGMSDNPRVALY 347 Query: 275 YQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329 N P V GR C AGD+ + GD ++ Y+ Sbjct: 348 GARYDVAVANRHPTGAHMPVTVVGRHCEAGDVLARDVSLPCDLHPGDVLAVPCTGAYHHC 407 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P + + IR + D + Sbjct: 408 LASTYNSVGRPPMVAVRGGSARELIRRETAADLLSR 443 >gi|238758899|ref|ZP_04620071.1| Diaminopimelate decarboxylase [Yersinia aldovae ATCC 35236] gi|238702856|gb|EEP95401.1| Diaminopimelate decarboxylase [Yersinia aldovae ATCC 35236] Length = 421 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 57/400 (14%), Positives = 118/400 (29%), Gaps = 49/400 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + ++ + A K + + + + S SL E+ Sbjct: 27 PVWAYDGDVIAERINQLRQFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 F + D + ++ D + ++ L++ K + Sbjct: 82 RAICAGFQPGQEPAEIVFTADLLDEATLSRVTALDIPVNAGSIDMLDQLGQ--TKRGHPV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G KD ++ + G+ H + Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYKDLPQAIEKVQQYGLTLIGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP------------VKDFCQRLKE 220 + + ++ I IS GGG+ + D +R+ Sbjct: 199 QHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDADKIDTQHYYGLWNDARERIAA 258 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279 + V + +EPG +V + L V + + ++ V+VD+ + L Sbjct: 259 HLG-HPVSLEIEPGRFLVAESGVLIAQVRAVKNMGNRHYVLVDAGFNDLMRPALYGSYHH 317 Query: 280 --------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVA 324 + ++ G C +GD+F E IGD + F D Sbjct: 318 ISLLPADGRDLNSDPLIDTVIAGPLCESGDVFTQEAGGALETRQLPNAHIGDYLVFHDTG 377 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + R + + Sbjct: 378 AYGASMSSNYNSRPLLPEVLFERGVPRLIRRRQTIEELIA 417 >gi|117927837|ref|YP_872388.1| diaminopimelate decarboxylase [Acidothermus cellulolyticus 11B] gi|117648300|gb|ABK52402.1| diaminopimelate decarboxylase [Acidothermus cellulolyticus 11B] Length = 500 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 56/397 (14%), Positives = 116/397 (29%), Gaps = 42/397 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ID+ + + G + A K G+ + G + E Sbjct: 62 GTPCYVIDETDFRSRCRRWRTAFE--GATVYYAAKALLTLGIARWVADEQLGLDVCTGDE 119 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + ++ K A+ + I+ + ++L + +L Sbjct: 120 LAVALRAGVDPARIVFHGNNKSDAELRTALQAGVGRIVIDAFAELRRLAALGAELGVRPD 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + + + + GL H + Sbjct: 180 VLIRVTVGVEAHTHEFIATAHEDQKFGFSLAGGQALAAVTEALGATSLRLVGLHSHIGSQ 239 Query: 169 NKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKE 220 F + ++ ++LGGG+ +F +++ Sbjct: 240 IFDTAGFEVAAHRVVGLLRTIRDQHGIELPELNLGGGVGVAYTADDDPVDVAEFAAQVRA 299 Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEA 267 E+ ++ +EPG AI V + + V VD + Sbjct: 300 IVERECAAAGLAVPRLAVEPGRAIAGPPVLTVYRVGTVKPVDLGGGFVRTYVSVDGGMSD 359 Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFED 322 ++ L N P A V G+ C AGDI F ++ GD ++ Sbjct: 360 NIRAALYDAAYTCALANRRAAGEPILARVVGKHCEAGDIVVRDTFVSADIQDGDLLAVPV 419 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 Y + + +N + P + +R + Sbjct: 420 TGAYCRSLASNYNYLGRPPLVAVRDGRARLLVRRETI 456 >gi|257053752|ref|YP_003131585.1| diaminopimelate decarboxylase [Halorhabdus utahensis DSM 12940] gi|256692515|gb|ACV12852.1| diaminopimelate decarboxylase [Halorhabdus utahensis DSM 12940] Length = 419 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 54/382 (14%), Positives = 111/382 (29%), Gaps = 28/382 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+++ ++ N +++ A K + L ++ E Sbjct: 26 ETPLYVLETGRVQANYRRFDAAF--PDAEVMYAAKAHTGRAVLSALLDVGADIECAARGE 83 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQKLH 115 + E T Y TI ++ + A+ Sbjct: 84 LQRAIEAGADPNTLQYTAVNPPAADLDYAVELADEYPGLTITGGARDTFDRLQ--ARGYD 141 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFHNNCE-- 168 ++ +RINP + ++ G + E ++ GL H Sbjct: 142 GRVAIRINPGIGTGHHEKV-ATGKDAKFGIPAERVPDLAADLRERFDLVGLHAHVGSGVL 200 Query: 169 NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + L + +E++ GGG ++ + ++E Sbjct: 201 TGEVDEHARALGKVADLAREVGDGDLEFVDFGGGFGVPYREDEPPLDIEVVAETVREAVG 260 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI- 281 + + EPG +V + + V + E + V+ VD+S+ + + Sbjct: 261 DLNATMKFEPGRYVVADAELILARVNTVKEAPETTVVGVDASLSTLIRPAMFDSYHPIRN 320 Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P+ V G C + D+F + D ++ + Y N F+ Sbjct: 321 VSAPDRADEAVSVGGPCCTSADVFATDRPIARPEREDILAIGNAGAYGYELANNFHSQPR 380 Query: 340 PTIAVKNVDGTIKAIREFSYND 361 P DG R + D Sbjct: 381 PAEVAIEGDGARIVRRRETMAD 402 >gi|310766546|gb|ADP11496.1| diaminopimelate decarboxylase [Erwinia sp. Ejp617] Length = 417 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 122/396 (30%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + + A K + + + S SL E+ Sbjct: 27 PLWAYDASIISERISQLQQFDV-----VRFAQKACSNVHILRLMRAAGVKVDSVSLGEIE 81 Query: 65 LGHEKF---GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 GG+ + D A ++ + +V L++ + + L Sbjct: 82 RALAAGYQAGGDEIVFTADLLDEATLARVAGLKVPVNAGSVDMLHQLGQVS--AGHPVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174 R+NP + + S+ G +D ++ + G+ H + Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWHEDMALALEAMQKYQLKLVGIHMHIGSGVD-YAH 198 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-K 224 + + + +F ++ IS GGG+ Y R + Sbjct: 199 LEQVCDAMVNQVVNFGQDLQAISAGGGLSIPYHFGEETIDTRHYFGLWDAARQRVERHLG 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA---- 279 + V++ +EPG +V + L + V + + ++ V+VD+ + + Sbjct: 259 HPVKLEIEPGRFLVAESGVLVSQVRAVKNMGSRHFVLVDAGFNDLMRPSMYGSYHHISAI 318 Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 ++V G C +GD+F E V++GD + F D Y Sbjct: 319 AGDGRTLDEMNSVESVVAGPLCESGDVFTQLEGGKVETRALPAVQVGDYLVFHDTGAYGA 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 SMSSNYNSRPLLPEVLFENGQPRQIRRAQTVAELLA 414 >gi|259909546|ref|YP_002649902.1| diaminopimelate decarboxylase [Erwinia pyrifoliae Ep1/96] gi|224965168|emb|CAX56700.1| Diaminopimelate decarboxylase [Erwinia pyrifoliae Ep1/96] Length = 417 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 121/396 (30%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + + A K + + + S SL E+ Sbjct: 27 PLWAYDASIISERISQLQQFDV-----VRFAQKACSNVHILRLMRAAGVKVDSVSLGEIE 81 Query: 65 LGHEKF---GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 GG+ + D A + + +V L++ + + L Sbjct: 82 RALAAGYQAGGDEIVFTADLLDEATLARVAELKVPVNAGSVDMLHQLGQVS--AGHPVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174 R+NP + + S+ G +D ++ + G+ H + Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWHEDMALALEAMQKYQLKLVGIHMHIGSGVD-YAH 198 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-K 224 + + + +F ++ IS GGG+ Y R + Sbjct: 199 LEQVCDAMVNQVVNFGQDLQAISAGGGLSVPYHFGEETIDTRHYFGLWDAARQRVERHLG 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA---- 279 + V++ +EPG +V + L + V + + ++ V+VD+ + + Sbjct: 259 HPVKLEIEPGRYLVAESGVLVSQVRAVKNMGSRHFVLVDAGFNDLMRPSMYGSYHHISAI 318 Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 ++V G C +GD+F E V++GD + F D Y Sbjct: 319 AGDGRALDEMNSVESVVAGPLCESGDVFTQLEGGKVETRALPAVQVGDYLVFHDTGAYGA 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 SMSSNYNSRPLLPEVLFENGQPRQIRRAQTVAELLA 414 >gi|213964601|ref|ZP_03392801.1| diaminopimelate decarboxylase [Corynebacterium amycolatum SK46] gi|213952794|gb|EEB64176.1| diaminopimelate decarboxylase [Corynebacterium amycolatum SK46] Length = 472 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 60/406 (14%), Positives = 123/406 (30%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+Q + + + A + A K F + + + + +S E Sbjct: 61 GTPVFVVDEQDFRSRCRSMAKAFRGAE-NVHYASKAFLSKTIARWVMEEGLHLDVASGNE 119 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F + ++ K A+ + I+ ++ S+L + A + + Sbjct: 120 MAIALAAGFPAKDMTFHGNNKSTAELRDAISAGVGKIVLDSRSELRRLSQVAAEAGVVQD 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 + +R+ P V + G E E + GL H + Sbjct: 180 VLVRVKPGVEAHTHEFIATAHEDQKFGFSLASGSALEASSLVEEDENLRLVGLHCHIGSQ 239 Query: 169 N----KSFLCFSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQ 216 L + +EK T+I + LGGG + V Sbjct: 240 IVDSDGFILAAERVFSLVEKLVERHGTEISEHFNTLDLGGGFGIAYTAGEQPLDVAPLAD 299 Query: 217 RLKEFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + +K + +I + EPG AIV + V + + + + Sbjct: 300 EILTAVDKLAQRIGIAAPTVAVEPGRAIVGPSMVTVYEVGTLKDVTIDDGMTRRYVSVDG 359 Query: 265 -VEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318 + ++ L N V G+ C +GDI + GD Sbjct: 360 GMSDNIRPALYGSNYDGRVVNREVSGSRIPTRVVGKHCESGDILINDANYPSDIVEGDLF 419 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + +N + P + + +R + D + Sbjct: 420 ALAATGAYCYAMASRYNMLTRPPVVSVCDGQVTQILRRETVQDLLS 465 >gi|168186354|ref|ZP_02620989.1| diaminopimelate decarboxylase [Clostridium botulinum C str. Eklund] gi|169295706|gb|EDS77839.1| diaminopimelate decarboxylase [Clostridium botulinum C str. Eklund] Length = 469 Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 82/415 (19%), Positives = 149/415 (35%), Gaps = 55/415 (13%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+Y+ ++++L N+D KN + K+ A K + + + + ++S+YE Sbjct: 52 TPFYVYSEKEILRNIDEIKKAFKNHSNTKIFYASKACSVMKILKIVKESGICVEANSIYE 111 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK-- 117 V E F GE +N K D I ++ +LN ++ +L K Sbjct: 112 VKKCLEIGFKGEQIVFNGVVKKKYELEFAIRNDLYLINVDSFFELNIIEEITNRLKKNAN 171 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170 + +RI P+VS ++ G +D I + + GL H + Sbjct: 172 VCVRIEPNVSSPTHPGLITAFH-AKSGIDLEDAEKMCGRIINMKYVKLKGLHMHVGDQVP 230 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY-------------PVKD 213 + F + + KE + + I++GGGI K D Sbjct: 231 TSEPFRKATEVMVKEAARLERVLNFKFDLINVGGGIPVPYKYEKENAQEDYLYGGINSYD 290 Query: 214 FCQRLKEFSEKYS--VQIYLEPGEAIVTNTTTLNTTV---------------LDISENIK 256 F + K+ ++I +EPG +V+++ L T+V D+ + Sbjct: 291 FASAIINEIHKWRKDIEICIEPGRKVVSSSAVLLTSVSCEKTKTNYDENNNIQDLVDWKF 350 Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH------FEK 310 ++ D+ Y +A+ V G C GD F + Sbjct: 351 VDAGYSILSDSLHFDWYFYLLNASKTNLEYNNWFKVAGPLCDGGDYFHQGVAGEFFALPS 410 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 ++GD ++F D Y I + +N + + N +G + IR SY D Sbjct: 411 NTEVGDILAFLDAGAYTIESQTVYNNRPRTAVVLINKEGKDELIRREDSYEDMVK 465 >gi|13124048|sp|O69203|DCDA_ACTPA RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|3056878|gb|AAC13998.1| diaminopimelate decarboxylase [Actinosynnema pretiosum subsp. auranticum] Length = 437 Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 56/390 (14%), Positives = 118/390 (30%), Gaps = 30/390 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D+ + + +++ A K ++ + S E Sbjct: 49 GTPCQVLDEGTVRA--RARAFREALPEAEVVFAGKALPCREVYRWVADEGLSLDVCSAGE 106 Query: 63 VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F E + + A+ ++ ++ ++ + A+ + Sbjct: 107 LAIARSVGFPAERVLLHGNVKTPEDLKAALGYGVGRVVVDSFDEIEQLGALAEGPQD-VL 165 Query: 120 LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCENK 170 +R+ P V + G E +E + GL H + + Sbjct: 166 VRVTPGVDPRTHRAVATGVEDQKFGFSLAGGDALEAVLRVVEQPSLRLVGLHCHVGSQVR 225 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 + + + +IE + LGGG ++ + F R++ Sbjct: 226 HVAVYEEAARRVVGLIASCGVRIEQLDLGGGFAVPYLPGEGEFDLGGFAHRVRVALSHEC 285 Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES 278 ++ +EPG A+V V + ++ V VD + + L Sbjct: 286 ALRRVPVPRLSIEPGRAVVARAGVTLYRVAAVKRGVRRVFVAVDGGMSDNPRPALYGSRY 345 Query: 279 ATIYPNTGPY--TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFN 335 A G V GR C AGD+ E V+ GD ++ Y+ + +N Sbjct: 346 AVRLVRRGGRRAPVTVVGRHCEAGDVLAEDVPLPEDVRAGDLLAVPVTGAYHHALASNYN 405 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + P + +R + D Sbjct: 406 AVGRPPVVGVRDGVARVLVRRETEEDLLRR 435 >gi|325675970|ref|ZP_08155653.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707] gi|325553208|gb|EGD22887.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707] Length = 447 Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 58/397 (14%), Positives = 112/397 (28%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + + + ++ A K + D + S E Sbjct: 50 GTPTYVLDEDDVRHRCRAYRTAFPES--EIAYAAKALTTRAVADWVTSEGLSLDVCSEGE 107 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + K AV I+ ++ +++ A++ +++ Sbjct: 108 LAIARSAGVDPSRIILHGNAKTATELRTAVGVGVGRIVVDSHTEIRLLASLARR-RQRVL 166 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCENK 170 +R P + + G + +E + GL H + Sbjct: 167 VRATPDIDIHGHPAVTTGVDDQKFGFPINGGHLDAAVRLVLEQPSLELVGLHCHLGSQIT 226 Query: 171 SFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224 F M+ +E+ + ++LGGG + RL + Sbjct: 227 DVELFASAVERMIGRMEQIRRDHGVILTNLNLGGGHAVPYLPGDPQIDLTRLAGVLDDAL 286 Query: 225 ---------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273 I LEPG IV V+ I V + + L Sbjct: 287 DEACARNRFPRPDITLEPGRGIVARAGVTLYRVVSIKTGSGGRTFVAVDGGMSDNPRVAL 346 Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 N P V GR C AGD+ + GD ++ Y+ Sbjct: 347 YGARYDVAVANRHPTGAHMPVTVVGRHCEAGDVLARDVSLPCDLHPGDVLAVPCTGAYHH 406 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N + P + + IR + D + Sbjct: 407 CLASTYNSVGRPPMVAVRGGCARELIRRETAADLLSR 443 >gi|225428410|ref|XP_002283716.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] Length = 423 Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 52/376 (13%), Positives = 99/376 (26%), Gaps = 67/376 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ N + + + A+K + + L + G S E+ Sbjct: 94 PFYLYSKPQITRNFEAYKEALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELR 153 Query: 65 LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 L F +N ++ + ++ L+ A+ + L Sbjct: 154 LALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIAGKKVNVLL 213 Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172 RINP V S+ G D +++ + G H Sbjct: 214 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 273 Query: 173 LCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 F + +I ++++GGG+ Sbjct: 274 DIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDY----------------------- 310 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 L ++ H+ A I T Sbjct: 311 ----------------------YHAGAVLPTPRDLIDTHIELVSPPPSDAQIS------T 342 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 V G C + D G+ G + D Y ++ + +N P DG Sbjct: 343 FDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDDG 402 Query: 350 TIKAIRE-FSYNDYYN 364 ++ IR ++ D+ Sbjct: 403 SMSKIRHGETFEDHVR 418 >gi|28198325|ref|NP_778639.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xylella fastidiosa Temecula1] gi|182680964|ref|YP_001829124.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xylella fastidiosa M23] gi|28056395|gb|AAO28288.1| diaminopimelate decarboxylase [Xylella fastidiosa Temecula1] gi|182631074|gb|ACB91850.1| aspartate kinase [Xylella fastidiosa M23] gi|307579432|gb|ADN63401.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 868 Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 102/362 (28%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ + + A+K + TL + G SL E+ Sbjct: 510 PCYVYHLPTVRERARQLNAVAAVDQC--YYAIKANPHPAILRTLIEEGFGLECVSLGELR 567 Query: 65 LGHEKFG---GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + ++ + + + + + + + LR Sbjct: 568 HVFEVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVEALRLWPEVFR-ERTLWLR 626 Query: 122 INPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 I+ S+ G ++ D ++ V GL H +S + Sbjct: 627 IDLGYGDGHHEKVTTGGKTSKFGLSVTRIDEFIDVAKTLNITVTGLHAHLGSGVESGNHW 686 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFSEKYSVQIY 230 S M + + + +GGG+ + + + Q+ Sbjct: 687 SRMYDELAGFASRIG-SVSTLDIGGGLPIPYRPDDEPFDVGAWGASLAEVKALHPKFQLV 745 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 +EPG +V L T V + E V +++ + + L T Sbjct: 746 IEPGRFLVAEAGVLLTRVTQVIEKDDILRVGLEAGMHTLIRPALYDAWHGVENLTRLDET 805 Query: 290 ----AMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPTIAV 344 V G C + D+FG GD + D Y + + +N +P V Sbjct: 806 PHVLCDVVGPICESSDVFGRRRHLPAATASGDLMLIADAGAYGFSMASTYNLRGLPAEVV 865 Query: 345 KN 346 + Sbjct: 866 LD 867 >gi|304396707|ref|ZP_07378587.1| diaminopimelate decarboxylase [Pantoea sp. aB] gi|304355503|gb|EFM19870.1| diaminopimelate decarboxylase [Pantoea sp. aB] Length = 418 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 110/396 (27%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D Q + + + A K + + + S SL E+ Sbjct: 27 PFWAYDAQIIQARIAQLQ-AFDV----VRFAQKACSNTHILRLMRAAGVKVDSVSLGEIE 81 Query: 65 LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGL 120 GG+ + D ++ + ++ A + L Sbjct: 82 RALAAGYQPGGDEIVFTADLFDQPTLERVT--ALKVPVNAGSIDMLHQLGAVSPGHAVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 R+NP + + S+ G D I+ + G+ H Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWHGDLAEALATIKQYGLQLVGIHMHIGSGVDYAHL 199 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224 +E + IS GGG+ Y R + Sbjct: 200 QQVCDAMVELVMAS-GQDLSAISAGGGLSIPYRYGEEAIDTHHYFGLWDAARQRIAQHLG 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++V++ +EPG +V L + V + ++ V+VD+ + + Sbjct: 259 HAVKLEIEPGRFLVAEAGVLVSQVRAVKSMGSRHFVLVDAGFSDLMRPSMYGSYHHISLM 318 Query: 284 NTGPY--------TAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 +V G C +GD+F E K+GD + F D Y Sbjct: 319 AGDERAIDEQQTIDTVVAGPLCESGDVFTQLEGGMVEPRAIPAAKVGDYLVFHDTGAYGA 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + Sbjct: 379 SMSSNYNSRPLIPEVLFEQGQPREIRRAQTIESLLA 414 >gi|256833011|ref|YP_003161738.1| diaminopimelate decarboxylase [Jonesia denitrificans DSM 20603] gi|256686542|gb|ACV09435.1| diaminopimelate decarboxylase [Jonesia denitrificans DSM 20603] Length = 459 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 56/412 (13%), Positives = 122/412 (29%), Gaps = 50/412 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP + +D+ + A V + A K F + + ++ Sbjct: 44 GTPAFFLDESDFRERAQLFRDAFRAAFSPLGVDVDVYYAGKAFLSIAVARWAHEEGLRID 103 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 ++S+ E+ + G+ + + A+ I+ ++ +++ A+ Sbjct: 104 TASMGEMAVALRAGIPGDHMGLHGNNKSDEERRRAITHRVGRIVIDSPGEIDDIVRVARA 163 Query: 114 L------HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNV 158 L + +R+ + R + G ++ ++ Sbjct: 164 LGRTAADPVPVMVRVTTGIHAGGHDFIATAREDQKFGLSLAGGQALATLTAVLDHPELHL 223 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY----P 210 G H + + F + + + + LGGG Sbjct: 224 LGAHAHIGSQIQDPTAFEVNARKMLTLRADLEHATGYLMPELDLGGGYGIAYTPEETPID 283 Query: 211 VKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN------ 257 V + QRL + +I +EPG +I+ V + + + Sbjct: 284 VPNLAQRLATTLSEVAAELGTTIPRISIEPGRSIIGPAMVTCYRVGVVKPVVTDEGVTRL 343 Query: 258 LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PV 312 V VD + ++ L + A + A V G+ C +GDI + Sbjct: 344 YVSVDGGMSDNIRPALYGAQYTARLANRTGSEQGALARVVGKHCESGDIIIPDVVLPADI 403 Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 GD + YN + + +N + P + T +R + +D Sbjct: 404 GPGDLLVVAATGAYNRSMASNYNNLLKPPVIAVREGHTTVLVRRETEDDLLA 455 >gi|257389205|ref|YP_003178978.1| diaminopimelate decarboxylase [Halomicrobium mukohataei DSM 12286] gi|257171512|gb|ACV49271.1| diaminopimelate decarboxylase [Halomicrobium mukohataei DSM 12286] Length = 413 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 116/385 (30%), Gaps = 28/385 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D ++ N ++ A K + L + ++ E Sbjct: 27 GTPLYVLDVDRVAANYRRFAAAF--PDAHVMYAAKAHTGRAVLSGLLEAGADIECAAAGE 84 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQKLH 115 + T Y + TI ++ +D+ Sbjct: 85 LQRAIDAGADPNTLQYTAVNPPGGDLDYAVDLADEHPGLTITGGAEDTFDRLEDR--GYD 142 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENK 170 ++ +RINP + ++ G + + ++ GL H Sbjct: 143 GRVAIRINPGIGTGHHEKV-ATGKDAKFGIPYDEVPALADDLRDRFDLVGLHAHAGSGVL 201 Query: 171 S--FLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 + + + +E++ GGG ++ ++ +R++E Sbjct: 202 REDLDDHCRAIAKVAELAREVGDSDLEFVDFGGGFGVPYREETEPLDMQAVGERVREAVG 261 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI- 281 S +I LEPG +V + + TTV + E V+ VD+S+ + + Sbjct: 262 DLSARIKLEPGRYVVADAELILTTVNTVKETPATTVVGVDASLATLIRPAMFDSYHPIRN 321 Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P+ P+ + G C + D+F + D ++ + Y N F+ Sbjct: 322 VSAPDRDPHPVSIGGPCCTSADVFATDRPIARPERTDLLAIGNAGAYGYELANQFHSQPR 381 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P R + D Sbjct: 382 PAEVAIEDGDERVVRRRETMADVVR 406 >gi|289829292|ref|ZP_06546904.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 420 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 112/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQDVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYHEGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRYLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|294815814|ref|ZP_06774457.1| Diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294328413|gb|EFG10056.1| Diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 454 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 125/397 (31%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + + R ++ A K F + + D + Q G S E Sbjct: 56 GTPVYVLDEAE--VRARARAWRRALPDADVVYAAKAFLSRAVVDWMEQEGLGLDVCSAGE 113 Query: 63 VMLGHE-KFGGETHA-YNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118 + L F E + A ++ A+ I+ ++ ++ + + Q + Sbjct: 114 LELAASRGFPAERIVLHGNAKSPQDLRTALRLGVGRIVIDSEGEIARLAAQVQGPEPQQV 173 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169 +R+ P + + G E + + GL H + Sbjct: 174 MVRVLPGIEAGGHRKIRTGGEGQKFGLSLANGDAEEAVARVLGQPGLELVGLHCHLGSQI 233 Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQ 216 S + ++ + + + + LGGG Y + + Sbjct: 234 ASPEPYARAVRRLVALLARLRDRHGITLPELDLGGGFAVAYLPGDPAPAPAAYGRRIQDE 293 Query: 217 RLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYL 273 ++ +E L EPG +I+ VL + + + VD + + L Sbjct: 294 LIRSCAESDYPAPRLTVEPGRSIMAPAGVALYRVLAVKRSGGRVFAAVDGGMSDNPRPAL 353 Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNI 328 V GR C AGD+ E ++ GD ++ Y++ Sbjct: 354 YGARYTVRRVGRVSAAPMRATTVVGRHCEAGDVLAESVELPEDLRPGDVLAVPGAGAYHV 413 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N P + + +R ++ D+ + Sbjct: 414 SMASGYNMTGRPPVVAVAEGRSRVLLRRETFEDHRSR 450 >gi|254389440|ref|ZP_05004667.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|326444158|ref|ZP_08218892.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|197703154|gb|EDY48966.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 446 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 125/397 (31%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + + R ++ A K F + + D + Q G S E Sbjct: 48 GTPVYVLDEAE--VRARARAWRRALPDADVVYAAKAFLSRAVVDWMEQEGLGLDVCSAGE 105 Query: 63 VMLGHE-KFGGETHA-YNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118 + L F E + A ++ A+ I+ ++ ++ + + Q + Sbjct: 106 LELAASRGFPAERIVLHGNAKSPQDLRTALRLGVGRIVIDSEGEIARLAAQVQGPEPQQV 165 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169 +R+ P + + G E + + GL H + Sbjct: 166 MVRVLPGIEAGGHRKIRTGGEGQKFGLSLANGDAEEAVARVLGQPGLELVGLHCHLGSQI 225 Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQ 216 S + ++ + + + + LGGG Y + + Sbjct: 226 ASPEPYARAVRRLVALLARLRDRHGITLPELDLGGGFAVAYLPGDPAPAPAAYGRRIQDE 285 Query: 217 RLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYL 273 ++ +E L EPG +I+ VL + + + VD + + L Sbjct: 286 LIRSCAESDYPAPRLTVEPGRSIMAPAGVALYRVLAVKRSGGRVFAAVDGGMSDNPRPAL 345 Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNI 328 V GR C AGD+ E ++ GD ++ Y++ Sbjct: 346 YGARYTVRRVGRVSAAPMRATTVVGRHCEAGDVLAESVELPEDLRPGDVLAVPGAGAYHV 405 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N P + + +R ++ D+ + Sbjct: 406 SMASGYNMTGRPPVVAVAEGRSRVLLRRETFEDHRSR 442 >gi|149197863|ref|ZP_01874912.1| diaminopimelate decarboxylase [Lentisphaera araneosa HTCC2155] gi|149139084|gb|EDM27488.1| diaminopimelate decarboxylase [Lentisphaera araneosa HTCC2155] Length = 418 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 120/392 (30%), Gaps = 31/392 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ ++ + L I G+ A+K + + +SS YEV Sbjct: 21 TPFYVYSQKVIEKQCQAILAIPAPFGLTARYAIKANPNTAILKVIENTGFHFDASSEYEV 80 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + E ++ ++ QL ++ KA +I +R Sbjct: 81 IRCLKAGIAADKIQLTSQEMSSEHLELIIKEGVRFNACSLEQLKRYAAKA-PKGSEISIR 139 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFLCFSA 177 INP + + P S G + ++ + H++ + + Sbjct: 140 INPGLGSGSSRKTNVGGPSSSFGIWFEQVDEVKRFADGCGLRITRLHSHIGSGADPAVWE 199 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----------YSV 227 ++ + ++ ++LGGG V + + + Sbjct: 200 RAASLTLAVARQLPEVTVLNLGGGFKVARHSDEVSTSIEAVGQTVADVLKKEAEETGRKY 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVPDYLLYQESAT--IY 282 + LEPG +V N +L +V DI+ ++ ++ L + Sbjct: 260 HLELEPGTFLVANAGSLVCSVDDITNTGDEGYTFLKINAGMDMLTRPALYAAHHPCLPLS 319 Query: 283 PNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGYNINRK-NWF 334 ++ ++ G C +GD+F E IGD I E Y + + Sbjct: 320 DSSEKVEYVITGHCCESGDLFSVSADDTLEPRSLPKTNIGDTIIIEGAGAYCASMSLKNY 379 Query: 335 NGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365 N + + D IR N Sbjct: 380 NSFPQVAELILDKDDQAHIIRKREEMEQILAN 411 >gi|285017830|ref|YP_003375541.1| bifunctional diaminopimelate decarboxylase/aspartate kinase [Xanthomonas albilineans GPE PC73] gi|283473048|emb|CBA15553.1| putative bifunctional diaminopimelate decarboxylase/aspartate kinase protein [Xanthomonas albilineans] Length = 850 Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 105/365 (28%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ L I + A+K + TL + G S E Sbjct: 487 GTPRYVYHLPTLRERARALKAIAAVD--QRYYAIKANTHPAILQTLVEEGFGLECVSHGE 544 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + E + ++ E +A + T+ + V L ++ A + + Sbjct: 545 LRRVFETLPELSPRRVLFTPSFAPRAEYEAAFALGVTVTLDNVEALQRWP--ALFRGRSL 602 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKC------KDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G + + + G+ H ++ Sbjct: 603 WLRIDLGHGDGHHQKVNTGGKRSKFGLSATRVDEFVEAARALDIRIVGVHAHLGSGVETS 662 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + + + IE I +GGG+ + + Sbjct: 663 EHWRRICDELAGFARRIG-SIEVIDIGGGLPIPYSADDEPFDLDAWAQGLAEVKQVHPGF 721 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATI----Y 282 ++ +EPG +V L + I ++ V +D+ + + L + Sbjct: 722 RLAIEPGRYLVAECGVLLSRATQVIEKDGIRRVGLDAGMNTLIRPALYDAWHDVVNLSRL 781 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C + D+FG D + D Y + +N +P Sbjct: 782 EREADTVFDVVGPVCESSDVFGHRRRLPAETAPDDVMLIADAGAYGYVMASTYNQRELPR 841 Query: 342 IAVKN 346 V + Sbjct: 842 EEVID 846 >gi|71892045|ref|YP_277775.1| diaminopimelate decarboxylase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796151|gb|AAZ40902.1| diaminopimelate decarboxylase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 429 Score = 182 bits (461), Expect = 8e-44, Method: Composition-based stats. Identities = 58/399 (14%), Positives = 125/399 (31%), Gaps = 47/399 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D ++N + + A K + + ++ Y + SL E+ Sbjct: 27 PVWVYDASIIINRITQLKQFDV-----IRYAQKSCSNIHILRLMHNYEVKVDAVSLGEIE 81 Query: 65 LGH-EKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 F E ++ + + + ++ L + A KI Sbjct: 82 RALLAGFKAGKQSNEIVFTADILEEETLLRISELNIVVNAGSIDMLAQLG--ACSPGHKI 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G +D I + GL H + + Sbjct: 140 WLRINPGFGHGHNQKTNTGGENSKHGIWHEDIPIALSYIHHYDLQLIGLHMHIGSGVR-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224 S + + ++ + ++ IS GGG+ + + Sbjct: 199 DHLSKVCNAMVQQILKYKIDVDVISAGGGLTIPYEHNDMVLDVNHYFRLWNNARKYISQY 258 Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 ++V + +EPG +V + L T + + + ++ V++D+ + + Sbjct: 259 LNHTVTLEIEPGRFLVAESGILITQIRAVKNMGNRHFVLIDAGYNDLMRPVMYGSYHHIS 318 Query: 282 YPNTGPYTAM--------VCGRSCLAGDIFGEF--------HFEKPVKIGDRISFEDVAG 325 + + V G C +GDIF + K+GD + F D Sbjct: 319 LVPGDNRSVILETLCDTVVGGPLCESGDIFTQNMNGTILARKLPCSAKVGDYLIFHDTGA 378 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + + + R+ D + Sbjct: 379 YGASMSSNYNTRPLLPEVLFENGQIRQIRRKQKLEDLFM 417 >gi|220913102|ref|YP_002488411.1| diaminopimelate decarboxylase [Arthrobacter chlorophenolicus A6] gi|219859980|gb|ACL40322.1| diaminopimelate decarboxylase [Arthrobacter chlorophenolicus A6] Length = 490 Score = 182 bits (461), Expect = 8e-44, Method: Composition-based stats. Identities = 64/430 (14%), Positives = 125/430 (29%), Gaps = 67/430 (15%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP +++ + +A GV + A K F + + + Sbjct: 57 GTPLFVMSENDFRARARAFSDAFNDAFADICGGVDVYYAGKSFLCTAVVRWVEEEGLRLD 116 Query: 57 SSSLYEVMLG-HEKFGG-ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 ++S E+ + G + + D E A+ I+ +++ +L + AQ Sbjct: 117 TASGGELAVAYRAGIPGADVALHGNNKSDGEIHRALDMGLGRIVVDSLDELARVGAIAQG 176 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------------DKIESEIK 156 K+ LR+ P V + G + Sbjct: 177 RGEQAKVMLRLTPGVHAHTHEFIATAHEDQKFGLSMAADTTDEAGISASEEAVAAATAHP 236 Query: 157 NVN--GLMFHNNCENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYP 210 + GL H + F+ + + + + + + LGGG Sbjct: 237 GIELLGLHCHIGSQIFEPDGFALAAEKLLRFLAAMQEKYSITLPELDLGGGYGIAYTPED 296 Query: 211 VKDFCQ--------RLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVL---------- 249 ++ + + +I +EPG AIV +TT V Sbjct: 297 TPRPAAEIANAMAAVVRSTCAELGIDAPRISIEPGRAIVGSTTFTLYEVGTLKTVRVDAP 356 Query: 250 ---------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 D + V VD + + L + + + N P + V G+ Sbjct: 357 GTSGDGDAGDNVTYPRRYVSVDGGMSDNARPVLYDADYSAVLASRTSNAAPQLSRVVGKH 416 Query: 297 CLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI + V GD ++ Y + +N + P + + +R Sbjct: 417 CESGDIVVRDVYLPEDVAAGDLLAVPGTGAYCWALSSNYNYLARPGVVAVRDGSSRLIVR 476 Query: 356 EFSYNDYYNN 365 + D N Sbjct: 477 GETEEDLLNR 486 >gi|71899469|ref|ZP_00681627.1| Aspartate kinase [Xylella fastidiosa Ann-1] gi|71730782|gb|EAO32855.1| Aspartate kinase [Xylella fastidiosa Ann-1] Length = 868 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 99/362 (27%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ + + + A+K + TL + G SL E+ Sbjct: 510 PCYVYHLPTVRERARQLNSVAAVD--QRYYAIKANPHPAILRTLIEEGFGLECVSLGELR 567 Query: 65 LGHEKFG---GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ + + + + + + + LR Sbjct: 568 HVFAVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVEALRLWPEVFR-DRTLWLR 626 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLCF 175 I+ S+ G K E V GL H + + Sbjct: 627 IDLGYGDGHHEKVTTGGKTSKFGLSVKRIDEFIDVAKTLNITVTGLHAHLGSGVERGNHW 686 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFSEKYSVQIY 230 S M + + + +GGG+ + + + Q+ Sbjct: 687 SRMYDELAGFASRIG-SVSTLDIGGGLPIPYRPDDEPFDVGAWGASLAEVKALHPKFQLV 745 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 +EPG +V L T V + E V +++ + + L + T Sbjct: 746 IEPGRFLVAEAGVLLTRVTQVIEKDDILRVGLEAGMHTLIRPALYDAWHGVENLSRLDET 805 Query: 290 ----AMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPTIAV 344 V G C + D+FG GD + D Y + + +N +P V Sbjct: 806 PHVLCDVVGPICESSDVFGRRRRLPAATASGDLMLIADAGAYGFSMASTYNLRGLPAEVV 865 Query: 345 KN 346 + Sbjct: 866 LD 867 >gi|71276047|ref|ZP_00652328.1| Aspartate kinase [Xylella fastidiosa Dixon] gi|170729669|ref|YP_001775102.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xylella fastidiosa M12] gi|71163130|gb|EAO12851.1| Aspartate kinase [Xylella fastidiosa Dixon] gi|167964462|gb|ACA11472.1| aspartate kinase / diaminopimelate decarboxylase [Xylella fastidiosa M12] Length = 868 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 99/362 (27%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ + + + A+K + TL + G SL E+ Sbjct: 510 PCYVYHLPTVRERARQLNSVAAVD--QRYYAIKANPHPAILRTLIEEGFGLECVSLGELR 567 Query: 65 LGHEKFG---GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ + + + + + + + LR Sbjct: 568 HVFAVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVEALRLWPEVFR-DRTLWLR 626 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLCF 175 I+ S+ G K E V GL H + + Sbjct: 627 IDLGYGDGHHEKVTTGGKTSKFGLSVKRIDEFIDVAKTLNITVTGLHAHLGSGVERGNHW 686 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFSEKYSVQIY 230 S M + + + +GGG+ + + + Q+ Sbjct: 687 SRMYDELAGFASRIG-SVSTLDIGGGLPIPYRPDDEPFDVGAWGASLAEVKALHPKFQLV 745 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 +EPG +V L T V + E V +++ + + L + T Sbjct: 746 IEPGRFLVAEAGVLLTRVTQVIEKDDILRVGLEAGMHTLIRPALYDAWHGVENLSRLDET 805 Query: 290 ----AMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPTIAV 344 V G C + D+FG GD + D Y + + +N +P V Sbjct: 806 PHVLCDVVGPICESSDVFGRRRRLPAATASGDLMLIADAGAYGFSMASTYNLRGLPAEVV 865 Query: 345 KN 346 + Sbjct: 866 LD 867 >gi|10640067|emb|CAC11919.1| diaminopimelate decarboxylase related protein [Thermoplasma acidophilum] Length = 436 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 70/382 (18%), Positives = 132/382 (34%), Gaps = 30/382 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP + + ++++N+ +N V++L ++K + + ++Q G+ S+S E Sbjct: 62 GTPVIIYSRARIVSNIRRIREAYENR-VRMLYSVKANDNPRIIEIMHQESIGSDSASPME 120 Query: 63 VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 +M+ E Y+ + I FNT +Q K ++K ++I Sbjct: 121 IMMSIFSGIPPEDILYSPNNASEYDLNFALDRGIAINFNTFTQYRKMREK----PERISF 176 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF-- 172 RINP +F ++ G I + K G+ N+ Sbjct: 177 RINPGFGMGEFAGTTTGGARTKFGIDPDAAILAYRKAREDGIREFGIHMMIGSNNRDHVK 236 Query: 173 --LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-----KEFSEKY 225 +S + ++ ++ +GGG+ + L KEF + Sbjct: 237 IAEAYSNFFRIADRIGREAGVSFQFADVGGGLGIPYVQGENELDIAALGSAVLKEFDRYH 296 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 + LEPG +V + + TV D+ D + ++ L I Sbjct: 297 FGDLVLEPGRYLVGDAGIIVGTVNDVHNG---FAGTDIGMNLNIRPALYGARHTIIPVGE 353 Query: 286 --GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 V G+ C D G+ + + GDRI D Y + + +NG P Sbjct: 354 RVEGEKITVTGQICENTDRIGDTAW--RLSEGDRIMVLDAGAYVYSMSSRYNGRPRPPEI 411 Query: 344 VKNVDGTIK-AIREFSYNDYYN 364 + DG R ++D+ Sbjct: 412 MIMEDGKDVMIRRREDFSDFIA 433 >gi|308813676|ref|XP_003084144.1| diaminopimelate decarboxylase (ISS) [Ostreococcus tauri] gi|116056027|emb|CAL58560.1| diaminopimelate decarboxylase (ISS) [Ostreococcus tauri] Length = 518 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 60/401 (14%), Positives = 115/401 (28%), Gaps = 42/401 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D L A G+ + A+K + + +SS YE Sbjct: 116 GTPTYVYDAPTLEARAAVAKGFPNAYGLTVRYAMKASPNAAILKIFKKAGLHVDASSGYE 175 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 F G+ + + ++ I ++ QL +F A +IG+R Sbjct: 176 CERAMRAGFAGDEISLSTQELPSFFPELVEKGVRINACSLDQLERFG--AAFPGGEIGVR 233 Query: 122 INPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLCF 175 NP + + P S G K+ + V + H + + Sbjct: 234 FNPGLGSGGTGKTNVGGPSSSFGIWYELLPRVKEIVAEYNLKVVRVHTHIGSGSDPAVWQ 293 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230 + + + ++LGGG Y + ++ + Sbjct: 294 KVSG--MSLDLCREFPDVTTLNLGGGYKVGRMSYEKSTDLAVVGVPVKEAFEKFAEETGR 351 Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV----PDYLLYQESATI 281 +EPG ++ N+ + T V D ++ + L + + Sbjct: 352 KLKLEIEPGTFLLANSCAVVTRVQDKVTTGTAEGHTFLKLDCGMTEVLRPSLYGSQHPLV 411 Query: 282 YP------NTGPYTAMVCGRSCLAGDIF---------GEFHFEKPVKIGDRISFEDVAGY 326 +V G C +GD+ V IGD I E Y Sbjct: 412 SVTKDGTLPETQAEYVVVGHCCESGDLMTPAPDEPETISERTMGEVNIGDFIVIEGSGAY 471 Query: 327 NINRKN-WFNGINMPTIAVKNVDGTIK-AIREFSYNDYYNN 365 + +N ++ G + R+ + + +N Sbjct: 472 CAGMASKNYNSFPEAPEVMRRGAGDMVCIRRKQTLDQILSN 512 >gi|296393110|ref|YP_003657994.1| diaminopimelate decarboxylase [Segniliparus rotundus DSM 44985] gi|296180257|gb|ADG97163.1| diaminopimelate decarboxylase [Segniliparus rotundus DSM 44985] Length = 451 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 57/401 (14%), Positives = 121/401 (30%), Gaps = 41/401 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P +++DK + A K F + + L+Q S E Sbjct: 46 GSPLFVVDKDDFHTRCRRWAEALGPRN--VHYASKAFLSGQLAHWLDQEGLALDVCSGGE 103 Query: 63 VMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F + K AV + ++ ++ ++ + +L + Sbjct: 104 LAIALRGGFPPNRMTLHGNNKSVAELRRAVDVGVEAVVLDSFEEIERLDAACAELGREQD 163 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G E + + + G H + Sbjct: 164 VLVRLTVGVQAHTHEAIATAHEDQKFGFSVASGAAAEAVRRVLARPRLRLIGFHSHIGSQ 223 Query: 169 NKSFLCFSAMLKNIEKEFGH------FITQIEWISLGGGIHFTDK----DYPVKDFCQRL 218 F + + I + + LGGG+ + + + + Sbjct: 224 ILELDGFRLAAQRVAAFADEAVRGFGPIPTLRVLDLGGGLGVAYQLGERPPEPAELAEAV 283 Query: 219 KEFSEKYSVQIYL----EPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEAH 268 ++ E+Y L EPG +I+ + T TV + + I+ V VD + + Sbjct: 284 RKEVEQYPAAARLSVAVEPGRSIMASGTVTLYTVGTVKDVVLEGGAIRKYVSVDGGMSDN 343 Query: 269 VPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDV 323 + L + P + V G+ C GDI V GD ++ Sbjct: 344 IRPALYGAHYDARLVSRAGAAEPAQSRVVGKHCETGDIVVRDCLLPEDVAPGDIVAVAST 403 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + P + + +R + D + Sbjct: 404 GAYCYSLSSRYNALCRPAVVAVEDGRSWLMLRRETEADLLS 444 >gi|88855309|ref|ZP_01129973.1| diaminopimelate decarboxylase [marine actinobacterium PHSC20C1] gi|88815216|gb|EAR25074.1| diaminopimelate decarboxylase [marine actinobacterium PHSC20C1] Length = 467 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 66/405 (16%), Positives = 124/405 (30%), Gaps = 42/405 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK------NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y+ID+ + + VK+ A K F + + Sbjct: 52 GTPVYVIDEADAIARATEIKSAFDSEFARIGSSVKVYYAGKAFLCTEVARWMTAAGLNID 111 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113 +S E+ + ++ K I+ ++V ++ + D A + Sbjct: 112 VASAGEMAVALAAGVDASRLGFHGNNKSLSEIDRAVRAGIGPIVIDSVVEIGRVADAATR 171 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFH 164 +++ LRIN V S R + G + + G+ H Sbjct: 172 HGRTQRVRLRINSGVHASTHEYLATAREDQKFGIPLAEAESVVAQIRSHGSLDFVGIHSH 231 Query: 165 NNCENKSFLCFSAMLKNIEKEFGH--FITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218 + F+ + + + + + ++LGGG L Sbjct: 232 IGSQIFDTAGFAEAAQRLLELHARLAALGPVPELNLGGGFGIAYTSADEALPVAELAASL 291 Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTT------VLDISENIKNLVIVDSSV 265 E I +EPG +I+ +TT T VL E ++ V VD + Sbjct: 292 ASIVQAECARLEIDVPLIAIEPGRSIIGPSTTTLYTAGTIKDVLVDGEAVRKYVSVDGGM 351 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320 ++ L + A P + G+ C AGDI + ++ GD I+ Sbjct: 352 SDNLRTALYGADYSARIANRDSQADPALVRIAGKHCEAGDIIVRAEYLPGDIEPGDIIAV 411 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y N +N + P + +R + +D + Sbjct: 412 PATGAYGWAMSNNYNYLARPPVVAVRDGHARIIVRGETEDDLLSR 456 >gi|54294698|ref|YP_127113.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella pneumophila str. Lens] gi|53754530|emb|CAH16014.1| hypothetical protein lpl1775 [Legionella pneumophila str. Lens] Length = 859 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 107/365 (29%), Gaps = 25/365 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+ + + L A+K + TL + G S+ Sbjct: 500 IHSPCYVYHSPT--QAIRARQLSALESIDSLFYAVKANPFPSILKTLEKEGIGFECVSIQ 557 Query: 62 EVMLGHEKFG---GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117 E+ L + F E + + + +++ L + + +++ Sbjct: 558 ELELVLKLFPNIKKERILFTPNFAPKSEYEFALQTGCYVTIDSLYPLENWPEL--FKNRE 615 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKS 171 + +RI+P S+ G D +S V GL H+ S Sbjct: 616 VIVRIDPGTGAGHHKHVSTGGNESKFGITQNDISKILSLTKSNHIKVIGLHAHSGSGILS 675 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI-- 229 + + ++ I+LGGG+ +K L Q Sbjct: 676 TDLW-QQTAVMLASLTDQFPEVRSINLGGGLGIVEKPGQHPIDFAALDAQLMAVKSQYPG 734 Query: 230 ---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---- 281 +LEPG V + + V E K I +++ + + + L + Sbjct: 735 LAIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEIVNLTR 794 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 A + G C +GD G K GD I + Y + +N Sbjct: 795 LHEEKAGFAHIVGPICESGDTLGYDRLLPVTKEGDVILIANTGAYGHCMSSHYNLRPPAQ 854 Query: 342 IAVKN 346 V Sbjct: 855 EIVLE 859 >gi|291618675|ref|YP_003521417.1| LysA [Pantoea ananatis LMG 20103] gi|291153705|gb|ADD78289.1| LysA [Pantoea ananatis LMG 20103] Length = 425 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 60/396 (15%), Positives = 115/396 (29%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D Q + + + A K + + ++ S SL E+ Sbjct: 36 PFWAYDAQVIQQRIAQLH-AFDV----VRFAQKACSNTHILRLMHSAGVKVDSVSLGEIE 90 Query: 65 LGH-EKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGL 120 F + + D A + + ++ A + L Sbjct: 91 RALVAGFQPDSDEIVFTADVLDNPTLAR--IAELKVPVNAGSVDMLHQLGAVSPGHAVWL 148 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 RINP + + S+ G D IE + G+ H + Sbjct: 149 RINPGFGHGHSQKTNTGGENSKHGIWPSDLPAAQAAIEQYGLRLIGIHMHIGSGVD-YAH 207 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-K 224 + + F +E IS GGG+ Y R + Sbjct: 208 LQQVCDAMVDLVVEFGQDLEAISAGGGLSIPYHYGEEAIDTDHYFGLWDAARQRVADHLG 267 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++V++ +EPG +V + L + V + ++ V+VD+ + + Sbjct: 268 HAVKLEIEPGRFLVAESGVLVSQVRAVKEMGSRHFVLVDAGFSDLMRPSMYGSYHHISVM 327 Query: 284 --------NTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 ++V G C +GD+F E K+GD + F D Y Sbjct: 328 AGDNRAIDEQATIDSVVAGPLCESGDVFTQLEGGKVETRAIPAAKVGDYLVFHDTGAYGA 387 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R D Sbjct: 388 SMSSNYNSRPLIPEILFENGEPREIRRAQRIEDLLA 423 >gi|327395055|dbj|BAK12477.1| diaminopimelate decarboxylase [Pantoea ananatis AJ13355] Length = 425 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 59/396 (14%), Positives = 119/396 (30%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D Q + + + A K + + ++ S SL E+ Sbjct: 36 PFWAYDAQVIQQRIAQLH-AFDV----VRFAQKACSNTHILRLMHSAGVKVDSVSLGEIE 90 Query: 65 LGH-EKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGL 120 F + + D A + + ++ A + L Sbjct: 91 RALVAGFQPDSDEIVFTADVLDNPTLAR--IAELKVPVNAGSVDMLHQLGAVSPGHAVWL 148 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 RINP + + S+ G D IE + G+ H + Sbjct: 149 RINPGFGHGHSQKTNTGGENSKHGIWPSDLPAAQAAIEQYGLRLIGIHMHIGSGVD-YAH 207 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEK------ 224 + + F +E IS GGG+ H+ ++ + ++ Sbjct: 208 LQQVCDAMVDLVVEFGQDLEAISAGGGLSIPYHYGEEAIDTDHYFGLWDTARQRVADHLG 267 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++V++ +EPG +V + L + V + ++ V+VD+ + + Sbjct: 268 HAVKLEIEPGRFLVAESGVLVSQVRAVKEMGSRHFVLVDAGFSDLMRPSMYGSYHHISVM 327 Query: 284 --------NTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 ++V G C +GD+F E K+GD + F D Y Sbjct: 328 AGDNRAIDEQATIDSVVAGPLCESGDVFTQLEGGKVETRAIPAAKVGDYLVFHDTGAYGA 387 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R D Sbjct: 388 SMSSNYNSRPLIPEILFENGEPREIRRAQRIEDLLA 423 >gi|41407084|ref|NP_959920.1| LysA_1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395435|gb|AAS03303.1| LysA_1 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 444 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 54/397 (13%), Positives = 115/397 (28%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ Y R GV+++ A K + + + G S E Sbjct: 48 GTPAYVVDEADFRC--RARRYRRALRGVEVVYAGKSLLSTAVARWAREERLGVDVCSAGE 105 Query: 63 VMLGHEK-FGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + +AV I+ ++ ++ A++ + + Sbjct: 106 LATALAGGVDPARIVMHGNAKSPEELREAVRVGVGRIVLDSTIEIAYLAGLARR-RQPVL 164 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCENK 170 +R+ P + + G + + I ++ GL H + Sbjct: 165 IRVTPDIDIHGHRAVTTGVSDQKFGFTLAGDHAADAVRRVLAHPILDLVGLHCHLGSQVS 224 Query: 171 SF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV----KDFCQRLKEFS 222 M+ + + +++GGG +++ Sbjct: 225 DPALYGEAIRRMIAAMADIRARHGVILTELNIGGGHAIPYASGDPELNLDQLADVIEDAL 284 Query: 223 EKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273 ++ QI +EPG AI V + V + + L Sbjct: 285 DEACAAERFPRPQIVVEPGRAISGRAGVTLYRVCSVKTQGGGRTFVAVDGGMSDNPRVSL 344 Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 A N P V GR C +GD ++ GD ++ Y+ Sbjct: 345 YGARYAVALANRHPLGLKQRVTVAGRHCESGDEIARDVELPADLRPGDLLAVACTGAYHH 404 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + + +R + D Sbjct: 405 SMASNYNMVGRPPLVAVSEGRARELVRRETVADLLAR 441 >gi|281211811|gb|EFA85973.1| group IV decarboxylase [Polysphondylium pallidum PN500] Length = 427 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 57/395 (14%), Positives = 105/395 (26%), Gaps = 32/395 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L ++L N L + A+K + L G SSL Sbjct: 27 TPFHLYHGDRILENGKKMLSAFRQYFPSYTNFFAVKATPNPHILSLLKSIGMGVDCSSLA 86 Query: 62 EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E++L G + E TI + ++Q++ D ++ Sbjct: 87 ELLLAEKVGLKGNEIMFTSNNTPKSEYIKAYELGATINLDDITQIDYLHDALGGKMPEMV 146 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVN--GLMFHNNCENKSFL 173 ++ G + E+ K V+ GL Sbjct: 147 SLRYNPGPLKNGNCFIGKPQEAKFGLTGEQLFEAYAKLKSLGVSRFGLHCMVASNELKLE 206 Query: 174 CFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK- 224 F + + E ++LGGGI + Q + +K Sbjct: 207 YFEETAVLLFETLVAVAKKLDIGFEMVNLGGGIGIPYRLDQTAVDFYRLAQLIDGQFQKI 266 Query: 225 -------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 I E G + L T + + + VD+ + + + Sbjct: 267 VVPAQLKQLPSIVTECGRVVTGPYGVLVTKAIHSKSIYREYIGVDACMANLMRPGMYNAY 326 Query: 278 SATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 ++ + G C D F + D I D + + Sbjct: 327 HYMSVLDSEKRDDQTTKKYDIVGSLCENNDKFAVDRELPVISRDDVIIIHDTGAHGHSMG 386 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 +NG + D R +Y+D + L Sbjct: 387 FNYNGKLRSAEYILLGDQIKCIRRAETYDDLFRTL 421 >gi|55377115|ref|YP_134965.1| ornithine decarboxylase [Haloarcula marismortui ATCC 43049] gi|55229840|gb|AAV45259.1| ornithine decarboxylase [Haloarcula marismortui ATCC 43049] Length = 434 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 53/384 (13%), Positives = 113/384 (29%), Gaps = 30/384 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D ++ N + ++ A K + L + ++ E Sbjct: 50 GTPLYVVDLDRVAENYERFAAAF--PDAHVMYAAKAHTGQAVLSKLLETGADIECAAWGE 107 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQKLH 115 + T Y TI ++ +++ + Sbjct: 108 LQRAIDAGADPNTLQYTAVNPPDRDLDRAVELAAEHPGLTITGGARDTFDRLEER--GYN 165 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFHNNCENK 170 ++ +RINP + ++ G + E ++ GL H Sbjct: 166 GRVAIRINPGIGTGHHEKV-ATGKDAKFGIPYDEVPEVAADVRERFDLVGLHAHAGSGVL 224 Query: 171 SFLCFSAMLK-----NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221 ++ +E +++++ GGG + ++ ++++E Sbjct: 225 HDDLDDHCRAIGKVADMGREVIADGAELDFVDFGGGFGVPYREDVEPLDMEIVGEKVREA 284 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHVPDYLLYQESAT 280 Q+ LEPG +V + + T V + E +V VD+S+ + + Sbjct: 285 VGDLDAQVKLEPGRYVVADAECILTEVNTVKETPAATVVGVDASLATLIRPAMFGSYHPI 344 Query: 281 I---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 P V G C + D+F + D ++ + Y N F+ Sbjct: 345 RNVTAPEREAEPVSVGGPCCTSADVFCTDRPLARPERTDLLAIGNAGAYGYELANQFHSQ 404 Query: 338 NMPTIAVKNVDGTIKAIREFSYND 361 P T + D Sbjct: 405 PRPAEVAFEGGETRVVRERETLAD 428 >gi|168236070|ref|ZP_02661128.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194738024|ref|YP_002115965.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713526|gb|ACF92747.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290650|gb|EDY30004.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 420 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQDVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + +E IS GGG+ + Y R + Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326 N +V G C +GD+F E V GD + D Y Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETCALPAVIPGDYLVLHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416 >gi|283479623|emb|CAY75539.1| lysA [Erwinia pyrifoliae DSM 12163] Length = 445 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 121/396 (30%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + + A K + + + S SL E+ Sbjct: 55 PLWAYDASIISERISQLQQFDV-----VRFAQKACSNVHILRLMRAAGVKVDSVSLGEIE 109 Query: 65 LGHEKF---GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 GG+ + D A + + +V L++ + + L Sbjct: 110 RALAAGYQAGGDEIVFTADLLDEATLARVAELKVPVNAGSVDMLHQLGQVS--AGHPVWL 167 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174 R+NP + + S+ G +D ++ + G+ H + Sbjct: 168 RVNPGFGHGHSQKTNTGGENSKHGIWHEDMALALEAMQKYQLKLVGIHMHIGSGVD-YAH 226 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-K 224 + + + +F ++ IS GGG+ Y R + Sbjct: 227 LEQVCDAMVNQVVNFGQDLQAISAGGGLSVPYHFGEETIDTRHYFGLWDAARQRVERHLG 286 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA---- 279 + V++ +EPG +V + L + V + + ++ V+VD+ + + Sbjct: 287 HPVKLEIEPGRYLVAESGVLVSQVRAVKNMGSRHFVLVDAGFNDLMRPSMYGSYHHISAI 346 Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 ++V G C +GD+F E V++GD + F D Y Sbjct: 347 AGDGRALDEMNSVESVVAGPLCESGDVFTQLEGGKVETRALPAVQVGDYLVFHDTGAYGA 406 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 407 SMSSNYNSRPLLPEVLFENGQPRQIRRAQTVAELLA 442 >gi|188534898|ref|YP_001908695.1| diaminopimelate decarboxylase [Erwinia tasmaniensis Et1/99] gi|188029940|emb|CAO97824.1| Diaminopimelate decarboxylase [Erwinia tasmaniensis Et1/99] Length = 417 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 55/396 (13%), Positives = 117/396 (29%), Gaps = 44/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + + A K + + + S SL EV Sbjct: 27 PVWAYDASIIGERISQLQQFDV-----VRFAQKACSNIHILRLMQSAGVKVDSVSLGEVE 81 Query: 65 LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ-KLHKKIGL 120 GG+ + D A + + ++ + + L Sbjct: 82 RALAAGYQAGGDDIVFTADLLDEPTLARIVG--LKVPVNAGSVDMLHQLGKASAGHPVWL 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLC 174 R+NP + + S+ G + I+ + G+ H + Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWHGDMALALEAIQKYQLKLVGIHMHIGSGVD-YAH 198 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-K 224 + + + F ++ IS GGG+ Y R + Sbjct: 199 LEQVCDAMVSQVIDFGQDLQAISAGGGLSIPYHFGEETIDTQHYFGLWDAARQRVAQHLG 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA---- 279 ++V++ +EPG +V + L + V + + ++ V+VD+ + + Sbjct: 259 HAVKLEIEPGRFLVAESGVLVSQVRAVKNMGSRHFVLVDAGFNDLMRPSMYGSYHHISAI 318 Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 ++V G C +GD+F E V++GD + F D Y Sbjct: 319 AGDGRALDEVNTVESVVAGPLCESGDVFTQREGGKVETRALPAVQVGDYLVFHDTGAYGA 378 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 379 SMSSNYNSRPLLPEVLFENGQPRQIRRAQTVAELLA 414 >gi|311894653|dbj|BAJ27061.1| putative diaminopimelate decarboxylase [Kitasatospora setae KM-6054] Length = 465 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 59/409 (14%), Positives = 116/409 (28%), Gaps = 48/409 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D+ Y R ++L A K F M D + + G S E Sbjct: 55 GTPLYVFDEG--EARARARAYRRALPEAEVLYAAKAFLCTAMADLVAEEGLGLDVCSAGE 112 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L F + D A I+ + ++++ + A + Sbjct: 113 LRLAAAAGFPAGRILLHGNAKSPDELRLARRLGVGRIVLDNLAEIPRLAALATPDRPQRV 172 Query: 120 L-RINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169 L R+ P V+ + G E + + + GL H + Sbjct: 173 LVRVLPGVAAGHHAAVRTGVDGQKFGFSIASGEAAEAVRRTLAQPALRLVGLHCHLGSQI 232 Query: 170 KSFLCFSAML----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DFCQR 217 + + + + + ++ + LGGG + R Sbjct: 233 TDPAPYRTAVDRLVELLARIRDEHAVELPELDLGGGHGVRYLPGDPELTPAAFAAATTAR 292 Query: 218 LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272 L +++ ++ +EPG A+ VL + + VD + + Sbjct: 293 LAARCAEHALAVPKLLIEPGRAVAAPAAVALYRVLAVKHTAEGRAFAAVDGGMSDNPRPA 352 Query: 273 LLYQESATIYPNTGPY---------------TAMVCGRSCLAGDIFGEFHFEK-PVKIGD 316 L P V G C AGD+ ++ GD Sbjct: 353 LYGSAYTVRVLGRAPRLGGGGVVGSGAGPTRPFDVVGCHCEAGDVLARDAPLPADLRPGD 412 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 ++ Y + + +N + P + +R + +D+ Sbjct: 413 LLAVPAAGAYQLAMASGYNLVGRPALVAARDGRARLLVRRETVDDFLAR 461 >gi|54297723|ref|YP_124092.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella pneumophila str. Paris] gi|53751508|emb|CAH12926.1| hypothetical protein lpp1774 [Legionella pneumophila str. Paris] Length = 859 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 105/365 (28%), Gaps = 25/365 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+ ++ L A+K + TL + G S+ Sbjct: 500 IHSPCYVYHSPTQATRARQL-SALESID-SLFYAIKANPFPSILKTLEKEGIGFECVSIQ 557 Query: 62 EVMLGHEKFG---GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117 E+ L + F E + + + +++ L + ++ Sbjct: 558 ELELVLKLFPNIKKERILFTPNFAPKSEYEFALQTGCYVTIDSLYPLENWPKL--FKDRE 615 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS 171 + +RI+P S+ G D ++ V GL H+ S Sbjct: 616 VIVRIDPGTGAGHHKHVSTGGNESKFGITQNDISKILSHTKANHIKVIGLHAHSGSGILS 675 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI-- 229 + + ++ I+LGGG+ +K L Q Sbjct: 676 TDLW-QQTAVMLASLTDQFPEVRSINLGGGLGIVEKPGQHPIDFAALDAQLMAVKSQYPG 734 Query: 230 ---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---- 281 +LEPG V + + V E K I +++ + + + L I Sbjct: 735 LAIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEIINLTR 794 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 A + G C +GD G + GD I + Y + +N Sbjct: 795 LHEEKAGFAHIVGPICESGDTLGYDRLLPVTREGDVILIANTGAYGHCMSSHYNLRPPAQ 854 Query: 342 IAVKN 346 V Sbjct: 855 EIVLE 859 >gi|288818467|ref|YP_003432815.1| ornithine decarboxylase [Hydrogenobacter thermophilus TK-6] gi|288787867|dbj|BAI69614.1| ornithine decarboxylase [Hydrogenobacter thermophilus TK-6] gi|308752057|gb|ADO45540.1| Orn/DAP/Arg decarboxylase 2 [Hydrogenobacter thermophilus TK-6] Length = 390 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 120/357 (33%), Gaps = 18/357 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP L+D + + ++ A+K + L++ G +SL E Sbjct: 38 ETPLLLLDLEGIKRRYKEIE--LYMPNFRIYYAVKANDHTSVIKALSEKGSGFEVASLEE 95 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + K E + K E + + ++ +++ K A++ + Sbjct: 96 LKKVLSLKVEPERIISSNPVKSEEFIDYAYSVHVNRFAVDSFTEVEKIAKVAKRARVYVR 155 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 L + S + + G+ FH + ++ + + Sbjct: 156 LVVPNEGSDWPLSKKF--GVDVDTAIDILEYAREKGLVPYGITFHVGSQCNNYRNWFIAI 213 Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTDKDY-----PVKDFCQ-RLKEFSEKYSVQIY 230 + + + +++ +++GGGI + + + L++F ++ Sbjct: 214 RKSAELWEKAKRRGFRLQMLNMGGGIPVKYTYEALRIEDIAYYIKGLLQKFFPNPPHELQ 273 Query: 231 LEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-Y 288 +EPG IV + + T ++ N +N + VD+ V + + L G Sbjct: 274 IEPGRGIVGDQGIMITRIIGKAKRNDENWLYVDTGVFNGLAEALGGIRYPFYIDREGELK 333 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + G SC + D+ + ++GD + Y + FNG MP + Sbjct: 334 EWTIGGVSCDSMDVIAKMVALPEPEVGDHLYILSAGAYTTVYASNFNGFPMPKVLCL 390 >gi|116671170|ref|YP_832103.1| diaminopimelate decarboxylase [Arthrobacter sp. FB24] gi|116611279|gb|ABK04003.1| diaminopimelate decarboxylase [Arthrobacter sp. FB24] Length = 500 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 62/436 (14%), Positives = 121/436 (27%), Gaps = 73/436 (16%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP +++ + +A GV + A K F + + + Sbjct: 61 GTPLFVMSENDFRARARAFSDAFNDAFADICGGVDVYYAGKSFLCTAVVRWVEEEGLRLD 120 Query: 57 SSSLYE-VMLGHEKFGG-ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 ++S E + G + + D E A+ I+ +++++L + A Sbjct: 121 TASGGELAVAARAGIPGADVALHGNNKSDAEIHRALDMKLGRIVVDSLAELERIAAIASA 180 Query: 114 LHKKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-----------------KIESE 154 + LR+ P V + G + Sbjct: 181 RGETARVMLRLTPGVHAHTHEFIATAHEDQKFGLSMAEDSTDQAGLSAAEEAVAAATGFA 240 Query: 155 IKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + GL H + F +L+ + + + + LGGG Sbjct: 241 GIELLGLHCHIGSQIFEPDGFALAAVKLLRFLAAMQEKYSIVLPELDLGGGYGIAYTPVD 300 Query: 211 VKD--------FCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDIS------- 252 ++ E+ + +I +EPG AIV +T V + Sbjct: 301 TPRPPAEIAQAMAAVVRSTCEELGITAPRISIEPGRAIVGTSTFTLYEVGTLKTVRVDAP 360 Query: 253 ------------------ENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTA 290 + V VD + + L + + I P + Sbjct: 361 AAADGAAADQAGNTAKNVTYPRRYVSVDGGMSDNARPVLYDADYSAIVASRTSGAAPQLS 420 Query: 291 MVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 V G+ C +GDI + V GD ++ Y + +N + P + Sbjct: 421 RVVGKHCESGDIVVRDVYLPEDVAAGDLLAVPGTGAYCWALSSNYNYLARPGVVAVRDGS 480 Query: 350 TIKAIREFSYNDYYNN 365 +R + D N Sbjct: 481 ARLIVRGETEQDLLNR 496 >gi|300865977|ref|ZP_07110713.1| Diaminopimelate decarboxylase [Oscillatoria sp. PCC 6506] gi|300336043|emb|CBN55871.1| Diaminopimelate decarboxylase [Oscillatoria sp. PCC 6506] Length = 412 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 56/380 (14%), Positives = 121/380 (31%), Gaps = 19/380 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ +L LD V+ A + + Q G +++ + Sbjct: 30 GSPLYVYQGDRLRQTLDRIARSIDYPQVQFHFASVTNGNIALLQLIQQAGWGLHANTPGD 89 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 V LG F + Y + + N + F+++SQL+ F D ++ + I Sbjct: 90 VFLGLKAGFTSDRIVYTGSNLSRVDIQQLLDWNINRFNFDSLSQLHDFCDCSRSQARSIH 149 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 I ++ + +K + + GL F+ + F + Sbjct: 150 SEIGLRLNSPELTGDSRIGVRPAEFDKANAIAQQHGFKITGLHFYRGTGTNATSAFIDAI 209 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRL--KEFSEKYSVQIYLEPG 234 + + + GGG + + ++F + K + + +++ +EPG Sbjct: 210 DRV-VAIAQQLPDWRSLDFGGGFGYPYRGGAAFDWREFGTAITQKLTARSHPIELVIEPG 268 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG------- 286 A + + V+ + ++ + A++ + A Sbjct: 269 RAAIAGCGVMLAKVVSVKWQCDRQIVGVDTTVANLSVPAVHGGYRAIAVWENESSLGDST 328 Query: 287 --PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 Y +CG + + D G + +KIGD I+ D Y + F P + Sbjct: 329 RSRYQTDICGNTTYSRDYLGRNCWLPSLKIGDAIAILDSGAYGYAMSSHFLHRPRPAEVL 388 Query: 345 KNVDGTIKAIREFSYNDYYN 364 + + Y+ N Sbjct: 389 IEGNHHRLIRQREDYSILLN 408 >gi|326403276|ref|YP_004283357.1| diaminopimelate decarboxylase [Acidiphilium multivorum AIU301] gi|325050137|dbj|BAJ80475.1| diaminopimelate decarboxylase [Acidiphilium multivorum AIU301] Length = 438 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 52/388 (13%), Positives = 109/388 (28%), Gaps = 27/388 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ + L G + A+K + + G +S Sbjct: 44 GTPTWVYSAATIEGRLAALRAAFAGEGLAPAIRYAVKANDHLAILGLVRAGGAGADVTSA 103 Query: 61 YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E ++ +D A+ + + + +L A + Sbjct: 104 GEFARAEAAGIAPGAMVFSGVGKREDELRRALAAGIGQLNVESAEELEMISGIAAAMGVA 163 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-----NVNGLMFHNNCENK 170 + LR+NP V+ R + G D + + F + ++ Sbjct: 164 APVALRVNPDVAAGGHDKISTGRKGDKFGIGFDDAGALYRHAAALPGIEAVGFSTHIGSQ 223 Query: 171 SFLCFSAMLKNIEK-----EFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222 F + + + LGGG D +P ++ Sbjct: 224 IFAPAAFEAAYRRVLGLIGALRGEGLAVRRLDLGGGFGIPYDDGTAFPFAAQAAMVRRVL 283 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATI 281 + +++ +EPG +V L V + + V++D+ + + L + Sbjct: 284 GGHDLELIVEPGRWLVGPAGVLLARVTLVKRAGAERFVVLDAGMNDLIRPALYGARHGIV 343 Query: 282 -----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 P A V G C + D FG + G ++ D Y + +NG Sbjct: 344 PVGAADAAGAPAPAEVVGPVCESSDRFGTHD-LPELAPGALVALLDAGAYGATMSSTYNG 402 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364 + R + ++ + Sbjct: 403 RPFAAQVMIADGAPQLIRRRQALDELWR 430 >gi|325963845|ref|YP_004241751.1| diaminopimelate decarboxylase [Arthrobacter phenanthrenivorans Sphe3] gi|323469932|gb|ADX73617.1| diaminopimelate decarboxylase [Arthrobacter phenanthrenivorans Sphe3] Length = 491 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 66/430 (15%), Positives = 127/430 (29%), Gaps = 67/430 (15%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP +++ + NA GV + A K F + + + Sbjct: 58 GTPLFVMSENDFRARARAFSDAFNNAFADVCGGVDVYYAGKSFLCTAVVRWVEEEGLRLD 117 Query: 57 SSSLYE-VMLGHEKFGG-ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 ++S E + G + + D E A+ I+ +++ +L + D A++ Sbjct: 118 TASGGELAVAAKAGIPGADVALHGNNKSDGEIHRALDMKLGRIVVDSLGELVRVGDIAER 177 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLG-----EKCKDK----------IESEIK 156 K+ LR+ P V + G + + S Sbjct: 178 RGEQAKVMLRLTPGVHAHTHEFIATAHEDQKFGLSMAADTTEQAGLSAAEEAVAAASAHP 237 Query: 157 NVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYP 210 + GL H + F+ + + + + + + LGGG Sbjct: 238 GIELLGLHCHIGSQIFEPEGFAMAAEKLLRFLAAMQEKYSIVLPELDLGGGYGIAYTPVD 297 Query: 211 VKDFCQ--------RLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE------ 253 ++ + S +I +EPG AIV +TT V + Sbjct: 298 TPRPAAEIAEAMAAVVRSTCAELGIDSPRISIEPGRAIVGSTTFTLYEVGTLKTVRVDAP 357 Query: 254 -------------NIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296 + V VD + + L + + I + P + V G+ Sbjct: 358 AEPGASDGGNNVTYPRRYVSVDGGMSDNARPVLYDADYSAILASRTSSAAPQLSRVVGKH 417 Query: 297 CLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI + V GD ++ Y + +N + P + +R Sbjct: 418 CESGDIVVRDVYLPEDVAAGDLLAVPGTGAYCWALSSNYNYLARPGVVAVRDGSARLIVR 477 Query: 356 EFSYNDYYNN 365 + D N Sbjct: 478 GETEEDLLNR 487 >gi|254774026|ref|ZP_05215542.1| diaminopimelate decarboxylase [Mycobacterium avium subsp. avium ATCC 25291] Length = 446 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 54/397 (13%), Positives = 115/397 (28%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ Y R GV+++ A K + + + G S E Sbjct: 50 GTPVYVVDEADFRC--RARRYRRALRGVEVVYAGKSLLSTAVARWAREERLGVDVCSAGE 107 Query: 63 VMLGHEK-FGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + +AV I+ ++ ++ A++ + + Sbjct: 108 LATALAGGVDPARIVMHGNAKSPEELREAVRVGVGRIVLDSTIEIAYLAGLARR-RQPVL 166 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCENK 170 +R+ P + + G + + I ++ GL H + Sbjct: 167 IRVTPDIDIHGHRAVTTGVSDQKFGFTLAGDHAADAVRRVLAHPILDLVGLHCHLGSQVS 226 Query: 171 SF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV----KDFCQRLKEFS 222 M+ + + +++GGG +++ Sbjct: 227 DPALYGEAIRRMIAAMADVRARHGVILTELNIGGGHAIPYASGDPELNLDQLADVIEDAL 286 Query: 223 EKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273 ++ QI +EPG AI V + V + + L Sbjct: 287 DEACAAERFPRPQIVVEPGRAISGRAGVTLYRVCSVKTQCGGRTFVAVDGGMSDNPRVSL 346 Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNI 328 A N P V GR C +GD ++ GD ++ Y+ Sbjct: 347 YGARYAVALANRHPLGLKQRVTVAGRHCESGDEIARDVGLPADLRPGDLLAVACTGAYHH 406 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + + +R + D Sbjct: 407 SMASNYNMVGRPPLVAVSEGRARELVRRETVADLLAR 443 >gi|118464302|ref|YP_880409.1| diaminopimelate decarboxylase [Mycobacterium avium 104] gi|118165589|gb|ABK66486.1| diaminopimelate decarboxylase [Mycobacterium avium 104] Length = 444 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 54/397 (13%), Positives = 115/397 (28%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ Y R GV+++ A K + + + G S E Sbjct: 48 GTPVYVVDEADFRC--RARRYRRALRGVEVVYAGKSLLSTAVARWAREERLGVDVCSAGE 105 Query: 63 VMLGHEK-FGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + +AV I+ ++ ++ A++ + + Sbjct: 106 LATALAGGVDPARIVMHGNAKSPEELREAVRVGVGRIVLDSTIEIAYLAGLARR-RQPVL 164 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCENK 170 +R+ P + + G + + I ++ GL H + Sbjct: 165 IRVTPDIDIHGHRAVTTGVSDQKFGFTLAGDHAADAVRRVLAHPILDLVGLHCHLGSQVS 224 Query: 171 SF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV----KDFCQRLKEFS 222 M+ + + +++GGG +++ Sbjct: 225 DPALYGEAIRRMIAAMADVRARHGVILTELNIGGGHAIPYASGDPELNLDQLADVIEDAL 284 Query: 223 EKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273 ++ QI +EPG AI V + V + + L Sbjct: 285 DEACAAERFPRPQIVVEPGRAISGRAGVTLYRVCSVKTQCGGRTFVAVDGGMSDNPRVSL 344 Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNI 328 A N P V GR C +GD ++ GD ++ Y+ Sbjct: 345 YGARYAVALANRHPLGLKQRVTVAGRHCESGDEIARDVGLPADLRPGDLLAVACTGAYHH 404 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N + P + + + +R + D Sbjct: 405 SMASNYNMVGRPPLVAVSEGRARELVRRETVADLLAR 441 >gi|85702213|ref|NP_001030044.1| ornithine decarboxylase-like [Mus musculus] gi|74180789|dbj|BAE25605.1| unnamed protein product [Mus musculus] gi|187466332|emb|CAQ51836.1| novel protein similar to ornithine decarboxylase, structural 1 Odc1 [Mus musculus] gi|220939007|emb|CAM45915.2| novel protein similar to ornithine decarboxylase, structural 1 Odc1 [Mus musculus] gi|223461739|gb|AAI47396.1| Gene model 853, (NCBI) [Mus musculus] gi|223462101|gb|AAI47395.1| Gene model 853, (NCBI) [Mus musculus] Length = 425 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 105/361 (29%), Gaps = 25/361 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + + D L++ T L V+ A+KC + + L G +S E+ Sbjct: 52 FMVADLDVLVSRHRTFLQALPR--VQPFYAVKCNSNPWVLLVLAALGTGFDCASQGELEQ 109 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + K + C + ++ K ++ LRI Sbjct: 110 VLGLGVAPSRIIFANPCKAVSHIQFAARCGVQLLTFDNEEELIKLARYHPRARLVLRIQT 169 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S F L V G FH + + + + + + Sbjct: 170 LDSQSTFPLHTKFGAHLEACGHLLQVARELGLAVVGASFHVGSDCHTPESYRQAIADCHR 229 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGE 235 F + + LGGG + R+ + F E+ +++ EPG Sbjct: 230 VFEMGCKAGHHMSLLDLGGGFPGVKGSEAKFEEVARVINTALAQYFPEETGIEVIAEPGR 289 Query: 236 AIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 + T ++ + D + + Sbjct: 290 FYAGSVCTAAVNIIVKKSSLDPGGHRKLAYYLNEGHYGVFRLFLRDPVPRIPIVVKEFPS 349 Query: 286 GP--YTAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 P + + G +C A D +F + +GD + F D+ Y+ + + FNG + T+ Sbjct: 350 EPPLFPCTLYGPTCDAYDRLFSTEVQLPELDVGDWLIFPDMGAYSSSMSSTFNGFPIATV 409 Query: 343 A 343 Sbjct: 410 Y 410 >gi|254821292|ref|ZP_05226293.1| LysA_2 [Mycobacterium intracellulare ATCC 13950] Length = 472 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 55/406 (13%), Positives = 121/406 (29%), Gaps = 45/406 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + G + A K F + +++ + E Sbjct: 64 GTPLFVVDEDDFRSRCREIASAFGG-GKNVHYAAKAFLCSEIARWIDEEGLSLDVCTGGE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F E ++ K AV + ++ ++++++ + A + Sbjct: 123 LAVALHANFPPERITFHGNNKSVAELTAAVKAGVGHVVLDSMTEIERLNTIAGEAGIVQD 182 Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 + + V + G E+E V GL H + Sbjct: 183 VFVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAALAAVGRVFEAEHLRVVGLHSHIGSQ 242 Query: 169 NKSFLCFSAM--------LKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQ 216 F + +E+ QI + LGGG+ + P+ + Sbjct: 243 IFDVAGFELAARRVLGLLHEAVEQFGVEKTAQISTVDLGGGLGISYLAADDPPPMGELAA 302 Query: 217 RLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 +L + + ++ +EPG AI T V + + + Sbjct: 303 KLSAIVKNESEAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 362 Query: 265 -VEAHVP----DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318 + ++ D + + A V G+ C +GDI + + GD I Sbjct: 363 GMSDNIRTALYDAQYDARLVSRLSDAPAELARVVGKHCESGDIVVRDTWVPGDLHPGDLI 422 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + + +N + P + +R + +D + Sbjct: 423 GVAATGAYCYSLSSRYNMVCRPAVVAVRDRRARLLLRRETVDDLLS 468 >gi|15837718|ref|NP_298406.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xylella fastidiosa 9a5c] gi|9106073|gb|AAF83926.1|AE003947_6 bifunctional diaminopimelate decarboxylase/aspartate kinase [Xylella fastidiosa 9a5c] Length = 868 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 103/362 (28%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ + + + A+K + TL + G SL E+ Sbjct: 510 PCYVYHLPTVRERARQLNAVAAVD--QRYYAIKANPHPAILRTLIEEGFGLECVSLGELR 567 Query: 65 LGHEKFG---GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ + + + + + + + LR Sbjct: 568 HVFAVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVEALRLWPEVFR-DRTLWLR 626 Query: 122 INPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 I+ S+ G ++ D ++ V GL H + + Sbjct: 627 IDLGYGDGHHEKVTTGGKTSKFGLSVTRIDEFIDVAKTLNIIVTGLHAHLGSGVERGDHW 686 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-----YSVQIY 230 S M + + + +GGG+ + + + +Q+ Sbjct: 687 SRMYDELAGFASRIG-SVSTLDIGGGLPIPYRPDDEPFDVEAWGVSLAEVKALHPKLQLV 745 Query: 231 LEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNT 285 +EPG +V L T V I ++ V +++ + + L + Sbjct: 746 IEPGRFLVAEAGVLLTRVTQVIEKDGIRRVGLEAGMHTLIRPALYDAWHDVENLSRLDEI 805 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPTIAV 344 V G C + D+FG GD + D Y + + +N +P V Sbjct: 806 PHVLCDVVGPICESSDVFGRCRHLPAATASGDLMLIADAGAYGFSMASTYNLRGLPAEVV 865 Query: 345 KN 346 + Sbjct: 866 LD 867 >gi|319760400|ref|YP_004124338.1| diaminopimelate decarboxylase [Candidatus Blochmannia vafer str. BVAF] gi|318039114|gb|ADV33664.1| diaminopimelate decarboxylase [Candidatus Blochmannia vafer str. BVAF] Length = 428 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 65/403 (16%), Positives = 121/403 (30%), Gaps = 50/403 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-- 62 P ++ D ++N + + A K + + + + SL E Sbjct: 28 PVWIYDSSIIINRITQLRQFD-----IIRFAQKSCSNIHILKLMYNNGVKIDAVSLGEIE 82 Query: 63 -VMLGHEKFGGET--HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 +L KFG E + + E + I N S + + ++ Sbjct: 83 RALLAGFKFGKEKSEIIFTADILEEETL-LKILELKIPVNIGSIDMIIQLGSCSPGHEVW 141 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFL 173 +RINP Y + S+ G +D + + GL H Sbjct: 142 MRINPGFGYGHNNKTNTGGENSKHGIWYEDVPIALFYMRRYNLKLTGLHMHIGSGVHYSH 201 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---------- 223 +E+ + ++ IS GGG+ K R + Sbjct: 202 LSKVSTVMVEQIL-KYKIDLKVISCGGGLTIPYKFTDQVVNVNRYFNIWDHARKSISKYL 260 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA--- 279 K+S+Q+ +EPG +V + L T + I + +D+ + + Sbjct: 261 KHSIQLEIEPGRFLVAESGILVTQIRAIKTTGSRRFVLIDAGYNDLMRPVMYGSYHHISI 320 Query: 280 ----------TIYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKP-VKIGDRISFE 321 I +V G C AGD+F + VK+GD + F Sbjct: 321 VFGERNSNDKDICLGEELSDVVVGGPLCEAGDVFTQGANGEILSRKLPDSVKVGDYLIFH 380 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 D Y + + +N + + + R+ D + Sbjct: 381 DTGAYGASMSSNYNTRPLLPEVLLEDGKIREIRRKQKLEDLFA 423 >gi|254415374|ref|ZP_05029135.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Microcoleus chthonoplastes PCC 7420] gi|196177849|gb|EDX72852.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Microcoleus chthonoplastes PCC 7420] Length = 391 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 55/377 (14%), Positives = 121/377 (32%), Gaps = 15/377 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ +L + + Y + A + Q G ++ + Sbjct: 12 GSPLYVYQGDRLRDTIHYITYAVPYPRTRFQFASVTNGNIALLQIFQQEGWGLHGNTPGD 71 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK-I 118 + LG F + Y+ + + + + + +++SQL+ Q L K Sbjct: 72 IYLGLKAGFAPDKIVYSGSNLNYPEMEQVLHWGITTLNLDSISQLDLCCQVYQSLTPKLP 131 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 L + ++ + + +S + G+ F+ + F+ + Sbjct: 132 RLNLGLRLNVPELTGDSRIGVRPKEFPDALKITQSAGLQLQGIHFYRGTGTNATKAFTQV 191 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK--YSVQIYLE 232 + E G + +++ GGG + + + + F Q + + E + + +E Sbjct: 192 ID-SLCEIGQQLPDWDYLDFGGGFGYPYQGNGVTFDWQGFGQAITQKLETIGRPIDLIIE 250 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNT---GPY 288 PG A + +L V+ + ++ + A++ + I Y Sbjct: 251 PGRAAIAGCASLLAKVVSVKWQNGKQIVGVDTTVANLSVPSVHGGYRKIISFTDNQGEQY 310 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 VCG + + D G +KIGD I+ D Y + F P + Sbjct: 311 PTDVCGNTTYSRDYLGRNCQLPALKIGDVIAILDSGAYGYAMSSHFLHRPRPAEVLVEQG 370 Query: 349 GTIKAIREFSYNDYYNN 365 + Y+ N Sbjct: 371 THRLIRKREDYSVLLKN 387 >gi|322368446|ref|ZP_08043015.1| diaminopimelate decarboxylase [Haladaptatus paucihalophilus DX253] gi|320552462|gb|EFW94107.1| diaminopimelate decarboxylase [Haladaptatus paucihalophilus DX253] Length = 425 Score = 179 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 67/397 (16%), Positives = 123/397 (30%), Gaps = 35/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTS--- 57 +P Y + L N T ++ A+K G+ L + Sbjct: 22 GSPLYAFFEDDLRANYGTLRDALDEQYPNSEVHFAVKANYNLGVLSVLRDAGCKAEAYAR 81 Query: 58 SSLYEVMLGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 L F E + A+ ++ + ++L K A+ Sbjct: 82 CELTATRRA--GFDPEDVLLTGMNRAPEDIERALDWGVSHLLVDNATELEKILVAAEATE 139 Query: 116 KKIGLRI--NPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFH 164 + I NP++ S+ G + +ESE ++ G+ H Sbjct: 140 TVPDMLIRGNPAMEVPTHPEVATATRESKFGLDIESGRAMAVARQAVESEFVSLAGVQLH 199 Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK------DF 214 + + + ML +I+ + LGGG + Sbjct: 200 VGSQIRGVEPYGVAGREMLGFAADVRDELGVEIDVLDLGGGFPVPYDEDVPDTETIVAHM 259 Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD 271 + ++E +Y ++++EPG +V N T TV + E V V Sbjct: 260 AETIRETCAQYDLDEPRLFVEPGRRLVGNAGTFLGTVGVVKETPYADFAVLDGGTNAVSS 319 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 Y Y A + T V G C +GD+ E + GD ++ + + Y++ Sbjct: 320 YWPYPVYA-VKDREPTRTYHVAGPLCYSGDVLSEDVPLPELGPGDLVAVDRIGAYSLGSA 378 Query: 332 NWFNGINMPTIAVKNVDGTI-KAIREFSYNDYYNNLS 367 + N P + + DG + S +D N S Sbjct: 379 SHTNAEPKPPVVLVRSDGGYDLLRKRESCDDVLGNDS 415 >gi|58040374|ref|YP_192338.1| diaminopimelate decarboxylase [Gluconobacter oxydans 621H] gi|58002788|gb|AAW61682.1| Diaminopimelate decarboxylase [Gluconobacter oxydans 621H] Length = 424 Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 116/389 (29%), Gaps = 26/389 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP ++ + L + V + A+K L Q G S Sbjct: 21 VGTPCWITGAETLRRRAKALRAAFEARNLPVNMHFAMKSQDHQATLTILRQCGYGVDIVS 80 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK 116 E+ ++ K D I +V +L + D A+ + Sbjct: 81 GGEMQRALHAGISPSGIVFSGVGKSDAELRAAVEHDIAQINVESVEELYRLDDIARACGR 140 Query: 117 KIG--LRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNC 167 LR+NP V R + G + + + + + GL H Sbjct: 141 VARAALRVNPDVDADTHDKISTGRAGDKFGIEHRRAVALYGEAASLKNVRLVGLAVHLGS 200 Query: 168 EN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEF 221 + F + L ++ +E +E + GGG+ +D L E Sbjct: 201 QMLTAGPFREGYSRLADMVREIRAAGHTVEAVDCGGGLGIRYRDEIAPSPDMLAGVLAET 260 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 V++ +EPG + T L T V++ + V++D+++ L + Sbjct: 261 LGDLDVRLSIEPGRWLSAPTGILLTRVIETKAGNPDFVVLDAAMNDLARPSLYESWHGIM 320 Query: 282 YPNTG-----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFN 335 + G C + DIF K GD I+ D Y + +N Sbjct: 321 PVAPNGLTSLTKLWDIVGPVCESSDIFARDRALPADTKRGDLIALLDTGAYGSVMSSTYN 380 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + + S + Sbjct: 381 TRPLAAQVLIDNGKWEIIRQRQSVAELIA 409 >gi|148359357|ref|YP_001250564.1| hypothetical protein LPC_1255 [Legionella pneumophila str. Corby] gi|296107404|ref|YP_003619104.1| aspartate kinase [Legionella pneumophila 2300/99 Alcoy] gi|148281130|gb|ABQ55218.1| hypothetical protein LPC_1255 [Legionella pneumophila str. Corby] gi|295649305|gb|ADG25152.1| aspartate kinase [Legionella pneumophila 2300/99 Alcoy] gi|307610512|emb|CBX00096.1| hypothetical protein LPW_18421 [Legionella pneumophila 130b] Length = 853 Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 105/365 (28%), Gaps = 25/365 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+ ++ L A+K + TL + G S+ Sbjct: 494 IHSPCYVYHSPTQATRARQL-SALESID-SLFYAIKANPFPTILKTLEKEGIGFECVSIQ 551 Query: 62 EVMLGHEKFG---GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117 E+ L + F E + + + +++ L + D ++ Sbjct: 552 ELELVLKLFPNIKKERILFTPNFAPKSEYEFALQTGCYVTIDSLYPLENWPDL--FKDRE 609 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKS 171 + +RI+P S+ G D + V GL H+ S Sbjct: 610 VIVRIDPGTGAGHHKHVSTGGNESKFGITQNDISKILSLTKVNHIKVIGLHAHSGSGILS 669 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI-- 229 + + ++ I+LGGG+ +K L Q Sbjct: 670 TDLW-QQTAVMLASLTDQFPEVRSINLGGGLGIVEKPGQHPIDFAALDAQLMAVKSQYPG 728 Query: 230 ---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---- 281 +LEPG V + + V E K I +++ + + + L + Sbjct: 729 LAIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEIVNLTR 788 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 A + G C +GD G + GD I + Y + +N Sbjct: 789 LHEEKAGFAHIVGPICESGDTLGYDRLLPVTREGDVILIANTGAYGHCMSSHYNLRPPAQ 848 Query: 342 IAVKN 346 V Sbjct: 849 EIVLE 853 >gi|52842038|ref|YP_095837.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629149|gb|AAU27890.1| aspartokinase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 859 Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 105/365 (28%), Gaps = 25/365 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P Y+ ++ L A+K + TL + G S+ Sbjct: 500 IHSPCYVYHSPTQATRARQL-SALESID-SLFYAIKANPFPTILKTLEKEGIGFECVSIQ 557 Query: 62 EVMLGHEKFG---GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117 E+ L + F E + + + +++ L + D ++ Sbjct: 558 ELELVLKLFPNIKKERILFTPNFAPKSEYEFALQTGCYVTIDSLYPLENWPDL--FKDRE 615 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKS 171 + +RI+P S+ G D + V GL H+ S Sbjct: 616 VIVRIDPGTGAGHHKHVSTGGNESKFGITQNDISKILSLTKVNHIKVIGLHAHSGSGILS 675 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI-- 229 + + ++ I+LGGG+ +K L Q Sbjct: 676 TDLW-QQTAVMLASLTDQFPEVRSINLGGGLGIVEKPGQHPIDFAALDAQLMAVKSQYPG 734 Query: 230 ---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---- 281 +LEPG V + + V E K I +++ + + + L + Sbjct: 735 LAIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEIVNLTR 794 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 A + G C +GD G + GD I + Y + +N Sbjct: 795 LHEEKAGFAHIVGPICESGDTLGYDRLLPVTREGDVILIANTGAYGHCMSSHYNLRPPAQ 854 Query: 342 IAVKN 346 V Sbjct: 855 EIVLE 859 >gi|118442987|ref|YP_878189.1| diaminopimelate decarboxylase [Clostridium novyi NT] gi|118133443|gb|ABK60487.1| diaminopimelate decarboxylase [Clostridium novyi NT] Length = 470 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 77/414 (18%), Positives = 147/414 (35%), Gaps = 53/414 (12%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+Y+ ++++L N+D KN A K+ A K + + + + + ++S+YE Sbjct: 53 TPFYVYSQKEILRNIDEIKNAFKNHANTKIFYASKACSVMKILNIVKESGICVEANSIYE 112 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 V + F G+ +N K+ A+ ++ +I ++ +L+ ++ +L K Sbjct: 113 VRKCLDVGFTGDQIVFNGVVKKKEELEFAIKNDLYSINVDSFFELDIIEEITNRLQKNAN 172 Query: 120 LRINPSVSYSKFILADPNRPFS-RLGEKCKDK-------IESEIKNVNGLMFHNNCENKS 171 + + S S F + G +D I + + GL H + Sbjct: 173 VCVRIEPSVSSPTHPGLVTAFHAKSGIDLEDAENMCKKIINMKYVRLKGLHMHVGDQVPI 232 Query: 172 FLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY-------------PVKDF 214 F + + KE + + I++GGGI K DF Sbjct: 233 SEPFRKATEIMVKEAARLERVLNYKFDLINVGGGIPVPYKYERGNAQEDYLYGGINSYDF 292 Query: 215 CQRLKEFSEKYS--VQIYLEPGEAIVTNTTT---------------LNTTVLDISENIKN 257 + K+ ++I +EPG IV++ N + D+ + Sbjct: 293 ASAIISEVHKWRKDIEICIEPGRKIVSSAAVLLTSISCEKTKTNYDENNNIQDVVDWKFI 352 Query: 258 LVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH------FEKP 311 ++ D+ Y +A+ V G C GD F + Sbjct: 353 DAGYSILSDSLHFDWYFYLLNASKTNEKYESLFKVAGPLCDGGDYFHQGVVGEFFALPNN 412 Query: 312 VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 ++GD ++F D Y I + +N + + N +G + IR SY D Sbjct: 413 TEVGDVLAFLDAGAYTIESQTVYNNRPRTAVVLINNEGKDELIRREDSYEDMLK 466 >gi|289548121|ref|YP_003473109.1| Orn/DAP/Arg decarboxylase 2 [Thermocrinis albus DSM 14484] gi|289181738|gb|ADC88982.1| Orn/DAP/Arg decarboxylase 2 [Thermocrinis albus DSM 14484] Length = 390 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 113/355 (31%), Gaps = 18/355 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP +D + + + Y VK+ A+K + L + G +S E+ Sbjct: 39 TPVLYMDLEGIKSRYIELRYHL--PQVKVYYAVKANDHPEIIRVLAELGSGFEVASSEEL 96 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E + + K + D ++ ++++K A++ + L Sbjct: 97 RRVLEMGVSPDRVISSNPVKPMDFIEYAYSKGVDRFAVDSFTEVDKLAKVAKRSRVYVRL 156 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SA 177 + S + + G+ FH + ++ + Sbjct: 157 VVPNEGSDWPLSKKF--GVDVNTALDILEYAREKGLIPYGVTFHVGSQCNNYRNWFIGIR 214 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQIYL 231 + + +++ ++LGGGI L++F ++ + Sbjct: 215 TAAELWSKAKERGLRLQMLNLGGGIPVRYTYEALSVEDIAYYVRGLLQKFFPSMPHELQI 274 Query: 232 EPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YT 289 EPG IV + + T V+ + +N + +D+ V + + L A G Sbjct: 275 EPGRGIVGDQGIMVTRVIGKARRGNENWIYIDTGVFNGLAEALGGIRYAFYLDREGELEE 334 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + G SC + D+ ++GD + Y FNG +P + Sbjct: 335 WTIGGVSCDSMDVVARSVPLPEPEVGDYLYILSAGAYTTVYAANFNGFPVPQVVF 389 >gi|67923188|ref|ZP_00516676.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Crocosphaera watsonii WH 8501] gi|67854974|gb|EAM50245.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Crocosphaera watsonii WH 8501] Length = 404 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 59/377 (15%), Positives = 124/377 (32%), Gaps = 15/377 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ L + + A + N G +++ + Sbjct: 25 GSPLYVYQSDLLRHGISHITTSIPYNNTLFQFATVTNGNIELLKLFNDQGWGIHANTPGD 84 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ-KLHKKI 118 + LG F GE Y+ + + + T+ +++SQL + + Sbjct: 85 IYLGLKAGFSGEKIVYSGSNLNPEEMTQILKWGVRTLNLDSISQLELLYEIYKSFPGDLS 144 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 L++ ++ I + + + N+ GL F+ + F+ + Sbjct: 145 SLKLGLRLNEPNLIKDSRIGVQPQEFPEAIKIAKRVGLNIQGLHFYRGTGTNATRAFTKV 204 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEK--YSVQIYLE 232 + +I + G + E++ GGG + + F Q L + + +Q+ +E Sbjct: 205 IDDI-IQIGQLLPNWEYLDFGGGFGYPYHHDKIAFNWHKFGQELTDKLNQLSKPIQLIIE 263 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPYTAM 291 PG A++ N TL V+ + +I + ++ + I T Sbjct: 264 PGRAVIANCATLLAKVVSVKWQGDKQIIGVDTTVGNLSVPSVHGGYRKIISWPEKSQTLW 323 Query: 292 ---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 VCG + + D G+ ++IGD I +V Y + F P + + Sbjct: 324 LTDVCGNTTYSRDYLGKNCQLPALEIGDIIGILEVGAYGYAMSSHFLHRPRPAEVLLEKE 383 Query: 349 GTIKAIREFSYNDYYNN 365 + Y +N Sbjct: 384 SHRLIRQREDYQVLIDN 400 >gi|256821372|ref|YP_003145335.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Kangiella koreensis DSM 16069] gi|256794911|gb|ACV25567.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Kangiella koreensis DSM 16069] Length = 408 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 50/376 (13%), Positives = 114/376 (30%), Gaps = 35/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ D+ + N+D V L A+K + + L+ +DG +S E Sbjct: 35 QTPCYVYDRSVIKQNVDRLRRFF--PKVSLHYAIKANPMPAVVNYLSHQVDGLDVASAKE 92 Query: 63 VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + ++ + E+ + + TI ++++L + A + + Sbjct: 93 LHTALSTGISPSKVSFAGPGKSEQELTMAIFSGITINIESITELKRIITIADSHDRVANI 152 Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS-- 171 + + K + G + +E N GL +N + Sbjct: 153 ALRLNPDFELKSSGMKMGGGPQQFGIDVEQLDQVFELLEHPKLNFMGLHIFTGSQNLNAG 212 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225 +++ + + + ++ +++GGG K ++ + L + +++ Sbjct: 213 SIITAHNSIFALVARLHAEYGFSLKHLNIGGGFGIPYFPGDKLLDLEPIAENLNKLIDEH 272 Query: 226 S-----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 ++ LE G +V N + D + ++ + H Sbjct: 273 QSLLNDCELILELGRYLVGNAGIYLCQITDKKVSRGQTYLIANGGLHHHLAASGNFGQVI 332 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 A + + G C DI +IGD ++ Y Sbjct: 333 RKNYPVAIANRMQQSDTELVNIVGPLCTPLDILANKMELPKAQIGDWVAVYQSGAYGFTA 392 Query: 331 KNW-FNGINMPTIAVK 345 F P + Sbjct: 393 SPRDFLSHPHPVELLL 408 >gi|326202520|ref|ZP_08192388.1| Orn/DAP/Arg decarboxylase 2 [Clostridium papyrosolvens DSM 2782] gi|325987104|gb|EGD47932.1| Orn/DAP/Arg decarboxylase 2 [Clostridium papyrosolvens DSM 2782] Length = 417 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 51/395 (12%), Positives = 113/395 (28%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D +K+++ + ++K G+ + ++S E Sbjct: 14 GTPVYVYDTEKIISQYTLLKNSLPQE-FGIFYSMKANPLVGICQLFKKLGSCIETASSGE 72 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + F + + K + D I ++ + A K+ + + Sbjct: 73 LHAALSAGFSPDKIIFTSPGKTYDELEYAVETDIYSINIESLDEAEAINKIAAKIGRVVD 132 Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKS 171 + I + + + S+ G K+ V G+ + + + Sbjct: 133 ISIRINPDFDIAGSGIKMSGVASQFGIDQIHMESVFKELKTLTNLKVIGIHIYTGTQALN 192 Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 ++ I + + + +++LGGG L+ + Sbjct: 193 AHSIVQSMEQIIQLALETSEKYCFNLRFLNLGGGFGVPYFKDDSTLDMDILRNEFGQVWD 252 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQE 277 Q+++E G ++ + T T VL + ++ D H L + Sbjct: 253 KYKDRLSDTQVFVESGRFLMAESGTYLTKVLYRKECKGRKYLVCDGGSNQHASSAFLGRH 312 Query: 278 S------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + + V G C D+ G+ GD ++ E Y I + Sbjct: 313 IRNNFPMHILNKSGYEEPVNVVGPLCTPTDVIGQNVTLPEAVAGDVVAIEKSGAYGITQS 372 Query: 332 NW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 F +P T + D+ Sbjct: 373 PGLFLSHPLPAEVQYYKGKTYILRERWEKEDFMLR 407 >gi|30248913|ref|NP_840983.1| Orn/DAP/Arg decarboxylase family protein [Nitrosomonas europaea ATCC 19718] gi|30138530|emb|CAD84820.1| Orn/DAP/Arg decarboxylases family 2 [Nitrosomonas europaea ATCC 19718] Length = 391 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 118/354 (33%), Gaps = 17/354 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ LID + N V+ A K + TL + G +S+ E+ Sbjct: 42 PFLLIDSNIIRNKARRFKTSMPR--VRPHYAAKANPDPRVLKTLIEEGVGFEIASIAELD 99 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L Y+ K + + +++ +L K K K+ LR Sbjct: 100 LLMSLGVPAAEIFYSNPMKSRAYIEYAAAKGVEWYVLDSIEELRKIVSI--KPDAKLYLR 157 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I+ S + LA + D+ ++ G+ FH + ++ + ++ Sbjct: 158 IDTPNIGSDWPLAGKFGTHLVDVSEIIDEAVRLKADLAGVTFHVGSQCRNPQNWRVGIER 217 Query: 182 IEKEFGHF---ITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIYL--EPG 234 + F + ++LGGG ++ + + E I++ EPG Sbjct: 218 AQTVFASMREAGLKPRLLNLGGGYPVRHVKPIPSIEVIAEVINEAIADLPEDIHVMAEPG 277 Query: 235 EAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMV 292 +V+++ V+ + K + D+ + + + + G V Sbjct: 278 RYLVSDSACFVCRVVGTATRNGKRWMYWDAGIFGGIIEVSEGLRYEILTQRNGSLIPWSV 337 Query: 293 CGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 G +C + D+ ++ D I + Y + + FNG +P + V Sbjct: 338 AGPTCDSVDVLMHDEMLPEDIQENDFIFIPNAGAYTTSYASNFNGFPLPDVVVI 391 >gi|256823045|ref|YP_003147008.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Kangiella koreensis DSM 16069] gi|256796584|gb|ACV27240.1| aspartate kinase [Kangiella koreensis DSM 16069] Length = 853 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 116/360 (32%), Gaps = 25/360 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ + + N+ I ++ A+K + T + G + S++EV Sbjct: 498 AYIYNLAAVAENIKNLQSISAVD--QIFFAVKANNHPQVLTTAYEQGIGFETVSIFEVER 555 Query: 66 GHEKFGG---ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E F + + L + ++ L +K I LR Sbjct: 556 IKELFPAIDTNRIFFTPNFASHNEYQKALDYGVMLSLDSSYPLK--YWAKTFANKTIFLR 613 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLCF 175 I+P+V S+ G ++ I+ V GL H + + Sbjct: 614 IDPNVGKGHHENVRTAGATSKFGIPIQELEELLPIIKEHNIKVLGLHAHAGSGILTNEHW 673 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-----YSVQIY 230 + + + +++++LGGG ++ + +++ + + Q++ Sbjct: 674 AEHARLLA-SVAKQFPDVKYLNLGGGFGIKERAQQTELTMEQINQSLLEVKAQYPDHQLW 732 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI----YPNT 285 +EPG IV NT L + V + + + +++ + + + L + + Sbjct: 733 IEPGRYIVANTGVLVSKVTQVKQKQNYYYVGINTGMNSLMRPALYGSYHNIVNLSRMTES 792 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + A V G C + D G GD I E+ Y +N Sbjct: 793 KNHLATVVGPICESTDKLGIEIPFPDTFEGDLILIENAGAYGHVMSTHYNMRAPAEEVCL 852 >gi|312143556|ref|YP_003995002.1| Orn/DAP/Arg decarboxylase 2 [Halanaerobium sp. 'sapolanicus'] gi|311904207|gb|ADQ14648.1| Orn/DAP/Arg decarboxylase 2 [Halanaerobium sp. 'sapolanicus'] Length = 410 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 55/388 (14%), Positives = 116/388 (29%), Gaps = 32/388 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+++ D++ ++ L+ + K A+K + + + G ++++ E Sbjct: 19 GTPFHIYDERIIIERLNNLIDSFNWTDFKEYFAIKANPNPHILKIMKEMNCGVDAATVSE 78 Query: 63 VMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + L F G + + I + + + + + Sbjct: 79 IKLAEKVGFSGTDIMFTSNLTTLDAYQYAVDRGAIINIDWAAD---IYELFENDIIPENI 135 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVN--GLMFHNNCENKSF-- 172 + + + + S+ G + E+ + GL Sbjct: 136 SFRLNPGSIENEI-MGDSKDSKFGSTAEQIKEAVSFLSKNGIKKLGLHTMVVSNENDPAI 194 Query: 173 --LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--- 227 + + F +IE+I++GGGI D + Y Sbjct: 195 FKDYTEMIFDFALELINEFGVEIEFINIGGGIGIPYLPEQNVDLKAIADSVYQSYKNIIL 254 Query: 228 ------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 +I+LE G + + L T ++ E K + +D+S+ + + Sbjct: 255 AEDLKPKIFLESGRYVTGESGYLVTKIIKEKETFKKYLGLDASMSDLMRPGMYGSYHHIT 314 Query: 282 ------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 V G C D F K D I D + +N Sbjct: 315 NIDAEERGEKETEIYDVVGSLCENNDKFAVNRKLPLSKKNDIIVIHDTGAHGHAMGFNYN 374 Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDY 362 G+ + + DG ++ IR ++ DY Sbjct: 375 GMLKNSEFLYTRDGKVRQIRRNETFEDY 402 >gi|242010362|ref|XP_002425937.1| Ornithine decarboxylase, putative [Pediculus humanus corporis] gi|212509920|gb|EEB13199.1| Ornithine decarboxylase, putative [Pediculus humanus corporis] Length = 456 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 116/363 (31%), Gaps = 20/363 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D +++ + ++ A+KC + + L +S E+ Sbjct: 35 PFFVCDVGEIVKKFNEWKVKFPR--IQPFYAVKCNDTPIVLEVLGALGSSFDCASKNELS 92 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + K + + ++ +K K+ ++ LRI Sbjct: 93 KVLDLGVDPKKIIFANPCKPISHIRFAESNKVDLITFDNETELYKMKSLFPESRLILRIR 152 Query: 124 PSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + L + K + S NV GL FH + + Sbjct: 153 YDAKVAACQLGMKFGCDHQKEAPKLINVARSLGLNVVGLSFHVGSGCGDPPVYRKAIAAC 212 Query: 183 EKEFGHF---ITQIEWISLGGGIH---FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + F + + +GGG T D + Q L++F ++I EPG Sbjct: 213 KTLFDYAKTLGYDFNILDIGGGFPGNKHTSVDEFAEIINQALEDFFPDPEMKIIAEPGRF 272 Query: 237 IVTNTTTLNTTV---------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 + + TL T V I V S + + D+ N Sbjct: 273 MAASCFTLVTNVHSKRTVLGENGIHNMYYINDGVYGSFNSIIYDHAHVNPIPLRQSNLKN 332 Query: 288 YTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 T + G +C D + + IGD I FED+ Y + + FNG +P + V Sbjct: 333 VTYASIWGPTCDGLDQVCDNVLLPELTIGDWIVFEDMGAYTLPGASTFNGFPVPKVYVVA 392 Query: 347 VDG 349 + Sbjct: 393 SEN 395 >gi|319786420|ref|YP_004145895.1| aspartate kinase [Pseudoxanthomonas suwonensis 11-1] gi|317464932|gb|ADV26664.1| aspartate kinase [Pseudoxanthomonas suwonensis 11-1] Length = 874 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 108/366 (29%), Gaps = 26/366 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + + L + G SL E Sbjct: 511 GTPRYVYHLPTVRERARQLKELAAVD--RRYYAIKANPHPAILNALAEEGFGLECVSLAE 568 Query: 63 VMLGHE---KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + ++ E + L+ T+ + V L + + + + Sbjct: 569 IRHVFAVVPGIDPARVLFTPSFAPREEYEQALALGVTVTVDNVELLRNWPE--TFRGRSL 626 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSF 172 LRI+ + ++ G + E + + GL H ++ Sbjct: 627 WLRIDLGHGDGHHEKVNTGGKEAKFGLSAQRVDEFVQEARGLGVVITGLHAHLGSGVENM 686 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQRLKEFSEKYSV 227 + M + F + + +GGG+ + + + Sbjct: 687 GHWRQMCDELAGFARRFG-TVATLDIGGGLPIPYAPEDEPFDLEAWAASLAEVRAVHPAF 745 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 + +EPG +V L + ++ V +D+ + A V + + Sbjct: 746 GLVIEPGRFLVAEAGVLLARATQVVEKDGVVRVGLDAGMNALVRPAMYDAWHDIVNLQRI 805 Query: 287 PYT----AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C + D+FG+ GD + D Y + + +N +P Sbjct: 806 DAPADGQFDVVGPICESSDLFGKRRRLPRDTAAGDVMLVADAGAYGHSMASRYNLRELPP 865 Query: 342 IAVKNV 347 V + Sbjct: 866 EDVIDG 871 >gi|86475640|emb|CAG77429.1| putative glutamate decarboxylase [Bacillus circulans] Length = 436 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 120/400 (30%), Gaps = 39/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+YL D + + R N ++ L+LK + Q+ G +S E Sbjct: 24 ETPFYLYDGDFIEAHYRQLRS-RTNPAIQFYLSLKANNNIHLAKLFRQWGLGVEVASAGE 82 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L F E ++ + AV S II +V +L ++ A+K +K Sbjct: 83 LALARHAGFSAENIIFSGPGKKRSELEIAVQSGIYCIIAESVEELFYIEELAEKENKTAR 142 Query: 120 --LRINPSVSYSKFILAD-----PNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKS 171 +RINP S+ + + + D + S G+ + +N + Sbjct: 143 VAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSLQFTKFIGIHVYTGTQNLN 202 Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + E I+LGGG + ++ Y Sbjct: 203 TDSIIESMKYTVDLGRNIYERYGIVCECINLGGGFGVPYFSHEKALDIGKITRTVSDYVQ 262 Query: 226 --------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------- 268 +E G ++ T VL + + ++ H Sbjct: 263 EARDTRFPQTTFIIESGRYLLAQAAVYVTEVLYRKASKGEVFVIVDGGMHHHAASTFRGR 322 Query: 269 -VPDYLLYQESATIYPNTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + + + + G C D G+ + GD + + Sbjct: 323 SMRSNYPMEYIPVREDSGRRELEKVTIAGPLCTPEDCLGKDVHVPALYPGDLVCVLNSGA 382 Query: 326 YNINRKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y ++ F G P +K R+ + +D Sbjct: 383 YGLSFSPVHFLGHPTPIEILKRNGSYELIRRKGTADDIVA 422 >gi|284992534|ref|YP_003411088.1| diaminopimelate decarboxylase [Geodermatophilus obscurus DSM 43160] gi|284065779|gb|ADB76717.1| diaminopimelate decarboxylase [Geodermatophilus obscurus DSM 43160] Length = 496 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 57/411 (13%), Positives = 115/411 (27%), Gaps = 51/411 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ + A + + A K F + + + S E Sbjct: 60 GTPLFVLDEGDFRS--RAADFAAAFTDADVHYASKAFLCGQIARWIADDGLHLDACSGNE 117 Query: 63 VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL----- 114 + L F A + K AV + ++ ++ ++++ A Sbjct: 118 LALALAAGFPAGRIALHGNNKSLVELQLAVDAGIGHVVLDSFDEVDRLVPLAAARVAAGG 177 Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFH 164 + +R + + G I + GL H Sbjct: 178 APVPVLIRTTVGIEAHTHEFIATAHEDQKFGFSLATGDALTAAVRVIREPALRLTGLHSH 237 Query: 165 NNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF------ 214 + F A + G + ++LGGG Sbjct: 238 IGSQIFDTAGFEAAAHRVVGLLGQVRQATGEVLGELNLGGGFGIAYLPGDDPVSPGDVAR 297 Query: 215 -----CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-----------NIKNL 258 + ++ +EPG AI T + I ++N Sbjct: 298 RLRSAVAAECDALGLPVPRLAVEPGRAIAGPGTVTLYEIGTIKPVRLGSGGQGAPQVRNY 357 Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVK 313 V VD + ++ L + N P V G+ C +GDI + V+ Sbjct: 358 VSVDGGMSDNIRTALYDASYTCVLANRESDAPPALCRVVGKHCESGDILVRDLWLPADVQ 417 Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 GD ++ Y + + +N + P + + +R + +D + Sbjct: 418 PGDLLAVAATGAYCWSMASNYNYLLKPPVVAVRDGAATEIVRRQTLSDVFA 468 >gi|116668430|pdb|2J66|A Chain A, Structural Characterisation Of Btrk Decarboxylase From Butirosin Biosynthesis gi|70720851|dbj|BAE07075.1| BtrK [Bacillus circulans] Length = 428 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 120/400 (30%), Gaps = 39/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+YL D + + R N ++ L+LK + Q+ G +S E Sbjct: 16 ETPFYLYDGDFIEAHYRQLRS-RTNPAIQFYLSLKANNNIHLAKLFRQWGLGVEVASAGE 74 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L F E ++ + AV S II +V +L ++ A+K +K Sbjct: 75 LALARHAGFSAENIIFSGPGKKRSELEIAVQSGIYCIIAESVEELFYIEELAEKENKTAR 134 Query: 120 --LRINPSVSYSKFILAD-----PNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKS 171 +RINP S+ + + + D + S G+ + +N + Sbjct: 135 VAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSLQFTKFIGIHVYTGTQNLN 194 Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + + + E I+LGGG + ++ Y Sbjct: 195 TDSIIESMKYTVDLGRNIYERYGIVCECINLGGGFGVPYFSHEKALDIGKITRTVSDYVQ 254 Query: 226 --------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------- 268 +E G ++ T VL + + ++ H Sbjct: 255 EARDTRFPQTTFIIESGRYLLAQAAVYVTEVLYRKASKGEVFVIVDGGMHHHAASTFRGR 314 Query: 269 -VPDYLLYQESATIYPNTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + + + + G C D G+ + GD + + Sbjct: 315 SMRSNYPMEYIPVREDSGRRELEKVTIAGPLCTPEDCLGKDVHVPALYPGDLVCVLNSGA 374 Query: 326 YNINRKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y ++ F G P +K R+ + +D Sbjct: 375 YGLSFSPVHFLGHPTPIEILKRNGSYELIRRKGTADDIVA 414 >gi|325293061|ref|YP_004278925.1| Diaminopimelate decarboxylase [Agrobacterium sp. H13-3] gi|325060914|gb|ADY64605.1| Diaminopimelate decarboxylase [Agrobacterium sp. H13-3] Length = 440 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 45/387 (11%), Positives = 97/387 (25%), Gaps = 35/387 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +L D + + ++K + Q G +S+ E Sbjct: 56 GTPCFLYDASAMRRAYRDLATALSGF-ADIYYSVKANPLPAIVSLFRQEGAGAEIASVGE 114 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + K + + S I + ++ + + + + I Sbjct: 115 YRAAIKAGIPPENIIFAGPGKRQAELLEVIESGTGEIHIESAEEITRIEAIGRPVKASIR 174 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENKSFLCF 175 + P + F E+ ++ + N+ G+ + + Sbjct: 175 INPVPDAQAGAMRMGGKATAFGFDEEELENVLPLFRDIRHINLVGVHIYGGTQILDADML 234 Query: 176 SAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKE 220 + ++ + +E I LGGG+ + D ++ Sbjct: 235 VSQWRHSILLAARMAEMLGRPLETIDLGGGLGIPYFAGETPLDLAAVSAAIPDLKALVQA 294 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 I +EPG + V + + +V H Sbjct: 295 HPLIADAHIIVEPGRFLAGPGGIYVAEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIV 354 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + + TA + G C D +K GD ++ Y Sbjct: 355 KRNYPIVAPAMMQADYEETATIVGPLCTPLDTLARNAALPKLKAGDLLAILQSGAYGATA 414 Query: 331 K-NWFNGINMPTIAVKNVDGTIKAIRE 356 + F + +G + I Sbjct: 415 SPSGFLSHPAAKEVLV-ENGAFEVIGR 440 >gi|311743945|ref|ZP_07717751.1| diaminopimelate decarboxylase [Aeromicrobium marinum DSM 15272] gi|311313075|gb|EFQ82986.1| diaminopimelate decarboxylase [Aeromicrobium marinum DSM 15272] Length = 469 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 56/407 (13%), Positives = 116/407 (28%), Gaps = 47/407 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ A + A K F + + + + E Sbjct: 61 GTPLYVLDEDDFRRRARAFREAFDTAD--VYYAGKAFLSVATARWVAEEGLNLDVCTGGE 118 Query: 63 VMLGHEK-FGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + F + K A+ II ++V ++++ ++L Sbjct: 119 LAVAMAADFPPARIGLHGNNKSVAELRRALELGVGRIIVDSVEEIDRLVGLTEELGVTAR 178 Query: 120 LRINP--SVSYSKFILADPNRPFSRLGEKC--------------KDKIESEIKNVNGLMF 163 + + V + G + + + + GL Sbjct: 179 VMVRVTAGVEAHTHEYISTAHEDQKFGFSIHGREGRPSDALQAVRRIVAAPGLKLLGLHS 238 Query: 164 HNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDF 214 H + F +L+ + + LGGG +P Sbjct: 239 HIGSQIFVTDGFEVAARRVLRLQAEIERELGVTLPEFDLGGGFGIAYTTQDDPRHPQDLA 298 Query: 215 CQRLKEFSEKYSVQIY------LEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVD 262 + +K ++ +EPG AIV +T V E + V VD Sbjct: 299 REMVKIVHDECGALDIGVPKLSIEPGRAIVGPSTFTLYEVGTTKEVALDGGASRRYVAVD 358 Query: 263 SSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDR 317 + ++ L + A+ + V G+ C +GDI + + V GD Sbjct: 359 GGMSDNIRTALYSADYSATLASRSSEAPAVLSRVVGKHCESGDIVVKDEYLPADVAAGDL 418 Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 ++ Y + + +N + + +R + +D Sbjct: 419 VAVPGTGAYCRSLASNYNHVPRAAVVAVREGEARLILRRETEDDLLR 465 >gi|220929910|ref|YP_002506819.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulolyticum H10] gi|220000238|gb|ACL76839.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulolyticum H10] Length = 416 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 46/395 (11%), Positives = 114/395 (28%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y D +K+++ + + ++K G+ + G ++S E Sbjct: 14 GTPVYAYDTEKIMSQYALLKNSLPQE-IGIFYSMKANPLLGICQLFKKLGSGIETASSGE 72 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + F E + K + I ++ + + A K + + Sbjct: 73 LHTALCAGFPPEKIIFTSPGKTYDELKYAVETGIYSINIESLEEAEVINEIADKKGRVVD 132 Query: 120 LRINPSVSY--------SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171 + I + + + + RL + + N+ G+ + + + Sbjct: 133 ISIRINPDFDIAGSGIKMSGVASQFGIDQIRLDSVLNELKALQNLNIMGIHIYTGTQALN 192 Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224 ++K ++ ++++++LGGG L+ + Sbjct: 193 AHSIVQSMEQIVKLALDTSEKYVFKLKFLNLGGGFGVPYFKDDSTLDMDILRNEFSEMWN 252 Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-------IVDSSVEAHVPD 271 ++ Q+++E G ++ + T T +L E ++ Sbjct: 253 KYKDRLFNTQVFVESGRFLMAESGTYLTKILYRKECKGRKYLVCDGGSNQHAASAFLGRH 312 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + ++ V G C D+ G+ GD ++ Y + + Sbjct: 313 IRNNFPIQILNKSSNEEQVNVVGPLCTPTDVIGQNVMLPEAVPGDIVAVLKSGAYGVTQS 372 Query: 332 NW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 F +P T + D+ Sbjct: 373 PGLFLSHPLPAEVQYYEGKTYILRERWGKEDFMLR 407 >gi|289582392|ref|YP_003480858.1| diaminopimelate decarboxylase [Natrialba magadii ATCC 43099] gi|289531945|gb|ADD06296.1| diaminopimelate decarboxylase [Natrialba magadii ATCC 43099] Length = 411 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 47/379 (12%), Positives = 105/379 (27%), Gaps = 22/379 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D ++ N +++ A K + + + + ++ E Sbjct: 29 DTPLYVTDLDRVKENYTRFASAF--PDAEVMYAAKAHTGKAVLEAVLEAGGEIECAAWGE 86 Query: 63 VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN---TVSQLNKFKDKAQKLHKKI 118 + T Y ++ T+ + A++ + Sbjct: 87 LQRSIDAGADPNTLQYTAVNPPDHDLDYATDLAAENPGLTITIGATDTLDRLAERGYDGR 146 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENKSFL 173 + ++ G E ++ GL H + Sbjct: 147 IAIRINPGIGTGHHEKVATGADAKFGIPYDRVPEVADRVREEFDLVGLHAHAGSGVLTEG 206 Query: 174 CFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFSEKYS 226 E +E++ +GGG ++ +++ Sbjct: 207 LEEHCRAIERVGEMARRVGDEDLEFVDVGGGYGVPYREDDEPLDLEKTSNMVRDAVGDLE 266 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---Y 282 + LEPG +V + + + + V I E V+ +D+S+ + + Sbjct: 267 ATLKLEPGRYVVADASVILSEVNTIKEAPDTTVVGIDASLATLIRPAMFGSYHPMYNVSA 326 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 P+ P+ V G C + D+F + D I+ + Y + F+ P Sbjct: 327 PDREPHEVTVGGPVCTSADVFAHDRPVARPEREDIIAIGNAGSYGYELASQFHSQPRPAE 386 Query: 343 AVKNVDGTIKAIREFSYND 361 R + +D Sbjct: 387 VALENGEARVVRRRETLDD 405 >gi|145355995|ref|XP_001422228.1| Diaminopimelate decarboxylase [Ostreococcus lucimarinus CCE9901] gi|144582468|gb|ABP00545.1| Diaminopimelate decarboxylase [Ostreococcus lucimarinus CCE9901] Length = 471 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 58/402 (14%), Positives = 116/402 (28%), Gaps = 43/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D+ L A G+ + A+K + T + +SS YE Sbjct: 68 GTPTYVYDRATLDAQAARARAFPNAYGLTVRYAMKASPNAAILKTFKKAGLHVDASSGYE 127 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 F G + + + ++ + ++ QL +F ++G+R Sbjct: 128 CERAMKAGFEGGEISLSTQELPRFFEDLVRRGVKVNACSLDQLERFGRA--FPGGEVGVR 185 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSFLCF 175 NP + + P S G + + +E V + H + + Sbjct: 186 FNPGLGSGGTGKTNVGGPSSSFGIWFESLPRVKEIVEQYDLKVVRVHTHIGSGSDPAVWQ 245 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230 + + ++ ++LGGG Y + ++ Sbjct: 246 KVSG--MSLDLCREFPSVDTLNLGGGYKVGRMSYEKSTDLAVVGVPVKEAFEAFAKETGR 303 Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKNLVIVD----SSVEAHVPDYLLYQESATI 281 +EPG ++ N+ + T+V D + + L + + Sbjct: 304 KLKLEIEPGTFLLANSCAVVTSVQDKVVTGTAEGHTFLKLDMGMTEVLRPSLYGSQHPLV 363 Query: 282 YPNTGPY------TAMVCGRSCLAGDIF---------GEFHFEKPVKIGDRISFEDVAGY 326 + +V G C +GD+ V IGD + E Y Sbjct: 364 SVSKAGELPAAQADYVVVGHCCESGDLLTPAPDEPETISERRMGEVNIGDYVVIEGSGAY 423 Query: 327 NINRKN-WFNGINMPTIAVKNVDGT--IKAIREFSYNDYYNN 365 + +N ++ DG R+ + N Sbjct: 424 CAGMSSKNYNSFPEAPEVMRLADGAGFAVIRRKQTLEQILAN 465 >gi|33519728|ref|NP_878560.1| diaminopimelate decarboxylase [Candidatus Blochmannia floridanus] gi|33504073|emb|CAD83334.1| diaminopimelate decarboxylase [Candidatus Blochmannia floridanus] Length = 425 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 120/398 (30%), Gaps = 45/398 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D ++N ++ + A K + + +N + SL E+ Sbjct: 28 PVWAYDASIIINRINQLKQFDV-----IRFAQKSCSNIHILKLMNNNGVKIDAVSLGEIE 82 Query: 65 LGH-EKFGGET----HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 F + + + + + I N S + + KI Sbjct: 83 RALLAGFKSDNEDSEIVFTADIFENDTLLKIVELG-IPVNIGSIDMLIQLGSCSPRHKIW 141 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFL 173 LRINP Y + S+ G +D + + G H Sbjct: 142 LRINPGFGYGHNYKTNTGGENSKHGIWHEDIPTALFYIRYYNLRLIGFHMHVGSGVHYDH 201 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------- 224 +++ F + ++ IS GGG+ + + K Sbjct: 202 LLKVSYAMVQQVFKYT-EDLQAISAGGGLTVPYESHEKPVDVNNYFNIWNKARQEISQCL 260 Query: 225 -YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA--- 279 + +Q+ +EPG +V + L T + + +N V++D+ + + Sbjct: 261 GHKIQLEIEPGRFLVAESGILITQICAVKRMGRRNFVLIDAGYNDLMRPVMYGSYHHISL 320 Query: 280 -----TIYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKP-VKIGDRISFEDVAGY 326 ++ G C +GDIF + +KIGD + F D Y Sbjct: 321 IPGDNRNIMFDKLNDIIIGGPLCESGDIFTQNSYGEVLPRKLPDSLKIGDYLIFHDTGAY 380 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R+ D ++ Sbjct: 381 GASMSSNYNTRPLLPEVLWENGEIRQIRRKQRLEDLFS 418 >gi|270157152|ref|ZP_06185809.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella longbeachae D-4968] gi|289164443|ref|YP_003454581.1| diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC) [Legionella longbeachae NSW150] gi|269989177|gb|EEZ95431.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella longbeachae D-4968] gi|288857616|emb|CBJ11456.1| putative diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC) [Legionella longbeachae NSW150] Length = 853 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 56/363 (15%), Positives = 111/363 (30%), Gaps = 25/363 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P Y+ L K+ L A+K + T+ + G S+ E+ Sbjct: 496 SPCYVYHNPTQAAKAKQLL-ALKSIDA-LFYAIKANPHPAILKTMEKEGIGFECVSIQEL 553 Query: 64 MLGHEKFG---GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119 E F + + N I +++ L ++ + ++++ Sbjct: 554 DRVVELFPDIDKNRILFTPNFAPKTEYEYALNIGCYITIDSLYPLERWPEL--FKNREVI 611 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSFL 173 +RI+P S+ G D + V GL H+ + Sbjct: 612 IRIDPGTGAGHHKHVSTGGNESKFGITQNDIEQVVALTKKNNIQVVGLHAHSGSGILTPE 671 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYSV-Q 228 + ++ Q + I+LGGG+ +K + L +Y + Sbjct: 672 LW-QQTASMLASLTEQFPQAKSINLGGGLGVVEKPGQQPLDFVNLDALLMAVKSRYPQIK 730 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI----YP 283 I+LEPG V + + V E K I +++ + + + L + Sbjct: 731 IWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGSYHEIVNLSRLY 790 Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + + G C +GD G + GD + + Y + +N Sbjct: 791 EEKAGFSHIVGPICESGDTLGYDRLLPVTEEGDVLLIANTGAYGRCMSSHYNLRPPAQEI 850 Query: 344 VKN 346 V Sbjct: 851 VLE 853 >gi|24213747|ref|NP_711228.1| diaminopimelate decarboxylase [Leptospira interrogans serovar Lai str. 56601] gi|45658455|ref|YP_002541.1| diaminopimelate decarboxylase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24194569|gb|AAN48246.1| diaminopimelate decarboxylase [Leptospira interrogans serovar Lai str. 56601] gi|45601698|gb|AAS71178.1| diaminopimelate decarboxylase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 422 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 58/396 (14%), Positives = 133/396 (33%), Gaps = 35/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ ++++ + + AL G+ + A+K + + + + +SS YE Sbjct: 23 GTPVFVYSRERIEKSCEVALAFPNAYGLTVRYAMKANPNRTVLEIMKRKGIQIDASSEYE 82 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V+ H F E + ++ ++ QL F + K++ +R Sbjct: 83 VLRAIHYGFKPEQIMLTSQELAKGLKELVEKGVVFNACSLRQLETFGNL--FPGKEVSVR 140 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFLCFSA 177 NP + + D S G +D + ++ H + + S Sbjct: 141 FNPGLGSGQTKKTDVGGKTSSFGIWYEDINQVKEIASKFDLKIFKVHTHIGSGSDPEVWK 200 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY------- 230 ++ + + ++ + ++LGGG + Q++ + + Sbjct: 201 VVAQVSLDIAAQFSECKILNLGGGFKVGRMEDEKTTDFQKIGPPVVELFQEFAKKHGTEL 260 Query: 231 ---LEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVPDYLLYQESATIYPN 284 +EPG ++ N ++ TTV D+ D+ ++ + L + + + Sbjct: 261 RLEIEPGSFLMVNNGSILTTVDDVVSTGPGGYTFVKLDAGMDVNTRPSLYAAKHPLVVVS 320 Query: 285 T------GPYTAMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFEDVAGYNINRK 331 + G C +GD+F + K+GD + E Y + Sbjct: 321 KEGVHSGKTADYVYVGHCCESGDLFTQAEGGGPITRITGEAKLGDYVVMEGAGAYCSSMS 380 Query: 332 N-WFNGINMPTIAVKNVDGTI-KAIREFSYNDYYNN 365 +N + + DG+ R ++ + N Sbjct: 381 TKNYNSFPETAEVLVDSDGSFQLIRRRQNWEQIFQN 416 >gi|284050162|ref|ZP_06380372.1| Orn/DAP/Arg decarboxylase 2 [Arthrospira platensis str. Paraca] gi|291572167|dbj|BAI94439.1| diaminopimelate decarboxylase [Arthrospira platensis NIES-39] Length = 409 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 123/370 (33%), Gaps = 13/370 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ D + L ++ + A + + Q G +++ + Sbjct: 32 GSPLYVYDAEILQETINHIGGAVNYPKTRFKFASVTNGSIALLKIFQQANWGLHANTPGD 91 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 LG F + Y+ + + +L N +++ QL F + Q+L Sbjct: 92 AFLGLKAGFHPQQIVYSGSNLNHREFQLLLNWGITTYNLDSLDQLQLFGEVFQQLKPDFL 151 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 ++ ++ K + + S ++GL F+ + F+ ++ Sbjct: 152 PKLGFRLNLPKINGDSRIGVNPQEFPEAIKIASSAGLKISGLHFYRGTGTNATSSFTQVI 211 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSE--KYSVQIYLEP 233 K G + +++ GGG + + + + F +++ + + +EP Sbjct: 212 K-PLLAIGQQLPDWQYLDFGGGFGYPYQHQKSAFDWQLFGEQITAELNQLDREIDLIIEP 270 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPYTA-- 290 G + + + TL T V+ ++ + A++ + + + P Sbjct: 271 GRSAIASCGTLLTQVVSTKWQSPKQIVGVDTTVANLSVPSVYGNYREIVPFSDTPNHYIT 330 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350 VCG + + D G+ +K GD ++ D Y + F P + Sbjct: 331 DVCGNTTYSRDYLGKNRQLPQLKRGDILAILDCGAYGYAMSSHFLHRPRPAEVLLKQGKH 390 Query: 351 IKAIREFSYN 360 + YN Sbjct: 391 QLIRQREDYN 400 >gi|50954436|ref|YP_061724.1| diaminopimelate decarboxylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950918|gb|AAT88619.1| diaminopimelate decarboxylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 471 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 53/410 (12%), Positives = 107/410 (26%), Gaps = 47/410 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++D+ ++ + A K+ A K F + + + Sbjct: 53 GTPLYVVDEAEVRERAADVRAAFQEAFAGVGTAAKVYYAGKAFLSIEVARWMAGAGLNID 112 Query: 57 SSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA-- 111 S E+ + + ++ K V + I+ ++V ++++ A Sbjct: 113 VCSGGELAVALAAGVAADRLGFHGNNKSEAEIEAAVSAGVGAIVIDSVQEIDRVAAAASR 172 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFH 164 + + + LR+N V + G D E GL H Sbjct: 173 HGVVQPVRLRVNSGVHAHTHAFLATAHDDQKFGIALPDAAAAVARIREHGSLAFLGLHGH 232 Query: 165 NNCENKSFLCFSAMLKNIEKEFGH--FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + F+ + + ++LGGG L Sbjct: 233 IGSQIFGADGFAESASRLLAVHRELLAGGDVPELNLGGGFGIAYTAADDPAPIAELAHRI 292 Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVL---------------DISENIK 256 + EPG +I+ TV + + Sbjct: 293 AETVAASCTRLGIPLPVVAFEPGRSIIGRAGLTLYTVGTTKEVLAAAQDGGETAVRRYVS 352 Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIG 315 + + + + A P V G+ C +GDI + G Sbjct: 353 VDGGMSDNARPALYEADYSARIAGRVSAAPPVLVRVAGKHCESGDIVVHAEYLPADTAPG 412 Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 D ++ Y + +N + P + ++ S D Sbjct: 413 DLLAVPATGAYCWTLASNYNYLGRPAVVAVRDGEARVIVKGESIEDLLAR 462 >gi|82703085|ref|YP_412651.1| Orn/DAP/Arg decarboxylase 2 [Nitrosospira multiformis ATCC 25196] gi|82411150|gb|ABB75259.1| ornithine decarboxylase [Nitrosospira multiformis ATCC 25196] Length = 391 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 63/354 (17%), Positives = 121/354 (34%), Gaps = 17/354 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ L+D + N V+ A+K + TL + G +S+ E+ Sbjct: 42 PFLLVDSNIIRNKARRFKAAMPR--VQPHYAVKANPDPRVLKTLIEEGVGFEIASISELD 99 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L Y+ K + + ++V +L K + K K+ LR Sbjct: 100 LLLSLNVPAADIYYSNPMKSRAYLEYAAAKGVEWYVLDSVEELRKI--VSVKPDAKLYLR 157 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I+ S + LA ++ D+ + ++ G+ FH + ++ + ++ Sbjct: 158 IDTPNIGSDWPLAGKFGTHVAEIKEIIDEAANLQADLAGVTFHVGSQCRNPQNWRVGIER 217 Query: 182 IEKEFGHF---ITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIYL--EPG 234 K F +++GGG ++ + + E I + EPG Sbjct: 218 AIKVFADMRQAGLSPRLLNIGGGYPVRHVKPIPSIEVIGEVVNEAIANLPENIRIMAEPG 277 Query: 235 EAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMV 292 +V++ V+ + K + D+ V V + + TGP V Sbjct: 278 RYLVSDAAYFVCRVVGTATRNGKRWMYWDAGVFGGVIEVTEGLRYEILSDRTGPSIPWSV 337 Query: 293 CGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 G +C + DI ++ GD I + Y + FNG +P + V Sbjct: 338 AGPTCDSVDILMRDELLPEDIEEGDFIYIPNAGAYTTAYASNFNGFPLPEVVVL 391 >gi|261757576|ref|ZP_06001285.1| LOW QUALITY PROTEIN: orn/DAP/Arg decarboxylase [Brucella sp. F5/99] gi|261737560|gb|EEY25556.1| LOW QUALITY PROTEIN: orn/DAP/Arg decarboxylase [Brucella sp. F5/99] Length = 306 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 152/250 (60%), Positives = 187/250 (74%) Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 GLR+NP VS S F LADP RPFSRLGE K+E + + G M HNNCEN F F Sbjct: 57 RGLRLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDR 116 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 ML +IE++FG + ++EW+SLGGGIHFT +DYPV FC RLK FSEK+ VQ+YLEPGEA Sbjct: 117 MLSDIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEAS 176 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSC 297 +T TTTL TVLD N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SC Sbjct: 177 ITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSC 236 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 LAGDIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Sbjct: 237 LAGDIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREF 296 Query: 358 SYNDYYNNLS 367 Y D+ +LS Sbjct: 297 DYADFEGSLS 306 >gi|86742407|ref|YP_482807.1| diaminopimelate decarboxylase [Frankia sp. CcI3] gi|86569269|gb|ABD13078.1| diaminopimelate decarboxylase [Frankia sp. CcI3] Length = 486 Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 126/399 (31%), Gaps = 39/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D+ A + R A + A K F + +++ + E Sbjct: 62 GTPAFVLDEAD--FRARCAAWRRAFAECDVYYAGKAFLCRTIARWVDEGGLNLDVCTGGE 119 Query: 63 VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F + ++ K AV I+ ++ +++ + A + ++ Sbjct: 120 LAVARSVGFPADRLLFHGNNKSVAELRAAVGYGVGRIVVDSFAEITRLAAVAAEAGVRQR 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC----------KDKIESEIKNVNGLMFHNNC 167 + +R+ P V + + G + + + GL H Sbjct: 180 VLIRVTPGVEAHTHHYVSTGQEDQKFGFSLAGGSAAEAVERVLAAAGSLELVGLHAHIGS 239 Query: 168 ENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVK----DFCQRLK 219 + F + ++ + LGGG+ D +RL Sbjct: 240 QIFDTAGFGLAAHRLVGLLARIRDTHDLELPELDLGGGLGIAYTGEDAPLEVTDVAERLT 299 Query: 220 EFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVP 270 K ++ +EPG AIV +TT V + E + V VD + ++ Sbjct: 300 AVVGKECAAAGLTVPRLAVEPGRAIVGSTTVTLYEVGTVKELPGLRTFVSVDGGMSDNIR 359 Query: 271 DYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAG 325 L + + + GR C +GD+ V+ GD ++ Sbjct: 360 TALYDARYTARLVSRTGLATTHVVTIVGRHCESGDVVAHDVPLPDDVRPGDLLAIPASGA 419 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y+ + + +N + P + +R + +D Sbjct: 420 YHRSMASNYNHVARPPVIAVRDGAARIIVRRETEDDLLR 458 >gi|254442821|ref|ZP_05056297.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Verrucomicrobiae bacterium DG1235] gi|198257129|gb|EDY81437.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Verrucomicrobiae bacterium DG1235] Length = 419 Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 131/388 (33%), Gaps = 35/388 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ + +L + L G+ A+K + +SS + Sbjct: 19 VGTPCYVYSEAELRASAKKVLAFPNAFGLTARYAMKASPNSNILRLFASMGMHFDASSGF 78 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 EV + + + + +++ ++ ++SQL +F + K+GL Sbjct: 79 EVRRAIAAGIEPKRISLSTQELPEDFASLVETGISVNVCSLSQLKRFG--SALPGSKVGL 136 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENKSFLCFS 176 R NP + + P S G + E + ++ H++ + S Sbjct: 137 RFNPGLGSGGTQRTNVGGPASSFGIWHEQLDEVKKVVEKYELDVFRIHSHIGSGSDPEVW 196 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY------S 226 + ++ + ++LGGG K ++ Q++K E++ Sbjct: 197 IRVVSMNLALVEAFPSVTNLNLGGGYKIGRIEGEKTTDLQVIGQKMKVEFEEFAARTGRE 256 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + +EPG +V N T++ + V D ++ + + +D+ + + + + Sbjct: 257 IHLEVEPGTYLVANCTSILSRVQDETSTGDSGYDFLKLDTGMTDNTRPSMYGAQHPMWVL 316 Query: 284 NT-----GPYTAMVCGRSCLAGDIFGEFHFEK---------PVKIGDRISFEDVAGYNIN 329 G +V G C +GDI + K+GD Y + Sbjct: 317 PADESERGEKEYIVVGHCCESGDILTPASGDPEGLAPRRLTEAKVGDFFVIGGAGAYCSS 376 Query: 330 RKN-WFNGINMPTIAVKNVDGTIKAIRE 356 +N + G + IRE Sbjct: 377 MAAKNYNSFPESAEVLVREGGRVAIIRE 404 >gi|27904869|ref|NP_777995.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46395814|sp|Q89AC6|DCDA_BUCBP RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|27904267|gb|AAO27100.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 418 Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 58/397 (14%), Positives = 118/397 (29%), Gaps = 43/397 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D ++ + + A K + + + +Y + SL E Sbjct: 24 GTPLWVYDSNIIVKKIKELSQFDV-----IRFAQKSCSNIHILNLFYKYNVKIDAVSLGE 78 Query: 63 VMLG-----HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 + + + + ++ V+ I ++ L + + Sbjct: 79 IERALISKYRFTMDQDVVFTSDIIERETLNKVVQYKIPINIGSIDMLEQVGKIS--PGHN 136 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFL 173 I LRINP + + S+ G + I + GL H Sbjct: 137 IWLRINPKFGHGHSKKTNTGGENSKHGIWDINLAFPYITKYNFKLIGLHMHIGSGVDYCH 196 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----------DFCQRLKEFSE 223 I++ +I IS GGG+ + +++ Sbjct: 197 LKRVCKAMIDQVL-QCKFKIHVISAGGGLTVPYHCNDEPVNVKNYFFLWNKARKIISNYL 255 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA--- 279 +++ +EPG +V + L + + I + I VDS + + Sbjct: 256 NRPIRLEIEPGRFLVAESGILVSEIRVIKKTNNRTFILVDSGFNDLIRPAMYGSYHHISV 315 Query: 280 -----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYN 327 A+VCG C +GD+F + V+IGD + F D Y Sbjct: 316 IPRDGRCVNYDDTIEAVVCGPLCESGDVFTQNEYGDIKTRILPNVQIGDFLVFHDTGAYG 375 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 376 ASMSSNYNSRPLIPEILFKDNEFHIIRRRQTMKELLE 412 >gi|183220822|ref|YP_001838818.1| diaminopimelate decarboxylase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910921|ref|YP_001962476.1| diaminopimelate decarboxylase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775597|gb|ABZ93898.1| Diaminopimelate decarboxylase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779244|gb|ABZ97542.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 422 Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 65/396 (16%), Positives = 133/396 (33%), Gaps = 35/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ ++++ D L G+++ A+K + + + +SS +E Sbjct: 23 GTPLFVYSEKEIEQKCDDTLAFPNAFGLQVRYAMKANPNSNILQIMKKKGILIDASSEHE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V+ F E+ ++ ++ QL F K + +R Sbjct: 83 VVRALHFGFSPESIMLTSQEFPKAFVELIGKGVKFNACSLRQLELFGQ--HFPGKSVSIR 140 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENKSFLCFSA 177 NP + D S G + E + N+ H + + S Sbjct: 141 FNPGLGSGHTKKTDVGGVTSSFGIWHEKLEEVKAIVNKYNLVVEKVHTHIGSGSDPEVWK 200 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--------KEFSEKYSVQI 229 + E+ + +SLGGG + Q + +EF++K+ ++ Sbjct: 201 AVAKYTLEYAESFPSVTVVSLGGGYKVGRMEDEKSTNLQTIGAPVKIQFEEFAKKHGRKL 260 Query: 230 Y--LEPGEAIVTNTTTLNTTV---LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 +EPG ++ L TTV +D ++ + +D+ ++++ L I Sbjct: 261 ILEIEPGTYLIALCGALLTTVDDKVDTGKHGFQFLKLDTGMDSNTRPSLYGARHPLITVK 320 Query: 285 T------GPYTAMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFEDVAGYNINRK 331 +V G C +GD+F + +IGD + E + Y + Sbjct: 321 KDGGIPSSHKEYVVVGHCCESGDVFTQKEGGEPITRLMGEAEIGDYVVMEAIGAYCSSMS 380 Query: 332 N-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365 +N + +G K IR + + + N Sbjct: 381 TKNYNSFPETAEVLLRKNGETKLIRKKEPVMEIFRN 416 >gi|332671323|ref|YP_004454331.1| diaminopimelate decarboxylase [Cellulomonas fimi ATCC 484] gi|332340361|gb|AEE46944.1| diaminopimelate decarboxylase [Cellulomonas fimi ATCC 484] Length = 481 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 58/423 (13%), Positives = 117/423 (27%), Gaps = 61/423 (14%) Query: 3 KTPYYLIDKQKLLNNLDT----ALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++D+Q L T AGV + A K F + + +++ Sbjct: 54 GTPAYVLDEQDLRTRARTYRRAFTEAFAEIGAGVDVYYAGKAFLSVAVARWVHEEGLRVD 113 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK 113 ++S E+ + G + K A + II +++ ++ + D Sbjct: 114 TASGGELAVALRAGVPGAEIGLHGNNKSDGEIAAALDAGVGRIIVDSLVEIERVADAVAA 173 Query: 114 ---LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------------------- 148 + +R+ V + G Sbjct: 174 RGGAPAPVMVRVTTGVHAGGHEYISTAHEDQKFGLSLAPSRGTADTVAAADDDSPAMTAL 233 Query: 149 -DKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIH 203 + + G+ H + F+ + + +E + LGGG Sbjct: 234 LAVVARPELRLLGIHSHIGSQILDPSGFAVAARAVLALRARLAARTGVLVEEVDLGGGYG 293 Query: 204 FTDKDYPVKDFCQRLKEFSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDIS 252 V R+ + + +EPG AIV +V + Sbjct: 294 IAYLPGEVALDADRIAKEVAASVERSAAEVGTDLPRFSIEPGRAIVGPAGLTLYSVGTVK 353 Query: 253 ENIKNLVIVDSS------VEAHVPDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDI 302 + + ++ L + P A V G+ C +GDI Sbjct: 354 PVRLDEGRTRLYVSVDGGMSDNIRPALYGAQYHAEVVGRLSTAEPVLARVVGKHCESGDI 413 Query: 303 FGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 V+ GD ++ Y + + +N + P + + +R + +D Sbjct: 414 VVHEVHLPGDVRAGDLLAVAATGAYGRSMASNYNLLTRPPVVAVREGASRVLVRRETVDD 473 Query: 362 YYN 364 Sbjct: 474 LLA 476 >gi|313238222|emb|CBY13314.1| unnamed protein product [Oikopleura dioica] Length = 415 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 47/385 (12%), Positives = 109/385 (28%), Gaps = 29/385 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61 P ++ + L +N+ + L + +L ++K + L G T+ S Sbjct: 28 PVFVYSENSLRSNVKSYLSGLDALKSMTQLNFSMKSNFNPAVIKVLKSAGVTGLTTVSGG 87 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKK 117 E+ L E + D E+ + I ++ + +A + Sbjct: 88 ELDLAAKLEFNSDKVIFNGNGKCDGEVRTAIERGHIINVDSWFDYVRISSTSRALNQKCQ 147 Query: 118 IGLRINPSVSYSKFILADP-NRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCEN 169 + +RINP++ + + G + E E ++ G+ H Sbjct: 148 VLIRINPNIDPKVHQYNTTASGKACKFGVIQEEISSLARKIFEDENLSLLGIHCHLGSTI 207 Query: 170 KSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 ++ + + +++GGG+ + + Sbjct: 208 NDLEPIRQCSTTLKIIMESIAHFLEPGRKVVNVGGGLAINYEKQAHGYPTPQEYTECFTN 267 Query: 226 S---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 I EPG ++V N+ L + + + + + + L Sbjct: 268 FGRDYLIIFEPGRSLVGNSAVCVGRSLGVKNDNILVTNMSMTEC--IRPALYQAFHLVTL 325 Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 V G C + D + ++ + DV Y + +N Sbjct: 326 TKKTSKADSKVFKVVGPVCESADFLNKAAELPSTIENNQLVVLWDVGAYCHVLSSNYNMR 385 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDY 362 + + R+ ++ D Sbjct: 386 PRRAEYLVTGSQFRQIRRQDTFEDM 410 >gi|323356878|ref|YP_004223274.1| diaminopimelate decarboxylase [Microbacterium testaceum StLB037] gi|323273249|dbj|BAJ73394.1| diaminopimelate decarboxylase [Microbacterium testaceum StLB037] Length = 476 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 53/405 (13%), Positives = 115/405 (28%), Gaps = 42/405 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYI------RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++D+ ++ + A R ++ A K F + + + Sbjct: 54 GTPLYVLDEDEVRTHARRARAAFDSAAERHGIRARVYYAGKAFLSTEVVRWVVDEGLAVD 113 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + E+ + ++ K AV +++ ++ ++ + A + Sbjct: 114 VCTRGELEVALAAGADPARLGFHGNNKSVGELERAVEVGIGSVVIDSPIEIERLAAIADR 173 Query: 114 --LHKKIGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFH 164 + + + +R+ V + G E E GL H Sbjct: 174 RGVVQSVLVRVRTGVHAETHAFLATAHEDQKFGFSLEGAAEAVARIRELPSLRFVGLHAH 233 Query: 165 NNCENKSFLCFSAMLKNIEKEFGH--FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + F + +I +++GGG + + + + Sbjct: 234 IGSQIFDSSGFRESAARLVDLHADLLAGGEIPVLNVGGGFGISYTSVDDPKPIEEIADGI 293 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDIS------ENIKNLVIVDSSV 265 + EPG IV V + + V VD + Sbjct: 294 LDAIADECAVRGIPMPDVATEPGRVIVGQAGVTLYEVGTVKTVTATENLERTYVSVDGGM 353 Query: 266 EAHVPDYLLYQ----ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320 + L + + P + V GR C +GDI + + V GD ++ Sbjct: 354 SDNARPALYGADFSARVVSRTSSATPALSRVVGRHCESGDIVVDAEYLPADVTPGDLLAV 413 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + +R + +D + Sbjct: 414 PATGAYCFSLASNYNYTPRPPVVAVRDGQARVIVRGETVDDLLSR 458 >gi|167524549|ref|XP_001746610.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774880|gb|EDQ88506.1| predicted protein [Monosiga brevicollis MX1] Length = 795 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 104/358 (29%), Gaps = 18/358 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ + + L A+K + + ++ G S E+ Sbjct: 439 PVYVYSRDMAFRQTQRLISNLNAVD-SLFFAIKANSHPDVLRAVHAAGAGFECVSQMEID 497 Query: 65 LGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 L F H + + + + + K+ LRI Sbjct: 498 LILSLFPDIDVRHLLFTPNFAARSEYEHALKLGVNVTVDNSFVLQEWHELFRGAKVLLRI 557 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSFLCFS 176 + S+ G + E + V GL H+ ++ ++ Sbjct: 558 DSGQGQGHHAHVKTGGSASKFGLDVHELAEVAQLCAAHGIEVFGLHCHSGSGVENTTLWA 617 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYL 231 L+ + K I++GGG+ + + + + E Q+++ Sbjct: 618 NHLQYLAKLAREHFPAARVINVGGGLSIPYTFGGAEVNLKAVDDALAAAKAEFPQFQVWM 677 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA--TIYPNTGPY 288 EPG I + V I + ++ + L I + P Sbjct: 678 EPGRFIAAQCGIVLAKVTQIKHKSGVKFVGVTAGMHTMIRPALYQAYHEVVNISRDGPPA 737 Query: 289 TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 A+VCG C +GD+F + GD + + Y + +N +P + Sbjct: 738 NAVVCGPICESGDVFARERPLPEDTREGDVLLIDCCGAYGFCMASTYNLRPLPEELIV 795 >gi|255074843|ref|XP_002501096.1| predicted protein [Micromonas sp. RCC299] gi|226516359|gb|ACO62354.1| predicted protein [Micromonas sp. RCC299] Length = 433 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 66/402 (16%), Positives = 125/402 (31%), Gaps = 43/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D +L A G+ + A+K + + +SS YE Sbjct: 27 GTPTYVYDLARLQEQATKAKAFPNAFGLTVRYAMKASPNAAILKVFRKAGLHIDASSGYE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V F + + + ++ + ++SQL + K+GLR Sbjct: 87 VHRAVKAGFQYDQISLSTQEFPDFFPELVDKGLKVNACSLSQLEAYGI--MFPGAKVGLR 144 Query: 122 INPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLCF 175 NP + + P S G K+ +E V+ + H + + Sbjct: 145 FNPGLGSGGTGKTNVGGPSSSFGIWHELLPEAKEIVERHGLIVDRIHTHIGSGSDPAVWQ 204 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230 + + +E ++LGGG Y Q + ++ + Sbjct: 205 KTSG--MSLDLCRQFPTVETLNLGGGYKVGRMSYEKSTDLQVVGSPVKELFQKFAEETGR 262 Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESAT 280 +EPG ++ N+ + TV D + + D+ + + L + Sbjct: 263 ELKLEIEPGTFLLANSCAVVCTVQDKVKTSDDADGHVFLKLDAGMTEVLRPSLYAAQHPL 322 Query: 281 IYPNTGPY------TAMVCGRSCLAGDIFGE---------FHFEKPVKIGDRISFEDVAG 325 + + + +V G C +GD+ V IGD + E Sbjct: 323 VTVSAAGELPKEHASYVVVGHCCESGDLMTPTPDDAEGIAERTMGAVDIGDLLVVEGAGA 382 Query: 326 YNINRKN-WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNN 365 Y + +N +K DGT+ IR+ + N Sbjct: 383 YCAGMSSKNYNSFPEAPEVMKGADGTMHLIRQKQTLEQILVN 424 >gi|186682256|ref|YP_001865452.1| Orn/DAP/Arg decarboxylase 2 [Nostoc punctiforme PCC 73102] gi|186464708|gb|ACC80509.1| Orn/DAP/Arg decarboxylase 2 [Nostoc punctiforme PCC 73102] Length = 414 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 51/378 (13%), Positives = 119/378 (31%), Gaps = 17/378 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ + L ++ + A + + G +++ + Sbjct: 36 GSPLYVYNGDHLRETIECITKAISYRRTQFRFASVTNGNIALLKIFRSFGWGLHANTPGD 95 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + LG F Y+ + + I + T+ ++++QL K H++ Sbjct: 96 IYLGLQAGFDPSEIVYSGSNLNRAEMIQVLNWGVTTLNLDSLAQLQ-LCCKVLPKHREKS 154 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+ ++ + ++GL F+ + F+ ++ Sbjct: 155 IRLGLRLNLPEITGDSRIGVRPEEFGDAIALTREVGLKLSGLHFYRGTGTNATEAFTQVI 214 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEK--YSVQIYLEP 233 + + E++ GGG + + + F L E + + +EP Sbjct: 215 DAVIAT-AQLLPDWEYLDFGGGFGYPYHHNKTAFDWEVFGAELSERITHLGRKIDLVIEP 273 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGP----- 287 G + + TL V+ + + +I + A++ + Sbjct: 274 GRSAIAGCATLLAQVVSVKWQGEKQIIGVDTTVANLSVPSVHGGYREIFTWKQADNLRSL 333 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 +T +CG + + D G+ ++IGD ++ DV Y + F P + Sbjct: 334 FTTDICGNTTYSRDYLGKNCQLPALEIGDIVAILDVGAYGYAMSSHFLHRPKPAEVLLEN 393 Query: 348 DGTIKAIREFSYNDYYNN 365 R Y+ N Sbjct: 394 GTHRLIRRREDYSVLLTN 411 >gi|116329346|ref|YP_799066.1| diaminopimelate decarboxylase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330051|ref|YP_799769.1| diaminopimelate decarboxylase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122090|gb|ABJ80133.1| Diaminopimelate decarboxylase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123740|gb|ABJ75011.1| Diaminopimelate decarboxylase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 422 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 60/396 (15%), Positives = 139/396 (35%), Gaps = 35/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ ++ + + D AL G+ + A+K + + + + + +SS YE Sbjct: 23 GTPIFVYSREGIEKSCDAALAFPNGYGLTVRYAMKANSNRTILEIIKRKGIQIDASSEYE 82 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V+ H F E + + ++ QL F + K++ +R Sbjct: 83 VLRAIHYGFKPEEIMLTSQELAKNLKEFVEKGVVFNACSLRQLEAFGNL--FPGKEVSVR 140 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFLCFSA 177 NP + + D S G ++ + + H + + S Sbjct: 141 FNPGLGSGQTKKTDVGGKTSSFGVWHEELNKVKEIASKYKLKIFKIHTHIGSGSDPEAWK 200 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFSEKYSVQI 229 + + + ++ + ++LGGG + + +EF++K+ + Sbjct: 201 AIAQVSLDIAAQFSECKILNLGGGFKVGRMEDEKTTNFQKIGKPVVELFQEFAKKHGTSL 260 Query: 230 Y--LEPGEAIVTNTTTLNTTVLDIS---ENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + +EPG ++ N ++ +TV D+ + V +D+ ++ + L + Sbjct: 261 HLEIEPGSFLMVNNGSIISTVDDVVSTGDGGYTFVKIDAGMDVNTRPSLYAARHPLVVVP 320 Query: 285 T------GPYTAMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFEDVAGYNINRK 331 + + G C +GD+F + ++GD + E Y + Sbjct: 321 KVETHSGKTASYVYVGHCCESGDLFTQAEGGGPVTRITGEAQLGDYVVMEGAGAYCSSMS 380 Query: 332 N-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365 +N + ++DG+ + IR + + N Sbjct: 381 TKNYNSFPETAEVLVDLDGSFQLIRKRQNLEQIFQN 416 >gi|83859343|ref|ZP_00952864.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Oceanicaulis alexandrii HTCC2633] gi|83852790|gb|EAP90643.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Oceanicaulis alexandrii HTCC2633] Length = 864 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 102/362 (28%), Gaps = 31/362 (8%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D + + I + + A+K + T+ + G S E+M Sbjct: 511 YVYDLETIKARASAVANI--KSVNRAFYAMKANPHPDVLKTIFEAGLGFECVSPGELMRL 568 Query: 67 HEKFG---GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG---- 119 + F + + + A I T ++ + G Sbjct: 569 KDTFPGLDPKKVLFTPNF-----AARHEYAAAIELGTNLTIDGLHPLTEWPELFKGVEVI 623 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173 LRINP P ++ G + V GL H Sbjct: 624 LRINPDRPRGHHQHVQTAGPKAKFGIPLDQLDAARDAAAKAGATVIGLHAHAGSGVIEAG 683 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-----SVQ 228 + + + + I +++GGG+ + + K + Sbjct: 684 HWREIGAILA-RAAEGFSDIRILNVGGGLGVPESAEAPALDLALVDAELAKLKQALPDYE 742 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI----YP 283 I++EPG V + L + V I I + + + + L + Y Sbjct: 743 IWMEPGRYPVAESGVLLSAVTQIKHAFGTRFIGLGTGMNSLIRPALYGARHEIVNLSRYD 802 Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 G A + G C + D+ G K GD I+ + Y + +N Sbjct: 803 EEGTGMASIVGPICESADLLGADRLMPETKEGDVIAIAEAGAYGAVMSSRYNLREPADEV 862 Query: 344 VK 345 V Sbjct: 863 VI 864 >gi|15606123|ref|NP_213500.1| ornithine decarboxylase [Aquifex aeolicus VF5] gi|2983314|gb|AAC06904.1| ornithine decarboxylase [Aquifex aeolicus VF5] Length = 390 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 125/357 (35%), Gaps = 22/357 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP L+D Q + Y + A+K + L + G +S E Sbjct: 38 KTPVLLMDIQGVKKKYLEVKYHFPEFN--VYYAVKANDDESVIRALVEVGAGFEVASSQE 95 Query: 63 VMLGHEKFGG--ETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + G + + N I+ A T ++++++ K KD A + + Sbjct: 96 LEKVLRLGGKIEKVISSNPVKPPEFIEFAYQKGVRTFAVDSITEVKKIKDIAPRSKVYVR 155 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + S + + E + + + G+ FH + + + Sbjct: 156 IAVPNEGS----DWPLSRKFGVSVEEAVEILEYANDLGLVPYGITFHVGSQCNNLRNWFI 211 Query: 178 MLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYP--VKDFCQRLKEFSEKY----SVQ 228 +K + + +++ +++GGGI V+D +K KY + Sbjct: 212 AVKLSAQLWEKARAKGLKLQMLNMGGGIPVRYNYEALSVEDIAYYVKGLMRKYFPVQPYE 271 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 + +EPG IV + + T V+ ++ +N + +D+ V + + L G Sbjct: 272 LQIEPGRGIVGDQGIMVTKVIGKAKRGSENWLYIDTGVFNGLAEALGGIRYPFFLEREGE 331 Query: 288 -YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + G SC + D+ + + ++GD + Y + FNG P + Sbjct: 332 LKEWTIGGVSCDSMDVVAKNVYLPEPEVGDYLYILSAGAYTTVYASNFNGFPKPEVV 388 >gi|320165468|gb|EFW42367.1| bifunctional aspartate kinase/diaminopimelate decarboxylase [Capsaspora owczarzaki ATCC 30864] Length = 1083 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 60/376 (15%), Positives = 115/376 (30%), Gaps = 38/376 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ + + + + + +L A+K + + D + G SL EV Sbjct: 710 PLYVYAESAIRRSASELSQLTALS--RLFYAMKANSNRQVLDLVASLGLGLECVSLGEVE 767 Query: 65 LGHEKFGG-----------ETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 L E + + + A+ + + +++ L + + Sbjct: 768 LAREVLSSLGPAAAANGTAAPIFFTPNFVQRSEYEGALAFSNVLVNVDSMYPLR--QWTS 825 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHN 165 + I LRI+P V S+ G D E NV GL H Sbjct: 826 TFAGQSIMLRIDPGVGAGHHDHVKTGGAASKFGISSADLAECAALCAEHRINVVGLHAHA 885 Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH-----FTDKDYPVKDFCQRLKE 220 + + + + ++LGGG+ + L Sbjct: 886 GSGILDPHQWVLHAELLASHAMRHFPRATILNLGGGVGVNPQCPQSDAFNFAQLNSLLTA 945 Query: 221 FSEKY-SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLL--YQ 276 FSEK+ ++++EPG +V + L V + + ++ + L Y Sbjct: 946 FSEKHPQFKLWMEPGRFVVAPSGVLLARVSQVKSKSGVTFVGLNAGMHNLIRPALYSAYH 1005 Query: 277 ESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINR 330 I + +V G C +GD+ G D I E V Y + Sbjct: 1006 GIHNISRFGMDGDRDTMSCVVVGPICESGDVLGRDRVLPASTSEDDVILIECVGAYGRSM 1065 Query: 331 KNWFNGINMPTIAVKN 346 + +N + + + Sbjct: 1066 ASTYNLRPVASEILAR 1081 >gi|167462581|ref|ZP_02327670.1| diaminopimelate decarboxylase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 390 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 110/361 (30%), Gaps = 37/361 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + + +++G ++ A K F M + S Sbjct: 30 GTPLYVVDETLVRQRCQEFVSAFRDSGLKFQVAYASKAFCVKAMCRVAVEEGMSLDVVSD 89 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+M E F E ++ K + + + + + ++ A Q L Sbjct: 90 GELMTALESGFPPERIHFHGNNKTPQEIEMALRAGIGCFVVDNFVEMQLLHSMAAEQGLR 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166 + LRI P V + S+ G + + E ++ G+ H Sbjct: 150 VNVLLRITPGVEAHTHEYISTGQTDSKFGFDLENGSAFQAVQEASRLESFHLLGIHSHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFC------- 215 + F ++ + + I+LGGG Sbjct: 210 SQIFEVEGFQIAVEKVAAFAVQVRDEMGISFQVINLGGGFGIRYTAEDTPLPVSQYVQAI 269 Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269 +K Y I ++EPG +IV + T TV I + V + + Sbjct: 270 TNSIKTCFASYKYPIPEIWVEPGRSIVGDAGTTLYTVGTIKDIPGVRKYVSVDGGMTDNP 329 Query: 270 PDYLLYQESATIYPNTGPYTA----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 L I N A V G+ C +GD+ V+ GD ++ Sbjct: 330 RPALYQSVYEAILANRAKEEAAEVISVAGKCCESGDMLIWDVKLPKVQTGDILAVFCTGA 389 Query: 326 Y 326 Y Sbjct: 390 Y 390 >gi|114331378|ref|YP_747600.1| ornithine decarboxylase [Nitrosomonas eutropha C91] gi|114308392|gb|ABI59635.1| ornithine decarboxylase [Nitrosomonas eutropha C91] Length = 390 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 107/354 (30%), Gaps = 17/354 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ ++D + N V A K + TL + G +S+ E+ Sbjct: 41 PFLMVDTAIIRNKARRFKAAMPR--VHPHYAAKANPDPRVLKTLIEEGVGFEIASIAELD 98 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L Y+ K + + ++V +L K + + Sbjct: 99 LLMGFGVPAAEIFYSNPMKSRAYLQYAAAKGVEWYVLDSVEELRKIVSIKADAKLYLRID 158 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 S + D+ ++ G+ FH + ++ + ++ Sbjct: 159 TPNIGSDWPLAGKFGTHLGD--VREIIDEAVKLNADLAGVTFHVGSQCRNPQNWRVGIER 216 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQIYL--EPG 234 + F ++LGGG ++ + + E I + EPG Sbjct: 217 AKTVFASMREAGLNPRLLNLGGGYPVRYVKPIPSIEIIAEVINEAIADLPQNIRIMAEPG 276 Query: 235 EAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMV 292 +V+++ V+ + K + D+ + + + + G V Sbjct: 277 RYLVSDSACFVCRVVGTATRNGKRWMYWDAGIFGGIIEVSEGLRYEILTQRNGSLVPWSV 336 Query: 293 CGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 G +C + D+ V+ D I + Y + + FNG +P + V Sbjct: 337 AGPTCDSVDVLMHDEMLPEDVREDDFIFIPNAGAYTTSYASNFNGFPLPDVIVV 390 >gi|221485097|gb|EEE23387.1| pyridoxal-dependent decarboxylase, putative [Toxoplasma gondii GT1] Length = 564 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 66/457 (14%), Positives = 118/457 (25%), Gaps = 95/457 (20%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR------------------------------------- 25 TP+YL D+ ++ N L Sbjct: 13 PTPFYLYDETRIRENCRRLLAAFSWASEPFSTSSQSALENAPRSPRESLENRLGVRSSYS 72 Query: 26 KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKD- 83 AG A+K + + L + G SSL E++L F GE + Sbjct: 73 AAAGFTNYFAVKATPTPAILEILREEGLGADCSSLAELLLAEAAGFRGERIFFTSNETPL 132 Query: 84 CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY------SKFILADPN 137 E I + S L+ +K I + + + Sbjct: 133 EEFLKARDLGAIINLDDASHLDFLHEKFGGALPSILCFRFNPSAESRQSTSQSNPVIMGH 192 Query: 138 RPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKS------FLCFSAMLKNIEKEFG 187 S+ G + V H + +L + Sbjct: 193 PKESKFGMTKTQLFHCLSRARSWGVRRFALHTMILSNCLSVDEVVETARLILTVAAEINE 252 Query: 188 HFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKY-------SVQIYLEPGEA 236 IE I+LGGG+ + + R++ + + ++ E G Sbjct: 253 RLGITIEMINLGGGLGVPYHPEEKDLNLHEVSARIRTWYKCTLALKGLAGTRLVTENGRF 312 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------- 289 I + L T V+ + K + VD+ + + + + Sbjct: 313 ITADAGVLVTRVIHHKKTYKRFIGVDACMAHLMRPGMYGAYHHISVVPDRDHDDPRLPSR 372 Query: 290 ---------------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 V G C D F V IGD + DV + Sbjct: 373 RNLFLSPEDDEEADDVSDNEIYDVVGGLCENNDKFAIDRPLPRVDIGDILLIHDVGAHGH 432 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + +NG ++ ++G + IR + D + Sbjct: 433 SMCFNYNGRLRCAEYLRRLNGEVVMIRRAETLKDLFA 469 >gi|241699676|ref|XP_002413144.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215506958|gb|EEC16452.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 443 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 64/383 (16%), Positives = 134/383 (34%), Gaps = 24/383 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++++D ++ + K V+ A+KC + + + + G +S E+ Sbjct: 31 PFFVVDVADIVYKIKLWK--LKIPRVEPFYAVKCNSDAAVLELMAGLGLGFDCASKAEID 88 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + Y K + + ++ +K K ++ +RI Sbjct: 89 VVRSLGVSPSRIIYANPCKTKSFIKHAAAQGVDLMTFDNEQELYKVKELFPLARLVIRIR 148 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L + +S +V G+ FH ++ + F+ +++ Sbjct: 149 VDDSGSVCQLGLKFGCEVSDAQHLLTIAKSLGLSVVGVSFHVGSNSREPMSFARAIESAR 208 Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPG 234 F +E + +GGG F E+ V++ EPG Sbjct: 209 LVFDQGLAMGFPMELLDIGGGYPGDRGFQKLFDKITQTINGSLALHFPEETGVRVISEPG 268 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----- 289 V + TL TTV+ E + + ++ D + + T++ + P Sbjct: 269 RFFVASAFTLYTTVIAKREVLLPGSALPRAMYYL-NDGVYGSFNCTVFDHAEPVPFALRG 327 Query: 290 ------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + G +C + D E + +GD + FE++ Y + + FNG +P + Sbjct: 328 GGPLRPCSLWGPTCDSMDQILEEALLPDLGVGDWVVFENMGAYTLCASSNFNGFQVPEVK 387 Query: 344 VKNVDGTIKAIREFSYNDYYNNL 366 +I +REF + ++ + L Sbjct: 388 YALTYASIAYLREFPFWEHLSRL 410 >gi|295394644|ref|ZP_06804863.1| diaminopimelate decarboxylase [Brevibacterium mcbrellneri ATCC 49030] gi|294972537|gb|EFG48393.1| diaminopimelate decarboxylase [Brevibacterium mcbrellneri ATCC 49030] Length = 479 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 59/408 (14%), Positives = 114/408 (27%), Gaps = 46/408 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV------KLLLALKCFAAWGMFDTLNQYMDGTT 56 +P ++ D + A K F + + G Sbjct: 58 GSPVFVFDVDDFQTRARDFAESFDREFAANGMTARGYYAGKAFLCTAVARWATEAGLGVD 117 Query: 57 SSSLYEVMLGHEKF--GGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKA-- 111 + +L E++ G + D E++ AV I+ +++ ++ + + A Sbjct: 118 TCTLGEMLTARAAGVDPGRVGLHGNNKSDAELEMAVSWGIGRIVVDSLDEIPRVERIAER 177 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLM 162 + + +R+ V + G E CK ++S ++ GL Sbjct: 178 CGVTAPVMVRVTVGVEAHTHDFIATAHEDQKFGLSLASGQALEACKKVLKSPHLDLVGLH 237 Query: 163 FHNNCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218 H + F +++ F + + LGGG + Sbjct: 238 SHIGSQIFDAEGFILAATRVIRLRATLQRDFGAPVAEVDLGGGFGIRYTSQDTPSSFADM 297 Query: 219 KEFSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA 267 + V+ EPG AIV V I + Sbjct: 298 ARKLARAVVRACEDEDTDLPNVSFEPGRAIVGPAAFTLYEVGTIKPVHTENGVRTYVSID 357 Query: 268 H---------VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDR 317 + D A + P V G+ C +GDI + V GD Sbjct: 358 GGMSDNARTALYDADYSCTLANRRSDAEPIVVRVVGKHCESGDIVVRDEYLPSDVSAGDL 417 Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT-IKAIREFSYNDYYN 364 I+ D Y + +N + P + ++ +Y+D + Sbjct: 418 IAVPDTGAYCKPLASNYNLVPRPGVLAVEEGRDPYWIVQPETYSDLFA 465 >gi|237842559|ref|XP_002370577.1| diaminopimelate decarboxylase, putative [Toxoplasma gondii ME49] gi|211968241|gb|EEB03437.1| diaminopimelate decarboxylase, putative [Toxoplasma gondii ME49] gi|221502696|gb|EEE28416.1| pyridoxal-dependent decarboxylase, putative [Toxoplasma gondii VEG] Length = 564 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/457 (14%), Positives = 118/457 (25%), Gaps = 95/457 (20%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR------------------------------------- 25 TP+YL D+ ++ N L Sbjct: 13 PTPFYLYDETRIRENCRRLLAAFSWASEPFSTSSQSALENAPRSPRESLENRLGVCSSYS 72 Query: 26 KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKD- 83 AG A+K + + L + G SSL E++L F GE + Sbjct: 73 AAAGFTNYFAVKATPTPAILEILREEGLGADCSSLAELLLAEAAGFRGERIFFTSNETPL 132 Query: 84 CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY------SKFILADPN 137 E I + S L+ +K I + + + Sbjct: 133 EEFLKARDLGAIINLDDASHLDFLHEKFGGALPSILCFRFNPSAESRQSTSQSNPVIMGH 192 Query: 138 RPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKS------FLCFSAMLKNIEKEFG 187 S+ G + V H + +L + Sbjct: 193 PKESKFGMTKTQLFHCLSRARSWGVRRFALHTMILSNCLSVDEVVETARLILTVAAEINE 252 Query: 188 HFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKY-------SVQIYLEPGEA 236 IE I+LGGG+ + + R++ + + ++ E G Sbjct: 253 RLGITIEMINLGGGLGVPYHPEEKDLNLHEVSARIRTWYKCTLALKGLAGTRLVTENGRF 312 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------- 289 I + L T V+ + K + VD+ + + + + Sbjct: 313 ITADAGVLVTRVIHHKKTYKRFIGVDACMAHLMRPGMYGAYHHISVVPDRDHDDPRLPSR 372 Query: 290 ---------------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 V G C D F V IGD + DV + Sbjct: 373 RNLFLSPEDGEEADDVSDDEIYDVVGGLCENNDKFAIDRPLPRVDIGDILLIHDVGAHGH 432 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 + +NG ++ ++G + IR + D + Sbjct: 433 SMCFNYNGRLRCAEYLRRLNGEVVMIRRAETLKDLFA 469 >gi|303290454|ref|XP_003064514.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454112|gb|EEH51419.1| predicted protein [Micromonas pusilla CCMP1545] Length = 437 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 66/402 (16%), Positives = 119/402 (29%), Gaps = 41/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D L AL G+ + A+K + +SS +E Sbjct: 29 GTPTYVYDAATLKAQAAKALDFPNAFGLTVRYAMKASPNAAILKIFRNAGLKIDASSGHE 88 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V F + + + ++ + ++SQL F A +IGLR Sbjct: 89 VRRAVRAGFDHADCSLSTQEFPEFFEELVKKGLKVNACSLSQLEAFG--AAFPGAEIGLR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFHNNCENKSFLCFSA 177 NP + + P S G + E+ E + + H + + S Sbjct: 147 FNPGLGSGGTGKTNVGGPSSSFGIWHELLPEARAICEKHGLKVVRIHTHIGSGSDPAVWQ 206 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY------- 230 + + +E ++LGGG Y + + Sbjct: 207 KTSGMSLDLCREFPTVETLNLGGGYKVGRMAYEKSTDLAVVGAPVKALFEAFAKETGREL 266 Query: 231 ---LEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDYLLYQESATI 281 +EPG ++ N+ + TV D + +D+ + + L + + Sbjct: 267 RLEIEPGTFLLANSCAIVCTVQDKVTTGAASDGGHVFLKLDAGMTEVLRPSLYAAQHPLV 326 Query: 282 Y-------PNTGPYTAMVCGRSCLAGDIFGE---------FHFEKPVKIGDRISFEDVAG 325 G +V G C +GD+ V+ GD + E Sbjct: 327 TVSAATGKEPEGTEKYVVVGHCCESGDLMTPGPDDAEEIAERAMGEVERGDLLVVEGAGA 386 Query: 326 YNINRKN-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365 Y +N ++ +GT IR + S N Sbjct: 387 YCAGMSGKNYNSFPEAPEVMRTAEGTFHVIRKKQSLEQIMAN 428 >gi|293189484|ref|ZP_06608204.1| diaminopimelate decarboxylase [Actinomyces odontolyticus F0309] gi|292821574|gb|EFF80513.1| diaminopimelate decarboxylase [Actinomyces odontolyticus F0309] Length = 466 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 52/413 (12%), Positives = 115/413 (27%), Gaps = 51/413 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDG 54 TP +++D + + G A K F + + + G Sbjct: 48 GTPTFVLDVEAMRGRARVWASAMAEEFWDGYGMNGGDAFYAGKAFLSADVARLVAAEGMG 107 Query: 55 TTSSSLYEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA 111 ++SL E+ L G + + K A+ + I +++ ++++ + A Sbjct: 108 IDTASLGELSLALRAGVGPDRIGLHGNNKSDAEIRLALQAGIHRIFIDSMDEVHQIERIA 167 Query: 112 QKLHKKIGLRIN--PSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNG 160 L + + + + G E ++ + G Sbjct: 168 ADLGVVAPVMVRLKSGIHAGGNEYIATAHEDQKFGLSLATGQAYEAVAVIKDAAHLDFRG 227 Query: 161 LMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-- 214 L H + ++ + I LGGG+ Sbjct: 228 LHSHIGSQIFGTEAFAEAARIVIDFAALLKAELGLDVPAIDLGGGVGIAYTGQDPVPTSP 287 Query: 215 -------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNL 258 ++E + + +EPG +I + + V + + + Sbjct: 288 VEVARALATVVRERCAHHGLPIPHVSVEPGRSIAGPSMVMLYRVGVVKDISLEDGGVRRY 347 Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPY------TAMVCGRSCLAGDIFGEFHFEK-P 311 V +D + ++ L N P + G+ C +GDI Sbjct: 348 VAIDGGMSDNIRPVLYDAAYTATLANRDPADASELARCRIVGKHCESGDIIIRDIDLPAD 407 Query: 312 VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + GD ++ V Y + + +N + P + IR + + Sbjct: 408 IAGGDLLAVPAVGAYGYSMASNYNMLTKPGVLAVEDGSARWFIRPQTVDHLLA 460 >gi|323447664|gb|EGB03577.1| hypothetical protein AURANDRAFT_39321 [Aureococcus anophagefferens] Length = 463 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 71/402 (17%), Positives = 127/402 (31%), Gaps = 42/402 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D L+ + AL GV + A+K + +SS+YE Sbjct: 56 GTPCYVYDAPTLVARAEEALAFPNAFGVTVRYAMKACPNGAVLRLFESMGLHFDASSVYE 115 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V + + D + ++ + +++QL F A +G+R Sbjct: 116 VRRALAAGIAASKISLSTQQLDDDFGDLVKEGLKVNACSLAQLEAFG--AAFPGADVGVR 173 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSFLCF 175 NP V + P S G +D E NV + H + + + Sbjct: 174 FNPGVGSGGTSKTNVGGPSSSFGIWHEDFDEVAAIAGKHDLNVVRVHTHIGSGSDAAVWQ 233 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKYSVQI-- 229 + + ++ ++LGGG Y + + +K E Y+ + Sbjct: 234 R-VSRMSLDLCERLGGTVKTLNLGGGYKVGRMAYEQSTDLSVVGEPVKAEFEAYAERTGD 292 Query: 230 ----YLEPGEAIVTNTTTLNTTVLDISENI-----KNLVIVDSSVEAHVPDYLLYQESAT 280 +EPG +V N L TT+ D++ + + +D + + L + Sbjct: 293 ELKLEVEPGTFLVANAGALVTTIQDVTSTKGSEAGNDFLKLDCGMTEVLRPSLYGAQHPL 352 Query: 281 IYP------NTGPYTAMVCGRSCLAGDIFGEF---------HFEKPVKIGDRISFEDVAG 325 + N +V G C +GD+ GD + E V Sbjct: 353 VVVKRDGTLNDEHKPYVVVGHCCESGDLLTPAPDEPETLASRDLAAADRGDLMVVESVGA 412 Query: 326 YNINRKN-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365 Y +N + + DG IR S + N Sbjct: 413 YCAAMSTAGYNSFPSAPEVLHDKDGNFHLIRKRSSLDQLTMN 454 >gi|209526903|ref|ZP_03275422.1| Diaminopimelate decarboxylase [Arthrospira maxima CS-328] gi|209492682|gb|EDZ93018.1| Diaminopimelate decarboxylase [Arthrospira maxima CS-328] Length = 413 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 52/374 (13%), Positives = 120/374 (32%), Gaps = 17/374 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ + L + ++ + A + Q G +++ + Sbjct: 32 GSPLYVYNADILQDTINHIGGAVNYPKTRFKFASVTNGNIALLKIFQQANWGLHANTPGD 91 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 LG F + Y+ + + +L N +++ QL F + Q+L Sbjct: 92 AFLGLKAGFHPQQIVYSGSNLNHREFQLLLNWGITTYNLDSLDQLQLFGEVFQQLKLDFL 151 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 ++ ++ + + + S + GL F+ + F+ ++ Sbjct: 152 PKLGFRLNLPEINGDSRIGVNPQEFPEAIKIAASAGLKITGLHFYRGTGTNATSSFTQVI 211 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSE------KYSVQI 229 K G + +++ GGG + + + F Q++ + + Sbjct: 212 K-PLLAIGQQLPDWQYLDFGGGFGYPYQHQKSAFDWHFFGQQITAELTQLNRELNREIDL 270 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPY 288 +EPG + + + TL T V+ ++ + A++ + + + P Sbjct: 271 IIEPGRSAIASCGTLLTQVVSTKWQPPKQIVGVDTTVANLSVPSVYGNYREIVSFSDTPN 330 Query: 289 TA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 VCG + + D G+ +K GD ++ D Y + F P + Sbjct: 331 HYITDVCGNTTYSRDYLGKNRQLPQLKRGDILAILDCGAYGYAMSSHFLHRPRPAEVLLQ 390 Query: 347 VDGTIKAIREFSYN 360 + YN Sbjct: 391 QGKHQLIRQREDYN 404 >gi|217077735|ref|YP_002335453.1| ornithine decarboxylase [Thermosipho africanus TCF52B] gi|217037590|gb|ACJ76112.1| ornithine decarboxylase [Thermosipho africanus TCF52B] Length = 387 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 57/375 (15%), Positives = 123/375 (32%), Gaps = 22/375 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D + + +N + KN+ K+ A+K + + L +S E Sbjct: 18 GTPILVMDLEVVRDNYKRLVENVKNS--KIYYAVKANSHIEILKLLRDLGSYFDVASRPE 75 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKAQKLHKKIG 119 + E ++ K A +F ++ ++ K A + Sbjct: 76 IEKLLSIGVEPERMSFGNTIKKSSDIAFAYEKGIKMFAVDSEMEIEKIAKNAPGSDIYVR 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + N + + L S N G+ FH +N + + + Sbjct: 136 ISTNGMEDDADWPLTKKFGTSVDHAISLVKYAYSLGLNPIGVSFHVGSQNYNPENWRVAI 195 Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKY---SVQIYL 231 + + F +++ ++ GGG+ V++ + E Y V + L Sbjct: 196 REVSVVFEEARRMGIEMKMVNTGGGMPVKYSKNIPTVEEISAVINEAIADYIGEDVTVIL 255 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGP 287 EPG ++V N T+ T+V+ S+ + I + H + + + Sbjct: 256 EPGRSMVGNAGTMITSVILRSQKGEEKWIYTDAGVFHGLTETIQNIRYEVEVIGKEDEEK 315 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ G +C + D+ + D + + Y FNGI P I Sbjct: 316 EKFVLAGPTCDSVDVMYYDINLPKTTTMDDLVVLYNTGAYTTEYGTNFNGIPSPKIIF-- 373 Query: 347 VDGTIKAIREFSYND 361 + +++ + + Sbjct: 374 --ESSIFVKQELFEE 386 >gi|325919586|ref|ZP_08181598.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas gardneri ATCC 19865] gi|325549922|gb|EGD20764.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas gardneri ATCC 19865] Length = 869 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 111/365 (30%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + I + A+K A + L Q G S E Sbjct: 506 GTPRYVYHLPTVRARAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + ++ E +A + T+ + V L ++ + + + Sbjct: 564 LRRVFDTLPELSPRRVLFTPSFAPKAEYEAGFALGVTVTVDNVEALRRWPEV--FRGRNV 621 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ + + + G+ H ++ Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVELARTLEVTITGVHAHLGSGVETG 681 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + + Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLELWAKGLAEVKAVHPGY 740 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L V I ++ V +D+ + + L + Sbjct: 741 RLAIEPGRYLVAEAGVLLAQVTQVIEKDGVQRVGLDAGMNTLIRPALYDAWHDIENLSQL 800 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341 + G C + D+FG+ GD + D Y + + +N +P Sbjct: 801 DAPADGAFDIVGPICESSDVFGKRRRLPAATAPGDVMLVADSGAYGYSMASTYNQRELPR 860 Query: 342 IAVKN 346 V + Sbjct: 861 EEVID 865 >gi|195953881|ref|YP_002122171.1| Ornithine decarboxylase [Hydrogenobaculum sp. Y04AAS1] gi|195933493|gb|ACG58193.1| Ornithine decarboxylase [Hydrogenobaculum sp. Y04AAS1] Length = 400 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 118/364 (32%), Gaps = 26/364 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP +I+ ++ K K+ A+K + LN G +S + Sbjct: 43 VKTPTLVINLDRIKERFIELQEALKE--AKIYYAVKANDHQEILALLNDLGSGYEVASSW 100 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ G + K + ++ +++K K A + I Sbjct: 101 ELEKVLRLGVDGSRIISSNPVKPLDFIDYAYKSGIKAFSIDSYKEIDKLKKIAPRSRVYI 160 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176 L + S + L ++ + G+ FH + + + Sbjct: 161 RLIVPNEGSDWPLTNKFGVDVDTALDI----LEYAKYQGFVPYGITFHVGSQCNNLRNWF 216 Query: 177 AMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSV 227 +K + + ++ ++LGGGI + L+++ + Sbjct: 217 IGIKKAWELWEKAIYKDIKLTMLNLGGGIPVNYQYESLSIRDIGSYIEALLQKYFLIKPM 276 Query: 228 QIYLEPGEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++ +EPG +V + L ++V+ I+ + +D+ V + + L Sbjct: 277 EVQIEPGRGLVGDAGVLVSSVIGKTTKYINGEESYWIYLDTGVFNGLAEVLGGISYPMYA 336 Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 G + G SC + DI F + V IGDR+ Y FNG +P Sbjct: 337 EQKGEIKPYTIAGVSCDSMDIISNFTYLPEVDIGDRVYIMATGAYTTVYAANFNGFGIPE 396 Query: 342 IAVK 345 Sbjct: 397 TVFV 400 >gi|260906191|ref|ZP_05914513.1| diaminopimelate decarboxylase [Brevibacterium linens BL2] Length = 478 Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 63/409 (15%), Positives = 120/409 (29%), Gaps = 47/409 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYI--------RKNAGVKLLLALKCFAAWGMFDTLNQYMDG 54 TP ++D + + + AGV + A K F + +++ G Sbjct: 59 GTPTLVMDVADFKARAENYVSAYSAAFSEDKGLAGVDVFYAGKAFLCTAVARWVHESGLG 118 Query: 55 TTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA 111 + SL E+M+ GE + K I +++ +++ + A Sbjct: 119 VDTCSLGEMMVARAAGVPGERVGLHGNNKSAAELEYALDYGVGRIFVDSLDEISLLESIA 178 Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI---------ESEIKNVNG 160 + + + LR+ V + G S +G Sbjct: 179 AARGVLAPVMLRVTVGVEAHTHDFIATAHEDQKFGLSVSAGTAAKAAEAVANSAHLRFDG 238 Query: 161 LMFHNNCENKSFLCFSAMLKNIEKE----FGHFITQIEWISLGGGIHFTDKDYPVKDFCQ 216 L H + F + + I LGGG Sbjct: 239 LHSHIGSQIFDISGFQVAAARVLALRAEIMAEHGVDLPDIDLGGGFGIRYTSQDTPIPVA 298 Query: 217 RLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTV-----LDISENIKNLVI 260 + + + +I +EPG AIV+ + V +D ++ V Sbjct: 299 EMAQELAEVVAKECRGLGTNVPRISIEPGRAIVSPSMFTLYQVGTVKEVDTDNGLRTYVA 358 Query: 261 VDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIG 315 VD + ++ L + + N + P V G+ C +GDI + V G Sbjct: 359 VDGGMSDNIRTALYDADYSCTLANRNSGSEPVIVRVVGKHCESGDIIVRDEYMGSDVSSG 418 Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 D ++ Y + N +N + P + D + Y+ Sbjct: 419 DLVAVPSTGAYCRSLANNYNHLPKPGVLAVTTDKVEWIVTPEDYSQMLR 467 >gi|327261305|ref|XP_003215471.1| PREDICTED: ornithine decarboxylase-like [Anolis carolinensis] Length = 460 Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 65/394 (16%), Positives = 118/394 (29%), Gaps = 46/394 (11%) Query: 6 YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 +Y+ D L +L V A+KC + + L G +S E+ Sbjct: 40 FYVADLGDVLKKHLRWYK---ALPRVSPFYAVKCNDSIAVVKILAALGAGFDCASKTEIQ 96 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L E Y K +N + S++ K K+ LRI Sbjct: 97 LVQSVGVPPERIIYANPCKQVSQIKHAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA 156 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S + L+ + ++ + ++ G+ FH F + + Sbjct: 157 TDDSKAVCRLSVKFGATLKTSRLLLERAKELDLDIIGVSFHVGSGCTDPETFVQAISDAR 216 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234 F + + +GGG ++ + K F V+I EPG Sbjct: 217 CVFDMGAELGFSMYLLDIGGGFPGSEDVKLKFEEITNVINPALDKYFPSDSGVKIIAEPG 276 Query: 235 EAIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHV 269 V + TL ++ +++ + AHV Sbjct: 277 RYYVASAFTLAVNIIAKKVVIKEQTGSDDEEEQNDKTLMYYVNDGVYGSFNCILYDHAHV 336 Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 L + Y+ + G +C D E +++GD + FE++ Y + Sbjct: 337 KPVLQKRPKPDERY----YSCSIWGPTCDGLDRIVELCAMPELQVGDWMLFENMGAYTVA 392 Query: 330 RKNWFNGINMPTIAVKNVDGTIKA---IREFSYN 360 + FNG PTI + I+E + Sbjct: 393 AASTFNGFQRPTIYYVMSRPAWQLMEQIKEQGFQ 426 >gi|289667155|ref|ZP_06488230.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 711 Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 109/365 (29%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + I + A+K A + L Q G S E Sbjct: 348 GTPRYAYHLPTVRERAHALAQIAAVD--QRYYAIKANAHPAILIALEQAGFGLECVSHGE 405 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + ++ E +A + T+ + V L + + I Sbjct: 406 LRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPQL--FRGRNI 463 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ + + + G+ H ++ Sbjct: 464 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVEVARTLEVTITGVHAHLGSGVETG 523 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + Sbjct: 524 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLDVWAKGLAEVKAVHPGY 582 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L +V I ++ V +D+ + + L + Sbjct: 583 RLAIEPGRYLVAEAGVLIASVTQVIEKDGVERVGLDAGMNTLMRPALYDAWHDIENLSRL 642 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341 T + G C + D+FG+ GD + D Y + + +N +P Sbjct: 643 DAPADGTFDIVGPICESSDVFGKRRRLPSATAPGDVVLVADTGAYGYSMASTYNQRELPR 702 Query: 342 IAVKN 346 V + Sbjct: 703 EEVID 707 >gi|239617956|ref|YP_002941278.1| Ornithine decarboxylase [Kosmotoga olearia TBF 19.5.1] gi|239506787|gb|ACR80274.1| Ornithine decarboxylase [Kosmotoga olearia TBF 19.5.1] Length = 386 Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 128/364 (35%), Gaps = 21/364 (5%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +++TP+ ++D + + N +R V++ A+K + + L +S Sbjct: 13 VLQTPFLVMDLKYVEKNYYDL--VRNIKDVRVFYAVKANSHPRIISLLRDLGSSFDVASR 70 Query: 61 YEVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ E ++ + A + ++ ++ K A Sbjct: 71 GEIEKLLSLDVPAEKLSFGNTIKKVEDIAYAHSVGIEYFAVDSEMEVEKIAAHAPGSKVY 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + + S L+ + + G+ FH +N S + Sbjct: 131 GRIATSGADSDW--PLSRKFGTDVEHVISILEYASRLGLDAYGVSFHVGSQNYSVKNWET 188 Query: 178 MLKNIEKEF---GHFITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKY-----SV 227 +++ K F + ++LGGGI + +++ + EKY ++ Sbjct: 189 AIQDASKVFKALRAKGVNLRMLNLGGGIPVKHVREIPSIEEIAACINASIEKYLGFVPNL 248 Query: 228 QIYLEPGEAIVTNTTTLNTTVL-DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 ++++EPG ++V + + T+V+ + ++ + +D+ V + + + I Sbjct: 249 EVFIEPGRSMVGDAGIMVTSVILKSKKGNEDWLYIDAGVFHGLTETIENFRYEVITDVED 308 Query: 287 P--YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 T + G SC + D + + GD + F + Y FNGI P I Sbjct: 309 NNLKTFHLAGPSCDSVDTIYDDIKLPRSISYGDILYFLNAGAYTTEYGTHFNGIEPPRIY 368 Query: 344 VKNV 347 + Sbjct: 369 FVDE 372 >gi|227872752|ref|ZP_03991075.1| possible diaminopimelate decarboxylase [Oribacterium sinus F0268] gi|227841413|gb|EEJ51720.1| possible diaminopimelate decarboxylase [Oribacterium sinus F0268] Length = 394 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 60/380 (15%), Positives = 117/380 (30%), Gaps = 29/380 (7%) Query: 16 NNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGE 73 + N G K A+K + L + G SS E+ + F G+ Sbjct: 1 DTARKLYKAFSWNPGFKEYFAIKATPNTAILRILKEEGCGVDCSSKVELTMAEACGFKGQ 60 Query: 74 THAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFI 132 ++ + E I + S + + ++ L K + LR NP + Sbjct: 61 EIMFSSNDTPEEEYIFAKELGGIINLDDFSNIAEVEETLGTLPKTMSLRFNPGGYFKIAN 120 Query: 133 LADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFH------NNCENKSFLCFSAMLKNI 182 N ++ G +E + K V H + + + + Sbjct: 121 TIMDNPEEAKFGMTEAQILEGYKILKEKGVEHFGIHAFLASNTVSNEYYPVLARQLFQLV 180 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-----------SVQIYL 231 + +++++L GGI + + + + ++ +++ Sbjct: 181 VRIKKELGISLDFVNLSGGIGIPYRPEQEPNDILLIGQGVKEVFEEILVPNGLGHIRLCT 240 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY--- 288 E G ++ L T V+ E ++ VD+ + + Sbjct: 241 ELGRFMLAPYGALITKVIHFKETYRHYAGVDACAANLMRPAIYDAYHHITVLGKEEEKET 300 Query: 289 -TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 T V G C D F + ++ GD + F D + +NG + Sbjct: 301 KTYDVVGSLCENNDKFAKNRELPVLEKGDYLFFHDAGAHGFAMGYNYNGKLWCAELLLKE 360 Query: 348 DGTIKAIRE-FSYNDYYNNL 366 DGT+K IR DY+ L Sbjct: 361 DGTVKCIRRAQRDTDYFATL 380 >gi|148272332|ref|YP_001221893.1| hypothetical protein CMM_1152 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830262|emb|CAN01196.1| lysA [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 499 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 55/432 (12%), Positives = 110/432 (25%), Gaps = 69/432 (15%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN------AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++D+ + L ++ A K F + + + + Sbjct: 52 GTPLYVMDEDDVRGRAAETLAAFTREAAAVGTSARVYYAGKAFLSIEVARWMVEEGLHID 111 Query: 57 SSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113 S E+ + ++ K I+ ++ ++ + A Sbjct: 112 VCSGGELAVALAGGADPARLGFHGNNKSVAEIDRAVGAGIGQIVVDSAIEVERVAAAAAA 171 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFH 164 + + LR+N V R + G D + GL H Sbjct: 172 HGRVQPVRLRVNSGVHAHTHEYLATAREDQKFGITLADAPGLVARIRSHATLSFTGLHAH 231 Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFITQ--IEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + F + + + + ++LGGG + Sbjct: 232 IGSQIFETDAFVESARRLLDLHERLLADGPVPELNLGGGFGIAYTSVDRPVPVPEIARRL 291 Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------------------ 253 I +EPG +IV +T TV + + Sbjct: 292 AHIVGDECGRRGISVPVIAVEPGRSIVGPSTVTLYTVGTVKDVLVTVGGVDGEVAEASSA 351 Query: 254 ---------------NIKNLVIVDSSVEAHVPDYLLYQ----ESATIYPNTGPYTAMVCG 294 ++ V VD + + L A P + G Sbjct: 352 TGDVEDPRVAEEAETAVRRYVSVDGGMSDNARPALYGADYSVRIAGRASAADPALVRIAG 411 Query: 295 RSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 + C +GD + + V+ D ++ Y + +N I P + Sbjct: 412 KHCESGDLVVLADYLPGDVRADDLVAVPATGAYCWALASNYNWIGRPPVVAVRDGEARVI 471 Query: 354 IREFSYNDYYNN 365 +R + D Sbjct: 472 VRGETEADLLAR 483 >gi|323141851|ref|ZP_08076715.1| lysine/ornithine decarboxylase [Phascolarctobacterium sp. YIT 12067] gi|322413691|gb|EFY04546.1| lysine/ornithine decarboxylase [Phascolarctobacterium sp. YIT 12067] Length = 401 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 114/359 (31%), Gaps = 18/359 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ +++ N VK+ A+K + + +S E Sbjct: 22 GTPLLVLSLEEIKKNYKVLKKYMPR--VKIHYAIKANPHPEILRVMADMGSCFDVASDGE 79 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + H+ G Y K + F++ S+++K K + + Sbjct: 80 IRTMHDMGVDGGRLIYANPVKTGVGLEACRSCGVRKMTFDSASEIDKIKKQCPDATVLLR 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRI+ S ++ + L + + ++ G+ FH + S + L Sbjct: 140 LRIDNSSAHVDLNKKFGAARENALA--LMQQAKEAGLDMAGIAFHVGSQTVSADPYLHAL 197 Query: 180 KNIEKEFGHF---ITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYSVQ--IYLE 232 + F ++ + +GGG + + + + +++ ++ I+ E Sbjct: 198 DIARELFEEAEAAGLKLRILDVGGGFPIPEPKVKFNLPEMLRQINARLDEDFADAEIWAE 257 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVD----SSVEAHVPDYLLYQESATIYPNTGPY 288 PG I L T+V+ ++E + V + + Sbjct: 258 PGRYICGTAVNLITSVIGVTERGGQPWYFLNEGLYGTFSGVLFDQWDFKLISFREGEEKV 317 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 A G SC + DI P+++GD + Y FNG + + Sbjct: 318 AATFAGPSCDSLDIMFRGRLTVPLQVGDLLLVPSCGAYTSASATTFNGFSKAKFVIWER 376 >gi|309798991|ref|ZP_07693248.1| diaminopimelate decarboxylase [Streptococcus infantis SK1302] gi|308117395|gb|EFO54814.1| diaminopimelate decarboxylase [Streptococcus infantis SK1302] Length = 394 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 52/366 (14%), Positives = 104/366 (28%), Gaps = 28/366 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNKAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G ++ D E TI + + + A Sbjct: 79 ELLMSHKLGFTGADMMFSSNNTPDREYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169 V + D ++ G + E+ + ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKEQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E + + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRQVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 I+ E G ++ L T V + + + VD+S + + Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGILVTKVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 V G C D F +IGD + D + + +N Sbjct: 318 HITNMMHPDGQTEVVDVVGSLCENNDKFAVNRELPQTEIGDLLVIHDTGAHGFSMGYQYN 377 Query: 336 GINMPT 341 Sbjct: 378 AKLRSA 383 >gi|315604826|ref|ZP_07879885.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313497|gb|EFU61555.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 180 str. F0310] Length = 466 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 52/411 (12%), Positives = 115/411 (27%), Gaps = 49/411 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDG 54 TP +++D L +G A K F + + + + G Sbjct: 50 GTPTFVLDVASLRGRARVWASAMAEEFWEGYGMSGGDAFYAGKAFLSADVARIVAEEGLG 109 Query: 55 TTSSSLYEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA 111 ++SL E+ L + K A+ + I +++ ++ + + A Sbjct: 110 VDTASLGELTLALRAGVDPSRIGLHGNNKSDREIRLALEAGIHRIFIDSMDEVRQVERIA 169 Query: 112 QKLHKKIGLRIN--PSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNG 160 + + + + + G E + + ++ G Sbjct: 170 ADMGVSAPVMVRLKSGIHAGGNEYIATAHEDQKFGLSLASGQALEAVRAIQRAPHLDLRG 229 Query: 161 LMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-- 214 L H + ++ ++ I LGGG+ Sbjct: 230 LHSHIGSQIFGTAAFVEAARKVIDFAALVRERLGLEVSAIDLGGGVGIAYTAQDPVPTSP 289 Query: 215 -------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNL 258 ++E + ++ +EPG +I + + V + + + Sbjct: 290 VEVARALAGVVRERCAHHGLPIPRVTVEPGRSIAGPSMVMLYRVGVVKDVSLEGGGVRRY 349 Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEK-PVK 313 V +D + ++ L N T V G+ C +GDI + Sbjct: 350 VAIDGGMSDNIRPVLYGAAYTATLANRDGSTALARCRVVGKHCESGDIVVRDVDLPADIA 409 Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 GD ++ V Y + + +N P + +R S + Sbjct: 410 GGDLLAVPAVGAYGYSMASNYNMATKPGVLAVEDGEAHWFLRPQSVDHLLA 460 >gi|289664589|ref|ZP_06486170.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 869 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 110/365 (30%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + I + A+K A + L Q G S E Sbjct: 506 GTPRYAYHLPTVRERAHALAQIAAVD--QRYYAIKANAHPAILIALEQAGFGLECVSHGE 563 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + ++ E +A + T+ + V L + + + I Sbjct: 564 LRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEL--FRGRNI 621 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ + + + G+ H ++ Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVEVARTLEVTITGVHAHLGSGVETG 681 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLDVWAKGLAEVKAVHPGY 740 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L +V I ++ V +D+ + + L + Sbjct: 741 RLAIEPGRYLVAEAGVLIASVTQVIEKDGVERVGLDAGMNTLMRPALYDAWHDIENLSRL 800 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341 T + G C + D+FG+ GD + D Y + + +N +P Sbjct: 801 DAPADGTFDIVGPICESSDVFGKRRRLPSATAPGDVVLVADTGAYGYSMASTYNQRELPR 860 Query: 342 IAVKN 346 V + Sbjct: 861 EEVID 865 >gi|227536835|ref|ZP_03966884.1| diaminopimelate decarboxylase [Sphingobacterium spiritivorum ATCC 33300] gi|227243262|gb|EEI93277.1| diaminopimelate decarboxylase [Sphingobacterium spiritivorum ATCC 33300] Length = 355 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 61/335 (18%), Positives = 105/335 (31%), Gaps = 26/335 (7%) Query: 29 GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEID 87 G + ALK + + G S EV E F + + K + Sbjct: 9 GFHVHYALKANFNDRILQLIQAKGFGADCVSGNEVKKSIETGFKADKITFAGVGKSDKEI 68 Query: 88 AVLSNCDTI--IFNTVSQLNKFKDKA--QKLHKKIGLRINPSVSYSKFILADPNRPFSRL 143 + ++ ++ A + LRINP+V ++ Sbjct: 69 RYALAHEIFAFNVESIEEMEVINALAGETGQIANVSLRINPNVDAQTHHYITTGLDENKF 128 Query: 144 GEKCKDK-------IESEIKNVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQI 193 G + ES+ N+ GL FH + F + + F T I Sbjct: 129 GIPNSELEKSAAILRESKHLNLVGLHFHIGSQIVDLNVFKSLCVKVNEWKNWFEERGTTI 188 Query: 194 EWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQ-IYLEPGEAIVTNTTTLNT 246 + +++GGG+ + + F E+ S Q ++ E G A+V +L + Sbjct: 189 KVLNVGGGLGVDYKDPDGNPVTDFEAYFDIFDRFLERNSHQEVHFELGRALVAQCGSLLS 248 Query: 247 TVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT---AMVCGRSCLAGDI 302 VL KN +I+D+ + + L V G C + D Sbjct: 249 RVLYTKSGIKKNFLILDAGMTELMRPALYQAYHKIERVGESDQEEINYDVVGPICESSDC 308 Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 FG+ K GD I+ Y + +N Sbjct: 309 FGKEVPLPVSKRGDLIAIRTAGAYGEVMSSHYNLR 343 >gi|313680960|ref|YP_004058699.1| diaminopimelate decarboxylase [Oceanithermus profundus DSM 14977] gi|313153675|gb|ADR37526.1| diaminopimelate decarboxylase [Oceanithermus profundus DSM 14977] Length = 394 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 127/368 (34%), Gaps = 20/368 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y D +++ L ++ ALK + + L G + SL Sbjct: 20 VPTPFYAYDLRRIEERTRRYLEAF--PTARVFYALKANPRLRLLERLRSQGLGAEAVSLG 77 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 EV+ + F + N K E+ + S T++ ++ + L + + ++ Sbjct: 78 EVVRAYVAGFMPDEVVLNGPVKPPEVLGELARSGVPTLVADSRADLERIAQR--LPEARV 135 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKI------ESEIKNVNGLMFHNNCENKSF 172 LR+NP + R S+ G +D + GL H + Sbjct: 136 LLRLNPDLPVDTHPHLATGRGDSQFGVLPEDWPDVFARGRELGLEMRGLHVHLGSNLHNP 195 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 F+A L+ +++ +E + LGGG +D + + Y ++++E Sbjct: 196 ADFAARLEVLQRLRERVGP-LEVLDLGGGFGLD---LDPRDLAPGMFALARAYGAELWIE 251 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT--A 290 PG A+V + L V + +++D+ + A + L T Sbjct: 252 PGRALVADAGVLVARVWAEKRTRRRYLLLDAGMTAFLRPLLYGARHPVRPLYASERTAVY 311 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350 + G +C +GD+ + GD ++F + Y + P + Sbjct: 312 DLAGPACESGDVLARDVELPVPREGDAVAFLEAGAYGEAMHLDYLDHPRPGAYAWD-GAR 370 Query: 351 IKAIREFS 358 + R Sbjct: 371 WEVWRRPG 378 >gi|282896355|ref|ZP_06304377.1| Diaminopimelate decarboxylase [Raphidiopsis brookii D9] gi|281198851|gb|EFA73730.1| Diaminopimelate decarboxylase [Raphidiopsis brookii D9] Length = 396 Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 54/385 (14%), Positives = 121/385 (31%), Gaps = 23/385 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ D L + K + A + G +++ + Sbjct: 10 GSPLYVYDSDILNQTIAHITKSFKYPETRFYFATVTNGNIALLKVFKNAHWGLHANTPGD 69 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + LG F ++ Y+ + E + T+ ++++Q+ + L G Sbjct: 70 IYLGLSAGFAPDSIIYSGTNLNREEIEQVLSWGVTTLNLDSLAQVQLLCEVCSSLKNTAG 129 Query: 120 ----LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCEN 169 L ++ L SR+G + +D + ++GL F+ Sbjct: 130 KGKNLNTFSRLNQLDIGLRLNVGGESRIGVRLQDFNTAIAIAKNVGLEISGLHFYRGTGT 189 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSE-- 223 + F+ + + + ++I GGG + + + F + + Sbjct: 190 NATKAFTDAIDEVL-VAAQNLPHWKYIDFGGGFGYPYNHQGIAFDWELFGGEIIQRISNL 248 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 ++++ +EPG A + + TL V+ + ++ S ++ + I Sbjct: 249 DRTIKLIIEPGRAAIASCGTLLAKVVSVKWQDNKQILGVDSTVGNIAVPSVYGGYREIIS 308 Query: 283 PNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 +CG + + D G+ +++GD I DV Y + F P Sbjct: 309 WKNHSPKYITDICGNTTYSRDYLGKNCQLPSLEMGDIIGILDVGAYGYAMSSHFLHRPKP 368 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + Y+ N Sbjct: 369 GEVLLENSQHRLIRNREDYSVLLTN 393 >gi|333028651|ref|ZP_08456715.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071] gi|332748503|gb|EGJ78944.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071] Length = 412 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 120/397 (30%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ ++ +AG + A K F + L++ G S E Sbjct: 14 GTPLYVLDEDQVRARARAYRAAFPDAG--VHYAAKAFLCRALVRWLDEEGIGLDVCSAGE 71 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK-LHKKI 118 + L F + + K A ++ ++V ++ + +++ Sbjct: 72 LELAVAAGFPADRVLLHGNAKSPRDLASALRLGVGRVVLDSVGEITRLAALVPPGERRRV 131 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169 +R+ P +S + G D + + + GL H + Sbjct: 132 LVRVVPGISAGHHDKVRTGDEDQKFGLSLTDGSAQHAVARVLATPCLELTGLHCHIGSQI 191 Query: 170 ----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEF 221 +L + + + I LGGG + + D +RL+ Sbjct: 192 AEVKPYLAAQRRLLGLRARIAETYGVVLPEIDLGGGHAVAQRPGERGIDLTDLARRLRAE 251 Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYL 273 + ++ LEPG A+V VL + + + + L Sbjct: 252 LAESCRAAGLPEPRLLLEPGRALVARAGVAVYRVLAVKRTAHRVFVAVDGGMGDNPRPAL 311 Query: 274 LYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 P+ + GR C AGD+ ++ GD ++ Y + Sbjct: 312 YGAPCVPRLVGRVSTAAPHPVDLVGRHCEAGDVLAPAVPLPADIRPGDLVATPVAGAYQL 371 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N P + IR +D + Sbjct: 372 SMASAYNLHGRPPLIATREGTPRLLIRREEPDDLWLR 408 >gi|19115577|ref|NP_594665.1| ornithine decarboxylase Spe1 [Schizosaccharomyces pombe 972h-] gi|13124099|sp|Q9UQW9|DCOR_SCHPO RecName: Full=Ornithine decarboxylase; Short=ODC gi|5262753|emb|CAB45689.1| ornithine decarboxylase [Schizosaccharomyces pombe] gi|6138895|emb|CAB59684.1| ornithine decarboxylase Spe1 [Schizosaccharomyces pombe] Length = 432 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 61/367 (16%), Positives = 117/367 (31%), Gaps = 30/367 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D + L + K V+ A+KC + LN++ G +S E+ Sbjct: 69 FFVADLNGVYRQL--LRWHAKLPRVQPFYAVKCNPDPKVLALLNKFGTGFDCASKGELEQ 126 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K ++ + + +K K + ++ LRI+ Sbjct: 127 ILGLGVSPDRIVYANPCKAITYVRYAASKGINLMTFDNADELYKVKQHHPNSRLLLRIST 186 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ K D +S NV G+ FH + F ++ + Sbjct: 187 DDSNSLCRLSLKFGASLDDTGKLLDIAKSLELNVVGVSFHVGSGSYDPSAFLDAIQRSRQ 246 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIV 238 F + + +GGG + ++ + Y + EPG V Sbjct: 247 VFDQGLERGFNFDLLDIGGGF----MNDSFDGVADLIRSALDTYFDPSIRVISEPGRFFV 302 Query: 239 TNTTTLNTTVLDISENIKNLVIVD-----------SSVEAHVPDY-----LLYQESATIY 282 +++ TL V+ + ++ + H + Sbjct: 303 SSSFTLAVNVIAKRKLDDEEKVMYYVNDGVYGSLNCILFDHQHPVARVLKCGSRFVYNDL 362 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 TG + + G +C + D+ + +GD I FED Y + + FNG Sbjct: 363 VGTGQHRCFIWGPTCDSLDVIANDAHLPYELNVGDWIYFEDAGAYTVAAASCFNGFKTSR 422 Query: 342 IAVKNVD 348 I + D Sbjct: 423 IVYLDTD 429 >gi|292492211|ref|YP_003527650.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus halophilus Nc4] gi|291580806|gb|ADE15263.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus halophilus Nc4] Length = 410 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 50/375 (13%), Positives = 104/375 (27%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y D++ + + G+ L ALK + L +DG +SL E+ Sbjct: 37 TPFYAYDRRLISERIQQLRTHLP-PGIHLHYALKANPMPALVGYLAPLVDGLDVASLGEL 95 Query: 64 MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + ET ++ D E+ A L+ I + ++ + A+K + + Sbjct: 96 RLALDSGMPPETISFAGPGKSDNELAASLAAGIIINMESEGEMERIARLAEKQGHRPKVA 155 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171 + + + K G + I + + G + +N Sbjct: 156 VRVNPNFELKTSGMKMAGGPKPFGIDAERVPPMLTQIGALDFDFYGFHIFSGSQNLRAEA 215 Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--- 227 K + + +++GGG + + Sbjct: 216 IIEAQERTFKLALELARSAPGPVRLLNIGGGFGIPYFPGDKPLDLRPIANNLATSLPEVN 275 Query: 228 ------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272 ++ +E G +V V+D + ++ ++ + H Sbjct: 276 KQLPEAEVIIELGRYLVGEAGIYVCEVIDRKISRGHVFLITNGGLHHHLAASGNFGQVIR 335 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + T V G C D + +GD + Y + Sbjct: 336 KNYPVVVGNRIQGSARETVSVVGPLCTPLDTLADRMELACADVGDLVVVFQSGAYGRSAS 395 Query: 332 N-WFNGINMPTIAVK 345 F P + Sbjct: 396 PLGFLSHPAPAEVLV 410 >gi|262163683|ref|ZP_06031424.1| diaminopimelate decarboxylase [Vibrio mimicus VM223] gi|262027899|gb|EEY46563.1| diaminopimelate decarboxylase [Vibrio mimicus VM223] Length = 343 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 92/331 (27%), Gaps = 24/331 (7%) Query: 52 MDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFK 108 G S+ E+ ++ K A+ + +L++ Sbjct: 2 GSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESERELHRLN 61 Query: 109 DKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVN 159 A +L I LRINP V ++ G E +V+ Sbjct: 62 KVAAELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAEVYRLAHSLSNLDVH 121 Query: 160 GLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ 216 G+ H + + F + I + +GGG+ +D + Sbjct: 122 GIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSE 181 Query: 217 RLKEFSEKYSVQI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPD 271 K ++ EPG AI N L T V + I+D+++ + Sbjct: 182 YAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRP 241 Query: 272 YLLYQE---SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 L T + G C D G+ ++ GD ++ Y Sbjct: 242 ALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LEEGDLLAVRSSGAYGF 300 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + +N + + + + + Sbjct: 301 TMSSNYNSRPRVAEVMVDGNKAHLVRQRETL 331 >gi|302554653|ref|ZP_07306995.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM 40736] gi|302472271|gb|EFL35364.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM 40736] Length = 423 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 60/399 (15%), Positives = 107/399 (26%), Gaps = 38/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D L + + + V + L+LK + L G SSL E Sbjct: 21 GTPLYVYDTDVLRHTYEELR-ALTHPAVDIYLSLKANPNISVCGYLGSLGAGAEVSSLVE 79 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQ---KLHK 116 + E + K I+ ++ +L + + A + Sbjct: 80 LETARRAGVAAEDTIFLGPGKTRAELEACVAAGLRAIVCESLEELAEVDEMAVSAGRADV 139 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNC-- 167 + LR+NP LA + G ++ V G + Sbjct: 140 PVMLRVNPDFHTKGSGLAMG-GKPRQFGIDVALLRNAKRVLKGLRRTRVIGFHAYMGTRF 198 Query: 168 --ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQ 216 +L +++ + GGG + Sbjct: 199 LRHEDLIHNTREILAVASALAAETGIELDIVDFGGGFGIPYFDNEPDLNIPELAAGIDAT 258 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLY 275 + + ++ E G + T T L + E++ + V+ D H+ + Sbjct: 259 VTRFLEDHPDCRLINELGRYLTARCGTYVTRALYVKESMGERFVVADGGTNHHMAAVGVG 318 Query: 276 Q--------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 S T Y V G C D+ G+ V+ GD I E Y Sbjct: 319 SFVKRNFPIRSLTRYHAEPTGAYTVTGPLCTPNDVIGKRVALPEVRPGDLIGVERSGAYG 378 Query: 328 INRKNW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + F P + + R +D Sbjct: 379 PSASPGLFLSHGFPAEVMVHEGTAHLVRRRDVLDDLLGK 417 >gi|190689523|gb|ACE86536.1| ornithine decarboxylase 1 protein [synthetic construct] Length = 461 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 67/392 (17%), Positives = 122/392 (31%), Gaps = 41/392 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQTMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ R ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y++ + G +C D E + +GD + FE++ Y + Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + FNG PTI + +++F D+ Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425 >gi|188990816|ref|YP_001902826.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas campestris pv. campestris str. B100] gi|167732576|emb|CAP50770.1| aspartate kinase / diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris] Length = 896 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 50/365 (13%), Positives = 113/365 (30%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + I + A+K + + L Q G S E Sbjct: 533 GTPRYVYHLPTVRARAQALAQIAAVD--QRYYAIKANSHPAILMALEQAGFGLECVSHGE 590 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + ++ E +A + T+ + V L ++ + + + Sbjct: 591 LRRVFDTLPELSPRRVLFTPSFAPRSEYEAAFALGVTVTVDNVEALKRWPEL--FRGRNV 648 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ + + + G+ H ++ Sbjct: 649 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVELARTLEVTITGVHAHLGSGVETG 708 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + + Sbjct: 709 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLELWAKGLAEVKAVHPGF 767 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L I ++ + V +D+ + + + L + Sbjct: 768 RLAIEPGRYLVAEAGVLLAQATQVIEKDGVHRVGLDAGMNSLIRPALYDAWHDIENLSQL 827 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341 + V G C + D+FG+ G+ + D Y + + +N +P Sbjct: 828 GAPADGSFDVVGPICESSDVFGKRRRLPAATAPGNVMLIADAGAYGYSMASTYNQRELPR 887 Query: 342 IAVKN 346 V + Sbjct: 888 EEVID 892 >gi|21232172|ref|NP_638089.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767699|ref|YP_242461.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas campestris pv. campestris str. 8004] gi|21113926|gb|AAM42013.1| bifunctional diaminopimelate decarboxylase/aspartate kinase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573031|gb|AAY48441.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris str. 8004] Length = 869 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 50/365 (13%), Positives = 113/365 (30%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + I + A+K + + L Q G S E Sbjct: 506 GTPRYVYHLPTVRARAQALAQIAAVD--QRYYAIKANSHPAILMALEQAGFGLECVSHGE 563 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + ++ E +A + T+ + V L ++ + + + Sbjct: 564 LRRVFDTLPELSPRRVLFTPSFAPRSEYEAAFALGVTVTVDNVEALKRWPEL--FRGRNV 621 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ + + + G+ H ++ Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVELARTLEVTITGVHAHLGSGVETG 681 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + + Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLELWAKGLAEVKAVHPGF 740 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L I ++ + V +D+ + + + L + Sbjct: 741 RLAIEPGRYLVAEAGVLLAQATQVIEKDGVHRVGLDAGMNSLIRPALYDAWHDIENLSQL 800 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341 + V G C + D+FG+ G+ + D Y + + +N +P Sbjct: 801 GAPADGSFDVVGPICESSDVFGKRRRLPAATAPGNVMLIADAGAYGYSMASTYNQRELPR 860 Query: 342 IAVKN 346 V + Sbjct: 861 EEVID 865 >gi|154509453|ref|ZP_02045095.1| hypothetical protein ACTODO_01984 [Actinomyces odontolyticus ATCC 17982] gi|153799087|gb|EDN81507.1| hypothetical protein ACTODO_01984 [Actinomyces odontolyticus ATCC 17982] Length = 466 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 51/413 (12%), Positives = 114/413 (27%), Gaps = 51/413 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDG 54 TP +++D + + G A K F + + + G Sbjct: 48 GTPTFVLDVEAMRGRARVWASAMAEEFWDGYGMNGGDAFYAGKAFLSADVARLVAAEGLG 107 Query: 55 TTSSSLYEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA 111 ++SL E+ L + + K A+ + I +++ ++++ + A Sbjct: 108 IDTASLGELSLALRAGVDPDRIGLHGNNKSDAEIRLALEAGIHRIFIDSMDEVHQIERIA 167 Query: 112 QKLHKKIGLRIN--PSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNG 160 L + + + + G E ++ + G Sbjct: 168 ADLGVVAPVMVRLKSGIHAGGNEYIATAHEDQKFGLSLATDQAYEAVAVIKDAAHLDFRG 227 Query: 161 LMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-- 214 L H + ++ + I LGGG+ Sbjct: 228 LHSHIGSQIFGTEAFAEAARIVIDFAALLKAELGLDVPAIDLGGGVGIAYTGQDPVPTSP 287 Query: 215 -------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNL 258 ++E + + +EPG +I + + V + + + Sbjct: 288 VEVARALATVVRERCAHHGLPIPHVSVEPGRSIAGPSMVMLYRVGVVKDISLEDGGVRRY 347 Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPY------TAMVCGRSCLAGDIFGEFHFEK-P 311 V +D + ++ L N P + G+ C +GDI Sbjct: 348 VAIDGGMSDNIRPVLYDAVYTATLANRDPAQASSLARCRIVGKHCESGDIIIRDIDLPAD 407 Query: 312 VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + GD ++ V Y + + +N + P + IR + + Sbjct: 408 ITGGDLLAVPAVGAYGYSMASNYNMLTKPGVLAVEDGSARWFIRPQTVDHLLA 460 >gi|121534334|ref|ZP_01666158.1| Lysine decarboxylase [Thermosinus carboxydivorans Nor1] gi|121307104|gb|EAX48022.1| Lysine decarboxylase [Thermosinus carboxydivorans Nor1] Length = 385 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 101/358 (28%), Gaps = 17/358 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + ++ N + GV + A+K + D L +S E Sbjct: 20 GTPLLVLSRDQIRYNYNFLAEHL--PGVHIYYAMKANPDPRIIDELAGLGACFDVASDGE 77 Query: 63 VM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 ++ L E Y K A F S+ +K + LR Sbjct: 78 ILALAQMGIAPERIVYANPVKTASGLAAARQTGVRKFTFDSESEIYKMAKAVPGGTVLLR 137 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + ++ L + + +V GL FH ++ + L Sbjct: 138 VRVDNPHALVDLNKKFGAHPDEALRLLTIAREQGLDVAGLCFHVGSQSTDAGAYVDALAA 197 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQ--IYLEPG 234 + F + + +GGG +++ +Y I+ EPG Sbjct: 198 CRRIFDAAAKEGFNLRILDIGGGFPIPAIGMKVDAAAMMGQIRTALAQYFPNTEIWAEPG 257 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYT 289 I L T V+ + + + + D+ + + Sbjct: 258 RFICGTAVNLITRVIGVQQRNGQQWYFLDEGLYGTFSGIIFDHW--DFELETFKSEPKIP 315 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 A G SC + D+ P+ + D I Y FNG I V Sbjct: 316 ATFAGPSCDSLDVLFRDKLTPPLAMDDLILVPSCGSYTSASATVFNGFAKAPIIVWEE 373 >gi|73979739|ref|XP_856678.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 8 [Canis familiaris] Length = 448 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 63/366 (17%), Positives = 117/366 (31%), Gaps = 20/366 (5%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K SN + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V++ EPG Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRVIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSS------VEAHVPDYLLYQE--SATIYPNTGP 287 V + TL ++ + + + + + D+ + P+ Sbjct: 278 YYVASAFTLAVNIIAKKLSSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPDEKY 337 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 Y+ + G +C D E + +GD + FE++ Y + + FNG PTI Sbjct: 338 YSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMS 397 Query: 348 DGTIKA 353 T + Sbjct: 398 GPTWQL 403 >gi|301621450|ref|XP_002940066.1| PREDICTED: ornithine decarboxylase-like [Xenopus (Silurana) tropicalis] Length = 417 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 113/364 (31%), Gaps = 26/364 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + VK A+KC + + L G S+ E+ + Sbjct: 30 FYVADLGDIIKKY--WQFSKGLPRVKPFYAMKCNSTRAVLQMLAFLGTGFACCSMAELDM 87 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + K + + K A ++ L+I Sbjct: 88 VLRMGVPAADIVFVNPCKQVSHIRYAAEYGVRKMTFDCESELLKLAASYPQAEMILQIVT 147 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 L+ + E K +S +V G+ FH K F +++ K Sbjct: 148 DNKEPWHTLSGICGVYISECENLLKKAKSLNMDVFGVSFHTGSRCKDTHSFHKAIEDARK 207 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEFSEKYSVQ-----IYLEPGE 235 F + Q+ + +GGG + P + F + ++ ++ I EPG Sbjct: 208 VFDIGKNLGHQMRLLDIGGGFPGDSESRPTFEKFAEVIRISLDQSFPCNEDVQIIAEPGR 267 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA----- 290 VT+ T ++ K + D + + Sbjct: 268 FYVTSAFTAALNIVTKKVVTKKDGEERRQFSYVLNDGIFGSFFLNYMQMEETWPVVGKDF 327 Query: 291 ---------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 ++ G +C + D + +++GD I F ++ Y+++ + FN + P Sbjct: 328 DTAQELFPSILWGPTCASEDKIVKDIDLPELEMGDWIIFPNMGAYSMSMTSNFNAFSTPK 387 Query: 342 IAVK 345 I Sbjct: 388 IYFV 391 >gi|152149219|pdb|2OO0|A Chain A, A Structural Insight Into The Inhibition Of Human And Leishmania Donovani Ornithine Decarboxylases By 3-Aminooxy- 1-Aminopropane gi|152149220|pdb|2OO0|B Chain B, A Structural Insight Into The Inhibition Of Human And Leishmania Donovani Ornithine Decarboxylases By 3-Aminooxy- 1-Aminopropane Length = 471 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 67/392 (17%), Positives = 123/392 (31%), Gaps = 41/392 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 50 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQL 107 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 108 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 167 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ R ++ + +V G+ FH F + + Sbjct: 168 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 227 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 228 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 287 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 288 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 347 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y++ + G +C D E + +GD + FE++ Y + Sbjct: 348 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 403 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + FNG PTI + +++F D+ Sbjct: 404 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 435 >gi|60810097|gb|AAX36104.1| ornithine decarboxylase 1 [synthetic construct] Length = 462 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 67/392 (17%), Positives = 123/392 (31%), Gaps = 41/392 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ R ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y++ + G +C D E + +GD + FE++ Y + Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + FNG PTI + +++F D+ Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425 >gi|118374|sp|P27118|DCOR_CHICK RecName: Full=Ornithine decarboxylase; Short=ODC gi|63713|emb|CAA45965.1| ornithine decarboxylase [Gallus gallus] Length = 450 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 66/392 (16%), Positives = 119/392 (30%), Gaps = 44/392 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + V A+KC + + TL G +S E+ L Sbjct: 30 FYVADLGDIVK--KHMRWHKALPRVTPFYAVKCNDSEAVVKTLAVLGAGFDCASKTEIQL 87 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 88 VQSIGVPPERIIYANPCKQLSQIKHAANSGVRMMTFDSEVELMKIARPHPKAKLLLRITT 147 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + + G+ FH F + + Sbjct: 148 DDSKAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPETFVQAISDARC 207 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V I EPG Sbjct: 208 VFDMGAELGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPLDSEVTIIAEPGR 267 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 268 YYVASAFTLAVNIIAKKIVSKEQTGSDDEDDVNDKTLMYYVNDGVYGSFNCILYDHAHVK 327 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + G Y+ + G +C D E +++GD I FE++ Y + Sbjct: 328 PVLQKRPKPD----DGCYSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENMGAYTVAA 383 Query: 331 KNWFNGINMPTIAVKNVDGTIKA---IREFSY 359 + FNG PTI + I+E + Sbjct: 384 ASTFNGFQRPTIHYVMSRPAWQLMQQIKEQEF 415 >gi|4505489|ref|NP_002530.1| ornithine decarboxylase [Homo sapiens] gi|118377|sp|P11926|DCOR_HUMAN RecName: Full=Ornithine decarboxylase; Short=ODC gi|152149217|pdb|2ON3|A Chain A, A Structural Insight Into The Inhibition Of Human And Leishmania Donovani Ornithine Decarboxylases By 3-Aminooxy- 1-Aminopropane gi|152149218|pdb|2ON3|B Chain B, A Structural Insight Into The Inhibition Of Human And Leishmania Donovani Ornithine Decarboxylases By 3-Aminooxy- 1-Aminopropane gi|35136|emb|CAA39047.1| ornithine decarboxylase [Homo sapiens] gi|189371|gb|AAA59967.1| ornithine decarboxylase [Homo sapiens] gi|296667|emb|CAA34353.1| ornithine decarboxylase (ODC) [Homo sapiens] gi|338278|gb|AAA60563.1| ornithine decarboxylase [Homo sapiens] gi|338280|gb|AAA60564.1| ornithine decarboxylase [Homo sapiens] gi|386989|gb|AAA59969.1| ornithine decarboxylase [Homo sapiens] gi|19263696|gb|AAH25296.1| Ornithine decarboxylase 1 [Homo sapiens] gi|29893806|gb|AAA59966.2| ornithine decarboxylase [Homo sapiens] gi|56410853|gb|AAV88093.1| ornithine decarboxylase 1 [Homo sapiens] gi|62822486|gb|AAY15034.1| unknown [Homo sapiens] gi|119621363|gb|EAX00958.1| ornithine decarboxylase 1, isoform CRA_a [Homo sapiens] gi|119621364|gb|EAX00959.1| ornithine decarboxylase 1, isoform CRA_a [Homo sapiens] gi|123998958|gb|ABM87068.1| ornithine decarboxylase 1 [synthetic construct] gi|157929112|gb|ABW03841.1| ornithine decarboxylase 1 [synthetic construct] gi|158258136|dbj|BAF85041.1| unnamed protein product [Homo sapiens] gi|189053466|dbj|BAG35632.1| unnamed protein product [Homo sapiens] gi|190690881|gb|ACE87215.1| ornithine decarboxylase 1 protein [synthetic construct] Length = 461 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 67/392 (17%), Positives = 123/392 (31%), Gaps = 41/392 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ R ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y++ + G +C D E + +GD + FE++ Y + Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + FNG PTI + +++F D+ Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425 >gi|294626294|ref|ZP_06704897.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599440|gb|EFF43574.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 869 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 112/365 (30%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + I + A+K A + L Q G S E Sbjct: 506 GTPRYAYHLPTVRERAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + ++ E +A + T+ + V L + + + + Sbjct: 564 LRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEV--FRGRNV 621 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ D + + G+ H ++ Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLDLTITGVHAHLGSGVETG 681 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + + Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLEVWAKGLAEVKAVHPGY 740 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L +V I ++ + V +D+ + + L + Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGMNTLIRPALYDAWHDIENLSQL 800 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPT 341 T + G C + D+FG+ + GD + D Y + +N +P Sbjct: 801 DAPADGTFDIVGPICESSDVFGKRRRLPAATVPGDVVLVADAGAYGYTMASTYNQRELPR 860 Query: 342 IAVKN 346 V + Sbjct: 861 EEVID 865 >gi|71278455|ref|YP_269580.1| Orn/DAP/Arg decarboxylase family protein [Colwellia psychrerythraea 34H] gi|71144195|gb|AAZ24668.1| Orn/DAP/Arg decarboxylase, family 2 [Colwellia psychrerythraea 34H] Length = 461 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 62/399 (15%), Positives = 123/399 (30%), Gaps = 38/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P Y++ +Q+L + + VK + ++K + L Q S Sbjct: 49 GSPLYVVSEQRLRQDFKNFKRSFSDEHVKTKVAYSIKTNYLPAVCAILRQEGAQAEVVSG 108 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 E L G+ +N +K + + + + ++L +++L Sbjct: 109 MEYELARTLGIPGKDIIFNGPHKTQSELKLALSEGALVNIDNFNELEHIDRISEELITPA 168 Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 +R+N + + N K ++ G H ++ Sbjct: 169 RVAIRVNFRYGTNPWTKFGFNNENGESLNALKKIARNKKLQFEGFHCHVGTFVLVHELYA 228 Query: 177 AMLKNI---EKEFGHFITQIEWISLGGGIH---FTDKDYPVK------------DFCQRL 218 ++ + K+ I +GGG +Y + + + + Sbjct: 229 NAVEKLIELAKQAREIGLNPTSIDIGGGFPSANTLRPEYDLPGGSQRANNDYLLPYAEHI 288 Query: 219 KEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHVPD 271 K+ + + LEPG AIV +T L +TV+ E + ++ + VP Sbjct: 289 FGQLRKHSELFGNNPTLILEPGRAIVDASTQLLSTVIAKKEIVGGRNAVIIDAGVNLVPT 348 Query: 272 YLLYQESATIYPNTGPY------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 Y T + G C+ D E + +GD +S +V Sbjct: 349 VCYYNHQIKTVAATKSEERGLLKPVDIFGPLCMQSDRLREQILMPALNVGDHLSIGNVGA 408 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + N F P + G R +Y D + Sbjct: 409 YCHTQSNQFI-QPRPATILLGEHGPELIRRAETYKDIFA 446 >gi|209966274|ref|YP_002299189.1| lysine [Rhodospirillum centenum SW] gi|209959740|gb|ACJ00377.1| lysine [Rhodospirillum centenum SW] Length = 376 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 108/358 (30%), Gaps = 29/358 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++D + N D K+ A+K A + L ++S+ E+ Sbjct: 16 TPCLVVDLDVVARNYDRLSGAL--PDAKIYYAVKANPAPEILRLLTGLGSSFDTASVPEI 73 Query: 64 MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + +Y A F++ ++L K A + Sbjct: 74 EDCLAAGATPDRISYGNTIKKAADIRRAYELGVRLFAFDSEAELEKIAANAPGSRVFCRI 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS---A 177 + + P + + G+ FH + + + + Sbjct: 134 LTSGEGADWPLSRKFGCDPEMARDLLLRAAALDVVP--YGVSFHVGSQQRDLAQWDAALS 191 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFC--QRLKEFSEKYSVQIYL 231 I ++ + +++GGG F + L+ + + Sbjct: 192 TTAAIFRDLEEKGVALRMVNMGGGFPTRYRTDVPGTDEYGFAIDEALRRHFGNRIPETIV 251 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYP 283 EPG +V + + + V+ IS N + ++ + + + Y T Sbjct: 252 EPGRGMVGDAGIIQSEVVLISRKSANDLRRWVYLDIGKFGGLAETMDEAIQYP-IETERD 310 Query: 284 NTGPYTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 ++ G +C + D+ E+ ++IGDR++ Y + FNG Sbjct: 311 GGPAEPVILAGPTCDSADVLYERAEYRLPVDLRIGDRVAIRATGAYTTSYSAVNFNGF 368 >gi|301621448|ref|XP_002940065.1| PREDICTED: ornithine decarboxylase-like [Xenopus (Silurana) tropicalis] Length = 430 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 65/376 (17%), Positives = 129/376 (34%), Gaps = 36/376 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D + ++++ VK A+KC + + L G +S+ E+ + Sbjct: 59 FYVADLGDIKQ--KHWRFMKELPRVKPFYAVKCNSTNEVLQMLATLGTGFDCASMGEIDM 116 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K + + FK A ++ LRI Sbjct: 117 VLRMGVPAADIVYANPCKQVSHIKYAAAHGVCKMTFDCEAELFKIAAFHPKAEMILRIAT 176 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + L E+C+D ++ + V G+ FH K+ F +++ Sbjct: 177 DDR---DAWCALSSKYGALVEQCEDLLKTAKNLNIQVIGVSFHTGSGCKNTHSFCKAIED 233 Query: 182 IEKEFG---HFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLE 232 K F Q+ + +GGG ++ ++F +++ +Y I E Sbjct: 234 ARKVFEIGKKLGYQMRLLDIGGGFSGNSEFRPTFEEFADVIRQSLNQYFPNNKEVEIISE 293 Query: 233 PGEAIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 PG V + T+ ++ D + K I++ V D+ L +E + Sbjct: 294 PGRYYVESAFTVALNIITKKEVYEKGADGNSRRKFSYILNDGVYGTFLDFYLVKEKQKLK 353 Query: 283 PNTGP--------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P G + + + G +C D + ++ GD + F ++ Y+I+ F Sbjct: 354 PLLGKDFATEQELFPSNLWGPTCTNVDKLVNEFYLPELETGDWVIFPNMGAYSISMSTTF 413 Query: 335 NGINMPTIAVKNVDGT 350 NG P + G Sbjct: 414 NGFPQPKVYFVLSKGD 429 >gi|254562604|ref|YP_003069699.1| ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens DM4] gi|254269882|emb|CAX25860.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens DM4] Length = 429 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 47/390 (12%), Positives = 98/390 (25%), Gaps = 37/390 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + ++ ++K + +Q G +S E Sbjct: 39 GTPLFVYDADTMRRTYRALCAALAGF-AEVDFSVKANPNPAVIRVFSQEGAGAEIASGAE 97 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 E + K + I ++ + A++ ++ Sbjct: 98 FDAAIRAGVPPEKILFAGPGKGAADLDRVIGGGIGEIHLENREEIVRVAAAAERHGVRVR 157 Query: 120 LRINPSVSYSKFIL-ADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171 + + + + S G +D + + GL + Sbjct: 158 VALRINPGATAQGGAMRMGGKPSPFGFDEEDIEAAIDIVEAAPRLRLVGLHLFAGTQGLK 217 Query: 172 FL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----------KDFCQ 216 +S L + +E I LGGG+ D Sbjct: 218 ADTLLGQWSYGLGLAARIANRIGRPLETIDLGGGLGIPYFSGDTALDLGAIRAGLPDLIA 277 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY---- 272 L+ + S ++ LEPG + VL + E+ + ++ H Sbjct: 278 TLRADPKLASARVVLEPGRYLTGPAGVYVARVLAVKESRGSRFVITDGGMHHHLAASGNL 337 Query: 273 -----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + +A V G C D+ P+ GD ++ Y Sbjct: 338 GQIVKRDFPLAAVTDLGGERAATAVVGPLCTPLDMLARAAPLPPLAEGDLVAVLQSGAYG 397 Query: 328 INRK-NWFNGINMPTIAVKNVDGTIKAIRE 356 + F P + + + Sbjct: 398 LTASPTGFLSHPTPAEVLVDGGEAREIRAR 427 >gi|294666660|ref|ZP_06731897.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603566|gb|EFF46980.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 869 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 112/365 (30%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + I + A+K A + L Q G S E Sbjct: 506 GTPRYTYHLPTVRERAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + ++ E +A + T+ + V L + + + + Sbjct: 564 LRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEV--FRGRNV 621 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ D + + G+ H ++ Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLDLTITGVHAHLGSGVETG 681 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + + Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLEVWAKGLAEVKAVHPGY 740 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L +V I ++ + V +D+ + + L + Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGMNTLIRPALYDAWHDIENLSQL 800 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPT 341 T + G C + D+FG+ + GD + D Y + +N +P Sbjct: 801 DAPADGTFDIVGPICESSDVFGKRRRLPAATVPGDVVLVADAGAYGYTMASTYNQRELPR 860 Query: 342 IAVKN 346 V + Sbjct: 861 EEVID 865 >gi|283850744|ref|ZP_06368031.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio sp. FW1012B] gi|283573987|gb|EFC21960.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio sp. FW1012B] Length = 420 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 53/393 (13%), Positives = 109/393 (27%), Gaps = 32/393 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 T + D +L + +A+K + L G ++SL E Sbjct: 17 DTAVVVYDLDRLEAGVAELAAAF-GPQTLAAVAVKANPLPPVLAFLWGLGAGAEAASLPE 75 Query: 63 VMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI-- 118 + L + + A E+ L+ + + + ++ + A L + Sbjct: 76 LHLALAAGVPAGRIVFDSPAKTADELRLALTLGVWVNADNLEEVARLDTLAASLGRPPEA 135 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFHNNCENKSFL 173 GLR+NP V + +S+ G + + + GL H + Sbjct: 136 GLRVNPQVGLGRIKATSVAGRYSKFGVPLEKRREIKAAFARHPWLTGLHVHVGSQGCPLD 195 Query: 174 CFSA----MLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 A + + ++ + +GGG+ T ++ Sbjct: 196 LLVAGVGAVYDLALEIDREQGPGRVRRLDIGGGLPATYRENDSPPTPAAYAAALATRCPG 255 Query: 229 IY-------LEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL---YQE 277 I+ E G + + V + + V + V + + Sbjct: 256 IFSGDRELVTEFGRWLHAPAAVAISRVEYVKRQRGHRTAVLHLGADMFVRECYNPKSWSH 315 Query: 278 SATIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + G + G C +GD + GD + DV Y ++ Sbjct: 316 RVAVLTADGLEKTGEKSAWHLAGPLCFSGDFPVWRVRLPDIDEGDLLVIRDVGAYTLSMW 375 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N MP + S +D Sbjct: 376 SRYNSRQMPRVLAVRDGRFSVLRERESPDDVVR 408 >gi|240169895|ref|ZP_04748554.1| LysA_1 [Mycobacterium kansasii ATCC 12478] Length = 446 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 53/397 (13%), Positives = 121/397 (30%), Gaps = 37/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ID+ + + + V+++ A K + + G S E Sbjct: 50 GTPAYVIDETDFRHRARRYRAVLR--DVEVVYAGKSLLTTAVARWAREEGLGIGVCSPGE 107 Query: 63 VMLGHEK-FGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + D DAV ++ ++ + A + +++ Sbjct: 108 LAVALAGGVDPSRMVMHGNATSPDELRDAVAVGVGRLVLDSSLGIAYLAGLA-RWRQRVL 166 Query: 120 LRINPSVSYSKFI-----LADPNRPFSRLGEKCKDKIESEIKN----VNGLMFHNNCENK 170 +R+ P V ++DP F+ G D + + + + + GL + Sbjct: 167 IRVTPDVDVHGHRAVTTGISDPTCGFTLTGGHAADAVRAVLAHPILDLIGLHCQLGPQVS 226 Query: 171 SFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222 + ++ + H + +++GGG + + + +++ Sbjct: 227 DPARYGEAIRRLIAAMADIRAHHGVILTELNIGGGHAVPYLRGDPELDLAELAGVIEDAL 286 Query: 223 EKYSVQIYL-------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273 ++ + EPG AI V + +V + L Sbjct: 287 DEACAAEHFPRPAVVVEPGRAISARAGVTLYRVCSVKTRPNGHTVVAVDGGRSDNPRVAL 346 Query: 274 LYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 + N + V GR C AGD + GD ++ Y+ Sbjct: 347 DGAQYTVALANRHGLGVKRSVTVAGRHCGAGDEIARNVELPSDIHAGDLLAVACTGSYHH 406 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + + + P + N + +R + D + Sbjct: 407 SMASNYTMVGRPPLVAVNGGRARELVRRETIADLLSR 443 >gi|84622974|ref|YP_450346.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366914|dbj|BAE68072.1| bifunctional diaminopimelate decarboxylase/aspartase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 869 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 109/365 (29%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + + + A+K A + L Q G S E Sbjct: 506 GTPRYAYHLPTVRARAHALAQVAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 V + + ++ E A + T+ + V L + + + I Sbjct: 564 VRRVFQALPELSPRRVLFTPSFAPKAEYAAAFALGVTVTVDNVEALRNWPEV--FRGRNI 621 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ D + + G+ H ++ Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLEVTITGVHAHLGSGVETG 681 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLDVWAKGLAEVKAVHPGY 740 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L +V I ++ V +D+ + + L + Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVQRVGLDAGMNTLIRPALYDAWHDIENLSQL 800 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK-IGDRISFEDVAGYNINRKNWFNGINMPT 341 T V G C + D+FG+ GD + D Y + + +N +P Sbjct: 801 DAPADSTFDVVGPICESSDVFGKRRRLPAATMPGDVVLVADTGAYGYSMASTYNQRELPR 860 Query: 342 IAVKN 346 V + Sbjct: 861 EEVID 865 >gi|332247288|ref|XP_003272785.1| PREDICTED: ornithine decarboxylase isoform 1 [Nomascus leucogenys] gi|332247290|ref|XP_003272786.1| PREDICTED: ornithine decarboxylase isoform 2 [Nomascus leucogenys] Length = 461 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 67/392 (17%), Positives = 123/392 (31%), Gaps = 41/392 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ R ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y++ + G +C D E + +GD + FE++ Y + Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + FNG PTI + +++F D+ Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425 >gi|21243638|ref|NP_643220.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas axonopodis pv. citri str. 306] gi|21109214|gb|AAM37756.1| bifunctional diaminopimelate decarboxylase/asparta [Xanthomonas axonopodis pv. citri str. 306] Length = 869 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 112/365 (30%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + I + A+K A + L Q G S E Sbjct: 506 GTPRYAYHLPTVRERAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + ++ E +A + T+ + V L + + + + Sbjct: 564 LRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEV--FRGRNV 621 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ + + + G+ H ++ Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVEVARTLEVTITGVHAHLGSGVETG 681 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + + Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLEVWAKGLAEVKAVHPGY 740 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L +V I ++ + V +D+ + + L + Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGMNTLIRPALYDAGHDIENLSQL 800 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341 T + G C + D+FG+ GD + D Y + + +N +P Sbjct: 801 DAPADGTFDIVGPICESSDVFGKRRRLPAATAPGDVVLVADAGAYGYSMASTYNQRELPR 860 Query: 342 IAVKN 346 V + Sbjct: 861 EEVID 865 >gi|300676948|gb|ADK26819.1| ornithine decarboxylase 1 [Zonotrichia albicollis] Length = 460 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 63/392 (16%), Positives = 118/392 (30%), Gaps = 44/392 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDIVK--KHMRWHKALPRVTPFYAVKCNDSKAVVKTLAVLGAGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + S++ K K+ LRI Sbjct: 98 VQSIGVPPERIIYANPCKQVSQIKHAASSGVQMMTFDSEVELMKVARAHPKAKLVLRITT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + + G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F + I EPG Sbjct: 218 VFDMGAELGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGINIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDDTNDKTLMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y+ + G +C D E +++GD I FE++ Y + Sbjct: 338 PVLQKRPKPDDSC----YSCSIWGPTCDGLDRIVERFNMPELQVGDWILFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKA---IREFSY 359 + FNG PTI + I+E + Sbjct: 394 ASTFNGFQRPTIHYVMSRPAWQLMQQIKEQGF 425 >gi|294055339|ref|YP_003548997.1| Diaminopimelate decarboxylase [Coraliomargarita akajimensis DSM 45221] gi|293614672|gb|ADE54827.1| Diaminopimelate decarboxylase [Coraliomargarita akajimensis DSM 45221] Length = 421 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 56/386 (14%), Positives = 121/386 (31%), Gaps = 34/386 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ D L N L G+ A+K + N+ +SS YE Sbjct: 23 GSPVYVYDMATLKANAADVLAFPNAYGLTARYAMKASPNAAILRIFNEAGLHIDASSGYE 82 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V + E + + + + I ++SQL +F + IG+R Sbjct: 83 VRRAIAAGYTPEKISLSTQELPTDFAELYELGIEINACSLSQLERFGQA--FPGRSIGVR 140 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENKSFLCFSA 177 NP + P S G + + ++ + H + + S Sbjct: 141 FNPGAGSGGNNRTNVGGPASSFGIWHEWIDQVQEIVARYDLKVIRIHTHIGSGSDPKVWQ 200 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKY------SV 227 + ++ E + ++LGGG ++ + + + ++ + Sbjct: 201 KISSMSLELVRQFPDVVSLNLGGGYKVARMADEVSTDLQQCGEPVADKFREFAAETGREI 260 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 ++ +EPG ++ N ++ + V D + +++ + + + + Sbjct: 261 RLEIEPGTYLLANACSVLSMVQDKVSTGREGYEFLKLNTGMTEVLRPSIYGAQHPIFILK 320 Query: 285 TGPYT----AMVCGRSCLAGDIFGEFHFEKPV---------KIGDRISFEDVAGYNINRK 331 T M+ G C +GDI + + +IGD + Y Sbjct: 321 EATPTETCDYMIAGHCCESGDILTPASGDPELLATRTLPVTEIGDLCVIDGSGAYCSAMS 380 Query: 332 N-WFNGINMPTIAVKNVDGTIKAIRE 356 +N + + IR+ Sbjct: 381 TKNYNSYPEAAEVMLDEANRPHLIRK 406 >gi|149640409|ref|XP_001508616.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 533 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 113/361 (31%), Gaps = 25/361 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ + D +L+ L GV ++KC + + L G +S E+ Sbjct: 106 PFLVADLGELVRKHQAFLQAL--PGVMPFYSVKCNNSPWVLQILKSLGTGFDCASQAELE 163 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 Y K ++ + S+ K ++ LRI Sbjct: 164 QVLGLGVPATRIIYANPCKQTSHIQYAASQGVQLMTFDSEGELTKVAKFHPGARMVLRIR 223 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + V G+ FH + + + + Sbjct: 224 TEDSKSLHPLSTKFGASLEQSRRLLAVARNLNIAVIGVCFHVGSACQRVQNYEEAIADAH 283 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEPG 234 + F ++ ++ +GGG T+ P + F E +I EPG Sbjct: 284 RVFEMGRQEGHEMHFLDIGGGFPGTESFVPTFEEMAEGIRTALAHYFPEGCGTEIIAEPG 343 Query: 235 EAIVTNTTTLNTTVLDI-----------SENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 T+ ++ N + + D L + Sbjct: 344 RYYATSVYVSALNIIAKKATVEKGGCRKMMYYLNDGCYGLFQMSSMEDPKLKPVVMKTFS 403 Query: 284 NTGP-YTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + P Y ++ G +C A D E +++GD + F+++ Y++ + FNG MP+ Sbjct: 404 SEPPLYPCILWGPTCDAMDKISQEDILLPELEVGDWLVFKNMGSYSLTMFSSFNGFPMPS 463 Query: 342 I 342 + Sbjct: 464 V 464 >gi|300676855|gb|ADK26730.1| ornithine decarboxylase 1 [Zonotrichia albicollis] Length = 460 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 63/392 (16%), Positives = 118/392 (30%), Gaps = 44/392 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDIVK--KHMRWHKALPRVTPFYAVKCNDSKAVVKTLAVLGAGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + S++ K K+ LRI Sbjct: 98 VQSIGVPPERIIYANPCKQVSQIKHAASSGVQMMTFDSEVELMKVARAHPKAKLVLRITT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + + G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F + I EPG Sbjct: 218 VFDMAAELGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGINIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDDANDKTLMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y+ + G +C D E +++GD I FE++ Y + Sbjct: 338 PVLQKRPKPDDSC----YSCSIWGPTCDGLDRIVERFNMPELQVGDWILFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKA---IREFSY 359 + FNG PTI + I+E + Sbjct: 394 ASTFNGFQRPTIHYVMSRPAWQLMQQIKEQGF 425 >gi|297668211|ref|XP_002812342.1| PREDICTED: ornithine decarboxylase-like [Pongo abelii] Length = 461 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 68/393 (17%), Positives = 122/393 (31%), Gaps = 43/393 (10%) Query: 6 YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 +Y+ D L +L + V A+KC + + TL G +S E+ Sbjct: 40 FYVADLGDILKKHLRWLKAV---PRVTPFYAVKCNDSKAIVKTLAAVGTGFDCASKTEIQ 96 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L E Y K +N + S++ K K+ LRI Sbjct: 97 LVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA 156 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S + L+ R ++ + +V G+ FH F + + Sbjct: 157 TDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDAR 216 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234 F + + +GGG ++ + K F V+I EPG Sbjct: 217 CVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGVRIIAEPG 276 Query: 235 EAIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHV 269 V + TL ++ +++ + AHV Sbjct: 277 RYYVASAFTLAVNIIAKKMVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHV 336 Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 L + Y++ + G +C D E + +GD + FE++ Y + Sbjct: 337 KPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVA 392 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + FNG PTI + +++F D+ Sbjct: 393 AASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425 >gi|281348976|gb|EFB24560.1| hypothetical protein PANDA_010453 [Ailuropoda melanoleuca] Length = 427 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 119/386 (30%), Gaps = 41/386 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 6 FYVADLGDILK--KHLRWLKALPRVSPFYAVKCNDSRTIVKTLATIGTGFDCASKTEIQL 63 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 64 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 123 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ +V G+ FH F + + Sbjct: 124 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 183 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F F + + +GGG ++ + K F V+I EPG Sbjct: 184 VFDMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRIIAEPGR 243 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 244 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 303 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y+ + G +C D E + +GD + FE++ Y + Sbjct: 304 PLLQKRPKPD----EKYYSTSIWGPTCDGLDRIVERCDLPEMHVGDWMVFENMGAYTVAA 359 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIRE 356 + FNG PTI T + ++ Sbjct: 360 ASTFNGFQRPTIYYVMSGPTWQLRQQ 385 >gi|268370110|ref|NP_001161238.1| ornithine decarboxylase [Gallus gallus] Length = 464 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 66/392 (16%), Positives = 119/392 (30%), Gaps = 44/392 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + V A+KC + + TL G +S E+ L Sbjct: 44 FYVADLGDIVK--KHMRWHKALPRVTPFYAVKCNDSEAVVKTLAVLGAGFDCASKTEIQL 101 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 102 VQSIGVPPERIIYANPCKQLSQIKHAANSGVRMMTFDSEVELMKIARAHPKAKLVLRITT 161 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + + G+ FH F + + Sbjct: 162 DDSKAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPETFVQAISDARC 221 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V I EPG Sbjct: 222 VFDMGAELGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPLDSEVTIIAEPGR 281 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 282 YYVASAFTLAVNIIAKKIVSKEQTGSDDEDDVNDKTLMYYVNDGVYGSFNCILYDHAHVK 341 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + G Y+ + G +C D E +++GD I FE++ Y + Sbjct: 342 PVLQKRPKPD----DGCYSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENMGAYTVAA 397 Query: 331 KNWFNGINMPTIAVKNVDGTIKA---IREFSY 359 + FNG PTI + I+E + Sbjct: 398 ASTFNGFQRPTIHYVMSRPAWQLMQQIKEQEF 429 >gi|301772282|ref|XP_002921559.1| PREDICTED: ornithine decarboxylase-like [Ailuropoda melanoleuca] Length = 461 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 119/386 (30%), Gaps = 41/386 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVSPFYAVKCNDSRTIVKTLATIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y+ + G +C D E + +GD + FE++ Y + Sbjct: 338 PLLQKRPKPD----EKYYSTSIWGPTCDGLDRIVERCDLPEMHVGDWMVFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIRE 356 + FNG PTI T + ++ Sbjct: 394 ASTFNGFQRPTIYYVMSGPTWQLRQQ 419 >gi|325925946|ref|ZP_08187313.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas perforans 91-118] gi|325543611|gb|EGD15027.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas perforans 91-118] Length = 827 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 110/365 (30%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + I + A+K A + L Q G S E Sbjct: 464 GTPRYAYHLPTVRARAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSQGE 521 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + ++ E +A + T+ + V L + + + I Sbjct: 522 LRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEV--FRGRTI 579 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ D + + G+ H ++ Sbjct: 580 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLEVTITGVHAHLGSGVETG 639 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + + Sbjct: 640 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLEVWAKGLAEVKAVHPGY 698 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L +V I ++ + V +D+ + + L + Sbjct: 699 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGMNTLIRPALYDAWHDIENLSQL 758 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341 + G C + D+FG+ GD + D Y + +N +P Sbjct: 759 DAPADGMFDIVGPICESSDVFGKRRRLPAATAPGDVVLVADAGAYGYTMASTYNQRELPR 818 Query: 342 IAVKN 346 V + Sbjct: 819 EEVID 823 >gi|297282813|ref|XP_001093632.2| PREDICTED: ornithine decarboxylase 2-like [Macaca mulatta] Length = 446 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 104/364 (28%), Gaps = 26/364 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ L D L + V A+KC ++ + L G +S E+ Sbjct: 63 PFMLADLDMLASRHQAFCQAL--PQVSPFYAVKCNSSPWVLRVLAALGTGFDCASQVELE 120 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 Y K + + S+ K ++ LR+ Sbjct: 121 QVLGLGVAPSRIIYANPCKPASHIRYAARHGVQLLTFDSEEELTKVAQHHPGARLLLRLR 180 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S F L+ V G FH ++ F+ + + Sbjct: 181 TQDSQSTFPLSTKFGASLEACGHLLTSARDMGLAVVGASFHVGSNCQTPQSFTQAIADCR 240 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEPG 234 F + + +GGG T+ P + ++F E+ V++ EPG Sbjct: 241 CVFEMGRGAGHDMSCLDIGGGFPGTEDSGPKFEEMARVISAALAQDFPEERGVKVIAEPG 300 Query: 235 EAIVTNTTTLNTTVLDIS-----------ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + + T ++ N S H + Sbjct: 301 RFYMESVCTAAVNIIAKKAVLEPGGSRKLMYYLNDGHYGSFRLGHREPVPRVPIVVKEFC 360 Query: 284 NTGP-YTAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + P + + G +C A D +F E + +GD + F + Y + FNG +P Sbjct: 361 SEPPLFPCTLYGPTCDASDRLFLEDVRLPELDVGDWLVFPSMGAYTSSMSCSFNGF-LPA 419 Query: 342 IAVK 345 Sbjct: 420 TICY 423 >gi|149622083|ref|XP_001513468.1| PREDICTED: similar to ornithine decarboxylase [Ornithorhynchus anatinus] Length = 461 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 67/375 (17%), Positives = 113/375 (30%), Gaps = 35/375 (9%) Query: 6 YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 +Y+ D L +L V A+KC + + TL G +S E+ Sbjct: 40 FYVADLGDVLKKHLRWYK---ALPRVTPFYAVKCNDSKAIVKTLAALGAGFDCASKTEIQ 96 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L E Y K +N + S++ K K+ LRI Sbjct: 97 LVQSIGVSPERIIYANPCKQVSQIKYAANSGVQMMTFDSEVELMKVNRAHPKAKLVLRIA 156 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S + L+ + ++ + +V G+ FH F + + Sbjct: 157 TDDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPDTFVQAVTDAR 216 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234 F + + +GGG ++ + K F V+I EPG Sbjct: 217 CVFDMGAELGFDMYLLDIGGGFPGSEDVKLKFEEITSVINPALEKYFPSDSGVRIIAEPG 276 Query: 235 EAIVTNTTTLNTT-------------------VLDISENIKNLVIVDSSVEAHVPDYLLY 275 V + TL V D + V S + D+ Sbjct: 277 RYYVASAFTLAVNIIAKKVVLKEQTGSDDEDDVNDKTIMYYVNDGVYGSFNCILYDHAHV 336 Query: 276 QESATIYPNTGP--YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + P Y+ + G +C D E +++GD + FE++ Y + + Sbjct: 337 KPILQKRPKPDESYYSCSIWGPTCDGLDRIVERCDMPELQVGDWMLFENMGAYTVAAAST 396 Query: 334 FNGINMPTIAVKNVD 348 FNG PTI Sbjct: 397 FNGFQRPTIYYVMSG 411 >gi|31982947|ref|NP_776555.1| ornithine decarboxylase [Bos taurus] gi|118373|sp|P27117|DCOR_BOVIN RecName: Full=Ornithine decarboxylase; Short=ODC gi|163449|gb|AAA92339.1| ornithine decarboxylase [Bos taurus] gi|1036793|gb|AAA79849.1| ornithine decarboxylase [Bos taurus] gi|148877459|gb|AAI46219.1| Ornithine decarboxylase 1 [Bos taurus] gi|296482246|gb|DAA24361.1| ornithine decarboxylase [Bos taurus] Length = 461 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 66/388 (17%), Positives = 121/388 (31%), Gaps = 33/388 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELDIDVIGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---------------QESAT 280 V + TL ++ +K D E+ ++ Y Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEEESTDRTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 281 IYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P + + G +C D E + +GD + FE++ Y + + F Sbjct: 338 PLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDY 362 NG PTI T + +++ D+ Sbjct: 398 NGFQRPTIYYVMSGPTWQLMQQIRTQDF 425 >gi|170781871|ref|YP_001710203.1| diaminopimelate decarboxylase [Clavibacter michiganensis subsp. sepedonicus] gi|169156439|emb|CAQ01587.1| diaminopimelate decarboxylase [Clavibacter michiganensis subsp. sepedonicus] Length = 499 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 53/432 (12%), Positives = 112/432 (25%), Gaps = 69/432 (15%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK------NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y++D+ + + L ++ A K F + + + + Sbjct: 52 GTPLYVMDEDDVRSRAAETLAAFAREAAAVGTSARVYYAGKAFLSIEVARWMVEEGLHID 111 Query: 57 SSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113 S E+ + ++ K I+ ++ ++ + A Sbjct: 112 VCSGGELAVALAAGADPARLGFHGNNKSVAEIDRAVGAGIGQIVVDSRVEVERIAAAAAA 171 Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFH 164 + + LR+N V R + G +D + GL H Sbjct: 172 HGRVQPVRLRVNSGVHAHTHEYLATAREDQKFGITLQDAPGVVARIRSHASLSFTGLHAH 231 Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFITQ--IEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + F + + + + ++LGGG + Sbjct: 232 IGSQIFETDAFVESARRLLDLHERLLADGPVPELNLGGGFGIAYTSVDRPVPVPEIARRL 291 Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISE------------------ 253 + +EPG +IV +T V + + Sbjct: 292 ARIVGDECGRRGIPAPVIAVEPGRSIVGPSTATLYAVGTVKDVLVTVGGVDGEVAEASSA 351 Query: 254 ---------------NIKNLVIVDSSVEAHVPDYLLYQ----ESATIYPNTGPYTAMVCG 294 ++ V VD + + L A + P + G Sbjct: 352 TGDVEDARVAEEAETAVRRYVSVDGGMSDNARPALYGADYSVRIAGRASDADPALVRIAG 411 Query: 295 RSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 + C +GD + + V+ D ++ Y + +N I P + Sbjct: 412 KHCESGDLVVLADYLPGDVRPHDLLAVPATGAYCWALASNYNWIGRPPVVAVRDGEARVI 471 Query: 354 IREFSYNDYYNN 365 +R + D Sbjct: 472 VRGETEADLLAR 483 >gi|90426308|ref|YP_534678.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB18] gi|90108322|gb|ABD90359.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB18] Length = 380 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 109/358 (30%), Gaps = 29/358 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ A+K A + L +S+ E+ Sbjct: 21 PCLVVDLDVVRDNFQSFAKAL--PDSRVFYAVKANPAPEVLSLLASMGSCFDCASVQEIQ 78 Query: 65 LGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ K A + +++ K A + Sbjct: 79 MALDAGATPDRISFGNTIKKERDIGRAFALGIRLFSVDCTAEVEKIARAAPGAKVFCRIL 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + D + G+ FH + + + L Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVDVLDLAKRLGLEAYGISFHVGSQQRKVKAWDRALAM 196 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232 F + +++GGG + + L++ + +E Sbjct: 197 ASSVFRDCAERGINLSMVNMGGGFPTKYLKEVPAVVQYGRSIFRALRKHFGNAIPETIIE 256 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V N + T V+ IS + ++ + + + Y + Sbjct: 257 PGRGMVGNAGVIETEVVLISTKSDDDDTRWVYLDIGKFGGLAETMDESIRYAIKSRHDGA 316 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 ++ G +C + D+ E + ++IGD++ E Y + FNG Sbjct: 317 EMT-PCVLAGPTCDSADVMYEKLPYPLPVTLEIGDKLLIEGTGAYTSTYSSVAFNGFP 373 >gi|281211064|gb|EFA85230.1| group IV decarboxylase [Polysphondylium pallidum PN500] Length = 436 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 114/369 (30%), Gaps = 34/369 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V A+KC G+ L +S E+ Sbjct: 65 FFVADIGVIIKQWQ--KWVKHLPNVTPFYAVKCNPTMGILKVLEALGTSFDCASRTEIES 122 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 Y K A +N + F+ +S+L K + + + + Sbjct: 123 VLSMGVDPSRIIYANPCKQITAIKYARTNNVKLMTFDNLSELEKIEKFFPEAELVLRIAP 182 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S S +F + + V G+ FH + L+ + Sbjct: 183 DDSKSLMRFGTKFGVHIDDC--SDLLEMAKEMNLKVVGVSFHVGSGCFDASAYDTALEMV 240 Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV---QIYLEPGEA 236 K F ++ + +GGG D F + +++ + + +I EPG Sbjct: 241 RKVFDMAKTHGMELNLVDIGGGF-TGSNDEMFGKFTEVIRKKTAELFDSSVRIIAEPGRY 299 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLY---------------QESAT 280 + TL TV+ + ++ Y Y T Sbjct: 300 FAAMSHTLAVTVISKRSIKQEDNRQHPRRTSNNMRQYNYYLADGVYGSFNNIQFDHAKPT 359 Query: 281 IY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 N P + G +C + D+ + +KIGD + F D+ Y + FNG Sbjct: 360 ALLLKPTNKAPTPCTLFGPTCDSIDVIAKDTQLPELKIGDWLYFPDMGAYTTASASSFNG 419 Query: 337 INMPTIAVK 345 P + Sbjct: 420 FCPPPVYYY 428 >gi|188577968|ref|YP_001914897.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188522420|gb|ACD60365.1| bifunctional diaminopimelate decarboxylase/asparta [Xanthomonas oryzae pv. oryzae PXO99A] Length = 850 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 109/365 (29%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + I + A+K A + L Q G S E Sbjct: 487 GTPRYAYHLPTVRARAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 544 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 V + + ++ E A + T+ + V L + + + I Sbjct: 545 VRRVFQALPELSPRRVLFTPSFAPKAEYAAAFALGVTVTVDNVEALRNWPEV--FRGRNI 602 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ D + + G+ H ++ Sbjct: 603 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLEVTITGVHAHLGSGVETG 662 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + Sbjct: 663 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLDVWAKGLAEVKAVHPGY 721 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L +V I ++ V +D+ + + L + Sbjct: 722 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVQRVGLDAGMNTLIRPALYDAWHDIENLSQL 781 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK-IGDRISFEDVAGYNINRKNWFNGINMPT 341 T V G C + D+FG+ GD + D Y + + +N +P Sbjct: 782 DAPADSTFDVVGPICESSDVFGKRRRLPAATMPGDVVLVADTGAYGYSMASTYNQRELPR 841 Query: 342 IAVKN 346 V + Sbjct: 842 EEVID 846 >gi|58581056|ref|YP_200072.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425650|gb|AAW74687.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 869 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 109/365 (29%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + I + A+K A + L Q G S E Sbjct: 506 GTPRYAYHLPTVRARAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 V + + ++ E A + T+ + V L + + + I Sbjct: 564 VRRVFQALPELSPRRVLFTPSFAPKAEYAAAFALGVTVTVDNVEALRNWPEV--FRGRNI 621 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ D + + G+ H ++ Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLEVTITGVHAHLGSGVETG 681 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLDVWAKGLAEVKAVHPGY 740 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L +V I ++ V +D+ + + L + Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVQRVGLDAGMNTLIRPALYDAWHDIENLSQL 800 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK-IGDRISFEDVAGYNINRKNWFNGINMPT 341 T V G C + D+FG+ GD + D Y + + +N +P Sbjct: 801 DAPADSTFDVVGPICESSDVFGKRRRLPAATMPGDVVLVADTGAYGYSMASTYNQRELPR 860 Query: 342 IAVKN 346 V + Sbjct: 861 EEVID 865 >gi|325916086|ref|ZP_08178375.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas vesicatoria ATCC 35937] gi|325537695|gb|EGD09402.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas vesicatoria ATCC 35937] Length = 869 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 109/365 (29%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + I + A+K A + L Q G S E Sbjct: 506 GTPRYAYHLPTVRARAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + ++ E +A + T+ + V L + + + + Sbjct: 564 LRRVFQTLPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEV--FRGRNV 621 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ + + + G+ H ++ Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVEAARTLEVTITGVHAHLGSGVETG 681 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + + Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLEVWAKGLAEVKAVHPGY 740 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L V I ++ V +D+ + + L + Sbjct: 741 RLAIEPGRYLVAEAGVLLAGVTQVIEKDGVQRVGLDAGMNTLIRPALYDAWHDIENLSRL 800 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + G C + D+FG+ GD + D Y + + +N +P Sbjct: 801 DTAADGAFDIVGPICESSDVFGKRRRLPSSTAPGDVVLVADAGAYGYSMASTYNQRELPR 860 Query: 342 IAVKN 346 V + Sbjct: 861 EEVID 865 >gi|75675117|ref|YP_317538.1| Orn/DAP/Arg decarboxylase 2 [Nitrobacter winogradskyi Nb-255] gi|74419987|gb|ABA04186.1| ornithine decarboxylase [Nitrobacter winogradskyi Nb-255] Length = 380 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 110/358 (30%), Gaps = 29/358 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N ++ A+K A + L ++++ E+ Sbjct: 21 PCLVVDLDIVRDNYQAFAKAL--PDSRVFYAVKANPAPEVLSLLASLGSCFDTATVAEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ + A + +++ K A + Sbjct: 79 MALAAGATPDRISFGNTIKKERDIARAYALGIRLFAVDCHAEVEKIARAAPGAKVFCRIL 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + + D + G+ FH + + + L Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVEVLDLAKRLSLEPIGISFHVGSQQRKVKAWDRALAM 196 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232 + + F + +++GGG + + L++ + +E Sbjct: 197 VSQVFRDCAERGINLTMVNMGGGFPTRYLKDVPPVVQYGRSIFRALRKHFGNQIPETIIE 256 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V N + V+ IS N ++ + + + Y Sbjct: 257 PGRGMVGNAGVIEAEVVLISRKSDNEESRWVYLDIGKFGGLAETMDESIRYAIRTPHDGA 316 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 ++ G +C + D+ E + ++IGD++ E Y + FNG Sbjct: 317 EMT-PCVLAGPTCDSADVLYEKQPYPLPVTLEIGDKLLIEGTGAYTSTYSSVAFNGFP 373 >gi|320006754|gb|ADW01604.1| diaminopimelate decarboxylase [Streptomyces flavogriseus ATCC 33331] Length = 449 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 55/397 (13%), Positives = 125/397 (31%), Gaps = 39/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ID+ + + + L K V + A K F M + S Sbjct: 30 GTPVYVIDESAVRDRCRSYLRAFRSKWPHVDVAYASKAFLVGEMVRLAAEEGLSLDVVSA 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--H 115 E+ L ++ YK E V S +++ + + +++ +A++ Sbjct: 90 GELRLALWAGASPSKITFHGNYKTGEDIELAVCSRVRSLVIDCLDEIDLIDRQAREHGRV 149 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + + +R+N + S+ G + + + + GL FH Sbjct: 150 QDVDIRLNLGIDIHTDPKYTTGDEASKFGLPVRRGDAASAVARVLTRDHLRLRGLHFHLG 209 Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRL 218 + + + + + + I++GGG+ P ++ + L Sbjct: 210 AQVLDTKYHRQALNEVGEFVRTVTARTPWKPQSITVGGGMGVNYDGVSSPPPPSEWARDL 269 Query: 219 KEFSEKYSVQIY-------LEPGEAIVTNTTTLNTTVLDISENIKNL-VIVDSSVEAHVP 270 + +EPG +++ + TV + V VD + + Sbjct: 270 LSVFGEQVAPYCAPDVVFGVEPGRSVIAEAGSTLYTVGPTKRSGDRRLVAVDGGLSDNPR 329 Query: 271 DYLLYQESATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + + + + A + GR C D + + G+ ++ + Sbjct: 330 PLMYQSVHNVVLASNPELRDTELHEATIFGRHCET-DRLIDGVRLPDLPPGEVLAVQCTG 388 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 Y + N N + P + + +R ++D Sbjct: 389 AYTHSMFNQHNRFDKPPVVFVRDGRSRLVVRRERFSD 425 >gi|114576087|ref|XP_001157086.1| PREDICTED: ornithine decarboxylase 1 isoform 6 [Pan troglodytes] Length = 457 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 65/384 (16%), Positives = 118/384 (30%), Gaps = 29/384 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ R ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-----------LYQESATIYPN 284 V + TL ++ +K D + + Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDGIEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQ 337 Query: 285 TGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 P + + G +C D E + +GD + FE++ Y + + FNG Sbjct: 338 KRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQ 397 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 PTI + +++F D+ Sbjct: 398 RPTIYYVMSGPAWQLMQQFQNPDF 421 >gi|325120746|emb|CBZ56301.1| Diaminopimelate decarboxylase protein, related [Neospora caninum Liverpool] Length = 563 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 69/455 (15%), Positives = 119/455 (26%), Gaps = 93/455 (20%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--------------------------KNAGVKL---- 32 +TP+YL D+ ++ N L GV+ Sbjct: 13 QTPFYLYDEARIRENCRRLLAAFSWASEPFSTSQSALENVPRSPREALENRLGVRAASPS 72 Query: 33 -----LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKD-CE 85 A+K + + L + G SSL E++L F GE + E Sbjct: 73 GAFTNYFAVKATPTPAILEILREEGLGADCSSLAELLLAEAAGFRGERIFFTSNDTPLEE 132 Query: 86 IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY------SKFILADPNRP 139 I + S L+ +K I + + Sbjct: 133 FLKARDLGAIINLDDASHLDFLHEKLGGALPSILCFRFNPSAESRQATVQSNPMIMGRPE 192 Query: 140 FSRLGEKCKDKIESEIKNVNG------LMFHNNCENKSFLCFSAMLKNIEKEFGHF---- 189 S+ G + L + S + + Sbjct: 193 ESKFGMTKTQLFRCISRARAWGVCRFALHAMILSNSLSVDEVVETARLLLTVAAEIKERL 252 Query: 190 ITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKY-------SVQIYLEPGEAIV 238 T IE I+LGGG + + + R++ + + +I E G I Sbjct: 253 GTTIEMINLGGGFGVPYRPEEKDLDLHEVSARIRTWYKCTLALQGLAGTRIVTENGRLIT 312 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT--------- 289 + L T V+ + K V VD+ + + + Sbjct: 313 ADAGVLVTRVIHQKKTYKRFVGVDACMAHLMRPGMYGAYHHISVVPDRDRHDPRLPSRRN 372 Query: 290 -------------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 V G C D F V IGD + DV + + Sbjct: 373 LFFSPDDEDEEAGVSDDAIYDVVGGLCENNDKFAVDRPLPRVDIGDLLLIHDVGAHGHSM 432 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 +NG ++ ++G + IR + ND + Sbjct: 433 CFNYNGRLRCAEYLRRLNGEVVMIRRAETLNDLFA 467 >gi|218508585|ref|ZP_03506463.1| diaminopimelate decarboxylase protein [Rhizobium etli Brasil 5] Length = 350 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 95/343 (27%), Gaps = 26/343 (7%) Query: 40 AAWGMFDTLNQYMDGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDC--EIDAVLSNCDTI 96 + + TL + G S E+ ++ K A+ + Sbjct: 8 SNQAVLKTLGRLGAGIDVVSEGELRRALAADISASRIMFSGVGKTPSEMDFALEAGIYCF 67 Query: 97 IFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE 154 + +L +A + RINP V + ++ G + Sbjct: 68 NVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIY 127 Query: 155 IK-------NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHF 204 +V G+ H + F K + I+ + +GGG+ Sbjct: 128 AHAAKLPGIDVTGIDMHIGSQITELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGLGV 187 Query: 205 TDKDYPVKD-----FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNL 258 KD + +K + ++ EPG IV N L T VL + + K Sbjct: 188 PYKDDNNPPPLPDAYAAIVKNQLRDLNCKVITEPGRLIVGNAGILVTEVLYVKDGGEKTF 247 Query: 259 VIVDSSVEAHVPDYLLYQESATI-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 VIVD ++ + L N A V G C GD K Sbjct: 248 VIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAMPK 307 Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 GD ++ Y + +N + + Sbjct: 308 PGDLLAVSTAGAYGAVQAGTYNSRLLVPEVLVKGGDFHAIRPR 350 >gi|126330477|ref|XP_001381464.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 480 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 103/359 (28%), Gaps = 25/359 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + + D L+ V A+KC + + L G +S E+ Sbjct: 75 FMVADLGVLVEQHQIFQQALPR--VTPFYAVKCNNSPSVLQVLANLGTGFDCASQGELEQ 132 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K ++ + + K ++ LR+ Sbjct: 133 VLRMGIAPTRIIYANTCKQISHLQYAASHGVQLMTFDCEEEIAKIAKFYPTARLVLRLWT 192 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S F L+ + V G FH ++ F+ + + Sbjct: 193 QDSESLFPLSAKFGAPLDQCGHLLTLAKDLGVTVVGACFHVGSGCQTPQSFNEAIADARH 252 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEFSEKYSVQ-----IYLEPGE 235 F + + +GGG P ++ + ++Y + I EPG Sbjct: 253 VFDLGLQIGHPMSLLDIGGGFPGKKNFVPTFEEMAAVINRALDQYFPEGSGVKIISEPGR 312 Query: 236 AIVTNTTTLNTTVLDISEN---------IKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 T T ++ + + L + A + + + Sbjct: 313 FYATMVCTAALNIIGKKDLVAEQGGRKLMYYLNDGFYTSFAIIRREKESRTPLVVKKFNC 372 Query: 287 P---YTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 Y +++ G +C A D G + +GD + FED+ Y + FNG + P Sbjct: 373 KPLLYPSILWGPTCDAFDRLGPTDVLLPELHVGDWLIFEDMGAYTYTTSSNFNGFSRPE 431 >gi|224048733|ref|XP_002198114.1| PREDICTED: ornithine decarboxylase 1 [Taeniopygia guttata] Length = 460 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 63/392 (16%), Positives = 118/392 (30%), Gaps = 44/392 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDIVK--KHVRWHKALPRVTPFYAVKCNDSKAVVKTLAVLGAGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + S++ K K+ LRI Sbjct: 98 VQSIGVPPERIIYANPCKQVSQIKHAASSGVQMMTFDSEVELMKVARAHPKAKLVLRITT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + + G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F + I EPG Sbjct: 218 VFDMGAELGFSMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGINIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDDANDKTLMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y+ + G +C D E +++GD I FE++ Y + Sbjct: 338 PVLQKRPKPDDSC----YSCSIWGPTCDGLDRIVERFNMPELQVGDWILFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKA---IREFSY 359 + FNG PTI + I+E + Sbjct: 394 ASTFNGFQRPTIHYVMSRPAWQLMQQIKEQGF 425 >gi|73979731|ref|XP_856512.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 4 [Canis familiaris] Length = 457 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 63/375 (16%), Positives = 112/375 (29%), Gaps = 29/375 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K SN + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V++ EPG Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRVIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-----------LYQESATIYPN 284 V + TL ++ +K D + + + Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDGTYKGFMYYVNDGVYGSFNCILYDHAHVKPLLQ 337 Query: 285 TGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 P + G +C D E + +GD + FE++ Y + + FNG Sbjct: 338 KRPKPDEKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAAASTFNGFQ 397 Query: 339 MPTIAVKNVDGTIKA 353 PTI T + Sbjct: 398 RPTIYYVMSGPTWQL 412 >gi|310923182|ref|NP_001185615.1| ornithine decarboxylase 1 [Macaca mulatta] Length = 461 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 67/392 (17%), Positives = 124/392 (31%), Gaps = 41/392 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAVGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQNLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVTRAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ R ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLRNSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG +++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEEVKLKFEEITNVINPALDKYFPADSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y++ + G +C D E + +GD + FE++ Y + Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + FNG PTI + +++F D+ Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425 >gi|126303210|ref|XP_001371947.1| PREDICTED: similar to ornithine decarboxylase [Monodelphis domestica] Length = 461 Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 66/374 (17%), Positives = 117/374 (31%), Gaps = 33/374 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L + + V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWYKALPRVTPFYAVKCNDSRAILKTLAAVGAGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEISSVINPALDKYFPPDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------DISENIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ D + V S + D+ + Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDEANDQTFMYYVNDGVYGSFNCILFDHAHVK 337 Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P+ Y++ + G +C D E + +GD + FE++ Y + + F Sbjct: 338 PLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNVD 348 NG PTI Sbjct: 398 NGFQRPTIYYVMSG 411 >gi|73979733|ref|XP_856558.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 5 [Canis familiaris] Length = 457 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 63/377 (16%), Positives = 113/377 (29%), Gaps = 33/377 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K SN + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V++ EPG Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRVIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ V S + D+ Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHA--H 335 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + ++ + G +C D E + +GD + FE++ Y + + FNG Sbjct: 336 VKPLLQKVPSEHSISIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAAASTFNG 395 Query: 337 INMPTIAVKNVDGTIKA 353 PTI T + Sbjct: 396 FQRPTIYYVMSGPTWQL 412 >gi|224583151|ref|YP_002636949.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467678|gb|ACN45508.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 465 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 76/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMTYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 ++F + K+ I +EPG + + L T V + Sbjct: 285 QNFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWVKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 K +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461 >gi|83816719|ref|YP_444447.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Salinibacter ruber DSM 13855] gi|83758113|gb|ABC46226.1| diaminopimelate decarboxylase [Salinibacter ruber DSM 13855] Length = 870 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 103/363 (28%), Gaps = 25/363 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 ++P Y+ D + + D + + A+K + L + G S E Sbjct: 508 ESPRYVYDPEVVTARSDEVQGL--GPIDQSFYAVKANPHPEVLRLLERRGLGFECVSPGE 565 Query: 63 VMLGHE---KFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + E + + E + + V L + D +++ Sbjct: 566 LDRVFEACPGLDPARVLFQPNFAAPAEYADAFERGVHVTVDNVQPLAEHPDV--FAGEEL 623 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 +R++P S+ G D ++ V GL H Sbjct: 624 FVRVDPGQGEGHHRKVRTAGAQSKFGVVPDDLGRLRAAVDQAGATVVGLHAHVGSGITDE 683 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT-----DKDYPVKDFCQRLKEFSEKYSV 227 ++ ++ + + +++GGG+ K + Sbjct: 684 STWAGLVDLLA-SLAAEFPAVRALNVGGGLGVPNASGGRPLDLDALDAALGKAAARHPQY 742 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI----Y 282 +++EPG +V L V + D+ + + + L + Sbjct: 743 DLWMEPGRYLVAEAGVLLARVTQTKTKDAAAYVGLDTGMNSLLRPALYGAHHEIVNLSRL 802 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 TA V G C GD+ G P + GD + Y + N +N + Sbjct: 803 DEPPAMTADVVGPVCETGDVLGHDRRLPPTEPGDTLLVATTGAYGASMSNRYNLREPASE 862 Query: 343 AVK 345 + Sbjct: 863 VML 865 >gi|73979737|ref|XP_856636.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 7 [Canis familiaris] Length = 462 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 64/380 (16%), Positives = 113/380 (29%), Gaps = 34/380 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K SN + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V++ EPG Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRVIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ V S + D+ + Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 277 ESATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 P+ + G +C D E + +GD + FE++ Y + + Sbjct: 338 PLLQKVPSEHNEKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAAAST 397 Query: 334 FNGINMPTIAVKNVDGTIKA 353 FNG PTI T + Sbjct: 398 FNGFQRPTIYYVMSGPTWQL 417 >gi|242237573|ref|YP_002985754.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech703] gi|242129630|gb|ACS83932.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech703] Length = 442 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 44/398 (11%), Positives = 107/398 (26%), Gaps = 35/398 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+Y+ ++L + + + +LK + + L G S Sbjct: 28 IGTPFYVYSARQLRRQFGQLRQRLP-SNIDIYYSLKANPNLSVVNLLVTEGAGCEVCSPT 86 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y K I+ ++++L+ +A Sbjct: 87 ELETALAAGVAPQRVLYVGPGKSLAALEHAIDKQVRAIVAESIAELDAINRQAAASGSVQ 146 Query: 119 GLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + + + ++ + + ++ G ++ + + G + Sbjct: 147 TVALRINPDFNVEHARLVMSGKPTQFGLSLENAHAALASLSRWPFIALRGFHIYLGTRIL 206 Query: 171 S----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222 + +L+ + ++++ +GGG + + L + Sbjct: 207 NAQAIADNTRHILQLARALRDRYRLSLDFVDVGGGFGVPYFPKEQPLDLPQLGDALTRIA 266 Query: 223 EKY-----SVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAH-------- 268 + + +I +E G +V T V + K + D H Sbjct: 267 DDFAAQAPDTRIIIELGRYLVAEAGMFVTRVNTLKTAGDKQFAVCDGGANCHSAAAGLNS 326 Query: 269 VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + V G C D+ G+ + +GD I Y + Sbjct: 327 MLRKNFPLRRLGDNRQRPTQRYQVSGPLCTPTDLLGDNVLLPELTVGDLIGITHSGAYGL 386 Query: 329 NRKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 F P + + D + + + Sbjct: 387 TASPGHFLSFGYPAEIMVDGDRVLLIRQPETSRQLLER 424 >gi|325000566|ref|ZP_08121678.1| diaminopimelate decarboxylase [Pseudonocardia sp. P1] Length = 443 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 58/394 (14%), Positives = 120/394 (30%), Gaps = 34/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D + + G +++ A K F G + Q + S E Sbjct: 50 GTPLQVLDSADIRSRCRAYHDAL--PGAEIIYAGKAFLCRGTARLVAQEGCSIDACSGGE 107 Query: 63 VMLGHEKF-GGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 V + GE + + A + I+ ++V ++++ A + +K+ Sbjct: 108 VAVAAAAGVPGERILLHGTVKTDEDLKAAFAARVGRIVIDSVGEIDRIAAAAPR-RQKVL 166 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSF 172 LR+ P + S G + + + GL H + S Sbjct: 167 LRVRPDIDARTHPGLTTATADSWFGIAAGEVLAAVGRILARPQLRLIGLHCHLGSQVCSI 226 Query: 173 LCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEK 224 + M++ + + ++ + LGGG + F + ++ Sbjct: 227 SRYEAAATRMVEVLAAVRARYGLELPQLDLGGGHAVGYAEGERSTDPVSFGRAVRRAVSG 286 Query: 225 YS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQ 276 Q+ +EPG AIV V + + + VD + + L Sbjct: 287 ACTAHGIVEPQLLVEPGRAIVARAGVTLYRVAAVERSGGRSTVLVDGGMSDNPRPALYGA 346 Query: 277 ESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRK 331 V GR C + D+ + + GD ++ Y + Sbjct: 347 RYPVRLVGRATRADLEPMRVAGRHCESTDVLADAVRLPADLTAGDVLAMPVSGAYQASMA 406 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + +N I + + T+ +R + D Sbjct: 407 STYNQIPRVPVVAVSGGATLPLLRRDTPEDLLRR 440 >gi|291232632|ref|XP_002736260.1| PREDICTED: Ornithine DeCarboxylase family member (odc-1)-like [Saccoglossus kowalevskii] Length = 614 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 112/334 (33%), Gaps = 28/334 (8%) Query: 34 LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFGGETHAYNVA-YKDCEIDAVLS 91 A+K + L S E+ L F + +N EI+ ++ Sbjct: 279 YAVKANNNLTILRILRDLGCTAVLVSGNELKLAMLAGFSTDKLVFNGNGKTQWEIELAVT 338 Query: 92 NCDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD 149 + I +++ ++ A++L K+ LR+NP + S+ G D Sbjct: 339 HDVMINADSLFDIDHISSVARQLGKKVKMLLRMNPDIDPEVHRYLATGSAVSKFGIPETD 398 Query: 150 KIESE-------IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLG 199 + ++ GL H + F A + + + H +++++++G Sbjct: 399 LDTALGKAGSDDNIDLVGLHCHIGSTITNIDVFRATVSAMLRYNNHVQGRGFRLKYLNVG 458 Query: 200 GGIHFTDKDY---------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD 250 GG+ + Y + + + ++ + + LEPG +I+ + L + V+ Sbjct: 459 GGLGINYRKYIQGGSPGIPSGGELIDSIADKIKESGLCLILEPGRSIIASAGILVSKVIG 518 Query: 251 ISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGE 305 I N ++D S+ + L +G V G C GD E Sbjct: 519 IKRNETRSFLVIDGSMTEVMRPCLYGAYHHIQLIEPVKTSGTRRYSVVGPVCECGDYLAE 578 Query: 306 FHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 G ++ D Y + + +N Sbjct: 579 DIELPIPHEGCGLAIRDAGAYCASMSSNYNMRVR 612 >gi|237718347|ref|ZP_04548828.1| diaminopimelate decarboxylase [Bacteroides sp. 2_2_4] gi|229452280|gb|EEO58071.1| diaminopimelate decarboxylase [Bacteroides sp. 2_2_4] Length = 365 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 113/344 (32%), Gaps = 26/344 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L + K + A+K A + + + G S Sbjct: 13 LQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDK--AQKLH 115 E+ F + K + FN ++ +L + AQ Sbjct: 73 GEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKV 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168 + RINP V ++ G +D E + GL FH + Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIGSQ 192 Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218 F+ + ++ + +E I++GGG+ + F Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFATYA 252 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277 + + ++ E G A+V +L + VL + + K I+D+ + + L Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQAF 312 Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 I V G C + D+FG+ VK GD I+ Sbjct: 313 HKMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIA 356 >gi|163852839|ref|YP_001640882.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1] gi|163664444|gb|ABY31811.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1] Length = 431 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 45/390 (11%), Positives = 93/390 (23%), Gaps = 37/390 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + ++ ++K + +Q G +S E Sbjct: 41 GTPLFVYDADTMRRTYRALCAALAGF-AEVDFSVKANPNPAVIRVFSQEGAGAEIASGAE 99 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 E + K + I ++ + A++ + Sbjct: 100 FDAAIRAGVPPEKILFAGPGKGAADLDRVIGGGIGEIHLENREEIVRVAAAAERHGVHVR 159 Query: 120 LRINPSVSYSKFIL-ADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171 + + + + S G +D + + GL + Sbjct: 160 VALRVNPGATAQGGAMRMGGKPSPFGFDEEDIEAAIDTVEAEPRLRLIGLHLFAGTQGLK 219 Query: 172 FLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----------KDFCQ 216 + +E I LGGG+ D Sbjct: 220 ADTLLGQWAYGLGLAARIANRIGRPLETIDLGGGLGIPYFSGDTALDLGAIRAGLPDLIA 279 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY---- 272 L+ S ++ LEPG + VL + E+ + ++ H Sbjct: 280 TLRADPRLASARVVLEPGRYLTGPAGVYVARVLAVKESRGSRFVITDGGMHHHLAASGNL 339 Query: 273 -----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + +A V G C D+ P+ GD ++ Y Sbjct: 340 GQIVKRDFPLAAVTDAGGERAATAVVGPLCTPLDMLARAAPLPPLPEGDLVAVLQSGAYG 399 Query: 328 INRK-NWFNGINMPTIAVKNVDGTIKAIRE 356 + F P + + + Sbjct: 400 LTASPTGFLSHPTPAEVLVDGGEAREIRAR 429 >gi|159184868|ref|NP_354660.2| diaminopimelate decarboxylase [Agrobacterium tumefaciens str. C58] gi|159140149|gb|AAK87445.2| diaminopimelate decarboxylase [Agrobacterium tumefaciens str. C58] Length = 393 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 43/387 (11%), Positives = 96/387 (24%), Gaps = 35/387 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +L D + + ++K + + G +S+ E Sbjct: 9 GTPCFLYDNSAMRQAYRDLETALSGF-ADIYYSVKANPLPAIISLFREEGAGAEIASVGE 67 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + K + I + ++ + + + + I Sbjct: 68 YRAAVKAGVAPDNIIFAGPGKSMAELREVIEGGIGEIHIESAEEIARIEAINRPVKASIR 127 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENKSFLCF 175 + P + F E+ ++ ++ ++ G+ + + Sbjct: 128 INPVPDAQAGAMRMGGKATAFGFDEEELENVLKLFANVRHIDLVGIHIYGGTQILDADML 187 Query: 176 SAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKE 220 + ++ G +E I LGGG+ + D LK Sbjct: 188 VSQWRHAIALAGRMAQMLGKPLETIDLGGGLGIPYFAGETSLDLAKVAAAIPDLKALLKA 247 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 + +EPG + V + + +V H Sbjct: 248 HPLIADAHVIVEPGRFLAGPGGLYVVEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIV 307 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + + TA + G C D + GD ++ Y + Sbjct: 308 KRNYPIVAPAMMQAAHDETATIVGPLCTPLDTLARNATLPKLNAGDLLAILQSGAYGASA 367 Query: 331 KN-WFNGINMPTIAVKNVDGTIKAIRE 356 F + + DG + I Sbjct: 368 SPGGFLSHTVAKEVLV-EDGAFEVIGR 393 >gi|317494190|ref|ZP_07952606.1| diaminopimelate decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917963|gb|EFV39306.1| diaminopimelate decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 465 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 76/418 (18%), Positives = 140/418 (33%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ +A K A K + G+ + ++SLY Sbjct: 45 GTPFYVFSEPEIVRNIKEIEQAFSAHANTKTFFASKTCSVMGVLKAIKDAGICAEANSLY 104 Query: 62 EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G +N + A+ + I +++ +L+ + +++L K Sbjct: 105 EVRKCLEIGFSGSQIVFNGVVKKPEDLEYAIDNELYLINVDSLYELDHIDEISRRLKKTA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ ++ + GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILQMPYVKLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY---------------PV 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDEENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ I +EPG + + L T V + Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTDVSCEKRKTNYDLEGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRITEPHDQYIKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 +IGD + F D Y I + +N + + + G + IR +Y D Sbjct: 404 LPHDTQIGDVVVFLDAGAYTIESQTVYNNRPRTAVVMIDNQGKDRLIRREDTYEDMVK 461 >gi|86751645|ref|YP_488141.1| ornithine decarboxylase [Rhodopseudomonas palustris HaA2] gi|86574673|gb|ABD09230.1| ornithine decarboxylase [Rhodopseudomonas palustris HaA2] Length = 380 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 110/356 (30%), Gaps = 25/356 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ A+K A + L +S+ E+ Sbjct: 21 PCLVVDLDVVRDNFASFAKAL--PDSRVFYAVKANPAPEVLSLLASLGSCFDCASVQEIQ 78 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + ++ K A +F+ K K+ RI Sbjct: 79 MALAAGATPDRISFGNTIKKERDIARAFALGIRLFSVDCSAEVEKIARSAPGSKVFCRIL 138 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + +++ L+ + D + G+ FH + + + L Sbjct: 139 YDCAGAEWPLSRKFGCDPEMAVDVLDAAKRLGLEPYGISFHVGSQQRKVKAWDRALAMAA 198 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPG 234 F + +++GGG + + L++ + +EPG Sbjct: 199 TVFRDCAERGINLSMVNMGGGFPTKYLKEVPAVVQYGRSIFRALRKHFGNQIPETIIEPG 258 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTG 286 +V N + T V+ IS+ + ++ + + + Y + Sbjct: 259 RGMVGNAGIIETEVVLISKKSDEDEMRWVYLDIGKFGGLAETMDESIRYAIKSRHDGAEM 318 Query: 287 PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 ++ G +C + D+ E + ++IGD++ E Y FNG Sbjct: 319 A-PCVLAGPTCDSADVMYEKLPYPLPVTLEIGDKLLIEGTGAYTSTYSAVAFNGFP 373 >gi|115526790|ref|YP_783701.1| ornithine decarboxylase [Rhodopseudomonas palustris BisA53] gi|115520737|gb|ABJ08721.1| ornithine decarboxylase [Rhodopseudomonas palustris BisA53] Length = 380 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 110/358 (30%), Gaps = 29/358 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + + +N T ++ A+K A + L +S+ E+ Sbjct: 21 PCLVVDLEVVRDNFQTFATAL--PDSRVFYAVKANPAPEVLTLLASMGSCFDCASVAEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + +Y + A + +++ K A + Sbjct: 79 MALAAGATPDRISYGNTIKKERDIARAFALGIGLYSVDCAAEVEKIARVAPGARVFCRIL 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + D + G+ FH + + + L Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVDVLDLAKRLGLEPYGISFHVGSQQRKVKAWDRALAM 196 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232 F + +++GGG + + L++ + +E Sbjct: 197 ASSVFRDCAERGINLSMVNMGGGFPTKYLKEVPAVVQYGRSIFRALRKHFGNQIPETIIE 256 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V N + T V+ IS + ++ + + + Y + Sbjct: 257 PGRGMVGNAGIIETEVVLISRKSDEDDVRWVYLDIGKFGGLAETMDESIRYAIRSRHDGA 316 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 ++ G +C + D+ E + ++IGD++ E Y + FNG Sbjct: 317 EMT-PCVLAGPTCDSADVMYEKLPYPLPVTLEIGDKLLIEGTGAYTSTYSSVAFNGFP 373 >gi|239906758|ref|YP_002953499.1| decarboxylase [Desulfovibrio magneticus RS-1] gi|239796624|dbj|BAH75613.1| decarboxylase [Desulfovibrio magneticus RS-1] Length = 417 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 59/393 (15%), Positives = 104/393 (26%), Gaps = 32/393 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 T L D L ++ V A+K + L Q G ++SL E Sbjct: 17 DTAVVLYDLDALTARVEALTSAFPAETVH-AFAVKACPLPPVLAMLAQLGLGAEAASLGE 75 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA---QKLHKKI 118 + L F E ++ K E + + + D L + Sbjct: 76 IHLALAAGFPSERIVFDSPAKTVEELRLALSLGLFVNADNLDELDRLDDLGRDMGLVPRA 135 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENKSFL 173 GLRINP + +S+ G + ++GL H + Sbjct: 136 GLRINPQAGTGRIKATSVAGRYSKFGVPLPQREAIVDAFGRYPWLSGLHVHIGSQGCPLE 195 Query: 174 CFSA----MLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRL-------KEF 221 A + F ++ LGGG+ +D Q Sbjct: 196 LLVAGVGAVYDLAADLDARFGPGRVAVFDLGGGLPAAYRDADRPPSPQAYFEALRVRCPG 255 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280 E ++ E G + + V + + ++ + V + + Sbjct: 256 LEGNQRRLVTEFGRMMAAPCAVAASRVEYVKRQPGHRTAVMHLGADMFVRECYNPRFWPH 315 Query: 281 ---------IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + P + G C +GD GD + EDV Y ++ Sbjct: 316 RTRLLGAHGLEKQGKPVLHHLAGPLCFSGDFPVRRAMLPEATAGDIVVIEDVGAYTLSMW 375 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N MP + D Sbjct: 376 SRYNSRQMPRVLGLRQGHFSVLREREEPEDLVQ 408 >gi|326624185|gb|EGE30530.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 460 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 40 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 99 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 100 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 159 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 160 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 219 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 220 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 279 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ I +EPG + + L T V + Sbjct: 280 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 339 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 340 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWVKLAGPLCDGGDYFHMGVKGEEFL 398 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 K +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 399 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 456 >gi|161612905|ref|YP_001586870.1| hypothetical protein SPAB_00611 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|198242305|ref|YP_002216433.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207857778|ref|YP_002244429.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161362269|gb|ABX66037.1| hypothetical protein SPAB_00611 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197936821|gb|ACH74154.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|206709581|emb|CAR33926.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 465 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ I +EPG + + L T V + Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWVKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 K +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461 >gi|85715888|ref|ZP_01046866.1| Orn/DAP/Arg decarboxylase 2 [Nitrobacter sp. Nb-311A] gi|85697295|gb|EAQ35175.1| Orn/DAP/Arg decarboxylase 2 [Nitrobacter sp. Nb-311A] Length = 380 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 113/358 (31%), Gaps = 29/358 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N T ++ A+K A + L ++++ E+ Sbjct: 21 PCLVVDLDIVRDNYQTFAKAL--PDSRVFYAVKANPAPEVLSLLASLGSCFDTATVAEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ + A + +++ K A + Sbjct: 79 MALAAGATPDRISFGNTIKKERDIARAYALGIRLFAVDCNAEVEKIARAAPGAKVFCRIL 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + + D + G+ FH + + + L Sbjct: 139 --YDCAGAEWPLSRKFGCEPEMAVEVLDVAKRLGLEPVGISFHVGSQQRKLKAWDRALAM 196 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232 + + F + +++GGG + + L++ + +E Sbjct: 197 VSQVFRDCGERGINLTMVNMGGGFPTRYLKDVPPVVQYGRSIFRALRKHFGNQIPETIIE 256 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V N + T V+ IS+ + ++ + + + Y Sbjct: 257 PGRGMVGNAGVIETEVVLISKKSDDDENRWVYLDIGKFGGLAETMDESIRYAIRTPHDGA 316 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 ++ G +C + D+ E + ++IGD++ E Y + FNG Sbjct: 317 EMT-PCVLAGPTCDSADVLYEKQPYPLPVTLEIGDKLLIEGTGAYTSTYSSVAFNGFP 373 >gi|325066828|ref|ZP_08125501.1| diaminopimelate decarboxylase [Actinomyces oris K20] Length = 486 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 60/430 (13%), Positives = 126/430 (29%), Gaps = 68/430 (15%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDG 54 +P +++D+ L + AG + A K F + + + G Sbjct: 54 PSPVFVLDEADLRGRAASWAAAMHEEFWPSYGMAGGEAFYAGKAFLTTKVAQWVLEEGMG 113 Query: 55 TTSSSLYEV---MLGHEKFGGETHA--------YNVAYKDCEID-AVLSNCDTIIFNTVS 102 +SS E+ + ++ GE + EI A+ + ++ +++ Sbjct: 114 IDTSSRGELAVSLAALQEVDGEEATTDATRLGLHGNGKTQAEIAVALTHHVGHLVLDSLE 173 Query: 103 QLNKFKDKAQKLHK----------KIGLRINPSVSYSKFILADPNRPFSRLGEK------ 146 +++ ++L K+ +R+ V + G Sbjct: 174 EVDLAVRAVRELRASGVYGPEETGKVMVRLTTGVHAGGHEYISTGHEDQKFGLSVHGGAA 233 Query: 147 ---CKDKIESEIKNVNGLMFHNNCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLG 199 I + ++GL H + F +L K + LG Sbjct: 234 RRAIDAIIAAPELELHGLHSHIGSQILDLAGFREAVGIVLTLRHKVAVDTGHLCPEVDLG 293 Query: 200 GGIHFTDKDYPVKDF---------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTT 247 GG + ++E E+ + +EPG A+ TT T Sbjct: 294 GGYGIAYTGADPVPPSPAQVARTLAEAVRETCERLGDEVPTVSIEPGRAVAGPTTVTLYT 353 Query: 248 VLDISENI------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA------MVCGR 295 V + + V +D + ++ L + N P V G+ Sbjct: 354 VTGLKRVELGEGASRLYVSIDGGMSDNIRPALYEAAYTALVANRRPDPQAGLVRSRVVGK 413 Query: 296 SCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 C +GD+ + +GD ++ Y + + +N P + + + Sbjct: 414 HCESGDVVVRDVDLPADLAVGDVLAVPATGAYGRSMASNYNLFTRPGVRWVREGESDWVL 473 Query: 355 REFSYNDYYN 364 R + D Sbjct: 474 RPETIEDLIR 483 >gi|134058520|emb|CAL00729.1| unnamed protein product [Aspergillus niger] Length = 450 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 114/359 (31%), Gaps = 29/359 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ + + V+ A+KC + + + +G +S E+ Sbjct: 74 PFYVADMGEVYR--QHLRWKMNLSRVRPFYAVKCNPDPEILRLMAKLGNGFDCASKAEID 131 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E Y K + + +K KA ++ LRI Sbjct: 132 MALETGVDPSRIIYAQPCKTKSYLRYAAQVGVKQMTFDNADELYKIKANYPDAELYLRIL 191 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S + + + + V G+ FH + F +++ Sbjct: 192 TDDSNSLCQFSMKFGASLDVARQLLELAHQLELKVVGVSFHVGSGAEDPKAFLKAVQDAR 251 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + + L+ + +++ EPG V N Sbjct: 252 LVFDQAAEIGHELHTLDVGGGFSQDTFEKFAGVLSEALETYFPPN-IRVIAEPGRYYVAN 310 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP------------- 287 TL ++ E + + ++ D + S I+ + P Sbjct: 311 AFTLAANIIARREVRDPEDPANDAYMLYLNDGVYGNFSNIIFDHQHPVAQVLTCASAANS 370 Query: 288 --------YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 T + G +C D+ + +++GD + FE++ Y FNG Sbjct: 371 PYAATSGGVTYSIWGPTCDGIDVISKRIALPALLEVGDWLYFEEMGAYTKCSATRFNGF 429 >gi|291441781|ref|ZP_06581171.1| decarboxylase [Streptomyces ghanaensis ATCC 14672] gi|291344676|gb|EFE71632.1| decarboxylase [Streptomyces ghanaensis ATCC 14672] Length = 542 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 126/400 (31%), Gaps = 39/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P +++ +L N+ + + GV + + K + L++ G S Sbjct: 136 GSPLFVVHGARLAENVRRFQQVPRGRSLGVDVFYSYKTNPVPAVLQRLSRLGVGAEVVSP 195 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKK 117 YE+ L YN K + L D + N ++ A +L K+ Sbjct: 196 YELWLALRLGVEPGRIIYNGPGKTPSVVRTLVRSDLLLTHLNHREEIALVARVAAELGKR 255 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 I + + + S S + ++ + V GL H + Sbjct: 256 IDVGLRVATSDSWSGKFGVPIAGGQALAAYEEALAHPSLRVVGLHAHRGVAIEDADTLER 315 Query: 178 ML----KNIEKEFGHFITQIEWISLGGGIHFTD----------------KDYPVKDFCQR 217 + + + + + LGG + + ++ + Sbjct: 316 FVREVLEFCDALHARLGLDVRLLDLGGSLAVPTVLPLDASPLPLAERVGRRLSIERYLAL 375 Query: 218 LKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP 270 L E E + ++ LEPG A+ NT L V ++ ++ Sbjct: 376 LVEQVEDHFRRVGRPAPRVLLEPGRALTGNTQMLLCRVNSLNAPGSGPAHAILDAGENI- 434 Query: 271 DYLLYQESATIYPNTG-----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 ++L++E I+ T + G +C D + P+++GD ++ D Sbjct: 435 AHILHREYHEIFHAERWGESRSETYTLDGPTCSPMDCLRQTVALPPLRVGDTLAIMDAGA 494 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y ++ N F P + V + R +Y D Sbjct: 495 YLVSFSNSF-CFPQPGVVVLDQGRERLIRRPETYEDMIAR 533 >gi|239933414|ref|ZP_04690367.1| decarboxylase, pyridoxal-dependent [Streptomyces ghanaensis ATCC 14672] Length = 554 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 126/400 (31%), Gaps = 39/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P +++ +L N+ + + GV + + K + L++ G S Sbjct: 148 GSPLFVVHGARLAENVRRFQQVPRGRSLGVDVFYSYKTNPVPAVLQRLSRLGVGAEVVSP 207 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKK 117 YE+ L YN K + L D + N ++ A +L K+ Sbjct: 208 YELWLALRLGVEPGRIIYNGPGKTPSVVRTLVRSDLLLTHLNHREEIALVARVAAELGKR 267 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 I + + + S S + ++ + V GL H + Sbjct: 268 IDVGLRVATSDSWSGKFGVPIAGGQALAAYEEALAHPSLRVVGLHAHRGVAIEDADTLER 327 Query: 178 ML----KNIEKEFGHFITQIEWISLGGGIHFTD----------------KDYPVKDFCQR 217 + + + + + LGG + + ++ + Sbjct: 328 FVREVLEFCDALHARLGLDVRLLDLGGSLAVPTVLPLDASPLPLAERVGRRLSIERYLAL 387 Query: 218 LKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP 270 L E E + ++ LEPG A+ NT L V ++ ++ Sbjct: 388 LVEQVEDHFRRVGRPAPRVLLEPGRALTGNTQMLLCRVNSLNAPGSGPAHAILDAGENI- 446 Query: 271 DYLLYQESATIYPNTG-----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 ++L++E I+ T + G +C D + P+++GD ++ D Sbjct: 447 AHILHREYHEIFHAERWGESRSETYTLDGPTCSPMDCLRQTVALPPLRVGDTLAIMDAGA 506 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y ++ N F P + V + R +Y D Sbjct: 507 YLVSFSNSF-CFPQPGVVVLDQGRERLIRRPETYEDMIAR 545 >gi|167534885|ref|XP_001749117.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772270|gb|EDQ85923.1| predicted protein [Monosiga brevicollis MX1] Length = 570 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 50/378 (13%), Positives = 104/378 (27%), Gaps = 44/378 (11%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 +L+D +++ + V+ A+KC + L+ +S E+ Sbjct: 106 FLLDLAQVVRQQRRFER--QLPNVQPFYAVKCNPDPHILRALDALGVNFDCASKGEMAQV 163 Query: 67 HE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E + K A + F+ +L+K ++ LR+ Sbjct: 164 LDMGVAPERIIFANPCKPISHLRAARRWGVQLMTFDNEDELDKIH--VHYPEAQLVLRVL 221 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S + L + + + N+ G+ FH F+ + Sbjct: 222 ADDSSAVCRLGLKFGAPLSVVPRLLRRALELDLNLVGVSFHVGSGCTDANAFADAVHRAR 281 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPV----------KDFCQRLKEFSEKYSVQIY 230 + F ++ + +GGG D+ Q L+ Sbjct: 282 QVFDMATELGVCLKILDVGGGFPGADETSTNSKDVTFADIAHHLRQALQRHFGHLPDLTI 341 Query: 231 L-EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA---------------------- 267 + EPG + TL V+ D Sbjct: 342 MAEPGRFYAHSAVTLAVNVIARRGASGRPGEEDHVRYYVSDGVYGSFNCLLFDHASVRGL 401 Query: 268 -HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + + + + + V G +C + D +++GD + + D+ Y Sbjct: 402 PLLRAADADHDPNHVDHDLKLHASSVWGPTCDSLDCIAREAQLPLLEVGDWLVYHDMGAY 461 Query: 327 NINRKNWFNGINMPTIAV 344 + FNG P Sbjct: 462 TACAASTFNGFVRPRCYY 479 >gi|294506193|ref|YP_003570251.1| Aspartate kinase [Salinibacter ruber M8] gi|294342521|emb|CBH23299.1| Aspartate kinase [Salinibacter ruber M8] Length = 870 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 103/363 (28%), Gaps = 25/363 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 ++P Y+ D + + D + + A+K + L + G S E Sbjct: 508 ESPRYVYDPEVVTARSDEVQGL--GPIDQSFYAVKANPHPEVLRLLERRGLGFECVSPGE 565 Query: 63 VMLGHE---KFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + E + + E + + V L + D +++ Sbjct: 566 LDRVFEACPGLDPARVLFQPNFAAPAEYADAFERGVHVTVDNVQPLAEHPDV--FAGEEL 623 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 +R++P S+ G D ++ V GL H Sbjct: 624 FVRVDPGQGEGHHRKVRTAGAQSKFGVVPDDLGRLRAAVDQAGATVVGLHAHVGSGITDE 683 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT-----DKDYPVKDFCQRLKEFSEKYSV 227 ++ ++ + + +++GGG+ + + Sbjct: 684 STWAGLVDLLA-SLAAEFPAVRALNVGGGLGVPNASGGRPLDLDALDAALGEAAARHPQY 742 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI----Y 282 +++EPG +V L V + D+ + + + L + Sbjct: 743 DLWMEPGRYLVAEAGVLLARVTQTKTKDAAAYVGLDTGMNSLLRPALYGAHHEIVNLSRL 802 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 TA V G C GD+ G P + GD + Y + N +N + Sbjct: 803 DEPPAMTADVVGPVCETGDVLGHDRRLPPTEPGDTLLVATTGAYGASMSNRYNLREPASE 862 Query: 343 AVK 345 + Sbjct: 863 VML 865 >gi|209884063|ref|YP_002287920.1| ornithine decarboxylase [Oligotropha carboxidovorans OM5] gi|209872259|gb|ACI92055.1| ornithine decarboxylase [Oligotropha carboxidovorans OM5] Length = 411 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 114/362 (31%), Gaps = 30/362 (8%) Query: 2 IKT-PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + T P ++D + +N T ++ A+K A + L ++++ Sbjct: 48 LDTEPCLVVDLDVVRDNYQTFAKAL--PDSRVFYAVKANPAPEVLTLLASLGSCFDTATV 105 Query: 61 YEVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + + ++ + A + +++ K A Sbjct: 106 PEIEMALAAGATPDRISFGNTIKKERDVARAYALGIRLFAVDCTAEVEKIARAAPGAKVF 165 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + +++ L+ + D + G+ FH + + + Sbjct: 166 CRIL--YDCAGAEWPLSRKFGCDPEMAVDVLDLAKRLGLEPVGISFHVGSQQRKVKAWDR 223 Query: 178 MLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQ 228 L + F + +++GGG + + L++ + Sbjct: 224 ALAMASQVFRDCAERGINLTMVNMGGGFPTKYLKDVPPVVQYGRSIFRALRKHFGNQIPE 283 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESAT 280 +EPG +V N + V+ IS+ + ++ + + + YQ Sbjct: 284 TIIEPGRGMVGNAGVIEAEVVLISKKSDDDENRWVYLDIGKFGGLAETMGESIRYQIRTR 343 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 ++ G +C + D+ E + ++IGD++ E Y + FNG Sbjct: 344 HDGAEMA-PCVLAGPTCDSADVLYEKAPYPLPVTLEIGDKVLIEGTGAYTSTYSSVAFNG 402 Query: 337 IN 338 I Sbjct: 403 IP 404 >gi|297156524|gb|ADI06236.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces bingchenggensis BCW-1] Length = 423 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 47/397 (11%), Positives = 102/397 (25%), Gaps = 35/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + L + + +++ +LK + L + SSL E Sbjct: 20 GTPLYVYDGELLAGAVRSLAEALPRP-MEIFYSLKANPNSSVCSLLFAHGAHAEVSSLVE 78 Query: 63 VMLGH-EKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119 + E + +I A + I+ + +L + A++ + Sbjct: 79 LRTARTAGARPENIIFLGPGKNAEDIRACVQGRVYAIVCESWEELELIEATARQAGLRQR 138 Query: 120 LRINPSVSYSK-------FILADPNRPFSRLGEKCKDKIESEIKNVN-GLMFHNNCENKS 171 + + + S+ K+++ + V G+ + Sbjct: 139 VLLRINPSFGGAGSRLAMGGKPRQFGIDEEQVLAGKERLSALTHAVPLGVHVYLGTRILD 198 Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS----- 222 + +L E+ ++E + +GGG+ + L+ Sbjct: 199 AAAIVENTAQVLALAERVAAATGIELEAVDVGGGLGVAYFENEQDLDLDALRTGLTPVVG 258 Query: 223 ----EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 ++ LE G + V + E+ V H + Sbjct: 259 DFARRHPRTRLLLESGRFLTARAGAYLVRVQYVKESRDTWFAVTDGGTHHHMAAVGVGSY 318 Query: 279 ATIYPNTG---------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 A V G C D + GD ++ Y Sbjct: 319 ARRNFPVAAVAGDGAGPERRWHVTGPLCTPEDTLARGVPLPGIAPGDVLAVLRSGAYGPT 378 Query: 330 RKNW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 F P + + + + +D Sbjct: 379 ASPGLFLSHGFPAEVLVHEGRPLLVRDRDTADDLLRK 415 >gi|154249371|ref|YP_001410196.1| Orn/DAP/Arg decarboxylase 2 [Fervidobacterium nodosum Rt17-B1] gi|154153307|gb|ABS60539.1| Orn/DAP/Arg decarboxylase 2 [Fervidobacterium nodosum Rt17-B1] Length = 393 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 117/368 (31%), Gaps = 18/368 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D + NN + K+ A+K + + L +S E Sbjct: 12 GTPVLVMDLNVIANNYRQLIE--NINNCKVYYAVKSNSHIEIVKFLKDMGSHFDVASRGE 69 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ++ + A + ++ K A + Sbjct: 70 IEKLLSIGVEPSRMSFGNTIKKIEDIKFAYEVGIRMFAVDAEMEIEKIALVAPNADIYVR 129 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + N + + L + + + N GL FH +N + + + Sbjct: 130 ISTNGMEGDADWPLTRKFGTSVNHAIELVRYAKEKGLNPIGLSFHVGSQNYNPENWRTAI 189 Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKY---SVQIYL 231 + F F +++ I+ GGG+ +K + + E E+Y + + + Sbjct: 190 REASIVFEEAKQFGVEMKMINTGGGMPVRYVRDIPSIKKIAKVINEAVEEYLGNDITVIV 249 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATIYPNTGP-- 287 EPG ++V N + + V+ S+ + + H + T+ Sbjct: 250 EPGRSMVGNAGVMISRVILRSKKGDENWLYLDAGVFHGLTETIQNIRYRITVDGKEDEEL 309 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ G +C + D+ +GD + F Y FNGI P+I +N Sbjct: 310 EKFVLAGPTCDSVDVMYYDAMLPKSTTLGDIVYFFATGAYTTEYGTNFNGIASPSIIFEN 369 Query: 347 VDGTIKAI 354 + + + Sbjct: 370 GILSEEIV 377 >gi|154150589|ref|YP_001404207.1| Orn/DAP/Arg decarboxylase 2 [Candidatus Methanoregula boonei 6A8] gi|153999141|gb|ABS55564.1| Orn/DAP/Arg decarboxylase 2 [Methanoregula boonei 6A8] Length = 397 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 65/366 (17%), Positives = 114/366 (31%), Gaps = 29/366 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID K+ N ++ A+K + G+ TL +S+ E Sbjct: 33 GTPLFVIDHAKIRENYREFKKNF--PKIQAYFAVKANSNPGIVKTLMDLGASFDVASMPE 90 Query: 63 VMLG-----------HEKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDK 110 M+ + F + Y K E + + + F+ + +L K + Sbjct: 91 FMIVHNFIKDMPDKERQDFIWDRIIYANTIKPIETLEELNQYKPLVTFDNIEELKKIRQH 150 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 A + + LR+ + S + P V GL FH + Sbjct: 151 APQAGLVLRLRVPNTGSMVELSSKFGADPGEA--VDLIKAAFDLGLVVEGLSFHVGSQCT 208 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE--- 223 +F + L+ +I + +GGG +K +E Sbjct: 209 NFENYVVALQISANIIEETEHRTGRKIRILDIGGGFPVKYNPEVRSIEELAVKLKAEIAR 268 Query: 224 --KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--DYLLYQESA 279 ++I EPG +V N TL V+ + + H + Sbjct: 269 LFPDDMEILAEPGRFLVANACTLVAKVVGKAYRDGKPCYYINDGVYHTYSGQVFDHCTYP 328 Query: 280 TIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + GP V G +C A D + IGD + ++ Y+I +FNG Sbjct: 329 VLAFKEGPRQISAVFGPTCDAFDTITLSAELPELDIGDLVYSVNIGAYSIASSTYFNGFP 388 Query: 339 MPTIAV 344 P Sbjct: 389 -PAKVF 393 >gi|78048612|ref|YP_364787.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037042|emb|CAJ24777.1| bifunctional diaminopimelatedecarboxylase/aspartate kinase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 869 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 110/365 (30%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + I + A+K A + L Q G S E Sbjct: 506 GTPRYAYHLPTVRARAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + ++ E +A + T+ + V L + + + I Sbjct: 564 LRRVFQTLPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEV--FRGRTI 621 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ D + + G+ H ++ Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLEVTITGVHAHLGSGVETG 681 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + + Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLEVWAKGLAEVKAVHPGY 740 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L +V I ++ + V +D+ + + L + Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGMNTLIRPALYDAWHDIENLSQL 800 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341 + G C + D+FG+ GD + D Y + +N +P Sbjct: 801 DAPAGGMFDIVGPICESSDVFGKRRRLPAATAPGDVVLVADAGAYGYTMASTYNQRELPR 860 Query: 342 IAVKN 346 V + Sbjct: 861 EEVID 865 >gi|330803450|ref|XP_003289719.1| hypothetical protein DICPUDRAFT_98470 [Dictyostelium purpureum] gi|325080187|gb|EGC33753.1| hypothetical protein DICPUDRAFT_98470 [Dictyostelium purpureum] Length = 453 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 109/370 (29%), Gaps = 32/370 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + + V A+KC G+ L+ +S E+ Sbjct: 79 FFVADIAVIIRQY--LKWKKNLPNVTPFYAVKCNPTIGILKVLDALGTSYDCASRTEIET 136 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 Y K A N + F+ VS+L K + + + + Sbjct: 137 VLNLGVDPTRIIYANPCKQISAIKFARAHNVKLMTFDNVSELEKIEKFFPEAELVLRIAP 196 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAML 179 + S S +F + + V G+ FH + M+ Sbjct: 197 DDSKSLMRFGTKFGVHIDDCY--DLLEMAKEMNLKVVGVSFHVGSGCFDSIAYDSALKMV 254 Query: 180 KNIEKEFGHFITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 K++ + + + +GGG + + +V+I EPG Sbjct: 255 KSVFEMAKKLDMTLTLVDVGGGFSGSNDEMFEKFTTVIREKTAELFDSNVRIIAEPGRYF 314 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLY---------------QESATI 281 + TL TV+ + ++ Y Y T Sbjct: 315 AAQSHTLAVTVISKRIIKQEDNRQHPRRTSNNMRQYNYYLADGVYGSFNNIQFDHAKPTP 374 Query: 282 Y----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 N P + G +C + D+ +KIGD + F D+ Y + FNG Sbjct: 375 MLLKPSNKQPTPCTLFGPTCDSIDVIARDTQIPELKIGDWLYFPDMGAYTTASASSFNGF 434 Query: 338 NMPTIAVKNV 347 P + N Sbjct: 435 CPPPVYYYNS 444 >gi|318060098|ref|ZP_07978821.1| putative diaminopimelate decarboxylase [Streptomyces sp. SA3_actG] gi|318076257|ref|ZP_07983589.1| putative diaminopimelate decarboxylase [Streptomyces sp. SA3_actF] Length = 439 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 119/397 (29%), Gaps = 36/397 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ ++ +AG + A K F + L++ G S E Sbjct: 41 GTPLYVLDEDQVRARARAYRAAFPDAG--VHYAAKAFLCRALVRWLDEEDIGLDVCSAGE 98 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK-LHKKI 118 + L F + + K A ++ + V ++ + +++ Sbjct: 99 LELAVAAGFPADRVLLHGNAKSPRDLASALRLGVGRVVLDGVGEITRLAALVPPGERQRV 158 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169 +R+ P +S + G D + + + GL H + Sbjct: 159 LVRVVPGISAGHHDKVRTGDEDQKFGLSLTDGSAQHAVARVLATPRLELTGLHCHIGSQI 218 Query: 170 ----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEF 221 +L + + + I LGGG + + D +RL+ Sbjct: 219 AEVKPYLAAQRRLLGLRARIAETYGVVLPEIDLGGGHAVAQRPGERGIDLTDLARRLRAE 278 Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYL 273 + ++ LEPG A+V VL + + + + L Sbjct: 279 LAESCRAAGLPEPRLLLEPGRALVARAGVAVYRVLAVKRTAHRVFVAVDGGMGDNPRPAL 338 Query: 274 LYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 P+ + GR C AGD+ ++ GD ++ Y + Sbjct: 339 YGAPCVPRLVGRVSTAAPHRVDLVGRHCEAGDVLAPAVPLPADIRPGDLVATPVAGAYQL 398 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + + +N P + IR +D + Sbjct: 399 SMASAYNLHGRPPLIATREGTPRLLIRREEPDDLWLR 435 >gi|157117130|ref|XP_001652949.1| ornithine decarboxylase [Aedes aegypti] gi|108876150|gb|EAT40375.1| ornithine decarboxylase [Aedes aegypti] Length = 433 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 65/370 (17%), Positives = 116/370 (31%), Gaps = 24/370 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++ + K V A+KC + TL +S E+ Sbjct: 37 PFYVMDIDDIVRKHQAWIE--KMPRVVPHYAVKCNDTEVVCATLATLGASFDCASKGEIA 94 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K +N T+ F++ +L+K + + +R Sbjct: 95 KILALGVSPDRIIFANPMKPSSHLRYASANNVKTMTFDSEIELHKIRKFCPDAKLVLRIR 154 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + P + S +V G+ FH F + + Sbjct: 155 CEAEKATCPLGKKFGCDPVDEAPSLIR-IARSMNLDVIGISFHVGSGCSDFPIYYKAISI 213 Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 F + + +GGG + D L +F SV+I EPG Sbjct: 214 ARDLFDYAKQLGYEFNLLDIGGGFPGSHGTSIDEVALIINTALDKFFADKSVRIISEPGR 273 Query: 236 AIVTNTTTLNTTVLDIS------------ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 V + TL T V V +S + D+ Q Sbjct: 274 YYVASAFTLLTNVQSKRACLDPATGTIDRMMYYLNDGVYASFNCILFDHQYPQPRLIGQQ 333 Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + Y + + G SC A D E ++I D + F+++ Y I + FNG +P + Sbjct: 334 SGKTYKSTIWGPSCDALDQVVETINLPELQIEDWVVFDNMGAYTIPIASPFNGFPLPKVF 393 Query: 344 VKNVDGTIKA 353 T++ Sbjct: 394 CYISKNTLEM 403 >gi|167549634|ref|ZP_02343393.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325203|gb|EDZ13042.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 465 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 76/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ I +EPG + + + T V + Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVILTEVSCEKRKTNYDLNGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTVAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 K +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461 >gi|73979725|ref|XP_848547.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 2 [Canis familiaris] gi|73979741|ref|XP_856711.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 9 [Canis familiaris] Length = 461 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 65/383 (16%), Positives = 116/383 (30%), Gaps = 41/383 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K SN + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V++ EPG Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRVIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y+ + G +C D E + +GD + FE++ Y + Sbjct: 338 PLLQKRPKPD----EKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKA 353 + FNG PTI T + Sbjct: 394 ASTFNGFQRPTIYYVMSGPTWQL 416 >gi|168229736|ref|ZP_02654794.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470577|ref|ZP_03076561.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194456941|gb|EDX45780.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335840|gb|EDZ22604.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 465 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ I +EPG + + L T V + Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDTWIKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 K +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461 >gi|161502495|ref|YP_001569607.1| hypothetical protein SARI_00539 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863842|gb|ABX20465.1| hypothetical protein SARI_00539 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 465 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ I +EPG + + L T V + Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRITAAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 K +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461 >gi|238064589|ref|ZP_04609298.1| orn/DAP/Arg decarboxylase 2 [Micromonospora sp. ATCC 39149] gi|237886400|gb|EEP75228.1| orn/DAP/Arg decarboxylase 2 [Micromonospora sp. ATCC 39149] Length = 417 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 53/397 (13%), Positives = 107/397 (26%), Gaps = 35/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D L + V +L +LK + L G SSL E Sbjct: 6 GTPLFVYDADVLRERYRQLREVLH-PEVGILFSLKANPNVSICAVLRSLGAGAEVSSLAE 64 Query: 63 VMLG-HEKFGGET-HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119 +++ E EIDA L+ I+ + S+L + A + + Sbjct: 65 LLIAGRAGVAPEDTIFLGPGKSIQEIDACLATGVHAIVCESWSELTEIDALAARRNIVAR 124 Query: 120 LRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK- 170 + + + S K + + G + +E+ + G+ + Sbjct: 125 VVLRINPSFTVKGSRLTMSGKPRQFGIDEEQALEAAARVAGLGNVRLTGVHVYMGTRILA 184 Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS- 222 + +L E+ ++E + +GGG+ +D ++ + Sbjct: 185 EEVVAENTTRILDLAERVAERLDFELETVDVGGGLGVAYFDGERDLNLRRLADLVNPAFA 244 Query: 223 ----EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 +++ E G + + T V + E++ V H + Sbjct: 245 AFRARHPRTRLFTELGRFLTAESGTYLVRVRQVKESMGERFAVTDGGTHHHMAAVGIGSF 304 Query: 279 ATIYPN---------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 V G C D ++ GD + Y Sbjct: 305 VKRDFPIRLLGREATEPAQNWRVTGLLCTPNDTLSTHTPLPSLRPGDLLGVLRSGAYGPT 364 Query: 330 RKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 F P + + D + Sbjct: 365 ASPVLFLSHGHPAEVLVDAGRPYLIRDRDRPADIVDR 401 >gi|194220974|ref|XP_001502373.2| PREDICTED: similar to Ornithine decarboxylase (ODC) [Equus caballus] Length = 461 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 64/383 (16%), Positives = 119/383 (31%), Gaps = 41/383 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V++ EPG Sbjct: 218 VFDMGAEIGFNMYLLDIGGGFPGSEDVKLKFEEVTSVINPALDKYFPSDSGVRVIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y++ + G +C D E +++GD + FE++ Y + Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCNLPEMQVGDWMLFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKA 353 + FNG PTI T + Sbjct: 394 ASTFNGFQRPTIYYVMSGPTWQL 416 >gi|320094245|ref|ZP_08026047.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978823|gb|EFW10364.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 178 str. F0338] Length = 473 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 60/412 (14%), Positives = 113/412 (27%), Gaps = 49/412 (11%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD 53 + TP +++D L + AG A K F + + + Sbjct: 55 LGTPLFVVDLADLAARARVWVSAMAEEFWDGYGMAGGDAFYASKAFLSAEVARLVAAEGM 114 Query: 54 GTTSSSLYEVMLG-HEKFGGETHA-YNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDK 110 G ++SL E+ L + D EI+ A+ + I ++ ++ + Sbjct: 115 GIDTASLGELTLALRAGVDPGRIGLHGNNKGDAEIELALQAGIHRIFIDSAHEVGAVERI 174 Query: 111 AQKLHKKIGLRIN--PSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVN 159 A +L + + + V + G D E+ Sbjct: 175 AARLGVEAPVMVRLKSGVHAGGNEYIATAHEDQKFGVSVADGQALDVVRRIREAPHLRFL 234 Query: 160 GLMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF- 214 GL H + ++ + + I LGGG+ Sbjct: 235 GLHSHIGSQIFGTAAFEEAARVVVDFAARIRDELGVETGAIDLGGGVGIAYTGQDPVPDS 294 Query: 215 ----CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI------KN 257 + L + + EPG ++V TV + + + Sbjct: 295 PAAVARALAGVVRERCESLRLPVPHVSTEPGRSVVGPAALTLYTVGVVKDVSLPGGGVRR 354 Query: 258 LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PV 312 V VD + ++ L A G V G+ C +GDI V Sbjct: 355 YVAVDGGMSDNIRPALYGASYTAALAGREGAEGLARCRVVGKHCESGDIVVRDVDLPADV 414 Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 GD I+ Y + + +N + P + +R + Sbjct: 415 GAGDVIAVPATGAYGYSMASNYNMLTKPGVVGVGAGEPHWLVRPQGLDHLLA 466 >gi|16761285|ref|NP_456902.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141019|ref|NP_804361.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412743|ref|YP_149818.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|168242485|ref|ZP_02667417.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168817903|ref|ZP_02829903.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445823|ref|YP_002041624.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194447678|ref|YP_002046416.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197247933|ref|YP_002147321.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197361677|ref|YP_002141313.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|204929227|ref|ZP_03220370.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213161327|ref|ZP_03347037.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426984|ref|ZP_03359734.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213621623|ref|ZP_03374406.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213852682|ref|ZP_03382214.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238912361|ref|ZP_04656198.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289827480|ref|ZP_06546092.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25512762|pir||AF0801 probable amino acid decarboxylase STY2590 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503584|emb|CAD07592.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi] gi|29136644|gb|AAO68210.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127000|gb|AAV76506.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194404486|gb|ACF64708.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194405982|gb|ACF66201.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197093153|emb|CAR58597.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197211636|gb|ACH49033.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204321771|gb|EDZ06970.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205338587|gb|EDZ25351.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344959|gb|EDZ31723.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086795|emb|CBY96567.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322617105|gb|EFY14011.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617589|gb|EFY14488.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624781|gb|EFY21610.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630331|gb|EFY27101.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634511|gb|EFY31244.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639222|gb|EFY35914.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640085|gb|EFY36752.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645695|gb|EFY42219.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652059|gb|EFY48422.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656231|gb|EFY52528.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659383|gb|EFY55630.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665843|gb|EFY62026.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669918|gb|EFY66059.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673903|gb|EFY70000.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678662|gb|EFY74718.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683543|gb|EFY79557.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687618|gb|EFY83588.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193547|gb|EFZ78752.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198454|gb|EFZ83556.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204566|gb|EFZ89569.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208496|gb|EFZ93435.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213633|gb|EFZ98422.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218331|gb|EGA03041.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222914|gb|EGA07263.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224511|gb|EGA08793.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232326|gb|EGA16429.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235640|gb|EGA19724.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241200|gb|EGA25236.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244942|gb|EGA28944.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250061|gb|EGA33955.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253845|gb|EGA37670.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254982|gb|EGA38773.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259831|gb|EGA43463.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264148|gb|EGA47655.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270846|gb|EGA54284.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 465 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ I +EPG + + L T V + Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 K +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461 >gi|168237385|ref|ZP_02662443.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735492|ref|YP_002115431.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710994|gb|ACF90215.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289617|gb|EDY28980.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 465 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 76/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L +++L K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRRLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ I +EPG + + L T V + Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 K +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461 >gi|92118880|ref|YP_578609.1| ornithine decarboxylase [Nitrobacter hamburgensis X14] gi|91801774|gb|ABE64149.1| ornithine decarboxylase [Nitrobacter hamburgensis X14] Length = 380 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 112/358 (31%), Gaps = 29/358 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N T ++ A+K A + L ++++ E+ Sbjct: 21 PCLVVDLDVVRDNYQTFAKAL--PDSRVFYAVKANPAPEVLSLLASLGSCFDTATVAEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ + A + +++ K A + Sbjct: 79 MALAAGATPDRVSFGNTIKKERDIARAYALGIRLFAVDCTAEVEKIARAAPGAKVFCRIL 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + D + G+ FH + + + L Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVDVLDLAKRLSLEPVGISFHVGSQQRKVKAWDRALAM 196 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232 + + F + +++GGG + + L++ + +E Sbjct: 197 VSQVFRDCAERGINLTMVNMGGGFPTKYLRDVPPVVQYGRSIFRALRKHFGNQIPETIIE 256 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284 PG +V N + T V+ IS + S + + + + Y Sbjct: 257 PGRGMVGNAGVIETEVVLISRKSDDDENRWVYLDIGKFSGLAETMDESIRYAIRTPHDGA 316 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 ++ G +C + D+ E + ++IGD++ E Y + FNGI Sbjct: 317 EMT-PCVLAGPTCDSADVLYEKQPYPLPVTLEIGDKLLIEGTGAYTSTYSSVAFNGIP 373 >gi|213401143|ref|XP_002171344.1| ornithine decarboxylase [Schizosaccharomyces japonicus yFS275] gi|211999391|gb|EEB05051.1| ornithine decarboxylase [Schizosaccharomyces japonicus yFS275] Length = 431 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 59/367 (16%), Positives = 112/367 (30%), Gaps = 30/367 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ L V+ A+KC + L ++ G +S E+ Sbjct: 69 FFVADLAEVYRQLVRWHTNLPR--VQPFYAVKCNPDPRVLALLVKFGTGFDCASKGELQQ 126 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K N + + +K K + ++ LRI+ Sbjct: 127 ILSLGVSPERIVYANPCKAINYIRYARNNNVDFMTFDNTEELYKCKQHHPNARLLLRIST 186 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + S L+ E+ ++ NV G+ FH N F + Sbjct: 187 NDENSICRLSLKFGAPMSETEELLRVAKTLDLNVVGVSFHVGSGNLDPASFIDAICRSRV 246 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV---QIYLEPGEAIV 238 F + + +GGG + L+E + + +I EPG V Sbjct: 247 VFDQGERYGFHFNTLDIGGGF----MSDSFEQTAAILREQLDTHFPANVRIIAEPGRFFV 302 Query: 239 TNTTTLNTTVLDISENIKNLVIVD-----------SSVEAHVPDYLLYQESATIYPNT-- 285 TL V+ + ++ + H + A Sbjct: 303 ATAFTLAVNVVAKRRIPEENKVMYYVNDGVYGSLNCILFDHQHPVARVLKHAGRMCYNQY 362 Query: 286 ---GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 G + + G +C + D+ +++GD I F+D Y + + FNG Sbjct: 363 VGTGDHVCSIWGPTCDSLDVIASDARLPFELEVGDWIYFDDAGAYTVAAASSFNGFQTSK 422 Query: 342 IAVKNVD 348 + + D Sbjct: 423 VEYVSTD 429 >gi|168261617|ref|ZP_02683590.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|197265590|ref|ZP_03165664.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197243845|gb|EDY26465.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205349442|gb|EDZ36073.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 465 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ I +EPG + + L T V + Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 K +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461 >gi|200386842|ref|ZP_03213454.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199603940|gb|EDZ02485.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 465 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 76/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ I +EPG + + L T V + Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAVHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 + +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 404 LPRETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461 >gi|157363014|ref|YP_001469781.1| ornithine decarboxylase [Thermotoga lettingae TMO] gi|157313618|gb|ABV32717.1| Ornithine decarboxylase [Thermotoga lettingae TMO] Length = 376 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 56/367 (15%), Positives = 124/367 (33%), Gaps = 29/367 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + N K+ A+K + + + L +S+ E Sbjct: 15 ETPFLIIDLDIIEENYRKLAAAI--PDCKIFYAIKANSHPRILERLRDLGSNFDVASIGE 72 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + K + +A ++ +L+K + A I Sbjct: 73 IKKLMNLGVTADRMIFANPIKREKDIAEAYDLGVYLFAADSTMELDKIAENAPGSQVVIR 132 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVN--GLMFHNNCENKSFLCFS 176 + + + +R F D I ++ + G+ FH +N +S Sbjct: 133 VAV-----ENTHSDWPLSRKFGVDLLVAVDLIAYAQKLRLTPVGVSFHVGSQNYDPHSWS 187 Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSV--- 227 ++ + K F +F + + +GGGI V++ + + + ++ Sbjct: 188 NAIERVAKIFYWAERNFGIHLRVLDIGGGIPIKHVKPIPTVEEIGEIVLQSISEHLYGVR 247 Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISEN--IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 QI+ EPG ++V N+ L + VL + + + I + ++ + Sbjct: 248 NLQIFAEPGRSMVGNSGILVSKVLLRCQRGSEEWVYIDAGVFHGLMETIENFRYEIEVDG 307 Query: 284 NTGPY--TAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ G +C + D + + + D + F + Y + FNGI P Sbjct: 308 KESEQKIPFVLAGPTCDSVDKIYDDALLSYNITLDDIVYFINAGAYTVEYGTNFNGIPSP 367 Query: 341 TIAVKNV 347 + Sbjct: 368 KVYFLQD 374 >gi|268325449|emb|CBH39037.1| diaminopimelate decarboxylase [uncultured archaeon] gi|268325761|emb|CBH39349.1| diaminopimelate decarboxylase [uncultured archaeon] Length = 478 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 63/442 (14%), Positives = 130/442 (29%), Gaps = 79/442 (17%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++ ++ + +N + A+K + + L + G +S Sbjct: 28 GTPLYVLFEELIESNYKQYQTALNDVYKNHLICYAVKANTTFAIIKLLGELGAGADVASE 87 Query: 61 YEVMLGH-EKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 YE+ A + ++ + N I + +L+ + A++L Sbjct: 88 YELQFTLDAGIPPAKIRANGNCKSEQYLEECIKNGILINVDPEEELDILNETARELGMAA 147 Query: 119 GLRINPSVSYSKFIL---ADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCE 168 + + + K I + +S+ G + E+ K + NGLM H + Sbjct: 148 KINLRLAGFPLKHITSPAITTSSEWSKFGIPVQRAKEALQKVLRLDHLIPNGLMVHLGSQ 207 Query: 169 NKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD--------------KDYPV 211 + +L + + ++ I++GGG + Sbjct: 208 ITDMGAYHLVLNELIKLAADADKIGFDVKEINIGGGCGISYLGKEEWNGIKSKIADTNDA 267 Query: 212 KDFCQRLKEFSEK--------------------------------------YSVQIYLEP 233 + + K ++ +EP Sbjct: 268 TWANELIGYNCNKEWVSEELYCPFTPDTFIQKLFNETYTANRTFKERLEAIELPKVVVEP 327 Query: 234 GEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAH-----VPDYLLYQESATIYPNTG 286 G ++V N V + +N+V VD+ V H VP+ L E A Sbjct: 328 GRSLVGNAQVTLVRVCHVGTTPSGQNIVHVDAGVNHHSQNIIVPEQLHRMEIANDTDTAA 387 Query: 287 PYTAMVCGRSCLAGDIFG--EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + + G C GD+ + + GD I D Y+ + N P + Sbjct: 388 GFETFIAGNLCYTGDLLCRIKNTLNSKPERGDYIIIYDTGAYSDFFASNTNSFPRPAKVM 447 Query: 345 KNV-DGTIKAIREFSYNDYYNN 365 ++ + D ++ Sbjct: 448 VTKAGKDRVLVKRETLFDVFHR 469 >gi|312377939|gb|EFR24645.1| hypothetical protein AND_10627 [Anopheles darlingi] Length = 446 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 67/375 (17%), Positives = 123/375 (32%), Gaps = 28/375 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +++D ++ L + K VK A+KC + TL+ G +S E+ Sbjct: 35 PLHVLDLDDVV--LKHYGWCAKMPRVKPFYAVKCNDDPRILQTLHMLGAGFDCASKGELE 92 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K A T+ F+ +L K + H + +R Sbjct: 93 RILGLGVDPDNIIFAQPAKSVPSLLYARSKQVLTMTFDGAVELEKIHRHYPEAHLVLRIR 152 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + P R G + NV G+ FH + + + ++ Sbjct: 153 HDSQKVRCSLGKKFGCEP-VRDGPELLRYAAELGMNVVGISFHVGSDCEEHEVYYDAVQV 211 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + F + ++ + +GGG + + V + F +V+I EPG Sbjct: 212 AKGLFDYAKTLGYKLTVLDIGGGFPGDNNKPLDRFAVAVNAAIDRFFPADCNVRIMAEPG 271 Query: 235 EAIVTNTTTLNTTVL------------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 V + TL + V I + + D Q + I Sbjct: 272 RYYVASAVTLVSFVESKRVVKEVQEEDGTECTIMHYYLNDGVFGTFYTTAHEAQPAIPIV 331 Query: 283 PNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 Y +MV G +C + D+ +++GD + FE+ Y FNG + Sbjct: 332 ARKPGATEYRSMVWGPTCDSVDLILNDWKLPELELGDSVVFENCGAYTSVLSCRFNGFAL 391 Query: 340 PTIAVKNVDGTIKAI 354 P + +GT K + Sbjct: 392 PKVVAYLREGTWKLL 406 >gi|218531665|ref|YP_002422481.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium chloromethanicum CM4] gi|218523968|gb|ACK84553.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium chloromethanicum CM4] Length = 428 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 45/390 (11%), Positives = 97/390 (24%), Gaps = 37/390 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + ++ ++K + +Q G +S E Sbjct: 39 GTPLFVYDADTMRRIYRALCAALADF-AEVDFSVKANPNPAVIRVFSQEGAGAEIASGAE 97 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + + K + I ++ + A++ ++ Sbjct: 98 FDAAIRAGVPPDKILFAGPGKGAADLDRVIGDGIGEIHLENREEIVRVAAAAERHGVRVR 157 Query: 120 LRINPSVSYSKFIL-ADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171 + + + + S G +D + + GL + Sbjct: 158 VALRINPGATAQGGAMRMGGKPSPFGFDEEDIEAAIDTVEAAPRLRLVGLHLFAGTQGLK 217 Query: 172 FL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----------KDFCQ 216 + L + +E I LGGG+ D Sbjct: 218 ADTLLGQWRYGLGLAARIANRTGRPLETIDLGGGLGIPYFSGDTALDLGAIRAGLPDLIA 277 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY---- 272 L+ S ++ LEPG + VL + E+ + ++ H Sbjct: 278 TLRADPLMASARVVLEPGRYLTGPAGVYVARVLALKESRGSRFVITDGGMHHHLAASGNL 337 Query: 273 -----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + +A V G C D+ P+ GD ++ Y Sbjct: 338 GQIVKRDFPLAAVTDLGGERAATAVVGPLCTPLDMLARAAPLPPLAEGDLVAVLQSGAYG 397 Query: 328 INRKNW-FNGINMPTIAVKNVDGTIKAIRE 356 + F P + + + Sbjct: 398 LTASPMGFLSHPTPAEVLVDGGEAREIRAR 427 >gi|262204912|dbj|BAI48036.1| ornithine decarboxylase 1 [Sus scrofa] Length = 461 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 65/379 (17%), Positives = 116/379 (30%), Gaps = 33/379 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVQTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ +V G+ FH F+ + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARDLDIDVIGVSFHVGSGCTDPETFAQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPPDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ V S + D+ Q Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEEEASEQTFMYYVNDGVYGSFNCILYDHAHVQ 337 Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P+ Y++ + G +C D E + +GD + FE++ Y + + F Sbjct: 338 PLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCRLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNVDGTIKA 353 NG P I T + Sbjct: 398 NGFQRPAIYYVMSGPTWQL 416 >gi|124298701|gb|ABN04356.1| putative ornithine decarboxylase [Theobroma cacao] Length = 411 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 108/359 (30%), Gaps = 23/359 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++ D + R + A+KC + L G +S E+ Sbjct: 47 PFYVLDLGVVMALFD--KWARNLPMAQPFYAVKCNPNPALLGALATLGSGFDCASKAEIE 104 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + K A + F++ +L K K K I ++ Sbjct: 105 SVLSLGVSPGRIIFANPCKAESHIKYAATVGVNLTTFDSKEELEKIKKWHPKCALLIRVK 164 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + ++ V G+ FH F + + Sbjct: 165 APDDGGARCPLGPKY-GALPEEVTPLLQAAQTARLTVTGVSFHIGSGAMQFRAYREAIAA 223 Query: 182 IEKEFGH----FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + F + ++ +++GGG + F + S+ + EPG Sbjct: 224 AKTVFETAARLGMPKMHVLNIGGGFTAGPQFAEAASTVKAALQAYFPNEPSLTVIAEPGR 283 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDY----LLYQESATIYPNTG 286 + TL T ++ S+ + D+ + A+ G Sbjct: 284 FFAESAFTLATNIIGKRVRGDLREYWINDGIYGSMNCILYDHAVVTCMPLARASSPRCKG 343 Query: 287 PYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 T V G +C A D + + +++ D + F ++ Y + FNG N I Sbjct: 344 ARTYDSTVFGPTCDALDTVLKVYPLPELQVNDWLVFPNMGAYTAAAGSNFNGFNTSAIL 402 >gi|326916504|ref|XP_003204547.1| PREDICTED: ornithine decarboxylase-like [Meleagris gallopavo] Length = 464 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 64/392 (16%), Positives = 118/392 (30%), Gaps = 44/392 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + V A+KC + + TL G +S E+ L Sbjct: 44 FYVADLGDIVK--KHMRWHKALPRVTPFYAVKCNDSEAVVKTLAAVGAGFDCASKTEIQL 101 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + S++ K K+ LRI Sbjct: 102 VQSVGVPPERIIYANPCKQLSQIKHAASSGVQMMTFDSEVELMKIARAHPKAKLVLRITT 161 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + + G+ FH F + + Sbjct: 162 DDSKAVCRLSVKFGATLKTSRLLLERAKELDLVIVGVSFHVGSGCTDPETFVQAISDARC 221 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V I EPG Sbjct: 222 VFDMGAELGFSMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPLDSEVTIIAEPGR 281 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 282 YYVASAFTLAVNIIAKKIVIKEQTGSDDEDDVNDKTLMYYVNDGVYGSFNCILYDHAHVK 341 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y+ + G +C D E +++GD I FE++ Y + Sbjct: 342 PVLQKRPKPDDSC----YSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENMGAYTVAA 397 Query: 331 KNWFNGINMPTIAVKNVDGTIKA---IREFSY 359 + FNG PTI + I+E + Sbjct: 398 ASTFNGFQRPTIHYVMSRPAWQLMQQIKEQEF 429 >gi|170049417|ref|XP_001855927.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167871262|gb|EDS34645.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 436 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 116/365 (31%), Gaps = 27/365 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +++D ++ K V A+KC + TL G +S E+ Sbjct: 52 PVHILDLDDVVAKHQNWRR--KLPRVDPFYAVKCNDDPAIVQTLIALGAGFDCASKAEIE 109 Query: 65 LGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + Y K D + A + + F+ +L+K + + + Sbjct: 110 LVLQRGGDPSRIIYAHTAKSIDSLVYAKACGINLMTFDGEIELDKINQVHPEASLVLRIH 169 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + P + + +S +V G+ FH N CF +K Sbjct: 170 YDSANAQVSLGKKFGCDPEHEAPQLLRYA-KSLGLSVVGISFHVGSGNSDHECFYGAIKA 228 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEKYSVQIYLEPG 234 +K F + + + +GGG Y + F K +V++ EPG Sbjct: 229 AKKLFDYAQSLGYDLRLLDIGGGYPGDHDKPIDPYATTINGALQRFFPLKTNVRVIAEPG 288 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP------DYLLYQESATIYPNTGPY 288 V + TL V V + D+L ++ Sbjct: 289 TYYVASAVTLIANVQSKRIVRTPQGTVRELMYYLNDGLFGSFDWLNPRKYPPQVIPGNRQ 348 Query: 289 TAM--------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G +C + D+ + ++IGD + F+D+ Y FNG P Sbjct: 349 LVRSRELFLTTLWGPTCDSTDLILSGMAMEELQIGDFLVFDDMGAYGTVLATNFNGFAKP 408 Query: 341 TIAVK 345 + V Sbjct: 409 KVMVY 413 >gi|307591535|ref|YP_003900334.1| Diaminopimelate decarboxylase [Cyanothece sp. PCC 7822] gi|306986389|gb|ADN18268.1| Diaminopimelate decarboxylase [Cyanothece sp. PCC 7822] Length = 409 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 120/378 (31%), Gaps = 19/378 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P YL + L + + A + + G +++ ++ Sbjct: 31 SPLYLYQGEVLRQEISHITRSIPYHNTRFQFATVTNGNIALLKIFKELGWGLHANTPGDI 90 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH---KK 117 LG F + Y+ + + + N + ++VSQL ++L Sbjct: 91 YLGLKAGFKSDNIVYSGSNLNRQEIEQLFNWNIKILNLDSVSQLQLCCQIYEELKGKLTP 150 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 L ++ RP + +S + GL F+ + F+ Sbjct: 151 PKLGFRLNLPELTGESRIGIRPEEF--PQALYIAQSAGLKIQGLHFYRGTGTNATKAFTG 208 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYSVQI--YL 231 +++ + K + ++ GGG + + + F + L E K + +I + Sbjct: 209 VIETLIKTC-QLLPDWNYLDFGGGFGYRYQHQGIQFDWGIFGEALTEALNKLNRKIELII 267 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPYT- 289 EPG A++ TL V+ + +I + A++ + + Sbjct: 268 EPGRAVIAACGTLLAQVVSVKWQENKQIIGVDTTVANLSVPSVHGGYREIVTWKENTEQL 327 Query: 290 --AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 VCG + + D G+ ++IGD I DV Y + F + Sbjct: 328 YLTDVCGNTTYSRDYLGKNCQLPALEIGDMIGILDVGAYGYAMSSHFLHRPRAAEVLLEG 387 Query: 348 DGTIKAIREFSYNDYYNN 365 R Y+ NN Sbjct: 388 KTHKLIRRREDYSILLNN 405 >gi|237807627|ref|YP_002892067.1| Ornithine decarboxylase [Tolumonas auensis DSM 9187] gi|237499888|gb|ACQ92481.1| Ornithine decarboxylase [Tolumonas auensis DSM 9187] Length = 386 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 124/366 (33%), Gaps = 18/366 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P ++D+ + GV+L ALK + TL G ++ E Sbjct: 20 GSPLLVLDQAAVRKQYRALTQAL--PGVRLHYALKPLPHSAVVATLKAEGCGFDLATNGE 77 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V + E + + + K +F + + K + ++ LR Sbjct: 78 VDVMLENQINPDDCIHTHPIKRDGDIRYALEYGCKVFVFDNPVELDKFLPYQDKAELLLR 137 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE---NKSFLCFSAM 178 ++ +K L+ K ++ NV GL FH + +K + Sbjct: 138 VSFPNPETKVDLSKKFGCTPEAALPLLRKAKAMGLNVIGLSFHVGSQVPNSKRHVEAITS 197 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIYL--E 232 I ++ ++ + +GGG D+ + +FC ++E I L E Sbjct: 198 CNQILRDAAAEDINLQVLDIGGGFPVNYGADGADFDIYEFCAPIREALSHTPKGIRLLAE 257 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP 287 PG I T +V+ +E + S + D++ Y +SA Sbjct: 258 PGRFISAPCMTSVASVMGKAERFERTWYYLDDGLYGSYSGQLFDHINYPKSAPYATGEAK 317 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 A++ G +C + D+ + + +GD I + + Y FN +I V + Sbjct: 318 -PAVLAGPTCDSIDVLADDIDLPELDVGDVIVGKMMGAYTWASATEFNFFRKASILVIDS 376 Query: 348 DGTIKA 353 I+ Sbjct: 377 QEAIEI 382 >gi|172072645|ref|NP_001116455.1| ornithine decarboxylase [Sus scrofa] gi|170673179|gb|ACB30110.1| ornithine decarboxylase 1.ODC1 [Sus scrofa] Length = 461 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 65/379 (17%), Positives = 116/379 (30%), Gaps = 33/379 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVQTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ +V G+ FH F+ + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARDLDIDVIGVSFHVGSGCTDPETFAQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPPDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ V S + D+ Q Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEEEASEQTFMYYVNDGVYGSFNCILYDHAHVQ 337 Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P+ Y++ + G +C D E + +GD + FE++ Y + + F Sbjct: 338 PLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCRLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNVDGTIKA 353 NG P I T + Sbjct: 398 NGFQRPAIYYVMSGPTWQL 416 >gi|16765687|ref|NP_461302.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993048|ref|ZP_02574143.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16420903|gb|AAL21261.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205328829|gb|EDZ15593.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247566|emb|CBG25393.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994461|gb|ACY89346.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158918|emb|CBW18431.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913351|dbj|BAJ37325.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222938|gb|EFX48009.1| Diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130692|gb|ADX18122.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989293|gb|AEF08276.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 465 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ I +EPG + + L T V + Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 K +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGDTRLIRREDSYEDMVK 461 >gi|114576061|ref|XP_001156995.1| PREDICTED: ornithine decarboxylase 1 isoform 4 [Pan troglodytes] gi|114576063|ref|XP_001157039.1| PREDICTED: ornithine decarboxylase isoform 5 [Pan troglodytes] gi|114576065|ref|XP_001157192.1| PREDICTED: ornithine decarboxylase 1 isoform 8 [Pan troglodytes] gi|114576067|ref|XP_001157249.1| PREDICTED: ornithine decarboxylase 1 isoform 9 [Pan troglodytes] gi|114576069|ref|XP_001157295.1| PREDICTED: ornithine decarboxylase 1 isoform 10 [Pan troglodytes] gi|114576071|ref|XP_001157362.1| PREDICTED: ornithine decarboxylase 1 isoform 11 [Pan troglodytes] gi|114576073|ref|XP_001157412.1| PREDICTED: ornithine decarboxylase 1 isoform 12 [Pan troglodytes] gi|114576075|ref|XP_001157463.1| PREDICTED: ornithine decarboxylase 1 isoform 13 [Pan troglodytes] gi|114576077|ref|XP_001157520.1| PREDICTED: ornithine decarboxylase isoform 14 [Pan troglodytes] gi|114576079|ref|XP_001157580.1| PREDICTED: ornithine decarboxylase 1 isoform 15 [Pan troglodytes] gi|114576081|ref|XP_515299.2| PREDICTED: ornithine decarboxylase 1 isoform 17 [Pan troglodytes] gi|114576083|ref|XP_001157701.1| PREDICTED: ornithine decarboxylase 1 isoform 16 [Pan troglodytes] Length = 461 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 67/392 (17%), Positives = 123/392 (31%), Gaps = 41/392 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ R ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y++ + G +C D E + +GD + FE++ Y + Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + FNG PTI + +++F D+ Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425 >gi|126324023|ref|XP_001362614.1| PREDICTED: similar to membrane protein palmitoylated 4 [Monodelphis domestica] Length = 461 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 64/374 (17%), Positives = 115/374 (30%), Gaps = 33/374 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L + + V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWYKALPRVTPFYAVKCNDSRAILKTLAAVGAGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K +N + S++ K K+ L I Sbjct: 98 VQSLGVPPGRIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLSIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEISSVINPALDKYFPPDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------DISENIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ D + V S + D+ + Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDEANDQTFMYYVNDGVYGSFNCILFDHAHVK 337 Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P+ Y++ + G +C D E + +GD + FE++ Y + + F Sbjct: 338 PLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNVD 348 NG PTI Sbjct: 398 NGFQRPTIYYVMSG 411 >gi|326771975|ref|ZP_08231260.1| diaminopimelate decarboxylase [Actinomyces viscosus C505] gi|326638108|gb|EGE39009.1| diaminopimelate decarboxylase [Actinomyces viscosus C505] Length = 486 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 59/430 (13%), Positives = 126/430 (29%), Gaps = 68/430 (15%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDG 54 +P +++D+ L + AG + A K F + + + G Sbjct: 54 PSPVFVLDEADLRGRAASWAAAMHEEFWPSYGMAGGEAFYAGKAFLTTKVAQWVLEEGMG 113 Query: 55 TTSSSLYEV---MLGHEKFGGETHA--------YNVAYKDCEID-AVLSNCDTIIFNTVS 102 ++S E+ + ++ GE + EI A+ + ++ +++ Sbjct: 114 IDTASRGELAVSLAALQEVDGEEATTDATRLGLHGNGKTQAEIAVALTHHVGHLVLDSLE 173 Query: 103 QLNKFKDKAQKLHK----------KIGLRINPSVSYSKFILADPNRPFSRLGEK------ 146 ++ ++L K+ +R+ V + G Sbjct: 174 EVELAVRAVRELRASSVYGPEETGKVMVRLTTGVHAGGHEYISTGHEDQKFGLSVHGGAA 233 Query: 147 ---CKDKIESEIKNVNGLMFHNNCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLG 199 I + ++GL H + F +L + + LG Sbjct: 234 RQAIDAIIAAPELELHGLHSHIGSQILDLAGFREAVGIVLTLRHEVAVDTGHLCPEVDLG 293 Query: 200 GGIHFTDKDYPVKDF---------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTT 247 GG + ++E E+ + +EPG A+ TT T Sbjct: 294 GGYGIAYTGADPVPPSPAQVARTLAEAVRETCERLGDEVPTVSIEPGRAVAGPTTVTLYT 353 Query: 248 VLDISENI------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA------MVCGR 295 V + + V +D + ++ L T+ N P V G+ Sbjct: 354 VTGLKRVELGEGASRLYVSIDGGMSDNIRPALYEAAYTTLIANRRPDPQAGLVRSRVVGK 413 Query: 296 SCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 C +GD+ + +GD ++ Y + + +N P + + + Sbjct: 414 HCESGDVVVRDVDLPADLAVGDVLAVPATGAYGRSMASNYNLFTRPGVRWVREGESGWVL 473 Query: 355 REFSYNDYYN 364 R + D Sbjct: 474 RPETIEDLVR 483 >gi|49475973|ref|YP_034014.1| ornithine decarboxylase [Bartonella henselae str. Houston-1] gi|49238781|emb|CAF28047.1| Ornithine decarboxylase [Bartonella henselae str. Houston-1] Length = 377 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 114/363 (31%), Gaps = 26/363 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ A+K A + + L ++S+ E+ Sbjct: 18 PCLIVDLDIIRENYLNFEKALPQS--RIFYAIKANPAPEILNLLASLGSSFDAASVAEIE 75 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + ++ K A ++ K ++ R+ Sbjct: 76 MALKAGATSDRISFGNTIKKERDIAQAYALGISLYAVDCVEEVEKIARAAPGVRVFCRVL 135 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 +++ L+ + + G+ FH + + L + Sbjct: 136 TDGKGAEWPLSRKFGCVPAMAVDVLRRAHQLGLQAYGVSFHVGSQQTDLSAWDRALSDAA 195 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234 F H ++ +++GGG LK++ + +EPG Sbjct: 196 TVFRHLEHEGISLKLVNMGGGFPTRYLKDVPTTQAYGTVVFDSLKKYFGNRIPETIIEPG 255 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTG 286 +V N + T V+ IS+ N I + + + + + Y T + + Sbjct: 256 RGMVGNAGVIRTEVVLISKKADNDNIRWVYLDVGKFNGLTETMDEAIRYP-IETPHDDKA 314 Query: 287 PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI-NMPT 341 ++ G +C + D+ E + + +GD + Y + FNG +P+ Sbjct: 315 MEPCILAGPTCDSADVLYEKTPYLLPLSLTVGDELLIHGTGAYTATYASVAFNGFEPLPS 374 Query: 342 IAV 344 + Sbjct: 375 YVI 377 >gi|91975336|ref|YP_567995.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB5] gi|91681792|gb|ABE38094.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB5] Length = 380 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 109/356 (30%), Gaps = 25/356 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + + +N + ++ A+K A + L +S+ E+ Sbjct: 21 PCLVVDLEVVRDNFTSFARAL--PDSRVFYAVKANPAPEVLSLLASLGSCFDCASVQEIQ 78 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + +Y K A +F+ K K+ RI Sbjct: 79 MALAAGATPDRISYGNTIKKERDIARSYELGIRLFSVDCTAEVEKIARSAPGSKVFCRIL 138 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + +++ L+ + D + G+ FH + + + L Sbjct: 139 YDCAGAEWPLSRKFGCDPEMAVDVLDAAKRLGLEAYGISFHVGSQQRKVKAWDRALAMAA 198 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPG 234 F + +++GGG + + L++ + +EPG Sbjct: 199 TVFRDCAERGISLSMVNMGGGFPTKYLKEVPPVVQYGRSIFRALRKHFGNQIPETIIEPG 258 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTG 286 +V N + T V+ IS ++ + + + Y + Sbjct: 259 RGMVGNAGVIETEVVLISNKSDKDETRWVYLDIGKFGGLAETMDESIRYAIRSRHDGAEM 318 Query: 287 PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 ++ G +C + D+ E + ++IGD++ E Y FNG Sbjct: 319 T-PCVLAGPTCDSADVLYEKMPYPLPVTLEIGDKLLIEGTGAYTSTYSAVAFNGFP 373 >gi|325129406|gb|EGC52238.1| diaminopimelate decarboxylase [Neisseria meningitidis OX99.30304] Length = 342 Score = 166 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 113/325 (34%), Gaps = 22/325 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ K L + + A+K + G S E Sbjct: 18 GTPLYVYSKSALTEAFENYQTAFATLNPLVCYAVKANGNLSIIKHFASLGSGFDIVSDGE 77 Query: 63 VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + G +T V + EI+ A+ + ++ ++++ + A +L K Sbjct: 78 LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKVAP 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 + LR+NP V ++ G D +E+ + G+ H + Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHASRQSHLKIVGIDCHIGSQLT 197 Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224 + I + +E + LGGG+ +D + + Q +++ Sbjct: 198 DLSPLVEACERILVLVDQLADEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++ LEPG ++V N +L T V + KN V+VD+++ + L Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317 Query: 284 NTGPY---TAMVCGRSCLAGDIFGE 305 T TA + G C GD G+ Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGK 342 >gi|49474545|ref|YP_032587.1| ornithine decarboxylase [Bartonella quintana str. Toulouse] gi|49240049|emb|CAF26473.1| Ornithine decarboxylase [Bartonella quintana str. Toulouse] Length = 377 Score = 166 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 49/367 (13%), Positives = 116/367 (31%), Gaps = 34/367 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ A+K A + + L ++S+ E+ Sbjct: 18 PCLIVDLDVVRENYLNFEKALPQS--RIFYAIKANPAPEILNLLASLGSSFDAASVAEIE 75 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ + + A + V ++ K A + + Sbjct: 76 MALKAGATPDRISFGNTIKKERDIVQAYALGISLYAVDCVEEVEKIARAAPGVRVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179 + + P + + + +G+ FH + + L Sbjct: 136 TDGKGAEWPLSRKFGCVPAKAVDV----LRHAHQLGLQAHGVSFHVGSQQTDLRAWDRAL 191 Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + F H ++ I++GGG LK++ + Sbjct: 192 SDAATVFRHLEQEGISLKLINMGGGFPTRYLKDVPTTQAYGTVVFDSLKKYFGNRIPETI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + T V+ IS+ N + + + + + + Y T + Sbjct: 252 IEPGRGMVGNAGVIRTEVVLISKKADNDNVRWVYLDVGKFNGLTETMDEAIRYP-IETPH 310 Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI- 337 + ++ G +C + D+ E + + +GD + Y + FNG Sbjct: 311 DDKAMEPCILAGPTCDSADVLYEKTPYLLPLSLTVGDELLIHGTGAYTATYASVAFNGFE 370 Query: 338 NMPTIAV 344 +P+ + Sbjct: 371 PLPSYVI 377 >gi|219122853|ref|XP_002181752.1| diaminopimelate decarboxylase [Phaeodactylum tricornutum CCAP 1055/1] gi|217407028|gb|EEC46966.1| diaminopimelate decarboxylase [Phaeodactylum tricornutum CCAP 1055/1] Length = 481 Score = 166 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 72/413 (17%), Positives = 125/413 (30%), Gaps = 52/413 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y KL D L G+ + A+K + + +SS +E Sbjct: 63 GTPLYAYSIDKLEEAADACLAFPNAYGLTVRYAMKACPNASILKYFHSKNIHVDASSGFE 122 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V E + + + A++ + +VSQL +F + K+G+R Sbjct: 123 VRRAMDAGVPAENISLSTQELPEDFAALVDMGVKLNACSVSQLERFGEHYAGKGAKVGVR 182 Query: 122 INPSV-------SYSKFILADPNRPFSRLGEKCK--------DKIESEIKNVNGLMFHNN 166 +NP V S + F + P S G + D +E V + H Sbjct: 183 VNPGVGSGGFSASTTGFSKTNVGGPSSSFGIWHELVTDGTVPDIVERYGLEVERIHTHIG 242 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV--------KDFCQRL 218 + + K F ++ ++LGGG V K Sbjct: 243 SGSDPEIWQQVATK--SLSFCKVFPTVKTMNLGGGYKVGRNKGEVTTDLQKIGKPVADAF 300 Query: 219 KEFSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV----PDY 272 K+F+EK +Q+ +EPG +V L + V D ++A + Sbjct: 301 KKFAEKEGRELQMEIEPGTYLVAMAGALVSKVQDKVHTTGENSHTFLKLDAGMTDVLRPS 360 Query: 273 LLYQESATIYPN---------TGPYTAMVCGRSCLAGDIFGE---------FHFEKPVKI 314 L + +V G C +GD+ + + Sbjct: 361 LYGAVHPITILPGSGNSADVGDETESVVVVGHCCESGDLMTPAPGEPEQLAEQELRAAAV 420 Query: 315 GDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365 GD + + Y +N + + G IR + + Y N Sbjct: 421 GDILVMDGSGAYCSGMSTKNYNSFPEAPEVLVDKAGKAHLIRKRQTLSQIYEN 473 >gi|304404706|ref|ZP_07386367.1| Orn/DAP/Arg decarboxylase 2 [Paenibacillus curdlanolyticus YK9] gi|304346513|gb|EFM12346.1| Orn/DAP/Arg decarboxylase 2 [Paenibacillus curdlanolyticus YK9] Length = 426 Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 49/392 (12%), Positives = 111/392 (28%), Gaps = 34/392 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D + ++ +L + KC GM L + +S E Sbjct: 22 GTPLYLYDASVVEQKVNELRSCFPE-QAELFYSFKCNPLVGMAQLLLRQGCRVEVASGGE 80 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + K + A+ I ++++ A + + Sbjct: 81 LTAALHAGCDPRNIVFTSPGKTVEELQLAIRKGIYCINVENMAEIGLVDQIAAEQGLTVD 140 Query: 120 LRINPSVSYSKFILADPNRPFSR---------LGEKCKDKIESEIKNVNGLMFHNNCENK 170 + I + + A L E + + G + + Sbjct: 141 IAIRINPDEPQQHAASIKMSGVPSQFGMDPTYLPEAIETAQRMSNVRLIGFHIYLGTQIL 200 Query: 171 SFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFS 222 + F +++++ +GGG + + + + Sbjct: 201 QADAIIRHFDQSIRTAVDLADRFGLELQFLDIGGGFGVPYFPKETALDLASLREGIMQVW 260 Query: 223 EKY-----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQ 276 +++ + ++ +E G ++ + + VL E+ + ++ H L + Sbjct: 261 QEWESRLANTRLAIESGRFLMAESGVFVSKVLYTKESKGSRYVIGDGGSHQHASSAFLGR 320 Query: 277 ESATIYPN------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + +P G + V G C + D+ G GD + E Y + Sbjct: 321 YIRSNFPMRVIGEGDGEHEVTVTGPLCTSTDVIGNKVNLPIAAPGDLVVVEKSGAYGLTH 380 Query: 331 K-NWFNGINMPTIAVKNVDGTIKAIREFSYND 361 F MP + + D ++D Sbjct: 381 SPTMFLSHPMPAEVLFDQDRYWVLRERGQFSD 412 >gi|166711271|ref|ZP_02242478.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 869 Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 110/365 (30%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y + I + A+K A + L Q G S E Sbjct: 506 GTPRYAYHLPTVRVRARALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 V + + ++ E A + T+ + V L + + + I Sbjct: 564 VRRVFQVLPELSPRRVLFTPSFAPKAEYVAAFALGVTVTVDNVEALRNWPEV--FRGRNI 621 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172 LRI+ + S+ G ++ + + + G+ H ++ Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVNVARTLEVTITGVHAHLGSGVETG 681 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227 + M + +E I +GGG+ + + Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSADDEPFDLDVWAKGLAEVKAVHPGY 740 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V L +V I ++ V +D+ + + L + Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVQRVGLDAGMNTLIRPALYDAWHDIENLSQL 800 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPT 341 T + G C + D+FG+ + GD + D Y + + +N +P Sbjct: 801 DAPADSTFDIVGPICESSDVFGKRRRLPAATVPGDVVLVADTGAYGYSMASTYNQRELPR 860 Query: 342 IAVKN 346 V + Sbjct: 861 EEVID 865 >gi|240140165|ref|YP_002964642.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens AM1] gi|240010139|gb|ACS41365.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens AM1] Length = 429 Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 45/390 (11%), Positives = 95/390 (24%), Gaps = 37/390 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + ++ ++K + +Q G +S E Sbjct: 39 GTPLFVYDADTMRRIYRALCAALAGF-AEVDFSVKANPNPAVIRVFSQEGAGAEIASGAE 97 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + + K + I ++ + A++ + Sbjct: 98 FDAAIRAGVPPDKILFAGPGKGAADLDRVIGGGIGEIHLENREEIVRVAAAAERHGVHVR 157 Query: 120 LRINPSVSYSKFIL-ADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171 + + + + S G +D + + GL + Sbjct: 158 VALRINPGATAQGGAMRMGGKPSPFGFDEEDIEAAIDTAEAEPRLRLVGLHLFAGTQGLK 217 Query: 172 FL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----------KDFCQ 216 ++ L + +E I LGGG+ D Sbjct: 218 ADTLLGQWTYGLGLAARIASRIGRPLESIDLGGGLGIPYFSGDTALDLGAIRAGLPDLIA 277 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY---- 272 L+ S ++ LEPG + VL + E+ + ++ H Sbjct: 278 TLRADPLMASARVVLEPGRYLTGPAGVYVARVLAVKESRGSRFVITDGGMHHHLAASGNL 337 Query: 273 -----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + +A V G C D+ P+ GD ++ Y Sbjct: 338 GQIVKRDFPLAAVTDAGCERTQTAVVGPLCTPLDMLARAAPLPPLAEGDLVAVLQSGAYG 397 Query: 328 INRK-NWFNGINMPTIAVKNVDGTIKAIRE 356 + F P + + Sbjct: 398 LTASPTGFLSHPTPAEVLVEGGEAREIRAR 427 >gi|327537995|gb|EGF24689.1| Orn/DAP/Arg decarboxylase 2 [Rhodopirellula baltica WH47] Length = 388 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 114/361 (31%), Gaps = 21/361 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + K + GV L A K TLN S E Sbjct: 32 GTPLLVVSRSKAIETYWAMKNAL--PGVDLYYAAKANPDLHFLSTLNGENAFIDVCSPGE 89 Query: 63 VMLGHE-KFGGET--HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + F + H + + + + +F+ + K + ++ + Sbjct: 90 LKAALAAGFTPDRMLHTHPCKTDANLWECYEAGVNWFVFDNPIEAEKIRRLTPDVNLLLR 149 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 L + S L +++ V G FH + + + +L Sbjct: 150 LATTGASSRINLSAKFGCPMHEALELLAT--AKAKGLKVRGFSFHVGSQCLNPQDYVEVL 207 Query: 180 KNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 +++ + + +E + +GGG ++ L+E +++ Sbjct: 208 RSVREVWDEATKAGHHLEVLDIGGGFPAPYREDAPSIEAFGEVITNGLREIFGDLPIRLI 267 Query: 231 LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAH---VPDYLLYQESATIYPNT 285 EPG + T + TL T V+ + + D + + D+ + + Sbjct: 268 AEPGRGLCTESVTLITRVIGKSRRWELPWFFLDDGIYGSFSGKIFDHTDFPLLVENDGSR 327 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 +V G +C + DI + +++G+ + + Y + FNG+ M Sbjct: 328 ETVPCVVAGPTCDSTDIVSRDQWLPDLEVGELVLVPSMGAYAAASASPFNGLPMANSVAI 387 Query: 346 N 346 + Sbjct: 388 D 388 >gi|85059966|ref|YP_455668.1| diaminopimelate decarboxylase [Sodalis glossinidius str. 'morsitans'] gi|84780486|dbj|BAE75263.1| diaminopimelate decarboxylase [Sodalis glossinidius str. 'morsitans'] Length = 419 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 56/378 (14%), Positives = 116/378 (30%), Gaps = 46/378 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ + + + + + A K + + + S SL E+ Sbjct: 27 PVWVYEAETISALIAQLRRFD-----TIRFAQKACSNIHLLRLMRSQGVKVDSVSLGEIE 81 Query: 65 LGH-EKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 F + + D A + + + L + A+ + Sbjct: 82 RALLAGFLPGTENDEIVFTADLLDEPTLARVVELGIPVNAGSTDMLAQLG--ARSPGHGV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G +D I+ + + G+ H + Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYEDLPQAVALIQHDGLRLIGIHMHIGSGVD-Y 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223 S + + ++ + IS GGG+ + Y R + S Sbjct: 199 DHLSQVCDAMVQQVMASGLDLAAISAGGGLSIPYRSGEEAIDTEHYFGLWDAARRRISSH 258 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + V + +EPG +V + L T V + ++ V+VD+ + + A Sbjct: 259 LGHPVTLEIEPGRFLVAESGVLITQVRAVKDMGSRHFVLVDAGFNDLMRPAMYGSYHAIS 318 Query: 282 YPNTGPY--------TAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAGY 326 +V G C +GD+F + ++GD + F D Y Sbjct: 319 LLPADGRDRGAQPLRETVVGGPLCESGDVFTQTAGGGIAPRRLPLAQVGDYLVFHDTGAY 378 Query: 327 NINRKNWFNGINMPTIAV 344 + + +N + + Sbjct: 379 GASMSSNYNSRPLLPEVL 396 >gi|259013291|ref|NP_001158445.1| ornithine decarboxylase 1 [Saccoglossus kowalevskii] gi|196475493|gb|ACG76357.1| ornithine decarboxylase [Saccoglossus kowalevskii] Length = 493 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 65/396 (16%), Positives = 116/396 (29%), Gaps = 49/396 (12%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++++D ++N + + V A+KC + L G +S E+ Sbjct: 43 FFVMDFGDIVNKFEKWEALLPR--VHPFYAVKCNENPAVLRLLAALGTGFDCASKSEIKE 100 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y K A + F+ +L K + ++ LRI Sbjct: 101 ITDMGVSPSRIVYANPCKPNSHLKFAAQRKVSLMTFDNEMELQKIRKIY--PDAELVLRI 158 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 S ++ L + + NV G+ FH + FS +++ Sbjct: 159 LTDDSTAQCQLGLKYGCHPQHAPSLLRVAKELGLNVVGVSFHVGSGCRDASAFSDAIQSS 218 Query: 183 EKEFG---HFITQIEWISLGGGIH------FTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 F + + +GGG + ++ F E V+I EP Sbjct: 219 RMVFDYGSALGFDFQLLDIGGGYPGQSSAAISFEEMAGCINQALDVHFPEGCGVRIISEP 278 Query: 234 GEAIVTNTTTLNTTVLDIS-------------------------------ENIKNLVIVD 262 G V + TL V+ V Sbjct: 279 GRYFVASAFTLTLNVIAKRAVARDIQTFHVPGSEDLVANTVAPSQCDEPAYMYYCNDGVY 338 Query: 263 SSVEAHVPDYLLYQESA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 S + D+ Q S + + + + G SC D E + +GD I F Sbjct: 339 GSFNCLLFDHATVQPSLLKKMLLGEPKFASSLWGPSCDGLDRIMENCLLPELHVGDWIVF 398 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 ED+ Y + + FNG P + T ++ Sbjct: 399 EDMGAYTMCAASTFNGFPKPICYYMANESTWNFLKR 434 >gi|121998344|ref|YP_001003131.1| Orn/DAP/Arg decarboxylase 2 [Halorhodospira halophila SL1] gi|121589749|gb|ABM62329.1| Orn/DAP/Arg decarboxylase 2 [Halorhodospira halophila SL1] Length = 411 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 54/377 (14%), Positives = 105/377 (27%), Gaps = 36/377 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP++ D+ + + + + L A+K + L + +DG +S E Sbjct: 37 QTPFFAYDRAMIDHRVAALRATLP-PEIHLHYAIKANPMPELVQHLARMVDGLDVASAGE 95 Query: 63 VMLGHEK--FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + L E + +D E+ L + TI + +L + + A + + + Sbjct: 96 LALALETETAPADISIAGPGKQDHELARALESGVTINLESPGELERLAELANRHGRTPSV 155 Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 I + K + G + I + G +N + Sbjct: 156 AIRINPDFTLKTSGMQMGGGPKQFGIDTEQAPAVLHRIGELSFDFRGFQIFAGSQNLNTD 215 Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 I + F + + +++GGG+ R E ++ Sbjct: 216 ALITAQNGIFELFNRLADEAPAPVTLLNMGGGLGIPYFANDRPLDLDRYGEHLHRHVAAC 275 Query: 230 ---------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 LE G +V V+D + + +V H Sbjct: 276 RQRFPNVQIVLELGRYLVGEAGVYVVRVIDRKVSRGQVFLVTDGGMHHHLAASGNLGQTI 335 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 AT + V G C D+ G K GD I Y ++ Sbjct: 336 RRDYPIALATAMDHPAAEDVSVVGPLCTPLDVLGSRVPLPYAKPGDLIVVFQSGAYGLSA 395 Query: 331 KNWF--NGINMPTIAVK 345 + N + Sbjct: 396 SPTYFLN-HPKAAELLV 411 >gi|32475383|ref|NP_868377.1| lysine/ornithine decarboxylase [Rhodopirellula baltica SH 1] gi|32445924|emb|CAD78655.1| lysine/ornithine decarboxylase [Rhodopirellula baltica SH 1] Length = 398 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 114/361 (31%), Gaps = 21/361 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + K + GV L A K TLN S E Sbjct: 42 GTPLLVVSRSKAIETYWAMKNAL--PGVDLYYAAKANPDLHFLSTLNGENAFIDVCSPGE 99 Query: 63 VMLGHE-KFGGET--HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + F + H + + + + +F+ + K + ++ + Sbjct: 100 LKAALAAGFTPDRMLHTHPCKTDANLWECYEAGVNWFVFDNPIEAEKIRRLTPDVNLLLR 159 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 L + S L +++ V G FH + + + +L Sbjct: 160 LATTGASSRINLSAKFGCPMHEALELLAT--AKAKGLKVRGFSFHVGSQCLNPQDYVEVL 217 Query: 180 KNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 +++ + + +E + +GGG ++ L+E +++ Sbjct: 218 RSVREVWDEATKAGHHLEVLDIGGGFPAPYREDAPSIEAFGEVITNGLREIFGDLPIRLI 277 Query: 231 LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAH---VPDYLLYQESATIYPNT 285 EPG + T + TL T V+ + + D + + D+ + + Sbjct: 278 AEPGRGLCTESVTLITRVIGKSRRWELPWFFLDDGIYGSFSGKIFDHTDFPLLVENDGSR 337 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 +V G +C + DI + +++G+ + + Y + FNG+ M Sbjct: 338 ETVPCVVAGPTCDSTDIVSRDQWLPDLEVGELVLVPSMGAYAAASASPFNGLPMANSVAI 397 Query: 346 N 346 + Sbjct: 398 D 398 >gi|62180932|ref|YP_217349.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128565|gb|AAX66268.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715411|gb|EFZ06982.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 465 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 76/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 ++F + K+ I +EPG + + L T V + Sbjct: 285 QNFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWVKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 K +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 404 LPKETHVGDIVAFLDAGAYAIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461 >gi|315658303|ref|ZP_07911175.1| diaminopimelate decarboxylase [Staphylococcus lugdunensis M23590] gi|315496632|gb|EFU84955.1| diaminopimelate decarboxylase [Staphylococcus lugdunensis M23590] Length = 353 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 103/351 (29%), Gaps = 30/351 (8%) Query: 44 MFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNT 100 M + + S E+ F + ++ K + + + Sbjct: 1 MVKLVQEEGLQLDVVSEGELYTALSAGFDPKQIHFHGNNKTKREIQYGLENGIGYFVVDA 60 Query: 101 VSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKI 151 + ++ A + LR+NP V + S+ G K Sbjct: 61 LEEIELIDKYASDTVNVV-LRVNPGVEAHTHEFIQTGQEDSKFGLSIKYGLALEAVNKIK 119 Query: 152 ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 S+ + G+ FH + + K + Q+E ++LGGG + Sbjct: 120 ASKHLYLKGIHFHVGSQIEGTEAMIETAKIVLNWLSEQQIQVELLNLGGGFGIKYVEGDT 179 Query: 212 KDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260 + + + +I +EPG +IV V I + Sbjct: 180 SFPIEEGIAEITTAIKDITKELNYSVPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKY 239 Query: 261 VDSS--VEAHVPDYLLYQESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKI 314 V + H+ L + + + T + G+ C +GDI V Sbjct: 240 VSIDGGMSDHIRTALYDAQYEALLVNRHESADETVTISGKLCESGDIIIRNAKLPSSVHR 299 Query: 315 GDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 GD ++ Y+ + + +N + P++ + I+ S N Sbjct: 300 GDILAILSTGAYHYSMSSNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 350 >gi|110748906|ref|XP_393529.3| PREDICTED: ornithine decarboxylase-like [Apis mellifera] Length = 470 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 53/373 (14%), Positives = 107/373 (28%), Gaps = 26/373 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D ++ K V A+KC + + L G +S E+ Sbjct: 36 FYVLDIGDVVRKHQIWKE--KMPRVSPYYAVKCNDNLIVIEVLAALGIGFDCASKSEINK 93 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + K + + ++ K K K+ +RI Sbjct: 94 VLSVGVDPSRIIFANPAKPASHIRHSAVVGVDVMTADNESELHKIKKLHPTAKVVIRIRC 153 Query: 125 SVSYSKFILADPNRPFSRL-GEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L N+ G+ FH + F +++ + Sbjct: 154 DAEVAQCQLGMKFGCDPIFEAPNLLRLSRVLGLNIIGISFHVGSGCQDPPVFYRAIRHSK 213 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236 F + + +GGG + + E ++Y + EPG Sbjct: 214 ILFDLATDLGFKPYLLDIGGGYPGNKGS-SIDRIADVVNEALDEYFNTDAVHVIAEPGRF 272 Query: 237 IVTNTTTLNTTVLD--------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 V + TL T++ V S + D+ Sbjct: 273 YVASAFTLATSIHSKRSVRGDENSPNTITHNMYYINDGVYGSFNCLLYDHQHVIPIPLKK 332 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + + G +C D E + +GD I FE++ Y + + FNG +P + Sbjct: 333 GCGKMIPSSIWGPTCDGLDQVVENVLLHEMDLGDWIIFENMGAYTLPVASPFNGFPVPKV 392 Query: 343 AVKNVDGTIKAIR 355 + + ++ Sbjct: 393 HIVADENIWHLLK 405 >gi|150006522|ref|YP_001301266.1| diaminopimelate decarboxylase [Bacteroides vulgatus ATCC 8482] gi|265751974|ref|ZP_06087767.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_33FAA] gi|294778860|ref|ZP_06744277.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Bacteroides vulgatus PC510] gi|149934946|gb|ABR41644.1| diaminopimelate decarboxylase [Bacteroides vulgatus ATCC 8482] gi|263236766|gb|EEZ22236.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_33FAA] gi|294447313|gb|EFG15896.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Bacteroides vulgatus PC510] Length = 391 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 75/387 (19%), Positives = 146/387 (37%), Gaps = 25/387 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +KTP +++D KL++N+ + + + ++K + M LN+ S Sbjct: 6 LKTPCFILDSDKLVSNVLEFKRALNSRFSNHCIGYSIKTNSLPYMLHMLNELGCYAEVVS 65 Query: 60 LYEVMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E L + F YN A + N + +T ++ D ++ K Sbjct: 66 YTEYALALQVGFEKSHIVYNGPAKDKETFLDAIKNGAYVNIDTKREIEWLNDLNKQHSYK 125 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168 +G+R+N ++ A SR G E + + GL H Sbjct: 126 VGIRVNLNLGKISPEDAKEGESDSRFGFSFENGELEEAINKIQLCKNVKLGGLHLHRTSL 185 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH------FTDKDYPVKDFCQRLKEFS 222 +S + + K + ++++I +GGG T K+Y + L+E Sbjct: 186 TRSLNVYRNICKYAIRIINSLGLELDYIDVGGGYFGDKPNAPTYKEYVDTIYSSLLEEGI 245 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + +++ +EPG AIV + + + ++D + + +IV V + L ++ + Sbjct: 246 DVSKMKVIVEPGNAIVASPFSFLSEIIDTKKIGDSQIIVTDGSRNDVDPFFLKKDYFKSF 305 Query: 283 PNTGPYTA-----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 MV G SCL D + + +GDRI +++V Y + F Sbjct: 306 IRKQEEKVFIDSQMVVGCSCLEYDKLFTLQNQPLLNVGDRILYQNVGAYTMTLSPLFIRF 365 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 P + +K ++G E++ ND Sbjct: 366 -FPRVYLKTLNGYEIIREEWTVNDLKQ 391 >gi|205353474|ref|YP_002227275.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273255|emb|CAR38219.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628567|gb|EGE34910.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 465 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 77/418 (18%), Positives = 135/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ I +EPG + + L T V + Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWVKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 K +GD ++F D Y I + +N + + +G + IR SY D Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVRIDKNGETRLIRREDSYEDMVK 461 >gi|284047519|ref|YP_003397858.1| Lysine decarboxylase [Acidaminococcus fermentans DSM 20731] gi|283951740|gb|ADB46543.1| Lysine decarboxylase [Acidaminococcus fermentans DSM 20731] Length = 389 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 111/368 (30%), Gaps = 23/368 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ +++ N D +K+ A+K + D L +S E Sbjct: 22 GTPLLVLSLEQVEKNYDILRE--HIPQLKIHYAMKANPDLHILDLLINKGACFDVASDGE 79 Query: 63 VM-LGHEKFGGETHAYNVA-YKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIG 119 + L G+ Y D A + +++ S++ K + + Sbjct: 80 IRTLSQLGVSGDRMIYANPIKLDAGFRACNDAGVYRMTYDSESEIRKIAEHCPGATVLLR 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRI+ + ++ L K + +V G+ FH + S + + Sbjct: 140 LRIDNAKAHVDLNKKFGCPREKALDLMLK--AKEAGLDVAGIAFHVGSQTVSADPYFHAM 197 Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS----EKYSVQIYLE 232 + + + +GGG + + + + ++I+ E Sbjct: 198 DITRELMAEARARGLSMRVLDIGGGFPIPETGVHYNLTALLDQVAARLREDFSDLEIWAE 257 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT--GPYT 289 PG + L T V+ +E D + + Q + Sbjct: 258 PGRYMCGTAVNLITRVIGENERNGQNWYFLDDGIYGTFSGVIFDQWDFKLISFKDGKKIP 317 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 A G SC + DI +P+++GD + Y FNG + Sbjct: 318 ATFAGPSCDSLDIMFRGKMTEPLEVGDLLLVPVCGAYTSASATTFNGFKKARTVIWEE-- 375 Query: 350 TIKAIREF 357 +RE Sbjct: 376 ----VREE 379 >gi|332376635|gb|AEE63457.1| unknown [Dendroctonus ponderosae] Length = 462 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 60/377 (15%), Positives = 115/377 (30%), Gaps = 29/377 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ + +L + V+ A+KC + + L +S E+ Sbjct: 36 FYVCNLSSILEKHKGWQAVMPR--VEPHYAVKCNNDLAVLEILATLGACFDCASRAEIRK 93 Query: 66 GHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + A T+ F+ V +L+K ++ I +R+ Sbjct: 94 VLSLGVSPDRIIFANPAKISSHIRYAADVGVATMTFDDVCELHKIQNLYPSARLVIRIRV 153 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + P + D S NV G+ FH + F + Sbjct: 154 DATDAQCPLGMKFGCEPNDA--PQLLDVARSLNLNVVGVSFHVGSGCREPAVFRRAISAA 211 Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFC---QRLKEFSEKYSVQIYLEPGEA 236 F + + + +GGG L++F V++ EPG Sbjct: 212 RDVFDYASTVGFKFSLLDIGGGYPGVRGSSLTDIAAVVNNALEDFFRDMDVRVIAEPGRY 271 Query: 237 IVTNTTTLNTTVLDI---------------SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 VT+ TL + + V S + D+ + Sbjct: 272 YVTSAFTLACNIHSVRKITDVDDQGRRFETHRMYYINDGVYGSFNCVLYDHQVVCPVPLK 331 Query: 282 YPNTGPY-TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 ++ V G +C D E + IGD + FED+ Y + + FNG +P Sbjct: 332 EYPESRRISSSVWGPTCDGLDRVIEDISLPDMNIGDWMVFEDMGAYTLPVASTFNGFPVP 391 Query: 341 TIAVKNVDGTIKAIREF 357 + ++ F Sbjct: 392 EVCYIIKQHEWAQLKNF 408 >gi|299132171|ref|ZP_07025366.1| Orn/DAP/Arg decarboxylase 2 [Afipia sp. 1NLS2] gi|298592308|gb|EFI52508.1| Orn/DAP/Arg decarboxylase 2 [Afipia sp. 1NLS2] Length = 380 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 115/362 (31%), Gaps = 30/362 (8%) Query: 2 IKT-PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 + T P ++D + + +N T ++ A+K A + L ++++ Sbjct: 17 LDTEPCLVVDLEVVRDNYQTFAKAL--PDSRVFYAVKANPAPEVLSLLASLGSCFDTATV 74 Query: 61 YEVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + + ++ + A + V+++ K A Sbjct: 75 AEIEMALAAGATPDRISFGNTIKKERDIARAYALGIRLFAVDCVAEVEKIARSAPGAKVF 134 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + +++ L+ + + D + G+ FH + + + Sbjct: 135 CRIL--YDCAGAEWPLSRKFGCEPEMAVEVLDLAKRLRLEPVGISFHVGSQQRKVKAWDR 192 Query: 178 MLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQ 228 L + F + +++GGG + + L++ + Sbjct: 193 ALAMASQVFRDCAERGISLSMVNMGGGFPTKYLKDVPPVVQYGRSIFRALRKHFGNQIPE 252 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESAT 280 +EPG +V N + V+ IS+ + ++ + + + Y Sbjct: 253 TIIEPGRGMVGNAGVIEAEVVLISKKSDDDENRWVYLDIGKFGGLAETMDESIRYAIRTR 312 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNG 336 ++ G +C + D+ E ++IGD++ E Y + FNG Sbjct: 313 HDGAEMA-PCVLAGPTCDSADVMYEKVPYPLPVTLEIGDKVLIEGTGAYTSTYSSVAFNG 371 Query: 337 IN 338 I Sbjct: 372 IP 373 >gi|220930615|ref|YP_002507524.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulolyticum H10] gi|220000943|gb|ACL77544.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulolyticum H10] Length = 415 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 116/391 (29%), Gaps = 41/391 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP YL D +L + +A + ++K ++G+ L + G +S E Sbjct: 14 KTPLYLFDGDRLEETYFNMKKVLPDA-FEFFYSVKANPSYGICRILQKCSSGIEVASAGE 72 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117 + L E F + + K + I + ++ D A+ +K Sbjct: 73 LHLALEAGFDNKKILFTGPGKTYSELEFAVDSKILAINAESYKEIMLIDDIAKAKNKIVD 132 Query: 118 IGLRINPSVS-YSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169 +GLRI+P+ SK ++ G + E S+ N+ + + Sbjct: 133 VGLRIHPNFKIESKNPAISMMGTGTQFGVDIDEIPEILKYIKSSKNLNLVCFHVYAGSQI 192 Query: 170 KSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221 A + F I+ + GGG + K Y + F + + Sbjct: 193 FQPDTTLAYFEQTINIFKELIEKNDLHIKVLDFGGGFGVSYDGKNKPYDFEYFGAEINKL 252 Query: 222 SEKYSVQI-----YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-------- 268 KY E G ++ + T V + ++ H Sbjct: 253 YHKYEDFFQGKKLVFESGRLLLAESGVFLTEVQYRKVLHDKVFLITDGGMNHNSLSTFRE 312 Query: 269 --VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + L + + T V G C DI G GD + ++ Y Sbjct: 313 KKIRGNFLMK---ILDNRNEEETVTVAGPLCTPEDILGRNVTLNKADRGDILCIKNTGAY 369 Query: 327 NINRKN-WFNGINMPTIAVKNVDGTIKAIRE 356 + F G P + + + Sbjct: 370 GSSFSPLGFLGHPAPCEVLIYKNNEYYLKKH 400 >gi|328870102|gb|EGG18477.1| group IV decarboxylase [Dictyostelium fasciculatum] Length = 488 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 60/369 (16%), Positives = 115/369 (31%), Gaps = 34/369 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +I+ V A+KC G+ L +S E+ Sbjct: 116 FFVADIATIIKQYQ--KWIKHLPHVTPYYAVKCNPTQGVLKVLEALGTSFDCASRNEIET 173 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 Y K A L N + F+ VS+L K + + + + Sbjct: 174 VLNLGVDPSRIIYANPCKQISALKFARLHNVKMMTFDNVSELEKIEKFFPEAELVLRIAP 233 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S S +F + + V G+ FH + A L+ + Sbjct: 234 DDSKSLMRFGTKFGVHIDDC--SDLLEMAKEMNLKVVGVSFHVGSGCFDASAYDAALEMV 291 Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEA 236 + F + + +GGG +D F ++ +++ I EPG Sbjct: 292 KSVFDMAKTHGMTLNLVDIGGGFTGSDDVM-FGKFTDAIRNKTKELFAPDVRIIAEPGRY 350 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLY-----------------QES 278 + L TV+ + ++ Y Y + + Sbjct: 351 FAAMSHVLAVTVISKRIIKQEDNRQHPRRTSNNLRQYNYYLADGVYGSFNNIQFDHAKPT 410 Query: 279 ATIYP--NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + P + G +C + D+ +KIGD + F+D+ Y + + FNG Sbjct: 411 PCLLKPSHKQPTPCTLFGPTCDSIDVIARDTQIPELKIGDWLYFKDMGAYTMASASSFNG 470 Query: 337 INMPTIAVK 345 P I Sbjct: 471 FVPPPIYYY 479 >gi|74025726|ref|XP_829429.1| ornithine decarboxylase [Trypanosoma brucei TREU927] gi|70834815|gb|EAN80317.1| ornithine decarboxylase [Trypanosoma brucei] Length = 445 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 67/383 (17%), Positives = 118/383 (30%), Gaps = 33/383 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D ++ +T V A+KC W + TL G +S E+ Sbjct: 59 PFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQ 116 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E Y K + + K K+ LRI+ Sbjct: 117 RVRGIGVPPEKIIYANPCKQNSHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 176 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S ++ L+ ++ + +V G+ FH + F+ + + Sbjct: 177 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 236 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234 F + + +GGG T + + K F + I EPG Sbjct: 237 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 296 Query: 235 EAIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLY 275 V + TL V+ V S + D+ + Sbjct: 297 RYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 356 Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + PN Y + V G +C D E ++ +++G+ + FED+ Y + + Sbjct: 357 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 416 Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356 FNG PTI +RE Sbjct: 417 FNGFQSPTIYYVVSGLPDHVVRE 439 >gi|13124043|sp|O50657|DCLO_SELRU RecName: Full=Lysine/ornithine decarboxylase; Short=LDC gi|2897824|dbj|BAA24923.1| lysine/ornithine decarboxylase [Selenomonas ruminantium] gi|28804806|dbj|BAC57940.1| lysine decarboxylase [Selenomonas ruminantium] Length = 393 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 108/362 (29%), Gaps = 22/362 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+ + K+ N AG + A+K + L +S Sbjct: 18 IPTPFLVASLDKVEENYQFMRRHLPRAG--VFYAMKANPTPEILSLLAGLGSHFDVASAG 75 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + HE G Y KD A N F+ S+++K + Sbjct: 76 EMEILHELGVDGSQMIYANPVKDARGLKAAADYNVRRFTFDDPSEIDKMAKAVPGADVLV 135 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 + + + + L + + G+ FH ++ S + Sbjct: 136 RIAVRNNKALVDLNTKFGAPVEEAL--DLLKAAQDAGLHAMGICFHVGSQSLSTAAYEEA 193 Query: 179 LKNIEKEF---GHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQI--Y 230 L + F + + +GGG D + + + + + ++ + Sbjct: 194 LLVARRLFDEAEEMGMHLTDLDIGGGFPVPDAKGLNVDLAAMMEAINKQIDRLFPDTAVW 253 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNT 285 EPG + L T+V+ + + + D+ Y N Sbjct: 254 TEPGRYMCGTAVNLVTSVIGTKTRGEQPWYILDEGIYGCFSGIMYDHWTYPLHCFGKGNK 313 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 P T G SC D+ +KIGD++ ++ Y FNG + + Sbjct: 314 KPSTF--GGPSCDGIDVLYRDFMAPELKIGDKVLVTEMGSYTSVSATRFNGFYLAPTIIF 371 Query: 346 NV 347 Sbjct: 372 ED 373 >gi|1749562|dbj|BAA13839.1| unnamed protein product [Schizosaccharomyces pombe] Length = 363 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 115/366 (31%), Gaps = 30/366 (8%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 ++ D + L + K V+ A+KC + LN++ G +S E+ Sbjct: 1 FVADLNGVYRQL--LRWHAKLPRVQPFYAVKCNPDPKVLALLNKFGTGLDCASKGELEQI 58 Query: 67 HE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125 + Y K ++ + + +K K + ++ LRI+ Sbjct: 59 LGLGVSPDRIVYANPCKAITYVRYAASKGINLMTFDNADELYKVKQHHPNSRLLLRISTD 118 Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185 S S L+ K D +S NV G+ FH + F ++ + Sbjct: 119 DSNSLCRLSLKFGASLDDTGKLLDIAKSLELNVVGVSFHVGSGSYDPSAFLDAIQRSRQV 178 Query: 186 FG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIVT 239 F + + +GGG + ++ + Y + EPG V+ Sbjct: 179 FDQGLERGFNFDLLDIGGGF----MNDSFDGVADLIRSALDTYFDPSIRVISEPGRFFVS 234 Query: 240 NTTTLNTTVLDISENIKNLVIVD-----------SSVEAHVPDY-----LLYQESATIYP 283 ++ TL V+ + ++ + H + Sbjct: 235 SSFTLAVNVIAKRKLDDEEKVMYYVNDGVYGSLNCILFDHQHPVARVLKCGSRFVYNDLV 294 Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 TG + + G +C + D+ +GD I FED Y + + FNG I Sbjct: 295 GTGQHRCFIWGPTCDSLDVIANDAHLPYEPNVGDWIYFEDAGAYTVAAASCFNGFKTSRI 354 Query: 343 AVKNVD 348 + D Sbjct: 355 VYLDTD 360 >gi|114319288|ref|YP_740971.1| Orn/DAP/Arg decarboxylase 2 [Alkalilimnicola ehrlichii MLHE-1] gi|114225682|gb|ABI55481.1| Orn/DAP/Arg decarboxylase 2 [Alkalilimnicola ehrlichii MLHE-1] Length = 411 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 54/376 (14%), Positives = 105/376 (27%), Gaps = 34/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+Y D++ + + G+ L A+K + + +DG +S E Sbjct: 37 GTPFYAYDRRLMTRRVAALRQTLPE-GIALHYAIKANPMPAVVQHMAGQVDGLDVASAGE 95 Query: 63 VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + ++ D E+ A ++ TI + ++L + A+K+ + + Sbjct: 96 LRVALDAGVSAADISFAGPGKTDDELAAAVAAGITINLESATELERLAAIAEKIGHRPHV 155 Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSFL 173 + + K + G + +I + + G + +N Sbjct: 156 AVRVNPDFELKTSGMKMSGGAKPFGVDAEAVPALLKRIAALDVHFRGFHIFSGSQNLRAE 215 Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 +E +++GGG + + E E Sbjct: 216 ALVEAQGLTLDLALRLADDAPGPVEMLNIGGGFGIPYFPGDRRLDLAPVSEQLEARLPAV 275 Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 +I LE G +V V+D + +V + H Sbjct: 276 RERLPGVEIILELGRYLVGEAGIYVAKVVDRKVSRGRTFLVTNGGLHHHLAASGNFGQVI 335 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + T V G C DI + P + GD I Y Sbjct: 336 RKNYPVAVGNRMDASASETVDVVGPLCTPLDILAQQVDLPPAQPGDWIVVYQSGAYGYTA 395 Query: 331 K-NWFNGINMPTIAVK 345 F G P + Sbjct: 396 SPTRFLGHPEPLELLV 411 >gi|162174|gb|AAA30218.1| ornithine decarboxylase [Trypanosoma brucei] gi|4104937|gb|AAD02222.1| ornithine decarboxylase [Trypanosoma brucei gambiense] gi|261335419|emb|CBH18413.1| ornithine decarboxylase, putative [Trypanosoma brucei gambiense DAL972] Length = 445 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 67/383 (17%), Positives = 118/383 (30%), Gaps = 33/383 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D ++ +T V A+KC W + TL G +S E+ Sbjct: 59 PFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQ 116 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E Y K + + K K+ LRI+ Sbjct: 117 RVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 176 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S ++ L+ ++ + +V G+ FH + F+ + + Sbjct: 177 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 236 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234 F + + +GGG T + + K F + I EPG Sbjct: 237 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 296 Query: 235 EAIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLY 275 V + TL V+ V S + D+ + Sbjct: 297 RYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 356 Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + PN Y + V G +C D E ++ +++G+ + FED+ Y + + Sbjct: 357 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 416 Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356 FNG PTI +RE Sbjct: 417 FNGFQSPTIYYVVSGLPDHVVRE 439 >gi|163783584|ref|ZP_02178574.1| ornithine decarboxylase [Hydrogenivirga sp. 128-5-R1-1] gi|159881204|gb|EDP74718.1| ornithine decarboxylase [Hydrogenivirga sp. 128-5-R1-1] Length = 390 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 117/360 (32%), Gaps = 22/360 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP L+D + + Y + A+K + L + G +S Sbjct: 37 VDTPALLMDLEGVKTRFVDVRYHLPEVN--VFYAVKANDHIDILRALAEVGAGFEVASSE 94 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKI 118 E+ E + K + ++ +++K A + + Sbjct: 95 ELGKVLSLGVQPERVISSNPVKPLDFIDYAYGVGVNRFAVDSFPEVDKIARAAPRARVYV 154 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176 L + S + + + ++ + + GL FH + + + Sbjct: 155 RLTVPNEGSEW----PLSRKFGVDVNTAVEILEYAKNRGLVPIGLTFHVGSQCNNLRNWF 210 Query: 177 AMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQ-RLKEFSEKYSV 227 +K + + ++ +++GGGI + + + L+++ Sbjct: 211 IAIKRSAQLWEAARLKGIRLLVLNMGGGIPVRYLQESLSVEDIAYYVRGLLRKYFPTSPY 270 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 ++ +EPG IV + + V+ + +N + +D+ V + + L T G Sbjct: 271 ELQIEPGRGIVGDQGIMVVGVVGTATRGEENWLYIDTGVFNGLAEALGGIRYPTYLKREG 330 Query: 287 P-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 ++ G SC + D+ + F +GDR+ Y FNG P + Sbjct: 331 ELKEWVIGGISCDSMDVVAKRVFLPEPAVGDRLFILSAGAYTTVYGANFNGFPPPKVICL 390 >gi|219853015|ref|YP_002467447.1| Orn/DAP/Arg decarboxylase 2 [Methanosphaerula palustris E1-9c] gi|219547274|gb|ACL17724.1| Orn/DAP/Arg decarboxylase 2 [Methanosphaerula palustris E1-9c] Length = 404 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 64/366 (17%), Positives = 117/366 (31%), Gaps = 29/366 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID +K+ N V++ A+K + + TL +S+ E Sbjct: 40 GTPIFVIDHEKIRQNYREFREHL--PDVQVYFAVKANSNPEIVKTLFDMGCSFDVASMPE 97 Query: 63 VMLGHEKFGG-----------ETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDK 110 M+ +E + Y K E + F+ +L K + Sbjct: 98 FMVVYENIKDLPDKERQEWIWDKIIYANTIKPIETIEALNQYKPLVTFDNSEELKKIRTY 157 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 A + +R+ + S + P + + + GL FH + Sbjct: 158 APHAGLVLRIRVPNTGSMVELSSKFGAEPGEAVDLISEAFAMGLVT--EGLSFHVGSQCT 215 Query: 171 SFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEK 224 +F + L+ +I + +GGG +RL E+ Sbjct: 216 NFDNYVQALELSANIIEEVETRTGQKIRILDIGGGFPVRYHPEVKSFHLLARRLNTEIER 275 Query: 225 YS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--DYLLYQESA 279 +QI EPG +V N TL + V+ + + H + Sbjct: 276 LFPPDMQILAEPGRFLVANACTLVSKVIGKAFRDGKPGYYINDGVYHTYSGQVFDHNTYP 335 Query: 280 TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + G + V G +C A D ++I D + E++ Y+I +FNG Sbjct: 336 VLAFKEGETQISAVFGPTCDAFDTITLSAELPDLEINDLVYSENIGAYSIASSTYFNGFP 395 Query: 339 MPTIAV 344 P + Sbjct: 396 -PATVL 400 >gi|11514289|pdb|1D7K|A Chain A, Crystal Structure Of Human Ornithine Decarboxylase At 2.1 Angstroms Resolution gi|11514290|pdb|1D7K|B Chain B, Crystal Structure Of Human Ornithine Decarboxylase At 2.1 Angstroms Resolution Length = 421 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 66/392 (16%), Positives = 122/392 (31%), Gaps = 41/392 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+ C + + TL G +S E+ L Sbjct: 34 FYVADLGDILK--KHLRWLKALPRVTPFYAVXCNDSKAIVKTLAATGTGFDCASKTEIQL 91 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 92 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 151 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ R ++ + +V G+ FH F + + Sbjct: 152 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 211 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 212 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 271 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 272 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 331 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y++ + G +C D E + +GD + FE++ Y + Sbjct: 332 PLLQKRPKPDERY----YSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 387 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + FNG PTI + +++F D+ Sbjct: 388 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 419 >gi|316932414|ref|YP_004107396.1| Orn/DAP/Arg decarboxylase 2 [Rhodopseudomonas palustris DX-1] gi|315600128|gb|ADU42663.1| Orn/DAP/Arg decarboxylase 2 [Rhodopseudomonas palustris DX-1] Length = 380 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 110/357 (30%), Gaps = 27/357 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + + +N ++ A+K A + L +S+ E+ Sbjct: 21 PCLVVDLEVVRDNFMHFAKAL--PDSRVFYAIKANPAPEVLSLLASLGSCFDCASVQEIQ 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ + A + +++ K A K+ R Sbjct: 79 MALAAGATPDRISFGNTIKKERDIARAYELGIRLFSVDCTAEVEKIARVA--PGSKVFCR 136 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I + +++ L+ + D + G+ FH + + + L Sbjct: 137 ILYDCAGAEWPLSRKFGCDPEMAVDVLDVAKRLGLEAYGISFHVGSQQRKVKAWDRALAM 196 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232 + F + +++GGG + + L++ + +E Sbjct: 197 AAQVFRDCAERGINLSMVNMGGGFPTKYLKEVPPVVQYGRSIFRALRKHFGNQIPETIIE 256 Query: 233 PGEAIVTNTTTLNTTVLDI-----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 PG +V N + T V+ I + + + + A + G Sbjct: 257 PGRGMVGNAGVIETEVVLISKKSDDDETRWVYLDIGKFGGLAETMDESIRYAIKSRHDGA 316 Query: 288 Y--TAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 ++ G +C + D+ E + ++IGD++ E Y FNG Sbjct: 317 EMTPCVLAGPTCDSADVLYEKLPYPLPVTLEIGDKLLIEGTGAYTSTYSAVAFNGFP 373 >gi|325981750|ref|YP_004294152.1| Ornithine decarboxylase [Nitrosomonas sp. AL212] gi|325531269|gb|ADZ25990.1| Ornithine decarboxylase [Nitrosomonas sp. AL212] Length = 391 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 116/351 (33%), Gaps = 17/351 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ L+D + + V A+K + L G +S+ E+ Sbjct: 42 PFLLVDSTIIRRKAQRFIAAMPR--VHPHYAVKANPDARVLSALIDEGVGFEIASIAELD 99 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + Y+ K + + +++ +L K + K K+ LR Sbjct: 100 LLLKLGVPAAEIFYSNPMKSRAYIEYAAAKGVEWYVLDSIEELRKI--VSVKPDAKMYLR 157 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I+ S + LA + + ++ G+ FH + ++ + ++ Sbjct: 158 IDTPNIGSDWPLAGKFGTHLADINEIIHEAVRLKADLAGVTFHVGSQCRNPQNWRVGIER 217 Query: 182 IEKEFGHF---ITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYS--VQIYLEPG 234 +K F +++GGG ++ + + E +++ EPG Sbjct: 218 AKKVFAEMRRVGLNPRLLNVGGGYPVRHIKPIPSIEIIAEVINEAIADLPESIRVMAEPG 277 Query: 235 EAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMV 292 +V+++ V+ + K + D+ + V + + G + Sbjct: 278 RYLVSDSAYFVCRVVGTATRNGKRWMYWDAGMFGGVIEMTEGLRYEILTDREGNNIPWSI 337 Query: 293 CGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 G +C + DI ++ GD I + Y + FNG +P + Sbjct: 338 AGPTCDSVDILMHELMLPNNMQEGDFIYIPNAGAYTTAYASNFNGFPLPDV 388 >gi|168465929|ref|ZP_02699799.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195631146|gb|EDX49706.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 465 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ I +EPG + + L T V + Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 K +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVMMIDKNGETRLIRREDSYEDMVK 461 >gi|73979735|ref|XP_856595.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 6 [Canis familiaris] Length = 467 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 65/389 (16%), Positives = 117/389 (30%), Gaps = 47/389 (12%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K SN + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V++ EPG Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRVIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------------DISENIKNLVIVDSS 264 V + TL ++ +++ + Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDYSAFLDEDESSEQTFMYYVNDGVYGSFNCILY 337 Query: 265 VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 AHV L + + Y+ + G +C D E + +GD + FE++ Sbjct: 338 DHAHVKPLLQKRPKP----DEKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMG 393 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKA 353 Y + + FNG PTI T + Sbjct: 394 AYTVAAASTFNGFQRPTIYYVMSGPTWQL 422 >gi|257456760|ref|ZP_05621944.1| decarboxylase, pyridoxal-dependent family [Treponema vincentii ATCC 35580] gi|257445766|gb|EEV20825.1| decarboxylase, pyridoxal-dependent family [Treponema vincentii ATCC 35580] Length = 395 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 54/376 (14%), Positives = 111/376 (29%), Gaps = 31/376 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP +I+ ++ N A + A+K + L + +S Y Sbjct: 22 LETPCVVINLDRIKKNYLELKNFFSTAD--IYYAVKANPHEEVLKLLIELGANFDIASRY 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + +Y K + A ++ L A K H + Sbjct: 80 ELDKILALGISPDRLSYGNTIKKAKDIAYFYEKGIRLFATDSKEDLKNLAKYAPKSHVYV 139 Query: 119 GLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + + S P + G+ FH + + + Sbjct: 140 RILVENTNSADWPLSRKFGCHPDMAYDLCI--LAKELGLIPYGISFHVGSQQRDIGQWDD 197 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDK------DYPVKDFCQRLKEFSEKYSV 227 + + +++ I++GGG + + + L + Sbjct: 198 AIAKTKYLMSSLEEEEDIELKMINMGGGFPASYVVPTNELSEYASEINRYLDDDFGDERP 257 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATI- 281 +I LEPG ++V N L T V+ +S + + V + I Sbjct: 258 RIILEPGRSMVGNAGVLVTEVITVSRKNNTALQRWVYVDAGVFNGLVETLNESIKYPIIT 317 Query: 282 ---YPNTGPYTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334 + ++ G +C + DI ++ +K GDR+ F Y + F Sbjct: 318 SKDTNCSKRGEVILAGPTCDSMDIMYEKYKYQLPINLKPGDRVYFLSAGAYTATYASVEF 377 Query: 335 NGINMPTIAVKNVDGT 350 NG + + Sbjct: 378 NGFPPLKTYIMKNEKK 393 >gi|322835361|ref|YP_004215387.1| Orn/DAP/Arg decarboxylase 2 [Rahnella sp. Y9602] gi|321170562|gb|ADW76260.1| Orn/DAP/Arg decarboxylase 2 [Rahnella sp. Y9602] Length = 435 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 43/398 (10%), Positives = 101/398 (25%), Gaps = 37/398 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y ++ + + + +LK + LN+ G SL Sbjct: 28 VPTPFYAYSASQIKADFSALKKSLPDE-IHYFYSLKANPNKTLVQLLNREGTGCEVCSLA 86 Query: 62 EVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + E + Y ++ ++ ++ D A + Sbjct: 87 ELETVISQGVPPEDIIFVGPGKYIAELTQCCRIGIKAVVIESIEEIKLLNDIAASMGVIQ 146 Query: 119 GLRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + + + + + + G + ++ + G+ + Sbjct: 147 TIALRINPEFTGEKAKLVMSGKPRQFGIDEQLLPQAFACVAQQENLRLAGIHIYLGTRIL 206 Query: 171 SFL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRL 218 + +L + +++ +GGG D + Sbjct: 207 DWQALAKNTLNILSLAGSLQEIYKVDFDFVDVGGGFGVRYFDKEKPLDIVALGGALAPVI 266 Query: 219 KEFSEKYS-VQIYLEPGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEA 267 + + +K+ +I +E G ++ T V + + N + + + Sbjct: 267 RNYHDKFPRCKIIVELGRYLIARAGIFVTRVNYLKPSRDEWFAVCDGGANCHGSAAGINS 326 Query: 268 HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + V G C DI GE + GD I Y Sbjct: 327 LIRRNFPMA-RLGETRAGTQHRYQVTGPLCTPTDILGENIMLAELHPGDLIGIGHSGAYG 385 Query: 328 INRKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + F P + S Sbjct: 386 ASASPVNFLSFGHPAEILVEKGQAFLIRTADSIETLLA 423 >gi|269928458|ref|YP_003320779.1| diaminopimelate decarboxylase [Sphaerobacter thermophilus DSM 20745] gi|269787815|gb|ACZ39957.1| diaminopimelate decarboxylase [Sphaerobacter thermophilus DSM 20745] Length = 445 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 52/390 (13%), Positives = 113/390 (28%), Gaps = 39/390 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL +L L+ V++ ++K + + L + G +S E Sbjct: 38 GTPCYLYHGGVVLEQLERVRAAV-GPDVEVAYSVKANPSLALTQLLARAGAGAEVASAGE 96 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119 + L E + K + ++ ++ + A+ + +G Sbjct: 97 LHLALAAGVDPERIVFAGPGKTEDELRRAVRAGIFAVNVESLGEIERLARVAEGEGRDVG 156 Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENKS 171 + + + + ++ G D + + GL + + Sbjct: 157 VGLRINPAQPLIGSHMRMGGRPTQFGVDEADLERAVALVESKPRLRLRGLHVYTATQVFD 216 Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + + +E I GGG + + + F + + Sbjct: 217 ADALVEHARNVFDLAARVADAAGRPLEMIDFGGGFGIPYFEHLEPFDLDRFGAGFRPLLD 276 Query: 224 KYSV-------QIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLY 275 + + LE G +V T V+D+ ++ K V+ D + H+ + Sbjct: 277 ERLSDPRLAGARFILELGRYLVAEAGVYLTRVVDVKQSWGKTFVVTDGGMNHHISATGNW 336 Query: 276 -----QESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + + P + G C D+FG + GD I Y Sbjct: 337 GQVFRKPYPILNVSADPAAALEQTDLVGPCCTPLDMFGTDIQMALPQPGDIIGVFLSGAY 396 Query: 327 NINRKNW-FNGINMPTIAVKNVDGTIKAIR 355 + + F P + G + +R Sbjct: 397 GYSVSSLKFLSHPEPAEVLVWQ-GEVHILR 425 >gi|86148471|ref|ZP_01066761.1| carboxynorspermidine decarboxylase [Vibrio sp. MED222] gi|85833768|gb|EAQ51936.1| carboxynorspermidine decarboxylase [Vibrio sp. MED222] Length = 301 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 129/297 (43%), Positives = 184/297 (61%), Gaps = 3/297 (1%) Query: 73 ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFI 132 ETHAY+V Y + ++ V CD +IFN+ SQL ++ + +GLR+NP VSY+ Sbjct: 1 ETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVED-RASLGLRLNPGVSYAGQD 59 Query: 133 LADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ 192 LA+P R FSRLG + +NG+MFH NCENK F +L +I K+FG + + Sbjct: 60 LANPARQFSRLGVQADHIKPEIFDEINGVMFHMNCENKDVDAFIGLLDSISKQFGEHLDK 119 Query: 193 IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252 ++W+S+GGG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T TT L TV+DI Sbjct: 120 LDWVSMGGGVFFTWSGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKTTDLVVTVVDIV 179 Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAGDIFGEFHFEK 310 EN+K IVDS+ EAH D L+Y E A++ G + ++ SCLAGD F E F++ Sbjct: 180 ENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHGYVIGSCSCLAGDQFCEASFDE 239 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 P+KIG ++ D AGY + + NWFNG+ MP+I +G ++ + EF Y D+ +LS Sbjct: 240 PLKIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYCDRSNGEVQKLNEFGYEDFKRSLS 296 >gi|115397981|ref|XP_001214582.1| ornithine decarboxylase [Aspergillus terreus NIH2624] gi|114192773|gb|EAU34473.1| ornithine decarboxylase [Aspergillus terreus NIH2624] Length = 443 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 109/354 (30%), Gaps = 25/354 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + V+ A+KC + + + +G +S E+ L Sbjct: 72 FYVADMGEVYR--QHMRWKMNLGRVRPFYAVKCNPDPEILRLMAKLGNGFDCASKAEIDL 129 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K + + +K KA ++ LRI Sbjct: 130 ALATGVDPARIIYAQPCKTKSYLRYAAQKGVKQMTFDNADELYKIKACFPDAELYLRILT 189 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + + + V G+ FH + F +++ Sbjct: 190 DDSTSLCRLSMKFGASLDVAHQLLELARDLELKVVGVSFHVGSGAEDPSAFLKAVQDARL 249 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F ++ + +GGG + + L + + +I EPG V + Sbjct: 250 VFDQAADLGHELHTLDVGGGFTGETFEKFAGVLSEALDTYFPPHV-RIIAEPGRYYVASA 308 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288 TL V+ + + + ++ D + S I+ + P Sbjct: 309 FTLAANVIARRDVRDPEDPNNDAYMIYLNDGVYGNFSNIIFDHQHPVAQILTCANGPNAA 368 Query: 289 ----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C D+ + + +GD + FE++ Y FNG Sbjct: 369 TSGIAYSIWGPTCDGIDVITQRITLPGLLDVGDWLFFEEMGAYTRCSATRFNGF 422 >gi|126330479|ref|XP_001381469.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 510 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 103/358 (28%), Gaps = 24/358 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + + D L T + V A+KC + + L G +S E+ Sbjct: 29 FMVADLGVLAEQHKTFQQMLPR--VTPFFAVKCNNSSSVLRVLANLGTGFDCASRGELEQ 86 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K ++ + + K ++ LR+ Sbjct: 87 VLRMGIAPTRIIYANTCKQISHLQYAASHGVQLMTFDCEEEIAKIAKFHPTARLVLRLWT 146 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S F L+ + V G FH ++ F+ + + Sbjct: 147 QDSESLFPLSTKFGAPLDQCGHLLTLAKDLGVIVVGACFHVGSGCQTPQSFNKAIADARH 206 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEFSEKYSVQ-----IYLEPGE 235 F + + +GGG P ++ + ++Y + I EPG Sbjct: 207 VFDLGLQIGHPMSLLDIGGGFPGKKNFVPTFEEMAAVINIALDQYFPEGSGVEIIAEPGR 266 Query: 236 AIVTNTTTLNTTVLDISEN--------IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 T T ++ + + L + A + + + Sbjct: 267 FYGTKVCTSALNIIGKKDVVEQGGRKLMYYLNDGFYTSFAAIRREKETRIPHVVKKFNCK 326 Query: 288 ---YTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 Y + + G +C A D G + +GD + FED+ Y + FNG + P Sbjct: 327 PLLYPSTLWGPTCDAFDRLGPTDVLLPELHVGDWLIFEDMGAYTYTISSNFNGFSRPE 384 >gi|149640407|ref|XP_001508498.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 854 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 111/362 (30%), Gaps = 27/362 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + + D +L+ L V A+KC + TL G +S E+ Sbjct: 441 FLVADLGELVRRHRGFLRALPR--VTPFYAVKCNNSPWALQTLKNLGTGFDCASQGELEQ 498 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + ++ K + LRI Sbjct: 499 VLELGVPAARIIYANPCKQTSHIQFAASHGVRLMTFDNEGELTKVAKFHPTASMVLRIKT 558 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L++ + + V G+ FH ++ F +++ + Sbjct: 559 EDSESLAQLSEKFGAPLESCPCLLEAARALGVAVVGVSFHVGSGCQNSQTFRRAIEDAHR 618 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEFSEKYSVQ-----IYLEPGE 235 F ++ + +GGG + P ++ + + +++ + + EPG+ Sbjct: 619 VFEMGRQEGHEMRLLDIGGGFPGNESFVPTFEEMAEVINSSLDRHFPEGSGVELIAEPGK 678 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-------- 287 + ++ E ++ ++ + + + P Sbjct: 679 YYAMSVCRAAVNIIAKREVVEEGGSGSKRFMYYMNNGVYGSFQSFALEKIEPKPIVMKKI 738 Query: 288 ------YTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 Y + G +C D + + +GD + FE++ Y + + FNG P Sbjct: 739 SSELPVYPCSLWGPTCDNLDKITQDDIPLPELDVGDWLMFENMGAYTVTLTSAFNGFPAP 798 Query: 341 TI 342 + Sbjct: 799 PV 800 >gi|291408922|ref|XP_002720724.1| PREDICTED: ornithine decarboxylase 1-like [Oryctolagus cuniculus] Length = 443 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 101/360 (28%), Gaps = 26/360 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ + D L T GV ++KC + + L G +S E+ Sbjct: 66 PFMVADLDVLARRHQTFCQAL--PGVLTFYSVKCNNSPWVLRVLAALGTGFDCASQVEME 123 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 Y K + + S+ K ++ LR+ Sbjct: 124 QVLGLGVAPSRIIYANPCKSISHIQYAARHGVRLLTFDSEEELIKVAQHHPGARLVLRLW 183 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S F L+ V G+ FH ++ ++ + + + Sbjct: 184 TQDSQSIFPLSAKFGASLEACGHLLTSARDLGLAVVGVSFHVGSSCQTPTSYAQAITHCQ 243 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKD------FCQRLKEFSEKYSVQIYLEPG 234 + F + + LGGG + P+ + + F E V++ EPG Sbjct: 244 QVFEMGRGAGHDMSLLDLGGGFPGAEGSQPLFEELVKGIKAALAQTFPEGSGVEVIAEPG 303 Query: 235 EAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 T ++ S + + Sbjct: 304 RFYAEPVFTAAVNIIAKKSVLEPGGRRKFVYYLNDGHYGSFRVFLREPAPRIPIVVKEFR 363 Query: 285 TGP--YTAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + P + + G +C A D +F + +GD + F + Y + + FNG P Sbjct: 364 SEPPLFPCTLYGPTCDAFDRLFVAELQLPELDVGDWLVFPSMGAYTSSMSSTFNGFP-PA 422 >gi|34810213|pdb|1NJJ|A Chain A, Crystal Structure Determination Of T. Brucei Ornithine Decarboxylase Bound To D-Ornithine And To G418 gi|34810214|pdb|1NJJ|B Chain B, Crystal Structure Determination Of T. Brucei Ornithine Decarboxylase Bound To D-Ornithine And To G418 gi|34810215|pdb|1NJJ|C Chain C, Crystal Structure Determination Of T. Brucei Ornithine Decarboxylase Bound To D-Ornithine And To G418 gi|34810216|pdb|1NJJ|D Chain D, Crystal Structure Determination Of T. Brucei Ornithine Decarboxylase Bound To D-Ornithine And To G418 Length = 425 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 67/383 (17%), Positives = 118/383 (30%), Gaps = 33/383 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D ++ +T V A+KC W + TL G +S E+ Sbjct: 39 PFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQ 96 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E Y K + + K K+ LRI+ Sbjct: 97 RVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 156 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S ++ L+ ++ + +V G+ FH + F+ + + Sbjct: 157 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 216 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234 F + + +GGG T + + K F + I EPG Sbjct: 217 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 276 Query: 235 EAIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLY 275 V + TL V+ V S + D+ + Sbjct: 277 RYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 336 Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + PN Y + V G +C D E ++ +++G+ + FED+ Y + + Sbjct: 337 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 396 Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356 FNG PTI +RE Sbjct: 397 FNGFQSPTIYYVVSGLPDHVVRE 419 >gi|39933947|ref|NP_946223.1| ornithine decarboxylase [Rhodopseudomonas palustris CGA009] gi|192289366|ref|YP_001989971.1| ornithine decarboxylase [Rhodopseudomonas palustris TIE-1] gi|39647794|emb|CAE26314.1| putative ornithine decarboxylase [Rhodopseudomonas palustris CGA009] gi|192283115|gb|ACE99495.1| Ornithine decarboxylase [Rhodopseudomonas palustris TIE-1] Length = 380 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 111/355 (31%), Gaps = 23/355 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + + +N ++ A+K A + L +S+ E+ Sbjct: 21 PCLVVDLEVVRDNFMHFAKAL--PDSRVFYAIKANPAPEVLSLLASLGSCFDCASVQEIQ 78 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + ++ K A +F+ K K+ RI Sbjct: 79 MALAAGATPDRISFGNTIKKERDIARAYELGIRLFSVDCTPEVEKVARAAPGSKVFCRIL 138 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + +++ L+ + D + G+ FH + + + L Sbjct: 139 YDCAGAEWPLSRKFGCDPEMAVDVLDNAKRLGLEAYGISFHVGSQQRKVKAWDRALAMAA 198 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPG 234 + F + +++GGG + + L++ + +EPG Sbjct: 199 QVFRDCAERGISLSMVNMGGGFPTKYLKEVPPVVQYGRSIFRALRKHFGNQIPETIIEPG 258 Query: 235 EAIVTNTTTLNTTVLDI-----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY- 288 +V N + T V+ I ++++ + + A + G Sbjct: 259 RGMVGNAGVIETEVVLISKKSDEDDVRWVYLDIGKFGGLAETMDESIRYAIKSRHDGAEM 318 Query: 289 -TAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 ++ G +C + D+ E + ++IGD++ E Y + FNG Sbjct: 319 TPCVLAGPTCDSADVLYEKMPYPLPVTLEIGDKLLIEGTGAYTSTYSSVAFNGFP 373 >gi|150021213|ref|YP_001306567.1| Orn/DAP/Arg decarboxylase 2 [Thermosipho melanesiensis BI429] gi|149793734|gb|ABR31182.1| Orn/DAP/Arg decarboxylase 2 [Thermosipho melanesiensis BI429] Length = 386 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 116/358 (32%), Gaps = 18/358 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D + N + + +N+ ++ A+K + + L +S E Sbjct: 18 GTPVLVMDLNIVKANYEKLIDNVRNS--RVYYAVKANSHIEILKLLRDLGSYFDVASRPE 75 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + E ++ K + + N ++ ++ K D A + Sbjct: 76 IEKLLSIGVEPERMSFGNTIKKTKDISFAYNNGIRMFAVDSEMEIEKIADNAPGSDIYVR 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + N + + L K N G+ FH +N + + + Sbjct: 136 ISTNGMEDDADWPLTRKFGTSVDHAIKLVKYAVDLELNPIGVSFHVGSQNYNPDNWRVAI 195 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKY---SVQIYL 231 + + F + ++ GGG+ V++ + + + Y + + L Sbjct: 196 REVSVVFEEARKMGIDMYMVNTGGGMPVKYSRNIPSVEEISEVINKAIVDYIGENTLVVL 255 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL----YQESATIYPNTGP 287 EPG ++V + + T+V+ S+ + + + H + Y+ Sbjct: 256 EPGRSMVGSAGAMVTSVILRSKKGEENWVYTDAGIFHGLTETIQNIRYEVEVIGRELEEK 315 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 ++ G +C + D+ V I D I + Y FNGI P + Sbjct: 316 GKFVLAGPTCDSVDVMYYDIELAKNVTIDDLIVLYNTGAYTTEYSTNFNGIEPPKVVF 373 >gi|114568958|ref|YP_755638.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Maricaulis maris MCS10] gi|114339420|gb|ABI64700.1| aspartate kinase [Maricaulis maris MCS10] Length = 857 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 110/359 (30%), Gaps = 25/359 (6%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D + + ++ + A+K M T + G S+ EVM Sbjct: 504 YVYDLETVKTRASAVAGLKGLD--RGWYAMKANGHPDMIRTAVEAGLGVECVSINEVMAA 561 Query: 67 HEKFGG---ETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + + + E L + + + L + + +KI LRI Sbjct: 562 RKAVPDLPVDRILFTPNFAPRAEYAQALELGIHLTLDGLHPLRAWPEI--FSGRKITLRI 619 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLCFS 176 NP P ++ G + +E+ +NGL H+ + Sbjct: 620 NPQRPEGHHKHVRTAGPEAKFGLHADELVEARDLAKKAGAIINGLHVHSGSGISDPDHWR 679 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----VQIYL 231 + + + +E + LGGG+ + + L + Q+++ Sbjct: 680 RVG-LFLVDTARDMPDVEILDLGGGLSVDEASGVRRIDMDALDQVLTDLKTAHPKYQLWI 738 Query: 232 EPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHVPDYLLYQESATI----YPNTG 286 EPG I + L V + V +++ + + + L + + Sbjct: 739 EPGRYISAESGVLLARVTQLKHTPDARFVGINTGMNSLIRPALYGARHEIVNLTRLDESP 798 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 Y A + G C D G + GD I + Y + +N AV Sbjct: 799 AYVADIVGPICETADRLGAQRLMPETEEGDIILIANGGAYGRVMASSYNMREPAGEAVI 857 >gi|217977341|ref|YP_002361488.1| Orn/DAP/Arg decarboxylase 2 [Methylocella silvestris BL2] gi|217502717|gb|ACK50126.1| Orn/DAP/Arg decarboxylase 2 [Methylocella silvestris BL2] Length = 376 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 107/357 (29%), Gaps = 27/357 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ A+K + + L + ++S+ EV Sbjct: 17 PCLVLDLDVVRENYVSFASAM--PDTRVYYAVKANPDPRVLELLAKLGSCFDTASVVEVE 74 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ + A + +++ K A L Sbjct: 75 AALASGATADRISFGNTIKKERDIKRAYELGVRLFAVDCEAEVEKIARAAPGSKVFCRLL 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +++ L+ L + + GL FH + ++ + LK Sbjct: 135 --CDGKGAEWPLSRKFGCDVDLAPRVLEHAHRLGLVAYGLSFHVGSQQRNPAMWDGALKA 192 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 F G ++ ++LGGG Q L++ + + +E Sbjct: 193 ASAIFNDLGERGIALQMVNLGGGFPTRYLKEVPAVRAYAQSIMQSLRKHFGNHIPETIIE 252 Query: 233 PGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 PG +V N + V+ IS + + G Sbjct: 253 PGRGMVGNAGVIEAEVVLISRKSDDDVVKWVYLDIGKFNGLAETMDEMIRYPIRTSFDGD 312 Query: 288 YT--AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 T ++ G SC + D+ E +H ++IG ++ E Y + FNG Sbjct: 313 ETEPCVLAGPSCDSVDVLYEKDPYHLPVSLEIGAKVLIEGTGAYTTTYSSVGFNGFP 369 >gi|6573538|pdb|1QU4|A Chain A, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase gi|6573539|pdb|1QU4|B Chain B, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase gi|6573540|pdb|1QU4|C Chain C, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase gi|6573541|pdb|1QU4|D Chain D, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase gi|11513499|pdb|1F3T|A Chain A, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase (Odc) Complexed With Putrescine, Odc's Reaction Product. gi|11513500|pdb|1F3T|B Chain B, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase (Odc) Complexed With Putrescine, Odc's Reaction Product. gi|11513501|pdb|1F3T|C Chain C, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase (Odc) Complexed With Putrescine, Odc's Reaction Product. gi|11513502|pdb|1F3T|D Chain D, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase (Odc) Complexed With Putrescine, Odc's Reaction Product Length = 425 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 67/383 (17%), Positives = 118/383 (30%), Gaps = 33/383 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D ++ +T V A+KC W + TL G +S E+ Sbjct: 39 PFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQ 96 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E Y K + + K K+ LRI+ Sbjct: 97 RVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 156 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S ++ L+ ++ + +V G+ FH + F+ + + Sbjct: 157 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 216 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234 F + + +GGG T + + K F + I EPG Sbjct: 217 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 276 Query: 235 EAIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLY 275 V + TL V+ V S + D+ + Sbjct: 277 RYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 336 Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + PN Y + V G +C D E ++ +++G+ + FED+ Y + + Sbjct: 337 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 396 Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356 FNG PTI +RE Sbjct: 397 FNGFQSPTIYYVVSGLPDHVVRE 419 >gi|7404357|sp|P07805|DCOR_TRYBB RecName: Full=Ornithine decarboxylase; Short=ODC gi|162175|gb|AAA30219.1| ornithine decarboxylase [Trypanosoma brucei] Length = 423 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 67/383 (17%), Positives = 118/383 (30%), Gaps = 33/383 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D ++ +T V A+KC W + TL G +S E+ Sbjct: 37 PFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQ 94 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E Y K + + K K+ LRI+ Sbjct: 95 RVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 154 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S ++ L+ ++ + +V G+ FH + F+ + + Sbjct: 155 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 214 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234 F + + +GGG T + + K F + I EPG Sbjct: 215 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 274 Query: 235 EAIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLY 275 V + TL V+ V S + D+ + Sbjct: 275 RYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 334 Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + PN Y + V G +C D E ++ +++G+ + FED+ Y + + Sbjct: 335 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 394 Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356 FNG PTI +RE Sbjct: 395 FNGFQSPTIYYVVSGLPDHVVRE 417 >gi|56553801|pdb|1SZR|C Chain C, A Dimer Interface Mutant Of Ornithine Decarboxylase Reveals Structure Of Gem Diamine Intermediate gi|56553802|pdb|1SZR|D Chain D, A Dimer Interface Mutant Of Ornithine Decarboxylase Reveals Structure Of Gem Diamine Intermediate gi|56553803|pdb|1SZR|A Chain A, A Dimer Interface Mutant Of Ornithine Decarboxylase Reveals Structure Of Gem Diamine Intermediate gi|56553804|pdb|1SZR|B Chain B, A Dimer Interface Mutant Of Ornithine Decarboxylase Reveals Structure Of Gem Diamine Intermediate Length = 425 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 68/383 (17%), Positives = 119/383 (31%), Gaps = 33/383 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D ++ +T V A+KC W + TL G +S E+ Sbjct: 39 PFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQ 96 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E Y K + + K K+ LRI+ Sbjct: 97 RVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 156 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S ++ L+ ++ + +V G+ FH + F+ + + Sbjct: 157 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 216 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234 F + + +GGG T + + K F + I EPG Sbjct: 217 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 276 Query: 235 EAIVTNTTTLNTTVLDI-------------------SENIKNLVIVDSSVEAHVPDYLLY 275 V + TL V+ S V S + D+ + Sbjct: 277 RYYVASAFTLAVNVIAKAVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 336 Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + PN Y + V G +C D E ++ +++G+ + FED+ Y + + Sbjct: 337 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 396 Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356 FNG PTI +RE Sbjct: 397 FNGFQSPTIYYVVSGLPDHVVRE 419 >gi|288957461|ref|YP_003447802.1| ornithine decarboxylase [Azospirillum sp. B510] gi|288909769|dbj|BAI71258.1| ornithine decarboxylase [Azospirillum sp. B510] Length = 382 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 113/366 (30%), Gaps = 37/366 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP +ID + N + ++ A+K A + L + +S+ E Sbjct: 15 QTPCLVIDLDVVEQNYNDLHDAL--PDARIFYAVKANPAAEILGLLARLGSAFDCASVPE 72 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + ++ + A F++ +L K + A Sbjct: 73 IQMALAAGATPDRISFGNTIKKEGDIRRAYELGVRLFAFDSEPELEKIERAAPGARVFCR 132 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + S + L +++ +V G+ FH + K + + Sbjct: 133 ILT----SGEGAEWPLSRKFGCDLAMARALLLKARDMDVQPYGVSFHVGSQQKDLMQWDH 188 Query: 178 MLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQ 228 + + + F + I+LGGG + + L+ + + Sbjct: 189 AIFQVAQLFRELEVLGVDLGMINLGGGFPTRYRTDVPECTAYGQAIFDSLRTHFGNHLPE 248 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQ---- 276 +EPG +V + + + V+ +S ++ + + + Y Sbjct: 249 TIVEPGRGMVGSAGIIESEVVLVSRKSAEDAKRWVYLDIGKFGGLAETMDEAIQYPIEVL 308 Query: 277 -ESATIYPNTGPYTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + A + ++ G +C + D+ E+ +K GDR+ Y Sbjct: 309 GDEAIDGQDDDREAVILAGPTCDSADVLYERAEYRMPMGLKAGDRVRIHATGAYTTTYSA 368 Query: 333 W-FNGI 337 FNG Sbjct: 369 VCFNGF 374 >gi|159036153|ref|YP_001535406.1| Orn/DAP/Arg decarboxylase 2 [Salinispora arenicola CNS-205] gi|157914988|gb|ABV96415.1| Orn/DAP/Arg decarboxylase 2 [Salinispora arenicola CNS-205] Length = 417 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 53/394 (13%), Positives = 100/394 (25%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + + + + +LK + L G SSL E Sbjct: 12 GTPLFVYEADTVAAQYTGLRQRLH-PAMDIFYSLKANPNLALCGHLRSLGAGAEVSSLLE 70 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + E + K E + II + +L D A++ + Sbjct: 71 LTTAREAGVPPGDIVFPGPGKSREEITACLDAQIYAIICESFEELELVNDLARERGVRAR 130 Query: 120 LRINPSVS-YSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENKS-- 171 + + + + K + G + V G+ + Sbjct: 131 VALRVNPAFAVKGSGLTMGGKPRQFGIDEAHLFALPGLRLAHLRVVGVHVYLGTRILDET 190 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---------KE 220 +L+ E+ H +E++ +GGG+ D +RL Sbjct: 191 VIAENTRRILELAERLAAHLDFPLEFVDVGGGLGVAYFDGERDLAVERLTDLVNPVVADF 250 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQE-- 277 ++ +E G +V T V + ++ V H+ + Sbjct: 251 HDRHRDTRLIMELGRYLVAPAGTYLIRVRYVKSSMGERFAVTDGGTHQHMAAVGIGSFVK 310 Query: 278 -----SATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 P GP V G C D ++ GD + Y + Sbjct: 311 RDFPLRLLGRPTDGPLVRWTVTGPLCTPNDTLVRAAELPDLRRGDLLGVLRSGAYGPSAS 370 Query: 332 NW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 F G P + D Sbjct: 371 PTLFLGHGHPAEVLVRNGVGCLVRHRDQVADLLR 404 >gi|289209688|ref|YP_003461754.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Thioalkalivibrio sp. K90mix] gi|288945319|gb|ADC73018.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Thioalkalivibrio sp. K90mix] Length = 416 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 47/375 (12%), Positives = 100/375 (26%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y D+Q + + + + A+K + + +DG +S E+ Sbjct: 43 TPFYAYDRQVMTRRVQALRQALPR-DLSIHYAIKANPMPAVVGHMASLVDGLDVASGREL 101 Query: 64 MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ E++ ++ TI + ++L + A++ + + Sbjct: 102 QIALDAGVSAADISFAGPGKSPAELEMAVAAGITIHLESDTELTRVAAIAERTGRTPCVA 161 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 + + K + G + I + G +N Sbjct: 162 VRVNPDFELKTSGMKMSGGPKVFGVDAERVPEMLGRIGELGLHFRGFHIFAGSQNLRAES 221 Query: 175 FSAML----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225 + H +E +++GGG + E E+ Sbjct: 222 LVEAQGLTLDLALRLADHAPGSVETLNIGGGFGIPYFPGDQPLTLGPIAEQLERRLPEVR 281 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272 ++ LE G +V VLD + + +V + H Sbjct: 282 ARMPQAEVILELGRYLVGEAGVYVAEVLDRKVSRGRVFLVTNGGLHHHLAASGNFGQVIR 341 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + G C D+ G+ +IGD + Y Sbjct: 342 KNYPVAIGNRMGEAASEVVDIVGPLCTPLDVLGQQVELPRAEIGDLVVVFQSGAYGYTAS 401 Query: 332 NW-FNGINMPTIAVK 345 F P + Sbjct: 402 PRGFLSHPEPAEILV 416 >gi|182412516|ref|YP_001817582.1| Orn/DAP/Arg decarboxylase 2 [Opitutus terrae PB90-1] gi|177839730|gb|ACB73982.1| Orn/DAP/Arg decarboxylase 2 [Opitutus terrae PB90-1] Length = 379 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 57/372 (15%), Positives = 117/372 (31%), Gaps = 34/372 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D L T +++ A+K + TL Q +S+ E Sbjct: 15 GTPLFIVDHDALRKAYRTFRKHLPR--IQVYYAVKANPDPAIVRTLFQEGASFDVASMPE 72 Query: 63 VMLGHEKFGG------------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 M+ HE + N ++ + + F+ + ++ K K Sbjct: 73 FMIVHENIKRLPAKERQEWIWDKIIYANPTKPTETLEELNQYKPLVTFDNLEEIQKIKQH 132 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK---NVNGLMFHNNC 167 A + L++ + + + + F + D I K V G+ FH Sbjct: 133 APNAGLVLRLKV-----PNTGAMVELSSKFGASPGEAVDLILEADKAGLGVEGISFHVGS 187 Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKD--YPVKDFCQRLKEF 221 + +F + L F ++ + +GGG D P + + + Sbjct: 188 QTTNFENYVQALNLSANIFQEARERGYTKMNLLDIGGGFPAPYDDTVKPFEMLAKVINTE 247 Query: 222 SEKYSVQIYL---EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD--YLLYQ 276 ++ + EPG + + T V+ + + H + Sbjct: 248 LDRLFPKEIQILAEPGRFLAAVSGTSVAKVIGKAVRDGKTCYYINDGVYHTYSGVIFDHC 307 Query: 277 ESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + GP + V G +C A D+ ++ GD + ++ Y+ +FN Sbjct: 308 KYPVKAFKKGPTSLCSVFGPTCDALDVVSMAENLPDLQRGDFVYSVNIGAYSHASATYFN 367 Query: 336 GINMPTIAVKNV 347 G + N Sbjct: 368 GFPPAKVVHVNQ 379 >gi|114705385|ref|ZP_01438293.1| ornithine decarboxylase [Fulvimarina pelagi HTCC2506] gi|114540170|gb|EAU43290.1| ornithine decarboxylase [Fulvimarina pelagi HTCC2506] Length = 377 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 45/363 (12%), Positives = 106/363 (29%), Gaps = 26/363 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ + A+K A + L +S+ E+ Sbjct: 18 PCLVVDLDVVKENFNAFRKALPDSA--IFYAVKANPAPEILKLLASLGSNFDCASVAEIK 75 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + G + ++ K A +F K ++ R+ Sbjct: 76 MALAAGVGPDRISFGNTIKKERDVAAADALGVSLFAVDCIEEVEKVARAAPAARVFCRVL 135 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 +++ L+ + G+ FH + + A + + + Sbjct: 136 TDGEGAEWPLSRKFGCMPAMAIDVLTHARDLGLRATGISFHVGSQQTDTNAWDAAIGDAK 195 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234 F + +++GGG + LK+ + +EPG Sbjct: 196 FVFEALERRGINLTLVNMGGGFPTRYLKDVPTAQAYGHAIFESLKKHFGNRLPETIIEPG 255 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTG 286 +V + + V+ +S+ ++ + + + Y Sbjct: 256 RGMVGDAGVIKAEVVLVSKKSDTDENRWVYLDIGKFGGLAETMDEAIRYPIRTRH-DGGA 314 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI-NMPT 341 ++ G +C + D+ E + IGD + E Y + FNG + + Sbjct: 315 TEPCVLAGPTCDSADVLYEKKPYPLPLALTIGDEVLIEGTGAYTTTYASVAFNGFEPLAS 374 Query: 342 IAV 344 + Sbjct: 375 YVI 377 >gi|269140449|ref|YP_003297150.1| putative diaminopimelate decarboxylase [Edwardsiella tarda EIB202] gi|267986110|gb|ACY85939.1| putative diaminopimelate decarboxylase [Edwardsiella tarda EIB202] gi|304560241|gb|ADM42905.1| Diaminopimelate decarboxylase [Edwardsiella tarda FL6-60] Length = 465 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 75/418 (17%), Positives = 140/418 (33%), Gaps = 57/418 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ + K A K + G+ + ++S Y Sbjct: 45 GTPFYVFSEAEIVRNIREIEQAFSAHPNTKTFFASKTCSVMGVLQAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N + A+ ++ I +++ +L+ +++L K Sbjct: 105 EVRKCLEVGFRGDQIVFNGVVKKPEDLEYAIANDLYLINVDSLYELDHIDAISRRLKKTA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY---------------PV 211 F+ + + E + I++GGGI K Sbjct: 225 EAEPFAKATRVLVDESRRLEQVLGITFDLINVGGGIPVPYKYDEENGDPLKDNMYAGITA 284 Query: 212 KDFCQRLKEFSEKYSV--QIYLEPGEAIVTNTTTLNTTV----------------LDISE 253 +DF + K+ QI +EPG + + L T V + Sbjct: 285 QDFADAVISEVHKWRTDVQICIEPGRKVTGSAAVLLTEVACEKRKTNYDVDGNVECHVEW 344 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307 + S H D+ Y +A+ + G C GD F EF Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRITEAHDRYIKLAGPLCDGGDYFHVGVKGEEFL 403 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 IGD ++F D Y+I + +N + + + G + IR SY D Sbjct: 404 MPHDTAIGDVVAFLDAGAYSIESQTVYNNRPRTAVVMIDRQGNDRLIRREDSYEDMVK 461 >gi|108760390|ref|YP_630578.1| pyridoxal-dependent decarboxylase [Myxococcus xanthus DK 1622] gi|108464270|gb|ABF89455.1| decarboxylase, pyridoxal-dependent [Myxococcus xanthus DK 1622] Length = 480 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 60/405 (14%), Positives = 114/405 (28%), Gaps = 45/405 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P +++ L N + L + G ++ + K G+ L+ G S Sbjct: 64 GSPLHVVHMAALRRNAERFLAVPPGRTGGCEVYYSYKTNPVPGVLSFLHGLGVGAEVISA 123 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 YE+ L + E YN K +A+ + N ++ F A +L ++ Sbjct: 124 YEMWLALKLGVPPERIVYNGPVKSEASVREAISRGIQLLAANHAEEIAVFARLAAELDRR 183 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK----SFL 173 + + + + + S+ +V GL H + Sbjct: 184 PRVAVRVTTNSGWSAQFGTPIAGGAALRAYQQARGSKHLDVVGLHAHRGETIRTEGDFTA 243 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGI-------------------------HFTDKD 208 ++L + +E + LGG + Sbjct: 244 FVESVLDFTDTLHQELGLDLEVLDLGGSLNTPTVEHIAERDWRLNLTFFRDVPAPDPAAS 303 Query: 209 YPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV 261 + + E E + +I+LEPG A+ +T L V + V Sbjct: 304 LSIDRYVALAVEMVETHYARRGRQRPRIFLEPGRAMTGDTQLLLGRVHALKAGEDRTWAV 363 Query: 262 DSSVEAH---VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 + H V + V G C GD +++GD + Sbjct: 364 LDAGINHAECVRNEYHQLFHVNRPDAPADKVYTVVGPICTPGDTLYHAKRLPDLRVGDTL 423 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 + D Y + F P I R +++D Sbjct: 424 AIMDAGAYFVPFATSF-SYPQPAIVALEDGKERLLRRAETFDDLV 467 >gi|312377938|gb|EFR24644.1| hypothetical protein AND_10625 [Anopheles darlingi] Length = 401 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 116/363 (31%), Gaps = 25/363 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++ + K V A+KC + TL +S E+ Sbjct: 36 PFYVMDIGDIVRKHRQWIE--KMPRVVPHYAVKCNDNEVVCGTLAALGASFDCASKGEIA 93 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + K + T+ +++ ++L+K K I +R Sbjct: 94 KILGLGVAPERIIFANPMKPASHLRYASSNGVKTMTYDSDTELHKIKQYCPDAKLVIRIR 153 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAM 178 + P K S +V G+ FH F + + Sbjct: 154 CEAEKAQCPLGKKFGCDPVEEAPRLIK-IARSLGLDVIGVSFHVGSGCADFPIYYKAISY 212 Query: 179 LKNIEKEFGHFITQIEWISLGGGIH----FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 ++ + + +GGG + + + F +K +V++ EPG Sbjct: 213 AHDLFEYAAQLGYTFNLLDIGGGFPGDTGTSIDEVSTIVNAALEQFFPDKAAVRVISEPG 272 Query: 235 EAIVTNTTTLNTTVLDIS------------ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 V++ TL T V V +S + D+ + + Sbjct: 273 RYYVSSAFTLVTNVQSKRICLNARTGAIDRMMYYLNDGVYASFNCILYDHQIPRPKLIGG 332 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 Y + + G +C A D E ++I D + FE++ Y I + FNG +P I Sbjct: 333 QTGKQYNSTIWGPTCDALDQLIETIALPELQIDDWVVFENMGAYTIPVASPFNGFELPKI 392 Query: 343 AVK 345 Sbjct: 393 YCY 395 >gi|117621391|ref|YP_855811.1| ornithine decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562798|gb|ABK39746.1| ornithine decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 383 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 111/361 (30%), Gaps = 16/361 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P L+DK + V+L ALK + L + ++ E Sbjct: 18 GSPLLLLDKAAVRKQYRALAAAL--PDVRLHYALKPLPHEAVVSVLKEEGACFDLATNGE 75 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V L + + K +F + L K K K+ LR Sbjct: 76 VDLVRSQGVRPGRCIHTHPIKRDSDIRYALEYGCTVFVYDNPLELEKFIPYKDEVKLLLR 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 ++ +K L+ ++ V GL FH + + Sbjct: 136 VSFPNPETKVDLSKKFGCTPEQALPLLQLAHAKGIKVMGLSFHVGSQVPHARRHVQAIDA 195 Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEFSEKYSVQI--YLEPG 234 + + + +GGG + ++ + FC ++E K + EPG Sbjct: 196 CREIMEQAWELGLKPWVLDIGGGFPVDYEGGEFDIDGFCAPIREALAKLPATVQKIAEPG 255 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYT 289 I T ++V+ + + S + D++ Y S + + Sbjct: 256 RFISAPAMTSVSSVMGKAHRGDKIWYYLDDGLYGSYNGQLYDHVTYPVSTPLARGE-LHN 314 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 +++ G +C + D+ + + IG+ + + Y + FN +I + + Sbjct: 315 SVLSGPTCDSVDVIRDGIMLPDLAIGELVVGRVMGAYTWASASTFNFFPKASILILDSSQ 374 Query: 350 T 350 Sbjct: 375 K 375 >gi|291533520|emb|CBL06633.1| Diaminopimelate decarboxylase [Megamonas hypermegale ART12/1] Length = 372 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 122/357 (34%), Gaps = 18/357 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP +I + + N + + +K+ A+K +A + + L + +S E+ Sbjct: 20 TPLEVISLEHIEENYNLL--CKHIPRLKVFYAIKANSAKCILEKLIKLGSNFDVASAGEI 77 Query: 64 ML-GHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 L GE Y K + I+A F++ ++++K K ++ Sbjct: 78 RLLSKMGVSGEKMIYANPVKTIEGLIEASKVGIKRFTFDSENEIDKIKKYV--PDAEVLA 135 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+ S + L + ++ NG+ FH + S + Sbjct: 136 RVKIKQSDAIVNLNIKFGADETKILDLLNYAKANGLKANGICFHVGSQVLSTKSYERAFS 195 Query: 181 NIE---KEFGHFITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPG 234 I+++ +GGG+ DKD + + + + + +++ EPG Sbjct: 196 LARGLIDRLKASGLDIKYMDIGGGLPVACLDKDVDAEKIMKSINDCLADFEDVEVWAEPG 255 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYT 289 I + + T+++ + S + D+ Y + + Sbjct: 256 RYICGSAVNVITSIIGKQMRDEKQWYYIDDGIYGSFSGILFDHWDYDIISLKDEDNTYEK 315 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 A + G SC + DI + + + GD + + Y+ FNG ++P Sbjct: 316 ATIAGPSCDSLDIVKKEMYCPKLDEGDLLIALNAGAYSKVSATTFNGFSLPKTVALE 372 >gi|260654439|ref|ZP_05859929.1| lysine/ornithine decarboxylase [Jonquetella anthropi E3_33 E1] gi|260631072|gb|EEX49266.1| lysine/ornithine decarboxylase [Jonquetella anthropi E3_33 E1] Length = 410 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 114/366 (31%), Gaps = 33/366 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P ++ ++ N T VKL A+K A + T G +++ E Sbjct: 52 GSPLVVLSLKQAEQNYRTLSDWLNR--VKLHYAMKSNPAEPLLKTFADLGSGFDVATIGE 109 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + Y K A +++ +++ K A + Sbjct: 110 IKTLLQLGVDPSRLIYANPTKPENWIAQAWKLGVTRFTYDSPAEVGKI--AANAPGASVW 167 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LR+ + + L +S+ +V GL FH + + + L Sbjct: 168 LRVRIANPGALVNLNSKFGASQADALDLLQLAKSKGLDVAGLSFHVGSQTRDSGPYLNSL 227 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYL--E 232 + F + + +GGG + Y + ++++ E + L E Sbjct: 228 AVCRRIFNEAAEMGVPLRSLDIGGGFPIVELGYDIDQETMDSQIRDELEDLFPETELLAE 287 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT--- 289 PG A+ T L T+V+ + D +Y + I + + Sbjct: 288 PGRALCGTTANLITSVIGKQVRDGQDWY--------ILDDGIYGTFSGILFDRWDFELLS 339 Query: 290 --------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + G SC + D+ +++GDR+ Y FNG ++ Sbjct: 340 AKTGPLYLSTFAGPSCDSLDVLFRDRSTPELEVGDRLVVPACGAYTSASATTFNGFSLTP 399 Query: 342 IAVKNV 347 I + Sbjct: 400 IVIWEE 405 >gi|330892355|gb|EGH25016.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. mori str. 301020] Length = 376 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 57/368 (15%), Positives = 94/368 (25%), Gaps = 30/368 (8%) Query: 29 GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFGGETHAYNVAY-KDCEI 86 K A+K + L + G SS E+ L G + D E Sbjct: 7 NFKNFFAVKATPNPRIMQILKEEGMGMDCSSAAELELCERLGIRGRDIMFTSNNTPDEEF 66 Query: 87 DAVLSNCDTIIFNTVSQLNKFKDKAQKLH-KKIGLRINPSVSYSKFILADPNRPFSRLGE 145 S + + + + K N S + + S+ G Sbjct: 67 VKSCSMGAILNIDDYEHITRLDVLEIKPELVSFRYLPNSSGEERQGNQIIGSPKESKFGI 126 Query: 146 KCKDKIE----SEIKNVNGLMFHNNCENK------SFLCFSAMLKNIEKEFGHFITQIEW 195 + +NV H + M ++ H IE+ Sbjct: 127 TDDRIFHCFAAMKKRNVKRFGLHTMLASNERNAAFFIETARIMFDLAKRISEHLSIDIEF 186 Query: 196 ISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY-----------LEPGEAIVTNTTTL 244 I+LGGG+ + + + Q + +E G I L Sbjct: 187 INLGGGLGIPQHPTDSEIDIDLVGSEVGRLYTQYFHSEDGITPDIYMENGRYITGPAGVL 246 Query: 245 NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY--TAMVCGRSCLAGDI 302 T V ++ K V VD+S+ + L N V G C D Sbjct: 247 LTKVRHVTSKHKRFVGVDASMADFMRPALYKDYHHVTVLNDSKELIKCDVTGSLCENNDK 306 Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI----KAIREFS 358 F D + D + + +NG + G R Sbjct: 307 FAIDRELPRCSRDDLLIIHDTGAHGYSMGFSYNGKTKSPEVLMRSKGEHFELELIRRREQ 366 Query: 359 YNDYYNNL 366 +D + L Sbjct: 367 TSDLFATL 374 >gi|209154586|gb|ACI33525.1| Ornithine decarboxylase 1 [Salmo salar] Length = 456 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 113/383 (29%), Gaps = 34/383 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L + R V A+KC + + TL G +S E+ + Sbjct: 38 FYVCDLSDVLK--KHMRWARAMPRVTPFYAVKCNDSRTVVTTLASLGAGFDCASKTEIQI 95 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K S + S + K + K+ LRI Sbjct: 96 VQSLGVDASRIIYANPCKQVSQIKYASAHGVQMMTFDSDVELMKVARCHDNAKLVLRIAT 155 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + NV G+ FH +S + + Sbjct: 156 DDSKAVCQLSVKFGATMKACRGLLERAKELGLNVIGVSFHVGSGCTDPDTYSQAISDARC 215 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F ++I EPG Sbjct: 216 VFDMGAEVGFNMTLLDIGGGFPGSEDTKLKFEEITAVINPALDKYFPADSGIRIIAEPGR 275 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYL-----------LYQESA 279 V + TL V+ + D + + Sbjct: 276 YYVASAYTLAVNVIAKKVIMNEQSASDEDDDWTSDRTLMYYVNDGVYGSFNCILYDHAHP 335 Query: 280 TIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + P Y + G +C D E +++G+ + FE++ Y + + Sbjct: 336 LPTLHKKPKPDERMYPCSIWGPTCDGLDRIAEVCTLPDMQVGEWLLFENMGAYTVAASST 395 Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356 FNG P I + I++ Sbjct: 396 FNGFQKPDIYYIMSRTAWQCIQQ 418 >gi|297617721|ref|YP_003702880.1| ornithine decarboxylase [Syntrophothermus lipocalidus DSM 12680] gi|297145558|gb|ADI02315.1| Ornithine decarboxylase [Syntrophothermus lipocalidus DSM 12680] Length = 369 Score = 163 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 117/357 (32%), Gaps = 17/357 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ ++++ GVK+ A+K A + T+ ++ D S E Sbjct: 17 GTPLMVVSRREIGEKFAILNDYL--PGVKMYYAVKANAHPDVLKTVKEFTDRFDICSPQE 74 Query: 63 VMLGHE-KFGGE--THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 ++ E H V + AV +F+ +L KFK ++ + Sbjct: 75 ILAAKSIGVQSENMIHTNPVKKPEDIRFAVEQGVRWFVFDNEYELEKFKPYGSDVNLLLR 134 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 L P G K V GL FH +N + ++ + Sbjct: 135 LSFPNPDCVVNLSYKYGVPPDEATGLVIKAA--EMGLAVRGLCFHVGSQNLNPYKYTDAI 192 Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQI--YLE 232 ++ F ++++ +GGG P++ F ++E + Y I E Sbjct: 193 AECKRVFNSLALHGIYLDFLDIGGGFPVEYIEPIMPLRRFFSPIQEALDSYFPNITVIAE 252 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP---YT 289 PG I+ + L TV+ S+ LY + + Sbjct: 253 PGRFIIGDAVNLVMTVVGKSKRNNVWWYYVDDGLYGSFSGRLYDHCDYLILSEREGPREQ 312 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ G +C + D+ ++IGD + + Y + FNG V + Sbjct: 313 CIIAGPTCDSFDVIYHNTVMPQLEIGDTLIALSMGAYTAASASNFNGYPPARTVVVD 369 >gi|328886304|emb|CCA59543.1| Diaminopimelate decarboxylase [Streptomyces venezuelae ATCC 10712] Length = 432 Score = 163 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 58/403 (14%), Positives = 107/403 (26%), Gaps = 42/403 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+YL D L + ++ +LK + L+ + S+ E Sbjct: 20 GTPFYLYDGDALEGRMRALREAFD-PRLEFFFSLKSNPNIAVCALLHAHGARAEVCSMTE 78 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK--LHKK 117 ++ E + K + A + ++ + +L + A++ + Sbjct: 79 LLTARQAGVAPEDIIFLGPGKSRDEIAACLDEGISALVCESTQELALIDELARERGVRAP 138 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN----------- 166 + LR+NP+ S L + G + Sbjct: 139 VALRVNPAFSVKGSGLTMG-GKPRQFGIDEAQLLADPDLAARHPHVRLMGVQVYMGTRIL 197 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE--- 223 E + + E+ +E + +GGG+ D L Sbjct: 198 SEQSVVENSTRIFDLAERLSAALGFPLELVDIGGGLGVAYFDGENDLDLSVLATDLNPVL 257 Query: 224 ------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----- 272 S ++ +E G + T V + ++ V H Sbjct: 258 AGFADRHPSTRLVMELGRYLTAEAGTYVLRVRYVKTSLGENFAVTDGGTHHHMAAVGIGS 317 Query: 273 -----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + TG T V G C D + P+ GD + + Y Sbjct: 318 FVKRNFPMRLLSGAGEETGTETWNVTGPLCTPNDTLAKKIQLPPLAPGDLLGVDRSGAYG 377 Query: 328 INRKN-WFNGINMPTIAVKNVDGTIKAIREFS-YNDY--YNNL 366 F P + VDG +RE D L Sbjct: 378 PTASPVNFLSHGYPAEVLV-VDGRAHLVREPDRPADLLSKQRL 419 >gi|296224503|ref|XP_002758083.1| PREDICTED: ornithine decarboxylase [Callithrix jacchus] Length = 461 Score = 163 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 63/383 (16%), Positives = 117/383 (30%), Gaps = 41/383 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + + L G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVMPFYAVKCNDSRAIVNALAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAICRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAITDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSEVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y++ + G +C D E + +GD + FE++ Y + Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKA 353 + FNG PTI + Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQL 416 >gi|254521715|ref|ZP_05133770.1| diaminopimelate decarboxylase, putative [Stenotrophomonas sp. SKA14] gi|219719306|gb|EED37831.1| diaminopimelate decarboxylase, putative [Stenotrophomonas sp. SKA14] Length = 864 Score = 163 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 107/365 (29%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + I + A+K + + L G S E Sbjct: 505 GTPRYVYHLPTVRARARALAAI--KPIDQRYYAIKANSHPAILQLLEAEGFGLECVSHGE 562 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + + ++ E +A + T+ + V L ++ D ++++ Sbjct: 563 LKHVFQHLPELSPKRVLFTPSFCPRSEYEAAFALGVTVTVDNVEALQRWPDL--FRNREL 620 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSF 172 LR++ S+ G V GL H ++ Sbjct: 621 WLRVDLGRGEGHHAKVRTGGKDSKFGLPIARVDEFVRAATELGSRVVGLHAHLGSGVETA 680 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-----YSV 227 + M + ++ I +GGG+ D E + + Sbjct: 681 QHWRLMCDELAGFARRIG-SVQTIDIGGGLPIPYSDEDEPFDLDAWAEGLAEVKALHPAF 739 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V + L T + ++ V +D+ + + L + Sbjct: 740 RLAIEPGRYLVAESGVLLTHATQVVEKDGVRRVGLDAGMNTLMRPALYDAWHDIENLSRQ 799 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C + D+FG+ D + D Y N +N MP Sbjct: 800 GGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIADAGAYGYVMSNTYNQRAMPR 859 Query: 342 IAVKN 346 V Sbjct: 860 EDVIE 864 >gi|190573193|ref|YP_001971038.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Stenotrophomonas maltophilia K279a] gi|190011115|emb|CAQ44724.1| putative lysine-sensitive aspartokinase III [Stenotrophomonas maltophilia K279a] Length = 864 Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 108/365 (29%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + I + A+K + + L G S E Sbjct: 505 GTPRYVYHLPTVRARARALAAI--KPIDQRYYAIKANSHPAILQLLEAEGFGLECVSHGE 562 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + + ++ E +A + T+ + V L ++ D ++++ Sbjct: 563 LKHVFQHLPELSPKRVLFTPSFCPRSEYEAAFALDVTVTVDNVEALQRWPDL--FRNREL 620 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSF 172 LR++ S+ G V GL H ++ Sbjct: 621 WLRVDLGRGEGHHAKVRTGGKESKFGLPIARVDEFVRAATDLGSRVVGLHAHLGSGVETA 680 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-----YSV 227 + M + ++ I +GGG+ E + + Sbjct: 681 QHWRLMCDELAGFARRIG-SVQTIDIGGGLPIPYSAEDEPFDLDAWAEGLAEVKALHPAF 739 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V + L T + ++ V +D+ + A + L + Sbjct: 740 RLAIEPGRYLVAESGVLLTHATQVVEKDGVRRVGLDAGMNALMRPALYDAWHDIENLSRQ 799 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C + D+FG+ D + D Y + N +N +P Sbjct: 800 GGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIADAGAYGYSMANTYNQRMLPR 859 Query: 342 IAVKN 346 V Sbjct: 860 EDVIE 864 >gi|189239038|ref|XP_968571.2| PREDICTED: similar to ornithine decarboxylase [Tribolium castaneum] Length = 433 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 63/371 (16%), Positives = 120/371 (32%), Gaps = 24/371 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ T V+ A+KC + + + L G +S E+ Sbjct: 13 FYVCDVGDIVRKHKTWKAFLPR--VQPHYAVKCNDSLTVLEVLAALGTGFDCASKGEINK 70 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + K +N T+ F+ ++L+K K+ I +R Sbjct: 71 VLSLGVSPDRIIFANPAKPSSHIRHAAATNVSTMTFDNETELHKIKNFHPDSKLVIRIRC 130 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + S + P + S NV G+ FH + F + Sbjct: 131 DATDSQCPLGMKFGCDPVLEAPRLLQTAR-SLNLNVIGVSFHVGSGCREPSVFKRAIAMS 189 Query: 183 EKEFG---HFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + F + +GGG D + L ++ SV+I EPG Sbjct: 190 REVFDLGQALGYNFTLLDIGGGFPGDRGTSLDEIAQVVNSALDDYFPDPSVEIIAEPGRF 249 Query: 237 IVTNTTTLNTTVLDI-----------SENIKNLVIVDSSVEAHVPDYLLYQESA-TIYPN 284 V++ TL + I V S + D+ P Sbjct: 250 YVSSAYTLICNIHSIRDVISEDETTRHRMYYINDGVYGSFNCILYDHQRVVPLPLHEVPG 309 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + Y++ + G +C D E + +GD + FE++ Y + + FNG + + V Sbjct: 310 SKYYSSSIWGPTCDGLDQVVEEVLLPEMGLGDWLVFENMGAYTLPVASPFNGFPVAKVHV 369 Query: 345 KNVDGTIKAIR 355 + ++ Sbjct: 370 VADESIWVLLK 380 >gi|270010871|gb|EFA07319.1| hypothetical protein TcasGA2_TC015912 [Tribolium castaneum] Length = 456 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 63/371 (16%), Positives = 120/371 (32%), Gaps = 24/371 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ T V+ A+KC + + + L G +S E+ Sbjct: 36 FYVCDVGDIVRKHKTWKAFLPR--VQPHYAVKCNDSLTVLEVLAALGTGFDCASKGEINK 93 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + K +N T+ F+ ++L+K K+ I +R Sbjct: 94 VLSLGVSPDRIIFANPAKPSSHIRHAAATNVSTMTFDNETELHKIKNFHPDSKLVIRIRC 153 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + S + P + S NV G+ FH + F + Sbjct: 154 DATDSQCPLGMKFGCDPVLEAPRLLQTAR-SLNLNVIGVSFHVGSGCREPSVFKRAIAMS 212 Query: 183 EKEFG---HFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + F + +GGG D + L ++ SV+I EPG Sbjct: 213 REVFDLGQALGYNFTLLDIGGGFPGDRGTSLDEIAQVVNSALDDYFPDPSVEIIAEPGRF 272 Query: 237 IVTNTTTLNTTVLDI-----------SENIKNLVIVDSSVEAHVPDYLLYQESA-TIYPN 284 V++ TL + I V S + D+ P Sbjct: 273 YVSSAYTLICNIHSIRDVISEDETTRHRMYYINDGVYGSFNCILYDHQRVVPLPLHEVPG 332 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + Y++ + G +C D E + +GD + FE++ Y + + FNG + + V Sbjct: 333 SKYYSSSIWGPTCDGLDQVVEEVLLPEMGLGDWLVFENMGAYTLPVASPFNGFPVAKVHV 392 Query: 345 KNVDGTIKAIR 355 + ++ Sbjct: 393 VADESIWVLLK 403 >gi|18859145|ref|NP_571876.1| ornithine decarboxylase [Danio rerio] gi|9858179|gb|AAG01031.1|AF290981_1 ornithine decarboxylase [Danio rerio] gi|18652915|dbj|BAB84694.1| ornithine decarboxylase [Danio rerio] gi|28839552|gb|AAH47796.1| Odc1 protein [Danio rerio] gi|39645422|gb|AAH63932.1| Ornithine decarboxylase 1 [Danio rerio] gi|66911315|gb|AAH97034.1| Odc1 protein [Danio rerio] gi|182889558|gb|AAI65342.1| Odc1 protein [Danio rerio] Length = 461 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 62/374 (16%), Positives = 118/374 (31%), Gaps = 34/374 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L ++R + A+KC + + TL G +S E+ + Sbjct: 40 FYVADLGDVLK--KHLRWLRVLPRITPFYAVKCNDSRAVVTTLASLGAGFDCASKTEIQI 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K S + S++ K + K+ LRI Sbjct: 98 VQSVGVDPSRIIYANPCKQVSQIKYASAHGVQMMTFDSEVELMKVARSHENAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH +S + + Sbjct: 158 DDSKAVCRLSVKFGATLKSSRLLLERAKELGLDVIGVSFHVGSGCTDPETYSQAISDARY 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDK-DYPVKDFCQRLKEFSEKYSV-----QIYLEPGE 235 F + + +GGG ++ ++ + +KY +I EPG Sbjct: 218 VFDIGAELGYNMSLLDIGGGFPGSEDTKLKFEEIAAVINPALDKYFPVDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL----------------DISENIKNLVIVDSSVEAHVPDYLLYQESA 279 V + TL ++ D+S + + V+ V L Sbjct: 278 YYVASAYTLAVNIIAKKVIMKEQSASDEEEDVSNDRTLMYYVNDGVYGSFNCILYDHAHV 337 Query: 280 TIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + P Y + G +C D E +++GD + FE++ Y + + Sbjct: 338 LPTLHKKPKPDERMYPCSIWGPTCDGLDRIVEQCSLPDMQVGDWLLFENMGAYTVAASST 397 Query: 334 FNGINMPTIAVKNV 347 FNG P I Sbjct: 398 FNGFQKPDIYYIMS 411 >gi|330830642|ref|YP_004393594.1| Ornithine decarboxylase [Aeromonas veronii B565] gi|328805778|gb|AEB50977.1| Ornithine decarboxylase [Aeromonas veronii B565] Length = 388 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 111/361 (30%), Gaps = 16/361 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P L+DK + V+L ALK + L + ++ E Sbjct: 23 GSPLLLLDKAAVRKQYRALTSAL--PDVRLHYALKPLPHEAVVSVLKEEGACFDLATNGE 80 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V L + + K +F + L K K K+ LR Sbjct: 81 VDLVRSQGVRPGRCIHTHPIKRDSDIRYALEFGCTVFVYDNPLELEKFIPYKDEVKLLLR 140 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 ++ +K L+ ++ V GL FH + + Sbjct: 141 VSFPNPETKVDLSKKFGCTPEQALPLLQLAHAKGIKVMGLSFHVGSQVPHARRHVQAIDA 200 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEFSEKYSVQI--YLEPG 234 + + + +GGG + ++ + FC ++E K + EPG Sbjct: 201 CREIMEQAWALGLKPWVLDIGGGFPVDYEGGEFDIDGFCAPIREALAKLPATVQKIAEPG 260 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYT 289 I T ++V+ + + S + D++ Y S + Sbjct: 261 RFISAPAMTSVSSVMGKAHRGDKIWYYLDDGLYGSYNGQLYDHVTYPVSTPYASGEQ-HN 319 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 +++ G +C + D+ + + IG+ + + + Y + FN +I + + Sbjct: 320 SVLSGPTCDSVDVIRDGIMLPDLAIGELVVGKVMGAYTWASASTFNFFPKASILILDSSQ 379 Query: 350 T 350 Sbjct: 380 K 380 >gi|66813288|ref|XP_640823.1| group IV decarboxylase [Dictyostelium discoideum AX4] gi|74897175|sp|Q54UF3|DCOR_DICDI RecName: Full=Probable ornithine decarboxylase; Short=ODC gi|60468851|gb|EAL66851.1| group IV decarboxylase [Dictyostelium discoideum AX4] Length = 461 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 62/370 (16%), Positives = 118/370 (31%), Gaps = 32/370 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ VK A+KC G+ L+ +S E+ Sbjct: 87 FFVADVGVIIKQWQ--KWVKNLPNVKPYYAVKCNPTVGVLRVLDALGTNYDCASRTEIES 144 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 Y K A N + F+ +S+L K + + + + Sbjct: 145 VLNLGVDPSRIIYANPCKQISALKFARAHNVKLMTFDNLSELEKIEKFFPEAELVLRIAP 204 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAML 179 + S S +F + + V G+ FH +S + M+ Sbjct: 205 DDSKSVMRFGSKFGVHIDDC--NDLLEMAKEMNLKVVGVSFHVGSGCQSGDSYADALIMV 262 Query: 180 KNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 K++ ++ + +GGG +K + +V+I EPG Sbjct: 263 KSVFDMAKKLNMELTLVDVGGGFTGSDDEKFNAFTKVIREKTAELFSPNVKIIAEPGRYF 322 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQE-------------SATIYP 283 + TL TV+ + ++ Y Y A + P Sbjct: 323 AAQSHTLAVTVISKRSIKQEDNRQHPRRTSNNMRQYNYYLADGVYGSFNNTKFDYAKVEP 382 Query: 284 ------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 P + G +C + D+ + +KIGD + F+D+ Y I + FNG Sbjct: 383 LLLKPSTKQPTPCTLFGPTCDSIDVVLKDTQIPELKIGDWLYFQDMGAYTIASSSSFNGF 442 Query: 338 NMPTIAVKNV 347 P + N Sbjct: 443 CPPPVYYYNS 452 >gi|109475568|ref|XP_232777.4| PREDICTED: similar to ornithine decarboxylase [Rattus norvegicus] gi|109477346|ref|XP_001062262.1| PREDICTED: similar to ornithine decarboxylase [Rattus norvegicus] Length = 425 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 100/362 (27%), Gaps = 25/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ + D L + T L A+KC + L G +S E+ Sbjct: 51 PFMVADLDVLASRHQTFLQALPRVW--PFYAVKCNNRPSLLLVLAALGTGFDCASQGELE 108 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + K + C + S+ K ++ LRI Sbjct: 109 QVLGLGVAPSRIIFANPCKAVSHIQYAARCGVQLLTFDSEEELTKLARHHPGARLILRIQ 168 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S F L + V G FH + + + + + Sbjct: 169 TLGGRSTFPLHTKFGARLLACGRLLQVARELGLAVVGASFHVGSDCHTPQSYRQAIADCH 228 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKD------FCQRLKEFSEKYSVQIYLEPG 234 + F Q+ + LGGG + + + F E V++ EPG Sbjct: 229 RVFEMGCKAGHQMSLLDLGGGFPGIEGSEAKFEEMARVVNAALAQYFPEGTGVEVIAEPG 288 Query: 235 EAIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + T ++ + + D + Sbjct: 289 RFYAESVCTAAVNIIAKKASLEPGGHRKLAYYLNEGHYGAFRIFLRDPVPRIPIVVKELP 348 Query: 285 TGPY--TAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + P+ + G +C A D +F + +GD + F D+ Y + FNG + T Sbjct: 349 SDPHLFPCTLYGPTCDAFDRLFSTEVQLPELDVGDWLVFPDMGAYRSTMSSTFNGFPITT 408 Query: 342 IA 343 + Sbjct: 409 VY 410 >gi|296112240|ref|YP_003626178.1| ornithine decarboxylase [Moraxella catarrhalis RH4] gi|295919934|gb|ADG60285.1| ornithine decarboxylase [Moraxella catarrhalis RH4] gi|326560709|gb|EGE11077.1| ornithine decarboxylase [Moraxella catarrhalis 46P47B1] gi|326561751|gb|EGE12086.1| ornithine decarboxylase [Moraxella catarrhalis 7169] gi|326571717|gb|EGE21730.1| ornithine decarboxylase [Moraxella catarrhalis BC8] gi|326571828|gb|EGE21834.1| ornithine decarboxylase [Moraxella catarrhalis BC7] gi|326578069|gb|EGE27929.1| ornithine decarboxylase [Moraxella catarrhalis O35E] Length = 391 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 122/363 (33%), Gaps = 30/363 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP ++D ++ + + + K+ A+K A + L +S+YE Sbjct: 24 ETPLLVVDLSRIKTKYEEMVTLF--PKAKIHYAMKASPATEVVKYLADLGSNFDCASIYE 81 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + + +Y K N ++ T S+ + + A Sbjct: 82 LDRVLDCGVTADRISYGNTIKKAVHIKYAYNKGIDLYATDSKADLI-NIANNAPGSKVFV 140 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + ++++ + G+ FH + K + L Sbjct: 141 RILVHGADTAEWPLSRKFGCHPDMAIDLLVQAKNLGLVPYGISFHVGSQQKDVAAWDDAL 200 Query: 180 KNIEKEFGHF----ITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFS-----EKYSVQ 228 ++ F +++ I+LGGG P+ + + + + E + Sbjct: 201 AKVKYMFDWMKYEEGIKLQMINLGGGFPTNYISEVNPISVYAEEIHRYLSEDFDEDEMPE 260 Query: 229 IYLEPGEAIVTNTTTLNTTVLDI---------SENIKNLVIVDSSVEAHVPDYLLYQESA 279 I LEPG ++V ++ L + V+ I ++ + +E + Sbjct: 261 IILEPGRSMVGDSGVLVSEVVLISRKSRTDLTRWVYTDVGLFQGLIETLGEAIKYPVYTP 320 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335 + T T ++ G +C + DI E + + ++IGD++ + Y + + FN Sbjct: 321 KMETATEKGTVILAGPTCDSTDIMYEDAAYKLPQNLEIGDKLYWLTTGAYTNSYSSVEFN 380 Query: 336 GIN 338 G Sbjct: 381 GFP 383 >gi|229819776|ref|YP_002881302.1| diaminopimelate decarboxylase [Beutenbergia cavernae DSM 12333] gi|229565689|gb|ACQ79540.1| diaminopimelate decarboxylase [Beutenbergia cavernae DSM 12333] Length = 455 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 59/406 (14%), Positives = 118/406 (29%), Gaps = 44/406 (10%) Query: 3 KTPYYLIDKQKLLNNLDT----ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 TP Y++D+ L + V + A K F + + ++ ++ Sbjct: 46 GTPVYVLDEADLRARARAYRDAFTRELAPSSVHVYYAGKAFLSIAVARWVHAEGLRIDTA 105 Query: 59 SLYEVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK-- 113 + E+ + G + K A+ + I+ +++ ++ + D A + Sbjct: 106 TGGELAVALRAGIPGADIGMHGNNKSDAEIDRALAAGVGRIVVDSLPEVARVADAAARRG 165 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164 + + +R+ V + G + + GL H Sbjct: 166 VRAPVMVRVTTGVHAGGHEYISTAHEDQKFGLSIAAGRAEEAVAAVLARPELELLGLHSH 225 Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFC 215 + F ++L+ + + + LGGG P Sbjct: 226 IGSQVLEAEAFTVAARSVLELRARIAETHGVLVGEVDLGGGYGVAYLPGEVPLDPAMLAA 285 Query: 216 QRLKEFSEKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN------LVIVDS 263 + + E + + +EPG AIV TV + V VD Sbjct: 286 ELARTVREVCAELGTDVPDVSIEPGRAIVAPAGCTLYTVGTVKPVRATDGADRLYVSVDG 345 Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318 + + L A+ P + V G+ C +GDI V GD + Sbjct: 346 GMSDSIRPALYGAAYTATIASRASAAPPVRSRVVGKHCESGDIVVHDVDLPADVAAGDLL 405 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + Y + + +N + P + IR + D Sbjct: 406 AVPATGAYGRSMASQYNLVPRPGVVAVAGGEARAVIRRETEEDVLA 451 >gi|114576093|ref|XP_001156697.1| PREDICTED: ornithine decarboxylase 1 isoform 1 [Pan troglodytes] Length = 414 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 65/378 (17%), Positives = 116/378 (30%), Gaps = 41/378 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ R ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ +++ + AHV Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y++ + G +C D E + +GD + FE++ Y + Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVD 348 + FNG PTI Sbjct: 394 ASTFNGFQRPTIYYVMSG 411 >gi|194364789|ref|YP_002027399.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Stenotrophomonas maltophilia R551-3] gi|194347593|gb|ACF50716.1| diaminopimelate decarboxylase [Stenotrophomonas maltophilia R551-3] Length = 864 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 107/365 (29%), Gaps = 26/365 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + I + A+K + + L G S E Sbjct: 505 GTPRYVYHLPTVRARARALAAI--KPIDQRYYAIKANSHPAILQLLEAEGFGLECVSHGE 562 Query: 63 VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + + ++ E +A + T+ + V L ++ D ++++ Sbjct: 563 LKHVFQHLPELSPKRVLFTPSFCPREEYEAAFALGVTVTVDNVEALQRWPDL--FRNREL 620 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSF 172 LR++ S+ G V GL H ++ Sbjct: 621 WLRVDLGRGEGHHAKVRTGGKDSKFGLPIARVDEFVRAATELGTRVVGLHAHLGSGVETA 680 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-----YSV 227 + M + ++ I +GGG+ D E + + Sbjct: 681 QHWRLMCDELAGFARRIG-SVQTIDIGGGLPIPYSDEDEPFDLDAWAEGLAEVKALHPAF 739 Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282 ++ +EPG +V + L T + ++ V +D+ + + L + Sbjct: 740 RLAIEPGRFLVAESGVLLTHATQVVEKDGVRRVGLDAGMNTLMRPALYDAWHDIENLSRQ 799 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 V G C + D+FG+ D + D Y N +N MP Sbjct: 800 GGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIADAGAYGYVMSNTYNQRAMPR 859 Query: 342 IAVKN 346 V Sbjct: 860 EDVIE 864 >gi|158421957|ref|YP_001523249.1| ornithine decarboxylase [Azorhizobium caulinodans ORS 571] gi|158328846|dbj|BAF86331.1| ornithine decarboxylase [Azorhizobium caulinodans ORS 571] Length = 376 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 103/358 (28%), Gaps = 29/358 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N ++ A+K + L + +S+ E+ Sbjct: 17 PCVVVDLDVVRANYTAFARAL--PDTRVFYAVKANPDAAILKALAELGSCFDCASVQEIE 74 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ + A + ++ K A + Sbjct: 75 MALFAGATPDRISFGNTIKKERDIERAYKIGVRLFAVDCYEEVEKIARVAPGARVFCRIL 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + P + + G+ FH + K+ + L + Sbjct: 135 CDGAGAEWPLSRKFGCVPEMA--PDVLEHAFRLGLSPYGVSFHVGSQQKNVHAWDQALGS 192 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 F + ++LGGG K L+ + +E Sbjct: 193 AAYIFRECAVRGISLSMVNLGGGFPTKYLQDVPKAQAYGEAIFDSLRRHFGNAIPETIME 252 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V N + T V+ IS+ ++ + ++ + + + Y + Sbjct: 253 PGRGMVGNAGIIETEVVLISKKAESDTMRWVYLDIGKFGGLAETMDEAIRYPLRTPRDGD 312 Query: 285 TGPYTAMVCGRSCLAGDIFGEF--HFEK-PVKIGDRISFEDVAGYNINRKNW-FNGIN 338 ++ G +C + D+ E + IGD++ E Y FNG Sbjct: 313 DTA-PCVLAGPTCDSADVLYEKTPVELPLSLSIGDKVLIEACGAYTTTYSAVAFNGFP 369 >gi|169774255|ref|XP_001821595.1| ornithine decarboxylase [Aspergillus oryzae RIB40] gi|83769458|dbj|BAE59593.1| unnamed protein product [Aspergillus oryzae] Length = 399 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 108/357 (30%), Gaps = 25/357 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D +++ ++ A+KC + L++ +S E+ Sbjct: 35 PFFVADGSRIVEQHLRWKSSL--PDIQPFYAVKCNSDVNFLRYLDRLGVNFDCASQGEIE 92 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L + K + + K K + LRI Sbjct: 93 LILSLGVDPSRIIFAHPCKSISALHFAAKQGIRWATFDNIDELEKVKQHSPQIGLLLRIF 152 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 +K L D ++ + G+ FH F+ ++ Sbjct: 153 AEDDGAKVCLGDKFGAPWNTTVALLERARELHLQIVGVSFHIGSGASDPEAFTTAIQQAR 212 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F + + +GGG T+ ++ L V++ EPG T Sbjct: 213 HVFDQGERLGFNMTVLDVGGGFQHTNFEFMASSLRPALAREFGDRPVRVIAEPGRFFATP 272 Query: 241 TTTLNTTVLDISEN------------------IKNLVIVDSSVEAHVPDYLLYQESATIY 282 TL V+ + S E ++P + E + Sbjct: 273 CYTLVCKVIARRTHIGAAPSNPADMLYQNDGLYGCFSCGWSEGEEYMPVLVKQNEGRDDH 332 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 +G + + G +C + D + + VK+GD + ++D+ Y ++ + FNG Sbjct: 333 RESGEHRYSLWGPTCDSIDQIAKEVVMDGEVKVGDWLVYKDMGAYTMSASSQFNGFP 389 >gi|154246083|ref|YP_001417041.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2] gi|154160168|gb|ABS67384.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2] Length = 376 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 102/358 (28%), Gaps = 29/358 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N ++ A+K + L + +S+ E+ Sbjct: 17 PCVVVDLDVVRTNYQAFARAL--PDTRVYYAVKANPDAAILQALEELGSSFDCASVGEIE 74 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + G E ++ + A ++ + K A + Sbjct: 75 MVLATGAGAERISFGNTIKKERDIERAFRLGVRLFAVDSYEEAEKIARVAPHAKVFCRIL 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + P + G+ FH + K+ + L + Sbjct: 135 CDGAGAEWPLSRKFGCEPEMAA--DVLEHAHRLGLAAYGVSFHVGSQQKNVHAWDGALAS 192 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 + F + ++LGGG L++ + +E Sbjct: 193 AAQIFRACAERGISLSMVNLGGGFPTRYLQEVPGAQSYGEAIFSSLRKHFGNQVPETIME 252 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V N + V+ IS+ + + ++ + + + Y + Sbjct: 253 PGRGMVGNAGLIEAEVVLISKKSEADAMRWVYLDIGKFGGLAETMDEAIRYPLRTPRDGD 312 Query: 285 TGPYTAMVCGRSCLAGDIFGEF--HFEK-PVKIGDRISFEDVAGYNINRKNW-FNGIN 338 ++ G +C + D+ E + IGD++ E Y FNG Sbjct: 313 DTA-PCVLAGPTCDSADVMYEKTPVELPLSLSIGDKVIIEACGAYTTTYSAVAFNGFP 369 >gi|157117134|ref|XP_001652951.1| ornithine decarboxylase [Aedes aegypti] gi|108876152|gb|EAT40377.1| ornithine decarboxylase [Aedes aegypti] Length = 416 Score = 162 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 65/395 (16%), Positives = 124/395 (31%), Gaps = 43/395 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P ++++ ++ K V+ A+KC + TL G +S E Sbjct: 29 DSPVHILNLDDVVAKHRNWRE--KLPRVEPFYAVKCNDDPAIIRTLVALGAGFDCASKKE 86 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + + + + Y K + C + F+ +L+K K + + Sbjct: 87 IEMVLKLGGNADKIIYAHTAKSMDSITYAKTCGISMMTFDGEIELDKIKKLHPEASLVLR 146 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R + + P K +S +V G+ FH NK+ CF + Sbjct: 147 IRYDSPDAAVSLGKKFGCDPEHEAPHLLKYA-KSLGLSVVGISFHVGSGNKNAECFYGAI 205 Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYL 231 K F + + +GGG P+ F + + ++Y ++ Sbjct: 206 KTTRTLFNLASELDFDLSLLDIGGGFPGDHDK-PIDTFVKAINLALQRYFPIKSGVRVIA 264 Query: 232 EPGEAIVTNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLLYQE--- 277 EPG V + L V ISE + L + Sbjct: 265 EPGTYYVASAVNLVANVQSKRIIRSGPQATISEIMYYLNDGMFGSFDWLNPRCYPPVVIP 324 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + I + + + G +C + D+ + ++IGD + F D+ Y FNG Sbjct: 325 GNPQIVRSRDQFLTTLWGPTCDSTDLIASGWMMEELQIGDFLVFNDMGAYGSVLSTNFNG 384 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYY-----NNL 366 P + V + +Y+ L Sbjct: 385 FAKPKMMVY--------VSRTTYDQLKLGRNDRRL 411 >gi|326574369|gb|EGE24312.1| ornithine decarboxylase [Moraxella catarrhalis CO72] Length = 391 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 122/363 (33%), Gaps = 30/363 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP ++D ++ + + + K+ A+K A + L +S+YE Sbjct: 24 ETPLLVVDLSRIKTKYEEMVTLF--PKAKIHYAMKASPATEVVKYLADLGSNFDCASIYE 81 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + + +Y K N ++ T S+ + + A Sbjct: 82 LDRVLDCGVTADRISYGNTIKKAVHIKYAYNKGIDLYATDSKADLI-NIANNAPGSKIFV 140 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + ++++ + G+ FH + K + L Sbjct: 141 RILVHGADTAEWPLSRKFGCHPDMAVDLLVQAKNLGLVPYGISFHVGSQQKDVAAWDDAL 200 Query: 180 KNIEKEFGHF----ITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFS-----EKYSVQ 228 ++ F +++ I+LGGG P+ + + + + E + Sbjct: 201 AKVKYMFDWMKYEEGIKLQMINLGGGFPTNYISEVNPISVYAEEIHRYLSEDFDEDEMPE 260 Query: 229 IYLEPGEAIVTNTTTLNTTVLDI---------SENIKNLVIVDSSVEAHVPDYLLYQESA 279 I LEPG ++V ++ L + V+ I ++ + +E + Sbjct: 261 IILEPGRSMVGDSGVLVSEVVLISRKSRTDLTRWVYTDVGLFQGLIETLGEAIKYPVYTP 320 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335 + T T ++ G +C + DI E + + ++IGD++ + Y + + FN Sbjct: 321 KMETATEKGTVILAGPTCDSTDIMYEDAAYKLPQNLEIGDKLYWLTTGAYTNSYSSVEFN 380 Query: 336 GIN 338 G Sbjct: 381 GFP 383 >gi|326562308|gb|EGE12634.1| ornithine decarboxylase [Moraxella catarrhalis 103P14B1] gi|326569028|gb|EGE19097.1| ornithine decarboxylase [Moraxella catarrhalis BC1] gi|326575512|gb|EGE25437.1| ornithine decarboxylase [Moraxella catarrhalis 101P30B1] Length = 391 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 122/363 (33%), Gaps = 30/363 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP ++D ++ + + + K+ A+K A + L +S+YE Sbjct: 24 ETPLLVVDLSRIKTKYEEMVTLF--PKAKIHYAMKASPATEVVKYLADLGSNFDCASIYE 81 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + + +Y K N ++ T S+ + + A Sbjct: 82 LDRVLDCGVTADRISYGNTIKKAVHIKYAYNKGIDLYATDSKADLI-NIANNAPGSKVFV 140 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + ++++ + G+ FH + K + L Sbjct: 141 RILVHGADTAEWPLSRKFGCHPDMAVDLLVQAKNLGLVPYGISFHVGSQQKDVAAWDDAL 200 Query: 180 KNIEKEFGHF----ITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFS-----EKYSVQ 228 ++ F +++ I+LGGG P+ + + + + E + Sbjct: 201 AKVKYMFDWMKYEEGIKLQMINLGGGFPTNYISEVNPISVYAEEIHRYLSEDFDEDEMPE 260 Query: 229 IYLEPGEAIVTNTTTLNTTVLDI---------SENIKNLVIVDSSVEAHVPDYLLYQESA 279 I LEPG ++V ++ L + V+ I ++ + +E + Sbjct: 261 IILEPGRSMVGDSGVLVSEVVLISRKSRTDLTRWVYTDVGLFQGLIETLGEAIKYPVYTP 320 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335 + T T ++ G +C + DI E + + ++IGD++ + Y + + FN Sbjct: 321 KMETATEKGTVILAGPTCDSTDIMYEDAAYKLPQNLEIGDKLYWLTTGAYTNSYSSVEFN 380 Query: 336 GIN 338 G Sbjct: 381 GFP 383 >gi|320450162|ref|YP_004202258.1| diaminopimelate decarboxylase [Thermus scotoductus SA-01] gi|320150331|gb|ADW21709.1| diaminopimelate decarboxylase [Thermus scotoductus SA-01] Length = 387 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 122/371 (32%), Gaps = 22/371 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+Y D ++ L + ALK G+ L G + SL E Sbjct: 18 PTPFYAYDWGRVRAQLARLREAF--PFARFFYALKANPRLGLLRRLRDLGLGAEAVSLGE 75 Query: 63 VMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V+ FG + +N + A+ ++ ++ + + ++ L Sbjct: 76 VLRAYRSGFGPDQVVWNGPVKTPEALTALKGREPLVVLDSEGDVGRVAR--YLPGARVLL 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKSFL 173 R+NP + + R S+ G + + ++ + GL H Sbjct: 134 RVNPDLPVNTHGHLATGRGESQFGV-LPEAVPGLVRTIREKGLTFLGLHLHLGSALSRVE 192 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 F +E + + ++LGGG ++ + LK + Y Q++LEP Sbjct: 193 DFLEGYGVLEALYPQVGP-VAVLNLGGGFGLDLPLEALQ---EPLKSLARLYGAQVWLEP 248 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT---- 289 G +V L + V+ + E + V++D+ + + + L + Sbjct: 249 GRYLVAEAGVLVSRVVGLKETRRRYVLLDAGMTSLIRPALYGARHPILPLYPREGREEGI 308 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 + G +C AGDI + G+ ++ + Y + + P + G Sbjct: 309 FDLAGPACEAGDILAREVRLPVPQEGEALAILEAGAYGASMSLTYLDTPRPLELLWTGAG 368 Query: 350 TIKAIREFSYN 360 + Sbjct: 369 WEVLRTREPWE 379 >gi|312879707|ref|ZP_07739507.1| ornithine decarboxylase [Aminomonas paucivorans DSM 12260] gi|310782998|gb|EFQ23396.1| ornithine decarboxylase [Aminomonas paucivorans DSM 12260] Length = 392 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 122/358 (34%), Gaps = 26/358 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ LID ++ D +R+ + + A+K + L +S+YE Sbjct: 30 QTPFLLIDLGRIAERYDEL--VREMSFARPFYAVKANPHESILKLLAARGSSFDVASVYE 87 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + E +Y K A + ++ S L K + A K+ Sbjct: 88 LDQMLALGVEPERISYGNTIKKARDIAYAYHKGIRLFATDSESDLRKIAENA--PGSKVF 145 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 RI S + + L+ + G+ FH + + + ++ Sbjct: 146 YRILSDCSGADWPLSRKFGTHPDSIYRLIGLSTRLPVQPYGVSFHVGSQQRDIGQWGYLI 205 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQIY 230 F F +++ I+LGGG+ P+ + ++ F E+ +I+ Sbjct: 206 STCRYLFDSAREFNVELKMINLGGGLPAQYFDPTPPIALYASEIRRFLEEDFGKDLPEIF 265 Query: 231 LEPGEAIVTNTTTLNTTVLDIS-----ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 +EPG +V + L T V+ IS + + + + Sbjct: 266 IEPGRGMVGDAGILVTEVVLISKKSQVNPYSWVYLDTGKFGGLIETLDEAIKYPVYVDKK 325 Query: 286 GP-YTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 GP ++ G +C + D+ ++ + GDR+ F Y + + FNG Sbjct: 326 GPSQKVILAGPTCDSVDVLYEQFKYELPVTLAEGDRVYFLSTGAYTASYCSVNFNGFP 383 >gi|222099782|ref|YP_002534350.1| Ornithine decarboxylase [Thermotoga neapolitana DSM 4359] gi|221572172|gb|ACM22984.1| Ornithine decarboxylase [Thermotoga neapolitana DSM 4359] Length = 386 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 112/363 (30%), Gaps = 22/363 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+ L D + K G + A+K + + L + +S E Sbjct: 13 KTPFLLFDLSVVEKKFLEMKAALK--GADIYYAVKANSHPRILSLLAKLGCNFDVASKGE 70 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + G+ ++ ++ A + ++ ++ K A + Sbjct: 71 IEKLLALGISGKRMSFGNTIKKEEDIAFAYKNGIRLFAVDSEMEIEKVAISAPGSRIFVR 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S + P L I G+ FH +N + + + Sbjct: 131 IATDGSDADWPLSRKFGTDPDHALDLLFYAAKMKLIPA--GVSFHVGSQNLNPESWRKAI 188 Query: 180 KNIEKEFGH---FITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIY---- 230 K F + +++GGG +++ + ++E ++ ++ Sbjct: 189 SVAGKIFKKAMRSGLNLFLLNVGGGFPVQHRKPIPTMEEIGRVIEEAIDENLWFVHGLKL 248 Query: 231 -LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH----VPDYLLYQESATIYPNT 285 EPG +V L T VL SE + + H Y+ N Sbjct: 249 ISEPGRYMVGEAGWLVTKVLLKSERNGEKWVYLDAGVFHGLAETMQNFEYEVRVLGKEND 308 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + G +C + D+ + + + D + F + Y + +FNGI P + Sbjct: 309 ELEEYHLAGPTCDSVDVIYDRILLPKTITLNDLVCFVNAGAYTVEYNTYFNGIEPPKMVF 368 Query: 345 KNV 347 Sbjct: 369 VEE 371 >gi|256379655|ref|YP_003103315.1| Orn/DAP/Arg decarboxylase 2 [Actinosynnema mirum DSM 43827] gi|255923958|gb|ACU39469.1| Orn/DAP/Arg decarboxylase 2 [Actinosynnema mirum DSM 43827] Length = 397 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 50/367 (13%), Positives = 110/367 (29%), Gaps = 27/367 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +ID ++ GV + A+K + + L +S E Sbjct: 35 GTPCLVIDLPTVVERFRALRAAL--PGVGIFYAVKANPTREVVEVLAAEGCCFDVASPNE 92 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L E E +Y+ K A + ++ + + A + Sbjct: 93 IDLCLAEGAPPEAVSYSNPIKKAADIAYAHRLGVRLFVSDSEQDVRTIAEHAPGARVMLR 152 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S F P G+ FH + + A + Sbjct: 153 ILVESKGSTYPFGKKFGCAPDMA--VDLLRLAGELGLEPYGVAFHAGSQQLDPTGWDAAI 210 Query: 180 KNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230 + + + + ++LGGG+ + P ++ +++ + Sbjct: 211 ADAAEVTAKLRAEGVALSVVNLGGGLPAGYLEQPPPLAEYAAAMTDAVRRTFGEHAPSVM 270 Query: 231 LEPGEAIVTNTTTLNTTVLDI----SENIKNLVIVDSSVEAHVPDYLLYQ-ESATIYPNT 285 +EPG A+V + + ++V+ + + + V +D + + Sbjct: 271 IEPGRALVAESGVIRSSVVLVARKSYSDERRWVFLDIGRYGGLAETEGEAIAYPLRTTRD 330 Query: 286 GPYT--AMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINM 339 G T ++ G +C A D+ + ++ GD + Y + + FNG Sbjct: 331 GGETGPVVLAGPTCDADDVLYQHTRYDLPLDLRAGDHVDLLRAGAYTASYSSVAFNGFPP 390 Query: 340 PTIAVKN 346 Sbjct: 391 LATYCVR 397 >gi|114576089|ref|XP_001157142.1| PREDICTED: ornithine decarboxylase 1 isoform 7 [Pan troglodytes] Length = 472 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 119/399 (29%), Gaps = 44/399 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ R ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL---------------DISENIKNLVIVDSSVEAHVPDYL------- 273 V + TL ++ + +SS + + Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDGMYKGRITSCITENESSEQTFMYYVNDGVYGSF 337 Query: 274 ----LYQESATIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 P + + G +C D E + +GD + FE++ Sbjct: 338 NCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 397 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + FNG PTI + +++F D+ Sbjct: 398 GAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 436 >gi|218462257|ref|ZP_03502348.1| probable ornithine decarboxylase protein [Rhizobium etli Kim 5] Length = 377 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 46/359 (12%), Positives = 104/359 (28%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ + A+K A + L +S+ E+ Sbjct: 18 PCLVVDLDVVRDNFQAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ + A ++ ++ K A + Sbjct: 76 MALDAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + P + + + + G+ FH + + + L Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYGVSFHVGSQMTKVDAWDSAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + ++ F ++ +++GGG Q L+ Q Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFGNQIPQTI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + V+ IS+ N + + + + Y Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTEHD 311 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + IGD + E Y FNG Sbjct: 312 GDEM-EPCVIAGPTCDSADVLYEKKLYPLPISLSIGDEVLIEGTGAYTTTYSAVAFNGF 369 >gi|306920205|emb|CBX19979.1| ornithine decarboxylase [Nicotiana glauca] Length = 433 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 113/362 (31%), Gaps = 26/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ +D ++ A+KC L+ +S E+ Sbjct: 66 PFYVLDLGEVVSLMDQWKSAL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K A + +++ ++ K + K + ++ Sbjct: 124 YVLALGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSELLLRIK 183 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177 + + E ++ V+G+ FH N +A Sbjct: 184 PMFDGNARCPMGPKY-GALPEEVEPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAA 242 Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + E ++++ + +GGG V + F ++ + I EPG Sbjct: 243 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTAAAVAVKSALKQRFDDEPELTIIAEPGR 302 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPN------ 284 TL TT++ + S+ + D+ + + Sbjct: 303 FFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVQSNRSNVT 362 Query: 285 ---TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + V G +C A D + +++ D + F ++ Y + FNG N Sbjct: 363 CGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTSA 422 Query: 342 IA 343 I Sbjct: 423 IV 424 >gi|259481591|tpe|CBF75254.1| TPA: ornithine decarboxylase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 434 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 106/359 (29%), Gaps = 33/359 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + V+ A+KC + + + +G +S E+ + Sbjct: 61 FYVADMGEVYR--QHLRWKMNLSRVRPFYAVKCNPDPEVLRLMAKLGNGFDCASKAEIDM 118 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K + + +K KA ++ LRI Sbjct: 119 ALSTGVDPSRIIYAQPCKTKSYLRHAAKVGVKQMTFDNADELYKIKACYPEAELYLRILT 178 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S + + + + + G+ FH + F +++ Sbjct: 179 DDSNSLCQFSMKFGASLDVARQLLELAHQLELKIVGVSFHVGSGAEDPKAFLKAVQDARL 238 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIV 238 F ++ + +GGG + F L E Y I EPG V Sbjct: 239 VFDQAAEIGHELHTLDVGGGF----TGETFEKFAAVLDSALETYFPPNIRIIAEPGRYYV 294 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY---------- 288 TL ++ + ++ D + S I+ + P Sbjct: 295 GGAFTLAANIIARRGVQDPENPSKDAYMIYLNDGVYGNFSNIIFDHQHPEARILSCASEI 354 Query: 289 ---------TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 T + G +C D+ + + +GD + FE++ Y FNG Sbjct: 355 NGRPVSEDVTYSIWGPTCDGIDVISQRSVLPGLLDVGDWLYFEEMGAYTRCSATRFNGF 413 >gi|118380|sp|P27119|DCOR_MUSPA RecName: Full=Ornithine decarboxylase; Short=ODC gi|200124|gb|AAA39847.1| ornithine decarboxylase [Mus pahari] Length = 461 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 62/382 (16%), Positives = 117/382 (30%), Gaps = 33/382 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAATGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + S++ K K+ LRI Sbjct: 98 VQGLGVPPERIIYANPCKQVSQIKYAASSGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ V S + D+ + Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P+ Y++ + G +C D E + +GD + FE++ Y + + F Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNVDGTIKAIRE 356 NG P I + ++ Sbjct: 398 NGFQRPNIYYVMSRPMWQLMKR 419 >gi|28838469|gb|AAH47954.1| MGC52527 protein [Xenopus laevis] Length = 456 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 62/370 (16%), Positives = 120/370 (32%), Gaps = 39/370 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ VK A+KC ++ G+ L + G +S E+ L Sbjct: 39 FFVADLGDVVR--KHLRFLKALPRVKPFYAVKCNSSKGVVKILAELGAGFDCASKTEIEL 96 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E Y K + + +++ K + ++ LRI Sbjct: 97 VQDIGVAPERIIYANPCKQISQIKYAAKNGVQMMTFDNEVELSKVSRSHPNARMVLRIAT 156 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAMLKN 181 S S L+ + + + ++ +V G+ FH + + + Sbjct: 157 DDSKSSARLSVKFGAPLKSCRRLLEMAKNLSVDVIGVSFHVGSGCTDSKAYTQAISDARL 216 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGE 235 + + F ++ + +GGG T+ + + F E VQI EPG Sbjct: 217 VFEMASEFGYKMWLLDIGGGFPGTEDSKIRFEEIAGVINPALDMYFPESSDVQIIAEPGR 276 Query: 236 AIVTNTTTLNTTVLDIS-----------------ENIKNLVIVDSSVEAHVPDYLLYQES 278 V + +L V+ V S V D Sbjct: 277 YYVASAFSLAVNVIAKKEVEHSVSDDEENESSKSIMYYVNDGVYGSFNCLVFD----HAH 332 Query: 279 ATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + P YT+ + G +C D E + +GD + FE++ Y I + Sbjct: 333 PKPILHKKPSPDQPLYTSSLWGPTCDGLDQIAERVQLPELHVGDWLLFENMGAYTIAASS 392 Query: 333 WFNGINMPTI 342 FNG + Sbjct: 393 NFNGFQQSPV 402 >gi|300312040|ref|YP_003776132.1| diaminopimelate decarboxylase [Herbaspirillum seropedicae SmR1] gi|300074825|gb|ADJ64224.1| diaminopimelate decarboxylase protein [Herbaspirillum seropedicae SmR1] Length = 418 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 46/379 (12%), Positives = 105/379 (27%), Gaps = 38/379 (10%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ D+ L + A + L ++K + + Q +DG +S E+ Sbjct: 41 TPFYVYDRALLRARVAHLRAHLP-AELALHYSIKANPMPALVQAMAQLVDGFDVASGGEL 99 Query: 64 MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ E+ L+ + + + AQ+L + G+ Sbjct: 100 ATALDTPMPVQHISFTGPGKSLAELRRALAAGVMLHVESEREAEAVAALAQELGVRPGVT 159 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFLCFS 176 + + K G + + V C ++S + Sbjct: 160 LRINPPFELKSSGMRMGGGAKPFGVDAEAAPALLRWLAGQGVQVAGLQIFCGSQSLDAQA 219 Query: 177 AM------LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-- 228 M + + G + +++GGG + ++ + Sbjct: 220 IMAAQSSSFELALQLAGEAGLSLRVLNIGGGFGIPYFPGERALEIAPIGAHLAQWLPRLR 279 Query: 229 -------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VP 270 + +E G +V + V+D ++ + +V H + Sbjct: 280 ALHPQLRVVMEMGRYLVGEAGLYVSRVIDRKQSRGEVFLVVDGGLHHHLAASGNFGQVIR 339 Query: 271 ---DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + V G C D+ +GD + Y Sbjct: 340 KNYPVTIVPQQPQRSGGGTTERVSVVGPLCTPLDVLAAQMLLPAAAVGDLVVVFQSGAYG 399 Query: 328 INRKNW-FNGINMPTIAVK 345 ++ F G P + Sbjct: 400 LSASPTAFLGHPAPAEVLV 418 >gi|269960557|ref|ZP_06174929.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834634|gb|EEZ88721.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 483 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 52/393 (13%), Positives = 110/393 (27%), Gaps = 36/393 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+Y + +L ++L T A + +LK + ++Q G SL Sbjct: 69 IGTPFYAYSRAQLTHDLQTLKSTMPQA-LTFYYSLKANPNLSLVKIIHQQGVGCEVCSLT 127 Query: 62 EVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + D E+ + ++ ++++L + + A + K Sbjct: 128 ELETALNAGASVQDIIFVGPGKSDKELTRCVELGIKAVVVESLNELQRLETVASRAGKYQ 187 Query: 119 GLRINPSVS-YSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENK 170 + + S+ + + G + G+ + Sbjct: 188 AFAFRINPNFTSEKARLVMSGKPRQFGIDEDIVMAALNQLERYPHLTLTGIHVYLGTRIL 247 Query: 171 S----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-------- 218 +L + + ++ +GGG+ Sbjct: 248 DAQAVIENTRNILSLATRIEAKLDRPLGFVDVGGGLGIPYYPKEQFLDLDATALGLRPLI 307 Query: 219 -KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAH-------- 268 + ++ ++ +E G I+ + T V DI + K I D H Sbjct: 308 AQFKADHPETRLIMELGRYIIARSGVFITAVRDIKTSKGKTFAICDGGSNCHGAAAGLGS 367 Query: 269 -VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + T M+ G C D+ G+ ++ GD + Y Sbjct: 368 VIRKNFPIRRLGTPIEGEPREDYMITGPLCTPTDLIGDSVVLPQLQSGDLLGVFHSGAYG 427 Query: 328 INRKN-WFNGINMPTIAVKNVDGTIKAIREFSY 359 F P + D I+ R + Sbjct: 428 PTASPVNFLSFGQPAEVLIEGDTAIQIRRAECF 460 >gi|148230687|ref|NP_001079692.1| ornithine decarboxylase 2 [Xenopus laevis] gi|24636815|sp|Q9I8S4|DCOR2_XENLA RecName: Full=Ornithine decarboxylase 2; Short=ODC 2; Short=xODC2 gi|9653274|gb|AAF27628.2|AF217544_1 ornithine decarboxylase-2 [Xenopus laevis] Length = 456 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 62/370 (16%), Positives = 120/370 (32%), Gaps = 39/370 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ VK A+KC ++ G+ L + G +S E+ L Sbjct: 39 FFVADLGDVVR--KHLRFLKALPRVKPFYAVKCNSSKGVVKILAELGAGFDCASKTEIEL 96 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E Y K + + +++ K + ++ LRI Sbjct: 97 VQDVGVAPERIIYANPCKQISQIKYAAKNGVQMMTFDNEVELSKVSRSHPNARMVLRIAT 156 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAMLKN 181 S S L+ + + + ++ +V G+ FH + + + Sbjct: 157 DDSKSSARLSVKFGAPLKSCRRLLEMAKNLSVDVIGVSFHVGSGCTDSKAYTQAISDARL 216 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGE 235 + + F ++ + +GGG T+ + + F E VQI EPG Sbjct: 217 VFEMASEFGYKMWLLDIGGGFPGTEDSKIRFEEIAGVINPALDMYFPESSDVQIIAEPGR 276 Query: 236 AIVTNTTTLNTTVLDIS-----------------ENIKNLVIVDSSVEAHVPDYLLYQES 278 V + +L V+ V S V D Sbjct: 277 YYVASAFSLAVNVIAKKEVEHSVSDDEENESSKSIMYYVNDGVYGSFNCLVFD----HAH 332 Query: 279 ATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + P YT+ + G +C D E + +GD + FE++ Y I + Sbjct: 333 PKPILHKKPSPDQPLYTSSLWGPTCDGLDQIAERVQLPELHVGDWLLFENMGAYTIAASS 392 Query: 333 WFNGINMPTI 342 FNG + Sbjct: 393 NFNGFQQSPV 402 >gi|27382870|ref|NP_774399.1| ornithine decarboxylase [Bradyrhizobium japonicum USDA 110] gi|27356043|dbj|BAC53024.1| ornithine decarboxylase [Bradyrhizobium japonicum USDA 110] Length = 380 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 113/358 (31%), Gaps = 29/358 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + + +N T ++ A+K A + L ++++ E+ Sbjct: 21 PCLVVDLEVVRDNYQTFSKAL--PDSRVFYAVKANPAPEVLALLASMGSCFDTATVAEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ + A + +++ K A + Sbjct: 79 MALAAGATPDRISFGNTIKKERDIARAFALGIRLFAVDCAAEVEKIARAAPGAKVFCRIL 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + D + G+ FH + + + L Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVDVLDVAKRLGLEPCGISFHVGSQQRKVKAWDRALAM 196 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232 + F + +++GGG + + L++ + +E Sbjct: 197 ASQVFRDCAERGINLSMVNMGGGFPTKYLKDVPPVVTYGRSIFRALRKHFGNQIPETIIE 256 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V N + + V+ IS+ + ++ + + + Y Sbjct: 257 PGRGMVGNAGIIESEVVLISKKSDEDEVRWVYLDIGKFGGLAETMDESIRYAIRTAHDGA 316 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 ++ G +C + D+ E + ++IGD++ E Y + FNGI Sbjct: 317 DMT-PCVLAGPTCDSADVLYEKNPYPLPVTLEIGDKVLIEGTGAYTSTYSSVAFNGIP 373 >gi|145298270|ref|YP_001141111.1| ornithine decarboxylase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851042|gb|ABO89363.1| ornithine decarboxylase [Aeromonas salmonicida subsp. salmonicida A449] Length = 417 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 110/358 (30%), Gaps = 16/358 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P L+DK + + V+L ALK + L + ++ E Sbjct: 52 GSPLLLLDKAAVRKQYRAL--VAALPDVRLHYALKPLPHEAVVSVLKEEGACFDLATNGE 109 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V L + + K +F + L K K K+ LR Sbjct: 110 VDLVRSQGVRPGRCIHTHPIKRDSDIRYALEYGCTVFVYDNPLELEKFIPYKDEVKLLLR 169 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 ++ +K L+ ++ V GL FH + + Sbjct: 170 VSFPNPETKGDLSKKFGCTPEQALPLLQLAHAKGIKVMGLSFHVGSQVPHARRHVQAIDA 229 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEFSEKYSVQI--YLEPG 234 + + + +GGG ++ + FC ++E K + EPG Sbjct: 230 CREIMEQAWDLGLKPWVLDIGGGFPVDYDGGEFDIDGFCAPIREALAKLPATVQKIAEPG 289 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYT 289 I T ++V+ + + S + D++ Y S + Sbjct: 290 RFISPPAMTSISSVMGKAHRGDKIWYYLDDGLYGSYNGQLYDHVTYPVSTPYARGEQ-HN 348 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 +++ G +C + D+ E + IG+ + + Y + FN +I + + Sbjct: 349 SVLSGPTCDSVDVIREEIMLPDLAIGELVVGRVMGAYTWASASTFNFFPKASILILDS 406 >gi|149024091|gb|EDL80588.1| similar to ornithine decarboxylase (predicted) [Rattus norvegicus] Length = 421 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 103/356 (28%), Gaps = 19/356 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ + D L + T L A+KC + L G +S E+ Sbjct: 61 PFMVADLDVLASRHQTFLQALPRVW--PFYAVKCNNRPSLLLVLAALGTGFDCASQGELE 118 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + K + C + S+ K ++ LRI Sbjct: 119 QVLGLGVAPSRIIFANPCKAVSHIQYAARCGVQLLTFDSEEELTKLARHHPGARLILRIQ 178 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S F L + V G FH + + + + + Sbjct: 179 TLGGRSTFPLHTKFGARLLACGRLLQVARELGLAVVGASFHVGSDCHTPQSYRQAIADCH 238 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKD------FCQRLKEFSEKYSVQIYLEPG 234 + F Q+ + LGGG + + + F E V++ EPG Sbjct: 239 RVFEMGCKAGHQMSLLDLGGGFPGIEGSEAKFEEMARVVNAALAQYFPEGTGVEVIAEPG 298 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH------VPDYLLYQESATIYPNTGPY 288 + T ++ +++ + + +L + + + Sbjct: 299 RFYAESVCTAAVNIIAKKASLEPGGHRKLAYYLNEGHYGAFRIFLRDPVPRELPSDPHLF 358 Query: 289 TAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + G +C A D +F + +GD + F D+ Y + FNG + T+ Sbjct: 359 PCTLYGPTCDAFDRLFSTEVQLPELDVGDWLVFPDMGAYRSTMSSTFNGFPITTVY 414 >gi|196009165|ref|XP_002114448.1| hypothetical protein TRIADDRAFT_27475 [Trichoplax adhaerens] gi|190583467|gb|EDV23538.1| hypothetical protein TRIADDRAFT_27475 [Trichoplax adhaerens] Length = 391 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 63/377 (16%), Positives = 116/377 (30%), Gaps = 32/377 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+++ +L T L + V+ A+KC + TL+ G +S+ E+ Sbjct: 17 PFYIVNVGNILKKHKTWLSLLPR--VEPFYAVKCNDDRNVLATLSALGIGFDCASMAEIK 74 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + Y K + + + ++ K K K+ LR+ Sbjct: 75 AVLKLGVPPSKIVYANPCKQASHLKFAAKREVSMMTFDNEPELHKVKQLHPTAKLILRLL 134 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L + + NV G+ FH FS+ ++ + Sbjct: 135 TDDSKSLCRLGQKYGAPLKTVPNLLQVARNLDLNVVGISFHVGSGCYDASAFSSAVEIAK 194 Query: 184 KEFGH---FITQIEWISLGGGIH-FTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPG 234 F + Q + + +GGG ++ L + K+ +I EPG Sbjct: 195 TAFDYGKSMGFQFDILDIGGGFPGSPRATVSFEEISATLNKALNKHFPVESGVRIIAEPG 254 Query: 235 EAIVTNTTTLNTTVLDIS--------------------ENIKNLVIVDSSVEAHVPDYLL 274 V + L V+ V S + D+ + Sbjct: 255 RYYVASAFNLAVNVIAKRQVNDDNTQAQGKQHAYRNQKYMYYVNDGVYGSFNCLLYDHAI 314 Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 N Y++ + G +C D + + +GD + FED+ Y + F Sbjct: 315 VYPKTLGRDNEQQYSSSIWGPTCDGLDCVMKECMLPELDVGDWMYFEDMGAYTAAAASNF 374 Query: 335 NGINMPTIAVKNVDGTI 351 NG P + Sbjct: 375 NGFQKPLAYYVIEEKVW 391 >gi|71064610|ref|YP_263337.1| ornithine decarboxylase [Psychrobacter arcticus 273-4] gi|71037595|gb|AAZ17903.1| ornithine decarboxylase [Psychrobacter arcticus 273-4] Length = 391 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 131/373 (35%), Gaps = 34/373 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ ++D ++ + K+ A+K A + + L + +S+YE Sbjct: 24 ETPFLVVDLNRIKIKYHEMVGFF--PNAKIHYAMKASPAVEVINLLAELGSNFDCASIYE 81 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + +Y + A D ++ + L A + Sbjct: 82 LDRVLDCGVEASRISYGNTIKKPEHVKYAFDKGIDLYATDSEADLKNIAKHAPGSKIFVR 141 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I+++ + G+ FH + K + Sbjct: 142 ILVQ---GSETAEWPLSRKFGCHPNMAIELLIQAQELGLVPYGISFHVGSQQKDVAAWDD 198 Query: 178 MLKNIEKEFGHF----ITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFS-----EKYS 226 L ++ F +++ I+LGGG + P+K + + +K + + Sbjct: 199 ALAKVKYMFDWMKNEEGIKLQMINLGGGFPANYLSEVNPIKVYAEEIKSYLSDDYSAEDM 258 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQ-E 277 +I LEPG ++V + L + V+ IS + + + + + Y Sbjct: 259 PEIILEPGRSLVGGSGVLVSDVVLISRKSHTDLTRWVYTDVGLFQGLIETLGEAIKYPVY 318 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-W 333 + + +T T ++ G +C + DI E + + ++IGD+I + Y + + Sbjct: 319 TPKMETSTSAGTVVLAGPTCDSTDIMYEEAGYQLPEELEIGDKIFWLTTGAYTNSYSSIE 378 Query: 334 FNGINMPTIAVKN 346 FNG + N Sbjct: 379 FNGFPPLEVVYVN 391 >gi|307297673|ref|ZP_07577479.1| Orn/DAP/Arg decarboxylase 2 [Thermotogales bacterium mesG1.Ag.4.2] gi|306916933|gb|EFN47315.1| Orn/DAP/Arg decarboxylase 2 [Thermotogales bacterium mesG1.Ag.4.2] Length = 387 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 125/364 (34%), Gaps = 22/364 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 IKTP+ ++D + NN + V++ A+K + + +TL +S Sbjct: 14 IKTPFLIMDMDYVRNNY--FDIVSHVRNVQVFYAVKANSHPRIIETLRDLGSNFDVASRG 71 Query: 62 EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ E ++ + A D ++ ++ K A Sbjct: 72 EIEKLLALGISPERMSFGNTIKKVEDIAYAYSVGIDYYAVDSEMEVEKIAAHAPGSKVYG 131 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 + + + L+ + + + G+ FH +N + + Sbjct: 132 RIATSGGD--CDWPLSRKFGTDVGHVISIMEYADQLGLDAYGVSFHVGSQNYNVNSWDDA 189 Query: 179 LKNIEKEF---GHFITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQI---- 229 +++ + F + ++LGGG+ + VK + + +KY + Sbjct: 190 IRDASEVFKTLRAKNINLRMLNLGGGMPVKHVREIKSVKSYGDIINRALDKYMSFVPDLE 249 Query: 230 -YLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNT-- 285 ++EPG ++V N+ L + V+ S+ ++ V +D+ V + + + + Sbjct: 250 LFIEPGRSMVGNSAILVSQVILRSKKGSEDWVYIDAGVFHGLTETIEGFRYEVLTEGKVD 309 Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + + G +C + D + GD + F + Y FNGI+ P + Sbjct: 310 DTKISFHLAGPTCDSVDTIYHEIDLPKNIGYGDILYFINAGAYTTEYATNFNGIDAPRVL 369 Query: 344 VKNV 347 Sbjct: 370 FVED 373 >gi|296124036|ref|YP_003631814.1| ornithine decarboxylase [Planctomyces limnophilus DSM 3776] gi|296016376|gb|ADG69615.1| Ornithine decarboxylase [Planctomyces limnophilus DSM 3776] Length = 392 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 117/355 (32%), Gaps = 22/355 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP + + + N + GV+L A K + TL + S+ E Sbjct: 35 GTPLMCVSRSVVARNYEILQ--AGLPGVELFYAAKSNPDLTILRTLRRLGGSVDICSVGE 92 Query: 63 VMLGH-EKFGGET--HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + F E H + D + + +++ ++L K + + Sbjct: 93 LKAALQAGFTPEQMLHTHPCKTVDNLMTCYEAGVRLFVYDNATELKKVHRLTPDVGLLLR 152 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + ++ + S P + NV G+ FH + + L Sbjct: 153 VAMSSASSMINLSAKFGCAPSEA--VDLLRQARELGMNVRGISFHVGSQTLEPGDYDRAL 210 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKD------YPVKDFCQRLKEFSEKYSVQIY 230 + + F +E + +GGG+ ++ Q L+ V++ Sbjct: 211 AKVRQIFDDAACEGIDLEILDIGGGMPAPYREAIISLETYCDIVRQSLEIHFGDLPVRVI 270 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV------DSSVEAHVPDYLLYQESATIYPN 284 EPG I +T TL T+V+ S S V D+ + A + + Sbjct: 271 AEPGRVISADTQTLITSVIGKSVRPNGATQYIIDDGLYGSFSGKVYDHTDFNLMAENHLD 330 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + +V G +C + D+ ++IG+ I + Y + FNG+++ Sbjct: 331 RPCFPCVVAGPTCDSTDVVSRDQELPNLEIGELILVPSMGSYTNASGSTFNGLDL 385 >gi|322790208|gb|EFZ15207.1| hypothetical protein SINV_04085 [Solenopsis invicta] Length = 479 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 115/371 (30%), Gaps = 25/371 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D ++ K V+ A+KC + + L +S E+ Sbjct: 36 FYVLDIGDIVLKHQIWKE--KLPRVEPYYAVKCNDNLIVIEVLAALGINFDCASKNEINK 93 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + K + T+ + S+L+K K I +R Sbjct: 94 VLSLGVDSSRIIFANPAKPASHIRHAAAVRVETMTVDNESELHKIKKLFPSAKVVIRIRC 153 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + ++ + P R + NV G FH + F + + Sbjct: 154 DAEMAQCPLGMKFGCDP-VREAPNLLHLAYNLGLNVVGFSFHVGSGCQDPPVFYRAIHHC 212 Query: 183 EKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGE 235 + F + + LGGG DK + + + + ++Y + EPG Sbjct: 213 KMLFDMATDLGFKPYLLDLGGGYP-GDKGTSIDKIAEVINKALDEYFNTDAVHVIAEPGR 271 Query: 236 AIVTNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 V + TL T++ V S + D+ Sbjct: 272 FYVASAFTLATSIHSKRSIRGDSNAVTHNMYYINDGVYGSFNCLLYDHQHVTPIPLKNGC 331 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + V G +C D E +++G+ I FE++ Y + + FNG +P + + Sbjct: 332 GKMIASSVWGPTCDGLDRIVENIMLHDMELGEWIIFENMGAYTLPVASPFNGFPIPKVHI 391 Query: 345 KNVDGTIKAIR 355 + ++ Sbjct: 392 VADEDIWLLLK 402 >gi|86359219|ref|YP_471111.1| ornithine decarboxylase protein [Rhizobium etli CFN 42] gi|86283321|gb|ABC92384.1| probable ornithine decarboxylase protein [Rhizobium etli CFN 42] Length = 506 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 105/359 (29%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ + A+K A + L +S+ E+ Sbjct: 147 PCLVVDLDVIRENFHAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 204 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E +Y + A ++ ++ K A + Sbjct: 205 MALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 264 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + P + + + + G+ FH + + + L Sbjct: 265 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYGVSFHVGSQMTKVDAWDSAL 320 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + ++ F ++ +++GGG Q L+ Q Sbjct: 321 ADAKRVFVQLAKQGIHLQMVNMGGGFPTRYLRDVPSAEAYGKSIYQALRTHFGNQIPQTI 380 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + V+ IS+ N + + + + Y Sbjct: 381 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTERD 440 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD + E Y FNG Sbjct: 441 GDEM-EPCVIAGPTCDSADVLYEKNLYPLPLSLTIGDEVLIEGTGAYTTTYSAVAFNGF 498 >gi|290986807|ref|XP_002676115.1| predicted protein [Naegleria gruberi] gi|284089715|gb|EFC43371.1| predicted protein [Naegleria gruberi] Length = 1020 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 54/384 (14%), Positives = 107/384 (27%), Gaps = 40/384 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 P Y+ D + N + I G + A+K + G S+ Sbjct: 638 PLYVYDVDQFYANAQKLINISTKCGGPVDTIFFAIKSNPNVEILKIFEGIGFGLECVSID 697 Query: 62 EVMLGHEKFG---GETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 EV + F + + + +S + +++ L + + K Sbjct: 698 EVRMVCNLFPNIDKSRILFTPNFAPKKEYREAISLGVMLTIDSLYPLMNWSEL--LRGKS 755 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKS 171 + LRI+P + S+ G D ++ V GL H Sbjct: 756 VLLRIDPGAGKGHHAKVKTSGVQSKFGIHISDIPQAIELCEQFSITVMGLHAHVGSGILD 815 Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDY-----PVKDFCQR---LK 219 + ++ I GGG+ Y + + + K Sbjct: 816 EAEAWKKTATTLTQLISEYPKLAKDVKLIDCGGGLGVPYVPYKQTELDLGEVAKAMTEFK 875 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES 278 + +V++ +EPG + N L V I + +++ + + + L Sbjct: 876 LNNNPTNVKLCMEPGRFLTANAGVLLARVTQIKNKNFKLFIGIETGMNSLIRPTLYNSHH 935 Query: 279 ATI-----------YPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 + P A + G C +GD+FG + GD + Y Sbjct: 936 EIVNLSKISNPDSDDPAESTMVADIVGPICESGDVFGNDRPISSETREGDVLCICTAGSY 995 Query: 327 NINRKNWFNGINMPTIAVKNVDGT 350 + + +N Sbjct: 996 GFSMSSNYNNRAPAKEVFIPSSKK 1019 >gi|6979656|gb|AAF34583.1|AF212867_1 ornithine decarboxylase [Paracoccidioides brasiliensis] Length = 447 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 105/359 (29%), Gaps = 31/359 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + Q +G +S E+ Sbjct: 69 PFYVADLGQVYRQHIRWKKNLGR--VKPFYAVKCNPDPQILRLMVQLGNGFDCASKAEID 126 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + Y K S + +K K ++ LRI Sbjct: 127 YALDVGVDPSRIIYAQPCKTKSFLRYASQVGVKQMTFDNSDELYKIKEMCPDAELYLRIL 186 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + + NV G+ FH + F +++ Sbjct: 187 TDDSASLCRLSMKFGASLSVARSLLELAKELKLNVIGVSFHVGSGAEDPKSFVKAVEDSR 246 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L E+ + ++I EPG V + Sbjct: 247 FVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLSDALDEYFPPH-IRIIAEPGRYYVAS 305 Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278 TL V+ I N + + H Sbjct: 306 AFTLAANVIARRDVSLEMSDSDSTAGATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + P + G +C D+ E + +G+ + FE++ Y FNG Sbjct: 366 ESRVC--APIEYSIWGPTCDGIDLICERIALPELDVGNWLYFENMGAYTKCSATRFNGF 422 >gi|15644616|ref|NP_229669.1| ornithine decarboxylase [Thermotoga maritima MSB8] gi|148270058|ref|YP_001244518.1| Orn/DAP/Arg decarboxylase 2 [Thermotoga petrophila RKU-1] gi|281412061|ref|YP_003346140.1| Ornithine decarboxylase [Thermotoga naphthophila RKU-10] gi|4982459|gb|AAD36935.1|AE001824_4 ornithine decarboxylase [Thermotoga maritima MSB8] gi|147735602|gb|ABQ46942.1| ornithine decarboxylase [Thermotoga petrophila RKU-1] gi|281373164|gb|ADA66726.1| Ornithine decarboxylase [Thermotoga naphthophila RKU-10] Length = 388 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 56/363 (15%), Positives = 116/363 (31%), Gaps = 18/363 (4%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++KTP+ L D + K A + A+K + + L + +S Sbjct: 12 VVKTPFLLFDLSVVEKKYLEMKAALKKAD--IYYAVKANSHPRIISLLARLGSNFDVASK 69 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ G+ ++ K E A +F S++ K + Sbjct: 70 GEIEKLLALGVDGKRMSFGNTIKREEDIAFAYKNGIRLFAVDSEMEVEKVAINAPGSFVF 129 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+ + + + L+ + GL FH +N + + + Sbjct: 130 VRVETDGADADWPLSRKFGTNPEHALQLLSYASKMKLIPAGLSFHVGSQNLNPESWKKAI 189 Query: 180 KNIEKEFGH---FITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIY---- 230 + + F + +++GGG T +++ + ++E ++ ++ Sbjct: 190 EIAGRVFKKAMRSGLNLFLLNVGGGFPVQHTKPIPSMEEIGKAIEEAIDENLWFVHNLKV 249 Query: 231 -LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----DYLLYQESATIYPNT 285 EPG +V L T VL SE + + H Y+ Sbjct: 250 IAEPGRYMVGEAGWLVTKVLLKSERSGEKWVYIDAGVFHGLAETIQNFEYEIRVLGKERE 309 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + G +C + D+ + F + + D + F + Y + FNGI P + Sbjct: 310 ELEEYHLAGPTCDSVDVIYDRIFLPKSITLNDLVCFINAGAYTVEYNTRFNGIEPPKMVF 369 Query: 345 KNV 347 Sbjct: 370 IEE 372 >gi|227498854|ref|ZP_03928994.1| lysine decarboxylase [Acidaminococcus sp. D21] gi|226904306|gb|EEH90224.1| lysine decarboxylase [Acidaminococcus sp. D21] Length = 391 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 109/360 (30%), Gaps = 21/360 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ +++ N D ++ A+K + +T+ +S E Sbjct: 22 GTPLLVLSLEQIEKNYDILRTHIPQM--RIHYAMKANPDLRILETMIDKNADFDVASDGE 79 Query: 63 VM-LGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L GE Y K V + + F++ S++ K + Sbjct: 80 IRTLASLGVPGEKMIYANPIKTEAGLKACVDAGVTRMTFDSESEICKIAKWVPHATVLLR 139 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRI+ ++ L ++ G+ FH + + + Sbjct: 140 LRIDNPKAHVDLNKKFGAPREKAL--SLMRLARQAGLDMAGIAFHVGSQVTTADSYLHAF 197 Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEK--YSVQIYLE 232 + + + + +GGG + Y + ++ + I+ E Sbjct: 198 DVVHELLEEAKNEGFDLPIMDIGGGFPIPETGVHYNLTAILDQIAARLREDFSDKIIWSE 257 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP 287 PG + L T V+ ++E + + + D Y+ + P Sbjct: 258 PGRYMAGTAQNLITKVIGVNERNGQVWYFLDDGIYGTFSGVIFDQWDYKLISFKEGEKIP 317 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 T G SC + DI +P+++ D + Y FNG + + Sbjct: 318 ATF--AGPSCDSLDIMFRGKMTEPLEVDDLLLVPVCGAYTSASATTFNGFKKARMVIWED 375 >gi|73979729|ref|XP_856472.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 3 [Canis familiaris] Length = 436 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 112/358 (31%), Gaps = 16/358 (4%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K SN + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EFGH-----FITQIEWISLGGG----IHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 F ++ I + Y F + ++K ++ + Sbjct: 218 VFDMGITSVINPALDKYFPADSGVRVIAEPGRYYVASAFTLAVNIIAKKLVLKEQTDYSA 277 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295 + + ++ T + +++ + AHV L + Y+ + G Sbjct: 278 FLDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPD----EKYYSTSIWGP 333 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 +C D E + +GD + FE++ Y + + FNG PTI T + Sbjct: 334 TCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPTWQL 391 >gi|254502587|ref|ZP_05114738.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Labrenzia alexandrii DFL-11] gi|222438658|gb|EEE45337.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Labrenzia alexandrii DFL-11] Length = 376 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 113/365 (30%), Gaps = 30/365 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + + A+K A + + L +S+ E+ Sbjct: 17 PCVVVDLDIVRDNFEAFARSL--PDTSVYYAVKANPAPEILNLLENLGSSFDCASVGEIE 74 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + +Y + A + V ++ K A ++ R Sbjct: 75 MVLATGADASRISYGNTIKKERDIARAFEFGVRLFAVDCVEEVEKIARVA--PGSRVFCR 132 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ ++ D G+ FH + + + L Sbjct: 133 VLCDGVGAEWPLSRKFGCDPQMAPDVLDHAHRLGLEAYGVSFHVGSQQANLQAWDFALAM 192 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTD----KDYPVKDFC--QRLKEFSEKYSVQIYLE 232 F +++ +++GGG P Q L + +E Sbjct: 193 AAGVFREMALRGIELKMVNMGGGFPTRYLKDVPGVPRYGEAIFQALSKHFGNRLPSTIIE 252 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284 PG +V N + T V+ IS+ + + + + + + Y T Sbjct: 253 PGRGMVGNAGLIETEVVLISKKSETDEVRWVYLDIGKFHGLAETMDEAIRYP-IKTPRDG 311 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NM 339 ++ G +C + D+ E + + IGD++ E Y + FNG + Sbjct: 312 DRTAPCVLAGPTCDSVDVLYEKTPYELPVSLSIGDKVLIEACGAYTTTYSSVGFNGFAPL 371 Query: 340 PTIAV 344 + + Sbjct: 372 ASYVI 376 >gi|150397970|ref|YP_001328437.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium medicae WSM419] gi|150029485|gb|ABR61602.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium medicae WSM419] Length = 377 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ + A+K A + L +S+ E+ Sbjct: 18 PCLVVDLDVVRDNFKAFRHALPDSA--IYYAVKANPAPEVLRLLASLGSNFDCASVAEIE 75 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + +Y + A ++ ++ K A + Sbjct: 76 MALDAGATPNRISYGNTIKKERDVARAHTLGISLFAVDSHEEVEKIARAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + P + + + + G+ FH + + A L Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLASYGVSFHVGSQMTKLDAWDAAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + ++ F +++ +++GGG LK+ + Sbjct: 192 ADAKRVFVQLAKQGIELKMVNMGGGFPTKYLRDVPSAEAYGQAIFGALKKHFGNNIPETI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + V+ +S+ N + + + + Y T Sbjct: 252 IEPGRGMVGNAGVIKAEVVLVSKKSDNDSHRWVFLDIGKFGGLAETMDEAIRYPIR-TAR 310 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337 ++ G +C + D+ E + + IGD + E Y FNG Sbjct: 311 DADAMEPCVLAGPTCDSADVLYEKNMYPLPISLTIGDEVLIEGTGAYTTTYSAVAFNGF 369 >gi|307194296|gb|EFN76671.1| Ornithine decarboxylase [Harpegnathos saltator] Length = 473 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 56/373 (15%), Positives = 110/373 (29%), Gaps = 26/373 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D ++ K V+ A+KC + + L G +S E+ Sbjct: 36 FYVLDIGDIVRKHQIWKE--KLPRVEPYYAVKCNDNLIVIEVLAALGIGFDCASKGEINK 93 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + K + ++ K K KI LRI Sbjct: 94 VLSVGVDSSRIIFANPAKPASHIRHAAAMRVETMTVDNESELHKIKKLFPTAKIVLRIRC 153 Query: 125 SVSYSKFILADPNRPFSRL-GEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L + NV G+ FH + + +++ + Sbjct: 154 DAEIAQCPLGMKFGCDPITEAPNLLRLARALGLNVVGISFHVGSGCQDPPVYHRAIRHSK 213 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236 F + + +GGG K + + + ++Y + EPG Sbjct: 214 ILFDVAIDLGFKPYLLDIGGGYPGN-KGTSIDKMADTINQALDEYFNTDAVHVIAEPGRF 272 Query: 237 IVTNTTTLNTTVLD--------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 V + TL T++ V S + D+ Sbjct: 273 YVASAFTLATSIHSKRSVRGDDSSSGAITHNMYYINDGVYGSFNCLLYDHQHVTPLPLKD 332 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + + G +C D E +++GD I FE++ Y + + FNG +P + Sbjct: 333 GCGKLIPSSIWGPTCDGLDKVVENILLYDMELGDWILFENMGAYTLPVASPFNGFPVPKV 392 Query: 343 AVKNVDGTIKAIR 355 V + ++ Sbjct: 393 HVVADESIWLLLK 405 >gi|271498687|ref|YP_003331712.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech586] gi|270342242|gb|ACZ75007.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech586] Length = 446 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 105/398 (26%), Gaps = 35/398 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ ++L L A + +LK + TL + G S Sbjct: 38 VGTPFYVYSARQLRRQLQHLYQQLP-ADTAVYYSLKANPNLSVVKTLVEQGTGCEVCSPA 96 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y K + +C I+ +V++L+ A + Sbjct: 97 ELDTALAAGVLPQHILYVGPGKSLAALSHAMDCGIRAIVAESVTELDNINQLAAQAGTVQ 156 Query: 119 GLRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + + + + S+ + ++ G V G + Sbjct: 157 TVALRINPNFSSEHARLVMSGKPTQFGMTLDTLQTVLTCLSRWPSLAVRGFHVYLGTRIL 216 Query: 171 SFL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFS 222 + +L+ + ++++ +GGG + + Sbjct: 217 NAQAIANNTRNILQLALNLRDQYQLTLDFVDIGGGFGVPYFPKETPLDLPALGDAIAPIV 276 Query: 223 EKYSV-----QIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAH-------- 268 + QI +E G +V T V + K I D H Sbjct: 277 ADFRRQATNTQIIIELGRYLVAEAGLFVTRVNTLKTAGGKTFAICDGGANCHSAAAGLNS 336 Query: 269 VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + + V G C D+ G+ + + D I Y + Sbjct: 337 MLRKNFPLLRLGDNHSRPVQPYQVSGPLCTPTDLLGDNVLLPTLAVNDLIGIAHSGAYGL 396 Query: 329 NRKNW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 F P + + I+ + + Sbjct: 397 TASPGLFLSFGYPAEVMVDGHRLIQIRQPETTAQLLAR 434 >gi|5738966|dbj|BAA83427.1| ornithine decarboxylase [Nicotiana tabacum] Length = 432 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 112/362 (30%), Gaps = 26/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ +D ++ A+KC L+ +S E+ Sbjct: 65 PFYVLDLGEVVSLMDQWKSAL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 122 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K A + +++ ++ K + K + ++ Sbjct: 123 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSELLLRIK 182 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177 + + E ++ V+G+ FH N +A Sbjct: 183 PMFDGNARCPMGPKY-GALPEEVEPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAA 241 Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + E ++++ + +GGG V + F ++ + I EPG Sbjct: 242 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVRSALKQHFDDQPELTIIAEPGR 301 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA---------TI 281 TL TT++ + S+ + D+ + Sbjct: 302 FFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVLSNRTNVT 361 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + V G +C A D + +++ D + F ++ Y + FNG N Sbjct: 362 CGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTCA 421 Query: 342 IA 343 I Sbjct: 422 IV 423 >gi|261338624|ref|ZP_05966508.1| diaminopimelate decarboxylase [Bifidobacterium gallicum DSM 20093] gi|270276343|gb|EFA22197.1| diaminopimelate decarboxylase [Bifidobacterium gallicum DSM 20093] Length = 479 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 55/442 (12%), Positives = 110/442 (24%), Gaps = 80/442 (18%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P Y+ID ++ + N + A K F + + Q + Sbjct: 34 GSPLYVIDTDEVRDRARAFVEAAANAFHNTTTHVSFAGKAFLCKEIVRIVVQQGMFVDTC 93 Query: 59 SLYEVMLGHE-KFGGETHAYNVAYKDCEIDA--VLSNCDTIIFN--TVSQLNKFKDKAQK 113 SL E+ + G + K + + I+ + + + Sbjct: 94 SLGEMTIALAAGVPGRRLVLHGNNKSDAEIELAIREGFNKIVIDEPNEAARIAAIAQRLG 153 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC------------------------KD 149 ++ LR+ + + G + Sbjct: 154 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVALLPVNADLQVVDSVVERIGGHMGDSPE 213 Query: 150 KI--------------------ESEIKNVNGLMFHNNCENK----SFLCFSAMLKNIEKE 185 + ++ + G+ H M+ + Sbjct: 214 LLEALNIIAQGPAIAALQGIAEHADWLELVGVHSHIGSNIHDAEAFIQAARRMMLLRKTF 273 Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------RLKEFSEKYSVQIYLEPG 234 + + LGGG D + + I EPG Sbjct: 274 HAVAGYLMPEVDLGGGYSVAYTDGEDLMDVDRELSRLAASVSAVNRALGMPAPTISFEPG 333 Query: 235 EAIVTNTTTLNTTV-------LDISENIKNLVIVDSSVEAHVPDYLLYQES----ATIYP 283 IV V L + + V VD + ++ L + A Sbjct: 334 RWIVAPAGVTLYRVGTVKTVELSVDPAERTYVSVDGGMSDNIRPALYGADYTAVLANRES 393 Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 P + V G C +GDI F + GD ++ Y + +N +P + Sbjct: 394 TAAPRLSRVVGIHCESGDIVVNNVFLPDDITRGDVLAVPVTGAYGRTMASNYNQQLIPAV 453 Query: 343 AVKNVDGTIKAIREFSYNDYYN 364 + +G +R + D + Sbjct: 454 VGVSSEGAHVMMRRQTLEDLLD 475 >gi|271501109|ref|YP_003334134.1| diaminopimelate decarboxylase [Dickeya dadantii Ech586] gi|270344664|gb|ACZ77429.1| Diaminopimelate decarboxylase [Dickeya dadantii Ech586] Length = 417 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 54/377 (14%), Positives = 104/377 (27%), Gaps = 32/377 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D L ++ + GV+L A+K + + D + + G SS E+ Sbjct: 25 AFVYDLAALRQHVSEVMAALP-PGVELYYAIKANSEKPILDAIAPLVHGFEISSGGEIDR 83 Query: 66 GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + ++ A+ + + + ++ + + +AQ+ + I Sbjct: 84 VAGCATAKPFVFSGPGKLDSDFDLALEHGVEAVHVESRHEIARLQQRAQQHGVVQPVFIR 143 Query: 124 PSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + L + +D + + G H S Sbjct: 144 INPELASSLTSKLAMAGTPTPFGMDEADLPDAVRDVDNASHLQLKGFHVHAMSHQMSVER 203 Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225 +L + + QI +++GGGI + + C L+ + Sbjct: 204 HQQLLDLYLTRWPQWKALSAHPQQITHLNVGGGIGVPYLTPERFDWSALCDYLRVRLAQQ 263 Query: 226 SVQIY--LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 EPG I VLD + +V + I+ Sbjct: 264 PDVPVVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVCRGGTHQFRLPVAQGHDHPIIH 323 Query: 283 PNTGP-------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334 P V G+ C D+ V IGD + Y N + F Sbjct: 324 LPLAPAQPAGETRDWTVVGQLCTPKDVLSRDQRLTDVNIGDLLVLPLAGAYGYNISHADF 383 Query: 335 NGINMPTIAVKNVDGTI 351 P G I Sbjct: 384 LCHPRPAQYFITDAGVI 400 >gi|6981302|ref|NP_036747.1| ornithine decarboxylase [Rattus norvegicus] gi|118382|sp|P09057|DCOR_RAT RecName: Full=Ornithine decarboxylase; Short=ODC gi|56787|emb|CAA30765.1| ornithine decarboxylase [Rattus norvegicus] gi|205804|gb|AAA41737.1| ornithine decarboxylase (EC 4.1.1.17) [Rattus norvegicus] gi|205808|gb|AAA66164.1| ornithine decarboxylase [Rattus norvegicus] gi|51261226|gb|AAH78882.1| Ornithine decarboxylase 1 [Rattus norvegicus] gi|149050981|gb|EDM03154.1| ornithine decarboxylase 1 [Rattus norvegicus] gi|225925|prf||1403320A Orn decarboxylase Length = 461 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 62/382 (16%), Positives = 118/382 (30%), Gaps = 33/382 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDVLK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + S++ K K+ LRI Sbjct: 98 VQGLGVPPERIIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDISE-------------------NIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ V S + D+ + Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQTGSDDEDESNEQTLMYYVNDGVYGSFNCILYDHAHVK 337 Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P+ Y++ + G +C D E + +GD + FE++ Y + + F Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCSLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNVDGTIKAIRE 356 NG P I + +++ Sbjct: 398 NGFQRPNIYYVMSRSMWQLMKQ 419 >gi|303239984|ref|ZP_07326506.1| Orn/DAP/Arg decarboxylase 2 [Acetivibrio cellulolyticus CD2] gi|302592463|gb|EFL62189.1| Orn/DAP/Arg decarboxylase 2 [Acetivibrio cellulolyticus CD2] Length = 412 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 117/399 (29%), Gaps = 36/399 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + +T ++ + K G+ + G +S+ E Sbjct: 14 GTPSYMYDGDCIEKQYNTLRSFLPE-NFQIFYSAKANPLLGICQIMKNMGSGIEVASVGE 72 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L F E + K + AV SN I + A++ K + Sbjct: 73 LYLAQKAGFTPEQIIFTSPGKTAQELIYAVESNIYCINIECTEEAVLLNQIAEERSKIVN 132 Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE--- 168 + + + ++ + + S+ G + + G+ + + Sbjct: 133 IAVRVNPDFNLQGSRIKMSGVSSQFGIDQGEVKNAFETLKTLANIKLIGIHVYCGTQVLS 192 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 CF +K F +E++ LGGG LK+ K Sbjct: 193 SQSLLECFEEEIKLALALSDEFDFSLEFLDLGGGFGIPYFKNEYPLDIVLLKDGMSKLIR 252 Query: 228 QI---------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-------PD 271 +E G ++ T VL + + + IV H Sbjct: 253 NYGTRLEKTRVAVESGRFLLAECGLYLTKVLYVKKCKGSKFIVCDGGSNHHASSAFLGRH 312 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + + V G C D+ G+ ++ D I+ E Y + Sbjct: 313 VRNNFPMRVLEKSENCEEVTVVGPLCTPTDVIGQKVLLPTIETEDIIAIEKSGAYGLTHS 372 Query: 332 N-WFNGINMPTIAVKNVDGTIKAIREFS-YNDYYNN-LS 367 F MP I + + G I RE D+ N LS Sbjct: 373 PVMFLSHEMP-IELVSYKGEINVARERGRKEDFLKNQLS 410 >gi|311258828|ref|XP_003127815.1| PREDICTED: ornithine decarboxylase-like [Sus scrofa] Length = 459 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 54/371 (14%), Positives = 98/371 (26%), Gaps = 37/371 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ + + L V A+KC + L G +S E+ Sbjct: 66 PFMVANLDVLPRRHQLFHQALPR--VSPFYAVKCNNNPWVLRVLAALGTGFDCASQGELE 123 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 Y K ++ + S+ K ++ LR+ Sbjct: 124 QVLGLGVPPSRIIYANPCKPVSHILYAAHHGVQLLTFDSEEELIKVAQHYPGARLVLRLW 183 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN-------------NCENK 170 S S F L+ L E V G Sbjct: 184 TQDSESIFSLSTKFGARLELCEHLLKSARDLGVAVVGTSTGTADSERTXXXXXGXXXPAT 243 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEFSEKYS 226 + A + + + + ++ +GGG + P + ++F E Sbjct: 244 TVQQAIADCRCLFEMGLRIGHDMNFLDIGGGFPGEEGLDPKFEEXVINATLAQDFPEGSG 303 Query: 227 VQIYLEPGEAIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDYLLYQ 276 V+I EPG T+ ++ + D Sbjct: 304 VEIIAEPGRFYAAPVCTIAVNIIAKKAVVQPGGHRKLLYYLNDGYYGDFRVFLRDPE--P 361 Query: 277 ESATIYPNTGPYT----AMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + + GP ++ G +C A D +F E + +GD + F + Y Sbjct: 362 KIPIVVKELGPEPPLFSCILFGPTCDAFDKLFLEELQLPELNVGDWLVFPTMGAYTNVMT 421 Query: 332 NWFNGINMPTI 342 + FNG +I Sbjct: 422 STFNGFPPASI 432 >gi|288574389|ref|ZP_06392746.1| Ornithine decarboxylase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570130|gb|EFC91687.1| Ornithine decarboxylase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 395 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 62/369 (16%), Positives = 119/369 (32%), Gaps = 28/369 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP L+D + + N D K+ A+K + L + +S+ E Sbjct: 32 ETPCLLLDLKSVERNFDDLTRTMPY--AKIHYAVKANPHEAILRMLIRKGCNFDFASINE 89 Query: 63 V--MLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + ML + E +Y + A ++ L + A Sbjct: 90 LDTMLALD-TSPERLSYGHTIKKSEHIAYAYEKGVRLFATDSEDDLRRIAKNAPGSQVFF 148 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 L + S + P + K + GL FH + + + Sbjct: 149 RLFMECSGADWSLSRKFGAHPDTIF--KLIRLSKELDVIPWGLSFHVGSQQRDIGQWGNA 206 Query: 179 LKNIEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQI 229 + + F Q++ I+LGGG P++ + + + F + +I Sbjct: 207 IASCRYLFDSAKELGIQLKLINLGGGFPAKYIQPTVPLEIYAKEVTRFLSEDFPEGIPEI 266 Query: 230 YLEPGEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 +EPG ++V + L T V+ + L I + Sbjct: 267 IIEPGRSLVGDCGILTTQVVLKSKKESYNPYSWLYIDAGKFGGLYETIDESIKYPIYSEK 326 Query: 285 TGP-YTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINM 339 GP ++ G +C + D+ ++ K ++ GD++ F Y + FNG Sbjct: 327 QGPVEEYIIAGPTCDSLDVLYERDKYMLPKNLEEGDKLYFFSTGAYVNSCSLESFNGFKP 386 Query: 340 PTIAVKNVD 348 P + V + D Sbjct: 387 PKVYVYDED 395 >gi|170288742|ref|YP_001738980.1| Orn/DAP/Arg decarboxylase 2 [Thermotoga sp. RQ2] gi|170176245|gb|ACB09297.1| Orn/DAP/Arg decarboxylase 2 [Thermotoga sp. RQ2] Length = 388 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 115/363 (31%), Gaps = 18/363 (4%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++KTP+ L D + K A + A+K + + L + +S Sbjct: 12 VVKTPFLLFDLSVVEKKYLEMKAALKKAD--IYYAVKANSHPRIISLLARLGSNFDVASK 69 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ G+ ++ K E A +F S++ K + Sbjct: 70 GEIEKLLALGVDGKRMSFGNTIKREEDIAFAYKNGIRLFAVDSEMEVEKVAINAPGSFVF 129 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+ + + + L+ + GL FH +N + + + Sbjct: 130 VRVETDGADADWPLSRKFGTNPEHALQLLSYASKMKLIPAGLSFHVGSQNLNPESWKKAI 189 Query: 180 KNIEKEFGH---FITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIY---- 230 + + F + +++GGG T +++ + ++E ++ ++ Sbjct: 190 EIAGRVFKKAMRSGLNLFLLNVGGGFPVQHTKPIPSMEEIGKAIEEAIDENLWFVHNLRV 249 Query: 231 -LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----DYLLYQESATIYPNT 285 EPG +V L T VL SE + + H Y+ Sbjct: 250 IAEPGRYMVGEAGWLVTKVLLKSERSGEKWVYIDAGVFHGLAETIQNFEYEVRVLGKERE 309 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + G +C + D+ + + + D + F + Y + FNGI P + Sbjct: 310 ELEEYHLAGPTCDSVDVIYDRILLPKSITLNDLVCFINAGAYTVEYNTRFNGIEPPKMVF 369 Query: 345 KNV 347 Sbjct: 370 IEE 372 >gi|93004868|ref|YP_579305.1| ornithine decarboxylase [Psychrobacter cryohalolentis K5] gi|92392546|gb|ABE73821.1| ornithine decarboxylase [Psychrobacter cryohalolentis K5] Length = 391 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 56/373 (15%), Positives = 131/373 (35%), Gaps = 34/373 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ ++D ++ + K+ A+K A + + L + +S+YE Sbjct: 24 ETPFLVVDLNRIKIKYHEMVGFF--PHAKIHYAMKASPAVEVINLLAELGSNFDCASIYE 81 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + +Y + A D ++ + L A + Sbjct: 82 LDRVLDCGVEPSRISYGNTIKKPEHVKYAFEKGVDLYATDSEADLKNIAKHAPGSKIFVR 141 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I+++ + G+ FH + K + Sbjct: 142 ILVQ---GSDTAEWPLSRKFGCHPNMAIELLIQAQELGLVPYGISFHVGSQQKDVAAWDD 198 Query: 178 MLKNIEKEFGHF----ITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFS-----EKYS 226 L ++ F +++ I+LGGG + P+K + + ++ + + Sbjct: 199 ALAKVKYMFDWMKNEEGIKLQMINLGGGFPANYLSEVNPIKVYAEEIQSYLSDDYSAEDM 258 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQ-E 277 +I LEPG ++V + L + V+ IS + + + + + Y Sbjct: 259 PEIILEPGRSLVGGSGVLVSDVVLISRKSHTDLTRWVYTDVGLFQGLIETLGEAIKYPVY 318 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-W 333 + + +T T ++ G +C + DI E + + ++IGD+I + Y + + Sbjct: 319 TPKMETSTSAGTVVLAGPTCDSTDIMYEEAGYQLPEELEIGDKIFWLTTGAYTNSYSSIE 378 Query: 334 FNGINMPTIAVKN 346 FNG + + Sbjct: 379 FNGFPPLEVVYVD 391 >gi|170045392|ref|XP_001850295.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167868455|gb|EDS31838.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 440 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 78/376 (20%), Positives = 130/376 (34%), Gaps = 32/376 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++L+D ++ ++R+ VK A+KC + TL G +S E+ Sbjct: 40 PFHLLDLDDVVR--KHLNWLRELPRVKPFYAVKCNDDESIVKTLALLGTGFDCASKGEIS 97 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 G E Y K E N ++ K ++ LRI Sbjct: 98 QVLGLGVGAERIIYAHPIKAKESLVFARNNGVGKVTFDNECELKKVAKYYPEAELVLRIR 157 Query: 124 PSVSYSKFILADPNRPFSRL-GEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 L +RL G + K + NV G+ FH C + CF +K+ Sbjct: 158 HDSDKVLISLGKKFGCDARLDGPELIRKAQELGLNVIGVSFHVGCGSLDADCFYNAIKSA 217 Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPG 234 + F + + +GGG D D P+ +F + +++ Q+ EPG Sbjct: 218 KFLFEFADTVGYRFSLLDIGGGFP-GDVDKPIGEFATAINRALDEFFPNLDGIQVIAEPG 276 Query: 235 EAIVTNTTTLNTTVL---------DISENIKNLVIVDSSVEAHVPDY-------LLYQES 278 V + L T+ D S ++ + ++ V + D+ L + Sbjct: 277 RYYVGSAVRLLATINGKKIIRDPADSSRILQVMYYINDGVFGTLFDWVSLRAINDLSRAI 336 Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 I + V G +C + DI E IG+ + FE++ Y I FN Sbjct: 337 PIITKQKREKVQFKTTVWGPTCDSTDIVCEDVDFPEHDIGEYLLFENIGAYGITFATNFN 396 Query: 336 GINMPTIAVKNVDGTI 351 G PTI + T Sbjct: 397 GFPKPTIQIYVKKQTW 412 >gi|311113374|ref|YP_003984596.1| diaminopimelate decarboxylase [Rothia dentocariosa ATCC 17931] gi|310944868|gb|ADP41162.1| diaminopimelate decarboxylase [Rothia dentocariosa ATCC 17931] Length = 504 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 54/446 (12%), Positives = 112/446 (25%), Gaps = 84/446 (18%) Query: 3 KTPYYLIDKQKLLNNLD----TALYIRKNAGVKL--LLALKCFAAWGMFDTLNQYMDGTT 56 TP Y+ + G ++ A K F + ++ Sbjct: 54 DTPQYVFSEDTFRARARGYRQAFKDAFARYGAQVSVYYAGKSFLCTSVARWAHEEGLCLD 113 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA-- 111 ++S E+ + + G+ A + K A+ ++ ++V +L D Sbjct: 114 TASGGELAIALRAQVPGQNIALHGNNKSHGEIVRAIKHGVGRVVADSVDELKLIADVHAE 173 Query: 112 -----------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGE------------KCK 148 + +RI P V S + G + Sbjct: 174 LNAERAAAGQEPYPAVPVLIRITPGVHASTHESIATAHEDQKFGMSLQPGTARLAGLEAD 233 Query: 149 DKIESEIKN-------------------VNGLMFHNNCENKSFLCFSAMLK----NIEKE 185 + G+ H + F + Sbjct: 234 ELEYWSTTEDESYAMLAAGILTATDSLEFRGIHCHIGSQIFEAQGFEQAADTALTFMHAV 293 Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-----------SVQIYLEPG 234 + + + LGGG + +++ + EPG Sbjct: 294 NQKYGLSLPELDLGGGYGIGYTEADTPRSIEQITVSIADAVAATCVRLGLAIPHMSFEPG 353 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDS----------SVEAHVPDYLLYQESATIYPN 284 +I + TV I + + L + A N Sbjct: 354 RSISGPSGVTLYTVGTIKNVSIEDEHGQIRVRRYVSVDGGMSDNARPVLYDADYAVTLAN 413 Query: 285 TGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINM 339 P + V G+ C +GDI + + ++ GD ++ Y + +N ++ Sbjct: 414 RAPAGEHVLSRVVGKHCESGDIVVRYCYLPADLRAGDILAVPATGAYCYVLGSNYNYLSR 473 Query: 340 PTIAVKNVDGTIK-AIREFSYNDYYN 364 P + + IR S ++ Sbjct: 474 PPVIATSAGEAAHPIIRRQSEDEMLA 499 >gi|300114365|ref|YP_003760940.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus watsonii C-113] gi|299540302|gb|ADJ28619.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus watsonii C-113] Length = 410 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 45/375 (12%), Positives = 103/375 (27%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y +++ + + + + + ALK + + +DG +S+ E+ Sbjct: 37 TPFYAYERRLISERIRHLRAHLP-SEIYIHYALKANPMPALAGHIAPLVDGLDVASIGEL 95 Query: 64 MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + +T ++ D E+ L+ I + ++ + A+K + + Sbjct: 96 KIALDAGISPKTISFAGPGKSDAELRTSLAAGIIINMESEGEMERIAHLAEKQGYRPKVA 155 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171 + + + K G + + + + G + +N Sbjct: 156 VRVNPNFELKTSGMKMAGGPKPFGIDAERVPAMLARLSALDLDFQGFHIFSGSQNLRAEA 215 Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF---------CQRLKEF 221 + + +++GGG K Sbjct: 216 IIEAQERTFTLALELARSAPAPVRLLNIGGGFGIPYFPGDKPLDLRPIADNLAASLPKVQ 275 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272 + ++ LE G +V V+D + ++ ++ + H Sbjct: 276 QQLPEAEVTLELGRYLVGEAGIYVCEVIDRKISRGHVFLITNGGLHHHLAASGNFGQVIR 335 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + A V G C DI ++GD I Y + Sbjct: 336 KNYPVVVGNRVQGSDREIASVVGPLCTPLDILAHRMDLAQAEVGDLIVVFQSGAYGRSAS 395 Query: 332 N-WFNGINMPTIAVK 345 F G P + Sbjct: 396 PLGFLGHPAPAEVLV 410 >gi|116515197|ref|YP_802826.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116257051|gb|ABJ90733.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 416 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 61/395 (15%), Positives = 123/395 (31%), Gaps = 41/395 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP ++ + + + + A K + + + + + SL E Sbjct: 25 KTPIWIYNSEI-----IKKQIKKLKKFDIIRFAQKSCSNIHILKLMRKKNIKIDAVSLGE 79 Query: 63 VMLGH-EKFGGET--HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + F + + + ++ + + ++ L K K+ L + Sbjct: 80 IERALLAGFKPKNNNIVFTSDIIENKVLKKVIKYKIPVNAGSIDMLKKIGKKS--LKHPV 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK----CKDKIESEIKNVNGLMFHNNCENKSFLC 174 +RINP I + S+ G I+ N+ GL H K+ Sbjct: 138 WIRINPKFGDGHHIKTNTGGENSKHGIWNPKKALSVIKKYKLNLIGLHIHIGSGIKT-KN 196 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224 + ++K T+I++IS GGGI K + + +K Sbjct: 197 LHKVCNAMKKYAIKLKTKIKFISAGGGISIPYKSKEKEINIKDYFSQWDKTKKKISSILN 256 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 S+Q+ +EPG + + L V I V+++S + L Sbjct: 257 CSIQLEIEPGRFLTAQSGILIAKVYAIKKMGKNIFVLINSGFNDLIRPILYGSYHKITVF 316 Query: 284 NTGPYT-------AMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFEDVAGYNIN 329 + + C +GD+F VK+GD I D Y + Sbjct: 317 HKKKSKKKRKKIKTIFAEPLCESGDVFTIKKNEIIFHRKIPQVKLGDYIIIHDTGAYGSS 376 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + +N + + ++ R + + + Sbjct: 377 MSSNYNSRPFIPEILYKKNNFVQIRRRQTIKEMLS 411 >gi|37787285|gb|AAO92750.1| ornithine decarboxylase [Paralichthys olivaceus] Length = 460 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 60/367 (16%), Positives = 114/367 (31%), Gaps = 34/367 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L ++R + A+KC + + TL G +S E+ L Sbjct: 40 FYVCDLGDVLK--KHLRWMRALPRITPFYAVKCNDSRAVVTTLASLGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K S + S++ K + K+ LRI Sbjct: 98 VQSLGVDPSRIIYANPCKQVSQIKYASAHGVQMMTFDSEVELMKVARCHDNAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + NV G+ FH + + + Sbjct: 158 DDSKAVCRLSVKFGAPLKACRGLLERAKELGLNVIGVSFHVGSGCTDSKTYMQAIADARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPGE 235 F ++ + +GGG +D K FS V+I EPG Sbjct: 218 VFHMGDELGFNMDLLDIGGGFPGSDNVELKFEEITAVINSALDKYFSADSGVKIIAEPGR 277 Query: 236 AIVTNTTT-----LNTTVLDISENIKNLVIVDSSVEAHVPDYL-----------LYQESA 279 V + T + V+ +++ + ++ + Sbjct: 278 FYVASAYTLVVNIIAKKVIMDEDSVSDDEDEGTNDRTLMYYVNDGVYGSFNCILYDHAHC 337 Query: 280 TIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + P Y + G +C D E + +++GD + FE++ Y + + Sbjct: 338 MPILHKKPKPDEIMYPCSIWGPTCDGLDRIVEQCYLPDMQVGDWLVFENMGAYTVAASST 397 Query: 334 FNGINMP 340 FNG P Sbjct: 398 FNGFQRP 404 >gi|156543044|ref|XP_001604390.1| PREDICTED: similar to ornithine decarboxylase [Nasonia vitripennis] Length = 400 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 110/360 (30%), Gaps = 28/360 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D ++ K V A+KC + + + L G +S E+ Sbjct: 36 FYVLDVGDIVQKHQIWKE--KLPRVDPFYAVKCNDSLTVLEVLASLGVGFDCASKNEINK 93 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + K D + + S+L+K K + +R Sbjct: 94 VLDIGVDSSRIIFANPAKPASHIRHAAAVGVDLMTVDNESELHKIKKLFPTAKVVLRIRC 153 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + V+ + + P + +V G+ FH + F+ + + Sbjct: 154 DSEVAQCQLGMKFGCDPTFEAPSLLR-LARLLDIDVVGISFHVGSGCQDPPVFNRAICHA 212 Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGE 235 + F + + LGGG ++ + ++Y I EPG Sbjct: 213 KNLFDLAVDIGFKPYLLDLGGGYPGNKGS-SIEKIADVINHALDEYFPTDDVHIIAEPGR 271 Query: 236 AIVTNTTTLNTTVLD--------------ISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 V + TL T + V S + D+ Sbjct: 272 FYVASAFTLATAIHSKRSVRADGNSPGNVTHTMYYINDGVYGSFNCLLYDHQHVTPIPLR 331 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + + G +C D E +++GD I FE++ Y + + FNG +P Sbjct: 332 PGHGKMIPSSIWGPTCDGLDQVVENVLMHEMELGDWIIFENMGAYTLPVASPFNGFPIPK 391 >gi|294101351|ref|YP_003553209.1| Orn/DAP/Arg decarboxylase 2 [Aminobacterium colombiense DSM 12261] gi|293616331|gb|ADE56485.1| Orn/DAP/Arg decarboxylase 2 [Aminobacterium colombiense DSM 12261] Length = 395 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 58/367 (15%), Positives = 115/367 (31%), Gaps = 30/367 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP +ID + D+ K+ A+K + L + +S+YE Sbjct: 31 ETPCLIIDLDVIEKQYDSLKK--GMPFAKIYYAVKANPLDDVVKLLVEKGSCFDIASVYE 88 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + +Y K + A ++ S L K A Sbjct: 89 LNQVLALGATPDRISYGNTIKKAKDIAYAYEKGVRLFATDSESDLYKLAKHAPGSKVFFR 148 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + S + P + K + S+ + G+ FH + + + Sbjct: 149 ILTDGSGADWPLSRKFGAHPDTLY----KLILMSKELGLEPYGVSFHVGSQQRDLGQWDH 204 Query: 178 MLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQ 228 + + F +++ I+LGGG V + LKE + + Sbjct: 205 AISTCKYLFDSVAEKGIRLKMINLGGGFPSQYIYPTVGAEVYGTEITRYLKEDFGENLPE 264 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISE-----NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 I LEPG + + + T V+ IS + + + + + Sbjct: 265 IILEPGRYMAGDAGVMVTEVVLISRKSEFGQYRWIYLDAGKFGGLIETLDESIKYPIYVE 324 Query: 284 NTG-PYTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 G A++ G +C + DI ++ ++ GDR+ Y + + FNG Sbjct: 325 KKGIVQEAIIAGPTCDSMDILYEQYKYELPLTLEEGDRVYILTTGAYTQSYSSVYFNGFP 384 Query: 339 MPTIAVK 345 + Sbjct: 385 PLAAYIL 391 >gi|148237898|ref|NP_001080167.1| ornithine decarboxylase 1 [Xenopus laevis] gi|27694591|gb|AAH44004.1| Odc1-prov protein [Xenopus laevis] Length = 460 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 60/378 (15%), Positives = 118/378 (31%), Gaps = 42/378 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + V A+KC + TL+ G +S E+ L Sbjct: 40 FYVADLGDIVK--KHVRWFKALPRVTPFYAVKCNDGKAIVKTLSILGAGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++C S++ K + K+ LRI Sbjct: 98 VQSIGVSPERIIYANPCKQVSQIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + ++ G+ FH + + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNVDIIGVSFHVGSGCTDPQTYVQAVSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAELGFNMHLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVKIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL--------------------------DISENIKNLVIVDSSVEAHV 269 V ++ TL ++ +++ + AHV Sbjct: 278 YYVASSFTLAVNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVNDGVYGSFNCILFDHAHV 337 Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 L + Y++ + G +C D E +++GD + FE++ Y + Sbjct: 338 KPVLTKKPKPD----EKFYSSSIWGPTCDGLDRIVERFELPELQVGDWMLFENMGAYTVA 393 Query: 330 RKNWFNGINMPTIAVKNV 347 + FNG PT+ Sbjct: 394 AASTFNGFQRPTLYYVMS 411 >gi|12007488|gb|AAG45222.1|AF323910_1 ornithine decarboxylase [Nicotiana glutinosa] Length = 432 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 112/362 (30%), Gaps = 26/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ +D ++ A+KC L+ +S E+ Sbjct: 65 PFYVLDLGEVVSLMDQWKSSL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 122 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K A + +++ ++ K + K ++ Sbjct: 123 YVLALGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSELLPRIK 182 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177 + + E ++ V+G+ FH N +A Sbjct: 183 PMFDGNARCPMGPKY-GALPEEVEPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAA 241 Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + E ++++ + +GGG V + F ++ + I EPG Sbjct: 242 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQHFDDEPELTIIAEPGR 301 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA---------TI 281 TL TTV+ + S+ + D+ + Sbjct: 302 FFAETAFTLATTVIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVLSNRTNVT 361 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + V G +C A D + +++ D + F ++ Y + FNG N T Sbjct: 362 CGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTST 421 Query: 342 IA 343 I Sbjct: 422 IV 423 >gi|327189543|gb|EGE56696.1| putative ornithine decarboxylase protein [Rhizobium etli CNPAF512] Length = 377 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ + A+K A + L +S+ E+ Sbjct: 18 PCLVVDLDVVRDNFHAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E ++ + A ++ ++ K A + Sbjct: 76 MALEAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + P + + + + G+ FH + + + L Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYGVSFHVGSQMTKVDAWDSAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + ++ F ++ +++GGG Q L+ Q Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRMHFGNQIPQTI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + V+ IS+ N + + + + Y Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTEHD 311 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD + E Y FNG Sbjct: 312 GDEM-EPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAVAFNGF 369 >gi|7230377|gb|AAF42973.1|AF127242_1 ornithine decarboxylase [Nicotiana tabacum] gi|13171237|gb|AAK13622.1|AF233849_1 ornithine decarboxylase [Nicotiana tabacum] gi|1754522|dbj|BAA14049.1| ornithine decarboxylase [Nicotiana tabacum] Length = 433 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 112/362 (30%), Gaps = 26/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ +D ++ A+KC L+ +S E+ Sbjct: 66 PFYVLDLGEVVSLMDQWKSAL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K A + +++ ++ K + K + ++ Sbjct: 124 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSELLLRIK 183 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177 + + + ++ V+G+ FH N +A Sbjct: 184 PMLDGNARCPMGPKY-GALPEEVDPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAA 242 Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + E ++++ + +GGG V + F ++ + I EPG Sbjct: 243 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQHFDDEPELTIIAEPGR 302 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA---------TI 281 TL TT++ + S+ + D+ + Sbjct: 303 FFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVLSNRSNVT 362 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + V G +C A D + +++ D + F ++ Y + FNG N Sbjct: 363 CGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTSA 422 Query: 342 IA 343 I Sbjct: 423 IV 424 >gi|205806|gb|AAA66286.1| ornithine decarboxylase [Rattus norvegicus] Length = 461 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 62/382 (16%), Positives = 118/382 (30%), Gaps = 33/382 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDVLK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + S++ K K+ LRI Sbjct: 98 VQGLGVPPERIIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDISE-------------------NIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ V S + D+ + Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQTGSDDEDESNEQTLMYYVNDGVYGSFNCILYDHAHVK 337 Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P+ Y++ + G +C D E + +GD + FE++ Y + + F Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCSLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNVDGTIKAIRE 356 NG P I + +++ Sbjct: 398 NGFQRPNIYYVMSRSMWQLMKQ 419 >gi|315040125|ref|XP_003169440.1| ornithine decarboxylase [Arthroderma gypseum CBS 118893] gi|311346130|gb|EFR05333.1| ornithine decarboxylase [Arthroderma gypseum CBS 118893] Length = 460 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 55/389 (14%), Positives = 112/389 (28%), Gaps = 42/389 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + +G +S E+ Sbjct: 73 PFYVADLGEIYRQHIRWKTNLPR--VKPFYAVKCNPNPQVLRLMAVLGNGFDCASKAEID 130 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L Y K S + +K K ++ LRI Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQIGVKQMTFDNTDELYKIKDMCPDAELYLRIL 190 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + NV G+ FH + F +++ Sbjct: 191 TDDSASLCRLSMKFGASLSSARPLLELAHTLGLNVVGVSFHVGSGAEDPKSFIKAVQDAR 250 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + + L + + +++ EPG V Sbjct: 251 FVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGEALDTYFPPH-IRVIAEPGRYYVAT 309 Query: 241 TTTLNTTVLDISE-------------------------NIKNLVIVDSSVEAHVPDYLLY 275 TL V+ + + ++ ++ V + + + Sbjct: 310 AFTLAANVIARRDVGAEEPLSDSESDSASPSRASTPTSSGAYMIYLNDGVYGNFSNIVFD 369 Query: 276 QESA-------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYN 327 + + P + G +C D+ + + +G+ + FE++ Y Sbjct: 370 HQHPVAQILTKDDDYTSAPIEYSIWGPTCDGIDVISKRITLNGLLGVGNWLYFENMGAYT 429 Query: 328 INRKNWFNGI--NMPTIAVKNVDGTIKAI 354 FNG I + G + Sbjct: 430 QCSATRFNGFTDKHEVIYIVTEPGAAALL 458 >gi|291412331|ref|XP_002722435.1| PREDICTED: ornithine decarboxylase 1-like [Oryctolagus cuniculus] Length = 461 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 65/374 (17%), Positives = 114/374 (30%), Gaps = 33/374 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDVLK--KHLRWLKALPRVTPFYAVKCNDSRAIIKTLATIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + S++ K ++ LRI Sbjct: 98 VQGLGVPPERIIYANPCKQVSQIKYAASSGVQMMTFDSEVELMKVARAHPKARLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F L + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFHMHLLDIGGGFPGSEDAKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---------------QESAT 280 V + TL ++ +K D EA ++ Y Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDEASERTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P Y A + G +C D + +GD + FE++ Y + + F Sbjct: 338 PLLQKRPKPDEQYYPASIWGPTCDGLDRIVARCDLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNVD 348 NG PTI Sbjct: 398 NGFQRPTIHYVMSG 411 >gi|134100867|ref|YP_001106528.1| ornithine decarboxylase [Saccharopolyspora erythraea NRRL 2338] gi|291003519|ref|ZP_06561492.1| ornithine decarboxylase [Saccharopolyspora erythraea NRRL 2338] gi|133913490|emb|CAM03603.1| ornithine decarboxylase [Saccharopolyspora erythraea NRRL 2338] Length = 407 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 110/364 (30%), Gaps = 24/364 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D + + + + A+K A + L +S E Sbjct: 32 PTPCLVVDLPTIAHRYRRLRGLFPR--AVVHYAVKANPAPEVVSLLAGLGASFDVASPAE 89 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + +Y K A + +F S+ + A+ + R Sbjct: 90 AELCLRAGAAPDRLSYGNTVKKASDVARVHGLGVRMFTVDSEPDLVNVSAEAPGADVLCR 149 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---M 178 + + L E + G+ FH + + Sbjct: 150 VFAEPPGASTPFGRKFGCEPELAESLLRRAGRLGLRPRGVSFHVGTQQLDPRAWEHGIAT 209 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYS----VQIYLE 232 + ++ + LGGG +D P ++ ++E+ ++Y ++ LE Sbjct: 210 AARLMDRLADSGVRLTTLDLGGGFPAAYRDGAPPPSEYAAAIEEYLDRYFGAARPEVVLE 269 Query: 233 PGEAIVTNTTTLNTTVLDIS---ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-- 287 PG A+V + L + V+ +S ++ + + + Sbjct: 270 PGRAVVADAGVLRSEVVLVSRKAYEHRHRWVYLDVGRHNGLTETEDEFITYALATPHDGG 329 Query: 288 --YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NMP 340 ++ G +C D+ E +H + GD + Y + FNG +P Sbjct: 330 PTGPVVLAGPTCDGDDVLYERNTYHLPLDLHAGDHVDVLAAGAYTASCATVGFNGFPPLP 389 Query: 341 TIAV 344 TI + Sbjct: 390 TIHL 393 >gi|78484619|ref|YP_390544.1| ornithine decarboxylase [Thiomicrospira crunogena XCL-2] gi|78362905|gb|ABB40870.1| ornithine decarboxylase [Thiomicrospira crunogena XCL-2] Length = 398 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 119/358 (33%), Gaps = 15/358 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ ++D Q++ GV+L A+K A + L + ++ E Sbjct: 35 ETPFLVLDLQEVEYQYSALQKAL--PGVELFYAIKSLAHPAVIRRLKKLGGSFDLATSGE 92 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V L G + K + F + K K ++ +R Sbjct: 93 VDLVKGLGIEGHQCIHTHPIKKDREIRHALDFGCTRFVVDNPDEVLKFIPYKDEVELMIR 152 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 ++ + L+ + V+GL FH ++ S ++ Sbjct: 153 VSFRSQDAIVDLSRKFGSALEELPGLVNLAMENGLTVSGLSFHVGSQSLSPFAQVNAVQA 212 Query: 182 IEKEFGHFIT-QIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS--VQIYLEPGEA 236 +W+ +GG + P++DFC + E + V+++ EPG Sbjct: 213 SISAMKEMSHVHWKWLDIGGSFPVSYQGPVMPIEDFCAPIMEALTELPASVKVFAEPGRF 272 Query: 237 IVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA--TIYPNTGPYT 289 I + V+ ++ ++ + D+ Y + + P Y Sbjct: 273 ISAPSMIEVIRVVGKAKRGARTWYYLDDGVYGALSGQMYDHAKYPIAPLKPVDPTGDFYP 332 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 +++ G +C + D+ E + +GD + + + Y I + FN P I V Sbjct: 333 SVLAGPTCDSVDVVDEDIELPELAVGDILIAKQMGAYTIASASEFNYYPKPKIVVVED 390 >gi|332020376|gb|EGI60797.1| Ornithine decarboxylase 2 [Acromyrmex echinatior] Length = 427 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 114/357 (31%), Gaps = 23/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D ++N + K V A+KC + L G +S E+ Sbjct: 35 FYIVDIGDIINKHREWIT--KIPRVTPHYAVKCNPDPNVIKILAALNAGFDCASEQEIRQ 92 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + + YK A N + I ++ +L K KD + I +R Sbjct: 93 VMQYGVQADRIIFANPYKCPSHIKYAKKMNIEQITADSELELLKIKDLYSEAKIVIRIRC 152 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----M 178 + S L P + + ++G FH +S Sbjct: 153 DAKNSECNLGLKFGCEPDED-AVRLIQLTANLGLTLHGFSFHVGSPCGELNAYSRGIGIC 211 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--VQIYLEPGEA 236 + I ++ I +GGG + + + + +++ EPG Sbjct: 212 KRLIAIAKSMGCQDVQLIDIGGGF-LGQSGTDIDKLANIINDAIQDLDSSIRVISEPGRY 270 Query: 237 IVTNTTT-----LNTTVLDISENIKNLVIVDSSV-----EAHVPDYLLYQESATIYPNTG 286 V + T + ++ + + + + + + Sbjct: 271 YVESAFTLASFLHSKKIVHKNGKFMRMYYANIGTYNSFLDELICPNTKVLRILFEPASDE 330 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + + + G +C + D+ + + IGD + +E+V Y++ FNG +P + Sbjct: 331 KFLSTLWGPTCDSFDVIAKDVLLPELHIGDWLVWENVGAYSLCLSTTFNGFPIPKVI 387 >gi|42526619|ref|NP_971717.1| pyridoxal-dependent family decarboxylase [Treponema denticola ATCC 35405] gi|41816812|gb|AAS11598.1| decarboxylase, pyridoxal-dependent family [Treponema denticola ATCC 35405] gi|325473161|gb|EGC76357.1| pyridoxal-dependent family Decarboxylase [Treponema denticola F0402] Length = 389 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 54/371 (14%), Positives = 118/371 (31%), Gaps = 29/371 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP +I+ + + N A + A+K + LN+ +S Y Sbjct: 22 LETPCVVINLKTIKKNYQKLRENFPYAD--IFYAIKANPHEEIISMLNEMGSCFDIASRY 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + E +Y K + A ++ L A + Sbjct: 80 ELDKVLKLGVSPERLSYGNTIKKAKDIAYFYEKGVRMFATDSKDDLKNIAQFAPGSRVYV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 + + + S + + C +S + G+ FH + + ++ Sbjct: 140 RILVENTTSADWPLSRKFGCHPDMAYDLCIQARDSGLI-PYGISFHVGSQQRDIGQWNDA 198 Query: 179 LKNIEKEFG----HFITQIEWISLGGGIHFTDKD------YPVKDFCQRLKEFSEKYSVQ 228 + + ++E +++GGG + + + L++ + + Sbjct: 199 IAKTKYLMDSLEEEEEIKLEMVNMGGGFPASYVTPANDLSEYASEISRYLEDDFGEERPR 258 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYP 283 I LEPG ++V ++ L T V+ IS + + + + I Sbjct: 259 IILEPGRSLVGDSGILVTEVVMISRKNNTALFRWVYLDTGLFNGLIETLNESLKYPIITD 318 Query: 284 ----NTGPYTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335 ++ G +C + DI ++ +K GDR+ F Y + + FN Sbjct: 319 KDEGCKKWGEVVLAGPTCDSMDIMYEDYKYSLPTNLKPGDRVYFLTTGAYTSSYASVEFN 378 Query: 336 GINMPTIAVKN 346 G + Sbjct: 379 GFPPIKTYIMK 389 >gi|332715985|ref|YP_004443451.1| ornithine decarboxylase [Agrobacterium sp. H13-3] gi|325062670|gb|ADY66360.1| ornithine decarboxylase [Agrobacterium sp. H13-3] Length = 377 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 48/367 (13%), Positives = 111/367 (30%), Gaps = 38/367 (10%) Query: 2 IKT-----PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 IKT P ++D + +N + + + A+K A + L Sbjct: 10 IKTRRPEGPCLVVDLDVVRDNFNAFRHSL--PNSAIYYAVKANPAPEILKLLASLGSNFD 67 Query: 57 SSSLYEVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 +S+ E+ + + ++ + A D ++ ++ K A Sbjct: 68 CASVAEIQMALDAGATSDRISFGNTIKKERDVARAYALGIDLFAVDSHEEVEKVARAAPG 127 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKS 171 + + + P + + + + G+ FH + + Sbjct: 128 ARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLESYGVSFHVGSQMMN 183 Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFS 222 + A L + ++ F ++ +++GGG + + L++ Sbjct: 184 LDAWDAALGDAKRVFASLSKQGIHLQMVNMGGGFPTKYLRGVPAAEEYGQAIDTALRKHF 243 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLL 274 + +EPG +V N + V+ +S N + + + + Sbjct: 244 GNQIPKTIIEPGRGMVGNAGVIKAEVVLVSRKSDNDNHRWVFLDIGKFGGLAETMDEAIR 303 Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRK 331 Y + ++ G +C + D+ E + + IGD + E Y Sbjct: 304 YPIRTERDQDEM-EPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGAGAYTTTYS 362 Query: 332 NW-FNGI 337 FNG Sbjct: 363 AVAFNGF 369 >gi|296818705|ref|XP_002849689.1| ornithine decarboxylase [Arthroderma otae CBS 113480] gi|238840142|gb|EEQ29804.1| ornithine decarboxylase [Arthroderma otae CBS 113480] Length = 457 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 105/370 (28%), Gaps = 40/370 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + +G +S E+ Sbjct: 70 PFYVADLGEIYRQHIRWKTNLPR--VKPFYAVKCNPNPMVLRLMAVLGNGFDCASKAEID 127 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L Y K S + +K K+ ++ LRI Sbjct: 128 LALAAGVDPTRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKSMCPDAELYLRIL 187 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + NV G+ FH + F +++ Sbjct: 188 TDDSASLCRLSMKFGASLSSARPLLELAHELGLNVVGVSFHVGSGAEDPKSFIKAVQDAR 247 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + + L + + +++ EPG V Sbjct: 248 FVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGEALDTYFPPH-IRVIAEPGRYYVAT 306 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATI-------------- 281 TL V+ + + DS ++ P + Sbjct: 307 AFTLAANVIARRDVGSEEQLSDSESDSTSPTRAATPASNGMYMIYLNDGVYGNFSNIVFD 366 Query: 282 -------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYN 327 + P + G +C D+ E + +G+ + FE++ Y Sbjct: 367 HQHPVAQILTKDDAYTSAPIQYSIWGPTCDGIDVISESVTLNGLLGVGNWLYFENMGAYT 426 Query: 328 INRKNWFNGI 337 FNG Sbjct: 427 QCSATRFNGF 436 >gi|116253893|ref|YP_769731.1| lysine/ornithine decarboxylase [Rhizobium leguminosarum bv. viciae 3841] gi|115258541|emb|CAK09645.1| putative lysine/ornithine decarboxylase [Rhizobium leguminosarum bv. viciae 3841] Length = 377 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 107/359 (29%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N D + ++ + A+K A + L +S+ E+ Sbjct: 18 PCLVVDLDVVRDNFDAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E +Y + A ++ ++ K A + Sbjct: 76 MALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + P + + + + G+ FH + + + L Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYGVSFHVGSQMTKVDAWDSAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + ++ F ++ +++GGG Q L+ Q Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFGNQIPQTI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + V+ IS+ N + + + + Y Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTEHD 311 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD + E Y FNG Sbjct: 312 GDEM-EPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAVAFNGF 369 >gi|15966628|ref|NP_386981.1| putative ornithine, DAP, or arginine decarboxylase protein [Sinorhizobium meliloti 1021] gi|307300337|ref|ZP_07580117.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti BL225C] gi|307319620|ref|ZP_07599046.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83] gi|15075900|emb|CAC47454.1| Putative ornithine, DAP, or arginine decarboxylase [Sinorhizobium meliloti 1021] gi|306894742|gb|EFN25502.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83] gi|306904503|gb|EFN35087.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti BL225C] Length = 379 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ + A+K A + L +S+ E+ Sbjct: 20 PCLVVDLDVVRDNFKAFRHALPDSA--IYYAVKANPAPEILRLLAGLGSNFDCASVAEIE 77 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + +Y + A ++ ++ K A + Sbjct: 78 MALDAGATPNRISYGNTIKKERDVARAHALGISLFAVDSHEEVEKIARAAPGARVFCRVL 137 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + P + + + + G+ FH + + A L Sbjct: 138 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLVSYGVSFHVGSQMTKLDAWDAAL 193 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + ++ F +++ +++GGG LK+ + Sbjct: 194 ADAKRVFVQLAKQGIELKMVNMGGGFPTKYLRDVPSAEAYGQAIFGALKKHFGNNIPETI 253 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + V+ +S+ N + + + + Y T Sbjct: 254 IEPGRGMVGNAGVIKAEVVLVSKKSDNDSHRWVFLDIGKFGGLAETMDEAIRYPIR-TAR 312 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337 ++ G +C + D+ E + + IGD + E Y FNG Sbjct: 313 DADAMEPCVLAGPTCDSADVLYEKNMYPLPISLTIGDEVLIEGTGAYTTTYSAVAFNGF 371 >gi|308205619|gb|ADO19084.1| diaminopimelate decarboxylase [Nostoc flagelliforme str. Sunitezuoqi] Length = 458 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 49/404 (12%), Positives = 121/404 (29%), Gaps = 43/404 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ + +L ++ + A + + G +++ + Sbjct: 45 GSPLYVYNGDRLGETIERITKAVSYPRTQFRFASVTNGNIALLKIFRSFGWGLHANTPGD 104 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIG 119 + LG F Y+ + + + N T+ F++++QL + ++ Sbjct: 105 IYLGLQAGFDASEIVYSGSNLNRSEMLEVLNWGVTTLNFDSLAQLQ-LCCEVLPKGREKN 163 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +R+ ++ + ++GL F+ + F+ ++ Sbjct: 164 IRLGLRLNLPEITGDSRIGVRPEEFGDAIALTGEVGIKLSGLHFYRGTGTNATAAFTQVI 223 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEK--YSVQIYLEP 233 + + E++ GGG + + + F L + + + + +EP Sbjct: 224 DTVIAT-AQQLPDWEYLDFGGGFGYPYHHNKTAFDWEIFGAELTKRITRLGRKIDLVIEP 282 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGP----- 287 G A + TL V+ + + ++ + A++ + I Sbjct: 283 GRAAIAGCATLLAQVVSVKWQGEKQIVGVDTTVANLSVPSVHGGYREIITWKQANKSSIP 342 Query: 288 --------------------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 + +CG + + D G+ ++IGD ++ Sbjct: 343 HSPLLRLTSAKLGTSRSVQVPTPDSLFKTDICGNTTYSRDYLGKNCQLPALEIGDIVAIL 402 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 DV Y + F P + R Y+ N Sbjct: 403 DVGAYGYAMSSHFLHRPKPAEVLLENCTHRLIRRREDYSVLLTN 446 >gi|114576085|ref|XP_001156939.1| PREDICTED: ornithine decarboxylase 1 isoform 3 [Pan troglodytes] Length = 476 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 65/407 (15%), Positives = 122/407 (29%), Gaps = 56/407 (13%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E Y K +N + F++ +L K K I Sbjct: 98 VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKIYQRQYI 157 Query: 123 NPSVSYS-------KFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCEN 169 + R + G + ++ + +V G+ FH Sbjct: 158 CCTFLACRLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGC 217 Query: 170 KSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKE 220 F + + F + + +GGG ++ + K Sbjct: 218 TDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKY 277 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVL-------------------------DISENI 255 F V+I EPG V + TL ++ +++ + Sbjct: 278 FPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGV 337 Query: 256 KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIG 315 AHV L + Y++ + G +C D E + +G Sbjct: 338 YGSFNCILYDHAHVKPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVG 393 Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 D + FE++ Y + + FNG PTI + +++F D+ Sbjct: 394 DWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 440 >gi|296270931|ref|YP_003653563.1| Orn/DAP/Arg decarboxylase 2 [Thermobispora bispora DSM 43833] gi|296093718|gb|ADG89670.1| Orn/DAP/Arg decarboxylase 2 [Thermobispora bispora DSM 43833] Length = 362 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 102/349 (29%), Gaps = 19/349 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D L + G ++ A+K + L Y+DG +S E Sbjct: 16 PAYVYDLDGLRRHAAAVRDAM--TGTQIHYAVKANPDPKVLRALAPYVDGFEVASAGEFQ 73 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E G ++ K + A+ + ++L + A L + Sbjct: 74 RVTEVVPGMPVSFGGPGKTTDELALAPLVHRWHVESPAELRRLTGPADILLRVNLGVPVE 133 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + A P +C + + + G+ H + +E Sbjct: 134 GAALTMGGGATPFGMDPEGVAECLRLLPTSRARLRGVHAHLASGLDAPALLEIARAVLEY 193 Query: 185 EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 + +LGGG+ + + + L+ + EPG A+ Sbjct: 194 G---RGLGVAEFNLGGGMAVDYRRPGNRFDWAAYGEGLRRLAAPGETLRI-EPGRALTAY 249 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG------PYTAMVC 293 TTV+D+ V S H+ + + G P + Sbjct: 250 CGWYLTTVIDVKRVHGERFAVLSGGTHHLRTPVTKGHDQPFTVIHRGAGGRPEPEPVTLV 309 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPT 341 GR C D+F + GD ++F Y N + F P Sbjct: 310 GRLCTPKDVFARRV-PASLAPGDVVAFAMAGAYAWNISHHDFLMHPKPE 357 >gi|26541511|gb|AAN85498.1|AF484556_20 diaminopimelase decarboxylase [Streptomyces atroolivaceus] Length = 433 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 123/400 (30%), Gaps = 39/400 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D+ + + T + G+ + +LK + ++ +SS++E Sbjct: 29 GTPVFVYDEATVRASSKTMSTLPNAFGLTVRYSLKACPGQAIIRLFDREGFSFDASSVWE 88 Query: 63 VMLG-HEKFGGETHAYN--VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + A D + ++ ++ QL ++ + Sbjct: 89 ARRAVLAGVEPGRISMTAQEAVFDENLRDLIDQGLQFDAGSLHQLEEYGRAY--PGGAVA 146 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENKSFLCF 175 +RINP + P S G + E + + + ++ + Sbjct: 147 IRINPGFGSGLVGRLNSGGPQSSFGIWHEQLPEVKQIVEQYGLRLVRLQSHIGSGHHWDI 206 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIH----FTDKDYPVKDFCQRLKEFSEKYSV---- 227 F + + LGGG +D Y ++ + + + ++++ Sbjct: 207 LVDAVRTMLSFARDFQDVHTLDLGGGYRVSALQSDPVYDHTEWARVVADELKQFAEETGR 266 Query: 228 --QIYLEPGEAIVTNTTTLNTTVL---DISENIKNLVIVDSSVEAHVPDYLLYQESATI- 281 +EPG + +L T V+ D + + ++S + + + Sbjct: 267 RLHTEVEPGTYLTALAGSLVTKVIDKADTGAEGNSFLKINSGLTEIARPSYYGVQHPIVS 326 Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-GEFHFEKPV-----KIGDRISFEDVAGYN 327 V G C+AGD+ + PV +IGD + E Y Sbjct: 327 VPATGGAERAADDREEFNVVGHCCIAGDVLTAKQEELAPVPLGRTEIGDYVVIERAGSYC 386 Query: 328 INRKN-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365 + FN ++ DG+ IR S N Sbjct: 387 SSMSMKNFNSYPEAAEVLRRTDGSFDLIRSRQSIEQVIVN 426 >gi|319899290|ref|YP_004159385.1| lysine/ornithine decarboxylase [Bartonella clarridgeiae 73] gi|319403256|emb|CBI76815.1| lysine/ornithine decarboxylase [Bartonella clarridgeiae 73] Length = 453 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 111/359 (30%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ A+K A + L ++S+ E+ Sbjct: 94 PCLVVDLDVVHENYLNFKKALPQS--RIFYAIKANPAPEILRLLVSLGSSFDAASIAEIE 151 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ + A + + ++ K A + Sbjct: 152 MALKAGATADRISFGNTIKKERDIARAHALGVSLYAVDCLEEVEKVACAAPGARVFCRVL 211 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + PF + + + G+ FH + + L Sbjct: 212 TDGEGAEWPLSQKFGCVPFMAVDV----LRHAHQLGLQAYGVSFHVGSQQTDLNAWDRAL 267 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIY 230 + F Q++ +++GGG LK++ + Sbjct: 268 SDTAFVFKSLEQEGIQLKLVNMGGGFPTRYLKDIPTVQTYGMAIFDSLKKYFGNRIPETI 327 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG A+V N + T V+ IS+ K+ I + + + + + Y T Y Sbjct: 328 IEPGRAMVGNAGVIRTEVVLISKKAKDDNIRWVYLDVGKFNGLTETMDEAIRYP-IETAY 386 Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD + Y + FNG Sbjct: 387 DDKAMEPCILAGPTCDSADVMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASVAFNGF 445 >gi|134097855|ref|YP_001103516.1| Orn/DAP/Arg decarboxylase 2 [Saccharopolyspora erythraea NRRL 2338] gi|291005509|ref|ZP_06563482.1| Orn/DAP/Arg decarboxylase 2 [Saccharopolyspora erythraea NRRL 2338] gi|133910478|emb|CAM00591.1| Orn/DAP/Arg decarboxylase 2 [Saccharopolyspora erythraea NRRL 2338] Length = 402 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 53/369 (14%), Positives = 123/369 (33%), Gaps = 26/369 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP ++D + N ++ A+K A + TL +S E Sbjct: 36 ETPCLVVDLAAVRRNYQALRSAL--PDARICYAVKANPAPEVVATLAALGSSFDVASPGE 93 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + L E+ +Y K A +F T S+ + ++ R Sbjct: 94 IDLCLAQGASPESISYGNTIKKPRDIARAHRLGVRLFVTDSEADLLNIAESAPGSQVFCR 153 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + S+ + + + + G+ FH + + ++ Sbjct: 154 VLVDNKGSRTPFGRKFGCTPQTAVRLLRRAAELGLDPYGVSFHIGSQQLDPSAWEHGIRA 213 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQIYLE 232 + F ++LGGG+ + P+ D+ + ++ +++ ++ +E Sbjct: 214 AREVFDGLAEHGVTPRMVNLGGGLPASYTESAPPLGDYAEHIERALDRHFGARRPELLIE 273 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV-------DSSVEAHVPDYLLYQESATIYPNT 285 PG +V + L T V+ ++ + + + + + + Y+ + + Sbjct: 274 PGRQVVGDAGVLRTEVVLVTASAGDDRRWVYLDVGRYNGLAETEGEAITYRLRTSRDGDE 333 Query: 286 GPYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI-NMP 340 ++ G +C D+ + ++ GDR+ Y + + FNGI +P Sbjct: 334 CG-PVVLAGPTCDGDDVLYQHTRYDLPLTLRGGDRVDLLSAGAYTASYSSVCFNGIAPLP 392 Query: 341 TIAVKNVDG 349 T + D Sbjct: 393 TH-CIDGDE 400 >gi|296446216|ref|ZP_06888163.1| Orn/DAP/Arg decarboxylase 2 [Methylosinus trichosporium OB3b] gi|296256253|gb|EFH03333.1| Orn/DAP/Arg decarboxylase 2 [Methylosinus trichosporium OB3b] Length = 380 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 46/359 (12%), Positives = 105/359 (29%), Gaps = 31/359 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ A+K A + L + ++S+ E+ Sbjct: 21 PCLVVDLDIVRDNYQSFARAL--PDTRVFYAVKANPAPEVLALLARLGSCFDTASVVEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ + A + +++ K A + Sbjct: 79 QTLAAGATPDRISFGNTIKKERDIARAYALGVRLFAVDCEAEVEKIARAAPGARVFCRIL 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + P + + + G+ FH + + + L Sbjct: 139 CDGDGAEWPLSRKFGCAPQMA----PRVLEHAHRLGLTAYGVSFHVGSQQRDPGMWDGAL 194 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 K+ + F Q++ ++LGGG + L + + Sbjct: 195 KSAAEIFNDLAERGIQLQMVNLGGGFPTKYLKNVPVVKAYGQAIFRALSKHFGNRIPETI 254 Query: 231 LEPGEAIVTNTTTLNTTVLDI-----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 +EPG +V N + V+ + + ++ + + Sbjct: 255 IEPGRGMVGNAGVIEAEVVLVSRKSDDDPVRWVYLDIGKFNGLAETTDEMIRYPIRTEAD 314 Query: 286 GPYTAMVC--GRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G TA G SC + D+ E + ++IG ++ E Y + FNG Sbjct: 315 GDATAPCVLAGPSCDSIDVLYEKDPYLLPIGLEIGSKVLIEGTGAYTTTYSSVGFNGFP 373 >gi|241206375|ref|YP_002977471.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860265|gb|ACS57932.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 377 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ + A+K A + L +S+ E+ Sbjct: 18 PCLVVDLDVVRDNFHAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E +Y + A ++ ++ K A + Sbjct: 76 MALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + P + + + + G+ FH + + + L Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYGVSFHVGSQMTKVDAWDSAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + ++ F ++ +++GGG Q L+ Q Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFGNQIPQTI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + V+ IS+ N + + + + Y Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTEHD 311 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD + E Y FNG Sbjct: 312 GDEM-EPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAVAFNGF 369 >gi|121706982|ref|XP_001271694.1| ornithine decarboxylase [Aspergillus clavatus NRRL 1] gi|119399842|gb|EAW10268.1| ornithine decarboxylase [Aspergillus clavatus NRRL 1] Length = 441 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 112/360 (31%), Gaps = 31/360 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + VK A+KC + + + +G +S E+ L Sbjct: 64 FYVADMGEIYR--QHLRWKMNLSRVKPFYAVKCNPDPEILRLMAKLGNGFDCASKSEIDL 121 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K + + +K KA ++ LRI Sbjct: 122 ALETGIDPSRIIYAQPCKTKSYLRYAAQVGVRQMTFDNADELYKIKACFPDAELYLRILT 181 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + + + V G+ FH + F +++ Sbjct: 182 DDSTSLCRLSMKFGASLDIARQLLELAAELELKVVGVSFHVGSGAEDPRAFLKAVQDARL 241 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F ++ + +GGG + + L + + ++I EPG V + Sbjct: 242 VFDQAAEVGHELHTLDVGGGFSQDTFETFAGILGEALDTYFPPH-IRIIAEPGRYYVASA 300 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288 TL V+ + + + ++ D + S I+ + P Sbjct: 301 LTLAANVIARRDLRDPEDPANDAYMLYLNDGVYGNFSNIIFDHQHPVAKILTRSGGPQPI 360 Query: 289 ----------TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C D+ + + +GD + FE++ Y FNG Sbjct: 361 APNAATSEGIAYSIWGPTCDGIDVITQRIVLPGLLDVGDWLYFEEMGAYTKCSATRFNGF 420 >gi|33340513|gb|AAQ14852.1|AF321138_1 ornithine decarboxylase [Nicotiana tabacum] Length = 433 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 112/362 (30%), Gaps = 26/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ +D ++ A+KC L+ +S E+ Sbjct: 66 PFYVLDLGEVVSLMDQWKSAL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K A + +++ ++ K + K + ++ Sbjct: 124 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSELSVRIK 183 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177 + + + ++ V+G+ FH N +A Sbjct: 184 PMLDGNARSAMGPKY-GALPEEVDPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAA 242 Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + E ++++ + +GGG V + F ++ + I EPG Sbjct: 243 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQHFDDEPELTIIAEPGR 302 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA---------TI 281 TL TT++ + S+ + D+ + Sbjct: 303 FFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVLSNRSNVT 362 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + V G +C A D + +++ D + F ++ Y + FNG N Sbjct: 363 CGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTSA 422 Query: 342 IA 343 I Sbjct: 423 IV 424 >gi|194757515|ref|XP_001961010.1| GF13654 [Drosophila ananassae] gi|190622308|gb|EDV37832.1| GF13654 [Drosophila ananassae] Length = 396 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 102/358 (28%), Gaps = 25/358 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + + + A+KC + L + G +S E+ L Sbjct: 33 LNICDLSSVERKYQLWKKLLPR--IMPCYAVKCNDDPVLVKLLAELGAGFDCASKNELKL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + ++ +K + +R Sbjct: 91 VLGFDVSPERIIFANPCRPVSHLDYAKENRVANGTVDNEFEVYKLHKHYPESNLIVRFKS 150 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + + +S V G FH + +K + Sbjct: 151 EAKEAQCPLGDKFGCDADADATALMLLAKSLDLTVTGTSFHVGSGCSELEAYDRAIKKAK 210 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236 F ++++ +GGG +D + + EK+ QI EPG Sbjct: 211 NIFKFGELLGYDMDFLDIGGGFPGSDD-EKFQKIADIVNTSVEKHFPDERVQIIAEPGRY 269 Query: 237 IVTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 V TL + E V S + D+ + + Sbjct: 270 FVAAAFTLICKIHARREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVTAQHYLDDAE 329 Query: 286 G--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + +++ G SC A D E + GD + F ++ Y + + FNG +P Sbjct: 330 NLPKFKSLIWGPSCDALDKISEDLRLPNLNRGDLLGFPNMGAYTMPIASPFNGFEIPK 387 >gi|190893472|ref|YP_001980014.1| ornithine decarboxylase [Rhizobium etli CIAT 652] gi|190698751|gb|ACE92836.1| probable ornithine decarboxylase protein [Rhizobium etli CIAT 652] Length = 377 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ + A+K A + L +S+ E+ Sbjct: 18 PCLVVDLDVVRDNFHAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E ++ + A ++ ++ K A + Sbjct: 76 MALEAGATAARISFGNTIKKERDIARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + P + + + + G+ FH + + + L Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYGVSFHVGSQMTKVDAWDSAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + ++ F ++ +++GGG Q L+ Q Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFGNQIPQTI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + V+ IS+ N + + + + Y Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTEHD 311 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD + E Y FNG Sbjct: 312 GDEM-EPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAVAFNGF 369 >gi|218961453|ref|YP_001741228.1| Ornithine decarboxylase [Candidatus Cloacamonas acidaminovorans] gi|167730110|emb|CAO81022.1| Ornithine decarboxylase [Candidatus Cloacamonas acidaminovorans] Length = 393 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 112/359 (31%), Gaps = 26/359 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP ++D + N K+ A+K + LN+ +S Y Sbjct: 29 IPTPCLIVDLDIVRNKYLELQASM--PNYKIYYAVKANPMLEVIMLLNELGANFDLASPY 86 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ K ++ L A Sbjct: 87 ELDQMLNLGIEPSRLSFGNTIKKVNDIKYFYEKGVRLFATDSKLDLANLAKYAPGSKVLF 146 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 + + + + P + K + G+ FH + + + Sbjct: 147 RILTEGTGADWPLSRKFGSHPDTIYHLIVKAAKMNLQPW--GISFHVGSQQRDIGQWDDA 204 Query: 179 LKNIEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEF----SEKYSVQI 229 + + F +++ I++GGG + ++++ ++ F +I Sbjct: 205 VARCKYLFDAVAEEGIELKMINIGGGFPANYVDPTFSIQEYATEIQRFITEDFGDNLPEI 264 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYLLYQESATIYPN 284 LEPG ++V + + + V++++ KN + ++ + + +P Sbjct: 265 ILEPGRSLVADAGVIVSEVINVARKSKNNLYQWVYLDIGKFGGLIETIDESIKFPIYFPR 324 Query: 285 TG-PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI E + + GDR+ Y + + FNG Sbjct: 325 KGLAEEIILAGPTCDSMDILYEHYRYRMPEGTVPGDRVYIFTTGAYTQSYSSVNFNGFP 383 >gi|311899938|dbj|BAJ32346.1| putative diaminopimelate decarboxylase [Kitasatospora setae KM-6054] Length = 420 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 54/388 (13%), Positives = 109/388 (28%), Gaps = 35/388 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D + + V++ +LK + L++ SS+ E Sbjct: 14 GTPLYLYDGDAVRDQYLGLRDRLH-PVVEIFYSLKANPNISVCALLHRLGARAEVSSMAE 72 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 ++ E + + K + D II ++ +L A L + Sbjct: 73 LVTALEAGVPADQIMFLGPGKSEQEITACLKEDIRAIICESIDELAAIDRLAADLGTRAR 132 Query: 120 LRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK- 170 + + + S K + G + ++E ++ G+ + Sbjct: 133 VVLRVNPSFTVKGSGLTMGGKPRQFGIDEQALFDAEDLPGRHARTDLIGVQAYMGTRILS 192 Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 +L E+ ++ + +GGG+ +D V + E Sbjct: 193 EEAVAENTRRILDMAERLAERQGFPLDLVDVGGGLGVAYFAQEQDLDVDRLADLVNPIFE 252 Query: 224 KYSV-----QIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLY-- 275 ++ ++ +E G +V + V + E++ + I D H+ + Sbjct: 253 EFHRRRPDTRVVMELGRYLVATGGVYVSAVRYVKESMGERFAITDGGTNHHMAAVGIGSF 312 Query: 276 -----QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329 V G C D G+ ++ GD I E Y Sbjct: 313 AKRNFPMRLLNRAGGPAAKWNVTGPLCTPNDTLGKGVELADDLRPGDLIGVERSGAYGPT 372 Query: 330 RKN-WFNGINMPTIAVKNVDGTIKAIRE 356 F P + R Sbjct: 373 ASPVLFLSHGYPAEVLVVDGDAQLVRRR 400 >gi|194863624|ref|XP_001970532.1| GG23323 [Drosophila erecta] gi|190662399|gb|EDV59591.1| GG23323 [Drosophila erecta] Length = 396 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 104/357 (29%), Gaps = 23/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + L + +K A+KC + L + G +S EV L Sbjct: 35 LNICDLSSVERKLRLWQRLLPR--IKPFYAVKCNDDPVVVRLLAELGAGFDCASKNEVKL 92 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + ++ +K + + +R Sbjct: 93 VLGFDVPPERIIFANPCRPVSHLEYAKEHQVANGTVDNEFEVYKLHTHYPNSNLIVRFKS 152 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + + + +S V G FH + +K + Sbjct: 153 EAKEAQCPLGDKFGCDADVDAAALMLLAKSLDLKVTGTSFHVGSGCSELEAYDRAIKKAK 212 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237 F ++++ +GGG +D K ++ V+I EPG Sbjct: 213 NLFKFGALLGYDMDFLDIGGGFPGSDDGKFEKIAESVNTSVQRHFPNERVRIIAEPGRFF 272 Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT- 285 V TL + E V S + D+ + + Sbjct: 273 VAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVTAEHYLDNADS 332 Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 +++ G SC A D E + GD + F ++ Y + + FNG +P Sbjct: 333 LPQLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASPFNGFELPK 389 >gi|182678066|ref|YP_001832212.1| Orn/DAP/Arg decarboxylase 2 [Beijerinckia indica subsp. indica ATCC 9039] gi|182633949|gb|ACB94723.1| Orn/DAP/Arg decarboxylase 2 [Beijerinckia indica subsp. indica ATCC 9039] Length = 376 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 107/357 (29%), Gaps = 27/357 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + + +N ++ A+K + + L + ++S+ E+ Sbjct: 17 PCLVLDLEVVRDNYQAFSKAL--PDTRVFYAVKANPDPQVLELLARLGSCFDTASVVEIQ 74 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ + A + +++ K A + Sbjct: 75 QVLAAGASADRISFGNTIKKERDIARAYALGVRLFAVDCEAEVEKIARAAPGSRVFCRIL 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + P L + + GL FH + ++ L + + L++ Sbjct: 135 CDGEGAEWPLSRKFGCAPS--LAPRVLEHAHRLGLQAFGLSFHVGSQQRNPLMWDSALRS 192 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 + F ++ ++LGGG L++ + +E Sbjct: 193 SSEIFKDLAERGITLQMVNLGGGFPTKYLRDVPAVKAYGEAIFHSLRKHFGNKIPETIIE 252 Query: 233 PGEAIVTNTTTLNTTVLDISENI-----KNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 PG +V N + V+ IS+ K + + G Sbjct: 253 PGRGMVGNAGVIEAEVVLISKKSEDDSVKWVYLDIGKFNGLAETMDEMIRYPIRTAFDGD 312 Query: 288 --YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 ++ G +C + D+ E + ++IG ++ E Y + FNG Sbjct: 313 ACEPCVLAGPTCDSVDVLYEKDPYLLPISLEIGSKVLIEGTGAYTTMYSSVGFNGFP 369 >gi|159031805|dbj|BAF91874.1| ornithine decarboxylase [Nicotiana benthamiana] Length = 433 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 112/362 (30%), Gaps = 26/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ +D ++ A+KC L+ +S E+ Sbjct: 66 PFYVLDLGEVVSLMDQWKSAL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K A + +++ ++ K + K + ++ Sbjct: 124 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSELLLRIK 183 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177 + + + ++ V+G+ FH N +A Sbjct: 184 PMLDGNARCPMGPKY-GALPEEVDPLLRAAQTARLTVSGVSFHIGSGDADSNAYLGAIAA 242 Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + E ++++ + +GGG V + F ++ + I EPG Sbjct: 243 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQHFDDEPGLAIIAEPGR 302 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA---------TI 281 TL TT++ + S+ + D+ + Sbjct: 303 FFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVLSNRSNVT 362 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + V G +C A D + +++ D + F ++ Y + FNG N Sbjct: 363 CGRSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTSA 422 Query: 342 IA 343 I Sbjct: 423 IV 424 >gi|332020341|gb|EGI60763.1| Ornithine decarboxylase [Acromyrmex echinatior] Length = 471 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 113/373 (30%), Gaps = 27/373 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D ++ K V+ A+KC + + L +S E+ Sbjct: 36 FYVLDIGDIVQKHKIWKE--KLPRVEPYYAVKCNDNLIVIEVLAALGINFDCASKNEINK 93 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + K +T+ + S+L+K K + +R Sbjct: 94 VLSFGVESSRIIFANPAKPASHIRHAAAVGVETMTVDNESELHKIKKLFPTAKIVLRIRC 153 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + ++ + P + NV G FH + F + + Sbjct: 154 DAEMAQCPLGMKFGCDPIHEAPNLL-HLAYNLGLNVIGFSFHVGSGCQDPPVFYRAIHHC 212 Query: 183 EKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGE 235 + F + + LGGG K + + + + ++Y + EPG Sbjct: 213 KILFDMATDLGFKPYLLDLGGGYPGN-KGTSIDKIAEIINKALDEYFNTDAVHVIAEPGR 271 Query: 236 AIVTNTTTLNTTVLD-------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 V + TL T++ V S + D+ Sbjct: 272 FYVASAFTLATSIHSKRSIRGDENSSAITHNMYYINDGVYGSFNCLLYDHQHVTPIPLKN 331 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + V G +C D E +++G+ + FE++ Y + + FNG +P + Sbjct: 332 GCGKMIPSSVWGPTCDGLDKIVENIMLNDMELGEWMIFENMGAYTLPVASPFNGFPIPKV 391 Query: 343 AVKNVDGTIKAIR 355 + + ++ Sbjct: 392 HIVADEDIWLLLK 404 >gi|258578139|ref|XP_002543251.1| ornithine decarboxylase [Uncinocarpus reesii 1704] gi|237903517|gb|EEP77918.1| ornithine decarboxylase [Uncinocarpus reesii 1704] Length = 446 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 111/359 (30%), Gaps = 29/359 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ + VK A+KC + + +G +S E+ Sbjct: 70 PFYVADLGEIYR--QHVRWKMNLGRVKPFYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 127 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 Y K + + +K KA ++ LRI Sbjct: 128 YALDAGVDPSRIIYAHPCKTKSYLRYAAQQGVKQMTFDNADELYKIKAMCPDAELFLRIL 187 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + + NV G+ FH + F +++ Sbjct: 188 TDDSASLCRLSMKFGASLTVTRSLLELAKELDLNVVGVSFHVGSGAEDPKAFVKAVEDAR 247 Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG ++ L + + +++ EPG V + Sbjct: 248 FVFDQASDIGHDLKVLDVGGGFCDETFEHFAAALSDALDTYFPPH-IRVIAEPGRYYVAS 306 Query: 241 TTTLNTTVLDISEN--------------IKNLVIVDSSVEAHVPDYLLYQESA------- 279 TL V+ + ++ ++ V + + + + Sbjct: 307 AFTLAANVIARRDVSPSASDSDSSTGPAEMYMIYLNDGVYGNFSNIVFDHQHPVAQILTK 366 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 +T P + G +C D+ E + +G+ + FE++ Y FNG Sbjct: 367 DDITSTHPVEYSIWGPTCDGIDVISERITLNGVLGVGNWLYFENMGAYTRCSATRFNGF 425 >gi|17562780|ref|NP_504752.1| Ornithine DeCarboxylase family member (odc-1) [Caenorhabditis elegans] gi|12644263|sp|P41931|DCOR_CAEEL RecName: Full=Ornithine decarboxylase; Short=ODC gi|1658364|gb|AAB18317.1| Ornithine decarboxylase protein 1, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 422 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 51/380 (13%), Positives = 117/380 (30%), Gaps = 34/380 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + L+D K++ + ++ A+KC + L G +S E+ + Sbjct: 42 FMLVDLDKIIERFQLWKR--ELPMIEPFYAVKCNTDLVLIRILASLGCGFDCASKDEIDI 99 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K A + D + + K + ++ LRI Sbjct: 100 VMGTGVSAERIIYANPCKTRSFIAHAMDRDVKMMTFDNPEELLKIAKLHPNAEMILRIAV 159 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 S + L ++ E NV G+ FH + L++ Sbjct: 160 SDPTATCPLNLKFGADPI--IAAPQLLKTASEEGINVVGISFHVGSGCNDASAYRNALQH 217 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI--------- 229 + +++ I +GGG + P + + +++ +++ Sbjct: 218 AKNLCEIGEGLGFKMDIIDMGGGFPGAEHHNPFEKIAETIRDALDEFFPDTNKRLIAEPG 277 Query: 230 -YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP- 287 + G + T V D ++ D + + ++ + P Sbjct: 278 RFFAAGPFSLVANIIHATEVPASKITKDPKDCADHGYMYYINDGVYGSFNCILFDHAHPI 337 Query: 288 ------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + + G +C + D+ + + +G+ + + D+ Y + FN Sbjct: 338 GSPLFDTDRNEKFMSTIWGPTCDSLDLVEDKKLMPKMNVGEWLYYPDMGAYTLAAATTFN 397 Query: 336 GINMPTIAVKNVDGTIKAIR 355 G + P + ++IR Sbjct: 398 GFSKPVPMYVMSEEMWESIR 417 >gi|70994492|ref|XP_752025.1| ornithine decarboxylase [Aspergillus fumigatus Af293] gi|66849659|gb|EAL89987.1| ornithine decarboxylase [Aspergillus fumigatus Af293] gi|159125062|gb|EDP50179.1| ornithine decarboxylase [Aspergillus fumigatus A1163] Length = 453 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 111/360 (30%), Gaps = 31/360 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + VK A+KC + + + +G +S E+ L Sbjct: 76 FYVADMGEIYR--QHLRWKMNLGRVKPFYAVKCNPDPEILRLMAKLGNGFDCASKAEIDL 133 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K + + +K KA ++ LRI Sbjct: 134 ALETGIDPSRIIYAQPCKTKSYLRYAAKVGVKQMTFDNADELYKIKACYPDAELYLRILT 193 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + + + V G+ FH + F +++ Sbjct: 194 DDSTSLCRLSMKFGASLDIARQLLELAHELELKVVGVSFHVGSGAEDPRAFLKAVQDARL 253 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F ++ + +GGG + + L + + +++ EPG V + Sbjct: 254 VFDQAAEVGHELHTLDVGGGFCQDTFEKFAGILSEALDTYFPPH-IRVIAEPGRYYVASA 312 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288 TL V+ + + + ++ D + S I+ + P Sbjct: 313 FTLAANVIARRDVRDPKDPANDTYMLYLNDGVYGNFSNIIFDHQHPVAKILTCSGETQPS 372 Query: 289 ----------TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C D+ + + +GD + FE++ Y FNG Sbjct: 373 ALNAATSEGIAYSIWGPTCDGIDVITQRIVLPGLLDVGDWLYFEEMGAYTKCSATRFNGF 432 >gi|300785911|ref|YP_003766202.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] gi|299795425|gb|ADJ45800.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] Length = 431 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 48/397 (12%), Positives = 110/397 (27%), Gaps = 35/397 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D +L L +++ +LK + L+ + SS+ E Sbjct: 20 GTPLFVYDGDELGGRLLGLREQLH-PRLEIFYSLKANPNISVCALLHAHGARAEVSSMAE 78 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIG 119 ++ GE + K A + T++ + +L + A++ + Sbjct: 79 LITARRAGVAGEDIIFLGPGKSTSELAACLDEGVYTVVCESFGELKILDELARERGIEAR 138 Query: 120 LRINPSVS-YSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENKS 171 + + + S K + G + + + + G+ + Sbjct: 139 VALRVNPSFAVKGSGLTMGGKPRQFGIDEEQLLAATDLVDRHPNLRLMGVQVYMGTRILD 198 Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + + E+ ++ + +GGG+ +D L + Sbjct: 199 EEPIVENTRRIFELAERVSRRLGFPLDMVDVGGGLGVAYFDGERDLDRDLLASLLNPVID 258 Query: 224 KYSV-----QIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQE 277 +++ ++ +E G + + T V + +N + D H+ + Sbjct: 259 EFAQRHPATRLVMELGRYLAATSGTYVVRVRYTKTSLGQNFAVADGGTNHHMAAVGIGSY 318 Query: 278 S--------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 T V G C D+ + PV+ GD + Y Sbjct: 319 VKRDFPIRLLNRIDEPATETWQVTGPLCTPNDVLAKKAALPPVRPGDLVGVTRSGAYGPT 378 Query: 330 RKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 F P + + D Sbjct: 379 ASPVLFLSHGYPAEVIVHCGRHYLVSERDEPADLLRR 415 >gi|15724139|gb|AAL06466.1|AF411043_1 ornithine decarboxylase [Musca domestica] gi|1297346|gb|AAA98981.1| ornithine decarboxylase [Musca domestica] Length = 396 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 106/365 (29%), Gaps = 26/365 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D +L D VK A+KC + TL + +S E+ Sbjct: 32 LFVCDLTRLKEKYDMWTKYMPR--VKPYYAVKCNDDGHIVKTLAELGTNFDCASKGEIKQ 89 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + + K + ++ K + +R Sbjct: 90 VLDLGVHPDRIIFAQPCKPISHLEYAKEMGVMTSTVDTEFEIHKLHKHFPESNLVIRFRC 149 Query: 125 SVSYSKFILADPNRPFSR-LGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + +S V G FH + + + Sbjct: 150 EAKEAQCPLGDKFGCDAENEATSLMLLAKSLNLKVIGTSFHVGSGCNDLPAYDRAITIAK 209 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236 F ++ + +GGG +D + + + + ++ I EPG Sbjct: 210 NLFKFGALLGYEMNLLDIGGGFPGSDNKK-FEKIAEIVNKSLMRHFPDDKVNIIAEPGRF 268 Query: 237 IVTNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 V + TL + +++ V S + D+ + + Sbjct: 269 FVASAYTLICKIHAKGEARLPNGKLLTKMYYLNDGVYGSFNCILYDHQHAEVQHFVDEEN 328 Query: 286 GPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + G +C A D E +K GD ++F ++ Y I + FNG +P I Sbjct: 329 AEVPKFNSLIWGPTCDALDKIAEDLQLPDLKCGDFLAFPNMGAYTIPIASPFNGFMLPKI 388 Query: 343 AVKNV 347 + Sbjct: 389 LYFHK 393 >gi|222087145|ref|YP_002545680.1| ornithine decarboxylase protein [Agrobacterium radiobacter K84] gi|221724593|gb|ACM27749.1| ornithine decarboxylase protein [Agrobacterium radiobacter K84] Length = 377 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 103/359 (28%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ + A+K A + L +S+ E+ Sbjct: 18 PCLVVDLDVVRDNFRAFRHAMPDSA--IYYAVKANPAPEVLRLLASLGSNFDCASVAEIE 75 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ + A ++ ++ K A + Sbjct: 76 MALDAGATAARISFGNTIKKERDVARAHALGISLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + P + + + + G+ FH + + A L Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLESYGVSFHVGSQMTKVDAWDAAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + ++ F ++ +++GGG L+ Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKAIFASLRAHFGNQIPHTI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + V+ IS+ N + + + + Y Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTERD 311 Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD + E Y FNG Sbjct: 312 GDEM-EPCIIAGPTCDSADVLYEKNLYPLPVTLTIGDEVLIEGTGAYTTTYSAVAFNGF 369 >gi|6469279|emb|CAB61758.1| ornithine decarboxylase [Mucor circinelloides f. lusitanicus] Length = 433 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 55/374 (14%), Positives = 111/374 (29%), Gaps = 35/374 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D +++ + ++ A+KC + L G +S E+ Sbjct: 60 FFVGDLGEVVRQHIRWKSLLPR--IEPFYAIKCNPDPMVVQLLASLGCGFDCASKQEIQQ 117 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K + + + FK K ++ LRI Sbjct: 118 VLDVGVDPSRIIYANPCKQASFIRYSAQQNVSRMTFDNAEELFKIKKYYPDAELVLRILT 177 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN---KSFLCFSAMLKN 181 S S L + + NV G+ FH +F KN Sbjct: 178 DDSMSLCQLGLKFGAPLHTVQHLLQLAKELNLNVIGVSFHVGSGCLDENAFGDAVVRAKN 237 Query: 182 IEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSV---QIYLEPGEA 236 + + +++ +GGG D + L ++ ++ EPG Sbjct: 238 VFDQAKAMGYDFKFLDVGGGFPGADVKNGITFEKVAAVLGPIVDRLFPKDVRVIAEPGRY 297 Query: 237 IVTNTTTLNTTVLDISENIKNLVI--------------VDSSVEAHVPDYLLYQESATIY 282 V + L V+ N+ + + SV + D+ + + Sbjct: 298 YVASAFNLAVNVIGRRTNMAHQDQTDASPEYMYYVNDGMYGSVNCIIFDHQVVHPKVLMK 357 Query: 283 P---------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 Y + V G +C + D + ++ GD + FE++ + I + Sbjct: 358 NELFAYGQDLPEAQYESSVWGPTCDSIDCLNKSARLPKLEPGDWLYFENMGAHTICAASQ 417 Query: 334 FNGINMPTIAVKNV 347 FNG + + Sbjct: 418 FNGFRK-SEVLYTN 430 >gi|255936309|ref|XP_002559181.1| Pc13g07510 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583801|emb|CAP91820.1| Pc13g07510 [Penicillium chrysogenum Wisconsin 54-1255] Length = 448 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 106/360 (29%), Gaps = 31/360 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + VK A+KC + + Q +G +S E+ + Sbjct: 71 FYVADMGEVYR--QHMRWKMNLGRVKPFYAVKCNPDPEVLRLMAQLGNGFDCASKSEIDM 128 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K S + +K KA ++ LRI Sbjct: 129 ALQTGIDPSRIIYAQPCKTKSYLRYASEVGVKQMTFDNADELYKIKATFPEAELYLRILT 188 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + V G+ FH + F +++ Sbjct: 189 DDSTSLCRLSMKFGASMDQARMLLELAYKLELKVVGVSFHVGSGAEDPRAFLKAVQDARM 248 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F ++ + +GGG + + + + +++ EPG V Sbjct: 249 VFDQAAEIGHELHTLDVGGGFCQDTFEKFAGILGEAVDTYFPPN-IRVIAEPGRYYVATA 307 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288 TL V+ + + ++ D + S I+ + P Sbjct: 308 YTLAANVIARRDIPDPDDPSRDAFMLYLNDGVYGNFSNIIFDHQHPVAQVLTCAADSPPG 367 Query: 289 ----------TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 T + G +C D+ E + GD + FE++ Y FNG Sbjct: 368 SPNSATSEDITYSIWGPTCDGIDVISERIALPGLLNTGDWLYFEEMGAYTKCSATRFNGF 427 >gi|109103106|ref|XP_001084503.1| PREDICTED: ornithine decarboxylase isoform 2 [Macaca mulatta] Length = 461 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 65/392 (16%), Positives = 120/392 (30%), Gaps = 41/392 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L ++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLNALPRVTPFYAVKCNDSKAIMKTLAAVGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLRVPPERIIYANPCKQVSQTKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ R R ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCCLSVKFRATLRNSRLLLERAKEVNIDVVGVSFHAGSGCTDPETFVQAISDTRC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + + F V+I +PG Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITSIINPALDRYFLSDSGVRIIAKPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270 V + TL ++ ++ + AHV Sbjct: 278 YYVASAFTLAVNIISKKIVLKEQTGSDDEDESSEQTFMCYVNYGVYGSFNCILYDHAHVK 337 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y++ + G C D E + +GD + FE++ Y + Sbjct: 338 PLLQKRPKPD----KKYYSSSIWGPICDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + FNG P I + ++F D+ Sbjct: 394 ASTFNGFQRPVIYYVMSGPAWQLTQQFQNPDF 425 >gi|259496073|gb|ACW82828.1| ornithine decarboxylase [Spodoptera litura] Length = 448 Score = 159 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 111/360 (30%), Gaps = 25/360 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D +++ + V+ A+KC + TL G +S E+ Sbjct: 35 PFYVMDLGEVVARYHRWKELMPR--VEPFYAVKCNDDKLLVSTLAALGTGFDCASKAEIE 92 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + + A D + F++ ++L K K I +R Sbjct: 93 LVTSIGVAPDRIIFANPAKMASHIRFASAVGVDVMTFDSETELMKIKQYMPHAQLVIRIR 152 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + + P + K +V G+ FH ++ + Sbjct: 153 CDAASAQCPLGIKFGCDPVTEAPRLLK-LAAVFGLDVIGVSFHVGSGASETDVYARAIAL 211 Query: 182 IEKEF---GHFITQ-IEWISLGGGIH---FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 F + + + + +GGG T L+E + SV++ EPG Sbjct: 212 SRALFLVGHNVGHKAMRILDIGGGFPGGTHTSIQEVSAVINSALEEHFPERSVRVIAEPG 271 Query: 235 EAIVTNTTTLNTTVLD------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 TL V V S + D+ Sbjct: 272 RYFAAAAYTLAAMVHAKREVTSKECADETHTMYFINDGVYGSFNCVLYDHQHVVAEPLND 331 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + P V G +C D + IGD + F D+ Y + + FNG +PT+ Sbjct: 332 NGSVPAPCSVWGPTCDGLDCVLPATRLPSLAIGDWLIFRDMGAYTLPVASPFNGFPVPTV 391 >gi|254463855|ref|ZP_05077266.1| Orn/DAP/Arg decarboxylases family 2 [Rhodobacterales bacterium Y4I] gi|206684763|gb|EDZ45245.1| Orn/DAP/Arg decarboxylases family 2 [Rhodobacterales bacterium Y4I] Length = 389 Score = 159 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 59/362 (16%), Positives = 120/362 (33%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +ID + ++ A+K A + +TL + ++S E+ Sbjct: 31 PTLVIDSHAVARQYQALDRGLGR--ARIHYAVKANPAPEVLETLVRLGSNFDAASRAEIE 88 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E + K A F +Q K + LR+ Sbjct: 89 MCLAAGARAEQITFGNTIKRPADIAFAHGIGITHFAADAQEELEKLAEFAPGAHVCLRVI 148 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S + + L+ + + D V+GL FH + + L ++ +L + Sbjct: 149 VEASGADWPLSRKFGSSASMALSLMDAAAGLGLTVHGLSFHVGSQTRDPLMWAPVLDQVA 208 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPV--KDFCQRLKEFSEKYSVQ---IYLEPGE 235 + + ++ +++GGG + K + +D+ + + E + + EPG Sbjct: 209 EVWTAGRAAGHDLKLVNIGGGFPASYKTEVMGAEDYARAVMEQVDARFPDAAEVMAEPGR 268 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287 +V + VL +S + + S + + + + YQ T + Sbjct: 269 GLVAEAGAIAAEVLLVSRKHADDMFRWVYLDIGKFSGLAETMDEAIRYQ-ITTSREHEPT 327 Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343 ++ G SC + D+ E +K GDR+ Y + FNG + Sbjct: 328 GPCVLAGPSCDSADVLYEKQLVQLPLGLKAGDRVVIHSCGAYTSTYASVGFNGFPPLDVV 387 Query: 344 VK 345 V Sbjct: 388 VI 389 >gi|413768|gb|AAA88795.1| ornithine decarboxylase [Caenorhabditis elegans] Length = 422 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 51/380 (13%), Positives = 117/380 (30%), Gaps = 34/380 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + L+D K++ + ++ A+KC + L G +S E+ + Sbjct: 42 FMLVDLDKIIERFQLWKR--ELPMIEPFYAVKCNTDLVLIRILASLGCGFDCASKDEIDI 99 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K A + D + + K + ++ LRI Sbjct: 100 VMGTGVSAERIIYANPCKTRSFIAHAMDRDVKMMTFDNPEELLKIAKLHPNAEMILRIAV 159 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 S + L ++ E NV G+ FH + L++ Sbjct: 160 SDPTATCPLNLKFGADPI--IAAPQLLKTASEEGINVVGISFHVGSGCNDASAYRNALQH 217 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI--------- 229 + +++ I +GGG + P + + +++ +++ Sbjct: 218 AKNLCEIGEGLGFKMDIIDMGGGFPGAEHHNPFEKIAETIRDALDEFFPDTNKRLYREPG 277 Query: 230 -YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP- 287 + G + T V D ++ D + + ++ + P Sbjct: 278 RFFAAGPFSLVANIIHATEVPASKITKDPKDCADHGYMYYINDGVYGSFNCILFDHAHPI 337 Query: 288 ------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + + G +C + D+ + + +G+ + + D+ Y + FN Sbjct: 338 GSPLFDTDRNEKFMSTIWGPTCDSLDLVEDKKLMPKMNVGEWLYYPDMGAYTLAAATTFN 397 Query: 336 GINMPTIAVKNVDGTIKAIR 355 G + P + ++IR Sbjct: 398 GFSKPVPMYVMSEEMWESIR 417 >gi|289449867|ref|YP_003474367.1| carboxynorspermidine decarboxylase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184414|gb|ADC90839.1| carboxynorspermidine decarboxylase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 460 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 153/290 (52%), Gaps = 9/290 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P ++ID+Q L NL +++ G K+LLA K FA + + + QY+DGTT+S LY Sbjct: 18 LPSPAFIIDEQLLTANLKKLHLVKEKTGCKILLAQKAFATFSTYPLIGQYLDGTTASGLY 77 Query: 62 EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--I 118 E LGHE+ G E H ++ + EI +L D I+FN+ SQ F+D+ + Sbjct: 78 EARLGHEEMPGREIHCFSPGFTKYEIGQLLDFTDHIVFNSFSQWLTFRDQIKFATHPVSC 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENKSFLC 174 GLRINP S L DP SRLG + D ++ ++ + GL FH CE S Sbjct: 138 GLRINPEYSEVATALYDPCSSSSRLGIRLNDFLDGAAKGLLEGIEGLHFHCLCEQGS-DA 196 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + +++ FG F+ +++WI++GGG H T DY + C +K+ + + +YLEPG Sbjct: 197 LLHTWEVVKRNFGSFLPKMKWINMGGGHHITKDDYDLDTLCSVIKDAQNSFGLTVYLEPG 256 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283 EA+ N L TVLD+ + + D+S H+PD L ++P Sbjct: 257 EAVALNAGFLKATVLDVVPSGDMPCAILDTSAACHMPDVLEMPYQPRVFP 306 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 31/79 (39%), Positives = 49/79 (62%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 Y + G +CLAGD+ G ++F P+ GD++ F D+A Y++ + N FNG+ +P I + Sbjct: 382 YPYRLAGPTCLAGDVIGSYNFPAPLFPGDQVFFCDMAIYSMVKTNTFNGMPLPAIVLLQP 441 Query: 348 DGTIKAIREFSYNDYYNNL 366 DG + +R FSY D+ N L Sbjct: 442 DGKVTVLRRFSYADFRNRL 460 >gi|319406162|emb|CBI79799.1| lysine/ornithine decarboxylase [Bartonella sp. AR 15-3] Length = 377 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 109/359 (30%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ A+K A + L ++S+ E+ Sbjct: 18 PCLVVDLDVVHENYLNFEKALPQS--RIFYAIKANPAPEILRLLVSLGSSFDAASIAEIE 75 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E + ++ + A + ++ K A + Sbjct: 76 MALEAGATADRISFGNTIKKERDIARAYAFGVSLYAVDCFEEVEKVACAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + P + + + G+ FH + + L Sbjct: 136 TDGEGAEWPLSQKFGCVPSMAVDV----LRYAHHLGLQACGVSFHVGSQQTDLNAWDRAL 191 Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIY 230 + F Q++ +++GGG LK++ + Sbjct: 192 SDTAFVFRSLEQEGIQLQLVNMGGGFPTRYLKDIPTVQTYGMAIFDSLKKYFGNRIPETI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG A+V N + T V+ IS+ + + + + + + + Y T Y Sbjct: 252 IEPGRAMVGNAGVIRTEVVLISKKATSDNVRWVYLDVGKFNGLTETMDEAIRYP-IETAY 310 Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + DI E + + IGD + Y + FNG Sbjct: 311 DDKAMEPCILAGPTCDSADIMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASVAFNGF 369 >gi|67479463|ref|XP_655113.1| ornithine decarboxylase [Entamoeba histolytica HM-1:IMSS] gi|56472227|gb|EAL49727.1| ornithine decarboxylase, putative [Entamoeba histolytica HM-1:IMSS] gi|60686955|gb|AAX35675.1| ornithine decarboxylase [Entamoeba histolytica] Length = 413 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 119/352 (33%), Gaps = 25/352 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D + + ++ V+ A+KC + L + G +SL E+ Sbjct: 28 FWIFDTEGVEKAVERWKK--NMPTVRPCFAVKCNPEPHLVKLLGELGCGFDCASLNEIKE 85 Query: 66 GHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + F E Y+ +K +A + I +++ ++ K A K+ I + Sbjct: 86 VLDLGFNPEDITYSQTFKPYNQLIEASHLGINHTIVDSIDEVQKIAKYAPKMGIMIRIM- 144 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAML 179 S + K+ I+ + N++G+ FH ++ + F Sbjct: 145 ENDTSAGHVFGEKFGLHDDEVEIVLKE-IKDKGLNLDGVHFHVGSDSHNSEVFTKALTKA 203 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-RLKEFSEKYSVQIYLEPGEAIV 238 +N F + I +GGG + +KE + EPG + Sbjct: 204 RNTVTLAEQFGMKPYLIDIGGGFSQVAPFEEFAATIEKTIKELEFPERTRFIAEPGRYMA 263 Query: 239 TNTTTLNTTV----LDISENIKNLVIVDSSVEAHVPDYLLYQES--------ATIYPNTG 286 +N L +++ + I K + ++ E + NT Sbjct: 264 SNAFHLVSSLHGKRVRIQNGKKQIEYTSGDGLHGSFGCCIWFEKQKSCECITQKVNENTK 323 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIG-DRISFEDVAGYNINRKNWFNGI 337 Y +++ G SC D ++ G D + F ++ Y I+ FNG Sbjct: 324 MYESIIYGPSCNGSDKVAT-QELPEMEPGKDWLLFPNMGAYTISMATNFNGF 374 >gi|302654764|ref|XP_003019181.1| ornithine decarboxylase, putative [Trichophyton verrucosum HKI 0517] gi|291182888|gb|EFE38536.1| ornithine decarboxylase, putative [Trichophyton verrucosum HKI 0517] Length = 460 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 58/389 (14%), Positives = 107/389 (27%), Gaps = 42/389 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + +G +S E+ Sbjct: 73 PFYVADLGEVYRQHIRWKTNLPR--VKPFYAVKCNPNPQVLRLMAVLGNGFDCASKAEID 130 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L Y K S + +K K ++ LRI Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKEMCPDAELYLRIL 190 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + NV G+ FH + F +++ Sbjct: 191 TDDSASLCRLSMKFGASLSSARPLLELAHGLGLNVVGVSFHVGSGAEDPKSFIKAVQDAR 250 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L + + +++ EPG V Sbjct: 251 FVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGDALDTYFPPH-IRVIAEPGRYYVAT 309 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATI-------------- 281 TL V+ + + DS ++ P + Sbjct: 310 AFTLAANVIARRDVGVEEPLSDSESDSTTPSRASTPSSSGAYMIYLNDGVYGNFSNIVFD 369 Query: 282 -------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYN 327 + P + G +C D+ E + +G+ + FE++ Y Sbjct: 370 HQHPVAQILTKDDDYTSAPIEYSIWGPTCDGIDVISERVTLNGLLGVGNWLYFENMGAYT 429 Query: 328 INRKNWFNGI--NMPTIAVKNVDGTIKAI 354 FNG I + G + Sbjct: 430 QCSATRFNGFTDKHEVIYIVTEPGAAALL 458 >gi|241654744|ref|XP_002411340.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215503970|gb|EEC13464.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 442 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 60/374 (16%), Positives = 113/374 (30%), Gaps = 24/374 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D L +D A A+KC + + L G +S+ E+ Sbjct: 60 PFYVVDIDDLFYRMDLWRKSIPRAA--PYYAVKCNDNPVVLEVLAGSGLGFDCASINEIE 117 Query: 65 -LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + Y K + + S +K K ++ LR+ Sbjct: 118 TMIALGVDPSRIIYAHPQKHVSFIRRARDLGVDLVTFDSSEELYKIKEHHPTCRVVLRLR 177 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAMLK 180 + F + D + + + V G+ FH N+ F A + Sbjct: 178 VDNDKAWFAMGDKFGCTDKEAVQLLRLAKDLQLAVVGICFHVGSSNQDPTAFAGAIAGAR 237 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234 + + +GGG + P+ + K F E Y V I EPG Sbjct: 238 RAFDAARAMGFDVTLLDIGGGYPGEKESEPIFLKTADIINEGLEKYFPESYGVNIISEPG 297 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES------------ATIY 282 V + TL ++ N + ++ + + + Sbjct: 298 TFFVHSAFTLFAKIIGKRINEGQNNTKPRQMMYYINESVYKSFVVSLFNDDPVEPLPLMD 357 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + + ++V G +C D + +G + FE++ Y I FNG I Sbjct: 358 SDGPLHESIVWGITCDGLDKIKASCKLPELSVGQWLMFENMGAYTITLNTPFNGFPSADI 417 Query: 343 AVKNVDGTIKAIRE 356 ++ +R Sbjct: 418 VYRSSKLVEDHLRR 431 >gi|162455320|ref|YP_001617687.1| hypothetical protein sce7038 [Sorangium cellulosum 'So ce 56'] gi|161165902|emb|CAN97207.1| lysA [Sorangium cellulosum 'So ce 56'] Length = 427 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 51/386 (13%), Positives = 102/386 (26%), Gaps = 32/386 (8%) Query: 10 DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68 D ++ + G +A+K + G ++SL EV L Sbjct: 34 DLGRMRARIGRIGAAFP-PGALHTVAIKANPLVEVLRAAVDCGAGLEAASLEEVKLSLAA 92 Query: 69 KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGLRINPS 125 + Y + A +I L I + + +L + + +IGLRINP Sbjct: 93 GCPPDRIVYDSPAKSRADIAEALRLGVRINADNLDELGRIDELVGHGGAASRIGLRINPQ 152 Query: 126 VSYSKFILADPNRPFSRLGEKCKDKI-----ESEIKNVNGLMFHNNCE----NKSFLCFS 176 V S L S+ G + + + GL H + ++ Sbjct: 153 VGASSIALTSVADRRSKFGVPLEQADAVRAAFARYAWLAGLHVHVGSQGCALSQLIDGIG 212 Query: 177 AMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKD----FCQRLK---EFSEKYSVQ 228 + ++ + +GGG+ + + L+ + Sbjct: 213 RVEALRQELRRAMGPLAAGTMDIGGGLPVAYRSTDRPPALEDYAAALRREVPTLFEEGTT 272 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV--PDYLLYQESATIYPNTG 286 + E G I + V + ++ + + Y Sbjct: 273 LITEFGRWIQAGCGFAVSRVEYVKKDSAGRTAILHLGADFLLRRAYHPDDWHHDFMALDP 332 Query: 287 PY--------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + G C GD+ + GD + D Y ++ + Sbjct: 333 EAEPKGGPLSPCTLGGPLCFGGDVLARELAFPELSPGDLVLIRDTGAYTLSMWSRHCSRG 392 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 +P + + D D Sbjct: 393 IPAVLGVDADDLRVLRERELPEDVVA 418 >gi|302868326|ref|YP_003836963.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Micromonospora aurantiaca ATCC 27029] gi|302571185|gb|ADL47387.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Micromonospora aurantiaca ATCC 27029] Length = 384 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 49/373 (13%), Positives = 105/373 (28%), Gaps = 32/373 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+YL D + + + + GV L A+K + L +DG +S E+ Sbjct: 13 TPFYLYDFAAVRHRVAELRAALPD-GVLLHYAIKANPMPALVQRLAPLVDGLDVASHGEL 71 Query: 64 MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E ++ +D E+ A ++ + + +L + + + + + Sbjct: 72 LTALGTAVDREQISFAGPGKRDPELAAAIAAGVVVNVESGDELARLRRIETAVGRSVRFA 131 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFL--- 173 + + + ++ G + + + GL +N Sbjct: 132 LRVNPDFQLSGSGMTMGGGATQFGIDAEAVGEVLRGPGRRGLCGLHIFAGSQNLRLDALT 191 Query: 174 -CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---------YPVKDFCQRLKEFSE 223 S + ++ + +++GGG+ Y + + Sbjct: 192 TGVSQTFELADRLVREHRLDLAHVNIGGGLGIPYFPRDEALDLAAYGRHLAVEVERWRRR 251 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY------QE 277 + LE G +V + V++ + +V H + Sbjct: 252 HPDTAVVLELGRYLVGEAGVFVSRVVERKHSRGETFLVVDGGMHHHLAASGNFGQVVRRN 311 Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN- 332 P T V G C D G ++GD + Y Sbjct: 312 YPVSAVTAKPADERETVTVVGPLCTPLDTLGRRVELPRCEVGDLVVVHQSGAYGPTASPV 371 Query: 333 WFNGINMPTIAVK 345 F G P + Sbjct: 372 HFLGHPAPVEVLL 384 >gi|221130673|ref|XP_002157770.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 444 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 106/364 (29%), Gaps = 25/364 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ + ++ V+ A+KC + L +S E+ Sbjct: 45 PFYICNLDDVVRKYWKFQEHL--PQVQPFFAVKCNPDPVIIALLAYLGVNFDCASKGEIK 102 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E + K + + ++ +K K ++ +R+ Sbjct: 103 AVLDLGVDPERIIFANPCKQNSFIKYANEKNVKKMTFDNEAELYKIKQHFPDAELVIRLK 162 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S EK + + NV G+ FH + +K Sbjct: 163 VDDSKSSCQFGIKFGATLESAEKLLNIAKELGLNVIGVSFHVGSGCYDASLYYDAVKLSA 222 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEPG 234 F + +GGG + + K F + +V+I EPG Sbjct: 223 TVFEQAENLGFNFTLLDIGGGFPGVEGGKISFELTASQLNLGIEKFFPPERNVRIIAEPG 282 Query: 235 EAIVTNTTTLNTTVLDIS-----------ENIKNLVIVDSSVEAHVPDYLLY-QESATIY 282 V + TL V I V S + D+ + Sbjct: 283 RYFVASAFTLTCNVTSIREVSTNKNSPPGFMYYLNDGVYGSFNCILFDHQSPTPLTLHET 342 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + Y + G +C + D + + + IGD + FE++ Y I FNG P + Sbjct: 343 DHCPRYKCSLWGPTCDSMDCISKDSYLPKLMIGDWLYFENMGAYTIAPSIKFNGF-KPPV 401 Query: 343 AVKN 346 Sbjct: 402 VFYM 405 >gi|170046132|ref|XP_001850632.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167869005|gb|EDS32388.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 433 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 59/372 (15%), Positives = 106/372 (28%), Gaps = 23/372 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +LI+ L+ ++R V A+K + T G +S E+ Sbjct: 37 PLHLIELDNLIK--QHYAWLRHLPRVNPFYAIKSNDEPTIVATSVLLGIGYDCASKSELK 94 Query: 65 LGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E + A + + +F++ +L K + + I + Sbjct: 95 RVLAHGVNSEKIIFAQPAKTIEALKFARESKVRTVFDSEFELKKIQQYYPEAELLIRYKF 154 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S + P + + NV G F+ F +K Sbjct: 155 DSKNSRATLGTKFGCNPDTEAPHLL-QIAKELGLNVVGWCFNVGSACSDADIFYHAIKKG 213 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + ++ LGGG + Y V + F+ + EPG Sbjct: 214 RQLCDLAAALGFHFKFFDLGGGFAGDIERYAVHINAALDEFFAIDEECTVIAEPGRYYCA 273 Query: 240 NTTT-----LNTTVLDISENIKNLVIVDSSVEAHVPDYLLY----------QESATIYPN 284 TT VL +E + + + + I + Sbjct: 274 ATTINVVSIHGKKVLYNAEVPTQIEHIYYYLNDGLSGTFYGVRSDNDPVNPIAWKKINNS 333 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 Y G +C GD FG + I DR+ F + Y FNG +P + Sbjct: 334 QPRYKTTFFGPTCDNGDRFGTGIELPELDISDRLVFPNHGAYTRVYATTFNGFCLPKTVI 393 Query: 345 KNVDGTIKAIRE 356 + K + + Sbjct: 394 FIRQSSWKLLEQ 405 >gi|28627544|gb|AAL83709.1| putative ornithine decarboxylase 1 [Capsicum annuum] Length = 435 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 110/362 (30%), Gaps = 26/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ +D V A+KC L +S E+ Sbjct: 68 PFYVLDLGEVVSLMDQWNVAL--PNVHPFYAVKCNPEPSFLSMLAAMGSNFDCASRAEIE 125 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + K A + +++ ++ K K K + ++ Sbjct: 126 YVLSLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPKCELLLRIK 185 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177 + + E ++ V+G+ FH N +A Sbjct: 186 PMNDGNARCPMGPKY-GALPEEIEPLLRIAQASRLTVSGVSFHIGSGDADSNAYLGAIAA 244 Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + E ++++ + +GGG + FS + + I EPG Sbjct: 245 AKQVFETAAKFGMSKMNVLDIGGGFTSGHQFTTAATAVKSALQQHFSNEPELTIIAEPGR 304 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPN------ 284 TL TT++ S+ + D+ + + Sbjct: 305 FFAETAFTLATTIIGKRVRGDLREYWINDGLYGSMNCVLYDHATVTATPLACMSNRVNLN 364 Query: 285 ---TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + + + G +C A D + +++ D + F ++ Y + FNG N Sbjct: 365 CSGSKMFPSTIFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTSA 424 Query: 342 IA 343 I Sbjct: 425 IV 426 >gi|315505294|ref|YP_004084181.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Micromonospora sp. L5] gi|315411913|gb|ADU10030.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Micromonospora sp. L5] Length = 384 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 49/373 (13%), Positives = 105/373 (28%), Gaps = 32/373 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+YL D + + + + GV L A+K + L +DG +S E+ Sbjct: 13 TPFYLYDFAAVRHRVAELRAALPD-GVLLHYAIKANPMPALVQRLAPLVDGLDVASHGEL 71 Query: 64 MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E ++ +D E+ A ++ + + +L + + + + + Sbjct: 72 LTALGTAVDREQISFAGPGKRDPELAAAIAAGVVVNVESGDELARLRRIETAVGRSVRFA 131 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFL--- 173 + + + ++ G + + + GL +N Sbjct: 132 LRVNPDFQLSGSGMTMGGGATQFGIDAEAVGEVLRGPGRRGLCGLHIFAGSQNLRLDALT 191 Query: 174 -CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---------YPVKDFCQRLKEFSE 223 S + ++ + +++GGG+ Y + + Sbjct: 192 TGVSQTFELADRLVREHRLDLAHVNIGGGLGIPYFPRDEALDLAAYGRHLAVEVEQWRRR 251 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY------QE 277 + LE G +V + V++ + +V H + Sbjct: 252 HPDTAVVLELGRYLVGEAGVFVSRVVERKHSRGETFLVVDGGMHHHLAASGNFGQVVRRN 311 Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN- 332 P T V G C D G ++GD + Y Sbjct: 312 YPVSAVTAKPADERETVTVVGPLCTPLDTLGRRVELPRCEVGDLVVVHQSGAYGPTASPV 371 Query: 333 WFNGINMPTIAVK 345 F G P + Sbjct: 372 HFLGHPAPVEVLL 384 >gi|118384|sp|P27120|DCOR1_XENLA RecName: Full=Ornithine decarboxylase 1; Short=ODC 1; Short=xODC1 gi|64954|emb|CAA39760.1| ornithine decarboxylase [Xenopus laevis] Length = 460 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 60/378 (15%), Positives = 118/378 (31%), Gaps = 42/378 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + V A+KC + TL+ G +S E+ L Sbjct: 40 FYVADFGDIVK--KHVRWFKALPRVTPFYAVKCNDGKAIVKTLSILGAGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++C S++ K + K+ LRI Sbjct: 98 VQSIGVSPERIIYANPCKQVSQIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + ++ G+ FH + + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNVDIIGVSFHVGSGCTDPQTYVQAVSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAELGFNMHLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVKIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL--------------------------DISENIKNLVIVDSSVEAHV 269 V ++ TL ++ +++ + AHV Sbjct: 278 YYVASSFTLAVNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVNDGVYGSFNCILFDHAHV 337 Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 L + Y++ + G +C D E +++GD + FE++ Y + Sbjct: 338 KPVLTKKPKPD----EKFYSSSIWGPTCDGLDRIVERFELPELQVGDWMLFENMGAYTVA 393 Query: 330 RKNWFNGINMPTIAVKNV 347 + FNG PT+ Sbjct: 394 AASTFNGFQRPTLYYVMS 411 >gi|302507226|ref|XP_003015574.1| ornithine decarboxylase, putative [Arthroderma benhamiae CBS 112371] gi|291179142|gb|EFE34929.1| ornithine decarboxylase, putative [Arthroderma benhamiae CBS 112371] Length = 460 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 58/389 (14%), Positives = 107/389 (27%), Gaps = 42/389 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + +G +S E+ Sbjct: 73 PFYVADLGEVYRQHIRWKTNLPR--VKPFYAVKCNPNPQVLRLMAVLGNGFDCASKAEID 130 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L Y K S + +K K ++ LRI Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKEMFPDAELYLRIL 190 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + NV G+ FH + F +++ Sbjct: 191 TDDSASLCRLSMKFGASLSSARPLLELAHGLGLNVVGVSFHVGSGAEDPKSFIKAVQDAR 250 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L + + +++ EPG V Sbjct: 251 FVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGDALDTYFPPH-IRVIAEPGRYYVAT 309 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATI-------------- 281 TL V+ + + DS ++ P + Sbjct: 310 AFTLAANVIARRDVGVEEPLSDSESDSTTPSRASTPSSSGAYMIYLNDGVYGNFSNIVFD 369 Query: 282 -------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYN 327 + P + G +C D+ E + +G+ + FE++ Y Sbjct: 370 HQHPVAQILTKDDDYTSAPIEYSIWGPTCDGIDVISERVTLNGLLGVGNWLYFENMGAYT 429 Query: 328 INRKNWFNGI--NMPTIAVKNVDGTIKAI 354 FNG I + G + Sbjct: 430 QCSATRFNGFSDKHEVIYIVTEPGAAALL 458 >gi|1781297|emb|CAA71498.1| ornithine decarboxylase [Nicotiana tabacum] Length = 433 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 113/362 (31%), Gaps = 26/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ +D ++ A+KC L+ +S E+ Sbjct: 66 PFYVLDLGEVVSLMDQWKSAL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K A + +++ ++NK + K + ++ Sbjct: 124 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVNKIRKHHPKSELLLRIK 183 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177 + + + ++ V+G+ FH N +A Sbjct: 184 PMLDGNARCPMGPKY-GALPEEVDPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAA 242 Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + E ++++ + +GGG V + F ++ + I EPG Sbjct: 243 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQHFDDEPELTIIAEPGR 302 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA---------TI 281 L TT++ + S+ + D+ + Sbjct: 303 FFAETAFALATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVLSNRSNVT 362 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + V G +C A D + +++ D + F ++ Y ++ FNG N Sbjct: 363 CGGSKKFPTTVFGPTCDAFDTVLRDYQLPELQVNDWLVFPNMGAYTKAAESNFNGFNNSA 422 Query: 342 IA 343 I Sbjct: 423 IV 424 >gi|119500932|ref|XP_001267223.1| ornithine decarboxylase [Neosartorya fischeri NRRL 181] gi|119415388|gb|EAW25326.1| ornithine decarboxylase [Neosartorya fischeri NRRL 181] Length = 453 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 111/360 (30%), Gaps = 31/360 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + VK A+KC + + + +G +S E+ L Sbjct: 76 FYVADMGEIYR--QHLRWKMNLGRVKPFYAVKCNPDPEILRLMAKLGNGFDCASKAEIDL 133 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K + + +K KA ++ LRI Sbjct: 134 ALETGIDPSRIIYAQPCKTKSYLRYAAKVGVKQMTFDNADELYKIKACYPDAELYLRILT 193 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + + + V G+ FH + F +++ Sbjct: 194 DDSTSLCRLSMKFGASLDIARQLLELAHELELKVVGVSFHVGSGAEDPRAFLKAVQDARL 253 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F ++ + +GGG + + L + + +++ EPG V + Sbjct: 254 VFDQAAEVGHELHTLDVGGGFCQDTFEKFAGILSEALDTYFPPH-IRVIAEPGRYYVASA 312 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288 TL V+ + + + ++ D + S I+ + P Sbjct: 313 FTLAANVIARRDVRDPEDPANDAYMLYLNDGVYGNFSNIIFDHQHPVAKILTCSGETQPS 372 Query: 289 ----------TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C D+ + + +GD + FE++ Y FNG Sbjct: 373 ALNAATSEGIAYSIWGPTCDGIDVITQRIVLPGLLDVGDWLYFEEMGAYTKCSATRFNGF 432 >gi|328876086|gb|EGG24450.1| group IV decarboxylase [Dictyostelium fasciculatum] Length = 466 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 61/422 (14%), Positives = 110/422 (26%), Gaps = 58/422 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP++L + + N + +N A+K + D L Q G SS Sbjct: 35 DTPFHLYNGDMIAENARHMIKSFRNHFTHYTNYFAVKATPNPHLLDLLKQQGMGVDCSSF 94 Query: 61 YEVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E++L + F G+ + D E I + ++Q++ K Sbjct: 95 AELILSQKVGFKGDEIMFTSNNTPDKEYQLAYELGAVINLDDITQIDAMKQALGGEKMPR 154 Query: 119 GLRINPSVSYSKFILADPNRP-FSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS 171 + + + K A P ++ G +++ + GL Sbjct: 155 MVSLRYNPGPLKQGNAIIGEPQEAKFGLTAAQLPEAYAKLKALGVDRFGLHCMVASNELQ 214 Query: 172 FLCFSAMLKNIEKEFGH-----FITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222 F K + E I+LGGGI K QR+ Sbjct: 215 LDYFEETAKLLFNTVAELSRSPMSLTFEMINLGGGIGIPYRPGQKPVDFVQLAQRIANQY 274 Query: 223 EK-----------------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265 ++I E G + L T + K V VD+ + Sbjct: 275 NNIILPLLSDQQQYVNANIKEIKIVTECGRVVTGPYGCLITKAIHHKSTYKQYVGVDACM 334 Query: 266 EAHVPDYLLYQESATIY-------------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV 312 + + + G C D F + Sbjct: 335 VNLMRPGMYGAYHHITVLKQNNQNNQNNQNNQNNNNLYDIVGSLCENNDKFAVNRSLPNI 394 Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK--------AIREFSYNDYYN 364 + GD + D + + +NG + R + +D + Sbjct: 395 EKGDILVIHDSGAHGHSMGFNYNGKTRSAEYLFTTTNNNNNETKTFTCIRRGETLDDLFT 454 Query: 365 NL 366 L Sbjct: 455 TL 456 >gi|195972769|dbj|BAG68504.1| ornithine decarboxylase [Aspergillus oryzae] Length = 447 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 111/355 (31%), Gaps = 26/355 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + V+ A+KC + + + +G +S E+ + Sbjct: 75 FYVADMGEVYR--QHLRWKMNLSRVRPFYAVKCNPDPEILRLMAKLGNGFDCASKAEIDM 132 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K + + +K KA ++ LRI Sbjct: 133 ALDTGIDPSRIIYAQPCKTKSYLRYAAQMGVKQMTFDNADELYKIKACFPDAELYLRILT 192 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + + + V G+ FH + F +++ Sbjct: 193 DDSTSLCRLSMKFGASLDIARQLLELAHELELKVVGVSFHVGSGAEDPTAFVKAVQDARM 252 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F ++ + +GGG + + L + + +++ EPG V Sbjct: 253 VFDQAAEIGHELHTLDVGGGFSGDTFEKFAGVLSEALDTYFPPH-IRVIAEPGRYYVATA 311 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288 TL V+ + + + ++ D + S I+ + P Sbjct: 312 FTLAANVIARRDVRDPEDPANDAYMIYLNDGVYGNFSNIIFDHQHPVAQILTCANASNAA 371 Query: 289 -----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C D+ + + +GD + FE++ Y FNG Sbjct: 372 TSAGIAYSIWGPTCDGIDVISQRITLPGLLDVGDWLFFEEMGAYTKCSATRFNGF 426 >gi|53749692|ref|NP_001005441.1| ornithine decarboxylase 1 [Xenopus (Silurana) tropicalis] gi|49257730|gb|AAH74547.1| ornithine decarboxylase 1 [Xenopus (Silurana) tropicalis] Length = 460 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 60/374 (16%), Positives = 113/374 (30%), Gaps = 34/374 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + V A+KC + + TL+ G +S E+ L Sbjct: 40 FYVADLGDIVK--KHVRWFKALPRVTPFYAVKCNDSKAIVKTLSLLGAGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++C S++ K + K+ LRI Sbjct: 98 VQSIGVSSERIIYANPCKQVSQIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + + G+ FH + + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNVEIIGVSFHVGSGCTDPQTYVQAVSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V I EPG Sbjct: 218 VFDMGAELGFSMHLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPVDSGVTIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY----------------QESA 279 V + TL ++ + D +A L+Y Sbjct: 278 YYVASAFTLAVNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVNDGVYGSFNCILFDHAHV 337 Query: 280 TIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 P + + G +C D E +++GD + FE++ Y + + Sbjct: 338 KPVLTKKPKPDESFYSSSIWGPTCDGLDRIVERFDLPELQVGDWMLFENMGAYTVAASST 397 Query: 334 FNGINMPTIAVKNV 347 FNG PT+ Sbjct: 398 FNGFQRPTLYYVMS 411 >gi|240851013|ref|YP_002972413.1| ornithine decarboxylase [Bartonella grahamii as4aup] gi|240268136|gb|ACS51724.1| ornithine decarboxylase [Bartonella grahamii as4aup] Length = 377 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 107/357 (29%), Gaps = 29/357 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ A+K A + L ++S+ E+ Sbjct: 18 PCLIVDLDVVRDNYLNFEKALPQS--RIFYAIKANPAPEILRLLASLGSSFDAASVAEIE 75 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E ++ + A + V ++ K A + Sbjct: 76 MALKAGATSERISFGNTIKKERDIARAYALGVSLYAVDCVEEVEKIARVAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + P + + G+ FH + + L + Sbjct: 136 TDGKGAEWPLSRKFGCVP--AMAVDVLRRAHQLGLQAYGVSFHVGSQQVDLSAWDRALSD 193 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 F + +++GGG + LK+ + +E Sbjct: 194 AATVFKRLEQEGISLRLVNMGGGFPTRYLKDVPTEQAYGTAVFDSLKKHFGNRIPETIIE 253 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284 PG A+V N + T V+ IS+ N + + + + + + Y T + + Sbjct: 254 PGRAMVGNAGVIRTEVVLISKKADNDNVRWVYLDIGKFNGLAETMDEAIRYP-IETPHDD 312 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 ++ G +C + D+ E + + IGD I Y + FNG Sbjct: 313 KVMEPCILAGPTCDSADVLYEKTPYPLPLSLTIGDEILIHGTGAYTTTYASVAFNGF 369 >gi|220921641|ref|YP_002496942.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060] gi|219946247|gb|ACL56639.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060] Length = 388 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 44/364 (12%), Positives = 107/364 (29%), Gaps = 33/364 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + + +N ++ A+K A + L ++S+ E+ Sbjct: 21 PVMVLDLEVVRDNYAAFARAL--PDTRVFYAVKANPAPEVLGLLASLGSCFDTASVVEIQ 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK---LHKKI 118 L + ++ + C + A+ + +++ K A+ + + Sbjct: 79 LALAAGATADRISFGNTIKKERCIVRALELGVRLFAVDCQAEVEKIARAAETAGVAPEDV 138 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176 + + + + + + G+ FH + + + Sbjct: 139 QVFCRILCDGAGAEWPLSRKFGCVPEMAVDVLEHAHRQGLRAYGVSFHVGSQQGNTEAWD 198 Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSV 227 L F + ++LGGG + L + + Sbjct: 199 GALAASAMIFRECAERGIALSMVNLGGGFPTKYLKEVPGVESYGNAIFRALTKHFGNHMP 258 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278 + +EPG +V N + V+ +S+ + + + + + Y Sbjct: 259 ETIIEPGRGMVGNAGIIEAEVVLVSKKSDAADEVRWVYLDIGKFGGLAETMDESIRYAIR 318 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334 ++ G +C + D+ E + + IGD++ E Y F Sbjct: 319 TDH-DEDRKVPCVLAGPTCDSADVLYEKTPYPLPVSLSIGDKVLIEGAGAYTTTYAAVAF 377 Query: 335 NGIN 338 NG Sbjct: 378 NGFP 381 >gi|326470122|gb|EGD94131.1| ornithine decarboxylase [Trichophyton tonsurans CBS 112818] gi|326484361|gb|EGE08371.1| ornithine decarboxylase [Trichophyton equinum CBS 127.97] Length = 460 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 58/389 (14%), Positives = 107/389 (27%), Gaps = 42/389 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + +G +S E+ Sbjct: 73 PFYVADLGEVYRQHIRWKTNLPR--VKPFYAVKCNPNPQVLRLMAVLGNGFDCASKAEID 130 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L Y K S + +K K ++ LRI Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKEMCPDAELYLRIL 190 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + NV G+ FH + F +++ Sbjct: 191 TDDSASLCRLSMKFGASLSSARPLLELAHGLGLNVVGVSFHVGSGAEDPKSFIKAVQDAR 250 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L + + +++ EPG V Sbjct: 251 FVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGDALDNYFPPH-IRVIAEPGRYYVAT 309 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATI-------------- 281 TL V+ + + DS ++ P + Sbjct: 310 AFTLAANVIARRDVGVEEPLSDSESDSTTPSRASTPSSSGAYMIYLNDGVYGNFSNIVFD 369 Query: 282 -------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYN 327 + P + G +C D+ E + +G+ + FE++ Y Sbjct: 370 HQHPVAQILTKDDDYASAPIEYSIWGPTCDGIDVISERITLNGLLGVGNWLYFENMGAYT 429 Query: 328 INRKNWFNGI--NMPTIAVKNVDGTIKAI 354 FNG I + G + Sbjct: 430 QCSATRFNGFTDKHEVIYIVTEPGAAALL 458 >gi|298293889|ref|YP_003695828.1| Orn/DAP/Arg decarboxylase 2 [Starkeya novella DSM 506] gi|296930400|gb|ADH91209.1| Orn/DAP/Arg decarboxylase 2 [Starkeya novella DSM 506] Length = 376 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 102/356 (28%), Gaps = 27/356 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N ++ A+K + L + +S+ E++ Sbjct: 17 PCVVVDLDVVRSNYAAFARAL--PDTRVFYAVKANPDPAILSALAELGSCFDCASVNEIL 74 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ + A + +++ K A + Sbjct: 75 MALAAGATPDRISFGNTIKKERDVARAFELGVRLFAVDCEAEVEKIARVAAGAKVFCRIL 134 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + P + G+ FH + K+ + + L + Sbjct: 135 CDGAGAEWPLSRKFGCVPEMA--VDVLEHAHRLGLEAYGVSFHVGSQQKNVEAWDSALAS 192 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 + F + ++LGGG + L Q +E Sbjct: 193 ASQIFRECMERGFSLSLVNLGGGFPAKYLQDVPAAEAYGEAIFRALSRHFGNAIPQTIIE 252 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYLLYQESATIYPNTGP 287 PG +V + V+ IS+ + + ++ + P+ G Sbjct: 253 PGRGMVGAAGLIEAEVVLISKKAADDDMRWVYLDIGKFGGLAETMEEAIRYPLVTPHDGD 312 Query: 288 --YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 ++ G +C + D+ E + IGD++ E Y FNG Sbjct: 313 AMEPCVLAGPTCDSADVMYEKTPVMLPVSLAIGDKVLIEATGAYTTTYSAVAFNGF 368 >gi|121602552|ref|YP_989352.1| pyridoxal-dependent decarboxylase [Bartonella bacilliformis KC583] gi|120614729|gb|ABM45330.1| pyridoxal-dependent decarboxylase [Bartonella bacilliformis KC583] Length = 377 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 112/357 (31%), Gaps = 29/357 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ A+K A + L ++S+ E+ Sbjct: 18 PCLVVDLDIVHENYLNFEKALPQS--RIFYAVKANPAPEILRLLVSLGSSFDAASVAEIK 75 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E E ++ K A + + ++ K A + Sbjct: 76 MILESGATAERISFGNTIKKERDIASAHALGVSLYAVDCIEEVEKVARAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 N + P + C+ +G+ FH + + L + Sbjct: 136 TNGEGAEWPLSRKFGCVPAMAVDVLCR--AHQLGLQAHGVSFHVGSQQTDLNAWDRALSD 193 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 + F Q++ I++GGG LK++ + +E Sbjct: 194 VAIVFERLEKEGIQLKLINMGGGFPTRYLHDVPTAQVCGVVIFDSLKKYFGNRIPETIIE 253 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284 PG A+V N + T V+ IS+ N I + + + + + Y T+ + Sbjct: 254 PGRAMVGNAGVIRTEVVLISKKADNDNIRWVYLDVGKFNGLAETMDEAIRYP-IETMRDD 312 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 ++ G +C + D+ E + + +GD + Y + FNG Sbjct: 313 KAMEPCILAGPTCDSADVMYEKSLYLLPLSLTVGDELLIHGTGAYTATYASVAFNGF 369 >gi|307946080|ref|ZP_07661415.1| lysine/ornithine decarboxylase [Roseibium sp. TrichSKD4] gi|307769744|gb|EFO28970.1| lysine/ornithine decarboxylase [Roseibium sp. TrichSKD4] Length = 376 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 50/365 (13%), Positives = 110/365 (30%), Gaps = 30/365 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + A+K A + L +S+ E+ Sbjct: 17 PCVVVDLDIVRDNYHAFARSL--PDTSVYYAVKANPAPEILSLLESLGSCFDCASVGEIE 74 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + +Y + A + V +++K A ++ R Sbjct: 75 MVLATGASADRISYGNTIKKEKDIAKAYAYGVRLFAVDCVEEVDKIARSA--PGSRVFCR 132 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + + + G+ FH + + + L Sbjct: 133 VLCDGIGAEWPLSRKFGCDADMAPDVLEYAHRLGLQAYGVSFHVGSQQANLEAWDLALAM 192 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTD----KDYPVKDFC--QRLKEFSEKYSVQIYLE 232 F ++ +++GGG P + L + +E Sbjct: 193 AAGVFKEMALRGIDLKMVNMGGGFPTRYLKDVPGVPTYGTAIFEALCKHFGNRLPSTIIE 252 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284 PG +V N + V+ IS + I S + + + + Y + Sbjct: 253 PGRGMVGNAGMIEAEVVLISRKSADDEIRWVYLDIGKFSGLAETMDEAIRYPIRTPKDGD 312 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NM 339 ++ G +C + D+ E + + IGD+I E Y FNG + Sbjct: 313 RTA-PCVLAGPTCDSVDVMYEKTPYELPVSLSIGDKILIEACGAYTTTYSTVSFNGFAPL 371 Query: 340 PTIAV 344 + + Sbjct: 372 ASHVI 376 >gi|169773617|ref|XP_001821277.1| ornithine decarboxylase [Aspergillus oryzae RIB40] gi|238491624|ref|XP_002377049.1| ornithine decarboxylase [Aspergillus flavus NRRL3357] gi|83769138|dbj|BAE59275.1| unnamed protein product [Aspergillus oryzae] gi|220697462|gb|EED53803.1| ornithine decarboxylase [Aspergillus flavus NRRL3357] Length = 449 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 111/355 (31%), Gaps = 26/355 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + V+ A+KC + + + +G +S E+ + Sbjct: 77 FYVADMGEVYR--QHLRWKMNLSRVRPFYAVKCNPDPEILRLMAKLGNGFDCASKAEIDM 134 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K + + +K KA ++ LRI Sbjct: 135 ALDTGIDPSRIIYAQPCKTKSYLRYAAQMGVKQMTFDNADELYKIKACFPDAELYLRILT 194 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + + + V G+ FH + F +++ Sbjct: 195 DDSTSLCRLSMKFGASLDIARQLLELAHELELKVVGVSFHVGSGAEDPTAFVKAVQDARM 254 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F ++ + +GGG + + L + + +++ EPG V Sbjct: 255 VFDQAAEIGHELHTLDVGGGFSGDTFEKFAGVLSEALDTYFPPH-IRVIAEPGRYYVATA 313 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288 TL V+ + + + ++ D + S I+ + P Sbjct: 314 FTLAANVIARRDVRDPEDPANDAYMIYLNDGVYGNFSNIIFDHQHPVAQILTCANASNAA 373 Query: 289 -----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C D+ + + +GD + FE++ Y FNG Sbjct: 374 TSAGIAYSIWGPTCDGIDVISQRITLPGLLDVGDWLFFEEMGAYTKCSATRFNGF 428 >gi|159185643|ref|NP_357406.2| ornithine decarboxylase [Agrobacterium tumefaciens str. C58] gi|159140777|gb|AAK90191.2| ornithine decarboxylase [Agrobacterium tumefaciens str. C58] Length = 377 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 48/367 (13%), Positives = 112/367 (30%), Gaps = 38/367 (10%) Query: 2 IKT-----PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 IKT P ++D + +N + + + A+K A + L Sbjct: 10 IKTRRPEGPCLVVDLDVVRDNFNAFRHSL--PNSAIYYAVKANPAPEILKLLASLGSNFD 67 Query: 57 SSSLYEVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 +S+ E+ + + ++ + A D ++ ++ K A Sbjct: 68 CASVAEIQMALDAGATSDRISFGNTIKKERDVARAHALGIDLFAVDSHEEVEKVARAAPG 127 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKS 171 + + + P + + + + G+ FH + + Sbjct: 128 ARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQMGLESYGVSFHVGSQMMN 183 Query: 172 FLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFS 222 + A L + ++ F ++ +++GGG + + L++ Sbjct: 184 LDAWDAALADAKRVFASLAKQGIHLQMVNMGGGFPTKYLRDVPAAEEYGQAIDTALRKHF 243 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLL 274 + +EPG +V N + V+ +S+ N + + + + Sbjct: 244 GNQIPKTIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMDEAIR 303 Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRK 331 Y + ++ G +C + D+ E + + IGD + E Y Sbjct: 304 YPIRTERDQDEM-QPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGTGAYTTTYS 362 Query: 332 NW-FNGI 337 FNG Sbjct: 363 AVAFNGF 369 >gi|156847349|ref|XP_001646559.1| hypothetical protein Kpol_1055p58 [Vanderwaltozyma polyspora DSM 70294] gi|156117237|gb|EDO18701.1| hypothetical protein Kpol_1055p58 [Vanderwaltozyma polyspora DSM 70294] Length = 455 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 110/364 (30%), Gaps = 34/364 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D +L + V+ A+KC + TL+Q +S E+ Sbjct: 78 FFVCDLGELEKLYKNWK--LELPNVQPFYAVKCNPNEKILQTLDQLGINFDCASKSEIDK 135 Query: 66 GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K + + + K K + ++ +RI Sbjct: 136 VLSMNVDPERIIYANPCKASSFIRYAQTKNVLKSTFDNVEELHKIKKFHPNSELFIRIAT 195 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S ++ L+ E ++ N+ G+ FH F +K+ Sbjct: 196 DDSTAQCRLSTKYGCELSDVENLLQAVKDLDLNLVGVAFHVGSGASDFTSLYQAVKDSRY 255 Query: 185 EFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F + +++ + +GGG F K L+E+ V+ EPG V+ Sbjct: 256 VFDKCIEMGLPELKILDIGGGFQFESFHESSKVVRVALEEYFPGDKVKFMAEPGRYFVST 315 Query: 241 TTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN------ 284 TL + V+ + N ++ + H + Sbjct: 316 ALTLASNVIAKRTISNNEAMLYINDGVYGNMNCILFDHQEPIPRILYHNNEFHYYDFESS 375 Query: 285 ----------TGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINRKNW 333 P + G +C D + ++ +++GD F ++ Y Sbjct: 376 TNMLKKNDVSKYPQKVSIWGPTCDGLDCITKEYYLKHDLEVGDWFYFPNLGAYTSTAATP 435 Query: 334 FNGI 337 FNG Sbjct: 436 FNGF 439 >gi|302186112|ref|ZP_07262785.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae 642] Length = 402 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 57/385 (14%), Positives = 121/385 (31%), Gaps = 35/385 (9%) Query: 2 IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 ++T P ++ D L ++ + AGV+L A+K + M +TL + G S Sbjct: 18 LETDPLAAFIYDLDALRQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76 Query: 59 SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 S E+ + + ++ D ++ + L N I +++++ + + A++ + Sbjct: 77 SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGR 136 Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + L E + + + G H Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEAELAEAVRRVDNASHLTLKGFHVHAMS 196 Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218 S +L + + + Q+ ++GGGI + + + C+ L Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALARDPGQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256 Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275 ++ + L EPG I VLD + ++ Sbjct: 257 EKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLICRGGTHQFRLPVAQS 316 Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + I+ P + G+ C D+ K V IGD + Y Sbjct: 317 HDHPVIHLPNTPQNAASSEQAYTIVGQLCTPKDVLSRRQPLKDVNIGDLLVLPLAGAYGY 376 Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352 N + F P+ ++ Sbjct: 377 NISHADFLCHPRPSQHFVRNGERVR 401 >gi|222149795|ref|YP_002550752.1| ornithine decarboxylase [Agrobacterium vitis S4] gi|221736777|gb|ACM37740.1| ornithine decarboxylase [Agrobacterium vitis S4] Length = 377 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 46/359 (12%), Positives = 106/359 (29%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ + A+K + L +S+ E+ Sbjct: 18 PCLVVDLDVVRDNYGAFRHALPDSA--IYYAVKANPEPAILSLLASLGSNFDCASVAEIE 75 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ + A + ++ ++ K A + Sbjct: 76 MALAAGATAQRISFGNTIKKERDIAKAHALGINLFAVDSHEEVEKIARAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + P + + + + G+ FH + + A L Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQHGLESFGVSFHVGSQMTKVDAWDAAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + ++ F ++ +++GGG LK+ Q Sbjct: 192 GDAKRVFAQLAKQGIYLQMVNMGGGFPTKYLRDIPSAEAYGQAINASLKKHFGNNIPQTI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + V+ IS+ N + + + + Y Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDAHRWVFLDIGKFGGLAETMDEAIRYPIRTAHD 311 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD + E Y FNG Sbjct: 312 GDEM-EPCVLAGPTCDSADVMYEKNMYPLPLSLTIGDDVLIEGTGAYTTTYSAVAFNGF 369 >gi|6435612|pdb|7ODC|A Chain A, Crystal Structure Ornithine Decarboxylase From Mouse, Truncated 37 Residues From The C-Terminus, To 1.6 Angstrom Resolution Length = 424 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 62/373 (16%), Positives = 114/373 (30%), Gaps = 33/373 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + S++ K K+ LRI Sbjct: 98 VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPDTFVQAVSDARC 217 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ V S + D+ + Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P+ Y++ + G +C D E + +GD + FE++ Y + + F Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNV 347 NG P I Sbjct: 398 NGFQRPNIYYVMS 410 >gi|62858211|ref|NP_001015993.1| arginine decarboxylase [Xenopus (Silurana) tropicalis] gi|89271304|emb|CAJ82977.1| ornithine decarboxylase-2 [Xenopus (Silurana) tropicalis] Length = 458 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 57/368 (15%), Positives = 117/368 (31%), Gaps = 33/368 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ VK A+KC ++ G+ L + G +S E+ L Sbjct: 39 FFVADLGDVVK--KHLRFLKALPRVKPFYAVKCNSSRGVVKILAELGAGFDCASKTEIEL 96 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E Y K + + +++ K + ++ LRI Sbjct: 97 VQDIGVTPERIIYANPCKQISQIKFAAKTGVQMMTFDNEVELSKVSRNHPNARMVLRIAT 156 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + + + ++ +V G+ FH ++ + + Sbjct: 157 DDSKSSARLSVKFGAPLKSCRRLLEMAKNLSVDVIGVSFHVGSGCTDSKAYTQAIADARL 216 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ------IYLEPGE 235 F F + + +GGG T+ + + + I EPG Sbjct: 217 VFEMASEFGYNMWLLDIGGGFPGTEDSKIRFEEMAGVINPALDLYFPEGSDVQIIAEPGR 276 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---------------QESAT 280 V + +L ++ E + D + + Y Sbjct: 277 YYVASAFSLAVNIIAKKEVLMEHSGSDDEENGPNKNIMYYVNDGVYGSFNCLVFDHAHPK 336 Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + P YT+ + G +C D E +GD + FE++ Y I + F Sbjct: 337 PILHKKPSPDQPLYTSSLWGPTCDGLDQIAENLLLPEHHVGDWLLFENMGAYTIAASSNF 396 Query: 335 NGINMPTI 342 NG + Sbjct: 397 NGFQQSPV 404 >gi|118379|sp|P00860|DCOR_MOUSE RecName: Full=Ornithine decarboxylase; Short=ODC gi|53518|emb|CAA30301.1| ornithine decarboxylase [Mus musculus] gi|200120|gb|AAA39845.1| ornithine decarboxylase [Mus musculus] gi|387500|gb|AAA51638.1| ornithine decarboxylase [Mus musculus] gi|387501|gb|AAA39849.1| ornithine decarboxylase [Mus musculus] gi|404562|gb|AAB27809.1| ornithine decarboxylase [Mus musculus domesticus] Length = 461 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 62/373 (16%), Positives = 114/373 (30%), Gaps = 33/373 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + S++ K K+ LRI Sbjct: 98 VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPDTFVQAVSDARC 217 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ V S + D+ + Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P+ Y++ + G +C D E + +GD + FE++ Y + + F Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNV 347 NG P I Sbjct: 398 NGFQRPNIYYVMS 410 >gi|300741295|ref|ZP_07071316.1| diaminopimelate decarboxylase [Rothia dentocariosa M567] gi|300380480|gb|EFJ77042.1| diaminopimelate decarboxylase [Rothia dentocariosa M567] Length = 498 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 53/446 (11%), Positives = 112/446 (25%), Gaps = 84/446 (18%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDGTT 56 TP Y+ + ++A + + A K F + + Sbjct: 48 DTPQYVFSEDTFRARARGYRQAFEDAFARHGAQVSVYYAGKSFLCTSVARWAYEEGLCLD 107 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA-- 111 ++S E+ + + G+ A + K A+ ++ ++V +L D Sbjct: 108 TASGGELAIALRAQVPGQNIALHGNNKSRGEIARAIKHGVGRVVADSVDELKLIADVHAE 167 Query: 112 -----------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGE------------KCK 148 + +RI P V S + G + Sbjct: 168 LNTERAAAGQEPYPAVPVLIRITPGVHASTHESIATAHEDQKFGMSLQPGTARLAGLEAD 227 Query: 149 DKIESEIK-------------------NVNGLMFHNNCENKSFLCFSAMLK----NIEKE 185 + + G+ H + F + Sbjct: 228 ELEYWSTTEDESYAMLAAGILTATDSLDFRGIHCHIGSQIFEAQGFEQAADTALTFMHAV 287 Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-----------KEFSEKYSVQIYLEPG 234 + + + LGGG + +++ + EPG Sbjct: 288 NQKYGISLPELDLGGGYGIGYTEADTPRSIEQITVSIADAVAATCGRLGMTIPHMSFEPG 347 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDS----------SVEAHVPDYLLYQESATIYPN 284 +I + TV I + + L + N Sbjct: 348 RSISGPSGVTLYTVGTIKNVSIEDEHGQIRVRRYVSVDGGMSDNARPVLYDADYMVTLAN 407 Query: 285 TGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINM 339 P + V G+ C +GDI + + + GD ++ Y + +N ++ Sbjct: 408 RAPAGEQVLSRVVGKHCESGDIVVRYCYLPADLCAGDILAVPATGAYCYVLGSNYNYLSR 467 Query: 340 PTIAVKNVDGTIK-AIREFSYNDYYN 364 P + + IR S ++ Sbjct: 468 PPVIATSAGEAAHPIIRRQSEDEMLA 493 >gi|291532659|emb|CBL05772.1| diaminopimelate decarboxylase [Megamonas hypermegale ART12/1] Length = 354 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 102/347 (29%), Gaps = 30/347 (8%) Query: 48 LNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLN 105 + + G SSL E++L GE E + I + ++ + Sbjct: 1 MQEEGAGADCSSLPELLLADASGIHGEKIMLTSNDTPADEFQKAIELGAIINLDDITHIE 60 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------ 159 + A + + ++ G + +E+ ++ Sbjct: 61 YLEKNAGMPQVMS--FRYNPGNLIEGNDIIGKPEEAKYGLTKEQMLEAYKIAMDKGVKRF 118 Query: 160 GLMFHNNCENKSFL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 GL + + + E+I+LGGGI + Sbjct: 119 GLHTMVISNETRLEGLLLNAKIVFDLAAEIATKLGIKFEFINLGGGIGIPYRPEDNAVDL 178 Query: 216 QRLKEFSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS 264 + L E K +I E G AI L +TVL +N + +DS Sbjct: 179 EALGEGVHKLYDEILVPAGLTTTAIAYESGRAITGPYGYLVSTVLHQKNTYRNYIGLDSC 238 Query: 265 VEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + + L + V G C D F + IGDRI Sbjct: 239 MANLMRPALYGSYHHIVVVGKENEPCDHVYDVTGSLCENNDKFAIDRKLPKIDIGDRIIM 298 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 D + +NG + + DG+++ IR + DY+ L Sbjct: 299 FDTGAHGHAMGFNYNGKLRSAELLLHEDGSVELIRRAETIEDYFATL 345 >gi|227823450|ref|YP_002827423.1| ornithine decarboxylase SpeF [Sinorhizobium fredii NGR234] gi|227342452|gb|ACP26670.1| ornithine decarboxylase SpeF [Sinorhizobium fredii NGR234] Length = 377 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 109/359 (30%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ + A+K A + L +S+ E+ Sbjct: 18 PCLVVDLDIVRDNFKAFRHALPDSA--IYYAVKANPAPEILRLLAGLGSNFDCASVAEIE 75 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E +Y + A + ++ ++ K A + Sbjct: 76 MALEAGATPSRISYGNTIKKERDIARAHALGINLFAVDSHEEVEKVARAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + P + + + + G+ FH + + A L Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLVSYGVSFHVGSQMTKLDAWDAAL 191 Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + ++ FG +++ +++GGG LK+ + Sbjct: 192 ADAKRVFGQLDKQGIELKMVNMGGGFPTKYLRDVPSAEAYGQAIFGALKKHFGNNIPETI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + V+ +S+ N + + + + Y Sbjct: 252 IEPGRGMVGNAGVIKAEVVLVSKKSDNDSHRWVFLDIGKFGGLAETMDEAIRYPIRTARD 311 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD + E Y FNG Sbjct: 312 ADEM-EPCVLAGPTCDSADVLYEKNMYPLPISLTIGDEVLIEGTGAYTTTYSAVAFNGF 369 >gi|158300908|ref|XP_320710.4| AGAP011805-PA [Anopheles gambiae str. PEST] gi|157013386|gb|EAA00421.4| AGAP011805-PA [Anopheles gambiae str. PEST] Length = 400 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 65/367 (17%), Positives = 116/367 (31%), Gaps = 26/367 (7%) Query: 2 IKT--PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + T P+Y++D ++ + K V A+KC + TL +S Sbjct: 31 LPTDNPFYVMDIGDIVRKHQQWIE--KMPRVVPHYAVKCNDTDLVCATLAALGASFDCAS 88 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ E + K A + T+ +++ ++L+K K Sbjct: 89 KGEIAKILSLGVAPERIIFANPMKPASHVRYAASNAVKTMTYDSDTELHKIKQYCPDAKL 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175 I +R + P K S V G+ FH F + Sbjct: 149 VIRIRCEAEKAQCPLGKKFGCDPVEEAPRLIK-IARSLGLEVIGVSFHVGSGCADFPIYY 207 Query: 176 --SAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIY 230 + +++ + +GGG D L F +V++ Sbjct: 208 KAISYARDLFDYAAQLGYSFSLLDIGGGFPGDTGTSIDEVAMIVNAALDTFFPDKAVRVI 267 Query: 231 LEPGEAIVTNTTTLNTTVLDIS------------ENIKNLVIVDSSVEAHVPDYLLYQES 278 EPG V++ TL T V V +S + + D+ + Q Sbjct: 268 SEPGRYYVSSAFTLVTNVQSKRVCLNARTGTIDRMMYYLNDGVYASFNSILYDHQVPQPK 327 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 Y + + G +C A D E ++I D + FE++ Y I + FNG Sbjct: 328 LIGGQAGKQYKSTLWGPTCDALDQLIETIALPELQIDDWVVFENMGAYTIPVASPFNGFE 387 Query: 339 MPTIAVK 345 +P + Sbjct: 388 LPKVYCY 394 >gi|131888589|ref|NP_038642.2| ornithine decarboxylase [Mus musculus] gi|37590522|gb|AAH59826.1| Odc1 protein [Mus musculus] gi|52789415|gb|AAH83122.1| Odc1 protein [Mus musculus] gi|74137839|dbj|BAE24082.1| unnamed protein product [Mus musculus] gi|148666078|gb|EDK98494.1| mCG130699 [Mus musculus] gi|189176133|gb|ACD81645.1| ornithine decarboxylase structural 1 [Mus musculus] Length = 461 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 62/373 (16%), Positives = 114/373 (30%), Gaps = 33/373 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + S++ K K+ LRI Sbjct: 98 VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ V S + D+ + Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P+ Y++ + G +C D E + +GD + FE++ Y + + F Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNV 347 NG P I Sbjct: 398 NGFQRPNIYYVMS 410 >gi|157117140|ref|XP_001652954.1| ornithine decarboxylase [Aedes aegypti] gi|108876155|gb|EAT40380.1| ornithine decarboxylase [Aedes aegypti] Length = 432 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 66/376 (17%), Positives = 129/376 (34%), Gaps = 35/376 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++++D ++ ++R+ V+ A+KC + +TL G +S E+ Sbjct: 37 PFHVLDLDDVVQ--KHLTWLRQMPRVRPFYAVKCNDDPYILETLACLGTGFDCASKAEIR 94 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K E + F++ +L K + L Sbjct: 95 KVLNLGVEPDRIIFAHPVKSNEALLFAKEKRVTKMTFDSELELEKIAQFYPEAE----LV 150 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK---NVNGLMFHNNCENKSFLCFSAM 178 + + +++ + E+ + I K NV G+ FH C +K C+ Sbjct: 151 LRFRHDSATVLISLGKKFGCNAQEEGPELIRKAKKLGLNVVGVSFHVGCGSKDVDCYYDA 210 Query: 179 LKNIEKEFG---HFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYSVQIYL 231 +K+ + F + + + +GGG Y K F + +++ Sbjct: 211 IKSAKSLFDFASSVGYKFKLLDIGGGFPGDSDKKIDGYAEVINQALDKFFPTQSGIEVIA 270 Query: 232 EPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEAHVPDYLLYQE-------S 278 EPG V + L TT+ + ++ V + D++ + Sbjct: 271 EPGRYYVGSAVRLFTTIHGKKFVKTDDGENHVMYYINDGVFGTLFDWVSLRAVQDLARVI 330 Query: 279 ATIYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 +I + + G +C + DI E IG+ + FE++ Y I FN Sbjct: 331 PSITSDKHDKPLLKTTIWGPTCDSTDIVCEDVEFPEHDIGEYMLFENIGAYGITFATSFN 390 Query: 336 GINMPTIAVKNVDGTI 351 G PTI V + T Sbjct: 391 GFPSPTIRVYVKEQTW 406 >gi|261205964|ref|XP_002627719.1| ornithine decarboxylase [Ajellomyces dermatitidis SLH14081] gi|239592778|gb|EEQ75359.1| ornithine decarboxylase [Ajellomyces dermatitidis SLH14081] gi|239611062|gb|EEQ88049.1| ornithine decarboxylase [Ajellomyces dermatitidis ER-3] gi|327350693|gb|EGE79550.1| ornithine decarboxylase [Ajellomyces dermatitidis ATCC 18188] Length = 450 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 110/358 (30%), Gaps = 28/358 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + + +G +S E+ Sbjct: 71 PFYVADLGQVYRQHIRWKKNLGR--VKPFYAVKCNPDPQVLRLMAKLGNGFDCASKAEID 128 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L Y K S + +K K ++ LRI Sbjct: 129 LALGVGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPDAELYLRIL 188 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + + NV G+ FH + F +++ Sbjct: 189 TDDSASLCRLSMKFGASLSIARSLLELAKELKLNVVGVSFHVGSGAEDPRSFVKAVEDSR 248 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L E + +++ EPG V + Sbjct: 249 YVFDQAAEAGFDLKVLDVGGGFSEDTFERFAATLSDALDEHFPPH-IRVIAEPGRYYVAS 307 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAH------VPDYLLYQESATIYPNTGPYT----- 289 TL V+ + + S+ A + D + S I+ + P Sbjct: 308 AFTLAANVIARRDVSLEMSDSASTDSATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 367 Query: 290 ---------AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C D+ E + +G+ + FE++ Y FNG Sbjct: 368 GSPVCTPIEYSIWGPTCDGIDLITERTTLPGALDVGNWLYFENMGAYTKCSATRFNGF 425 >gi|158300906|ref|XP_320709.4| AGAP011806-PA [Anopheles gambiae str. PEST] gi|157013385|gb|EAA00695.5| AGAP011806-PA [Anopheles gambiae str. PEST] Length = 404 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 55/374 (14%), Positives = 108/374 (28%), Gaps = 33/374 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +++D ++ + + VK A+KC + TL G +S E+ Sbjct: 37 PLHVLDLDDVVR--KHYGWCAQMPRVKPYYAVKCNDDPRILQTLMTLGTGFDCASKGEME 94 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+ + K A + F+ +L K + L Sbjct: 95 RMLGYGVKPESIIFAQPAKSIPSLLYARSKQVSVMTFDGAVELEKIHQYYPEA----RLV 150 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIES---EIKNVNGLMFHNNCENKSFLCFSAM 178 + K + + + + + NV G+ FH + + Sbjct: 151 LRMRHDSLKVRCSLGKKFGCDPIAEAPELLRYAATLRMNVIGISFHVGSDCDEHEVYYEA 210 Query: 179 LKNIEKEFGH---FITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEKYSVQIYL 231 +K + F + + + +GGG + Y + F + ++I Sbjct: 211 VKIAKGLFEYAKTIGYEFSLLDIGGGFPGDNDKPIDRYAQAVNVAIDQFFPAESDIRIIA 270 Query: 232 EPGEAIVTNTTTLNTTV--------------LDISENIKNLVIVDSSVEAHVPDYLLYQE 277 EPG V++ TL + V + + + Sbjct: 271 EPGRYYVSSAVTLVSFVDSKRVMKEKQPDGTEKTRMYYYLNDGIFGTFYCTAHEAQPAIP 330 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G +C D+ + +GD + FE+ Y FNG Sbjct: 331 IVERKTGAKDFPTSVWGPTCDVMDLILPDVMLPELNVGDSVVFENCGAYGQVLACRFNGF 390 Query: 338 NMPTIAVKNVDGTI 351 +P + +GT Sbjct: 391 PLPKVIAYLREGTW 404 >gi|254230297|ref|ZP_04923686.1| carboxynorspermidine decarboxylase [Vibrio sp. Ex25] gi|151937194|gb|EDN56063.1| carboxynorspermidine decarboxylase [Vibrio sp. Ex25] Length = 295 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 123/290 (42%), Positives = 179/290 (61%), Gaps = 3/290 (1%) Query: 80 AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139 Y + ++ V CD +IFN+ SQL ++ + IGLR+NP VSY+ LA+P R Sbjct: 2 GYSEDDVRDVADICDKMIFNSQSQLAAYRHIVEGKAS-IGLRLNPGVSYAGQDLANPARQ 60 Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLG 199 FSRLG + ++G+MFH NCENK F +L I ++FG ++ +++W+S+G Sbjct: 61 FSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDAISEQFGEYLDKLDWVSMG 120 Query: 200 GGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259 GG+ FT Y ++ LK FSEK+ VQ+YLEPGEAI+T TT L TV+DI EN+K Sbjct: 121 GGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTA 180 Query: 260 IVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 IVDS+ EAH D L+Y E A+I G + ++ SCLAGD F +FE+P++IG R Sbjct: 181 IVDSATEAHRLDTLIYNEPASILEASENGEHEYVIGSCSCLAGDQFCVANFEQPLEIGQR 240 Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + D AGY + + NWFNG+ MP++ + +G I+ + EF Y+D+ +LS Sbjct: 241 LHILDSAGYTMVKLNWFNGLRMPSVYCERSNGDIQKLNEFDYSDFKRSLS 290 >gi|293394650|ref|ZP_06638942.1| diaminopimelate decarboxylase [Serratia odorifera DSM 4582] gi|291422776|gb|EFE96013.1| diaminopimelate decarboxylase [Serratia odorifera DSM 4582] Length = 354 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 105/353 (29%), Gaps = 39/353 (11%) Query: 48 LNQYMDGTTSSSLYEVMLGHEKF---GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQ 103 + Q S SL EV + GG+ + D A +S + ++ Sbjct: 1 MRQQGVKVDSVSLGEVERALQAGYQPGGDEIVFTADVLDHATLARVSELKIPVNAGSIDM 60 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKN 157 L + + LRINP + + S+ G D I+ Sbjct: 61 LEQLGQ--CSAGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPKAVEKIQRYGLT 118 Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 + G+ H + + + ++ I IS GGG+ + + Sbjct: 119 LLGVHMHIGSGVD-YQHLERVCDAMVQQVIDLGQDIAAISAGGGLSIPYQHGEEAIDTEH 177 Query: 218 LKEFSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVE 266 ++ + V + +EPG ++ L V + ++ V+VD+ Sbjct: 178 YFGLWDRARQRIAAHLGHPVALEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLVDAGFN 237 Query: 267 AHVPDYLLYQESATIYPNTGPYTA--------MVCGRSCLAGDIF-------GEFHFEKP 311 + + ++ G C +GD+F E Sbjct: 238 DLMRPAMYGSYHHISLLPADGRDTAGQPLRDTVIAGPLCESGDVFTQQAGGGVETRALPA 297 Query: 312 VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 V++GD + F D Y + + +N + + R + ++ Sbjct: 298 VQVGDYLVFHDTGAYGSSMSSNYNSRPLLPEVLFENGEARLIRRRQTIDELIA 350 >gi|329945379|ref|ZP_08293142.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 170 str. F0386] gi|328529001|gb|EGF55932.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 170 str. F0386] Length = 486 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 57/430 (13%), Positives = 122/430 (28%), Gaps = 68/430 (15%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG 54 +P +++D+ L + G + A K F + + Q G Sbjct: 54 PSPVFVLDEADLRGRAASWSAAMAEEFWSGYGLRGGEAFYAGKAFLTTQVARIVLQEGMG 113 Query: 55 TTSSSLYEVMLGHEKF----GGETHAY--------NVAYKDCEIDAVLSNCDTIIFNTVS 102 ++S E+ +G G E + N AV ++ ++ Sbjct: 114 IDTASRVELAVGLTGLEKVDGPEATTHARRLGLHGNGKTPAEVTTAVRHRVGHLVIDSPE 173 Query: 103 QLNKFKDKAQKLHK----------KIGLRINPSVSYSKFILADPNRPFSRLGE------- 145 +++ +L + ++ +R+ + + G Sbjct: 174 EVDHAVAAVHELRRSGDFGADERARVMVRLTTGIHAGGHEYISTAHEDQKFGLSVSTGAA 233 Query: 146 --KCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLG 199 + ++ + GL H + F +L + + LG Sbjct: 234 RRTIDAIVAADELELAGLHSHIGSQILDMAGFREAVGVVLGLRHEIAVDTGHLCPEVDLG 293 Query: 200 GGIHFTDKDYPVKDF---------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTT 247 GG + ++E E+ + +EPG A+ TT T Sbjct: 294 GGYGIAYTGADPVAPSPAQVARTLAEAVRETCERLGDEVPTVSIEPGRAVAGPTTVTLYT 353 Query: 248 VLDISENI------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------AMVCGR 295 V + + V +D + ++ L + N P A V G+ Sbjct: 354 VTGLKRVELGEGASRLYVSIDGGMSDNIRPALYEAAYTALVANRRPDPSAGLTRARVVGK 413 Query: 296 SCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 C +GD+ + +GD ++ Y + + +N P + + + Sbjct: 414 HCESGDVVVRDVDLPADLAVGDVLAVPATGAYGRSMASSYNLFTRPGVRWVREGESGWIL 473 Query: 355 REFSYNDYYN 364 R + D Sbjct: 474 RPETIEDLLR 483 >gi|75277325|sp|O22616|DCOR_SOLLC RecName: Full=Ornithine decarboxylase; Short=ODC; AltName: Full=LeODC gi|3668354|gb|AAC61845.1| ornithine decarboxylase [Solanum lycopersicum] gi|10937976|gb|AAB82301.2| ornithine decarboxylase [Solanum lycopersicum] Length = 431 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 110/362 (30%), Gaps = 26/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ ++ ++ A+KC L+ +S E+ Sbjct: 64 PFYVLDLGEVVSLMEQWNSAL--PNIRPFYAVKCNPEPSFLSMLSAMGSNFDCASRAEIE 121 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K A + +++ ++ K + K + ++ Sbjct: 122 YVLSHGISPDRIVFANPCKPESDIIFAEKIGVNLTTYDSEDEVYKIRKHHPKCELLLRIK 181 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177 + + + + ++ V+G+ FH N +A Sbjct: 182 PMTDGNARCPMGPKYGALPEEIEPLLRTA-QAARLTVSGVSFHIGSGDADSNAYLGAIAA 240 Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + E + ++ + +GGG F + + I EPG Sbjct: 241 AKQVFETAAQLGMPKMTVLDIGGGFTSGHQFTTAAPAVKSALETHFHDFPELTIIAEPGR 300 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPD---------YLLYQESATI 281 TL TT++ + S+ + D + + Sbjct: 301 FFAETAFTLATTIIGKRVRGELKEYWINDGLYGSMNCVLYDHATVTATPLACMSNRNNLN 360 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + + V G +C A D + +++ D + F ++ Y + FNG N Sbjct: 361 CGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTSA 420 Query: 342 IA 343 I Sbjct: 421 IV 422 >gi|209550966|ref|YP_002282883.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536722|gb|ACI56657.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 377 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ + A+K A + L +S+ E+ Sbjct: 18 PCLVVDLDVISDNFHAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E ++ + A ++ ++ K A + Sbjct: 76 MALEAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179 + + P + + + + G+ FH + + + L Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLLSYGVSFHVGSQMTKVDAWDSAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + ++ F ++ +++GGG Q L+ Q Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFGNQIPQTI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + V+ IS+ N + + + + Y Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTEHD 311 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD + E Y FNG Sbjct: 312 GDEM-EPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAVAFNGF 369 >gi|119485611|ref|ZP_01619886.1| Orn/DAP/Arg decarboxylase 2 [Lyngbya sp. PCC 8106] gi|119456936|gb|EAW38063.1| Orn/DAP/Arg decarboxylase 2 [Lyngbya sp. PCC 8106] Length = 423 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 70/407 (17%), Positives = 122/407 (29%), Gaps = 52/407 (12%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 + K+ +L LK + + L Q G SS E+ + Sbjct: 2 YNLNKISRQYSKLRDYLP-PNFNILYTLKANSNLTICHRLAQLGCGADISSTGELKAALK 60 Query: 69 -KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125 F + K A+ + I+ ++++ + + AQK KK + I + Sbjct: 61 TGFSAPQIVFTGPGKTNSELAAAIEAGIGIIVLESINEARRLNNLAQKYGKKQDVLIRIN 120 Query: 126 VSYSKFILADPNRP-------------------------------FSRLGEKCKDKIESE 154 Y + ++ E+ E Sbjct: 121 PLYRTNQSCEIREKASSCGANDTNSVQPSLTIQTIASSSSKFGVDENKAIEEIAAINSLE 180 Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----K 207 N+ G+ + A N + I + GGGI Sbjct: 181 NLNLKGIHIFTESNVLDYQQLLASWTNTISIANKINDQGYHISLLDFGGGIGIPYNTVDP 240 Query: 208 DYPVKDFCQRLKEFSE--KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265 ++ ++ F + L+ E YS +E G +V T V+DI E++ I+ Sbjct: 241 EFDMESFGKELQRIFENNPYSYHCIVEIGRYLVGEAGCYITEVVDIKESLGQKFIILDGG 300 Query: 266 EA--HVPDYLLYQESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISF 320 + + G YT A + G+ DI E ++IGDR+ Sbjct: 301 VHQLLRLSMKPASKYMEVLGKNGNYTQKATLGGKLPTPLDIMVEDVMVPEDIEIGDRLVI 360 Query: 321 EDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAIREFS-YNDYYNN 365 + Y N F N P DG ++ IRE D++ N Sbjct: 361 YNCGAYGFNHSLTNFALHNYPAEVAY-SDGEMELIREPGKIEDFFLN 406 >gi|239944440|ref|ZP_04696377.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 15998] gi|239990897|ref|ZP_04711561.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 11379] gi|291447906|ref|ZP_06587296.1| orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 15998] gi|291350853|gb|EFE77757.1| orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 15998] Length = 434 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 54/402 (13%), Positives = 109/402 (27%), Gaps = 40/402 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + L + + +++ +LK +F L + SSL E Sbjct: 16 GTPLYVYDGEVLTDTVTELRSALH-PALEVFYSLKSNPNISVFRVLRRGGARAEVSSLVE 74 Query: 63 VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119 + + E+ A L ++ + +L+ + A + Sbjct: 75 LRTALAAGAKPEDVIFLGPGKSAEELGACLDVGVYAVVVESFDELDHLERLAGDRGVRQR 134 Query: 120 LRINPSV-SYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENKS 171 + + + + G K +++ +V G+ + Sbjct: 135 VLLRINPACAISGSRLTMGGKPRQFGIDEKAVLDAGDLPSRYRHADVAGIHVYMGTRILD 194 Query: 172 FL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 + L E+ +++ + +GGG+ D + D + L E Sbjct: 195 AEVLGKNTAYALDLAERVVRSTGIRLDAVDIGGGMGVAYFDGESDLDLADVVKELNPRIE 254 Query: 224 KYS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH---------- 268 K++ ++ LE G + T V + E++ V H Sbjct: 255 KFATAHPGTRLILESGRFLSARAGTYVLGVRYVKESLGESFAVADGGTHHHMAAVGIGSF 314 Query: 269 ----VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 P LL ++ V G C D + ++ GD I Sbjct: 315 VKRNFPAVLLGRDGEERTRTGPISPQNVTGPLCTPNDTLLKQAQLPDLRPGDLIGVARSG 374 Query: 325 GYNINRKNW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y F P + +D Sbjct: 375 AYGPTASPGLFLSHGYPAEVLVTEGRAHLVRSRDEPDDLMRK 416 >gi|319404654|emb|CBI78256.1| lysine/ornithine decarboxylase [Bartonella rochalimae ATCC BAA-1498] gi|319404673|emb|CBI78275.1| lysine/ornithine decarboxylase [Bartonella rochalimae ATCC BAA-1498] Length = 377 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 109/359 (30%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ A+K A + L ++S+ E+ Sbjct: 18 PCLVVDLDVVHENYLNFEKALPQS--RIFYAIKANPAPEILRLLVSLGSFFDAASVAEIE 75 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ K A + ++ K A + Sbjct: 76 MALAAGATANRISFGNTIKKERDIARAHALGISLYAIDCFEEVEKVARAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179 + + P + + + +G+ FH + + L Sbjct: 136 TDGEGAEWPLSQKFGCVPSMAVDV----LRYAHHLGLQAHGVSFHVGSQQTDLNAWDRAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIY 230 + F Q++ +++GGG LK++ + Sbjct: 192 SDTAFVFKSLEQEGIQLQLVNMGGGFPTRYLKDIPTVQTYGMSIFDALKKYFGNRIPETI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG A+V N + T V+ IS+ KN + + + + + + Y T + Sbjct: 252 IEPGRAMVGNAGVIRTEVVLISKKGKNDNVRWVYLDIGKFNGLTETMDEAIRYP-IETAH 310 Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + DI E + + IGD + Y + FNG Sbjct: 311 DDQAMEPCILAGPTCDSADIMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASVAFNGF 369 >gi|23273123|gb|AAH33264.1| Odc1 protein [Mus musculus] Length = 456 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 62/373 (16%), Positives = 114/373 (30%), Gaps = 33/373 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + S++ K K+ LRI Sbjct: 98 VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ V S + D+ + Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P+ Y++ + G +C D E + +GD + FE++ Y + + F Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNV 347 NG P I Sbjct: 398 NGFQRPNIYYVMS 410 >gi|6573548|pdb|2TOD|A Chain A, Ornithine Decarboxylase From Trypanosoma Brucei K69a Mutant In Complex With Alpha-Difluoromethylornithine gi|6573549|pdb|2TOD|B Chain B, Ornithine Decarboxylase From Trypanosoma Brucei K69a Mutant In Complex With Alpha-Difluoromethylornithine gi|6573550|pdb|2TOD|C Chain C, Ornithine Decarboxylase From Trypanosoma Brucei K69a Mutant In Complex With Alpha-Difluoromethylornithine gi|6573551|pdb|2TOD|D Chain D, Ornithine Decarboxylase From Trypanosoma Brucei K69a Mutant In Complex With Alpha-Difluoromethylornithine Length = 425 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 66/383 (17%), Positives = 117/383 (30%), Gaps = 33/383 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D ++ +T V A+ C W + TL G +S E+ Sbjct: 39 PFFVADLGDIVRKHETWKKCLPR--VTPFYAVACNDDWRVLGTLAALGTGFDCASNTEIQ 96 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E Y K + + K K+ LRI+ Sbjct: 97 RVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 156 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S ++ L+ ++ + +V G+ FH + F+ + + Sbjct: 157 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 216 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234 F + + +GGG T + + K F + I EPG Sbjct: 217 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 276 Query: 235 EAIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLY 275 V + TL V+ V S + D+ + Sbjct: 277 RYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 336 Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + PN Y + V G +C D E ++ +++G+ + FED+ Y + + Sbjct: 337 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 396 Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356 FNG PTI +RE Sbjct: 397 FNGFQSPTIYYVVSGLPDHVVRE 419 >gi|322787419|gb|EFZ13507.1| hypothetical protein SINV_03783 [Solenopsis invicta] Length = 394 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 112/357 (31%), Gaps = 23/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D ++N K V A+KC + L G +S E+ Sbjct: 35 FYIVDLGDIINKHREWTT--KIPRVTPHYAVKCNPDPNVIKILAALNAGFDCASEQEIRE 92 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + + YK A N D I ++ +L K KD + I +R Sbjct: 93 VMQYGVQADRIIFANPYKSPSHIKYAKKMNVDQITVDSEIELLKIKDLYPEAKIVIRIRC 152 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS----AM 178 + S L + + ++G FH +S Sbjct: 153 DAKDSDVDLGLKFGC-ESNDDAVRLIQLTMDLGLTLHGFSFHPGSPCWELNAYSRGIGFC 211 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGEA 236 + I ++ I +GGG + + + + +I EPG Sbjct: 212 RQLIAIAKSMGCKDVQLIDIGGGFPGKRGT-NIDKLASIINDAIQDLDPSIRIISEPGRY 270 Query: 237 IVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDY----LLYQESATIYPNTG 286 V + TL + + ++ + + + + ++ + Sbjct: 271 YVDSAFTLASYLHSKKTAFKNGKFMRMYYTNVGTYNSFIDELLGLKSRVPQTVFGPMSGE 330 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + + V G +C + D+ + + IGD + + DV Y + FNG +P + Sbjct: 331 KFPSTVWGPTCDSYDVIVKDALLPELHIGDWLVWNDVGAYTLCLCTTFNGFPIPKVV 387 >gi|319407636|emb|CBI81285.1| lysine/ornithine decarboxylase [Bartonella sp. 1-1C] Length = 377 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 109/359 (30%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ A+K A + L ++S+ E+ Sbjct: 18 PCLVVDLDVVHENYLNFEKALPQS--RIFYAIKANPAPEILRLLVSLGSSFDAASVAEIE 75 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ K A + ++ K A + Sbjct: 76 MALAAGATANRISFGNTIKKERDIARAHALGISLYAVDCFEEVEKVARAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179 + + P + + + +G+ FH + + L Sbjct: 136 TDGEGAEWPLSQKFGCVPSMAVDV----LRYAHHLGLQAHGVSFHVGSQQTDLNAWDRAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIY 230 + F Q++ +++GGG LK++ + Sbjct: 192 SDTAFVFKSLEQEGIQLQLVNMGGGFPTRYLKDIPTVQTYGMAIFDSLKKYFGNRIPETI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG A+V N + T V+ IS+ KN + + + + + + Y T Y Sbjct: 252 IEPGRAMVGNAGVIRTEVVLISKKGKNDNVRWVYLDIGKFNGLTETMDEAIRYP-IETAY 310 Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + DI E + + IGD + Y + FNG Sbjct: 311 DDKAMEPCILAGPTCDSADIMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASVAFNGF 369 >gi|254699413|ref|ZP_05161241.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 5 str. 513] gi|261749863|ref|ZP_05993572.1| orn/DAP/Arg decarboxylase 2 [Brucella suis bv. 5 str. 513] gi|261739616|gb|EEY27542.1| orn/DAP/Arg decarboxylase 2 [Brucella suis bv. 5 str. 513] Length = 377 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 112/357 (31%), Gaps = 29/357 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ A+K A + L ++S+ E+ Sbjct: 18 PCLVVDTDVVRENYQGFEKALPYS--RIFYAVKANPAPEILRLLASLGSSFDTASVAEIE 75 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E + +Y + A + V ++ K A ++ R Sbjct: 76 MALEAGATPDRISYGNTIKKERDIARAFDLGIRLYAVDCVEEVEKIARVA--PGSRVFCR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + + + ++ + G+ FH + + L + Sbjct: 134 VLTDGEGAEWPLSRKFGCVPAMAKDVLRRAKALGLDAYGVSFHVGSQQTDLTAWDRALAD 193 Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 F + +++GGG L + +E Sbjct: 194 AAAVFRTLADEGIILRMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSRHFGNRIPETIIE 253 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V N + T V+ +S N + ++ + + + YQ T + Sbjct: 254 PGRGMVGNAGVIKTEVVLVSRKADNDNMRWVYLDIGKFGGLAETMDEAIRYQ-IVTPHDG 312 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD I E Y FNG Sbjct: 313 SETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAVAFNGF 369 >gi|13472621|ref|NP_104188.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099] gi|14023367|dbj|BAB49974.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099] Length = 377 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N K+ A+K A + L ++S+ EV Sbjct: 18 PCLVVDLDVVRDNFRAFEKAL--PDSKIYYAVKANPAPEILRLLAAMGSSFDTASVAEVE 75 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ + A + V ++ K A + Sbjct: 76 MAMDAGAPADRISFGNTIKKERDIARAYQLGIRLFAVDCVEEVEKIARVAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + ++ ++ G+ FH + + L Sbjct: 136 TDGEGAEW----PLSRKFGCVPAMAVDVLRHAKGLGLDAYGVSFHVGSQQTDLTAWDRAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + +K F ++ +++GGG L++ + Sbjct: 192 ADAKKVFATLAEEGIVLKMVNMGGGFPTRYLRDVPAAQAYGQAIFSALRKHFGNAIPETI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + + V+ IS+ N + + + + + Y Sbjct: 252 IEPGRGMVGNAGVIKSEVVLISKKADNDNVRWVFLDIGKFGGLAETMDEAIRYPLVTRHD 311 Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD + E Y FNG Sbjct: 312 GSETA-PCVLAGPTCDSADVMYEKTPYPLPLSLTIGDEVLIEGTGAYTTTYSAVAFNGF 369 >gi|330468944|ref|YP_004406687.1| diaminopimelate decarboxylase [Verrucosispora maris AB-18-032] gi|328811915|gb|AEB46087.1| diaminopimelate decarboxylase [Verrucosispora maris AB-18-032] Length = 422 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 107/392 (27%), Gaps = 35/392 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + + V++ +LK + L+ SSL E Sbjct: 20 GTPLYVYDGATITDRYQQLRERLH-PAVRMFYSLKANPNISVCALLHSLGASAEVSSLTE 78 Query: 63 VMLG-HEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ E + E+ A L T+I ++ +L + A +L + Sbjct: 79 LVTAERAGVPAEDIMFLGPGKSRTELTACLKGEVTLICESLGELALIDELAAELGTTARV 138 Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNN----CE 168 + + S K + G + + G + E Sbjct: 139 VLRVNPSFAVKGSGLTMGGKPRQFGIDEAALLAESDLAGRHPSVRLCGFQAYLGTRFLSE 198 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + +L E+ H +E + +GGG+ L + Sbjct: 199 AMIVENTARILDLAERLSQHLAVDLEVVDVGGGLGVAYFAGEQDLDVAALTDQLNPVFAA 258 Query: 229 IY---------LEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES 278 + +E G +V ++ T V + E++ + + D H+ + Sbjct: 259 FHARHPRTVLVMELGRYLVGHSGTYAVQVRYVKESMGERFAVADGGTNHHMAAVGIGSFV 318 Query: 279 ATIYPN--------TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329 +P P V G C D G+ V+ GD I E Y Sbjct: 319 KRNFPMRLLNRDSTAEPVKWNVTGPLCTPNDTIGKAVELPADVRPGDVIGVERSGAYGPT 378 Query: 330 RKN-WFNGINMPTIAVKNVDGTIKAIREFSYN 360 F P + + Sbjct: 379 ASPVHFLSHGYPAEVLIHEGEPRLVRTRDDVE 410 >gi|195383336|ref|XP_002050382.1| GJ22122 [Drosophila virilis] gi|194145179|gb|EDW61575.1| GJ22122 [Drosophila virilis] Length = 392 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + ++ +K A+KC + TL G +S E+ L Sbjct: 31 LNICDLSSVERKFRLWQ--QQLPRIKPYYAVKCNDDSRIVQTLAGLGVGFDCASKNELKL 88 Query: 66 GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E + + + ++ +K + + +R Sbjct: 89 VLDCDVSPERIIFANPCRPISHLDYAKQRQVLKGTVDNEFEIYKLHKHYPNSNLIVRFKS 148 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + + + ++ V G FH + +K + Sbjct: 149 EAKAAQCPLGDKFGCDADIDASALMLLAKALDLTVTGTSFHVGSGCTELEAYERAIKKAK 208 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEKYSVQIYLEPGEAI 237 F ++ + +GGG +D + VK ++ ++I EPG Sbjct: 209 NIFKFGELLGYDLKLLDIGGGFPGSDDEQFVKIAANVNRAVQRHFADERIEIIAEPGRFF 268 Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 V TL + E V S + D+ L + Sbjct: 269 VAAAYTLVCKIHAKREVRNAAGKLDTVMYYLNDGVYGSFNCILYDHQLVTAQHYLEGAES 328 Query: 287 PYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T + G SC A D E + GD + F ++ Y + + FNG +P Sbjct: 329 LPTFKSLIWGPSCDALDKISENLRLPNLNRGDLLGFPNMGAYTVPIASAFNGFPLP 384 >gi|90418748|ref|ZP_01226659.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1] gi|90336828|gb|EAS50533.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1] Length = 377 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 102/357 (28%), Gaps = 29/357 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ + A+K A + L +S+ EV Sbjct: 18 PCLIVDLDIVEDNFNAFRKALPDSA--IFYAVKANPAPEVLKLLAGLGSNFDCASVAEVE 75 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + +Y + A + V ++ K A + Sbjct: 76 MALNAGATPRRISYGNTIKKERDIARAHQLGVALFAVDCVEEVEKVARAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + P + + G+ FH + + A + + Sbjct: 136 TDGEGAEWPLSRKFGCVPDMAIDVLVH--ANALGLVATGVSFHVGSQQTDTGAWDAAIAD 193 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLE 232 F + +++GGG + L+ + +E Sbjct: 194 ARFVFEALAEKGIVLTLVNMGGGFPTRYLKDVPAAAEYGRAIFASLRTHFGNRLPETIIE 253 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V + + V+ +S+ ++ + + + Y T + Sbjct: 254 PGRGMVGDAGVVKAEVVLVSKKSDTDANRWVYLDIGKFGGLAETMDEAIRYP-IVTRHDG 312 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 ++ G +C + D+ E + + +GD + E Y + FNG Sbjct: 313 GATEPCVIAGPTCDSADVLYEKTPYPLPLALTVGDEVLIEGTGAYTTTYASVAFNGF 369 >gi|330501823|ref|YP_004378692.1| ornithine decarboxylase [Pseudomonas mendocina NK-01] gi|328916109|gb|AEB56940.1| ornithine decarboxylase [Pseudomonas mendocina NK-01] Length = 387 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 117/361 (32%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID+Q + + D K+ A+K A + + L +S+YE Sbjct: 25 ETPFVVIDRQIIADAYDQLGNCF--PFAKVYYAVKANPATEIIELLRDKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + G E +Y K ++ + L A + Sbjct: 83 LDKVMATGVGPERISYGNTIKKSRDIRYFFDKGVRLFATDSEADLRNIAKAAPGSKIYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + S S + + I ++ + G+ FH + + + A Sbjct: 143 ILTEGSNSA---DWPLSRKFGCQPDMALDLLILAKQLGLVPYGISFHVGSQQRDIDVWDA 199 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRL----KEFSEKYSV 227 + ++ F ++ I++GGG + ++ + + + KE Sbjct: 200 AIAKVKVIFERLKEEDGITLQMINMGGGFPANYIQRTNDLETYAEEITRFLKEDFGDELP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG +++ N L + V+ ++ + + + + Sbjct: 260 EIILEPGRSLIANAGVLVSEVVLVARKSRTAVERWVYADVGKFSGLIETMDEAIKFPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI E + + GDR+ + Y + FNG Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLASGDRLYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|158300267|ref|XP_320233.4| AGAP012308-PA [Anopheles gambiae str. PEST] gi|157013076|gb|EAA00673.4| AGAP012308-PA [Anopheles gambiae str. PEST] Length = 414 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 121/363 (33%), Gaps = 31/363 (8%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY 77 +++R V A+KC + TL G +S E+ + + Sbjct: 53 KHLVWLRSMPRVTPFYAVKCNDDPAILATLAALGTGFDCASEAEMRTILALGVTPDRIIF 112 Query: 78 NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN 137 K + A ++ K + ++ LRI L Sbjct: 113 AHPIKSVQALAFAKAHGIRRMTFDNECELEKVAREYPEAELVLRIRHDSDRVLIALGKKF 172 Query: 138 RPFSR-LGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG----HFITQ 192 +R G + ++ V G+ FH C + CF + + F + Sbjct: 173 GCDARGDGRVLLARAQALGVAVIGVSFHVGCGSLDADCFYHAIASARSVFDYAKDELGMR 232 Query: 193 IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLN 245 + + +GGG D D P+ + + + +++ + EPG V + TL Sbjct: 233 LWLLDVGGGFP-GDNDKPIDQYAEAVSRALQEFFPPEQDEEVYVLGEPGRFYVGSAATLL 291 Query: 246 TTVL-------DISENIKNLVIVDSSVEAHVPDYLLYQESATI----------YPNTGPY 288 TTV D + + + ++ V + D+L +E + + + Sbjct: 292 TTVQGKKIVRDDAGQIQQMMYYINDGVFGTLFDWLSLREIKDLKRAVPLVRREREHEPAF 351 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 + G +C + DI E IGD I FE++ Y + FNG PT+ V + Sbjct: 352 PTTIWGPTCDSTDIVCEDVPYPEHHIGDYIVFENLGAYGMTFATNFNGFPKPTVQVYVKE 411 Query: 349 GTI 351 T Sbjct: 412 HTW 414 >gi|319781640|ref|YP_004141116.1| ornithine decarboxylase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167528|gb|ADV11066.1| Ornithine decarboxylase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 377 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 105/362 (29%), Gaps = 34/362 (9%) Query: 3 KT-PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 T P ++D + +N ++ A+K A + L ++S+ Sbjct: 15 PTGPCLVVDLDVVRDNFRAFEKAL--PDSRIYYAVKANPAPEILRLLAAMGSSFDTASVA 72 Query: 62 EVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 EV + + ++ + A + V ++ K A Sbjct: 73 EVEMAMDAGAPADRISFGNTIKKERDIARAYQLGIRLFAVDCVEEVEKIARVAPGARVFC 132 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176 + + + + ++ ++ G+ FH + + Sbjct: 133 RVLTDGEGAEW----PLSRKFGCVPAMAVDVLRHAKGLGLDAYGVSFHVGSQQTDLTAWD 188 Query: 177 AMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSV 227 L + + F ++ +++GGG L++ Sbjct: 189 RALADAKVVFATLAEEGIVLKMVNMGGGFPTRYLRDVPAAQAYGQAIFSALRKHFGNAIP 248 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESA 279 + +EPG +V N + + V+ IS+ N + + + + + Y Sbjct: 249 ETIIEPGRGMVGNAGVIKSEVVLISKKAANDNVRWVFLDIGKFGGLAETMDEAIRYPIVT 308 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FN 335 ++ G +C + D+ E + + IGD + E Y FN Sbjct: 309 AHDGTETA-PCVLAGPTCDSADVMYEKTPYPLPLSLTIGDEVLIEGTGAYTTTYSAVAFN 367 Query: 336 GI 337 G Sbjct: 368 GF 369 >gi|188582859|ref|YP_001926304.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001] gi|179346357|gb|ACB81769.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001] Length = 429 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 50/390 (12%), Positives = 100/390 (25%), Gaps = 39/390 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + ++ ++K + + G +S E Sbjct: 39 GTPLFVYDAATMRRTYRALCAAVA-SFAEVDFSVKASPNPAVIRVFREEGAGAEIASGAE 97 Query: 63 VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + K V N I ++ + A++ + Sbjct: 98 FEAALKAGVAPEKILFAGPGKGAADLDRVVAGNIGEIHLENREEMVRVAAAAERHGVTVR 157 Query: 120 LRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKS 171 + + + P E D +E+ + + GL + Sbjct: 158 VALRINPGATAQGGAMRMGGKPSPFGFDEEEMETAIDAVEAMPRLRLVGLHLFAGTQGLK 217 Query: 172 FLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----------KDFCQ 216 + +E I LGGG+ D Sbjct: 218 AETLLGQWAYGLGLAARIAQRTGRALETIDLGGGLGIPYFSGEAALDLGAIRAGLPDLIA 277 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY---- 272 L+ ++ LEPG + + VL + ++ + ++ H Sbjct: 278 TLRADPRLAGARVVLEPGRYLAGSAGLYVARVLAVKDSRGSRFVITDGGMHHHLAASGNL 337 Query: 273 -----LLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + +A + P A V G C D+ P+ GD ++ Y Sbjct: 338 GQIVKRDFPLAAVVEDPEAPRAATAVVGPLCTPLDMLARAAPLPPLAEGDLVAVLQSGAY 397 Query: 327 NINRK-NWFNGINMPTIAVKNVDGTIKAIR 355 + F P + G + IR Sbjct: 398 GLTASPTGFLSHPTPAEVLV-EGGRAEMIR 426 >gi|251790262|ref|YP_003004983.1| Diaminopimelate decarboxylase [Dickeya zeae Ech1591] gi|247538883|gb|ACT07504.1| Diaminopimelate decarboxylase [Dickeya zeae Ech1591] Length = 418 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 52/377 (13%), Positives = 102/377 (27%), Gaps = 32/377 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D L ++ + GV+L A+K + + D + + G SS E+ Sbjct: 26 AFVYDLTALRRHVGEVMAALP-PGVELYYAIKANSEKPILDAIAPLVHGFEISSGGEIAR 84 Query: 66 GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + ++ A+ + I + ++ + + +A++ + I Sbjct: 85 VAGCATRKPFVFSGPGKLDSDFDLALEQGVEAIHVESRHEIARLQQRAKRHGVVQPVFIR 144 Query: 124 PSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + L + +D + + G H Sbjct: 145 INPELASSLTSKLAMAGTPTPFGMDEADLPDAVRDVDNASHLQLKGFHVHAMSHQMVVER 204 Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225 +L + + I +++GGGI + + C L+ + Sbjct: 205 HQQLLDLYLTRWPQWKALSAQPQLITHLNVGGGIGVPYLTPERFDWPALCDYLRTRLAQQ 264 Query: 226 SVQIY--LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 EPG I VLD + +V + I+ Sbjct: 265 PDVPVVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVCRGGTHQFRLPVAQGHDHPVIH 324 Query: 283 -------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334 V G+ C D+ V IGD + Y N + F Sbjct: 325 LPLTSMPTTGETRDWTVVGQLCTPKDVLSRDQRLTDVNIGDLLVLPLAGAYGYNISHADF 384 Query: 335 NGINMPTIAVKNVDGTI 351 P DG I Sbjct: 385 LCHPRPEQYFLIDDGVI 401 >gi|134291178|ref|YP_001114947.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia vietnamiensis G4] gi|134134367|gb|ABO58692.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia vietnamiensis G4] Length = 402 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 41/375 (10%), Positives = 95/375 (25%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+++ D+ L + G+ L ++K + L MDG +S E+ Sbjct: 29 TPFFVYDRATLDARVCMLRETLP-TGIDLHYSVKANPLPAVVHHLAPQMDGFDVASANEM 87 Query: 64 MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E + ++ +++ I +V+QL +L + + Sbjct: 88 AVALNAGMPAELIGFAGPGKSRDDLRRAVASGVNIHLESVTQLRLVTALGWELGVQPKVA 147 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 I + + S G + +++ + G + Sbjct: 148 IRVNPDFHVDHSGMRMGGGASPFGLDAEQVPELLRELDARDVTLAGFHIFWGSQCLHAPT 207 Query: 175 FSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225 + + ++++ GGG + + + Sbjct: 208 VIHAQRKSADLVVRLAGGLPVAPQYVNFGGGFGIPYFAGETPLDLAAVADAMHDWLGVLR 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH----------VPD 271 + LE G +V ++D + ++ H + Sbjct: 268 GRLPGTRTVLEFGRYLVGEAGIYVCRIIDRKISRDRTFLITDGGLHHHLAASGNFGQILR 327 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + G C D + +IGD + Y + Sbjct: 328 RNFPVTIGNRQTQAPTERCHIVGCLCTPLDRIADDVLLPEAQIGDFVVVFQSGAYGRSAS 387 Query: 332 N-WFNGINMPTIAVK 345 F G + Sbjct: 388 PRNFLGHPDAIEMLV 402 >gi|187922157|ref|YP_001893799.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia phytofirmans PsJN] gi|187713351|gb|ACD14575.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia phytofirmans PsJN] Length = 402 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 44/376 (11%), Positives = 105/376 (27%), Gaps = 34/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP++ D+ + + + +A ++L ++K + L Q +DG +S E Sbjct: 28 QTPFFAYDRSAIDTRVRELRSLLPSA-MQLHYSIKANPMPAVIHYLAQRVDGFDVASAQE 86 Query: 63 VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + L ++ + ++ +++ + + +QL +L + + Sbjct: 87 MALALDAGATPDSIGFAGPGKSHDDLRRAVASGVNVHVESDTQLRLVTALGWELGVQPNV 146 Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKS-- 171 I + + G + + G + Sbjct: 147 VIRINPDFQVGHSGMRMGGSAAPFGVDVDQIPALLHELETREVALAGFHVFWGSQCLHAS 206 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKY 225 + I + + +++LGGG K C+ + ++ + Sbjct: 207 TIIEAQRQSVDLILRLASDLPRPLRFVNLGGGFGIPYFPGETPLDTKVVCEAMHDWLPRL 266 Query: 226 SVQ-----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-----LLY 275 + LE G +V V+D + ++ H + Sbjct: 267 CERLPGTTPILELGRYLVGEAGIYVCRVIDRKVSRGRTFVITDGGLHHHLAASGNFGQVL 326 Query: 276 QESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + + + P V G C D + IGD + + Y + Sbjct: 327 RRNFPVVIGNRPDGISRERCYVVGCLCTPLDRLADDVELPEAHIGDFVVVKQSGAYGHSA 386 Query: 331 KN-WFNGINMPTIAVK 345 F P + Sbjct: 387 SPVHFLSHPEPVEMLV 402 >gi|307293323|ref|ZP_07573169.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Sphingobium chlorophenolicum L-1] gi|306881389|gb|EFN12605.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Sphingobium chlorophenolicum L-1] Length = 410 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 52/377 (13%), Positives = 100/377 (26%), Gaps = 35/377 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + L A+K + + + +DG +S E Sbjct: 34 DTPLFVYDMAIVEGQARAFRDAMPPTLP-LHYAVKANPYAPLLQRMAKLVDGFDVASGGE 92 Query: 63 VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + E ++ +D E+ A + + TI + + + ++ + L Sbjct: 93 LTRALEAGMDPAHISFAGPGKRDDELIAAIDSGTTINLESEGEARRAIALGEQRGRTPKL 152 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL 173 I + + K G + + + ++ G + Sbjct: 153 AIRVNPDFDLKGSGMRMGGGAKPFGVDAERAADLARRVIDAGADWRGWHIFAGSQALGVE 212 Query: 174 CFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 ++LGGG + + + E + Q Sbjct: 213 ALIETQAATIDLATRLSDAVGVTPPLVNLGGGFGIPYFPGDERLDIRPIGEALDMLLEQR 272 Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------V 269 +E G +V T ++DI ++ IV H V Sbjct: 273 ADILQGSEFAMELGRWLVGEAGVYLTRIVDIKKSQGETFIVVDGGLHHQLAASGNFGTVV 332 Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + A V G C D G+ PV+ GD I+ Y + Sbjct: 333 RRNYPIAVANRFGQAPAQEAATVVGCLCTPIDRLGDKVALPPVEEGDLIAIFLAGAYGAS 392 Query: 330 RKN-WFNGINMPTIAVK 345 F G P + Sbjct: 393 ASPAAFLGHPAPLELLI 409 >gi|327297983|ref|XP_003233685.1| ornithine decarboxylase [Trichophyton rubrum CBS 118892] gi|326463863|gb|EGD89316.1| ornithine decarboxylase [Trichophyton rubrum CBS 118892] Length = 460 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 56/389 (14%), Positives = 110/389 (28%), Gaps = 42/389 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + +G +S E+ Sbjct: 73 PFYVADLGEVYRQHIRWKTNLPR--VKPFYAVKCNPDPQVLRLMAVLGNGFDCASKAEID 130 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L Y K S + +K K ++ LRI Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKEMCPDAELYLRIL 190 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + NV G+ FH + F +++ Sbjct: 191 TDDSASLCRLSMKFGASLSSARPLLELAHGLGLNVVGVSFHVGSGAEDPKSFIKAVQDAR 250 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L + + +++ EPG V Sbjct: 251 FVFDCAAEIGFDLKVLDVGGGFSDDTFEPFAAALGDALDTYFPPH-IRVIAEPGRYYVAT 309 Query: 241 TTTLNTTVLDISE-------------------------NIKNLVIVDSSVEAHVPDYLLY 275 TL V+ + + ++ ++ V + + + Sbjct: 310 AFTLAANVIARRDVGVEELLSDSESDSTTPSRASTPSSSGAYMIYLNDGVYGNFSNIVFD 369 Query: 276 QESA-------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYN 327 + + P + G +C D+ E + +G+ + FE++ Y Sbjct: 370 HQHPVAQILTKDDDYTSAPIEYSIWGPTCDGIDVISERVTLNGLLGVGNWLYFENMGAYT 429 Query: 328 INRKNWFNGI--NMPTIAVKNVDGTIKAI 354 FNG I + G + Sbjct: 430 QCSATRFNGFTDKHEVIYIVTEPGAAALL 458 >gi|84500171|ref|ZP_00998437.1| decarboxylase, pyridoxal-dependent [Oceanicola batsensis HTCC2597] gi|84392105|gb|EAQ04373.1| decarboxylase, pyridoxal-dependent [Oceanicola batsensis HTCC2597] Length = 390 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 113/362 (31%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +ID ++ ++ A+K + + L G ++S E+ Sbjct: 32 PTLVIDVDRVEEQYHALKAGLGR--ARIHYAVKANPQREIVERLVDLGSGFDAASRAEIE 89 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L E ++ K +F ++ K ++ +R+ Sbjct: 90 LCLSLGARPENISFGNTVKKVRDIEFAWGAGVTLFAADAEEELEKIAEHAPGAEVYIRLI 149 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAMLK 180 S + + L+ D G FH + K + + Sbjct: 150 VDASEADWPLSRKFGCARDKAIMLLDMARELGLRPVGFSFHVGSQTKRAEMWTATLDQVA 209 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYSVQIYL--EPGE 235 + + ++ +++GGG + P + ++ +E++ ++ EPG Sbjct: 210 AVWEAAKEAGHELTLLNIGGGFPAYYGEEIQRPTAYAARVMELITERFGDVAHVMAEPGR 269 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287 +V + VL +S +N + S + + + + YQ T + Sbjct: 270 GLVAEAGAIAAEVLLVSRKSENDLHRWVYLDIGKFSGLAETMDEAIRYQF-LTERDHEAT 328 Query: 288 YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343 ++ G SC + D+ E ++ GDR + Y + FNG + Sbjct: 329 GPCILAGPSCDSADVLYEKRPVELPLGLRSGDRFIIRNCGAYTSTYASVGFNGFPPLDVV 388 Query: 344 VK 345 V Sbjct: 389 VL 390 >gi|321451794|gb|EFX63336.1| hypothetical protein DAPPUDRAFT_204767 [Daphnia pulex] Length = 517 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 105/366 (28%), Gaps = 30/366 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D ++ K V A+KC + +TL +S E+ Sbjct: 43 FYVLDVGDIIRKHKEWK--LKMPRVAPFYAVKCNDNRTVLETLASLGASFDCASKSEIAK 100 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + + K S+ + ++ +K K K+ LRI Sbjct: 101 VLDLGVETDRIIFANPAKQVSHIRYASSVNVQAMTFDNESELYKVKEHHPTAKMVLRIRC 160 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + L F + + ++ G+ FH F + + Sbjct: 161 DAKRVQCPLGIKFGAFPKDAPRLVALAAKLGVDLVGISFHVGSGCDEPEVFERCIVIGRQ 220 Query: 185 EF----GHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFSEKYSVQIYLEPGEA 236 F + + + LGGG + F E V I EPG Sbjct: 221 IFDLAARDYGINMTLLDLGGGYPGNRGSSINSIAAIVNSSLDRHFPEGCGVDIIAEPGRY 280 Query: 237 IVTNTTTLNTTVLDISEN-------------------IKNLVIVDSSVEAHVPDYLLYQE 277 V + TL T + + V S + D+ + Sbjct: 281 YVASAFTLATRIHGRRQLTNDDEDADGPRTPANTSYFYYINDGVYGSFNCMLYDHAVVTP 340 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 ++ + G +C D + +GD + FED+ Y + FNG Sbjct: 341 LLLEPRPGPDFSCNIWGPTCDGLDRIATNAQLPLMDVGDWLIFEDMGAYTLAAAGCFNGF 400 Query: 338 NMPTIA 343 +P + Sbjct: 401 PVPKVY 406 >gi|146281380|ref|YP_001171533.1| ornithine decarboxylase [Pseudomonas stutzeri A1501] gi|145569585|gb|ABP78691.1| probable ornithine decarboxylase [Pseudomonas stutzeri A1501] gi|327479557|gb|AEA82867.1| ornithine decarboxylase [Pseudomonas stutzeri DSM 4166] Length = 387 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + + D + K+ A+K A + D L +S+YE Sbjct: 25 ETPFVVIDTETISKAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLRDKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + G E +Y K +F T S+ + ++ A+ Sbjct: 83 LDKVMSRGVGPERISYGNTIKKSRDIRYFFEKGVRMFATDSEAD-LRNIAKAAPGAKVYV 141 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + + I + + G+ FH + + + A + Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARQLGLEPYGISFHVGSQQRDISVWDAAI 201 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F +++ I++GGG ++ + LKE +I Sbjct: 202 AKVKVIFERLKEEDGIELKMINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEI 261 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG +++ N L + V+ ++ + + + + + Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYVDVGKFSGLIETMDESIKFPIYTEK 321 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 322 KGEVEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380 >gi|255326256|ref|ZP_05367342.1| diaminopimelate decarboxylase [Rothia mucilaginosa ATCC 25296] gi|255296710|gb|EET76041.1| diaminopimelate decarboxylase [Rothia mucilaginosa ATCC 25296] Length = 506 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 57/446 (12%), Positives = 116/446 (26%), Gaps = 84/446 (18%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56 +TP Y+ + + A V + A K F + + + Sbjct: 54 ETPQYVFSETTFRTRARAYRTAFEQAFAAHGAKVSVYYAGKSFLSTAVARWATEEGLCLD 113 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA-- 111 ++S E+ L + G A + K A+ + ++ ++V +L + Sbjct: 114 TASGGELALALRAQVPGANIALHGNNKSEAEIARAIRNGLGRVVADSVDELKLIERVYAE 173 Query: 112 -----------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC----------KDK 150 + +RI P V S + G ++ Sbjct: 174 LAAERVAEGEEPYAPVPVLIRITPGVHASTHESIATAHEDQKFGMSLQLGTAALAGLEEA 233 Query: 151 IESEIK---------------------NVNGLMFHNNCENKSFLCFSAML----KNIEKE 185 + G+ H + F + + + Sbjct: 234 EMEHWGVEATDSYAALAAAILNATDSLDFRGIHCHIGSQIFEAEGFEQAATTALEFMNRL 293 Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFC-----------QRLKEFSEKYSVQIYLEPG 234 + + LGGG + E + EPG Sbjct: 294 NRDLGVTLPELDLGGGYGIGYTEADHPRSITEVTESIAASVAATCERLGMAIPHMSFEPG 353 Query: 235 EAIVTNTTTLNTTVLDISE----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 +I + TV I ++ V VD + + L + + N Sbjct: 354 RSISGPSGATLYTVGTIKNVSIEDENGEIRVRRYVSVDGGMSDNARPVLYESDYSVTLAN 413 Query: 285 TGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINM 339 P + V G+ C +GD+ + + ++ GD ++ Y + +N + Sbjct: 414 RAPAGEQVLSRVVGKHCESGDVVVRYCYLPADLQAGDILAVPATGAYCYVLGSNYNFLTR 473 Query: 340 PTIAVKNVDG-TIKAIREFSYNDYYN 364 P + + IR D Sbjct: 474 PPVIATAEGKPSRVMIRRQREEDMLA 499 >gi|67526777|ref|XP_661450.1| hypothetical protein AN3846.2 [Aspergillus nidulans FGSC A4] gi|40739921|gb|EAA59111.1| hypothetical protein AN3846.2 [Aspergillus nidulans FGSC A4] Length = 450 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 106/361 (29%), Gaps = 35/361 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLL--ALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +Y+ D ++ + + V+ A+KC + + + +G +S E+ Sbjct: 75 FYVADMGEVYR--QHLRWKMNLSRVRPFYELAVKCNPDPEVLRLMAKLGNGFDCASKAEI 132 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y K + + +K KA ++ LRI Sbjct: 133 DMALSTGVDPSRIIYAQPCKTKSYLRHAAKVGVKQMTFDNADELYKIKACYPEAELYLRI 192 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 S S + + + + + G+ FH + F +++ Sbjct: 193 LTDDSNSLCQFSMKFGASLDVARQLLELAHQLELKIVGVSFHVGSGAEDPKAFLKAVQDA 252 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEA 236 F ++ + +GGG + F L E Y I EPG Sbjct: 253 RLVFDQAAEIGHELHTLDVGGGF----TGETFEKFAAVLDSALETYFPPNIRIIAEPGRY 308 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY-------- 288 V TL ++ + ++ D + S I+ + P Sbjct: 309 YVGGAFTLAANIIARRGVQDPENPSKDAYMIYLNDGVYGNFSNIIFDHQHPEARILSCAS 368 Query: 289 -----------TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336 T + G +C D+ + + +GD + FE++ Y FNG Sbjct: 369 EINGRPVSEDVTYSIWGPTCDGIDVISQRSVLPGLLDVGDWLYFEEMGAYTRCSATRFNG 428 Query: 337 I 337 Sbjct: 429 F 429 >gi|326333860|ref|ZP_08200093.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nocardioidaceae bacterium Broad-1] gi|325948442|gb|EGD40549.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nocardioidaceae bacterium Broad-1] Length = 397 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 47/375 (12%), Positives = 105/375 (28%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP++ D+ + + + V L A+K + L + +D +S E+ Sbjct: 24 TPFFAYDRAAIDARVASLRSALPE-DVHLSYAVKANPMPAVVQHLARTVDALDVASGAEM 82 Query: 64 MLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + G E+ ++ + + + ++ + A++L + + Sbjct: 83 RVALDTGIAPGSVSFAGPGKSVAELTQAVAAGVLVEIESPLEADRLVEAAERLGLRPRVA 142 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 + + K + G + + V G + +N Sbjct: 143 VRVNPDFEVKGSGMRMGGGAQQFGVDAETVPLLLKTLHDRDVEVAGFHVFSGSQNLHAEI 202 Query: 175 ----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225 + + + + + ++++GGG + E+ Sbjct: 203 LASAQESTVDLVLRLADDLPAAMTYLNIGGGFGIPYYAQDRPLDLDLVGSRLEELLARRV 262 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 S Q+ +E G +V T V+D + +V H Sbjct: 263 RPSLPSAQVVIELGRYLVGEAGVYVTRVVDRKISRGKTFLVVDGGMHHQLAASGNFGQVI 322 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 Y S T V G C D+ G+ ++GD + Y + Sbjct: 323 RRNYPISVAAAREGEEETVQVVGCLCTPLDLLGDKVSLPRAEVGDLVVVHQAGAYGLTAS 382 Query: 332 NW-FNGINMPTIAVK 345 F P + Sbjct: 383 PTAFLSHPAPLEVLV 397 >gi|330955127|gb|EGH55387.1| diaminopimelate decarboxylase [Pseudomonas syringae Cit 7] Length = 402 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 56/378 (14%), Positives = 118/378 (31%), Gaps = 32/378 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D L ++ + AGV+L A+K + M +TL + G SS E+ Sbjct: 25 AFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83 Query: 66 GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + ++ D ++ + L N I +++++ + + A++ + + + Sbjct: 84 VMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGRVQPVFLR 143 Query: 124 PSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + L E + + + G H S Sbjct: 144 INPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHVHAMSHQMSVER 203 Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225 +L + + + Q+ ++GGGI + + + C+ L++ + Sbjct: 204 HEQLLDFYLQRWQEWKALARDPSQLTHFNVGGGIGVDYLNSQQFDWQRLCRYLEKRLGEQ 263 Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 L EPG I VLD + +V + I+ Sbjct: 264 HDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQSHDHPVIH 323 Query: 283 PNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334 P + + G+ C D+ K V IGD + Y N + F Sbjct: 324 LPNAPQSTESSEQAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGYNISHADF 383 Query: 335 NGINMPTIAVKNVDGTIK 352 P+ ++ Sbjct: 384 LCHPRPSQHFVRNGERVR 401 >gi|23499865|ref|NP_699305.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Brucella suis 1330] gi|62317058|ref|YP_222911.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Brucella abortus bv. 1 str. 9-941] gi|83269051|ref|YP_418342.1| Orn/DAP/Arg decarboxylase family protein [Brucella melitensis biovar Abortus 2308] gi|148558692|ref|YP_001257169.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Brucella ovis ATCC 25840] gi|161620188|ref|YP_001594074.1| lysine/ornithine decarboxylase [Brucella canis ATCC 23365] gi|163844298|ref|YP_001621953.1| hypothetical protein BSUIS_B0106 [Brucella suis ATCC 23445] gi|189022323|ref|YP_001932064.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus S19] gi|225628577|ref|ZP_03786611.1| Lysine/ornithine decarboxylase [Brucella ceti str. Cudo] gi|237816619|ref|ZP_04595611.1| Lysine/ornithine decarboxylase [Brucella abortus str. 2308 A] gi|254691458|ref|ZP_05154712.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 6 str. 870] gi|254698345|ref|ZP_05160173.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 2 str. 86/8/59] gi|254702533|ref|ZP_05164361.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 3 str. 686] gi|254706342|ref|ZP_05168170.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis M163/99/10] gi|254711368|ref|ZP_05173179.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis B2/94] gi|254711967|ref|ZP_05173778.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M644/93/1] gi|254715037|ref|ZP_05176848.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M13/05/1] gi|254720654|ref|ZP_05182465.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella sp. 83/13] gi|254731788|ref|ZP_05190366.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 4 str. 292] gi|256014892|ref|YP_003104901.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Brucella microti CCM 4915] gi|256030002|ref|ZP_05443616.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis M292/94/1] gi|256059653|ref|ZP_05449850.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella neotomae 5K33] gi|256158166|ref|ZP_05456082.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M490/95/1] gi|256252883|ref|ZP_05458419.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti B1/94] gi|256256643|ref|ZP_05462179.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 9 str. C68] gi|260166947|ref|ZP_05753758.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Brucella sp. F5/99] gi|260544294|ref|ZP_05820115.1| orn/DAP/Arg decarboxylase, family 2 [Brucella abortus NCTC 8038] gi|260568562|ref|ZP_05839031.1| orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 4 str. 40] gi|260757077|ref|ZP_05869425.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 6 str. 870] gi|260759553|ref|ZP_05871901.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 4 str. 292] gi|260762798|ref|ZP_05875130.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 2 str. 86/8/59] gi|260882887|ref|ZP_05894501.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 9 str. C68] gi|261216741|ref|ZP_05931022.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M13/05/1] gi|261219971|ref|ZP_05934252.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti B1/94] gi|261313787|ref|ZP_05952984.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis M163/99/10] gi|261318973|ref|ZP_05958170.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis B2/94] gi|261319608|ref|ZP_05958805.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M644/93/1] gi|261323625|ref|ZP_05962822.1| orn/DAP/Arg decarboxylase 2 [Brucella neotomae 5K33] gi|261753106|ref|ZP_05996815.1| orn/DAP/Arg decarboxylase 2 [Brucella suis bv. 3 str. 686] gi|261756332|ref|ZP_06000041.1| orn/DAP/Arg decarboxylase [Brucella sp. F5/99] gi|265985700|ref|ZP_06098435.1| orn/DAP/Arg decarboxylase 2 [Brucella sp. 83/13] gi|265987023|ref|ZP_06099580.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis M292/94/1] gi|265996684|ref|ZP_06109241.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M490/95/1] gi|294853126|ref|ZP_06793798.1| ornithine decarboxylase [Brucella sp. NVSL 07-0026] gi|297249998|ref|ZP_06933699.1| ornithine decarboxylase [Brucella abortus bv. 5 str. B3196] gi|306837380|ref|ZP_07470259.1| ornithine decarboxylase [Brucella sp. NF 2653] gi|306841124|ref|ZP_07473842.1| ornithine decarboxylase [Brucella sp. BO2] gi|306845478|ref|ZP_07478051.1| ornithine decarboxylase [Brucella sp. BO1] gi|23463438|gb|AAN33310.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Brucella suis 1330] gi|62197251|gb|AAX75550.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Brucella abortus bv. 1 str. 9-941] gi|82939325|emb|CAJ12264.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis biovar Abortus 2308] gi|148369977|gb|ABQ62849.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Brucella ovis ATCC 25840] gi|161336999|gb|ABX63303.1| Lysine/ornithine decarboxylase [Brucella canis ATCC 23365] gi|163675021|gb|ABY39131.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189020897|gb|ACD73618.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus S19] gi|225616423|gb|EEH13471.1| Lysine/ornithine decarboxylase [Brucella ceti str. Cudo] gi|237787432|gb|EEP61648.1| Lysine/ornithine decarboxylase [Brucella abortus str. 2308 A] gi|255997552|gb|ACU49239.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Brucella microti CCM 4915] gi|260097565|gb|EEW81439.1| orn/DAP/Arg decarboxylase, family 2 [Brucella abortus NCTC 8038] gi|260155227|gb|EEW90308.1| orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 4 str. 40] gi|260669871|gb|EEX56811.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 4 str. 292] gi|260673219|gb|EEX60040.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 2 str. 86/8/59] gi|260677185|gb|EEX64006.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 6 str. 870] gi|260872415|gb|EEX79484.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 9 str. C68] gi|260918555|gb|EEX85208.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti B1/94] gi|260921830|gb|EEX88398.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M13/05/1] gi|261292298|gb|EEX95794.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M644/93/1] gi|261298196|gb|EEY01693.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis B2/94] gi|261299605|gb|EEY03102.1| orn/DAP/Arg decarboxylase 2 [Brucella neotomae 5K33] gi|261302813|gb|EEY06310.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis M163/99/10] gi|261736316|gb|EEY24312.1| orn/DAP/Arg decarboxylase [Brucella sp. F5/99] gi|261742859|gb|EEY30785.1| orn/DAP/Arg decarboxylase 2 [Brucella suis bv. 3 str. 686] gi|262550981|gb|EEZ07142.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M490/95/1] gi|264659220|gb|EEZ29481.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis M292/94/1] gi|264664292|gb|EEZ34553.1| orn/DAP/Arg decarboxylase 2 [Brucella sp. 83/13] gi|294818781|gb|EFG35781.1| ornithine decarboxylase [Brucella sp. NVSL 07-0026] gi|297173867|gb|EFH33231.1| ornithine decarboxylase [Brucella abortus bv. 5 str. B3196] gi|306274129|gb|EFM55948.1| ornithine decarboxylase [Brucella sp. BO1] gi|306288845|gb|EFM60159.1| ornithine decarboxylase [Brucella sp. BO2] gi|306407572|gb|EFM63772.1| ornithine decarboxylase [Brucella sp. NF 2653] Length = 377 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 112/357 (31%), Gaps = 29/357 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ A+K A + L ++S+ E+ Sbjct: 18 PCLVVDTDVVRENYQGFEKALPYS--RIFYAVKANPAPEILRLLASLGSSFDTASVAEIE 75 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E + +Y + A + V ++ K A ++ R Sbjct: 76 MALEAGATPDRISYGNTIKKERDIARAFDLGIRLYAVDCVEEVEKIARVA--PGSRVFCR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + + + ++ + G+ FH + + L + Sbjct: 134 VLTDGEGAEWPLSRKFGCVPAMAKDVLRRAKALGLDAYGVSFHVGSQQTDLTAWDRALAD 193 Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 F + +++GGG L + +E Sbjct: 194 AAAVFRTLADEGIILRMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSRHFGNRIPETIIE 253 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V N + T V+ +S N + ++ + + + YQ T + Sbjct: 254 PGRGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRYQ-IVTPHDG 312 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD I E Y FNG Sbjct: 313 SETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAVAFNGF 369 >gi|325190815|emb|CCA25305.1| ornithine decarboxylase 1 putative [Albugo laibachii Nc14] Length = 599 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 107/387 (27%), Gaps = 35/387 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D L VK A+KC + TL G +S E+ Sbjct: 206 FYVVDLHALEKRYQLWNKHL--PFVKPFYAVKCNPDQQLLQTLAHLGCGFDCASRAEIDA 263 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y K + + + F++ +L+K + + L + Sbjct: 264 VLRLGVHAKEIIYANPCKQPSHIRHSASQSVNLMTFDSHDELDKIEATNSNAKLVLRLYV 323 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + +V G+ FH S +S +K Sbjct: 324 -DDTKAICRLGTKFGAMLHDVPSILSHAKT-LGLDVVGVSFHVGSGCYSVSAYSDAVKRA 381 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEP 233 F + E + +GGG T+ C K F VQ+ EP Sbjct: 382 RTAFDIGANLGFSFELLDIGGGFPGTENGPITFKECAQELATSLEKWFPRSSHVQVISEP 441 Query: 234 GEAIVTNTTTLNTTVLDIS----------------ENIKNLVIVDSSVEAHVPDYLLYQE 277 G +T TL V+ + S + D+ Q Sbjct: 442 GRFFAASTHTLAACVIGRKVAPILESFVHETVESSYMYFINDGLYGSFNCLIYDHPDIQP 501 Query: 278 SATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + G +C D + +++G I F + Y + F Sbjct: 502 VVLATEPVNSKDFRLASIWGPTCDGMDCIMKDIRMPQLRVGQWICFPSMGAYTCAAGSDF 561 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYND 361 NG P + + +E ++D Sbjct: 562 NGFAPPAKLYIDTKQLFEFRQEMQFSD 588 >gi|17989478|ref|NP_542111.1| ornithine decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|225685964|ref|YP_002733936.1| Lysine/ornithine decarboxylase [Brucella melitensis ATCC 23457] gi|256043023|ref|ZP_05445969.1| Lysine/ornithine decarboxylase [Brucella melitensis bv. 1 str. Rev.1] gi|256111987|ref|ZP_05452938.1| Lysine/ornithine decarboxylase [Brucella melitensis bv. 3 str. Ether] gi|256262911|ref|ZP_05465443.1| orn/DAP/Arg decarboxylase [Brucella melitensis bv. 2 str. 63/9] gi|260564257|ref|ZP_05834742.1| orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis bv. 1 str. 16M] gi|265989462|ref|ZP_06102019.1| orn/DAP/Arg decarboxylase 2 [Brucella melitensis bv. 1 str. Rev.1] gi|265993438|ref|ZP_06105995.1| orn/DAP/Arg decarboxylase 2 [Brucella melitensis bv. 3 str. Ether] gi|17985359|gb|AAL54375.1| ornithine decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|225642069|gb|ACO01982.1| Lysine/ornithine decarboxylase [Brucella melitensis ATCC 23457] gi|260151900|gb|EEW86993.1| orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis bv. 1 str. 16M] gi|262764308|gb|EEZ10340.1| orn/DAP/Arg decarboxylase 2 [Brucella melitensis bv. 3 str. Ether] gi|263000131|gb|EEZ12821.1| orn/DAP/Arg decarboxylase 2 [Brucella melitensis bv. 1 str. Rev.1] gi|263092749|gb|EEZ16958.1| orn/DAP/Arg decarboxylase [Brucella melitensis bv. 2 str. 63/9] gi|326410285|gb|ADZ67349.1| Lysine/ornithine decarboxylase [Brucella melitensis M28] gi|326553578|gb|ADZ88217.1| Lysine/ornithine decarboxylase [Brucella melitensis M5-90] Length = 377 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 112/357 (31%), Gaps = 29/357 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ A+K A + L ++S+ E+ Sbjct: 18 PCLVVDTDVVRENYQGFEKALPYS--RIFYAVKANPAPEILRLLASLGSSFDTASVAEIE 75 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E + +Y + A + V ++ K A ++ R Sbjct: 76 MALEAGATPDRISYGNTIKKERDIARAFDLGIRLYAVDCVEEVEKIARVA--PGSRVFCR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +K+ L+ + + + ++ + G+ FH + + L + Sbjct: 134 VLTDGEGAKWPLSRKFGCVPAMAKDVLRRAKALGLDAYGVSFHVGSQQTDLTAWDRALAD 193 Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 F + +++GGG L + +E Sbjct: 194 AAAVFRTLADEGIILRMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSRHFGNRIPETIIE 253 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V N + T V+ +S N + ++ + + + YQ T + Sbjct: 254 PGRGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRYQ-IVTPHDG 312 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD I E Y FNG Sbjct: 313 SETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAVAFNGF 369 >gi|110635049|ref|YP_675257.1| ornithine decarboxylase [Mesorhizobium sp. BNC1] gi|110286033|gb|ABG64092.1| ornithine decarboxylase [Chelativorans sp. BNC1] Length = 377 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 111/357 (31%), Gaps = 29/357 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N ++ A+K A + L ++S+ E+ Sbjct: 18 PCLVVDLDVVRDNYLAFERAL--PDSRIYYAVKANPAPQILRLLTSLGSSFDTASVAEIE 75 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + +Y + A ++ ++ K A K+ R Sbjct: 76 MALDAGATPDRISYGNTIKKERDIARAFALGIRLFAVDSTEEVEKISRAA--PGSKVFCR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + +++ L+ + + + G+ FH + + L + Sbjct: 134 VLTDGAGAEWPLSRKFGCVPAMAVDVLRRAKQLGLEPYGVSFHVGSQQTDLSAWDRALSD 193 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 F + +++GGG + L++ + +E Sbjct: 194 ARMVFAALADEGIVLRMVNMGGGFPTRYLRDVPEAQAYGQAIFSSLRKHFGNRIPETIIE 253 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V N + + V+ IS+ N + ++ + + + Y + Sbjct: 254 PGRGMVGNAGVIKSEVVLISKKADNDNVRWVYLDIGKFGGLAETMDEAIRYPLVTRHDGS 313 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 ++ G +C + D+ E + + IGD + E Y + FNG Sbjct: 314 ETT-PCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEVLIEGTGAYTTTYASVAFNGF 369 >gi|254433551|ref|ZP_05047059.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus oceani AFC27] gi|207089884|gb|EDZ67155.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus oceani AFC27] Length = 401 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 47/375 (12%), Positives = 108/375 (28%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y +++ + + + + + ALK + + +DG +SL E+ Sbjct: 28 TPFYAYERRLISERIQHLRTHLP-SEIYIHYALKANPMPALAGHIAPLVDGLDVASLGEL 86 Query: 64 MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + E+ ++ D E+ A L+ TI + ++ + A+K ++ + Sbjct: 87 RVALDTGTPPESISFAGPGKSDAELAASLAAGITINMESEGEMERIAHLAEKQGRRPRVA 146 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171 + + + K G + I + + G + +N Sbjct: 147 VRVNPNFELKTSGMKMAGGPKPFGVDAERVPAMLARINTLDLDFQGFHIFSGSQNLRAEA 206 Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF---------CQRLKEF 221 + T + +++GGG K Sbjct: 207 IIEAQERTFTLALELARSAPTPVRLLNIGGGFGIPYFPGNKPLDLRPIADNLAASLPKLQ 266 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272 + ++ LE G +V ++D + ++ ++ + H Sbjct: 267 RQIPEAEVTLELGRYLVGEAGIYVCEIIDRKISRGHVFLITNGGLHHHLAASGNFGQVIR 326 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + A V G C D+ + + GD I Y + Sbjct: 327 KNYPVVVGNRIQGSTREIASVVGPLCTPLDLLADRMELAQAEAGDLIVVFQSGAYGRSAS 386 Query: 332 N-WFNGINMPTIAVK 345 F +P + Sbjct: 387 PLGFLSHPVPAEVLV 401 >gi|77165424|ref|YP_343949.1| Orn/DAP/Arg decarboxylase 2 [Nitrosococcus oceani ATCC 19707] gi|76883738|gb|ABA58419.1| Orn/DAP/Arg decarboxylase 2 [Nitrosococcus oceani ATCC 19707] Length = 410 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 47/375 (12%), Positives = 108/375 (28%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y +++ + + + + + ALK + + +DG +SL E+ Sbjct: 37 TPFYAYERRLISERIQHLRTHLP-SEIYIHYALKANPMPALAGHIAPLVDGLDVASLGEL 95 Query: 64 MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + E+ ++ D E+ A L+ TI + ++ + A+K ++ + Sbjct: 96 RVALDTGTPPESISFAGPGKSDAELAASLAAGITINMESEGEMERIAHLAEKQGRRPRVA 155 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171 + + + K G + I + + G + +N Sbjct: 156 VRVNPNFELKTSGMKMAGGPKPFGVDAERVPAMLARINTLDLDFQGFHIFSGSQNLRAEA 215 Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF---------CQRLKEF 221 + T + +++GGG K Sbjct: 216 IIEAQERTFTLALELARSAPTPVRLLNIGGGFGIPYFPGNKPLDLRPIADNLAASLPKLQ 275 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272 + ++ LE G +V ++D + ++ ++ + H Sbjct: 276 RQIPEAEVTLELGRYLVGEAGIYVCEIIDRKISRGHVFLITNGGLHHHLAASGNFGQVIR 335 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + A V G C D+ + + GD I Y + Sbjct: 336 KNYPVVVGNRIQGSTREIASVVGPLCTPLDLLADRMELAQAEAGDLIVVFQSGAYGRSAS 395 Query: 332 N-WFNGINMPTIAVK 345 F +P + Sbjct: 396 PLGFLSHPVPAEVLV 410 >gi|209151020|gb|ACI33056.1| Ornithine decarboxylase 1 [Salmo salar] Length = 455 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 108/371 (29%), Gaps = 34/371 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L + R V A+KC + + TL G +S E+ + Sbjct: 37 FYVCDLGDVLK--KHMRWARAMPRVTPFYAVKCNDSRAVVTTLASLNAGFDCASKTEIQI 94 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K S + S + K K+ LRI Sbjct: 95 VQSLGVDANRIIYANPCKQVSQIKYASAHGVQMMTFDSDVELMKVARYHDDAKLVLRIAT 154 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH +S + + Sbjct: 155 DDSKAVCRLSVKFGATLKACRGLLERAKELGLDVIGVSFHVGSGCTDPDTYSQAISDARC 214 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F ++I EPG Sbjct: 215 VFDMGAEVGFNMTLLDIGGGFPGSEDTKLKFEEITAVINPALDKYFPADSGIRIIAEPGR 274 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYL-----------LYQESA 279 V + TL ++ + D + + Sbjct: 275 YYVASAYTLAVNIIAKKVIMNEQSASDEDDDWTSDRTLMYYVNDGVYGSFNCILYDHAHP 334 Query: 280 TIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + P Y + G +C D E +++G+ + FE++ Y + + Sbjct: 335 LPTLHKKPKPDERMYPCSIWGPTCDGLDRIAEVCTLPDMQVGEWLLFENMGAYTVAASST 394 Query: 334 FNGINMPTIAV 344 FNG P I Sbjct: 395 FNGFQKPDIYY 405 >gi|149374378|ref|ZP_01892152.1| putative diaminopimelate decarboxylase protein [Marinobacter algicola DG893] gi|149361081|gb|EDM49531.1| putative diaminopimelate decarboxylase protein [Marinobacter algicola DG893] Length = 398 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 50/375 (13%), Positives = 102/375 (27%), Gaps = 35/375 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D +L N + G ++ A K A + L ++ G +S E+ Sbjct: 25 AYVYDLPELRNRAQNIVGCLP-PGCEMFYAAKANPALPVLSALASFVHGFEVASGGELDW 83 Query: 66 GHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 F + + K A+ N + I ++ +L + D A + + + Sbjct: 84 VRRHFPDTSVIFGGPGKLASDLEKAIDQNVELIHVESLLELQRLCDIAGRRQANQDILLR 143 Query: 124 PSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN----K 170 ++ + + + + + G FH + Sbjct: 144 INLELADTPSTRLTMGGVPTPFGMEEACIPDALALLARQGRVRLRGFHFHLMSHQLDEKR 203 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224 L+ + + + I++GGGI + ++ Sbjct: 204 HLTLIKHYLETVRTWEAQYGLSLTEINVGGGIGINYTQPDQQFDWSGFCTGLDELLQAYV 263 Query: 225 -YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI-- 281 + +I E G I VLD+ + V H + Sbjct: 264 DRAWRIRFECGRFITAPCGYYVGEVLDVKRCGEEWFAVCRGGTHHFRTPAAQAHNHPFDI 323 Query: 282 ---------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 P ++ + G+ C D+F + +GD + F Y N + Sbjct: 324 LPTNNTDAATPCVTDHSVTLVGQLCTPKDVFARQVHIASLGVGDLVVFRYAGAYAWNISH 383 Query: 333 W-FNGINMPTIAVKN 346 F P Sbjct: 384 QAFLMHPHPEEYFIE 398 >gi|226943361|ref|YP_002798434.1| Ornithine decarboxylase [Azotobacter vinelandii DJ] gi|226718288|gb|ACO77459.1| Ornithine decarboxylase [Azotobacter vinelandii DJ] Length = 387 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 116/361 (32%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + + N + ++ A+K A + L +S YE Sbjct: 25 ETPFVVIDTEIIANAYEELGDCF--PFARIYYAVKANPAVEIIRLLRDKGSNFDIASRYE 82 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E G E +Y K + ++ + L A + Sbjct: 83 LDKVMAEGVGPERVSYGNTIKKAKDIRYFYEKGVRLFATDSEADLRNIAKAAPGSKVYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + S + + I + + GL FH + + + A Sbjct: 143 ILTEGTASA---DWPLSRKFGCQPDMALDLMILARQLGLVPYGLSFHVGSQQRDIDVWDA 199 Query: 178 MLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227 ++ ++ F +++ I++GGG ++ + LKE + Sbjct: 200 VIAKVKVIFERLKQEDGIELKMINMGGGFPANYITKTNSLQTYAEEIIRFLKEDFGEELP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG +++ N L + V+ +S + + + + Sbjct: 260 EIILEPGRSLIANAGILVSEVVLVSRKSRTAVERWVYTDVGKFSGLIETMDEAIKYPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI E + + GDR+ + Y + FNG Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLASGDRLYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|330981825|gb|EGH79928.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 402 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 58/385 (15%), Positives = 123/385 (31%), Gaps = 35/385 (9%) Query: 2 IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 ++T P ++ D L ++ + AGV+L A+K + M +T+ + G S Sbjct: 18 LETDPLAAFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETIAPLVSGFEIS 76 Query: 59 SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 S E+ + + ++ D ++ + L N I +++++ + + A++ + Sbjct: 77 SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGR 136 Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + L E + + + G H Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLMLKGFHVHAMS 196 Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218 S +L + + + Q+ ++GGGI + + + C+ L Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALARDPGQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256 Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275 ++ + L EPG I VLD + +V Sbjct: 257 EKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQS 316 Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + I+ T P + + G+ C D+ K V IGD + Y Sbjct: 317 HDHPVIHLPTAPQSTESSEQAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGY 376 Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352 N + F P+ ++ Sbjct: 377 NISHADFLCHPRPSQHFVRNGERVR 401 >gi|169601550|ref|XP_001794197.1| hypothetical protein SNOG_03643 [Phaeosphaeria nodorum SN15] gi|5921568|emb|CAB56523.1| ornithine decarboxylase [Phaeosphaeria nodorum] gi|160705959|gb|EAT88848.2| hypothetical protein SNOG_03643 [Phaeosphaeria nodorum SN15] Length = 445 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 102/361 (28%), Gaps = 31/361 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ VK A+KC + +++ G +S E+ Sbjct: 66 FFIADLGEVYRQHLRWKKNLAR--VKPHYAVKCNPDTQVLRLMSELGMGFDCASKNEIET 123 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K +N + +K K ++ LRI Sbjct: 124 VLKLGVDPARIIYAQPCKTKSYVRYAANSGVKQMTFDNADELYKTKQLFPDAELYLRILT 183 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + + NV G+ FH F +++ Sbjct: 184 DDSGSLCRLSQKFGASLDTTAELLELAHKLELNVVGVAFHVGSGASDPKAFIKAVQDARF 243 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F F + + +GGG P+ + +++ EPG V+ Sbjct: 244 VFDQAAAFGFDMHTLDVGGGFTGDITFEPMAAVLSASLDEYFPPHIRVIGEPGRYYVSTA 303 Query: 242 TTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL---------LYQE 277 T+ V+ + N S + H LY Sbjct: 304 FTIACHVIARRTVADATLGTTSYMLYLNDGVYGNFSSIIFDHQHPVPRVLKSGNDVLYDV 363 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336 + Y + G +C DI + +GD + FED+ Y FNG Sbjct: 364 RTSGYDTPSQVEYSIWGPTCDGIDIISSSCSFPELLDVGDWLYFEDMGAYTKCSATKFNG 423 Query: 337 I 337 Sbjct: 424 F 424 >gi|255658079|ref|ZP_05403488.1| lysine/ornithine decarboxylase [Mitsuokella multacida DSM 20544] gi|260849844|gb|EEX69851.1| lysine/ornithine decarboxylase [Mitsuokella multacida DSM 20544] Length = 399 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 107/370 (28%), Gaps = 23/370 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+ ++ K+ N AG + A+K + L +S E Sbjct: 19 PTPFLVLSVDKVAENYAFLRKHLPRAG--IYYAIKANPHPRALERLAALGSHFDVASAGE 76 Query: 63 V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + ML G Y D A F+ S++ K A + Sbjct: 77 MEMLHAAGVDGSRMIYANPVHDARGFAAASRFGVKRFTFDDESEIPKLAAAAPGADVLVR 136 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 ++++ S + S L K E + G+ FH ++ S + L Sbjct: 137 VQVHNSKALVDLNTKFGAPLGSALP--LLRKAEQAGLHAKGICFHVGSQSLSTAAYEEAL 194 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQI--YL 231 + F + + +GGG + + + E+ Q + Sbjct: 195 LLVHHLFLEAEASGMHLTDLDIGGGFPIPSAEGLHVDLAAMLEAINRQLERLFPQTAVWT 254 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTG 286 EPG + L T+V+ + + + D+ Y + N Sbjct: 255 EPGRFLCGTAMNLVTSVIGTKQRGTFPWYILDEGIYGVFSGILFDHWTYPLH--CFGNGA 312 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ G SC D+ + IG + D+ Y FNG P + Sbjct: 313 KTPSVFAGPSCDGIDVLYRDFPAPKLPIGANVLVSDIGAYTTVSATRFNGFE-PAAVLVW 371 Query: 347 VDGTIKAIRE 356 D + Sbjct: 372 EDQADLVAKR 381 >gi|194671181|ref|XP_001256848.2| PREDICTED: ornithine decarboxylase-like, partial [Bos taurus] Length = 420 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 66/382 (17%), Positives = 116/382 (30%), Gaps = 36/382 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G +S E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K +N + S++ K K+ LRI Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELDIDVIGVSFHVGSGCTDPETFVQAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVL-------------------DISENIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ D + V S + D+ + Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEEESTDRTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 277 -----ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 P+ Y++ + G +C D E GD + FE++ Y + Sbjct: 338 PLLQKYLPNTQPDEKYYSSSIWGPTCDGLDRIDERCNLLRCMWGDWMLFENMGAYTVAAA 397 Query: 332 NWFNGINMPTIAVKNVDGTIKA 353 + FNG PTI T Sbjct: 398 STFNGFQRPTIYYVMSGPTWLV 419 >gi|91790607|ref|YP_551559.1| Orn/DAP/Arg decarboxylase 2 [Polaromonas sp. JS666] gi|91699832|gb|ABE46661.1| Orn/DAP/Arg decarboxylase 2 [Polaromonas sp. JS666] Length = 408 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 59/375 (15%), Positives = 111/375 (29%), Gaps = 36/375 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D + L + + AG +L A+K + + TL + G SS E+ Sbjct: 25 AYVYDLEALRRHSQAVVAALP-AGCELFYAIKANSDLPILRTLAPRVAGFEVSSGGELAW 83 Query: 66 GHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--KIGLR 121 E F ++ K + + D I ++ +L + A+ + + LR Sbjct: 84 VREHFPSTPLIFSGPGKTDAELRLALDSDVEAIHVESLHELRRLAWLAEAAGRTAPVLLR 143 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK---- 170 +N + + G E+ + G FH Sbjct: 144 VNLPLPGLAATTLMMGGKATPFGIAVDQLPACLASLREAPGLRLRGFHFHLLSHQLDAAA 203 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS---- 226 +A L+ +E+ G + I+ +++GGGI + + ++ Sbjct: 204 HVELIAAYLEQVERWCGAYGLDIDHVNVGGGIGVNYRQPQQQFDLAAFGAGLQRLRASRP 263 Query: 227 --VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL----------- 273 ++ E G I VLD+ +V H Sbjct: 264 GLPRLRFECGRYITAACGYYAMQVLDLKHTFGRDYVVARGGTHHFRTPYAQGHSHPFHVL 323 Query: 274 --LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + P T V G+ C D+ + V++GD + F Y + Sbjct: 324 PVEHWPYPWARPELRDATVHVVGQLCTPKDLLAFDAPVERVRVGDLLVFPYAGAYAWHIS 383 Query: 332 NW-FNGINMPTIAVK 345 + F P Sbjct: 384 HHDFLRHPHPQHWYL 398 >gi|290960696|ref|YP_003491878.1| pyridoxal-dependent decarboxylase [Streptomyces scabiei 87.22] gi|260650222|emb|CBG73338.1| putative pyridoxal-dependent decarboxylase [Streptomyces scabiei 87.22] Length = 541 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 54/399 (13%), Positives = 106/399 (26%), Gaps = 46/399 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ D ++ L+ ++ +LK + + L + +S E Sbjct: 25 GSPLYVYDLARVRTALEDLRAALPQP-SRVYYSLKANSHPDLVAELRRGGARAEVTSRGE 83 Query: 63 VMLGHEKFGG--ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118 + E E E +A+ + T + L++ A Sbjct: 84 LAAALEAGHPAAELMYSGPGKVPAELDEAIAAGMRTFSAESFGDLDRIGAAADAHGVTAD 143 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 + + S+ G D + + + G+ F + Sbjct: 144 CVLRINAAGAPGEGGLRMTGGPSQFGFDLDDLTAHGARLLVKGVRIIGMHFFPLTNARDE 203 Query: 173 LCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224 A L + + + LGGG + L ++ Sbjct: 204 DGLLAELAQSVRTAASLRDELGIPLHLLDLGGGFAAPYATPGERPAYPGLRSALSAVLDE 263 Query: 225 YSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-------- 269 E G +V + L +TV D+ + N V + H+ Sbjct: 264 SLPGWRDGEPVVAFESGRYLVGDCGRLVSTVTDVKNSRGNTYAVLDAGINHLGGLSGLGR 323 Query: 270 ------PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + + P + G C DI ++ GD ++F +V Sbjct: 324 LLPLSARPLSGPGPATDEVGDREPAFVTLAGPLCTPADILARAADLPGLRPGDLLAFPNV 383 Query: 324 AGYNINRK-NWFNGINMPTIAVKNVD-----GTIKAIRE 356 Y ++ F G P V + G + R Sbjct: 384 GAYGLSASLLGFLGHPAPAELVVDGGETVSAGRLALRRH 422 >gi|146305836|ref|YP_001186301.1| ornithine decarboxylase [Pseudomonas mendocina ymp] gi|145574037|gb|ABP83569.1| ornithine decarboxylase [Pseudomonas mendocina ymp] Length = 387 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 117/361 (32%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID+Q + + D K+ A+K A + + L +S+YE Sbjct: 25 ETPFVVIDRQIISDAYDQLGNCF--PFAKIYYAVKANPAVEIIELLRDKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + G E +Y K ++ + L A + Sbjct: 83 LDKVMATGVGPERISYGNTIKKSRDIRYFFDKGVRLFATDSEADLRNIAKAAPGSKIYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + S S + + I ++ + G+ FH + + + A Sbjct: 143 ILTEGSTSA---DWPLSRKFGCQPDMALDLLILAKQLGLVPYGISFHVGSQQRDIDVWDA 199 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRL----KEFSEKYSV 227 + ++ F ++ I++GGG + ++ + + + KE Sbjct: 200 AIAKVKVIFERLREEDGITLQMINMGGGFPANYIQRTNDLETYAEEITRFLKEDFGDDLP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG +++ N L + V+ ++ + + + + Sbjct: 260 EIILEPGRSLIANAGVLVSEVVLVARKSRTAVERWVYADVGKFSGLIETMDESIKFPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI ++ + GDR+ + Y + FNG Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLASGDRLYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|332298614|ref|YP_004440536.1| Ornithine decarboxylase [Treponema brennaborense DSM 12168] gi|332181717|gb|AEE17405.1| Ornithine decarboxylase [Treponema brennaborense DSM 12168] Length = 390 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 51/373 (13%), Positives = 117/373 (31%), Gaps = 33/373 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP +++ + + N A + A+K A + +NQ +S Y Sbjct: 23 LETPCIVVNLRTIKKNYIKLQNSFPFAA--IYYAVKANPANEVISLVNQLGGNFDIASRY 80 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + +Y K + A ++ L A + Sbjct: 81 ELDQVLALGISPDRISYGNTIKKAKDIAYFYEKGVRMFATDSKEDLKNIAKYAPGSRIYV 140 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176 + + S + + ++S + G+ FH + + ++ Sbjct: 141 RILVENSATA---DWPLSRKFGCHPDMAYDLLVQSRDSGLTPYGISFHVGSQQRDIGQWN 197 Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSE----KYS 226 + + F ++ I++GGG + + ++ + + Sbjct: 198 DAIAKTKYLFTALEEEENIRLSMINMGGGFPASYVQPTNDLSEYASEITRYLHDDFGDNV 257 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATI 281 QI LEPG ++V ++ L + V+ IS + + + + + + Sbjct: 258 PQIILEPGRSLVGDSGILVSEVVLISRKNNTALYRWVYLDTGKFNGLIETLGESIKYPVL 317 Query: 282 YPNT----GPYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKNW- 333 ++ G +C + DI ++ +KIGDR+ Y + + Sbjct: 318 TEKDDPSAKEGEVILAGPTCDSMDIIYEDFKYKLPLDLKIGDRVYVLSAGAYTASYASVC 377 Query: 334 FNGINMPTIAVKN 346 FNG + Sbjct: 378 FNGFPPLKTYFMD 390 >gi|307130373|ref|YP_003882389.1| diaminopimelate decarboxylase [Dickeya dadantii 3937] gi|306527902|gb|ADM97832.1| Diaminopimelate decarboxylase [Dickeya dadantii 3937] Length = 411 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 50/375 (13%), Positives = 101/375 (26%), Gaps = 32/375 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D L ++ + GV+L A+K + + D + + G SS E+ Sbjct: 25 AFVYDLTALRQHVSEVMAALP-PGVELYYAIKANSEKPILDAIAPLVHGFEISSGGEIAR 83 Query: 66 GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + ++ A+ + + + ++ + + +A++ + I Sbjct: 84 VAGCGTRKPFVFSGPGKLDSDFDLALEQGVEAVHVESRHEIARLQQRARQHGVVQPVFIR 143 Query: 124 PSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + L + +D + + G H Sbjct: 144 VNPELASSLTSKLAMAGTPTPFGMDEADLADAVRDVDNASHLQLKGFHVHAMSHQMVVAR 203 Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225 +L + + I +++GGGI + + C L+ + Sbjct: 204 HQQLLDLYLTRWPQWKALSAHPQHITHLNVGGGIGVPYLTPERFDWPALCDYLRTRLAQQ 263 Query: 226 SVQIY--LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 EPG I VLD + +V + I+ Sbjct: 264 PDAPIVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVCRGGTHQFRLPVAQGHDHPVIH 323 Query: 283 -------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334 V G+ C D+ V IGD + Y N + F Sbjct: 324 LPLTSAPTTGETRDWTVVGQLCTPKDVLSRDQRLTDVNIGDLLVLPLAGAYGYNISHADF 383 Query: 335 NGINMPTIAVKNVDG 349 P DG Sbjct: 384 LCHPRPGQYFTTEDG 398 >gi|195551415|ref|XP_002076223.1| GD15360 [Drosophila simulans] gi|194201872|gb|EDX15448.1| GD15360 [Drosophila simulans] Length = 394 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 104/357 (29%), Gaps = 23/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + L + +K A+KC + L Q G +S EV L Sbjct: 33 LNICDLSSVERKLRLWQKLLPR--IKPFYAVKCNDDPMVVRLLAQLGAGFDCASKNEVKL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + ++ +K + + +R Sbjct: 91 VLGFDVSPERIIFANPCRPVSHLEYAKEHRVSNGTVDNEFEVYKLHTHYPNSNLIVRFKS 150 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + + + +S V G FH + +K + Sbjct: 151 EAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELEAYDRAIKKAK 210 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237 F ++++ +GGG +D K ++ VQI EPG Sbjct: 211 NLFKFGALLGYDMDFLDIGGGFPGSDDGKFEKIAESVNTSVQRHFPDERVQIIAEPGRFF 270 Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 V TL + E V S + D+ + + Sbjct: 271 VAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVTAEHYLDNAES 330 Query: 287 PY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 +++ G SC A D E + GD + F ++ Y + + FNG +P Sbjct: 331 LPHLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASPFNGFEVPK 387 >gi|257056451|ref|YP_003134283.1| ornithine decarboxylase [Saccharomonospora viridis DSM 43017] gi|256586323|gb|ACU97456.1| ornithine decarboxylase [Saccharomonospora viridis DSM 43017] Length = 389 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 107/360 (29%), Gaps = 30/360 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D +++ + A+K + L +S E Sbjct: 18 PTPCLVVDIDTVIDRYSRFTEAF--PDAHVQYAVKANPHPAVVRALVDAGAAFDVASPGE 75 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L E +T +Y K A F+ S L+ A + Sbjct: 76 IDLCVEAGARPDTLSYGNTIKKPSDIAHAHAAGVREYTFDARSDLDNIARHAPGAQVSVR 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 L + N+ + + + + + G+ FH + + Sbjct: 136 LLVEGGPDSVT---PFGNKFGCNTDDAVRMLLRAAESGLEPVGVSFHVGSQQLEPAAWDL 192 Query: 178 MLKNIEKEF---GHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYSVQI--- 229 + + K F + +++GGG D P+ + + + + Sbjct: 193 AVASAAKVFAGVAEHGVTLRRLNVGGGFGVDYIDTAPPMSAYADTILSAVRSHFPEPPEL 252 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--------VDSSVEAHVPDYLLYQESATI 281 EPG A+V + + V+ ++ + + + + Y+ Sbjct: 253 VCEPGRALVAEAGMIRSEVVVVARKHPTDEHRWVYLDIGRYNGLAETENEAIAYRLVPVG 312 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C D+ + + ++ GDRI Y + + FNGI Sbjct: 313 THSQEDGPVIIAGPTCDGDDVLYQRTPYRLPLSLEPGDRIDILASGAYTASYSSVAFNGI 372 >gi|206889745|ref|YP_002249553.1| ornithine decarboxylase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741683|gb|ACI20740.1| ornithine decarboxylase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 372 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 125/355 (35%), Gaps = 20/355 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 PY L+D++ L + KN+ K+ A+K + LN + G +S E+ Sbjct: 24 PYLLLDREILKEKISLIGRGIKNS--KVFYAVKANPDIDVIRYLNSFNVGFEIASEGELA 81 Query: 65 LGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + E + K + +AV + F++++++ K + + L Sbjct: 82 ILKQLNVEPERIITSNPVKTFKFLKEAVEYGIEYYAFDSIAEVEKLAKYTPRKKVYVRLT 141 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS--- 176 + S + E + I ++ + ++ G+ FH + + + Sbjct: 142 VPNEGSEWPLSKKF----GVEMEEAAQLLIYAKQRGLDPIGITFHVGSQCSNVYNWHTAI 197 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQ--IYLE 232 +++ +I+ +++GGG K ++ ++ E+Y I++E Sbjct: 198 HKAGQLKELVRKNGIEIKMLNIGGGYPIEYTKKVPSIETIETKINSILEEYFPDTEIFIE 257 Query: 233 PGEAIVTNTTTLNTTVLDISEN--IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290 PG A+V + + ++ ++ L I + + + Sbjct: 258 PGRAVVGDAGVFVSRIIGKAQRGDENWLYIDVGVFNGLMESIGGIKYQYIVGSRGEEKEW 317 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + G SC + D+ +G I Y I+ + FNG + P + Sbjct: 318 TIAGPSCDSFDVIDREVVLPEPDVGSLILILSAGAYTISYASEFNGFSTPKTFLI 372 >gi|56477868|ref|YP_159457.1| ornithine/diaminopimelate/arginine decarboxylase,family protein [Aromatoleum aromaticum EbN1] gi|56313911|emb|CAI08556.1| Ornithine/diaminopimelate/arginine decarboxylase, family 2 [Aromatoleum aromaticum EbN1] Length = 416 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 50/374 (13%), Positives = 102/374 (27%), Gaps = 34/374 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y D+ L + V+L A+K + + + +DG +S E+ Sbjct: 43 TPFYAYDRGLLTQRVSELRTALPRE-VRLHYAMKANPMPALVCHMAKLVDGIDVASAGEL 101 Query: 64 MLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + GE +D E+ ++ + + ++ + L + Sbjct: 102 KVALDAGADPGEISFAGPGKQDAELQQSVAAGILVNLESFREIAPLVAASVALGLPARVA 161 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK---- 170 + + K + G + I G +N Sbjct: 162 VRVNPDFELKSSGMKMGGGPKQFGVDAEQVPQLLAEIGRAGLAFEGFHLFAGSQNLKAEA 221 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DFCQRLKEFS 222 + + H +++++LGGG + + + E + Sbjct: 222 IVEAQRKSFELALRLAEHAPAPVKFLNLGGGFGIPYFPGEQRLELAPIGDNLAALVAEAA 281 Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272 K Q+ +E G +V V+D + + +V H Sbjct: 282 RKLPQAQLVIELGRYLVGEAGIYVCRVIDKKVSRGHTYLVTDGGLHHHLSASGNFGQVIR 341 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + V G C D+ GE V+ GD + Y + Sbjct: 342 KNYPVAIGNRMGDAATENYSVVGPLCTPLDLLGEKINLPQVQPGDLVVIHQSGAYGASAS 401 Query: 332 -NWFNGINMPTIAV 344 F G + Sbjct: 402 PTGFLGHPEIIEIL 415 >gi|326504166|dbj|BAK02869.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 457 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 112/356 (31%), Gaps = 24/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ +D + + N ++ V A+KC + L G +S E+ Sbjct: 37 PFFAVDLEDICN--KHIRWLTSMPRVTPHYAIKCNDDINVIKLLAYLGAGFDCASKGEIK 94 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + Y K + ++ K K + K+ LR+ Sbjct: 95 KVMDLGVSADRIIYANPCKQSSYIRYAHEVGVDVMTFDNEQELLKIKQCHSNAKLVLRLV 154 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAMLK 180 S + + K DK + + G+ FH + F+ + Sbjct: 155 TDDSNAVCRFSMKFGADMNTARKLIDKAQELDMEIIGVSFHCGSGQMTSKAFVDAIQNAR 214 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEPG 234 I ++ + LGGG + F E +V+I EPG Sbjct: 215 MIMNYGNKLGFTMKLLDLGGGFPGNTGTEEYFAEIASAVNATIDEHFPENENVRIIAEPG 274 Query: 235 EAIVTNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 V + TL T V+ + V S + D+ + + Sbjct: 275 RYYVASAYTLATNVIASREMIDPETGAVKYMYYINDGVYGSFNCVLYDHYVPEPCLFDKN 334 Query: 284 NTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + YT+ + G +C D ++IGD I ++++ Y I+ FNG+ Sbjct: 335 KSNDSYTSSIWGPTCDGLDCIQTSIQLPKLEIGDWIYWKNMGAYTISAAVQFNGLP 390 >gi|225679753|gb|EEH18037.1| ornithine decarboxylase [Paracoccidioides brasiliensis Pb03] gi|226291506|gb|EEH46934.1| ornithine decarboxylase [Paracoccidioides brasiliensis Pb18] Length = 448 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 105/360 (29%), Gaps = 32/360 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + Q +G +S E+ Sbjct: 69 PFYVADLGQVYRQHIRWKKNLGR--VKPFYAVKCNPDPQILRLMVQLGNGFDCASKAEID 126 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + Y K S + +K K ++ LRI Sbjct: 127 YALDVGVDPSRIIYAQPCKTKSFLRYASQVGVKQMTFDNSDELYKIKEMCPDAELYLRIL 186 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + + NV G+ FH + F +++ Sbjct: 187 TDDSASLCRLSMKFGASLSVARSLLELAKELKLNVIGVSFHVGSGAEDPKSFVKAVEDSR 246 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L E+ + ++I EPG V + Sbjct: 247 FVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLSDALDEYFPPH-IRIIAEPGRYYVAS 305 Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278 TL V+ I N + + H Sbjct: 306 AFTLAANVIARRDVSLEMSDSDSTAGATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 + P + G +C D+ E + +G+ + FE++ Y FNG Sbjct: 366 ESRVC--APIEYSIWGPTCDGIDLICERIALPGALDVGNWLYFENMGAYTKCSATRFNGF 423 >gi|83773891|dbj|BAE64016.1| unnamed protein product [Aspergillus oryzae] Length = 449 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 119/369 (32%), Gaps = 31/369 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ + D +++ + L + A+KC + + L + G +S E+ Sbjct: 63 PFLVADTRRIFQQHERWLQCL--PNIAPFYAVKCNSNIRLLRYLARLGVGFDCASWGEMK 120 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + K + S F+ V +L K KD A + ++ LR Sbjct: 121 LVLNLGVDPSRIIFAHPCKAVSALQMASRSGVPRTTFDNVDELEKIKDNA--PNLRLLLR 178 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I + L + + K + V+G+ FH + F ++N Sbjct: 179 IFADDDTALVSLGNKFGAPLDTTKALLLKAKDLGLVVDGVSFHVGSGASNADTFVTAVQN 238 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + F + + +GGG ++ + + +++ + + EPG Sbjct: 239 AKHVFQQGKQLGFDMHVLDVGGGFQDSNFEPMALSLQRAIEKEFPPSTQVM-AEPGRYYA 297 Query: 239 TNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + T V L +++ I + + L QE+ + Sbjct: 298 RSFYTAACKVVARRKQIGQDKLSQSDMLYLNDGIYGCFMNAVAENEIYRPILFKQETTSS 357 Query: 282 YPNT-GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGIN- 338 G + V G +C D + VK+GD + FE++ Y FNG Sbjct: 358 TEREAGEHRYSVWGPTCDGLDCIAKEATMGCEVKVGDWVKFENMGAYTTATSTQFNGFPN 417 Query: 339 MPTIAVKNV 347 I + Sbjct: 418 RYDIIYVDD 426 >gi|330958646|gb|EGH58906.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 402 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 61/377 (16%), Positives = 122/377 (32%), Gaps = 32/377 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D L ++ + AGV+L A+K + M +TL + G SS E+ Sbjct: 25 AFIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83 Query: 66 GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--HKKIGLR 121 + + ++ D ++ + L N + +++++ + + A++ + + +R Sbjct: 84 VMACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEEAGRVQPVFIR 143 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLC 174 INP + ++ + G D ++ + G H S Sbjct: 144 INPQLPAAQSSKLAMAGTATPFGIDEADLADAVRLVDSATHLTLKGFHVHAMSHQMSVER 203 Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225 +L + + + Q+ ++GGGI + + C+ LK+ + Sbjct: 204 HEQLLDFYLQRWQAWKALARYPEQLTHFNVGGGIGVDYLNNPQFDWQRLCRYLKKRLGEQ 263 Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 L EPG I VLD + +V + ++ Sbjct: 264 PDAPILRFEPGRFISAYCGYYVIEVLDRKTSHGEHFLVCRGGTHQFRLPVAQGHDHPVVH 323 Query: 283 PNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334 + P T V G+ C D+ K V IGD + Y N + F Sbjct: 324 LPSVPPTAASPEKVYTVVGQLCTPKDVLSRRRPFKDVSIGDLLVLPMAGAYGYNISHADF 383 Query: 335 NGINMPTIAVKNVDGTI 351 P + Sbjct: 384 LCHPRPPQHFVRNGERV 400 >gi|254695245|ref|ZP_05157073.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 3 str. Tulya] gi|261215608|ref|ZP_05929889.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 3 str. Tulya] gi|260917215|gb|EEX84076.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 3 str. Tulya] Length = 377 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 112/357 (31%), Gaps = 29/357 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ A+K A + L ++S+ E+ Sbjct: 18 PCLVVDTDVVRENYQGFEKALPYS--RIFYAVKANPAPEILRLLASLGSSFDTASVAEIE 75 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E + +Y + A + V ++ K A ++ R Sbjct: 76 MALEAGATPDRISYGNTIKKERDIARAFDLGIRLYAVDCVEEVEKIARVA--PGSRVFCR 133 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + + + ++ + G+ FH + + L + Sbjct: 134 VLTDGEGAEWPLSRKFGCVPAMAKDVLRRAKALGLDAYGVSFHVGSQQTDLTAWDRALAD 193 Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 F + +++GGG L + +E Sbjct: 194 AAAVFRTLADEGIILCMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSRHFGNRIPETIIE 253 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V N + T V+ +S N + ++ + + + YQ T + Sbjct: 254 PGRGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRYQ-IVTPHDG 312 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD I E Y FNG Sbjct: 313 SETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAVAFNGF 369 >gi|298487275|ref|ZP_07005324.1| pyridoxal-dependent decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158299|gb|EFH99370.1| pyridoxal-dependent decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 402 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 60/385 (15%), Positives = 121/385 (31%), Gaps = 35/385 (9%) Query: 2 IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 ++T P ++ D L ++ + AGV+L A+K + M +TL + G S Sbjct: 18 LETDPLAAFVYDLDALQQHVTDVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76 Query: 59 SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 S E+ + + ++ D ++ + L N I +++++ + + A++ + Sbjct: 77 SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAEETGR 136 Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + L E + + + G H Sbjct: 137 VQPVFLRINPQLPAAQSSKLAMAGTATPFGIDETDLAEAIRRLDGASHLTLKGFHVHAMS 196 Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218 S +L + + + Q+ ++GGGI + + + C+ L Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256 Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275 ++ + L EPG I VLD + +V Sbjct: 257 EKRLGEQRDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQG 316 Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + I+ P T V G+ C D+ K V IGD + Y Sbjct: 317 HDHPVIHVPCAPATGASEEQAYTVVGQLCTPKDVLSRQQPLKGVNIGDLLVLPLAGAYGY 376 Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352 N + F P ++ Sbjct: 377 NISHVDFLCHPRPIQHFVRNGERVR 401 >gi|330942902|gb|EGH45399.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 402 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 58/385 (15%), Positives = 122/385 (31%), Gaps = 35/385 (9%) Query: 2 IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 ++T P ++ D L ++ + AGV+L A+K + M +TL + G S Sbjct: 18 LETDPLAAFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76 Query: 59 SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 S E+ + + ++ D ++ + L N I +++++ + + A++ + Sbjct: 77 SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGR 136 Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + L E + + + G H Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLMLKGFHVHAMS 196 Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218 S +L + + + Q+ ++GGGI + + + C+ L Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALARDPGQLTHFNVGGGIGVDYLNSQQFDGQRLCRYL 256 Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275 ++ + L EPG I VLD + +V Sbjct: 257 EKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQS 316 Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + I+ P + + G+ C D+ K V IGD + Y Sbjct: 317 HDHPVIHLPNAPQSTESSEQAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGY 376 Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352 N + F P+ ++ Sbjct: 377 NISHADFLCHPRPSQHFVRNGERVR 401 >gi|260768554|ref|ZP_05877488.1| ornithine decarboxylase/arginine decarboxylase [Vibrio furnissii CIP 102972] gi|260616584|gb|EEX41769.1| ornithine decarboxylase/arginine decarboxylase [Vibrio furnissii CIP 102972] gi|315180265|gb|ADT87179.1| Diaminopimelate decarboxylase [Vibrio furnissii NCTC 11218] Length = 399 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 61/357 (17%), Positives = 106/357 (29%), Gaps = 17/357 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P L+D + V L ALK + TL Q ++ EV Sbjct: 36 PLLLLDCDIVRQQYRALSAAL--PNVTLHFALKPLPHPVVVRTLLQEGASFDLATTGEVE 93 Query: 65 L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L E E + K +F + K KA + ++ +R++ Sbjct: 94 LVAQEGVPAERTIHTHPIKRDADIRDALAYGCNVFVVDNLNELAKFKAYRDEVELLVRLS 153 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSAML 179 S + L+ + + + GL FH + K Sbjct: 154 FRNSEAFADLSKKFGCSPEQAVNIIEMAKEWNIRIKGLSFHVGSQTTNPQKYVEAIRTCK 213 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSV--QIYLEPGE 235 +E+ + + + +GGG + P+ FC + E + Q+ EPG Sbjct: 214 GVMEEVVARGLPALSTLDIGGGFPVNYTKQVMPIDQFCLPINEALAELPETVQVIAEPGR 273 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290 IV +V+ +E + S + D Y T+ + Sbjct: 274 FIVAQCMMSVASVMGQAERDGQMWYYLDDGVYGSFSGLIFDDAQYPL-VTLKQEGERVPS 332 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 ++ G +C + D+ E + GD I + Y FN V N Sbjct: 333 VLAGPTCDSIDVIAEDILLPKLDNGDLIVGRMMGAYTSATATDFNFFKRAQTVVFNE 389 >gi|295668118|ref|XP_002794608.1| ornithine decarboxylase [Paracoccidioides brasiliensis Pb01] gi|226286024|gb|EEH41590.1| ornithine decarboxylase [Paracoccidioides brasiliensis Pb01] Length = 448 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 105/360 (29%), Gaps = 32/360 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + Q +G +S E+ Sbjct: 69 PFYVADLGQVYRQHIRWKKNLGR--VKPFYAVKCNPDPQILRLMVQLGNGFDCASKAEID 126 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + Y K S + +K K ++ LRI Sbjct: 127 YALDVGVDPSRIIYAQPCKTKSFLRYASQVGVKQMTFDNSDELYKIKEMCPDAELYLRIL 186 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + + NV G+ FH + F +++ Sbjct: 187 TDDSASLCRLSMKFGASLSVARSLLELAKELKLNVIGVSFHVGSGAEDPKSFVKAVEDSR 246 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L E+ + ++I EPG V + Sbjct: 247 FVFDQAAEVGFDLKVLDVGGGFSEDTFERFASTLSDALDEYFPPH-IRIIAEPGRYYVAS 305 Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278 TL V+ I N + + H Sbjct: 306 AFTLAVNVIARRDVSLEMSDSDSTAGATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 + P + G +C D+ E + +G+ + FE++ Y FNG Sbjct: 366 ESRVC--APIEYSIWGPTCDGIDLICERIALPGALDVGNWLYFENMGAYTKCSATRFNGF 423 >gi|242808433|ref|XP_002485161.1| ornithine decarboxylase [Talaromyces stipitatus ATCC 10500] gi|218715786|gb|EED15208.1| ornithine decarboxylase [Talaromyces stipitatus ATCC 10500] Length = 475 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 58/384 (15%), Positives = 104/384 (27%), Gaps = 57/384 (14%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + VK A+KC + + Q +G +S E+ L Sbjct: 78 FYVADMGEVYR--QHMRWKLNLGRVKPFYAVKCNPDPEVLRLMAQLGNGFDCASKTEIDL 135 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K + +K K ++ LRI Sbjct: 136 ALKTGIDPSRIIYAQPCKTRSYLRYARQKGVKQMTFDNADELYKIKNDFPDAELYLRILT 195 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ D + NV G+ FH + F ++ Sbjct: 196 DDSTSLCRLSMKFGASLDTARPLLDLAKKLELNVVGVSFHVGSGAEDPGAFLKAAQDARW 255 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIV 238 F ++ + +GGG D + F L + + I EPG V Sbjct: 256 VFDQAAEVGYELHTLDVGGGF----CDETFEKFAAILSKAVDDLFPPNIRIIAEPGRYYV 311 Query: 239 TNTTTLNTTVLD-----------------------------ISENIKNLVIVDSSVEAHV 269 TL V+ I ++ + + + + Sbjct: 312 AAAFTLAANVIARRDVLDPQASSGSYMIYLNDGVYGNFSNIIFDHQHPVAQILTCANGSI 371 Query: 270 PD--------------YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KI 314 P + + + G +C D+ + + + Sbjct: 372 PPTPGLTASGSSTPGSATPCSADGSPCASPAGIEYSIWGPTCDGIDVISQRIVLPGLVDV 431 Query: 315 GDRISFEDVAGYNINRKNWFNGIN 338 GD + FED+ Y FNG Sbjct: 432 GDWLYFEDMGAYTRCSATRFNGFP 455 >gi|167383073|ref|XP_001736394.1| ornithine decarboxylase [Entamoeba dispar SAW760] gi|165901251|gb|EDR27353.1| ornithine decarboxylase, putative [Entamoeba dispar SAW760] Length = 413 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 115/352 (32%), Gaps = 25/352 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D + ++ V+ A+KC + L G +SL E+ Sbjct: 28 FWIFDTKGAEKAVERWKK--NMPTVRPCFAVKCNPEPHLVKLLGNLGCGFDCASLNEIKE 85 Query: 66 GHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + F E Y+ +K +A I +++ ++ K A ++ I + Sbjct: 86 VLDLGFSPEDITYSQTFKPYNQLIEASHLGIRHTIVDSIDEVQKIAKYAPEMGVMIRIM- 144 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC---ENKSFLCFSAML 179 S + + K+ I+ + N++G+ FH ++ F Sbjct: 145 ENDTSAGHVFGEKFGLHDNEVEIVLKE-IKDKGLNLDGVHFHVGSDSHNSQIFTKALTKA 203 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-RLKEFSEKYSVQIYLEPGEAIV 238 +N+ F + I +GGG + +KE + EPG + Sbjct: 204 RNVVTLAEQFGMKPYLIDIGGGFSQIAPFEEFATTIEKTIKELEFPEGTRFIAEPGRYLA 263 Query: 239 TNTTTLNTTV----LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN--------TG 286 +N L ++ + I K + ++ E I T Sbjct: 264 SNVFHLVCSLHGKRVRIHNEKKQIEYTSGDGLHGSFGCCIWFEKQKICECVTQIINENTK 323 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIG-DRISFEDVAGYNINRKNWFNGI 337 Y +++ G SC D ++ G D + F ++ Y I+ FNG Sbjct: 324 MYESIIYGPSCNGSDKVA-IQDLPEMEPGKDWLLFPNMGAYTISMATNFNGF 374 >gi|308503917|ref|XP_003114142.1| CRE-ODC-1 protein [Caenorhabditis remanei] gi|308261527|gb|EFP05480.1| CRE-ODC-1 protein [Caenorhabditis remanei] Length = 426 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 110/363 (30%), Gaps = 30/363 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + L+D K++ + + ++ A+KC + L G +S E+ + Sbjct: 44 FMLVDLDKIIERFELWKR--ELPMIEPFYAVKCNTDLVLIRILASLGCGFDCASREEIDI 101 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K D + + K + ++ LRI Sbjct: 102 VMGTGVSADRLIYANPCKTRSFITHAMERDVRMMTFDNSEELLKIARLHPNAEMILRIAV 161 Query: 125 SVSYSKFILADPNRPFSRL-GEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S + L L G + E NV G+ FH + L++ + Sbjct: 162 SDPTATCPLNLKFGADPVLAGPQLLKLASEEGVNVVGISFHVGSGCNDASAYRNALQHAK 221 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI----YLEPGEA 236 +++ I +GGG + P + + +++ +++ + EPG Sbjct: 222 NLCEIGEGLGFKMDIIDMGGGFPGAEHHNPFEKIAETIRDALDEFFPETEKRLIAEPGRF 281 Query: 237 IVTNTTTLNTTVL------------------DISENIKNLVIVDSSVEAHVPD-YLLYQE 277 +L ++ D V S + D Sbjct: 282 FAAGPFSLCANIIHATEVPATKITKDPKDCADHGYMYYINDGVYGSFNCIMFDHAHPVGA 341 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 Y + + G +C + D+ + ++IG+ + + D+ Y + FNG Sbjct: 342 PLFDVGRNEKYISTIWGPTCDSLDLVEDKKLMAKMEIGEWLYYPDMGAYTLAAGTTFNGF 401 Query: 338 NMP 340 P Sbjct: 402 AKP 404 >gi|260460667|ref|ZP_05808918.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075] gi|259033772|gb|EEW35032.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075] Length = 377 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 106/362 (29%), Gaps = 34/362 (9%) Query: 3 KT-PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 T P ++D + +N ++ A+K A + L ++S+ Sbjct: 15 PTGPCLVVDLDVVRDNFRAFEKAL--PDSRIYYAVKANPAPEILRLLAAMGSSFDTASVA 72 Query: 62 EVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 EV + + ++ + A + V ++ K A Sbjct: 73 EVEMAMDAGAPADRISFGNTIKKERDIARAYQLGIRLFAVDCVEEVEKVARVAPGSRVFC 132 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176 + + + + ++ ++ G+ FH + + Sbjct: 133 RVLTDGEGAEW----PLSRKFGCVPAMAVDVLRHAKGLGLDAYGVSFHVGSQQTDLTAWD 188 Query: 177 AMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSV 227 L++ + F ++ +++GGG L++ Sbjct: 189 RALRDAKTVFATLAEEGIVLKMVNMGGGFPTRYLRDVPAAQAYGQAIFSALRKHFGNAIP 248 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESA 279 + +EPG +V N + + V+ IS+ N + + + + + Y Sbjct: 249 ETIIEPGRGMVGNAGVIKSEVVLISKKADNDNVRWVFLDIGKFGGLAETMDEAIRYPIVT 308 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FN 335 ++ G +C + D+ E + + IGD + E Y FN Sbjct: 309 RHDGTETA-PCVLAGPTCDSADVMYEKTPYPLPLSLTIGDEVLIEGTGAYTTTYSAVAFN 367 Query: 336 GI 337 G Sbjct: 368 GF 369 >gi|303321193|ref|XP_003070591.1| ornithine decarboxylase [Coccidioides posadasii C735 delta SOWgp] gi|240110287|gb|EER28446.1| ornithine decarboxylase [Coccidioides posadasii C735 delta SOWgp] Length = 445 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 108/359 (30%), Gaps = 29/359 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ + VK A+KC + + +G +S E+ Sbjct: 69 PFYVADLGEVYR--QHIRWKMNLGRVKPFYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 126 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 Y K + + +K K ++ LRI Sbjct: 127 YVLAAGVDPSRIIYAHPCKTKSYLRYAAQQGVKQMTFDNADELYKIKTMCPDAELFLRIL 186 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + + NV G+ FH + F +++ Sbjct: 187 TDDSASLCRLSMKFGASLTVTRSLLELAKDLGLNVVGVSFHVGSGAEDPTAFVKAVEDAR 246 Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L + + +++ EPG V + Sbjct: 247 FVFDQASDIGHDLKVLDVGGGFCDETFERFAAALSDALDTYFPPH-IRVIAEPGRYYVAS 305 Query: 241 TTTLNTTVLDIS--------------ENIKNLVIVDSSVEAHVPDYLLYQESA------- 279 TL V+ ++ ++ V + + + + Sbjct: 306 AFTLAANVIARRDVSPAASDSDSASGPAEMYMIYLNDGVYGNFSNIVFDHQHPVAQILTK 365 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 +T P + G +C D+ + + +G+ + FE++ Y FNG Sbjct: 366 DDMASTHPVEYSIWGPTCDGIDVISKRVTLNGVLGVGNWLYFENMGAYTQCSATRFNGF 424 >gi|474034|emb|CAA47165.1| ornithine decarboxylase [Drosophila melanogaster] Length = 394 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 104/357 (29%), Gaps = 23/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + N+ + +K A+KC + L Q G +S EV L Sbjct: 33 LNICDLSSVERNVRLWQKLLPR--IKPFYAVKCNDDPMVVRLLAQLGAGFDCASKNEVKL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + ++ +K + + +R Sbjct: 91 VLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIVRFKS 150 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + + + +S V G FH + +K + Sbjct: 151 EAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAYDRAIKKAK 210 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237 F ++++ +GGG +D K ++ V I EPG Sbjct: 211 NLFKFGALLGYDMDFLDIGGGFPGSDDVKFEKIAESVNTSVQRHFPDERVHIIAEPGRFF 270 Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 V TL + E V S + D+ + + Sbjct: 271 VAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVIAEHYLDNAES 330 Query: 287 PY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 +++ G SC A D E + GD + F ++ Y + + FNG +P Sbjct: 331 LPHLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPK 387 >gi|114331408|ref|YP_747630.1| Orn/DAP/Arg decarboxylase 2 [Nitrosomonas eutropha C91] gi|114308422|gb|ABI59665.1| Orn/DAP/Arg decarboxylase 2 [Nitrosomonas eutropha C91] Length = 411 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 48/374 (12%), Positives = 99/374 (26%), Gaps = 34/374 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y D+Q + + + + L A+K + L +DG +S+ E+ Sbjct: 38 TPFYAYDRQLISTRVQSLRQHLP-PDILLHYAMKANPMPAVVQHLAGLVDGIDVASVGEM 96 Query: 64 MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E ++ E+ ++ I + +L A + + Sbjct: 97 KVALDAGVTPENISFAGPGKNRQELACAIAAGIIINMESEQELETIAQLADETGFHPKVA 156 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 + + K + G + I + GL + +N Sbjct: 157 VRVNPDFELKSSGMRMGGGSKQFGIDAERIPAVLQRIAQLKLDFEGLHIFSGSQNLRVEA 216 Query: 175 FSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225 + + I I++GGG + ++ Sbjct: 217 IQEAHEKTLQLGLQLASTSPVPIRTINIGGGFGVPYFPGENPLDLSAVGTNLKQLLAEIP 276 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272 +++ +E G IV VL+ + + ++ + H Sbjct: 277 ASSPNIRFVVELGRYIVAEAGIYVCRVLEKKLSRGQVFLITNGGLHHHLAASGNFGQVIR 336 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + TA V G C D+ + GD I Y + Sbjct: 337 KNYPVAVGNKMYISETETASVVGPLCTPLDLLANQMELSKAEPGDLIVVFQSGAYGLTAS 396 Query: 332 -NWFNGINMPTIAV 344 F P + Sbjct: 397 PTSFLSHPAPLEIL 410 >gi|114778627|ref|ZP_01453443.1| probable diaminopimelate decarboxylase protein [Mariprofundus ferrooxydans PV-1] gi|114551092|gb|EAU53653.1| probable diaminopimelate decarboxylase protein [Mariprofundus ferrooxydans PV-1] Length = 386 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 56/378 (14%), Positives = 99/378 (26%), Gaps = 39/378 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64 Y+ D + + I AGV++ A+K + G +SL E Sbjct: 10 CYVYDTTPMREKIAHLNQIMP-AGVEVFYAMKANPHPAFLQAAREAGAKGIEIASLGEAE 68 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 F Y K E TI ++++ ++ + +L K + Sbjct: 69 KAVTAGFPAGQLIYTGPGKSSEELRWGVAHGIRTIHIESLTEAHRLQAICTELGKNQDIL 128 Query: 122 INPSVSYSKFI-LADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSFL 173 + + + + + G + + GL + + Sbjct: 129 LRINADFDIHEAQTTFSGGSKKFGIDEEKLADFLPQILALDHLRFRGLHVYAASGVLNVG 188 Query: 174 CFSAMLKNIEKEFG-----HFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224 + + H T + I GGG D+ + + L E+ Sbjct: 189 DLLKNCELVFGMARNIEANHPGTCCDTIDFGGGFGVDYLEEGHDFDPQAYADGLAALIEQ 248 Query: 225 YSV---QIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280 Y +LE G + ++ T VLDI ++ K VI + L Sbjct: 249 YGFGERTFFLELGRYLAADSGWFCTEVLDIKDSRGKKQVICAGGINHFRRPAALAINHPM 308 Query: 281 IYPNTGPYT------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 G C D V +GD F Y + Sbjct: 309 AIIPMHREKLFPAQEQVRDEAVYFGGPLCTGADKLANNVLMNAVDVGDIAVFGLAGAYGL 368 Query: 329 NRKN-WFNGINMPTIAVK 345 N F P + Sbjct: 369 TMSNLEFLSHERPQEIIL 386 >gi|223995827|ref|XP_002287587.1| ornithine decarboxylase [Thalassiosira pseudonana CCMP1335] gi|220976703|gb|EED95030.1| ornithine decarboxylase [Thalassiosira pseudonana CCMP1335] Length = 386 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 51/381 (13%), Positives = 112/381 (29%), Gaps = 52/381 (13%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D + L V A+KC + TL +S E+ + Sbjct: 1 FYVVDLGIVGAQLARWRAAFPR--VVPYYAIKCNPDPVIVRTLASLGCNFDCASRGEIEI 58 Query: 66 GHE-------KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + Y K AV + F+ V+++ K ++K+ Sbjct: 59 VQQVSRGLPSGIPKPEIVYANPCKGRGHIIDAVCRGVRMMTFDNVAEVQKCAAVSRKIQL 118 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + + I + + P + + V G+ FH + + Sbjct: 119 IMRI-ITDDSGSQCRLSSKFGAPKQHWPILLAEA-KKFGLEVVGVSFHVGSGCRDATRYE 176 Query: 177 A----MLKNIEKEFGHFITQIEWISLGGGIH-----FTDKDYPVKDFCQRLKEFSEKYSV 227 + E + + + +GGG ++ + + ++ Sbjct: 177 MALKDCKELFEVAKRDYGFDMNILDIGGGFPGETHNKGNQYMYFNEIAAAVAPMLDELFP 236 Query: 228 Q-----IYLEPGEAIVTNTTTLNTTVLDIS----------------------ENIKNLVI 260 + EPG +V ++TL +V+ + Sbjct: 237 PSSGVKLIAEPGRYLVAASSTLVASVVSVREAAVSGIVRQAIADSVQPLQDDFAYYINDG 296 Query: 261 VDSSVEAHVPD---YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 V + + D + + T + Y + V G +C + D+ + +GD Sbjct: 297 VYGAFNNLLFDHATVVDEEADETSPQDETLYPSTVFGPTCDSMDVLSRGVLLPKMAVGDW 356 Query: 318 ISFEDVAGYNINRKNWFNGIN 338 + F+++ Y + FNG Sbjct: 357 MYFQNMGAYTSAAASTFNGFP 377 >gi|317155498|ref|XP_001825149.2| ornithine decarboxylase [Aspergillus oryzae RIB40] Length = 416 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 119/369 (32%), Gaps = 31/369 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ + D +++ + L + A+KC + + L + G +S E+ Sbjct: 30 PFLVADTRRIFQQHERWLQCL--PNIAPFYAVKCNSNIRLLRYLARLGVGFDCASWGEMK 87 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + K + S F+ V +L K KD A + ++ LR Sbjct: 88 LVLNLGVDPSRIIFAHPCKAVSALQMASRSGVPRTTFDNVDELEKIKDNA--PNLRLLLR 145 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I + L + + K + V+G+ FH + F ++N Sbjct: 146 IFADDDTALVSLGNKFGAPLDTTKALLLKAKDLGLVVDGVSFHVGSGASNADTFVTAVQN 205 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + F + + +GGG ++ + + +++ + + EPG Sbjct: 206 AKHVFQQGKQLGFDMHVLDVGGGFQDSNFEPMALSLQRAIEKEFPPSTQVM-AEPGRYYA 264 Query: 239 TNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 + T V L +++ I + + L QE+ + Sbjct: 265 RSFYTAACKVVARRKQIGQDKLSQSDMLYLNDGIYGCFMNAVAENEIYRPILFKQETTSS 324 Query: 282 YPNT-GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGIN- 338 G + V G +C D + VK+GD + FE++ Y FNG Sbjct: 325 TEREAGEHRYSVWGPTCDGLDCIAKEATMGCEVKVGDWVKFENMGAYTTATSTQFNGFPN 384 Query: 339 MPTIAVKNV 347 I + Sbjct: 385 RYDIIYVDD 393 >gi|153011560|ref|YP_001372774.1| Orn/DAP/Arg decarboxylase 2 [Ochrobactrum anthropi ATCC 49188] gi|151563448|gb|ABS16945.1| Orn/DAP/Arg decarboxylase 2 [Ochrobactrum anthropi ATCC 49188] Length = 377 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 109/355 (30%), Gaps = 25/355 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + + ++ A+K A + L ++S+ E+ Sbjct: 18 PCLVVDTDVVRDNYQSFEKALPYS--RIFYAVKANPAPEILRLLASLGSCFDTASVAEIE 75 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E +Y K A ++ K ++ R+ Sbjct: 76 MALEAGATPTRISYGNTIKKERDIARAFELGIRLYAVDCVEEVEKVARAAPGSRVFCRVL 135 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 +++ L+ + +S + G+ FH + + L + Sbjct: 136 TDGEGAEWPLSRKFGCVPAMAIDVLRHAKSLGLDSYGVSFHVGSQQTDLSAWDRALGDAA 195 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234 F + +++GGG L + + +EPG Sbjct: 196 SVFRTLADEGIVLRMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSKHFGNRIPETIIEPG 255 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTG 286 +V N + T V+ +S N + ++ + + + YQ T + + Sbjct: 256 RGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRYQ-IVTPHDGSE 314 Query: 287 PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 ++ G +C + D+ E + + IGD I E Y FNG Sbjct: 315 TEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAVAFNGF 369 >gi|320035934|gb|EFW17874.1| ornithine decarboxylase [Coccidioides posadasii str. Silveira] Length = 447 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 108/359 (30%), Gaps = 29/359 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ + VK A+KC + + +G +S E+ Sbjct: 71 PFYVADLGEVYR--QHIRWKMNLGRVKPFYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 128 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 Y K + + +K K ++ LRI Sbjct: 129 YVLAAGVDPSRIIYAHPCKTKSYLRYAAQQGVKQMTFDNADELYKIKTMCPDAELFLRIL 188 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + + NV G+ FH + F +++ Sbjct: 189 TDDSASLCRLSMKFGASLTVTRSLLELAKDLGLNVVGVSFHVGSGAEDPTAFVKAVEDAR 248 Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L + + +++ EPG V + Sbjct: 249 FVFDQASDIGHDLKVLDVGGGFCDETFERFAAALSDALDTYFPPH-IRVIAEPGRYYVAS 307 Query: 241 TTTLNTTVLDIS--------------ENIKNLVIVDSSVEAHVPDYLLYQESA------- 279 TL V+ ++ ++ V + + + + Sbjct: 308 AFTLAANVIARRDVSPAASDSDSASGPAEMYMIYLNDGVYGNFSNIVFDHQHPVAQILTK 367 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 +T P + G +C D+ + + +G+ + FE++ Y FNG Sbjct: 368 DDMASTHPVEYSIWGPTCDGIDVISKRVTLNGVLGVGNWLYFENMGAYTQCSATRFNGF 426 >gi|119180252|ref|XP_001241615.1| ornithine decarboxylase [Coccidioides immitis RS] Length = 447 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 108/359 (30%), Gaps = 29/359 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ + VK A+KC + + +G +S E+ Sbjct: 71 PFYVADLGEVYR--QHIRWKMNLGRVKPFYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 128 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 Y K + + +K K ++ LRI Sbjct: 129 YVLAAGVDPSRIIYAHPCKTKSYLRYAAQQGVKQMTFDNADELYKIKTMCPDAELFLRIL 188 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + + NV G+ FH + F +++ Sbjct: 189 TDDSASLCRLSMKFGASLTVTRSLLELAKDLGLNVVGVSFHVGSGAEDPTAFVKAVEDAR 248 Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L + + +++ EPG V + Sbjct: 249 FVFDQASDIGHDLKVLDVGGGFCDETFERFAAALSDALDTYFPPH-IRVIAEPGRYYVAS 307 Query: 241 TTTLNTTVLDIS--------------ENIKNLVIVDSSVEAHVPDYLLYQESA------- 279 TL V+ ++ ++ V + + + + Sbjct: 308 AFTLAANVIARRDVSPAASDSDSATGPAEMYMIYLNDGVYGNFSNIVFDHQHPVAQILTK 367 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 +T P + G +C D+ + + +G+ + FE++ Y FNG Sbjct: 368 DDMASTHPVEYSIWGPTCDGIDVISKRVTLNGVLGVGNWLYFENMGAYTQCSATRFNGF 426 >gi|301166995|emb|CBW26574.1| putative diaminopimelate decarboxylase [Bacteriovorax marinus SJ] Length = 405 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 112/370 (30%), Gaps = 23/370 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + + +Y D L ++L R ++ +KL A K + G +S Sbjct: 22 LDSSFYFYDLDGLKDHLSYMRDTRDDS-IKLWYACKANPMSAILKIFRNLDFGLDVASQG 80 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118 E+ E K + + + ++ +++Q + A++L + Sbjct: 81 ELEQVLSAGILPEDILSTGPSKSRKYLRSMIINEVNVVVLESLNQAYWLDEIARELGARP 140 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---KIESEIKNVNGLMFHNNCE------N 169 + + + + + + G K+ +S+ +N++ FH + Sbjct: 141 KVLLRVQLDWDEGKSVLGGDEITPFGLDEKEWLKLDKSKCQNLDFKGFHVFQWGNLLELS 200 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----RLKEFSEK 224 + + + +++ +E I LGGG+ + +K E Sbjct: 201 RLERIWRGTIVSLQDLSKKMDIDMEVIDLGGGLGIPYAANETPLDFKDVNSLLVKLRDEY 260 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATIYP 283 I++E G + V+D ++V H+ L Q Sbjct: 261 KLQTIWMELGRYCTGPYGHYLSQVIDKKVVRGRDILVLDGGINHIARPALTDQAFPCEMF 320 Query: 284 NT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINM 339 V G C A D G F + + GD + F Y F N+ Sbjct: 321 RESDAKTKEFTVHGPLCTALDKLGTFQLPEDIDEGDWLVFSQAGAYGFTEAMPFFLCHNL 380 Query: 340 PTIAVKNVDG 349 P + Sbjct: 381 PAEVILYNGD 390 >gi|30249115|ref|NP_841185.1| Orn/DAP/Arg decarboxylase family protein [Nitrosomonas europaea ATCC 19718] gi|30138732|emb|CAD85037.1| Orn/DAP/Arg decarboxylases family 2 [Nitrosomonas europaea ATCC 19718] Length = 409 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 45/375 (12%), Positives = 97/375 (25%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y D++ + + AG+ L A+K + L +DG +S+ E+ Sbjct: 36 TPFYAYDRKLISARIQFLRQHLP-AGIHLHYAMKANPMPAVVQHLAGLVDGMDVASVGEM 94 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E ++ K + I + +L A++ + + Sbjct: 95 KVALDAGITPENISFAGPGKSRQELICAIAAGIVINVESEYELETIAQLAEETGFQPKVA 154 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSFLC 174 + + K + G + +I + GL + +N Sbjct: 155 VRVNPDFELKSSGMKMGGGSKQFGIDAECVPAVLQRIAQLRFDFEGLHIFSGSQNLRVEA 214 Query: 175 FSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225 + + + I++GGG + ++ Sbjct: 215 LREAHEKTLQLGLQLASTSPVPVRAINIGGGFGVPYFPGESPLDLNAVGTNLQRLLAEIP 274 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272 +++ +E G IV VL+ + +V + H Sbjct: 275 SQFSAIRFVIELGRYIVAEAGIYVCRVLEKKISRGQTFLVTNGGLHHHLAASGNFGQVIR 334 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 V G C D+ + + GD + Y + Sbjct: 335 KNYPVAIGNKMKIDETEIVSVVGPLCTPLDLLADRMELSRAEPGDLVVVFQSGAYGLTAS 394 Query: 332 NW-FNGINMPTIAVK 345 F + Sbjct: 395 PTAFLSHPASLEVLI 409 >gi|289627600|ref|ZP_06460554.1| hypothetical protein PsyrpaN_21127 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648756|ref|ZP_06480099.1| hypothetical protein Psyrpa2_13540 [Pseudomonas syringae pv. aesculi str. 2250] gi|330869725|gb|EGH04434.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 402 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 60/385 (15%), Positives = 121/385 (31%), Gaps = 35/385 (9%) Query: 2 IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 ++T P ++ D L ++ + AGV+L A+K + M +TL + G S Sbjct: 18 LETDPLAAFVYDLDALQQHVTDVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76 Query: 59 SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 S E+ + + ++ D ++ + L N I +++++ + + A++ + Sbjct: 77 SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAEETGR 136 Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + L E + + + G H Sbjct: 137 VQPVFLRINPQLPAAQSSKLAMAGTATPFGIDETDLAEAIRRVDSASHLTLKGFHVHAMS 196 Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218 S +L + + + Q+ ++GGGI + + + C+ L Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256 Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275 ++ + L EPG I VLD + +V Sbjct: 257 EKRLGEQRDTPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQG 316 Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + I+ P T V G+ C D+ K V IGD + Y Sbjct: 317 HDHPVIHVPCAPATGASEEQAYTVVGQLCTPKDVLSRQQPLKGVNIGDLLVLPLAGAYGY 376 Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352 N + F P ++ Sbjct: 377 NISHVDFLCHPRPVQHFVRNGERVR 401 >gi|242240545|ref|YP_002988726.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech703] gi|242132602|gb|ACS86904.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech703] Length = 392 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 55/374 (14%), Positives = 115/374 (30%), Gaps = 34/374 (9%) Query: 5 PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P+ Y+ D L + G +L A K + TL +DG ++S E Sbjct: 19 PFCAYVYDLSALHAHASAMKAALP-PGCELFYAAKANPDAAILTTLADSVDGFEAASGGE 77 Query: 63 VMLGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + E+ G + AV D + ++++L + + A++L + + Sbjct: 78 LSWLTEQVPGRRLIFGGPGKLPAELEQAVAQRIDALHVESLNELQRLEQCAERLATPVNI 137 Query: 121 RINPSV--SYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN-- 169 + ++ + G + + + + G FH Sbjct: 138 MLRMNIPLEGVTGTRLMMGGKPTPFGLDVAELPAAIARIKASRGLKLQGFHFHLMSHQLE 197 Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223 L + + F Q+ +++GGGI + + +DFC++L + Sbjct: 198 VATHLSLMRRYLDTVHQWQRQFDIQVPVVNVGGGIGINYLDPQRHFDWQDFCRQLPQVIA 257 Query: 224 K---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESA 279 + + +++ E G + VLD+ +N+ + H Sbjct: 258 QTGSHGLRLRFECGRYVSAACGYYVMEVLDVKKNLGEWFAIAHGGTHHFRTPAAQGHNHP 317 Query: 280 -------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + P + G+ C D+ + GD + F Y N + Sbjct: 318 FSVLRREHLPPTVEQQPITLVGQLCTPKDVLARQQPVAALAPGDWLVFHLAGAYAWNISH 377 Query: 333 -WFNGINMPTIAVK 345 F P + Sbjct: 378 QNFLMHAPPEMIYL 391 >gi|320534481|ref|ZP_08034951.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 171 str. F0337] gi|320133312|gb|EFW25790.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 171 str. F0337] Length = 486 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 57/430 (13%), Positives = 121/430 (28%), Gaps = 68/430 (15%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDG 54 +P +++D+ L + AG + A K F A + + + G Sbjct: 54 PSPVFVLDEADLRGRAASWSAAMAEEFWPNYGMAGGEAFYAGKAFLATKVAQWVLEEGMG 113 Query: 55 TTSSSLYEVMLGHEKFGG-----------ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVS 102 ++S E+ +G + E AV ++ ++ Sbjct: 114 IDTASRVELAVGLAGLEKVDGYEATTRARRLGLHGNGKTPAEVTTAVRHRVGHLVIDSPE 173 Query: 103 QLNKFKDKAQKLHK----------KIGLRINPSVSYSKFILADPNRPFSRLGE------- 145 +++ +L + ++ +R+ + + G Sbjct: 174 EVDYAVAAVHELRRSGDFGPAERARVMVRLTTGIHAGGHEYISTAHEDQKFGLSVSTGAA 233 Query: 146 --KCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLG 199 + +E + GL H + F +L + I LG Sbjct: 234 RRTIDAIMAAEELELAGLHSHIGSQILDLAGFREAVGVVLGLRHEIAVDTGHLCPEIDLG 293 Query: 200 GGIHFTDKDYPVKDF---------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTT 247 GG + ++E E+ + +EPG A+ TT T Sbjct: 294 GGYGIAYTGADPVAPSPAQVARALAEAVRETCERLGDEVPTVSIEPGRAVAGPTTVTLYT 353 Query: 248 VLDISENI------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA------MVCGR 295 V + + V +D + ++ L + N P V G+ Sbjct: 354 VTGLKRVELGAGASRLYVSIDGGMSDNIRPALYEAAYTALVANRRPDPQAGLVRSRVVGK 413 Query: 296 SCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 C +GD+ + +GD ++ Y + + +N P + + + Sbjct: 414 HCESGDVVVRDVDLPTDLAVGDVLAVPATGAYGRSMASSYNLFTRPGVRWVLEGESGWVL 473 Query: 355 REFSYNDYYN 364 R + D Sbjct: 474 RPETIEDLLR 483 >gi|304310859|ref|YP_003810457.1| Ornithine decarboxylase [gamma proteobacterium HdN1] gi|301796592|emb|CBL44804.1| Ornithine decarboxylase [gamma proteobacterium HdN1] Length = 387 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 53/371 (14%), Positives = 112/371 (30%), Gaps = 31/371 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP++LID + A A+K ++ + LNQ ++S+Y Sbjct: 21 LETPFFLIDLDLIEQQYRLLREALPFAAC--YFAMKSNSSTAVIQRLNQLGSRFEAASIY 78 Query: 62 EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + ++A + F++ +L K A + Sbjct: 79 EIRRCLALGVPPRDIHFGNTIKKDSHILEAYRLGVHSYAFDSSQELEKIAQLAPGSNVSC 138 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 L + + L + S G+ FH + +S + Sbjct: 139 RLATDGKGAVWG--LCRKFGRDPDDVVELMKYAHSLGLRAYGISFHTGSQQRSAGAWRRT 196 Query: 179 LKNIEKEFGHFITQ---IEWISLGGGIH-------FTDKDYPVKDFCQRLKEFSEKYSVQ 228 ++ Q I+LGGG + ++ + +K ++ Q Sbjct: 197 IEICADIIQRLNQQQVYPRLINLGGGFPSYQYAGDEMQPQGDIFEYGKVIKTAVDELLPQ 256 Query: 229 ---IYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEAHVPDYLLYQESA 279 +EPG I + TV+ + + + + + + Sbjct: 257 GIDCVMEPGRFITAAAGLVKATVILVLDKATDGVPTRWVYLDAGRFNGLYESVDVEYPII 316 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEF---HFEKP-VKIGDRISFEDVAGYNIN-RKNWF 334 T + ++ G +C + D+ + F + GD + F + Y+ + F Sbjct: 317 TNRTDGTAIRTVLAGPTCDSDDVMYDRDRAVFLPDTLTQGDSLIFTNAGAYSKSYMTVDF 376 Query: 335 NGINMPTIAVK 345 NG V Sbjct: 377 NGFPPMQEYVV 387 >gi|474030|emb|CAA47167.1| ornithine decarboxylase [Drosophila melanogaster] Length = 394 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 103/357 (28%), Gaps = 23/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + N+ + +K A+KC + L Q G +S EV L Sbjct: 33 LNICDLSSVERNVRLWQKLLPR--IKPFYAVKCNDDPMVVRLLAQLGAGFDCASKNEVKL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + ++ +K + + +R Sbjct: 91 VLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIVRFKS 150 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + + + +S V G FH + +K + Sbjct: 151 EAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAYDRAIKKAK 210 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237 F ++++ +GGG +D + ++ V I EPG Sbjct: 211 NLFKFGALLGYDMDFLDIGGGFPGSDDVKFEQIAESVNTSVQRHFPDERVHIIAEPGRFF 270 Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 V TL + E V S + D+ + Sbjct: 271 VAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVIAEHYQDNAES 330 Query: 287 PY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 +++ G SC A D E + GD + F ++ Y + + FNG +P Sbjct: 331 LPHLKSLIWGPSCDALDQISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPK 387 >gi|195474572|ref|XP_002089565.1| GE19168 [Drosophila yakuba] gi|194175666|gb|EDW89277.1| GE19168 [Drosophila yakuba] Length = 394 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 102/357 (28%), Gaps = 23/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + L + +K A+KC + L + G +S EV L Sbjct: 33 LNICDLSSVERKLRLWQRLLPR--IKPFYAVKCNDDPVVVRLLAELGAGFDCASKNEVKL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + ++ +K + + +R Sbjct: 91 VLGFGVQPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIVRFKS 150 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + + + +S V G FH + +K + Sbjct: 151 EAKEAQCPLGDKFGCDADVDAAALMLLAKSLDLKVTGTSFHVGSGCSELEAYDRAIKKAK 210 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237 F ++ + +GGG +D K ++ V I EPG Sbjct: 211 NLFKFGALLGYDMDLLDIGGGFPGSDDGKFEKIAESVNTSVQRHFPNERVHIIAEPGRFF 270 Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT- 285 V TL + E V S + D+ + + Sbjct: 271 VAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVTAEHYLDNADS 330 Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 +++ G SC A D E + GD + F ++ Y + + FNG +P Sbjct: 331 LPQLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPK 387 >gi|83951296|ref|ZP_00960028.1| decarboxylase, pyridoxal-dependent [Roseovarius nubinhibens ISM] gi|83836302|gb|EAP75599.1| decarboxylase, pyridoxal-dependent [Roseovarius nubinhibens ISM] Length = 392 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 116/364 (31%), Gaps = 29/364 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D+ ++ D ++ A+K A + L Q ++S E+ Sbjct: 34 PTLVVDRGRIAQQYDALAEGLGE--ARIHYAVKANPAPEIIAMLVQRGARFDAASRGEIE 91 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + G ++ K A + ++ ++L K A + + Sbjct: 92 LCLSQGAKGSDISFGNTVKRPSDIAFAQSVGVELFSADSDAELEKIAQHAPGAKVYLRVI 151 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---M 178 + + P + + D ++ GL FH + K + Sbjct: 152 VENENADWPLSRKFGCAPGAMA--ELMDYARGLDVDIVGLSFHVGSQTKEARHWLPVLDQ 209 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIYL--EP 233 + + + ++LGGG P + ++ ++ Y+ EP Sbjct: 210 VAELWHAARAAGHDMRVLNLGGGFPAHYDQSVQGPQAYAAEVMEAVRARFGQPEYVMAEP 269 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLYQESATIYPNT 285 G +V + V+ +S + + ++ + + + Y + T+ Sbjct: 270 GRGLVAEAGHIAAEVMLVSRKSPDDLHRWVYLDIGMFSGLAECAGEAIRY-KIDTLRDGE 328 Query: 286 GPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPT 341 ++ G SC + DI E ++ GDR+ + Y + + FNG P Sbjct: 329 ETGPCVLAGPSCDSADILYEKRPIQLPLSLQSGDRVMIRNCGAYTSSYSSVGFNGFP-PL 387 Query: 342 IAVK 345 V Sbjct: 388 EVVV 391 >gi|119468237|ref|ZP_01611363.1| diaminopimelate decarboxylase, PLP-binding protein [Alteromonadales bacterium TW-7] gi|119448230|gb|EAW29494.1| diaminopimelate decarboxylase, PLP-binding protein [Alteromonadales bacterium TW-7] Length = 401 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 52/378 (13%), Positives = 113/378 (29%), Gaps = 27/378 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+++ D KL +L + VKL A+K + +L+ +S Sbjct: 19 LDTPFFVYDLDKLNAHLTRLV---AQTDVKLWYAVKANPLSKVIQSLDSAGFNFDVASKG 75 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + K + + +++Q+ +AQ + ++ Sbjct: 76 ELEQVLAQGISSQRVLNTGPAKSPKQIKYFIERGVRIFVAESLNQVRWLNQQAQLQNTQL 135 Query: 119 GLRINPSVSYSKFILADPNRPF-SRLGEKCKDKI-----ESEIKNVNGLMFH----NNCE 168 + + + + + + G C + + N +GL Sbjct: 136 QVLLRVQLRWPEGEKNPLGGDSLTPFGLGCDEWQALNTGDYPALNFDGLHIFQWGNMLST 195 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSE 223 K +S M+ + + ++ + LGGG+ K E Sbjct: 196 QKLSELWSQMIAPLTTLANNLNINLKILDLGGGLGIPYTQNETILEWDGLIAALAKIKKE 255 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY 282 ++++E G V V++ +N ++ + + + Q+ Sbjct: 256 ACVDELWMELGRYAVGECGHYANPVIECKQNYGQQQVILTGGINHLLRPAVTSQDFPAAL 315 Query: 283 PNTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 + G C A D GE +K D + F Y F Sbjct: 316 LRESTAPEQAMSLYGPLCTALDCLGEHTLPSDLKEQDWLVFSQCGAYGFTESMPYFLCHE 375 Query: 339 MPTIAVKNVDGTIKAIRE 356 + V +G + +R+ Sbjct: 376 LAAEYVL-QNGELTCVRQ 392 >gi|1706323|sp|P50134|DCOR_DATST RecName: Full=Ornithine decarboxylase; Short=ODC gi|871008|emb|CAA61121.1| ornithine decarboxylase [Datura stramonium] Length = 431 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 115/362 (31%), Gaps = 26/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ +D + ++ A+KC L+ +S E+ Sbjct: 64 PFYVLDLGEVVSLMD--QWNAGLPNIRPFYAVKCNPEPSFLSMLSAMGSNFDCASRAEIE 121 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K A + F++ ++ K + K + ++ Sbjct: 122 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTFDSEDEVYKIRKHHPKCELLLRIK 181 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + + ++ V+G+ FH + + + Sbjct: 182 PMDDGNARCPMGPKYGALPEEVEPLLRTA-QAARLTVSGVSFHIGSGDADSKAYLGAIAA 240 Query: 182 IEKEF----GHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + F ++++ + +GGG + F ++ + I EPG Sbjct: 241 AKGVFETAARFGMSKMTVLDIGGGFTSGHQFTTASAAVRSALEQHFHDEQELTIIAEPGR 300 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPN------ 284 TL TT++ + S+ + D+ + + Sbjct: 301 FFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLACMSNRSNLN 360 Query: 285 ---TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + + V G +C A D + +++ D + F ++ Y + FNG N Sbjct: 361 CGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTSA 420 Query: 342 IA 343 I Sbjct: 421 IV 422 >gi|163736245|ref|ZP_02143664.1| Orn/DAP/Arg decarboxylase 2 [Phaeobacter gallaeciensis BS107] gi|161390115|gb|EDQ14465.1| Orn/DAP/Arg decarboxylase 2 [Phaeobacter gallaeciensis BS107] Length = 828 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 60/395 (15%), Positives = 107/395 (27%), Gaps = 39/395 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+YL D L LD +LK + L+ + G SSL E Sbjct: 21 GTPFYLYDASVLRRRLDALRAALPQVDF--FYSLKSNPNLSVTRVLHGHGAGCEVSSLLE 78 Query: 63 VMLGH-EKFGGETHAY-NVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + E + E A+ I+ + +L + A++ + Sbjct: 79 LETSLQAGATPERILMVGPGKSETELTRAIELGIKAIVVESAYELTQIDALARQQGRVQN 138 Query: 118 IGLRINPSVSYSKFILADPNRPFS------RLGEKCKDKIESEIKNVNGLMFHNNCENKS 171 I LR+NP L RP L + K + GL + + Sbjct: 139 IALRVNPDFHAGGAKLNMSGRPTQFGIDQSELPDVLKQAEGCAQLRLCGLHAYMGTRILT 198 Query: 172 FLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 +L + ++++ +GGG D + L + Sbjct: 199 HETVVANVGNILNLATEVVSSLKVPLDFVDVGGGFGIPYYDGETELDLDALGQAVTPLVQ 258 Query: 228 QI---------YLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV-------- 269 +E G + + T V + ++ + D HV Sbjct: 259 SFGTTHPKTRVVIELGRYLSGPSGQFVTRVQQTKSSKGEHFAVCDGGSNVHVAAAGQGFL 318 Query: 270 ---PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L ++ + + G C D+ G+ ++GD IS Y Sbjct: 319 RKNFPIRLLRDGKAEIDDEAAQPWTLTGPLCTPQDVIGKSVLMATPQVGDLISIGQSGAY 378 Query: 327 NINRKN-WFNGINMPTIAVKNVDGTIKAIREFSYN 360 F G P + + + Sbjct: 379 GPTASPVNFLGFGAPAEVMIDGTELRLVRSRDTVE 413 >gi|307201784|gb|EFN81457.1| Ornithine decarboxylase [Harpegnathos saltator] Length = 427 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 53/369 (14%), Positives = 117/369 (31%), Gaps = 24/369 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++ + K V A+KC + L G +S E+ Sbjct: 34 PFYIVDIGDIIRKHHEWIT--KMPKVIPHYAVKCNPDPTVIKVLAALNAGFDCASQQEIR 91 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + + A N + + +L K K+ + I +R Sbjct: 92 QVMQYGVQSDRIIFANPTKCPSHIKFAKKKNVSRMTVDGELELLKIKELYPEAEIVIRIR 151 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS----A 177 + S P + + ++G FH FS Sbjct: 152 CDSKNSLVPLGSKFGCEPDEE-AVRLIQLTKDLGLTLHGFSFHVGSPCGEMSAFSKGIGI 210 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGE 235 + I ++ I +GGG + + + + ++ EPG+ Sbjct: 211 CKQLIAIARAIGCENVQMIDIGGGFPGASDT-DIDKLANIVNDAIQDLDPSIRVISEPGQ 269 Query: 236 AIVTNTTTLNTT------VLDISENIKNLVIVDSSVEAHVPDY----LLYQESATIYPNT 285 VT+ TL + V + ++ + + + + Y + + Sbjct: 270 YYVTSAFTLASYLHSKKLVRRSGKLMRMYYVNCGVYNSFIEEMLGLKARYPQFLFEPDSH 329 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA-V 344 + + + G +C + D+ + ++IGD + ++D+ Y ++ + FNG P + + Sbjct: 330 EKFISSLWGPTCDSYDVILKDVLMPELRIGDWLVWKDMGAYTLSISSTFNGFPSPMVVPI 389 Query: 345 KNVDGTIKA 353 K Sbjct: 390 IRKSQWEKL 398 >gi|212537713|ref|XP_002149012.1| ornithine decarboxylase [Penicillium marneffei ATCC 18224] gi|210068754|gb|EEA22845.1| ornithine decarboxylase [Penicillium marneffei ATCC 18224] Length = 472 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 53/376 (14%), Positives = 102/376 (27%), Gaps = 46/376 (12%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + +K A+KC + + + G +S E+ L Sbjct: 80 FYVADMGEVYR--QHMRWKMNLGRIKPFYAVKCNPDPEVLRLMAKLGLGFDCASKTEIDL 137 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K + +K K ++ LRI Sbjct: 138 ALKTGIDSSRIIYAQPCKTRSYLRYARQKGVKQMTFDNTDELYKIKNDFPDAELYLRILT 197 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ D + NV G+ FH + F ++ Sbjct: 198 DDSTSLCRLSMKFGASLDTARPLLDLAKKLELNVVGVSFHVGSGAEDPGAFLKAAQDARW 257 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F ++ + +GGG + + + + + +I EPG V Sbjct: 258 VFDQAAEVGYELHTLDVGGGFCDNTFEKFAAILSKAVDDLFPAHV-RIIAEPGRYYVAAA 316 Query: 242 TTLNTTVLD-----------------------------ISENIKNLVIVDSSVEAHVPDY 272 TL V+ I ++ + + + +P Sbjct: 317 FTLAANVIARRDVFDPQNSSGSYMIYLNDGVYGNFSNIIFDHQHPVAQILTCANGSIPPT 376 Query: 273 L---------LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFED 322 + + G +C D+ + + +GD + FED Sbjct: 377 PGLTASGSSTPDPSAGDSPCAPAGVEYSIWGPTCDGIDVISQQIVLPGLVDVGDWLYFED 436 Query: 323 VAGYNINRKNWFNGIN 338 + Y FNG Sbjct: 437 MGAYTRCSATRFNGFP 452 >gi|257484348|ref|ZP_05638389.1| hypothetical protein PsyrptA_13912 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008402|gb|EGH88458.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 402 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 60/385 (15%), Positives = 121/385 (31%), Gaps = 35/385 (9%) Query: 2 IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 ++T P ++ D L ++ + AGV+L A+K + M +TL + G S Sbjct: 18 LETDPLAAFVYDLDALQQHVTDVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76 Query: 59 SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 S E+ + + ++ D ++ + L N I +++++ + + A++ + Sbjct: 77 SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAEETGR 136 Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + L E + + + G H Sbjct: 137 MQPVFLRINPQLPAAQSSKLAMAGTATPFGIDETDLAEAIRRVDSASHLTLKGFHVHAMS 196 Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218 S +L + + + Q+ ++GGGI + + + C+ L Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256 Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275 ++ + L EPG I VLD + +V Sbjct: 257 EKRLGEQRDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQG 316 Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + I+ P T V G+ C D+ K V IGD + Y Sbjct: 317 HDHPVIHVPCAPATGASEEQAYTVVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGY 376 Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352 N + F P ++ Sbjct: 377 NISHVDFLCHPRPVQHFVRNGERVR 401 >gi|126740499|ref|ZP_01756186.1| decarboxylase, pyridoxal-dependent [Roseobacter sp. SK209-2-6] gi|126718300|gb|EBA15015.1| decarboxylase, pyridoxal-dependent [Roseobacter sp. SK209-2-6] Length = 404 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 108/362 (29%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + ++ A+K + L ++ E+ Sbjct: 46 PTLVVDLDAVAAQYRALEAGLGR--ARIHYAVKANPEAAILKRLVALGAHFDAAGRAEID 103 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + ++ K A C F + K ++ LRI Sbjct: 104 MCLAAGATAAQISFGNTIKRPADIAYAHACGITHFAFDASEELEKIATHAPGAEVCLRII 163 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---MLK 180 + + L+ + D+ VNGL FH + + + Sbjct: 164 VENCEADWPLSRKFGCAPEDALRLMDQARGLGLVVNGLSFHVGSQTREPDMWVPVLDQAA 223 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-----KYSVQIYLEPGE 235 I ++ + +++GGG + + + + +I EPG Sbjct: 224 AIWRQAREAGHALRLVNIGGGFPASYDQQMQGAEAYAREVMKQVEARFGEAAEIMAEPGR 283 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287 +V + VL +S+ +N + S + + + + Y+ T + Sbjct: 284 GLVAEAGAIAAEVLLVSKKHENDLHRWVYLDVGKFSGLAETMDEAIRYR-ITTDRDHEAK 342 Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343 +V G SC + D+ E + +K GDR+ Y + FNG + Sbjct: 343 GPCVVAGPSCDSVDVLYEKQPYQLPTGLKAGDRVVIHSCGAYTSTYASIGFNGFPPLDVI 402 Query: 344 VK 345 V Sbjct: 403 VI 404 >gi|77457028|ref|YP_346533.1| ornithine decarboxylase [Pseudomonas fluorescens Pf0-1] gi|77381031|gb|ABA72544.1| putative ornithine decarboxylase [Pseudomonas fluorescens Pf0-1] Length = 387 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 113/361 (31%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D + K+ A+K A + D L + +S+YE Sbjct: 25 ETPFVVIDTAMIAQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + +Y K + ++ + L A + Sbjct: 83 LDKVLSRGVSADQISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I + + G+ FH + + + A Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227 + ++ F ++ I++GGG ++ + LKE Sbjct: 200 AIAKVKVIFERLKEEDGIHLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG +++ N L + V+ ++ + + + + Sbjct: 260 EIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|225850437|ref|YP_002730671.1| diaminopimelate decarboxylase [Persephonella marina EX-H1] gi|225646093|gb|ACO04279.1| diaminopimelate decarboxylase [Persephonella marina EX-H1] Length = 451 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 127/394 (32%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++I ++KL + V+ + K + L+Q S Sbjct: 48 GSPLFVISERKLRERYRKIYNAFSSRYPNVQFGWSYKTNYLKAVCSVLHQEGAIAEVVSA 107 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 +E G+ +N +K +I ++ I + ++ + A +L KKI Sbjct: 108 FEYEKARNLGIDGKNIIFNGPHKTLDILEKAASEGAMIHIDHFDEIIDLEKIADRLGKKI 167 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLCF 175 + I ++ D G+ +NGL H + Sbjct: 168 KVAIRVNMDTGIHPQWDRFGFNLETGQALDAVKRIATGGKLVLNGLHSHIGTFILEPEAY 227 Query: 176 ----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------ 225 ++K + +F +IE++ +GGG +K L E+Y Sbjct: 228 GKEVEKLVKLAYEIEDNFGFKIEYLDIGGGFPSKNKLKGTYLPPDVLVPSVEEYAEKITE 287 Query: 226 ----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLL 274 ++ LE G AI+ L TT+ + ++ Sbjct: 288 ALYSNLRPGDFPKLILETGRAIIDEAEYLITTIFASKRLPDGRKAYIADAGVNILFTAFW 347 Query: 275 YQESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 Y+ + I +++ G C+ D+ + P++ G R+ V YN + Sbjct: 348 YKFNIEIDREVQGTNEPSVIYGPLCMNIDVIDDGTMLPPLERGTRLIISPVGAYNNTQWM 407 Query: 333 WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365 F P + + DG+++ +R +D Sbjct: 408 QFIEY-RPNVVMIMEDGSVEIVREREDISDIERR 440 >gi|71734209|ref|YP_274941.1| hypothetical protein PSPPH_2752 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554762|gb|AAZ33973.1| LysA [Pseudomonas syringae pv. phaseolicola 1448A] gi|320324164|gb|EFW80244.1| hypothetical protein PsgB076_13342 [Pseudomonas syringae pv. glycinea str. B076] gi|320328441|gb|EFW84443.1| hypothetical protein PsgRace4_18243 [Pseudomonas syringae pv. glycinea str. race 4] gi|330885703|gb|EGH19852.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. glycinea str. race 4] Length = 402 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 60/385 (15%), Positives = 121/385 (31%), Gaps = 35/385 (9%) Query: 2 IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 ++T P ++ D L ++ + AGV+L A+K + M +TL + G S Sbjct: 18 LETDPLAAFVYDLDALQQHVTDVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76 Query: 59 SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 S E+ + + ++ D ++ + L N I +++++ + + A++ + Sbjct: 77 SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAEETGR 136 Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + L E + + + G H Sbjct: 137 VQPVFLRINPQLPAAQSSKLAMAGTATPFGIDETDLAEAIRRVDSASHLTLKGFHVHAMS 196 Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218 S +L + + + Q+ ++GGGI + + + C+ L Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256 Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275 ++ + L EPG I VLD + +V Sbjct: 257 EKRLGEQRDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQG 316 Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + I+ P T V G+ C D+ K V IGD + Y Sbjct: 317 HDHPVIHVPCAPATGASEEQAYTVVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGY 376 Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352 N + F P ++ Sbjct: 377 NISHVDFLCHPRPVQHFVRNGERVR 401 >gi|163741227|ref|ZP_02148619.1| hypothetical protein RG210_17245 [Phaeobacter gallaeciensis 2.10] gi|161385580|gb|EDQ09957.1| hypothetical protein RG210_17245 [Phaeobacter gallaeciensis 2.10] Length = 828 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 60/395 (15%), Positives = 105/395 (26%), Gaps = 39/395 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+YL D L LD +LK + L+ + G SSL E Sbjct: 21 GTPFYLYDASVLRGRLDALRAALPQVDF--FYSLKSNPNLSVTRVLHGHGAGCEVSSLLE 78 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117 + E K A I+ + +L + A++ + Sbjct: 79 LETSLQAGATPERILMVGPGKSETELARAIELGIKAIVVESAHELTQIDALARQQGRVQN 138 Query: 118 IGLRINPSVSYSKFILADPNRPFS------RLGEKCKDKIESEIKNVNGLMFHNNCENKS 171 I LR+NP L RP L + K + GL + + Sbjct: 139 IALRVNPDFHAGGAKLNMSGRPTQFGIDQSELPDVLKQAESCAHLRLCGLHAYMGTRILT 198 Query: 172 FLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 +L + ++++ +GGG D + L + Sbjct: 199 HETVVANVGNILNLATEVISTLKAPLDFVDVGGGFGIPYYDGETELDLDALGQAVTPLVQ 258 Query: 228 QI---------YLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV-------- 269 +E G + + T V + ++ + D HV Sbjct: 259 SFGATHPKTRVVIELGRYLSGPSGQFVTRVQQTKSSKGEHFAVCDGGSNVHVAAAGQGFL 318 Query: 270 ---PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 L ++ + + G C D+ G+ ++GD IS Y Sbjct: 319 RKNFPIRLLRDGKAEIDDEAAQPWTLTGPLCTPQDVIGKSVLMATPQVGDLISIGQSGAY 378 Query: 327 NINRKN-WFNGINMPTIAVKNVDGTIKAIREFSYN 360 F G P + + + Sbjct: 379 GPTASPVNFLGFGAPAEVMIDGTELRLVRSRDTVE 413 >gi|237797381|ref|ZP_04585842.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020231|gb|EGI00288.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 402 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 123/376 (32%), Gaps = 32/376 (8%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 ++ D L ++ + AGV+L A+K + M +TL + G SS E+ Sbjct: 26 FIYDLDALQQHVREVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIERV 84 Query: 67 HEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQK--LHKKIGLRI 122 + + ++ D ++ + L N + +++++ + + A++ + + +RI Sbjct: 85 MACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEETGRVQPVFIRI 144 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENKSFLCF 175 NP + + + G D + + G H S Sbjct: 145 NPHLPAEQSSKLAMAGTATPFGIDEADLTQAVSLVDSASHLTLKGFHVHAMSHQMSVERH 204 Query: 176 SAMLKNIEKEFGHFI------TQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYS 226 +L + + + Q+ ++GGGI + + + C+ L++ ++S Sbjct: 205 EQLLDFYLQRWQAWKALARYPDQLTHFNVGGGIGVDYLNSQQFDWQRLCRYLEKRLAEHS 264 Query: 227 VQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYP 283 L EPG I VLD + +V + I+ Sbjct: 265 DAPILRFEPGRFISAYCGYYVIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQGHDHPVIHL 324 Query: 284 NTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335 + P T V G+ C D+ K V IGD + Y N + F Sbjct: 325 PSVPPTAAPSEQAYTVVGQLCTPKDVLSRRQPLKNVNIGDLLVLPMAGAYGYNISHADFL 384 Query: 336 GINMPTIAVKNVDGTI 351 P + Sbjct: 385 CHPRPLQHFVRNGQRV 400 >gi|119899537|ref|YP_934750.1| diaminopimelate decarboxylase [Azoarcus sp. BH72] gi|119671950|emb|CAL95864.1| probable diaminopimelate decarboxylase [Azoarcus sp. BH72] Length = 427 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 45/376 (11%), Positives = 97/376 (25%), Gaps = 34/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+Y D+ L + + +KL A+K + + + +DG +S E Sbjct: 53 QTPFYAYDRSLLDARVAQLRAALP-SEIKLHYAMKANPMPALVGHMVRLVDGIDVASAGE 111 Query: 63 VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + + ++ ++ E+ ++ I + +L L + Sbjct: 112 LQVALDAGADPKEISFAGPGKREQELLQAVAAGILINVESFRELPILAAAQDALGLPARV 171 Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 + + K + G +D I + G +N Sbjct: 172 AVRVNPDFELKSSGMKMGGGPKQFGVDAEDVPRLLAEIGNAGLAFEGFHLFAGSQNLRPE 231 Query: 174 ---CFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---- 225 + + +++LGGG + + Sbjct: 232 AIVEAQQKSYALAVRLAEHAPTAVRFLNLGGGFGIPYFPGETPLDLAPIGDNLGAIVAAA 291 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 +I +E G +V V+D + + +V H Sbjct: 292 RQQLPEAEIVIELGRYLVGEAGIYVARVVDKKVSRGQIYLVTDGGLHHHLSASGNFGQVI 351 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + T V G C D+ + + GD + Y + Sbjct: 352 RKNYPAAIGNRIEGSMRETVSVVGPLCTPLDLLADKMSLPAAEPGDLVVVYQSGAYGASA 411 Query: 331 KNW-FNGINMPTIAVK 345 F G + Sbjct: 412 SPQRFLGHPAVAEVLV 427 >gi|50085824|ref|YP_047334.1| putative ornithine decarboxylase [Acinetobacter sp. ADP1] gi|49531800|emb|CAG69512.1| putative ornithine decarboxylase [Acinetobacter sp. ADP1] Length = 386 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 112/361 (31%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+ ++D + + + ALK A + D LN +S+ E Sbjct: 23 DTPFLVLDLSVIEKHYLELKQGF--PNTDIYYALKANPANEVIDRLNSLGSNFDLASVNE 80 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + A+ K + ++ LN A Sbjct: 81 LKKVQAFGVDASRLAFGNTIKKRIDIQYFYDQGVRLYVTDSDIDLNNIAHYAPGSKVFFR 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 L I+ + + I+++ + G+ FH + + + + Sbjct: 141 LSID---GSETADWPLSGKFGCNAECVIRLAIKAKELGLIPYGISFHVGSQQRKIDLWDS 197 Query: 178 MLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227 L+ + F +++ ++LGGG+ K L+ F + Sbjct: 198 ALQETKAIFDVLATEHNIRLKMLNLGGGLPAQYVQETEAFDNYSKQINAALEIFKSYHLE 257 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLL-YQESATI 281 QI LEPG ++V N L + ++ IS+ + + + Q Sbjct: 258 QIILEPGRSLVGNAGILVSEIVLISQRPQSGTKRWVYTDVGVFNGLIETLGESIQYPIMC 317 Query: 282 YPNTGPYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 ++ G +C + DI ++ ++IGD + + Y + + FNG Sbjct: 318 KKTGNSDDIILAGPTCDSMDIMYQNKKYELPLSLEIGDHLYWLSTGAYTTSYSSIEFNGF 377 Query: 338 N 338 Sbjct: 378 P 378 >gi|294011486|ref|YP_003544946.1| diaminopimelate decarboxylase [Sphingobium japonicum UT26S] gi|292674816|dbj|BAI96334.1| diaminopimelate decarboxylase [Sphingobium japonicum UT26S] Length = 410 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 47/377 (12%), Positives = 104/377 (27%), Gaps = 35/377 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + A + L A+K + + + + +DG +S E Sbjct: 34 DTPLFVYDMGIVEGQARAFRDAMPAA-LSLHYAVKANPHALLLERMAKLVDGFDVASGGE 92 Query: 63 VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + E ++ +D E+ + + TI + + + A++ + L Sbjct: 93 LARALEAGMDAAHISFAGPGKRDDELIVAIDSGATINLESEGEARRAIALAERRGRTPKL 152 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKS-- 171 + + + K G + + + G + Sbjct: 153 AVRVNPDFDLKGSGMRMGGGAKPFGVDAERAAALARRVIEAGGEWRGWHIFAGSQALGAQ 212 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 +A + + ++LGGG + + + + + Sbjct: 213 ALIETQAATVDLAARLSEAVGAAPPLVNLGGGFGIPYFPGDERLDIRPIGDALGGMLDRR 272 Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------V 269 +E G +V T ++D+ ++ +V H V Sbjct: 273 ADILQDSAFAMELGRWLVGEAGVYLTRIVDVKKSQGETFVVVDGGLHHQLAASGNFGTVV 332 Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + + V G C D G+ PV+ GD ++ Y + Sbjct: 333 RRNYPIAVANRFGEASAEDAVTVVGCLCTPIDRLGDKVALPPVEEGDLVAIFLAGAYGAS 392 Query: 330 RKN-WFNGINMPTIAVK 345 F G P + Sbjct: 393 ASPAAFLGHPAPRELLI 409 >gi|152984562|ref|YP_001350471.1| ornithine decarboxylase [Pseudomonas aeruginosa PA7] gi|150959720|gb|ABR81745.1| ornithine decarboxylase [Pseudomonas aeruginosa PA7] Length = 387 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 117/361 (32%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID+Q + + D ++ A+K A + + L +S+YE Sbjct: 25 ETPFVVIDRQTIADAYDQLTDCF--PFARIYYAVKANPATEITELLRDKGSNFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + G E +Y K + ++ + L A + Sbjct: 83 LDKVLKTGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I + + G+ FH + + + A Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARQLGLEPYGISFHVGSQQRDISVWDA 199 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRL----KEFSEKYSV 227 + ++ F ++ I++GGG K ++ + + + KE Sbjct: 200 AIAKVKVIFERLKEEDGIVLKMINMGGGFPANYITKTNDLETYAEEIIRFLKEDFGDDLP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG +++ N L + V+ ++ + + + + Sbjct: 260 EIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYADVGKFSGLIETMDESIKFPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI ++ + GDR+ + Y + FNG Sbjct: 320 EKQGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLSSGDRLYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|170751044|ref|YP_001757304.1| ornithine decarboxylase [Methylobacterium radiotolerans JCM 2831] gi|170657566|gb|ACB26621.1| Ornithine decarboxylase [Methylobacterium radiotolerans JCM 2831] Length = 388 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 106/364 (29%), Gaps = 33/364 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N ++ A+K A + L + ++S+ E+ Sbjct: 21 PVMVLDLDVVRDNYTAFARSL--PDTRVFYAVKANPAPEVLRLLAEMGSCFDTASVAEME 78 Query: 65 LGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA---QKLHKKI 118 + + ++ K A+ + +++ K A +I Sbjct: 79 MVLAAGATADRISFGNTIKKERCIGRALKLGIRLFAVDCQAEVEKIARAAEAVDVPAGEI 138 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176 + + + + + G+ FH + + + Sbjct: 139 RVFCRILCDGVGADWPLSRKFGCVPEMAADVLEHAHRQGLEAYGISFHVGSQQGNTEAWD 198 Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----V 227 L + F + ++LGGG V+ + + + K+ Sbjct: 199 GALGSAAAVFRECAERGIGLSMVNLGGGFPTKYLKAVPGVESYGEAIFRGLTKHFGNQIP 258 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278 + +EPG +V N + V+ +S + + + + + Y Sbjct: 259 ETIIEPGRGMVGNAGLIEAEVVLVSRKSADADEVRWVYLDIGKFGGLAETMDEAIRYPIR 318 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-F 334 T ++ G +C + D+ E + IGD++ E Y F Sbjct: 319 -TARDGDATEPCVIAGPTCDSVDVLYERQLYPLPVSLSIGDKVLIEGAGAYTTTYAAVAF 377 Query: 335 NGIN 338 NG Sbjct: 378 NGFP 381 >gi|56695279|ref|YP_165627.1| decarboxylase, pyridoxal-dependent [Ruegeria pomeroyi DSS-3] gi|56677016|gb|AAV93682.1| decarboxylase, pyridoxal-dependent [Ruegeria pomeroyi DSS-3] Length = 393 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 113/362 (31%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +ID Q + AG + A+K + TL + ++S E+ Sbjct: 35 PTLVIDTQAVARQFAALAQGLGRAG--IHYAVKANPLPEILSTLARLGSNFDAASRVEIE 92 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L + ++ K A +F ++ K A K+ +R+ Sbjct: 93 LCLAAGASADRISFGNTVKKPADIAWAHAAGIALFAADAEDELDKIAAHAPGAKVYIRMI 152 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---MLK 180 + + L+ D S + GL FH + + + + Sbjct: 153 VEACQADWPLSRKFGCAPDKAIAVLDYARSVGLDPVGLSFHVGSQTRRAEMWVPVLDQVA 212 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYSV--QIYLEPGE 235 + + +++GGG P + ++ E++ QI EPG Sbjct: 213 AVWHAARAAGHDLSLLNIGGGFPAFYGQEVDAPELYAAEVIRLVGERFGDVGQIMAEPGR 272 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287 +V + VL +S + + S + + + + YQ T + Sbjct: 273 GMVAEAGAIAAEVLLVSRKSGHDLHRWVYLDIGKFSGLAETMDEAIRYQF-LTEREHEPT 331 Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343 ++ G SC + D+ E ++ GDRI + Y + FNG + Sbjct: 332 GPCILAGPSCDSADVLYEKKPVQLPLGLRDGDRIVIRNCGAYTSTYASVGFNGFPPLDVV 391 Query: 344 VK 345 Sbjct: 392 AI 393 >gi|328769068|gb|EGF79113.1| hypothetical protein BATDEDRAFT_35584 [Batrachochytrium dendrobatidis JAM81] Length = 468 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 57/404 (14%), Positives = 106/404 (26%), Gaps = 66/404 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D ++ + V+ A+KC + TL G +S E+ Sbjct: 63 PFFVADLGDVVRQHQQWKALLPR--VEPFYAIKCNPDPAILQTLAGLGTGFDCASKAEID 120 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E Y K C+ + + +K K K+ LRI Sbjct: 121 MVLEQGVDPSRIIYANPCKQASHIRHAGACNVKVMTFDNADELYKIKQAMPSAKMVLRIL 180 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S +V G+ FH FS + Sbjct: 181 TDDSRSVCRFGIKFGASLAAVPSLLRTARELDIDVIGISFHVGSGCYDASAFSEAVLLAR 240 Query: 184 KEFG---HFITQIEWISLGGGIH-FTDKDYPVKDFCQRLKEFSEKYSV---QIYLEPGEA 236 K F + +GGG + + D + L+ + ++ EPG Sbjct: 241 KAFDIGQALDFNFTLLDIGGGFPGRSTEGIQFTDVARLLRPVIDDNFPETVRVIAEPGRY 300 Query: 237 IVTNTTTLNTTVLDIS-------------------------------------------- 252 ++ TL + Sbjct: 301 FASSAFTLAVNIFARRVVLRDTIESTTASSEFGKDSPTTVSSQLSLDSECNPTNANEHPS 360 Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT------------GPYTAMVCGRSCLAG 300 + S D+ + + + ++ + G +C + Sbjct: 361 YMYYINDGMYGSFNCLTFDHAVVKAIPLVRQGEYLFDSPEVSDSMPQFSCSIWGPTCDSI 420 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 D G +KIGD + F ++ Y + + FNG T+ Sbjct: 421 DCIGRECLLPMMKIGDWLYFSNMGAYTMAAASAFNGFEKSTVLY 464 >gi|219119576|ref|XP_002180545.1| ornithine decarboxylase 2 [Phaeodactylum tricornutum CCAP 1055/1] gi|217408018|gb|EEC47953.1| ornithine decarboxylase 2 [Phaeodactylum tricornutum CCAP 1055/1] Length = 390 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 57/385 (14%), Positives = 125/385 (32%), Gaps = 56/385 (14%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D L++ + + V+ A+KC + TL +S E+ L Sbjct: 7 FYVVDIGVLVSQVYQWRRVFPR--VEPFYAVKCNPDPLIVKTLATLGCNFDCASRNEIRL 64 Query: 66 GHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIG 119 E + N + + ++ F+ ++ K ++ + + Sbjct: 65 VMEATKDMPTKPDIIYANPCKSRLGLLEAVCKGVKMVTFDNEMEVQKCASISKNIQLVLR 124 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLCFS 176 + + S + F K + + + K+ V G+ FH + + Sbjct: 125 IITDDRGS-----QCRLSSKFGAPRHKWRLLLAAAQKHGLQVVGVSFHVGSGCRDASRYE 179 Query: 177 AMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL-- 231 A LK+ + F G + ++ + +GGG + + E +++ Sbjct: 180 AALKDAREIFDLAGEYGMNMQVLDIGGGFPGETHRDGHFMYFTEIAEQVAPLIDEMFPPS 239 Query: 232 -----EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-----HVPDYL-------- 273 EPG V TL +V+ N N +++ ++P Sbjct: 240 VRIIGEPGRYFVAACATLCCSVIAARTNEMNSSFEPEAIDDKEAAENLPPLQDDYSYYIN 299 Query: 274 --LYQESATIYPNTGPYTAMV--------------CGRSCLAGDIFGEFHFEKPVKIGDR 317 +Y I + + G +C + D+ +K+GD Sbjct: 300 DGVYGAFNNIMFDHATVRPRILGPGEKIVATEEDVFGPTCDSIDVIARSVLLPKLKVGDY 359 Query: 318 ISFEDVAGYNINRKNWFNGINMPTI 342 + F+++ Y + + FNG P+ Sbjct: 360 MYFQNMGAYTMAAASSFNGFT-PSE 383 >gi|71908053|ref|YP_285640.1| Orn/DAP/Arg decarboxylase 2 [Dechloromonas aromatica RCB] gi|71847674|gb|AAZ47170.1| Orn/DAP/Arg decarboxylase 2 [Dechloromonas aromatica RCB] Length = 412 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 53/376 (14%), Positives = 108/376 (28%), Gaps = 34/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+Y D++ L + + AG+KL A+K + + +DG +S E Sbjct: 38 QTPFYAYDRELLRTRVRELKAVLP-AGIKLHYAMKANPMPALVAFMASLVDGIDVASGGE 96 Query: 63 VMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + + E +D E+ ++ I + +L+ + +L + Sbjct: 97 MKVALDAGGVPQEISFAGPGKRDAELRQAVAAGVLINVESFRELDLLARISTELGLPARV 156 Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 + + K + G + I + G +N Sbjct: 157 AVRVNPDFELKGSGMKMGGGPKQFGVDAEQVPLLLARIGELKLSFEGFHLFAGSQNLKPE 216 Query: 174 CFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + H + + +++LGGG + + + + + Sbjct: 217 SICEAQQKSYELALALSRHAPSPVRFLNLGGGFGIPYFPGERPLDLSSIGDNLAQLASRA 276 Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 + +E G +V + ++D + +V H Sbjct: 277 AQDFPLASLVIELGRYLVGEAGIYVSRIIDRKISRGQTYLVTDGGLNHHLSASGNFGQVI 336 Query: 273 -LLYQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 Y S N A V G C DI G+ GD + Y + Sbjct: 337 RKNYPVSIGNRMNAEDIEIATVVGPLCTPLDILGDRMALSVAMPGDLVVVFQSGAYGASA 396 Query: 331 KNW-FNGINMPTIAVK 345 F G T + Sbjct: 397 SPQSFLGHPEVTEVLV 412 >gi|325970023|ref|YP_004246214.1| ornithine decarboxylase [Spirochaeta sp. Buddy] gi|324025261|gb|ADY12020.1| Ornithine decarboxylase [Spirochaeta sp. Buddy] Length = 397 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 116/359 (32%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ LI + L K+ A+K A + L++ +S+YE Sbjct: 35 ETPFQLILSDVIEEKYQELLDAI--PFAKIYYAVKANPAPAVLSLLDRLGSNFDVASVYE 92 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E + + + + + + ++ L A + Sbjct: 93 LRRLQELGISADRMSCGNTIKKFEHIKEFYAAGIRLFVTDSEGDLRNIAMAAPGSKIMVR 152 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS--- 176 L + + + L+ L GL FH + + + Sbjct: 153 LMTEGAQTA-DWPLSRKFGCSPDLAGDLLILARKLGLQPWGLSFHVGSQQRDITAWDSAL 211 Query: 177 -AMLKNIEKEFGHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYS----VQI 229 + + ++ I++GGG T ++ PV+ + +K + E+ +I Sbjct: 212 SKVSYLFTWLLENEDLKLSCINMGGGFPATYRERTNPVQTYADEIKRYLEEDYGDILPEI 271 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 +EPG ++V ++ L + ++ IS + + + + Sbjct: 272 IIEPGRSLVGDSGVLVSEIVLISRKSRTALERWVYQDCGRFGGLMETLGEAIHYPILCER 331 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 GP ++ G +C + D E + + +GDR+ + Y + FNG Sbjct: 332 NGPLEQVILAGPTCDSMDTLYEDYRYELPLSLAVGDRLYWLSTGAYTSSYSAIEFNGFP 390 >gi|15599715|ref|NP_253209.1| ornithine decarboxylase [Pseudomonas aeruginosa PAO1] gi|107099896|ref|ZP_01363814.1| hypothetical protein PaerPA_01000917 [Pseudomonas aeruginosa PACS2] gi|116052549|ref|YP_792864.1| ornithine decarboxylase [Pseudomonas aeruginosa UCBPP-PA14] gi|218893611|ref|YP_002442480.1| ornithine decarboxylase [Pseudomonas aeruginosa LESB58] gi|254238823|ref|ZP_04932146.1| hypothetical protein PACG_04987 [Pseudomonas aeruginosa C3719] gi|254244669|ref|ZP_04937991.1| hypothetical protein PA2G_05538 [Pseudomonas aeruginosa 2192] gi|296391234|ref|ZP_06880709.1| ornithine decarboxylase [Pseudomonas aeruginosa PAb1] gi|313107163|ref|ZP_07793363.1| ornithine decarboxylase [Pseudomonas aeruginosa 39016] gi|9950761|gb|AAG07907.1|AE004866_1 ornithine decarboxylase [Pseudomonas aeruginosa PAO1] gi|115587770|gb|ABJ13785.1| putative ornithine decarboxylase [Pseudomonas aeruginosa UCBPP-PA14] gi|126170754|gb|EAZ56265.1| hypothetical protein PACG_04987 [Pseudomonas aeruginosa C3719] gi|126198047|gb|EAZ62110.1| hypothetical protein PA2G_05538 [Pseudomonas aeruginosa 2192] gi|218773839|emb|CAW29653.1| ornithine decarboxylase [Pseudomonas aeruginosa LESB58] gi|310879865|gb|EFQ38459.1| ornithine decarboxylase [Pseudomonas aeruginosa 39016] Length = 387 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 117/361 (32%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +IDKQ + + D ++ A+K A + + L +S+YE Sbjct: 25 ETPFVVIDKQTIADAYDQLTDCF--PFARIYYAVKANPATEITELLRDKGSNFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + G E +Y K + ++ + L A + Sbjct: 83 LDKVMKTGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I + + G+ FH + + + A Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARQLGLEPYGISFHVGSQQRDISVWDA 199 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRL----KEFSEKYSV 227 + ++ F ++ I++GGG K ++ + + + KE Sbjct: 200 AIAKVKVIFERLKEEDGIVLKMINMGGGFPANYITKTNDLETYAEEIIRFLKEDFGDDLP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG +++ N L + V+ ++ + + + + Sbjct: 260 EIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYADVGKFSGLIETMDESIKFPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI ++ + GDR+ + Y + FNG Sbjct: 320 EKQGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLASGDRLYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|302345615|ref|YP_003813968.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Prevotella melaninogenica ATCC 25845] gi|302149026|gb|ADK95288.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Prevotella melaninogenica ATCC 25845] Length = 395 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 67/388 (17%), Positives = 135/388 (34%), Gaps = 25/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP +++D+Q + +N+ K + ++K + + S Sbjct: 6 LHTPCFILDEQDVAHNICEFKTALSTYFAKSIIGYSVKTNSLPYILKIAKDNGCYAEVVS 65 Query: 60 LYEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 +E L + F + YN + + + T +++ D + + Sbjct: 66 YHEYQLALKVGFQKDHIIYNGPMKSKETFLDAIKHRAIVNIETWREVDWLDDLPKDQVYE 125 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 IG+RIN + S D SR G + ++ + G+ H + Sbjct: 126 IGIRININTSLVSPEDEDHPEDDSRFGFSFESGELDKVINLILKKNNIKIVGIHSHREPK 185 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFSEKY 225 +S + ++ +++ + +++ LGGG + Y + Sbjct: 186 TRSVRFYERVICYVQEIILKYNLSLKYWDLGGGFFGCMPNKPTYDEYSKAFFNALDVKLR 245 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 + +EPG AIV + V+DI ++ + + + + + Sbjct: 246 DITFIVEPGNAIVASGFDYVAEVIDIKDHDGKTYVCTDGTRNDIDPFFRKSDYFKEFCCQ 305 Query: 286 GPYTAM------VCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 G + V G +CL D +F E+ + IGDR+ F V Y ++ F Sbjct: 306 GDISVFSQLPQVVSGLTCLEYDRMFTIPAGERKLNIGDRVIFHRVGAYTMSLTPLFIHY- 364 Query: 339 MPTIAVKNVDGTIKAIREFSYND-YYNN 365 PTI +K+ G + IRE D + Sbjct: 365 FPTIYLKDSKGHLFVIREEWCEDEFIQK 392 >gi|66045821|ref|YP_235662.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae B728a] gi|63256528|gb|AAY37624.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae B728a] Length = 402 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 58/385 (15%), Positives = 121/385 (31%), Gaps = 35/385 (9%) Query: 2 IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 ++T P + D L ++ + AGV+L A+K + M +TL + G S Sbjct: 18 LETDPLAAFFYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76 Query: 59 SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 S E+ + + ++ D ++ + L N I +++++ + + A++ + Sbjct: 77 SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGR 136 Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + L E + + + G H Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHVHAMS 196 Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218 S +L + + + Q+ ++GGGI + + + C+ L Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALARDPSQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256 Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275 ++ + L EPG I VLD + +V Sbjct: 257 EKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQS 316 Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + I+ + P + G+ C D+ K V IGD + Y Sbjct: 317 HDHPVIHLPSTPQPAASSEQAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGY 376 Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352 N + F P+ ++ Sbjct: 377 NISHADFLCHPRPSQHFVRNGERVR 401 >gi|320535387|ref|ZP_08035501.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Treponema phagedenis F0421] gi|320147789|gb|EFW39291.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Treponema phagedenis F0421] Length = 389 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 110/363 (30%), Gaps = 29/363 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP +I+ +K+ N + + A+K + L +S Y Sbjct: 22 LQTPCVIINLEKIKKNYLELKQLF--PDADIYYAMKANPHEEILKLLIGLGANFDIASRY 79 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ E +Y K + A ++ L + + + Sbjct: 80 ELDKILSLGVPPECLSYGNTIKKAKDIAYFYEKGVRLFATDSKEDLKNLAKYSPQSRVFV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 + + + S + L+ + + G+ FH + + + Sbjct: 140 RILVENTNSA-DWPLSRKFGCHPDMAYDLCVLAKEMGLIPYGISFHVGSQQRDIGQWDDA 198 Query: 179 LKNIEKEFG----HFITQIEWISLGGGIHFTDKD------YPVKDFCQRLKEFSEKYSVQ 228 + + ++E I++GGG ++ + L + Sbjct: 199 IAKTKYLMRSLEEEEDIKLEMINMGGGFPAPYITPTNKLSEYAREITRYLDDDFGNEKPH 258 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYP 283 I LEPG ++V ++ L T ++ IS + + + + Sbjct: 259 IILEPGRSLVGDSGVLVTEIITISRKNNTALHRWVYVDAGVFNGLTETLNENIKYPIFTS 318 Query: 284 NT----GPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFN 335 ++ G +C + DI E + +K GDR+ F Y + + FN Sbjct: 319 KDESAGKWGEVVLAGPTCDSMDIMYEDYKYTMPISLKSGDRLYFLSTGAYTASYASVEFN 378 Query: 336 GIN 338 G Sbjct: 379 GFP 381 >gi|282801751|gb|ADB02854.1| AzicN [Kibdelosporangium sp. MJ126-NF4] Length = 396 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 31/382 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ D ++ N + V L +LK + + + S E Sbjct: 7 ETPAYVYDLAEVRANQTALVRALPEKSV-LYYSLKANPHPDLLAEIRKGGARAEVCSRGE 65 Query: 63 VMLGHEKFGG--ETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKA-QKLHKKI 118 + + +D ++ + ++V+ L++ A + + Sbjct: 66 LDAALAAGWPVDDVLYTGPGKRDQDLAYAIELGVRKFSVDSVTGLDQLDRVAAVQATEVR 125 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCENKS 171 L S+ G + + V+GL + + Sbjct: 126 CLLRINDDQPVPGQGLVMTGVASQFGADTSWVLAEPERFAGRPHVIVSGLHLYMGTNLAT 185 Query: 172 FLCFSAMLKNIEKE-------FGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220 A + + + LGGG + L Sbjct: 186 VDDLVAQFRRSLDTGIRLTEVLRQHGADMHMLDLGGGFGAPFARGGAAVDLAGLKDELDR 245 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + + + I E G +V TL TTVLD+ ++ V+V S H+ + Sbjct: 246 MLDGHDLFIAFESGRYLVGTAGTLYTTVLDVKQSHGKRVLVLDSGINHLGGMSGLRRLPP 305 Query: 281 IYP-----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-- 333 + P + AM+ G C D++ VK GD ++ +V Y + + Sbjct: 306 LVPDVLADHGELADAMLAGPLCTPLDLWARSAPVGEVKPGDVLAIPNVGAYGL-YASLVA 364 Query: 334 FNGINMPTIAVKNVDGTIKAIR 355 F G +P V + D + R Sbjct: 365 FLGHPLPVEVVVDGDAPPRISR 386 >gi|37677184|ref|NP_937580.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016] gi|37201729|dbj|BAC97550.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016] Length = 411 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 105/357 (29%), Gaps = 17/357 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P L+D + V L ALK + TL ++ EV Sbjct: 48 PLLLLDCDVIRQQYRALKNAL--PNVTLHYALKPLPHPVVVRTLLAEGASFDLATTGEVE 105 Query: 65 L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L E E + K +F + K KA + ++ +R++ Sbjct: 106 LVASEGVPAELTIHTHPIKRDADIRDALAYGCNVFVVDNLNELEKFKAYRDEVELLVRLS 165 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSAML 179 S + L+ + + + GL FH + NK Sbjct: 166 FRNSEAFADLSKKFGCSPEQALVIIETAKEWNIRIKGLSFHVGSQTTNPNKYVEAIHTCR 225 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQIYL--EPGE 235 +E+ + + + +GGG + P+ FC + E +++ EPG Sbjct: 226 HVMEQVVERGLPALSTLDIGGGFPVNYTQQVMPIDQFCAPINEALSLLPETVHVLAEPGR 285 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290 I T +V+ +E + S + D Y TI + Sbjct: 286 FICAPAVTSVASVMGQAEREGQIWYYLDDGIYGSFSGLMFDDARYPL-TTIKQGGELIPS 344 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 ++ G +C + D+ E + GD + + Y FN N Sbjct: 345 VLSGPTCDSVDVIAENILLPKLNNGDLVIGRTMGAYTSATATDFNFFKRAQTIALNE 401 >gi|1706324|sp|P49725|DCOR_PANRE RecName: Full=Ornithine decarboxylase; Short=ODC gi|758642|emb|CAA57683.1| ornithine decarboxylase [Panagrellus redivivus] gi|1200128|emb|CAA65024.1| ornithine decarboxylase [Panagrellus redivivus] Length = 435 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 56/386 (14%), Positives = 114/386 (29%), Gaps = 37/386 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ +++ ++ + V A+KC + TL G +S E+ Sbjct: 46 PFVVMNVSTIMAKVIQWQRTMPR--VAPCYAVKCNDDKVLLRTLADLGMGFDCASKAEIE 103 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 G E Y K A + F++V +L K K + + + Sbjct: 104 KVIGLVGPEKIVYANPCKTRGFIAHAEAAGVKRMTFDSVEELTKIKQNHADPSLILRISV 163 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + P + + + NV G+ FH F L+ Sbjct: 164 SDPTAQCQLGIKFGCDPETVAPKLLRKAA-DMGMNVIGISFHVGSGCNEPATFRTALEYA 222 Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDY-PVKDFCQRLKEFSEKYSV-------QIYL 231 F + + +GGG D + + + E+ ++ Sbjct: 223 RGLFDLGISLGLSMTLLDIGGGFPGVDTAHISLDACAAVINPALEELFPLDSCPDVEVIA 282 Query: 232 EPGEAIVTNTTTLNTTVL---------------DISENIKNLVIV---DSSVEAHVPDYL 273 EPG ++ T V+ D++ + + S + D+ Sbjct: 283 EPGRYFACAAVSVTTNVIASVKVPASRITEKADDVNRDGYMYYMNDGVYGSFNCKLFDHY 342 Query: 274 LYQESATIYPN--TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + + + V G +C D E + GD + + D+ Y Sbjct: 343 QPRGMPLAEHDADEPRFPVCVWGPTCDGLDQVEESSVMPRLYEGDWLYYPDMGAYTSVAA 402 Query: 332 NWFNGINMPTI-AVKNVDGTIKAIRE 356 + FNG + P + +R+ Sbjct: 403 STFNGFDKPKTYYFIDEATLGSIVRK 428 >gi|24586472|ref|NP_477052.2| ornithine decarboxylase 1 [Drosophila melanogaster] gi|62512165|sp|P40807|DCOR1_DROME RecName: Full=Ornithine decarboxylase 1; Short=ODC gi|7304113|gb|AAF59150.1| ornithine decarboxylase 1 [Drosophila melanogaster] gi|20151407|gb|AAM11063.1| GH13851p [Drosophila melanogaster] gi|220945166|gb|ACL85126.1| Odc1-PA [synthetic construct] gi|220954986|gb|ACL90036.1| Odc1-PA [synthetic construct] Length = 394 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 103/357 (28%), Gaps = 23/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + L + +K A+KC + L Q G +S EV L Sbjct: 33 LNICDLSSVERKLRLWQKLLPR--IKPFYAVKCNDDPMVVRLLAQLGAGFDCASKNEVKL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + ++ +K + + +R Sbjct: 91 VLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIVRFKS 150 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + + + +S V G FH + +K + Sbjct: 151 EAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAYDRAIKKAK 210 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237 F ++++ +GGG +D K ++ V I EPG Sbjct: 211 NLFKFGALLGYDMDFLDIGGGFPGSDDVKFEKIAESVNTSVQRHFPDERVHIIAEPGRFF 270 Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 V TL + E V S + D+ + + Sbjct: 271 VAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVIAEHYLDNAES 330 Query: 287 PY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 +++ G SC A D E + GD + F ++ Y + + FNG +P Sbjct: 331 LPHLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPK 387 >gi|330807503|ref|YP_004351965.1| diaminopimelate decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375611|gb|AEA66961.1| Putative ornithine decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 387 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 116/359 (32%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D + K+ A+K A + D L +S+YE Sbjct: 25 ETPFVVIDTAMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKDKGSNFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + G + +Y K ++ T S+ + ++ A+ Sbjct: 83 LDKVMSRGVGPDRISYGNTIKKSRDIRYFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + + I + + G+ FH + + + A + Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F ++ I++GGG ++ + LKE +I Sbjct: 202 AKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEI 261 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG +++ N L + V+ ++ + + + + Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWTEK 321 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 322 KGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380 >gi|225572465|ref|ZP_03781329.1| hypothetical protein RUMHYD_00762 [Blautia hydrogenotrophica DSM 10507] gi|225040102|gb|EEG50348.1| hypothetical protein RUMHYD_00762 [Blautia hydrogenotrophica DSM 10507] Length = 432 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 57/400 (14%), Positives = 131/400 (32%), Gaps = 54/400 (13%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +YL D++K+++++ ++ L ++KC + + +++ G ++S EV Sbjct: 28 FYLYDERKIVDSIRRLKQHF--PNIEFLYSIKCNSNPYVINSVFAQGLGADAASAGEVRK 85 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y+ A K E +I +++ ++ + + A+ + + + I Sbjct: 86 AVAAGQKKEKIYYSAAGKSMEDIESTMESAVLIADSIEEIKRIQFAAKHRNLVVEIGIRI 145 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL----C 174 + F S+ G ++ + +N V G+ H + + Sbjct: 146 NP---NFSFYKNEGMPSKFGIDEEEALAFLRENRFPNVRVTGIHVHLRSQELNTELLARY 202 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---------VKDFCQRLKEFSEKY 225 + +L+ + ++++++G G+ + E Sbjct: 203 YENVLELARRVQKVTDVSLDYVNMGAGMGIPYAVKDRALNLKELGQSVEAAVARFREEFP 262 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPD--------YLLYQ 276 ++ +E G +V T V+D + I+ +++ + Y Q Sbjct: 263 GIRAMIETGRHVVGKAGVYVTKVMDRKVSHAKTYIILKNTLNGFIRPSLACLVERYWQGQ 322 Query: 277 ESA----------------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 +S T+ + G C A DI E ++ GD + Sbjct: 323 QSPEGSEPLFTGTDAFQFLTLRERKPAERVDLVGNLCTATDIIAENLVMPRLECGDVVVI 382 Query: 321 EDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIREFSY 359 + Y F+ P N DG + E S+ Sbjct: 383 TNAGAYAAVLSPVQFSTQIRPIELFLNEDGNVV---EESF 419 >gi|225556784|gb|EEH05072.1| ornithine decarboxylase [Ajellomyces capsulatus G186AR] Length = 446 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 102/360 (28%), Gaps = 32/360 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + +G +S E+ Sbjct: 69 PFYIADLGQVYRQHVRWKKNLGR--VKPFYAVKCNPDPQVLRLMANLGNGFDCASKAEID 126 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 Y K S + +K K ++ LRI Sbjct: 127 CALGAGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPEAELYLRIL 186 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + + NV G+ FH + F +++ Sbjct: 187 TDDSASLCRLSMKFGASLSITRSLLELAKELKLNVIGVSFHVGSGAEDPRSFVKAVEDSR 246 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L E + +++ EPG V + Sbjct: 247 YVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLGDALDEHFPPH-IRVIAEPGRYYVAS 305 Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278 TL V+ I N + + H Sbjct: 306 AFTLAANVIARRDVSLEMSDSESTSSATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 + P + G +C D+ E + +G+ + FE++ Y FNG Sbjct: 366 ESPVC--TPIEYSIWGPTCDGIDLITERITLPGALDVGNWLYFENMGAYTKCSATCFNGF 423 >gi|154253672|ref|YP_001414496.1| Orn/DAP/Arg decarboxylase 2 [Parvibaculum lavamentivorans DS-1] gi|154157622|gb|ABS64839.1| Orn/DAP/Arg decarboxylase 2 [Parvibaculum lavamentivorans DS-1] Length = 433 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 45/368 (12%), Positives = 113/368 (30%), Gaps = 29/368 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P ++D + +N ++ A+K A + L ++S+ Sbjct: 71 LPSPCLVVDVDIVAHNFGELASSL--PDARIFYAVKANPADEIVSRLAGLGSSFDTASMG 128 Query: 62 EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ L + ++ + A F++ ++L+K A K+ Sbjct: 129 EIDLCLSHGVSADRLSFGNTIKKERDIAAAYAKGVRMFAFDSTAELDKIARVA--PGSKV 186 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 R+ +++ L+ + + ++ + G+ FH + + Sbjct: 187 YCRVLMECEGAEWPLSRKFGCEPAMAVDLLVRAKALGLDAYGVSFHVGSQQTDLTQYDKA 246 Query: 179 LKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQI 229 L F ++ +++GGG + + L + Sbjct: 247 LALSLSLFRDLEARGVKLRMVNMGGGFPSRYRTDVPSISAYGAAIREALLRHFGDSQPDV 306 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATI 281 +EPG +V + + V+ +SE + + + + + Y+ + Sbjct: 307 IVEPGRGVVGDAGVIQAEVVLVSEKGGDDARRWVYLDAGKFHGLAETMDEAIKYRLLTSR 366 Query: 282 YPNTGPYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 ++ G +C + DI ++ ++ GD++ Y FNG Sbjct: 367 DGGETS-PVVLAGPTCDSADILYEKTDYRLPSELEAGDKVWILATGAYTTTYSAVAFNGF 425 Query: 338 NMPTIAVK 345 Sbjct: 426 PPLASVCI 433 >gi|300785523|ref|YP_003765814.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] gi|299795037|gb|ADJ45412.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] Length = 427 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 59/394 (14%), Positives = 106/394 (26%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D L L R + GV + + K + L+ G SSL E Sbjct: 17 GTPLYLYDGDA-LRERYERLRERLHPGVDIFYSAKANPNVSVCALLHSLGAGLEISSLAE 75 Query: 63 VMLG-HEKF-GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 ++ G + E+ A TI+ + ++L + K+ Sbjct: 76 LVTAERAGATGPDVIFLGPGKSTEELRACCERGVGTIVCESFAELAAVDELRPPATVKVM 135 Query: 120 LRINPSVSYSKFI-----LADPNRPFSRLGEKCKDKIESE-IKNVNGLMFHNNCEN---- 169 LR+NP + + +D + + V G + Sbjct: 136 LRVNPESESAGSRLAMGGKPRQFGVDEEILRSSRDAVSALRHIRVTGFHAYLGTRILDAT 195 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC--------QRLKEF 221 +L+ E +E + +GGG D ++ F Sbjct: 196 TIVRNTGTILELAESLAELLDIPLETVDIGGGWGVPYFDGEDDLDADAAIEGINAAVESF 255 Query: 222 SEKYS-VQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESA 279 ++ ++ E G +V + E+ + VI D H+ + Sbjct: 256 LDRNPATRVITELGRYLVGWAGRYIVRARYVKESKGEWFVIADGGTNHHMAAVGIGSFVK 315 Query: 280 TIYPN--------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 +P V G C D+ + + V GD + Y + Sbjct: 316 RNFPIRALAGQDSPADRVYTVTGPLCTPNDVVAKRVWLPEVHPGDLLEVARSGAYGPSAS 375 Query: 332 N-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 F P + + D Sbjct: 376 PVMFLSHGHPAEVLLLGGTAHLVRSRDTVEDLLR 409 >gi|319789913|ref|YP_004151546.1| Orn/DAP/Arg decarboxylase 2 [Thermovibrio ammonificans HB-1] gi|317114415|gb|ADU96905.1| Orn/DAP/Arg decarboxylase 2 [Thermovibrio ammonificans HB-1] Length = 450 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 59/394 (14%), Positives = 118/394 (29%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ +++L N + V+ + K + L+ + S Sbjct: 48 GSPLFVFSEKRLRNKFRELKNAFTLRYPNVEFSWSYKTNYLDAICAILHSEGETAEVVSE 107 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 +E G YN YK + + I + ++ + A +L KI Sbjct: 108 FEYEKARRLGVPGNQIIYNGPYKPLDSLRRAAREGARINIDHFEEIADLEQVADELGTKI 167 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKC---KDKIESEIKNVNGLMFHNNCENKSFLCF 175 + I ++ G+ K + GL H + Sbjct: 168 KVGIRLNMDTGIKPQWSRFGFNLENGQALDAVKRIAAGGKLELVGLHCHIGTFILEPRAY 227 Query: 176 SAMLKNIEKEF----GHFITQIEWISLGGGIHFTD----------------KDYPVKDFC 215 ++ + + F +IE++ +GGG + ++ + Sbjct: 228 ENEVRKMVQFAYQVEEQFGFKIEYLDIGGGFPSKNRLKGVYLPPDVAVPSIDEFAERVCN 287 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL 274 L+ ++ LE G AIV L TTV V + + Sbjct: 288 ALLESLKPGDYPKLILESGRAIVDEAGFLITTVHASKRMPDGRRAYVLDAGVNILFTAFW 347 Query: 275 YQESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 Y + + ++ G C+ D+ + P+ G R+ V YN+ + Sbjct: 348 YHFNVELDREVQGPSEPCILYGPLCMNIDVVDDAVQLPPLPRGTRLILSPVGAYNVTQWM 407 Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNN 365 F P + + +G + IRE +D Sbjct: 408 QFIRY-RPAVVLIGENGEVDLIREAEDLSDIVRR 440 >gi|114778271|ref|ZP_01453130.1| probable ornithine decarboxylase [Mariprofundus ferrooxydans PV-1] gi|114551373|gb|EAU53929.1| probable ornithine decarboxylase [Mariprofundus ferrooxydans PV-1] Length = 414 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 120/359 (33%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ ++D++ + + + K+ A+K + L +S YE Sbjct: 51 ETPFVVLDRRIINEHYSELVDNFPY--AKIYYAIKANPDVEILSLLRDRGACFDVASTYE 108 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + +Y K C+ +F + ++ + ++ A++ Sbjct: 109 LDKVLGLGVSPDRCSYGNTIKKCKDIRYFYAKGIRLFASDAEAD-LRNIAREAPGAKVYI 167 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + I ++ + G+ FH + + + A + Sbjct: 168 RLLTEGSHTADWPLSRKFGCQTDMATNLLILAKELGLEPYGVSFHVGSQQRDIGAWDAAI 227 Query: 180 KNIEKEFG----HFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSE----KYSVQI 229 ++ F Q++ I++GGG + + + + + + +I Sbjct: 228 DKVKAIFDWLKTECDIQLKMINMGGGFPANYLTRTNDLPTYAKEITHYLHDDFGDDMPEI 287 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG ++ N L + V+ IS + + + + Sbjct: 288 ILEPGRSLCANAGVLVSEVVLISRKTTTSLHRWVYTDVGMFSGLIETLGEAIKYPIYTDR 347 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 +G +++ G SC + DI E H ++IGDR+ + Y + FNG Sbjct: 348 SGEREESVIAGPSCDSADIMYEDHKYGLPNSLEIGDRLYWFSTGAYTTSYSAIEFNGFP 406 >gi|121551083|gb|ABM55741.1| ornithine decarboxylase [Epichloe festucae] Length = 445 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 103/365 (28%), Gaps = 37/365 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D + + + VK A+KC + L + G +S E+ Sbjct: 64 FYVADLGDVYR--QHLRWKKNLPRVKPFYAVKCNPDPQVLHLLAELGTGFDCASKGEIEQ 121 Query: 66 GH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y K + + F+ +L K + + + Sbjct: 122 VLGMGTSPDRIIYAQPCKTNSYVRFVKSVGVKQMTFDNADELYKIAKLYPEAELFLRIMT 181 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + S + + + G NV G+ FH L F +++ Sbjct: 182 DDTSSLCRLSMKFGAAMDTTEGLLA--VARDLGLNVVGVSFHVGSGASDPLAFYKAVRDA 239 Query: 183 EKEF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 F + + +GGG T + + F + V I EPG V Sbjct: 240 HIVFQQGAELGHSLRTLDVGGGFCGDTFEQMAGVLREALDEFFPDGNKVDIIAEPGRYYV 299 Query: 239 TNTTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL---------- 273 + T+ V+ + N S + H Sbjct: 300 STAFTIACNVIARRTVEDPTLDGKGYMVYVNDGVYGNFSSIMFDHQQPVAKILRASGRTL 359 Query: 274 LYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINRKN 332 +A V G +C D E F+ + +GD + FED+ Y Sbjct: 360 YNSAAANPCSAGDGVEYSVWGPTCDGIDRISESVRFDSILDVGDWLYFEDMGAYTKCSAT 419 Query: 333 WFNGI 337 FNG Sbjct: 420 QFNGF 424 >gi|325981612|ref|YP_004294014.1| Ornithine decarboxylase [Nitrosomonas sp. AL212] gi|325531131|gb|ADZ25852.1| Ornithine decarboxylase [Nitrosomonas sp. AL212] Length = 390 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 110/359 (30%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ ++D + D + A+K A + L +S YE Sbjct: 28 ETPFLVVDLATIDRQYDEMSRHFPY--ARTYYAVKANPAPQILTLLKDKGACFDIASTYE 85 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + ++ ++ + L A Sbjct: 86 LDKVLALGVTPDRISFGNTIKKAKDIRTFYQKGVRMFATDSEADLRNIAKAAPGARIYTR 145 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + +++ + L+ S + + G+ FH + + + A L Sbjct: 146 ILTEGTLTA-DWPLSRKFGCESDMAMDLLILARDLGLDPYGVSFHVGSQQREIGAWDAAL 204 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F +++ I++GGG ++ + L E +I Sbjct: 205 GKVKVIFNRLWEEDRIKLKMINMGGGFPANYLQRTNELSIYAEEIARFLHEDFLDDMPEI 264 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 +EPG ++++N L + V+ IS + + + + Sbjct: 265 IIEPGRSMISNAGVLVSEVVLISRKSRTALHRWIYTDVGKFTGLIETLDESIKYPIYTEK 324 Query: 285 TGPYT-AMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G + A++ G +C + DI E + + GDR+ + Y + FNG Sbjct: 325 NGEFENAIIAGPTCDSADIMYENYKYGLPLNLAAGDRLYWLSTGAYTTTYSSVEFNGFP 383 >gi|163738946|ref|ZP_02146359.1| Ornithine decarboxylase [Phaeobacter gallaeciensis BS107] gi|161387751|gb|EDQ12107.1| Ornithine decarboxylase [Phaeobacter gallaeciensis BS107] Length = 391 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 112/362 (30%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +ID Q + ++ A+K + L + ++S E+ Sbjct: 33 PTLVIDSQAVARQYAALAQGLGR--ARIHYAVKANPEPQILRRLTRMGANFDAASRAEIE 90 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + K A F + K ++ +R+ Sbjct: 91 MCLAAGAKPSQITFGNTIKRPADIAFAHEIGITHFAVDALAELDKLADHAPGARVCIRLL 150 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + + + L+ + + D+ V+GL FH + + ++ L + Sbjct: 151 VEATGADWPLSRKFGCTAAMALTLMDRARDLDLCVSGLSFHVGSQTREPQMWADTLDQVA 210 Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYSVQ---IYLEPGE 235 + + ++ +++GGG + + Q + I EPG Sbjct: 211 QVWRAAKTAGHELTLLNIGGGFPASYGTEVMAPNRYAQEVMALVNARFPDASEIMAEPGR 270 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287 +V + VL +S + + S + + + + Y+ T + + Sbjct: 271 GLVAEAGAIAAEVLLVSRKDADDLHRWVYLDIGKFSGLAETMDEAIRYR-ITTEHGDGQT 329 Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343 ++ G SC + D+ E + +K GDR+ Y + FNG + Sbjct: 330 GPCILAGPSCDSADVLYEKQLYQMPLELKSGDRVVIHACGAYTTTYASVGFNGFPPLDVV 389 Query: 344 VK 345 V Sbjct: 390 VI 391 >gi|163741810|ref|ZP_02149200.1| decarboxylase, pyridoxal-dependent [Phaeobacter gallaeciensis 2.10] gi|161384983|gb|EDQ09362.1| decarboxylase, pyridoxal-dependent [Phaeobacter gallaeciensis 2.10] Length = 393 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 112/362 (30%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +ID Q + ++ A+K + L + ++S E+ Sbjct: 35 PTLVIDSQAVARQYAALAQGLGR--ARIHYAVKANPEPQILRRLTRMGANFDAASRAEIE 92 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + K A F + K ++ +R+ Sbjct: 93 MCLAAGAKPSQITFGNTIKRPADIAFAHEIGITHFAVDALAELDKLADHAPGARVCIRLL 152 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + + + L+ + + D+ V+GL FH + + ++ L + Sbjct: 153 VETTGADWPLSRKFGCTAAMALTLMDRARDLDLCVSGLSFHVGSQTREPQMWADTLDQVA 212 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYSVQ---IYLEPGE 235 + + ++ +++GGG + + Q + I EPG Sbjct: 213 QVWRTAKTAGHELTLLNIGGGFPASYGTEVMAPNRYAQEVMALVNARFPDASEIMAEPGR 272 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287 +V + VL +S + + S + + + + Y+ T + + Sbjct: 273 GLVAEAGAIAAEVLLVSRKDADDLHRWVYLDIGKFSGLAETMDEAIRYR-ITTEHGDGQT 331 Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343 ++ G SC + D+ E + +K GDR+ Y + FNG + Sbjct: 332 GPCILAGPSCDSADVLYEKQLYQMPLELKSGDRVVIHACGAYTTTYASVGFNGFPPLDVV 391 Query: 344 VK 345 V Sbjct: 392 VI 393 >gi|74141603|dbj|BAE38566.1| unnamed protein product [Mus musculus] Length = 461 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 61/373 (16%), Positives = 113/373 (30%), Gaps = 33/373 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L +++ V A+KC + + TL G + E+ L Sbjct: 40 FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCAXQTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++ + S++ K K+ LRI Sbjct: 98 VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + +V G+ FH F + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 F + + +GGG ++ + K F V+I EPG Sbjct: 218 VFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276 V + TL ++ V S + D+ + Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVK 337 Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P+ Y++ + G +C D E + +GD + FE++ Y + + F Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397 Query: 335 NGINMPTIAVKNV 347 NG P I Sbjct: 398 NGFQRPNIYYVMS 410 >gi|330973820|gb|EGH73886.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 402 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 59/385 (15%), Positives = 122/385 (31%), Gaps = 35/385 (9%) Query: 2 IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 ++T P + D L ++ + AGV+L A+K + M +TL + G S Sbjct: 18 LETDPLAAFFYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76 Query: 59 SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 S E+ + + ++ D ++ + L N I +++++ + + A++ + Sbjct: 77 SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGR 136 Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + L E + + + G H Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHVHAMS 196 Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218 S +L + + + Q+ ++GGGI + + + C+ L Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALARDPSQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256 Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275 ++ + L EPG I VLD + +V Sbjct: 257 EKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQS 316 Query: 276 QESATIYPNTGP-------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + I+ T P + + G+ C D+ K V IGD + Y Sbjct: 317 HDHPVIHLPTAPQSTDSSEHAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGY 376 Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352 N + F P+ ++ Sbjct: 377 NISHADFLCHPRPSQHFVRNGERVR 401 >gi|323136936|ref|ZP_08072016.1| Orn/DAP/Arg decarboxylase 2 [Methylocystis sp. ATCC 49242] gi|322397697|gb|EFY00219.1| Orn/DAP/Arg decarboxylase 2 [Methylocystis sp. ATCC 49242] Length = 381 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 102/358 (28%), Gaps = 28/358 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N ++ A+K A + L ++S+ E+ Sbjct: 21 PCLVVDLDVVRENYLGFAKAL--PDTRVFYAVKANPAPEVLSLLASLGSCFDTASVVEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ + A ++ +++ K A + Sbjct: 79 QTLAAGATPDRISFGNTIKKERDIARAYELGIRLFAVDSEAEVEKIARAAPGSKVFCRIL 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + P G + N G+ FH + + + LK+ Sbjct: 139 CDGAGAEWPLSRKFGCVPEMATG--VLEHAHRLGLNAYGVSFHVGSQQTNPRMWDGALKS 196 Query: 182 IEKEFG---HFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLE 232 F ++ ++LGGG + L + + +E Sbjct: 197 AADIFRDLAERGITLQMVNLGGGFPTKYLKNVPAVKQYGNAIFRALSKHFGNRIPETIIE 256 Query: 233 PGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 PG +V N + V+ IS+ + + + P G Sbjct: 257 PGRGMVGNAGIIEAEVVLISKKSEAEGELRWVYLDIGKFSGLAETIDEMIRYPIRTPADG 316 Query: 287 P--YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 ++ G SC + D+ E + ++IG ++ E Y FNG Sbjct: 317 APTSPCVIAGPSCDSVDVLYEKHPYDLPISLEIGAKVLIEGTGAYTTTYSAVGFNGFP 374 >gi|299068847|emb|CBJ40088.1| putative diaminopimelate decarboxylase protein (lysA) [Ralstonia solanacearum CMR15] Length = 413 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 56/377 (14%), Positives = 103/377 (27%), Gaps = 42/377 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 YL D L G +L A+K + + L+ + G +SL EV+ Sbjct: 19 AYLYDLDHLRERAARL-SAMLPPGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVVR 77 Query: 66 GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E + D A+ + I + QL + A ++ ++ + + Sbjct: 78 AREVGAHARIVFGGPGKTDDELQGALERGVELIHVESELQLRRLDAIACRMGRRARVLLR 137 Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 + + + + + V GL H Sbjct: 138 VNPNPLAADAGGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLARTLPGVEVVGLHLHALSN 197 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220 N L + ++ +++GGGI + + + FC L Sbjct: 198 NLDADSHLALMRHYLALALRLRREHGLTLDTLNVGGGIGVDYANPSHAFDWRRFCDGLGV 257 Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277 + +I E G I + T V+D+ N V H Sbjct: 258 LLAEAGAGCRIVFECGRFIAADCGYYVTEVVDLKRNHGQWFAVLRGGTHHFRLPASWQHN 317 Query: 278 SATIYPNTGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + +CG C D+ +++GDRI F+ Sbjct: 318 HPFAILPNARWDYSFERPSVQAQAVTLCGELCTPKDVLARDVVVDRLRVGDRIVFQLAGA 377 Query: 326 YNINRKNW-FNGINMPT 341 Y + + F P Sbjct: 378 YGWHISHHDFLSHPHPE 394 >gi|239834475|ref|ZP_04682803.1| Lysine/ornithine decarboxylase [Ochrobactrum intermedium LMG 3301] gi|239822538|gb|EEQ94107.1| Lysine/ornithine decarboxylase [Ochrobactrum intermedium LMG 3301] Length = 377 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 110/355 (30%), Gaps = 25/355 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + + ++ A+K A + L ++S+ E+ Sbjct: 18 PCLVVDTDVVRDNYLSFEKALPYS--RIFYAVKANPAPEILRLLASLGSCFDTASVAEIE 75 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E +Y K A ++ K ++ R+ Sbjct: 76 MALEAGATANRISYGNTIKKERDIARAFELGIRLYAVDCVEEVEKVARAAPGSRVFCRVL 135 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 +++ L+ + +S + G+ FH + + L + Sbjct: 136 TDGEGAEWPLSRKFGCVPAMAIDVLRHAKSLGLDSYGVSFHVGSQQTDLTAWDRALGDAA 195 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234 K F + +++GGG L + + +EPG Sbjct: 196 KVFRTLADEGIVLRMVNMGGGFPTRYLKDVPTAQAYGMVIFDALSKHFGNRIPETIIEPG 255 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTG 286 +V N + T V+ +S N + ++ + + + YQ T + + Sbjct: 256 RGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRYQ-IVTPHDGSE 314 Query: 287 PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 ++ G +C + D+ E + + IGD I E Y FNG Sbjct: 315 TEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAVAFNGF 369 >gi|194335990|ref|YP_002017784.1| Orn/DAP/Arg decarboxylase 2 [Pelodictyon phaeoclathratiforme BU-1] gi|194308467|gb|ACF43167.1| Orn/DAP/Arg decarboxylase 2 [Pelodictyon phaeoclathratiforme BU-1] Length = 379 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 59/372 (15%), Positives = 112/372 (30%), Gaps = 33/372 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +++D + L N V+ A+K +A + T +S+ E Sbjct: 14 GTPLFVVDHEVLRANYREFKRHLPR--VQAYFAVKANSAKEIVKTFYDAGASFDVASMPE 71 Query: 63 VMLGHEKFGG------------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 + +E + N + + + F+ ++ K Sbjct: 72 FLAVYENIKSLTPEEQQDFIWDKIIYANPIKPIPTLKELDQYKPLVTFDNEDEIAKIATY 131 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 A + + LRI + + L+ +K V GL FH + Sbjct: 132 A--PNTGLVLRIKVPNTGAMVELSSKFGADPGEAVDLIEKAFRSGLVVEGLSFHVGSQCT 189 Query: 171 SFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEK 224 +F + L F Q++ + +GGG P + L ++ Sbjct: 190 NFQNYIQALNLAANIFKESWERGYTQVKILDIGGGFPAPYDKNVRPFAELAIMLNSEIDR 249 Query: 225 YSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----VPDYLLYQ 276 I EPG +V + ++ + + H + D+ Y Sbjct: 250 LFPPDIEIIAEPGRFLVATAAWVVMEIIGTAYRDGKRCYYVNDGVYHTFSGIIFDHCEYP 309 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFN 335 + N V G +C A D + + IGD + E++ Y+ +FN Sbjct: 310 VKSFKEGNEK--MCAVYGPTCDALDTITMANLLPEDLSIGDLLYSENIGAYSHASSTYFN 367 Query: 336 GINMPTIAVKNV 347 G + N Sbjct: 368 GFPPAKVLHINR 379 >gi|91780468|ref|YP_555675.1| putative Orn/DAP/Arg decarboxylase [Burkholderia xenovorans LB400] gi|91693128|gb|ABE36325.1| Putative Orn/DAP/Arg decarboxylase [Burkholderia xenovorans LB400] Length = 402 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 47/375 (12%), Positives = 96/375 (25%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP++ D+ + + + AG+ L ++K + L Q +DG +S E+ Sbjct: 29 TPFFAYDRSAIDIRVRELRNLLP-AGMHLHYSIKANPMPAVIHHLAQRVDGFDVASAQEM 87 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + + K + + + +QL +L + + Sbjct: 88 ALALDAGTAPDAIGFAGPGKSHDDLRRAVASGINVHVESETQLRLVTALGWELGVQPSVA 147 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171 I + + G +E+ + G + Sbjct: 148 IRVNPDFQVGHSGMRMGGGAAPFGVDVDQVPALLRELEAREVALAGFHVFWGSQCLHAAT 207 Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-- 228 I + + +++LGGG + + E + + Sbjct: 208 IIKAQRQSADLILRLASGVPRPLRFVNLGGGFGIPYFPGETPLDVKAVCEAMQDWLPPLC 267 Query: 229 -------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-----LLYQ 276 LE G +V V+D + +V H + + Sbjct: 268 ERLPGTTPILELGRYLVGEAGIYVCRVIDRKVSRGRTFVVTDGGLHHHLAASGNFGQVLR 327 Query: 277 ESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + + P V G C D + IGD + Y + Sbjct: 328 RNFPVVIGNRPDGVPRERCHVVGCLCTPLDRLADEVELPEAHIGDFVVIMQSGAYGRSAS 387 Query: 332 N-WFNGINMPTIAVK 345 F P + Sbjct: 388 PVRFLSHPEPVEMLV 402 >gi|218671272|ref|ZP_03520942.1| diaminopimelate decarboxylase protein [Rhizobium etli GR56] Length = 309 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 77/270 (28%), Gaps = 20/270 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + A+K + + TL + G S Sbjct: 25 VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84 Query: 62 EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ A+ + + +L +A Sbjct: 85 ELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIYCFNVESEPELEILNQRAVSAGKKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + RINP V + ++ G + V G+ H + Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIYAHAAKLPGIEVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F K + I+ + +GGG+ KD + +K Sbjct: 205 TELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGLGVPYKDDNNPPPLPDAYAAIVKNQ 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 ++ EPG IV N L T VL + Sbjct: 265 LRDLDCKVITEPGRLIVGNAGILVTEVLYV 294 >gi|152149342|pdb|2PLJ|A Chain A, Crystal Structure Of LysineORNITHINE DECARBOXYLASE Complexed With Putrescine From Vibrio Vulnificus gi|152149343|pdb|2PLJ|B Chain B, Crystal Structure Of LysineORNITHINE DECARBOXYLASE Complexed With Putrescine From Vibrio Vulnificus gi|152149344|pdb|2PLK|A Chain A, Crystal Structure Of LysineORNITHINE DECARBOXYLASE Complexed With Cadaverine From Vibrio Vulnificus gi|152149345|pdb|2PLK|B Chain B, Crystal Structure Of LysineORNITHINE DECARBOXYLASE Complexed With Cadaverine From Vibrio Vulnificus Length = 419 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 58/357 (16%), Positives = 105/357 (29%), Gaps = 17/357 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P L+D + V L ALK + TL ++ EV Sbjct: 56 PLLLLDCDVIRQQYRALKNAL--PNVTLHYALKPLPHPVVVRTLLAEGASFDLATTGEVE 113 Query: 65 L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L E + + K +F + K KA + ++ +R++ Sbjct: 114 LVASEGVPADLTIHTHPIKRDADIRDALAYGCNVFVVDNLNELEKFKAYRDDVELLVRLS 173 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSAML 179 S + L+ + + + GL FH + NK Sbjct: 174 FRNSEAFADLSKKFGCSPEQALVIIETAKEWNIRIKGLSFHVGSQTTNPNKYVEAIHTCR 233 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQIYL--EPGE 235 +E+ + + + +GGG + P+ FC + E +++ EPG Sbjct: 234 HVMEQVVERGLPALSTLDIGGGFPVNYTQQVMPIDQFCAPINEALSLLPETVHVLAEPGR 293 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290 I T +V+ +E + S + D Y TI + Sbjct: 294 FICAPAVTSVASVMGQAEREGQIWYYLDDGIYGSFSGLMFDDARYPL-TTIKQGGELIPS 352 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 ++ G +C + D+ E + GD + + Y FN N Sbjct: 353 VLSGPTCDSVDVIAENILLPKLNNGDLVIGRTMGAYTSATATDFNFFKRAQTIALNE 409 >gi|27367421|ref|NP_762948.1| Ornithine decarboxylase [Vibrio vulnificus CMCP6] gi|27358990|gb|AAO07938.1| Ornithine decarboxylase [Vibrio vulnificus CMCP6] Length = 399 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 58/357 (16%), Positives = 105/357 (29%), Gaps = 17/357 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P L+D + V L ALK + TL ++ EV Sbjct: 36 PLLLLDCDVIRQQYRALKNAL--PNVTLHYALKPLPHPVVVRTLLAEGASFDLATTGEVE 93 Query: 65 L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L E + + K +F + K KA + ++ +R++ Sbjct: 94 LVASEGVPADLTIHTHPIKRDADIRDALAYGCNVFVVDNLNELEKFKAYRDDVELLVRLS 153 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSAML 179 S + L+ + + + GL FH + NK Sbjct: 154 FRNSEAFADLSKKFGCSPEQALVIIETAKEWNIRIKGLSFHVGSQTTNPNKYVEAIHTCR 213 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQIYL--EPGE 235 +E+ + + + +GGG + P+ FC + E +++ EPG Sbjct: 214 HVMEQVVERGLPALSTLDIGGGFPVNYTQQVMPIDQFCAPINEALSLLPETVHVLAEPGR 273 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290 I T +V+ +E + S + D Y TI + Sbjct: 274 FICAPAVTSVASVMGQAEREGQIWYYLDDGIYGSFSGLMFDDARYPL-TTIKQGGELIPS 332 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 ++ G +C + D+ E + GD + + Y FN N Sbjct: 333 VLSGPTCDSVDVIAENILLPKLNNGDLVIGRTMGAYTSATATDFNFFKRAQTIALNE 389 >gi|119499648|ref|XP_001266581.1| ornithine decarboxylase [Neosartorya fischeri NRRL 181] gi|119414746|gb|EAW24684.1| ornithine decarboxylase [Neosartorya fischeri NRRL 181] Length = 443 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 106/363 (29%), Gaps = 37/363 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D ++L V A+KC + L + G +S E+ Sbjct: 49 PFFVADLGQILRQHRRWQSNL--PNVHPFYAVKCNPDPTLLRLLAELGTGFDCASTEELR 106 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + K + + + + ++ LRI Sbjct: 107 VVLNLGVDPSRIIFANPCKSASSLLFAARTGVTLTTFDNLDELETIQTFLPTARLMLRIY 166 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + L + + + + V G+ FH + + +++ Sbjct: 167 ACDDDALIKLGEKFGAPIKSSFVLLQRAQELGLEVCGVSFHVGTGASNVSAYVNAIRHAH 226 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---YSVQIYLEPGEAI 237 F ++ + +GGG +D + Q ++ + QI EPG Sbjct: 227 MVFELGKSLGYDMDLLDIGGG----YQDSNFEKIAQSIRGTLMEAFPSRTQIIAEPGRYY 282 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSV----------------------EAHVPDYLLY 275 + TL +L +I + + +P Y Sbjct: 283 ARSAYTLVCKILSRRCHIAEAAQDRPDMLYQNDGVYGSFMNVLFEKEVVHPSLIPCSSPY 342 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWF 334 T GP+ + G +C + D + V++GD + + ++ Y + F Sbjct: 343 HLRNTKRVR-GPHHYSIWGPTCDSVDCVARESTLEAEVRVGDWLKYSNMGAYTMATSTQF 401 Query: 335 NGI 337 NG Sbjct: 402 NGF 404 >gi|229588356|ref|YP_002870475.1| putative ornithine decarboxylase [Pseudomonas fluorescens SBW25] gi|229360222|emb|CAY47079.1| putative ornithine decarboxylase [Pseudomonas fluorescens SBW25] Length = 387 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 114/359 (31%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D + K+ A+K A + D L +S+YE Sbjct: 25 ETPFVVIDTAMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKDKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + + +Y K + +F + ++ A+ Sbjct: 83 LDKVMDRGVSPDRISYGNTIKKSKDIRYFYEKGVRLF-STDSEADLRNIAKAAPGSKVYV 141 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + + I + + G+ FH + + + A + Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F ++ I++GGG ++ + LKE +I Sbjct: 202 AKVKVIFERLKEEDNIHLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEI 261 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG +++ N L + V+ ++ + + + + Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWTEK 321 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 322 KGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380 >gi|257482121|ref|ZP_05636162.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330987528|gb|EGH85631.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 387 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 114/361 (31%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D + K+ A+K A + + L +S+YE Sbjct: 25 ETPFVVIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + G E +Y K + ++ + L A + Sbjct: 83 LDKVMSCGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I + + G+ FH + + + A Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227 + ++ F ++ I++GGG ++ + LKE Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG ++++N L + V+ ++ + + + + Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|300693403|ref|YP_003749376.1| diaminopimelate decarboxylase protein (lysa) [Ralstonia solanacearum PSI07] gi|299075440|emb|CBJ34735.1| putative diaminopimelate decarboxylase protein (lysA) [Ralstonia solanacearum PSI07] Length = 413 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 57/377 (15%), Positives = 102/377 (27%), Gaps = 42/377 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 YL D L AG +L A+K + + L+ + G +SL EV+ Sbjct: 19 AYLYDLDHLRERARRL-SAMLPAGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVVR 77 Query: 66 GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E G + D A+ + I + QL + A+++ ++ + + Sbjct: 78 AREVGGHARIVFGGPGKTDDELQGALERGVELIHAESELQLRRLDAIARRMGRRARVLLR 137 Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 + + + + V GL H Sbjct: 138 VNPNPLSADAAGRRPEGTLTMGGQPTQFGIEEDAVPGLIRLARTLPGVEVVGLHLHALSN 197 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE- 223 N L + ++ +++GGGI +R + Sbjct: 198 NLDADSHLALMRHYLSLALRLHREHGLTLDTLNVGGGIGVDYAQPSHAFDWRRFCDGLGV 257 Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277 + +I E G I + T V+DI N V H Sbjct: 258 LLAEARAGCRIVFECGRFIAADCGYYVTEVVDIKRNHGKWFAVLRGGTHHFRLPASWQHN 317 Query: 278 SATIYPNTGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 ++ +CG C D+ + +GDRI F+ Sbjct: 318 HPFAVLPNAQWSYPFARPSVQAQAITLCGELCTPKDVLARDVVVDRLSVGDRIVFQLAGA 377 Query: 326 YNINRKNW-FNGINMPT 341 Y + + F P Sbjct: 378 YGWHISHHDFLSHPHPE 394 >gi|164688768|ref|ZP_02212796.1| hypothetical protein CLOBAR_02415 [Clostridium bartlettii DSM 16795] gi|164602244|gb|EDQ95709.1| hypothetical protein CLOBAR_02415 [Clostridium bartlettii DSM 16795] Length = 409 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 56/393 (14%), Positives = 122/393 (31%), Gaps = 46/393 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV- 63 P+Y+ D++ + + + + L ++K + ++Q G+ S+S EV Sbjct: 16 PFYIYDEKVIGDQIQELKTNFPE--FEFLYSIKTNPNKDVIKFISQNDIGSDSASKNEVF 73 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E Y+ A K + + I ++ +L + A++ + + + + Sbjct: 74 KSIDAGMPKEKIIYSSAGKTKQDIEETYDKCIITADSYHELEVINEVAKEHNIVLRVGVR 133 Query: 124 PSVS---YSKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFLCFSAML 179 + + IL + K+ I+S + G+ H + ++ Sbjct: 134 INSNYAIEGGDILPNKFGIDEESLLPHKEFIDSLKNIKICGIHVHLKSQILNYETLYNYY 193 Query: 180 ----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC--------QRLKEFSEKYSV 227 + +++++ GGG+ + + +KEF EK + Sbjct: 194 KDVLELAVFCVDEMGFDMDFVNFGGGLGVAYSQRENELEIESLGQKCRELIKEFKEKLNC 253 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLV------IVDSSVEAHVPDYLLYQESATI 281 ++ +E G IV + T T ++D + Y + Sbjct: 254 RLIIESGRFIVCKSGTYVTYIIDKKVSRGANYLIVANGYNGFHKTTLAEMVKGYAQGPLE 313 Query: 282 YPN--------------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 + VCG C A D+ G+ +IGD I+ Sbjct: 314 DIHAVEPLFTSYDAYEVKVLNKSQEKEEVTVCGNLCTAADLIGKNLVLPKAEIGDIIAIT 373 Query: 322 DVAGYNINRKN-WFNGINMPTIAVKNVDGTIKA 353 + Y F+ ++P N Sbjct: 374 NAGSYGFTLSPILFSSHDIPYEIYLNSKNQAII 406 >gi|312958927|ref|ZP_07773446.1| ornithine decarboxylase [Pseudomonas fluorescens WH6] gi|311286697|gb|EFQ65259.1| ornithine decarboxylase [Pseudomonas fluorescens WH6] Length = 387 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 112/361 (31%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D + K+ A+K A + D L +S+YE Sbjct: 25 ETPFVVIDTAMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKDKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + +Y K + ++ + L A Sbjct: 83 LDKVMDRGVSADRISYGNTIKKSKDIRYFYEKGVRLFSTDSEADLRNIAKAAPGSKVYGR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I + + G+ FH + + + A Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227 + ++ F ++ I++GGG ++ + LKE Sbjct: 200 AIAKVKVIFERLKEEDGIHLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG +++ N L + V+ ++ + + + + Sbjct: 260 EIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|296394573|ref|YP_003659457.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] gi|296181720|gb|ADG98626.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] Length = 421 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 108/366 (29%), Gaps = 35/366 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP ++D + + ++ A+K A + L +S+ E Sbjct: 52 ETPCLVVDLETVRERYCQLTAAL--PKARVYYAVKANPAAEVVRELAAAGSCFDVASVAE 109 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L Y A ++ + L + A Sbjct: 110 IELCLAAGANPRDLCYGNTIKKPADVAKAHALGVRLYTTDSETDLEALSEHAPGSSVFCR 169 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + F P L E + + G+ FH+ + + + + Sbjct: 170 IAAVHDGAVYSFGAKFGCAPE--LAESLLLRAGTLGLAAAGVSFHSGSQQLDPHAWRSGI 227 Query: 180 KN---IEKEFGHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYS-------V 227 + I ++ +++GGG+ + P+ D+ + ++ Sbjct: 228 AHAAQIAARLAAKGVRLPMLNIGGGLPGSYTHAAPPLADYADAISAAVREHFGAVGLHEP 287 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD------------YLLY 275 + LEPG +V + L + V+ +S V+A + L Sbjct: 288 LLVLEPGRYLVADAGLLRSEVVLVSRKSPADEHRWVYVDAGRYNGLTETEGECVAYVLAS 347 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN 332 E A + G +C D+ + + +++GD + F Y + + Sbjct: 348 PEHAGPAAAEDTAPVYLAGPTCDGDDVLYQRTVYRLPSALRVGDHLDFLSTGAYTASYAS 407 Query: 333 -WFNGI 337 FNG Sbjct: 408 IAFNGF 413 >gi|66047474|ref|YP_237315.1| ornithine decarboxylase [Pseudomonas syringae pv. syringae B728a] gi|302188823|ref|ZP_07265496.1| ornithine decarboxylase [Pseudomonas syringae pv. syringae 642] gi|63258181|gb|AAY39277.1| Ornithine decarboxylase [Pseudomonas syringae pv. syringae B728a] gi|330952898|gb|EGH53158.1| ornithine decarboxylase [Pseudomonas syringae Cit 7] gi|330969561|gb|EGH69627.1| ornithine decarboxylase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 387 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 115/361 (31%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D + K+ A+K A + + L + +S+YE Sbjct: 25 ETPFVVIDTDIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKEKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + G E +Y K + ++ + L A + Sbjct: 83 LDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I + + G+ FH + + + A Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227 + ++ F ++ I++GGG ++ + LKE Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG ++++N L + V+ ++ + + + + Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|269792190|ref|YP_003317094.1| Orn/DAP/Arg decarboxylase 2 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099825|gb|ACZ18812.1| Orn/DAP/Arg decarboxylase 2 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 392 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 119/365 (32%), Gaps = 22/365 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP ++D K++ A A+K + L++ +S+YE Sbjct: 30 ETPCLVMDMSKVIERYQEIDREMGFAKC--YYAVKANPHDEIIRELSKRGSCFDVASIYE 87 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + L E +Y K A + +F T + + K K+ R Sbjct: 88 LDQLLRLGVEPERISYGNTIKKARDVAYAYSKGVRVFATDCESDLRKIAENAPGSKVFYR 147 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I S + + L+ + GL FH + + + ++ Sbjct: 148 ILSDCSGADWPLSRKFGTHPDSIYRLIGLSTRLPVEPYGLSFHVGSQQRDIGQWGFLIST 207 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRL----KEFSEKYSVQIYLE 232 + F F ++ I+LGGG+ P+ + + KE + +I++E Sbjct: 208 CKYLFDSAREFNVDLKMINLGGGLPAQYLEPTAPLSLYASEILRFLKEDFGEKLPEIWIE 267 Query: 233 PGEAIVTNTTTLNTTVLDI-----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 PG +V + L + V+ I + + + + + GP Sbjct: 268 PGRGMVGDAGVLVSEVVMISKKSQTNPYSWVYLDAGKFGGLIETLDEAIKYPIYVDRRGP 327 Query: 288 -YTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTI 342 ++ G +C + DI ++ + GDR+ F Y + + FNG Sbjct: 328 SQKTILAGPTCDSVDILYEHFKYELPVSLSEGDRVYFLSAGAYTASYCSVNFNGFPPIKT 387 Query: 343 AVKNV 347 + Sbjct: 388 YIFEG 392 >gi|71734289|ref|YP_276391.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. phaseolicola 1448A] gi|289625475|ref|ZP_06458429.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648183|ref|ZP_06479526.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. aesculi str. 2250] gi|298488376|ref|ZP_07006407.1| Ornithine decarboxylase / Arginine decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554842|gb|AAZ34053.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157001|gb|EFH98090.1| Ornithine decarboxylase / Arginine decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322601|gb|EFW78694.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. glycinea str. B076] gi|320330144|gb|EFW86130.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. glycinea str. race 4] gi|330869021|gb|EGH03730.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330882340|gb|EGH16489.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. glycinea str. race 4] gi|330888738|gb|EGH21399.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. mori str. 301020] Length = 387 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 114/361 (31%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D + K+ A+K A + + L +S+YE Sbjct: 25 ETPFVVIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + G E +Y K + ++ + L A + Sbjct: 83 LDKVMSCGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I + + G+ FH + + + A Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227 + ++ F ++ I++GGG ++ + LKE Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG ++++N L + V+ ++ + + + + Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|302910029|ref|XP_003050202.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256731139|gb|EEU44489.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 448 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 100/363 (27%), Gaps = 33/363 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + + V+ A+KC + L + G +S E+ Sbjct: 67 FFVADLGEVYR--QHLRWKKNLPRVRPFYAVKCNPDTQIIKLLAELGTGFDCASKAEIEQ 124 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K + + +K ++ LRI Sbjct: 125 VLSLGLSPDRIIYAQPCKTNSYVRYVKTAGVKQMTFDNSDELYKIAKLYPGAELFLRIMT 184 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S + E + NV G+ FH L F +++ Sbjct: 185 DDSESMCRFSMKFGAAMETAEGLLALAKQLGLNVVGVSFHVGSGASDPLAFYKAVRDAHT 244 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F + + +GGG T + + F V I EPG V Sbjct: 245 VFQQARELGFNMRTLDVGGGFSGDTFETMAEVLREALDEFFPPGCGVDIMAEPGRYYVAT 304 Query: 241 TTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL----------LY 275 T+ ++ + N + V H Sbjct: 305 AFTIACNIIARRTVEDPTLDGKGYMVYVNDGVYGNFSNIVFDHQTPVAKILRASGKTLYE 364 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWF 334 SA P + G +C D E F+ + +GD + FED+ Y F Sbjct: 365 TPSAHPVPAGEGVEYSIWGPTCDGIDRVTESIRFDPILDVGDWLYFEDMGAYTKCSATQF 424 Query: 335 NGI 337 NG Sbjct: 425 NGF 427 >gi|70734359|ref|YP_257999.1| pyridoxal-dependent decarboxylase domain-containing protein [Pseudomonas fluorescens Pf-5] gi|68348658|gb|AAY96264.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain [Pseudomonas fluorescens Pf-5] Length = 387 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 120/359 (33%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID Q + D + K+ A+K A + D L++ +S+YE Sbjct: 25 ETPFVVIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLHEKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + +Y K + + ++ T S+ + ++ A+ Sbjct: 83 LDKVLGRGVNPANISYGNTIKKSKDIRYFYDKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + + I + + G+ FH + + + A + Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGVSFHVGSQQRDISVWDAAI 201 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F +++ I++GGG ++ + LKE +I Sbjct: 202 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEI 261 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG +++ N L + V+ ++ + + + + Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDESIKFPIWTEK 321 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 322 KGEVEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380 >gi|7021323|gb|AAF35284.1|AF179245_1 ornithine decarboxylase [Coccidioides posadasii] Length = 447 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 107/360 (29%), Gaps = 30/360 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ + VK A+KC + + +G +S E+ Sbjct: 71 PFYVADLGEVYR--QHIRWKMNLGRVKPFYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 128 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 Y K + + +K K + + LRI Sbjct: 129 YVLAAGSTPSRIIYAHPCKTKSYLRYAAQQGVNEMTFDNADELYKIKTMCPDRDVFLRIL 188 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + + NV G+ FH + F +++ Sbjct: 189 TDDSASLCRLSMKFGASLTVTRSLLELAKDLGLNVVGVSFHVGSGAEDQQHFVKAVEDAR 248 Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L + + +++ EPG V + Sbjct: 249 FVFDQASDIGHDLKVLDVGGGFCDETFERFAAALSDALDTYFPPH-IRVIAEPGRYYVAS 307 Query: 241 TTTLNTTVLDIS--------------ENIKNLVIVDSSVEAHVPDYLLYQESA------- 279 TL V+ ++ ++ + + + + Sbjct: 308 AFTLAANVIARRDVSPAASDSDSASGPAEMYMIYLNDGCYGNFSNIVFDHQHPVAQILTK 367 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP--VKIGDRISFEDVAGYNINRKNWFNGI 337 +T P + G +C D+ + + +G+ + FE++ Y FNG Sbjct: 368 DDMDSTHPVEYSIWGPTCDGIDVITKRVTLNREVLGVGNWLYFENMGAYTQCSATRFNGF 427 >gi|16118733|gb|AAL14568.1|AF416740_3 LysA [Erwinia chrysanthemi] Length = 411 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 49/375 (13%), Positives = 101/375 (26%), Gaps = 32/375 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D L ++ + GV+L A+K + + D + + G SS E+ Sbjct: 25 AFVYDLTALRQHVSEVMAALP-PGVELYYAIKANSEKPILDAIAPLVHGFEISSGGEIAR 83 Query: 66 GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + ++ A+ + + + ++ + + +A++ + I Sbjct: 84 VAGCGTRKPFVFSGPGKLDSDFDLALEQGVEAVHVESRHEIARLQQRARQHGVVQPVFIR 143 Query: 124 PSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + L + +D + + G H Sbjct: 144 VNPELASSLTSKLAMAGTPTPFGMDEADLADAVRDVDNASHLQLKGFHVHAMSHQMVVAR 203 Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225 +L + + I +++GGGI + + C L+ + Sbjct: 204 HQQLLDLYLTRWPQWKALSAHPQHITHLNVGGGIGVPYLTPERFDWPALCDYLRTRLAQQ 263 Query: 226 SVQIY--LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 EPG I VLD + +V + I+ Sbjct: 264 PDAPIVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVCRGGTHQFRLPVAQGHDHPVIH 323 Query: 283 -------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334 V G+ C ++ V IGD + Y N + F Sbjct: 324 LPLTSAPTTGETRDWTVVGQLCTPKNVLSRDQRLTDVNIGDLLVLPLAGAYGYNISHADF 383 Query: 335 NGINMPTIAVKNVDG 349 P DG Sbjct: 384 LCHPRPGQYFTTEDG 398 >gi|261856421|ref|YP_003263704.1| Orn/DAP/Arg decarboxylase 2 [Halothiobacillus neapolitanus c2] gi|261836890|gb|ACX96657.1| Orn/DAP/Arg decarboxylase 2 [Halothiobacillus neapolitanus c2] Length = 430 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 106/381 (27%), Gaps = 38/381 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ + + + + + L A+K + L++ +DG +SL E+ Sbjct: 51 TPAYVYHLAAIDQQVAVVRAVLP-SNLHLHYAIKANPNQRIIQHLSRQIDGFDCASLAEM 109 Query: 64 MLGHEKFGGETH---AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + A D E+ +S+ I + ++L + + A + ++ + Sbjct: 110 QQIIAIAPDKAAQASIAGPAKSDDELAFAISHGILINAESANELRRIQALAAQKKQRARV 169 Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDKI---------ESEIKNVNGLMFHNNCENK 170 + + K G +D S ++ G + +N+ Sbjct: 170 ALRINPPFEVKGSGMKMGGGARPFGIDSEDIPTLIRQWQAETSSWIDLEGFHLYTGSQNR 229 Query: 171 SF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS---- 222 F A + I + ++LGGG L+ Sbjct: 230 DATALGAGFRAAMDLIIELSQACDFTPRHLNLGGGFGVVYHPQDAPLDLAALQPALLEVS 289 Query: 223 -----EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------- 268 V++ LE G +V T ++D + ++ H Sbjct: 290 ATAQTHWPGVRLNLELGRYLVAGAGIYLTRIVDKKTSRGKTYLLCDGGMHHHLALSGNLG 349 Query: 269 -VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + + + G C D+ G+ + + D I Y Sbjct: 350 QILRRNWPIIAIDQLNAPCTHPFDLAGPLCTPLDVLGQNQELPELAVSDVIGVLQSGAYG 409 Query: 328 INRKNW-FNGINMPTIAVKNV 347 ++ F Sbjct: 410 LSASPNGFLSHPACGEYFLRD 430 >gi|218517060|ref|ZP_03513900.1| diaminopimelate decarboxylase protein [Rhizobium etli 8C-3] Length = 294 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 78/270 (28%), Gaps = 20/270 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + A+K + + TL + G S Sbjct: 25 VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84 Query: 62 EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ A+ + + +L +A Sbjct: 85 ELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIYCFNVESEPELEILNQRAVSAGKKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169 + RINP V + ++ G + V G+ H + Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIYAHAAKLPGIEVTGIDMHIGSQI 204 Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221 F K + I+ + +GGG+ KD + +K Sbjct: 205 TELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGLGVPYKDDNNPPPLPDAYAAIVKNQ 264 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 + ++ EPG IV N L T VL + Sbjct: 265 LRDLNCKVITEPGRLIVGNAGILVTEVLYV 294 >gi|148556930|ref|YP_001264512.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1] gi|148502120|gb|ABQ70374.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1] Length = 413 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 47/378 (12%), Positives = 95/378 (25%), Gaps = 35/378 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + + + GV L A+K + + +DG +S E Sbjct: 34 DTPLFVYDLAVVRDRIARFRAAFA--GVSLHYAVKANPHPPLVAAIAPLVDGIDVASAGE 91 Query: 63 VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 L ++ +D E+ + T+ + + + + + + L Sbjct: 92 AQLALDAGMDARRISFAGPGKRDRELAMAIEAGITLNLESEGEAERALAIGRGIGRTPRL 151 Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKS-- 171 + + K G + + V GL + Sbjct: 152 ALRINPDFELKGSGMKMGGGAKPFGVDAERAAPIIRRIVEAGADYRGLHIFAGSQALDAD 211 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---------KE 220 + L + ++LGGG + R+ + Sbjct: 212 ALVEAQRSALALAARVSVEAGVAPPHVNLGGGFGIPHFANDARLDESRVGGALSSALSRR 271 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY----- 275 + +E G +V T ++D + +V H Sbjct: 272 DPILAEAEFTIELGRWLVGEAGVYLTRIVDRKASHGETFLVVDGGLHHQLAASGNFGTVV 331 Query: 276 -QESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + V G C D G+ K+GD ++ Y + Sbjct: 332 RRNYPISLTKYSDSVKVEEVTVVGCLCTPIDRLGDHVGLPEAKVGDVVALYLAGAYGASA 391 Query: 331 KNW-FNGINMPTIAVKNV 347 F G P + Sbjct: 392 SPQAFLGHPSPLEITIDG 409 >gi|289675926|ref|ZP_06496816.1| ornithine decarboxylase [Pseudomonas syringae pv. syringae FF5] gi|330895459|gb|EGH27784.1| ornithine decarboxylase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330981896|gb|EGH79999.1| ornithine decarboxylase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 387 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 115/361 (31%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D + K+ A+K A + + L + +S+YE Sbjct: 25 ETPFVVIDTDIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKEKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + G E +Y K + ++ + L A + Sbjct: 83 LDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGSKVYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I + + G+ FH + + + A Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227 + ++ F ++ I++GGG ++ + LKE Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG ++++N L + V+ ++ + + + + Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|58038915|ref|YP_190879.1| ornithine decarboxylase [Gluconobacter oxydans 621H] gi|58001329|gb|AAW60223.1| Ornithine decarboxylase [Gluconobacter oxydans 621H] Length = 379 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 50/368 (13%), Positives = 104/368 (28%), Gaps = 30/368 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++D + + K+ A+K A + D L +S E+ Sbjct: 16 TPCLVVDLDVVGAHYRALHDALPE--AKIYYAIKANPAPAILDRLVALGSSFDVASPAEI 73 Query: 64 MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + +Y + +A +F+++ +L K A L Sbjct: 74 RMCLDAGATPDRISYGNTLKKAEWIREAHDLGISLFVFDSIEELEKLAKHAPGARVFCRL 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + + + + GL FH + + + Sbjct: 134 AVENEGADWPLSRKFGTTLSNARALMLR--ARDLGLKPYGLSFHVGSQQTGVAAYDHAIA 191 Query: 181 NIE---KEFGHFITQIEWISLGGGIHFTDK------DYPVKDFCQRLKEFSEKYSVQIYL 231 + ++ ++LGGG + L+ + +I L Sbjct: 192 KAAGLYHDLRAQGVDLQMLNLGGGFPTHYRENVPSVQDFADTIHASLRTHFPDGAPEILL 251 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---------DYLLYQESATIY 282 EPG +V + +++ V+ +S + + + Y + Sbjct: 252 EPGRYMVGQSGVVSSEVILVSRRGGAVTDPRWVYLDIGRFGGLAETEGEAIRYTFRTSRD 311 Query: 283 PNTGPY-TAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKN-WFNGI 337 + ++ G SC DI E + ++ GDR+ Y + FNG Sbjct: 312 SDDATCSPCVLAGPSCDGVDIMYEKNRIPLPDSLECGDRVEILATGAYVSTYASVGFNGF 371 Query: 338 NMPTIAVK 345 T Sbjct: 372 PPLTEYYI 379 >gi|255539090|ref|XP_002510610.1| ornithine decarboxylase, putative [Ricinus communis] gi|223551311|gb|EEF52797.1| ornithine decarboxylase, putative [Ricinus communis] Length = 416 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 112/363 (30%), Gaps = 26/363 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+++ + +DT R+ ++ A+KC + + L +S E+ Sbjct: 48 PFYVLNLGAVAELMDTW--SRQLPMIQPFYAVKCNSEPSLLGALAALGCNFDCASKVEIQ 105 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + Y K A + F++V +L+K + + L+ Sbjct: 106 TILSLGVSPDRIVYANPCKAESHLKYAASVGVNLTTFDSVYELDKISKLHPRCALLLRLK 165 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + L + E ++ V+G+ FH E+ + + + + Sbjct: 166 SPDDSAAKWASLGSKFGALPQEVEPLLRAAQAANLTVSGVSFHIGSESTNPNAYRTAIAS 225 Query: 182 IEKEFGHFI----TQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + F + +++GGG + F+E +++ EPG Sbjct: 226 AKAAFDTAGRLGMPPMTLLNVGGGFTAGSFFDEAATVINSALQDYFAEYPQLKVISEPGR 285 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVD---------SSVEAHVPDYLLY-----QESATI 281 TL +++ P L + Sbjct: 286 YFAETVFTLAASIIGKRVRDDVREYWLNDGVFGSFLCVAYGITPPACLPLALSSNRTNPT 345 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + + G +C + D E H ++ D + F ++ Y+ FNG + P Sbjct: 346 CEGAPTHMSTLFGPTCDSVDKIVEEHQLPELETNDWLVFPNMGAYSKVCATNFNGFS-PD 404 Query: 342 IAV 344 + Sbjct: 405 VVF 407 >gi|281357820|ref|ZP_06244306.1| Orn/DAP/Arg decarboxylase 2 [Victivallis vadensis ATCC BAA-548] gi|281315767|gb|EFA99794.1| Orn/DAP/Arg decarboxylase 2 [Victivallis vadensis ATCC BAA-548] Length = 388 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 113/367 (30%), Gaps = 26/367 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+ +++ + + L + ++ A+K A + + L +S YE Sbjct: 25 PTPFLVVNLNIVKMKYEELLQHFPFS--RIYYAVKANPATEVLELLRDLGSCFDIASRYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E +Y K ++ + L +A Sbjct: 83 LDRVLSLGIEPERVSYGNTIKKPADIRYFYEKGVRLFATDSEADLRNIAKEAPGARVFCR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + S + + L+ + G+ FH + + + + + Sbjct: 143 ILTEGSETA-DWPLSRKFGCHPDMAIDLVLLARELGLQPWGISFHVGSQQRDIGAWDSAI 201 Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + F + ++ I++GGG + + L+E +I Sbjct: 202 AKVRYIFDYLEGEGLKLSMINMGGGFPANYISKTNEMNVYSEEITRYLEEDFGDDFPEII 261 Query: 231 LEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 LEPG ++V L + V+ IS+ K L + + + + Sbjct: 262 LEPGRSLVGECGILVSEVVLISQKSSMGVDKWLYLDTGKFNGLIETWDESIKYPLYCEAR 321 Query: 286 GP--YTAMVCGRSCLAGDIFGEFHF---EKPVKIGDRISFEDVAGYNINRKN-WFNGINM 339 G ++ G +C + DI E+ +K GDRI + Y + + FNG Sbjct: 322 GEPCEDFIIAGPTCDSQDIMYEYFRNPVPAYIKPGDRIYWLSTGAYTSSYCSVEFNGFPP 381 Query: 340 PTIAVKN 346 + Sbjct: 382 LPVYFVK 388 >gi|82703782|ref|YP_413348.1| Orn/DAP/Arg decarboxylase 2 [Nitrosospira multiformis ATCC 25196] gi|82411847|gb|ABB75956.1| Orn/DAP/Arg decarboxylase 2 [Nitrosospira multiformis ATCC 25196] Length = 410 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 45/376 (11%), Positives = 104/376 (27%), Gaps = 34/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+Y D+Q+L + + A + L A+K + + + +DG +S E Sbjct: 36 KTPFYAYDRQRLTDRVAFLRQHLP-AEIHLHYAMKANPMPAVVQHMARLVDGLDVASAGE 94 Query: 63 VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + + ++ D E+ ++ + + ++ + + L + + Sbjct: 95 MKVALDTPMPPGEISFAGPGKSDSELSCAIAAGIVLNMESEQEMERIAILGEYLGVRPKV 154 Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKDK------IESEIKNVNGLMFHNNCENKSF- 172 + + + + + G + + + G + +N Sbjct: 155 AVRVNPDFELKSSSMKMGGGPKQFGVDAERVPAMLARLGRLALDFEGFHIFSGSQNLRVA 214 Query: 173 ---LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + H + +++GGG + E + Sbjct: 215 ALQEAHEKTFQLGIALAKHAPAPVRMLNIGGGFGTPYFPGDEALDLAAVGENLRRLIPGV 274 Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 +I +E G +V VL+ E+ + ++ H Sbjct: 275 RQALPEARIVIELGRYLVAEAGIYVCRVLERKESRGQIFLITDGGLHHHLAASGNFGQVI 334 Query: 273 -LLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 Y + V G C D+ + + GD I Y + Sbjct: 335 RKNYPVMVGNRVQGTDREVVSVVGPLCTPLDLLADRMEMSRAEAGDLIVVFQSGAYGLTA 394 Query: 331 KNW-FNGINMPTIAVK 345 F P + Sbjct: 395 SPTAFLSHPPPMEMLV 410 >gi|224085964|ref|XP_002307756.1| predicted protein [Populus trichocarpa] gi|222857205|gb|EEE94752.1| predicted protein [Populus trichocarpa] Length = 416 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 109/362 (30%), Gaps = 26/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++ +D ++ V A+KC + +L +S E+ Sbjct: 49 PFYVLDLGEVTALMD--KWLMTLPMVHPFYAVKCNPDPALLGSLAALGSNFDCASRAEIE 106 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 Y K A + F++ +L+K + K I ++ Sbjct: 107 SVLSLGVSPNRIVYANPCKQESHIKYAASVGVNLTTFDSKEELDKIRKWHSKCALLIRIK 166 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + ++ NV G+ FH + + + Sbjct: 167 APDDSGARCPLGPKY-GALPDEVTPLLQAAQTAQLNVVGVSFHIGSGATRSRAYEGAIAS 225 Query: 182 IEKEFGH----FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + F + ++ +++GGG + F + + + EPG Sbjct: 226 AKSVFEAAVRLGMPGMKILNIGGGFTAGSQFDEAATTIKSALQAYFPNEPGLTVISEPGR 285 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP--- 287 + TL T ++ S+ + D+ + + Sbjct: 286 FFAESAFTLATNIIGKRVRGDLREYWINDGIYGSMNCILYDHATITCTPLACNSNHANLT 345 Query: 288 ------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 Y++ V G +C A D H ++I D + F ++ Y + FNG N Sbjct: 346 CKGLRAYSSTVFGPTCDALDTVLTGHQLPELQINDWLVFPNMGAYTAAAGSSFNGFNTAA 405 Query: 342 IA 343 I Sbjct: 406 IL 407 >gi|240281644|gb|EER45147.1| ornithine decarboxylase [Ajellomyces capsulatus H143] Length = 446 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 102/360 (28%), Gaps = 32/360 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + +G +S E+ Sbjct: 69 PFYIADLGQVYRQHVRWKKNLGR--VKPFYAVKCNPDPQVLRLMANLGNGFDCASKAEID 126 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 Y K S + +K K ++ LRI Sbjct: 127 CALGAGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPEAELYLRIL 186 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + + NV G+ FH + F +++ Sbjct: 187 TDDSASLCRLSMKFGASLSITRSLLELAKELKLNVIGVSFHVGSGAEDPRSFVKAVEDSR 246 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L E + +++ EPG V + Sbjct: 247 YVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLGDALDEHFPPH-IRVIAEPGRYYVAS 305 Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278 TL V+ I N + + H Sbjct: 306 AFTLAANVIARRDVSLEMSDSDSTSSATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 + P + G +C D+ E + +G+ + FE++ Y FNG Sbjct: 366 ESPVC--TPIEYSIWGPTCDGIDLITERITLPGALDVGNWLYFENMGAYTKCSATCFNGF 423 >gi|217969813|ref|YP_002355047.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Thauera sp. MZ1T] gi|217507140|gb|ACK54151.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Thauera sp. MZ1T] Length = 415 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 49/375 (13%), Positives = 99/375 (26%), Gaps = 35/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y D+ + + ++L A+K + L + +DG +S E+ Sbjct: 41 TPFYAYDRGAIARRVAELRAALP-PAIELHYAMKANPMPALVGHLARLVDGIDVASAGEL 99 Query: 64 MLGHEKFGGETHAY--NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + H +D E+ ++ + + ++ + A L + Sbjct: 100 QVALDAGADPQHVSFAGPGKRDTELRQAVAAGILVNVESFREIAPLAEAAAALGVPARVA 159 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK---- 170 + + K G + I G +N Sbjct: 160 VRVNPDFELKSSGMKMGGGPKPFGVDAEQVPGLLAEISRAGLAFEGFHLFAGSQNLKAEA 219 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYS 226 + + H + ++LGGG + L + + + Sbjct: 220 IVEAQRKSFELALRLAAHAPAPVRTLNLGGGFGIPYFPGEQALDLTPIAAGLADIVAEAA 279 Query: 227 V-----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VP 270 +I LE G +V + DI + + +V H + Sbjct: 280 QALPEARIVLELGRYLVGEAGVYVCRITDIKVSRGHTYLVTDGGLHHHLSASGNFGQVIR 339 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + A V G C D+ + +IGD I Y + Sbjct: 340 KNYPVAIGNRMDAPPAGEPASVVGPLCTPLDVIADRMPLPAAQIGDLIVVFQSGAYGASA 399 Query: 331 KNW-FNGINMPTIAV 344 F G + Sbjct: 400 SPQAFLGHPQVVEIL 414 >gi|254477427|ref|ZP_05090813.1| Orn/DAP/Arg decarboxylases family 2 [Ruegeria sp. R11] gi|214031670|gb|EEB72505.1| Orn/DAP/Arg decarboxylases family 2 [Ruegeria sp. R11] Length = 395 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 114/362 (31%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D Q + ++ A+K A + L + ++S E+ Sbjct: 37 PTLVVDSQAVARQYAALAQGLGR--ARIHYAVKANPAPQILRRLTRMGANFDAASRAEIE 94 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L + K A F + K + +R+ Sbjct: 95 LCLAAGAKPAQITFGNTIKRPADIAFAHEIGITHFAADATAELEKLAQHAPGAHVCIRLL 154 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS---AMLK 180 + + + L+ + + D+ V+GL FH + + ++ + Sbjct: 155 VEATGADWPLSRKFGCSAAMALSLMDEARDLGLEVSGLSFHVGSQTREPQMWADTLDQVA 214 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYSV--QIYLEPGE 235 + K + +++GGG + P + + ++ + ++ +I EPG Sbjct: 215 AVWKAAKDAGHGLRLLNIGGGFPASYGTEVMAPNQYAREVMELVNARFPDAAEIMAEPGR 274 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287 +V + VL +S + + S + + + + Y+ T + Sbjct: 275 GLVAEAGAIAAEVLLVSRKDADDLHRWVYLDIGKFSGLAETMDEAIRYR-ITTDHGEAQT 333 Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343 ++ G SC + D+ E + +K GDR+ Y FNG + Sbjct: 334 GPCILAGPSCDSADVLYEKQLYQLPLALKAGDRVVIHACGAYTSTYSTVGFNGFPPLDVV 393 Query: 344 VK 345 V Sbjct: 394 VI 395 >gi|331019663|gb|EGH99719.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 402 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 61/377 (16%), Positives = 122/377 (32%), Gaps = 32/377 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D L ++ + AGV+L A+K + M +TL + G SS E+ Sbjct: 25 AFIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83 Query: 66 GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--HKKIGLR 121 + + ++ D ++ + L N + +++++ + + A++ + + +R Sbjct: 84 VMACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEEAGRVQPVFIR 143 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLC 174 INP + ++ + G D E+ + G H S Sbjct: 144 INPQLPAAQSSKLAMAGTATPFGIDEADLAEAVRLVDSATHLTLKGFHVHAMSHQMSVER 203 Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225 +L + + + Q+ ++GGGI + + + + L++ + Sbjct: 204 HEQLLDFYLQRWQAWKALARHPEQLTHFNVGGGIGVDYLNSQQFDWQRLFRYLEKRLGEQ 263 Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 L EPG I VLD + +V + I+ Sbjct: 264 PDSPILRFEPGRFISAYCGYYVIEVLDRKTSHGEHFLVCRGGTHQFRLPVAQSHDHPVIH 323 Query: 283 PNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334 + P T V G+ C D+ K V IGD + Y N + F Sbjct: 324 LPSVPPTAASPEQAYTVVGQLCTPKDVLSRRQPFKDVNIGDLLVLPMAGAYGYNISHADF 383 Query: 335 NGINMPTIAVKNVDGTI 351 P + Sbjct: 384 LCHPRPPQHFVRNGERV 400 >gi|258566646|ref|XP_002584067.1| predicted protein [Uncinocarpus reesii 1704] gi|237905513|gb|EEP79914.1| predicted protein [Uncinocarpus reesii 1704] Length = 493 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 107/370 (28%), Gaps = 40/370 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D++ + + L V+ A+KC + L ++ G +S E+ Sbjct: 40 FYVVDEEFIHSQLRMWASKFG--HVQPFYAVKCNDNPRLLSILAKHGTGFDCASQSEIKR 97 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + Y K + A +F++ +L K ++ LR+ Sbjct: 98 ILDLGVKPDRILYAAPIKSEDHILYAKEHGVVQTMFDSEDELRKLVKL--FPPAQLYLRL 155 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC-------ENKSFLCF 175 S+ L D ++ V GL FH ++ Sbjct: 156 WADDPTSRVRLCDKFGVQLPQAKRLLTLARELNMTVVGLCFHVGSSASDCDAYRRAIALS 215 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPG 234 + E I I +GGG + D V+ + ++E ++ EPG Sbjct: 216 REVYDYNESFGADKRHPIRTIDVGGGFSRGNFDNAVRAINEGIQEHFGADNQLRWVAEPG 275 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES---------------- 278 L V+ V D + Sbjct: 276 RYFPDEAFHLVCRVIGTRPRPSLSDEPPPGEAFPVGDVYINDGIYRNFLNAITEQVVPPA 335 Query: 279 --------ATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNIN 329 + + T ++ G++C + D + K+GD + F + Y Sbjct: 336 RLLDCTGSPYVRGDDTEDTYVLWGQTCDSFDKINSSCVLPRRAKVGDWVYFPSMGAYTHV 395 Query: 330 RKNWFNGINM 339 N FNG Sbjct: 396 TANDFNGFPK 405 >gi|85374200|ref|YP_458262.1| ornithine/diaminopimelate/arginine decarboxylase,family protein [Erythrobacter litoralis HTCC2594] gi|84787283|gb|ABC63465.1| ornithine/diaminopimelate/arginine decarboxylase,family 2 [Erythrobacter litoralis HTCC2594] Length = 420 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 42/376 (11%), Positives = 105/376 (27%), Gaps = 34/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + + + + + A+K + + + ++G +S E Sbjct: 46 GTPLFVYSRDIIAGTMRHLREAMPER-LHINYAIKANSHPEVLAFMADLVEGYDIASGGE 104 Query: 63 VMLG-HEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + ++ +D E++A + T+ + + + + A++L + L Sbjct: 105 LEKIQAAGIDTRRVSFAGPGKRDRELEAAIEAGVTLNLESEGEARRALEIAERLGQTPRL 164 Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKDKIESEIKNV------NGLMFHNNCENK--- 170 I + + ++ G + + + GL + + Sbjct: 165 AIRVNPDFDMKGSGMKMGGGAKPFGIDAERVPALGSEIIAAGGEWRGLHIYTGSQALSAE 224 Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + +L +K + +++GGG + + E+ Sbjct: 225 AIIETQANVLALADKIASEMGEALPKLNMGGGFGIPYFHGDEPLDIEAIGSALEERFGDL 284 Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 + +E G +V ++D + +V H Sbjct: 285 PETLADAHLCIELGRYLVGLAGVYLCRIVDRKVSHGETFLVTDGGLHHQLAASGNFGTVV 344 Query: 273 -LLYQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 Y + + P V G C D + F +GD ++ Y + Sbjct: 345 RRNYPAAIATRFDAPPVEVQHVVGCLCTPLDRLSDKAFLPRADVGDIVAIFCAGAYGASA 404 Query: 331 KN-WFNGINMPTIAVK 345 F G + Sbjct: 405 SPAEFLGQGPAREVLV 420 >gi|325087796|gb|EGC41106.1| ornithine decarboxylase [Ajellomyces capsulatus H88] Length = 446 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 102/360 (28%), Gaps = 32/360 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + +G +S E+ Sbjct: 69 PFYIADLGQVYRQHVRWKKNLGR--VKPFYAVKCNPDPQVLRLMANLGNGFDCASKAEID 126 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 Y K S + +K K ++ LRI Sbjct: 127 CALGAGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPEAELYLRIL 186 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + + NV G+ FH + F +++ Sbjct: 187 TDDSASLCRLSMKFGASLSITRSLLELAKELKLNVIGVSFHVGSGAEDPRSFVKAVEDSR 246 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L E + +++ EPG V + Sbjct: 247 YVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLGDALDEHFPPH-IRVIAEPGRYYVAS 305 Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278 TL V+ I N + + H Sbjct: 306 AFTLAANVIARRDVSLEMSDSDSTSSATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 + P + G +C D+ E + +G+ + FE++ Y FNG Sbjct: 366 ESPVC--TPIEYSIWGPTCDGIDLITERITLPGALDVGNWLYFENMGAYTKCSATCFNGF 423 >gi|257093227|ref|YP_003166868.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045751|gb|ACV34939.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 401 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 46/376 (12%), Positives = 98/376 (26%), Gaps = 34/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+Y D+Q L + + +KL A+K + + +DG +S E Sbjct: 27 QTPFYAYDRQLLTRRVALLRAALPAS-LKLHYAMKANPMPALVCHMAGLVDGIDVASAGE 85 Query: 63 VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + ++ + E+ ++ I + ++ + + + + Sbjct: 86 LKVALDAGANPREISFAGPGKRRAELSQAVAAGILINIESFREVAELAAISHETGCAGRV 145 Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF- 172 + + K + G + I G +N Sbjct: 146 AVRVNPDFELKSSGMKMGGGARQFGVDAEQVPDLLTEIGRYGLAFEGFHLFAGSQNLRPE 205 Query: 173 ---LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---------KE 220 + + G + +++LGGG + + Sbjct: 206 AIAEAQIKSFELALRLAGSAPAPVRFLNLGGGFGIPYFPGEQHLELAPIGANLSGIVERA 265 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 E + ++ +E G +V T +LD + +V H Sbjct: 266 ARELPAAELVIELGRYLVGEAGLYVTRILDRKTSRGQTFLVTDGGLHHHLSASGNFGQVI 325 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 T V G C D+ E + GD + Y + Sbjct: 326 RKNYPVAIGNRMIPARLETVSVVGPLCTPLDLLAERMELAEAQAGDLVVVHQSGAYGMTA 385 Query: 331 KNW-FNGINMPTIAVK 345 F G + Sbjct: 386 SPQAFLGHPACVEILV 401 >gi|163758927|ref|ZP_02166014.1| putative ornithine, dap, or arginine decarboxylase protein [Hoeflea phototrophica DFL-43] gi|162284217|gb|EDQ34501.1| putative ornithine, dap, or arginine decarboxylase protein [Hoeflea phototrophica DFL-43] Length = 377 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 102/359 (28%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + + A+K A + L +S+ E+ Sbjct: 18 PCLVVDLDVVRDNFVSFRKAL--PDSSIYYAVKANPAPEILRLLAGLGSNFDCASVAEIE 75 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + +Y + A ++ ++ K A + Sbjct: 76 MALKAGATSARVSYGNTIKKERDIARAHALGVTLFAVDSHEEVEKIARAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179 + + P + + + + +G+ FH + + A L Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLVSHGVSFHVGSQMTKLDAWDAAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230 + + F ++ +++GGG L++ + Sbjct: 192 SDARRVFDKLAQQGIHLKMVNMGGGFPTRYLKDIPTAQAYGQAIHGSLRKHFGNNIPETI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG +V N + V+ +S + + + + + Y T Sbjct: 252 IEPGRGMVGNAGAIKAEVVLVSRKSDEDDVRWVFLDIGKFGGLAETMDEAIRYS-IVTPR 310 Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 ++ G +C + D+ E + + IGD + E Y FNG Sbjct: 311 DGDEMEPCVLAGPTCDSADVLYEKTPYPMPVSLTIGDEVLIEGTGAYTTTYSAVAFNGF 369 >gi|126665613|ref|ZP_01736595.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Marinobacter sp. ELB17] gi|126630241|gb|EBA00857.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Marinobacter sp. ELB17] Length = 391 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 111/361 (30%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + ++ + + ++ A+K A + L +S+YE Sbjct: 29 QTPFVVIDTATIDSHYNELVEGFPY--AQVYYAVKANPAPQVLTLLRDKGANFDIASVYE 86 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E ++ ++ + L + A + Sbjct: 87 LEQVMALGVTAERISFGNTIKKAKDVRTFYEKGVRMFATDSEADLRNIAEVAPGSKIYVR 146 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + I + + G+ FH + + + A Sbjct: 147 ILTE---GTLTADWPLSRKFGCQQDMAMDLLILARDLGLVPYGVSFHVGSQQREIGAWDA 203 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSV 227 L ++ F +++ I++GGG + + L+E Sbjct: 204 ALGTVKVIFERLKEEDGIELKMINMGGGFPANYITRANEVKVYAEEIGRFLREDFGDELP 263 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I +EPG ++++N L + V+ IS + + + + Sbjct: 264 EIIIEPGRSLISNAGVLVSEVVLISRKSSTALHRWVYTDVGKFSGLIETLDEAIKFPIWT 323 Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI E H + IGDR+ + Y FNG Sbjct: 324 EKDGEGEDCVIAGPTCDSADIMYEDHKYPLPLSLAIGDRMYWFSTGAYTTTYSAVGFNGF 383 Query: 338 N 338 Sbjct: 384 P 384 >gi|317038522|ref|XP_001401610.2| ornithine decarboxylase [Aspergillus niger CBS 513.88] Length = 454 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 114/366 (31%), Gaps = 39/366 (10%) Query: 5 PYYLID-------KQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 P+Y+ D L N L+ + + A+KC + + + +G Sbjct: 74 PFYVADMGGGLPPASALENELEPCSAFLRESI-----AVKCNPDPEILRLMAKLGNGFDC 128 Query: 58 SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 +S E+ + E Y K + + +K KA Sbjct: 129 ASKAEIDMALETGVDPSRIIYAQPCKTKSYLRYAAQVGVKQMTFDNADELYKIKANYPDA 188 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 ++ LRI S S + + + + V G+ FH + F Sbjct: 189 ELYLRILTDDSNSLCQFSMKFGASLDVARQLLELAHQLELKVVGVSFHVGSGAEDPKAFL 248 Query: 177 AMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 +++ F ++ + +GGG + + L+ + +++ EP Sbjct: 249 KAVQDARLVFDQAAEIGHELHTLDVGGGFSQDTFEKFAGVLSEALETYFPPN-IRVIAEP 307 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP------ 287 G V N TL ++ E + + ++ D + S I+ + P Sbjct: 308 GRYYVANAFTLAANIIARREVRDPEDPANDAYMLYLNDGVYGNFSNIIFDHQHPVAQVLT 367 Query: 288 ---------------YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 T + G +C D+ + +++GD + FE++ Y Sbjct: 368 CASAANSPYAATSGGVTYSIWGPTCDGIDVISKRIALPALLEVGDWLYFEEMGAYTKCSA 427 Query: 332 NWFNGI 337 FNG Sbjct: 428 TRFNGF 433 >gi|89094856|ref|ZP_01167789.1| Ornithine decarboxylase [Oceanospirillum sp. MED92] gi|89080911|gb|EAR60150.1| Ornithine decarboxylase [Oceanospirillum sp. MED92] Length = 385 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 111/359 (30%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+ +D + + A + A+K A + + L +S E Sbjct: 23 PTPFLAMDLSVVEKRYVELEHGFPEAD--IFYAVKANPADEVIELLASKGSSFDIASPQE 80 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E +Y K ++ + L A + I Sbjct: 81 LDKVLAYGVPAERMSYGNTIKKASAIKYFYEQGVRLFATDSEADLQNIAKYAPGSNIYIR 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S + L+ + + + N G+ FH + + + + Sbjct: 141 VLTDGSEGA-DWPLSRKFGCNPEMAYELAVLAKELGLNPYGVSFHVGSQQRDIDVWDGAI 199 Query: 180 KN----IEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQI 229 E+ ++E I++GGG K + + +K F + +I Sbjct: 200 AKVKVIFERLLEEAGIRLEMINMGGGFPAIYLQKTNEFTTYAEEIKRFLREDFGEDIPRI 259 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG ++V + + + V+ IS + + + + Sbjct: 260 ILEPGRSLVGDAGVIVSEVVLISRKSSTALERWVYTDVGMFNGLIETLGEAIKYPISSSR 319 Query: 285 TG-PYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI ++ ++IGD + + Y + + FNG Sbjct: 320 QGEEEEVILAGPTCDSLDIMYEQFKYKLPLSLEIGDHVFWYSTGAYTTSYSSIEFNGFP 378 >gi|75303413|sp|Q8S3N2|DCOR_CAPAN RecName: Full=Ornithine decarboxylase; Short=ODC; AltName: Full=CaODC1; AltName: Full=CapODC gi|19387300|gb|AAL87201.1|AF480882_1 ornithine decarboxylase [Capsicum annuum] Length = 435 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 111/362 (30%), Gaps = 26/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ +D V+ A+KC L +S E+ Sbjct: 68 PFYVLDLGEVVSLMDQWNVAL--PNVRPFYAVKCNPEPSFLSMLAAMGSNFVCASRAEIE 125 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + K A + +++ ++ K K K + ++ Sbjct: 126 YVLSLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPKCELLLRIK 185 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177 + + E ++ V+G+ FH N +A Sbjct: 186 PMNDGNARCPMGPKY-GALPEEIEPLLRIAQASRLTVSGVSFHIGSGDADSNAYLGAIAA 244 Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + E ++++ + +GGG + FS + + I EPG Sbjct: 245 AKQVFETAAKFGMSKMNVLDIGGGFTSGHQFTTAATAVKSALQQHFSNEPELTIIAEPGR 304 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPN------ 284 TL TT++ S+ + D+ + + Sbjct: 305 FFAETAFTLATTIIGKRVRGDLREYWINDGLYGSMNCVLYDHATVTATPLACMSNRVNLN 364 Query: 285 ---TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + + + G +C A D + +++ D + F ++ Y + FNG N Sbjct: 365 CSGSKMFPSTIFGPTCDALDTVLRDYHVPELQVNDWVIFPNMGAYTKAAGSNFNGFNTSA 424 Query: 342 IA 343 I Sbjct: 425 IV 426 >gi|291301207|ref|YP_003512485.1| Orn/DAP/Arg decarboxylase 2 [Stackebrandtia nassauensis DSM 44728] gi|290570427|gb|ADD43392.1| Orn/DAP/Arg decarboxylase 2 [Stackebrandtia nassauensis DSM 44728] Length = 388 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 54/369 (14%), Positives = 95/369 (25%), Gaps = 30/369 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D L + +L A+K + + QY DG +S E+ Sbjct: 22 AYVYDLAALSERIAAVKAALP-PQTRLFYAMKANSRPELVARAAQYCDGIEIASPGELAT 80 Query: 66 GHEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + D + A T+ + +L + A++ + + Sbjct: 81 AIAAGARHLIYGGPSKTDAALTAALSCGTPVTVNVEGLHELRRLDRLARQHGTVAEIALR 140 Query: 124 PSVSYSKFIL-ADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLCF 175 + + + G ++ + GL H N Sbjct: 141 VNRATETPGGTHRMTGTPTPFGIDAAHLDDAVDLARRLPGVRLTGLHLHAVSNNLDAAAH 200 Query: 176 SAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231 + + + E ++LGGGI D + +V Sbjct: 201 ARFVAEALEYAADTATRHGLTWETVNLGGGIGVDPAGGSEFDLAD-FAARLTRPAVTTIF 259 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQE-----------S 278 E G + T T V DI V H +P Y Sbjct: 260 ELGRYLAAETGWYATEVTDIKTTHGRTFAVVRGGTHHFRLPAAWGYDHPAAVHPVDEWPY 319 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 P T V G C D+ +++GD + F Y + + F Sbjct: 320 PWQRPEARDTTVDVTGELCTPRDVLCRDLPVSRLRVGDVLVFGRTGAYGWDISHHDFLSH 379 Query: 338 NMPTIAVKN 346 P V + Sbjct: 380 PHPDTVVLD 388 >gi|149189477|ref|ZP_01867761.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] gi|148836634|gb|EDL53587.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] Length = 526 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 55/417 (13%), Positives = 124/417 (29%), Gaps = 56/417 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P +++ + L NNL N K ++ A+K + + N+ G Sbjct: 70 GSPLFVLSEDTLRNNLRRVKNAFGNYWPKPVNVMFAIKSNTNFAVRAICNEEGVGGDCFG 129 Query: 60 LYEVMLGH-EKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 EV + +T + I + I ++ ++ + A+++ Sbjct: 130 PGEVEATYIAGADPKTIALNGTVKPELAIRKAIEYGYAIHLDSYEEIEIVERIAREVKPA 189 Query: 118 IGLRI-------------NPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKN 157 +RI + F + + G ++ + ++ Sbjct: 190 EKVRIAVRLKVIPEDFFNDFEPDAYPFPNFIGAMKWIKFGLLKEEAKKIINRVKEIDMFE 249 Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV-- 211 G H +K + A+ + + Q + LGGG + Sbjct: 250 FYGFHTHLGRFSKRPEGWDALYREYARNIIEISRECGVQPFQVDLGGGWPREREPECRSK 309 Query: 212 ---------KDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI 255 +D+ + + + Q++LEPG I N TL T+V + ++ Sbjct: 310 EHMMNPNTIEDYAKVVCGGMLEEFTKEGFEVPQLWLEPGRYIAGNIGTLLTSVYVVKDDQ 369 Query: 256 KNLVIVDSSVEAHVPDY--------LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH 307 + + + + T + G C+ I+ Sbjct: 370 EMDYTYTMVDASTYLATLVESQESKNPVLPANKMTQPLVERTTEIAGPICIPS-IWESGA 428 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 ++ D ++ DV Y ++ + FN + P + R + +D + Sbjct: 429 RMPALQPKDVLAIMDVGHYAESQASQFNSLPRPATVLVKDGEAELIKRAETVDDVFA 485 >gi|33945616|emb|CAD91349.1| ornithine decarboxylase [Glycine max] Length = 434 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 48/365 (13%), Positives = 110/365 (30%), Gaps = 35/365 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+ ++D ++ +D + K V+ A+KC + L +S Sbjct: 57 IDTPFSVLDLGVVMGLMD--QWACKLPTVQPFYAVKCNPNLSLIGALAALGSSFDCASKA 114 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y K + ++++ ++ K + + Sbjct: 115 EIESVLSLGVSPDRIIYANPCKSESHIRYAASVGVNVTTYDSIDEVEKIRKCHPTCELLL 174 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK---NVNGLMFHNNCENKSFLCF 175 ++ + L E+ + +++ + V G+ FH + Sbjct: 175 RIKPPQDSGART----SLGLKYGALPEEVDELLQAAHEAGLKVTGVSFHIGSGGADTRAY 230 Query: 176 SAMLKNIEKEFGH----FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + + F + ++ + +GGG + + +K F ++ + + Sbjct: 231 HGAISAAKNVFESASRLGLPRMGVLDIGGGFTSGPSFEAAALKINAAIEGSFGKEEGLVV 290 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------------DSSVEAHVPDYLLY 275 EPG TL T V+ D + +P Sbjct: 291 IGEPGRYFAETAFTLATRVIGKRVRGDVREYWIDDGIYGTLNNIVFDYATVTCMPLACTS 350 Query: 276 QESATIYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + Y + V G +C + D + +++ D + F ++ Y + Sbjct: 351 KPENPTCCRDLNLKTYPSTVFGPTCDSIDTVLRDYQLPELQVNDWLVFPNMGAYTTSSGT 410 Query: 333 WFNGI 337 FNG Sbjct: 411 NFNGF 415 >gi|125808167|ref|XP_001360660.1| GA21280 [Drosophila pseudoobscura pseudoobscura] gi|54635832|gb|EAL25235.1| GA21280 [Drosophila pseudoobscura pseudoobscura] Length = 395 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 103/357 (28%), Gaps = 25/357 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + + + + A+KC + L + G +S EV L Sbjct: 34 LNICDLSSVERKYNLWVKYLPR--ITPYYAVKCNDDPMIVKVLAELGAGFDCASKNEVKL 91 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + ++ +K + +R Sbjct: 92 VLGLDVAPERIIFANPCRPVSHLEYAQQHRVANGTVDNEFEIYKLHKHYPQSNLIVRFKS 151 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + + ++ V G FH + +K + Sbjct: 152 EAKEAQCPLGDKFGCDADADATALMLLAKALDLKVTGTSFHVGSGCSELEAYDRAIKKAK 211 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236 F + ++ +GGG +D + + + +++ QI EPG Sbjct: 212 NIFKFGELLGYDMNFLDIGGGFPGSDDGK-FQKIAEIVNTSVQRHFPDDRVQIIAEPGRF 270 Query: 237 IVTNTTTLNTTVLDIS-----------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 V TL + V S + D+ + + + Sbjct: 271 FVAAAYTLVCKIHAKREVRNEAGKLDTIMYYLNDGVYGSFNCILYDHQVVTPEHYLDESE 330 Query: 286 G--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + +++ G SC A D E + GD I F ++ Y + + FNG +P Sbjct: 331 AFPEFKSLIWGPSCDALDKISEDLRLPNLNRGDLIGFPNMGAYTVPIASPFNGFEVP 387 >gi|114052146|ref|NP_001040457.1| ornithine decarboxylase [Bombyx mori] gi|95102974|gb|ABF51428.1| ornithine decarboxylase [Bombyx mori] Length = 444 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 67/369 (18%), Positives = 111/369 (30%), Gaps = 28/369 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D +++ + V+ A+KC + TL G +S E+ Sbjct: 34 PFYVMDLGEVVARYQQWKELLPR--VEPFYAVKCNDDKLLLTTLAALGTGFDCASKAEIE 91 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L E + A D + F++ +L K K I +R Sbjct: 92 LVTSLGVPPERIIFANPAKMASHIRYASAVGVDVMTFDSEIELMKIKQYMPHAQLLIRIR 151 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + + P + K +V G+ FH F ++ Sbjct: 152 CDAASAQCPLGIKFGCDPVTEAPRLLK-LASVLGLDVAGVSFHVGSGAAEAAVFGRGVQL 210 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----RLKEFSEKYSVQIYLEP 233 F + + LGGG + L+ + SV++ EP Sbjct: 211 ARSLFSAARDLGLRPRLLDLGGGYPGIAAQHHFMLEIAEVVNAALESHFPERSVRVVAEP 270 Query: 234 GEAIVTNTTTLNTTVL-------------DISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 G TL V D V S + D+ + Sbjct: 271 GRYFAAAAYTLAAMVHSKREIPAKEGEDADTHTMYFINDGVYGSFNCVLYDHQIVSAEPL 330 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 V G SC A D E P+ GD + F D+ Y I + FNG +P Sbjct: 331 HDRADSVLPCSVWGPSCDALDCVMESALLPPLDAGDWLVFRDMGAYTIPIASPFNGFPVP 390 Query: 341 TI-AVKNVD 348 + AV + Sbjct: 391 RVRAVVDAG 399 >gi|149190404|ref|ZP_01868676.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] gi|148835783|gb|EDL52748.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] Length = 508 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 53/417 (12%), Positives = 119/417 (28%), Gaps = 56/417 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P +++ + L NL N K ++ A+K + + N+ G Sbjct: 70 GSPLFVLSEDTLRGNLRRVKNAFGNYWPKPVNVMFAIKSNTNFAVRAICNEEGVGGDCFG 129 Query: 60 LYEVMLGH-EKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 EV H +T + I + I ++ ++ + A+++ Sbjct: 130 PGEVEATHIAGADPKTIALNGTVKPELAIRKAIEYGYAIHLDSYEEIEIVERIAREVKPA 189 Query: 118 IGLRI-------------NPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KN 157 +RI + F + + G ++ + Sbjct: 190 EKVRIAVRLKVIPEDFFNDFEPDAYPFPNFIGAMKWIKFGLLKEEAKKIINRVKEIDIFE 249 Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYP--- 210 G H +K + A+ + + Q + LGGG + Sbjct: 250 FYGFHTHLGRFSKQPEGWDALYREYARNVIEISRECGVQPFQVDLGGGWPREREPECRSK 309 Query: 211 -VKDFCQRLKEFSEKYSVQI--------------YLEPGEAIVTNTTTLNTTVLDISENI 255 ++++++ + +LEPG I N TL T+V + ++ Sbjct: 310 EHMMNSNTIEDYAKIVCEGMLEEFTKEGFEVPQLWLEPGRYIAGNIGTLLTSVYVVKDDQ 369 Query: 256 KNLVIVDSSVEAHVPDY--------LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH 307 + + + + T + G C+ I+ Sbjct: 370 EMDYTYTMVDASTYLATLVESQESKNPVLPANKMTQPLVKKTTEIAGPICIPS-IWESAA 428 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 ++ D ++ DV Y ++ + FN + P + R + D + Sbjct: 429 TMPALEPKDVLAIMDVGHYAESQASQFNSLPRPATVLVKDGQAELIKRAETVEDVFA 485 >gi|46123051|ref|XP_386079.1| hypothetical protein FG05903.1 [Gibberella zeae PH-1] Length = 448 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 109/365 (29%), Gaps = 37/365 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + + V+ A+KC + L++ G +S E+ Sbjct: 67 FFVADLGEVYR--QHLRWKKNLPRVRPFYAVKCNPDPQIIKLLSELGTGFDCASKTEIEQ 124 Query: 66 GH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K + + + +K ++ LRI Sbjct: 125 VLSAGLSPDRIIYAQPCKTNSYVRYVKSVGVKQMTFDNADELYKIAKLYPGAELFLRIMT 184 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S + E + NV G+ FH L F +++ Sbjct: 185 DDSESLCRFSMKFGAAMDTTEGLLALAKDLGLNVVGVSFHVGSGASDPLAFFKAVRDAHT 244 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F F + + +GGG T + + F V+I EPG V Sbjct: 245 VFQQARDFGFAMRTLDVGGGFCGDTFEAMANVLRGALDEFFPPHSGVEIIAEPGRYYVAT 304 Query: 241 TTTLNTTVLDIS-----------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-- 287 T+ ++ + V + + D+ Q +A I +G Sbjct: 305 AFTIACNIIARRTVEDPTLDGKGYMLYVNDGVYGNFSNIMFDHQ--QPTAKILRTSGKTL 362 Query: 288 --------------YTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINRKN 332 + + G +C D + F+ + +GD + FED+ Y Sbjct: 363 FETAAAEPTPVGEGFEYSIWGPTCDGIDRITDSTRFDPILDVGDWLYFEDMGAYTKCSAT 422 Query: 333 WFNGI 337 FNG Sbjct: 423 QFNGF 427 >gi|167031923|ref|YP_001667154.1| ornithine decarboxylase [Pseudomonas putida GB-1] gi|166858411|gb|ABY96818.1| Ornithine decarboxylase [Pseudomonas putida GB-1] Length = 387 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 120/359 (33%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ LID Q + D + K+ A+K A + D L + +S+YE Sbjct: 25 ETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + + +Y K + ++ T S+ + ++ A+ Sbjct: 83 LDKVMDRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + + I + + G+ FH + + + A + Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F +++ I++GGG ++ + LKE +I Sbjct: 202 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDELPEI 261 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG +++ N L + V+ ++ + + + + Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIETMDEAIKFPIWTEK 321 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 322 KGEAEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380 >gi|320160946|ref|YP_004174170.1| diaminopimelate decarboxylase [Anaerolinea thermophila UNI-1] gi|319994799|dbj|BAJ63570.1| diaminopimelate decarboxylase [Anaerolinea thermophila UNI-1] Length = 431 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 57/390 (14%), Positives = 125/390 (32%), Gaps = 34/390 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKN--AGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + +N+DT K G ++ A K + + + + G + S Sbjct: 36 TPLYIYDAHTIFHNIDTLKDTLKKYYPGESIITYAAKAYFSLRFAQFIAKTEVGIDAVSE 95 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E++ E + K +N I+ + + + + K Sbjct: 96 NELIFALRAGIKPERIHLHGNNKTYAELDHAVQANIHAIVIDNFEDIEILERLSHKKSPI 155 Query: 117 KIGLRINPSVSYS-KFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + +R+NP + + S+ G +D + + + G+ H Sbjct: 156 SVWIRVNPEIDEIATHPYRNTGHSVSKFGLTIRDGQAETAIRMLMANPNFRLIGIHTHIG 215 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 + + + + K + GGG + ++++ + + Sbjct: 216 SQIFDTAPYKQAIGEMLKLARRCNWIPAEVCPGGGWGVPYRHDEMINNNIENWIREISIV 275 Query: 222 SEK------YSVQIYLEPGEAIVTNTTTLNTTVLDISE--NIKNLVIVDSSVEAHVPDYL 273 ++ + ++ LEPG IV TV + + N + L+ VD + ++ L Sbjct: 276 IQEEYRGSNFLPRLILEPGRWIVARAGIAIYTVGRVKQFSNGEKLLAVDGGMGDNIRPPL 335 Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 E I + + GR C +GD V+ G+ + F Y+++ Sbjct: 336 YQAEYEAIVAENPLGSPTTCYRIVGRFCESGDELIHEIDLPEVQTGNHLIFPVSGAYHLS 395 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + +N P + + Sbjct: 396 MASNYNLFARPAVLWVENGSVNVLQERENL 425 >gi|332532720|ref|ZP_08408594.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis ANT/505] gi|332037747|gb|EGI74197.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis ANT/505] Length = 401 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 48/378 (12%), Positives = 113/378 (29%), Gaps = 27/378 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+++ D +L +L + VKL A+K + +L+ +S Sbjct: 19 LDTPFFVYDLDQLNTHLARLV---AQTDVKLWYAVKANPLSKIIQSLDSAGFNFDVASKG 75 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + K + + +++Q+ +AQ + ++ Sbjct: 76 ELEQVLAQGISSQRVLNTGPAKSPKQIKHFIERGVRIFVAESLNQVRWLNQQAQLQNTQL 135 Query: 119 GLRINPSVSYSKFILADPNRPF-SRLGEKCKD-----KIESEIKNVNGLMFH----NNCE 168 + + + + + + G C + + +GL Sbjct: 136 QVLLRVQLRWPEGEKNPLGGDSLTPFGLGCDEWQALNVADYPALKFDGLHIFQWGNMLST 195 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSE 223 K +S M+ + + ++ + LGGG+ K ++ Sbjct: 196 QKLSDLWSQMIAPLSQLASDLNISLKILDLGGGLGIPYTQNEATLDWDDLIAALAKIKND 255 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY 282 ++++E G V V++ +N ++ + + + Q+ Sbjct: 256 AGVEELWMELGRYAVGECGHYANPVVERKQNYNQEQVILSGGINHLLRPAVTSQDFPAAL 315 Query: 283 PNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 + G C A D GE + + D + F Y F Sbjct: 316 LRESSAKTQAVTLYGPLCTALDCLGEHNLPSDLNEHDWLVFSQCGAYGFTESMPYFLCHE 375 Query: 339 MPTIAVKNVDGTIKAIRE 356 + +GT+ +R+ Sbjct: 376 LAAEYTL-QNGTLTCVRQ 392 >gi|302308137|ref|NP_984947.2| AER087Cp [Ashbya gossypii ATCC 10895] gi|299789313|gb|AAS52771.2| AER087Cp [Ashbya gossypii ATCC 10895] Length = 450 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 52/368 (14%), Positives = 110/368 (29%), Gaps = 30/368 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ L + V+ A+KC + + L +S E+ Sbjct: 81 FFVCDLGEVERLLRYWRR--ELPRVQPYYAVKCNPDVRVLERLASLGVNFDCASKAEIER 138 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E Y K + + +K ++ LRI+ Sbjct: 139 VLQLGVAPERIIYANPCKVSSFIRFAAARGVRQSTFDNVEELYKIARFHPESQLLLRIST 198 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S ++ L+ + K+ N+ G+ FH F + + + + Sbjct: 199 DDSTAQCQLSAKYGCSPDEVDPLLAKVAELGLNLVGVSFHIGSGASDFSSLTQAVVDARR 258 Query: 185 EFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-YSVQIYLEPGEAIVT 239 F + + + +GGG F L V++ EPG +V Sbjct: 259 VFDRAAHFGLPALRVLDVGGGFQFDTFHQSSAILNAALDTHFPPGSGVELIAEPGRFLVA 318 Query: 240 NTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----- 284 TL++ V+ + N ++ + H A + Sbjct: 319 TAFTLSSHVIAKRELPERGSMLYINDGIYANMNCILFDHYQPTPRVLYHAAAFHYFDTTS 378 Query: 285 ------TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 P+ + G +C D + ++ + + +GD + F + Y + FNG Sbjct: 379 SKSRTAACPHRTSIWGPTCDGLDCITDEYYLRYDLAVGDWLYFANFGAYTSSAATPFNGF 438 Query: 338 NMPTIAVK 345 + Sbjct: 439 EAAVEVIY 446 >gi|330967131|gb|EGH67391.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 402 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 61/377 (16%), Positives = 123/377 (32%), Gaps = 32/377 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D L ++ + AGV+L A+K + M +TL + G SS E+ Sbjct: 25 AFIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83 Query: 66 GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQK--LHKKIGLR 121 + + ++ D ++ + L N + +++++ + + A++ + + +R Sbjct: 84 VMACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEQTGRVQPVFIR 143 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLC 174 INP + ++ + G D E+ + G H S Sbjct: 144 INPQLPAAQSSKLAMAGTATPFGIDEADLAEAVRLVDSATHLTLKGFHVHAMSHQMSVER 203 Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225 +L + + + + ++GGGI + + + C+ L++ + Sbjct: 204 HEQLLDFYLQRWQAWKALARHPEHLTHFNVGGGIGVDYLNSQQFDWQRLCRYLEKRLGEQ 263 Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 L EPG I VLD + +V + I+ Sbjct: 264 PDAPILRFEPGRFISAYCGYYVIEVLDSKSSHGEHFLVCRGGTHQFRLPVAQSHDHPVIH 323 Query: 283 PNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334 + P T V G+ C D+ K V IGD + Y N + F Sbjct: 324 LPSVPPTTASSEQAYTVVGQLCTPKDVLSRRQPFKDVNIGDLLVLPMAGAYGYNISHADF 383 Query: 335 NGINMPTIAVKNVDGTI 351 P+ + Sbjct: 384 LCHPRPSQHFVRNGERV 400 >gi|319761484|ref|YP_004125421.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Alicycliphilus denitrificans BC] gi|317116045|gb|ADU98533.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Alicycliphilus denitrificans BC] Length = 401 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 48/376 (12%), Positives = 101/376 (26%), Gaps = 34/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+Y D+ + + + GV L A+K + + +DG +S E Sbjct: 27 QTPFYAYDRSLIAARVAGVRQVLPQ-GVHLHYAIKANPMPALVGFMRPLVDGMDVASAGE 85 Query: 63 VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + L T + +D E+ ++ + + +L AQ L + + Sbjct: 86 LKLALDAGADPRTIGFAGPGKRDAELRQAVAAGVLLHAESARELEVLAASAQALGRSARV 145 Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKD------KIESEIKNVNGLMFHNNCENKS-- 171 + + + + G + + + G + +N Sbjct: 146 ALRINPDFELRGAGMHMGGGPKPFGIDAEQVPAMLRAMARDGLAFEGFHIYPGSQNLRGS 205 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225 ++ + + + +++LGGG + + L + Sbjct: 206 VIAESLHRSVELVLRLAHDAPAPVRYVNLGGGWGIPYVAGEQRLDLAPVADALAQVQAAL 265 Query: 226 SV-----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 Q+ LE G +V V+D + + +V Sbjct: 266 GRALPEAQMVLELGRYLVGEAGIYVARVIDRKVSRGQVFLVTDGGMHQHLAASGNFGQVI 325 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 +A V G C D+ E + GD + Y Sbjct: 326 RRNYPVVIGNRLQAAERESATVVGPLCTPLDVLAERMELAVAQPGDLVVVLQSGAYGATA 385 Query: 331 KNW-FNGINMPTIAVK 345 F G + Sbjct: 386 SPQAFLGHPPCAEVLV 401 >gi|302524721|ref|ZP_07277063.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. AA4] gi|302433616|gb|EFL05432.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. AA4] Length = 502 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 47/372 (12%), Positives = 115/372 (30%), Gaps = 30/372 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D + + + ++ A+K A + + Q G + E Sbjct: 18 PTPCLVVDLDVVRGSCARLRAVLPE--ARMYYAVKANPAPEVVRVVRQAGAGFDVAGREE 75 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L E+ +Y A F++ L K + A Sbjct: 76 IELCLAQGVRPESLSYGNPVKKARDIEFAHRVGVRRFTFDSREDLEKLAEFAPGATVSCR 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSA 177 + + + + + + + + G+ FH ++ + A Sbjct: 136 ILV----DSPGALTPFGRKFGCDPAMAAELLVRAAELGLDPEGIAFHVGSQHVDPRAWEA 191 Query: 178 MLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPV--KDFCQRLKEFSEKYS---VQI 229 + + + + +++GGG P +++ +++ ++ ++ Sbjct: 192 GIAAAGEVTRAVAQRGVSLRGLNIGGGFPVGYLTEPPSLEEYAAVIRDAVGRHFAVAPEL 251 Query: 230 YLEPGEAIVTNTTTLNTTVLDISE----NIKNLVIVDSSVEAHVPDYLL--YQESATIYP 283 EPG A+V + + + V+ +S + K V +D + + Sbjct: 252 SFEPGRAVVASAGVIRSEVVLVSRKSAADEKRWVYLDIGRYGGLAETENEAIAYRLVTAH 311 Query: 284 NTGPY-TAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 + GP +V G +C D+ + + ++ GD + Y + + FNG Sbjct: 312 DGGPDGPVVVAGPTCDGDDVLYQRTPYRLPLALRAGDYVDIPHAGAYTQSYSSVSFNGFP 371 Query: 339 MPTIAVKNVDGT 350 + Sbjct: 372 PLRAYFIGGESA 383 >gi|17548645|ref|NP_521985.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum GMI1000] gi|17430893|emb|CAD17575.1| probable staphyloferrin b siderophore synthesis decarboxylase protein [Ralstonia solanacearum GMI1000] Length = 413 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 56/377 (14%), Positives = 102/377 (27%), Gaps = 42/377 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 YL D L G +L A+K + + L+ + G +SL EV+ Sbjct: 19 AYLYDLDHLRERAARL-SAMLPPGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVVR 77 Query: 66 GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E + D A+ + I + QL + A ++ ++ + + Sbjct: 78 AREVGAQARIVFGGPGKTDDELQGALERGVELIHVESELQLRRLDAIACRMGRRARVLLR 137 Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 + + + + + V GL H Sbjct: 138 VNPNPLSADAVGKRAQGTLTMGGQPTQFGIEEDAVPDLIRLARTLPGVEVVGLHLHALSN 197 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKE 220 N L + ++ +++GGGI + + FC L Sbjct: 198 NLDADSHLALMRHYLSLALRLRREHGLTLDTLNVGGGIGVDYADPSHAFDWRRFCDGLGV 257 Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277 + +I E G I + T V+D+ N V H Sbjct: 258 LLAEAGAGCRIVFECGRFIAADCGYYVTEVVDLKRNHGRWFAVLRGGTHHFRLPASWQHN 317 Query: 278 SATIYPNTGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + +CG C D+ +++GDRI F+ Sbjct: 318 HPFAILPNARWDYPFERPSVLAQAVTLCGELCTPKDVLARDVVVDRLRVGDRIVFQLAGA 377 Query: 326 YNINRKNW-FNGINMPT 341 Y + + F P Sbjct: 378 YGWHISHHDFLSHPHPE 394 >gi|26987600|ref|NP_743025.1| ornithine decarboxylase [Pseudomonas putida KT2440] gi|24982277|gb|AAN66489.1|AE016277_8 ornithine decarboxylase, putative [Pseudomonas putida KT2440] Length = 371 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ LID Q + D + K+ A+K A + D L + +S+YE Sbjct: 9 ETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 66 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + +Y K + ++ T S+ + ++ A+ Sbjct: 67 LDKVMGRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 125 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + + I + + G+ FH + + + A + Sbjct: 126 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 185 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F +++ I++GGG ++ + LKE +I Sbjct: 186 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDELPEI 245 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG +++ N L + V+ ++ + + + + Sbjct: 246 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIETMDEAIKFPIWTEK 305 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 306 KGEAEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 364 >gi|170700579|ref|ZP_02891580.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia ambifaria IOP40-10] gi|170134527|gb|EDT02854.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia ambifaria IOP40-10] Length = 402 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 46/375 (12%), Positives = 96/375 (25%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TPY+ D+ + + GV L ++K + L+ +DG +S E+ Sbjct: 29 TPYFAYDRAAIDARVLALRDALP-PGVLLHYSIKANPMPAVVHHLSTRIDGFDVASATEL 87 Query: 64 MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + + E+ +++ + +++QL+ +L + + Sbjct: 88 ALALDAGMPADQIGFAGPGKGSDELRRAVASGVNVHVESLTQLHLVTALGWELGVQPNIA 147 Query: 122 INPSVSYSKFILADPNRPF-SRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171 I + + + G + +E+ + G + Sbjct: 148 IRINPDFHVDRSGMRMGGGAAAFGVDLEQVPALLRELEARDATLAGFHVFWGSQCLHAPT 207 Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI- 229 + K +++LGGG + + + Q Sbjct: 208 VIQAQRQSADLVMKLAADRSVAPRFVNLGGGFGIPYFPGETPLDVGAVTDAMRSWLPQFT 267 Query: 230 --------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 LE G +V V+D + + +V H Sbjct: 268 ENLPGTRLILELGRYLVGEAGIYVCRVIDRKVSRGKMFLVTDGGLHHHLAASGNFGQVLR 327 Query: 282 YPNT----------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + G C D E IGD + Y + Sbjct: 328 RNFPVLLGNRLGEAPRERCQIVGCLCTPLDRIAEDVPLPDAHIGDLVVVLQSGAYGRSAS 387 Query: 332 -NWFNGINMPTIAVK 345 + F G + Sbjct: 388 PSRFLGHPDAIEMLV 402 >gi|300696992|ref|YP_003747653.1| diaminopimelate decarboxylase protein (lysA) [Ralstonia solanacearum CFBP2957] gi|299073716|emb|CBJ53236.1| putative diaminopimelate decarboxylase protein (lysA) [Ralstonia solanacearum CFBP2957] Length = 413 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 105/392 (26%), Gaps = 45/392 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 YL D L G +L A+K + + L+ + G +SL EV+ Sbjct: 19 AYLYDLDHLRERAGRL-SAMLPPGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVVR 77 Query: 66 GHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E + K A+ + I + QL + A ++ + + + Sbjct: 78 AREVSAHARIVFGGPGKTDAELQGALERGIELIHVESELQLRRLDAVACRMGRCARVLLR 137 Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 + + + + + V GL H Sbjct: 138 VNPNPLSADSAGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLARGLAGVEVVGLHLHALSN 197 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 N L + ++ +++GGGI +R + Sbjct: 198 NLDADSHLALMRHYLALALRLRREHGLTLDTLNVGGGIGVDYAQPSHAFDWRRFCDGLGA 257 Query: 225 Y------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277 +I E G I + T V+DI N V H Sbjct: 258 LLAEAGAGCRIVFECGRFITADCGYYVTEVVDIKRNHGKWFAVLRGGTHHFRLPASWQHN 317 Query: 278 SATIYPNTGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 +T +CG C D+ + +GDRI F+ Sbjct: 318 HPFAIVPNAQWTYPFARPSVQAQAVTLCGELCTPKDVLARDVVVDRLSVGDRIVFQLAGA 377 Query: 326 YNINRKNW-FNGINMPTIAVKNVDGTIKAIRE 356 Y + + F P GT+ A+RE Sbjct: 378 YGWHISHHDFLSHPHPERRFV---GTLNAVRE 406 >gi|224368132|ref|YP_002602295.1| decarboxylase family protein [Desulfobacterium autotrophicum HRM2] gi|223690848|gb|ACN14131.1| decarboxylase family protein [Desulfobacterium autotrophicum HRM2] Length = 387 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 119/366 (32%), Gaps = 26/366 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+ +ID + L+ + + + A+K A + + +S+YE Sbjct: 25 DTPFLVIDTATVERRLEQLINVFPY--ASIYYAVKANPAIEILTMMRDKNVNFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ K + ++ T S+ + ++ A+ Sbjct: 83 LDRVLSLGISPDRISFGNTIKKSKDVRYFYEKGVRMYATDSEAD-IRNIARAAPGSRIYV 141 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + +L I ++ + G+ FH + + + A + Sbjct: 142 RILTEGTLTADWPLSRKFGCQLDMAMDLIILAKDLGLIPYGISFHVGSQQREIGAWDAAI 201 Query: 180 KNIEKEFG----HFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQI 229 ++ F ++ I+LGGG K ++ + Q + F + QI Sbjct: 202 GKVKGIFDRLEQEDDINLQMINLGGGFPANYLSKANDLETYGQEITRFLTESFGDDLPQI 261 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG +++ + + T V+ I+ + + + + + Sbjct: 262 ILEPGRSLIADAGVMVTEVVLIARKSRTALHRWVYLDVGKFSGLIETMDESIKYPIFTGK 321 Query: 285 TGP-YTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINM 339 G ++ G +C + DI ++ + I DR+ + Y + FNG Sbjct: 322 KGEVEEVVLAGPTCDSADILYENYKYKLPLNLAISDRVYWLSTGAYTSSYSAVEFNGFPP 381 Query: 340 PTIAVK 345 + Sbjct: 382 LAVYFI 387 >gi|154275626|ref|XP_001538664.1| ornithine decarboxylase [Ajellomyces capsulatus NAm1] gi|150415104|gb|EDN10466.1| ornithine decarboxylase [Ajellomyces capsulatus NAm1] Length = 446 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 102/360 (28%), Gaps = 32/360 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D ++ VK A+KC + + +G +S E+ Sbjct: 69 PFYIADLGQVYRQHVRWKKNLGR--VKPFYAVKCNPDPQVLRLMANLGNGFDCASKAEID 126 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 Y K S + +K K ++ LRI Sbjct: 127 CALGAGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPEAELYLRIL 186 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L+ + + + NV G+ FH + F +++ Sbjct: 187 TDDSASLCRLSMKFGASLSITRSLLELAKELKLNVIGVSFHVGSGAEDPRSFVKAVEDSR 246 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F ++ + +GGG + L E + +++ EPG V + Sbjct: 247 YVFDQAAEVGFDLKVLDVGGGFSEDTFERFASTLGDALDEHFPPH-IRVIAEPGRYYVAS 305 Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278 TL V+ I N + + H Sbjct: 306 AFTLAANVIARRDVSLEMSDSDSTSSATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 + P + G +C D+ + + IG+ + FE++ Y FNG Sbjct: 366 ESPVC--TPIEYSIWGPTCDGIDLITQRITLPGALDIGNWLYFENMGAYTKCSATCFNGF 423 >gi|89069157|ref|ZP_01156530.1| decarboxylase, pyridoxal-dependent [Oceanicola granulosus HTCC2516] gi|89045330|gb|EAR51396.1| decarboxylase, pyridoxal-dependent [Oceanicola granulosus HTCC2516] Length = 396 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 99/364 (27%), Gaps = 28/364 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D ++ + A+K A + L ++S E+ Sbjct: 38 PTLVVDLDRVEQQYRALSAGLGR--ATIHYAVKANPAEEVIARLVALGSHFDAASRGEIA 95 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121 L ++ K A + ++ +L K + A I L Sbjct: 96 LCLAQGARPRDISFGNTIKKPSDIAWAWDRGITLFAADSEEELEKIAEHAPGARVYIRLI 155 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + S + + L + + D G FH + + + L Sbjct: 156 V--ETSEADWPLTRKFGCDASKALELLDYATDLSLEPVGFSFHVGSQTRRAEMWIPALDA 213 Query: 182 ---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR-------------LKEFSEKY 225 + ++ +++GGG + + + Sbjct: 214 LAATWRAAQAAGHELSVLNIGGGFPAFYGEEIEAPEAYARAVMGLVTERFGEVAHIMAEP 273 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 + E G + + D+ + + S + + + YQ T + Sbjct: 274 GRGMVAEAGTIVAETMLVSRKSDRDVHRWVYLDIGRFSGLAETEGEAIRYQL-ETGRDHE 332 Query: 286 GPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPT 341 ++ G SC + D+ E +K GDR+ + Y + FNG Sbjct: 333 AMGPCILAGPSCDSADVLYEKRPVMLPLGLKSGDRVLIRNTGAYTSTYSSVGFNGFPPLD 392 Query: 342 IAVK 345 + Sbjct: 393 VVCI 396 >gi|269129052|ref|YP_003302422.1| Orn/DAP/Arg decarboxylase 2 [Thermomonospora curvata DSM 43183] gi|268314010|gb|ACZ00385.1| Orn/DAP/Arg decarboxylase 2 [Thermomonospora curvata DSM 43183] Length = 373 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 108/355 (30%), Gaps = 21/355 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D L ++ G +L A K + T+ Y+DG +S E+ Sbjct: 14 PAFVYDLGALREHVAAIRKALTG-GPELFYAAKANPDAEILKTVAPYVDGIEVASGGELK 72 Query: 65 LGHEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 A+ D E+ + + + + +L++ + + + + + Sbjct: 73 HVRAVLPKARLAFGGPGKTDEELALAVREAERVHVESPHELSRLARIGRDVDVLLRVNLA 132 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIE-SEIKNVNGLMFHNNCENKS---FLCFSAML 179 ++ P E C + + + + G+ H ++ +L Sbjct: 133 GERKGVALAMSGPFGMDPEAIEACHEILAGAPWVRLRGIHAHLASGLEAEALVRQSEEIL 192 Query: 180 KNIEKEFGHFIT-QIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + Q +LGGG+ + + + +++ ++ + EPG Sbjct: 193 QWARPWLEKTGCTQNPEFNLGGGMAVDYTDPHRRFDWTTYGRQIAALAQPGEILRI-EPG 251 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPY----- 288 A+ T VLD+ + V H+ G Sbjct: 252 RAVTVYAGWYVTQVLDVKKAHGQWYAVLRGGTHHIRTPVTKNHNQPFTVLPRGEQGPAVN 311 Query: 289 --TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMP 340 + G+ C D+F + +GD ++F Y N + F P Sbjct: 312 GAEVTLVGQLCTPKDVFARQVPVDRIAVGDVVAFSMAGAYAWNISHHDFLMHPKP 366 >gi|330879043|gb|EGH13192.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 402 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 60/376 (15%), Positives = 121/376 (32%), Gaps = 32/376 (8%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 ++ D L ++ + AGV+L A+K + M +TL + G SS E+ Sbjct: 26 FIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIERV 84 Query: 67 HEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQK--LHKKIGLRI 122 + + ++ D ++ + L N + +++++ + + A++ + + +RI Sbjct: 85 MACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEQTGRVQPVFIRI 144 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLCF 175 NP + ++ + G D E+ + G H S Sbjct: 145 NPQLPAAQSSKLAMAGTATPFGIDEADLAEAVRLVDSATHLTLKGFHVHAMSHQMSVERH 204 Query: 176 SAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYS 226 +L + + + + ++GGGI + + + C+ L++ + Sbjct: 205 EQLLDFYLQRWQAWKALARYPEHLTHFNVGGGIGVDYLNTQQFDWQRLCRYLEKRLGEQP 264 Query: 227 VQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYP 283 L EPG I VLD + +V + I+ Sbjct: 265 DAPILRFEPGRFISAYCGYYVIEVLDRKTSHGEHFLVCRGGTHQFRLPVAQSHDHPVIHL 324 Query: 284 NTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335 + P T V G+ C D+ V IGD + Y N + F Sbjct: 325 PSVPPTAASSEQAYTVVGQLCTPKDVLSRRQPFSGVNIGDLLVLPMAGAYGYNISHADFL 384 Query: 336 GINMPTIAVKNVDGTI 351 P + Sbjct: 385 CHPRPPQHFVRNGERV 400 >gi|148546138|ref|YP_001266240.1| ornithine decarboxylase [Pseudomonas putida F1] gi|148510196|gb|ABQ77056.1| ornithine decarboxylase [Pseudomonas putida F1] gi|313497233|gb|ADR58599.1| Ornithine decarboxylase [Pseudomonas putida BIRD-1] Length = 387 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ LID Q + D + K+ A+K A + D L + +S+YE Sbjct: 25 ETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + +Y K + ++ T S+ + ++ A+ Sbjct: 83 LDKVMGRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + + I + + G+ FH + + + A + Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F +++ I++GGG ++ + LKE +I Sbjct: 202 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDELPEI 261 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG +++ N L + V+ ++ + + + + Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIETMDEAIKFPIWTEK 321 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 322 KGEAEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380 >gi|149195262|ref|ZP_01872351.1| Orn/DAP/Arg decarboxylase, family 2 [Caminibacter mediatlanticus TB-2] gi|149134604|gb|EDM23091.1| Orn/DAP/Arg decarboxylase, family 2 [Caminibacter mediatlanticus TB-2] Length = 443 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 58/394 (14%), Positives = 129/394 (32%), Gaps = 33/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ ++ + N + V+ + K + ++ S Sbjct: 44 GSPLFVFSERDIENKYLEFKEAFSSRYPDVEFWWSYKTNYLGAICKVFHKLGSKAEVVSE 103 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 +E G+ +N YK E V I + ++N ++ A KL I Sbjct: 104 FEYQKARHLGIDGKDIIFNGPYKSKEALEVAVKEGAKIHIDHWDEINDLEEIADKLGVNI 163 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 + I +++ + L F+ + D I+ + + + +F+ + Sbjct: 164 PVAIRCNMNTGVYPLWSRFG-FNIDNNEAYDAIKRIYEGKKLYLIGLHTHIGTFMLSADA 222 Query: 179 LKNIEKEF--------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS---- 226 + K+ F IE++ LGGG ++ V + + + Y+ Sbjct: 223 YRVAAKKLTELKNRVEEEFGFNIEYLDLGGGFASKNRLKGVYQPPEVIVPTPDDYAIAIT 282 Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL 274 ++YLE G A++ L T+V + + + + Sbjct: 283 DTIYATNKGNLPKLYLETGRALIDEAGYLLTSVFASKRLPDGKVSYILDAGVNLLYTSFW 342 Query: 275 YQESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 Y + + +++ G C+ D+ + + P+ GD ++ V YN+ + Sbjct: 343 YNFDIFLSKKYDDISELSILNGPLCMNIDVIADNIYLPPLNRGDVVTIAPVGAYNVTQWM 402 Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNN 365 F P + + + + IRE D Sbjct: 403 QFIRY-RPAVVLIDKNSNPHLIREKEDLEDIIKR 435 >gi|301119039|ref|XP_002907247.1| ornithine decarboxylase 1 [Phytophthora infestans T30-4] gi|262105759|gb|EEY63811.1| ornithine decarboxylase 1 [Phytophthora infestans T30-4] Length = 481 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 112/385 (29%), Gaps = 49/385 (12%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D + + V+ A+KC + + L + G +S E+ Sbjct: 93 FYVVDTAAVEDRFKLWNQYLPE--VRPYYAVKCNPDPALIEGLARLGAGFDCASQTEISS 150 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 Y K A + D + F++ +L K + L + Sbjct: 151 VLGNGVSASDIIYANPCKQGSQITYAHANGVDMMTFDSQEELTKIHSINPSAKLVLRLYV 210 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAML 179 + S S + F + D + + +V G+ FH + +S + Sbjct: 211 DDSNS-----ICRLGTKFGAMVHDVPDILNHAKALNLDVVGVSFHVGSGCFNVEAYSDAV 265 Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQR------LKEFSEKYSVQIY 230 K F + +GGG T+ + C F +V++ Sbjct: 266 ALARKVFDIGHSQGFNFSLLDIGGGFPGTENAPIRFEDCALELKKSLAVHFPRSSNVKVI 325 Query: 231 LEPGEAIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEA 267 EPG +T TL V+ + + +S Sbjct: 326 SEPGRFFAASTHTLAVNVIGRKVAPTFDIPGQPPVLASAAGPTPNYMYFVNDGLYASFNC 385 Query: 268 HVPDYLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 V D+ Q + T M + G +C D + + IG I F + Sbjct: 386 MVYDHPSIQPVIMSDTASPSATQMFKASLWGPTCDGMDCIMKEVEMPLMDIGQWILFPSM 445 Query: 324 AGYNINRKNWFNGINMPTIAVKNVD 348 Y + FNG P + + Sbjct: 446 GAYTCAAGSDFNGFQRPQKIYFDSN 470 >gi|310643688|ref|YP_003948446.1| orn/dap/arg decarboxylase 2 [Paenibacillus polymyxa SC2] gi|309248638|gb|ADO58205.1| Orn/DAP/Arg decarboxylase 2 [Paenibacillus polymyxa SC2] Length = 425 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 65/391 (16%), Positives = 126/391 (32%), Gaps = 39/391 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+Y D L ++ + L R + V++ ALK + L G +S E Sbjct: 16 PTPFYYYDGDALHAHVSSLL-ARLHPAVRVHYALKANGNVPLAGLLRSLGCGVEIASAGE 74 Query: 63 VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + E + E Y K +A+ I +V +L +D A + + Sbjct: 75 MFVAMEAGYAAEDVLYAGPGKTIAELREAITCGIGCIHVESVRELRLLEDIAAQTGVFVR 134 Query: 120 LRIN----PSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNVNGLMFHNNCENKSFL 173 + +S + + RPF + + + +V + Sbjct: 135 AAVRINPDNDLSGATIKMGGVPRPFGVDEGQLDHFFKVLEDCPHVYFQGIQVYTGTQMLK 194 Query: 174 ------CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 F+ L+ E+ + + I+LGGG + + L +E Sbjct: 195 ADQILASFANTLQLAERVQAQYSVAMHTINLGGGFGVPYFAHEQPLDMDHVIDGLNALAE 254 Query: 224 KYSVQI-----YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH---------- 268 + ++ +E G +V + L ++ +V H Sbjct: 255 QTRSRMPGVRLIIESGRYLVAQSGMYVCRALYTKKSKGEKFVVADGGMNHYVAATFRGRR 314 Query: 269 VPDYLLYQ--ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + D + + +T T + G C D + P++ GD I+F + Y Sbjct: 315 LRDNYPVRIMRRQSAEVSTELETVSIVGPLCTPEDCIVKKAELPPIQEGDYIAFPNAGAY 374 Query: 327 NINRKNW-FNGINMPTIAVKNVDGTIKAIRE 356 ++ F G P + + G + IRE Sbjct: 375 GLSYSPLYFLGHATPAE-LLDYRGKVHIIRE 404 >gi|329895688|ref|ZP_08271111.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC3088] gi|328922206|gb|EGG29560.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC3088] Length = 315 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 102/304 (33%), Gaps = 21/304 (6%) Query: 81 YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNR 138 ++ + A+ + +V++L + AQ+L + LR+NP V Sbjct: 8 KREEMVAALEAGIHCFNVESVAELELLAEVAQELGKEAPVSLRVNPDVDAKTHPYISTGL 67 Query: 139 PFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGH 188 ++ G + ++ V G+ H + F L ++ Sbjct: 68 AENKFGISMEHAYQAYAFVHATEGLRVIGIDCHIGSQLTELAPFKDALDRVLDLVDRLRE 127 Query: 189 FITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN 245 +E + GGG+ KD + D+ + LK + + LEPG +IV N TL Sbjct: 128 AGIVLEHVDAGGGLGVRYKDETPPDITDYVRALKGPLAARGLGLMLEPGRSIVANAGTLI 187 Query: 246 TTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAG 300 T V + K+ VD+++ + L + + + G C G Sbjct: 188 TQVDFLKTTEKHNFALVDAAMNDLLRPALYQAWMDIKPLEVNSDVTEKAWNIVGPVCETG 247 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 D G+ + GDR++ Y + +N + + D + Sbjct: 248 DFLGKDRRLA-LSAGDRLAVLGAGAYGFVMASNYNTRPRAAEIMIDGDQMHLVRERETVA 306 Query: 361 DYYN 364 D + Sbjct: 307 DLFK 310 >gi|320159270|ref|YP_004191648.1| ornithine decarboxylase/Arginine decarboxylase [Vibrio vulnificus MO6-24/O] gi|319934582|gb|ADV89445.1| ornithine decarboxylase / Arginine decarboxylase [Vibrio vulnificus MO6-24/O] Length = 399 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 104/357 (29%), Gaps = 17/357 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P L+D + V L ALK + TL ++ EV Sbjct: 36 PLLLLDCDVIRQQYRALKNAL--PNVTLHYALKPLPHPVVVRTLLAEGASFDLATTGEVE 93 Query: 65 L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L E E + K +F + K KA ++ +R++ Sbjct: 94 LVASEGVPAELTIHTHPIKRDADIRDALAYGCNVFVVDNLNELEKFKAYCDEVELLVRLS 153 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSAML 179 S + L+ + + + GL FH + NK Sbjct: 154 FRNSEAFADLSKKFGCSPEQALVIIETAKEWNIRIKGLSFHVGSQTTNPNKYVEAIHTCR 213 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQIYL--EPGE 235 +E+ + + + +GGG + P+ FC + E +++ EPG Sbjct: 214 HVMEQVVERGLPALSTLDIGGGFPVNYTQQVMPIDQFCVPINEALSLLPETVHVLAEPGR 273 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290 I T +V+ +E + S + D Y TI + Sbjct: 274 FICAPAVTSVASVMGQAEREGQIWYYLDDGIYGSFSGLMFDDARYPL-TTIKQGGELLPS 332 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 ++ G +C + D+ E + GD + + Y FN N Sbjct: 333 VLSGPTCDSVDVIAENILLPKLNNGDLVIGRTMGAYTSATATDFNFFKRAQTIALNE 389 >gi|160902007|ref|YP_001567588.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95] gi|160359651|gb|ABX31265.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95] Length = 390 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 117/366 (31%), Gaps = 26/366 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP+ ++D + N V++ A+K + + +TL +S Sbjct: 14 LETPFLVLDTNYVKENYYKLKNSIN--DVEIFYAVKANSHPSILETLRDLGASFDVASRG 71 Query: 62 EV-MLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ L + ++ + A + + + ++ K A Sbjct: 72 EIEKLMRLGISTDKMSFGNTIKKEKDIKFAWDNGVEYFAVDAEMEVEKIARNAPGAKVYG 131 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176 L ++ + S + ++ K + G+ FH ++ + + Sbjct: 132 RLSMSSNDSDWPLSGKFGTDVDHLIEI----LKYAKRKGLIPYGVSFHVGSQSYNKYKWK 187 Query: 177 AMLKNIEKEFG---HFITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSV---- 227 + N + F ++ ++LGGGI T V++ + + E ++Y Sbjct: 188 EAILNASEVFEKLHKQKIDLKMLNLGGGIPVKHTKPVPEVEEIGEVINESIKEYLGWVDG 247 Query: 228 -QIYLEPGEAIVTNTTTLNTTVL--DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 ++ EPG ++V N + + VL + + + ++ + Sbjct: 248 LRVLSEPGRSMVGNAGIIASRVLLRGRKGTQNWVFLDTGVFHGLMETIENFRYEVLVEGK 307 Query: 285 TGPY--TAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 T + G +C + D + + D + F + Y FNGI Sbjct: 308 EYSETTTMTLAGPTCDSVDTIYDEIELPIDIDYNDIVYFINTGAYTNEYATSFNGIEPLK 367 Query: 342 IAVKNV 347 + Sbjct: 368 VYTVED 373 >gi|120612446|ref|YP_972124.1| Orn/DAP/Arg decarboxylase 2 [Acidovorax citrulli AAC00-1] gi|120590910|gb|ABM34350.1| Orn/DAP/Arg decarboxylase 2 [Acidovorax citrulli AAC00-1] Length = 404 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 46/376 (12%), Positives = 106/376 (28%), Gaps = 36/376 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP++ D+ KL + +++ ++K + + +DG +S E+ Sbjct: 31 TPFFAYDRSKLAERVALLRRWLA-PDIRIHYSIKANPMPALVHCMAGLVDGFDVASAGEL 89 Query: 64 MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119 + + E A + ++ + + T+ +V QL+ A + ++ Sbjct: 90 RVALDTGMAAEHIALAGPGKTELDVRSTVGAGATLTLESVHQLDAAARAGQALGVRPRVA 149 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFL 173 LRINP + P + G + I + G + Sbjct: 150 LRINPDFQPKTSGMRMGGGP-RQFGIDAEQAPGVLAAIAQRDLDFRGFHVFWGSQCLDAD 208 Query: 174 C----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKY 225 + + + + + ++++GGG + ++ ++++ Sbjct: 209 TVISAQRHVAELVVRLADQANAPVAFVNMGGGFGIPYFENERALDLEPIGAAMRQWLVPL 268 Query: 226 SV-----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 ++ +E G +V +LD + +V H Sbjct: 269 RQRLPEARLAMEFGRYLVGEAGIYVCRILDKKVSRGETFLVTDGGLHHQLAASGNFGQVL 328 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 T + G C D + IGD + Y + Sbjct: 329 RRNYPVAIGNKSGLPATETCHIVGCLCTPLDRIADRVALASPDIGDFVVVAQSGAYGRSA 388 Query: 331 KN-WFNGINMPTIAVK 345 F P + Sbjct: 389 SPAAFLSHPEPAEILV 404 >gi|213966727|ref|ZP_03394878.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Pseudomonas syringae pv. tomato T1] gi|301383239|ref|ZP_07231657.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. tomato Max13] gi|302061449|ref|ZP_07252990.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. tomato K40] gi|302133486|ref|ZP_07259476.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928577|gb|EEB62121.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Pseudomonas syringae pv. tomato T1] gi|331018464|gb|EGH98520.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 387 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 113/361 (31%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D K+ A+K A + + L +S+YE Sbjct: 25 ETPFVVIDTAIISKAYDDLRAGFDF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + G E +Y K + ++ + L A + Sbjct: 83 LDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I + + G+ FH + + + A Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227 + ++ F ++ I++GGG ++ + LKE Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG ++++N L + V+ ++ + + + + Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|83747080|ref|ZP_00944124.1| Ssd [Ralstonia solanacearum UW551] gi|207739670|ref|YP_002258063.1| staphyloferrin b siderophore synthesis decarboxylase protein [Ralstonia solanacearum IPO1609] gi|83726210|gb|EAP73344.1| Ssd [Ralstonia solanacearum UW551] gi|206593052|emb|CAQ59958.1| staphyloferrin b siderophore synthesis decarboxylase protein [Ralstonia solanacearum IPO1609] Length = 413 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 56/377 (14%), Positives = 100/377 (26%), Gaps = 42/377 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 YL D L G +L A+K + + L+ + G +SL EV+ Sbjct: 19 AYLYDLDHLRERAGRL-SAMLPPGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVVR 77 Query: 66 GHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E + K A+ + I + QL + A ++ ++ + + Sbjct: 78 AREVGAHARIVFGGPGKTDAELQGALERGVELIHVESELQLRRLDAVACRMGRRARVLLR 137 Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 + + + + + V GL H Sbjct: 138 VNPNPLSADSAGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLARGLPGVEVVGLHLHALSN 197 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220 N L + ++ +++GGGI + + FC L Sbjct: 198 NLDADSHLALIRHYLALALRLRREHGLTLDTLNVGGGIGVDYAQPSQAFDWRRFCDGLGA 257 Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277 + +I E G I + T V+DI V H Sbjct: 258 LLAEAGAGCRIVFECGRFIAADCGYYVTEVVDIKRTHGKWFAVLRGGTHHFRLPASWQHN 317 Query: 278 SATIYPNTGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + +CG C D+ + +GDRI F+ Sbjct: 318 HPFAIVPNAQWAYPFARPSVQAQAVTLCGELCTPKDVLARDVVVDRLSVGDRIVFQLAGA 377 Query: 326 YNINRKNW-FNGINMPT 341 Y + + F P Sbjct: 378 YGWHISHHDFLSHPHPE 394 >gi|195150603|ref|XP_002016240.1| GL11482 [Drosophila persimilis] gi|194110087|gb|EDW32130.1| GL11482 [Drosophila persimilis] Length = 395 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 103/357 (28%), Gaps = 25/357 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + + + + A+KC + L + G +S EV L Sbjct: 34 LNICDLSSVERKYNLWVKYLPR--ITPYYAVKCNDDPMIVKVLAELGAGFDCASKNEVKL 91 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + ++ +K + +R Sbjct: 92 VLGLDVAPERIIFANPCRPVSHLEYAQQHRVANGTVDNEFEIYKLHKHYPQSNLIVRFKS 151 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + + ++ V G FH + +K + Sbjct: 152 EAKEAQCPLGDKFGCDADADATALMLLAKALDLKVTGTSFHVGSGCSELEAYDRAIKKAK 211 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236 F + ++ +GGG +D + + + +++ QI EPG Sbjct: 212 NIFKFGELLGYDMNFLDIGGGFPGSDDGK-FQKIAEIVNTSVQRHFPDDRVQIIAEPGRF 270 Query: 237 IVTNTTTLNTTVLDIS-----------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 V TL + V S + D+ + + + Sbjct: 271 FVAAAYTLVCKIHAKREVRNEAGKLDTIMYYLNDGVYGSFNCILYDHQVVTPEHYLDESA 330 Query: 286 G--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + +++ G SC A D E + GD I F ++ Y + + FNG +P Sbjct: 331 AFPEFKSLIWGPSCDALDKISEDLRLPNLNRGDLIGFPNMGAYTVPIASPFNGFEVP 387 >gi|315125301|ref|YP_004067304.1| diaminopimelate decarboxylase [Pseudoalteromonas sp. SM9913] gi|315013814|gb|ADT67152.1| diaminopimelate decarboxylase [Pseudoalteromonas sp. SM9913] Length = 401 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 53/378 (14%), Positives = 113/378 (29%), Gaps = 27/378 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+++ D L +L + VKL A+K + LN +S Sbjct: 19 LDTPFFVYDLDSLNTHLTRLV---AQTEVKLWYAVKANPLSSVIQRLNNAGFNFDVASKG 75 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ E K + T + +++Q+ ++A ++ Sbjct: 76 ELEQVLAQGINSERVLNTGPAKSPKQIKHFIARGVRTFVAESLNQVRWLNEQAIAQQCQL 135 Query: 119 GLRINPSVSYSKFILADPNRPF-SRLGEKCKDKI-----ESEIKNVNGLMFH----NNCE 168 + + + + + + G C + + N +GL Sbjct: 136 QVLLRVQLRWPEGDKNPLGGDSLTPFGLGCDEWQTLNTSDYCALNFDGLHIFQWGNMLSS 195 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-----KEFSE 223 +K ++ M+ + + ++ + LGGG+ L K + Sbjct: 196 DKLAELWTQMITPLRQLAEDLNINLKVLDLGGGLGIPYTLDTPSLSWDALIEALAKIKCD 255 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDY---LLYQESA 279 ++++E G V T V++ + VI+ + + + Sbjct: 256 AGVTELWMELGRYAVGECGHYATPVVERKLNYGQQQVIMSGGINHLLRPAVTSQDFPARL 315 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 N + G C A D GE + D + F Y F Sbjct: 316 LRDSNAANQAMSLYGPLCTALDCLGEHQLPSDLNEQDWLVFSQCGAYGFTESMPYFLCHE 375 Query: 339 MPTIAVKNVDGTIKAIRE 356 + V + +G + +R+ Sbjct: 376 LAGEYVID-NGVLSCVRQ 392 >gi|297472150|ref|XP_002685706.1| PREDICTED: ornithine decarboxylase 1-like [Bos taurus] gi|296490255|gb|DAA32368.1| ornithine decarboxylase 1-like [Bos taurus] Length = 683 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 100/357 (28%), Gaps = 30/357 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + + D L + V +KC ++ M L SS E+ Sbjct: 69 FMVADLDVLASRHQVFRQALPR--VSPFYVVKCNSSPWMLRVLAALGTSFDCSSQGELEQ 126 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y A K S ++FN+ + AQ + Sbjct: 127 VLDLGVAPSRIVYANACKPVSHIRFASLHGVKLLVFNS---EEELIKVAQHHPGARLVLW 183 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 S S F L+ + E + V G FH ++ F + + Sbjct: 184 WTQDSDSIFPLSSKFGARLEVCEHLLESARDLGLAVVGTSFHVGSRCQTPRNFMKAIVDC 243 Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKDYPVKD------FCQRLKEFSEKYSVQIYLEP 233 + F + + + GG + P + ++F E V++ EP Sbjct: 244 RRVFEMGSSIGHDMSLLDIRGGFSREEGSDPEFEEVAGVINAALAQDFPEGSGVEVIAEP 303 Query: 234 GEAIVTNTTTLNTTVLDI--------SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 G T T ++ + + + + Sbjct: 304 GRFYATFVCTTAVNIIAKKAVLEPRGRRKLLYYLNDGHYGTFRIFPRESEPRMPIMVKEL 363 Query: 286 GP----YTAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 P + + G +C A D +F + + +GD + F + Y + F+G+ Sbjct: 364 SPKLSLFPCTLFGPTCDAFDKLFLKEVQLPELDVGDWLVFPFMGAYTSVLSSTFSGL 420 >gi|194664373|ref|XP_610618.4| PREDICTED: ornithine decarboxylase 1-like [Bos taurus] Length = 441 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 100/357 (28%), Gaps = 30/357 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + + D L + V +KC ++ M L SS E+ Sbjct: 69 FMVADLDVLASRHQVFRQALPR--VSPFYVVKCNSSPWMLRVLAALGTSFDCSSQGELEQ 126 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y A K S ++FN+ + AQ + Sbjct: 127 VLDLGVAPSRIVYANACKPVSHIRFASLHGVKLLVFNS---EEELIKVAQHHPGARLVLW 183 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 S S F L+ + E + V G FH ++ F + + Sbjct: 184 WTQDSDSIFPLSSKFGARLEVCEHLLESARDLGLAVVGTSFHVGSRCQTPRNFMKAIVDC 243 Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKDYPVKD------FCQRLKEFSEKYSVQIYLEP 233 + F + + + GG + P + ++F E V++ EP Sbjct: 244 RRVFEMGSSIGHDMSLLDIRGGFSREEGSDPEFEEVAGVINAALAQDFPEGSGVEVIAEP 303 Query: 234 GEAIVTNTTTLNTTVLDI--------SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 G T T ++ + + + + Sbjct: 304 GRFYATFVCTTAVNIIAKKAVLEPRGRRKLLYYLNDGHYGTFRIFPRESEPRMPIMVKEL 363 Query: 286 GP----YTAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 P + + G +C A D +F + + +GD + F + Y + F+G+ Sbjct: 364 SPKLSLFPCTLFGPTCDAFDKLFLKEVQLPELDVGDWLVFPFMGAYTSVLSSTFSGL 420 >gi|307701187|ref|ZP_07638209.1| diaminopimelate decarboxylase [Mobiluncus mulieris FB024-16] gi|307613581|gb|EFN92828.1| diaminopimelate decarboxylase [Mobiluncus mulieris FB024-16] Length = 538 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 56/417 (13%), Positives = 114/417 (27%), Gaps = 75/417 (17%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP +++D ++ A K F G+ G ++S Sbjct: 66 TPVFIMDMDDFRKRARAWREAFTKTFGKGNAQVYYAGKAFLCLGLARVATAQGLGLDTAS 125 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ L + K AV + II ++++++ + + L + Sbjct: 126 PGELTLALASGIDPLRVGLHGNGKSAALLHQAVSAGIGRIIIDSLAEIPRLQRVLDALPQ 185 Query: 117 ----KIGLRINPSVSYSKFILADPNRPFSRLGEKCK------------------------ 148 + +R+ V + G + Sbjct: 186 AATVPVMIRLTTGVHAGGHEYIATAHEDQKFGLSLEPGTHAGLCPDDSDWDGCYVVSPAD 245 Query: 149 --------DKIESEIKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWI 196 + + + GL H + +F F +++ + I Sbjct: 246 SPALAAVKLILADDRLELVGLHSHIGSQISAFAGFTAAAQKIIEFRGAVARETGYLVPEI 305 Query: 197 SLGGGIHFTDKDYPVKDFC---------QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTL 244 LGGG + +++ E++ + +EPG ++V TT Sbjct: 306 DLGGGYGVAYTAATPPGMAPHEIAEKLYRAVQDACEQHDQPLPAVSVEPGRSLVAPTTIT 365 Query: 245 NTTVLDISEN-----------IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYT 289 VL+I + + V VD + ++ L A Sbjct: 366 LYRVLNIKDQPVGTRLDGSVVYRRYVAVDGGMSDNIRPALYDAHYTATLANRLSAAPLVA 425 Query: 290 AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 V G C +GDI + GD ++ Y + + +N P + Sbjct: 426 TRVVGTHCESGDIVVRNVALPADLTEGDLLAVPMTGAYGWSMSSNYNWFTRPGVLGV 482 >gi|328544617|ref|YP_004304726.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [polymorphum gilvum SL003B-26A1] gi|326414359|gb|ADZ71422.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Polymorphum gilvum SL003B-26A1] Length = 376 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 103/353 (29%), Gaps = 30/353 (8%) Query: 17 NLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETH 75 N + + A+K A + L + +S+ E+ + G E Sbjct: 29 NYEAFARAL--PDTSVYYAVKANPAPEILSLLAELGSSFDCASVGEIEMVLAAGAGAERI 86 Query: 76 AYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFIL 133 +Y + A ++ ++++K A + + + Sbjct: 87 SYGNTIKKERDIARAFELGVRLFAVDSDAEVDKIARAAPGSKVFCRILCDGVGAEWPLSK 146 Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FI 190 P ++ +G+ FH + + + L F Sbjct: 147 KFGCVPEMA--PDVLEQAHRSGLVAHGVSFHVGSQQANLGAWDNALATAAAVFRETARRG 204 Query: 191 TQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244 +++ +++GGG Q L + + +EPG +V + + Sbjct: 205 IELKMVNMGGGFPARYLKDVPGVPAYGQAIFQALSDHFGNRLPETIIEPGRGMVGDAGLI 264 Query: 245 NTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 V+ IS + + + + + + Y + ++ G + Sbjct: 265 EAEVVLISRKSADDAVRWVYLDIGKFHGLAETMDEAIRYPIRTARDGDETA-PCVLAGPT 323 Query: 297 CLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NMPTIAV 344 C + D+ E + + IGD++ E Y FNG + + + Sbjct: 324 CDSVDVLYEKTPYELPVSLSIGDKVLIEACGAYTTTYSTVGFNGFAPLASYVI 376 >gi|118793147|ref|XP_001238365.1| AGAP011807-PA [Anopheles gambiae str. PEST] gi|116117239|gb|EAU75863.1| AGAP011807-PA [Anopheles gambiae str. PEST] Length = 397 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 62/373 (16%), Positives = 116/373 (31%), Gaps = 33/373 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +++D ++ + + VK A+KC + TL G +S E+ Sbjct: 32 PLHVLDLDDVVR--KHYGWCAQMPRVKPYYAVKCNDDPRILQTLMTLGTGFDCASKGEME 89 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+ + K A + F+ +L K + L Sbjct: 90 RMLGYGVKPESIIFAQPAKSIPSLLYARSKQVSVMTFDGAVELEKIHQYYPEA----RLV 145 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIES---EIKNVNGLMFHNNCENKSFLCFSAM 178 + K + + + + + NV G+ FH + + Sbjct: 146 LRMRHDSLKVRCSLGKKFGCDPIAEAPELLRYAATLRMNVIGISFHVGSDCDEHEVYYEA 205 Query: 179 LKNIEKEFGH---FITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEKYSVQIYL 231 +K + F + + + +GGG + Y + F + ++I Sbjct: 206 VKIAKGLFEYAKTIGYEFSLLDIGGGFPGDNDKPIDRYVQAVNVAIDQFFPAESDIRIIA 265 Query: 232 EPGEAIVTNTTTLNTTVL-----------DISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 EPG V++ TL + V + + D L Q+ Sbjct: 266 EPGRYYVSSAVTLVSFVDSKRVMKEKQPDGTEKTRMYYYLNDGIFGTFYCTALEGQQVVP 325 Query: 281 IYPNT--GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 I + Y + G +C D E + +GD + FE+V Y + N FNG Sbjct: 326 IVRSKLTKRYDTTLWGPTCHVVDKIAEAR-LPELDVGDSVVFENVGAYGMVLANQFNGFP 384 Query: 339 MPTIAVKNVDGTI 351 +P + +GT Sbjct: 385 LPKVRAYLREGTW 397 >gi|330962453|gb|EGH62713.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 387 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 113/361 (31%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D K+ A+K A + + L +S+YE Sbjct: 25 ETPFVVIDTAIISKAYDDLRAGFDF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + G E +Y K + ++ + L A + Sbjct: 83 LDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGSKVYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I + + G+ FH + + + A Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227 + ++ F ++ I++GGG ++ + LKE Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG ++++N L + V+ ++ + + + + Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|325275905|ref|ZP_08141752.1| ornithine decarboxylase [Pseudomonas sp. TJI-51] gi|324098955|gb|EGB96954.1| ornithine decarboxylase [Pseudomonas sp. TJI-51] Length = 387 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ LID Q + D + K+ A+K A + D L + +S+YE Sbjct: 25 ETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + +Y K + ++ T S+ + ++ A+ Sbjct: 83 LDKVLGRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + + I + + G+ FH + + + A + Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F +++ I++GGG ++ + LKE +I Sbjct: 202 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDELPEI 261 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG +++ N L + V+ ++ + + + + Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIETMDEAIKFPIWTEK 321 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 322 KGETEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLATGAYTTSYSAVEFNGFP 380 >gi|213966939|ref|ZP_03395089.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. tomato T1] gi|301385124|ref|ZP_07233542.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. tomato Max13] gi|302059679|ref|ZP_07251220.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. tomato K40] gi|302131930|ref|ZP_07257920.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928261|gb|EEB61806.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. tomato T1] Length = 402 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 60/377 (15%), Positives = 120/377 (31%), Gaps = 32/377 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D L ++ + AGV+L A+K + M +TL + G SS E+ Sbjct: 25 AFIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83 Query: 66 GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQK--LHKKIGLR 121 + + ++ D ++ + L N + +++++ + + A++ + + +R Sbjct: 84 VMACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEQTGRVQPVFIR 143 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLC 174 INP + ++ + G D E+ + G H S Sbjct: 144 INPQLPAAQSSKLAMAGTATPFGIDEADLAEAVRLVDSATHLTLKGFHVHAMSHQMSVER 203 Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225 +L + + + + ++GGGI + + + L++ + Sbjct: 204 HEQLLDFYLQRWQAWKALARHPEHLTHFNVGGGIGVDYLNSQQFDWQRLFCYLEKRLGEQ 263 Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 L EPG I VLD + +V + I+ Sbjct: 264 PDSPILRFEPGRFISAYCGYYVIEVLDRKTSHGEHFLVCRGGTHQFRLPVAQSHDHPVIH 323 Query: 283 PNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334 + P T V G+ C D+ K V IGD + Y N + F Sbjct: 324 LPSVPPTAASPEQAYTVVGQLCTPKDVLSRRQPFKDVNIGDLLVLPMAGAYGYNISHADF 383 Query: 335 NGINMPTIAVKNVDGTI 351 P + Sbjct: 384 LCHPRPPQHFVRNGERV 400 >gi|330823348|ref|YP_004386651.1| pyridoxal-dependent decarboxylase [Alicycliphilus denitrificans K601] gi|329308720|gb|AEB83135.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Alicycliphilus denitrificans K601] Length = 401 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 51/376 (13%), Positives = 105/376 (27%), Gaps = 34/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+Y D+ + + + GV L A+K + + +DG +S E Sbjct: 27 QTPFYAYDRSLIAARVAGVRQVLPQ-GVLLHYAIKANPMPALVGFMRPLVDGMDVASAGE 85 Query: 63 VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + L +T + +D E+ ++ + + +L AQ L + + Sbjct: 86 LKLALDAGADPQTIGFAGPGKRDAELRQAVAAGVLLHVESARELEALAASAQALGRPARV 145 Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKD------KIESEIKNVNGLMFHNNCENKSFL 173 + + + + G + + + G + +N Sbjct: 146 ALRINPDFELRGAGMHMGGGPKPFGIDAEQVPAMLRAMARDGLAFEGFHIYPGSQNLRGN 205 Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD-------KDYPVKDFCQRLKEFS 222 + L + + +++LGGG + PV D +++ Sbjct: 206 VIAESLHRSVELVQRLAHDAPAPVRYVNLGGGWGIPYVAGERRLELPPVADALAQVQAAL 265 Query: 223 EK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 + Q+ LE G +V V+D + + +V Sbjct: 266 GRALPEAQMVLELGRYLVGEAGIYVARVIDRKVSRGQVFLVTDGGMHQHLAASGNFGQVI 325 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 +A V G C D+ E + GD + Y Sbjct: 326 RRNYPVVIGNRLQAAERESATVVGPLCTPLDVLAERMELAVAQPGDLVVVLQSGAYGATA 385 Query: 331 KNW-FNGINMPTIAVK 345 F G + Sbjct: 386 SPQAFLGHPPCAEVLV 401 >gi|322696105|gb|EFY87902.1| ornithine decarboxylase [Metarhizium acridum CQMa 102] Length = 427 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 107/365 (29%), Gaps = 37/365 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + + +K A+KC + L + G +S E+ Sbjct: 46 FFVADLGEVYR--QHLRWKKNLPRIKPFYAVKCNPDPKVLRLLAELGTGFDCASKGEIEQ 103 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E Y K + N + F+ +L K + + + Sbjct: 104 VLAMGTTPERIIYAQPCKTNSYVRFVKNAGVKQMTFDNADELYKIAKLYPEAELFLRIMT 163 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + S + + + G ++ NV G+ FH L F +++ Sbjct: 164 DDASSLCRLSMKFGAAMDTTEGLLA--VAKNLGLNVVGVSFHVGSGASDPLAFCKAVRDA 221 Query: 183 EKEF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 F F + + +GGG T + + F + I EPG V Sbjct: 222 HTVFQQAAEFGFAMRTLDVGGGFCGDTFEQMSGVLRDALDEFFPAGNGIDIIAEPGRYYV 281 Query: 239 TNTTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL---------- 273 + T+ ++ + N S + H Sbjct: 282 STAFTIACNIIARRTVEDPTLDGKGYMVYINDGVYGNFSSIMFDHQHPVAKILRSDGRTL 341 Query: 274 LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKN 332 SA V G +C D E FE + +GD + FED+ Y Sbjct: 342 YNTASANACNAGEGVEYSVWGPTCDGIDRISESIRFETILNVGDWLYFEDMGAYTKCSAT 401 Query: 333 WFNGI 337 FNG Sbjct: 402 QFNGF 406 >gi|170738789|ref|YP_001767444.1| ornithine decarboxylase [Methylobacterium sp. 4-46] gi|168193063|gb|ACA15010.1| Ornithine decarboxylase [Methylobacterium sp. 4-46] Length = 390 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 43/364 (11%), Positives = 104/364 (28%), Gaps = 33/364 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N ++ A+K A + L ++S+ E+ Sbjct: 23 PVMVLDLDVVRDNYHAFARAL--PDTRVFYAVKANPAPEVLGLLASLGSCFDTASVAEIQ 80 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--- 118 + + ++ + C A+ + +++ K A Sbjct: 81 MALAAGATADRISFGNTIKKERCIARALALGVRLFAVDCEAEVEKIARAAACADVAPEEV 140 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176 + + + + + + G+ FH + + + Sbjct: 141 QVFCRILCDGAGAEWPLSRKFGCVPDMAVDVLEHAHRQGLRAYGVSFHVGSQQGNTEAWD 200 Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSV 227 L + F + ++LGGG + L + Sbjct: 201 GALASAAMIFRECAERGIALAMVNLGGGFPTKYLKEVPGVESYGGAIFRALTKHFGNRMP 260 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278 + +EPG +V N + V+ +S+ + + + + + Y+ Sbjct: 261 ETIIEPGRGMVGNAGIIEAEVILVSKKSEAADEVRWVYLDIGKFGGLAETMDESIRYRIR 320 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334 + ++ G +C + D+ E + + IGD++ E Y F Sbjct: 321 TDHDEDRM-VPCVLAGPTCDSADVLYEKIPYPLPVSLSIGDKVLIEGAGAYTTTYAAVAF 379 Query: 335 NGIN 338 NG Sbjct: 380 NGFP 383 >gi|159030424|emb|CAO91325.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 569 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 66/375 (17%), Positives = 126/375 (33%), Gaps = 26/375 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++ +L NL + + ++ +K + + + L SS YE Sbjct: 28 GSPLYILNVGQLRRNLSHFVE-LVGSPSQVAYPVKANPSMAILNELVSLGCSADCSSKYE 86 Query: 63 VMLGHE-KFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V L F YN D + + +L T++ ++ + L+ + K L Sbjct: 87 VELALSCGFPLNRITYNSPAPDRQLMVDLLDGGATVVADSQAILDDLQHKLYGKDWSGSL 146 Query: 121 RINPS--------VSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCEN 169 + + + L P S+ G ++ ++ + GL H + Sbjct: 147 LVRVNPEKPVEYFHNTDWQDLVSHASPNSKFGIPSEELPDAPASCQLPIAGLHIHIGTQM 206 Query: 170 KSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + FS ++ I + ++LGGG+ D E +K+ Sbjct: 207 DNVSAFSHSIQFIHHLKNLIEACSHHCMRKLNLGGGLGIDFHDGQQFPTIPEYTEALKKH 266 Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++ +EPG A+V N L T + ++ + + + L S I Sbjct: 267 LLPGIEYIVEPGHALVGNAVALLTRIRELKQMRGRRWAIVDVGSDQLIKVTLLSWSHQII 326 Query: 283 PNTGPYTAM-----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G C AGDI + GD + + Y + N FNG Sbjct: 327 DRNHRTLPTQGDDAIGGPLCFAGDILLPSTNLEGQSPGDPLLIQHAGAYCYSVNNHFNGF 386 Query: 338 NMPTIAVKNVDGTIK 352 + P + G I+ Sbjct: 387 HGPGHITIDEMGQIE 401 >gi|313220937|emb|CBY31771.1| unnamed protein product [Oikopleura dioica] Length = 435 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 66/394 (16%), Positives = 124/394 (31%), Gaps = 37/394 (9%) Query: 3 KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++P L D + L + A+K G+ G ++S+ Sbjct: 31 ESPVLDLYDLEGLRGRFKEVQDALPSWNH--AFAIKTNPIRGVMLEAKNCGLGAEAASIG 88 Query: 62 EVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-- 117 E+ + F Y + + L+ I + + ++ K L+ Sbjct: 89 ELEHALQLGFDRSKIVYDSPVKTKAHLKHALNAGVVINLDNLEEIEKVNQLLPDLNVDVT 148 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCE 168 IG+R+NP+V K ++ S+ G E KI E + GL H + Sbjct: 149 GKIGMRVNPNVGAGKIAMSSTAGKSSKFGLPMTGEFEDEVVKIILENSWIQGLHQHIGSQ 208 Query: 169 NKSFLCFSAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 S + ++ + QI++I +GGGI + K + Sbjct: 209 GISLDQLTLGVERLVALARKINELAGTKQIKYIDVGGGIPTDYESDNEKVAYAEYAKLVN 268 Query: 224 KY-----SVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLL--- 274 + + E G ++VT + V + + V+ + + L Sbjct: 269 ERVPNLDEFNFHSEFGRSLVTKYAISVSKVETVKTWGDRITVLTHFGSNQFLREVYLPDT 328 Query: 275 YQESATIYPNTGPYTA------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + ++ G V G C GD + +K GD I D+ GY Sbjct: 329 WFHRMSVLDQNGDPKVSDLIEQDVGGPLCFQGDYLAKARALPEIKPGDYIVMHDIGGYTY 388 Query: 329 NRKNWFNGINMPTIAVKN-VDGTIKAIREFSYND 361 + FN I P + + + + S + Sbjct: 389 ALYSRFNSIQAPAVYGYDASENFYELKSRESLAE 422 >gi|159038615|ref|YP_001537868.1| Orn/DAP/Arg decarboxylase 2 [Salinispora arenicola CNS-205] gi|157917450|gb|ABV98877.1| Orn/DAP/Arg decarboxylase 2 [Salinispora arenicola CNS-205] Length = 418 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 103/391 (26%), Gaps = 38/391 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP Y+ D ++ N ++ +LK + DTL + S+ Sbjct: 22 VQTPAYVYDLAEVRANAVRLRAALPER-SEIYYSLKANPHPAILDTLREQGARAEVCSVG 80 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL-HKK 117 E+ + +T Y K + ++ L++ A + + Sbjct: 81 ELDESLAAGWPPDTLLYTGPGKRDQDLRHALRRGVREFSVDSPIGLDQLDRLAGEAGVQA 140 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170 L S+ G V GL + Sbjct: 141 RCLLRINDDQPVPGQGLTMTGVASQFGVDVSWVFADPARFTGGLNAPVVGLHLYMGTNMT 200 Query: 171 SFLCFSAML-------KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 A + ++ + LGGG L++ Sbjct: 201 EVHDLLAQFGRSLATAAQLRCALARHGVRLRVVDLGGGFGAPFACVGEPVVLSGLRDGLY 260 Query: 224 KYSV-----------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH---- 268 + ++ E G +V TL T VLD+ + ++V S H Sbjct: 261 RLLDAELPGWRDGAVRVVFESGRYLVGTAGTLVTRVLDVKRSHGRDLVVLESGINHLGGM 320 Query: 269 --VPDYLLYQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + G MV G C D++ P+ GD + +V Sbjct: 321 SGLRRLPPLNPHLLSDTAAGDLRPTMVAGPLCTPLDLWSRNAPLSPLHPGDTLQVPNVGA 380 Query: 326 YNINRKNW-FNGINMPTIAVKNVDGTIKAIR 355 Y ++ F PT + D R Sbjct: 381 YGLSASLLAFLSHPTPTEVAVDGDQVTHVSR 411 >gi|170723475|ref|YP_001751163.1| ornithine decarboxylase [Pseudomonas putida W619] gi|169761478|gb|ACA74794.1| Ornithine decarboxylase [Pseudomonas putida W619] Length = 387 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ LID Q + D + K+ A+K A + D L + +S+YE Sbjct: 25 ETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + +Y K + ++ T S+ + ++ A+ Sbjct: 83 LDKVMGRGVSADRISYGNTIKKSKDIRYFFEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + + I + + G+ FH + + + A + Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F +++ I++GGG ++ + LKE +I Sbjct: 202 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEI 261 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG +++ N L + V+ ++ + + + + Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDESIKFPIWTEK 321 Query: 285 TGP-YTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI ++ + IGDR+ + Y + FNG Sbjct: 322 KGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380 >gi|86749199|ref|YP_485695.1| Orn/DAP/Arg decarboxylase 2 [Rhodopseudomonas palustris HaA2] gi|86572227|gb|ABD06784.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris HaA2] Length = 428 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 51/383 (13%), Positives = 97/383 (25%), Gaps = 36/383 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + G +L A+K A + G +S E Sbjct: 20 GTPLFIYDAPAMRAAAARLQEALP-PGARLFFAVKANPAPDVIRLFAGEGLGAEVASGGE 78 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFK--DKAQKLHKK 117 + L + ++ K +V++L+ + A+ + Sbjct: 79 LRLALACGVAPDRIVFSGPAKTAPELRCAIEACIFAVQAESVAELDTLQALCVARGATVR 138 Query: 118 IGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173 + LR+N + PF L E + + GL H + Sbjct: 139 VALRVNLGPGGERRGGWGGPSPFGMDTDALDEVTARAARLDRLRIVGLHNHQASQTLDPA 198 Query: 174 CFSAMLKNIEKEFGHFI--TQIEWISLGGGIHFTDKDYPVK-------DFCQRLKEFSEK 224 A + +++++ GGG L Sbjct: 199 KLIARFDAFARVAASLGSRFDLQFVNFGGGFGAPFYADDAPLDLAPVRACFAALAGVFGD 258 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-----------PDYL 273 +Q E G +V V+D+ + + HV Sbjct: 259 RPLQFAAESGRYLVGPAGCYVARVVDVKRSFGVRYALLDGGIHHVLGLSGTMRSLRRPVA 318 Query: 274 LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKN 332 + + G C D + GD ++F + Y + Sbjct: 319 V--ARVGARSGEPCEPTEIAGPLCTPIDRLAGAAELPCDLAAGDLLAFANCGAYAKHASP 376 Query: 333 -WFNGINMPTIAVKNVDGTIKAI 354 F G + P + DG + Sbjct: 377 LNFLGHDWPAELMI--DGARVIV 397 >gi|312210257|emb|CBX90344.1| similar to ornithine decarboxylase [Leptosphaeria maculans] Length = 446 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 50/369 (13%), Positives = 103/369 (27%), Gaps = 31/369 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + + + VK A+KC + + + G +S E+ Sbjct: 67 FFVADLGEVYR--QHMRWKKNLSRVKPHYAVKCNPDLQVLRLMTELGMGFDCASKNEIET 124 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K + + +K K ++ LRI Sbjct: 125 VLKLGVDPSRIIYAQPCKTKSYVRYAAQSGVKQMTFDNADELYKTKQLFPDAELYLRILT 184 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + + + NV G+ FH F +++ Sbjct: 185 DDSASLCRLSQKFGASLDTTAELLELAKKLELNVVGVAFHVGSGASDPKAFIKAVQDARF 244 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F + + +GGG P+ + +++ EPG V+ Sbjct: 245 VFDQAAALGFNMHTLDVGGGFTGDVTFEPMAAVLSASLDEYFPPHIRVIAEPGRYYVSTA 304 Query: 242 TTLNTTVLDISE-------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG-------- 286 T+ V+ ++ ++ V + + + Sbjct: 305 FTIACNVIARRTVTDATLGTTSYMLYLNDGVYGNFSSIIFDHQHPQPRVLKNGNNVLYDV 364 Query: 287 ---------PYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336 + G +C DI + +GD + FED+ Y FNG Sbjct: 365 RRSGYDTPSQVEYSIWGPTCDGIDIISTSCTFPELLDVGDWLYFEDMGAYTKCSATRFNG 424 Query: 337 INMPTIAVK 345 + Sbjct: 425 FTDSHEVIY 433 >gi|154320654|ref|XP_001559643.1| hypothetical protein BC1G_01799 [Botryotinia fuckeliana B05.10] gi|150853488|gb|EDN28680.1| hypothetical protein BC1G_01799 [Botryotinia fuckeliana B05.10] Length = 531 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 98/360 (27%), Gaps = 31/360 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + + VK A+KC + L + G +S E+ Sbjct: 154 FFVADLGEVYR--QHMRWKKNLPRVKPFYAVKCNPDPQVIRLLAELGTGFDCASKGEIEQ 211 Query: 66 GH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K + +K K ++ LRI+ Sbjct: 212 VLKAGIDPTRIIYAQPCKTNSYVRYAEKNGVKQMTFDNSDELYKIKKLFPGAELFLRIST 271 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ NV G+ FH L F +++ Sbjct: 272 DDSSSLCRLSLKFGAAMDATNNLLALARELDLNVVGVSFHVGSGASDPLAFRKAVQDAHT 331 Query: 185 EFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F F + + +GGG + L+E+ +++I EPG V N Sbjct: 332 VFEQARNFGYYMHTLDVGGGFCTETFEVMASVLSDALEEYM-PKNIKIIGEPGRYYVANA 390 Query: 242 TTLNTTVLDISENIKN---------------LVIVDSSVEAHVPDYLLYQESATIYPNTG 286 TL V+ S + H ++ Sbjct: 391 FTLACNVIARRTVEDPESLEKSYMLYLNDGLYGNFSSIMFDHQNPIAQVLQTGNRSYFNT 450 Query: 287 PY--------TAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C D F + +GD + FE + Y FNG Sbjct: 451 LESCATLEGTEYSIWGPTCDGIDRISASIRFNHNLDVGDWLYFESMGAYTKCSATRFNGF 510 >gi|322706473|gb|EFY98053.1| ornithine decarboxylase [Metarhizium anisopliae ARSEF 23] Length = 447 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 103/363 (28%), Gaps = 33/363 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + + +K A+KC + L + G +S E+ Sbjct: 66 FFVADLGEVYR--QHLRWKKNLPRIKPFYAVKCNPDPKVLRLLAELGAGFDCASKGEIEQ 123 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K + N + +K ++ LRI Sbjct: 124 VLAMGTTPERIIYAQPCKTNSYVRFVKNAGVKQMTFDNADELYKIAKLYPEAELFLRIMT 183 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN---KSFLCFSAMLKN 181 + S L+ E ++ NV G+ FH +F Sbjct: 184 DDASSLCRLSMKFGAAMDTTESLLAVAKNLGLNVVGVSFHVGSGASDPLAFYKAVRDAHA 243 Query: 182 IEKEFGHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 + ++ F + + +GGG T + + F + I EPG V+ Sbjct: 244 VFQQAAEFGFTMRTLDVGGGFCGDTFEQMSSVLRDALDEFFPAGNGIDIIAEPGRYYVST 303 Query: 241 TTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL----------LY 275 T+ ++ + N S + H Sbjct: 304 AFTIACNIIARRTVEDPTLDGKGYMVYINDGVYGNFSSIMFDHQHPVAKILRSNGRTLYN 363 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWF 334 SA V G +C D E FE + +GD + FED+ Y F Sbjct: 364 TASANACNAGEGVEYSVWGPTCDGIDRISESIRFETILNVGDWLYFEDMGAYTKCSATQF 423 Query: 335 NGI 337 NG Sbjct: 424 NGF 426 >gi|313229650|emb|CBY18465.1| unnamed protein product [Oikopleura dioica] Length = 435 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 67/399 (16%), Positives = 124/399 (31%), Gaps = 44/399 (11%) Query: 3 KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++P L D + L + A+K G+ G ++S+ Sbjct: 31 ESPVLDLYDLEGLRGRFKEVQDALPSWNH--AFAIKTNPIRGVMLEAKNCGLGAEAASIG 88 Query: 62 EVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-- 117 E+ + F Y + + L+ I + + ++ K L+ Sbjct: 89 ELEHALQLGFDRSKIVYDSPVKTKAHLKHALNAGVVINLDNLEEIEKVNQLLPDLNVDVT 148 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCE 168 IG+R+NP+V K ++ S+ G E KI E + GL H + Sbjct: 149 GKIGMRVNPNVGAGKIAMSSTAGKSSKFGLPMTGEFEDEVVKIILENSWIQGLHQHIGSQ 208 Query: 169 NKSFLCFSAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 S + ++ + QI++I +GGGI + K + Sbjct: 209 GISLDQLTLGVERLVALARKINELAGTKQIKYIDVGGGIPTDYESDNEKVAYAEYAKLVN 268 Query: 224 KY-----SVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLL--- 274 + + E G ++VT + V + + V+ + + L Sbjct: 269 ERVPNLDEFNFHSEFGRSLVTKYAISVSKVETVKTWGDRITVLTHFGSNQFLREVYLPDT 328 Query: 275 YQESATIYPNTGPYTA------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + ++ G V G C GD + +K GD I D+ GY Sbjct: 329 WFHRMSVLDQNGDPKVSDLIEQDVGGPLCFQGDYLAKARALPEIKPGDYIVMHDIGGYTY 388 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + FN I P + + Y + + S Sbjct: 389 ALYSRFNSIQAPAVYGYDASENF-------YE-FKSRES 419 >gi|319408973|emb|CBI82632.1| lysine/ornithine decarboxylase [Bartonella schoenbuchensis R1] Length = 377 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 110/357 (30%), Gaps = 29/357 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N + ++ A+K A + L ++S+ E+ Sbjct: 18 PCLIVDLDVVRENYLNFEKALPQS--RIFYAIKANPAPEILSLLTSLGSSFDAASVAEIK 75 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E E ++ K A + V ++ K A + Sbjct: 76 MALEAGATAERISFGNTIKKERDIAYAHTLGISLYAVDCVEEVEKIARAAPGARVFCRIL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---M 178 N + P + + G+ FH + + Sbjct: 136 TNGEGAEWPLSRKFGCVPDMAVDVLRR--AHQLGLQAYGVSFHVGSQQTHLNAWDHALSD 193 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 + + + Q++ +++GGG LK++ + +E Sbjct: 194 VALVFERLEKEGIQLKLVNMGGGFPARYLKEVPTAQVYGIAIFDSLKKYFGNRIPETIIE 253 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284 PG AIV N + T V+ IS+ N I + + + + + Y TI+ + Sbjct: 254 PGRAIVGNAGVIRTEVVLISKKADNDNIRWVYLDVGKFNGLAETMGEAIRYP-IETIHDD 312 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 ++ G +C + D+ E + + IGD + Y + FNG Sbjct: 313 KAMEPCILAGPTCDSADVMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASVAFNGF 369 >gi|237801422|ref|ZP_04589883.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. oryzae str. 1_6] gi|330873453|gb|EGH07602.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965275|gb|EGH65535.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331024281|gb|EGI04338.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 387 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 114/361 (31%), Gaps = 30/361 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D + K+ A+K A + + L +S+YE Sbjct: 25 ETPFVVIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + G E +Y K + ++ + L A + Sbjct: 83 LDKVMSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGSKVYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I + + G+ FH + + + A Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227 + ++ F ++ I++GGG ++ + LKE Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282 +I LEPG ++++N L + V+ ++ + + + + Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319 Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379 Query: 338 N 338 Sbjct: 380 P 380 >gi|119384035|ref|YP_915091.1| Orn/DAP/Arg decarboxylase 2 [Paracoccus denitrificans PD1222] gi|119373802|gb|ABL69395.1| Orn/DAP/Arg decarboxylase 2 [Paracoccus denitrificans PD1222] Length = 414 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 45/392 (11%), Positives = 99/392 (25%), Gaps = 40/392 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + A+K + + +D SS E Sbjct: 20 GTPAYVYATDVVEERLAHLRAHLGR-WFAVSFAVKSNPNPALLGWMRDRLDYLDISSGGE 78 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + LG E + ++ + A+ + ++ ++ + A ++ + Sbjct: 79 LALGREAGWDAARISFTGPAKREAELRAAIEAGLGELVLESLREARLADAVAAEMGRVQP 138 Query: 120 LRINPSV-SYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171 + + + K S G +D E + + GL ++ + Sbjct: 139 VLVRLAPARVPKGFGDQMAGRPSPFGVDVEDAAEILPQIAALPNLRIIGLHIYSGTQCLK 198 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + F ++ G G+ + Sbjct: 199 PEAICENWRIFMQVFRDTCAALDLRPEKLIFGAGLGIPYHPGDSALDLAAIAAEIGPELD 258 Query: 228 QI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV----------- 265 LE G +V T VL + ++ + + Sbjct: 259 AFRAEPRLADARLVLELGRYLVGPAGWFVTRVLSVKQSRGTRIAICDGGLNDNLAASGNF 318 Query: 266 -EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 +Y++++ + G C + D G ++ GD I+ Sbjct: 319 GMVLRRNYVMHRVGGDEDGTRPEEKQDISGPLCTSIDKLGGGVALPRLEEGDLIAIHACG 378 Query: 325 GYNINRKN-WFNGINMPTIAVKNVDGTIKAIR 355 Y F MP + R Sbjct: 379 AYGPTASPLHFISHPMPAEVLLTGGQMQDVTR 410 >gi|269139319|ref|YP_003296020.1| putative diaminopimelate decarboxylase [Edwardsiella tarda EIB202] gi|267984980|gb|ACY84809.1| putative diaminopimelate decarboxylase [Edwardsiella tarda EIB202] gi|304559225|gb|ADM41889.1| Vibrioferrin decarboxylase protein PvsE [Edwardsiella tarda FL6-60] Length = 390 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 104/354 (29%), Gaps = 32/354 (9%) Query: 4 TPY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+ YL D L + T + +L A K A + TL ++DG ++S Sbjct: 17 TPFCGYLYDLSALRERIATMKRLLPE-HCELFYAAKANAEAPILHTLAPWVDGFEAASGG 75 Query: 62 EVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ L + E++ D + ++ +L + A++ + + Sbjct: 76 ELAWLAQQSLDSRLLFGGPGKLTRELEQACDLRVDALHVESLGELRRLAALAERRRQTLP 135 Query: 120 LRINPSVSYSKFILA--DPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 L + ++ + G D + + G FH Sbjct: 136 LLLRMNIPLPGGAETPLMMGGKPTPFGLDPADLAPALRLIGDARWLRLRGFHFHLLSHQL 195 Query: 171 SFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQ---RLK 219 S L +++ F QIE ++LGGG + + DFCQ ++ Sbjct: 196 SVDSHLALIQHCLTQVQRWCQQFHLQIEMVNLGGGFGINYRDPARHFDWADFCQRLPAVR 255 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQES 278 + E G I VLDI N+ V H + Sbjct: 256 RACRADPWLLRFECGRYISAPCGYYVMEVLDIKRNLGEWFAVGHGGTHHFRTPAAQGHDH 315 Query: 279 ATIYPNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + G+ C D+ + GD + F Y Sbjct: 316 PFQVVRRDTPPEIRDRRVTLVGQLCTPKDVLARRQPIAALATGDWLVFPLAGAY 369 >gi|149187276|ref|ZP_01865574.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] gi|148838812|gb|EDL55751.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] Length = 541 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 56/417 (13%), Positives = 123/417 (29%), Gaps = 56/417 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +P +++ + L NL N K ++ A+K + + N+ G Sbjct: 70 GSPLFVLSEDTLRGNLRRVKAAFGNYWPKPVNVMFAIKSNTNFAVRAICNEEGVGGDCFG 129 Query: 60 LYEVMLGH-EKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 EV H +T + I + I ++ ++ + A+++ + Sbjct: 130 PGEVEATHIAGADPKTIALNGTVKPELAIRKAIEYGYAIHLDSYEEIEIVERIAREVKPE 189 Query: 118 IGLRI-------------NPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KN 157 +RI N S F + + G ++ + Sbjct: 190 DKVRIAVRLKVLPDDFFDNFSPDAYPFPDFKGAMKWIKFGLLREEAKKIVNRVKEIDIFE 249 Query: 158 VNGLMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP--- 210 G H +K + K++ + Q + LGGG + Sbjct: 250 FYGFHTHLGRFSKDPAGWDALYRQYAKDVIEISRACDVQPFQVDLGGGWPREREPECRSK 309 Query: 211 -VKDFCQRLKEFSEKYS--------------VQIYLEPGEAIVTNTTTLNTTVLDISENI 255 ++++++ Q++LEPG I N TL T+V + ++ Sbjct: 310 EHMMNANTIEDYAKVVCAGMLDEFNRAGFDIPQLWLEPGRYIAGNIGTLLTSVYVVKDDQ 369 Query: 256 KNLVIVDSSVEAHVPDY--------LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH 307 + + + + T + G C+ I+ Sbjct: 370 EMDYTYTMVDASTYLATLVESQESKNPVLPANKMTQPVVAKTTEIAGPICIPS-IWESGA 428 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 ++ D ++ DV Y ++ + FN + P + + R + D + Sbjct: 429 TMPELQPKDVLAIMDVGHYAESQASQFNSLPRPATVLVKDGQSELIKRAETVEDVFA 485 >gi|104780253|ref|YP_606751.1| ornithine decarboxylase [Pseudomonas entomophila L48] gi|95109240|emb|CAK13937.1| putative ornithine decarboxylase [Pseudomonas entomophila L48] Length = 387 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ LID Q + D + K+ A+K A + D L + +S+YE Sbjct: 25 ETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + +Y K + ++ T S+ + ++ A+ Sbjct: 83 LDKVMGRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + + I + + G+ FH + + + A + Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F +++ I++GGG ++ + LKE +I Sbjct: 202 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEI 261 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG +++ N L + V+ ++ + + + + Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIETMDEAIKFPIWTEK 321 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 322 NGEAEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380 >gi|120553020|ref|YP_957371.1| ornithine decarboxylase [Marinobacter aquaeolei VT8] gi|120322869|gb|ABM17184.1| ornithine decarboxylase [Marinobacter aquaeolei VT8] Length = 391 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 118/359 (32%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID Q + + + K+ A+K A + + L +S+YE Sbjct: 29 ETPFVVIDTQTIDRQYEELVEGFPY--AKVYYAVKANPAPQILNMLRDKGANFDIASVYE 86 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + G+ +Y K + ++ T S+ + ++ A+ Sbjct: 87 LDKVMALGVTGDRISYGNTIKKAKDIRTFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 145 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + I + + G+ FH + + + A L Sbjct: 146 RILTEGTLTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGVSFHVGSQQREIGAWDAAL 205 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F +++ I++GGG ++ + L E +I Sbjct: 206 NKVKVIFERLKEEDGIELKMINMGGGFPANYITRTNELGVYAEEIARFLHEDFGDDLPEI 265 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 +EPG ++++N L + V+ IS + + + + Sbjct: 266 IIEPGRSLISNAGVLVSEVVLISRKSRTALHRWVFTDVGKFSGLIETLDESIKFPIWTEK 325 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKN-WFNGIN 338 +G ++ G +C + DI E H + IGDR+ + Y FNG Sbjct: 326 SGEGEDCVIAGPTCDSADIMYEHHKYPLPLNLAIGDRMYWLSTGAYTTTYSAIEFNGFP 384 >gi|262376838|ref|ZP_06070065.1| predicted protein [Acinetobacter lwoffii SH145] gi|262308183|gb|EEY89319.1| predicted protein [Acinetobacter lwoffii SH145] Length = 397 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 25/385 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+++K+ L N++ + K L +LK + + + S Sbjct: 6 TPAYVLNKESLRNSIKKIIDSLNKNFNKNILSYSLKTNSLPYILKEIKDLGGYAEVVSSD 65 Query: 62 EVMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E L F YN L + T ++ K + +G Sbjct: 66 EYELAKLVGFKTNKIVYNGPLKCKDTFLEALIGGSILNIETYREIEWLKLLPKNKTFNVG 125 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCENK 170 +RIN + + + +SR G + + ++GL H + Sbjct: 126 IRINIDLKEISPEDSKEDEDYSRFGFSYYTGELKKAIDEISKIGNIKIDGLHAHRTTLTR 185 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSEKY 225 S C+ + + I F + +I +GGG + P + L + + Sbjct: 186 SINCYKKICEFIGLISNKFDLNLSYIDIGGGYYGIMNSKPTFDEYFSEIANSLSRYFDLD 245 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 I +EPG AIV + T+V+D+ +N VI V + + Sbjct: 246 KTVIIVEPGNAIVASCFDFITSVIDVKKNRDFYVITTDGSRNDVDPFFKKSTYFYELLHE 305 Query: 286 GPYTAM------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + +CG +CL D + +GD+I F+ V Y + F Sbjct: 306 TKKKSDVVSLQKICGCTCLEYDKLFTIENSHLLSVGDKIVFKSVGAYTMALSPLFIRF-F 364 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P I + + +S D+YN Sbjct: 365 PKIYLLDESQYTLIRDNWSAKDFYN 389 >gi|156040381|ref|XP_001587177.1| hypothetical protein SS1G_12207 [Sclerotinia sclerotiorum 1980] gi|154696263|gb|EDN96001.1| hypothetical protein SS1G_12207 [Sclerotinia sclerotiorum 1980 UF-70] Length = 441 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 99/363 (27%), Gaps = 37/363 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + R VK A+KC + L + G +S E+ Sbjct: 64 FFVADLGEVYR--QHMRWKRNLPRVKPFYAVKCNPDPQVIRLLAELGTGFDCASKGEIEQ 121 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K + + K K ++ LRI+ Sbjct: 122 ILKTGIDPARIIYAQPCKTNSYVRYAAKQGVKQMTFDNSDELHKIKKLFPGAELFLRIST 181 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ NV G+ FH L F +++ Sbjct: 182 DDSSSLCQLSLKFGATMDTTSDLLALARELDLNVVGVSFHVGSGASDPLAFREAVQDAHT 241 Query: 185 EFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV---QIYLEPGEAIV 238 F + + + +GGG + L + E+Y +I EPG V Sbjct: 242 VFEQARTYGYYMHTLDVGGGF----CSETFEKMAAALNDALEEYMPKNIKIIGEPGRYYV 297 Query: 239 TNTTTLNTTVLDISENIKN---------------LVIVDSSVEAHVPDYLLYQESATIYP 283 N TL V+ S + H + Sbjct: 298 ANAFTLACNVIARRTVEDPVSTEKSYMLYLNDGLYGNFSSIMFDHQNPIAQVLRTGKRSY 357 Query: 284 NT--------GPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 G + G +C D F+ + +GD + FE + Y F Sbjct: 358 FDTLASQATLGGTEYSIWGPTCDGIDRISASIRFDHNLDVGDWLYFEGMGAYTKCSATRF 417 Query: 335 NGI 337 NG Sbjct: 418 NGF 420 >gi|291289439|emb|CBK55649.1| ornithine decarboxylase [Metarhizium anisopliae] Length = 447 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 103/363 (28%), Gaps = 33/363 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + + +K A+KC + L + G +S E+ Sbjct: 66 FFVADLGEVYR--QHLRWKKNLPRIKPFYAVKCNPDPKVLRLLAELGAGFDCASKGEIEQ 123 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y + + N + +K ++ LRI Sbjct: 124 VLAMGTTPERIIYAQPCETNSYVRFVKNAGVKQMTFDNADELYKIAKLYPEAELFLRIMT 183 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN---KSFLCFSAMLKN 181 + S L+ E ++ NV G+ FH +F Sbjct: 184 DDASSLCRLSMKFGATMDTTESLLAVAKNLGLNVVGVSFHVGSGASDPLAFYKAVRDAHA 243 Query: 182 IEKEFGHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 + ++ F + + +GGG T + + F + I EPG V+ Sbjct: 244 VFQQAAEFGFTMRTLDVGGGFCGDTFEQMSSVLRDALDESFPAGNGIDIIAEPGRYYVST 303 Query: 241 TTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL----------LY 275 T+ ++ + N S + H Sbjct: 304 AFTIACNIIARRTVEDPTLDGKGYMVYINDGVYGNFSSIMFDHQHPVAKILRSNGRTLYN 363 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWF 334 SA V G +C D E FE + +GD + FED+ Y F Sbjct: 364 TASANACSAGEGVXYSVWGPTCDGIDRISESIRFETILNVGDWLYFEDMGAYTKCSATQF 423 Query: 335 NGI 337 NG Sbjct: 424 NGF 426 >gi|302529561|ref|ZP_07281903.1| diaminopimelate decarboxylase [Streptomyces sp. AA4] gi|302438456|gb|EFL10272.1| diaminopimelate decarboxylase [Streptomyces sp. AA4] Length = 404 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 112/384 (29%), Gaps = 33/384 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + L+ G + ALK + L + SS E Sbjct: 12 GTPAYVYDLD-VTAQSRDQLFGLLPEGFAVYYALKANPHPEIARELREGGCRAEISSTGE 70 Query: 63 VMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + F E Y K A+ + +++ L A++ + Sbjct: 71 LANALTAGFAPEDILYTGPGKTDGELAAALAAGVRLFSVESLTDLQHVGAAAERQDTVAR 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENK 170 LR+N + + + RP G + E + G F + Sbjct: 131 CLLRVNTTQGSASTGIRMMGRPSQ-FGVDAETLPELMPLFKAVGGTKIVGAHFFTMSNAQ 189 Query: 171 SFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222 A + + + +E + +GGG + L++ Sbjct: 190 DEDALLAEYEFVLQSAAQLRQETGLPLELLDIGGGFSSPYAVPGERTDYPKLRNGLEQLL 249 Query: 223 EKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVPDY 272 + Y + E G + TL V+++ E+ + ++ +V + Sbjct: 250 DLYLPEWRSGEVELACESGRYLSGTCGTLLAGVVNVKESRGHRFVILDAGINVVGGLSGI 309 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK- 331 +A G + G C GD + + GD ++ +V Y + Sbjct: 310 GRLLPAAVGVEQVGDNPGQLVGPLCTPGDSLSKAAKLPELAAGDLLTVPNVGAYGVTASL 369 Query: 332 NWFNGINMPTIAVKNVDGTIKAIR 355 F G PT V D + R Sbjct: 370 ISFLGRPAPTEVVVRGDEVVSVSR 393 >gi|119468765|ref|ZP_01611817.1| diaminopimelate decarboxylase [Alteromonadales bacterium TW-7] gi|119447821|gb|EAW29087.1| diaminopimelate decarboxylase [Alteromonadales bacterium TW-7] Length = 407 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 110/357 (30%), Gaps = 17/357 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + + GV L ALK + TL + ++ EV Sbjct: 45 PLMVLDCEAIRRQYHALKNAL--PGVVLHFALKPLPLAAVVRTLLEEGASFDLATSGEVD 102 Query: 65 L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L + E + K +F + K A K +I +R++ Sbjct: 103 LVASQGVPSERTIHTHPIKRDSDIRDALAYGCTVFVVDNINELEKFIAYKGQAEILVRLS 162 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + L+ + + GL FH ++ + + + Sbjct: 163 FRNKDAFADLSKKFGCSPDAAIDIISYAQQLGIRIKGLSFHVGSQSPNPTKYVEAINACA 222 Query: 184 KEFGHF----ITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYS--VQIYLEPGE 235 K + + + +GGG P+ FC + + +QI EPG Sbjct: 223 KVINKVSELGLPALSTLDIGGGFPVPYSADVLPINVFCAPINVALAQLPETMQIIAEPGR 282 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290 IV ++ T +V+ ++ S + D Y + + + + Sbjct: 283 FIVASSVTSVASVMGQAQREGRTWYYLDDGIYGSFSGLMFDEAAYP-IDSAKQDGERFES 341 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 ++ G +C + D+ + + GD I + Y + FN + V N Sbjct: 342 VLAGPTCDSIDVVSDSIMLPKLNNGDLIISRMMGAYTLATATDFNFFKRAEVIVLNE 398 >gi|302854271|ref|XP_002958645.1| hypothetical protein VOLCADRAFT_84542 [Volvox carteri f. nagariensis] gi|300256034|gb|EFJ40311.1| hypothetical protein VOLCADRAFT_84542 [Volvox carteri f. nagariensis] Length = 562 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 54/378 (14%), Positives = 104/378 (27%), Gaps = 32/378 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64 +Y++D + V A+KC G+ L G +S E+ M Sbjct: 177 FYVVDLANVQRMFKAWRAAMPR--VMPYYAVKCNPEPGILKLLVAMGAGFDCASKGELDM 234 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + K + + +K K LRI Sbjct: 235 MLRMGVSPSRIIFAHPCKRASDIRYARDHGIQYTTFDTVSELYKISQMNPDFKCVLRIRA 294 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 ++ L + +V G+ FH ++ FS ++N K Sbjct: 295 DDPDARVPLGLKYGAEVSEAPVLLQTAKDLGLHVVGVSFHVGSACQNLSTFSGAIENARK 354 Query: 185 EFGHF---ITQIEWISLGGG---IHFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLEP 233 F +E + +GGG + + + + + EP Sbjct: 355 VFDEAHTLGFHMELLDIGGGFTGHFDEMGNVMFGEIANTINTALAAHFPPEMGVRVIAEP 414 Query: 234 GEAIVTNTTTLNTTV----------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 G ++TL T V + ++ + S + D P Sbjct: 415 GRYFAETSSTLLTPVYGQRDRVAHDGAVKKDYWLTDGLYGSFNCILYDGQSPAYKVVRSP 474 Query: 284 NTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG- 336 +T+ + G +C + D + ++ GD + + + Y + FNG Sbjct: 475 LLPEPADIRTFTSTLWGPTCDSADCVYKDVQLPVLRNGDWLMWNNAGAYTVAGACDFNGI 534 Query: 337 -INMPTIAVKNVDGTIKA 353 P D + Sbjct: 535 EFTTPGKLYVWSDSAVDV 552 >gi|303325885|ref|ZP_07356328.1| diaminopimelate decarboxylase [Desulfovibrio sp. 3_1_syn3] gi|302863801|gb|EFL86732.1| diaminopimelate decarboxylase [Desulfovibrio sp. 3_1_syn3] Length = 406 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 120/392 (30%), Gaps = 53/392 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D++ + + I G +L ++KC + + + G ++S EV+ Sbjct: 16 PLYVYDRKAISGRIARLRDIFN--GFDILYSMKCNSNREICRHMADCGAGIDAASKNEVL 73 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLR 121 H E ++ K + + II ++ ++L + + + +GLR Sbjct: 74 TAHALGVPREKILFSAPGKSDDDLRETLDNCLIIADSYTELQRIDAICASRNITCAVGLR 133 Query: 122 INPSVSYSKFILA-DPNRPFSRLGEK------CKDKIESE-IKNVNGLMFHNNCENKSFL 173 +NP SY + GE +D + G+ H + S Sbjct: 134 VNPDFSYGSGPCPAMRPGLPDKFGEDEEGLPAHRDFLHRLEHARPTGIHVHARSQVLSAD 193 Query: 174 CFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQRLKEFS------- 222 +++ + + +E+I GGG+ +RL+ Sbjct: 194 ALGRCFEHVARLARVWNHGLGMPLEFIDFGGGLGIPYAGEMRSLNMERLRGHLAGLLRLI 253 Query: 223 ---EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS-VEAHVPDYLLY--- 275 + Y+E G +V + T ++DI + ++ + + + + Sbjct: 254 PQDGPVPARRYVESGRFLVGDAGVFVTRIVDIKRSRGKTFVIAAGLLNHFLRPAIAGLFE 313 Query: 276 -------QESATIYPNTGPYTA--------------MVCGRSCLAGDIFGEFHFEKPVKI 314 +G T +CG C D + + Sbjct: 314 ALPLEPTYAGPCEPLWSGRGTYVPKALGLPAPAEIVTICGNLCTGMDTVARDVVLENAVV 373 Query: 315 GDRISFEDVAGYNINRKNW-FNGINMPTIAVK 345 G+ + FE+ Y F+ + Sbjct: 374 GNMLIFENAGAYAAALSPHGFSSHPEAREFLW 405 >gi|85708790|ref|ZP_01039856.1| ornithine/diaminopimelate/arginine decarboxylase, family 2 [Erythrobacter sp. NAP1] gi|85690324|gb|EAQ30327.1| ornithine/diaminopimelate/arginine decarboxylase, family 2 [Erythrobacter sp. NAP1] Length = 410 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 43/375 (11%), Positives = 95/375 (25%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++ + L + + A+K + + +DG +S E+ Sbjct: 37 TPLFVYSRSHLDLRTAELRAALPKR-IGVNFAVKANPHPAVIAHMAPLVDGFDVASSGEL 95 Query: 64 MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E ++ +D E++A + T+ + + + AQ++ + Sbjct: 96 AKLQETGIDPSRVSFAGPGKRDDELEAAIVAGATLNCESEGEGERALAIAQRVGTAPRIA 155 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIKNVNG------LMFHNNCENK---- 170 I + K G + ++G L + Sbjct: 156 IRVNPDFELKGSGMKMGGGAKPFGVDAERVPALAQTLIDGGAEWRGLHIFTGSQALSADA 215 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225 ++ + + +++GGG + ++ Sbjct: 216 IIEAQGNVIDLAARISNDIGEGLPKLNMGGGFGIPYFPGDEPLDLPAVGNALKERTADLP 275 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272 ++ LE G +V V+D + +V H Sbjct: 276 ESLSDTELCLELGRYLVGEAGVYLCRVIDRKVSHGVTYLVTDGGLHHQLAASGNFGTVVR 335 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 A + G V G C D + ++GD ++ Y Sbjct: 336 RNYPVAIANRFGCEGDDVVNVVGCLCTPLDRLADAALLPRAEVGDLVAVFCAGAYGATAS 395 Query: 332 N-WFNGINMPTIAVK 345 F G + Sbjct: 396 PENFLGHGPAAEMLV 410 >gi|195474574|ref|XP_002089566.1| GE19169 [Drosophila yakuba] gi|194175667|gb|EDW89278.1| GE19169 [Drosophila yakuba] Length = 394 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 98/357 (27%), Gaps = 23/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D L L + ++ A+KC + L G +S E+ L Sbjct: 33 LNICDLSSLERKLRLWHKLMPR--IEPHYAVKCNDDPVVVKFLADLGTGFDCASKNELKL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + + ++ +K K + +R Sbjct: 91 VLGFGVSPERIIFAHPCRPASHLKYAKEQQVVNGTVDNEYEVYKLKKHYPGSNLIVRFKS 150 Query: 125 S-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + ++ V G FH + ++ E Sbjct: 151 EAKKALCPLGDKYGCDAESDAAALMLLAKALDLKVTGTSFHVGSGCSEVEAYDRAIERAE 210 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237 F ++E + +GGG D D K L V+I EPG Sbjct: 211 SIFKVGEFVGHKMEMLDIGGGFPGIDDDMFEKIAQAVNTSLDLCFPDERVRIISEPGRFF 270 Query: 238 VTNTTTLNTTV---LDISENIKNLVIVDSSVEAHVP----DYLLYQE------SATIYPN 284 V TL V ++ L + + + Y E + Sbjct: 271 VEAAYTLICKVHAKREVRGKDGKLDTMMYYLNDGIFGAFAAMFYYPEELTPVLYLDDAES 330 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 +++ G SC A D + GD + F ++ Y + + FNG ++P Sbjct: 331 LPKLKSVIWGPSCDALDKILGDLLLPNLNPGDLLGFHNMGAYTMPIASPFNGFDVPE 387 >gi|307320235|ref|ZP_07599654.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Sinorhizobium meliloti AK83] gi|306894114|gb|EFN24881.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Sinorhizobium meliloti AK83] Length = 408 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 46/376 (12%), Positives = 105/376 (27%), Gaps = 35/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP++ D++ + + + + + + L A+K + L + +D +S E Sbjct: 33 GTPFFAYDRRLITSRVKFLRSVLP-SDIHLSYAVKANPMPAVVQHLARLVDAFDVASTTE 91 Query: 63 VMLGHEKFGGETHAY--NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + +H E+ ++ TI + ++ + + +L + + Sbjct: 92 MKTALDTPTPASHISFAGPGKTVVELTQAVAAGVTIEIESPTEAARVVEVGSRLGIRPRV 151 Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 + + K + G ++ + + + G + +N Sbjct: 152 ALRINPDFQIKGSGMRMGGGPQQFGIDVEEIPSLLQKLAAAELDFLGFHVFSGSQNLHAD 211 Query: 174 CFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 G + +++LGGG + + Sbjct: 212 ILCEASAKHVSLLIRLAGECPWPVRYLNLGGGFGIPYFEKDRPLDLLAIGATLSDLMECA 271 Query: 229 ---------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY------- 272 + +E G +V + T V+D + + +V H Sbjct: 272 VRPNLPDARVVIELGRYLVGESGVYVTRVVDRKVSRGKVYLVVDGGLHHQLAASGNFGQV 331 Query: 273 ---LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 A T V G C D+ G+ IGD + Y + Sbjct: 332 IRRNYPIAVANRMKETELENVSVVGCLCTPLDMLGDNITLPRADIGDLLVVFQAGAYGLT 391 Query: 330 RKNW-FNGINMPTIAV 344 F G +P + Sbjct: 392 ASPTAFLGHPLPVEIL 407 >gi|237726405|ref|ZP_04556886.1| diaminopimelate decarboxylase [Bacteroides sp. D4] gi|229434931|gb|EEO45008.1| diaminopimelate decarboxylase [Bacteroides dorei 5_1_36/D4] Length = 389 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 70/389 (17%), Positives = 145/389 (37%), Gaps = 27/389 (6%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 M KTPYYL+D+ KLL+N ++ + K+ + K + + + ++ Sbjct: 1 MNKTPYYLLDEDKLLSNFESMKRAFEKLWPNFKIAYSYKTNNLPWLVNWMKEHGALAEVV 60 Query: 59 SLYEVMLG-HEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLN--KFKDKAQKL 114 S E L YN +D + N + + S++ +++ Sbjct: 61 SYPEYKLAQRVGNKISNIVYNGPNKNFEGLDEAVLNGAIVNLDNFSEIEHLLLFSSSKRA 120 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHN 165 K+GLRIN + P + R G ++ ++ GL H+ Sbjct: 121 KIKVGLRINFDLESYCPNETIPGKEPGRFGFNIENGDLQKAISLLSSIPNVSIVGLHGHH 180 Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKE 220 + KS F + + + + + +++IE++ +GG + P D K Sbjct: 181 STRTKSLKIFKTIAEQM-CQMANHLSKIEYLDMGGCLFGDKPGAPTFDEYASTIVNVFKH 239 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA 279 + + +EPG A+V + + +VL + + ++ H+ P + + Sbjct: 240 YQIPSKTLLIMEPGAALVASPFSYVCSVLAVKDIQTTRLVFTDGSVKHIAPQMNAVRFMS 299 Query: 280 TIYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 ++ + A V G +C+ D F E + ++IGD I + Y+++ F Sbjct: 300 SVQTTSTKIIARQVVSGYTCIENDRFLELIDCQELQIGDTIQIYNTGAYSLSLSPLFIEY 359 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYNN 365 P + K +RE + +++ Sbjct: 360 -YPK-VIVKNGLRHKIVREAWDIDEFMQK 386 >gi|33945618|emb|CAD91350.1| ornithine decarboxylase [Glycine max] Length = 434 Score = 149 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 106/362 (29%), Gaps = 29/362 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I +P+ ++D ++ +D + K V+ A+KC + L +S Sbjct: 57 IDSPFSVLDLGVVMGLMD--KWACKLPTVQPFYAVKCNPNLSLIGALAALGSSFDCASKA 114 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y K + ++++ ++ K ++ + Sbjct: 115 EIESVLSLGVSPDRIIYANPCKSESHIRYAASVGVNVTTYDSLDEVEKIRNCHPTCELLL 174 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 ++ + + V G+ FH + Sbjct: 175 RIKPPQDSGARTSLGLKY-GALPEEVHELLQAAHEAGLKVTGVSFHIGSGGADTRAYDGA 233 Query: 179 LKNIEKEFGH----FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 + + F + ++ + +GGG + +K F + + + E Sbjct: 234 ISAAKNVFEMASGLGLPRMRVLDIGGGFTSGPPFEAAALKINAAIQASFGNEEGLVVIGE 293 Query: 233 PGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQ-------------- 276 PG TL T ++ + +++ I D Y Sbjct: 294 PGRYFAETAFTLATRIIGKRVRGDVREYWIDDGIYGTLNNIVFDYATVTCMPLACTSKPE 353 Query: 277 -ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + N Y + V G +C + D + +++ D + F ++ Y + FN Sbjct: 354 NPRCSRELNLKTYPSTVFGPTCDSIDTVLRDYKLPGLQVNDWLVFPNMGAYTTSSGTNFN 413 Query: 336 GI 337 G Sbjct: 414 GF 415 >gi|214091212|gb|ACJ63455.1| ornithine decarboxylase [Haliotis diversicolor supertexta] Length = 472 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 64/382 (16%), Positives = 113/382 (29%), Gaps = 45/382 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + V+ A+KC +G+ L +S +E+ Sbjct: 40 FFIADLGDIVAKYKKWRRLLPR--VEPFYAVKCNDDYGVLKLLGDLGTSFDCASKFEIDK 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K + + + ++ K KA ++ LRI P Sbjct: 98 VLNLGLPPSRIIYANPCKQTSFLRHAAKRNVDLMTFDNEAELLKVKAVFPDARLVLRILP 157 Query: 125 S-----VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +L EK K+ S V G+ FH + F+ + Sbjct: 158 PSNFKVQCELGMKFGCHPSKAKQLLEKAKELELS----VVGVSFHVGSGAEEAAAFAVAV 213 Query: 180 KNIEKEFG---HFITQIEWISLGGGIH-FTDKDYPVKDFCQRLKEFSEKYSV-----QIY 230 + F + +GGG ++ L + Y +I Sbjct: 214 EQAYGVFQTGLDMGFPFTLLDIGGGFPGQVTAAISFEEVVAVLNPVLDHYFPASSGVRII 273 Query: 231 LEPGEAIVTNTTTLNTTVLDISE------------------------NIKNLVIVDSSVE 266 EPG V + TL ++ V S Sbjct: 274 AEPGRYFVASAFTLTANIIAKRMVARDKSNDEHLPDQVVTGDDEPASMYYINDGVYGSFN 333 Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + D+ S + + + V G +C D E + ++IG+ I FED+ Y Sbjct: 334 CLLFDHATVTPSVLQDGSDMTFVSSVWGPTCDGLDCITEEYRLPEMQIGEWIYFEDMGAY 393 Query: 327 NINRKNWFNGINMPTIAVKNVD 348 I + FNG+ P I D Sbjct: 394 TICASSTFNGMPRPRIFYLCHD 415 >gi|306819518|ref|ZP_07453225.1| diaminopimelate decarboxylase [Mobiluncus mulieris ATCC 35239] gi|304647810|gb|EFM45128.1| diaminopimelate decarboxylase [Mobiluncus mulieris ATCC 35239] Length = 538 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 56/417 (13%), Positives = 114/417 (27%), Gaps = 75/417 (17%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP +++D ++ A K F G+ G ++S Sbjct: 66 TPVFIMDMDDFRKRARAWREAFTKTFGKGNAQVYYAGKAFLCLGLARVATAQGLGLDTAS 125 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ L + K AV + II ++++++ + + L + Sbjct: 126 SGELTLALASGIDPLRVGLHGNGKSAALLHQAVSAGIGRIIIDSLAEIPRLQRVLDALPQ 185 Query: 117 ----KIGLRINPSVSYSKFILADPNRPFSRLGEKCK------------------------ 148 + +R+ V + G + Sbjct: 186 AAMVPVMIRLTTGVHAGGHEYIATAHEDQKFGLSLEPGTHAGLCPDDSDWDGCYVVSPAD 245 Query: 149 --------DKIESEIKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWI 196 + + + GL H + +F F +++ + I Sbjct: 246 SPALAAVKLILADDRLELVGLHSHIGSQISAFAGFTAAAQKIIEFRGAVARETGYLVPEI 305 Query: 197 SLGGGIHFTDKDYPVKDFC---------QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTL 244 LGGG + +++ E++ + +EPG ++V TT Sbjct: 306 DLGGGYGVAYTAATPPGMAPHEIAEKLYRAVQDACEQHDQPLPAVSVEPGRSLVAPTTIT 365 Query: 245 NTTVLDISEN-----------IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYT 289 VL+I + + V VD + ++ L A Sbjct: 366 LYRVLNIKDQPVGTRLDGSVVYRRYVAVDGGMSDNIRPALYDAHYTATLANRLSAAPLVA 425 Query: 290 AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 V G C +GDI + GD ++ Y + + +N P + Sbjct: 426 TRVVGTHCESGDIVVRNVALPADLTEGDLLAVPMTGAYGWSMSSNYNWFTRPGVLGV 482 >gi|269976851|ref|ZP_06183825.1| diaminopimelate decarboxylase [Mobiluncus mulieris 28-1] gi|269934682|gb|EEZ91242.1| diaminopimelate decarboxylase [Mobiluncus mulieris 28-1] Length = 538 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 56/417 (13%), Positives = 114/417 (27%), Gaps = 75/417 (17%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP +++D ++ A K F G+ G ++S Sbjct: 66 TPVFIMDMDDFRKRARAWREAFTKTFGKGNAQVYYAGKAFLCLGLARVATAQGLGLDTAS 125 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ L + K AV + II ++++++ + + L + Sbjct: 126 SGELTLALASGIDPLRVGLHGNGKSAALLHQAVSAGIGRIIIDSLAEIPRLQRVLDALPQ 185 Query: 117 ----KIGLRINPSVSYSKFILADPNRPFSRLGEKCK------------------------ 148 + +R+ V + G + Sbjct: 186 AATVPVMIRLTTGVHAGGHEYIATAHEDQKFGLSLEPGTHAGLCPDDSDWDGCYVVSPAD 245 Query: 149 --------DKIESEIKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWI 196 + + + GL H + +F F +++ + I Sbjct: 246 SPALAAVKLILADDRLELVGLHSHIGSQISAFAGFTAAAQKIIEFRGAVARETGYLVPEI 305 Query: 197 SLGGGIHFTDKDYPVKDFC---------QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTL 244 LGGG + +++ E++ + +EPG ++V TT Sbjct: 306 DLGGGYGVAYTAATPPGMAPHEIAEKLYRAVQDACEQHDQPLPAVSVEPGRSLVAPTTIT 365 Query: 245 NTTVLDISEN-----------IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYT 289 VL+I + + V VD + ++ L A Sbjct: 366 LYRVLNIKDQPVGTRLDGSVVYRRYVAVDGGMSDNIRPALYDAHYTATLANRLSAAPLVA 425 Query: 290 AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 V G C +GDI + GD ++ Y + + +N P + Sbjct: 426 TRVVGTHCESGDIVVRNVALPADLTEGDLLAVPMTGAYGWSMSSNYNWFTRPGVLGV 482 >gi|227876243|ref|ZP_03994359.1| diaminopimelate decarboxylase [Mobiluncus mulieris ATCC 35243] gi|227843204|gb|EEJ53397.1| diaminopimelate decarboxylase [Mobiluncus mulieris ATCC 35243] Length = 538 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 56/417 (13%), Positives = 114/417 (27%), Gaps = 75/417 (17%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP +++D ++ A K F G+ G ++S Sbjct: 66 TPVFIMDMDDFRKRARAWREAFTKTFGKGNAQVYYAGKAFLCLGLARVATAQGLGLDTAS 125 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ L + K AV + II ++++++ + + L + Sbjct: 126 SGELTLALASGIDPLRVGLHGNGKSAALLHQAVSAGIGRIIIDSLAEIPRLQRVLDALPQ 185 Query: 117 ----KIGLRINPSVSYSKFILADPNRPFSRLGEKCK------------------------ 148 + +R+ V + G + Sbjct: 186 AATVPVMIRLTTGVHAGGHEYIATAHEDQKFGLSLEPGTHAGLCPDDSDWDGRYAVSPAD 245 Query: 149 --------DKIESEIKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWI 196 + + + GL H + +F F +++ + I Sbjct: 246 SPALAAVKLILADDRLELVGLHSHIGSQISAFAGFTAAAQKIIEFRGAVARETGYLVPEI 305 Query: 197 SLGGGIHFTDKDYPVKDFC---------QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTL 244 LGGG + +++ E++ + +EPG ++V TT Sbjct: 306 DLGGGYGVAYTAATPPGMAPHEIAEKLYRAVQDACEQHDQPLPAVSVEPGRSLVAPTTIT 365 Query: 245 NTTVLDISEN-----------IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYT 289 VL+I + + V VD + ++ L A Sbjct: 366 LYRVLNIKDQPVGTRLDGSVVYRRYVAVDGGMSDNIRPALYDAHYTATLANRLSAAPLVA 425 Query: 290 AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 V G C +GDI + GD ++ Y + + +N P + Sbjct: 426 TRVVGTHCESGDIVVRNVALPADLTEGDLLAVPMTGAYGWSMSSNYNWFTRPGVLGV 482 >gi|223993801|ref|XP_002286584.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220977899|gb|EED96225.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 484 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 73/416 (17%), Positives = 127/416 (30%), Gaps = 55/416 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y +L L G+ + A+K + +SS YE Sbjct: 62 GTPLYAYSLSQLAAAATATLAFPNAFGLTVRYAMKACPNGSILKYFLSRGICIDASSGYE 121 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 V E + + + D ++ I +VSQL + +K+G+R Sbjct: 122 VRRAMSMGVPAEKISLSSQELPADFDELIGLGVKINACSVSQLERIGKAFPNTSQKVGIR 181 Query: 122 INP-------SVSYSKFILADPNRPFSRLGEKCK--------DKIESEIKNVNGLMFHNN 166 INP S S + F + P S G + D + V + H Sbjct: 182 INPGVGSGGFSSSTTGFSKTNVGGPSSSFGIWHELVTDGTVPDIVTKYGLEVERIHTHIG 241 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD--------YPVKDFCQRL 218 + + S + F I ++LGGG Sbjct: 242 SGSDPAIWQS--VATRSLSFCKLWDTITTLNLGGGYKVGRNPGEKTTDLNEIGAPVADAF 299 Query: 219 KEFSEKYSV--QIYLEPGEAIVTNTTTLNTTVLDI-------SENIKNLVIVDSSVEAHV 269 ++F+++ Q+ +EPG +V N L TT+ D S+ + +D+ + + Sbjct: 300 RDFAKETGRELQMEIEPGTYLVANAGALVTTIQDKVSTKSASSDEGHIYLKMDAGMTDVL 359 Query: 270 PDYLLYQESATIYPNT---------GPYTAMVCGRSCLAGDIFG---------EFHFEKP 311 L + +V G C +GD+ E + Sbjct: 360 RPSLYGAIHPITILPASGKSSDIGTATESVVVVGHCCESGDLMTPKPGEPEALEERVLRT 419 Query: 312 VKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365 +IGD + Y +N + +++G + IR S Y N Sbjct: 420 AEIGDIAVMDGSGAYCAGMSTKNYNSFPEAPEVLVDLEGKVHLIRKRQSLQQIYEN 475 >gi|196233372|ref|ZP_03132216.1| Orn/DAP/Arg decarboxylase 2 [Chthoniobacter flavus Ellin428] gi|196222512|gb|EDY17038.1| Orn/DAP/Arg decarboxylase 2 [Chthoniobacter flavus Ellin428] Length = 485 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 55/417 (13%), Positives = 116/417 (27%), Gaps = 54/417 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ ++ L A V+ + K + +Q S Sbjct: 46 GSPLFVFSEKALREKYREAHRAFSRRYPDVQFAWSYKTNYLNAICRVFHQEGSIAEVVSG 105 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 +E G +N +K+ N I + + +L + + + Sbjct: 106 FEYEKARRNGVDGSKIIFNGPHKERADLERAVNERAMIQVDNIDELLTLASIVRDRTEPV 165 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKC---KDKIESEIKNVNGLMFHNNCENKSFLCF 175 + + + + GE + + GL H + Sbjct: 166 SIALRVHLQTGTHTVWSKFGFNGDDGEVLQIIRRITTLHNLRLQGLHCHVGTFILDPENY 225 Query: 176 SAMLKNI---EKEFGHFIT-QIEWISLGGGIHFTDKDYPVK-----------DFCQRLK- 219 + + E QI +++LGGG + + + + + Sbjct: 226 RVAARRLVELAIEAEKIGAGQIRYLNLGGGFASHARLHYQYLPPEQTTPSLDRYAEAICE 285 Query: 220 -----EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD------------ 262 + + ++YLE G A+V + L ++V+ + + + Sbjct: 286 TIIGLWPAGRDLPRLYLETGRALVDDAGYLISSVVAVKKRHLPSQMQTAMAAYGKSAAVM 345 Query: 263 -----------SSVEAHVPDYLLYQES--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309 + + YQ P V G C+ D+ E Sbjct: 346 PQGNSRHALVLDAGINLLYTTAWYQPKILPARPCLDTPEPTTVFGCLCMNIDVIREDAPL 405 Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + GD++ V YNI + F P + + + + + IR DY L Sbjct: 406 PSLTTGDQVVLHPVGAYNITQSMQFITY-RPAVVMIDSERKVHVIRRRENLDYVQEL 461 >gi|195430116|ref|XP_002063103.1| GK21743 [Drosophila willistoni] gi|194159188|gb|EDW74089.1| GK21743 [Drosophila willistoni] Length = 397 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 104/359 (28%), Gaps = 26/359 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + + V A+KC + L + G +S E+ L Sbjct: 35 LNICDLSSVERKFHLWQRLLPR--VHPFYAVKCNDDPMIVQVLAKLGAGFDCASKNELKL 92 Query: 66 GH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + A ++ +K + +R Sbjct: 93 VLGSAVTPERIIFANPCRPVSHLAYAEKHGVTNGTVDNEFEIYKLYKHYPSSNLIVRYKS 152 Query: 125 SVSYSKFILADPNRPFSR-LGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + ++ NV G H ++ ++ + Sbjct: 153 EAKEAQCPLGDKFGCDADGDATALMLLAKALELNVTGTSVHVGSGCSELGAYNRAIRKAK 212 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ----IYLEPGEA 236 F + + +GGG +D + + + + ++Y I EPG Sbjct: 213 HLFQFGELLDFDMNLLDIGGGFPGSDD-EKFEKIAEDVNKSLDRYFPDENVEIIAEPGRF 271 Query: 237 IVTNTTTLNTTVLDISE------------NIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 V + TL + E + S + D+ + + Sbjct: 272 FVASALTLICKIHAKREVRNPSTGKLDTVMYYLNDGIYGSFNCILYDHQVIIAEHYLNST 331 Query: 285 T--GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + +++ G +C A D+ + + GD I F ++ Y + + FNG +P Sbjct: 332 EDLPQFKSLLFGPTCDALDMITDNLQLPNLNRGDLIGFPNMGAYTVPVASPFNGFEVPK 390 >gi|326433060|gb|EGD78630.1| hypothetical protein PTSG_01608 [Salpingoeca sp. ATCC 50818] Length = 444 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 50/375 (13%), Positives = 106/375 (28%), Gaps = 40/375 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + LL N +L A K + ++ G SL EV Sbjct: 63 PVNVYHVPTLLQRARELKAALTNVN-RLFFATKSNTHPRLVRAIHSLGFGLECVSLQEVE 121 Query: 65 --LGHEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + + + + A + + + V L + D + + Sbjct: 122 YVMAATHASPDHVLFTPNFATRDEYAAAIKLGVHVTVDNVYCLRAWPDVFTGASVALRID 181 Query: 122 INPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + K ++ ++ +G + + V GL H+ ++ Sbjct: 182 PVKGRGHHKHVVTAGSQSKFGMGIEDMPEVVQICKDNNITVVGLHCHSGSGIFDPATWNE 241 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPG 234 ++++ +GGG+ + + ++ E +++EPG Sbjct: 242 H-AACLIAVAKQFPAVKFMDIGGGLGVPYRFTEKRLNLDKVNEELAAILHPGIDLWMEPG 300 Query: 235 EAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES--------------- 278 +V+ L V I V + + + + L Sbjct: 301 RFLVSECGVLLARVSQIKTKAGVKFVGITAGMNNLLRPALYGSHHELANLSHLARTRRGA 360 Query: 279 -----------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326 AT + VCG C + DIFG + GD I + Y Sbjct: 361 TDGATDGATDGATDGDSGACEPVTVCGPICESADIFGRDRMLPVDTREGDVILVDTTGAY 420 Query: 327 NINRKNWFNGINMPT 341 + ++++N + Sbjct: 421 GVTMESYYNMRPRAS 435 >gi|295812475|gb|ADG34834.1| ornithine decarboxylase [Sporothrix schenckii] Length = 410 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 55/376 (14%), Positives = 102/376 (27%), Gaps = 48/376 (12%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + VK A+KC + L + +G +S E+ Sbjct: 24 FFVADLGEVYR--QQLRWKMNLPRVKPFYAVKCNPDPKVLRLLAELGNGFDCASKAEIEQ 81 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y K + + F+ +L K + + Sbjct: 82 VLDMGVDPSRIIYAQPCKTNSYVRYVASKGVRAMTFDNADELRKIAKLYPDAELFLRILT 141 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S S + L + G NV G+ FH F +++ Sbjct: 142 DDSSSLCRLSLKFGASLDTTDGLLA--LARELNLNVVGVSFHVGSGASDPQAFLKAVQDA 199 Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237 F + + +GGG D + + F V + EPG Sbjct: 200 YAVFSQAATHGYSLRTLDVGGGFCSDDSFEGMATVLRDALDEYFPPHLGVSLIAEPGRYF 259 Query: 238 VTNTTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDY--- 272 V++ T+ ++ + N S + H Sbjct: 260 VSSVFTIACNIIARRTLEDPEQAVDGNARRDPSYMVYVNDGLYGNFSSIMFDHQNPVAKV 319 Query: 273 ----------LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFE 321 + T + G +C D E F + + +GD + FE Sbjct: 320 LTSSARFLYDTEGAHATTADAGAAGTEYSIWGPTCDGIDRITESIRFRQTLDVGDWLYFE 379 Query: 322 DVAGYNINRKNWFNGI 337 D+ Y FNG Sbjct: 380 DMGAYTSCSATRFNGF 395 >gi|55853671|gb|AAV67809.1| siderophore synthesis decarboxylase [Ralstonia solanacearum] Length = 413 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 102/377 (27%), Gaps = 42/377 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 YL D L G +L A+K + + L+ + G +SL EV+ Sbjct: 19 AYLYDLDHLRERAGRL-SAMLPPGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVVR 77 Query: 66 GHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E + K A+ + I + QL + A+++ ++ + + Sbjct: 78 AREVGAHARIVFGGPGKTDAELQGALERGVELIHVESELQLRRLDAVARRMGRRARVLLR 137 Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 + + + + + V GL H Sbjct: 138 VNPNPLSADSAGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLARGLAGVEVVGLHLHALSN 197 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKE 220 N L + ++ +++GGGI + + FC L Sbjct: 198 NLDADSHLALMRHYLALALRLRREHGLTLDTLNVGGGIGVDYVQPSHAFDWRRFCDGLGA 257 Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277 + +I E G I + T V+DI N V H Sbjct: 258 LLAEAGAGCRIVFECGRFIAADCGYYVTEVVDIKRNHGKWFAVLRGGTHHFRLTASWQHN 317 Query: 278 SATIYPNTGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 +T +CG C D+ + +GDRI F+ Sbjct: 318 HPFAIVPNAQWTYPFARPSVQAQAVTLCGELCTPKDVLARDVVVDRLSVGDRIVFQLAGA 377 Query: 326 YN-INRKNWFNGINMPT 341 Y + F P Sbjct: 378 YGWHISHHDFLSHPHPE 394 >gi|78223226|ref|YP_384973.1| Orn/DAP/Arg decarboxylase 2 [Geobacter metallireducens GS-15] gi|78194481|gb|ABB32248.1| Orn/DAP/Arg decarboxylase 2 [Geobacter metallireducens GS-15] Length = 419 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 52/385 (13%), Positives = 117/385 (30%), Gaps = 37/385 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+YL D K+ ++ ++LL A+K + + +DG +S E Sbjct: 25 GTPFYLYDLDKVKEKCAAVRKAFGDS-LELLYAVKANPNRELLAAMRGEVDGLDIASAGE 83 Query: 63 VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E + ++ +D ++ + I ++ +LN +D + + Sbjct: 84 LERALETGYDAGCISFAGPGKTRDELRRSLEAGVGCISVESLRELNDLRDLVRAGSHRAY 143 Query: 120 LRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENK 170 + + + + S+ G ++ + + G+ + + Sbjct: 144 ILVRVNPQLLIRDFAVKMGGKASQFGIDEEELPSALDFIKANADAFDFKGIHIYAGTQCL 203 Query: 171 SFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFS 222 + + L N + + I++GGG+ + + + + Sbjct: 204 NEEALAQNLANTLAIAARITTDYGMECRVINIGGGLGVSYYEEHPGLDLDKLALLFRAEF 263 Query: 223 EKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-------- 268 ++Y +I LE G +V T V+ + V H Sbjct: 264 DRYREATGTKPRILLELGRFLVAEAGIYVTRVVSEKLSRGEQFYVLDGGMNHHLSASGNL 323 Query: 269 -VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + Y P + G C D+ G+ + ++GD + F + Y Sbjct: 324 GMTIRKNYLVRNLSRPGAERIICTLVGPLCTPLDLMGKGVTVEVPEVGDLVGFLNSGSYG 383 Query: 328 INRKN-WFNGINMPTIAVKNVDGTI 351 + F G P + Sbjct: 384 YSASPLLFLGHGEPCELLVEGKDVR 408 >gi|332524864|ref|ZP_08401053.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2] gi|332108162|gb|EGJ09386.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2] Length = 415 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 51/375 (13%), Positives = 100/375 (26%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y +D+ L + AGVKL A+K + + +DG +S E+ Sbjct: 42 TPFYAVDRGLLRRRVAELRAALP-AGVKLHYAMKANPMPALVAFMAGLVDGIDVASGGEL 100 Query: 64 MLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + E +D E+ ++ + + +L A + + Sbjct: 101 KVALDAGADAAEVSFAGPGKRDAELRQAVAARVLVNVESERELAVLAAAAAEFGVPARVA 160 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF-- 172 + + K + G I G +N Sbjct: 161 VRVNPDFELKGSGMRMGGGAKQFGVDADRVPALLARIGELGLAFEGFHLFAGSQNLRAEA 220 Query: 173 --LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-- 228 + + H + +++LGGG + + + + + Sbjct: 221 ICEAQRQSYELALRLAAHAPAPLRFLNLGGGFGIPYFPGETRLDLAPIGANLQALAERAR 280 Query: 229 -------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272 + +E G V T V+D + + +V H Sbjct: 281 TELPEASLVIELGRYFVGEAGVYVTRVVDRKLSRGQVFLVCDGGLNHHLAASGNFGQVVR 340 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + TA G C D+ + P +GD + Y + Sbjct: 341 KNYPVTVGNRLGDEARETATAVGPLCTPLDLLADRMSLPPADVGDLVVVFQSGAYGASAS 400 Query: 332 NW-FNGINMPTIAVK 345 F G T + Sbjct: 401 PQAFLGHAPVTEVLV 415 >gi|34495197|emb|CAE02644.1| ornithine decarboxylase [Lotus japonicus] Length = 422 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 116/350 (33%), Gaps = 25/350 (7%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 ++D ++ +D ++ K V+ A+KC + L +S E+ + Sbjct: 63 VLDLGVVMELMD--KWVTKFPTVQPFYAVKCNPDISLIGALAALGSSFDCASKAEIQIVL 120 Query: 68 E-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K A + +++V +++K + ++ LRI Sbjct: 121 SLGISPDRIVYANPCKSESDIKYAATVGVNLATYDSVYEVDKVQK--WHPKCELLLRIKY 178 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + L + E+ NV G+ FH L S ++ + Sbjct: 179 DSEGALASLGVKYGALPEEVPELLKAAEAAGVNVTGVSFHIGSGGADPLALSGAIEAAKS 238 Query: 185 EFGHFIT----QIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 F ++ + +GGG + K L F + + + EPG Sbjct: 239 VFEMASHFGMSRMSILDIGGGFTCGPELDVAATKVKAAILAHFGDHQGLVVIAEPGRYFT 298 Query: 239 TNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 TL + V+ I++ + + A + L Q++ T Sbjct: 299 ETAFTLVSRVIGKRVRGELREYWINDGVYGSISNIIYDHATIRCAPLRQKNLTCVD-AKT 357 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 Y V G +C DI + + +++ D + F ++ Y I+ FNG Sbjct: 358 YPTTVFGPTCDCIDIVLKDYQLPELQVNDWLVFPNMGAYTISSGTNFNGF 407 >gi|171692171|ref|XP_001911010.1| hypothetical protein [Podospora anserina S mat+] gi|170946034|emb|CAP72835.1| unnamed protein product [Podospora anserina S mat+] Length = 510 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 50/373 (13%), Positives = 103/373 (27%), Gaps = 45/373 (12%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + VK A+KC + L +G +S E+ Sbjct: 121 FFVADLGEVYR--QHLRWKMNLPRVKPFYAVKCNPDPMLLKLLAALGNGFDCASKAEIEQ 178 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 Y K + F+ +L K + + + Sbjct: 179 VLRMGVDPSRIIYAQPCKTNSYVRYVAQQGVRAMTFDNADELRKIARFYPEAELYLRILT 238 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + S + + S G NV G+ FH F +++ Sbjct: 239 DDTSSLCRLSMKFGASLDSTDGLLA--LARDLNLNVVGVSFHVGSGASDPSAFLKAVRDS 296 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237 F + ++ + +GGG + + + F + + EPG Sbjct: 297 HMVFQQAASYGFSLKTLDVGGGFCADNTFEQMAGVLREALDEYFPAHSGINLIAEPGRFY 356 Query: 238 VTNTTTLNTTVLD--------------ISENIKNLVIVDSSVEAHVPDYLLYQESA---- 279 + TL V+ + + ++ V+ + + + + Sbjct: 357 ASAAYTLACNVIARRTIQDTALINNGTTTPDPSYMLYVNDGLYGNFSSIMFDHQHPEAKV 416 Query: 280 --------------TIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVA 324 + + G +C D E F + +GD + FED+ Sbjct: 417 LRAGGQTLYDTPAANGMDDRSGVEYSIWGPTCDGIDRITESIRFPVVLDVGDWLYFEDMG 476 Query: 325 GYNINRKNWFNGI 337 Y FNG Sbjct: 477 AYTKCSATTFNGF 489 >gi|126697432|gb|ABO26673.1| ornithine decarboxylase 1 [Haliotis discus discus] Length = 472 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 63/380 (16%), Positives = 114/380 (30%), Gaps = 41/380 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + V+ A+KC +G+ L +S E+ Sbjct: 40 FFIADLGDIVAKYKKWRRLLPR--VEPFYAVKCNDDYGVLKVLADLGTSFDCASKMEIDK 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K + + + ++ K KA ++ LRI P Sbjct: 98 VLNLGISPSRIIYANPCKQTSYVRHAAKRNVDLMTFDNEAELLKVKAVFPDARLVLRILP 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 ++ + + F K K +E NV G+ FH + F+ ++ Sbjct: 158 PSNFK--VRCELGMKFGCHPAKAKQLLETAKELELNVVGVSFHVGSGAEEAAAFAVAVEQ 215 Query: 182 IEKEFG---HFITQIEWISLGGGIH-FTDKDYPVKDFCQRLKEFSEKYSV-----QIYLE 232 F + +GGG ++ L + Y QI E Sbjct: 216 AHGVFQTGLDMGFPFTLLDIGGGFPGQVTAAISFEEVVDVLSPALDHYFPASSGVQIIAE 275 Query: 233 PGEAIVTNTTTLNTTVLDIS------------------------ENIKNLVIVDSSVEAH 268 PG V + TL ++ V S Sbjct: 276 PGRYFVASAFTLTANIIAKRVVARDKSNHEHLPDQVVTGDDEPAYMYYINDGVYGSFNCL 335 Query: 269 VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + D+ S + + + V G +C D E ++IG+ I FED+ Y + Sbjct: 336 LFDHATVTPSVLQDGSDMTFVSSVWGPTCDGLDCIMEDCRLPEMQIGEWIYFEDMGAYTM 395 Query: 329 NRKNWFNGINMPTIAVKNVD 348 + FNG+ P + D Sbjct: 396 CCASTFNGMPRPRVFYLCHD 415 >gi|170736652|ref|YP_001777912.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia cenocepacia MC0-3] gi|254249328|ref|ZP_04942648.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia PC184] gi|124875829|gb|EAY65819.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia PC184] gi|169818840|gb|ACA93422.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia cenocepacia MC0-3] Length = 402 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 39/375 (10%), Positives = 94/375 (25%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+++ + + + + ++L ++K + L +DG +S E+ Sbjct: 29 TPFFVYARAAIDARVCQLRAKLPAS-IQLHYSIKANPMPAVVHHLAMRIDGFDVASGAEL 87 Query: 64 MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + + E+ +++ + +++QL+ + + + Sbjct: 88 ALALNAGMPPDQIGFAGPGKTREELRCAVASGVNVHIESLTQLHLLAALGWEQGLRPRVT 147 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 I + ++ G + + + + G + Sbjct: 148 IRVNPDFQITHAGMRMGGGATQFGIDAEQVPALLQELSTCDVTLAGFHVFWGSQCLRPAT 207 Query: 175 FSAMLKNIEKEFGHFITQI----EWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221 + + + + +++LGGG + Sbjct: 208 VVEAQRRSAELVMKLASDLPLPPRYVNLGGGFGIPYFEGEVPLDLDAVAQPMHAWLSRMH 267 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 V+ LE G +V V+D + +V H Sbjct: 268 RALPGVRPVLEFGRYLVGEAGAYVCRVIDRKVSRGTTFLVTDGGLHHHLAASGNFGQVLR 327 Query: 282 YPNT----------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + G SC D + IGD + Y + Sbjct: 328 RNFPVVLGNRLGDTPTERCHIVGCSCTPLDRIVDDVLLPEAHIGDFVVVLQSGAYARSAS 387 Query: 332 NW-FNGINMPTIAVK 345 F G + Sbjct: 388 PRDFLGHPEAIEMLV 402 >gi|258654007|ref|YP_003203163.1| Orn/DAP/Arg decarboxylase 2 [Nakamurella multipartita DSM 44233] gi|258557232|gb|ACV80174.1| Orn/DAP/Arg decarboxylase 2 [Nakamurella multipartita DSM 44233] Length = 508 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 40/396 (10%), Positives = 88/396 (22%), Gaps = 35/396 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + L + V++ +LK + L S E Sbjct: 20 GTPLFVYDAEVLAASFGELREALP-PAVEIFYSLKANPNVSVVGVLAAAGARAEVCSRAE 78 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119 + + K I+ + +L + A+ + Sbjct: 79 LRTALLAGIDPADIIFLGPSKSATDLEACLTAGIYAIVAESFDELGELDRIARSRQVRPR 138 Query: 120 LRINPSVSYSKF-ILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE--- 168 + + + + G +V G+ + Sbjct: 139 VMLRVNPRRGTTGAGLSMGGKPRQFGIDESQLEHCGSVPERFPQLDVCGIHVYLGTRLLD 198 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + A L+ E+ ++ + +GGG+ ++ E Sbjct: 199 ASLFTENVRATLELAERIAAVTGIRLAAVDVGGGVGVAYFAGESDPDLSGVRAELEPLVA 258 Query: 228 QI---------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH------VPDY 272 E G + V + +++ H + Sbjct: 259 SFRQRHPRVRLMCESGRFLAARAGEYVVRVGAVKQSMGQWFASTDGGTHHHQAAAGIGSV 318 Query: 273 LLYQESATIYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + + T V G C D +++GD I Y + Sbjct: 319 VPRNFPVRLLNRTSAAPAGAWQVTGSLCTPNDTLARNVELPQLQVGDLIGIGRSGAYAAS 378 Query: 330 RKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 F + + R + D Sbjct: 379 ASPGRFLSHGYAAEVLLHDGDGHLVRRRDNPLDLLR 414 >gi|226493711|ref|NP_001142154.1| hypothetical protein LOC100274319 [Zea mays] gi|194707370|gb|ACF87769.1| unknown [Zea mays] Length = 412 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 103/350 (29%), Gaps = 19/350 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 T +++ +L V+ A+KC + L + G +S E+ Sbjct: 53 TAFHVFRIDNVLELYSAWRRGL--PDVRPYYAVKCNPEPALLGALAELGAGFDCASRAEI 110 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y K + + T + + + L Sbjct: 111 EAVLALGVPPSSIIYANPCKSEPHLEYAAAAG-VNLTTYDTEEEVAKVKRCHPRCELLLR 169 Query: 123 NPSVSYSKFILADPNRPFSRLGE--KCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 S+ + +R E ++ V G+ FH + A ++ Sbjct: 170 LKGPDGSETTCDLGTKYGARADEVVPLLRAVQRAGVTVAGVSFHVGSPVARVGVYRAAIE 229 Query: 181 NIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPG 234 F + + + +GGG + F + V++ EPG Sbjct: 230 AARAAFDEAAALGMPPMRVLDIGGGFTAGASFDDAAAVINDALARSFGDLPCVEVIGEPG 289 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP-- 287 TL V+ + S+ + D+ + + P G Sbjct: 290 RYFCETAFTLAARVIGKRTRGEVREYWIDDGLYGSLNNILMDHKVPRPRPLATPRPGDRT 349 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 +T+ V G +C + D + + +GD + F+++ Y+ + FNG Sbjct: 350 HTSTVFGPTCDSQDEVVTGYQLPEMSVGDWLVFDNMGAYSTGSGSKFNGF 399 >gi|20091552|ref|NP_617627.1| ornithine decarboxylase [Methanosarcina acetivorans C2A] gi|19916709|gb|AAM06107.1| ornithine decarboxylase [Methanosarcina acetivorans C2A] Length = 390 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 124/367 (33%), Gaps = 30/367 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID QK+ + + + K+ A+K + L +++YE Sbjct: 30 ETPFLVIDLQKIERSYEELVEHM--PFAKIHYAVKANPMDRVVLALKDKGSNFDVATIYE 87 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E +Y K + A + ++ S L K +A Sbjct: 88 LDQVLRLGVEPERISYGNTIKKEKDIAYAYEKGVRLFVTDSESDLKKLSREAPGSRVFFR 147 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + P K +++E + GL FH + + + Sbjct: 148 ILTESDGADWPLSRKFGSHPDLIY----KLILKAEKLGLEPYGLSFHVGSQQRDIGQWDN 203 Query: 178 MLKNIEKEF---GHFITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSE----KYSVQ 228 + + F Q++ I+LGGG + ++ + + ++ F + + Sbjct: 204 AISKCKYLFEAAAEKGIQLKMINLGGGFPAKYQAQANDLETYAREIRRFLHDDFGEELPE 263 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYLLYQESATIYP 283 I +EPG ++V + + + V+ IS+ + ++ + + Sbjct: 264 ILIEPGRSLVADAGIIVSEVVMISKKARFNQYKWVYLDIGKFGGLIETLDECIKYPIFCD 323 Query: 284 NTG-PYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI ++ F ++ G+R Y + + FNG Sbjct: 324 KKGCAEEVILAGPTCDSMDILYEHHKYSFPHTMREGNRAYIFTTGAYTQSYCSVNFNGFP 383 Query: 339 MPTIAVK 345 + Sbjct: 384 PLKAYLI 390 >gi|24586474|ref|NP_477053.2| ornithine decarboxylase 2 [Drosophila melanogaster] gi|66774204|sp|P40808|DCOR2_DROME RecName: Full=Ornithine decarboxylase 2; Short=ODC; AltName: Full=dODC2 gi|21627754|gb|AAF59149.2| ornithine decarboxylase 2 [Drosophila melanogaster] Length = 393 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 96/357 (26%), Gaps = 24/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D L L + ++ A+KC + L G +S E+ L Sbjct: 33 LNICDLSSLERKLRLWHKLMPR--IEPHYAVKCNDDPVVVKFLADLGTGFDCASKNELKL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + + ++ +K + + +R Sbjct: 91 VLGLGVSPERIIFAHPCRPASHLRYAKEQQVVNGTVDNEYEIYKLRKHYPDSNLIVRFKS 150 Query: 125 S-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + ++ V G FH + ++ E Sbjct: 151 EAKKALCPLGDKYGCDAEADAAALMLLAKALGLKVTGTSFHVGSGCSEVEAYDRAIEKAE 210 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237 F ++E + +GGG D + + ++ ++I EPG Sbjct: 211 NIFKVGEMIGHKMELLDVGGGFPGIDDEMFEEIAQSVNTSVELRFPDKRIRIISEPGRFF 270 Query: 238 VTNTTTLNTTV---LDISENIKNLVIVDSSVEAHVPDYLL-YQESATIYPNT-------- 285 V TL V ++ L + + + Sbjct: 271 VEAAYTLICKVHAKREVRSKDGKLDTMMYYLNDGIFGAFAGMFYYPEEVAPELYLDEAES 330 Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 +++ G SC A D + GD + F ++ Y + + FNG ++P Sbjct: 331 LPKLKSVIWGPSCDAMDKI-SDLLLPNLNPGDLLGFRNMGAYTMPIASPFNGFDVPE 386 >gi|194863622|ref|XP_001970531.1| GG23324 [Drosophila erecta] gi|190662398|gb|EDV59590.1| GG23324 [Drosophila erecta] Length = 399 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 97/357 (27%), Gaps = 23/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D L L + ++ A+KC + L G +S E+ L Sbjct: 33 LNICDLSNLERKLRLWHKLMPR--IEPHYAVKCNDDPVVVKVLADLGTGFDCASKNELKL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + + ++ +K + + +R Sbjct: 91 VLGLGVSPERIIFAHPCRPASHLKYAKEQQVVNGTVDNEFEVYKLRKHHPDSNLIIRFKS 150 Query: 125 S-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + ++ V G FH + ++ E Sbjct: 151 EAKKALCPLGDKYGCDAETDAAALMLLAKALDLKVTGTSFHVGSGCSEVEAYDRAIEKAE 210 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237 F ++E + +GGG D + + +K V+I EPG Sbjct: 211 SIFKVGELIGHKMELLDVGGGFPGADDEMFEEIAHAVNTSVKLRFPDERVRIISEPGRFF 270 Query: 238 VTNTTTLNTTV---LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------ 288 V TL V ++ L + + + Y Sbjct: 271 VEAAYTLICKVHAKREVRSQDGKLDSMMYYLNDGIFGAFAGMFYYPEEMAPELYLDEAAS 330 Query: 289 ----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 +++ G SC A D + GD + F ++ Y + + FNG ++P Sbjct: 331 LPKLKSVLWGPSCDALDKISGHLLLPSLNPGDLLGFRNMGAYTMPIASPFNGFDVPE 387 >gi|229119086|ref|ZP_04248424.1| Decarboxylase [Bacillus cereus Rock1-3] gi|228664370|gb|EEL19873.1| Decarboxylase [Bacillus cereus Rock1-3] Length = 411 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 58/395 (14%), Positives = 110/395 (27%), Gaps = 43/395 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ + +L + + + + + +LK + L SS+ E Sbjct: 12 GSPLYVYNLAELTKSYQKLINSLPDKSI-IYYSLKANPNPEITRHLINLGCYAEISSIGE 70 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + E Y K + N + ++L D + K I Sbjct: 71 LDTVLDVGGPPEHCLYTGPGKTKKEIQYALSKNVSHFSVESFNELEIINDLTKNHSKLIN 130 Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEK--------CKDKIESEIKNVNGLMFHNNCENK 170 + + + S++ S+ G K ++ +NG +N Sbjct: 131 ITLRINPSFNVGNASIKMTGIPSQFGFDEECLNSDIIKLFKGNKNLKINGFHIYNGSNFN 190 Query: 171 SFLCFSAML----KNIEKEFGHFITQIEWISLGGGIH---------FTDKDYPVKDFCQR 217 + + I IE+I GGG K+ Sbjct: 191 NIDILVENYTNILETILNLKNKLSIDIEFIDFGGGFAAPFGKDLDLPDYKELKDSLEALL 250 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 K F + + I E G + L TV + E+ + H+ + Sbjct: 251 NKHFKDNHRPTIAFESGRYLTATCGCLIGTVQSVKESKGRKYCIVDFGINHLGGMSGLRR 310 Query: 278 SATIY-----------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 TI N T + G C D + ++ GD + +V Y Sbjct: 311 IPTIELNIFKLNISVEDNAKVETVTIVGPLCTPLDYLAKNVSVSKLQPGDVVFVPNVGAY 370 Query: 327 NINRK-NWFNGINMPTIAVKNV-----DGTIKAIR 355 + F +P + T+K +R Sbjct: 371 GLTASLIAFLSREIPKEIIIKNQSVICSHTLKIVR 405 >gi|289741541|gb|ADD19518.1| ornithine decarboxylase [Glossina morsitans morsitans] Length = 397 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 108/359 (30%), Gaps = 26/359 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D K+ T VK A+KC + TL G +S E+ Sbjct: 33 LFICDLTKIKEKYVTWQKYMPR--VKPYYAIKCNNDDLVIKTLADLGTGFDCASKNEIKQ 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + GE + K + + ++ +K + +R Sbjct: 91 ILDIGVQGERIIFANPCKLTSHIKYARSNQVLNGTVDNEFEMYKLHKYYPQSNLIIRFRC 150 Query: 125 SVSYSKFILADPNRPF-SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + L + + +S NV G+ FH K F + + + Sbjct: 151 EAEEVQCPLGEKFGCDAEQDASALMLLAKSLQLNVIGISFHVGSGCKDFPAYDRAINIAK 210 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236 K F + + +GGG + D K + + ++ + EPG Sbjct: 211 KLFKFGALLGYDMNLLDIGGGFPGS-SDENFKVIAAIVNKSLNRHFPDRKVNVIAEPGRF 269 Query: 237 IVTNTTTLNTTVLD------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 V TL + + + V S + D+ + + Sbjct: 270 FVAAAYTLICKIHAKREVRSPNNNKLLRKMYYLNDGVYGSFNCILYDHQHVTVEHFLDTD 329 Query: 285 T--GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + ++ G +C A D E + GD ++F ++ Y I + FNG P Sbjct: 330 SYLPSFKTLIWGPTCDALDKIIEDTELPDLCCGDLLAFPNMGAYTIPIASPFNGFMSPK 388 >gi|325981618|ref|YP_004294020.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosomonas sp. AL212] gi|325531137|gb|ADZ25858.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosomonas sp. AL212] Length = 411 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 46/375 (12%), Positives = 103/375 (27%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y D++K+ ++ V L A+K + L +DG +S E+ Sbjct: 38 TPFYAYDRKKITERVELLRQNLPQE-VLLHYAIKANPMPAVVQHLASLVDGMDVASAGEM 96 Query: 64 MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + E ++ K E+ + ++ + + ++ + L + Sbjct: 97 RVALDTTLTSEKISFAGPGKKVHELRSAIAAGVVLNIESPQEMELIAQQGVDLGMAPKVA 156 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSFLC 174 I + K + G + +++ N G + +N + Sbjct: 157 IRINPDFELKSSGVKMSGGSKPFGIDAECVPDVLKRLDLLDLNFVGFHIFSGSQNLNAAA 216 Query: 175 FSAMLKNIEK---EFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI- 229 + I + + ++ +++GGG + ++ +I Sbjct: 217 IQESHEKIVMLAIQLAKYAPSSVKLLNIGGGFGVPYFPGDQPLDIAAIGVNLQRLIKRIK 276 Query: 230 --------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272 LE G +V VL+ + + +V H Sbjct: 277 QQLPETTVALELGRYLVAEAGIYVCRVLERKASRGQVFLVTDGGLHHHLAASGNLGQVIR 336 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 T V G C D+ + + D + Y + Sbjct: 337 KNYPVVIGNKVQGTAREIVSVVGPLCTPLDVLADQMAMARASVNDLVVVLQSGAYGLTAS 396 Query: 332 NW-FNGINMPTIAVK 345 F P + Sbjct: 397 PTAFLDHPPPIEVLV 411 >gi|188581259|ref|YP_001924704.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001] gi|179344757|gb|ACB80169.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001] Length = 388 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 108/364 (29%), Gaps = 33/364 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N ++ A+K A + L + ++S+ E+ Sbjct: 21 PVMVLDLDVVRDNYTAFARAL--PDTRVFYAVKANPAPEVLRLLAEMGSCFDTASVAEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKF---KDKAQKLHKKI 118 + E ++ + + A+ + +++ K +A + Sbjct: 79 MALAAGATAERVSFGNTIKKERDIVRALKLGIRLFAVDCQAEVEKILSATTQAGVAAADV 138 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176 + + + + +N G+ FH + + + Sbjct: 139 QVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLNAYGVSFHVGSQQANTEAWD 198 Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSV 227 L + + F + ++LGGG + L + Sbjct: 199 GALASASQIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVESYGDAIFRALTKHFGNRIP 258 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278 + +EPG +V N + V+ +S+ + + + + + Y Sbjct: 259 ETIIEPGRGMVGNAGMIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDESIRYA-I 317 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334 T + +V G +C + D+ E + + IGD++ E Y F Sbjct: 318 KTDHDEDRMSPCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTTYAAVAF 377 Query: 335 NGIN 338 NG Sbjct: 378 NGFP 381 >gi|193706848|ref|XP_001946073.1| PREDICTED: ornithine decarboxylase-like isoform 1 [Acyrthosiphon pisum] gi|328700928|ref|XP_003241430.1| PREDICTED: ornithine decarboxylase-like isoform 2 [Acyrthosiphon pisum] Length = 459 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 116/362 (32%), Gaps = 25/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D L++ +K VK A+KC + +TL + +S E+ Sbjct: 35 PFYIFDVGDLVHKARIWQ--QKLPRVKPFYAVKCNDNSLVLETLAAFGTNFDCASKAEIK 92 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + A+ D F+ +L K K + I +R Sbjct: 93 KVLDLGVNPSRIIFANPAKMTSHIKYAMSQCVDLTTFDNELELYKIKSIHPSCNLVIRIR 152 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + + P + ++ G+ FH F + Sbjct: 153 CDATETQCPLGIKYGCDPLTEAP-ALMSLARDLGLSIVGVSFHVGSGCNEPAAFRRAIAA 211 Query: 182 IEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLE 232 F + +++GGG K + + + ++ I E Sbjct: 212 SAAIFRLAQQLGFMNMYLLNIGGGFPGN-KSTSLDKIADIVNDALNEWFPPNNGVTIIAE 270 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDS--------SVEAHVPDYLLYQESATIYPN 284 PG V + TL+T + I + + + S + + D+ + Sbjct: 271 PGRFFVASAFTLSTKIHSIKKRSNDENHIMYFINDGVYGSFNSILYDHSVVVPKPLNDYP 330 Query: 285 TGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 P + G +C D + +++GD I+F+D+ Y I + FNG +P + Sbjct: 331 MSPVCQSSIWGPTCDGLDQVVDLVNLPLMRMGDWITFDDMGAYTIPVASTFNGFPLPKVF 390 Query: 344 VK 345 Sbjct: 391 AV 392 >gi|237797832|ref|ZP_04586293.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020682|gb|EGI00739.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 324 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 95/294 (32%), Gaps = 19/294 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + E ++ ++ A+ + +L + +D A +L+ Sbjct: 86 LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQDVAAELNVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F L + + G + I LGGG+ +D +K E+ + Sbjct: 206 TLEPFIDALDRLLQLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265 Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE 277 + + EPG IV N L + V + IVD+++ + L Sbjct: 266 RDLGLLFEPGRFIVANAGVLLSRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAW 319 >gi|3360285|gb|AAC27893.1| ornithine decarboxylase [Haemonchus contortus] Length = 422 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 52/376 (13%), Positives = 109/376 (28%), Gaps = 39/376 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 ++ + + ++ A+KC + TL G +S E+ + Sbjct: 50 VVSTDSFVKR--------ELPMIEPFYAVKCNTDRVLVRTLAALGTGFDCASREEIDIVM 101 Query: 68 E-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E Y K A N + F++ +L K + + + ++ Sbjct: 102 DLGVSAERIVYANPCKTRSFITHAKERNVSMMTFDSAEELAKVAQLHPQAKMILRIAVSD 161 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + L P + + +V G+ FH + L + Sbjct: 162 PTARCPLNLKFGADPVKMAPQLLVHA-QELGVDVIGISFHVGSGCNDPTAYREALAHARH 220 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLEPGEA 236 + + LGGG T + +D ++ ++Y + EPG Sbjct: 221 LIELGRGLGLDMTLVDLGGGYPGTPQQTSFEDIAAVIRSAVDEYLPPEFGVRLIAEPGRF 280 Query: 237 IVTNTTTLNTT------------------VLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 TL V + V S + D++ + Sbjct: 281 FAAAPFTLVCNIIHATEVSAEKITKRPEDVEERGFMYYVNDGVYGSFNCILFDHVQPVGT 340 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 Y + + G +C + D + + + +G+ I + ++ Y + FNG Sbjct: 341 PLFDEIAQEYPSTIWGPTCDSLDKIEDQKLMRMMSVGEWIVYRNMGAYTCSASTTFNGFQ 400 Query: 339 MP-TIAVKNVDGTIKA 353 P I + N + Sbjct: 401 RPNAIYMINRKNWARI 416 >gi|116206602|ref|XP_001229110.1| hypothetical protein CHGG_02594 [Chaetomium globosum CBS 148.51] gi|88183191|gb|EAQ90659.1| hypothetical protein CHGG_02594 [Chaetomium globosum CBS 148.51] Length = 459 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 56/362 (15%), Positives = 102/362 (28%), Gaps = 34/362 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + V+ A+KC + + L+ G +S E+ Sbjct: 80 FFVADLGEVYR--QHLRWKLNLPRVRPFYAVKCNPDTRLLELLSALGTGFDCASKSEIEQ 137 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 Y K + F+ +L+K ++ LRI Sbjct: 138 VLNLGVDPSRIIYAQPCKTNSYVRYVAQKGVRQMTFDNADELHKIARLY--PDAELFLRI 195 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 S S L+ + NV G+ FH F +++ Sbjct: 196 LTDDSSSLCRLSLKFGASLDSTDSLLALASELGLNVVGVSFHVGSGASDPGAFLKAVRDA 255 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237 + F ++ + +GGG + + + F + + EPG Sbjct: 256 HEVFQQAASHGFSLQTLDVGGGFCSDNTFEQMAGVLRAALDEYFPAHLGINLIAEPGRYY 315 Query: 238 VTNTTTLNTTVLD-------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + TL V+ + N S + H S Sbjct: 316 ASTAFTLACNVIARRTIEDMSAASYMVYVNDGLYGNFSSIMFDHQHPIAKVLRSGGRTMY 375 Query: 285 TGP--------YTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWFN 335 P + G +C D E F + + +GD + FED+ Y FN Sbjct: 376 NTPAADATDDGIEYSIWGPTCDGIDRITESIRFPRLLDVGDWLYFEDMGAYTKCSATTFN 435 Query: 336 GI 337 G Sbjct: 436 GF 437 >gi|154308241|ref|XP_001553457.1| hypothetical protein BC1G_07866 [Botryotinia fuckeliana B05.10] gi|150852951|gb|EDN28143.1| hypothetical protein BC1G_07866 [Botryotinia fuckeliana B05.10] Length = 441 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 103/360 (28%), Gaps = 31/360 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++++D ++ + + VK A+KC + L + G +S E+ Sbjct: 64 FFVVDLGEVYR--QHMRWKKNLPRVKPFYAVKCNPDPQVIRLLAELGTGFDCASKGEIEQ 121 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K ++ + +K K ++ LRI+ Sbjct: 122 VLKMGIDPNYIIYAQPCKTSSYIRYAADQGIKQMTFDNGDELYKIKKLFPDAELFLRIST 181 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ +S N+ G+ FH L F +++ Sbjct: 182 DDSSSLSPLSLKFGAAMNATNDLLALAKSLGLNIVGVSFHVGSGASDPLAFRKAVQDAHS 241 Query: 185 EFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F + + +GGG + + L EF + + I EPG V+ Sbjct: 242 VFEQALTHGYHLHTLDIGGGFCTEIFELMTDTLSKALDEFMPSH-INIIGEPGRYYVSKA 300 Query: 242 TTLNTTVLDISENIKN---------------LVIVDSSVEAHVPDYLLYQESATIYPNTG 286 TL ++ V H + + Sbjct: 301 FTLACNIIARRTIKDPVSSDKSYMLYLNDGLYGNFSGIVFDHRNPVARVLRAGSFTCFDS 360 Query: 287 --------PYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C D F+ + +GD + FED+ Y FNG Sbjct: 361 LTNQETVDGIQYSIWGPTCDGIDRISANICFDHNLDVGDWLYFEDMGAYTKCCVTRFNGF 420 >gi|474032|emb|CAA47166.1| ornithine decarboxylase [Drosophila melanogaster] Length = 393 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 96/357 (26%), Gaps = 24/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D L L + ++ A+KC + L G +S E+ L Sbjct: 33 LNICDLSSLERKLRLWHKLMPR--IEPHYAVKCNDDPVVVKFLADLGTGFDCASKNELKL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + + + ++ +K + + +R Sbjct: 91 VLGFGVSPERIIFAHPCRPASHLRYAKEQQVVNGTVDNEYEIYKLRKHYPDSSLIVRFKS 150 Query: 125 S-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + ++ V G FH + ++ E Sbjct: 151 EAKKALCPLGDKYGCDAEADAAALMLLAKALGLKVTGTSFHVGSGCSEVEAYDRAIEKAE 210 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237 F ++E + +GGG D + + ++ ++I EPG Sbjct: 211 NIFKVGEMIGHKMELLDVGGGFPGIDDEMFKEIAQSVNTSVELRFPDKRIRIISEPGRFF 270 Query: 238 VTNTTTLNTTV---LDISENIKNLVIVDSSVEAHVPDYLL-YQESATIYPNT-------- 285 V TL V ++ L + + + Sbjct: 271 VEAAYTLICKVHAKREVRSKDGKLDTMMYYLNDGIFGAFAGMFYYPEEVAPELYLDEAES 330 Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 +++ G SC A D + GD + F ++ Y + + FNG ++P Sbjct: 331 LPKLKSVIWGPSCDALDKI-SDLLLPNLNPGDLLGFRNMGAYTMPIASPFNGFDVPE 386 >gi|163851469|ref|YP_001639512.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1] gi|163663074|gb|ABY30441.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1] Length = 388 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 48/371 (12%), Positives = 114/371 (30%), Gaps = 34/371 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N ++ A+K A + L + ++S+ E+ Sbjct: 21 PVMVLDLDVVRENYTAFARAL--PDTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119 + + ++ + + A+ + +++ K ++ G Sbjct: 79 MALAAGATADRVSFGNTIKKERDVVRALKLGIRLFAVDCQAEVEKIVRASEAAGIAAGEV 138 Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 RI + + + L+ + + N G+ FH + + + Sbjct: 139 QVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLNAYGVSFHVGSQQANTEAWD 198 Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSV 227 L + + F + ++LGGG + + L + Sbjct: 199 GALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTKHFGNRIP 258 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278 + +EPG +V N + V+ +S+ + + + + + Y Sbjct: 259 ETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDESIRYAIR 318 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334 + +V G +C + D+ E + + IGD++ E Y F Sbjct: 319 TDHDEDRMA-PCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTTYAAVAF 377 Query: 335 NGI-NMPTIAV 344 NG + I + Sbjct: 378 NGFPPLAQIVI 388 >gi|226313832|ref|YP_002773726.1| hypothetical protein BBR47_42450 [Brevibacillus brevis NBRC 100599] gi|226096780|dbj|BAH45222.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 423 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 120/391 (30%), Gaps = 34/391 (8%) Query: 6 YYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +Y++D +KL +N + V + + K + L+Q S E Sbjct: 18 FYVLDTEKLSDNYRRFQRAFTRRYEHVVVAYSYKTNYLPFLCQKLHQLGAHAEVVSRLEY 77 Query: 64 MLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---I 118 L + + +N + +I L I ++ S++ A + ++ I Sbjct: 78 ELARKLGVDPASIIFNGPLKTEDDIHFALEQGSLINLDSFSEIPWVVAYAMQYPEQTFRI 137 Query: 119 GLRINPS---------VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169 GLRIN + + L + + +V GL H + Sbjct: 138 GLRINVDLARGGVSPLQNGYEVSRFGFCVENGNLEKALSQLAVAPNVHVVGLHGHFSTNR 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-------YPVKDFCQRLKEFS 222 + H ++ +I +GGG +++ + + Sbjct: 198 SVGVYRQITRHLCRLGKQHLGERLAFIDIGGGFFGELPTSFGMTAAPTFEEYAEAITSVV 257 Query: 223 EK------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276 ++ ++ + LEPG ++V + V+D+ EN ++ +V + Sbjct: 258 KEELAELDHAPLLILEPGISLVADAVDFVCRVIDVKENKGERFVLVDGSIHNVKPTMHSH 317 Query: 277 ESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 T V G +C+ D + + IGD F V Y + Sbjct: 318 LLPARLVCNRKPVPEATYHVVGYTCMEKDYLLQGYTGPLPDIGDYFVFGHVGAYTLVFNP 377 Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 F P + + + + + + Sbjct: 378 PFI-RERPPVLAIDGNEAFIVRGKETLQQFI 407 >gi|195029057|ref|XP_001987391.1| GH21896 [Drosophila grimshawi] gi|193903391|gb|EDW02258.1| GH21896 [Drosophila grimshawi] Length = 392 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 103/357 (28%), Gaps = 25/357 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + VK A+KC + TL + G +S E+ Sbjct: 31 LNICDLSTVERMFQLWQQNMPR--VKPFYAVKCNDDPLILQTLAKLGAGFDCASKNEMKQ 88 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E + + + ++ +K + + +R Sbjct: 89 VLDLDVEPERIIFANPCRPISHLEYAKKNQVLKCAVDNEFEIYKLHKHFPNSNLIVRFKS 148 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + + + +S V G+ FH + ++ + Sbjct: 149 EAKKAQCPLGDKFGCDADIDASALMLLAKSLNLTVTGISFHVGSGCMESQAYERAIRKAK 208 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ----IYLEPGEA 236 F + + +GGG + D + + + + ++Y I EPG Sbjct: 209 NLFKFGELLGYDMNLLDIGGGFPGS-NDEQFEKIAESINKAVQRYFPDERIKIISEPGRF 267 Query: 237 IVTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 V TL + E V + D+ + ++ Sbjct: 268 FVAAAYTLVCKIHAKREVRDEAGKLDTVMYYLNDGVYGLFNCVLYDHQQVTAQHYLNDDS 327 Query: 286 GPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T + G SC A D E + GD + F ++ Y + + FNG + Sbjct: 328 SLPTFKSLIWGPSCDALDKISENVSLPNLNRGDILGFPNMGAYTVPIASAFNGFPLA 384 >gi|159478827|ref|XP_001697502.1| ornithine decarboxylase 1 [Chlamydomonas reinhardtii] gi|158274381|gb|EDP00164.1| ornithine decarboxylase 1 [Chlamydomonas reinhardtii] Length = 542 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 102/360 (28%), Gaps = 30/360 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64 +Y++D + V A+KC G+ LN G +S E+ M Sbjct: 155 FYVVDLANVQRMFKAWRAAMPR--VVPFYAVKCNPEPGILKLLNALGAGFDCASKGELDM 212 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + K + + K K LRI Sbjct: 213 MLRMGVSPNRIIFAHPCKRASDIRYAREHNVQYTTFDTVSELHKIAQMNPDFKCVLRIRA 272 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 ++ L + + V G+ FH ++ FS ++N K Sbjct: 273 DDPDARVPLGLKYGAEVSEADVLLRTAKELGLQVVGVSFHVGSACQNLSTFSGAIENARK 332 Query: 185 EFGHFI---TQIEWISLGGGIHFTDKDY--------PVKDFCQRLKEFSEKYSVQIYLEP 233 F +E + +GGG + F + V++ EP Sbjct: 333 VFDEAGALGFNMELLDIGGGFTGHFDEMGNVMFGEIANTINAALATNFPPEMGVRVIAEP 392 Query: 234 GEAIVTNTTTLNTTV----------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 G ++TL T V + ++ + S + D P Sbjct: 393 GRYFAETSSTLLTPVYGQRDRVAADGSVKKDYWLTDGLYGSFNCILYDGQNPGYKVVRSP 452 Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T + + G +C + D + ++ GD + + + Y + FNGI Sbjct: 453 LMADSTDSRTFLSTLWGPTCDSADCVYKDVTLPVLRNGDWLMWNNAGAYTVAGACDFNGI 512 >gi|296161875|ref|ZP_06844676.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia sp. Ch1-1] gi|295887894|gb|EFG67711.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia sp. Ch1-1] Length = 402 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 48/375 (12%), Positives = 102/375 (27%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP++ D+ + + + +G+ L ++K + L Q +DG +S E+ Sbjct: 29 TPFFAYDRMAIDIRVRELRSLLP-SGMHLHYSIKANPMPAVIHYLAQRVDGLDVASAQEM 87 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + + K E + + +QL +L + + Sbjct: 88 ALALDAGTAPDAIGFAGPGKSHEDLRRAVASGINVHVESETQLRLVTALGWELGVQPRVA 147 Query: 122 INPSVSYSKFILADPNRPFSR-LGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171 I + + + G +E+ + G + Sbjct: 148 IRVNPDFQVGNSGMRMGGGAAPFGMDVDQVPALLRELEAREVALAGFHVFWGSQCLHAAT 207 Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYS 226 I + + +++LGGG VK C+ ++++ Sbjct: 208 IIEAQRQSADLILRLASGLAQPLRFVNLGGGFGIPYFPGETPLDVKAVCEAMRDWLPPLC 267 Query: 227 VQ-----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-----LLYQ 276 + LE G +V V+D + ++ H + + Sbjct: 268 ERLPGTTPILELGRYLVGEAGIYVCRVVDRKVSRGRTFVITDGGLHHQLAASGNFGQVLR 327 Query: 277 ESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + + P V G C D + IGD + + Y + Sbjct: 328 RNFPVVIGNRPDGVPRERCHVVGCLCTPLDRLADDVELPEAHIGDFVVVKQSGAYGRSAS 387 Query: 332 N-WFNGINMPTIAVK 345 F P + Sbjct: 388 PVHFLSHPEPVEMLV 402 >gi|149378202|ref|ZP_01895918.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Marinobacter algicola DG893] gi|149357526|gb|EDM46032.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Marinobacter algicola DG893] Length = 391 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP +ID + D + A + A+K A + L +S+YE Sbjct: 29 DTPCVVIDTATINRQYDELVEGFPYAN--VYYAVKANPAPQVLTMLRDKGASFDIASVYE 86 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + G+ +Y K + ++ T S+ + ++ A+ Sbjct: 87 LDKVMGLGVTGDRISYGNTIKKAKDIRTFYERGVRLYATDSEAD-LRNIAKAAPGSKVYV 145 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + I + + G+ FH + + + A L Sbjct: 146 RILTEGTLTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGVSFHVGSQQREIGAWDAAL 205 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQI 229 ++ F +++ I++GGG + +K + + +K F ++ +I Sbjct: 206 GKVKVIFERLKEEDGIELKMINMGGGFPANYITRTNDLKTYAEEIKRFLDEDFGDDLPEI 265 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 +EPG ++++N L + V+ IS + + + + Sbjct: 266 IIEPGRSLISNAGVLVSEVVLISRKSRTALHRWVFTDVGKFGGLIETLDESIKFPIFTEK 325 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKN-WFNGIN 338 +G ++ G +C + DI E H + IGDR+ + Y FNG Sbjct: 326 SGEGEDCVIAGPTCDSADIMYEHHKYPLPLNLAIGDRMYWLSTGAYTTTYSAIEFNGFP 384 >gi|258590920|emb|CBE67215.1| putative Diaminopimelate decarboxylase [NC10 bacterium 'Dutch sediment'] Length = 435 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 59/395 (14%), Positives = 118/395 (29%), Gaps = 38/395 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP + ++ +N+ + + V++ ALK G+ L Q S Sbjct: 48 LGTPLLIYSSARVRDNIAAVAAAAEASPWPVRIHFALKACYLAGVVSLLQQAGLNVEVMS 107 Query: 60 LYEVMLGHE-KFGGE-THAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 YE +L F A + AV+ I ++S++ + Q+L + Sbjct: 108 EYEYVLARRIGFSPNQVIVNGPAKRPEFLERAVIDGVALINVESLSEMTFLQGLGQRLGR 167 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNC 167 I + I + S+ + P S+ G K S ++ + H Sbjct: 168 IIEVGIRINPLLSQRLRGPFTPPGSKFGFDVPSGEAAAAVKRIARSRSLSLQAVHCHGYT 227 Query: 168 ENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 A + + K +I + GGG Q+ Sbjct: 228 RQYRPDAHRAQVAAVVKFLRGVEADLGIRIPVLDFGGGFGSRYLMEAHGWTFQQFMREML 287 Query: 224 KY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 Q+ +EPG +V +T T+VL + ++ + +P + Sbjct: 288 DPLAGLPGDRQVIIEPGRYLVNDTAACLTSVLTCKRTVHRRWVLVDTGRHILPPRENAEY 347 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-------KIGDRISFEDVAGYNINR 330 + T G D P+ + GD ++ + Y + Sbjct: 348 VVMPCQASPGRTVYHVG------DFLCVPSEPVPLSVVGGVMRPGDLLAVFNAGAYTFSM 401 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 F G +P + + ++ S + + Sbjct: 402 AQNF-GEPIPNAILVDKGEWRWLFKKRSVEEQFMR 435 >gi|84385203|ref|ZP_00988235.1| putative diaminopimelate decarboxylase protein [Vibrio splendidus 12B01] gi|84379800|gb|EAP96651.1| putative diaminopimelate decarboxylase protein [Vibrio splendidus 12B01] Length = 400 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 114/354 (32%), Gaps = 34/354 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64 YL D L ++ ++ V+L A K + + TL Y+DG ++S E+ Sbjct: 28 AYLYDLDALEQHIKQMRHVLPK-NVELFYAAKANPSEPILRTLAPYVDGFEAASGGELTH 86 Query: 65 LGHEKFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121 L ++ A+ + D I ++++L + QKL++ I LR Sbjct: 87 LHQQQLDKPLIFGGPGKMLSELEQAIELDVDAIHVESLTELQRIGSLTQKLNRPASIFLR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLC 174 +N + + G + + + + G FH Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMYLRDFPLIKLKGFHFHLMSHQLDVDR 206 Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 A+++ + + I+LGGG+ + +P +FC +L+ K Sbjct: 207 HLALMQRYFQVVKEWKKTFSLDELIINLGGGMGINYQNPKQHFPWMEFCDKLEFLISKEH 266 Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 ++ E G I VLDI +N+ ++ H + Sbjct: 267 LQDWKLRFECGRYISAPCGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQGHDHPFAI 326 Query: 283 PNTGPY----------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 TA + G+ C D+ + IGD + F Y Sbjct: 327 LKNKQQPTISNPIDQTTATLVGQLCTPKDVLARNQNIDHIDIGDYVVFTLAGAY 380 >gi|294811317|ref|ZP_06769960.1| Decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|326439949|ref|ZP_08214683.1| pyridoxal-dependent decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294323916|gb|EFG05559.1| Decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 542 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 58/411 (14%), Positives = 111/411 (27%), Gaps = 57/411 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ D ++ L+ ++ +LK G+ L + +S E Sbjct: 17 GSPLYIYDLARVRAALEDLRAALPQP-SRIYYSLKANPHPGLVAELRRGGARAEVTSRGE 75 Query: 63 VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118 + E Y+ + +AV + T + L + A Sbjct: 76 LAAALEAGHPAAELMYSGPGKVRAELDEAVAAGMRTFSAESFGDLERIGAAAAAQGVTAD 135 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS- 171 + + S+ G + + + G+ F + Sbjct: 136 CVLRINAAGAPGQAGLRMTGGPSQFGFDLDGLTEQRARLLVQGTRIVGMHFFPLTNARDE 195 Query: 172 ---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224 + ++ + + + LGGG + + L ++ Sbjct: 196 AGLLAELAQSVRTAAQLREELGIPLHLLDLGGGFSAPYATPGERPVYRGLRTALSTVLDE 255 Query: 225 YSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------- 268 + E G +V ++ L TV D+ + + V S H Sbjct: 256 HLPGWRDGEPVVAFESGRYLVGDSGRLVVTVTDVKHSRGSDYAVLDSGINHLGGLSGLGR 315 Query: 269 ---------VPDYLLYQ--------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP 311 VP L Q + P T + G C DI Sbjct: 316 LLPLSAQPLVPPVLPDQGAGAAETDGKTDGETDGEPGTVTLAGPLCTPADILARAAELPG 375 Query: 312 VKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTI----KAIREF 357 V GD + F +V Y ++ F G P + + T+ A+R Sbjct: 376 VAAGDLLVFPNVGAYGLSASLLGFLGHPAPAEVLVDGGETVSATRLALRRQ 426 >gi|254393792|ref|ZP_05008907.1| decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|197707394|gb|EDY53206.1| decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 531 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 58/411 (14%), Positives = 111/411 (27%), Gaps = 57/411 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ D ++ L+ ++ +LK G+ L + +S E Sbjct: 6 GSPLYIYDLARVRAALEDLRAALPQP-SRIYYSLKANPHPGLVAELRRGGARAEVTSRGE 64 Query: 63 VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118 + E Y+ + +AV + T + L + A Sbjct: 65 LAAALEAGHPAAELMYSGPGKVRAELDEAVAAGMRTFSAESFGDLERIGAAAAAQGVTAD 124 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS- 171 + + S+ G + + + G+ F + Sbjct: 125 CVLRINAAGAPGQAGLRMTGGPSQFGFDLDGLTEQRARLLVQGTRIVGMHFFPLTNARDE 184 Query: 172 ---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224 + ++ + + + LGGG + + L ++ Sbjct: 185 AGLLAELAQSVRTAAQLREELGIPLHLLDLGGGFSAPYATPGERPVYRGLRTALSTVLDE 244 Query: 225 YSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------- 268 + E G +V ++ L TV D+ + + V S H Sbjct: 245 HLPGWRDGEPVVAFESGRYLVGDSGRLVVTVTDVKHSRGSDYAVLDSGINHLGGLSGLGR 304 Query: 269 ---------VPDYLLYQ--------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP 311 VP L Q + P T + G C DI Sbjct: 305 LLPLSAQPLVPPVLPDQGAGAAETDGKTDGETDGEPGTVTLAGPLCTPADILARAAELPG 364 Query: 312 VKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTI----KAIREF 357 V GD + F +V Y ++ F G P + + T+ A+R Sbjct: 365 VAAGDLLVFPNVGAYGLSASLLGFLGHPAPAEVLVDGGETVSATRLALRRQ 415 >gi|311696676|gb|ADP99549.1| ornithine decarboxylase [marine bacterium HP15] Length = 391 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 115/359 (32%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D + K+ A+K A + L +S+YE Sbjct: 29 ETPFVVIDTATIDRQYDELVEGFPY--AKVYYAVKANPAPQILTMLRDKGASFDIASVYE 86 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + GE +Y K + +F T S+ + ++ A+ Sbjct: 87 LDKVMALGVTGERISYGNTIKKAKDIRTFYEKGVRMFATDSEAD-LRNIAKAAPGSKVYV 145 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + I + + G+ FH + + + A L Sbjct: 146 RILTEGTLTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGVSFHVGSQQREIGAWDAAL 205 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F +++ I++GGG ++ + L E +I Sbjct: 206 NKVKVIFERLKEEDGIELKMINMGGGFPANYITRTNELKVYAEEIARFLHEDFGAELPEI 265 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 +EPG ++++N L + V+ IS + + + + Sbjct: 266 IIEPGRSLISNAGVLVSEVVLISRKSRTALHRWVFTDVGKFSGLIETLDEAIKFPIWTEK 325 Query: 285 TGP-YTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI E H + IGDR+ + Y FNG Sbjct: 326 VGEGEDCVIAGPTCDSADIMYEHHKYPLPLNLAIGDRMYWLSTGAYTTTYSAIEFNGFP 384 >gi|170694158|ref|ZP_02885313.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia graminis C4D1M] gi|170140898|gb|EDT09071.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia graminis C4D1M] Length = 402 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 43/375 (11%), Positives = 96/375 (25%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP++ ++ + + + GV L ++K + L +DG +S E+ Sbjct: 29 TPFFAYERAAIDTRIRELRSLLP-PGVHLHYSIKANPMPAVVHYLAARVDGFDVASAQEM 87 Query: 64 MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ +S+ + + +QL +L + G+ Sbjct: 88 AVALNAGAAPADIGFAGPGKSYDDLRRAISSGVNVHVESETQLRLVTALGWELGVQPGVA 147 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174 I + + G +++ + G + Sbjct: 148 IRINPDFEVGRSGMRMGGGAAPFGVDVDQVPALLRELQARQVALAGFHIFWGSQCLDAAT 207 Query: 175 FSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225 + + +++LGGG Q + E + Sbjct: 208 VIQAQRQSADLVARLARGLSEPPRFVNLGGGFGIPYFPGETPLNVQAVCEAMHDWLPRLC 267 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-----LLYQ 276 + LE G +V V+D + ++ H + + Sbjct: 268 ERVSGMTPILELGRYLVGEAGIYVCRVIDRKVSRGRTFVITDGGLHHHLAASGNFGQVLR 327 Query: 277 ESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + + P V G C D + IGD + Y + Sbjct: 328 RNFPVVIGNRPDGVPQQRCHVVGCLCTPLDRLADDIELPEAHIGDLVVVRQSGAYARSAS 387 Query: 332 N-WFNGINMPTIAVK 345 F P + Sbjct: 388 PLHFLSHPEPVEMLV 402 >gi|307133129|ref|YP_003885145.1| diaminopimelate decarboxylase [Dickeya dadantii 3937] gi|19571822|emb|CAD27340.1| lysA-like protein [Erwinia chrysanthemi] gi|306530658|gb|ADN00589.1| Diaminopimelate decarboxylase [Dickeya dadantii 3937] Length = 440 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 48/398 (12%), Positives = 103/398 (25%), Gaps = 35/398 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+Y+ + L L + G + +LK + L + G S Sbjct: 33 IGTPFYVYS-ARQLRRQLQQLRQQLPTGTAIYYSLKANPNLSVVRALAEQGAGCEVCSPA 91 Query: 62 EVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y K A+ I+ +V++L+ A + + Sbjct: 92 ELKTALAAGVSPQHILYVGPGKSLPALKLAIDCGIRAIVVESVTELDNLNRLAARANTVQ 151 Query: 119 GLRINPSVSYSK-FILADPNRPFSRLGEKCKDK---IESEIKN----VNGLMFHNNCENK 170 + + + +S + ++ G + S + + G + Sbjct: 152 TVALRINPDFSSAHARLVMSGKPTQFGMMRDTLHTVLASLHRWPSISLRGFHVYLGTRIL 211 Query: 171 S----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFS 222 + +L+ ++++ +GGG + + Sbjct: 212 NAQAIADNTRNILQLALDLRDTHRLTLDFVDVGGGFGVPYFPKETPLDLPALGAAIASIV 271 Query: 223 EKYSV-----QIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAH-------- 268 + QI +E G +V T V + K + D H Sbjct: 272 ADFRRRAADTQIIIELGRYLVAEAGLFVTRVNTLKTAGGKTFAVCDGGANCHSAAAGLNS 331 Query: 269 VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + V G C D+ G+ +++ D I Y + Sbjct: 332 MLRKNFPLLRLGDNQGRPLQPYQVSGPLCTPTDLLGDNVLLPTLEVDDLIGITHSGAYGL 391 Query: 329 NRKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 F P + + + + Sbjct: 392 TASPGSFLSFGYPVEVMVDGRRLTLIRQPETTEQLLAR 429 >gi|325295056|ref|YP_004281570.1| diaminopimelate decarboxylase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065504|gb|ADY73511.1| Diaminopimelate decarboxylase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 451 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 64/394 (16%), Positives = 119/394 (30%), Gaps = 32/394 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ ++KL + V+ + K + L+ + S Sbjct: 49 GSPLFVFSERKLRQKFREIKNAFTLRYPNVEFSWSYKTNYLDAICAILHSEGETAEVVSE 108 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 +E + G YN YK E V + I + ++ + A +L K+ Sbjct: 109 FEYEKARKLGVEGNQIIYNGPYKPIESLRVAAAEGARINIDHFEEIADLEQVADELGVKV 168 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKC---KDKIESEIKNVNGLMFHNNCENKSFLCF 175 I ++ G+ K +NGL H + Sbjct: 169 KAGIRLNMDTGIHPQWTRFGFNLENGQAWDAVKRIASGGKIELNGLHCHIGTFILEPKAY 228 Query: 176 SA----MLKNIEKEFGHFITQIEWISLGGGIHFTD----------------KDYPVKDFC 215 M++ K F ++E+I +GGG + ++ + Sbjct: 229 ENEVRKMVEFAYKIEDEFGFKVEYIDIGGGFPSKNRLRGIYLPPDVSVPSIDEFAERVCN 288 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL 274 L ++ +E G AIV L TTV V + + Sbjct: 289 TLLSSLRPGDYPKLIVESGRAIVDEAGFLITTVHAAKRMPDGKRAYVLDAGVNILFTAFW 348 Query: 275 YQESATIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 Y + I ++ G C+ D+ + + P+ G R+ V YN+ + Sbjct: 349 YHFNIEIDREVQGLTEPCILYGPLCMNIDVVDDLVYLPPLPRGTRLVISPVGAYNVTQWM 408 Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNN 365 F P + + +G I IRE +D Sbjct: 409 QFIRY-KPAVVLIGDNGEIDVIREAEDLSDITGR 441 >gi|332850067|ref|ZP_08432454.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Acinetobacter baumannii 6013150] gi|332871508|ref|ZP_08440002.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Acinetobacter baumannii 6013113] gi|193078056|gb|ABO12988.2| putative ornithine decarboxylase [Acinetobacter baumannii ATCC 17978] gi|332730916|gb|EGJ62222.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Acinetobacter baumannii 6013150] gi|332731362|gb|EGJ62654.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Acinetobacter baumannii 6013113] Length = 386 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 112/360 (31%), Gaps = 30/360 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+ ++D + + + ALK A + + L + +S+ E+ Sbjct: 24 TPFLVLDLSVIEKHYLELKQGF--PNADIYYALKANPANEVIERLCRIGSSFDLASVNEL 81 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGL 120 A+ K + ++ + LN A L Sbjct: 82 KKVQAFGVDASRLAFGNTIKKRADIQYFYEQGIRLYVTDSDADLNNIAQYAPGSKVFFRL 141 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAM 178 I+ + + ++++ + G+ FH + + + + Sbjct: 142 SID---GSETADWPLSGKFGCNAECVIRLAVKAKELGLIPYGISFHVGSQQRKIDLWDSA 198 Query: 179 LKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQ 228 L + F ++ ++LGGG+ L+ F Q Sbjct: 199 LAETKAIFDVLVNDHQIHLKMLNLGGGLPAQYVQQTEAFASYSKQINAALEMFKPYQLEQ 258 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYP 283 I LEPG ++V N L + ++ IS+ + + + + + Sbjct: 259 IILEPGRSLVGNAGILVSEIVLISQRPQSGTKRWVYTDVGVFNGLIETLGEAIQYPIVCK 318 Query: 284 NTGP-YTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 TG ++ G +C + DI ++ ++IGD + + Y + + FNG Sbjct: 319 KTGQSDDIILAGPTCDSMDIMYQNKKYELPLSLEIGDHLYWLSTGAYTTSYSSIEFNGFP 378 >gi|240138634|ref|YP_002963106.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens AM1] gi|240008603|gb|ACS39829.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens AM1] Length = 388 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 48/371 (12%), Positives = 115/371 (30%), Gaps = 34/371 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N ++ A+K A + L + ++S+ E+ Sbjct: 21 PVMVLDLDVVRDNYTAFARAL--PDTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119 + + ++ + + A+ + +++ K ++ G Sbjct: 79 MALAAGATADRVSFGNTIKKERDVVRALKLGIRLFAVDCQAEVEKIVRASEAAGIAAGEV 138 Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 RI + + + L+ + + N G+ FH + + + Sbjct: 139 QVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLNAYGVSFHVGSQQANTEAWD 198 Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSV 227 L + + F + ++LGGG + + L + Sbjct: 199 GALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTKHFGNRIP 258 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278 + +EPG +V N + V+ +S+ + + + + + Y Sbjct: 259 ETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDESIRYAIR 318 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334 + +V G +C + D+ E + + IGD++ E Y F Sbjct: 319 TDHDEDRMA-PCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTTYAAVAF 377 Query: 335 NGI-NMPTIAV 344 NG + I + Sbjct: 378 NGFPPLAQIVI 388 >gi|324507907|gb|ADY43343.1| Ornithine decarboxylase [Ascaris suum] Length = 415 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 56/378 (14%), Positives = 109/378 (28%), Gaps = 32/378 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++ KL+ ++ A+KC + L + G +S E + Sbjct: 23 FYVMSVNKLVTRFMEWKRYLPR--IEPFYAVKCNDDPVVLKVLTKLGCGLDVASKAEFVQ 80 Query: 66 GHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E Y K + F++V +LNK + + + Sbjct: 81 AVKLVSTEKIVYANPVKTKSFIKRAKELGISMMTFDSVDELNKVAVLHPEARMILRIAT- 139 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + G K V G+ FH + F + Sbjct: 140 DDTQARCPLSMKFGCEPITDGPKLLKVAAELGIRVVGISFHVGSDRNDPTAFYEPINQAR 199 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234 K F ++ + +GGG D P + K F +++I EPG Sbjct: 200 KLFNIGLQLGHKMTILDVGGGFPGIDNASPSFINIADIVSSYIDKCFPANENIRIIAEPG 259 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-----HVPDYLLYQESATIYPNTGPY- 288 T +L T V+ + + + ++ + + + + P Sbjct: 260 RFFATAPFSLVTNVIGVKRVPAERISKTGTTHHDGFMYYMNEGIYGSFNCIYFDFAKPQG 319 Query: 289 ------------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + G +C D + + + GD + ++D+ Y + + FNG Sbjct: 320 KPLFDKEDEECAPCSIWGPTCDGFDQVEKRRIMRRLSTGDWLYYDDMGAYTRSAASMFNG 379 Query: 337 INMPTIAVKNVDGTIKAI 354 T K I Sbjct: 380 FEKTRTYYFTDKNTWKLI 397 >gi|119945152|ref|YP_942832.1| ornithine decarboxylase [Psychromonas ingrahamii 37] gi|119863756|gb|ABM03233.1| ornithine decarboxylase [Psychromonas ingrahamii 37] Length = 392 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 127/365 (34%), Gaps = 31/365 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP+ +ID + ++ D ++ ALK A + D +N G +S Y Sbjct: 24 VETPFVIIDSATVEDHFDALRNNF--PWAEIYYALKANPAHEIIDIVNNKEGGFDLASTY 81 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + +Y K + +F T S + A K+ + Sbjct: 82 ELDRVISHGTDPDLISYGNTIKKRADIKYFYDAGIRMFVTDSDADLANIAAMAPGAKVYV 141 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAM 178 RI + + ++++ + G+ FH + + + Sbjct: 142 RILTE-GNLTADWPLSRKFGCQPDMAMDLLVKAQKLGLEPYGVSFHVGSQQRDIGAWDGA 200 Query: 179 LKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVK--DFCQRLKEFSEK----YSVQ 228 + ++ F +++ I++GGG + ++ F + + Sbjct: 201 IATVKVIFERLKSENNIELQMINMGGGFPAQYIHQTNTLAVYAAEIQRFLIEDFGATLPR 260 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPD-------YLLYQE 277 I LEPG ++V N L T V+ +S V D + + + + Y LY E Sbjct: 261 IILEPGRSLVANAGILVTEVVQVSRKSNTALHRWVYTDVGLFSGMIETLGEAIKYPLYCE 320 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-W 333 +++ ++ G +C + DI ++ +K GDR+ + Y + Sbjct: 321 TSSPGTGEESEEVVIAGPTCDSADILYEDYKYRLPHSLKEGDRLFWFSTGAYTTSYSAVE 380 Query: 334 FNGIN 338 FNG Sbjct: 381 FNGFP 385 >gi|218530277|ref|YP_002421093.1| ornithine decarboxylase [Methylobacterium chloromethanicum CM4] gi|218522580|gb|ACK83165.1| Ornithine decarboxylase [Methylobacterium chloromethanicum CM4] Length = 388 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 48/371 (12%), Positives = 115/371 (30%), Gaps = 34/371 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N ++ A+K A + L + ++S+ E+ Sbjct: 21 PVMVLDLDVVRDNYTAFARAL--PDTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119 + + ++ + + A+ + +++ K ++ G Sbjct: 79 MALAAGATADRVSFGNTIKKERDVVRALKLGIRLFAVDCQAEVEKIVRASEAAGIAAGDV 138 Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 RI + + + L+ + + N G+ FH + + + Sbjct: 139 QVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLNAYGVSFHVGSQQANTEAWD 198 Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSV 227 L + + F + ++LGGG + + L + Sbjct: 199 GALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTKHFGNRIP 258 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278 + +EPG +V N + V+ +S+ + + + + + Y Sbjct: 259 ETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDESIRYAIR 318 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334 + +V G +C + D+ E + + IGD++ E Y F Sbjct: 319 TDHDEDRMA-PCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTTYAAVAF 377 Query: 335 NGI-NMPTIAV 344 NG + I + Sbjct: 378 NGFPPLAQIVI 388 >gi|183178880|gb|ACC43928.1| ornithine decarboxylase [Malus hupehensis] Length = 425 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 105/362 (29%), Gaps = 27/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D L++ + V A+KC L +S E+ Sbjct: 56 PFYVLDLGVLVSLMQKWNRCL--PNVLPFFAVKCNPEPAFIAALATLGASFDCASKVEIE 113 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLR 121 Y K + F+++ +LNK K K + + Sbjct: 114 AILSHGVSPSRIVYANPCKGENHLRHAAGVGVNLATFDSMDELNKIKGCHPKCSLLLRIA 173 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + S + + + V G+ FH + + + Sbjct: 174 VPNDTSSWRSFGTKFGVLSEEVAPLLRHA-HKLGLRVVGVSFHVGSKASESQVYRGAIAA 232 Query: 182 IEKEF----GHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKYSVQ----IYLE 232 F + ++ + +GGG D + +KE + + + E Sbjct: 233 ARAAFDVADELKLPKVHVLDIGGGFKVNPLFDEIAETLNDAIKEHFGDHQSESDLVVMAE 292 Query: 233 PGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL----------LYQESAT 280 PG TL V+ + + I D + L Sbjct: 293 PGRFFAETPFTLVANVMGKRVRGEKREYWITDGIYGSFNLPAFDKSCLTVSPLLLHTPDH 352 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + Y++ V G +C + D + +K+ D + F ++ Y + FNG + Sbjct: 353 HHHSVAIYSSTVFGPTCDSLDTVVADYKLPELKLNDYLVFHNMGAYTSSAGTNFNGFCIS 412 Query: 341 TI 342 I Sbjct: 413 AI 414 >gi|196016998|ref|XP_002118347.1| hypothetical protein TRIADDRAFT_62377 [Trichoplax adhaerens] gi|190579063|gb|EDV19169.1| hypothetical protein TRIADDRAFT_62377 [Trichoplax adhaerens] Length = 391 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 62/364 (17%), Positives = 111/364 (30%), Gaps = 40/364 (10%) Query: 22 LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAYNVA 80 + + V++ A+KC + TL +SL E+ + Y Sbjct: 6 QWKMRLRNVEIFYAMKCNNDPVLLRTLINLGVSFDCASLGEIQSILNAGVNPDRIIYANT 65 Query: 81 YKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138 K A N + +F+ +L K K I + + V S+F L Sbjct: 66 IKAISHLRFAKEKNVNLTVFDNEDELYKIKKYHPNAKLAIRICPDMEVCESRFQLGIKFG 125 Query: 139 PFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEW 195 + +S NV G+ FH + + + + + ++ F F Sbjct: 126 AAKADVAHLLEVAQSLKLNVVGVSFHVGSDCLTPIAYEKGIITSKQIFKLAEKFGYHFNL 185 Query: 196 ISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL 249 + +GGG + K F + V+I EPG T TL V+ Sbjct: 186 LDIGGGFTAFSALETTFAKAAAVISKALQKYFPPELGVRIIAEPGRYFATRACTLVLNVI 245 Query: 250 D--ISENIKNLVIVDSSVEAHVP--------------------------DYLLYQESATI 281 + + AH+ D+ L Sbjct: 246 GRRVVRKGNGDLFDFEHENAHLYKNTNDFEKVLYYVNDSVYGCLNILPIDHALITLKPVK 305 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 G TA++ G++C + D + + GD + FE+ Y+++ + FN P Sbjct: 306 SNTHGEETAVLFGQTCDSLDCLMKECLLPKLNAGDWVYFEETGAYSLSLASKFNSFKKPK 365 Query: 342 IAVK 345 Sbjct: 366 CYYY 369 >gi|326387492|ref|ZP_08209101.1| ornithine/diaminopimelate/arginine decarboxylase,family 2 [Novosphingobium nitrogenifigens DSM 19370] gi|326208148|gb|EGD58956.1| ornithine/diaminopimelate/arginine decarboxylase,family 2 [Novosphingobium nitrogenifigens DSM 19370] Length = 423 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 50/382 (13%), Positives = 104/382 (27%), Gaps = 34/382 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D ++ + + + + A+K + + ++DG +S E Sbjct: 38 GTPLFVYDAGRIAGRVAALRAAMP-SELGIHYAVKANPFAPLLAFMAGHVDGFDIASGGE 96 Query: 63 VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + L G + +D E+ + T+ + +L++ + +L L Sbjct: 97 LALLTSVGISGARIGFAGPGKRDGEMVEAVKAGVTLHLESPRELDRAIEVGARLGIAPRL 156 Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIKNV------NGLMFHNNCENKSFL 173 I + G + + V G + ++ Sbjct: 157 AIRVNPDFELAGAGMRMGGGARPFGIDADQVPDLVRRIVASGAEWRGFHVYAGSQSLDSE 216 Query: 174 CFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---- 225 +A + + + + +LGGG R+ + Sbjct: 217 AIAAAQAATIDCVARLADAAGVAVPVCNLGGGFGIPYFHGQHPLDIDRIGAELAERLASL 276 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 + LE G +V T +LD + +V H Sbjct: 277 PASLAQTRFVLELGRWLVGEAGVYLTEILDRKISRGETFLVVDGGLHHQLAASGNFGSII 336 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 AT + A V G C D G+ + GD ++ Y + Sbjct: 337 RRNYPCAVATRFAAPAEEVAHVVGCLCTPLDRLGDALALPHAEPGDLVALFCAGAYGASA 396 Query: 331 K-NWFNGINMPTIAVKNVDGTI 351 + F G + + I Sbjct: 397 SPSEFLGHGPARQVLVGHEDEI 418 >gi|320582680|gb|EFW96897.1| Ornithine decarboxylase [Pichia angusta DL-1] Length = 433 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 102/367 (27%), Gaps = 38/367 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D +L + + V+ L A+KC + TL Q G +S E+ Sbjct: 58 PFFVCDLGELKRLVRLWR--AEMPRVEPLYAVKCNNDEKLLHTLLQMGLGFDCASKTEIQ 115 Query: 65 LGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 Y K A + + ++V ++ K A + +R Sbjct: 116 QMLSLGADPAKIIYANPCKAVPHVRYARQNGVNLTTVDSVDEVRKI--AAHHPDCGLLIR 173 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I+ + + L+ + + N+ G+ FH K+F +++ Sbjct: 174 IHTDDADATCPLSIKFGASLQEARILVQECAKLKLNLKGVAFHVGSGCKNFNTIETAVRD 233 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGE 235 F ++ + +GGG F L I+ E G Sbjct: 234 SRMVFDYAESLGYTLKMLDIGGGFSKATFHASAAVFRSALDTHFAAEEFPDLYIFSELGR 293 Query: 236 AIVTNTTTLNTTVLDI--------------------SENIKNLVIVDSSVEAHVPDYLLY 275 + + TL V + + + +H Sbjct: 294 FLAASCFTLAVNVTSKRSDAFQERIYVNDGVYGNLNCILFDHQEVEPKVLTSHGRFVFHS 353 Query: 276 QESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINR 330 + V G +C D + V GD + F+D Y Sbjct: 354 NYNHPEKELAAAANPFKQYSVWGPTCDGLDCISPNCKLSQEVVAGDWLYFKDTGAYTSAA 413 Query: 331 KNWFNGI 337 FNG Sbjct: 414 ATNFNGF 420 >gi|85714753|ref|ZP_01045740.1| probable diaminopimelate decarboxylase protein [Nitrobacter sp. Nb-311A] gi|85698638|gb|EAQ36508.1| probable diaminopimelate decarboxylase protein [Nitrobacter sp. Nb-311A] Length = 392 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 52/375 (13%), Positives = 98/375 (26%), Gaps = 35/375 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 YL D L DT A KL A+K + + L DG +SL E+ Sbjct: 19 AYLYDLAHLRRRADTLRRCLP-AQCKLFYAIKANSDAPILRALLHRTDGFEVASLGEIQA 77 Query: 66 GHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + K I + QL + A++ +++ + + Sbjct: 78 VRGINDAVPVVFGGPGKTDAELEGALDQGVLLIHVESEHQLRRLDWIARRRNQRADILLR 137 Query: 124 PSV-SYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCF 175 + S + ++ G + + + GL H+ N Sbjct: 138 VNPASVPQQATLRMGGQATQFGIEEAQIPALIELALGLPGVRLRGLHIHSISNNLDAQTH 197 Query: 176 ----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYSV 227 + + +W++ GGGI + + + FC L Sbjct: 198 LALLEHYFDLTSTWQRRYQLEFDWLNAGGGIGINYANPQASFDWEGFCAGLAALIAARQP 257 Query: 228 QI--YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 + E G + + V D+ + H + Sbjct: 258 RFQLVFECGRFLTADCGYYLADVTDLKHTHGKHFAILRGGSHHFRLPASWQHNHPFVVLP 317 Query: 285 TGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + +CG C D + ++ GD I+F Y + + Sbjct: 318 REAWPYPFSRPAVHETPVTLCGELCTPKDTLACDVRVERLRAGDCIAFLLAGAYGWHISH 377 Query: 333 W-FNGINMPTIAVKN 346 F P + Sbjct: 378 HDFLSHPHPERVYLD 392 >gi|258424237|ref|ZP_05687118.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A9635] gi|257845503|gb|EEV69536.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A9635] Length = 400 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D +L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLDELKSHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGVSEDEVDDVIEAALAMSNIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEMG 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|254453489|ref|ZP_05066926.1| lysine/ornithine decarboxylase, putative [Octadecabacter antarcticus 238] gi|198267895|gb|EDY92165.1| lysine/ornithine decarboxylase, putative [Octadecabacter antarcticus 238] Length = 404 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 113/362 (31%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D ++ G + A+K A + + L + ++S E+ Sbjct: 46 PTLVMDVNRVEQQYYALKAGLG--GADIHYAVKANPAPEIIERLVKLGSHFDAASRGEIE 103 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKIGLRI 122 L ++ K A + + + + + AQ ++ +R+ Sbjct: 104 LVLGAGASPSDVSFGNTIKRASDIAYAHAAG-VTLFSADAIEEIEKIAQHAPGAQVYIRL 162 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 S + + L+ + D+ + + GL FH + + + L + Sbjct: 163 IVESSEADWPLSRKFGCDRDMAIDLLDRARALGLDPVGLSFHVGSQTRKASMWGPTLDEM 222 Query: 183 ---EKEFGHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYSV---QIYLEPG 234 + +++GGG D+ + + ++ EPG Sbjct: 223 VKIWDAAKEAGHALSLLNIGGGFPAFYGQDIEAPTDYAASVMDQVRSRFGEVARVMAEPG 282 Query: 235 EAIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPDY--LLYQESATIYPNTGPY 288 +V + V+ +S V + + + + + T + P Sbjct: 283 RGLVAEAGAIVAEVMLVSRKSSRDLHRWVYLSIGRFSGLAETEGEAIRYQITTLRDDDPV 342 Query: 289 -TAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343 ++ G SC + D+ E +K GDRI + Y + + FNG + Sbjct: 343 GPCVLAGPSCDSADVLYEKQPVLLPMTLKSGDRIVIRNCGAYTSSYSSVGFNGFPPLDVL 402 Query: 344 VK 345 V Sbjct: 403 VI 404 >gi|89899511|ref|YP_521982.1| Orn/DAP/Arg decarboxylase 2 [Rhodoferax ferrireducens T118] gi|89344248|gb|ABD68451.1| Orn/DAP/Arg decarboxylase 2 [Rhodoferax ferrireducens T118] Length = 414 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 44/376 (11%), Positives = 101/376 (26%), Gaps = 34/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+Y D+ L + + VKL A+K + + +DG +S E Sbjct: 40 QTPFYAYDRLLLRARVAALRGVLPRT-VKLHYAMKANPMPAVVGLMVGLVDGIDVASAGE 98 Query: 63 VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + ++ +D E+ +++ I + ++ + +L + Sbjct: 99 LKVALDAGANPLEISFAGPGKRDAELRQAVASRVLINLESFREVAALEAICGELGLSARV 158 Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKS-- 171 + + K + G + E + G +N Sbjct: 159 AVRVNPDFELKGSGMKMGGGPKQFGVDVEQIPELLGCIGRAGLSFEGFHLFAGSQNLRSE 218 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + H + +++LGGG + + + + + Sbjct: 219 SICEAQQKSYELALRLAQHAPAPVRFLNLGGGFGIPYFPGEQRLDLAPIGDNLAQLVQRA 278 Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 + +E G +V ++D + + +V H Sbjct: 279 QTELPDAALVIELGRYLVGEAGVYVARIVDRKVSRGQVYLVADGGLHHHLSASGNFGQVI 338 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + T V G C D+ E ++ D + Y + Sbjct: 339 RKNYPVTIGNKADSRETETVSVVGPLCTPLDLLAERMALPVAQVDDLVVVFQSGAYGASA 398 Query: 331 KNW-FNGINMPTIAVK 345 F G + Sbjct: 399 SPQGFLGHPACLEVLV 414 >gi|1352223|sp|P14019|DCOR_CRIGR RecName: Full=Ornithine decarboxylase; Short=ODC gi|49440|emb|CAA34784.1| unnamed protein product [Cricetus cricetus] Length = 455 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 66/377 (17%), Positives = 119/377 (31%), Gaps = 46/377 (12%) Query: 6 YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 +Y+ D L +L + V A+KC + + +TL +S E+ Sbjct: 39 FYVADLGDVLKKHLRWLKAL----PVTPFYAVKCNDSRALVNTLAA--ITVDCASKTEIQ 92 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L E Y K A + + F++ +L K +A K+ LR Sbjct: 93 LVQGLGVPPERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVA-RAHPKVTKLVLR 151 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I S + L+ R ++ + +V G+ FH F L + Sbjct: 152 IATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQALSD 211 Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 F + + +GGG ++ + K F V++ E Sbjct: 212 ARCVFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPPDSGVRVIAE 271 Query: 233 PGEAIVTNTTTLNTTVL----------------------DISENIKNLVIVDSSVEAHVP 270 PG V + TL ++ +++ + AHV Sbjct: 272 PGRYYVASAFTLAVNIIAKKIVSKGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 331 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L + Y++ + G +C D E + +GD + FE++ Y + Sbjct: 332 PLLPKRPKPD----EKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAA 387 Query: 331 KNWFNGINMPTIAVKNV 347 + FNG P+I Sbjct: 388 ASTFNGFQRPSIYYVMS 404 >gi|70983858|ref|XP_747455.1| ornithine decarboxylase [Aspergillus fumigatus Af293] gi|66845081|gb|EAL85417.1| ornithine decarboxylase, putative [Aspergillus fumigatus Af293] Length = 433 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 107/363 (29%), Gaps = 36/363 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D +++ V A+KC + L G +S+ E+ Sbjct: 44 PFFVADLGQVIRQHRRWR--VNLPDVLPFYAVKCNPDPNLLRLLANLGTGFDCASIEELR 101 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + K + + + + ++ LR+ Sbjct: 102 TVLSLGVDPCRIIFANPCKSVSSLVFAARTGVTRTTFDNLDELDNIRTFLPNAELVLRLY 161 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S + L + + +V G+ FH + + +++ + Sbjct: 162 ASDSDALINLGEKFGATVEASLPLLQRARELGLDVCGVSFHVGTGASNASAYVTAIRDAK 221 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL--EPGEAIV 238 FG+ + + +GGG + ++D L+ ++ + L EPG V Sbjct: 222 IVFGYGKSLGFDMNLLDIGGGFQDS----NLEDIACVLRPILKEEFPGVRLLAEPGRYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSV-----------------EAHVPD------YLLY 275 + TL VL + + + V + + Sbjct: 278 RSAYTLACKVLSRRRHSGTDHHDRPDMLYQNDGVYGNFMNVLIEKETVRPSLVAYTWPFH 337 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINRKNWF 334 + + G +C + D + ++IGD + ++++ Y I F Sbjct: 338 SRGNNTRRKLEEHRYTIWGPTCDSMDCVAKDVPMTSEIRIGDWLKYKNMGAYTIATATQF 397 Query: 335 NGI 337 NG Sbjct: 398 NGF 400 >gi|229106622|ref|ZP_04236863.1| Decarboxylase [Bacillus cereus Rock3-28] gi|228676804|gb|EEL31409.1| Decarboxylase [Bacillus cereus Rock3-28] Length = 411 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 57/395 (14%), Positives = 110/395 (27%), Gaps = 43/395 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ + +L + + + + + +LK + L SS+ E Sbjct: 12 GSPLYVYNLAELTKSYQKLINSLPDKSI-IYYSLKANPNPEITRHLINLGCYAEISSIGE 70 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + E Y K + N + ++L D + K I Sbjct: 71 LDTVLDVGGSPEHCLYTGPGKTKKEIQYALSKNVSHFSVESFNELEIINDLTKNHSKLIN 130 Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEK--------CKDKIESEIKNVNGLMFHNNCENK 170 + + + S++ S+ G K ++ +NG +N Sbjct: 131 ITLRINPSFNVGNASIKMTGIPSQFGFDEECLNSDIIKLFKGNKNLKINGFHIYNGSNFN 190 Query: 171 SFLCFSAML----KNIEKEFGHFITQIEWISLGGGIH---------FTDKDYPVKDFCQR 217 + + I IE++ GGG K+ Sbjct: 191 NIDILVENYTNILETILNLKNKLSIDIEFVDFGGGFAAPFGKDLDLPDYKELKDSLEALL 250 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 K F + + I E G + L TV + E+ + H+ + Sbjct: 251 NKHFKDNHRPTIAFESGRYLTATCGCLIGTVQSVKESKGRKYCIVDFGINHLGGMSGLRR 310 Query: 278 SATIY-----------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 TI N T + G C D + ++ GD + +V Y Sbjct: 311 IPTIELNILKLNISVEDNAKVETVTIVGPLCTPLDYLAKNVSVSKLQPGDVVFVPNVGAY 370 Query: 327 NINRK-NWFNGINMPTIAVKNV-----DGTIKAIR 355 + F +P + T+K +R Sbjct: 371 GLTASLIAFLSREIPKEIIIKNQSVICSHTLKIVR 405 >gi|255730323|ref|XP_002550086.1| ornithine decarboxylase [Candida tropicalis MYA-3404] gi|240132043|gb|EER31601.1| ornithine decarboxylase [Candida tropicalis MYA-3404] Length = 462 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 62/367 (16%), Positives = 121/367 (32%), Gaps = 37/367 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC + + TL +S E+ L Sbjct: 84 FFICDLGEIKKSVEIWNKSL--PSVQPHYAVKCNSNLKVLQTLYSLGVNFDCASKQEIDL 141 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K ++ D + + +K KI +R+ Sbjct: 142 ILSMAIQPDKIIYANPCKTNSFIRHANSQDVNLTTVDNVHELYKISKFHPGCKILIRLIT 201 Query: 125 SVSYSKFILADPNRPFSRLGE-KCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S ++ L+ + + + NV+G+ FH K F +K+ + Sbjct: 202 DDSTAQCQLSTKFGCDLSIAINEILPIAKELGLNVHGVAFHVGSGAKDFTSIYQAIKDSK 261 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLEPGE 235 F + + +GGG + K L+++ + ++ EPG Sbjct: 262 TLFEKMFEFGFTPQLLDIGGGFERGTFNESSKMVNFALEKYFPLEYTTNHGIKFIAEPGR 321 Query: 236 AIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDY------------- 272 +V N TL T V+ D+ + V ++ + D+ Sbjct: 322 FMVANAFTLITHVIARRDLAENENDVKAMLYINDGVYGNLNCILFDHQNPKVYVLTNKNQ 381 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINR 330 QE N + V G +C D F +++GD + FE+V Y Sbjct: 382 LYYKQELLEKSQNQKGFNYSVWGPTCDGLDCVSSFVQLSKNIEVGDWLFFENVGAYTSCA 441 Query: 331 KNWFNGI 337 FNG+ Sbjct: 442 STRFNGL 448 >gi|159123567|gb|EDP48686.1| ornithine decarboxylase, putative [Aspergillus fumigatus A1163] Length = 433 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 107/363 (29%), Gaps = 36/363 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D +++ V A+KC + L G +S+ E+ Sbjct: 44 PFFVADLGQVIRQHRRWR--VNLPDVLPFYAVKCNPDPNLLRLLANLGTGFDCASIEELR 101 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + K + + + + ++ LR+ Sbjct: 102 TVLSLGVDPCRIIFANPCKSVSSLVFAARTGVTRTTFDNLDELDNIRTFLPNAELVLRLY 161 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S + L + + +V G+ FH + + +++ + Sbjct: 162 ASDSDALINLGEKFGATVEASLPLLQRARELGLDVCGVSFHVGTGASNASAYVTAIRDAK 221 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL--EPGEAIV 238 FG+ + + +GGG + ++D L+ ++ + L EPG V Sbjct: 222 IVFGYGKSLGFDMNLLDIGGGFQDS----NLEDIACVLRPILKEEFPGVRLLAEPGRYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSV-----------------EAHVPD------YLLY 275 + TL VL + + + V + + Sbjct: 278 RSAYTLACKVLSRRRHSGTDHHDRPDMLYQNDGVYGNFMNVLIEKETVRPSLVAYTWPFH 337 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINRKNWF 334 + + G +C + D + ++IGD + ++++ Y I F Sbjct: 338 SRGNDTRRKLEEHRYTIWGPTCDSMDCVAKDVPMTSEIRIGDWLKYKNMGAYTIATATQF 397 Query: 335 NGI 337 NG Sbjct: 398 NGF 400 >gi|288941528|ref|YP_003443768.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Allochromatium vinosum DSM 180] gi|288896900|gb|ADC62736.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Allochromatium vinosum DSM 180] Length = 410 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 45/376 (11%), Positives = 104/376 (27%), Gaps = 35/376 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y D+ + + + + L A+K + L +DG +S E+ Sbjct: 36 TPFYAYDRALISARVAQLRQALPD-DIHLHYAIKANPMPAVVQHLAGLVDGFDVASGGEL 94 Query: 64 MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ A E+ ++ I + +L + L + + Sbjct: 95 KTALDTSMPPHQISFAGPAKTPGELRQAIAAGIVINLESERELRAAVQAGEALGIRPRVA 154 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFLCFS 176 + + K + + G + E + ++ + FH ++ + Sbjct: 155 VRVNPDFELKSAGMKMSGGPKQFGIDAERVPAVLAEMKCLDLEFIGFHIFSGAQNLRAEA 214 Query: 177 AMLKNIEKEFGHFITQIEWI------SLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225 + ++ +LGGG + E + Sbjct: 215 ISEAQEKTLELAMRLALDVPSPVRALNLGGGFGIPYFPGEPPLDLVAVGERLSELLPAAR 274 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VP 270 ++ +E G V V++ + + +V H + Sbjct: 275 RALPDTELIIELGRFFVGEAGVYVCRVVERKVSRGQVFLVTDGGLHHHLAASGNFGQVIR 334 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + + + P TA V G C D+ + + GD ++ Y + Sbjct: 335 KNYPVLVANRVESDGDPETASVVGPLCTPLDLLADRMPLGHAREGDLVAVMQSGAYGLTA 394 Query: 331 KNW-FNGINMPTIAVK 345 F G + Sbjct: 395 SPTAFLGHPTAVEVLV 410 >gi|262052059|ref|ZP_06024269.1| hypothetical protein SA930_0163 [Staphylococcus aureus 930918-3] gi|259160037|gb|EEW45071.1| hypothetical protein SA930_0163 [Staphylococcus aureus 930918-3] Length = 400 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQIYYAMKANSERKILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPKIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKAWSEKHRFPLKHINLGGGIGVNYADLTNQFEWDNFVERFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|163794512|ref|ZP_02188483.1| Orn/DAP/Arg decarboxylase 2 [alpha proteobacterium BAL199] gi|159180236|gb|EDP64759.1| Orn/DAP/Arg decarboxylase 2 [alpha proteobacterium BAL199] Length = 417 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 98/358 (27%), Gaps = 29/358 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +D + N + + A+K + D L +S E+ Sbjct: 58 PLLAVDLSVVEWNYRSL--AFALPETAIYYAVKANPEPELVDLLAALGSRFDVASRGEIE 115 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + ++ K A + +++ K A + Sbjct: 116 LCLSRGISADRLSFGNTIKKERDIAFAHAEGVRMFAVDCEAEVEKVARAAPGADVFCRIL 175 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + L+ E + G+ FH + + L Sbjct: 176 TSGTGAEW--PLSRKFGCTLAKAETVLRRAADLGLTPRGVSFHVGSQQIDLSQWDIALAE 233 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232 F ++ I+LGGG ++ L ++ E Sbjct: 234 TAHLFERMEDQGITLDLINLGGGFPARYREDVAGAEAYGRAIYAALDRHFAGRAINTIAE 293 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284 PG +V + + V+ +S + S + + + + Y+ + Sbjct: 294 PGRGLVGDAGVIRAEVVLVSRKDDSEDTRWVYLDIGKFSGLAETMDEAIKYRVTTDH-DG 352 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 ++ G SC + DI E + + +GD + Y + FNG Sbjct: 353 GPDGPVILAGPSCDSADILYEKAGYRLPLDLAVGDTVLILATGAYTSTYSSIGFNGFP 410 >gi|119773550|ref|YP_926290.1| ornithine decarboxylase [Shewanella amazonensis SB2B] gi|119766050|gb|ABL98620.1| ornithine decarboxylase [Shewanella amazonensis SB2B] Length = 391 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 119/358 (33%), Gaps = 26/358 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+ +ID + D + A + A+K A + L +S+YE+ Sbjct: 30 TPFVVIDTNIIAKQYDDMVTNFPFAN--VYYAVKANPAKEILTLLKDKGSNFDIASIYEL 87 Query: 64 MLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + ++ + ++ + L ++A + + Sbjct: 88 DMVMAVGVTADRVSFGNTIKKRKDVRAFYERGVRLFASDSEADLRMIAEEAPGSKVYVRI 147 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 S + + L+ + + + + + G+ FH + + + A + Sbjct: 148 LTEGSQTA-DWPLSRKFGCQNEMAYELLALAKELGLDPYGISFHVGSQQRDIGAWDAAIG 206 Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK--DFCQRLKEFSEKYS----VQIY 230 ++ F ++ I++GGG D + + Q++K F ++ +I Sbjct: 207 KVKVLFDRLREDHGIVLKMINMGGGFPANYIDKTNQLGVYAQQIKHFLKEDFGDELPEII 266 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285 LEPG ++++N L + V+ IS + + + Sbjct: 267 LEPGRSLISNAGVLISEVVLISRKSHTALERWVYTDVGKFSGLIETMDEAIKYPIFTEKK 326 Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 G ++ G +C + DI E + + IGDR+ + Y FNG Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYAYGLPADLAIGDRLYWLTAGAYTTTYSAVCFNGFP 384 >gi|225445352|ref|XP_002281621.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 412 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 111/362 (30%), Gaps = 29/362 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++ +D V A+KC + L +S E+ Sbjct: 45 PFYILDLGAVVRLMDMWKQAL--PNVVPYYAVKCNCQPPLITALASLGANFDCASRAEIE 102 Query: 65 LGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 G + Y + A + F+++ +++K +K + ++ Sbjct: 103 TVMALGVGAQQIVYANPCKGESHLKYAASVGVNLTTFDSMQEIDKIIMWHKKCDLLLRIK 162 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 S L + V G+ FH + + + + Sbjct: 163 APNDEKGSWRSLGSKFGALREEVVPLLQHANAAGLRVIGVSFHVGSKVNDPQVYRGAIAS 222 Query: 182 IEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--------QI 229 F + + + +GGG + + +KE Y +I Sbjct: 223 ARGVFDAAAQLKLPPMHVLDIGGGF---QESPTFHEIAAVIKEAINDYFPSSETSEDLKI 279 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI-------- 281 EPG TL + ++ + + Y +S+ + Sbjct: 280 MAEPGRFFAETAFTLVSNIIGKRVRGEKREYWIDDGIYGSFNLPAYDKSSMMVKPLLGGS 339 Query: 282 -YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + N +++ V G +C + D+ + + D + F ++ Y + FNG ++ Sbjct: 340 EWMNKAKFSSTVFGPTCDSMDMVVAESQLPELHMNDVLVFYNMGAYTASAGTRFNGFDIS 399 Query: 341 TI 342 +I Sbjct: 400 SI 401 >gi|23014264|ref|ZP_00054090.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 460 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 54/393 (13%), Positives = 120/393 (30%), Gaps = 34/393 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLL--LALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ +++L N+ + ++ + K + L+Q S Sbjct: 52 GSPLFIASERRLRENVRRVRGAFERHYRPVVHGWSYKTNYTSAICRILHQEGSWAEVVSA 111 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 +E G +N K I + + + +L + A++ + + Sbjct: 112 FEYEKARSLGVPGNRIIFNGPNKPRAILERAIAEGARLHVDHLDELELIERIAREKGEVV 171 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIESEIKNVNGLMFHNNCENKSFLCF 175 + + + + G+ S + GL H + Sbjct: 172 PVTLRLNFNTGYTDPWSRFGFNLESGQAHSAASRIKRSAHLRLTGLHSHIGTFILETRAY 231 Query: 176 SAMLKNIEKEFGHFITQ----IEWISLGGGIH-----------FTDKDYPVKDFCQRLKE 220 + ++ + I+ I +GGG+ V+++ + Sbjct: 232 AEQVRLMCNFMKTVEADGECVIDAIDIGGGLPSRNALQGIYLPPEQAVPAVEEYGAAVCS 291 Query: 221 FSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDY 272 E+ +++E G A+V + +L +TV+ + + Sbjct: 292 ALEECLADRVGPHPTLFIESGRAVVDDAVSLASTVVGTKRLPDGRAAAVLDAGINSMLTA 351 Query: 273 LLYQESATIYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 L Y + +A + G C+ D+ P+ +GD + F V YN + Sbjct: 352 LWYHHPVKLTKPKAGDSADTVLYGPMCMNIDVMRHTVQLPPLSVGDCLVFNPVGAYNNTQ 411 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDY 362 F P + + + DG IRE + D Sbjct: 412 WLQFIEY-RPAVVLIHSDGEHSVIREAETIEDM 443 >gi|126323015|ref|XP_001364917.1| PREDICTED: similar to ornithine decarboxylase [Monodelphis domestica] Length = 461 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 113/386 (29%), Gaps = 33/386 (8%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 + D +L + + A+KC + TL G S E+ L Sbjct: 42 VADLGDILK--KHLRWYKALPQATPFYAVKCNDNRAILKTLAAVGAGFDWVSKTEMQLVQ 99 Query: 68 E-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126 E Y K N + S++ K K+ LR+ Sbjct: 100 NLGVPPEMTIYANPCKQVSQIKYAVNSGVQMMTFDSEVELMKVARAHPKAKLVLRMATDD 159 Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 S + L+ + ++ + +V G+ FH F + + F Sbjct: 160 SKAVCRLSVKFGVTLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVFDARCVF 219 Query: 187 ---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGEAI 237 F + + +GGG ++ + + K F VQI EP Sbjct: 220 DMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEISTVINPALDKYFPPDSGVQIIAEPCRYY 279 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---------------QESATIY 282 V + TL ++ +K D EA+ ++ Y Sbjct: 280 VASAFTLAVNIIAKKVVLKEQTGSDDEDEANDQTFMYYVNDGVYGSFNCILFDHAHVKPL 339 Query: 283 PNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 P + G +C D + + +GD + FE++ Y + + FNG Sbjct: 340 LQKRPKPDEKYYSSSTWGPTCDGLDRIVKCCDLPEMHVGDWMLFENMGAYTVAAASTFNG 399 Query: 337 INMPTIAVKNVDGTIKAIREFSYNDY 362 TI + +++ D+ Sbjct: 400 FQRSTIYYVISGPAWQCMQQIKNQDF 425 >gi|326503090|dbj|BAJ99170.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 408 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 103/352 (29%), Gaps = 19/352 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +++ +Y+ D ++++ GV+ A+KC + L G +S Sbjct: 47 VRSAFYVFDLARVVDLYRGWRRAL--PGVRSCYAVKCNPEPALLGALAALGAGFDCASRR 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + Y K + + T + + + Sbjct: 105 EMEAVLALGVQPGSIVYANPCKPEAHLEYAAEVG-VNLATYDSEEEVVKVKRCHPGCELI 163 Query: 121 RIN--PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 P ++ L + E NV G+ FH + + Sbjct: 164 LRIKGPDGGEARVDLGTKYGAHEDEVLPLLRAAQREGLNVAGVSFHVGSGASNTDVYRGA 223 Query: 179 LKNIEKEFGHF----ITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 ++ F + + + +GGG + + F E V++ E Sbjct: 224 IEAARGVFDTAAALGMPPMRVLDIGGGFMAGPAFDEAAAVINAALERYFGELPCVEVIGE 283 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP 287 PG T+ V+ + ++ D+ + + P G Sbjct: 284 PGRYFAETAFTMAARVIGKRTRGEVREYWIDDGLYGTLSCIPMDHYVPRPRPLAAPRAGE 343 Query: 288 YTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T V G +C + D + + +GD + F+D+ Y + FNG Sbjct: 344 KTYTSTVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTASGSNFNGF 395 >gi|242050042|ref|XP_002462765.1| hypothetical protein SORBIDRAFT_02g031570 [Sorghum bicolor] gi|241926142|gb|EER99286.1| hypothetical protein SORBIDRAFT_02g031570 [Sorghum bicolor] Length = 413 Score = 146 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 95/348 (27%), Gaps = 19/348 (5%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D K+++ + A+KC + L G +S E+ Sbjct: 56 FYVLDLAKVVDLFRAWRRAL--PDARPCYAVKCNPDPALLGALAALGAGFDCASRAEIEA 113 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K + + T + + L Sbjct: 114 VLALGVQPRDIVYANPCKPEAHLEYAAEVG-VNLTTYDSEEEVAKVRRCHPACELLLRLK 172 Query: 125 SVSYSKFILADPNRPFSRLGE--KCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + E + V G+ FH +S ++ Sbjct: 173 GPDGGGVRVDLGTKYGAHADEVVPLLRAAQRAGVGVAGVSFHVGSGASILAVYSGAIQAA 232 Query: 183 EKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEA 236 F + + + +GGG + F + V++ EPG Sbjct: 233 RAAFDAAAALGMPPMRVLDIGGGFVSGPTFDDAAAVINDALAQHFGDLPCVEVIGEPGRY 292 Query: 237 IVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTAM 291 TL V+ + S+ + D+ + P G T Sbjct: 293 FAETAFTLAARVIGKRTRGEVREYWIDDGLYGSLNCVIMDHYVPTPRPLASPRPGDKTYT 352 Query: 292 --VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 V G +C + D + + +GD + F+D+ Y + FNG Sbjct: 353 STVFGPTCDSFDTVVTGYQLPEMSVGDWLVFDDMGAYTTGAGSNFNGY 400 >gi|41386599|dbj|BAD08372.1| decarboxylase [Streptomyces halstedii] Length = 414 Score = 146 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 61/391 (15%), Positives = 111/391 (28%), Gaps = 45/391 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG----TTSS 58 TP Y+ D ++ + V++ ALK + L +G S Sbjct: 12 GTPLYVYDLDRVAEARHDLRTSLPDE-VEIYYALKANPHPQVAGALRS-GEGRECRAEIS 69 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QK 113 S+ E+ F Y K +A+ T +++ L A Sbjct: 70 SVGELAAALTAGFRASEILYTGPGKTDGELDEAIGKGVKTFCVESLTDLQHVGAVALRHG 129 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFS------RLGEKCKDKIESEIKNVNGLMFHNNC 167 + LRIN + + + + P L + + + GL F Sbjct: 130 VVADCLLRINSATASATTSIRMTGTPSQFGIDSETLVDAMPELRAVPGTRITGLHFFPLS 189 Query: 168 ENKS----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------DYPVKDFC 215 + F + +E++ +GGG + Sbjct: 190 NARDEASLIGEFRHTIAYAAGLAEETGLTLEFLDIGGGFAHPYGAPGERPVYRELRTELA 249 Query: 216 QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI----------KNLVIVD 262 L E + +I +E G + TL T V++I + N Sbjct: 250 AALDEHFPHWREGAPRIAVETGRYQTSGAGTLLTRVVNIKVSRGRKFVVIDAGINTFGGM 309 Query: 263 SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 S + +P + + + + A + G C GDI G + GD ++ + Sbjct: 310 SGLGRLLPVAVEPEYTGSAEATELTDVASLAGPLCTPGDILGREIRLPELAPGDLVTIPN 369 Query: 323 VAGYNINRKN--WFNGINMPTIAVKNVDGTI 351 Y + F G P V + Sbjct: 370 AGAYG-VTASLLMFLGRPAPVEVVLKGGKVV 399 >gi|254561232|ref|YP_003068327.1| ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens DM4] gi|254268510|emb|CAX24467.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens DM4] Length = 388 Score = 146 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 47/371 (12%), Positives = 115/371 (30%), Gaps = 34/371 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N ++ A+K A + L + ++S+ E+ Sbjct: 21 PVMVLDLDVVRDNYTAFARAL--PDTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119 + + ++ + + A+ + +++ K ++ G Sbjct: 79 MALAAGATADRVSFGNTIKKERDIVRALKLGIRLFAVDCQAEVEKIVRASEAAGIAAGEV 138 Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 RI + + + L+ + + + G+ FH + + + Sbjct: 139 QVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLHAYGVSFHVGSQQANTEAWD 198 Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSV 227 L + + F + ++LGGG + + L + Sbjct: 199 GALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTKHFGNRIP 258 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278 + +EPG +V N + V+ +S+ + + + + + Y Sbjct: 259 ETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDESIRYAIR 318 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334 + +V G +C + D+ E + + IGD++ E Y F Sbjct: 319 TDHDEDRMA-PCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTTYAAVAF 377 Query: 335 NGI-NMPTIAV 344 NG + I + Sbjct: 378 NGFPPLAQIVI 388 >gi|54025755|ref|YP_119997.1| putative ornithine decarboxylase [Nocardia farcinica IFM 10152] gi|54017263|dbj|BAD58633.1| putative ornithine decarboxylase [Nocardia farcinica IFM 10152] Length = 371 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 110/363 (30%), Gaps = 29/363 (7%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYI---RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 M ++PY +I +++ +N R G ++ A+K + L+ Sbjct: 1 MPESPYLVIHPERVRDNYRALAAAVSGRGLRGTRIRYAVKASPVPELIRLLDTEGAEFDV 60 Query: 58 SSLYEVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 +S+ E+ L Y A F+T L + + A Sbjct: 61 ASIGEIDLCRAQGVAPHKLCYGNTVKKAADIARAHAVGVRRFAFDTEDDLLRIAEHAPGA 120 Query: 115 HKKIGLRINPSVS--YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 + + S + +RL + +D V G FH + Sbjct: 121 QVECRFLASAPQSRTPFGTKFGCAPQEAARLLVRARDL----GLEVAGPYFHVGSQQLDP 176 Query: 173 LCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + ++ +I + +++GGG+ D Sbjct: 177 DAWRIGIEQAGHIANALSDKEIPVTSVNIGGGLPIAYADAAPALDRIAAVIEEAAARHLP 236 Query: 230 -----YLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY-LLYQESATI 281 +EPG A+V N T++ V+ + + V +D + + Y + Sbjct: 237 PTATLVVEPGRALVGNAGTIHAEVVAVRIAPDGRRWVYLDIGRYNGMAETENEYIAYRFV 296 Query: 282 YPNTGP--YTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335 G A+V G +C D+ ++ GDR+ D Y + + FN Sbjct: 297 TERDGDPVDEAVVAGPTCDGDDVLYQRTRVLLPTTLRAGDRVQILDTGAYTASYSSVSFN 356 Query: 336 GIN 338 G Sbjct: 357 GFP 359 >gi|195121526|ref|XP_002005271.1| GI20395 [Drosophila mojavensis] gi|193910339|gb|EDW09206.1| GI20395 [Drosophila mojavensis] Length = 392 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 111/357 (31%), Gaps = 23/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + + + + A+KC + TL G +S E+ Sbjct: 31 LNICDLSTVERKFELWQK--QLPRITPFYAVKCNDDKRIVQTLADLGVGFDCASKNELKQ 88 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + + + + ++ +K + + +R Sbjct: 89 VLDYGVSPDRIIFANPCRPISHLDYAKQQKVLKGTVDNEFEIYKLHKHYPNSNLIVRFKS 148 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L D + + + +S V G FH + ++ + Sbjct: 149 EAKAAQCPLGDKFGCDADIDASALMLLAKSLDLTVTGTSFHVGSGCSDMEAYERAIRKAK 208 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEKYSVQIYLEPGEAI 237 F ++ + +GGG +D ++ +K ++++ +QI EPG Sbjct: 209 NLFKFGQLLGYDLDLLDIGGGFPGSDDEHFIKLAGTVNSAVQKYFPDERIQIIAEPGRFF 268 Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT- 285 V + TL + E V S + D+ + + Sbjct: 269 VAASYTLVCKIHAKREVRNSAGKLDTVMYYLNDGVYGSFNCILYDHQTVTVEHYLPADPL 328 Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + +++ G SC A D E +K GD + F ++ Y + + FNG +P Sbjct: 329 LPTFKSLIWGPSCDALDKISEDLRLPYLKRGDLLGFPNMGAYTVPIASAFNGFPLPK 385 >gi|146343068|ref|YP_001208116.1| putative ornithine decarboxylase [Bradyrhizobium sp. ORS278] gi|146195874|emb|CAL79901.1| putative ornithine decarboxylase [Bradyrhizobium sp. ORS278] Length = 380 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 111/357 (31%), Gaps = 27/357 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N ++ A+K A + L ++++ E+ Sbjct: 21 PCLVVDLDIVRDNYMNFARAL--PDSRVFYAVKANPAPEVLSLLASLGSSFDTATVAEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + +Y + A + +++ K A + Sbjct: 79 MALAAGATPDRISYGNTIKKERDIARAYALGIRLFAVDCAAEVEKISRAAPGAKVFCRIL 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + + D + G+ FH + + + L Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVEVLDLAKRLGLEPCGISFHVGSQQRKVKAWDRALAM 196 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232 F + +++GGG + + L++ + +E Sbjct: 197 ASTVFRDCAERGINLSMVNMGGGFPTKYLKDVPPVVQYGRSIFRALRKHFGNQIPETIIE 256 Query: 233 PGEAIVTNTTTLNTTVLDISENI-----KNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 PG +V N + + V+ IS+ + + + A P+ G Sbjct: 257 PGRGMVGNAGIIESEVVLISKKSDEDELRWVYLDIGKFGGLAETMDESIRYAIRTPHEGA 316 Query: 288 YT--AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 T ++ G +C + D+ E + + IGD++ E Y + FNGI Sbjct: 317 ETTPCVLAGPTCDSADVMYEKLPYPLPVTLSIGDKVLIEGTGAYTSTYSSVAFNGIP 373 >gi|307213748|gb|EFN89086.1| Ornithine decarboxylase [Harpegnathos saltator] Length = 409 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 53/374 (14%), Positives = 128/374 (34%), Gaps = 24/374 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ +I K V A+KC + + L +S+ E+ Sbjct: 33 FYVADIGGVIK--KHMEWINKIPRVTPYYAIKCNSDPTVIKVLAAMNVCFDCASMQEIRQ 90 Query: 66 GHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + GE + A + + + ++L+K ++ + + +R Sbjct: 91 VMQHGVKGERIIFAHPAKLPSHIKYARKVGVERMTVDGETELSKIQEFFPEAKVVLRIRC 150 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S P+ + + N++G FH + + +K Sbjct: 151 DAKNSPVSLGTKFGCEPYEE-AVHLIQRTKDLGLNLHGFSFHVGTPCREVDAYRRGIKTC 209 Query: 183 EKEFGHFI----TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGEA 236 + +E I +GGG + F + + + ++ +I EPG Sbjct: 210 ARLIDVAKTIGCRDVELIDIGGGFSGDCGAE-IDRFAKVINDATQDLDPAVRIISEPGRY 268 Query: 237 IVTNTTTLNTT------VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----G 286 V+ TL + V + E + + + + + L Q Sbjct: 269 YVSANFTLASYLHSKRIVSENGELKRMYYMNCGVYNSFLDELLGLQSRRPRLLFEPINDE 328 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA-VK 345 +++++ G + + D+ + + +GD + ++D+ Y ++ N FNG +P + Sbjct: 329 EFSSILWGPTADSYDLIVKDVPLPELYVGDWLVWKDMGAYTLSLSNTFNGFPIPAVMPFV 388 Query: 346 NVDGTIKAIREFSY 359 + +++ S+ Sbjct: 389 RKSQWLVSVKMESF 402 >gi|21229287|ref|NP_635209.1| ornithine decarboxylase [Methanosarcina mazei Go1] gi|20907866|gb|AAM32881.1| Ornithine decarboxylase [Methanosarcina mazei Go1] Length = 390 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 125/360 (34%), Gaps = 30/360 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ ++D QK+ + D + K+ A+K + L + +++YE Sbjct: 30 ETPFLIVDLQKIERSYDELVEHM--PFAKIHYAVKANPLDKVVLALKRKGSNFDVATIYE 87 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L E +Y K + A + ++ S L K +A Sbjct: 88 LDQLIRLGVEPERISYGNTIKKEKDIAYAYDNGVRLFVTDSESDLKKLARRAPGSRVFFR 147 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + P K +++E + GL FH + + + Sbjct: 148 ILTESDGADWPLSRKFGSHPDLIY----KLILKAEKLGLEPYGLSFHVGSQQRDIGQWDN 203 Query: 178 MLKNIEKEF---GHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYS----VQ 228 + + F ++ I+LGGG + + ++ + ++ F + + Sbjct: 204 AIAKCKYLFEAVAEKGIHLKMINLGGGFPAKYQSQAHDLETYAHEIRRFLHEDFGEELPE 263 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYLLYQESATIYP 283 I +EPG ++V + + + V+ I++ + ++ + + Sbjct: 264 ILIEPGRSLVADAGIIVSEVIMIAKKARFNQYKWVYLDIGKFGGLIETLDECIKYPIFCD 323 Query: 284 NTG-PYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI ++ F ++ G+R+ Y + + FNG Sbjct: 324 KKGCAEEVILAGPTCDSMDILYEHHKYSFPHTMRDGNRVYIFTTGAYTQSYSSICFNGFP 383 >gi|93006103|ref|YP_580540.1| Orn/DAP/Arg decarboxylase 2 [Psychrobacter cryohalolentis K5] gi|92393781|gb|ABE75056.1| Orn/DAP/Arg decarboxylase 2 [Psychrobacter cryohalolentis K5] Length = 421 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 61/389 (15%), Positives = 111/389 (28%), Gaps = 47/389 (12%) Query: 3 KTPY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P Y+ D + L + T + +L A+K A + TL +++DG ++S Sbjct: 34 PSPLCAYIYDLEALEERITTMKRCLPD-NTQLFYAIKANAEPKILSTLAEHVDGFEAASA 92 Query: 61 YEVMLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116 E+ + K A+ DTI ++ +L + + A +L Sbjct: 93 GELNWLQTHQPNHPIIFGGPGKLTSDLQQAIHQQIDTIHVESLVELTRIQILSQALQLPV 152 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169 +I LR+N + + G ++ G FH Sbjct: 153 RIFLRMNIDIGDIGSSKLVMGGKPTPFGLDETHLKQALAIIDSSPFIEFCGFHFHLMSHQ 212 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIE------WISLGGGIHFTDKDYPVKDFCQRLKEFS- 222 S +++ + + I++GGGI P + + Sbjct: 213 LSVERHLLLMQRYMEMVKKWQHDYPSLPSNLTINVGGGIGIHYDQQPQHFEWEVFCQQLA 272 Query: 223 ----EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277 + E G I VLDI +N+ ++ H Sbjct: 273 SILTANLQFTVRFEIGRFITAPCGYYVMEVLDIKKNLGETFVIGHGGTHHFRTPAAQQHN 332 Query: 278 SATIYPNTGPYTAM--------------------VCGRSCLAGDIFGEFHFEKPVKIGDR 317 AM + G+ C DI + + + IGD Sbjct: 333 HPFFIVPRRMSHAMENKLQANLIEQAAITGTKATLVGQLCTPKDILAKDQWIDALHIGDY 392 Query: 318 ISFEDVAGYNINRKN-WFNGINMPTIAVK 345 + F Y N + F P + Sbjct: 393 LVFTLAGAYAWNISHQNFLMHQPPKMIFL 421 >gi|77359149|ref|YP_338724.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis TAC125] gi|76874060|emb|CAI85281.1| diaminopimelate decarboxylase, PLP-binding [Pseudoalteromonas haloplanktis TAC125] Length = 401 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 47/372 (12%), Positives = 109/372 (29%), Gaps = 28/372 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P+++ D L ++L + VKL A+K + L+ +S Sbjct: 19 LDSPFFVYDLDTLNSHLAQLV---AQTEVKLWYAVKANPLSKIIQCLDNAGFNFDVASKG 75 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ + K + T + +++Q+ ++A Q Sbjct: 76 ELEQVLAQGVSSDRVLNTGPAKSPKQIKHFIERGVRTFVAESINQVRWLNEQAKLQNCQL 135 Query: 117 KIGLRINPSVSYSK---------FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 ++ LR+ + + L D + + ++ + Sbjct: 136 QVLLRVQLRWPEGEKNPLGGDSLTPFGLGCTEWQALNITDYDALSFDGLHIFQWG-NMLS 194 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-----QRLKEFS 222 K +S M+ + + ++ + LGGG+ + K Sbjct: 195 TQKLSELWSQMIAPLSQLARDLNINLKILDLGGGLGIPYTQNDITLNWDDLITALAKIKK 254 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI 281 + ++++E G V V++ +N ++ + + + Q+ Sbjct: 255 QAGVEELWMELGRYAVGECGHYAAPVVERKQNYGQQQVILSGGINHLLRPAVTSQDFPAA 314 Query: 282 Y---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 +T + G C A D GE + D + F Y + F Sbjct: 315 LLRDSHTPTQAMSLYGPLCTALDSLGEHALPSDLNEHDWLVFSQCGAYGFSESMPYFLCH 374 Query: 338 NMPTIAVKNVDG 349 + V + Sbjct: 375 ELAGEYVLEQNK 386 >gi|254227376|ref|ZP_04920808.1| Diaminopimelate decarboxylase [Vibrio sp. Ex25] gi|262396359|ref|YP_003288212.1| vibrioferrin decarboxylase protein PvsE [Vibrio sp. Ex25] gi|151939988|gb|EDN58814.1| Diaminopimelate decarboxylase [Vibrio sp. Ex25] gi|262339953|gb|ACY53747.1| vibrioferrin decarboxylase protein PvsE [Vibrio sp. Ex25] Length = 400 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-VM 64 Y+ D L ++ ++ V+L A K + + TL Y+DG ++S E Sbjct: 28 AYVYDLNALEEHIKQLRHVLPR-NVELFYAAKANPSGPILKTLAPYVDGFEAASGGELAH 86 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121 L ++ E+ + D I ++++L + ++L++ I LR Sbjct: 87 LHQQQLDKPLIFGGPGKMPSELQQAIELDVDAIHVESLTELQRIGALTERLNRPASIFLR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174 +N + + G + + + ++ G FH Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKGFHFHLMSHQLDVER 206 Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 A+++ + + + E I+LGGG+ + +P +FC +L+ K Sbjct: 207 HLALMQRYFQVVKAWQQEFELGELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266 Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 + E G I VLDI +N+ ++ H + + Sbjct: 267 VQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQSHDHPFVI 326 Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + A G+ C D+ V IGD + F Y Sbjct: 327 LKSEQHHEISHPIQHAQATFAGQLCTPKDVLARNQHVAHVDIGDYVVFTLAGAY 380 >gi|73669670|ref|YP_305685.1| ornithine decarboxylase [Methanosarcina barkeri str. Fusaro] gi|72396832|gb|AAZ71105.1| ornithine decarboxylase [Methanosarcina barkeri str. Fusaro] Length = 390 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 56/367 (15%), Positives = 123/367 (33%), Gaps = 30/367 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +D QK+ + D + K+ A+K + L +++YE Sbjct: 30 ETPFLTVDLQKIEQSYDELVEHM--PFAKIHYAVKANPMDEVVLALKSKGSNFDVATVYE 87 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L E +Y K + + ++ S L K KA Sbjct: 88 LDQLLRLGVEPERISYGNTIKKEKDIEYAYEKGVRLYVTDSDSDLKKLARKAPGSRVFFR 147 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + P K +++E + GL FH + + + Sbjct: 148 ILTESDGADWPLSKKFGSHPDLIY----KLILKAEKLGLEPYGLSFHVGSQQRDIGQWDN 203 Query: 178 MLKNIEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQ 228 + + F ++ I+LGGG + + ++ + ++ F + + Sbjct: 204 AISKCKYLFEAAAEKGIHLKMINLGGGFPAKYQAQAHDLETYAGEIRRFLHEDFGEELPE 263 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYLLYQESATIYP 283 I +EPG ++V N + + V+ IS+ + ++ + + Sbjct: 264 IIIEPGRSLVANAGIIVSEVVMISKKARFNQYKWVYLDIGKFGGLIETLDECIKYPIFCD 323 Query: 284 NTG-PYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 G ++ G +C + DI ++ F ++ G+R+ Y + + FNG Sbjct: 324 KKGCAEEVILAGPTCDSMDILYEHHKYTFPHTMREGNRVYIFTAGAYTQSYSSVCFNGFP 383 Query: 339 MPTIAVK 345 + Sbjct: 384 PLKAYLI 390 >gi|310816188|ref|YP_003964152.1| decarboxylase, pyridoxal-dependent [Ketogulonicigenium vulgare Y25] gi|308754923|gb|ADO42852.1| decarboxylase, pyridoxal-dependent [Ketogulonicigenium vulgare Y25] Length = 395 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 112/361 (31%), Gaps = 22/361 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D ++ +A + A+K + + L +S E+ Sbjct: 37 PTLVLDIDRVEEQYRALKAGLGHAD--IHYAVKANPHRDVLERLVHLGSHFDCASRGEIE 94 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + ET +Y K A ++ +F ++ K ++ +R+ Sbjct: 95 MCLALGARPETISYGNTIKRARDIAFAASVGVTLFAVDAEEELVKIAENAPGAQVYVRLI 154 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S + + L+ + D+ G FH + + + L Sbjct: 155 VEASQADWPLSRKFGCDGEMALNLLDRAVELGLEPLGFSFHVGSQTRRADFWIPALDAFA 214 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK--YSVQIYLEPGE 235 + + +++GGG + P + ++ + + + ++ EPG Sbjct: 215 GIWDEARARGHNLSLLNIGGGFPAFYGEEIQGPTRYAASVMELVTARFGHVERVMAEPGR 274 Query: 236 AIVTNTTTLNTTVLDI----SENIKNLVIVDSSVEAHVPDYLLYQ-ESATIYPNTGPY-- 288 +V + V+ ++ V + + + + + P+ G Sbjct: 275 GMVAEAGMIVAEVVLTSRKSERDMHRWVYLSIGRFSGLAETEGEAIRYQFVTPHDGEAMG 334 Query: 289 TAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAV 344 +V G SC + D+ E +K GD++ + Y + FNG + Sbjct: 335 PCIVAGPSCDSADVLYEKRPMNLPLALKSGDKVLIRNTGAYTSTYSSVCFNGFPPLDVVA 394 Query: 345 K 345 Sbjct: 395 I 395 >gi|193215600|ref|YP_001996799.1| Orn/DAP/Arg decarboxylase 2 [Chloroherpeton thalassium ATCC 35110] gi|193089077|gb|ACF14352.1| Orn/DAP/Arg decarboxylase 2 [Chloroherpeton thalassium ATCC 35110] Length = 452 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 119/390 (30%), Gaps = 33/390 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--LKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++I ++ + AL K K+ A K + +Q S Sbjct: 47 GSPLFVISERTIREVYQEALSAFKTRYPKVQFAWSYKTNYLNAVCKVYHQEGSWAEVVSG 106 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 +E G +N + ++ + + I + +L + A +L + Sbjct: 107 FEFEKALANGVPGGKIIFNGPDKTEADLRKAIEHGALIHIDHFDELYEIMRLAPELGQTA 166 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK---DKIESEIKNVNGLMFHNNCENKSFLCF 175 + + ++ + D GE + + + GL H + + Sbjct: 167 KVAVRINMDTGIYPRWDRFGFNYENGEAWAAINKIMPAPNLELVGLHTHIGTYIMTPNAY 226 Query: 176 SAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------ 225 + + + + I+++ LGGG + + Y Sbjct: 227 AIATEKLAALVVRIERKYKHPIKYLDLGGGFASKNTLKGAYLPGSDTCPSFDDYAEAVTE 286 Query: 226 -----------SVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDY 272 ++LE G A++ L TVL + + +++D V + Sbjct: 287 TLINSDIQYEQMPALFLETGRALIDEAGYLLGTVLANKRLADGRRSLVIDIGVNNLFTSF 346 Query: 273 LLYQES-ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + G C+ D+ E ++ GD + + V YN+ + Sbjct: 347 WYNHHIVPARMNQRDTEDTTIYGPLCMNIDVIREAVMFPVLEKGDPVVIKRVGAYNMTQW 406 Query: 332 NWFNGINMPTIAVKNVDGTIKAIRE-FSYN 360 F P + + +++G IRE + Sbjct: 407 LQFITY-RPKVVLIDMNGQPHIIRENETLE 435 >gi|260425449|ref|ZP_05779429.1| decarboxylase, pyridoxal-dependent [Citreicella sp. SE45] gi|260423389|gb|EEX16639.1| decarboxylase, pyridoxal-dependent [Citreicella sp. SE45] Length = 406 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 112/362 (30%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +ID Q + + ++ A+K A + TL + ++S E+ Sbjct: 48 PTLVIDTQTVARHYAALAQGLGR--ARIHYAVKANPAPEILRTLTRLGSNFDAASRTEIA 105 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + ++ K A +F ++ K ++ +R+ Sbjct: 106 MCLAAGATADRISFGNTVKKVSDVAWAHAQGVTLFAADAEQELEKIAEHAPGARVYIRVI 165 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---MLK 180 + + + L GL FH + + ++ + Sbjct: 166 VENTEADWPLTRKFGCSRDKVLHLFAVARQLGLMPVGLSFHVGSQTRRAQMWAPVLDQVA 225 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY--SVQIYLEPGE 235 I ++ +++GGG D P + E++ ++ EPG Sbjct: 226 AIWHAARDAGHEMSLLNIGGGFPAFYGEAIDAPACYAADVMTLVHERFGDVPEVMAEPGR 285 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287 +V + VL +S+ N + S + + + + YQ T + Sbjct: 286 GLVAEAGAIAAEVLLVSKKSDNDLHRWVYLDIGKFSGLAETIEEAIRYQF-LTDRDHEDT 344 Query: 288 YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343 ++ G SC + D+ E ++ GDRI + Y + FNG + Sbjct: 345 GACILAGPSCDSADVLYEKRPVELPLGLRAGDRIVIRNCGAYTSTYASVGFNGFPPLDVV 404 Query: 344 VK 345 Sbjct: 405 AI 406 >gi|163868811|ref|YP_001610035.1| lysine/ornithine decarboxylase [Bartonella tribocorum CIP 105476] gi|161018482|emb|CAK02040.1| lysine/ornithine decarboxylase [Bartonella tribocorum CIP 105476] Length = 377 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 108/359 (30%), Gaps = 33/359 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + ++ A+K A + L+ ++S+ E+ Sbjct: 18 PCLIVDLDVVRDNYLNFKKALPQS--RIFYAIKANPAPEILRLLSSLGSSFDAASVAEIE 75 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E ++ + A + + ++ K A + Sbjct: 76 MALKAGATPERISFGNTIKKERDIAQAYALGVSLYAVDCIEEVEKIARAAPGARVFCRVL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + G+ FH + + L Sbjct: 136 T----DGKGAEWPLSRKFGCVPAMAVDVLKHAHQLGLQAYGVSFHVGSQQVDLSAWDRAL 191 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIY 230 + F ++ +++GGG + LK+ + Sbjct: 192 SDAAIVFKNLEQEGISLKLVNMGGGFPTRYLKDVPTEQVYGTAVFDSLKKHFGNRIPETI 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282 +EPG A+V N + T V+ IS+ N + + + + + + Y T + Sbjct: 252 IEPGRAMVGNAGVIRTEVVLISKKADNDNVRWVYLDIGKFNGLAETMDEAIRYP-IETSH 310 Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 + ++ G +C + D+ E + + IGD+I Y + FNG Sbjct: 311 DDKVMEPCILAGPTCDSADVLYEKTPYPLPLSLTIGDKILIHGTGAYTTTYASVAFNGF 369 >gi|330947151|ref|XP_003306849.1| hypothetical protein PTT_20120 [Pyrenophora teres f. teres 0-1] gi|311315441|gb|EFQ85060.1| hypothetical protein PTT_20120 [Pyrenophora teres f. teres 0-1] Length = 445 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 101/361 (27%), Gaps = 31/361 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + + + VK A+KC + + G +S E+ Sbjct: 66 FFIADLGEVYR--QHLRWKKNLSRVKPHYAVKCNPDPQVLRLMTALGLGFDCASKNEIET 123 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K + + +K K ++ LRI Sbjct: 124 VLNLGVDPSRIIYAQPCKTKSYVRYAAQSGVKQMTFDNADELYKTKQLFPDAELYLRILT 183 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + + + NV G+ FH F +++ Sbjct: 184 DDSASLCRLSQKFGAALDTTAELLELAKKLELNVVGVAFHVGSGASDPKAFIKAVQDARF 243 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F + + +GGG P+ + +++ EPG V+ Sbjct: 244 VFDQAAALGFNMHTLDVGGGFTGDVTFEPMAAVLSAALDEYFPPHIRVIGEPGRYYVSTA 303 Query: 242 TTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL---------LYQE 277 TL V+ + N S + H LY Sbjct: 304 FTLACHVIARRAVNDATLGTTSYMLYMNDGVYGNFSSIIFDHQHPVPRVLKNGNDVLYDV 363 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336 + Y + G +C D+ + +GD + FE++ Y FNG Sbjct: 364 RRSGYDTPSQVEYSIWGPTCDGIDVISSSCTFPELLDVGDWLYFEEMGAYTKCSATRFNG 423 Query: 337 I 337 Sbjct: 424 F 424 >gi|71005058|ref|XP_757195.1| hypothetical protein UM01048.1 [Ustilago maydis 521] gi|46096557|gb|EAK81790.1| hypothetical protein UM01048.1 [Ustilago maydis 521] Length = 519 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 53/419 (12%), Positives = 106/419 (25%), Gaps = 72/419 (17%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ ++R + A+KC + L G +S E+ Sbjct: 101 FFVADLSEVYR--QHLRWMRALPRIVPFYAVKCNPDPYVLQLLGALGTGFDCASNGEIEA 158 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y K N F+ + +L K K + + Sbjct: 159 VLKLGINPARIIYANPCKAASFVRHAAAHNVGLTTFDNMDELEKMKRYHPSCKLVVRILT 218 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S S L + ++ +V G+ FH F + Sbjct: 219 DDSKSAC--QLGLKFGAPLASVPRLLERARELELDVVGVSFHVGSGCYDPDSFRDAVYRA 276 Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---------- 229 F + + +GGG + + + + Sbjct: 277 RCAFEMGKQAGFSFDLLDVGGGFGHDNFEMVAGVLGPAIDAYFPDEDFAPGGKEVVGKVN 336 Query: 230 ----YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE-------- 277 EPG V + L T ++ + + + A + YQ Sbjct: 337 GLRIIAEPGRFYVHSAFALATNIIAVRRGEPSAAMDHVEATAPKAQVMYYQNDGLYGSFN 396 Query: 278 ---------SATIYPNTGPYTAM-----------------------------VCGRSCLA 299 + Y V G +C + Sbjct: 397 CVIFDHVKVHPKVLTLGHEYVYEPTIGSPGVRAVSAADSRLQQEAMTLESCSVWGPTCDS 456 Query: 300 GDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTI-AVKNVDGTIKAIRE 356 D + +++GD + +E++ Y I + FNGI I +R+ Sbjct: 457 IDCVRDHVELPKGLQVGDWLVYENMGAYTICAASTFNGIRRSEIRYTLGHGQDADIVRQ 515 >gi|283469362|emb|CAQ48573.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus ST398] Length = 400 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVEKFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIEAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|328947178|ref|YP_004364515.1| ornithine decarboxylase [Treponema succinifaciens DSM 2489] gi|328447502|gb|AEB13218.1| Ornithine decarboxylase [Treponema succinifaciens DSM 2489] Length = 389 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 51/372 (13%), Positives = 114/372 (30%), Gaps = 33/372 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP +I+ K+ N T ++ A+K + + L+ +S Y Sbjct: 23 LETPNIVINLNKVKKNFLTLKDSFPY--ARIFYAIKANPGEPVLELLSDLGSNFDIASRY 80 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ L + +Y K + ++ L + A + Sbjct: 81 ELDLISKFNVSPDRLSYGNTIKKAKDIKYFYDKGVRMFATDSRDDLKNIAEFAPGSKIYV 140 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176 + + S + + + + + G+ FH + + ++ Sbjct: 141 RILVENSATA---DWPLSRKFGCHPDMAYDLIVMARDLGLVPYGISFHVGSQQRDIGQWN 197 Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYS 226 + + F ++ I++GGG + D + + L + Sbjct: 198 DAIAKAKYLFNSLEEEESIKLSMINMGGGFPASYIDPTNDLSVYASEISRYLHDDFGDEI 257 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATI 281 QI LEPG ++V ++ L + V+ S + + + + I Sbjct: 258 PQIILEPGRSLVGDSGILTSEVILTSRKNNTALARWVYLDSGKFNGLIETLDESIKYPVI 317 Query: 282 YPNTGPY----TAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKNW- 333 P ++ G +C + DI ++ +K GD++ + Y + Sbjct: 318 TSQDAPEKKEGEVIIAGPTCDSMDIMYENAKYKLPVSLKAGDKVYWLSTGAYTSTYASVA 377 Query: 334 FNGINMPTIAVK 345 FNG Sbjct: 378 FNGFPPIKTYFM 389 >gi|237740055|ref|ZP_04570536.1| diaminopimelate decarboxylase [Fusobacterium sp. 2_1_31] gi|229422072|gb|EEO37119.1| diaminopimelate decarboxylase [Fusobacterium sp. 2_1_31] Length = 400 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 54/387 (13%), Positives = 129/387 (33%), Gaps = 43/387 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +YL D++ + N++ + ++ L ++KC + + ++ G ++SL EV++ Sbjct: 17 FYLYDEKIIKNSISNLRKVFPE--IEFLYSVKCNSNVNVLKSIFSEGFGADAASLAEVLM 74 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y+ K + V N +I +++ ++ + ++ L+K + + Sbjct: 75 ARKLDLDKNKIYYSAPGKTSKDIEVAINESNLIADSIEEIRRINMVSKSLNKVTEIGVRL 134 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + +S + + + G+ H + + + KN+ Sbjct: 135 NPDFSGKASKFGVDEDIFYDFLHNN--SCQNIKIVGIHVHLKSQELNVETLANYYKNMFL 192 Query: 185 EFGHFI----TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---------SVQIYL 231 +++++++G G+ V RLK + + I++ Sbjct: 193 LVEKVQNTLSYKLKYVNMGSGMGIQYSKSDVPLDLDRLKNLVKDNLSEFKKHNPDITIFI 252 Query: 232 EPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD-----YLLYQESATIYP-- 283 E G + + VLD + +I+ +++ + Y++ + Sbjct: 253 ETGRYVTAKSGFYIMKVLDKKVSYGTTYLILKNTLNGFIKPSVIKLVSKYEKENPVSWEP 312 Query: 284 ----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + G C A D+ E + GD I + Y Sbjct: 313 LFTSKDAFEILTFKEETDKKEKVTLVGNLCTATDVIAEDIVLPSMDCGDIIVINNAGSYA 372 Query: 328 INRKN-WFNGINMPTIAVKNVDGTIKA 353 F+ P +VDG+IK Sbjct: 373 AVLSPMQFSSQEKPVEVFLSVDGSIKI 399 >gi|257469983|ref|ZP_05634075.1| putative pyridoxal-dependent decarboxylase [Fusobacterium ulcerans ATCC 49185] gi|317064209|ref|ZP_07928694.1| orn/DAP/Arg decarboxylase 2 [Fusobacterium ulcerans ATCC 49185] gi|313689885|gb|EFS26720.1| orn/DAP/Arg decarboxylase 2 [Fusobacterium ulcerans ATCC 49185] Length = 403 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 136/393 (34%), Gaps = 50/393 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ + +++ + + +G + L ++K + +++ G ++S EV Sbjct: 12 PCYIYNGEQIASQCQKLKR--ELSGFEFLYSIKTNPFSHIIQNISKEGFGADAASAGEVF 69 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L + E Y+ K E + TII +++S++ A K + + + I+ Sbjct: 70 LSLKNGIAPEKIFYSAPGKTEEAIEICYGKCTIIADSISEIRHINAIAAKHKEIVKIGIS 129 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENKSFL--- 173 + S F + + S+ G + + E + G+ H + F Sbjct: 130 VN---SNFSMKNECGTSSKFGIDIEQLLKVEDTLAEYSNIKITGIHIHIQSQILDFQILG 186 Query: 174 -CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKYSVQIY- 230 + + +K IE+I+ G GI + ++L + + + + + Sbjct: 187 KYYKNCFELAKKIHSMKNVNIEFINFGSGIGALYRETQDKSVDLEKLNKMISEIAEENHA 246 Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYL---LYQESA 279 +E G I N T ++DI E++ IV++++ + + +Y+ + Sbjct: 247 VLNAKLLIETGRFITCNAGKYYTPIVDIKESLGQKYLIVENAMNGFMRPAIANLIYKAAG 306 Query: 280 TIYPNTGP-------------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 I P + G C A D+ E +IGD I Sbjct: 307 EILTGYEPLYTCQDEFSVQVLNESVEKEKVNIVGNLCTALDVIRENAEVNHAQIGDIIEI 366 Query: 321 EDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352 + Y + F+ +P D + Sbjct: 367 TNAGSYAYSLSPLLFSSHKIPKQYYLYKDKIYE 399 >gi|83593028|ref|YP_426780.1| ornithine decarboxylase [Rhodospirillum rubrum ATCC 11170] gi|83575942|gb|ABC22493.1| ornithine decarboxylase [Rhodospirillum rubrum ATCC 11170] Length = 421 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 116/365 (31%), Gaps = 25/365 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP ++D + N ++ A+K A + L ++SL E Sbjct: 59 ETPCLVVDLDVVEGNYRALRGAL--PQAEVYYAVKSNPAPPLVARLIALGSSFDTASLPE 116 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + L ++ K + A +F ++ K ++ R Sbjct: 117 IDLCLGLGADPAKLSFGNTIKKSKDIAAAYERGVRLFAFDAEEELEKLAEHAPGSQVFCR 176 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + K ++ +G+ FH + K + L+ Sbjct: 177 LFVDNVGAEWPLSRKFGCSVAMAGDLLIKAQALGLEAHGVSFHVGSQQKDLGQWDVALEK 236 Query: 182 IEKEFGH---FITQIEWISLGGGIHFTDKD-------YPVKDFCQRLKEFSEKYSVQIYL 231 + F ++ ++LGGG+ + + + + ++ + Sbjct: 237 AAELFRDLAAVGITLKMVNLGGGLPTSYGNRLPYGVDEYGAHVLGAVDRLFDGPRPRLIV 296 Query: 232 EPGEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 EPG + N L T V+ D +++ + + I I Sbjct: 297 EPGRYMGGNAGVLETEVVLVSRKDAADDRRWVYIDAGRFNGLAETEGEAIRYPIISDKDD 356 Query: 287 PYT--AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NM 339 T ++ G +C + DI + + +K GDR+ Y + + FNG + Sbjct: 357 GETGPVIIAGPTCDSVDILYDKAGYTLPLSLKAGDRLRLLSTGAYTTSYASVGFNGFLPL 416 Query: 340 PTIAV 344 + Sbjct: 417 KAHYL 421 >gi|28901517|ref|NP_801172.1| putative diaminopimelate decarboxylase protein [Vibrio parahaemolyticus RIMD 2210633] gi|153838144|ref|ZP_01990811.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus AQ3810] gi|260363069|ref|ZP_05775938.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus K5030] gi|260880356|ref|ZP_05892711.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus AN-5034] gi|260894723|ref|ZP_05903219.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus Peru-466] gi|260900073|ref|ZP_05908468.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus AQ4037] gi|28810064|dbj|BAC63005.1| putative diaminopimelate decarboxylase protein [Vibrio parahaemolyticus RIMD 2210633] gi|149748460|gb|EDM59319.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus AQ3810] gi|308089412|gb|EFO39107.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus Peru-466] gi|308092324|gb|EFO42019.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus AN-5034] gi|308110034|gb|EFO47574.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus AQ4037] gi|308112056|gb|EFO49596.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus K5030] Length = 400 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-VM 64 Y+ D L ++ ++ V+L A K + + TL Y+DG ++S E Sbjct: 28 AYVYDLNALEEHIKQLRHVLPK-NVELFYAAKANPSGPILKTLAPYVDGFEAASGGELAH 86 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121 L ++ E+ + D I ++++L + ++L++ I LR Sbjct: 87 LHQQQLDKPLIFGGPGKMPSELQQAIDLDVDAIHVESLTELKRIGALTERLNRPASIFLR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174 +N + + G + + + ++ G FH Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDCPQVSLKGFHFHLMSHQLDVER 206 Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 A+++ + + + E I+LGGG+ + +P +FC +L+ K Sbjct: 207 HLALMQRYFQVVKTWQQEFELGELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266 Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 + E G I VLDI +N+ ++ H + + Sbjct: 267 VQDWTLRFECGRFITAACGYYVMEVLDIKQNLGESYVIARGGTHHFRTPAAQSHDHPFVI 326 Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + A G+ C D+ V IGD + F Y Sbjct: 327 LKSEQHHEISHPIQHAQATFVGQLCTPKDVLARNQHVAHVDIGDYVVFTLAGAY 380 >gi|296425569|ref|XP_002842313.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638576|emb|CAZ86504.1| unnamed protein product [Tuber melanosporum] Length = 438 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 55/380 (14%), Positives = 113/380 (29%), Gaps = 37/380 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + V+ A+KC + L G +S E+ Sbjct: 64 FFVADLGEVYR--QHMRWKINLPRVEPFYAVKCNGDEKVLSLLAALGTGFDCASKAEIQQ 121 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K + + + + +K K H ++ LRI Sbjct: 122 VLNLGVNPSRIIYANPCKTASYIRYAAEENVRMMTFDNAEELYKVKKFFPHARLFLRICT 181 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + + +V G+ FH + F +++ + Sbjct: 182 DDSKALCRLSLKYGAPLDSTRHLLELAKDLRLDVVGVSFHVGSGSYDPTAFLTAVQDARR 241 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIV 238 F + + +GGG + ++ L ++Y + EPG V Sbjct: 242 VFNEATEVGYDLRTLDVGGG----YGNDNFEEIAAVLGPAIDEYFPPSVRVIAEPGRYYV 297 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSV---------------EAHVPDYLLYQESATIYP 283 ++ T+ T ++ ++ S + H + Y Sbjct: 298 SSAFTIATHIIARRTVQEDGSRNPSYMLYLNDGVYGNFSGILFDHQKPVPKVLKRGDKYF 357 Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336 T + G +C D F ++ GD + F D+ Y+ FNG Sbjct: 358 FGSTPTDSQLTKYSIWGPTCDGIDCISSFSNLPEVLEAGDWLYFSDMGAYSKCSATKFNG 417 Query: 337 I--NMPTIAVKNVDGTIKAI 354 N + V + G + + Sbjct: 418 FSDNHDVVYVVSDPGALALL 437 >gi|307566321|ref|ZP_07628760.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Prevotella amnii CRIS 21A-A] gi|307344898|gb|EFN90296.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Prevotella amnii CRIS 21A-A] Length = 400 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 121/386 (31%), Gaps = 23/386 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP +++ +++L ++ K + ++K + S Sbjct: 13 LSTPCFILKEEELKKSIYGFKTALDTKFPNSIIGYSVKTNSLPYCLKIAKDNGCYAEVVS 72 Query: 60 LYEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 +E L F YN VL + + + ++ ++ + K Sbjct: 73 YHEYRLALTCGFPKNHIIYNGPMKSKDTFLDVLKHKGIVNIESFREIEWLRELSCNEIYK 132 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168 +G+R+N +S + + SR G E + GL H + Sbjct: 133 VGIRLNIDISKISPLDENHKEDDSRFGFSADSADFKNAIQQISEYSNVRLVGLHIHRTSK 192 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225 +S + L + IE+I LGGG Y Sbjct: 193 TRSVDFYKNTLTYALSVINKYNLNIEYIDLGGGYFGEMPGKPTYADYVDAFYDVLKHSNN 252 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 + +I +EPG AIV + TV+D+ + V+ V + + Sbjct: 253 NYKIIVEPGNAIVASAFDYVCTVIDVKHHNDKNVVTTDGTRNDVDPLFHKTDYFKSFIYK 312 Query: 286 G-----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINM 339 + +V G +CL D + + +GD+I F V Y + F Sbjct: 313 KSSEKCQHKQLVGGLTCLENDRLFVLEKGETTLCLGDKIVFNRVGAYTLCLTPLFIHY-F 371 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365 P I VK D E++ D+ Sbjct: 372 PVIYVKRGDEYCVVREEWTEKDFIMK 397 >gi|302692730|ref|XP_003036044.1| hypothetical protein SCHCODRAFT_81402 [Schizophyllum commune H4-8] gi|300109740|gb|EFJ01142.1| hypothetical protein SCHCODRAFT_81402 [Schizophyllum commune H4-8] Length = 477 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 102/365 (27%), Gaps = 35/365 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + V A+KC + L G +S E+ Sbjct: 83 FFVADLGQVALQHERWTTALPE--VHPFYAVKCNPDPYVLRLLAALGTGFDCASNNEIAQ 140 Query: 66 GHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + K + K ++ LRI Sbjct: 141 VLKIGGIDPDRIIFANPCKATSFVRAAGRAGVHTMTFDNADELHKVARTHPAARLVLRIL 200 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S + L + S NV G+ FH ++ + Sbjct: 201 TDDSKALCRLGLKFGAPLAAALGLLETARSLGLNVVGVSFHVGSGCYDPDVYADAIARAA 260 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS---EKYSVQIYLEPGEAI 237 F + + +GGG + + + + ++I EPG Sbjct: 261 AAFAMGRKAGYEFNLLDIGGGFEDATFEAAARVLRDAINVHFPDRHERGIRIIAEPGRFF 320 Query: 238 VTNTTTLNTTVLD-----------------ISENIKNLVIVDSSVEAHVPDYLLYQES-- 278 V+ ++ T ++ + V + + D+ + Q Sbjct: 321 VSTAFSIATNIIARRATDEENANAGESDDEVKAMYYINDGVYGAFNCIMFDHQVVQPYVL 380 Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKN 332 + T V G +C + D+ + +++GD + F+++ Y + + Sbjct: 381 SMGGSFHVPSGAPMQTCSVWGPTCDSIDLVSKRATLPCALQVGDWLGFDNMGAYTVCAAS 440 Query: 333 WFNGI 337 FNG Sbjct: 441 QFNGF 445 >gi|189193697|ref|XP_001933187.1| ornithine decarboxylase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187978751|gb|EDU45377.1| ornithine decarboxylase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 445 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 100/361 (27%), Gaps = 31/361 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + + VK A+KC + + G +S E+ Sbjct: 66 FFIADLGEVYR--QHLRWKTNLSRVKPHYAVKCNPDPQVLRLMTALGLGFDCASKNEIET 123 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K + + +K K ++ LRI Sbjct: 124 VLNLGVDPSRIIYAQPCKTKSYVRYAAQSGVKQMTFDNADELYKTKQLFPDAELYLRILT 183 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + + + NV G+ FH F +++ Sbjct: 184 DDSASLCRLSQKFGASLDTTAELLELAKKLELNVVGVAFHVGSGASDPKAFIKAVQDARF 243 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F + + +GGG P+ + +++ EPG V+ Sbjct: 244 VFDQAAALGFNMHTLDVGGGFTGDVTFEPMAAVLSAALDEYFPPHIRVIGEPGRYYVSTA 303 Query: 242 TTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL---------LYQE 277 TL V+ + N S + H LY Sbjct: 304 FTLACHVIARRTVNDATLGTTSYMLYMNDGVYGNFSSIIFDHQHPVPRVLKNGNDVLYDV 363 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336 + Y + G +C D+ + +GD + FE++ Y FNG Sbjct: 364 RRSGYDTPSQVEYSIWGPTCDGIDVISSSCTFPELLDVGDWLYFEEMGAYTKCSATRFNG 423 Query: 337 I 337 Sbjct: 424 F 424 >gi|307107455|gb|EFN55698.1| hypothetical protein CHLNCDRAFT_133981 [Chlorella variabilis] Length = 527 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 99/364 (27%), Gaps = 34/364 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ + + + + V A+KC G+ L G +S E+ Sbjct: 154 FYVYNLAVVERLHAAWVRLMPR--VHPCYAVKCNPDEGLLAVLASLGAGFDCASEAELAR 211 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K + + S+ K + LRI Sbjct: 212 VLALGVAPDRLVYAHPCKPPKQIRWAQAHGVDLTTFDSESELAKMAQHHPGSGLLLRIRA 271 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 ++ L + + + V G+ FH K+ FSA ++ + Sbjct: 272 DDPAARCQLGNKYGAELACVPRLLEAAAGLGLRVRGVSFHVGSGAKNPAAFSAAIEAARR 331 Query: 185 EF---GHFITQIEWISLG---------GGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 F +++ + LG H P + F + +++ E Sbjct: 332 VFDLGAALGFRMDVLDLGGGFCGGEVGPDGHVDLGGVPDAINVALDRLFPDDGELRVIAE 391 Query: 233 PGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 PG T + + + + S+ V D+ Sbjct: 392 PGRYFAEACATYACYINGWRGRAVEGGQQAYDYYITDGLYGSMNCLVYDHAELAPVGLRS 451 Query: 283 PNTGP---------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 P P + + + G +C D ++ GD + F Y I Sbjct: 452 PLLPPVAAGEDAALHPSTLFGPTCDGLDTVCRDVPMPRLRNGDWVLFPRFGAYTIAGAVN 511 Query: 334 FNGI 337 FNG Sbjct: 512 FNGF 515 >gi|302542491|ref|ZP_07294833.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein [Streptomyces hygroscopicus ATCC 53653] gi|302460109|gb|EFL23202.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein [Streptomyces himastatinicus ATCC 53653] Length = 414 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 56/391 (14%), Positives = 104/391 (26%), Gaps = 38/391 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG----TTSS 58 TP Y+ D ++ GV++ A K + L + DG S Sbjct: 15 GTPLYVYDLDRIDAARRDLFGWLPE-GVEVYYAFKANPHVDLVRALRE-GDGPACKAEIS 72 Query: 59 SLYEVMLGHEKF--GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKL- 114 S E+ + G + E+ + T + L A Sbjct: 73 STGELAAALDGGYTGADILYTGPGKTPGELREAIARGVRTFSAESPGDLEHIGQAAVVHG 132 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNC 167 L S + S ++ G ++ GL + Sbjct: 133 VVADCLLRVNSATASASTGIRMTGKPTQFGIDSETVAELAPRLRSVPGTSIAGLHLFSQS 192 Query: 168 ENKS----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 K F ++ + + + +GGG + +D +L+ E Sbjct: 193 NAKDEDALIEEFRHTIEVAAQVEADLGVALRLLDIGGGFSVPYGRHGARDAYPKLRGELE 252 Query: 224 KYSVQIYL-----------EPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPD 271 + E G +V ++ TL +V ++ + ++ D+ + Sbjct: 253 AALDLRFPRWRRGELRIAVESGRYLVGDSGTLLASVSNVKTSRDRRFVILDAGINTFGGM 312 Query: 272 YLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + G + G C GD+ + GD I+ + Y Sbjct: 313 SGLGRILPVSIRIEGDAEVTGKGTLAGPLCTPGDLLAREIDLPELDEGDVIAIPNTGAYG 372 Query: 328 INRK-NWFNGINMPTIAVKNVDGTIKAIREF 357 F G P AV + R Sbjct: 373 PTASLLMFLGRPAPAEAVVRGGEVLSVSRIE 403 >gi|148977324|ref|ZP_01813938.1| putative diaminopimelate decarboxylase protein [Vibrionales bacterium SWAT-3] gi|145963437|gb|EDK28701.1| putative diaminopimelate decarboxylase protein [Vibrionales bacterium SWAT-3] Length = 400 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 120/354 (33%), Gaps = 34/354 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64 YL D +L ++ ++ V+L A K + + TL Y+DG ++S E+ Sbjct: 28 AYLYDLNELEQHIKQMRHVLPK-NVELFYAAKANPSAPILRTLAPYVDGFEAASGGELSH 86 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHK--KIGLR 121 L + E++ + D I ++++L + QKL++ I LR Sbjct: 87 LQQQLLNKPLIFGGPGKMPSELEQAIQLDVDAIHVESITELQRIGALTQKLNRSASIFLR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN----K 170 +N + + G + + + + G FH + Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGFDEAELDNAIMHLRDFPLIELKGFHFHLMSHQLDVSR 206 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 + +++ + + I+LGGG+ + +P +FC +L+ + Sbjct: 207 HLALVQRYFQVVKQWKEQYSLEDLIINLGGGMGINYQDPSQHFPWIEFCDKLEFLIAEEH 266 Query: 227 VQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 +Q + E G I VLDI +N+ ++ H + Sbjct: 267 MQDWKLRFECGRYISAPCGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQSHDHPFAV 326 Query: 283 PNTGPY----------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + TA + G+ C D+ + + IGD + F Y Sbjct: 327 IHNQQHSTISNPIHHTTANLVGQLCTPKDVLARNQSIEYIDIGDYLVFTLAGAY 380 >gi|118593254|ref|ZP_01550639.1| ornithine decarboxylase [Stappia aggregata IAM 12614] gi|118434145|gb|EAV40801.1| ornithine decarboxylase [Stappia aggregata IAM 12614] Length = 376 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 49/365 (13%), Positives = 109/365 (29%), Gaps = 30/365 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N + + A+K A + L +S+ E+ Sbjct: 17 PCVVVDLDIVRDNFEAFAKSL--PDTSVYYAVKANPAPEILSLLESLGSSFDCASVGEIE 74 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + +Y + A + V ++ K A K+ R Sbjct: 75 MVLATGASADRISYGNTIKKEKDIARAYQYGVRLFAVDCVEEVEKIARVA--PGSKVFCR 132 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + + +G+ FH + + + L Sbjct: 133 VLCDGVGAEWPLSRKFGCDPEMAPDVLEHAHRLGLVAHGVSFHVGSQQANLTAWDLALAM 192 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232 F +++ +++GGG + Q L + +E Sbjct: 193 AAGVFQEMALRGIELKMVNMGGGFPTRYLKDVPGVSTYGEAIFQALCKHFGNRLPSTIIE 252 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284 PG +V N + V+ IS N + + + + + Y Sbjct: 253 PGRGMVGNAGMIEAEVVLISRKSANDDVRWVYLDIGKFHGLAETMDEAIRYPIRTP-RDG 311 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NM 339 ++ G +C + D+ E + + IGD++ E Y FNG + Sbjct: 312 DITAPCVLAGPTCDSVDVLYEKTPYELPVSLSIGDKVLIEACGAYTTTYSTVGFNGFAPL 371 Query: 340 PTIAV 344 + + Sbjct: 372 ASFVI 376 >gi|255956161|ref|XP_002568833.1| Pc21g18390 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590544|emb|CAP96736.1| Pc21g18390 [Penicillium chrysogenum Wisconsin 54-1255] Length = 429 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 106/364 (29%), Gaps = 35/364 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D +++ G++ A+KC L + G +S+ E+ Sbjct: 52 FFIADLGQIIRQHRRWTQSV--PGIRPHYAVKCNRDPTFLKVLAELGTGFDCASIEEMRA 109 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + K A + + K ++ LRI Sbjct: 110 VLSLGVDPARILFANPCKAPAAVAFAREVGVLRTTFDNIDELDAIKIHMPEAQLLLRIYA 169 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + L + E+ + N+ G+ FH + F +K+ Sbjct: 170 NDEGAFICLGEKFGAQLDTTEELLSRAWELGLNMIGVSFHVGTGATNPASFCKGIKDARL 229 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F + + +GGG + ++ + EPG + Sbjct: 230 AFSQAERLGFHPKILDIGGGFQDDCFESMAPVIRDAIRSEF-PAGITTIAEPGRFFARSV 288 Query: 242 TTLNTTVL------------------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 TL V+ ++ I + + + YL+ + A + Sbjct: 289 YTLVCRVISRRRQLGSAALSGVPDMLYQNDGIYGNFMNVIMEKEIMVPYLVKNKKARVLL 348 Query: 284 NTGP---------YTAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNW 333 + + + G +C + D F+ VK+GD + ++++ Y Sbjct: 349 HKPKSEDALQVTDHRYSIWGPTCDSTDCVVREVTFDSEVKVGDWLKYKNMGAYTSTTATQ 408 Query: 334 FNGI 337 FNG Sbjct: 409 FNGF 412 >gi|46202329|ref|ZP_00053400.2| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 376 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 98/345 (28%), Gaps = 29/345 (8%) Query: 17 NLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETH 75 N + ++ A+K A + L + +S E+ L E Sbjct: 29 NYHSLRRWLPL--AEVYYAVKANPAPEIVRMLTEEGSRFDVASRGEIDLCLSNGTPAERI 86 Query: 76 AYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFIL 133 ++ K A F++ ++L K A + + + Sbjct: 87 SFGNTIKKQSDIAYAYAKGVRLYAFDSEAELEKLALAAPGSRVFCRILMTCDGAEWPLSR 146 Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFI 190 K + G+ FH + + + F Sbjct: 147 KFGCEIDMAKDLLVK--ARDLGLDPYGVSFHVGSQQTDLKQWDIAVGKAAMLFSALDAAG 204 Query: 191 TQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244 + ++LGGG + + + + + +EPG ++V + L Sbjct: 205 IDLRMVNLGGGFPARYRKEVDGIERYAEAVMDAMTKHFGNNIPAMIIEPGRSLVGDAGIL 264 Query: 245 NTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 T V+ IS ++ + + + Y+ T ++ G + Sbjct: 265 ETEVVLISRKGYEDDTRWVYLDVGKFGGLAETMDEAIKYR-IVTGRDGEDTAPVILAGPT 323 Query: 297 CLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 C + DI E + +K+GD++ Y + FNG Sbjct: 324 CDSADILYEKAGYEMPVSLKVGDKVRILSTGAYTTSYSAVNFNGF 368 >gi|330892496|gb|EGH25157.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. mori str. 301020] Length = 375 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 116/352 (32%), Gaps = 31/352 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D L ++ + A V+L A+K + M +TL + G SS E+ Sbjct: 25 AFVYDLDALQQHVTDVMAALPAA-VELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83 Query: 66 GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQK--LHKKIGLR 121 + + ++ D ++ + L N I +++++ + + A++ + + LR Sbjct: 84 VMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAEETGRVQPVFLR 143 Query: 122 INPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 INP + ++ + G E + + + G H S Sbjct: 144 INPQLPAAQSSKLAMAGSATPFGIDETDLAEAIRRVDSASHLTLKGFHVHAMSHQMSVER 203 Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225 +L + + + Q+ ++GGGI + + + C+ L++ + Sbjct: 204 HEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRLCRYLEKRLGEQ 263 Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 L EPG I VLD + +V + I+ Sbjct: 264 RDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQGHDHPVIH 323 Query: 283 PNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 P T V G+ C D+ K V IGD + Y Sbjct: 324 VPCAPATGASEEQAYTVVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYG 375 >gi|145606246|ref|XP_365739.2| ornithine decarboxylase [Magnaporthe oryzae 70-15] gi|145013956|gb|EDJ98597.1| ornithine decarboxylase [Magnaporthe oryzae 70-15] Length = 459 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 55/374 (14%), Positives = 106/374 (28%), Gaps = 46/374 (12%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D + + + VK A+KC + L + +G +S E+ Sbjct: 67 FFVADLGHVYR--QHLRWKKNLPRVKPFYAVKCNPDPKVLRLLAELGNGFDCASKTEIKQ 124 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y K + + F+ +L K + + + Sbjct: 125 VLDMGVDPSRIIYAQPCKTNSYVRYVAAEGVRQMTFDNADELYKIAKLFPEAELYLRILT 184 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S S + L + G NV G+ FH L F +++ Sbjct: 185 DDSSSLCRLSLKFGASLDATDGLLA--LARELGLNVVGVSFHVGSGASDPLAFLKAVRDA 242 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237 F ++ + +GGG D + + F V + EPG Sbjct: 243 NFVFEQAAAHGFDMKTLDVGGGFCSDDTFEAMAGVLRDALDEYFPPHRGVSLIAEPGRYF 302 Query: 238 VTNTTTLNTTVLDISE--------------NIKNLVIVDSSVEAHVPDYLLYQESAT--- 280 V+ T+ V+ +V V+ + + + + Sbjct: 303 VSAAFTIACNVIARRTVEDPNGSVNGSLAAAPSYMVYVNDGLYGNFSSIMFDHQHPVAKV 362 Query: 281 ----------------IYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDV 323 + + G +C D E F + + +GD + FED+ Sbjct: 363 LRSSGNFFYNTTDADSPESPSEGIEYSIWGPTCDGIDRISESVRFSQTIDVGDWLYFEDM 422 Query: 324 AGYNINRKNWFNGI 337 Y FNG Sbjct: 423 GAYTKCSATRFNGF 436 >gi|312885074|ref|ZP_07744762.1| Vibrioferrin biosynthesis protein PvsE [Vibrio caribbenthicus ATCC BAA-2122] gi|309367284|gb|EFP94848.1| Vibrioferrin biosynthesis protein PvsE [Vibrio caribbenthicus ATCC BAA-2122] Length = 406 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 63/354 (17%), Positives = 119/354 (33%), Gaps = 34/354 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64 YL D L ++ ++ V+L A K + + TL Y+DG ++S E+ Sbjct: 28 AYLYDLTALEQHIKQMKHVLPK-NVELFYAAKANPSEPILRTLAPYVDGFEAASGGELVH 86 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQKLHK--KIGLR 121 L ++ E++ + N D I ++++L + + L + I LR Sbjct: 87 LHQQQLNMPLIFGGPGKMPSELEQAIELNIDAIHVESLTELQRIATLTETLDRSATIFLR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLC 174 +N + + G + + ++ G FH Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALTLLRDFPKVHLKGFHFHLMSHQLDVDR 206 Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 A+++ + + + + I+LGGG+ + +P +FC +L+ K Sbjct: 207 HLALMQRYFQVVKDWQARFQLDELMINLGGGMGINYQNNEQHFPWTEFCDKLEFLIAKEQ 266 Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESAT-I 281 ++ E G I VLDI +N+ ++ H + I Sbjct: 267 VQDWKLRFECGRYISAPCGYYVMEVLDIKKNLGENFVIARGGTHHFRTPAAQSHDHPFAI 326 Query: 282 YPNTGPYT---------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 P+ P T A G+ C D+ + IGD + F Y Sbjct: 327 LPSNKPKTISLPLAQSQATFVGQLCTPKDVLARNQNIDHLDIGDYVVFTHAGAY 380 >gi|303314889|ref|XP_003067453.1| ornithine decarboxylase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240107121|gb|EER25308.1| ornithine decarboxylase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 490 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 50/378 (13%), Positives = 110/378 (29%), Gaps = 38/378 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D+ + N L K + V+ A+KC L ++ G +S E+ Sbjct: 40 FFVADEPFIHNQLKLWES--KLSDVEPFYAVKCNDNLRFLRILAEHGLGFDCASQSEMQR 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKKIGLRIN 123 Y +K + + ++ + A + ++ LR+ Sbjct: 98 ILNLGVEPHRILYAAPFKSEDGILYAKQHG-VTQTMFDTEDELRKLADYFPNAELYLRLW 156 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S+ L ++ + V GL FH F + + Sbjct: 157 ADDPSSRVRLGSKYGVQLPQAKELLVLAQELNMKVIGLCFHVGSSAADFDAYRQAIAFTR 216 Query: 184 KEF-------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGE 235 + + I I +GGG + + + ++++ ++ ++ EPG Sbjct: 217 EVYDFNQSLREDQRHPIRTIDIGGGFSLGNFESAATVIRKSIRQYFGDEKHLRWVAEPGR 276 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSV-----EAHVPDYLLYQE------------- 277 L VL + + + H+ D + + Sbjct: 277 YFAEEAFYLVCRVLGTRPRACLGNGIGADEKLPVGDIHINDGIYHNFLNALTEQVVPQPI 336 Query: 278 ------SATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINR 330 + + V G++C + D + K+GD + F + Y Sbjct: 337 LLNCTGTPYVSAADNGDPYTVWGQTCDSFDKIATNCVLPRRAKVGDWLCFPFMGAYTHVT 396 Query: 331 KNWFNGINMPTIAVKNVD 348 + FNG + + Sbjct: 397 GSDFNGFPRLKKIIWISN 414 >gi|254293834|ref|YP_003059857.1| Orn/DAP/Arg decarboxylase 2 [Hirschia baltica ATCC 49814] gi|254042365|gb|ACT59160.1| Orn/DAP/Arg decarboxylase 2 [Hirschia baltica ATCC 49814] Length = 415 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 112/356 (31%), Gaps = 24/356 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+ +++ + N A A+K + LN+ +S+ E Sbjct: 57 PTPHLVVELDVVERNYKALKTALPRANH--HYAIKANPHPDLLKRLNKLGCYFECASIQE 114 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + Y A + +F+ +L+K A Sbjct: 115 IDMCLAAGAQAKDILYGNPLKKASEIKAAYQRGVEQYVFDAALELDKIITHAPGSKVICR 174 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S + S + P L K S +G+ FH + + ++A + Sbjct: 175 ITTDGSGAVSPLSIKFGCPPEKALDWLLK--ANSSGLIAHGISFHTGSQQLNPASWNAPI 232 Query: 180 KNIEKEFGHFITQ----IEWISLGGGIHFTDKD------YPVKDFCQRLKEFSEKYSVQI 229 + + F Q ++ + +GGG + + ++ + + I Sbjct: 233 RAAAEVFEALRKQGVDTMKVLDVGGGFPTNYRKTVPPITTFCDAIAHYVAKYFKTNAPLI 292 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD--YLLYQESATIYPNTGP 287 Y EPG + + + V+ ++ + N I ++ + + G Sbjct: 293 YTEPGRYLPADAGFILAEVVLVAPSHTNPDIRWVYLDIGRYGGLVETQIDYPVYTHHEGE 352 Query: 288 Y-TAMVCGRSCLAGDIFG----EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 ++ G++C + D+ +H K + GDR+ Y NG Sbjct: 353 VGPVIMAGQTCDSNDVIYAEEFRYHLPKALTPGDRVILAHTGVYTTTYSTTLNGFP 408 >gi|167523140|ref|XP_001745907.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775708|gb|EDQ89331.1| predicted protein [Monosiga brevicollis MX1] Length = 495 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 44/384 (11%), Positives = 99/384 (25%), Gaps = 55/384 (14%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++L+D + ++ V A+KC + L +S E+ Sbjct: 67 FFLVDLGSVYRQHHLFK--QELPDVTPFYAVKCNPDPMILRCLASLGANFDCASRAEIEA 124 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E Y K + F++ +L K + + + Sbjct: 125 VLGIGVTPERIIYANPCKPASHIRYAKEVGVTLMTFDSAEELRKIAGIYPEASVVLRILA 184 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S S + L + + ++ N+ G+ FH + + Sbjct: 185 DDSKSACRLGLKFGAVVG-KQTTSLIEACKATGLNLAGVSFHVGSGCTDAAVYDDAIAKA 243 Query: 183 EKEFGH---FITQIEWISLGGGIH-----FTDKDYPVKDFCQRLKEFSEKYSVQI----- 229 + F + + +GGG + +++ + + Sbjct: 244 RQVFRDAEAYGFAPTVLDVGGGFPGEAVAGRTPKVRFESIANSIRDAVANHFSDVSGLRL 303 Query: 230 YLEPGEAIVTNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT- 285 EPG N TL +V+ ++ + + + D + Sbjct: 304 IAEPGRYYAANAMTLALSVIAKRVVAPETSGDISPSETTFQGMLDADELETIPAGAMVNY 363 Query: 286 --------------------------------GPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 Y + V G +C + D + + Sbjct: 364 FVNDGVYGSFNCIIFDHADVELQPLNYKKATGKKYNSTVWGPTCDSIDCVAKSCQLPDLD 423 Query: 314 IGDRISFEDVAGYNINRKNWFNGI 337 +G+ + + Y + FNG Sbjct: 424 VGEWLYVAGMGAYTGAAASTFNGF 447 >gi|91794425|ref|YP_564076.1| diaminopimelate decarboxylase [Shewanella denitrificans OS217] gi|91716427|gb|ABE56353.1| ornithine decarboxylase [Shewanella denitrificans OS217] Length = 391 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 116/359 (32%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+ +ID + + D + A + A+K A + L +S+YE Sbjct: 29 PTPFVVIDTKIIAKQYDDMVKNFPYAN--VYYAVKANPAKEVLTLLRDKGSNFDIASIYE 86 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + + +Y K +F + S+ + + A++ Sbjct: 87 LEMVTSIGVSADRISYGNTIKKRVDVRSFYEQGVRMFASDSEAD-LRMIAEEAPGSKIYV 145 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179 + + + + + + +G+ FH + + + + + Sbjct: 146 RILTEGTHTADWPLSRKFGCQNEMAYDLLVLARELGLVPHGISFHVGSQQRDIGAWDSAI 205 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ + Q++ I+LGGG D + LKE ++ Sbjct: 206 GKVKGIYDRLKEEHGIQLKMINLGGGFPANYIDKTNELATYAEQITHFLKEDFGDDLPEV 265 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG ++++N L + V+ IS + + + Sbjct: 266 ILEPGRSLLSNAGVLVSEVVLISRKSNTALERWVFTDVGKFSGLIETTDEAIKFPIYTDR 325 Query: 285 TGP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 TG ++ G +C + DI E + K + IGDR+ + Y FNG Sbjct: 326 TGELDKCVIAGPTCDSADIMYEHYSYGLPKDLAIGDRMFWLTAGAYTTTYSAVCFNGFP 384 >gi|114564566|ref|YP_752080.1| diaminopimelate decarboxylase [Shewanella frigidimarina NCIMB 400] gi|114335859|gb|ABI73241.1| ornithine decarboxylase [Shewanella frigidimarina NCIMB 400] Length = 391 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+ +ID Q + D + A + A+K A + L +S+YE Sbjct: 29 PTPFVVIDTQIVAKQYDDMVNNFPFAN--IYYAVKANPAKEILTLLRDKGSNFDIASIYE 86 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + + +Y K +F + S+ + + A++ Sbjct: 87 LEMVTSIGVSADRISYGNTIKKRVDVRSFFEQGVRMFASDSEAD-LRMIAEEAPGSKVYL 145 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179 + + + + ++ + +G+ FH + + + + + Sbjct: 146 RILTEGTHTADWPLSRKFGCQNEMAYDLLVLAKELGLQPHGISFHVGSQQRDIGAWDSAI 205 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK--DFCQRLKEFSEKYS----VQI 229 ++ + ++ I+LGGG D + + Q++K F E+ +I Sbjct: 206 GKVKSIYDRLKEEHGIVLKMINLGGGFPANYMDKTNELGVYAQQIKHFLEEDFGDELPEI 265 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG ++++N L + V+ IS + + + Sbjct: 266 ILEPGRSLLSNAGVLVSEVVLISRKSNTALERWVFTDVGKFSGLIETMDEAIKFPIYTER 325 Query: 285 TGP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 G ++ G +C + DI E + + IGDR+ + Y FNG Sbjct: 326 KGELDKCVIAGPTCDSADIMYEHYSYGLPVDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384 >gi|99078088|ref|YP_611346.1| ornithine decarboxylase [Ruegeria sp. TM1040] gi|99035226|gb|ABF62084.1| ornithine decarboxylase [Ruegeria sp. TM1040] Length = 390 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 114/364 (31%), Gaps = 28/364 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +ID + + ++ A+K A + L ++S E+ Sbjct: 32 PTLVIDSEAVARQYMGLARGLGR--ARIHYAVKANPAPEILRRLCALGSNFDAASRAEIE 89 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K A + V +L K + A H I + Sbjct: 90 MCRAAGASAARITFGNTIKKPADIAFAHALGITHFAADAVEELEKLAEHAPGAHVCIRIL 149 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---M 178 + S + P +G D+ + +GL FH + + + Sbjct: 150 VEASSADWPLSRKFGCAPDMAVG--LMDRCVALGLVPHGLSFHVGSQTRKPEMWEPILDQ 207 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSV--QIYLEP 233 + ++ + ++ +++GGG + P + +K + ++ ++ EP Sbjct: 208 VADVWQAARAAGHDLKLLNIGGGFPAGYRDAVMAPQDYASEVMKRVNARFPDAAEVMAEP 267 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNT 285 G +V + V+ +S + + S + + + + Y + T + Sbjct: 268 GRGLVAEAGAIAAEVMLVSRKHDSDLHRWVYLDIGKFSGLAETMDEAIRY-KITTDRDHE 326 Query: 286 GPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPT 341 ++ G SC + D+ E + GDR+ Y + FNG Sbjct: 327 TMGACVLAGPSCDSADVLYEKQPVQLPLGLTSGDRVVIHSCGAYTTTYASIGFNGFPPLD 386 Query: 342 IAVK 345 + V Sbjct: 387 VVVL 390 >gi|320587267|gb|EFW99747.1| ornithine decarboxylase [Grosmannia clavigera kw1407] Length = 467 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 58/380 (15%), Positives = 106/380 (27%), Gaps = 52/380 (13%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + V+ A+KC + L +G +S E+ Sbjct: 68 FFVADLGEVYR--QQLRWKMNLPRVRPFYAVKCNPDPKVLQLLAGLGNGFDCASKAEIEQ 125 Query: 66 GH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 Y K + + F+ +L K ++ LRI Sbjct: 126 VLNMGVDPSRIIYAQPCKTNSYVRYVAAHGVRQMTFDNADELRKIARL--FPDAELFLRI 183 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 S S L+ + NV G+ FH F +++ Sbjct: 184 LTDDSSSLCRLSLKFGASLDTTDSLLALARELGLNVVGVSFHVGSGASDPSAFLKAVQDA 243 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237 F + ++ + +GGG + + + F V I EPG Sbjct: 244 HSVFLQAAEYGYSLKTLDVGGGFCSDATFEAMAEVLRNALDEYFPAHRGVSIIAEPGRYF 303 Query: 238 VTNTTTLNTTVLDISENIKNLVIVD-------------SSVEAHVPDYLLYQESATIYPN 284 V++ T+ V+ + +V D L S+ ++ + Sbjct: 304 VSSAFTIACNVIARRTVENPPQQQQREDAVDGIVAPADPTYMLYVNDGLYGNFSSIMFDH 363 Query: 285 TGPY--------------------------TAMVCGRSCLAGDIFGEF-HFEKPVKIGDR 317 P + G +C D E F + +GD Sbjct: 364 QHPEAKVLQTGSRFLYDSETANAVAPTSGLEYSIWGPTCDGIDRITESIRFGHTLDVGDW 423 Query: 318 ISFEDVAGYNINRKNWFNGI 337 + FED+ Y FNG Sbjct: 424 LYFEDMGAYTRCSATRFNGF 443 >gi|127514320|ref|YP_001095517.1| ornithine decarboxylase [Shewanella loihica PV-4] gi|126639615|gb|ABO25258.1| ornithine decarboxylase [Shewanella loihica PV-4] Length = 391 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+ +ID + + D ++ + A+K A + L +S+YE Sbjct: 29 PTPFVVIDTKIIAKQYDDMVHNFPY--ASIYYAVKANPAKEVLTLLRDRGANFDIASIYE 86 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + + + +Y K + ++ + S+ + + A++ Sbjct: 87 LDMVSDIGVTPDRVSYGNTIKKRKDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRVYV 145 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179 + + + + + ++ + G+ FH + + + + + Sbjct: 146 RILTEGTHTADWPLSRKFGCQNEMAFELLVLAKTLGLEPYGISFHVGSQQRDIGAWDSAI 205 Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229 ++ F +++ I+LGGG D + LKE QI Sbjct: 206 AKVKSIFERLREEHGIELKMINLGGGFPANYLDKTNELGTYAEQITHFLKEDFGDQLPQI 265 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPN 284 LEPG ++++N L + V+ IS+ + + + + Sbjct: 266 ILEPGRSLLSNAGVLVSEVVLISKKSQTALERWVFTDVGKFSGLIETMDEAIKFPIYTER 325 Query: 285 TGP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 G ++ G +C + DI E + + IGDR+ + Y FNG Sbjct: 326 QGELDRCVIAGPTCDSADIMYEHYSYGLPLDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384 >gi|328469448|gb|EGF40394.1| vibrioferrin decarboxylase protein PvsE [Vibrio parahaemolyticus 10329] Length = 400 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-VM 64 YL D L ++ ++ V+L A K + + TL Y+DG ++S E Sbjct: 28 AYLYDLNALEEHIKQLRHVLPK-NVELFYAAKANPSGPILKTLAPYVDGFEAASGGELAH 86 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121 L ++ E+ + D I ++++L + ++L++ I LR Sbjct: 87 LHQQQLDKPLIFGGPGKMPSELQQAIELDVDAIHVESLTELKRIGALTERLNRPASIFLR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174 +N + + G + + + ++ G FH Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKGFHFHLMSHQLDVER 206 Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 A+++ + + + E I+LGGG+ + +P +FC +L+ K Sbjct: 207 HLALMQRYFQVVKTWQQEFELGELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266 Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 + E G I VLDI +N+ ++ H + + Sbjct: 267 VQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQSHDHPFVI 326 Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + A G+ C D+ V IGD + F Y Sbjct: 327 LKSEQHHEVSHPIQHAQATFVGQLCTPKDVLARNQHVAHVNIGDYVVFTLAGAY 380 >gi|329732404|gb|EGG68754.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 400 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALVMPNIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|57652470|ref|YP_185011.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus COL] gi|87160623|ref|YP_492842.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88193897|ref|YP_498682.1| hypothetical protein SAOUHSC_00082 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151220279|ref|YP_001331102.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. Newman] gi|161508391|ref|YP_001574050.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|258452269|ref|ZP_05700283.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus A5948] gi|262049760|ref|ZP_06022625.1| hypothetical protein SAD30_1859 [Staphylococcus aureus D30] gi|282923784|ref|ZP_06331461.1| diaminopimelate decarboxylase [Staphylococcus aureus A9765] gi|284023133|ref|ZP_06377531.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 132] gi|32441994|gb|AAP82070.1| SbnH [Staphylococcus aureus] gi|57286656|gb|AAW38750.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus COL] gi|87126597|gb|ABD21111.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201455|gb|ABD29265.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373079|dbj|BAF66339.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. Newman] gi|160367200|gb|ABX28171.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257860106|gb|EEV82940.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus A5948] gi|259162150|gb|EEW46727.1| hypothetical protein SAD30_1859 [Staphylococcus aureus D30] gi|282593026|gb|EFB98027.1| diaminopimelate decarboxylase [Staphylococcus aureus A9765] gi|315196461|gb|EFU26811.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus CGS01] gi|320139543|gb|EFW31414.1| pyridoxal-dependent decarboxylase, sheet domain protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320142140|gb|EFW33959.1| pyridoxal-dependent decarboxylase, sheet domain protein [Staphylococcus aureus subsp. aureus MRSA177] gi|329731721|gb|EGG68081.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Staphylococcus aureus subsp. aureus 21189] Length = 400 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERKILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPKIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKAWSEKHRFPLKHINLGGGIGVNYADLTNQFEWDNFVERFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|149184666|ref|ZP_01862984.1| ornithine/diaminopimelate/arginine decarboxylase,family 2 [Erythrobacter sp. SD-21] gi|148831986|gb|EDL50419.1| ornithine/diaminopimelate/arginine decarboxylase,family 2 [Erythrobacter sp. SD-21] Length = 408 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 51/375 (13%), Positives = 110/375 (29%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++ + + + N +++ A+K + + + L + +DG +S E+ Sbjct: 35 TPLFVYSQTMIDERVARLRAAMPNR-LRINYAIKANSFAPLLEHLARLVDGLDIASGGEL 93 Query: 64 MLG-HEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + G ++ +D E++A + T+ + ++ + +KL L Sbjct: 94 AMVETAGVAGARVSFAGPGKRDAELEAAIRAGVTLNLESENEARRALAIGEKLGVTPRLA 153 Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171 I + K G + I GL + Sbjct: 154 IRVNPDFELKGSGMKMGGGAKPFGVDAERVPALAREIIGAGCEFRGLHIFPGSQALDADA 213 Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI- 229 ++ L + + +++GGG + +R+ E+ + Sbjct: 214 VIETQASTLDLAHRIASEAGLDLPKLNMGGGYGIPYFNGDTPLDIERVGAALEERFANLP 273 Query: 230 --------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272 ++E G IV T +LD E+ +V H Sbjct: 274 DTLAGAELFIELGRYIVGEAGVYLTRILDRKESHGETYLVTDGGLHHQLAASGNFGTVVR 333 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 A+ + A V G C D + ++GD ++ Y + Sbjct: 334 RNYPLAIASRFDAEPSEVANVVGCLCTPLDRLADKAQLPRAEVGDLVAVFCAGAYGASAS 393 Query: 332 -NWFNGINMPTIAVK 345 + F G + Sbjct: 394 PSAFLGQGPAEEMLV 408 >gi|50420693|ref|XP_458883.1| DEHA2D09614p [Debaryomyces hansenii CBS767] gi|49654550|emb|CAG87035.1| DEHA2D09614p [Debaryomyces hansenii] Length = 450 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 56/376 (14%), Positives = 110/376 (29%), Gaps = 50/376 (13%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++++D ++ + V A+KC + L Q +S E+ + Sbjct: 64 FFVVDLGEVYRSYMKWKETL--PNVHAHYAVKCNTDLSVIKLLGQLGANFDCASKNEIDI 121 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 F + Y K A SN + + +L K + + + Sbjct: 122 VLGLGFSPDRIVYANPCKTNSYIRYANDSNVNLTTVDNPQELYKLHKYHPECGILLRIAT 181 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + + E NV G+ FH K F +++ Sbjct: 182 DDETAQCRLSTKFGCSVDTAVNELLP-LAAKLGLNVRGVAFHVGSGAKDFDSIHEAVRDS 240 Query: 183 EKEFGH------FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---------SV 227 F + + + +GGG + +K EKY ++ Sbjct: 241 RFIFDKGIDEYGYGKTMNILDIGGGF----EMETFDKSSAMVKLSLEKYFSSDYCSSQNI 296 Query: 228 QIYLEPGEAIVTNTTTLNTTVL-------------DISENIKNLVIVDSSVEAHVPDYLL 274 + EPG +V+ TL ++ DI + V ++ + D+ Sbjct: 297 KFIAEPGRLMVSKAFTLAAHIIARRDLPRSLKESNDIEAMLYINDGVYGNMNCILFDHQN 356 Query: 275 YQES-----------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFED 322 + T + + G +C D V++GD + F D Sbjct: 357 PVPHVLTHKNSLYYNEQVSDRTTKHQFSIWGPTCDGLDCVSNRSALYHNVEVGDWLYFPD 416 Query: 323 VAGYNINRKNWFNGIN 338 + Y FNG Sbjct: 417 LGAYTSAATTSFNGFK 432 >gi|253730474|ref|ZP_04864639.1| diaminopimelate decarboxylase protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725804|gb|EES94533.1| diaminopimelate decarboxylase protein [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 400 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|15923113|ref|NP_370647.1| diaminopimelate decarboxylase protein [Staphylococcus aureus subsp. aureus Mu50] gi|15925827|ref|NP_373360.1| hypothetical protein SA0119 [Staphylococcus aureus subsp. aureus N315] gi|148266550|ref|YP_001245493.1| Orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus subsp. aureus JH9] gi|150392588|ref|YP_001315263.1| Orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus subsp. aureus JH1] gi|156978453|ref|YP_001440712.1| hypothetical protein SAHV_0122 [Staphylococcus aureus subsp. aureus Mu3] gi|253316262|ref|ZP_04839475.1| hypothetical protein SauraC_09001 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255004921|ref|ZP_05143522.2| hypothetical protein SauraM_00590 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794473|ref|ZP_05643452.1| orn/DAP/Arg decarboxylase [Staphylococcus aureus A9781] gi|258407567|ref|ZP_05680703.1| orn/DAP/Arg decarboxylase [Staphylococcus aureus A9763] gi|258419840|ref|ZP_05682802.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A9719] gi|258438645|ref|ZP_05689868.1| diaminopimelate decarboxylase [Staphylococcus aureus A9299] gi|258443897|ref|ZP_05692235.1| diaminopimelate decarboxylase [Staphylococcus aureus A8115] gi|258445097|ref|ZP_05693334.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A6300] gi|258447701|ref|ZP_05695840.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A6224] gi|258455675|ref|ZP_05703630.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A5937] gi|269201775|ref|YP_003281044.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ED98] gi|282894345|ref|ZP_06302575.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A8117] gi|282928375|ref|ZP_06335978.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A10102] gi|295405394|ref|ZP_06815204.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A8819] gi|296275942|ref|ZP_06858449.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MR1] gi|297244730|ref|ZP_06928610.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A8796] gi|13700039|dbj|BAB41338.1| putative diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus N315] gi|14245890|dbj|BAB56285.1| probable diaminopimelate decarboxylase protein [Staphylococcus aureus subsp. aureus Mu50] gi|147739619|gb|ABQ47917.1| Orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus subsp. aureus JH9] gi|149945040|gb|ABR50976.1| Orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus subsp. aureus JH1] gi|156720588|dbj|BAF77005.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257788445|gb|EEV26785.1| orn/DAP/Arg decarboxylase [Staphylococcus aureus A9781] gi|257840792|gb|EEV65249.1| orn/DAP/Arg decarboxylase [Staphylococcus aureus A9763] gi|257844122|gb|EEV68509.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A9719] gi|257848204|gb|EEV72196.1| diaminopimelate decarboxylase [Staphylococcus aureus A9299] gi|257850781|gb|EEV74725.1| diaminopimelate decarboxylase [Staphylococcus aureus A8115] gi|257856005|gb|EEV78924.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A6300] gi|257858983|gb|EEV81847.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A6224] gi|257861887|gb|EEV84660.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A5937] gi|262074065|gb|ACY10038.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ED98] gi|282589959|gb|EFB95042.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A10102] gi|282763390|gb|EFC03520.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A8117] gi|285815848|gb|ADC36335.1| Siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus 04-02981] gi|294969469|gb|EFG45488.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A8819] gi|297178247|gb|EFH37494.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A8796] gi|312828640|emb|CBX33482.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129103|gb|EFT85099.1| hypothetical protein CGSSa03_13832 [Staphylococcus aureus subsp. aureus CGS03] gi|329725668|gb|EGG62147.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Staphylococcus aureus subsp. aureus 21172] Length = 400 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALVMPNIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|253733776|ref|ZP_04867941.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH130] gi|253728243|gb|EES96972.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH130] Length = 400 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPKIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|320007593|gb|ADW02443.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces flavogriseus ATCC 33331] Length = 412 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 56/397 (14%), Positives = 102/397 (25%), Gaps = 40/397 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM---DGTTSSS 59 TP Y+ D ++ D + V + A K + + SS Sbjct: 12 GTPSYVYDLDRVAAARDDLFAALPDE-VAVYYAAKANPHPEILREMRAGGPRVCRAEISS 70 Query: 60 LYEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E+ F G Y K + +A+ T + L D A +L Sbjct: 71 VGELDAVLRAGFAGAEILYTGPGKTTEELAEAMTRGVRTFSVESPGDLRHVGDTAVQLGI 130 Query: 117 KIGLRINPSVSY--------SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 I + + + L + + + GL F Sbjct: 131 TADCLIRVNNPTGAAATSIRMTGVPSQFGFDGETLPGLAAELRDVPGTTIAGLHFFPLSN 190 Query: 169 NKS----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKE 220 K F + + LGGG + + L Sbjct: 191 AKDEASLIAEFRHTIATAAALQRELGVDFRIVDLGGGFAAPYAVQGRRPVYGELREALAT 250 Query: 221 FSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273 +++ E G +V ++ TL T V+++ ++ +V + Sbjct: 251 SLDEHFPGWRDGAPRIACESGRYLVADSGTLLTGVVNVKDSRGTRYVVLDAGINTFGGMS 310 Query: 274 LYQESATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + G C GD+ G GD ++ + Y Sbjct: 311 GLGRILPVSIEPHESVGTDGVPVQLAGPLCTPGDLLGRQVPLADPAPGDLLTVPNAGSYG 370 Query: 328 INRK-NWFNGINMPTIAVKNVDGTIKAIREF---SYN 360 F G PT + D + R +Y Sbjct: 371 PTASLLMFLGRPAPTEIIVRGDDLVSVSRIEHTRTYE 407 >gi|307213746|gb|EFN89084.1| Ornithine decarboxylase [Harpegnathos saltator] Length = 418 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 56/380 (14%), Positives = 115/380 (30%), Gaps = 29/380 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D K++ D I K V A+KC + L +S E+ Sbjct: 35 FYIADIGKVIAKHDEW--IAKMPRVVPHFAIKCNPDPTVIKVLAALDACFDCASKQEIKQ 92 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + G+ + K D S+ FK K KI +RI Sbjct: 93 VMQHGVHGDRIIFAHPAKYPSHIIYAKKVDVKQMTVDSEYELFKIKDFFPEAKIVIRIRC 152 Query: 125 SVSYSKFILADPNRPFSRLG-EKCKDKIESEIKNVNGLMFHNNCENKSFLCF----SAML 179 + +L + + N++G FH + + Sbjct: 153 DSKNTPVVLGMKFGSDPNEETVRLIQLTKDLGLNLHGFSFHVGSPCVEPEAYGRGIAMCK 212 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------YSVQIYL 231 + I ++ I +GGG + +F + E Y Sbjct: 213 QLITVSKSIGCEGVQLIDIGGGFPGECGT-NIDEFASIINEAIRDVDPAIKVISEPGSYY 271 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGP 287 + + +L S+ I+ + + + + L + + Sbjct: 272 VASSFTLASYLHSKRVILKGSKMIRMYYMNCGVFNSFIDELLGLRARVPQLLSEPMSNEK 331 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 + + + G + + D+ + + IGD + ++D+ Y+I + FNG +P + Sbjct: 332 FCSSLWGPTADSYDLIVKDVLLPELHIGDWLVWKDMGAYSIALASTFNGFPIPVVV---- 387 Query: 348 DGTIKAIREFSYNDYYNNLS 367 IR+ + ++ S Sbjct: 388 ----PIIRKSQWENFEKRPS 403 >gi|50286011|ref|XP_445434.1| hypothetical protein [Candida glabrata CBS 138] gi|49524739|emb|CAG58345.1| unnamed protein product [Candida glabrata] Length = 463 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 56/379 (14%), Positives = 113/379 (29%), Gaps = 33/379 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + V+ A+KC + L +S E+ Sbjct: 87 FFVCDLGEIERLYANWWK--ELPRVQPFYAVKCNPDLKIIRKLADLGANFDCASKLEIDK 144 Query: 66 GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K + + + K K ++ LRI Sbjct: 145 VLSMDVNPERIIYANPCKAASFIRYAATNKVMKSTFDNVEELHKIKKFHPESQLFLRIAT 204 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S ++ L+ + + I++ N+ G+ FH F +++ Sbjct: 205 DDSTAQCRLSTKYGCEMERVDSLLECIKTLGLNLVGVSFHVGSGASDFSSLYKAVRDARI 264 Query: 185 EFGH-----FITQIEWISLGGGIHFTDKDYPVKDFC-QRLKEFSEKYSVQIYLEPGEAIV 238 F + +++ + +GGG + F E V I EPG +V Sbjct: 265 VFDKAVNDYGLPELKTLDVGGGFQLESFKESSAVLRLALDEYFPESSKVDIIAEPGRYLV 324 Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDY----LLYQESATIYPN 284 + TL+ V+ I N ++ + H + Sbjct: 325 ASAFTLSANVIAKRKLNEAESMIYVNDGVYGNMNCILFDHQEPTPRTLWHDNNYHYDDFD 384 Query: 285 TG--------PYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + PY + G +C D + ++ + + +GD + F + Y + FN Sbjct: 385 STSPNPITTCPYKVSMWGPTCDGLDCITKEYYMKHDLVVGDWLYFPRLGAYTSSAATPFN 444 Query: 336 GINMPT-IAVKNVDGTIKA 353 G + I N + Sbjct: 445 GFDQTADIIYINSENHDNI 463 >gi|294849057|ref|ZP_06789801.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A9754] gi|294823949|gb|EFG40374.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A9754] Length = 400 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERKILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPSKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPKIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKAWSEKHRFPLKHINLGGGIGVNYADLTNQFEWDNFVERFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|218676892|ref|YP_002395711.1| Vibrioferrin biosynthesis protein PvsE [Vibrio splendidus LGP32] gi|218325160|emb|CAV27052.1| Vibrioferrin biosynthesis protein PvsE [Vibrio splendidus LGP32] Length = 400 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64 YL D L ++ ++ V+L A K + + TL Y+DG ++S E+ Sbjct: 28 AYLYDLDALELHIKQMRHVLPK-NVELFYAAKANPSTPILRTLAPYVDGFEAASGGELTH 86 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK--IGLR 121 L ++ E++ + I ++++L + QKL++ I LR Sbjct: 87 LHQQQLNKPLIFGGPGKMLSELEQAIELDVEAIHVESLTELKRIGSLTQKLNRPASIFLR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLC 174 +N + + G + + + + G FH Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMYLRDFPLIKLKGFHFHLMSHQLDVDR 206 Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 A+++ + + I+LGGG+ + +P +FC +L+ K Sbjct: 207 HLALMQRYFQVVKEWKKTFSLDELIINLGGGMGINYQNPKQHFPWMEFCDKLEFLISKEH 266 Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 ++ E G I VLDI +N+ ++ H + Sbjct: 267 LQDWKLRFECGRYISAPCGYYVMEVLDIKKNLGEHFVIARGGTHHFRTPAAQSHDHPFAI 326 Query: 283 PNTGPY----------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + TA + G+ C D+ + IGD + F Y Sbjct: 327 VKSKQHPTISNPIDQTTATLVGQLCTPKDVLARSQNIAHIDIGDYVVFTLAGAY 380 >gi|91223064|ref|ZP_01258330.1| putative diaminopimelate decarboxylase protein [Vibrio alginolyticus 12G01] gi|91191877|gb|EAS78140.1| putative diaminopimelate decarboxylase protein [Vibrio alginolyticus 12G01] Length = 400 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-VM 64 Y+ D L ++ ++ V+L A K + + TL Y+DG ++S E Sbjct: 28 AYVYDLSALEEHIKQLRHVLPK-NVELFYAAKANPSGPILKTLAPYVDGFEAASGGELAH 86 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121 L ++ E+ + D I ++++L + ++L++ I LR Sbjct: 87 LHQQQLDKPLIFGGPGKMPSELQQAIELDVDAIHVESLTELQRIGALTERLNRPASIFLR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174 +N + + G + + + ++ G FH Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKGFHFHLMSHQLDVER 206 Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 A+++ + + + E I+LGGG+ + +P +FC +L+ K Sbjct: 207 HLALMQRYFQVVKAWQQEFELGELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266 Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 + E G I VLDI +N+ ++ H + + Sbjct: 267 AQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQSHDHPFVI 326 Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + A G+ C D+ V IGD + F Y Sbjct: 327 LKSEQHHEISHPIQHAQATFVGQLCTPKDVLARNQHVTHVDIGDYVVFTLAGAY 380 >gi|23307119|dbj|BAC16548.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus] Length = 400 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 118/354 (33%), Gaps = 34/354 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64 YL D L ++ ++ VKL A K + + +TL Y+DG ++S E+ Sbjct: 28 AYLYDLNALEEHIKQLRHVLPK-NVKLFYAAKANPSGPILNTLAPYVDGFEAASGGELTH 86 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121 L ++ E+ + D I ++++L + ++L++ I LR Sbjct: 87 LHQQQLDKPLIFGGPGKMPSELQQAIELDVDAIHVESLTELQRIGALTERLNRPASIFLR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174 +N + + G + + + ++ G FH Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKGFHFHLMSHQLDVER 206 Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 A+++ + + + E I+LGGG+ + +P +FC +L+ K Sbjct: 207 HLALMQRYFQVVKAWQQEFELGELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266 Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 + E G I VLDI +N+ ++ H + + Sbjct: 267 VQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQSHDHPFVI 326 Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + A G+ C D+ V IGD + F Y Sbjct: 327 LKSEQHHDISHPIQHAQATFVGQLCTPKDVLARNQHVAHVDIGDYVVFTLAGAY 380 >gi|148252905|ref|YP_001237490.1| ornithine decarboxylase [Bradyrhizobium sp. BTAi1] gi|146405078|gb|ABQ33584.1| ornithine decarboxylase [Bradyrhizobium sp. BTAi1] Length = 380 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 109/358 (30%), Gaps = 29/358 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + +N ++ A+K A + L ++++ E+ Sbjct: 21 PCLVVDLDVVRDNYMNFAKAL--PDSRVFYAVKANPAPEVLSLLASLGSSFDTATVAEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + +Y + A + +++ K A + Sbjct: 79 MALAAGATPDRISYGNTIKKERDIARAYALGIRLFAVDCAAEVEKISRAAPGAKVFCRIL 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +++ L+ + + D + G+ FH + + + L Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVEVLDLAKRLGLEPCGISFHVGSQQRKVKAWDRALAM 196 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232 F + +++GGG + + L++ + +E Sbjct: 197 ASTVFRDCAERGINLSMVNMGGGFPTKYLKDVPPVVQYGRSIFRALRKHFGNQIPETIIE 256 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284 PG +V N + + V+ IS + ++ + + + Y Sbjct: 257 PGRGMVGNAGIIESEVVLISRKSDEDELRWVYLDIGKFGGLAETMDESIRYAIRTPHDGA 316 Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 ++ G +C + D+ E + + IGD++ E Y + FNGI Sbjct: 317 DMT-PCVLAGPTCDSADVMYEKLPYPLPVTLSIGDKVLIEGTGAYTSTYSSVAFNGIP 373 >gi|118580411|ref|YP_901661.1| diaminopimelate decarboxylase [Pelobacter propionicus DSM 2379] gi|118503121|gb|ABK99603.1| diaminopimelate decarboxylase [Pelobacter propionicus DSM 2379] Length = 439 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 61/410 (14%), Positives = 115/410 (28%), Gaps = 47/410 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D+ + + D L + G+ + A+K + + + SS+ E Sbjct: 24 GTPVYLHDRAFIEQSCDQLLNMPNAFGLHVRYAMKANSDRTVLRVVTGKGLDLDCSSVDE 83 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 H + + ++ N +++Q D A++ Sbjct: 84 AARAHSAGIPYDRMMLTTQEVPLGQEREELEGMIRNGLKYNVCSLTQYRLIADFAKQAGI 143 Query: 117 KIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKI----ESEIKNVNGLMFHNNCEN-K 170 + +R++P S S G D + K + H + + Sbjct: 144 DLSIRVHPGASGGGESQTRDTGSEYSCFGVHLNDIPTVVEMARDKGLRFTQVHVHIGSGG 203 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD--------YPVKDFCQRLKEFS 222 + + + +S GGG+ RLKEF Sbjct: 204 DPEKWRENIDRELGFVRSYFPDAGTVSFGGGLKVARMPGEKQADINELGTYAAARLKEFK 263 Query: 223 EKYSV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA 279 E+ ++ +EPG +V N+ + T V+D + ++ + L E Sbjct: 264 EQTGRALRMEIEPGTFVVANSGYIITRVMDKKLTNEMNFLLVDGGMELLSRPLLYGSEHP 323 Query: 280 TIYPNT---------------GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDR 317 + GR C +GD +IGD Sbjct: 324 ISIVGQDGTLRSSEYDSYSVGTATPYGIVGRCCESGDSVRLDNEGTIVPVQVAEAEIGDY 383 Query: 318 ISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365 + Y+ + +N +K D + IR N Sbjct: 384 VVIGGTGAYSESMSPENYNSHRKAPAVMKMKDAELVLIRKRQVREQLVQN 433 >gi|298693389|gb|ADI96611.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ED133] Length = 400 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 + K + ++ I+LGGGI + + + L E Sbjct: 200 DVVTLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|259415136|ref|ZP_05739058.1| ornithine decarboxylase [Silicibacter sp. TrichCH4B] gi|259349046|gb|EEW60800.1| ornithine decarboxylase [Silicibacter sp. TrichCH4B] Length = 405 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 112/362 (30%), Gaps = 24/362 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +ID + + ++ A+K A + L ++S E+ Sbjct: 47 PTLVIDSEAVARQYMGLARGLGR--ARIHYAVKANPAPEILRRLCALGSNFDAASRAEIE 104 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + K A + + K I +RI Sbjct: 105 MCRAAGASAARITFGNTIKKPADIAFAHALGITHYAADAVEELEKLAEHAPGAHICIRIL 164 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---MLK 180 S + + L+ + D+ + +GL FH + + + + Sbjct: 165 VEASSADWPLSRKFGCAPDMAVGLMDRCVALGLVPHGLSFHVGSQTREPQMWEPILDQVA 224 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSV--QIYLEPGE 235 ++ + ++ +++GGG + P + +K + ++ ++ EPG Sbjct: 225 DVWQAARAAGHDLKLLNIGGGFPAGYRNAVMAPEVYATEVMKRVNARFPDAAEVMAEPGR 284 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287 +V + V+ +S + + S + + + + Y + T + Sbjct: 285 GLVAEAGAIAAEVMLVSRKHDSDLHRWVYLDIGKFSGLAETMDEAIRY-KITTDRDHETM 343 Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343 ++ G SC + D+ E +K GDR+ Y + FNG + Sbjct: 344 GACVLAGPSCDSADVLYEKQPVQLPLGLKSGDRVVIHSCGAYTTTYASIGFNGFPPLDVV 403 Query: 344 VK 345 V Sbjct: 404 VL 405 >gi|221122172|ref|XP_002161495.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 468 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 118/365 (32%), Gaps = 37/365 (10%) Query: 36 LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSN 92 +K + L + +S E+ + + + + A N Sbjct: 1 VKSNPNPVVIALLARLGVNFDCASKCEIETVLDLGVNPDRIIFANPCKQESHVKYANTKN 60 Query: 93 CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 + F++ + +K K ++ LRI S S F L +K + Sbjct: 61 VRKMTFDS--EGELYKVKENFPGAELVLRIKVDDSKSTFKLGRKFGASLETTQKLLQLAK 118 Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY 209 NV G+ FH F +K+ F + +GGG + Sbjct: 119 DLDLNVIGVSFHVGTGCYDAALFYNAVKSAADVFQQGDIIGFTFTLLDIGGGFPGFKDET 178 Query: 210 PVKDFCQ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI------SENIKN 257 + + F K ++ I EPG+ V + TL V+ + ++N + Sbjct: 179 ISMENIADKLNLSLAEFFPSKRNLSIIAEPGKYFVESAFTLCCNVISVKEVSNNNKNEQF 238 Query: 258 LVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVK 313 + ++ V D L ++ + + + G +C + D E + + Sbjct: 239 MYYLNDGVYTSFKDVLFGKKFIPFLLQESSTSLLFKSSLWGPTCDSTDCISEEIYLPKLS 298 Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI---REFS-------YN--- 360 + D + F+++ Y+ + FNG N P I N + + R +S + Sbjct: 299 VQDWLYFKNMGAYSTCFASKFNGFNPPVIYYMNPELAENIVNNTRRYSQLFSDVVFEMLP 358 Query: 361 DYYNN 365 DY Sbjct: 359 DYKER 363 >gi|310794283|gb|EFQ29744.1| pyridoxal-dependent decarboxylase [Glomerella graminicola M1.001] Length = 455 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 64/365 (17%), Positives = 110/365 (30%), Gaps = 37/365 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + VK A+KC + L G +S E+ Sbjct: 74 FFVGDLGEVYR--QHMRWKLNLPRVKPFYAVKCNPDPKVLQLLAALGTGFDCASKTEIDQ 131 Query: 66 GH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E Y K + + F+ +L K ++ LRI Sbjct: 132 VLNMGTAPERIIYAQPCKTTSYLRYVKAMGVKQMTFDNADELRKISKL--FPEAELYLRI 189 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 S L+ + + NV G+ FH + F + + Sbjct: 190 MTDDESSLCRLSMKFGAAKEATNELLGVAKDLGLNVVGVSFHVGSGASDPMAFYKAVYDA 249 Query: 183 EKEF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + F + +++ + +GGG T +D + F +V I EPG V Sbjct: 250 YEVFEQGRAYGFEMKTLDIGGGFCGDTFEDMAAVLRGALDEYFPASSNVNIIAEPGRYYV 309 Query: 239 TNTTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDY---------LL 274 + T+ ++ + N S + H + Sbjct: 310 SAAFTIACNIIARRTVDDPALNEKRYMVYVNDGLYGNFSSIMFDHQHPVAKVLRAGTSTV 369 Query: 275 YQESATIYPNTGPYT-AMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKN 332 Y A G T V G +C D E FE+ + +GD + FED+ Y Sbjct: 370 YDTPAANACPDGEGTRYSVWGPTCDGIDRITETISFEQELDVGDWLYFEDMGAYTKCSAT 429 Query: 333 WFNGI 337 FNG Sbjct: 430 KFNGF 434 >gi|82749837|ref|YP_415578.1| diaminopimelate decarboxylase protein [Staphylococcus aureus RF122] gi|82655368|emb|CAI79750.1| probable diaminopimelate decarboxylase protein [Staphylococcus aureus RF122] Length = 400 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 56/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L N ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLPN-NCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G D + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDDVDDVIEAALAMPKIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKAWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|283767867|ref|ZP_06340782.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus H19] gi|283461746|gb|EFC08830.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus H19] Length = 400 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 55/381 (14%), Positives = 108/381 (28%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 + K + ++ I+LGGGI F + + + L E Sbjct: 200 DVVTLYFKKAKAWSEKHQFPLKHINLGGGIGFNYADLTSQFEWDNFVENFKTLIVEQEMG 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|306821216|ref|ZP_07454830.1| diaminopimelate decarboxylase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550728|gb|EFM38705.1| diaminopimelate decarboxylase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 394 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 57/382 (14%), Positives = 123/382 (32%), Gaps = 43/382 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ +K + +N K + L ++K + T++ G+ ++S EV+ Sbjct: 15 PCYVYEKDIIESNCKQLQNAVK--DAEFLYSIKANPFLPVVKTISSQGIGSDAASSNEVL 72 Query: 65 LG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L + E Y+ K + T I ++ +L + K+ + + + + + Sbjct: 73 LSEQAQIPAEMIYYSAPGKTEQDIIKTWGKCTFIADSFHELELLEQKSAQENTTLEVGVR 132 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFLCFSAMLKNI 182 +++ F + + F + D + + G+ H + S N Sbjct: 133 IHPNFTMFEGSIVSSKFGIDEDLLFDTKWNYPHLTLTGIHVHLQSQILDSSILSRYYHNC 192 Query: 183 EKEFGHFI----TQIEWISLGGGIHFTDKDYPVKD---------FCQRLKEFSEKYSVQI 229 I++I+ G GI + K + K+ E + ++ Sbjct: 193 YNLAEKVNSLPHANIKFINFGSGIGIVYDEINEKPLNISEIGQSIGEIAKKNKEGLNAKL 252 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYL--------------- 273 +LE G + N T T ++D + K V+V +++ + + Sbjct: 253 FLETGRFLTCNAGTYFTPIIDRKISRGKTYVVVQNALNGFLRPTMSELLKKTLGQDSSIA 312 Query: 274 ---------LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + I V G C A D+ + IGD ++ + Sbjct: 313 PQEPFFTSVNQCNFSIIENTNEVEVVDVVGTLCTALDVMAKDISLPKSDIGDVLAVSNAG 372 Query: 325 GYNINRKN-WFNGINMPTIAVK 345 Y F+ +P + Sbjct: 373 SYAFTLSPFAFSSHELPKEYLY 394 >gi|282915455|ref|ZP_06323227.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus D139] gi|282320558|gb|EFB50896.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus D139] Length = 400 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 + K + ++ I+LGGGI + + + L E Sbjct: 200 DVVTLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEMG 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|269964974|ref|ZP_06179139.1| putative diaminopimelate decarboxylase protein [Vibrio alginolyticus 40B] gi|269830277|gb|EEZ84502.1| putative diaminopimelate decarboxylase protein [Vibrio alginolyticus 40B] Length = 400 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64 Y+ D L ++ +I V+L A K + + TL Y+DG ++S E+ Sbjct: 28 AYVYDLSALEEHIKQLRHILPR-NVELFYAAKANPSGPILKTLAPYVDGFEAASGGELTH 86 Query: 65 LGHEKFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121 L ++ A+ + D I ++++L + ++L++ I LR Sbjct: 87 LHQQQLDKPLIFGGPGKMLSELQQAIELDVDAIHVESLTELQRIGALTERLNRPASIFLR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174 +N + + G + + + ++ G FH Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKGFHFHLMSHQLDVER 206 Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224 A+++ + + + E I+LGGG+ + +P +FC +L+ K Sbjct: 207 HLALMQRYFQVVKAWQQEFELGELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266 Query: 225 -YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 + E G I VLDI +N+ ++ H + + Sbjct: 267 VQHWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQNHDHPFVI 326 Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + A G+ C D+ V IGD + F Y Sbjct: 327 LKNEQHHEISHPIQHAQATFVGQLCTPKDVLARNQHVAHVDIGDYVVFTLAGAY 380 >gi|120564762|gb|ABM30201.1| PvsE [Vibrio alginolyticus] Length = 400 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64 Y+ D L ++ ++ V+L A K + + TL Y+DG ++S E+ Sbjct: 28 AYVYDLSALEEHIKQLRHVLPR-NVELFYAAKANPSGPILKTLAPYVDGFEAASGGELTH 86 Query: 65 LGHEKFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121 L ++ A+ + D ++++L + ++L++ I LR Sbjct: 87 LHQQQLDKPLIFGGPGKMLSELQQAIELDVDAFHVESLTELQRIGALTERLNRPASIFLR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174 +N + + G + + + ++ G FH Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKGFHFHLMSHQLDVER 206 Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 A+++ + + + + I+LGGG+ + +P +FC +L+ K Sbjct: 207 HLALMQRYFQVVKTWQQEFKLSELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266 Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 + E G I VLDI +N+ ++ H + + Sbjct: 267 VQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQSHDHPFVI 326 Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + A G+ C D+ V IGD + F Y Sbjct: 327 LKSEQHHEISHPIQHAQATFVGQLCTPKDVLARNQHVAHVDIGDYVVFTLAGAY 380 >gi|152996197|ref|YP_001341032.1| ornithine decarboxylase [Marinomonas sp. MWYL1] gi|150837121|gb|ABR71097.1| Ornithine decarboxylase [Marinomonas sp. MWYL1] Length = 388 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 114/360 (31%), Gaps = 27/360 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+ +ID + A + A+K A + L +S YE Sbjct: 25 DTPFVVIDTDIIDEAYTELTKGFPVAD--IFYAIKANPAPEILTLLRDRGSNFDVASRYE 82 Query: 63 V--MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + + +Y K + +F T S+ + ++ A+ Sbjct: 83 LDKLFAIGGISPDQVSYGNTIKKAKDVRYFYEKGVRMFATDSEAD-LRNIAKAAPGSRVY 141 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAM 178 + + R + ++ + G+ FH + + + A Sbjct: 142 VRILTEGTVTADWPLSRKFGCRPDMAMDLLVLAKELGLIPYGISFHVGSQQRDIGAWDAA 201 Query: 179 LKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQ 228 + +++ F +E I++GGG + + + + + F E+ + Sbjct: 202 IASVKVIFERLKEEDGIVLEMINMGGGFPANYIARTNDLATYAEEITRFLEEDFGTDLPR 261 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYP 283 I LEPG ++++N L + V+ IS + + + Sbjct: 262 IILEPGRSLISNAGVLVSEVVLISRKSHTALNRWVFTDVGKFSGLIETLDESIKYPIHVE 321 Query: 284 NTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 G ++ G +C + DI E + + IGDR+ + Y FNG Sbjct: 322 KGGELEEVIIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTTYSAVEFNGFP 381 >gi|87200351|ref|YP_497608.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM 12444] gi|87136032|gb|ABD26774.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM 12444] Length = 408 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 44/376 (11%), Positives = 94/376 (25%), Gaps = 34/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L + + A+K + + + +DG +S E Sbjct: 34 GTPLFVYSRALLTRRVQDLRAAMPERLA-IHYAVKANPYIPLLSHMLELVDGFDIASGGE 92 Query: 63 VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + ++ +D E++A ++ T+ + + + A +L L Sbjct: 93 LAIVRDAGIDPAMVSFAGPGKRDAELEAAIAAAVTLNLESEGEATRALAIAGRLGIVPRL 152 Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKDKIESEIKNV------NGLMFHNNCENK--- 170 I + + ++ G + K + G + Sbjct: 153 AIRVNPDFDLKGSGMKMGGGAKPFGIDAERVPALARKLISAGAEWRGFHIFAGSQALSAD 212 Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224 + + + + +LGGG + Sbjct: 213 AIIETQAQTIGLAARLAEETGAPLPKCNLGGGFGIPYFPGDEPVDVVAVGAALGDQFAAL 272 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 +E G +V TV+D E+ + +V H Sbjct: 273 PDVLRDTAFCIELGRYLVGEAGIYLATVIDRKESHGEVYLVTDGGLHHQLAASGNFGTVV 332 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 AT + A + G C D + GD + Y + Sbjct: 333 RRNYPSAIATRFGAAVEEEASIVGCLCTPLDRLADKGGFPRTDTGDLVVIFCAGAYGASA 392 Query: 331 KN-WFNGINMPTIAVK 345 F G + Sbjct: 393 SPAAFLGQGPAREMLV 408 >gi|28871704|ref|NP_794323.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854956|gb|AAO58018.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 359 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 109/356 (30%), Gaps = 30/356 (8%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 +ID + D K+ A+K A + + L +S+YE+ Sbjct: 2 VIDTAIISKAYDDLRAGFDF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYELDKVL 59 Query: 68 E-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G E +Y K + ++ + L A + + Sbjct: 60 SCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVRILTE- 118 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNI 182 + + + I + + G+ FH + + + A + + Sbjct: 119 --GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAIAKV 176 Query: 183 EKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQIYLE 232 + F ++ I++GGG ++ + LKE +I LE Sbjct: 177 KVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEIILE 236 Query: 233 PGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 PG ++++N L + V+ ++ + + + + G Sbjct: 237 PGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWTEKKGE 296 Query: 288 -YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 297 MEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGFP 352 >gi|83310487|ref|YP_420751.1| diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1] gi|82945328|dbj|BAE50192.1| Diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1] Length = 376 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 101/345 (29%), Gaps = 29/345 (8%) Query: 17 NLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETH 75 N ++ A+K A + L + +S E+ L E Sbjct: 29 NYHGLRRWLPL--AEVYYAVKANPAPEIVRMLTEEGSRFDVASRGEIDLCLANGAPAERI 86 Query: 76 AYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFIL 133 ++ K A F++ ++L K + A + + + Sbjct: 87 SFGNTIKKQSDIAYAYAKGVRLYAFDSEAELEKLAEAAPGSRVFCRILMTCDGAEWPLSR 146 Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFI 190 K + G+ FH + + + F Sbjct: 147 KFGCEIDMAKDLLVK--AREMGLDPYGVSFHVGSQQTDLRQWDIAVGKAAMLFSALDAAG 204 Query: 191 TQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244 ++ ++LGGG + + + + + +EPG ++V + L Sbjct: 205 IELRMVNLGGGFPARYRKEVDGLERYAEAVMDAMTKHFGNNIPSMIIEPGRSLVGDAGIL 264 Query: 245 NTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 T V+ IS + + ++ + + + Y+ T ++ G + Sbjct: 265 ETEVVLISRKGYDDDVRWVYLDVGKFGGLAETMDEAIKYR-IVTTRDGDDTAPVVLAGPT 323 Query: 297 CLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 C + DI E + +K+GD++ Y + FNG Sbjct: 324 CDSADILYEKAGYEMPLSLKVGDKVRILSTGAYTTSYSAVNFNGF 368 >gi|297528776|ref|YP_003670051.1| Orn/DAP/Arg decarboxylase 2 [Geobacillus sp. C56-T3] gi|297252028|gb|ADI25474.1| Orn/DAP/Arg decarboxylase 2 [Geobacillus sp. C56-T3] Length = 401 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 48/375 (12%), Positives = 104/375 (27%), Gaps = 37/375 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D L + + + V+L A+K A + T+ Y+ G +S E+ Sbjct: 24 AYVYDLDNLRVHTASLSASLPPS-VRLFYAVKANADERILKTVAPYVTGFEVASGGELQK 82 Query: 66 GHEKF-GGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 F D E+ A + I +V +L + A + + + + Sbjct: 83 VRRLFADSPVIFGGPGKTDEELTAAIEERVALIHVESVWELQRLNWIAARRQTTVRVLLR 142 Query: 124 PS-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKSFLCF 175 + + ++ G + E+ + G FH+ + Sbjct: 143 VNLRQAASGATLHMAGKPTQFGIDEQHIAEAIHTALTLPSIDLQGFHFHSMSNHTDEQAH 202 Query: 176 SAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-------K 224 + ++ + + +++GGG+ + + + Sbjct: 203 LSFIETCLSFVAQAETTYGRRFSVVNVGGGVGVHYNEPDRQFRWNWFSKELNLLLRRQAP 262 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYP 283 + E G I + VLD+ N + H+ + Sbjct: 263 PHWTVIFELGRFIAAHNGYYAAEVLDLKTNYGTHFAIIRGGTHHLRLPAAWKMNHPFLVI 322 Query: 284 NTGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + + G C DI +++GD + F Y + Sbjct: 323 PIDEWPYPFNRPSLHNQRVTLAGELCTPNDILARDVPCARLRVGDIVLFRCAGAYGWDIS 382 Query: 332 NW-FNGINMPT-IAV 344 + F P I + Sbjct: 383 HHDFLSHPHPEFIYL 397 >gi|103487413|ref|YP_616974.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256] gi|98977490|gb|ABF53641.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256] Length = 409 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 48/376 (12%), Positives = 98/376 (26%), Gaps = 34/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D L A V+L A+K + + +DG +S E Sbjct: 35 DTPLFVYDSAMLAARAAEWRAAMPAA-VQLHYAMKANPYPPLLAFMAGLVDGFDVASGGE 93 Query: 63 VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + ++ +D E++A L T+ + + + A L L Sbjct: 94 LKAALASGMDAAHISFAGPGKRDRELEAALEAGATLNLESAGEAERALAIAAHLGATPRL 153 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCENKS-- 171 + + + ++ + + ++ + G + Sbjct: 154 AVRVNPDFDLKGSGMKMGGGAKPFGVDAAAVPALVRRLIDAGADWRGFHIFAGSQALDAA 213 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + T ++LGGG+ + E + Sbjct: 214 AIAEMQAQTVALAARLADAIGTAPPLVNLGGGMGVPYFPGDTAVDAAAVGEALGETLAAR 273 Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 + +E G +V T ++D + +V H Sbjct: 274 DAALADSRFAMELGRWLVAEAGVYLTRIVDRKVSHGETFLVTDGGLHHQLAASGNFGTVI 333 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 A + T V G C D G+ +GD I+ Y + Sbjct: 334 RRNYPIAVANAFGREPVETVAVVGCLCTPLDRLGDQVALPRADVGDLIAIFQAGAYGASA 393 Query: 331 KN-WFNGINMPTIAVK 345 F G + Sbjct: 394 SPAAFLGQGPARELLV 409 >gi|156554146|ref|XP_001599279.1| PREDICTED: similar to ENSANGP00000020224 [Nasonia vitripennis] Length = 475 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 51/396 (12%), Positives = 105/396 (26%), Gaps = 63/396 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++L+D L+ T + + V A+KC + TL +S E++ Sbjct: 38 PFHLLDVGDLVRKHRTW--VERIPRVVPHYAVKCNPNPTVIKTLAALGASFDCASKQEIV 95 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + K + +++ +L K ++ + Sbjct: 96 TVMAYGVPADRIIFANPVKTPTQIRYAQKVGVSKMTADSMWELRKIRELYPDAK----II 151 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSA- 177 I + + GE+ I ++G FH + S Sbjct: 152 IRFRCDAAVSDSYLGQKFGCDPGEEAVRLIRGCRDLGLELHGFSFHVGSPCGEVMALSRG 211 Query: 178 ---MLKNIEKEFGHFITQIEWISLGGGIH--------FTDKDYPVKDFCQRLKEFSEKYS 226 I+ ++ I +GGGI + C KE +Y Sbjct: 212 IGICKYLIDVARSLGHHNVQLIDIGGGIPGDSDFLLDEVWSYFTRLHRCFVFKELLFEYK 271 Query: 227 VQIYLEPGEA-IVTNTTTLNTTVLDISENIKNLVIVDSSVEA------------------ 267 I+ N + V + + A Sbjct: 272 HLIFWLGDYYRTNWNYRSKVKKVTTTTFKHTWALPWYYVTSAVKAVAYVHGKKIVHEGNR 331 Query: 268 --HVPDYLLYQESAT------------------IYPNTGPYTAMVCGRSCLAGDIFGEFH 307 ++ + N + + + G +C + D + Sbjct: 332 KKYMYYVTDGAYGSFLDELIQLKARLPDPLNKSHSVNEEKHLSTLWGPTCDSLDCIAKDV 391 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 ++GD + ++D+ Y FNG + PT+ Sbjct: 392 HLPEFQVGDWLYWKDMGAYTSCLSTNFNGFSCPTVY 427 >gi|226357231|ref|YP_002786971.1| diaminopimelate decarboxylase [Deinococcus deserti VCD115] gi|226319221|gb|ACO47217.1| putative diaminopimelate decarboxylase (DAP decarboxylase) (Meso-2,6-diaminoheptanedioate carboxy-lyase) [Deinococcus deserti VCD115] Length = 409 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 114/391 (29%), Gaps = 40/391 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D L + A +L A+K + +TL ++DG +S E+ Sbjct: 18 AYVYDLAALDEHAAWLRATLPAA-CELFYAVKANPEPRILETLAPHVDGFEVASGGELAQ 76 Query: 66 GHEKFGG-ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIGLR 121 +F D E A+ + + + + S+L + A+ + + LR Sbjct: 77 VSARFPQVPVIFGGPGKTDSELAQALEAGAEVLHVESRSELERLAWTARSRGRVAAVLLR 136 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLC 174 +N V + G + + + G FH Sbjct: 137 VNLRVGDLPDTPLTMGGRPTPFGIDAAEIPGCLAWLEQHPELQLRGFHFHLLSHQLDARA 196 Query: 175 FSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS---- 226 +L ++ + + +++GGGI ++ + + Sbjct: 197 HLRLLAAYAEQVRAWQSRYGLTTDLLNVGGGIGVNYRNPAQSFDWSTFCTGMQALTATLP 256 Query: 227 -VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESAT--IY 282 V+ LE G + V+D+ N+ +V + Sbjct: 257 GVRWRLELGRFVTAGCGYYAMQVIDLKHNLGEAFVVARGGTHQFRTPAAQGHNHPFEVLA 316 Query: 283 PNTGPYTA----------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 ++ P+ V G+ C D+ V+ GD + F Y N + Sbjct: 317 VDSWPHAYSRVELAGGLVTVVGQLCTPKDVLARRVPVGRVRAGDLLLFSLAGAYAWNISH 376 Query: 333 -WFNGINMPTIAV--KNVDGTIK---AIREF 357 F P + + G ++ RE Sbjct: 377 QQFLSHPAPQMVFLAVDQGGPVQQEGTRREE 407 >gi|331697150|ref|YP_004333389.1| Ornithine decarboxylase [Pseudonocardia dioxanivorans CB1190] gi|326951839|gb|AEA25536.1| Ornithine decarboxylase [Pseudonocardia dioxanivorans CB1190] Length = 374 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 112/359 (31%), Gaps = 29/359 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TPY ++D + + G ++L A+K + TL G ++S E Sbjct: 15 PTPYLVLDPAVVARRHADVVAAF--PGAEVLYAVKACPHPAVLRTLVAAGAGFDAASPAE 72 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 V L A + + ++V L++ A + Sbjct: 73 VDLCLAAGADPARIGLGNPVRGAAATAAAHRAGVRRFVTDSVEDLDELAAHAPGAAVLVR 132 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLCFS 176 L ++ S S + F F + D + + G+ FH + ++ Sbjct: 133 LLVDDSGSATPFF-----GKFGATPQVATDLLRACASRGLVAAGVTFHAGSQQTRPTTYA 187 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYSVQIYLEPG 234 A + Q + +GGG+ + +F + + Q+ LEPG Sbjct: 188 AGVAAALAVARDAGLQHPVLDVGGGLPVAYRADVPSFTEFAAAIGGVDGIDAAQLVLEPG 247 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLYQESATIYPNTG 286 A+V L T+VL +S ++A + + Y Sbjct: 248 RALVAEAGVLRTSVLRVSRRPGVDHRRWVYLDAGRYQGLAETENEAIGYPLRVPGRDGPC 307 Query: 287 PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NMP 340 ++ G +C D+ + ++ GD + Y + + FNG +P Sbjct: 308 G-PVVLAGPTCDGDDVLYRRTPYALPLSLRAGDHVDLLHAGAYTASYASVGFNGFGPLP 365 >gi|296534024|ref|ZP_06896539.1| possible lysine decarboxylase [Roseomonas cervicalis ATCC 49957] gi|296265643|gb|EFH11753.1| possible lysine decarboxylase [Roseomonas cervicalis ATCC 49957] Length = 376 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 112/366 (30%), Gaps = 30/366 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++D ++ N ++ A+K A + L ++SL EV Sbjct: 16 TPCLVVDVDRVAENYGRLKAAMPL--ARIYYAVKANPAAPILSRLVDLQSQFDAASLEEV 73 Query: 64 MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + E ++ + A + F++ +L K A + Sbjct: 74 RMCLAAGARPEAISFGNTVKKESAIQAAYEAGVRMFAFDSEPELRKLARSAPGAKVYCRI 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + + L+ + + ++ + G+ FH + + A + Sbjct: 134 LVENVGAEW--PLSRKFGCEAEMAKELMVLARDLGLDPYGISFHVGSQQTRTAAYEAAIA 191 Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYSVQIYL---- 231 + F + +LGGG + + DF + ++ Sbjct: 192 KVAMIFTDLKEAGINLRMANLGGGYPVRYRSEVPEIDDFGAAIMGAMVEHFGNALPEILV 251 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLYQESATIYP 283 EPG IV + L++ V+ +S K+ + ++ + + Y+ Sbjct: 252 EPGRFIVGDAGVLSSEVVLVSSKGKDDPVRWVYLDIGRFGGLAETEGEAIKYRFRTPHDG 311 Query: 284 NTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI-N 338 + G +C + D E + ++ GDR+ Y + FNG Sbjct: 312 L-AEGPVTIAGPTCDSTDTLYEKSNYRLPLALQSGDRVELLSTGAYVTTYASQGFNGFAP 370 Query: 339 MPTIAV 344 + + Sbjct: 371 LAEHYI 376 >gi|94310055|ref|YP_583265.1| Orn/DAP/Arg decarboxylase 2 [Cupriavidus metallidurans CH34] gi|93353907|gb|ABF07996.1| diaminopimelate decarboxylase (DAP decarboxylase) [Cupriavidus metallidurans CH34] Length = 397 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 53/376 (14%), Positives = 94/376 (25%), Gaps = 35/376 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 YL D L L A+K + + L DG +S E+ Sbjct: 21 AYLYDLDDLRLRTTRLRAALPE-QCALYYAVKANSDAPVLRALLGVADGFEVASFGEIER 79 Query: 66 GHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 A+ K I + QL++ A++ + + + Sbjct: 80 VRGVDAEVPIAFGGPGKTDAELEGALRLGVGLIHVESTLQLSRLDAVARRQGRCADVLLR 139 Query: 124 PSVS--------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 + + + L + V GL H + Sbjct: 140 ANPAYGLPGATLQMGGGATQFGIDEALLPDVLAQSRTMPNVRVVGLHVHAGSNSLDADTH 199 Query: 176 ----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEKYSV 227 + ++ +EW+++GGGI + + FC L + + Sbjct: 200 LALIDRHIALAKRLRDLHGLTLEWLNVGGGIGIDYQNPERHFDWDRFCHGLAALLRETAP 259 Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 +I E G I V+D+ N V H Sbjct: 260 STRIVFECGRFISAGCGCYVAEVIDLKRNHDKWFAVLRGGTHHFRLPVSWQHNHPFQVLP 319 Query: 285 T------------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 +CG C D+ +++GDRI+F Y + + Sbjct: 320 NDHWDYPFPRPVVERQPVTLCGELCTPKDVLAREVPVDRLRVGDRIAFTMAGAYGWHISH 379 Query: 333 W-FNGINMPTIAVKNV 347 F P Sbjct: 380 HDFLSHPHPERVFIGG 395 >gi|302331871|gb|ADL22064.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus JKD6159] Length = 400 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPTNHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDEVIEAALAMPKIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKAWSEKYRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHDAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|49482366|ref|YP_039590.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus MRSA252] gi|221142240|ref|ZP_03566733.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|257424263|ref|ZP_05600692.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257426939|ref|ZP_05603341.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257429577|ref|ZP_05605964.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 68-397] gi|257432224|ref|ZP_05608587.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus E1410] gi|257435183|ref|ZP_05611234.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus M876] gi|282902714|ref|ZP_06310607.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus C160] gi|282907116|ref|ZP_06314964.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282912362|ref|ZP_06320158.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus WBG10049] gi|282912980|ref|ZP_06320772.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus M899] gi|282921396|ref|ZP_06329114.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C427] gi|282922607|ref|ZP_06330297.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus C101] gi|283959571|ref|ZP_06377012.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus A017934/97] gi|293498035|ref|ZP_06665889.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus 58-424] gi|293511624|ref|ZP_06670318.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus M809] gi|293550233|ref|ZP_06672905.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus M1015] gi|295426669|ref|ZP_06819308.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589130|ref|ZP_06947771.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MN8] gi|49240495|emb|CAG39152.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus MRSA252] gi|257273281|gb|EEV05383.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257276570|gb|EEV08021.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257280058|gb|EEV10645.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 68-397] gi|257283103|gb|EEV13235.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus E1410] gi|257285779|gb|EEV15895.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus M876] gi|269939651|emb|CBI48019.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus TW20] gi|282314828|gb|EFB45214.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus C101] gi|282315811|gb|EFB46195.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C427] gi|282323080|gb|EFB53399.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus M899] gi|282324058|gb|EFB54374.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus WBG10049] gi|282330015|gb|EFB59536.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282597173|gb|EFC02132.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus C160] gi|283789163|gb|EFC27990.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus A017934/97] gi|290919280|gb|EFD96356.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus M1015] gi|291096966|gb|EFE27224.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus 58-424] gi|291465582|gb|EFF08114.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus M809] gi|295129121|gb|EFG58748.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus EMRSA16] gi|297577641|gb|EFH96354.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MN8] gi|302750005|gb|ADL64182.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|312436765|gb|ADQ75836.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus TCH60] gi|315194579|gb|EFU24968.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus CGS00] gi|329312822|gb|AEB87235.1| Pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus T0131] Length = 400 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LVFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREIQIEAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|88858624|ref|ZP_01133265.1| diaminopimelate decarboxylase, PLP-binding protein [Pseudoalteromonas tunicata D2] gi|88818850|gb|EAR28664.1| diaminopimelate decarboxylase, PLP-binding protein [Pseudoalteromonas tunicata D2] Length = 401 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 56/391 (14%), Positives = 115/391 (29%), Gaps = 30/391 (7%) Query: 1 MIKT---PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57 +++T P+++ D +L +L VKL A+K + TL++ Sbjct: 15 LVQTQDHPFFIYDLDQLAAHLAPLT---AQNVVKLWYAVKANPLSSVIQTLDKAGFNFDV 71 Query: 58 SSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKL 114 +S E+ + E K + + T + +++Q+ AQ Sbjct: 72 ASAGELNQVLKQGIAAERVLNTGPAKSKKQINHFLEAGVRTFVAESLNQVAWLNQAAQNH 131 Query: 115 HKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKD-----KIESEIKNVNGLMFH---- 164 ++ + + + + + + G + + N GL Sbjct: 132 QVQLRILLRVQLRWPEGEKNPLGGNSLTPFGLGTQQWQHLNIADYPQLNFVGLHIFQWGN 191 Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLK 219 +K +S M+ ++ +E + LGGG+ + Sbjct: 192 MLSTDKLAQLWSQMIAPLQALADQLGFALEILDLGGGLGIPYTTAQDPLNWPQLLDALSN 251 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQES 278 E ++++E G V V++ EN ++ + H+ + Q Sbjct: 252 IKFESGVNELWMELGRYAVGECGHYVNPVVEQKENFGYHQLITAGGINHILRPAVTNQAF 311 Query: 279 ATIY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-F 334 N ++ G C A D G + D + F V Y F Sbjct: 312 PAQLLRQSNAPAREFLIHGPLCTALDSLGTHQLPADLNENDHVIFSQVGAYGFTESMPYF 371 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + V + + DYY Sbjct: 372 LCHELAAEYVIENNQVRCVRSCET-ADYYLR 401 >gi|323440347|gb|EGA98060.1| diaminopimelate decarboxylase protein [Staphylococcus aureus O11] gi|323443170|gb|EGB00789.1| diaminopimelate decarboxylase protein [Staphylococcus aureus O46] Length = 400 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 55/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L N ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLPN-NCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEATLAMPNIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|115265540|dbj|BAF32802.1| pyridoxal-dependent decarboxylase of pyridoxal binding domain [Pseudomonas syringae pv. actinidiae] Length = 359 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 110/356 (30%), Gaps = 30/356 (8%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 +ID + D + K+ A+K A + + L +S+YE+ Sbjct: 2 VIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYELDKVM 59 Query: 68 E-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G E +Y K + ++ + L A + + Sbjct: 60 SCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGSKVYVRILTE- 118 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNI 182 + + + I + + G+ FH + + + A + + Sbjct: 119 --GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAIAKV 176 Query: 183 EKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQIYLE 232 + F ++ I++GGG ++ + LKE +I LE Sbjct: 177 KVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEIILE 236 Query: 233 PGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 PG ++++N L + V+ ++ + + + + G Sbjct: 237 PGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWTEKKGE 296 Query: 288 -YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 ++ G +C + DI E + + IGDR+ + Y + FNG Sbjct: 297 MEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGFP 352 >gi|325278873|ref|YP_004251415.1| Diaminopimelate decarboxylase [Odoribacter splanchnicus DSM 20712] gi|324310682|gb|ADY31235.1| Diaminopimelate decarboxylase [Odoribacter splanchnicus DSM 20712] Length = 412 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 64/396 (16%), Positives = 137/396 (34%), Gaps = 34/396 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 I TP YL+++ LNNL K + + + K + + S Sbjct: 14 IGTPAYLVNEDLFLNNLRDIRAAFKSLYQNIVVGYSFKTNYLPYLCKLALEQGCYAEVVS 73 Query: 60 LYEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQL---NKFKDKAQKL 114 E + + F G +N ++ E L N I ++ ++ + K+ + Sbjct: 74 FLEYQIALKVGFTGNQIIFNGPIKRESEFVTALLNGSVINIDSDYEIDYLERLKEIYPEN 133 Query: 115 HKKIGLRINPSV-SYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNC 167 +IGLR+N S+ + R G +K +++ + L H + Sbjct: 134 QFEIGLRVNVSIKDENGCSAIYGEEESGRFGFMEDEIDKAIERLTKINCKIISLHGHTSS 193 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQRLKE 220 +N++ + ++ + + H+ I++I++GGG F KD+ + + Sbjct: 194 KNRAINNYVQIIDKLFEIQHHYKLDIKYINIGGGFFGPVPPGMFGYATPSYKDYAEVIIA 253 Query: 221 FSEKYSVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274 +EPG ++ ++ T V D+ + + H+ + Sbjct: 254 KLHTNRWFCENRPCLVIEPGMSVAASSMAYITKVFDVKKRSNRWIAQVDGNMFHIRPSMH 313 Query: 275 YQESAT------IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + + N G +C+ D+ + V GD + ++V GY Sbjct: 314 TMKIPFQIISGRVIDNVETKRIDFAGSTCMESDVLVRTETCRQVHQGDFLEIDNVGGYTF 373 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 F +P IA+ + I +++++ Sbjct: 374 VMGANFIQF-LPHIAILKNNEFISLREGSNFDNFIE 408 >gi|159043924|ref|YP_001532718.1| ornithine decarboxylase [Dinoroseobacter shibae DFL 12] gi|157911684|gb|ABV93117.1| ornithine decarboxylase [Dinoroseobacter shibae DFL 12] Length = 398 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 109/354 (30%), Gaps = 22/354 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D ++ + G + A+K A + L G ++S E+ Sbjct: 40 PTLVLDCDAVVAKYHALAHGLGQ-GTLIHYAMKANPAPEILRALAAEGCGFDAASRGEIE 98 Query: 65 -LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 ++ K A +F ++ K A ++ LR+ Sbjct: 99 LALAAGATAARISFGNTIKRPSDIAFAHAHGIDLFAADAEAELDKIAAHAPGARVFLRVL 158 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + + + L+ + D+ GL FH + + +S L + Sbjct: 159 VGATGADWPLSRKFGCAPDTALRLMDRAAFLGLRPVGLSFHVGSQTRDPGMWSDTLDQMA 218 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFSEKYSVQIYL-EPGEA 236 + + + I++GGG D + ++ + EPG Sbjct: 219 EIWHAGRARGHDLNLINIGGGFPAFYGDPILEAETYAGRVGALVRARFGDATVMAEPGRG 278 Query: 237 IVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGPY 288 +V + VL +S ++ + S + + + + YQ Sbjct: 279 LVAEAGMIVAEVLLVSRKSEDDLCRWVYLDIGKFSGLAETMEEAIRYQFVTPHDGGETG- 337 Query: 289 TAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 ++ G SC + D+ E ++ GDRI + Y + FNG Sbjct: 338 PCIMAGPSCDSADVLYEQRPVHLPMALQSGDRILIKATGAYTTTYSSVGFNGFP 391 >gi|169860158|ref|XP_001836715.1| ornithine decarboxylase [Coprinopsis cinerea okayama7#130] gi|116502232|gb|EAU85127.1| ornithine decarboxylase [Coprinopsis cinerea okayama7#130] Length = 503 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 46/368 (12%), Positives = 104/368 (28%), Gaps = 38/368 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-- 63 +++ D ++ + ++ A+KC + L G +SL E+ Sbjct: 107 FFVADLSQVYRQHQRWITCLPE--IQPFYAVKCNPDPYVIRLLAALGAGFDCASLNEISS 164 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 +L + K S + +K K+ +RI Sbjct: 165 VLNVGGIDPSRIIFANPCKAVSFIRNASRMGVDTMTFDNADELYKVARSHPKAKLVVRIL 224 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S + K + +V G+ FH ++ + Sbjct: 225 TDDSKSLCAFGIKFGAPLNVVPSLLAKAKELNLDVVGVSFHVGSGCYDPSVYTDAIMRSR 284 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-KEFSEKYSVQIYLEPGEAIVT 239 F + +GGG + + + + F ++ +++ EPG V+ Sbjct: 285 TVFDMAKEAGYDFTLLDIGGGFEDALFEKAATVLREAIDRYFPDRKHIKMIAEPGRFYVS 344 Query: 240 NTTTLNTTVLDIS----------------------ENIKNLVIVDSSVEAHVPDYLLYQE 277 L ++ V + + D+ + Sbjct: 345 TAFKLAAHIIARRAPLEKDAAPATSGTAEEPDQPKVMYYINDGVYGAFNCILFDHQVIHP 404 Query: 278 S-------ATIYPNTGPYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNIN 329 + + + + V G +C + D + +++GD + F ++ Y + Sbjct: 405 YVLSMGGSFHVAESEPKHVSSVWGPTCDSIDCVSPKTVLPVNLQVGDWLGFNNMGAYTVC 464 Query: 330 RKNWFNGI 337 + FNG Sbjct: 465 AASQFNGF 472 >gi|237750793|ref|ZP_04581273.1| LOW QUALITY PROTEIN: carboxynorspermidine decarboxylase NspC [Helicobacter bilis ATCC 43879] gi|229373238|gb|EEO23629.1| LOW QUALITY PROTEIN: carboxynorspermidine decarboxylase NspC [Helicobacter bilis ATCC 43879] Length = 301 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 89/286 (31%), Positives = 134/286 (46%), Gaps = 36/286 (12%) Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIK---------N 157 IGLRINP S + +P P SRLG ++ + + Sbjct: 17 PQIHIGLRINPLYSEVSPPIYNPCIPKSRLGIIPSVFYRDLENLAKKYNYTDTLSFFKAH 76 Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 +GL FH +CE S L ++ FG +++ EW++ GGG H T DY Sbjct: 77 FSGLHFHTHCEQDS-SALQRTLPHVIGHFGDYLSHCEWVNFGGGHHITRSDYNCTLLVNL 135 Query: 218 LKEFSEKYS-VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276 +K+F EKY+ +Q+ LEPGEA+ T L V+DI EN + I+D S H+PD L Sbjct: 136 IKDFREKYNGIQVMLEPGEAVGWQTGDLIGEVVDIVENEGLVAILDVSASCHMPDCLEMP 195 Query: 277 ESATIYPN-----------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 Y G Y G +CLAGD+ G++ F+ P+K+GD+I+ Sbjct: 196 YRPACYKITKDSKGNAVIESDLGEEKGKYCYRFGGPTCLAGDVIGDYSFDMPLKVGDKIA 255 Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 F D+ Y I + FNG+ +P++ V +G K +++F Y D+ Sbjct: 256 FVDMIHYTIVKNTTFNGVELPSLGVV-ENGKFKLLKQFGYTDFKER 300 >gi|196013972|ref|XP_002116846.1| hypothetical protein TRIADDRAFT_31473 [Trichoplax adhaerens] gi|190580564|gb|EDV20646.1| hypothetical protein TRIADDRAFT_31473 [Trichoplax adhaerens] Length = 390 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 121/378 (32%), Gaps = 33/378 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL+D L+ T + + ++ A+KC + M TL + G +S E+ Sbjct: 12 PFYLVDISDLICKYKTWMSLLPR--IRPFYAMKCNPNFQMVATLCRLGAGLDVASAGEIE 69 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121 GE Y+ K V +N + F++ +L++ K + L Sbjct: 70 TAVALGLKGEDVIYSNTCKGISHLKVAANEGITQMTFDSEEELHRIKRILPNARLLLRLL 129 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 ++ S + K + + N+ G FH + +S ++ Sbjct: 130 VDDSGAQWKHGI--KAGAPFSRVSHLFKVAKKLGLNLVGTSFHVGSDCGDPSAYSKAIER 187 Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEP 233 K F ++ + +GGG + E + + +I EP Sbjct: 188 CRKAFDIAVSLGMELSMLDIGGGYPGHADTLFKNVGATSINEAIDIHFPSGCGVKIISEP 247 Query: 234 GEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHVPD----------YLLYQES 278 G+ +++ L ++ +++ + V H+ + Q Sbjct: 248 GKYFAMSSSILCANIIGKRLRYEDGDVQIEGVKALEVMYHISEGMGGSFLSVIATHQQYI 307 Query: 279 ATIYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 N + G SC A D ++ G+ + ++D+ Y + FNG Sbjct: 308 PKKLSNNNEKCYRSSLWGPSCTATDCLLSDFNLPEMETGEWVYYDDLGAYTSSTATNFNG 367 Query: 337 INMP-TIAVKNVDGTIKA 353 + + D Sbjct: 368 FKKAKSSYFISEDYWYDI 385 >gi|21281825|ref|NP_644911.1| hypothetical protein MW0096 [Staphylococcus aureus subsp. aureus MW2] gi|49485000|ref|YP_042221.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus MSSA476] gi|297209376|ref|ZP_06925774.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911376|ref|ZP_07128825.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH70] gi|21203260|dbj|BAB93961.1| putative diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MW2] gi|49243443|emb|CAG41864.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus MSSA476] gi|296885837|gb|EFH24772.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887555|gb|EFK82751.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH70] Length = 400 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITLSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225 K + ++ I+LGGGI + + + L E Sbjct: 200 DVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 V + E G IV + T VLDI + + Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319 Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G+ C D+F + GD I F+ Y + + Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379 Query: 333 W-FNGINMPTIAVKNVDGTIK 352 F P + Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400 >gi|207092889|ref|ZP_03240676.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori HPKX_438_AG0C1] Length = 251 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 79/224 (35%), Positives = 120/224 (53%), Gaps = 19/224 (8%) Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ 216 V+GL FH +CE L+++EK F ++ + W++ GGG H T DY V Q Sbjct: 20 GVSGLHFHTHCEQN-ADALCRTLEHVEKHFKPYLENMAWVNFGGGHHITRSDYNVNLLIQ 78 Query: 217 RLKEFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275 +K+F E+Y ++ LEPGEAI L +V+DI +N + + ++D+S AH+PD L Sbjct: 79 TIKDFKERYHNIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAVLDASFSAHMPDCLEM 138 Query: 276 QESATIYP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 +I N G ++ + G +CLAGD G F FE P+K GD+I Sbjct: 139 PYRPSILKVSAENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIV 198 Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 F+D+ Y I + N FNG+ +P++A + G K ++ FSY DY Sbjct: 199 FQDMLHYTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYK 241 >gi|2337850|emb|CAA61274.1| ornithine decarboxylase [Ustilago maydis] Length = 459 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 57/414 (13%), Positives = 111/414 (26%), Gaps = 65/414 (15%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ ++R + A+KC + L G +S E+ Sbjct: 44 FFVADLSEVYR--QHLRWMRALPRIVPFYAVKCNPDPYVLQLLGALGTGFDCASNGEIEA 101 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K + + + + K K K+ +RI Sbjct: 102 VLKLGINPARIIYANPSKAASFVRHAAGHNVGLTTFDNMDELEKMKRYHPSCKLVVRILT 161 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA--MLKNI 182 S S L + ++ +V G+ FH F Sbjct: 162 DDSKSACQLGLKFGAPIASVPRLLERARELELDVVGVSFHVGSGCYDPDSFRDAVYRACA 221 Query: 183 EKEFGHFITQIEWISLGGGIHFT-------------DKDYPVKDFCQRLKEFSEKYSVQI 229 + + + +GGG D +P +DF KE K + Sbjct: 222 FEMGKQAGFSFDLLDVGGGFGHDNFEMVAGVLGPAIDAYFPDEDFAPGGKEVVGKVNGLR 281 Query: 230 YL-EPGEAIVTNTTTLNTTVLDISENIKNLVIVD----------------------SSVE 266 + EPG V + L T ++ + + + + Sbjct: 282 IIAEPGRFYVHSAFALATNIIAVRRGEPSAAMDHVEATPKAQVMYYQNDGLYGSFNCVIF 341 Query: 267 AHVPDYLLYQESATIYPNTGP----------------------YTAMVCGRSCLAGDIFG 304 HV + + V G +C + D Sbjct: 342 DHVKFIQSSDAGPRVRVRADDWVARGASGECGRLALQQEAMTLESCSVWGPTCDSIDCVR 401 Query: 305 EFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTI-AVKNVDGTIKAIRE 356 + +++GD + +E++ Y I + FNGI I +R+ Sbjct: 402 DHVELPKGLQVGDWLVYENMGAYTICAASTFNGIRRSEIRYTLGHGQDADIVRQ 455 >gi|170099485|ref|XP_001880961.1| ornithine decarboxylase [Laccaria bicolor S238N-H82] gi|164644486|gb|EDR08736.1| ornithine decarboxylase [Laccaria bicolor S238N-H82] Length = 412 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 49/386 (12%), Positives = 114/386 (29%), Gaps = 41/386 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D + ++ A+KC + L G +S E+ Sbjct: 18 FFVADLSLVYYQHQRWKACLPE--IQPFYAVKCNPDPYIIRLLAALGTGFDCASNGEISQ 75 Query: 66 GH--EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + K +A D + F+ +L K + + + Sbjct: 76 VLNVGGIDPSRIIFANPCKAVSFVRNAAKMRVDMMTFDNSDELYKIARAHPRAKVIVRIL 135 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + S S F + + G K + +V G+ FH ++ + Sbjct: 136 TDDSKSLCAFGIKFGAPLVTVPGLLAK--AKELNLDVIGVSFHVGSGCYDPSVYTDAIMR 193 Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEAI 237 F + +GGG T + + ++++ ++ +++I EPG Sbjct: 194 ARAVFDMGKDAGYTFSLLDVGGGFEDTLFEQAAHYLNKAIEQYFPDRRNIKIIAEPGRFY 253 Query: 238 VTNTTTLNTTVLDIS--------------------ENIKNLVIVDSSVEAHVPDYLLYQE 277 V+ L ++ V + + D+ + Sbjct: 254 VSKAFRLAANIIARRAPIAGPPAQGPSESASDQPAVMYYINDGVYGAFNCILFDHQVIHP 313 Query: 278 S-------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329 I + + + V G +C + D +++GD + F+++ Y + Sbjct: 314 HVLSMNGSFHIADSEPSHLSSVWGPTCDSIDCVSPKTTLPVALQVGDWLGFDNMGAYTVC 373 Query: 330 RKNWFNGINMPTIAVKNVD-GTIKAI 354 + FNG + + G ++ Sbjct: 374 AASQFNGFELSNVIYTTGGVGAVEVR 399 >gi|294625584|ref|ZP_06704209.1| diaminopimelate decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600104|gb|EFF44216.1| diaminopimelate decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 398 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 52/373 (13%), Positives = 106/373 (28%), Gaps = 32/373 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D L + + + A +L A K A + TL ++DG ++S E+ Sbjct: 27 AYVYDLAALDRH-AAWMRAQLPAPCELFYAAKANAEPPILRTLAPHVDGFEAASGGELAW 85 Query: 66 GHEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 H + + D E+ + D + ++S+L + + A + + + + Sbjct: 86 LHAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHVESLSELERLAEVAAHAGRCVPVFLR 145 Query: 124 PS---VSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFL 173 + L +P G D + + + G FH + Sbjct: 146 MNIAVPGAQSTRLMMGGQPSP-FGLDPCDLHAAMQRLQASPSLRLTGFHFHLMSHQRDAT 204 Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225 ++ + + ++ GGG + FC L + Sbjct: 205 AQLHLIAAYLRIVQQWRHTYALGPLRVNAGGGFGVDYLAPDASFDWAGFCAGLPALLRDH 264 Query: 226 SV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 ++ LEPG + + VLD+ + + H + Sbjct: 265 GTDLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQGHDHPFRV 324 Query: 283 PNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335 + G+ C D+ + GD ++F Y N + F Sbjct: 325 LRGERAPVLRETPVTLVGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQQFL 384 Query: 336 GINMPTIAVKNVD 348 P Sbjct: 385 MHPPPQKVFLTEG 397 >gi|70724836|ref|YP_257046.1| LysA protein [Sodalis glossinidius] gi|85060454|ref|YP_456155.1| achromobactin biosynthetic and transport gene lysA [Sodalis glossinidius str. 'morsitans'] gi|68696955|emb|CAI59315.1| LysA protein [Sodalis glossinidius] gi|68697041|emb|CAI59488.1| LysA protein [Sodalis glossinidius] gi|84780974|dbj|BAE75750.1| achromobactin biosynthetic and transport gene lysA [Sodalis glossinidius str. 'morsitans'] Length = 401 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 109/364 (29%), Gaps = 31/364 (8%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 ++ D L ++ + + G +L A+K + + TL ++DG SS E+ Sbjct: 26 FIYDLAALQQHIRQVMEALPD-GAELYYAIKANSEPQILQTLAPWVDGFEISSGGEIERL 84 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + ++ A+ I +++++++ + A++ + + I Sbjct: 85 QAAGSDKPFVFSGPGKLDSDLRAALRRQAAAIHVESLNEIDRLQRLAREQGRVQTVLIRI 144 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---------VNGLMFHNNCENKSFLCF 175 + I + + + + + + G H +S Sbjct: 145 NPQLPAQISSRLAMAGTATPFGIDEADLAVAVHRVDNADHLVLQGFHVHAMSHQQSEQRH 204 Query: 176 SAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYS 226 +++ + + + I +++GGGI + FC L E + Sbjct: 205 RQLMEYYLQRWPQWKALSAQQEGITHLNVGGGIGVDYLSTSQFDWPGFCHWLGELLAVTA 264 Query: 227 VQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYP 283 L EPG I +LD + +V + I+ Sbjct: 265 GAPRLRFEPGRFISAFCGYYAIEILDQKTSHGKHFLVCRGGTHQFRLPVAQGHDHPIIHL 324 Query: 284 NTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNG 336 V G+ C D+ K V IGD + Y N + F Sbjct: 325 PQRSDGAGELCAWTVVGQLCTPKDVLSRDCSLKGVAIGDMLVLPLAGAYGYNISHADFLC 384 Query: 337 INMP 340 P Sbjct: 385 HPRP 388 >gi|282864989|ref|ZP_06274043.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE] gi|282560414|gb|EFB65962.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE] Length = 412 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 55/397 (13%), Positives = 103/397 (25%), Gaps = 40/397 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM---DGTTSSS 59 TP Y+ D ++ D + V + A K + + SS Sbjct: 12 GTPSYVYDLDRVAAARDELFAALPDE-VAVYYAAKANPHPEILREMRTGGPRVCRAEISS 70 Query: 60 LYEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + E+ + G Y K + +A+ T + L + A +L Sbjct: 71 VGELDAVLRAGYEGTEILYTGPGKTTEELAEAMARGVRTFSVESPGDLRHVGETAVRLGI 130 Query: 117 KIGLRINPSVSY--------SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 I + + + + L + + + GL F Sbjct: 131 TADCLIRVNNATGAAATSIRMTGVPSQFGFDGETLPGLAAELRDVPGTTLAGLHFFPLSN 190 Query: 169 NKS----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKE 220 K F + + LGGG + L Sbjct: 191 AKDEASLIAEFRHTIATASALQRELGVDFRIVDLGGGFAAPYAVQGDRPVYGELRDALAT 250 Query: 221 FSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273 +++ E G +V ++ TL T+V+++ ++ +V + Sbjct: 251 SLDEHFPGWREGAPRIACESGRYLVADSGTLLTSVVNVKDSRGTRYVVLDAGINTFGGMS 310 Query: 274 LYQESATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + A + G C GD+ G GD ++ + Y Sbjct: 311 GLGRILPVSVEPHESVGTDGVPAHLAGPLCTPGDLLGRQVPLSDPAPGDLLTVPNAGSYG 370 Query: 328 INRK-NWFNGINMPTIAVKNVDGTIKAIREF---SYN 360 F G P V D + R +Y Sbjct: 371 PTASLLMFLGRPAPAEIVVRGDDLVSVSRIEHTRTYE 407 >gi|270339902|ref|ZP_06006380.2| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270333376|gb|EFA44162.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 401 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 63/388 (16%), Positives = 137/388 (35%), Gaps = 25/388 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP +++D+++L + + + ++K A + S Sbjct: 12 LNTPCFVLDEKELKDCVSQFQLALSKQFAHSVVGYSVKTNALPYCLKVAKENGCFAEVVS 71 Query: 60 LYEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E L E F YN + + + T +++ D + + Sbjct: 72 FQEYELALEIGFDKRHIIYNGPLKSKETFLDAIQHDAIVNIETWREIDWLDDLPKDQKYE 131 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE--------KCKDKIESE-IKNVNGLMFHNNCE 168 IG+R+N + + A SR G K + I ++ + G+ H + Sbjct: 132 IGIRLNINTTAISKEDAFGENDDSRFGFSYESGDFKKAVELIRAKSHVRLVGIHTHKEPK 191 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEFSEKYSV 227 +S + ++ + Q+E+ +GGG P D+ + + E Sbjct: 192 TRSVRFYQRVIAYVLPILTTLHLQLEYWDVGGGFFGPMPGKPTFDDYARCFRTALEDSPY 251 Query: 228 ---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 ++ +EPG A++++ + +V+D+ ++ + V + ++ + Sbjct: 252 ANVRLVVEPGNALLSSPFSYVCSVIDVKQHDGRRFVTTDGTRNDVDPFFHKEDYFKRFVY 311 Query: 285 TGP-----YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGIN 338 T +V G +CL D + +GDR+ F+ V Y + F Sbjct: 312 TDTPQLCHQPQVVGGLTCLEYDRLFTLPEGAETLSVGDRVIFDRVGAYTMALTPLFIHY- 370 Query: 339 MPTIAVKNVDGTIKAIREF-SYNDYYNN 365 +PT+ +K DG IR+ +++ Sbjct: 371 LPTVYLKRNDGDYSIIRKEWGVSEFIRK 398 >gi|156392831|ref|XP_001636251.1| predicted protein [Nematostella vectensis] gi|156223352|gb|EDO44188.1| predicted protein [Nematostella vectensis] Length = 416 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 111/368 (30%), Gaps = 35/368 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D ++ L +++ V+ A+KC + L G +S E+ Sbjct: 40 FYIVDLADVV--LKHKKWVQLLPRVEPFYAMKCNNDPAVLKLLAGLGLGFDCASKGEIQT 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K S D + +++ K K ++ LRI Sbjct: 98 ILGLGVSPKKIVYANPCKQASHIKYASQHDVAMTTFDNEMELHKIKKLYPDAQLILRIRT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L + + NV G+ FH ++ + Sbjct: 158 DDSKSLCQLGIKFGAPLKQCRHLLKVAQDLGLNVVGVSFHVGSGCFDASAYATAVIAARS 217 Query: 185 EFG---HFITQIEWISLGGGIH-FTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLEPGE 235 F F + +GGG + ++ C + E++ I EPG Sbjct: 218 VFNLAVQFGFNCTLLDIGGGFPGDPNAAITFEEICTTINPLLEEHFPPSSGVRIIAEPGR 277 Query: 236 AIVTNTTTLNTTVLDIS----------------------ENIKNLVIVDSSVEAHVPDYL 273 +++ TL V V S + D+ Sbjct: 278 YYSSSSFTLAVNVYSRREVQSSSVLAEDVTAPENNGNQGFMYYVNDGVYGSFNCLIFDHA 337 Query: 274 LYQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + + P Y + G +C + D + V++G+ + F+ + Y + + Sbjct: 338 TVEAIPVKESSGQPLYQTSIWGPTCDSMDCITKNMMLPKVEVGEWLFFKYMGAYTQSAAS 397 Query: 333 WFNGINMP 340 FNG P Sbjct: 398 TFNGFKKP 405 >gi|169774753|ref|XP_001821844.1| ornithine decarboxylase [Aspergillus oryzae RIB40] gi|238496649|ref|XP_002379560.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357] gi|83769707|dbj|BAE59842.1| unnamed protein product [Aspergillus oryzae] gi|220694440|gb|EED50784.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357] Length = 425 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 111/363 (30%), Gaps = 38/363 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ ++D + N + VK A+KC + LN G +S E+ Sbjct: 52 PFCVMDLGYVYNEYQRWTSLL--PDVKPFYAVKCNPDTHIIKVLNAMNSGFDCASRNEME 109 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + E + K S + F+ ++L K + + ++ LR Sbjct: 110 LVMSQGVAPERIIFANPCKKISDLEYAQQSGVRKMTFDNEAELQKIRQR--FPDAQLILR 167 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 S + + L S K +S +V G+ FH K F ++N Sbjct: 168 CLASDPSATYSLGSKFGASSATSVKLLQCAKSWGLSVVGVSFHIGSNAKDPTAFDKAIQN 227 Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPG 234 + F + + +GGG + +++ KY +I EPG Sbjct: 228 SREVFDAGLRTGHDMHLLDIGGGF----SAHNFDAMASSIRQCIGKYFCGIDVEIVAEPG 283 Query: 235 EAIVTNTTTLNTTVLDISE---------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 TL ++ + N L + D + + + + Sbjct: 284 RYFAAGALTLACGIIGRRDAAANDEDKENRHMLYLNDGVYGTFICNIFEPGPQPKVLRAS 343 Query: 286 GP----------YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334 G + G +C D E + I D + F ++ Y+ F Sbjct: 344 GDFYPLDSEDEYERYTIWGPTCDGTDCVAESVALPKSLAIDDWLYFPEMGAYSTCLSTGF 403 Query: 335 NGI 337 NG Sbjct: 404 NGF 406 >gi|89053292|ref|YP_508743.1| ornithine decarboxylase [Jannaschia sp. CCS1] gi|88862841|gb|ABD53718.1| ornithine decarboxylase [Jannaschia sp. CCS1] Length = 389 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 112/364 (30%), Gaps = 28/364 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D ++ + D + A+K A + L G ++S E+ Sbjct: 31 PTLILDVDRVAQHYDALSAGLGQ--AHIHYAVKANPAPEILARLVTMGSGFDAASKVEIQ 88 Query: 65 LGHEKFGGETHA---YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + +H V A D + +L+K A I L Sbjct: 89 MCLDAGAAPSHISFGNTVKKPSDIAYAHSVGVDVFAADASEELDKIATHAPGAQVYIRLL 148 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAM 178 + S + + L + GL FH + + + Sbjct: 149 VEASGADWPLTRKFGTTKANALDLMAH--ARALGLRPVGLSFHVGSQTRDPAMWGPVLDG 206 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----VQIYLEP 233 + ++ ++ +++GGG D ++ ++ +I EP Sbjct: 207 IADVWTTAKTLGFPLDLLNIGGGFPAFYGDDIPHPTAYAANVMAQVHTRFGDVPRIMAEP 266 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNT 285 G +V + VL ++ + + S + + + + YQ AT + Sbjct: 267 GRGLVAEAGMIAAEVLLVARKSPDDLHRWVYLDIGKFSGLAETIDEAIRYQF-ATDRDHE 325 Query: 286 GPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPT 341 ++ G SC + D+ E +K GDRI + Y + FNG Sbjct: 326 AMGPCILAGPSCDSADVLYEKRPIALPLGLKSGDRIWIRNCGAYTTTYASIGFNGFPPLD 385 Query: 342 IAVK 345 + V Sbjct: 386 VVVL 389 >gi|323465202|gb|ADX77355.1| pyridoxal-dependent decarboxylase [Staphylococcus pseudintermedius ED99] Length = 400 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 46/379 (12%), Positives = 104/379 (27%), Gaps = 36/379 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 ++ D L +L+T + ++ A+K + + + + ++ G +S E+ Sbjct: 20 FIYDMDGLRQHLETVTSQLPD-NCEMYYAMKANSEFEILAAIQPHVAGFEVASEGEIAKA 78 Query: 67 HEKFGGE-THAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E D + + I ++ +L + ++ + + + + Sbjct: 79 LVHTTAEHVIFGGPGKTDESLRYAIQQGIRRIHVESLYELERLNALLKQENATMSILLRV 138 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN----KSF 172 + ++ G + G FH+ N Sbjct: 139 NLAGPFPAATLHMAGQPTQFGIDETEVDTVIATAQNMPRIQLEGFHFHSISNNLDAALHL 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQ 228 + + + ++ +++GGGI + + F L E+ +Q Sbjct: 199 QVMTLYFQKAKAWAAQHDFTLQHLNVGGGIGVNYADLNEQFDWTYFTTELSALIEEEGLQ 258 Query: 229 IY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 E G +V + T VLDI + H + Sbjct: 259 NITINFECGRYMVAHIGYYVTEVLDIKRVHGAWFAILKGGTQHFRLPVSWQHNHPFEILS 318 Query: 285 TGP------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 G G+ C D+F + + GD + F Y + + Sbjct: 319 LGEQANQIAPRTIEQQAVTFVGQLCTPKDVFAKAVEIPALSTGDAVIFIYAGAYGWSISH 378 Query: 333 W-FNGINMPTIAVKNVDGT 350 F P + + Sbjct: 379 HDFLSHPHPQCIYWSSEKE 397 >gi|294633870|ref|ZP_06712427.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces sp. e14] gi|292830122|gb|EFF88474.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces sp. e14] Length = 459 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 58/392 (14%), Positives = 110/392 (28%), Gaps = 38/392 (9%) Query: 9 IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 ID + + ++ V A+K + + L + G +S E+ L Sbjct: 45 IDVRGVRESVAGLHAAFTRVPDVLHTFAVKACSLVPVLRLLRETGMGCEVASPGELRLAL 104 Query: 68 -EKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKIGLRINP 124 F E A EI L+ + + + +L++ +GLR+NP Sbjct: 105 DAGFPPERIVLDAPAKTRQEIAQALTLGVALNADNLDELDRIDALRPPGCASVLGLRVNP 164 Query: 125 SVSYSKFILADPNRPFSRLGEKC-----KDKIESEI---KNVNGLMFHNNCENKSFLCFS 176 V S+ G ++++ + L H + + Sbjct: 165 QVGGGSIEAMSTATRHSKFGVALGDPGPRERVVEAFVRRPWLTRLHAHVGSQGCPLPLIA 224 Query: 177 AMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFSEK 224 L + Q+ + LGGG+ D + Sbjct: 225 EGLAATYRLAEEINERAGRRQVGSLDLGGGLPVNFADDRTLPTYADYVAALDAAEPGLLG 284 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA------HVPDYLLYQES 278 +I E G +++ + V + + V + + +P + S Sbjct: 285 GRYRIVTEFGRSLLAKNGFVAAVVEYVKDAGGRRVALTHAGAHIATRTVFMPAAWPLRAS 344 Query: 279 ATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 A V G C AGD+ + GD + D Y + + Sbjct: 345 AYGPDGGPKRAPVLRQDVAGPCCFAGDVVAHDRALPELAEGDLVVLHDTGAYYFSTPWAY 404 Query: 335 NGINMPTIA-VKNVDGTIK---AIREFSYNDY 362 N + P + DG I R + + Sbjct: 405 NSLPRPAVYGCAEADGRIVFATVRRAQTLREI 436 >gi|299143415|ref|ZP_07036495.1| putative Orn/DAP/Arg decarboxylase 2 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517900|gb|EFI41639.1| putative Orn/DAP/Arg decarboxylase 2 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 404 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 130/392 (33%), Gaps = 50/392 (12%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +YL D+ + VK L ++KC + + ++ G ++SL EV++ Sbjct: 17 FYLYDENIIDEYTGRLKRNF--PKVKFLYSVKCNSNSLVVKSVFSRGFGADAASLNEVLM 74 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + Y+ K TII +++ ++ K ++ A+K++ + + + Sbjct: 75 AEENGLSKDEIYYSAPGKSEYDIREAVKKSTIIADSIGEIKKLQNIAEKMNIVLDIGVRI 134 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSFLCFSAM 178 + +F + S+ G + E + N+ G+ H + + Sbjct: 135 NP---EFSFDSFDGKPSKFGIDEEQLFEYIKNNELKNINIVGIHVHIKSQELKIENLISY 191 Query: 179 LKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY--------- 225 + + F T +++I++G GI +RL E + Sbjct: 192 YEKMFNLAERFRKILNTDLKFINMGSGIGIQFSPKDKPLDIERLGEEFNRNLEIFLEEYP 251 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL-----YQESA 279 + ++++E G + T V+D + ++ +++ + ++ + Sbjct: 252 NTKVFIEVGRYATGKSGRYITKVMDKKISYGKTYVILKNTLNGFLRPAVIKMVEKFTTEP 311 Query: 280 TIYPNTGPYTA------------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 + +T + G C A D+ E ++ D + Sbjct: 312 DLICWEPLFTCSDAFEIRPLKDSSQLEKVTLVGNLCTATDVILEDVTMPKLECEDLVEIT 371 Query: 322 DVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352 + Y F+ P VDG I Sbjct: 372 NAGAYAAVLSPMQFSSQEKPAELFLTVDGRIL 403 >gi|224368176|ref|YP_002602339.1| LysA3 [Desulfobacterium autotrophicum HRM2] gi|223690892|gb|ACN14175.1| LysA3 [Desulfobacterium autotrophicum HRM2] Length = 416 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 61/394 (15%), Positives = 128/394 (32%), Gaps = 53/394 (13%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D++K+ + + L + L ++K + + G ++S EV+ Sbjct: 19 FYIYDEKKISSQIQILLENF--PQFEFLYSIKTNPFPPIVKFVASKGFGADAASAQEVIT 76 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G E Y+ K + + II ++ ++L AQ+ + + + Sbjct: 77 GQKAGMPYEKILYSSPGKTSKDIERTIDKAMIIADSYNELVLINSVAQQKNIHKKVGLRI 136 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSF----L 173 ++ F + S+ G ++ + + G+ H C+ Sbjct: 137 NID---FSMDGEKGTSSKFGVDENTLVKQKEFLNGFSNIKIVGIHVHLRCQILDHGKICR 193 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---------KDFCQRLKEFSEK 224 + +++ ++E+I+LGGG+ D ++ F++K Sbjct: 194 YYERIIELGLFCKETLGWEMEFINLGGGLGIVYSLINDTPLDIEKLSCDCQGLIQRFNDK 253 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYL---LYQESAT 280 V++ +E G I T ++DI E+ +IV+ + + L + Sbjct: 254 LKVRLIIETGRFITCEAGRYVTRIVDIKESLGTKYLIVEKGLNGFSRPSIAELLMDYTPE 313 Query: 281 IYPNTGPYT----------------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 + G C A DI + KIGD + Sbjct: 314 NSNLKASEPLFTTKDAFEFIIPEGDTFDHEKVSIVGSLCTATDILVKDAMLPKAKIGDIV 373 Query: 319 SFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTI 351 Y+ + F+ +P N DG I Sbjct: 374 IVSKAGSYSYSLSPILFSSFCLPFQFYLNSDGEI 407 >gi|302820900|ref|XP_002992115.1| hypothetical protein SELMODRAFT_236454 [Selaginella moellendorffii] gi|300140041|gb|EFJ06770.1| hypothetical protein SELMODRAFT_236454 [Selaginella moellendorffii] Length = 378 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 99/349 (28%), Gaps = 16/349 (4%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D + A+KC + L G +S E+ Sbjct: 18 FYVLDLATVTRLWKIWKSAMPRVN--PFYAVKCNPDPQLLSMLAALGAGFDVASKAELEA 75 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + K + + S+ +K K ++ LR Sbjct: 76 VTQLGVAPRNIIFANPCKLPSHITEAAKAGVVYTTFDSEGELYKLKKYHPQAEVLLRFRS 135 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + ++ L + ++ V G+ FH F+ +K K Sbjct: 136 DDTGARCPLGVKYGAEWDECYHLLEVAKTLGIKVAGVAFHVGSGASDVNAFAEGIKAARK 195 Query: 185 EFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQR-LKEFSEKYSVQIYLEPGEAIVT 239 F + ++ + +GGG + E++ + I Sbjct: 196 LFDMAESLGLPRMTMLDIGGGFVSDGGAGVKFAAAAYEIGNALEEHFPLETMADVRIIGE 255 Query: 240 NTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--YTAM 291 + + + VE + D + + +Y + + ++ Sbjct: 256 PGRFFAEEAFSLAALVFGCRVRRREEGNKTVVEYWINDGIYGSMNCLLYDHATLSLHPSI 315 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G +C D + ++ GD + F + Y + + FNG +P Sbjct: 316 IFGPTCDGLDTVLSDVWLPRLQCGDWLVFPRMGAYTKSAGSSFNGFAVP 364 >gi|123388346|ref|XP_001299560.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] gi|121880433|gb|EAX86630.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] Length = 396 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 119/367 (32%), Gaps = 26/367 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + L V + A+KC + L G +S EV Sbjct: 33 FWVADFNRVRHCLALWEENLNR--VHIHYAMKCCDEPELLKFLADRGVGYDCASQDEVQR 90 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + K A +++++ +L K ++ LRI Sbjct: 91 ILALGVDANRIVFAHPIKSIASIKYAKEHGVTRLVYDSEEELRKI--LRYYPEAEVFLRI 148 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC---ENKSFLCFSAML 179 P +++K L++ + K N G FH + +F + Sbjct: 149 KPRFTHAKIQLSNKFGADPKDVPKLMQLASELGANFIGFSFHVGSLCDDITTFRVALEYV 208 Query: 180 KNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEP 233 ++ + + ++ +GGG Y + + + ++ + EP Sbjct: 209 AELKAKAEQIGLNVSFVDIGGGFLPPSVKAKYTFAEIAEAINTAIDELFDGDEIEFLAEP 268 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL-----YQESATIYPNTGP- 287 G I ++ L V+ + ++ ++ + + + E + G Sbjct: 269 GRFIASDFMDLVIPVISVKDHHEDGEEQSVFMAEGIYGAFNALNYDHAEPHFLIRTEGAA 328 Query: 288 ----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + G++C + D+ E +++GD ++ E Y + ++FNG + Sbjct: 329 DGERVKTTLWGQTCDSADLVYEELLWPRLEVGDYLTIEKFGAYTYSPTSFFNGFPHHKVF 388 Query: 344 VKNVDGT 350 N + Sbjct: 389 HINEEDK 395 >gi|85099297|ref|XP_960749.1| ornithine decarboxylase [Neurospora crassa OR74A] gi|118381|sp|P27121|DCOR_NEUCR RecName: Full=Ornithine decarboxylase; Short=ODC gi|168854|gb|AAA33604.1| ornithine decarboxylase [Neurospora crassa] gi|168856|gb|AAA33605.1| ornithine decarboxylase [Neurospora crassa] gi|293958|gb|AAA33614.1| ornithine decarboxylase [Neurospora crassa] gi|28922270|gb|EAA31513.1| ornithine decarboxylase [Neurospora crassa OR74A] gi|38566814|emb|CAE76122.1| ornithine decarboxylase [Neurospora crassa] Length = 484 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 55/383 (14%), Positives = 101/383 (26%), Gaps = 55/383 (14%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + VK A+KC + L G +S E+ Sbjct: 85 FFVADLGEVYR--QHLRWKLNLPRVKPFYAVKCHPDERLLQLLAALGTGFDCASKAEIEQ 142 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 Y K + F+ +L K + + Sbjct: 143 VLRMGVDPSRIIYAQPCKTNSYLRYVAQQGVRQMTFDNADELRKIARLYPDAELFLRILT 202 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S S +F + S G NV G+ FH F +++ Sbjct: 203 DDSSSLCRFSMKFGASLDSTDG--LLGLARQLGLNVVGVSFHVGSGASDPTAFLKAVQDA 260 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237 F + ++ + +GGG D + + + F V + EPG Sbjct: 261 HVVFQQAAAYGYSLKTLDVGGGFCSDDSFEQMANVLRAALDEYFPAHTGVNLIAEPGRYY 320 Query: 238 VTNTTTLNTTVLD--------------------------------ISENIKNLVIVDSSV 265 ++ TL ++ + N S + Sbjct: 321 ASSAFTLACNIIARRTIQDGSAVSVSDSSSMSDDGSVNNGDARYMVYVNDGLYGNFSSIM 380 Query: 266 EAHVPDY----------LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKI 314 H + +A + G +C D E + + + Sbjct: 381 FDHQHPVAKILRAGGRTMYNSVAAHESSAEDAIEYSIWGPTCDGIDRITESIRFREILDV 440 Query: 315 GDRISFEDVAGYNINRKNWFNGI 337 GD + FED+ Y FNG Sbjct: 441 GDWLYFEDMGAYTKCSATTFNGF 463 >gi|268558706|ref|XP_002637344.1| C. briggsae CBR-ODC-1 protein [Caenorhabditis briggsae] gi|187024308|emb|CAP36352.1| CBR-ODC-1 protein [Caenorhabditis briggsae AF16] Length = 423 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 108/364 (29%), Gaps = 31/364 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + L+D K++ + + ++ A+KC + L G +S E+ + Sbjct: 42 FMLVDLDKIIERFNLWKR--ELPMIEPFYAVKCNTDVVLIRVLASLGCGFDCASREEIDI 99 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + Y K D + + K + ++ LRI Sbjct: 100 VMETGVSADRLIYANPCKTRSFIVHALERDVRMMTFDNAEELIKIGKLHPNAEMILRIAV 159 Query: 125 SVSYSKFILADPNRPFSRLG-EKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S + L L + E NV G+ FH + L + + Sbjct: 160 SDPTATCPLNLKFGADPVLAAPQLLKLAHEEGVNVVGISFHVGSGCNDATAYRTALSHAK 219 Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQ-----RLKEFSEKYSVQIYLEPGE 235 + +++ I +GGG + + + L EF + ++ EPG Sbjct: 220 NLCEIGEGYGFKMDIIDMGGGFPGAEHAHNPFEKIAETIRDALDEFFPETDKRLIAEPGR 279 Query: 236 AIVTNTTTLNTTVLDIS------------------ENIKNLVIVDSSVEAHVPD-YLLYQ 276 +L ++ + V S + D Sbjct: 280 FFAAEPFSLVANIIHATEVPASKITKDPKDSAEHGYMYYINEGVYGSFNCILFDHAHPIG 339 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 Y + + G +C + D+ + ++IG+ + + D+ Y + FNG Sbjct: 340 GPLFDVDRNEKYMSTIWGPTCDSLDLVEDKKLMVKMEIGEWMYYPDMGAYTLAAATTFNG 399 Query: 337 INMP 340 P Sbjct: 400 FAKP 403 >gi|302546570|ref|ZP_07298912.1| pyridoxal-dependent decarboxylase [Streptomyces hygroscopicus ATCC 53653] gi|302464188|gb|EFL27281.1| pyridoxal-dependent decarboxylase [Streptomyces himastatinicus ATCC 53653] Length = 396 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 51/368 (13%), Positives = 98/368 (26%), Gaps = 33/368 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D L + V+L A K + L Y+ G +S E+ Sbjct: 23 PAYIYDLTALDAHAREIRDALP-PHVELYYAAKANPEPPVLRALAPYVTGYEVASGGELA 81 Query: 65 LGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-IGLR 121 E A+ K A+ + + +L A + + + Sbjct: 82 HVREAVPERPLAFGGPGKTETELRRALELGVERFHVESEHELRLLSSLADRPVDVLLRVN 141 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLC 174 + + S G + G+ H + Sbjct: 142 LPLTDEALGGAALAMGGRPSPFGLDPDRVERCLPLFTPDGPLRLRGIHAHLASGLDAPDQ 201 Query: 175 FSA---MLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV 227 + + + + +++GGG+ + K + + L +++ Sbjct: 202 TAVAAGIADWTRELSDRHGLDLTEVNVGGGMGVDYLRPDTRFDWKAYGEGLAGVADRNPG 261 Query: 228 QIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESA------ 279 +EPG A+ T VLD+ + V H+ + Sbjct: 262 LTLRIEPGRALTAYCGWYVTEVLDLKHSRGEAFAVLRGGTHHLRTPAAKAHDHPFQVLPA 321 Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 P + G+ C D+ ++ GDRI+F Y N + Sbjct: 322 ADWDRDWPRPTASGEPVTLVGQLCTPKDVLARGVPVAELRAGDRIAFAMAGAYAWNISHH 381 Query: 334 -FNGINMP 340 F P Sbjct: 382 DFLMHPKP 389 >gi|298374798|ref|ZP_06984756.1| pyridoxal-dependent decarboxylase [Bacteroides sp. 3_1_19] gi|298269166|gb|EFI10821.1| pyridoxal-dependent decarboxylase [Bacteroides sp. 3_1_19] Length = 407 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 66/395 (16%), Positives = 134/395 (33%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP+YL D++ ++N I K +L + K + + S Sbjct: 13 GTPFYLFDEKGFIDNYRKLEGIFKAIYPNYQLSYSYKTNYTPFVCQLVRSLGGYAEVVSD 72 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH---K 116 E L + + + YN K E+ L + + +++ + + + Sbjct: 73 MEYTLAKKLGYDNKQIVYNGPSKGEEMFDHLEHQGILNIDSLDEAKRIVSYVKGHPDRNY 132 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 +G+RIN V L E E+ N+ GL H ++ ++ Sbjct: 133 TVGIRINMHVGGDFISRFGLVPESKELQETVSLIKETVNLNLIGLHCHI-SRSRGVEAWT 191 Query: 177 AMLKNIEKEFGHF-----------------ITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219 + + K + + + GG T +DY Sbjct: 192 KRTEIMLKAADDYIDGVPAYISLGSGMYADMPEFLKQQFGGDTVPTYEDYADCTIQPFAD 251 Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + + + ++ EPG +V + T VL + E + ++ + ++ Sbjct: 252 HYKDVENQPILFTEPGTTVVARYLSFVTKVLSVKEVRGRYIANMDGDYHNLGEICTMKKL 311 Query: 279 ATIYPNTGPYTA-----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G + G +CL D+ FE+ + GD + F++V GY+I K Sbjct: 312 PVTVLSGGKEQHTYTNMDIMGFTCLEQDVLYPG-FEQSIAEGDILVFDNVGGYSIVSKPQ 370 Query: 334 FNGINMPTIAVKNVDGTIK-AIREFSYNDYYNNLS 367 F + V +G ++ +R +++D +N S Sbjct: 371 FI-KPQSAMYVLRTNGEVEQIMRAETFDDVFNKFS 404 >gi|150010400|ref|YP_001305143.1| diaminopimelate decarboxylase [Parabacteroides distasonis ATCC 8503] gi|149938824|gb|ABR45521.1| diaminopimelate decarboxylase [Parabacteroides distasonis ATCC 8503] Length = 407 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 66/395 (16%), Positives = 134/395 (33%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP+YL D++ ++N I K +L + K + + S Sbjct: 13 GTPFYLFDEKGFIDNYRKLEGIFKAIYPNYQLSYSYKTNYTPFVCQLVRSLGGYAEVVSD 72 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH---K 116 E L + + + YN K E+ L + + +++ + + + Sbjct: 73 MEYTLAKKLGYDNKQIVYNGPSKGEEMFDHLEHQGILNIDSLDEAKRIISYVKGHPDRNY 132 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 +G+RIN V L E E+ N+ GL H ++ ++ Sbjct: 133 TVGIRINMHVGGDFISRFGLVPESKELQETVSLIKETVNLNLIGLHCHI-SRSRGVEAWT 191 Query: 177 AMLKNIEKEFGHF-----------------ITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219 + + K + + + GG T +DY Sbjct: 192 KRTEIMLKAADDYIDGVPAYISLGSGMYADMPEFLKQQFGGDTVPTYEDYADCTIQPFAD 251 Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 + + + ++ EPG +V + T VL + E + ++ + ++ Sbjct: 252 HYKDVENQPILFTEPGTTVVARYLSFVTKVLSVKEVRGRYIANMDGDYHNLGEICTMKKL 311 Query: 279 ATIYPNTGPYTA-----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + G + G +CL D+ FE+ + GD + F++V GY+I K Sbjct: 312 PVTVLSGGKEQHTYTNMDIMGFTCLEQDVLYPG-FEQSIAEGDILVFDNVGGYSIVSKPQ 370 Query: 334 FNGINMPTIAVKNVDGTIK-AIREFSYNDYYNNLS 367 F + V +G ++ +R +++D +N S Sbjct: 371 FI-KPQSAMYVLRTNGEVEQIMRAETFDDVFNKFS 404 >gi|55978166|gb|AAV68704.1| LolD-1 [Neotyphodium uncinatum] Length = 420 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 98/364 (26%), Gaps = 36/364 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ V A+K + TL G +S+ E+ L Sbjct: 33 FFVADLNDIVRKWAAWKKAL--PDVTPFFAVKSSYDRRLIQTLATCGAGFDCASVEEIEL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122 G E + K + I F+ +L K + LR+ Sbjct: 91 ILSLGIGAERIVFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHH--HYPEAQTVLRV 148 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH----NNCENKSFLCFSAM 178 + L + ++ + G FH + +++ Sbjct: 149 FADDPTNADPLGTKFGAAREDIDGLVRLVKELNMKLAGASFHAAPSVAVDAAAYVRGIRD 208 Query: 179 LKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + + +GGG + K + ++I EPG Sbjct: 209 AAEVFARARRVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFKSQVVEGRLRILAEPG 268 Query: 235 EAIVTNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQ- 276 + L V L I++ I + ++ V + + Sbjct: 269 TLFSCSPFYLAVKVVARRRNAAAFGNEPATRLYINDGIYSNFMMRFIVNMTFSPVAVIRK 328 Query: 277 --ESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNW 333 + GRSC + D + V +GD + F+D+ Y Sbjct: 329 GVWYDQTEQTMRREACSLWGRSCDSNDCINRDCRLDPEVGVGDWLVFKDMGAYTTVCNTT 388 Query: 334 FNGI 337 FNG Sbjct: 389 FNGF 392 >gi|251787749|ref|YP_003002470.1| Orn/DAP/Arg decarboxylase 2 [Dickeya zeae Ech1591] gi|247536370|gb|ACT04991.1| Orn/DAP/Arg decarboxylase 2 [Dickeya zeae Ech1591] Length = 440 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 53/391 (13%), Positives = 107/391 (27%), Gaps = 35/391 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+Y+ ++ L LY + A + +LK + TL + G S Sbjct: 32 IGTPFYVYSTRQ-LRRQLQQLYQQLPADTAVYYSLKANPNLSVVKTLVEQGAGCEVCSPA 90 Query: 62 EVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y K A+ I+ +V++L A + Sbjct: 91 ELDTALAAGVLPQHILYVGPGKSVPALARAIDCGIRAIVVESVAELETINRLAAQAGTIQ 150 Query: 119 GLRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170 + + + S+ + ++ G + G + Sbjct: 151 TVALRINPDFSSEHARLVMSGKPTQFGMTLDTLQTVLPCLHRWPAVALRGFHVYLGTRIL 210 Query: 171 S----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFS 222 + +L+ +++I +GGG + + + Sbjct: 211 NAQAIADNTRNILQMALNLRDQHQLALDFIDVGGGFGVPYFPKETPLDLPSLGEAMAPVM 270 Query: 223 EKYSV-----QIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAH-------- 268 + QI +E G +V T V ++ K I D H Sbjct: 271 ADFRRQAATTQIIIELGRYLVAEAGLFVTRVNNLKTAGGKTFAICDGGANCHSAAAGLNS 330 Query: 269 VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + + V G C D+ G+ +++ D I Y + Sbjct: 331 MLRKNFPLLRVGDNQSRPLQPYQVSGPLCTPTDLLGDNVLLPMLEVNDLIGITHSGAYGL 390 Query: 329 NRKNW-FNGINMPTIAVKNVDGTIKAIREFS 358 F P A+ + I+ + + Sbjct: 391 TASPGAFLSFGYPAEAMVDGRRLIQIRQPET 421 >gi|332184842|gb|AEE27096.1| Diaminopimelate decarboxylase [Francisella cf. novicida 3523] Length = 403 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 55/380 (14%), Positives = 113/380 (29%), Gaps = 33/380 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D L + + VKL ALK + ++ +S+ E+ Sbjct: 20 PFFYYDLDMLEAHAKELQKL----PVKLWYALKANPLSRIIKVFDEQKIRFDVASIGELD 75 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKA--QKLHKKIG 119 + + K + +++Q D ++ ++ Sbjct: 76 QVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSDLVEKNNINVEVL 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171 LR+ + + + R + G D + S ++ G+ Sbjct: 136 LRVQLMWNDQESNVLGGGRCVTPFGLSINDWKDFFNSTPSISNNMSIIGMHCFQWGNILC 195 Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 S + K I K ++ I LGGGI L ++ Sbjct: 196 LDKLSQIWKTITKALLGLSEAINVSLKVIDLGGGIGVPYNASQKSVSINDLISCFDELKK 255 Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATI 281 +++ +LE G V + T V+D ++V H+ L + Sbjct: 256 EFPNIEYWLELGRYAVAESGVYLTKVVDRKSVNNINLLVTDGGAHHLVRPALTGESFPID 315 Query: 282 YPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 + + G C + D G + K + + D + F+ Y F Sbjct: 316 LLREKSCSERGDFQIHGPLCTSLDKSGTVNLPKDIGLNDYLIFKQTGAYGFTESMPFFLC 375 Query: 337 INMPTIAVKNVDGTIKAIRE 356 N+P + G ++ +R+ Sbjct: 376 HNLPAEIIFYK-GQLQTVRQ 394 >gi|149921405|ref|ZP_01909858.1| putative lysine/ornithine decarboxylase [Plesiocystis pacifica SIR-1] gi|149817725|gb|EDM77190.1| putative lysine/ornithine decarboxylase [Plesiocystis pacifica SIR-1] Length = 430 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 100/360 (27%), Gaps = 23/360 (6%) Query: 10 DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68 D +L +A+K + + L G ++S EV L Sbjct: 45 DLDRLEARYADLCAAFP-PDTLHAVAIKANPVVALLEVLVDAGAGLEAASWEEVQLALAA 103 Query: 69 KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI---GLRINP 124 E + + A D E+ A L + + +L + + + GLR+NP Sbjct: 104 GCPSERVVFDSPAKTDAELAASLELGLWLNVDHPDELRRIEALLAERPPTRARVGLRVNP 163 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + S+ G D + H + ++ Sbjct: 164 QLGSGAIEFTSTISKASKFGVPLTDAPALVRRFPFITGLHVHTGSQGVGLPLLQAAARAT 223 Query: 185 EFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 ++W+ +GGG+ + D+ + L + ++ E G +I Sbjct: 224 AEVAEALALDWLDVGGGVPVRYTDADPEPPSYADWGRALADIPGWGQRRLVTEVGRSIHA 283 Query: 240 NTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT-----------IYPNTGP 287 +TV + + I+ + + Q+ G Sbjct: 284 GCGWAVSTVEAVKDVDGKPTLIIHLGADFLMRRVYRPQDWDHEFIVLDPEGRPRAHGEGA 343 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 + + G C +GD+ P GD + D Y + + +P Sbjct: 344 RESQIAGPLCFSGDMLSRGRSLPPAARGDWLLVRDCGAYTLGMWSRHCSRGLPPTYGYRR 403 >gi|294666035|ref|ZP_06731296.1| diaminopimelate decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604175|gb|EFF47565.1| diaminopimelate decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 398 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 52/373 (13%), Positives = 106/373 (28%), Gaps = 32/373 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D L + + + A +L A K A + TL ++DG ++S E+ Sbjct: 27 AYVYDLAALDRH-AAWMRAQLPAQCELFYAAKANAEPPILRTLAPHVDGFEAASGGELAW 85 Query: 66 GHEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 H + + D E+ + D + ++S+L + + A + + + + Sbjct: 86 LHAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHVESLSELERLVEVAAHAGRCVPVFLR 145 Query: 124 PS---VSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFL 173 + L +P G D + + + G FH + Sbjct: 146 MNIAVPGAQSTRLMMGGQPSP-FGLDPCDLHAAMQRLQASPSLRLTGFHFHLMSHQRDAT 204 Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225 ++ + + ++ GGG + FC L + Sbjct: 205 AQLHLIAAYLRIVQQWRHTYALGPLRVNAGGGFGVDYLAPDASFDWAGFCAGLPALLRDH 264 Query: 226 SV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 ++ LEPG + + VLD+ + + H + Sbjct: 265 GTDLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQGHDHPFRV 324 Query: 283 PNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335 + G+ C D+ + GD ++F Y N + F Sbjct: 325 LRGERAPVLRETPVTLVGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQQFL 384 Query: 336 GINMPTIAVKNVD 348 P Sbjct: 385 MHPPPQKVFLTEG 397 >gi|114331720|ref|YP_747942.1| diaminopimelate decarboxylase [Nitrosomonas eutropha C91] gi|114308734|gb|ABI59977.1| Diaminopimelate decarboxylase [Nitrosomonas eutropha C91] Length = 400 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 110/356 (30%), Gaps = 36/356 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 YL D L ++ + V A+K + + L +++DG +SS E+ Sbjct: 24 AYLYDLGALASHARNIKSSLPDR-VNFFYAIKANSDLPILSALAEHVDGFEASSGGEIQW 82 Query: 66 GHEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRI 122 + F ++ D E++ + N T+ + +L + A+ + I LR+ Sbjct: 83 VRQNFPDVPLIFSGPGKLDTELELAILNNVTVHIESRFELERLLHIARHYQQPAEILLRV 142 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCEN----K 170 NP + ++ G + S+ G FH + Sbjct: 143 NPHFEDLRATSLMMGGKPTQFGISVEHLSDCLKMVRDNSDCLYFQGFHFHLLSHQLDAAQ 202 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------- 223 SA ++ K F I+ I++GGGI KD + Sbjct: 203 HLRLLSAYIEQAVKWKEEFNLVIDHINVGGGIGVNYKDIDQQFDWCHFSHGLNNLLIGAA 262 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESAT-- 280 K +I E G + V+DI + +V H Y Sbjct: 263 KNIPKIRFEMGRYVSAFCGVYVAEVIDIKTSGNGTYVVVKGGTHHFRTPYAQNHSHPFKV 322 Query: 281 --IYPNTGPY--------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + PY + G+ C D+ +++GD + F Y Sbjct: 323 IPVSTWKKPYSRPGLRHGKVNIVGQLCTPKDLLAFDEMVGEIRVGDIVLFSHAGAY 378 >gi|71068208|gb|AAZ23063.1| probable decarboxylase [Streptomyces fradiae] Length = 470 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 54/392 (13%), Positives = 109/392 (27%), Gaps = 38/392 (9%) Query: 9 IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 +D + + + V A K + + L + G +S E+ L Sbjct: 49 LDVDHIRQQVASLRAAFAGAPDVLHTFAAKAASLVPVLRLLAEDGMGCEVASPGELRLAL 108 Query: 68 -EKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKIGLRINP 124 F + + A EI L + + + +L + IGLR+NP Sbjct: 109 DAGFPPDRIVLDSPAKTRSEIAEALRLGVAVNADNLDELERIDALRPPGCSSVIGLRVNP 168 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCENKSFLCFS 176 V S+ G +D+ + + GL H + + Sbjct: 169 QVGGGAIGAMSTATATSKFGVALRDEGARERVVEAFARRPWLTGLHAHVGSQGCPLELIA 228 Query: 177 AMLKNIEKEFGHFI-----TQIEWISLGGGIHFT------DKDYPVKDFC-QRLKEFSEK 224 + + Q+ + +GGG+ Y + Sbjct: 229 EGIAATHRLAEEINAVLGRRQVTGLDIGGGLPVNFTDDTVRPTYQDYTAALRTAVPGLFD 288 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPDYLLYQES 278 + E G +++ + + V + + + ++ A +PD + Sbjct: 289 GRYALVTEFGRSLLAKSGFIAARVEYVKEAGGRRIAVTHAGAQTATRTALMPDAWPLRVG 348 Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 A T V G C AGD+ ++ GD + D Y + + Sbjct: 349 AFDAEGHPKQTPPRVQDVAGPCCFAGDVVATGRELPLLEEGDHVVLYDTGAYYFSTPWAY 408 Query: 335 NGINMPTIAVKNVDGTIK----AIREFSYNDY 362 N + + DG + ++ Sbjct: 409 NSLPRVGVHGYRTDGAQVRSAPVRDPQTLDEI 440 >gi|302867092|ref|YP_003835729.1| Orn/DAP/Arg decarboxylase 2 [Micromonospora aurantiaca ATCC 27029] gi|302569951|gb|ADL46153.1| Orn/DAP/Arg decarboxylase 2 [Micromonospora aurantiaca ATCC 27029] Length = 415 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 105/389 (26%), Gaps = 37/389 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y D ++ + T + +L +LK + L+ S E Sbjct: 7 DTPAYRYDLARVRASHATLVAALPAP-SRLFYSLKANPHPALVAALHTAGCDAEICSPGE 65 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118 + G+ Y K AV + ++ + L++ A ++ Sbjct: 66 LAAALRAGVPGDRMLYTGPGKRDAEVAGAVRAGVRWFSVDSPAGLDQADRIAAAHGVEVH 125 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENKS 171 L + S+ G V G + S Sbjct: 126 CLLRVNDRVPNPGQGLTMTGVASQFGADVDWIEQEPQRFRSRPSAPVRGFHLYTGSNVDS 185 Query: 172 FLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 A + + + LGGG + R+ + Sbjct: 186 VDALVAQFTAAARTARRLRDLLGIDLTLLDLGGGFGAPFARPGHNADLTGLADRVATALD 245 Query: 224 KYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV------- 269 E G + TL T VLD+ + V+V S H+ Sbjct: 246 DLFPAWRDGTPEVAFESGRFLTATAGTLLTRVLDVKRSQGTPVVVLESGINHLGGMSGLR 305 Query: 270 --PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 P + +A A+V G C D + V+ GD ++ +V Y Sbjct: 306 RLPPLVPALHAADGRDGAPLEAAIVAGPLCTPLDTWARAANLPDVRPGDVLAVPNVGAYG 365 Query: 328 INRKNW-FNGINMPTIAVKNVDGTIKAIR 355 ++ F G P V + D ++ R Sbjct: 366 LSASLLAFLGHPAPVEVVCDGDRVVETSR 394 >gi|307189142|gb|EFN73590.1| Ornithine decarboxylase [Camponotus floridanus] Length = 403 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 110/351 (31%), Gaps = 23/351 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D ++N + K V A+KC + L G +S E+ L Sbjct: 35 FYIVDIGDVINKHREWIT--KIPRVVPHYAVKCNPDPTVIKILAALNAGFDCASEQEIRL 92 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + K + ++ ++ K KD + I ++ Sbjct: 93 VMQYGVHANRIVFTNPCKYPSHIKYSKKMGINQLTVDSELEILKIKDLYPEAKIVIRMQY 152 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAML 179 + S + F L + + ++G FH + F M Sbjct: 153 DAKNSDANFGLKFGCESDEE-AVRLIQLMMDLDLTLHGFSFHVGSPCRDLNAFNKTIGMC 211 Query: 180 KNIEKEFGHFI-TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI--YLEPGEA 236 K + ++ I +GGG + +F + + + I EPG Sbjct: 212 KRLITIAKTMGCEDVQLIDIGGGFPGERGTE-IDEFANIINDAIQDLDPSIKVISEPGRY 270 Query: 237 IVTNTTTLNTTVLDISENIK------NLVIVDSSVEAHVPDYLLYQESATIYPNT----G 286 +T+ TL + + I + + + L + Sbjct: 271 YITSAFTLAAYLHSKRLSHNNGKITRMYYINVGVYNSFIEELLGLKFRVPQILFKPASNE 330 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + + G +C + D+ + + +GD + +ED+ Y I+ FNG Sbjct: 331 KFLSTLWGPTCDSFDVIVQEVMLPELHLGDWLVWEDMGAYTISICTKFNGF 381 >gi|308070504|ref|YP_003872109.1| diaminopimelate decarboxylase [Paenibacillus polymyxa E681] gi|305859783|gb|ADM71571.1| Diaminopimelate decarboxylase [Paenibacillus polymyxa E681] Length = 470 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 61/435 (14%), Positives = 118/435 (27%), Gaps = 84/435 (19%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y D L ++ + L V++ ALK + L G +S E+ Sbjct: 17 TPFYYYDGDALHAHVSSLLSRLH-PAVRVHYALKANGNVALAGLLRSLGCGVEIASAGEM 75 Query: 64 MLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + E + E Y K +AV I +V +L +D A + + + Sbjct: 76 FVAMEAGYAAEDVLYAGPGKTVAELNEAVACGIGCIHVESVRELRLLEDIAAQAGQFVRA 135 Query: 121 RINPSVSY--------SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN--- 169 + + + +L K + + G+ + + Sbjct: 136 AVRINPDNDLSGATIKMGGVPRPFGVDEGQLDHFFKVLEDCPHVHFQGVQVYTGTQMLKS 195 Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + F+ L+ E+ + + ++LGGG + + + + Q Sbjct: 196 DQILASFANTLQLAERVQAQYGVAMHTVNLGGGFGVPYFAHEQPLDMDHVIDGLNALAEQ 255 Query: 229 I---------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV---------- 269 +E G +V + L E+ +V H Sbjct: 256 TRTRLPGVKLIIESGRYLVAQSGMYVCRALYTKESKGEKFVVADGGMNHYAAATFRGRRI 315 Query: 270 ---PDYLLYQESATIYPNTGP--------------------------------------- 287 + ++ A Sbjct: 316 RDNYPVRIMRKQAGESKEPKEREVEATLWMGQRDASAQTAVAVEQSLEEVANRIGGPLEE 375 Query: 288 -----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPT 341 T + G C D + P+ GD I+F + Y ++ F G P Sbjct: 376 ASMELETVSIVGPLCTPEDCIVKKAQLPPIHEGDYIAFPNAGAYGLSYSPLQFLGHATPA 435 Query: 342 IAVKNVDGTIKAIRE 356 + + G + IRE Sbjct: 436 E-LLDFRGEVHVIRE 449 >gi|163744805|ref|ZP_02152165.1| decarboxylase, pyridoxal-dependent [Oceanibulbus indolifex HEL-45] gi|161381623|gb|EDQ06032.1| decarboxylase, pyridoxal-dependent [Oceanibulbus indolifex HEL-45] Length = 392 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 55/366 (15%), Positives = 117/366 (31%), Gaps = 32/366 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +I ++++ D + A+K A + L + G ++S E+ Sbjct: 34 PTLVISRERVAAQYDALHSGLG--DAHIHYAVKANPAAEIIRLLVKKGSGFDAASRAEIE 91 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + E ++ K A ++ ++L+K A + L Sbjct: 92 LCLSQGAKPENISFGNTIKRASDIAFAHSAGVTLFAADSEAELDKIAAHAPGARVYLRLI 151 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVN--GLMFHNNCENKSFLCFSAM 178 + + +R F G + + + GL FH + + ++ + Sbjct: 152 V-----ENSMADWPLSRKFGCAGSALPALLNHAVAVGLVPFGLSFHVGSQTRKAEFWNPV 206 Query: 179 LKNI---EKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS---VQIY 230 L + ++ ++LGGG + + + + Q+ Sbjct: 207 LDQVAPLWHAARADGHDLQLLNLGGGFPAFYGESIEAPRAYAAAVISAVKARFGDVPQLM 266 Query: 231 LEPGEAIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPDYLLYQ-ESATIYPNT 285 EPG +V + V+ +S V +D + + + + P+ Sbjct: 267 AEPGRGLVAEAGHIAAEVILVSRKSADDLHRWVYLDIGRFSGLAETEGEAIRYQIVTPHD 326 Query: 286 GPYT--AMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINM 339 G T ++ G SC + DI E ++ GD++ Y + + FNG Sbjct: 327 GEETGPCVLAGPSCDSADILYEKRPVHLPLALRDGDKVMIRACGAYTSSYSSVGFNGFPP 386 Query: 340 PTIAVK 345 + V Sbjct: 387 LDVIVL 392 >gi|320007100|gb|ADW01950.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces flavogriseus ATCC 33331] Length = 428 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 53/371 (14%), Positives = 114/371 (30%), Gaps = 36/371 (9%) Query: 9 IDKQKLLNNLDTALYIRK-NAGVKLL--LALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +D + +++D GV++L A K + + L G +S E+ L Sbjct: 16 LDADGIRDSVDALRAAFAAEPGVRVLHTFAAKAASLVPVLRLLADCGMGCEVASPGELRL 75 Query: 66 GHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGLRI 122 E F + A E+ L+ + ++ ++ + ++ + +GLR+ Sbjct: 76 AVEAGFPPARIVLDSPAKTRAELRLALALGVAVNADSFGEIRRIEELRSPGSPSVLGLRV 135 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLC 174 NP V S+ G +D + +E + L H + S Sbjct: 136 NPQVGGGSIGAMSTATATSKFGVALRDPGARERVVQTFAERPWLTRLHAHVGSQGCSLEL 195 Query: 175 FSAMLKNIEKEFGHFITQIEW-----ISLGGGIH-FTDKDYPVKDFCQRL------KEFS 222 +A + + + + +GGG+ D F + + Sbjct: 196 ITAGIAETYRLAEEINEALGTRRITGMDIGGGLPVNFSDDESRPAFAEYVTALRAAAPGM 255 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPDYLLYQ 276 ++ E G +++ + V + + ++ +PD + Sbjct: 256 FDGRYELVTEFGRSLLAKNGFIGARVEYTKEAGGRRIALTHAGAQVATRTVFMPDAWPLR 315 Query: 277 ESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 A + G C AGD+ + + GD + D Y + Sbjct: 316 VGAFDGEGNPRSGRTMVQDIAGPCCFAGDLVAQARELPELHEGDFVVLYDTGAYYFSTPW 375 Query: 333 WFNGINMPTIA 343 +N + P + Sbjct: 376 SYNSLPRPAVY 386 >gi|224061945|ref|XP_002300677.1| predicted protein [Populus trichocarpa] gi|222842403|gb|EEE79950.1| predicted protein [Populus trichocarpa] Length = 381 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 56/362 (15%), Positives = 110/362 (30%), Gaps = 26/362 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D + LD V+ A+K + +L +S E+ Sbjct: 14 PFYVLDLGVVSALLDKWTRTL--PIVRPFYAVKYNPVPALLGSLAALSSNFDCASQAEIE 71 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + Y K A + F++ +L+K + K I ++ Sbjct: 72 LVLSLGVSLDRIVYANPCKPGSHIKYAASVGVNLTTFDSKEELDKIQKWHPKCALLIRIK 131 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + ++ NV G+ FH + + + Sbjct: 132 ALDDSRARCLLGSKY-GALPEEVTPFLEAAQTARLNVVGVSFHIGNRATYSQAYEGAIAS 190 Query: 182 IEKEFGH----FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + F + ++ +++GGG + F + + I EPG Sbjct: 191 AKSVFEAAARFGMPRMTILNIGGGFTAGSLFDEAATSIKPALQAYFPNEPGLTIISEPGR 250 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV---------DSSVEAH-----VPDYLLYQESATI 281 + TL T V+ + + + H P + Sbjct: 251 FFAESPFTLATNVIGKRVRGELREYWINDGIYGSLNCILNDHATITCTPLACNSNSANPT 310 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 Y++MV G +C A D H +++ D + F ++ Y + FNG N Sbjct: 311 CKGEKSYSSMVFGPTCDALDTVLTVHQLPELQVDDWLVFPNMGAYTAAAGSSFNGFNTAA 370 Query: 342 IA 343 I Sbjct: 371 IL 372 >gi|120600420|ref|YP_964994.1| diaminopimelate decarboxylase [Shewanella sp. W3-18-1] gi|146291648|ref|YP_001182072.1| diaminopimelate decarboxylase [Shewanella putrefaciens CN-32] gi|120560513|gb|ABM26440.1| ornithine decarboxylase [Shewanella sp. W3-18-1] gi|145563338|gb|ABP74273.1| ornithine decarboxylase [Shewanella putrefaciens CN-32] gi|319424877|gb|ADV52951.1| Orn/DAP/Arg decarboxylase 2 [Shewanella putrefaciens 200] Length = 391 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 115/358 (32%), Gaps = 26/358 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+ +ID + D + A + A+K A + L +S+YE+ Sbjct: 30 TPFVVIDTSIIAKQYDDMVNSFPYAN--VYYAVKANPAAEILSLLKDKGSNFDIASIYEL 87 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + +Y K + ++ + S+ + + A++ Sbjct: 88 DMVMNVGVTADRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180 + + + + + ++ + G+ FH + + + + + Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLAQELGLEPYGISFHVGSQQRDIGAWDSAIG 206 Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230 ++ F ++ I++GGG D + LKE QI Sbjct: 207 KVKSIFDRLRDEHNITLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285 LEPG ++++N L + V+ IS+ + + + Sbjct: 267 LEPGRSLISNAGILVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIYTEKK 326 Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 G ++ G +C + DI E + + IGDR+ + Y FNG Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384 >gi|302790706|ref|XP_002977120.1| hypothetical protein SELMODRAFT_232921 [Selaginella moellendorffii] gi|300155096|gb|EFJ21729.1| hypothetical protein SELMODRAFT_232921 [Selaginella moellendorffii] Length = 390 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 101/361 (27%), Gaps = 28/361 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D + V A+KC + L G +S E+ Sbjct: 18 FYVLDLATVTRLWKIWKSAMPR--VHPFYAVKCNPDPQLLSMLAALGAGFDVASKAELEA 75 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + K + + S+ +K K ++ LR Sbjct: 76 VTQLGVAPRNIIFANPCKLPSHITEAAKAGVVYTTFDSEGELYKLKKYHPQAEVLLRFRA 135 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + ++ L + ++ V G+ FH F+ +K K Sbjct: 136 DDTGARCPLGVKYGAEWDECYHLLEVAKTLGIKVAGVAFHVGSGASDVNAFAEGIKAARK 195 Query: 185 EFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQR-LKEFSEKYSVQIYLEPGEAIVT 239 F + ++ + +GGG + E++ + + I Sbjct: 196 LFDMAESLGLPRMTMLDIGGGFVSDGGAGVKFAAAAYEIGNALEEHFPRETMADVRIIGE 255 Query: 240 NTTTLNTTVLDISENIKNL--------------VIVDSSVEAHVPDYLLYQESATIYPNT 285 ++ + ++ + + L + + + Sbjct: 256 PGRFFAEEAFSLAVLVFGCRVRRREEGNKTVVEYWINDGIYGSMNCLLYDHATLSDEEDD 315 Query: 286 GP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P + +++ G +C D + ++ GD + F + Y + + FNG + Sbjct: 316 APLLDVELHPSIIFGPTCDGLDTVLSDVWLPRLQCGDWLVFPRMGAYTKSAGSSFNGFAV 375 Query: 340 P 340 P Sbjct: 376 P 376 >gi|282878563|ref|ZP_06287344.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Prevotella buccalis ATCC 35310] gi|281299354|gb|EFA91742.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Prevotella buccalis ATCC 35310] Length = 400 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 62/391 (15%), Positives = 135/391 (34%), Gaps = 31/391 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +KTP +++DK +L ++ + ++K A S Sbjct: 11 LKTPCFVLDKDELTKCINDFQTALDTQFDNSVIGYSVKTNALPYCLKVAKDSGCFAEVVS 70 Query: 60 LYEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E L + + YN + + + T +++ D + Sbjct: 71 FQEYELALKIGYDKRRIIYNGPLKSKQTFLDAIQHDAIVNIETWREIDWLDDLPKNRKHD 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG--------EKCKDKIESE-IKNVNGLMFHNNCE 168 IG+R+N + + A SR G +K + I ++ + G+ H + Sbjct: 131 IGIRLNINTTSISAEDAFGENDDSRFGFSYESGDFQKAVELISAKRHVRLVGIHTHKEPK 190 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEFSEKYSV 227 +S + ++ + Q+E+ +GGG P D+ + + + Sbjct: 191 TRSVRFYQRVIAYVLPILTDLRLQLEYWDVGGGFFGPMPGKPTFDDYARSFRTALDGSPY 250 Query: 228 ---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 ++ +EPG A++++ + +V+D+ ++ + V + ++ + Sbjct: 251 ANVRLVVEPGNALLSSPFSYVCSVIDVKQHDGKRFVTTDGTRNDVDPFFHKEDYFKRFVY 310 Query: 285 TGP-----YTAMVCGRSCLAGDIFGEFHFEKP----VKIGDRISFEDVAGYNINRKNWFN 335 T +V G +CL D + +GDR+ F+ V Y + F Sbjct: 311 TDTPQLCHQPQVVGGLTCLEYDRLFT---LPEGTEALNVGDRVIFDRVGAYTMALTPLFI 367 Query: 336 GINMPTIAVKNVDGTIKAIREF-SYNDYYNN 365 +PT+ +K DG IR +++ Sbjct: 368 HY-LPTVYLKRCDGDYTIIRTEWGVDEFIRK 397 >gi|332020055|gb|EGI60506.1| Ornithine decarboxylase 1 [Acromyrmex echinatior] Length = 402 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 115/357 (32%), Gaps = 24/357 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D ++ + K V A+KC + + L +S E+ Sbjct: 35 FYVMDVGDIIKRHQEWIS--KMPKVVPHYAIKCNSNSTVIKVLAALNAFFDCASKQEIAQ 92 Query: 66 GHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + GE + K N + ++ +L K K+ + I +R Sbjct: 93 VMQYDVQGERIIFAHPNKLPSHIEYSRNVGVERMTVDSEFELTKIKELFPEAKVVIRIRC 152 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S P + + N++G FH + ++ Sbjct: 153 DSKNSPILLGAKFGCDP-CKEATYLIQCAQDLGLNLHGFSFHVGTPCLEIDAYLRGIEIC 211 Query: 183 EKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI--YLEPGEA 236 ++ + ++ I +GGG + + + + + E I EPG Sbjct: 212 KQLIAVAKSIGCNNVKLIDIGGGFSSVSGKE-LDELAKVINDAIENLDPDISVISEPGRY 270 Query: 237 IVTNTTTLNTT-------VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT---- 285 V ++ TL + + D ++ + + + + L Q Sbjct: 271 YVDSSFTLASYLHSKRLAISDDNKTRRMYYMNCGVYNSFFDELLGLQARVPESVFEPKRD 330 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + + + G + + D+ + IG+ + + ++ Y + N FNG +PT+ Sbjct: 331 EKFLSNIWGPTADSYDLILKDVLLPEFHIGNWLVWRNMGAYTLTLSNTFNGFPIPTV 387 >gi|317508088|ref|ZP_07965772.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC BAA-974] gi|316253599|gb|EFV12985.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC BAA-974] Length = 421 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 108/366 (29%), Gaps = 35/366 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P +ID + ++ A+K A + L +S+ E Sbjct: 52 PSPCVVIDLATVRERYWQLTAAL--PSARMYYAVKANPAPEVVRELATIGSSFDVASVPE 109 Query: 63 VMLGHEKFGGETHAYNVA---YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L + + + A ++ + L + A Sbjct: 110 IELCLAEGASAQNLCYGNTIKKRADIARAYELGVRLYTTDSEADLEALAEHAPGSSVFCR 169 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---S 176 ++ + F P L E + G+ FH + + Sbjct: 170 VQAAGHGAVYSFGSKFGCSPE--LAESLLLRAGKLGLVAGGVSFHAGSQQLDPSAWSAGI 227 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS-------V 227 +I ++ +++GGG+ + P+ D+ + + ++ Sbjct: 228 EQAASIASRLAAQGVRLPLLNIGGGLPGSYTQSAPPLGDYADAISAAAREHFAAVGLEAP 287 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLY---- 275 Q+ LEPG +V + L + V+ IS V+A + + Y Sbjct: 288 QLVLEPGRFLVADAGLLRSEVVLISRKSPEDEHRWVYVDAGRYNGLTETEGECVAYLISS 347 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN 332 E + + G +C D+ + + +++GD + F Y + + Sbjct: 348 PEHTGEEAESESGPVYLAGPTCDGDDVLYQRTVYRLPSALRVGDHLDFLSTGAYTASYAS 407 Query: 333 -WFNGI 337 FNG Sbjct: 408 IAFNGF 413 >gi|256274307|gb|EEU09214.1| Spe1p [Saccharomyces cerevisiae JAY291] Length = 466 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 114/380 (30%), Gaps = 39/380 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + +++ +K A+KC + L + +S E+ Sbjct: 87 FFICDLGEVKRLFNNW--VKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144 Query: 66 GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K ++ + + + K K ++ LRI Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIAT 204 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S ++ L+ + I+ N+ G+ FH F +++ Sbjct: 205 DDSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDART 264 Query: 185 EFGH-----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238 F + ++ + +GGG F L+EF V I EPG V Sbjct: 265 VFDKAASEYGLPPLKILDVGGGFQFESFKESTAVLRLALEEFFPVGCGVDIIAEPGRYFV 324 Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284 TL + V+ I N ++ + H + + Sbjct: 325 ATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPRTLYHNLDFHYNDFE 384 Query: 285 --------------TGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNIN 329 PY + G +C D + ++ + V +GD F + Y + Sbjct: 385 STTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSS 444 Query: 330 RKNWFNGI-NMPTIAVKNVD 348 FNG I + + Sbjct: 445 AATQFNGFEQTADIVYIDSE 464 >gi|13774332|gb|AAK38838.1| ornithine decarboxylase [Oculimacula yallundae] Length = 448 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 107/368 (29%), Gaps = 31/368 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + VK A+KC + L G +S E+ Sbjct: 70 FFVADLGEVYR--QHMRWKLNLPRVKPFYAVKCNPDNRVIQLLAALGTGFDCASKAEIEQ 127 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K +N + + K K ++ LRI+ Sbjct: 128 VIKADVDPSRIIYAQPCKTNSYVRYAANHNVKQMTFDNADELHKVKKLFPGAELFLRIST 187 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + + NV G+ FH L + +++ Sbjct: 188 DDSSSLCRLSLKFGAAMDTTDGLLALAKELDLNVVGVSFHVGSGASDPLAYMRAVQDARL 247 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F + + +GGG + C+ L + + + I EPG V++ Sbjct: 248 VFDQAAAHGFSLHTLDIGGGFVSESFEAMASVLCEALDTYMPSH-INIIGEPGRYYVSSA 306 Query: 242 TTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDY--------LLYQES 278 ++ ++ I N S + H Y + Sbjct: 307 FSVACHIIARRTIVEPASSEKSYMIYLNDGLYGNFSSIMFDHQNPIAQVLRTGDRTYFNN 366 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + G +C D E F+ + +GD + FE++ Y FNG Sbjct: 367 IAAQDSVDGTEYSIWGPTCDGIDRISESIRFDHTLDVGDWLYFEEMGAYTKCSATRFNGF 426 Query: 338 NMPTIAVK 345 + + Sbjct: 427 SDAHEVIY 434 >gi|256545739|ref|ZP_05473095.1| diaminopimelate decarboxylase [Anaerococcus vaginalis ATCC 51170] gi|256398435|gb|EEU12056.1| diaminopimelate decarboxylase [Anaerococcus vaginalis ATCC 51170] Length = 393 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 113/381 (29%), Gaps = 42/381 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ K+ + + + ++ L ++K + T+ + G+ ++S EV+ Sbjct: 15 PCYIYQKEIIDKSCQKLQEKFE--NIEFLYSIKANPFMPVIKTIKENGIGSDAASSNEVL 72 Query: 65 L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L Y+ K E + I ++ +L+ + A+ + + + I Sbjct: 73 LSIKAGMEKNQIYYSAPGKTMEDLQKAWDKCIFIADSFHELDLLEKLAKNHGEILEIGIR 132 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFLCFSAMLKNI 182 + +YS + F +K + + GL H + S KN Sbjct: 133 VNPNYSMTDKKAHSSKFGIDEDKIFSFDWTYKNLKLVGLHVHVQSQILDTNLLSNYYKNT 192 Query: 183 EKEFGHF----ITQIEWISLGGGIHFTDKDYPVKD---------FCQRLKEFSEKYSVQI 229 F I++I+ G GI D ++ + + Sbjct: 193 YDLAVKFSKLSHADIKFINFGSGIGVAYDKKNEDDVNLDILAKTMKDLYEKNKNELGAKF 252 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLV------------------------IVDSSV 265 +E G +V ++ T T ++D + Sbjct: 253 LIESGRFLVMDSGTYYTPIIDKKYSNGKTYLVVKNAMNGFVKGPMKEMLKQALGYECKKA 312 Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + E I N+ + G C + D+ K IGD + + Sbjct: 313 FEPLYTGKNQCEFEIIGENSQKEIVDIGGHLCTSLDLLASDIELKKANIGDILKVSNAGA 372 Query: 326 YNINRKN-WFNGINMPTIAVK 345 Y + F ++P + Sbjct: 373 YCFSLSILHFASHDLPKEFLI 393 >gi|38637786|ref|NP_942760.1| putative diaminopimelate decarboxylase [Ralstonia eutropha H16] gi|32527124|gb|AAP85874.1| putative diaminopimelate decarboxylase [Ralstonia eutropha H16] Length = 416 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 53/369 (14%), Positives = 107/369 (28%), Gaps = 36/369 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D + L + G +L A+K + + TL G SS E+ Sbjct: 35 YVYDLEALRRHATATARGLP-PGFELFYAIKANSDLPILQTLAPLAHGFEISSGGELAWV 93 Query: 67 HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGLRI 122 E F ++ K A + + ++ +L + A+ + + LR+ Sbjct: 94 REHFADVPLIFSGPGKTDAELAGALELGVEALHVESLHELERLAWLARARGVTAPVLLRV 153 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCF 175 N ++ + + G + G FH Sbjct: 154 NLAIEGLQATTLMMGGKPTPFGIAGDQLPACLAWLRAHPEIRLRGFHFHLMSHQLDAAAH 213 Query: 176 SAMLKNIEKEFGHF-----ITQIEWISLGGGIHFTD----KDYPVKDFCQRL-KEFSEKY 225 +L ++ + + ++ +++GGGI + + F + L +++ Sbjct: 214 LRLLDAYLQQVRRWRAEYGLDTLDQVNVGGGIGVNYREPERQFDWAGFAEGLPALSAQRD 273 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 + + LE G I V+D+ +V H Y Sbjct: 274 GLTVRLECGRYITAFCGYYAMEVIDVKHAFDRAFVVACGGTHHFRTPYAQGHSHPFRVLP 333 Query: 285 TGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + V G+ C D+ + V+ GD + F Y + + Sbjct: 334 VESWRYPFARPGVRDARVSVVGQLCTPKDVLAQDAPVDSVRAGDMVVFPYAGAYAWHISH 393 Query: 333 W-FNGINMP 340 F P Sbjct: 394 HDFLRHPHP 402 >gi|118472318|ref|YP_890417.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2 155] gi|118173605|gb|ABK74501.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2 155] Length = 459 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 59/396 (14%), Positives = 110/396 (27%), Gaps = 39/396 (9%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 +ID L + + L +A K + + G +S E+ L Sbjct: 44 VIDLDTLDELMASLHAAYPADLPALHTIAAKAISLRPVLARFAAAGFGCEVASPGELELA 103 Query: 67 HE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA---QKLHKKIGLR 121 F E + + A EI L + + +L + + IG+R Sbjct: 104 LAAGFPAERIVFDSPAKTPTEIARALELGVSFNVDNFEELARIDAAVARNGRPRSVIGVR 163 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKI------ESEIKNVNGLMFHNNCENKSFLCF 175 +NP S+ G D + + L H+ + S Sbjct: 164 VNPQTGAGTIDAMSTATSTSKFGIGLADHRDEIIDAFATRPWLTQLHVHSGSQGMSLEHA 223 Query: 176 SAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDYPVKDFCQ-------RLKEFSE 223 + ++ QI+ I +GGG+ + V Sbjct: 224 AEGVRLTTDLAADIDARAGSRQIQRIDVGGGLPVNFRSDDVTPTFADHRAALQAAAPRLF 283 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPDYLLYQE 277 + + E G A+ T+ V I + + ++ P+ + Sbjct: 284 DGTYTVVTEFGRALTAKAGTVVARVEYTKVTGGRPIAITHAGVQVATRSIFAPEAWPLRV 343 Query: 278 ----SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + + P V G +C GD+ PV GD ++ D GY + Sbjct: 344 EVYDAHGRRRDDPPRVQDVAGPACFTGDMLAVGRELPPVHAGDLVAVPDTGGYYFSTHFS 403 Query: 334 FNGINMPTIAVK----NVDGTIKAIRE-FSYNDYYN 364 +N + P + + D R + Sbjct: 404 YNALPRPAVYTVGTDQHGDRRWSLARRAQTIEQIVA 439 >gi|159481612|ref|XP_001698872.1| ornithine decarboxylase 2 [Chlamydomonas reinhardtii] gi|158273364|gb|EDO99154.1| ornithine decarboxylase 2 [Chlamydomonas reinhardtii] Length = 535 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 96/363 (26%), Gaps = 34/363 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y++D V A+KC+ + L G +S E+ + Sbjct: 140 YVVDLASPFRLFKAWRAAMPR--VLPYYAVKCYPEPAILKLLMALGAGFDCASKGELDMM 197 Query: 67 HE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125 + + K S K K LRI Sbjct: 198 LKLGVSPGRIIFAHPCKRGADFRYAREHGITYTTFDSSSELHKIAEMDPEFKCVLRIRAD 257 Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185 ++ L + + V G+ FH K+ F+ + N K Sbjct: 258 DPGARVPLGLKYGAEVEEAAGLLAEAKQLGLEVVGVSFHVGSAAKNLATFTNAIANARKV 317 Query: 186 FGH---FITQIEWISLGGG---IHFTDKDYPVKDFCQRLKEFSEKYSVQ--------IYL 231 F ++E + +GGG + + + Y + Sbjct: 318 FDDAAGMGFKMELLDIGGGFTGHFDECGNVMFGEIANTINAALATYFPPGGDLGDVRVIA 377 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV----------EAHVPDYLLYQES--- 278 EPG ++TL T V+ + + V D + Sbjct: 378 EPGRYFAETSSTLMTVVIGQRDRPQKDGSTHKDYWLTDGLYGSFNCIVYDGQNPEWRIVR 437 Query: 279 ----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 Y + + G +C + D+ + ++ GD + + + Y + F Sbjct: 438 SPILPDPADAKTTYVSTLWGPTCDSADVVYKDVALPELRNGDWLLWPNAGAYTVAGACDF 497 Query: 335 NGI 337 NGI Sbjct: 498 NGI 500 >gi|296158669|ref|ZP_06841499.1| Diaminopimelate decarboxylase [Burkholderia sp. Ch1-1] gi|295891237|gb|EFG71025.1| Diaminopimelate decarboxylase [Burkholderia sp. Ch1-1] Length = 477 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 57/405 (14%), Positives = 123/405 (30%), Gaps = 53/405 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P Y+I + +L + V++L A K + LNQ G + E Sbjct: 50 PLYIISENELRDRYRAFRDGFLAHYPQVEILFANKSNNGLAIRHILNQEGAGGDCFGVNE 109 Query: 63 VMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + + +D E++ ++N + + + +L++ +++L +K+ + Sbjct: 110 MYIALLAGTDPQKLVLNGSNKQDEELEMAIANGICVNIDAMDELDRIDVISKRLGRKVAI 169 Query: 121 RIN-----------PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLM 162 I V+ ++ G + + + Sbjct: 170 GIRLKLDLLPLAGRTGVAMHGPGTLKEQSDSTKWGMTREQTVDIVKRAQKMANIELKETH 229 Query: 163 FHNNCENKSFLCFSAMLKNIEKE----FGHFITQIEWISLGGGIHFTDKDYPVKD----- 213 FH + + F+ M + + I +GGG F Sbjct: 230 FHLSRMSNDPENFAIMAREMIVWSGFLRDETGWTPPCIDIGGGWTFGKWYGTGPRSQIDD 289 Query: 214 ------------FCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 + E +E+ ++ +EPG AI + V I + Sbjct: 290 SAAPTPDIYGRLCGAAICEEAERLKLPLPKLRIEPGRAISGPSGVAVGQVGAIKQGASKK 349 Query: 259 VIVDSSVEAHV-----PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 + H+ D+ + + + G C + D G ++ Sbjct: 350 WVNLDLSTNHLSWASALDWYYHAVAVKDTGREANDHVDLVGPLCNS-DEVGADRVMPLLE 408 Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREF 357 GD ++F D GY + +N +P + + D + +RE Sbjct: 409 RGDFVAFLDAGGYTESGAARYNAQLLPATVLVSGDTAEVTTVREQ 453 >gi|162147147|ref|YP_001601608.1| ornithine decarboxylase [Gluconacetobacter diazotrophicus PAl 5] gi|161785724|emb|CAP55295.1| putative ornithine decarboxylase [Gluconacetobacter diazotrophicus PAl 5] Length = 441 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 104/357 (29%), Gaps = 27/357 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++D ++ + ++ A+K A + L ++S E+ Sbjct: 81 TPCLVVDVDRVEARYQSLRAALPL--ARIYYAVKANPAPAILRRLVSLGSAFDAASWEEI 138 Query: 64 MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 L G ++ A + F+++ +L K A L Sbjct: 139 RLCLAAGAAGADISFGNTVKKASAIAQAHQAGVTMFAFDSIEELEKLARHAPGSRVYCRL 198 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + + S + + GL FH + S + A + Sbjct: 199 IVENEGAEWPLSRKFGTTLDSARDLMLRARDMGLDP--YGLSFHVGSQQTSTDAYEAAIA 256 Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYL 231 + F + ++LGGG ++ + + E ++ + Sbjct: 257 RVGMLFTDLAAAGLNLRMVNLGGGFPIRYREDVPEIDRFAVAISHAMTEHFGNDLPEMIV 316 Query: 232 EPGEAIVTNTTTLNTTVLDI----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 EPG IV + +++ V+ + ++ V +D + + I Sbjct: 317 EPGRFIVGDAGVVSSEVVLVTRRGQQDGPRWVYLDIGRFGGLAETEGESIRYGIRTPHDG 376 Query: 288 YT---AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINR-KNWFNGI 337 + G +C DI E + + GDRI Y FNG Sbjct: 377 SPAGRVAIAGPTCDGADIMYEKAPYALPLDLACGDRIELLSTGAYVSTYCSTSFNGF 433 >gi|207343677|gb|EDZ71070.1| YKL184Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 466 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 114/380 (30%), Gaps = 39/380 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + +++ +K A+KC + L + +S E+ Sbjct: 87 FFICDLGEVKRLFNNW--VKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144 Query: 66 GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K ++ + + + K K ++ LRI Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIAT 204 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S ++ L+ + I+ N+ G+ FH F +++ Sbjct: 205 DDSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDART 264 Query: 185 EFGH-----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238 F + ++ + +GGG F L+EF V I EPG V Sbjct: 265 VFDKAANEYGLPPLKILDVGGGFQFESFKESTAVLRLALEEFFPVGCGVDIIAEPGRYFV 324 Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284 TL + V+ I N ++ + H + + Sbjct: 325 ATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPRTLYHNLEFHYNDFE 384 Query: 285 --------------TGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNIN 329 PY + G +C D + ++ + V +GD F + Y + Sbjct: 385 STTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSS 444 Query: 330 RKNWFNGI-NMPTIAVKNVD 348 FNG I + + Sbjct: 445 AATQFNGFEQTADIVYIDSE 464 >gi|190409659|gb|EDV12924.1| ornithine decarboxylase [Saccharomyces cerevisiae RM11-1a] Length = 466 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 114/380 (30%), Gaps = 39/380 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + +++ +K A+KC + L + +S E+ Sbjct: 87 FFICDLGEVKRLFNNW--VKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144 Query: 66 GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K ++ + + + K K ++ LRI Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIAT 204 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S ++ L+ + I+ N+ G+ FH F +++ Sbjct: 205 DDSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDART 264 Query: 185 EFGH-----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238 F + ++ + +GGG F L+EF V I EPG V Sbjct: 265 VFDKAANEYGLPPLKILDVGGGFQFESFKESTAVLRLALEEFFPVGCGVDIIAEPGRYFV 324 Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284 TL + V+ I N ++ + H + + Sbjct: 325 ATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPRTLYHNLEFHYNDFE 384 Query: 285 --------------TGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNIN 329 PY + G +C D + ++ + V +GD F + Y + Sbjct: 385 STTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSS 444 Query: 330 RKNWFNGI-NMPTIAVKNVD 348 FNG I + + Sbjct: 445 AATQFNGFEQTADIVYIDSE 464 >gi|114045955|ref|YP_736505.1| ornithine decarboxylase [Shewanella sp. MR-7] gi|113887397|gb|ABI41448.1| ornithine decarboxylase [Shewanella sp. MR-7] Length = 391 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 116/358 (32%), Gaps = 26/358 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+ +ID + D + A + A+K A + L +S+YE+ Sbjct: 30 TPFVVIDTNIIAKQYDDMVNSFPYAD--VYYAVKANPAAEILTLLKNKGSNFDIASIYEL 87 Query: 64 MLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + + +Y K + ++ + S+ + + A++ Sbjct: 88 DMVTNVGVTPDRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180 + + + + + ++ + G+ FH + + + + + Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLAKELGLEPFGISFHVGSQQRDIGAWDSAIG 206 Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230 ++ F ++ I++GGG D + LKE QI Sbjct: 207 KVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285 LEPG ++++N L + V+ IS+ + + + Sbjct: 267 LEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIFTHKQ 326 Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 G ++ G +C + DI E + + IGDR+ + Y FNG Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384 >gi|333026994|ref|ZP_08455058.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071] gi|332746846|gb|EGJ77287.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071] Length = 494 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 55/396 (13%), Positives = 111/396 (28%), Gaps = 40/396 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 +D + L A+K + + + LN+ G +S E+ L Sbjct: 78 VDVTGVREAARELRAAFAGPAPVLHTFAVKAASLVPVLELLNEEGVGCEVASPGELELAR 137 Query: 68 E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRIN 123 + A E+ L++ + + +L + +G+R+N Sbjct: 138 AAGVPASRIVLDSPAKTVAELRDALAHGIAVNADNPQELARIDALLAEGPTDSPLGVRVN 197 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE----NKS 171 P V S+ G +D + E + L H + Sbjct: 198 PQVGTGSIGAMSTATATSKFGVALRDPGAEDWLVRQYVERPWLTRLHTHTGSQGVALELM 257 Query: 172 FLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225 + E+ Q ++ I +GGG+ + + + + Sbjct: 258 AESVRIVYGLAERINREVGRQQVDTIDIGGGLPVNFEGEEITPRFAAYAKLLRETVPGLF 317 Query: 226 --SVQIYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDYLLYQE 277 I E G +++ + V + + + ++ VPD + Sbjct: 318 DGRYTIVTEFGRSLLAKQGFVAALVEYTKTSGGRRIAVTHAGAQVATRTVFVPDSWPLRV 377 Query: 278 SATIYPNTGPYTAMVC----GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 +A T + + G C AGD+ + GD I+ D Y + Sbjct: 378 AAFASDGTLKESPDLVQDVAGPCCFAGDLVARARTLPELSPGDLIALWDTGAYYFSTHFA 437 Query: 334 FNGINMPTI-AVKNVDGTI----KAIREFSYNDYYN 364 +N + P + D R S + Sbjct: 438 YNSLPRPAVHGFWTDDEGRTRFATIRRGQSLAELLA 473 >gi|319891631|ref|YP_004148506.1| Siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus pseudintermedius HKU10-03] gi|317161327|gb|ADV04870.1| Siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus pseudintermedius HKU10-03] Length = 400 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 46/379 (12%), Positives = 102/379 (26%), Gaps = 36/379 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 ++ D L +L+T + ++ A+K + + + ++ G +S E+ Sbjct: 20 FIYDMDGLRQHLETVTSQLPD-NCEMYYAMKANSESEILAAIQPHVAGFEVASEGEIAKA 78 Query: 67 HEKFGGE-THAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E D + + I ++ +L + ++ + + + + Sbjct: 79 LVHTTAEHVIFGGPGKTDESLRYAIQQGIRRIHVESLYELERLNALLKQENATMSILLRV 138 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN----KSF 172 + ++ G + G FH+ N Sbjct: 139 NLAGPFPAATLHMAGQPTQFGIDETEVDTVIATAQNMPRIQLEGFHFHSISNNLDAALHL 198 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQ 228 + + + ++ +++GGGI + + F L E+ +Q Sbjct: 199 QVMTLYFQKAKAWAAQHDFTLQHLNVGGGIGVNYADLNEQFDWTYFTTELSALIEEEGLQ 258 Query: 229 IY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284 E G +V + T VLDI + H Sbjct: 259 NITINFECGRYMVAHIGYYVTEVLDIKRVHGAWFAILKGGTQHFRLPVSWQHNHPFEILP 318 Query: 285 TGP------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 G G+ C D+F + + GD + F Y + + Sbjct: 319 LGEQANQIAPRTIEQQAVTFVGQLCTPKDVFAKAVELLALSTGDAVIFIYAGAYGWSISH 378 Query: 333 W-FNGINMPTIAVKNVDGT 350 F P + + Sbjct: 379 HDFLSHPHPQCIYWSSEKE 397 >gi|6322664|ref|NP_012737.1| Spe1p [Saccharomyces cerevisiae S288c] gi|118385|sp|P08432|DCOR_YEAST RecName: Full=Ornithine decarboxylase; Short=ODC gi|172070|gb|AAA34829.1| ornithine decarboxylase [Saccharomyces cerevisiae] gi|395241|emb|CAA52254.1| unnamed protein product [Saccharomyces cerevisiae] gi|486325|emb|CAA82027.1| SPE1 [Saccharomyces cerevisiae] gi|285813085|tpg|DAA08982.1| TPA: Spe1p [Saccharomyces cerevisiae S288c] Length = 466 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 114/380 (30%), Gaps = 39/380 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + +++ +K A+KC + L + +S E+ Sbjct: 87 FFICDLGEVKRLFNNW--VKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144 Query: 66 GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K ++ + + + K K ++ LRI Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIAT 204 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S ++ L+ + I+ N+ G+ FH F +++ Sbjct: 205 DDSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDART 264 Query: 185 EFGH-----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238 F + ++ + +GGG F L+EF V I EPG V Sbjct: 265 VFDKAANEYGLPPLKILDVGGGFQFESFKESTAVLRLALEEFFPVGCGVDIIAEPGRYFV 324 Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284 TL + V+ I N ++ + H + + Sbjct: 325 ATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPRTLYHNLEFHYDDFE 384 Query: 285 --------------TGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNIN 329 PY + G +C D + ++ + V +GD F + Y + Sbjct: 385 STTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSS 444 Query: 330 RKNWFNGI-NMPTIAVKNVD 348 FNG I + + Sbjct: 445 AATQFNGFEQTADIVYIDSE 464 >gi|151941735|gb|EDN60096.1| ornithine decarboxylase [Saccharomyces cerevisiae YJM789] gi|323336859|gb|EGA78121.1| Spe1p [Saccharomyces cerevisiae Vin13] gi|323354229|gb|EGA86073.1| Spe1p [Saccharomyces cerevisiae VL3] Length = 466 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 114/380 (30%), Gaps = 39/380 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + +++ +K A+KC + L + +S E+ Sbjct: 87 FFICDLGEVKRLFNNW--VKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144 Query: 66 GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K ++ + + + K K ++ LRI Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIAT 204 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S ++ L+ + I+ N+ G+ FH F +++ Sbjct: 205 DDSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDART 264 Query: 185 EFGH-----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238 F + ++ + +GGG F L+EF V I EPG V Sbjct: 265 VFDKAANEYGLPPLKILDVGGGFQFESFKESTAVLRLALEEFFPVGCGVDIIAEPGRYFV 324 Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284 TL + V+ I N ++ + H + + Sbjct: 325 ATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPRTLYHNLEFHYNDFE 384 Query: 285 --------------TGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNIN 329 PY + G +C D + ++ + V +GD F + Y + Sbjct: 385 STTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSS 444 Query: 330 RKNWFNGI-NMPTIAVKNVD 348 FNG I + + Sbjct: 445 AATQFNGFEQTADIVYIDSE 464 >gi|24375622|ref|NP_719665.1| decarboxylase, pyridoxal-dependent [Shewanella oneidensis MR-1] gi|24350523|gb|AAN57109.1|AE015844_11 decarboxylase, pyridoxal-dependent [Shewanella oneidensis MR-1] Length = 391 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 114/358 (31%), Gaps = 26/358 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+ +ID + D + A + A+K A + L +S+YE+ Sbjct: 30 TPFVVIDTSIIAKQYDDMVNSFPYAD--VYYAVKANPAAEILTLLKDKGSNFDIASIYEL 87 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + +Y K + ++ + S+ + + A++ Sbjct: 88 DMVMNVGVTADRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180 + + + + + + + G+ FH + + + + + Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLANELGLEPYGISFHVGSQQRDIGAWDSAIG 206 Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230 ++ F ++ I++GGG D + LKE QI Sbjct: 207 KVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285 LEPG ++++N L + V+ IS+ + + + Sbjct: 267 LEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIFTHKQ 326 Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 G ++ G +C + DI E + + IGDR+ + Y FNG Sbjct: 327 GELEKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384 >gi|114800350|ref|YP_761668.1| decarboxylase, group IV [Hyphomonas neptunium ATCC 15444] gi|114740524|gb|ABI78649.1| decarboxylase, group IV [Hyphomonas neptunium ATCC 15444] Length = 398 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 43/363 (11%), Positives = 97/363 (26%), Gaps = 25/363 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P Y +++ + + A+K A + D L + ++S E+ Sbjct: 19 PTYCFRPERVTAAASWFVEKFP---AQPFYAVKVNPAPHVLDALWEGGIRSFDAASEKEI 75 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAV---LSNCDTIIFNTVSQLNKF---KDKAQKLHKK 117 L +F A+ K + +++++L+K D A+ L Sbjct: 76 ELIRGRFPDARIAFLHPVKPRRAIERAYKQHGVRIFVTDSMAELHKILDATDFAKDLTIL 135 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + ++ S + ++ V FH + ++ Sbjct: 136 VRIAVSNEGSALPLSGKFGASAAEAAELLSVARRYADELGV---SFHVGSQAMKPSAWAQ 192 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 + + + ++ + +GGG D + + LE + Sbjct: 193 AMADASRVIIDAGVTVDIVDVGGGFPAIYADKNPPAMDDYVAMVMRSFENMFVLENADLW 252 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP---------- 287 L + + + L Sbjct: 253 CEPGRALVAEAESLLVGVDLAKDNAIYINEGSYGALYDAVHENWVFPMRAISGDGRKLGR 312 Query: 288 -YTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 V G +C + D+ G+ + GD I ++ Y + FNG +A+ Sbjct: 313 MVEYTVYGPTCDSADMLPGKVWLPAGLTEGDYIEIGNIGAYGRSMATRFNGFGESDVAIV 372 Query: 346 NVD 348 Sbjct: 373 QDS 375 >gi|29833865|ref|NP_828499.1| diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] gi|29610990|dbj|BAC75034.1| putative diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] Length = 408 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 51/375 (13%), Positives = 102/375 (27%), Gaps = 40/375 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D +L + V+L A K + L Y+DG +S E+ Sbjct: 21 PAYVYDLAELRAHAAGVRAALPER-VELYYAAKANPEPEILAALAPYVDGYEVASGGELA 79 Query: 65 LGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G A+ D A+ + +L+ ++A+++ + + Sbjct: 80 HVAQAVPGRPLAFGGPGKTPDEVAAALAGGVQRFHVESEYELHMLAEQARRVTPGTRVAV 139 Query: 123 NPSV------SYSKFILADPNRPFSRLGEKCKDK---------IESEIKNVNGLMFHNNC 167 P + G + G+ H Sbjct: 140 LPRFNLPVRDGSLAGSALAMGGRPTPFGLDPAQAGTVLRLLTDGTYPHLELRGVHAHLAS 199 Query: 168 ENKSFLC---FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKE 220 ++ ++ G + +++GGG+ + + + L Sbjct: 200 GLEAPEQLAVAETVVGWATDMAGEHGVGLGEVNVGGGMTVDYAAPERRFDWVTYGKGLAR 259 Query: 221 FSEKYSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQ-- 276 + + +EPG A+ T VLD+ + V H+ Sbjct: 260 LAHAHPELTLRIEPGRALTAYCGWYATEVLDVKRSHGEEFAVVRGGTHHLRTPATKGHDQ 319 Query: 277 ----------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 P + G+ C D+ ++ GDR++F Y Sbjct: 320 PCSVLPVDGWPHPWPRPAAEAERVTLTGQLCTPKDVLARQVPAGGLRAGDRVAFALAGAY 379 Query: 327 NINRKNW-FNGINMP 340 N + F P Sbjct: 380 AWNISHHDFLMHPRP 394 >gi|307545925|ref|YP_003898404.1| diaminopimelate decarboxylase [Halomonas elongata DSM 2581] gi|307217949|emb|CBV43219.1| putative diaminopimelate decarboxylase [Halomonas elongata DSM 2581] Length = 420 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 48/378 (12%), Positives = 100/378 (26%), Gaps = 34/378 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D L GV+L A+K + + DTL +DG SS E+ Sbjct: 28 AFFYDLPALAAQGSAMKAALP-PGVELYYAIKANSEAAIIDTLAPVVDGLELSSGGEIER 86 Query: 66 GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + D ++ A ++ ++ ++ + + A L + + + Sbjct: 87 ACACSTPRPWVLSGPGKLDSDMRAAMTRGVEAFHVESLGEVARLQTIAASLDRVQPVLVR 146 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDK---------IESEIKNVNGLMFHNNCENKSFLC 174 + S + + + + + ++ + G H K Sbjct: 147 INPSLPEDLSSRLRMAGTATPFGIDEAQLADAVRAVDDAPNLALVGFHVHAMSHQKCERR 206 Query: 175 FSA------MLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224 + Q+ +++GGGI + + C+ L++ Sbjct: 207 HQRLLASYLERWPRWRALARHPEQVIQLNVGGGIGVNYLQPSEQFDWPGLCRALEQRLAA 266 Query: 225 YSVQIY--LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATI 281 E G + V+D + +V + I Sbjct: 267 MHEPPLVRFEIGRFLSAFCGYYAIEVIDTKVSHGEGFLVCRGGTHQFRLPAAQGHDHPVI 326 Query: 282 YPNTGP--------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN- 332 + P V G+ C D+ + V+ GD + Y N + Sbjct: 327 HLPRTPRRALGGESRPWTVVGQLCTPKDVLSRRQELQGVEAGDLLVLPLAGAYGYNISHA 386 Query: 333 WFNGINMPTIAVKNVDGT 350 F P Sbjct: 387 DFLCHPRPDQVFVRESRE 404 >gi|160873608|ref|YP_001552924.1| diaminopimelate decarboxylase [Shewanella baltica OS195] gi|160859130|gb|ABX47664.1| Diaminopimelate decarboxylase [Shewanella baltica OS195] gi|315265837|gb|ADT92690.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica OS678] Length = 391 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 115/358 (32%), Gaps = 26/358 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+ +ID + D + A + A+K A + L +S+YE+ Sbjct: 30 TPFVVIDTSIIAKQYDDMVNSFPYAN--VYYAVKANPAAEILSLLKDKGSNFDIASIYEL 87 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + +Y K + ++ + S+ + + A++ Sbjct: 88 DMVMNVGVTTDRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180 + + + + + ++ + G+ FH + + + + + Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLAQELGLEPFGISFHVGSQQRDIGAWDSAIG 206 Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230 ++ F ++ I++GGG D + LKE QI Sbjct: 207 KVKSIFDRLRDEHNITLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285 LEPG ++++N L + V+ IS+ + + + Sbjct: 267 LEPGRSLISNAGILVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIYTDRQ 326 Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 G ++ G +C + DI E + + IGDR+ + Y FNG Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384 >gi|315506498|ref|YP_004085385.1| orn/dap/arg decarboxylase 2 [Micromonospora sp. L5] gi|315413117|gb|ADU11234.1| Orn/DAP/Arg decarboxylase 2 [Micromonospora sp. L5] Length = 415 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 59/389 (15%), Positives = 105/389 (26%), Gaps = 37/389 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y D ++ + T + +L +LK + L+ S E Sbjct: 7 DTPAYRYDLARVRASHATLVAALPAP-SRLFYSLKANPHPALVAALHTAGCDAEICSPGE 65 Query: 63 VMLG-HEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI- 118 + G+ Y +D E+ + ++ + L++ A ++ Sbjct: 66 LAAALRAGVPGDRMLYTGPGKRDAEVTEAVRGGVRWFSVDSPAGLDQADRIAAAHGVEVH 125 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENKS 171 L + S+ G V G + S Sbjct: 126 CLLRVNDRVPNPGQGLTMTGVASQFGADVDWIEQEPQRFRSRPSAPVRGFHLYTGSNVDS 185 Query: 172 FLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 A + + + LGGG + R+ + Sbjct: 186 VDALVAQFTAAARTARRLRDLLGIDLTLLDLGGGFGAPFARPGQNADLTGLADRVATALD 245 Query: 224 KYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV------- 269 E G + TL T VLD + V+V S H+ Sbjct: 246 DLFPAWRDGTPEVAFESGRFLTATAGTLLTRVLDFKRSQGTPVVVLESGINHLGGMSGLR 305 Query: 270 --PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 P + +A A+V G C D + V+ GD ++ +V Y Sbjct: 306 RLPPLVPALHAADGRDGAPLEAAIVAGPLCTPLDTWARAANLPDVRPGDVLAVPNVGAYG 365 Query: 328 INRKNW-FNGINMPTIAVKNVDGTIKAIR 355 ++ F G P V + D ++ R Sbjct: 366 LSASLLAFLGHPAPVEVVCDGDRVVETSR 394 >gi|148554414|ref|YP_001261996.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1] gi|148499604|gb|ABQ67858.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1] Length = 401 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 50/367 (13%), Positives = 109/367 (29%), Gaps = 27/367 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61 P ++ ++ NL+ +G ++ A+KC + + L G S Sbjct: 36 PLFVYGAGRVRANLNRLRGALGASGCAHRIYYAMKCNRFAPLLEMLAADGAVGVDICSPD 95 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKF----KDKAQKL 114 E+ L F ++ L D I +++ Q+ + +A + Sbjct: 96 ELDLALACGFRAGDISFTGTSVADRDLDRLLVHDDLHINCDSLGQIRRIGERRPGRAIGI 155 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCE--N 169 G S F E+ + + ++ + + FH C + Sbjct: 156 RINPGFGTGYGDSARLTYAGARTTKFGIYREQWAEALGLAARHDLRITAIHFHVGCGYLS 215 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225 + + + + +++GGG+ + + + Sbjct: 216 GQLDAWDRAVGAAADFLAD-LPEATTVNIGGGLGLPHRAGDAPLDLARWSSIVARHFGGR 274 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYP- 283 + + +EPG+ +V + L +V+ + V VD H + Sbjct: 275 GLTVAIEPGDYLVKDAGLLLLSVVGVERKRDTLFVAVDGGFNLHPEPAHYDLPCEPVACV 334 Query: 284 -----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 V G A D++ E H P++ GD ++ + GY + Sbjct: 335 LREPDPARWQPVSVAGNINEALDLWAEDHPMPPLEEGDHVALINAGGYGSAMSSNHCMRG 394 Query: 339 MPTIAVK 345 T + Sbjct: 395 AFTELLV 401 >gi|78048867|ref|YP_365042.1| putative diaminopimelate decarboxylase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037297|emb|CAJ25042.1| putative diaminopimelate decarboxylase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 429 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 107/370 (28%), Gaps = 32/370 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D L + + + A +L A K A + TL ++DG ++S E+ Sbjct: 27 AYVYDLAALDTH-AAWMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAW 85 Query: 66 GHEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 H + + D E+ + D + ++S+L + A + + + + Sbjct: 86 LHAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLR 145 Query: 124 PS---VSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFL 173 + L +P G D + + + G FH +S Sbjct: 146 MNIAVPGAQSTRLMMGGQPSP-FGLDPSDLDAAVRRVQANPSLRLEGFHFHLMSHQRSAA 204 Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225 ++ + ++ GGG + FC L ++ Sbjct: 205 AQLHLVAAYLHTVQQWRQTYALGPLRVNAGGGFGVDYLAPDASFDWARFCAGLPAVLREH 264 Query: 226 SV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++ LEPG + + VLD+ + V H Sbjct: 265 GTDLRLRLEPGRYLSASCGWYLMEVLDLKRSHGAWFAVARGGTHHFRTPAAQAHDHPFRV 324 Query: 284 NTGPY-------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335 G + G+ C D+ + GD ++F Y N + F Sbjct: 325 LRGERAPVLRDTPVTLVGQLCTPKDVLARQQPVAALAPGDCLAFPLAGAYAWNISHQHFL 384 Query: 336 GINMPTIAVK 345 P + Sbjct: 385 MHPAPQMVFL 394 >gi|198434976|ref|XP_002131383.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Ciona intestinalis] Length = 551 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 107/393 (27%), Gaps = 54/393 (13%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM- 64 +++ D ++ V A+KC + L G +S E+ Sbjct: 40 FFICDLGDVMKKYIRWQKNFPR--VIPHYAIKCNPDEILLKMLIGLGTGFDCASKSEIRQ 97 Query: 65 -LGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRI 122 L + N + + N I+F+ K K + LRI Sbjct: 98 MLALGARPEQIIFANPCKQASHVRYARDNNVKRIVFDN--VEELIKMKKNFPTADLVLRI 155 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 S S + + ++ D NV G+ FH + F L+N Sbjct: 156 QTDDSQSICRFSMKYGAHPDVCKQLLDTAHKMNLNVVGISFHVGSGCQDVQAFVKALQNA 215 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDK-DYPVKDFCQRLKEFSEKYSVQ-------IYL 231 F ++ + +GGG T+ + ++ + ++ + Sbjct: 216 RVLFDYAECIGYKLNLLDIGGGFPGTEDVNLKFEEIASVVNMTLKELFPMEEFPHVDVIA 275 Query: 232 EPGEAIVTNTTTLNTTVLDIS----------------------------------ENIKN 257 EPG + TL + ++ Sbjct: 276 EPGRYFAASAYTLASNIIAKREVMRDVTEETVCEQTGHTDTIENRSSPTRCDEPAYMYYI 335 Query: 258 LVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIG 315 + S D+ P+ V G +C D E + +G Sbjct: 336 NDGLYGSFNCLFYDHAHVTPKLLKEPSEIDMLYSSSVWGPTCDGLDRICELVQLPQLDVG 395 Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 + I +ED+ Y + + FNG + D Sbjct: 396 NWILWEDMGAYTMAAGSSFNGFKTSKVYYVISD 428 >gi|113971837|ref|YP_735630.1| ornithine decarboxylase [Shewanella sp. MR-4] gi|113886521|gb|ABI40573.1| ornithine decarboxylase [Shewanella sp. MR-4] Length = 391 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 116/358 (32%), Gaps = 26/358 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+ +ID + D + A + A+K A + L +S+YE+ Sbjct: 30 TPFVVIDTSIIAKQYDDMVNSFPYAD--VYYAVKANPAAEILTLLKNKGSNFDIASIYEL 87 Query: 64 MLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + + +Y K + ++ + S+ + + A++ Sbjct: 88 DMVTNVGVTPDRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180 + + + + + ++ + G+ FH + + + + + Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLAKELGLEPFGISFHVGSQQRDIGAWDSAIG 206 Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230 ++ F ++ I++GGG D + LKE QI Sbjct: 207 KVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285 LEPG ++++N L + V+ IS+ + + + Sbjct: 267 LEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIFTHKQ 326 Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 G ++ G +C + DI E + + IGDR+ + Y FNG Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384 >gi|120586900|ref|YP_961245.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio vulgaris subsp. vulgaris DP4] gi|120564314|gb|ABM30057.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio vulgaris DP4] Length = 547 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 59/405 (14%), Positives = 109/405 (26%), Gaps = 49/405 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++D++ L + + + G +L + K G+ L+ G + S Sbjct: 58 GTPLLVVDEKALRAKVAEVRAVLDDELPGARLTYSYKTNCIPGILRVLHDAGVGAEAISA 117 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 YE L GE YN + +++ I + +++ +AQ Sbjct: 118 YEYWLAQSLGVPGEQLIYNGVDKSPESLAMAVAHGALINIDNRDEVDAVLATARAQGRVA 177 Query: 117 KIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 +IGLR+ + S + K E ++ L F+ + Sbjct: 178 RIGLRLGLNRSAQFGLDPDSAEGDGDIAHVVARCKAHPEHASLEALHFNVTSNARHSGYH 237 Query: 176 SAMLKN----IEKEFGHFITQIEWISLGGGIH-------------------------FTD 206 L + I + +GGG + D Sbjct: 238 VRCLALALDVMRTLARVHGVHIRLLDVGGGFGVQTSKNMSGVEYGLYRLFGVAPGGAWLD 297 Query: 207 KDYPV----KDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259 +D L + + LEPG + + L T V + E Sbjct: 298 PFQDFRLYIRDMAALLTSYCRDNGLPQPVVCLEPGRLLTSGAELLLTRVKAVKERPGAEP 357 Query: 260 IVDSSVEAH---VPDYLLYQESATIYPNTGP--YTAMVCGRSCLAGDIFGEFHFEKPVKI 314 + P + E+ + P V GR C D + Sbjct: 358 FAITDGGRLSQAYPCDFEWHEAFLVNDLRRPLARAYTVTGRVCTRSDWLYRGKVMPELAP 417 Query: 315 GDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD ++ D Y + F + ++ Sbjct: 418 GDILAVLDAGAYFSSYAMNF-AFPRAAVVGVEDGRARVMRHRETF 461 >gi|126176045|ref|YP_001052194.1| diaminopimelate decarboxylase [Shewanella baltica OS155] gi|152999015|ref|YP_001364696.1| diaminopimelate decarboxylase [Shewanella baltica OS185] gi|304411520|ref|ZP_07393133.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica OS183] gi|307306704|ref|ZP_07586446.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica BA175] gi|125999250|gb|ABN63325.1| ornithine decarboxylase [Shewanella baltica OS155] gi|151363633|gb|ABS06633.1| Diaminopimelate decarboxylase [Shewanella baltica OS185] gi|304350047|gb|EFM14452.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica OS183] gi|306910672|gb|EFN41101.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica BA175] Length = 391 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 115/358 (32%), Gaps = 26/358 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+ +ID + D + A + A+K A + L +S+YE+ Sbjct: 30 TPFVVIDTSIIAKQYDDMVNSFPYAN--VYYAVKANPAAEILSLLKDKGSNFDIASIYEL 87 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + +Y K + ++ + S+ + + A++ Sbjct: 88 DMVMNVGVTTDRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180 + + + + + ++ + G+ FH + + + + + Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLAQELGLEPFGISFHVGSQQRDIGAWDSAIG 206 Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230 ++ F ++ I++GGG D + LKE QI Sbjct: 207 KVKSIFDRLRDEHNITLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285 LEPG ++++N L + V+ IS+ + + + Sbjct: 267 LEPGRSLISNAGILVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIYTDRQ 326 Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 G ++ G +C + DI E + + IGDR+ + Y FNG Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384 >gi|170046134|ref|XP_001850633.1| ornithine decarboxylase 1 [Culex quinquefasciatus] gi|167869006|gb|EDS32389.1| ornithine decarboxylase 1 [Culex quinquefasciatus] Length = 438 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 100/369 (27%), Gaps = 28/369 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +LI+ L+ ++R V+ A+K + +T G +S EV Sbjct: 36 PLHLIELDTLMK--RHYQWLRHLPRVRPFYAIKSNDDAALVETAILLGCGFDCASKAEVH 93 Query: 65 LGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E + A + +F++ +L K + + I R Sbjct: 94 RVLGFGVDRERIIFAQPAKTIESLRYAREKNIRTVFDSEFELRKLHEHYPEAEVLIRYRF 153 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN---KSFLCFSAML 179 + + P + V G F+ + F Sbjct: 154 DSRNARVNLGNKFGCDPGQEARVLL-QLAKDLGIKVVGWCFNVGSACSDAEIFYDAIRKG 212 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + I +I LGGG + Y V + + + + I EPG Sbjct: 213 REISDYAATLGFHFNYIDLGGGFSGDKDVSIEKYSVHINKALDEFYPDDKGLTIIAEPGR 272 Query: 236 AIVTNTTT-----LNTTVLDISENIKNLVIVDSSVEAHVPDYLL---YQESATIYPNTGP 287 T V + + + V + + Y+ Sbjct: 273 YYSAAAVTSVIPVHGKRVFRDATDQNKIDKVFYYFNDGIYGTFISAKYRNQPVNPIIWKK 332 Query: 288 -------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 Y++ + G +C D F + I D + FE+ Y FNG +P Sbjct: 333 RGDCGPAYSSTLFGPTCDGSDFFASDIQLPELDISDFVVFENQGAYARVHSCRFNGFCLP 392 Query: 341 T-IAVKNVD 348 + Sbjct: 393 KGVIFIRRS 401 >gi|117922115|ref|YP_871307.1| ornithine decarboxylase [Shewanella sp. ANA-3] gi|117614447|gb|ABK49901.1| ornithine decarboxylase [Shewanella sp. ANA-3] Length = 391 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 115/358 (32%), Gaps = 26/358 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+ +ID + D + A + A+K A + L +S+YE+ Sbjct: 30 TPFVVIDTSIIAKQYDDMVNSFPYAD--VYYAVKANPAAEILTLLKNKGSNFDIASIYEL 87 Query: 64 MLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + + +Y K + ++ + S+ + + A++ Sbjct: 88 DMVTNVGVTPDRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180 + + + + + + + G+ FH + + + + + Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLANELGLEPFGISFHVGSQQRDIGAWDSAIG 206 Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230 ++ F ++ I++GGG D + LKE QI Sbjct: 207 KVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285 LEPG ++++N L + V+ IS+ + + + Sbjct: 267 LEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIFTHKQ 326 Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 G ++ G +C + DI E + + IGDR+ + Y FNG Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384 >gi|255714170|ref|XP_002553367.1| KLTH0D15114p [Lachancea thermotolerans] gi|238934747|emb|CAR22929.1| KLTH0D15114p [Lachancea thermotolerans] Length = 446 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 106/370 (28%), Gaps = 32/370 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + + V A+K + +TL + +S E+ + Sbjct: 73 FFVCDLGEVKRLYEHWHAMLPR--VHPFYAVKSNPDRQVLETLVKLGANFDCASKSEIEM 130 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K N D + K K ++ LRI Sbjct: 131 VLNLGVEPSRIIYANPCKASSFIRYAKNSDVRKSTFDNVEELAKIKKYHPESELLLRIAT 190 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S ++ L+ K++ N+ G+ FH F F +++ + Sbjct: 191 DDSTAQCRLSTKYGCEMEGVGSLLAKVKELGLNLVGVSFHIGSGASDFGSFYKAVRDARQ 250 Query: 185 EF-----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238 F + + + + +GGG L+EF I EPG Sbjct: 251 VFDLARERYGLQNVHILDIGGGFQLDSFAESSAVLNAALEEFFPLGSGTDIIAEPGRFFA 310 Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT--- 285 + TL V+ + N ++ + H + Sbjct: 311 ASPFTLACHVIAKRAHDEKESMLYINDGVYGNMNCILFDHQKPTPRVLYHNQQFQYWDFE 370 Query: 286 ---------GPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + G +C D E++ + + +GD + F + Y + FN Sbjct: 371 SSSSTANAQCQHKVSIWGPTCDGLDCITSEYYLKHDLVVGDWLYFPVLGAYTSSAATQFN 430 Query: 336 GINMPTIAVK 345 G + Sbjct: 431 GFEQVADVIY 440 >gi|209544203|ref|YP_002276432.1| Orn/DAP/Arg decarboxylase 2 [Gluconacetobacter diazotrophicus PAl 5] gi|209531880|gb|ACI51817.1| Orn/DAP/Arg decarboxylase 2 [Gluconacetobacter diazotrophicus PAl 5] Length = 376 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 105/357 (29%), Gaps = 27/357 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++D ++ + + ++ A+K A + L ++S E+ Sbjct: 16 TPCLVVDVDRVEARYQSLRAVLPL--ARIYYAVKANPAPAILRRLVSLGSAFDAASWEEI 73 Query: 64 MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 L G ++ A + F+++ +L K A L Sbjct: 74 RLCLAAGAAGADISFGNTVKKASAIAQAHQAGVTMFAFDSIEELEKLARHAPGSRVYCRL 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + + S + + GL FH + S + A + Sbjct: 134 IVENEGAEWPLSRKFGTTLDSARDLMLRARDMGLDP--YGLSFHVGSQQTSTDAYEAAIA 191 Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYL 231 + F + ++LGGG ++ + + E ++ + Sbjct: 192 RVGMLFTDLAAAGLNLRMVNLGGGFPIRYREDVPEIDRFAVAISHAMTEHFGNDLPEMIV 251 Query: 232 EPGEAIVTNTTTLNTTVLDI----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 EPG IV + +++ V+ + ++ V +D + + I Sbjct: 252 EPGRFIVGDAGVVSSEVVLVTRRGQQDGPRWVYLDIGRFGGLAETEGESIRYGIRTPHDG 311 Query: 288 YT---AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINR-KNWFNGI 337 + G +C DI E + + GDRI Y FNG Sbjct: 312 SPAGRVAIAGPTCDGADIMYEKAPYALPLDLACGDRIELLSTGAYVSTYCSTSFNGF 368 >gi|329888519|ref|ZP_08267117.1| lysine/ornithine decarboxylase [Brevundimonas diminuta ATCC 11568] gi|328847075|gb|EGF96637.1| lysine/ornithine decarboxylase [Brevundimonas diminuta ATCC 11568] Length = 398 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 95/347 (27%), Gaps = 21/347 (6%) Query: 20 TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVMLGHEKFGGETHAYN 78 A + + N + A+K + + + L + +SL E+ L A+ Sbjct: 9 AAQWFQDNLKADVFYAVKANPSRWIIEVLVENGVNAFDVASLAEIELVRSVSPNARLAFM 68 Query: 79 VAYKDCEID---AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILAD 135 K T + ++ +L+K + + + L + VS + Sbjct: 69 HPVKSRGAIKAAYADHGVRTFVLDSHDELDKILE-STGHADDLNLIVRMGVSADGAAYS- 126 Query: 136 PNRPFSRLGEKCKDKIESEIKNVN----GLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT 191 + F ++ +++ V G+ FH + + A + + + Sbjct: 127 LSGKFGVSPDQAPALLQATRHAVKDGQMGVSFHVGSQCMRPSAYEAAMTQVGRAIKKAGV 186 Query: 192 QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 ++ + +GGG D + ++ E E L + Sbjct: 187 FVDIVDVGGGFPSVYPGMVPPDLSEYADAIHRGFNEMPVSETTELWCEPGRALVAEASSV 246 Query: 252 SENIKNLVIVDSSVEA-----HVPDYLLYQESATIYPNTGP-----YTAMVCGRSCLAGD 301 + + T G G +C + D Sbjct: 247 LCRVDLRKGDALYLNDGSYGSLFDATHSRWPFPTKLVRDGESSSELKPYRFYGPTCDSID 306 Query: 302 IF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 G F V+ GD I + Y + FNG IA Sbjct: 307 HMPGPFWLPADVQEGDFIEIGMMGAYGVAMSTGFNGYGEHEIAAVED 353 >gi|55978175|gb|AAV68696.1| LolD-2 [Neotyphodium uncinatum] Length = 415 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 97/364 (26%), Gaps = 36/364 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ V A+K + TL G +S E+ L Sbjct: 33 FFVADLNDVVRKWAAWKEAL--PDVTPFFAVKSSYDRRLIQTLATCGAGFDCASTEEIEL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122 G E + K + I F+ +L K + + + Sbjct: 91 ILSLGIGAERIIFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHHHYPEAQTVLRVFA 150 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH----NNCENKSFLCFSAM 178 + + G ++ + G FH + +++ Sbjct: 151 DDPTNADPLGTKFGAARDDFDG--LVRLVKELNMQLAGASFHAAPSVAVDAAAYVRGIRD 208 Query: 179 LKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + + +GGG + K + ++I EPG Sbjct: 209 TAEVFARARQVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFKSEVGEGRLRILAEPG 268 Query: 235 EAIVTNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQE 277 + L V L I++ I + ++ V + +E Sbjct: 269 TLFSCSPFYLAVKVVARRVNATAFGHEPATRLYINDGIYSNFMMRFIVNMTFSPAAVIRE 328 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINRKNW 333 + GRSC + D V++GD + F+D+ Y Sbjct: 329 GVWHDQADHTMRGEACSLWGRSCDSNDCINRDCRLGPEVRVGDWLVFKDMGAYTTVCNTT 388 Query: 334 FNGI 337 FNG Sbjct: 389 FNGF 392 >gi|239943147|ref|ZP_04695084.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 15998] gi|239989605|ref|ZP_04710269.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 11379] gi|291446623|ref|ZP_06586013.1| decarboxylase [Streptomyces roseosporus NRRL 15998] gi|291349570|gb|EFE76474.1| decarboxylase [Streptomyces roseosporus NRRL 15998] Length = 442 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 49/403 (12%), Positives = 98/403 (24%), Gaps = 51/403 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ D + + L +LK + L + SS E Sbjct: 18 GSPLYVYDLDETEAAARSLRGALPQP-STLYYSLKANPHPLLARALRRAGCHAEVSSQGE 76 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E F G+ Y K A + + + A + Sbjct: 77 LAAALEAGFAGDEILYTGPGKTRLEIADAVCAGVLRFSVESAGDYRRVAAVAAERGVTAQ 136 Query: 120 LRINPSVSY-SKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCENKS 171 + + S S+ G + V G+ F + Sbjct: 137 CLLRLNASESHGSSGLRMTGTSSQFGTDSAAVIADPEQFAPRPGARVIGMHFFALSNARD 196 Query: 172 FL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 + + + + ++ LGGG + L+ + Sbjct: 197 PESLLASLVSSIAEAARVHQACGVPLAYVDLGGGFAAPYAAEGARPDYGALREPLEAALD 256 Query: 224 KYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-------- 268 ++ E G +V L TV DI ++ + +V + H Sbjct: 257 EHLPDWRNGTTTIAFESGRHLVGGCGQLVCTVSDIKQSRERTYVVLDTGIHHLGGLAGLG 316 Query: 269 ----VPDYLLYQES------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 + + + + A++ G C D+ V + Sbjct: 317 RLLPMRASTVPARTGGVPGEPDVPYGAADDRAVLVGPLCTPADVLARDASLPRVGRDGLL 376 Query: 319 SFEDVAGYNINRK-NWFNGINMPTIAVKNVD-----GTIKAIR 355 + +V Y + F + V I+ R Sbjct: 377 TVPNVGAYGLTASLIGFLSRPVAAEIVLAAGATLDASRIELRR 419 >gi|144897787|emb|CAM74651.1| Ornithine decarboxylase [Magnetospirillum gryphiswaldense MSR-1] Length = 376 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 106/332 (31%), Gaps = 27/332 (8%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDA 88 ++ A+K A + L +S EV L E + ++ K A Sbjct: 40 AQVYYAVKANPAPEIIRMLVGLGSSFDVASRGEVDLCLENGARADNISFGNTIKKQSDIA 99 Query: 89 VLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEK 146 F++ ++L K + A + + + L+ + + Sbjct: 100 YAYSKGVRLYAFDSEAELEKLAESAPGSRVFCRILMTCDGAEW--PLSRKFGCEIEMAKD 157 Query: 147 CKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIH 203 K + G+ FH + + + F ++ ++LGGG Sbjct: 158 LLVKARELGMDPYGVSFHVGSQQTDLNQWDIAVGKAAMLFTALNEAGIDLKMMNLGGGFP 217 Query: 204 FTDKDY--PVKDFCQRLKEFSEKYS----VQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 + V+ + + + + +EPG ++V + L V+ IS+ + Sbjct: 218 AKYRTDIPAVERYADAVMHAMTNHFGNALPAMIIEPGRSLVGDAGVLEAEVVLISKKSYD 277 Query: 258 LVIVDSSVE--------AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE---F 306 + ++ + + + Y+ T ++ G +C + DI E + Sbjct: 278 EDVRWVYLDIGKFGGLAETMDEAIKYR-IQTPRDGEETAPVVLAGPTCDSADILYEKAGY 336 Query: 307 HFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 +K+GD++ Y + FNG Sbjct: 337 EMPVTLKVGDKVRILSTGAYTTSYSAVNFNGF 368 >gi|189426082|ref|YP_001953259.1| diaminopimelate decarboxylase [Geobacter lovleyi SZ] gi|189422341|gb|ACD96739.1| Diaminopimelate decarboxylase [Geobacter lovleyi SZ] Length = 439 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 125/400 (31%), Gaps = 46/400 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D++ + N+ + L + G+ + A+K + + + SSL E Sbjct: 24 GTPIYLHDQEYIENSCEQLLNMPNAFGLHVRYAMKANSDRTVLRVVTGKGLDLDCSSLDE 83 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI-----DAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 H +A++ ++ Q N D A+ Sbjct: 84 AARAHAAGIPFSRMMLTTQEVPGGDERAELEAMIKAGLKYNVCSMLQFNLIADFAKANRI 143 Query: 117 KIGLRINP-----SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN-K 170 + +R++P S ++ ++ + L + K K ++ K + H + + Sbjct: 144 DLSMRVHPGAAGGGESATRDTGSEYSCFGVHLNDVPKVKAMADEKGLRFTQVHVHIGSGG 203 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--- 227 + + + +S GGG+ + L ++++ Sbjct: 204 DPEKWRQNIDRELGFVKTYFPDATTVSFGGGLKVARMPGEKQADIASLGAYAKQRIEEFK 263 Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA 279 Q+ +EPG +V N+ + T ++D + ++ + L E Sbjct: 264 AETGRELQMEIEPGTFVVANSGHIITRIIDKKLTNELNFLIVDGGMELLTRPLLYGSEHP 323 Query: 280 ---------------TIYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDR 317 P G + + GR C +GD +IGD Sbjct: 324 VSIVRQDGTLLSSEYDQAPAQGLKSFGIVGRCCESGDSVRLDNDGNIVPVLIAEPEIGDY 383 Query: 318 ISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIRE 356 + Y+ + +N P +K G + IR+ Sbjct: 384 VVIGGTGAYSESMSPENYNSHRKPGAVMKTKSGELVQIRK 423 >gi|71280920|ref|YP_269410.1| Orn/DAP/Arg decarboxylase family protein [Colwellia psychrerythraea 34H] gi|71146660|gb|AAZ27133.1| Orn/DAP/Arg decarboxylase, family 2 [Colwellia psychrerythraea 34H] Length = 425 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 64/401 (15%), Positives = 119/401 (29%), Gaps = 43/401 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 ++D L ++ A A+K A + + L +Y G +S E+++ Sbjct: 26 VMDLDGLKKTVNDAYAAFPANFFHT-FAVKANALVKVLEPLREYGMGAEVASPGELLIAV 84 Query: 68 -EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKA---QKLHKKIGLRI 122 F E ++ K + + + + +L + + IG R+ Sbjct: 85 TAGFTAENIIFDSPAKTLQDLRTCIKKGIALNIDNLQELERIDALMLEFPESTSIIGFRV 144 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE----NK 170 NP + K S+ G D I + + + H+ + + Sbjct: 145 NPQIGGGKIGSTSTATATSKFGYALVDGDNRNELISIYKKRPWLKSIHTHSGSQGCELSL 204 Query: 171 SFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDY-------PVKDFCQRLKEFS 222 + + E+ Q I + +GGG+ D + Sbjct: 205 MAKGIKIITELAEEINSLVGLQQITRLDIGGGLPVNFSSEIIKPSFKDYADILKAEVPLL 264 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS------SVEAHVPDYLLYQ 276 Q+ E G AIV + T V + + + A +P + Sbjct: 265 FTDKYQVKTEFGRAIVAKNGVIITRVEYTKNSGGRHIATTHAGAQIITRTAFLPKSWPIR 324 Query: 277 ESATIYPNTGP-------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + T V G C AGD+ ++ D + D GY Sbjct: 325 VTGYTTKGEERTAQTSEVVTTDVAGPCCFAGDLICSNQPLPKLESNDYVMVHDTGGYYFT 384 Query: 330 RKNWFNGINMPTIAVK---NVDGTIKAIRE-FSYNDYYNNL 366 +N + I + D TI+ IR+ S D N + Sbjct: 385 NHFDYNSLPRVAIYTVAGHDDDLTIECIRQGESLEDVLNKM 425 >gi|328717376|ref|XP_001952703.2| PREDICTED: ornithine decarboxylase-like [Acyrthosiphon pisum] Length = 444 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 117/363 (32%), Gaps = 26/363 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ D L+N ++ +K VK A+KC + + + L+ + +S E+ Sbjct: 35 PFYIFDIGDLVN--KAIIWQQKLPRVKPFYAVKCNDSSLVLEILSAFGTNFDCASKVEIK 92 Query: 65 LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + A+ D F+ +L K K + I +R Sbjct: 93 KVLDLGVNPSRLIFANPAKMASHIKYAMSKCVDLTTFDNKLELYKIKSLHPSCNLVIRIR 152 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + + P + +V G+ FH F + Sbjct: 153 CDATEAQCPLGIKYGCDPLTEAP-SLMALARDLGLSVVGVSFHVGSGCNEPAAFQRAIAA 211 Query: 182 IEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLE 232 F + +++GGG K+ + + + +++ I E Sbjct: 212 SAGIFQLAQELGFMNMYLLNIGGGFPGN-KNTSLDKIANIVNDALDEWFPPNNGVTIIAE 270 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL-YQESATIYPNTGPYTAM 291 PG V + TL T + I + N + + V ++ Y Sbjct: 271 PGRYFVASAFTLATKIHSIKKRSNNESHIMYFINDGVYGSFNSILYDHSVIVPKSLYDYS 330 Query: 292 ---------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + G +C D +F +K+ D I+FE++ Y I FNG +P + Sbjct: 331 RSRPICESSIWGPTCDGLDKVVDFVNMPLLKMDDWITFENMGAYTIPIACTFNGFPLPKV 390 Query: 343 AVK 345 Sbjct: 391 FAV 393 >gi|300175269|emb|CBK20580.2| Diaminopimelate decarboxylase [Blastocystis hominis] Length = 436 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 129/391 (32%), Gaps = 43/391 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 ID LL N++ K A+K + + ++ G +S E+ + E Sbjct: 33 IDSGVLLENMNEIKEAFPEPFFKHRYAIKANPIKKLIRFIGEHGFGVECASFEELSIALE 92 Query: 69 -KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNK-------FKDKAQKLHKKIG 119 Y+ + ++ + I F+ + ++ + + + L IG Sbjct: 93 SGIPASEIVYDFPLKRKHDLQFCFEHGIHINFDNLQEMEMGYNLYRSLESEGKVLRGSIG 152 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENKSF 172 +RIN P S+ G KD + ++ VNGL H + Sbjct: 153 VRINSQYGVGAIEATSTAAPTSKFGVPIKDTDYNELLGLFAKWPEVNGLHSHVGSQGIDL 212 Query: 173 LCFSAMLKNIEKEFGH-----FITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSE 223 +K I QI + +GGG+ K ++ + ++L+ Sbjct: 213 SSMVNGVKFILDLADRLNRDLHRKQITVLDIGGGLPVDYKSDCSNHMPLHYAEQLRAKVP 272 Query: 224 KYS---VQIYLEPGEAIVTNTTTLNTTVLD------ISENIKNLVIVDSSVEAHVPDYLL 274 + + E G +V + + V + I + E ++P Sbjct: 273 RLFSGEFTVITENGRWVVATSGWFVSRVEYTKIAGGVLVGITHAGGNMFVREVYMPSTWS 332 Query: 275 YQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + S TA + G C +GD+ + + GD + + A Y+I+ Sbjct: 333 HPISVYDRDGGKKRDNVRTASIAGPLCFSGDLIAKEVPLPAFEQGDFVVYHHTAAYSISM 392 Query: 331 KNWFNGINMPTIAVKN---VDGTIKA--IRE 356 + +N I+ P + + +G + I+ Sbjct: 393 YSIYNCISAPPAFMYSVKADNGEVDVCCIKR 423 >gi|148285652|gb|ABQ57519.1| LolD [Neotyphodium coenophialum] Length = 415 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 97/364 (26%), Gaps = 36/364 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ V A+K + TL G +S E+ L Sbjct: 33 FFVADLNDVVRKWAAWKEAL--PDVTPFFAVKSSYDRRLIQTLATCGAGFDCASTEEIEL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122 G E + K + I F+ +L K + + + Sbjct: 91 ILSLGIGAERIIFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHHHYPEAQTVLRVFA 150 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH----NNCENKSFLCFSAM 178 + + G ++ + G FH + +++ Sbjct: 151 DDPTNADPLGTKFGAARDDFDG--LVRLVKELNMQLAGASFHAAPSVAVDAAAYVRGIRD 208 Query: 179 LKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + + +GGG + K + ++I EPG Sbjct: 209 AAEVFARARQVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFKSEVGEGRLRILAEPG 268 Query: 235 EAIVTNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQE 277 + L V L I++ I + ++ V + +E Sbjct: 269 TLFSCSPFYLAVKVVARRVNATAFGHEPATRLYINDGIYSNFMMRFIVNMTFSPAAVIRE 328 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINRKNW 333 + GRSC + D V++GD + F+D+ Y Sbjct: 329 GVWHDQADHTMRGEACSLWGRSCDSNDCINRDCRLGPEVRVGDWLVFKDMGAYTTVCNTT 388 Query: 334 FNGI 337 FNG Sbjct: 389 FNGF 392 >gi|208780155|ref|ZP_03247498.1| pyridoxal-dependent decarboxylase, C- sheet domain protein [Francisella novicida FTG] gi|208744159|gb|EDZ90460.1| pyridoxal-dependent decarboxylase, C- sheet domain protein [Francisella novicida FTG] Length = 403 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 52/380 (13%), Positives = 107/380 (28%), Gaps = 33/380 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D L + + VKL ALK + ++ +S+ E+ Sbjct: 20 PFFYYDLDMLEAHAKELHRL----PVKLWYALKANPLSRIIKVFDEQKISFDVASIGELD 75 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119 + + K + +++Q + +K + + Sbjct: 76 QVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSNLVEKKNINVKVL 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171 LR+ + + + + G D + S ++ G+ Sbjct: 136 LRVQLVWNDQENNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIGMHCFQWGNILC 195 Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 S + + K ++ I LGGGI L K Sbjct: 196 LNKLSQIWEITTKALLDLSEAINVSLKVIDLGGGIGVPYNAGQKSISINDLIFCFNKLKK 255 Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATI 281 ++ +LE G V + T ++D ++V H+ L + Sbjct: 256 EFPDIEYWLELGRYAVAESGVYVTKIVDRKSVNNIDLLVTDGGAQHLVRPALTGESFPIQ 315 Query: 282 YPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 + G C + D G K + + D + F+ Y F Sbjct: 316 LLREEACGETNDFQIHGPLCTSLDKAGIASLPKDIGLNDYLIFKQTGAYGFTESMPLFLC 375 Query: 337 INMPTIAVKNVDGTIKAIRE 356 N+P + G ++ +R+ Sbjct: 376 HNLPAEVIFYK-GQLQTVRQ 394 >gi|78221443|ref|YP_383190.1| diaminopimelate decarboxylase [Geobacter metallireducens GS-15] gi|78192698|gb|ABB30465.1| diaminopimelate decarboxylase [Geobacter metallireducens GS-15] Length = 439 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 57/401 (14%), Positives = 114/401 (28%), Gaps = 48/401 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D+Q + N+ D L + G+ + A+K + + + SSL E Sbjct: 24 GTPIYLHDQQYIENSCDQLLAMPNAYGLHVRYAIKANSDRTVLRIVTGKGLDLDCSSLDE 83 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI-----DAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 H +A++ + Q D A + Sbjct: 84 AARAHAAGIPYSRMMLTTQEVPTGEERTELEAMIKVGLKYNVCSTLQYQLIADFAAQNKI 143 Query: 117 KIGLRINPSVSYSKFILADPNRPF-SRLGEKCKD------KIESEIKNVNGLMFHNNCEN 169 + +R++P + S G +D + + + H Sbjct: 144 DLSMRVHPGAAGGGESATRDTGSEYSCFGVHLRDVPTVKALADEKGLRFTQVHVHIGSG- 202 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + + + + +S GGG+ + L ++++ Sbjct: 203 GAPEKWQENIDRELGFIKTYFPDAVTVSFGGGLKVARMPGEKQADIATLGAYAKQRIEEF 262 Query: 228 --------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQES 278 + +EPG +V N+ + T ++D + ++ + L E Sbjct: 263 KAATGRELMMEIEPGTFVVANSGHIVTRIIDKKFTNEMNFLIVDGGMELLTRPLLYGSEH 322 Query: 279 A---------------TIYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGD 316 P G + GR C +GD +IGD Sbjct: 323 PIAIVRQDGTLLSSEYDQTPTAGLKPFGIVGRCCESGDSVRLDKEGNIVPVMIVEPEIGD 382 Query: 317 RISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIRE 356 + Y+ + +N P ++ G + IR+ Sbjct: 383 YVVIGGTGAYSESMSPENYNSHRKPGAVMRTKTGELVLIRK 423 >gi|254375090|ref|ZP_04990570.1| hypothetical protein FTDG_01279 [Francisella novicida GA99-3548] gi|151572808|gb|EDN38462.1| hypothetical protein FTDG_01279 [Francisella novicida GA99-3548] Length = 403 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 53/380 (13%), Positives = 105/380 (27%), Gaps = 33/380 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D L + + VKL ALK + ++ +S+ E+ Sbjct: 20 PFFYYDLDMLEAHAKELHRL----PVKLWYALKANPLSRIIKVFDEQKISFDVASIGELD 75 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119 + + K + +++Q + +K + + Sbjct: 76 QVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSNLVEKKNINVKVL 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171 LR+ + + G D + S ++ G+ Sbjct: 136 LRVQLVWDDQGGNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIGMHCFQWGNILC 195 Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 S + + K +E I LGGGI L K Sbjct: 196 LNKLSQIWEITTKALLDLSEAINVSLEVIDLGGGIGVPYNAEQKSISINDLIFCFNKLKK 255 Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATI 281 ++ +LE G V + T ++D ++V H+ L + Sbjct: 256 EFPDIEYWLELGRYAVAESGVYVTKIVDRKSVNNIDLLVTDGGAQHLVRPALTGESFPIQ 315 Query: 282 Y----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 + + G C + D G K + D + F+ Y F Sbjct: 316 LLREESCSETNDFQIHGPLCTSLDKAGIASLPKDTGLNDYLIFKQTGAYGFTESMPLFLC 375 Query: 337 INMPTIAVKNVDGTIKAIRE 356 N+P + G ++ +R+ Sbjct: 376 HNLPAEVIFYK-GQLQTVRQ 394 >gi|241667667|ref|ZP_04755245.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876212|ref|ZP_05248922.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842233|gb|EET20647.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 403 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 57/381 (14%), Positives = 111/381 (29%), Gaps = 33/381 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P++ D L + + VKL ALK + ++ +S+ E+ Sbjct: 19 SPFFYYDLDMLEAHAKELKKL----PVKLWYALKANPLSRIIKIFDEQKISFDVASIGEL 74 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKK--I 118 + E + K + +++Q D ++ + K I Sbjct: 75 DQVLDQGVNPENILHTGPAKSYSQLEYFLAQGVRIFVIESINQFRDLSDLVERKNIKVEI 134 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENK 170 LR+ + + + + G D + S ++ G+ Sbjct: 135 LLRVQLVWNDQESNVLGGGGCVTPFGLSMNDWKDFFNSSPSISNNMSIIGMHCFQWGNIL 194 Query: 171 SFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 S + K I K ++ I LGGGI L Sbjct: 195 CLDKLSQIWKTITKALLDLSEAINVSLKIIDLGGGIGVPYNSSQKAVSINDLISCFNNLK 254 Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESAT 280 ++ +LE G V + T V+D ++V H+ L + Sbjct: 255 KEFPDIEYWLELGRYAVAESGVYLTKVVDRKSVNNINLLVTDGGAQHLVRPALTGESFPI 314 Query: 281 IY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FN 335 + + G C + D G K + + D + F+ Y F Sbjct: 315 ELLREESCSETNDFQIHGPLCTSLDKAGIASLPKDIGLNDYLIFKQTGAYGFTESMPFFL 374 Query: 336 GINMPTIAVKNVDGTIKAIRE 356 N+P + G ++ +R+ Sbjct: 375 CHNLPAEIIFYK-GHLQTVRQ 394 >gi|91791946|ref|YP_561597.1| Orn/DAP/Arg decarboxylase 2 [Shewanella denitrificans OS217] gi|91713948|gb|ABE53874.1| Orn/DAP/Arg decarboxylase 2 [Shewanella denitrificans OS217] Length = 405 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 54/376 (14%), Positives = 108/376 (28%), Gaps = 33/376 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D +L ++ T V A+K + + L ++ G +S+ E+ Sbjct: 20 AFIYDLDQLSAHIRTMTSRLPK-QVDCYYAIKANSDSAILRALLPHVYGFEVASMGEIEK 78 Query: 66 GHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 A+ K A+ N + QL + A++ ++ + + Sbjct: 79 VRAISQNVPIAFGGPGKTITELTRALTLNVQLYHLESELQLARLNQLAKEQNQLVRCLLR 138 Query: 124 PSVSYS-KFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN----KS 171 + + ++ G ++ + + V GL FH N K Sbjct: 139 VNPYFDLPSATLQMAGQATQFGIDERELLALLPRLGDYPNIQVEGLHFHCLSNNLDAVKH 198 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSV- 227 L+ F +++GGGI T + ++ + ++L Y Sbjct: 199 VTLVRHYLQTASTWAAQFGLTWTTVNIGGGIGVTYQGETEFDFPLYAEQLTLLCRDYPQL 258 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG 286 + E G I + T V DI + V H Sbjct: 259 HLATECGRYISADCGVYLTEVTDIKLSHNEYFAVLRGGTHHFRLPSSWQHSHPFKIYPRE 318 Query: 287 PYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW- 333 + +CG C D+ + +K+ D I F+ Y + + Sbjct: 319 TWHYPFTRPSVTDTAITLCGELCTPKDVLAKNVHVAQLKVADVIVFQKAGAYGWHISHHD 378 Query: 334 FNGINMPTIAVKNVDG 349 F P + Sbjct: 379 FLSHPHPQRLYIKENQ 394 >gi|255306837|ref|ZP_05351008.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile ATCC 43255] Length = 403 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 130/394 (32%), Gaps = 51/394 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D+ ++ G L ++K + ++ + G +SS EVM Sbjct: 15 PCYIYDETNIIEKCKELKN--NILGFDFLYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 72 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E + Y+ K + + II ++++++ ++K ++K+ + I Sbjct: 73 ISSECGVSKDDIYYSSPGKTEIDIETVLDKCIIIADSITEVELINKISKKYNQKVKIGIR 132 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCFS 176 + F + D + S+ G +D + +V G+ H + F Sbjct: 133 INPD---FTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDFEKLG 189 Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSE------- 223 + IE+I+ G G+ + + + K + Sbjct: 190 HYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIAFTNSN 249 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD----------- 271 ++ +E G IV + ++DI + K +IV + + + Sbjct: 250 TLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIENITC 309 Query: 272 -----------YLLYQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + S ++ N V G C + D+ K IGD IS Sbjct: 310 GVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLKKANIGDLIS 369 Query: 320 FEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352 + Y+ + F+ +P K DG I+ Sbjct: 370 ISNAGSYSYSLSPLLFSSYELPKQYYKRKDGYIE 403 >gi|297161700|gb|ADI11412.1| diaminopimelate decarboxylase [Streptomyces bingchenggensis BCW-1] Length = 408 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 49/372 (13%), Positives = 100/372 (26%), Gaps = 37/372 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D L + + V+L A K A + L ++ G SS E Sbjct: 27 PAYVYDLTALAEHAEAVRAALP-PAVELYYAAKANPALEILRALAPHVTGYEVSSGGESA 85 Query: 65 LGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E A+ K A+ + + +L + A + + + + + Sbjct: 86 HVREAVPAHPLAFGGPGKTEAELRRALKLGVERFHVESEHELRQLAALADEEGRTVDILL 145 Query: 123 NPSVSYSKFILADPNR------------PFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 ++ + L P + G+ H Sbjct: 146 RVNLPVADDALGAAALAMGGRPSPFGLDPDHIAERCLPLLTPGGPLRLRGIHAHLASGLD 205 Query: 171 SF---LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + + + ++ +++GGG+ + + + Sbjct: 206 APALLAVATRITDWTRNLSARHGLRLTEVNVGGGMSVDYDRPDSRFDWAAYGRGLAEVAE 265 Query: 228 Q-----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQ----- 276 + + +EPG A+ T VLD+ + V H+ Sbjct: 266 RNPELTLRIEPGRALTVYCGWYVTEVLDLKHSGGEPFAVLRGGTHHMRTPAAKGHDHPFA 325 Query: 277 -------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 P + G+ C D+ +++GDR++F Y N Sbjct: 326 VLPADTWTHPWPRPGVRDEPVTLVGQLCTPKDVLARRAPAGELRVGDRVAFALAGAYAWN 385 Query: 330 RKNW-FNGINMP 340 + F P Sbjct: 386 ISHHDFLMHPRP 397 >gi|238059466|ref|ZP_04604175.1| diaminopimelate decarboxylase [Micromonospora sp. ATCC 39149] gi|237881277|gb|EEP70105.1| diaminopimelate decarboxylase [Micromonospora sp. ATCC 39149] Length = 429 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 95/349 (27%), Gaps = 31/349 (8%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAV 89 K+ A+K + + L ++DG +S E L K + Sbjct: 62 AKVCYAVKANSYRPVVAALAGHVDGFEVASAAEATLARSVRPDGLLVAAGPAKSDTLLRH 121 Query: 90 --LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVS--------YSKFILADPNRP 139 D I ++ +L + A +L + + + + + P Sbjct: 122 LIAHGVDMINVESLHELRRVDRIAAELDQPVAVTLRVNPRRVAVAGALAMGGKATQFGIP 181 Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCEN----KSFLCFSAMLKNIEKEFGHFITQIEW 195 + + E + +V G H N L+ + Q+ Sbjct: 182 EADVPEVLEQARALRRTDVVGFHLHVVGNNLDAATHVAYLRWCLQFAQDTAARHGVQLRV 241 Query: 196 ISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252 + +GGGI + + V+ F + + + Q+ LEPG +VT+ VLD+ Sbjct: 242 VDIGGGIGVSFGRGPHFDVRRFGELVADVRPPADCQVVLEPGRYLVTDCGWYAAEVLDVK 301 Query: 253 ENIKNLVIV-DSSVEAHVPDYLLY------------QESATIYPNTGPYTAMVCGRSCLA 299 +V + P V G C Sbjct: 302 HAYGTWFVVLRGGINHFALPVSWDILHPFTVVPVARWPYPWPRPEVRDAPVTVVGELCTT 361 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNV 347 D V+ GD + F D Y F G + Sbjct: 362 EDTLVRDMTVDRVRAGDLVVFPDAGSYGWEFALPEFLGHPRAERWTLDS 410 >gi|262197919|ref|YP_003269128.1| Orn/DAP/Arg decarboxylase 2 [Haliangium ochraceum DSM 14365] gi|262081266|gb|ACY17235.1| Orn/DAP/Arg decarboxylase 2 [Haliangium ochraceum DSM 14365] Length = 582 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 60/379 (15%), Positives = 119/379 (31%), Gaps = 29/379 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ + L +N A ++ +K + + + + + +SL E+ L Sbjct: 40 VWVLHECALRDNFAAWRE-LAGAAERICYPVKTNPSPAVLERIAAWGGRAECASLAELQL 98 Query: 66 GH-EKFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK------- 116 F + Y + ++ L + T++ ++ L ++A + Sbjct: 99 ARLAGFSEQRLLYGSPALNLQVAWSLLEDGGTVVVDSAEALASLDERASRAPALPPGRVL 158 Query: 117 ---KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCEN 169 + I + L + G ++ IE + GL H + Sbjct: 159 LRVNPSISIRYRKTQPWTDLIAHASQRGKFGIPSEEIIELVSGLRALRICGLHAHVGTQM 218 Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFS 222 F ++ + + + LGGG+ +D+P + E Sbjct: 219 DHIEPFAILAEHLIALADAITERSAQPLSILDLGGGLGIPCTAAEDFPRIAALAPVTEMV 278 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + +LEPG A+V NT L + + + + + L Q I Sbjct: 279 ANSGREAWLEPGSAMVGNTVGLLAAIASVKTMRDRRWAIADAGTDQLVKITLSQWYHQIL 338 Query: 283 PNTGPYTAM-----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 G M + G C +GD+ ++ GD I + Y N FNG Sbjct: 339 GPDGQPLPMQGDDALGGPLCFSGDVLLPATEVSGLRPGDPIFVQHTGAYFAAIANRFNGR 398 Query: 338 NMPTIAVKNVDGTIKAIRE 356 V DG+ + I Sbjct: 399 RPGGTVVIRADGSAERIHR 417 >gi|310827389|ref|YP_003959746.1| putative pyridoxal-dependent decarboxylase [Eubacterium limosum KIST612] gi|308739123|gb|ADO36783.1| putative pyridoxal-dependent decarboxylase [Eubacterium limosum KIST612] Length = 407 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 59/387 (15%), Positives = 128/387 (33%), Gaps = 32/387 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +YL+D ++ NN I + + K +N+ S E+ Sbjct: 19 FYLLDSEQFKNNFTELKNIFSAIYPNFNIAYSYKTNYTPKFCKIVNELGGYAEVVSEMEM 78 Query: 64 MLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + ++ L T+ +++ + + +D A + + + Sbjct: 79 ELALKCGVEPKRIIWNGPIKDSEKMREFLVAGGTVNSDSIDETKEIRDFANSVETILNVG 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--KNVNGLMFHNNCENKSFLCFSAML 179 I + F G+ K +E KN++ + FH + + + A Sbjct: 139 IRCNYDV--HDGVVSRFGFDITGDDFKRALEIVTTSKNLHFINFHCHFAKRQIEYWPARA 196 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS----------------E 223 K + F E I +GGG+ + F + ++ + Sbjct: 197 KGMINVLDQFGVIPERIDIGGGLFGKMPESLKAQFTADIPDYQAYAEVAAAVFAEYFNDK 256 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + ++ +EPG A+V + +V I + + ++ + I+ Sbjct: 257 EIKPELVIEPGSALVGDCMKFVGSVKTIKNVRGKYIATVLGSQKNISMAGINPPMEVIHM 316 Query: 284 NTGP--YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 N G + G +C+ GD+ + + + GD I + Y++ K F N P Sbjct: 317 NEGKQYENLDMVGFTCIEGDVLNKDY-CGELAAGDVIIINNCGSYSLVMKPPFILPNFPV 375 Query: 342 IAVKN-----VDGTIKAIREFSYNDYY 363 + + N +G R +++D + Sbjct: 376 VDICNMNIETGEGVELIKRGETFDDIF 402 >gi|283458340|ref|YP_003362962.1| diaminopimelate decarboxylase [Rothia mucilaginosa DY-18] gi|283134377|dbj|BAI65142.1| diaminopimelate decarboxylase [Rothia mucilaginosa DY-18] Length = 506 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 56/446 (12%), Positives = 117/446 (26%), Gaps = 84/446 (18%) Query: 3 KTPYYLIDK----QKLLNNLDTALYIRKNAGVKL--LLALKCFAAWGMFDTLNQYMDGTT 56 +TP Y+ + + G ++ A K F + + + Sbjct: 54 ETPQYVFSETTFRARARAYRTAFEQAFAEHGAQVSVYYAGKSFLSTAVARWATEEGLCLD 113 Query: 57 SSSLYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA-- 111 ++S E+ L + G A + K A+ + ++ ++V +L + Sbjct: 114 TASGGELALALRAQVPGANIALHGNNKSEAELARAIRNGLGRVVADSVDELKLIECVYAE 173 Query: 112 -----------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC------------K 148 + +RI P V S + G + Sbjct: 174 LAAERVAEGEEPYAPVPVLIRITPGVHASTHESIATAHEDQKFGMSLQPGTAALAGLDEE 233 Query: 149 DKIES-------------------EIKNVNGLMFHNNCENKSFLCFSAML----KNIEKE 185 + + + G+ H + F + + + Sbjct: 234 ELEHWGVESTDSYAALAAAILNATDSLDFRGIHCHIGSQIFEAEGFEQAATTALEFMNRL 293 Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFC-----------QRLKEFSEKYSVQIYLEPG 234 + + LGGG + E + EPG Sbjct: 294 NRDLGVTLPELDLGGGYGIGYTEADHPRSITEVTESIAASVAATCERLGMAIPHMSFEPG 353 Query: 235 EAIVTNTTTLNTTVLDISE----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 +I + TV I ++ V VD + + L + + N Sbjct: 354 RSISGPSGATLYTVGTIKNVSIEDENGEIRVRRYVSVDGGMSDNARPVLYESDYSVTLAN 413 Query: 285 TGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINM 339 P + V G+ C +GD+ + + ++ GD ++ Y + +N + Sbjct: 414 RAPAGEQVLSRVVGKHCESGDVVVRYCYLPADLQAGDILAVPATGAYCYVLGSNYNFLTR 473 Query: 340 PTIAVKNVDG-TIKAIREFSYNDYYN 364 P + + IR D Sbjct: 474 PPVIATAEGKPSRVMIRRQREEDMLA 499 >gi|222054242|ref|YP_002536604.1| Diaminopimelate decarboxylase [Geobacter sp. FRC-32] gi|221563531|gb|ACM19503.1| Diaminopimelate decarboxylase [Geobacter sp. FRC-32] Length = 439 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 56/410 (13%), Positives = 124/410 (30%), Gaps = 47/410 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D+ + N+ + L + G+ + A+K + + + SS+ E Sbjct: 24 GTPIYLHDQAYIENSCEQLLNMPNAYGLHVRYAMKANSDRTVLRVVTNKGLDLDCSSVDE 83 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 H + + ++ +++Q D A+ Sbjct: 84 AARAHAAGIPYSRMMLTTQEVPADEERAELESMIKAGLKYNVCSMTQFQLIADFAKANTI 143 Query: 117 KIGLRINP-----SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN-K 170 + +R++P S ++ ++ + L + K K + + + H + + Sbjct: 144 DLSIRVHPGAAGGGESATRDTGSEYSCFGVHLNDVPKVKALAAEQGLRFTQVHVHIGSGG 203 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-- 228 + + + +S GGG+ + L ++++ + Sbjct: 204 DPEKWRENIDRELGFVKTYFPDATTVSFGGGLKVARMPGEKQADIASLGAYAKQRIEEFK 263 Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA 279 + +EPG +V N+ + T ++D ++ + L E Sbjct: 264 AATGRELKMEIEPGTYVVANSGHIVTRIIDKKLTNGMNFLIVDGGMELLTRPLLYGSEHP 323 Query: 280 ---------------TIYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDR 317 P G + + GR C +GD +IGD Sbjct: 324 IAIVSQDSTLLSSEYDQTPTAGLKSFGIVGRCCESGDSVRLDKEGNIVPVMIIEPEIGDY 383 Query: 318 ISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIREFSY-NDYYNN 365 + Y+ + +N P +K G + IR+ + N Sbjct: 384 VVIGGTGAYSESMSPENYNSHRKPGAVMKTCSGELVLIRKKQVREQIFQN 433 >gi|297185888|gb|ADI24234.1| ornithine decarboxylase [Glomus intraradices] Length = 444 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 56/383 (14%), Positives = 103/383 (26%), Gaps = 53/383 (13%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ V+ A+KC + L G +S E+ Sbjct: 44 FFVADLGEIYRQHLRWKTYLPR--VEPFYAVKCNGDPMLLRLLAALGTGFDCASKNEIQT 101 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K S D + + K K ++ +RI Sbjct: 102 VLDMGVSPSNIIYANPCKQASFIRFASEHDVKMITFDNADELHKIKRLFPKAQLVIRILA 161 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L NV G+ FH + ++ Sbjct: 162 DDSKALIKLGAKFGASLNDTGFLLKTALELGLNVIGVSFHVGSGCYDENSYIDAIRRARF 221 Query: 185 EFG---HFITQIEWISLGGGI---HFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGE 235 F + +GGG H +D+ + L +K+ + EPG Sbjct: 222 VFNQASEMGFDFHLLDVGGGFSFSHKSDEGITFEKIAAVLGPAIDKHFPPNIRVIAEPGR 281 Query: 236 AIVTNTTTLNTTVL------------DISENIKNLVIVDSSVEAHVPDYLLYQ------- 276 T+ T V+ + + V ++ + H P ++ Y Sbjct: 282 YYAAPAFTIATHVIAKRTVCRDGNEEYVPSMNVDQSNVLATKDDH-PTFMYYINDGLYGS 340 Query: 277 -----ESATIYPN----------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIG 315 + Y + G +C + D + + +G Sbjct: 341 LYCILYDHQLVTPKVLTKGGSFLFGEILDEPEYNCFIWGPTCDSIDCVTKNGSLPELFLG 400 Query: 316 DRISFEDVAGYNINRKNWFNGIN 338 D + FED+ Y I FNG Sbjct: 401 DWLYFEDMGAYTIAAATKFNGFK 423 >gi|326436541|gb|EGD82111.1| ornithine decarboxylase [Salpingoeca sp. ATCC 50818] Length = 577 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 55/404 (13%), Positives = 100/404 (24%), Gaps = 67/404 (16%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++L D + V+ A+KC + + TL +SL E+ Sbjct: 104 FFLTDLGDVCRKHKRWQAHL--PMVEPFYAVKCNSDPAILGTLAALGANFDCASLGEIQA 161 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + K + ++ K + LR+ Sbjct: 162 ILNLGVSSDRVIFANPCKAIAHLRFAKQVGVRMMTFDNEFELLKIAKHYPGAALVLRVLA 221 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L + +V G+ FH F+ + Sbjct: 222 DDSRSACRLGLKFGADPAVTGHLLQLARQLGLDVVGVSFHVGSGATDARAFADAVARARA 281 Query: 185 EFGHF---ITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQ------- 228 F + +GGG D +D + L+ ++ Sbjct: 282 VFDEAAALGFSPHLLDVGGGFPGDDPAATPAAAVRFEDIARELRSAFAEHFPPSAVPGLR 341 Query: 229 IYLEPGEAIVTN------TTTLNTTVLDI------------------------------S 252 I EPG V + T V+D+ Sbjct: 342 IIAEPGWYYVASASSLAVCITSKRRVVDVTATTPTATTGATPTTPASNATPHPATEPPPK 401 Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP------------YTAMVCGRSCLAG 300 V S + D+ Q N P + + V G +C + Sbjct: 402 FMYYVNDGVYQSFNCIIFDHARVQAQVLYTGNGVPAMDDEHLAAAVLHESSVWGPTCDSI 461 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 D + +GD + F+++ Y + FNG + Sbjct: 462 DCVQASTMLPELDVGDWLVFDNMGAYTSCAASTFNGFALTKHVY 505 >gi|50546571|ref|XP_500755.1| YALI0B11330p [Yarrowia lipolytica] gi|17432156|emb|CAC80209.1| ornithine decarboxylase [Yarrowia lipolytica] gi|49646621|emb|CAG83002.1| YALI0B11330p [Yarrowia lipolytica] Length = 449 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 96/356 (26%), Gaps = 26/356 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D + + V A+KC + L G +S E+ Sbjct: 75 FFVADLGIVYSQFMRWSNCLPR--VTPFYAMKCNGDPKVLQLLAALGTGFDCASRNEIQT 132 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + Y K S+ + +K K+ LRI Sbjct: 133 ILDLGVSQDRIIYAHPCKVASYIRYASSVGVEKMVFDNAEELYKCAKYHPTAKLFLRIVT 192 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S + + + NV G+ FH F ++N ++ Sbjct: 193 DDSQSLCQFSVKYGAALENTQSLLQLAKDLGLNVAGVSFHVGSGAGDPNAFLDAVRNAKR 252 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-KEFSEKYSVQIYLEPGEAIVTN 240 F + + +GGG + L K F E+ V + EPG V+ Sbjct: 253 VFDQGAAIGMHLNTLDVGGGFSDDSFESSAAVLGDALDKYFPEESGVNLMAEPGRFFVSE 312 Query: 241 TTTLNTTVLDISENIKN-----------LVIVDSSVEAHVPDYL-------LYQESATIY 282 T+ + V+ ++ + H + Sbjct: 313 AFTIASHVIARRIIENQNKAMLYLNDGVYGNMNCILFDHQEPVPKVLTYQGKFMYGERYQ 372 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 V G +C D + + +GD + F Y + FNG Sbjct: 373 KQKSSQDVSVWGPTCDGIDCISKSCQLPVLLDVGDWMYFTSFGAYTVAASTTFNGF 428 >gi|126138518|ref|XP_001385782.1| ornithine decarboxylase [Scheffersomyces stipitis CBS 6054] gi|126093060|gb|ABN67753.1| ornithine decarboxylase [Scheffersomyces stipitis CBS 6054] Length = 458 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 56/382 (14%), Positives = 113/382 (29%), Gaps = 53/382 (13%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + +K V+ A+KC + L +S E+ Sbjct: 66 FFVCDLGEVYRSFGVWQ--QKLPQVQPHYAVKCNTNLEVIKLLASLGVNFDCASKNEIDT 123 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y K +N + + +L+K K I L Sbjct: 124 ILNLGISPDRIVYANPCKTNSFIRHASKANVNLTTVDNAQELHKLKKFHPDCGILIRLAT 183 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + + E + NV G+ FH K F +++ Sbjct: 184 DDETAQCRLSTKFGCTLSAAINELLP-LAKELGLNVRGVAFHVGSGAKDFDSIYKAIRDS 242 Query: 183 EKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLEP 233 F + ++ + +GGG D C L +F + ++ EP Sbjct: 243 RDVFNRAITEYGFEMSILDIGGGFELETFDESSSMVCSSLNKFFPADFVSQNGIKFIAEP 302 Query: 234 GEAIVTNTTTLNTTVL---------------------------DISENIKNLVIVDSSVE 266 G +V+N TL ++ + N+ ++ + + Sbjct: 303 GRFMVSNAFTLAAHIIARRDLDLKATFVSEEDKQVSAMVYINDGVYGNMNCILFDHQNPQ 362 Query: 267 AHVPDYLLYQESATIY----------PNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIG 315 AHV + G + + G +C D V++G Sbjct: 363 AHVLQHKNKFFYHQDEESDDQKLIDDDAKGEHHFSIWGPTCDGLDCVASKCTLSHDVEVG 422 Query: 316 DRISFEDVAGYNINRKNWFNGI 337 D + F ++ Y FNG+ Sbjct: 423 DWLYFPNLGAYTSAATTAFNGL 444 >gi|217971695|ref|YP_002356446.1| Diaminopimelate decarboxylase [Shewanella baltica OS223] gi|217496830|gb|ACK45023.1| Diaminopimelate decarboxylase [Shewanella baltica OS223] Length = 391 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 115/358 (32%), Gaps = 26/358 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+ +ID + D + A + A+K A + L +S+YE+ Sbjct: 30 TPFVVIDTSIIAKQYDDMVNSFPYAN--VYYAVKANPAAEILSLLKDKGSNFDIASIYEL 87 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + +Y K + ++ + S+ + + A++ Sbjct: 88 DMVMNVGVTTDRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180 + + + + + ++ + G+ FH + + + + + Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLAQELGLEPFGISFHVGSQQRDIGAWDSAIG 206 Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230 ++ F ++ I++GGG D + LKE QI Sbjct: 207 KVKSIFDRLRDEHSITLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285 LEPG ++++N L + V+ IS+ + + + Sbjct: 267 LEPGRSLISNAGILVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIYTDRQ 326 Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 G ++ G +C + DI E + + IGDR+ + Y FNG Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384 >gi|196013976|ref|XP_002116848.1| hypothetical protein TRIADDRAFT_31500 [Trichoplax adhaerens] gi|190580566|gb|EDV20648.1| hypothetical protein TRIADDRAFT_31500 [Trichoplax adhaerens] Length = 390 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 115/358 (32%), Gaps = 28/358 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL+D ++ + G++ ALKC + + TL G +S E+ Sbjct: 15 PFYLVDIGDVI--YKYVTWTSMMPGIRPYFALKCHPDFQIIATLCSLGAGLDVASAGEIE 72 Query: 65 LGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E Y+ K A + F++ +L + K I L Sbjct: 73 IARALGLQDEDVVYSNTCKGISHIRAAAKEGLTQMSFDSEVELQRIKLTFPNAKLLIRLL 132 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 ++ S S K + NV G FH F+ ++ Sbjct: 133 VDDSHSILKTG--AKAGTPFSRVSHLFKVAKELGLNVVGTSFHIGSGCHDPSAFTKAIEK 190 Query: 182 IEKEF---GHFITQIEWISLGGGIHFT----DKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 +K F +++ + +GGG ++ F V+I EPG Sbjct: 191 SKKAFDIAKEQGLELKVLDIGGGFPGHANTLFENMCHAVNQAIDIHFPADSGVKIIAEPG 250 Query: 235 EAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPD------------YLLYQESAT 280 ++TL ++ + + ++ I + + H+ D Y Sbjct: 251 RFFAHTSSTLVANIIGKRLRYSDDDVQIEGTEMLYHINDGLIGSFLGTILARQKYLPQQL 310 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 I Y + + G SC A D ++ G+ + +ED+ Y FNG Sbjct: 311 IPTKGKSYRSSLWGPSCGAMDCLLSDCNLPEMEAGEWVYYEDMGAYTSCLTTNFNGFK 368 >gi|311894695|dbj|BAJ27103.1| putative diaminopimelate decarboxylase [Kitasatospora setae KM-6054] Length = 396 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 59/382 (15%), Positives = 106/382 (27%), Gaps = 37/382 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P YL D L ++ V+L A K + L+ +DG SS E+ Sbjct: 14 PAYLYDLAALRAHVRRVRAALPER-VELYYAAKANPDGPLLTALHGLVDGYEVSSGGELA 72 Query: 65 LGHEKFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLHKKI-GL 120 H A+ K E A L + +L+ A + + + Sbjct: 73 HVHAVVPDAPLAFGGPGKSAEEIAAALRLPAVRRWHVESERELHALAAAADRPVDVLLRV 132 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE---------IKNVNGLMFHNNCE--- 168 + + + G + + G+ H Sbjct: 133 NLPVGDGALDGVALAMGGRPTPFGLDPERVERCLALLASPGFGHLRLRGIHAHLASGLAA 192 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK 224 + + ++ + + +++GGG+ + F + L E ++ Sbjct: 193 AEQLRLAARIVDWSAELAARHGLAFDEVNVGGGMAVDYADPEARFDWPAFGRGLAELLDR 252 Query: 225 YSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 LEPG A+ T VLD+ + V H+ Sbjct: 253 RPGLTIRLEPGRALTAYCGWYATEVLDVKHSHGEDFAVVRGGTHHLRTPATRGHTQPFTV 312 Query: 283 PNT------------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 VCG+ C D+ ++ GDR+ F Y N Sbjct: 313 LPVPHWPHPWPRPAVTAAPVTVCGQLCTPKDVLASGVVVPELRAGDRLLFAMAGAYAWNI 372 Query: 331 KNW-FNGINMPT-IAVKNVDGT 350 + F P + ++DGT Sbjct: 373 SHHEFLMHPRPAFHYLYHLDGT 394 >gi|317489942|ref|ZP_07948434.1| pyridoxal-dependent decarboxylase [Eggerthella sp. 1_3_56FAA] gi|316910940|gb|EFV32557.1| pyridoxal-dependent decarboxylase [Eggerthella sp. 1_3_56FAA] Length = 412 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 62/379 (16%), Positives = 121/379 (31%), Gaps = 34/379 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D+Q L + + + +KL A+K + + D + S E Sbjct: 16 PTPLYLFDQQVLNDRITRLRASLP-SRIKLCYAMKANPF--IVREASALADCVEACSPGE 72 Query: 63 VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTI----IFNTVSQLNKFKDKAQKLHKK 117 V++ + E + +KD L D I + QL + A ++ Sbjct: 73 VLICANAGVPFEKIVLSGVWKDRRCLDDLFQADRIPHRFTIESSQQLKDLVELANAYRRR 132 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + S S ++F + G K I + G+ +++ + S Sbjct: 133 VNVLFRLS-SENQFGVDSATLKELIAGCKDDPFIS-----IQGIQYYSGTQKTSLKKLDR 186 Query: 178 MLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------- 224 L + + ++ I G G+ D + E + Sbjct: 187 ELSKLHRIVAEVEAACSVKLNEIEYGPGLPVEYFDENEERARSAQDEPVAELATLLDGFP 246 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + I LE G +I + T+V+D+ + + Y + Sbjct: 247 FEGDIVLELGRSIAADCGAYLTSVVDVKTTSGQNYAIVDGGMHQISYYGHSMAMKSPVFR 306 Query: 285 T------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGI 337 +CG C DI + + +GD ++F Y F Sbjct: 307 KVGATAGAAQPWNICGALCTVNDILAKQAPIVDLSVGDVLAFSRAGAYCATEGRALFLSR 366 Query: 338 NMPTIAVKNVDGTIKAIRE 356 ++P++ V++V G ++ R Sbjct: 367 DLPSVVVRDVSGNMRIARH 385 >gi|123403224|ref|XP_001302198.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] gi|121883464|gb|EAX89268.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] Length = 397 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 112/368 (30%), Gaps = 26/368 (7%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 ++ D K+ + VK A+KC + L G +S E+ + Sbjct: 34 WIADLNKVRYSTQLWESYLPR--VKAHYAVKCCDEPNILRFLADRGFGFDCASKKELQMI 91 Query: 67 HE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E ++ + + A D + F+T +L K ++ LR+ Sbjct: 92 TELGVDANRIVFSHPLKNHEALVYAKELGVDRMAFDTEEELRKI--LRYYPEAEVFLRVK 149 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC---ENKSFLCFSAMLK 180 P + +K L+ N G FH + +F + Sbjct: 150 PKFTNAKIPLSKKFGAAPEDVPNLLQLAHELGANFIGFSFHVGSLCDDINTFRTALQYVS 209 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234 ++ + + +I +GGG + + EF + ++ EPG Sbjct: 210 ELKVKAEELGLNVCFIDIGGGFLPPNAPCNNSFKEITETINAAIDEFFGENEIEFIGEPG 269 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSS----------VEAHVPDYLLYQESATIYPN 284 + L V+ ++ S A + D+ Sbjct: 270 RFFASEYMDLILPVIGAKVHVDGHGEKTQSIYIPDGIYGAFNALIYDHAEPHFEIHTEGE 329 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + + G++C + DI E +++GD + + Y + +FNG + + V Sbjct: 330 SEKLPTTIWGQTCDSADIVYEDMMWPELEVGDLLIIRRFSAYTYSPTAFFNGFHHHPVVV 389 Query: 345 KNVDGTIK 352 N + Sbjct: 390 LNANEEDI 397 >gi|319957271|ref|YP_004168534.1| orn/dap/arg decarboxylase 2 [Nitratifractor salsuginis DSM 16511] gi|319419675|gb|ADV46785.1| Orn/DAP/Arg decarboxylase 2 [Nitratifractor salsuginis DSM 16511] Length = 447 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 119/390 (30%), Gaps = 33/390 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLL--ALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ +Q++ + ++ + K + + ++ S Sbjct: 45 GSPLFVFSQQEIEEKYHRLHEAFSSRYPDVVFGWSYKTNYLNAICNLYHKLGSIAEVVSE 104 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 +E G+ +N YK E V I + + ++N ++ A++L KI Sbjct: 105 FEYQKARALGIEGKDIIFNGPYKPKEALKVAVEEGAKIHIDHLFEINDLEEIARELGVKI 164 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV---NGLMFHNNCENKSFLCF 175 + I ++ + GE + GL H + Sbjct: 165 PVAIRVNMDTGIYPQWSRFGFNYESGEAIDAIERIHSGGLLELTGLHSHIGTFMLDASAY 224 Query: 176 ----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------------KDYPVKDFC 215 + ++ + F +IE+I +GGG + DY + Sbjct: 225 GKETAKLMDLKHQAEERFGYRIEYIDIGGGFASKNRLKGVYQSPDVIVPTPDDYAQQITE 284 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL-DISENIKNLVIVDSSVEAHVPDYLL 274 ++YLE G ++ L TTV + + + Sbjct: 285 AIYTHNKSDTLPRLYLETGRHLIDEAGYLLTTVQAYKRFPDGMKGYILDAGVNLLYTATW 344 Query: 275 YQESATIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 Y + + +M+ G C+ DI E P+ G I+ V YN + Sbjct: 345 YNFNFELDRRYEGLNEPSMLNGPLCMNIDILSENIMLPPLDRGTVITIGPVGAYNYTQSM 404 Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 F P + + + + I+E +D Sbjct: 405 QFIRY-RPAAVLIDKERNVHLIKEP--DDL 431 >gi|281206013|gb|EFA80202.1| group IV decarboxylase [Polysphondylium pallidum PN500] Length = 443 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 56/405 (13%), Positives = 135/405 (33%), Gaps = 49/405 (12%) Query: 9 IDKQKLLN-------NLDTALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTS 57 ID++ NLD + + A +L +A+K G+ + G Sbjct: 36 IDEKIFEKDPLILLYNLDHFRSLAREANEQLGGIQSMAIKSNPVMGLMKEAVRCGLGAEV 95 Query: 58 SSLYEVMLG-HEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL- 114 +S E+ + F E Y + E++ L+ + + +L++ +K+ Sbjct: 96 ASFGELKIAEAAGFPVEKIIYDSPIKSQEELEYALNLGVKLNVDNFQELDRIIAIVEKMS 155 Query: 115 -----HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFH 164 +G+R+NP V+ K+ P S+ G ++ ++ K +N + H Sbjct: 156 AEKLATVCVGIRVNPQVAAGKYQDLSTGVPTSKFGIGMENSERIVQMYQTYKWLNNVHLH 215 Query: 165 NNCE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 + +++ + + +E QI + ++GGG+ + Sbjct: 216 VGSQGFEMSQTSDAIVKVFELVEHINQLTNKQIRFFNIGGGLSVNFDSEKDTPTFSQYAA 275 Query: 221 FSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDY 272 + + E G + + + + V ++ +++ ++ + + Sbjct: 276 HLREKLPRLFSGDYVVISEFGRSYFAKSGVVVSKVEYTKQSGGRDIGVIHAGANLFIRTI 335 Query: 273 LLY-----------QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 + E + + G + G C A D+ + + D I Sbjct: 336 YQHPLWKLRVTAFSHEGQYLDGSNGSSIYDLAGPCCFAADLLVKERKLPHLNPNDFIMVH 395 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIRE-FSYNDYYN 364 D Y + + +N P I + + ++ I++ + D Sbjct: 396 DSGAYMYSSYSHYNLRLAPPIYAIDSEVQNLRLIKKGETIEDKIR 440 >gi|152985411|ref|YP_001348455.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PA7] gi|150960569|gb|ABR82594.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PA7] Length = 394 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 103/350 (29%), Gaps = 30/350 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 YL D L + +L A K + TL +DG ++S E+ Sbjct: 24 AYLYDLPALAERVRAMRAALP-PACELFYAAKANPEAAILRTLAPLVDGFEAASGGELAW 82 Query: 66 GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + A+L+N D ++ +L + A++ ++I L + Sbjct: 83 LRQHCPEHPLIFGGPGKLESELDAALLANLDAFHVESLHELRRLASLARRRERRIPLLLR 142 Query: 124 PSVSYSKFILADPNRPF---------SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 ++ + + L E E + GL FH Sbjct: 143 LNLKLDETPDSRLVMGGKPTPFGLDEEALDEALALLREEPALELKGLHFHLLSHQLDVSA 202 Query: 175 FSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYS 226 +++ + F G + +++GGG+ +D + FC L ++ Sbjct: 203 HLQLVRAYCRAFLRIAGESGLPLSLLNVGGGMGIDYRDFARSFDWSGFCDALPALLDEEG 262 Query: 227 VQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 + E G I VLDI N L V H + + Sbjct: 263 MGGIRLRFEVGRYIAAPCGYYVMEVLDIKRNHGELFAVARGGTHHFRTPAAQGHDHPFVV 322 Query: 283 PNT------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + G+ C D+ + +GD + F Y Sbjct: 323 VRGERAAEIEDQAVTLVGQLCTPKDVLARRQPVAALAVGDLLVFTLAGAY 372 >gi|291439206|ref|ZP_06578596.1| lysine/ornithine decarboxylase [Streptomyces ghanaensis ATCC 14672] gi|291342101|gb|EFE69057.1| lysine/ornithine decarboxylase [Streptomyces ghanaensis ATCC 14672] Length = 460 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 58/407 (14%), Positives = 113/407 (27%), Gaps = 45/407 (11%) Query: 3 KTPYY-LIDKQKLLNNLDTALYIRK-----NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP L+D + + + V A+K + L + G Sbjct: 38 DTPLVALLDVAGIRESAAELRAAFEAVTPPGTPVLHAFAVKASPLVAVLRLLREEGIGAE 97 Query: 57 SSSLYEVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--DKAQ 112 +S E+ L E + A E+ L+ + + +L + ++ Sbjct: 98 VASPGELALARAAGVEPERTVLDSPAKTPDELRQALALGIAVNADNPQELARLDALMQST 157 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFH 164 +G+R+NP + S+ G +D + + + L H Sbjct: 158 DTRSPLGIRVNPQIGSGSIEALSTATATSKFGVALRDEGAREWVVRAYLDRPWLTRLHTH 217 Query: 165 NNCE----NKSFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYP----VKDFC 215 + + + E+ Q I+ + +GGG+ + Sbjct: 218 TGSQGIALSLMARGVAEAYALAEEVNRRAGRQQIDTVDIGGGLPVNFASDTTDPTYTQYA 277 Query: 216 QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDIS---------ENIKNLVIVDS 263 + L E + E G +++ T+ V + V + Sbjct: 278 RLLSEEVPGLFDGRYGLVTEFGRSLLAKHGTMVARVEYAKSAGGRPVAVTHAGVQVATRT 337 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 + A P GP V G +C AGD+ ++ GD + D Sbjct: 338 VYAPGAWPLRVAAYDAKGRPKEGPAVVQDVAGPACFAGDLLARGQSLPLLEQGDHAAVLD 397 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGT-----IKAIREFSYNDYYN 364 Y +N + P + DG R + + Sbjct: 398 TGAYYFAHHYAYNSLPRPGVYGFVPDGAGGVSFAVVRRAQTVEEIVA 444 >gi|239930837|ref|ZP_04687790.1| lysine/ornithine decarboxylase [Streptomyces ghanaensis ATCC 14672] Length = 480 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 58/407 (14%), Positives = 113/407 (27%), Gaps = 45/407 (11%) Query: 3 KTPYY-LIDKQKLLNNLDTALYIRK-----NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP L+D + + + V A+K + L + G Sbjct: 58 DTPLVALLDVAGIRESAAELRAAFEAVTPPGTPVLHAFAVKASPLVAVLRLLREEGIGAE 117 Query: 57 SSSLYEVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--DKAQ 112 +S E+ L E + A E+ L+ + + +L + ++ Sbjct: 118 VASPGELALARAAGVEPERTVLDSPAKTPDELRQALALGIAVNADNPQELARLDALMQST 177 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFH 164 +G+R+NP + S+ G +D + + + L H Sbjct: 178 DTRSPLGIRVNPQIGSGSIEALSTATATSKFGVALRDEGAREWVVRAYLDRPWLTRLHTH 237 Query: 165 NNCE----NKSFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYP----VKDFC 215 + + + E+ Q I+ + +GGG+ + Sbjct: 238 TGSQGIALSLMARGVAEAYALAEEVNRRAGRQQIDTVDIGGGLPVNFASDTTDPTYTQYA 297 Query: 216 QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDIS---------ENIKNLVIVDS 263 + L E + E G +++ T+ V + V + Sbjct: 298 RLLSEEVPGLFDGRYGLVTEFGRSLLAKHGTMVARVEYAKSAGGRPVAVTHAGVQVATRT 357 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 + A P GP V G +C AGD+ ++ GD + D Sbjct: 358 VYAPGAWPLRVAAYDAKGRPKEGPAVVQDVAGPACFAGDLLARGQSLPLLEQGDHAAVLD 417 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGT-----IKAIREFSYNDYYN 364 Y +N + P + DG R + + Sbjct: 418 TGAYYFAHHYAYNSLPRPGVYGFVPDGAGGVSFAVVRRAQTVEEIVA 464 >gi|325679833|ref|ZP_08159404.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Ruminococcus albus 8] gi|324108503|gb|EGC02748.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Ruminococcus albus 8] Length = 411 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 54/382 (14%), Positives = 118/382 (30%), Gaps = 36/382 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D V L ++K + L + S E Sbjct: 33 GTPCYLFDTDVFAKRAADVSAAFGER-VGLCYSIKANPF--LLAALPEVFRYIEVCSPGE 89 Query: 63 VMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + ++ ++ A + + + A K ++ Sbjct: 90 LSICEKIGAPLDKIIFSGVNKTEEDVARAYADGVAIFTAESRLHVRLINNCAVKNGGRVK 149 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 L + + + L + + + ++ GL + + + L Sbjct: 150 LILRLAHGSQ------FGMDKADLTDIIAHREQFAGVDIIGLHYFTGTQKTKVKTIAKEL 203 Query: 180 KNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFSEKYSV 227 + +++ + + + I G G+ +D + +K F+EKY + Sbjct: 204 ELLDEFCQELESGYGFKAQHIEYGTGLGVEYYKDFTEDSDLALLAEAAEVVKAFAEKYPL 263 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATIY 282 + E G + T V+DI ++ H+ + + + Sbjct: 264 TV--EMGRFFAAQCGSYLTKVMDIKTTNDINYVICDGGINHLNYYGQNMAMKVPPISLVN 321 Query: 283 PNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINM 339 G T +CG C DI +K GD ++F+ Y++ + F M Sbjct: 322 GTDGENTSDYCLCGSLCTTADILVRKVTLPELKRGDILAFDKCGAYSVAEGISAFLSRAM 381 Query: 340 PTIAVKNVDGTIKAIRE--FSY 359 P +A+ + ++ +RE +Y Sbjct: 382 PKVALYSKAEGLQLVRELTETY 403 >gi|157103349|ref|XP_001647940.1| ornithine decarboxylase [Aedes aegypti] gi|108884772|gb|EAT48997.1| ornithine decarboxylase [Aedes aegypti] Length = 437 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 55/376 (14%), Positives = 102/376 (27%), Gaps = 27/376 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +L + L+ +++ VK A+K + + G +S+ EV Sbjct: 36 PLHLTEVDTLVK--RHYEWLQHLPRVKPYYAVKSNDEASLVEATVLMGLGYDCASMAEVR 93 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI-IFNTVSQLNKFKDKAQKLHKKIGLRI 122 E E + K + +F++ +L K + I R Sbjct: 94 RMLELGVERERIIFAQPQKTIVSLQYARKHKILTVFDSECELRKIHQHYPEAEVLIRYRF 153 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAML 179 + S + + + V G F+ F Sbjct: 154 DSKKSKVNLGSKFGCETENES-KSLLHVAKQLGIKVVGWCFNVGSGCTDADVFYAAIKKG 212 Query: 180 KNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + I + I LGGG ++Y V + + + I+ EPG Sbjct: 213 REIHDYATSIGFKFRMIDLGGGFMGDKGCGIEEYAVHINRALEECYPASEDIFIFAEPGR 272 Query: 236 AIVTNTTTLNTTVLDISENIKNLV-----IVDSSVEAHVPDYLLYQES-----ATIYPNT 285 T + V V + I + Sbjct: 273 YYCAAAVTSISPVHGKRILCNENDPLKIEQVFYYFNDGMYGTFYSPRYRNQTLYPIVWKS 332 Query: 286 G-----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 G Y + G +C D F + +++ D + FE+ Y FNG +P Sbjct: 333 GGNLGTTYKTTLFGPTCDGNDFFAKDIDLPELEVSDFVVFENQGAYARVHSCRFNGFCLP 392 Query: 341 TIAVKNVDGTIKAIRE 356 + T + + + Sbjct: 393 KVINYMRKSTWELLEK 408 >gi|149180385|ref|ZP_01858890.1| probable diaminopimelate decarboxylase protein [Bacillus sp. SG-1] gi|148852577|gb|EDL66722.1| probable diaminopimelate decarboxylase protein [Bacillus sp. SG-1] Length = 398 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 109/370 (29%), Gaps = 36/370 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D + L + L A+K + + L+ +DG ++S E++ Sbjct: 24 AYVYDLKGLREHARRLKDSLPAF-CSLYYAVKANPDNRILEALSGIVDGFDTASEGEILK 82 Query: 66 GHEKFGGETHAYNVAYKDCEIDAVLSNCDTI-IFNTVSQLNKFKDKAQK----LHKKIGL 120 H+ A KD E+ + + L + ++ L I + Sbjct: 83 VHKLSALPVIFAAPAKKDRELAYLADGSLRFMNVESERDLYRLNRVGKEAGKALPVLIRI 142 Query: 121 RINPSVSYSKFIL----ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + +VS S + ++ + E +NG FH N + Sbjct: 143 NLQHNVSNSSHKMSGVPTQFGIEERKIPSILEKLSEFPYIELNGFHFHAMSNNLNAEEHL 202 Query: 177 AMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 +K ++ + +G + + F + L + E++ Sbjct: 203 IFVKRCLEKSLEWKKTFSLDLGVVNIGGGIGVNYENPSESFDWTFFSEGLHQMQEEFEAN 262 Query: 229 ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271 + +E G + T V+D+ +N + H+ Sbjct: 263 QLELIMELGRYLTAQCGFYITEVIDLKQNYDEWFPLVRGGTHHLRLPAAWKMSHPFSVYP 322 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 ++E+ P + G C D+ + +K+GD + F Y Sbjct: 323 VTEWKEAPLPRPAVKGERITIAGELCTPNDLLVRKQYVDDLKVGDLVMFHLSGAYGWTIS 382 Query: 332 NW-FNGINMP 340 + F P Sbjct: 383 HHDFLSHPAP 392 >gi|330863543|emb|CBX73659.1| diaminopimelate decarboxylase [Yersinia enterocolitica W22703] Length = 309 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 90/301 (29%), Gaps = 35/301 (11%) Query: 96 IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK----- 150 + ++ L++ A + LR+NP + + S+ G +D Sbjct: 8 VNAGSIDMLDQLGLHA--SGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIA 65 Query: 151 -IESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY 209 I+ + G+ H + + + ++ I IS GGG+ + Sbjct: 66 KIQQYGLKLVGIHMHIGSGVD-YQHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFG 124 Query: 210 PVKDFCQRLKEFSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNL 258 + + + V + +EPG +V L V + + ++ Sbjct: 125 DDEIDTEHYYGLWNSARERIAAHLGHPVSLEIEPGRFLVAEAGVLIAQVRAVKNMGRRHY 184 Query: 259 VIVDSSVEAHVPDYLLYQESA--------TIYPNTGPYTAMVCGRSCLAGDIFG------ 304 V+VD+ + + N +V G C +GD+F Sbjct: 185 VLVDAGFNDLMRPAMYGSYHHISVLPADGRSLANEPLIDTVVAGPLCESGDVFTQEAGGG 244 Query: 305 -EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 E IGD + F D Y + + +N + + R + + Sbjct: 245 LETRKLPAANIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELI 304 Query: 364 N 364 Sbjct: 305 A 305 >gi|318058551|ref|ZP_07977274.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actG] gi|318080248|ref|ZP_07987580.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actF] Length = 448 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 55/396 (13%), Positives = 111/396 (28%), Gaps = 40/396 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 +D + L A+K + + + LN+ G +S E+ L Sbjct: 32 VDVTGVREAARELRAAFAGPAPVLHTFAVKAASLVPVLELLNEEGVGCEVASPGELELAR 91 Query: 68 E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRIN 123 + A E+ L++ + + +L + +G+R+N Sbjct: 92 AAGVPASRIVLDSPAKTVAELRDALAHGIAVNADNPQELARVDALLAEGPTDSPLGVRVN 151 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE----NKS 171 P V S+ G +D + E + L H + Sbjct: 152 PQVGTGSIGAMSTATATSKFGVALRDPGAEDWLVRQYVERPWLTRLHTHTGSQGVALELM 211 Query: 172 FLCFSAMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225 + E+ Q++ I +GGG+ + + + + Sbjct: 212 AESVRIVYGLAERINREVGGQQVDTIDIGGGLPVNFEGEEITPRFAAYAKLLRETVPGLF 271 Query: 226 --SVQIYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDYLLYQE 277 I E G +++ + V + + + ++ VPD + Sbjct: 272 DGRYTIVTEFGRSLLAKQGFVAALVEYTKTSGGRRIAVTHAGAQVATRTVFVPDSWPLRV 331 Query: 278 SATIYPNTGPYTAMVC----GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 +A T + + G C AGD+ + GD I+ D Y + Sbjct: 332 AAFAPDGTLKESPDLVQDVAGPCCFAGDLVARARTLPELSPGDLIALWDTGAYYFSTHFA 391 Query: 334 FNGINMPTI-AVKNVDGTI----KAIREFSYNDYYN 364 +N + P + D R S + Sbjct: 392 YNSLPRPAVHGFWTDDEGRTRFATIRRGQSLAELLA 427 >gi|224372743|ref|YP_002607115.1| Orn/DAP/Arg decarboxylase, family 2 [Nautilia profundicola AmH] gi|223589196|gb|ACM92932.1| Orn/DAP/Arg decarboxylase, family 2 [Nautilia profundicola AmH] Length = 444 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 126/384 (32%), Gaps = 32/384 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ ++ + + V+ + K + ++ S Sbjct: 44 GSPLFVFSERIIEEKYHEFKNAFTSRYPEVEFWWSYKTNYLDAICKIYHKLGSKAEVVSE 103 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 +E G+ +N YK + I + ++N ++ A++L +I Sbjct: 104 FEYEKARRLGIEGKNIIFNGPYKPKDALKKAVEEGAKIHIDHWYEINDLEEIAEELGIEI 163 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 + I ++ + GE D ++ + + + +F+ + Sbjct: 164 PVAIRCNMDTGVYPQWSRFGFNIDNGE-AYDAVKRIYEGKKLYLTGLHSHIGTFMLSANA 222 Query: 179 LKNIEKEF--------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS---- 226 N K+ F +IE+I +GGG ++ V + + +++Y+ Sbjct: 223 YANETKKLIELKNKIEKDFGYEIEYIDVGGGFASKNRLKGVYQAPEVIVPSADEYAEAIT 282 Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL 274 ++YLE G A++ L TTV + + + Sbjct: 283 NAIFETNKGKLPKLYLETGRALIDEAGFLLTTVFAAKRMPDGKKSYIVDAGVNLLYTAFW 342 Query: 275 YQ-ESATIYPNTG-PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 Y E A G + + G C+ D+ E P+K G +S V YN+ + Sbjct: 343 YNFEIALDKRYEGLNEPSQINGPLCMNIDVISENIMLPPLKRGSVLSIWPVGAYNVTQSM 402 Query: 333 WFNGINMPTIAVKNVDGTIKAIRE 356 F P I + + + I+E Sbjct: 403 QFIRY-RPRIILIDKNSNTHLIKE 425 >gi|238064162|ref|ZP_04608871.1| decarboxylase [Micromonospora sp. ATCC 39149] gi|237885973|gb|EEP74801.1| decarboxylase [Micromonospora sp. ATCC 39149] Length = 411 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 103/387 (26%), Gaps = 35/387 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY---MDGTTSSS 59 TP Y+ D ++ +G L A+K + L SS Sbjct: 12 GTPLYVYDLDRVAEARSRLFAALP-SGFDLFYAVKANPHPDVAGALRDGPGPACRAEISS 70 Query: 60 LYEVMLGHEKFGG--ETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKA--QKL 114 E+ E D E+ A+ + + L + A Sbjct: 71 TGELDAALAAGYAAGECLYTGPGKTDTELAVAIARGVRLFSAESPTDLRRIGAVAERYGA 130 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFS------RLGEKCKDKIESEIKNVNGLMFHNNC- 167 + LRIN + + + + RP L + + + G F Sbjct: 131 VAECLLRINCTTAGAATGIRMMGRPSQFGLDLESLPALLPELRATRGARLVGAHFFTMSN 190 Query: 168 ---ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 E+ F +++ +E + LGGG +L+ E+ Sbjct: 191 AGDESNLVAEFEQVVELAAGLAVDSGLPLELLDLGGGFAAPYAVPGAPMVYPKLRTELER 250 Query: 225 Y-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273 + ++ E G +V TL V+++ ++ + + Sbjct: 251 LLDLNLPRWRTGTPRLACESGRYLVAGCGTLLCGVVNVKRGRGQTYVIVDAGINAIGGLS 310 Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + A + G C GD+ G + GD + +V Y I Sbjct: 311 GLGRLLPMAVCLDGADATERASLVGPLCTPGDLLGRDVQVPVLAAGDVVRIPNVGAYGIT 370 Query: 330 RK-NWFNGINMPTIAVKNVDGTIKAIR 355 F P + R Sbjct: 371 ASLLGFLSRPAPAEVTVRNGEVVSVSR 397 >gi|307213747|gb|EFN89085.1| Ornithine decarboxylase [Harpegnathos saltator] Length = 400 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 54/378 (14%), Positives = 111/378 (29%), Gaps = 29/378 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D K++ D I K V A+K + + L +S E+ Sbjct: 30 FYIADIGKVIAKHDEW--IAKMPRVVPHFAIKSNSDPTVIKVLAALDACFDCASKQEIKQ 87 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + G+ + K D S+ FK K KI +RI Sbjct: 88 VMQHGVHGDRIIFAHPAKYPSHIIYAKKVDVKQMTVDSEYELFKIKDFFPEAKIVIRIRC 147 Query: 125 S-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS----AML 179 + + + + N++G FH +S Sbjct: 148 DSKNTPVVLGMKFGCESHEEAVRLIQLTKDLGLNLHGFSFHVGSPCCEPEAYSRGITMCK 207 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------YSVQIYL 231 + I ++ I +GGG + + + + + + Y Sbjct: 208 QLIIVSKSIGCDDVQLIDIGGGFP-GESGTNIDEIASVVNKAIQDVDPSIRVISEPGTYY 266 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GP 287 + + +L E ++ I + L Q + Sbjct: 267 VASSFTLASYLHSKRMILKDGETMRMYYINCGVFNGFTEELLDLQARVPQLLSEPVSSEK 326 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 +++ V G + + D+ + + IGD + ++D+ Y I+ FNG +P + Sbjct: 327 FSSCVWGSTLHSYDLIVKDMLLPELNIGDWLIWKDMGAYAISLSTTFNGFEIPVVI---- 382 Query: 348 DGTIKAIREFSYNDYYNN 365 +R+ + D+ Sbjct: 383 ----PIVRKSQWEDFRAR 396 >gi|302519173|ref|ZP_07271515.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78] gi|302428068|gb|EFK99883.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78] Length = 472 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 55/396 (13%), Positives = 111/396 (28%), Gaps = 40/396 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 +D + L A+K + + + LN+ G +S E+ L Sbjct: 56 VDVTGVREAARELRAAFAGPAPVLHTFAVKAASLVPVLELLNEEGVGCEVASPGELELAR 115 Query: 68 E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRIN 123 + A E+ L++ + + +L + +G+R+N Sbjct: 116 AAGVPASRIVLDSPAKAVAELRDALAHGIAVNADNPQELARVDALLAEGPTDSPLGVRVN 175 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE----NKS 171 P V S+ G +D + E + L H + Sbjct: 176 PQVGTGSIGAMSTATATSKFGVALRDPGAEDWLVRQYVERPWLTRLHTHTGSQGVALELM 235 Query: 172 FLCFSAMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225 + E+ Q++ I +GGG+ + + + + Sbjct: 236 AESVRIVYGLAERINREVGGQQVDTIDIGGGLPVNFEGEEITPRFAAYAKLLRETVPGLF 295 Query: 226 --SVQIYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDYLLYQE 277 I E G +++ + V + + + ++ VPD + Sbjct: 296 DGRYTIVTEFGRSLLAKQGFVAALVEYTKTSGGRRIAVTHAGAQVATRTVFVPDSWPLRV 355 Query: 278 SATIYPNTGPYTAMVC----GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 +A T + + G C AGD+ + GD I+ D Y + Sbjct: 356 AAFAPDGTLKESPDLVQDVAGPCCFAGDLVARARTLPELSPGDLIALWDTGAYYFSTHFA 415 Query: 334 FNGINMPTI-AVKNVDGTI----KAIREFSYNDYYN 364 +N + P + D R S + Sbjct: 416 YNSLPRPAVHGFWTDDEGRTRFATIRRGQSLAELLA 451 >gi|332995687|gb|AEF05742.1| Orn/DAP/Arg decarboxylase 2 [Alteromonas sp. SN2] Length = 407 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 108/378 (28%), Gaps = 38/378 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ D+ + ++ + N V L A+K + + ++G +S E Sbjct: 33 DSPCYIYDRHMISRTIEQVKRLLPNR-VHLHYAVKANPMSALVSHIASQVNGLDVASHKE 91 Query: 63 VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +M+ + D E+ A L+ I + S+L + A+++ KK + Sbjct: 92 LMIALSSGMPANKVSLAGPGKSDKELVAALTAGVVINVESESELARVSVHAKEIGKKANI 151 Query: 121 RINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173 + + A P S K I E + G + S Sbjct: 152 ALRVNPAFHIRGAGMKMTGGAKPFGVDSEKVPKLIQSINREYCHFVGFHIFCGSQILSAE 211 Query: 174 CFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---- 225 S + + + I++GGG T + R+ Y Sbjct: 212 LLSDVYQRTISLAVELSNAAKVIPKQINIGGGFGVTYFQHEKPLDIARVCSNLAIYIDKL 271 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------V 269 + +LE G +V T V+D + + +V H + Sbjct: 272 PPAFTKTEFHLELGRYLVAQAGLYLTKVIDKKVSREKKFLVCDGGMHHHLANSGNFGQVI 331 Query: 270 PDYLLYQE-SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 Y A + + G C DI +GD I+ Y Sbjct: 332 R--KNYPVLIANKVDSKFKEEVNIVGPLCTPLDIIATNINIPSANVGDHIAILMSGAYGA 389 Query: 329 NRKNW-FNGINMPTIAVK 345 F T + Sbjct: 390 TASPQSFLSREQVTELLL 407 >gi|190348193|gb|EDK40604.2| hypothetical protein PGUG_04702 [Meyerozyma guilliermondii ATCC 6260] Length = 432 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 50/377 (13%), Positives = 107/377 (28%), Gaps = 35/377 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ N ++ V+ A+KC + + L + +S E+ Sbjct: 59 FFVADIGAVVRNYRLWQ--QELPQVQPHYAVKCNTDMRVIEALARMGCNFDCASKTEIDQ 116 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 Y K + + V +L K K + I + Sbjct: 117 VLSLGVDPGRIVYANPCKTNSYVRHAKDVGVNLTTVDNVHELQKIKRFHPECGILIRIMT 176 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + + E + V G+ FH +++ Sbjct: 177 DDESAQCRLSTKFGCSVKTAVEELFP-LAKELNLRVRGVAFHVGSGATDLDSIYKAVQDS 235 Query: 183 EKEFGHFITQIEWISLG-GGIHFTDKDYPVKDFCQRLKEFSEK---------YSVQIYLE 232 F I Q + + I ++ + ++ +K + V+ E Sbjct: 236 RILFDCGIDQFGFKEMNLLDIGGGFQESTFGESSAMVRMSLDKFFSSAYRELHPVEFIAE 295 Query: 233 PGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQE----- 277 PG +V N TL V+ + + V ++ + D+ + Sbjct: 296 PGRFMVANAFTLAVHVIARRDVREAESEVQAMLYVNDGVYGNLNCILFDHQVPSASLLTH 355 Query: 278 ---SATIYPNTGPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + + G +C D G+ V++GD + F ++ Y Sbjct: 356 KGQFVYGSEPDPELSFSIWGPTCDGLDCISGKCQLAFNVEVGDWLYFPNLGAYTSAATTS 415 Query: 334 FNGINMPTIAVKNVDGT 350 FNG V Sbjct: 416 FNGFKGTAEVVYVNSEK 432 >gi|152990247|ref|YP_001355969.1| diaminopimelate decarboxylase [Nitratiruptor sp. SB155-2] gi|151422108|dbj|BAF69612.1| diaminopimelate decarboxylase [Nitratiruptor sp. SB155-2] Length = 443 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 54/384 (14%), Positives = 119/384 (30%), Gaps = 32/384 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ + + + V+ + K + + S Sbjct: 47 GSPLFVFSQNSIEEKYQEFKQAFTSRYPEVEFWWSYKTNYLDAICQIYHDLGSKAEVVSA 106 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 +E G+ +N YK E I + ++N + A +L +I Sbjct: 107 FEYDKARRLGMPGKDIIFNGPYKPKEALKKAVQEGAKIHIDHWYEINDLESIADELGIEI 166 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 + I +++ + GE D IE + + + +F+ + Sbjct: 167 PVAIRCNMNTGIYPQWSRFGFNIDNGE-AYDAIERIYEGKKLYITGLHAHIGTFMLSAHA 225 Query: 179 LKNIEKEF--------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS---- 226 K+ F ++E+I +GGG ++ + + + ++Y+ Sbjct: 226 YAEETKKLIQLKNRISADFGYEVEYIDIGGGFASKNRLKGIYQPPEVVVPSPDEYAEAVT 285 Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLL 274 +++LE G A++ L T+V + + + Sbjct: 286 GAIFEYNEGNLPKLFLETGRALIDEAGYLLTSVFASKRLLDGKKSYIVDAGVNLLYTAFW 345 Query: 275 YQESATIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 Y + + + G C+ D E P+ G +S V YN+ + Sbjct: 346 YNFDIALDKRYEGLNEPSQINGPLCMNIDTIAENIMLPPLPRGSILSIWPVGAYNVTQSM 405 Query: 333 WFNGINMPTIAVKNVDGTIKAIRE 356 F P + + + +G+ IRE Sbjct: 406 QFIQY-RPRVVLIDKEGSTHLIRE 428 >gi|21243907|ref|NP_643489.1| diaminopimelate decarboxylase [Xanthomonas axonopodis pv. citri str. 306] gi|21109513|gb|AAM38025.1| diaminopimelate decarboxylase [Xanthomonas axonopodis pv. citri str. 306] Length = 398 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 52/373 (13%), Positives = 110/373 (29%), Gaps = 32/373 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D L + + + A +L A K A + TL ++DG ++S E+ Sbjct: 27 AYVYDLAALDTH-AAWMRAQLPAQCELFYAAKANAEPPILRTLAPHVDGFEAASGGELAW 85 Query: 66 GHEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 H + + D E+ + D + ++S+L + + A + + + + Sbjct: 86 LHAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHVESLSELERLAEVASHAGRCVPVFLR 145 Query: 124 PS---VSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFL 173 + L +P G D + + + G FH + Sbjct: 146 MNIAVPGAQSTRLMMGGQPSP-FGLDPCDLHAAMQRLQASPSLRLAGFHFHLMSHQRDAT 204 Query: 174 CFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225 ++ ++ + ++ GGG + FC L ++ Sbjct: 205 AQLHLVAAYLRTVQQWRQAYALGPLRVNAGGGFGVDYLAPEASFDWAGFCAGLPALLREH 264 Query: 226 SV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 + ++ LEPG + + VLD+ + + H + Sbjct: 265 ATDLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQGHDHPFRV 324 Query: 283 PNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FN 335 + G+ C D+ + GD ++F Y N + F Sbjct: 325 LRGERAPVLRDTPVTLVGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQRFL 384 Query: 336 GINMPTIAVKNVD 348 P + Sbjct: 385 MHPAPQMVFLTEG 397 >gi|254371951|ref|ZP_04987444.1| hypothetical protein FTCG_01087 [Francisella tularensis subsp. novicida GA99-3549] gi|151569682|gb|EDN35336.1| hypothetical protein FTCG_01087 [Francisella novicida GA99-3549] Length = 403 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 53/380 (13%), Positives = 107/380 (28%), Gaps = 33/380 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D L + + VKL ALK + ++ +S+ E+ Sbjct: 20 PFFYYDLDMLEAHAKELHRL----PVKLWYALKANPLSRIIKVFDEQKISFDVASIGELD 75 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119 + + K + +++QL +K + + Sbjct: 76 QVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQLKDLSILVEKKNINVKVL 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171 LR+ + + + + G D + S ++ G+ Sbjct: 136 LRVQLVWNDQENNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIGMHCFQWGNILC 195 Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 S + + K ++ I LGGGI L K Sbjct: 196 LNKLSQIWEITTKALLDLSEAINVSLKVIDLGGGIGVPYNAGQKSISINDLIFCFNKLKK 255 Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATI 281 ++ +LE G V + T ++D ++V H+ L + Sbjct: 256 EFPYIEYWLELGRYAVAESGVYVTKIVDRKSVNNIDLLVTDGGAQHLVRPALTGESFPIQ 315 Query: 282 YPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 + + G C + D G K + D + F+ Y F Sbjct: 316 LLREEACSETNDFQIHGPLCTSLDKAGIASLPKDTGLNDYLIFKQTGAYGFTESMPLFLC 375 Query: 337 INMPTIAVKNVDGTIKAIRE 356 N+P + G ++ +R+ Sbjct: 376 HNLPAEVIFYK-GQLQTVRQ 394 >gi|46562189|ref|YP_009103.1| Orn/DAP/Arg family decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|46447726|gb|AAS94392.1| Orn/DAP/Arg family decarboxylase [Desulfovibrio vulgaris str. Hildenborough] Length = 518 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 58/405 (14%), Positives = 105/405 (25%), Gaps = 49/405 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++D++ L + + + G +L + K G+ L+ G + S Sbjct: 35 GTPLLVVDEKALRAKVAEVRAVLDDELPGARLTYSYKTNCIPGILRVLHDAGVGAEAISA 94 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 YE L GE YN + +++ I + +++ +AQ Sbjct: 95 YEYWLAQSLGVPGEQLIYNGVDKSPESLAMAVAHGALINIDNRDEVDAVLATARAQGRVA 154 Query: 117 KIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 +IGLR+ + S + K E ++ L F+ + Sbjct: 155 RIGLRLGLNRSAQFGLDPDSAEGDGDIAHVVARCKAHPEHASLEALHFNVTSNARHSGYH 214 Query: 176 SAMLKN----IEKEFGHFITQIEWISLGGGIH-------------------------FTD 206 L + I + +GGG + D Sbjct: 215 VRCLALALDVMRTLARVHGVHIRLLDVGGGFGVQTSKNMSGVEYGLYRLFGVAPGGAWLD 274 Query: 207 KDYPV----KDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259 +D L + + LEPG + + L T V + E Sbjct: 275 PFQDFRLYIRDMAALLTSYCRDNALPQPVVCLEPGRLLTSGAELLLTRVKAVKERPGAEP 334 Query: 260 IVDSSVEAHVPDY-----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKI 314 + Y A V GR C D + Sbjct: 335 FAITDGGRLSQAYPCDFEWHEAFLANDLRRPLARAYTVTGRVCTRSDWLYRGKVMPELAS 394 Query: 315 GDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD ++ D Y + F + ++ Sbjct: 395 GDILAVLDAGAYFSSYAMNF-AFPRAAVVGVEDGRARVMRHRETF 438 >gi|325829969|ref|ZP_08163427.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Eggerthella sp. HGA1] gi|325488136|gb|EGC90573.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Eggerthella sp. HGA1] Length = 412 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 62/379 (16%), Positives = 121/379 (31%), Gaps = 34/379 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D+Q L + + + +KL A+K + + D + S E Sbjct: 16 PTPLYLFDQQVLNDRITRLRASLP-SRIKLCYAMKANPF--IVREASALADCVEACSPGE 72 Query: 63 VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTI----IFNTVSQLNKFKDKAQKLHKK 117 V++ + E + +KD L D I + QL + A ++ Sbjct: 73 VLICANAGVPFEKIVLSGVWKDRRCLDDLFQADRIPHRFTIESSQQLKDLVELANAYRRR 132 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + S S ++F + G K I + G+ +++ + S Sbjct: 133 VNVLFRLS-SENQFGVDSATLKELIAGCKDDPFIS-----IQGIQYYSGTQKTSLKKLDR 186 Query: 178 MLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------- 224 L + + ++ I G G+ D + E + Sbjct: 187 ELSKLHRIVAEVEAACSVKLNEIEYGPGLPVEYFDENEERARSAQDEPVAELATLLDGFP 246 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + I LE G +I + T+V+D+ + + Y + Sbjct: 247 FEGDIVLELGRSIAADCGAYLTSVVDVKTTSGQNYAIVDGGMHQISYYGHSMAMKSPVFR 306 Query: 285 T------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGI 337 +CG C DI + + +GD ++F Y F Sbjct: 307 KVGATAGAAQPWNICGALCTVNDIMAKQASIVDLSVGDVLAFSRAGAYCATEGRALFLSR 366 Query: 338 NMPTIAVKNVDGTIKAIRE 356 ++P++ V++V G ++ R Sbjct: 367 DLPSVVVRDVSGNMRIARH 385 >gi|221120904|ref|XP_002160819.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 370 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 111/356 (31%), Gaps = 27/356 (7%) Query: 35 ALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNC 93 A+KC + L +S E+ + + + K + Sbjct: 3 AIKCNPDPVVIALLAHLGVNFDCASKCEIKAVLDLGVDPDRIIFANPCKQASYIKYANEK 62 Query: 94 DTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES 153 + ++ +K K ++ +RI S S + L +K + Sbjct: 63 NVKKMTFDNEAELYKIKEHFPGAELVIRIKVDDSKSIYKLGRKFGASLESTQKLLHIAKD 122 Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYP 210 NV G+ FH F + +K+ F + +GGG Sbjct: 123 LDLNVIGVSFHVGTGCYDASLFYSAVKSAAAVFNQGEILGYNFTLLDIGGGFPGVKNGKI 182 Query: 211 VKDFCQRL------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNL 258 D + F + ++ I EPG+ V + TL V + + Sbjct: 183 SMDNIAAQLNLSIAEFFPPEMNLSIIAEPGKYFVESAFTLCCNVTSVRKVVDDKKTEFMY 242 Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIG 315 + D + + + ++ + + V G +C + D E + + IG Sbjct: 243 YLNDGVYNSFLCVLFSEKFKPVPLNDSKTHLLFKSSVWGPTCDSCDCISEETYLPKLSIG 302 Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIA------VKNV--DGTIKAIREFSYNDYY 363 D + FE++ Y FNG N P I + +G ++ S+ D++ Sbjct: 303 DWLYFENMGAYATCLATKFNGFNPPIIYYACTDSIYKDLSNGKANLMQCRSFKDFF 358 >gi|311235443|gb|ADP88296.1| cyclic nucleotide-binding protein [Desulfovibrio vulgaris RCH1] Length = 541 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 58/405 (14%), Positives = 105/405 (25%), Gaps = 49/405 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++D++ L + + + G +L + K G+ L+ G + S Sbjct: 58 GTPLLVVDEKALRAKVAEVRAVLDDELPGARLTYSYKTNCIPGILRVLHDAGVGAEAISA 117 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116 YE L GE YN + +++ I + +++ +AQ Sbjct: 118 YEYWLAQSLGVPGEQLIYNGVDKSPESLAMAVAHGALINIDNRDEVDAVLATARAQGRVA 177 Query: 117 KIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 +IGLR+ + S + K E ++ L F+ + Sbjct: 178 RIGLRLGLNRSAQFGLDPDSAEGDGDIAHVVARCKAHPEHASLEALHFNVTSNARHSGYH 237 Query: 176 SAMLKN----IEKEFGHFITQIEWISLGGGIH-------------------------FTD 206 L + I + +GGG + D Sbjct: 238 VRCLALALDVMRTLARVHGVHIRLLDVGGGFGVQTSKNMSGVEYGLYRLFGVAPGGAWLD 297 Query: 207 KDYPV----KDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259 +D L + + LEPG + + L T V + E Sbjct: 298 PFQDFRLYIRDMAALLTSYCRDNALPQPVVCLEPGRLLTSGAELLLTRVKAVKERPGAEP 357 Query: 260 IVDSSVEAHVPDY-----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKI 314 + Y A V GR C D + Sbjct: 358 FAITDGGRLSQAYPCDFEWHEAFLANDLRRPLARAYTVTGRVCTRSDWLYRGKVMPELAS 417 Query: 315 GDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD ++ D Y + F + ++ Sbjct: 418 GDILAVLDAGAYFSSYAMNF-AFPRAAVVGVEDGRARVMRHRETF 461 >gi|289774015|ref|ZP_06533393.1| decarboxylase [Streptomyces lividans TK24] gi|289704214|gb|EFD71643.1| decarboxylase [Streptomyces lividans TK24] Length = 457 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 56/386 (14%), Positives = 111/386 (28%), Gaps = 36/386 (9%) Query: 4 TPYY-LIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP L+D +L +D + V+ A K + L + G +S Sbjct: 35 TPLVGLLDVDGVLAAVDALNEAFEGPAPVQHTFAAKACGLVPVLRLLAEAGMGCEVASPG 94 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKA--QKLHKK 117 E+ F + ++ K E I + ++ + ++ Sbjct: 95 ELEQALAAGFTYDRLVFDSPAKTVEELEFALAHGIAINLDNFQEMARVDGLLAGREAAGP 154 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCE- 168 IGLR+NP V S+ G +D+ + +N L H + Sbjct: 155 IGLRVNPQVGAGAIGAMSTATATSKFGVALRDEGAVDAVIEAFARRPWLNRLHAHVGSQG 214 Query: 169 ---NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQ-------R 217 + E+ QI + +GGG+ + Sbjct: 215 CPLPLIAQGVRTAYELAERINRELGRAQITGLDIGGGLPVNFDGEDDRPTYADHVAELRS 274 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPD 271 + E G +++ + T+ + V + + ++ +PD Sbjct: 275 AAPGLFDGRYALITEFGRSLLAKSGTIASVVEYTKSAGGRRIAVTHAGAQVATRTVFMPD 334 Query: 272 YLLYQE----SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + +A + G C AGD+ V+ GD ++ D Y Sbjct: 335 AWPLRVGVFDAAGRPKQGPAEVVDIAGPCCFAGDLTATGRELPAVEPGDVVALYDTGAYY 394 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKA 353 + +N + P + D + Sbjct: 395 FSSHFSYNSLPRPAVYGYRTDSRGQI 420 >gi|21218863|ref|NP_624642.1| decarboxylase [Streptomyces coelicolor A3(2)] gi|256790137|ref|ZP_05528568.1| decarboxylase [Streptomyces lividans TK24] gi|5881872|emb|CAB55672.1| putative decarboxylase [Streptomyces coelicolor A3(2)] Length = 452 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 56/386 (14%), Positives = 111/386 (28%), Gaps = 36/386 (9%) Query: 4 TPYY-LIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP L+D +L +D + V+ A K + L + G +S Sbjct: 30 TPLVGLLDVDGVLAAVDALNEAFEGPAPVQHTFAAKACGLVPVLRLLAEAGMGCEVASPG 89 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKA--QKLHKK 117 E+ F + ++ K E I + ++ + ++ Sbjct: 90 ELEQALAAGFTYDRLVFDSPAKTVEELEFALAHGIAINLDNFQEMARVDGLLAGREAAGP 149 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCE- 168 IGLR+NP V S+ G +D+ + +N L H + Sbjct: 150 IGLRVNPQVGAGAIGAMSTATATSKFGVALRDEGAVDAVIEAFARRPWLNRLHAHVGSQG 209 Query: 169 ---NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQ-------R 217 + E+ QI + +GGG+ + Sbjct: 210 CPLPLIAQGVRTAYELAERINRELGRAQITGLDIGGGLPVNFDGEDDRPTYADHVAELRS 269 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPD 271 + E G +++ + T+ + V + + ++ +PD Sbjct: 270 AAPGLFDGRYALITEFGRSLLAKSGTIASVVEYTKSAGGRRIAVTHAGAQVATRTVFMPD 329 Query: 272 YLLYQE----SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + +A + G C AGD+ V+ GD ++ D Y Sbjct: 330 AWPLRVGVFDAAGRPKQGPAEVVDIAGPCCFAGDLTATGRELPAVEPGDVVALYDTGAYY 389 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKA 353 + +N + P + D + Sbjct: 390 FSSHFSYNSLPRPAVYGYRTDSRGQI 415 >gi|317476226|ref|ZP_07935477.1| carboxynorspermidine decarboxylase [Bacteroides eggerthii 1_2_48FAA] gi|316907637|gb|EFV29340.1| carboxynorspermidine decarboxylase [Bacteroides eggerthii 1_2_48FAA] Length = 255 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 107/200 (53%), Gaps = 3/200 (1%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+++++ L NL+ + AGV+++LA K FA W F +Y++ +T+SS+YE Sbjct: 10 PSPCYIMEEELLRKNLELIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120 L E+FG + H Y+ AY + ++ I FN+++Q +F A G+ Sbjct: 70 ARLALEEFGSKAHTYSPAYTEAGFPEIMRCSSHITFNSLAQFRRFYPMIQADGQGISCGI 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+NP S + L +P P +R G + + + ++G H +CE+ S+ L+ Sbjct: 130 RVNPEYSEVETELYNPCAPGTRFGVMAEQLSDVLPQGIDGFHCHCHCESSSYE-LERTLE 188 Query: 181 NIEKEFGHFITQIEWISLGG 200 ++E +F + Q++W++LGG Sbjct: 189 HLEAKFSRWFPQLKWLNLGG 208 >gi|330952171|gb|EGH52431.1| diaminopimelate decarboxylase [Pseudomonas syringae Cit 7] Length = 279 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 15/237 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLSVLARLGAGFDIVSRGE 85 Query: 63 VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + E ++ ++ A+ + +L + + A +L+ Sbjct: 86 LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQGVAAELNVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170 I LR+NP V ++ G + I+ V G+ H + Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205 Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 + F L ++ G + I LGGG+ +D +K E+ Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRER 262 >gi|289672833|ref|ZP_06493723.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae FF5] Length = 205 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 8/187 (4%) Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIVTNT 241 G + I LGGG+ +D +K E+ + + + EPG IV N Sbjct: 13 RLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANA 72 Query: 242 TTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---ATIYPNTGPYTAMVCGRSC 297 L T V + IVD+++ + L A ++ P + G C Sbjct: 73 GALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAVRPRDSEPRAYDIVGPIC 132 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 GD + + GD ++ Y + +N + + + R Sbjct: 133 ETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRE 191 Query: 358 SYNDYYN 364 + + + Sbjct: 192 TVAELFA 198 >gi|126699417|ref|YP_001088314.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile 630] gi|115250854|emb|CAJ68678.1| Pyridoxal-dependent decarboxylase, group IV decarboxylase family [Clostridium difficile] Length = 403 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 62/394 (15%), Positives = 129/394 (32%), Gaps = 51/394 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D+ ++ G L ++K + ++ + G +SS EVM Sbjct: 15 PCYIYDETNIIEKCKELKN--NILGFDFLYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 72 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + Y+ K + + II ++++++ ++K ++K+ + I Sbjct: 73 ISSKCGVSKDDIYYSSPGKTEIDIETVLDKCIIIADSITEIELINKISKKHNQKVKIGIR 132 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCFS 176 + F + D + S+ G +D + +V G+ H + F Sbjct: 133 INPD---FTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDFEKLG 189 Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSE------- 223 + IE+I+ G G+ + + + K + Sbjct: 190 HYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIAFTNSN 249 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD----------- 271 ++ +E G IV + ++DI + K +IV + + + Sbjct: 250 TLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIENITC 309 Query: 272 -----------YLLYQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + S ++ N V G C + D+ K IGD IS Sbjct: 310 GVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLKKANIGDLIS 369 Query: 320 FEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352 + Y+ + F+ P K DG I+ Sbjct: 370 ISNAGSYSYSLSPLLFSSYEFPKQYYKRKDGYIE 403 >gi|70986558|ref|XP_748770.1| ornithine decarboxylase [Aspergillus fumigatus Af293] gi|66846400|gb|EAL86732.1| ornithine decarboxylase, putative [Aspergillus fumigatus Af293] Length = 443 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 106/368 (28%), Gaps = 40/368 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ + +L+ L+ + V+ A+KC + L++ G +S E+ Sbjct: 37 FFVGNLDSVLDRLEEWRR--ELPFVQPFYAVKCNDNKTLLTLLSRAGTGFDCASKKEMQQ 94 Query: 66 GHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + E + +D A D I+ ++ +L K + I LR+ Sbjct: 95 ILQLGVNPERIIFAAPRKAEDYINYAHEHGIDKIVVDSEDELRKLAEIV--PSAMIFLRL 152 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 S+ L++ V G+ FH + + Sbjct: 153 RADDPTSRVRLSEKFGSDLLEARGILQVAVDLSVKVTGICFHVGSAALDPGAYVRAIAMA 212 Query: 183 EKEFGHF-----ITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + + + I I +GGG + F + +Q EPG Sbjct: 213 REVYDYNETLSSKHPILIIDIGGGFTESNFRLLAPAVRSAADMYFGGETGIQWVAEPGRF 272 Query: 237 IVTNTTTLNTTVLD-----ISENIKNLVIVDSSVEAHVPDYLL----------------- 274 IV+ L VL + E V D + Sbjct: 273 IVSEAFYLVCRVLGTRKRLVEYVDGPNQNHYFHAELFVNDGIYQNFLNALVEGYIPTPVP 332 Query: 275 ----YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329 + Y+ V G++C D + ++ GD + F + Y Sbjct: 333 LDPSGRPYGLPEREDKSYSYTVWGQTCCGADKIKSNCRLRCEMQAGDLLCFPSMGAYTHV 392 Query: 330 RKNWFNGI 337 + FNG Sbjct: 393 TASGFNGF 400 >gi|282862736|ref|ZP_06271797.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE] gi|282562422|gb|EFB67963.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE] Length = 469 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 116/371 (31%), Gaps = 36/371 (9%) Query: 9 IDKQKLLNNLDTALYIRKN-AGVKLL--LALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +D Q + +++ + GV +L A K + + L G +S E+ L Sbjct: 44 LDAQGVRHSVAALRDAFEAVPGVSVLHTFAAKAASLVPVLRLLAACGMGCEVASPGELRL 103 Query: 66 GHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGLRI 122 E F ET + A E+ L+ + ++ +L + + + + +GLRI Sbjct: 104 AVEAGFAPETIVLDSPAKTLDELRLALALGVAVNADSFDELRRIGELRSPESASVLGLRI 163 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLC 174 NP V S+ G +D + +E + L H + Sbjct: 164 NPQVGGGSIGAMSTATAASKFGVPLRDPGVREQVVRSFAERPWLTRLHAHVGSQGCPLEL 223 Query: 175 FSAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFS 222 + + + +I I +GGG+ D + + Sbjct: 224 IAEGVAETYRLAEEINEAVGARRITGIDIGGGLPVNFADEEDRPAFSDYVNVLRAAAPGL 283 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYLLYQ 276 + + E G +++ + V + + ++ +PD + Sbjct: 284 FEGRYGLVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQVATRTVFMPDAWPLR 343 Query: 277 ESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 A P + G C AGD+ ++ GD ++ D Y + Sbjct: 344 IGAFDGQGRPRGGPPMVQDIAGPCCFAGDVVAHARELPELREGDFVALYDTGAYYFSTPW 403 Query: 333 WFNGINMPTIA 343 +N + P + Sbjct: 404 AYNSLPRPAVY 414 >gi|255077437|ref|XP_002502359.1| adenosylmethionine/pyridoxal dependant decarboxylase fusion protein [Micromonas sp. RCC299] gi|226517624|gb|ACO63617.1| adenosylmethionine/pyridoxal dependant decarboxylase fusion protein [Micromonas sp. RCC299] Length = 1039 Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 67/415 (16%), Positives = 120/415 (28%), Gaps = 70/415 (16%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 ++D ++ A+KC G+ L +S EV + Sbjct: 629 VVDLGVVMRRWRYWRATIPR--AMPHYAVKCNPDTGVLAILAALGSSFDCASATEVDMVM 686 Query: 68 E-KFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K A F++V++L+K + A ++ + LR + Sbjct: 687 ALGVTPDRIIYANPCKMPAHLARVRDCGVGLTTFDSVAELHKIYELAPEMKVVLRLRADD 746 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + +L + E + +V G+ FH + F L+ Sbjct: 747 PDARC--VLGNKFGAEPPEIEPLLTAAKHLGIHVEGVAFHVGSGATNPRAFRVALERARL 804 Query: 185 EF----GHFITQIEWISLGGGIHFTDKDYPVKD-------------FCQRLKEFSEKYSV 227 F + ++ + +GGG + + + + F E V Sbjct: 805 AFDIAERVGLPPLKLVDIGGGFSGSVRTVAATNDSDVTLTEVAKTVNAALEEFFPESSGV 864 Query: 228 QIYLEPGEAIVTNTTTLNTTVL-------------------------DISENIKNLVIVD 262 +I EPG TTTL T V + + L+ Sbjct: 865 RIISEPGRYFAEATTTLATMVFSRRIRSEEDGSVAKGGDTHQYFVSDGLYGMMNCLLYDH 924 Query: 263 SSVEAHVPDYLLYQE-----------------SATIYPNTGPYTAMVCGRSCLAGDIFGE 305 +S+ A + + Y + V G +C D E Sbjct: 925 ASITARILPVSTNAAALAGGDLNGIVPRGVYSNEEDTNGLTKYPSTVFGPTCDGIDKVLE 984 Query: 306 FHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI----AVKNVDGTIKAIRE 356 V IGD + F + Y ++ + FNG + + VDG IR Sbjct: 985 NTLLPEVSIGDWLLFPHMGAYTVSAGSNFNGFDCAGVRKYYVASIVDGDPDEIRR 1039 >gi|163840434|ref|YP_001624839.1| diaminopimelate decarboxylase [Renibacterium salmoninarum ATCC 33209] gi|162953910|gb|ABY23425.1| diaminopimelate decarboxylase [Renibacterium salmoninarum ATCC 33209] Length = 419 Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 54/383 (14%), Positives = 111/383 (28%), Gaps = 42/383 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA-----GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 P Y+ D L ++L + GV++L A+K + T + +DG SS Sbjct: 33 PAYVYDLAHLRSHLVAIKAALSHPASGGSGVEILYAVKANPDAEVVRTAAEILDGLEVSS 92 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + K A+ + +V +L + A + Sbjct: 93 GGEITHVRALLPDARLIFGGPGKTDAELSTALAAGVHRFHVESVDELRRLNALAAEAGIT 152 Query: 118 IGLRINPSVSYSKFILA------DPNRPFSRLGEKCKDKIESEIKN-------VNGLMFH 164 + ++ S G ++ + + ++G+ H Sbjct: 153 AEILFRVNIQAGITSGNSSTAALTMGGVPSPFGMDPEEAALAAAQLETMPNITLHGVHAH 212 Query: 165 NNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQR 217 + + ++ +++GGG+ + + D+ R Sbjct: 213 LASGVDSATGAAEAEDIARWARSFAAEHGLELSELNVGGGMSVDYLRTAEPFDWSDYGSR 272 Query: 218 LKEFSEKYSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275 L +EKY + +EPG AI + + V ++ + V S H+ Sbjct: 273 LNSLAEKYPEFTFQIEPGRAISAYSGWYLSRVQELKRSHGKWFAVCSGGTHHLRTPAAKG 332 Query: 276 Q------------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + + + G+ C D+ + GD + F Sbjct: 333 HSQPLSVLQVAEWDRPWERASLQENSVSFVGQLCTPKDLLARDVPVSQISAGDTVIFGLA 392 Query: 324 AGYNINRKNW-FNGINMPTIAVK 345 Y +N + F P I Sbjct: 393 GAYALNISHRDFLMHPQPEILHV 415 >gi|254975445|ref|ZP_05271917.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile QCD-66c26] gi|255092832|ref|ZP_05322310.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile CIP 107932] gi|255314575|ref|ZP_05356158.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile QCD-76w55] gi|255517249|ref|ZP_05384925.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile QCD-97b34] gi|255650355|ref|ZP_05397257.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile QCD-37x79] gi|306520316|ref|ZP_07406663.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile QCD-32g58] Length = 403 Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 127/394 (32%), Gaps = 51/394 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D+ ++ G L ++K + ++ + G +SS EVM Sbjct: 15 PCYIYDETNIIEKCKELKN--NILGFDFLYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 72 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E Y+ K + + II ++++++ ++K ++K+ + I Sbjct: 73 ISSECGVSKYDIYYSSPGKTEIDIETVLDKCIIIADSITEIELINKISKKHNQKVKIGIR 132 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCFS 176 + F + D + S+ G +D + +V G+ H + F Sbjct: 133 INPD---FTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDFEKLG 189 Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFC---------QRLKEFSE 223 + IE+I+ G G+ + + + S Sbjct: 190 HYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIVFTNSN 249 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD----------- 271 ++ +E G IV + ++DI + K +IV + + + Sbjct: 250 TLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIENITC 309 Query: 272 -----------YLLYQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + S ++ N V G C + D+ K IGD IS Sbjct: 310 GVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLKKANIGDLIS 369 Query: 320 FEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352 + Y+ + F+ P K DG I+ Sbjct: 370 ISNAGSYSYSLSPLLFSSYEFPKQYYKRKDGYIE 403 >gi|156550618|ref|XP_001604448.1| PREDICTED: similar to ENSANGP00000020224 [Nasonia vitripennis] Length = 423 Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 55/372 (14%), Positives = 118/372 (31%), Gaps = 37/372 (9%) Query: 23 YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVA- 80 +I+K V A+KC + L +S E++ + + + + Sbjct: 50 WIQKIPRVVPYYAVKCNPNPTIIKVLAALGGHFDCASKGEIVQVMQYEVPSDKIIFANPI 109 Query: 81 -YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139 + A DT+ ++ +L K + I +R + +V ++ ++ Sbjct: 110 KFPSHLEYARKVGVDTMTADSEEELKKIRKLYPDAKVVIRIRCDSTVKTARTH-CLDDKF 168 Query: 140 FSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG----HFITQ 192 I+ ++G FH + + + + Sbjct: 169 GCDHSSDAVQLIKMTLDLGLQLHGFSFHAGSPCEDAVAICRGIYRCKDLIDTAKTMGCRD 228 Query: 193 IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--YSVQIYLEPGEAIVTNTTTLNTTVLD 250 ++ I +GGG + + + + E SV+I EPG IV + V+ Sbjct: 229 VKLIDIGGGFPGERD-FILDEVTNMVNNALEDIDSSVEIISEPGRFIVASACNSAAYVIG 287 Query: 251 ISENIKNLVIVDSS--------------VEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 +K + + + + Y + V G + Sbjct: 288 KKTVMKENQKTFMYYITDGVYGSFNEELCTNNYFRSPVSSFRNSTSTDDEKYPSSVWGPT 347 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 C + D+ + +GD + + D+ Y+ + N FNG+ +P + +R Sbjct: 348 CDSFDVVLKNSMLPEFNVGDWLVWADIGAYSTSCANEFNGLQIPKV--------HPIMRR 399 Query: 357 FSYNDYYNN-LS 367 + D+ N LS Sbjct: 400 KDWLDFLLNYLS 411 >gi|254579054|ref|XP_002495513.1| ZYRO0B13112p [Zygosaccharomyces rouxii] gi|238938403|emb|CAR26580.1| ZYRO0B13112p [Zygosaccharomyces rouxii] Length = 443 Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 104/367 (28%), Gaps = 40/367 (10%) Query: 6 YYLID---KQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +++ D +L N + R+ V+ A+KC + L +S E Sbjct: 68 FFVCDIGEVGRLHKN-----WFRELPRVQPYYAVKCNPDAKVLRKLADLGVNFDCASKSE 122 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E Y K + + + K K ++ LR Sbjct: 123 IEKVLAMGVNPERIIYANPCKASSFIRYAAGAKVLKSTFDNVEELHKIKKYHPDSQLLLR 182 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I S ++ L+ + ++ N+ G+ FH F +K+ Sbjct: 183 IATDDSTAQCRLSTKYGCEMEKVDTLLQCVKDLGLNLVGVSFHVGSGASDFTSLYTAVKD 242 Query: 182 IEKEFGH----FITQIEWISLGGGIHFTDKDYPVKD-FCQRLKEFSEKYSVQIYLEPGEA 236 F ++ ++ + +GGG + F + + I EPG Sbjct: 243 SRTVFDRAQDFGLSNLKLLDVGGGFQLESFHDSSAVLRSALDEFFPQGCGIDIIAEPGRY 302 Query: 237 IVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDY----------LLYQ 276 T TL V+ + N ++ + H Y Sbjct: 303 FAATTFTLAANVIAKRKLSSNESMLYINDGVYGNMNCILFDHQEPTPRTLYHNGEFYYYD 362 Query: 277 -----ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINR 330 + P + G +C D + ++ + GD I F + Y + Sbjct: 363 FNSTSPRSFQKGFQYPQKVSIWGPTCDGLDCITKEYYIKHDLVPGDWIFFPSLGAYAASA 422 Query: 331 KNWFNGI 337 FNG Sbjct: 423 ATPFNGF 429 >gi|290999347|ref|XP_002682241.1| predicted protein [Naegleria gruberi] gi|284095868|gb|EFC49497.1| predicted protein [Naegleria gruberi] Length = 430 Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 59/386 (15%), Positives = 105/386 (27%), Gaps = 44/386 (11%) Query: 2 IKT---PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 + T P+Y++D ++L + T + V A+KC L + G + Sbjct: 42 LPTIEEPFYVVDLSEVLGQVKTWRE--ELPRVTPFYAIKCNPNPQFLSVLEKLGCGFDVA 99 Query: 59 SLYEVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 S E+ Y + +K K Sbjct: 100 SRDEIERVKHVITNNDELANRCIYANPCHPISHLRYARTSGVQYTTADNIDELYKLKKYW 159 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK--- 170 +I +RI S+S + + + D I+ N+ G+ FH Sbjct: 160 PEAQIVIRIKTDDSHSLCQFSTKFGAELSVAFEMVDIIKDLGLNLAGVSFHVGSGCNDVN 219 Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYS 226 + F ++ + LGGG + + + +K ++ Sbjct: 220 SFIKAIRDARAVFDYGFKVLNKKLWLLDLGGGWQGRSQKHGNAAFISVARTIKPLLDELF 279 Query: 227 V-----QIYLEPGEAIVTNTTT----------LNTTVLDISENIKNLVIVDSSVEAHVPD 271 QI EPG I +T T + VL + P+ Sbjct: 280 PVESGTQIIAEPGRYIAHSTHTLITSIFSRRIEKSRVLYYIYEGVYHSFNCLIFDHAEPE 339 Query: 272 YLLYQESATIYPNTGPY----------TAMVCGRSCLAGDIFGEFH--FEKPVKIGDRIS 319 I N + G +C + D+ + ++ GD I Sbjct: 340 LKFLSYEELISDNVTDEVENRVGHSDKAVTLYGSTCDSMDVIIKDSHQLPNCLECGDVIF 399 Query: 320 FEDVAGYNINRKNWFNGINMPTIAVK 345 E+ Y + FNG I Sbjct: 400 VEEFGAYTNSASTEFNGFKSAKIYYI 425 >gi|260683468|ref|YP_003214753.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile CD196] gi|260687064|ref|YP_003218197.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile R20291] gi|260209631|emb|CBA63307.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile CD196] gi|260213080|emb|CBE04462.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile R20291] Length = 414 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 127/394 (32%), Gaps = 51/394 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D+ ++ G L ++K + ++ + G +SS EVM Sbjct: 26 PCYIYDETNIIEKCKELKN--NILGFDFLYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 83 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E Y+ K + + II ++++++ ++K ++K+ + I Sbjct: 84 ISSECGVSKYDIYYSSPGKTEIDIETVLDKCIIIADSITEIELINKISKKHNQKVKIGIR 143 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCFS 176 + F + D + S+ G +D + +V G+ H + F Sbjct: 144 INPD---FTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDFEKLG 200 Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFC---------QRLKEFSE 223 + IE+I+ G G+ + + + S Sbjct: 201 HYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIVFTNSN 260 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD----------- 271 ++ +E G IV + ++DI + K +IV + + + Sbjct: 261 TLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIENITC 320 Query: 272 -----------YLLYQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + S ++ N V G C + D+ K IGD IS Sbjct: 321 GVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLKKANIGDLIS 380 Query: 320 FEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352 + Y+ + F+ P K DG I+ Sbjct: 381 ISNAGSYSYSLSPLLFSSYEFPKQYYKRKDGYIE 414 >gi|254488014|ref|ZP_05101219.1| decarboxylase, pyridoxal-dependent [Roseobacter sp. GAI101] gi|214044883|gb|EEB85521.1| decarboxylase, pyridoxal-dependent [Roseobacter sp. GAI101] Length = 390 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 120/354 (33%), Gaps = 22/354 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ ++++ D + A+K A + L + G ++S E+ Sbjct: 32 PTLVVSRERVGIQYDAL--SAGLGNAHIHYAVKANPAPEIIRLLVERGSGFDAASRQEIE 89 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L + ++ ++ K A + +F + K ++ +R+ Sbjct: 90 LCLSQGADPKSISFGNTIKRGVDIAFAHSIGVTLFAADCESELDKIATHAPGARVYIRLI 149 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI- 182 S + + L L D +S GL FH + + ++ +L + Sbjct: 150 VENSLADWPLTRKFGCADTLLPTLLDYAKSVGLVPYGLSFHVGSQTRKAEYWNPVLDQVA 209 Query: 183 --EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYSVQIYL--EPGE 235 ++ +++GGG D P + E++ Y+ EPG Sbjct: 210 PLWHAAKAAGHDLQLLNIGGGFPAYHGDVVDAPRGYAAAVMAAVKERFGEIAYIMAEPGR 269 Query: 236 AIVTNTTTLNTTVLDISEN----IKNLVIVDSSVEAHVPDY--LLYQESATIYPNTGPY- 288 +V + VL +S + V +D + + + + + GP Sbjct: 270 GMVAEAGHIAAEVLLVSRKSAVAERRWVYLDIGRFSGLAETEGEAIRYEFITAHDGGPVG 329 Query: 289 TAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 ++ G SC + DI E + ++ GD+I ++ Y + + FNG Sbjct: 330 PCVMAGPSCDSADILYERNPVDLPLALRDGDKIMIKNCGAYTSSYSSVGFNGFP 383 >gi|313623109|gb|EFR93382.1| diaminopimelate decarboxylase [Listeria innocua FSL J1-023] Length = 325 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 97/316 (30%), Gaps = 34/316 (10%) Query: 86 IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRINPSVSYSKFILADPNRPFSRL 143 A+ + + +++ +D + ++K + +R+ P + + S+ Sbjct: 9 HMALDYGIGCFVIDNYYEISLLEDILIERNEKAAVLIRVTPGIEAHTHDYILTGQDDSKF 68 Query: 144 GEKCKD----------KIESEIKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHF 189 G + S ++ GL H + F ++ + + G Sbjct: 69 GFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHGTL 128 Query: 190 ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKEFSEKYS----------VQIYLEPGEAIV 238 + ++LGGG + + +++ ++ +I++EPG ++V Sbjct: 129 GFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEVRDVANSNDIAIPEIWIEPGRSLV 188 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQESATIYPNT----GPYTAMV 292 T V E + + ++ L + T + Sbjct: 189 GEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPEKVAEETVAI 248 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G+ C +GD+ G+ ++ Y + +N I P + Sbjct: 249 AGKCCESGDMLIWDLPLPKSDAGEILAVFCTGAYGYAMASNYNRIPRPPVVFVENGMDKL 308 Query: 353 AIREFSYNDYYNN-LS 367 + +Y + N LS Sbjct: 309 IVARETYENLVQNDLS 324 >gi|255100982|ref|ZP_05329959.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile QCD-63q42] Length = 403 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 62/394 (15%), Positives = 129/394 (32%), Gaps = 51/394 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D+ ++ G L ++K + ++ + G +SS EVM Sbjct: 15 PCYIYDETNIIEKCKELKN--NILGFDFLYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 72 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + Y+ K + + II ++++++ ++K ++K+ + I Sbjct: 73 ISSKCGVSKDDIYYSSPGKTEIDIETVLDKCIIIADSITEIELINKISKKHNQKVKIGIR 132 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCFS 176 + F + D + S+ G +D + +V G+ H + F Sbjct: 133 INPD---FTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDFEKLG 189 Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSE------- 223 + IE+I+ G G+ + + + K + Sbjct: 190 HYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIAFTNSN 249 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD----------- 271 ++ +E G IV + ++DI + K +IV + + + Sbjct: 250 TLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIENITC 309 Query: 272 -----------YLLYQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + S ++ N V G C + D+ K IGD IS Sbjct: 310 GVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNIKLKKANIGDLIS 369 Query: 320 FEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352 + Y+ + F+ P K DG I+ Sbjct: 370 ISNAGSYSYSLSPLLFSSYEFPKQYYKRKDGYIE 403 >gi|291527362|emb|CBK92948.1| Diaminopimelate decarboxylase [Eubacterium rectale M104/1] Length = 400 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 50/392 (12%), Positives = 114/392 (29%), Gaps = 42/392 (10%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTS 57 M +TPYY+ D + G + L ++K + L + +D Sbjct: 1 MRQTPYYVFDTDEFAKRAAMIRAALDCKGGRRIPLCFSIKANPF--LLHRLPEGLDHVEV 58 Query: 58 SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL 114 S E+ + E+ Y+ K+ + ++ + Sbjct: 59 CSPGELEICIALGVKPESIIYSGVMKEKCDIERAVSYGAGILTCESIRHAALISEV-MLE 117 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167 G ++ ++ G D V G+ +++ Sbjct: 118 RMPEGAHEAEFAETKTHVILRLTS-GNQFGMSLDDIEYIISHPDEFKGIAVMGIHYYSGT 176 Query: 168 E---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQ 216 + K + + + + + + G G+ + ++ + Sbjct: 177 QKSLRKINKDLEKIKSALSVLKEKYSFEPQLVEYGPGLCVEYFEDDWQEREKRSLDEAAE 236 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV------- 269 L+EF+ +Y + +E G + + T V D+ + H+ Sbjct: 237 VLREFAVEYPLG--IEMGRFLAASCGKYYTQVKDLKSTGDANYAILDGGIHHLNYFGQRM 294 Query: 270 ----PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 P +Y+ + +CG C D+ K +++GD + F Sbjct: 295 AMQVPPISIYRAAGVELTELPDTDYTLCGSLCTVADVLVREVKLKKLELGDVLEFGHCGA 354 Query: 326 YNINRKN-WFNGINMPTIAVKNVDGTIKAIRE 356 Y++ F +P I + + + +RE Sbjct: 355 YSVTEAPALFLSRQLPAIYAYSKEYGYECLRE 386 >gi|182434566|ref|YP_001822285.1| putative decarboxylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463082|dbj|BAG17602.1| putative decarboxylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 464 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 112/371 (30%), Gaps = 38/371 (10%) Query: 9 IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 ID + + ++ GV A K + + L G +S E+ L Sbjct: 43 IDTEGVRASVGALHDAFAATPGVLHTFAAKACSLVPVLRLLADCGMGCEVASPGELRLAL 102 Query: 68 E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGLRINP 124 E F + A EI L+ + +++ +L + A +GLR+NP Sbjct: 103 EAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLDELRRVDALRAPGTASVLGLRVNP 162 Query: 125 SVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFS 176 V S+ G +D + E + L H + + Sbjct: 163 QVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVGSQGCPLDLIA 222 Query: 177 AMLKNIEKEFGHFI-----TQIEWISLGGGIH---------FTDKDYPVKDFCQRLKEFS 222 A + + ++ + +GGG+ T +Y FS Sbjct: 223 AGVAQTYELAEEINATPGVRRVTSLDIGGGLPVNFADETVRPTYPEYVAALTAAAPGLFS 282 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYL--- 273 +Y + E G +++ + V + + ++ +PD Sbjct: 283 GRY--SLVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLR 340 Query: 274 LYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + P GP A V G C AGD+ + GD + D Y + Sbjct: 341 IGAFGPDGAPKGGPPLAQDVAGPCCFAGDVVAYGRELPELAEGDLVVLYDTGAYYFSTPW 400 Query: 333 WFNGINMPTIA 343 +N + P + Sbjct: 401 AYNSLPRPAVY 411 >gi|295694996|ref|YP_003588234.1| Orn/DAP/Arg decarboxylase 2 [Bacillus tusciae DSM 2912] gi|295410598|gb|ADG05090.1| Orn/DAP/Arg decarboxylase 2 [Bacillus tusciae DSM 2912] Length = 477 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 55/407 (13%), Positives = 109/407 (26%), Gaps = 53/407 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ + L N+ V L L+ + + + + G S+ Sbjct: 42 GTPLYVYSESHLWRNVRQLHDAFHYEHVPADLFFPLRASSNLAILQAIGRTGIGVEVGSM 101 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDK------- 110 E+ F GE A + E+ + I +++S++ Sbjct: 102 GELKKALTAGFSGERILLAGADRPPELLSHALERGVRAISTDSLSEIETLSTLGTRMARP 161 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 A L + + P+ L + + + GL Sbjct: 162 ADILLEVDPVLSFPNHRPPTPYYLKSGIDRHDLLSFAEQTLNYPGIRIRGLHVQVGTYRW 221 Query: 171 SFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE------ 220 + L+ +E+ + + LGG + ++ + + E Sbjct: 222 KPETLRRVGEIALELLEQIRSRLGVDGDVLFLGGELPLQVQELDLPSSDEAAAELDQDLL 281 Query: 221 ---------FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV---------IVD 262 ++ L PGE ++ N L TTV + + Sbjct: 282 AARTLAELLTQYDRPLRFVLSPGERLIANAGLLLTTVRQVKSKSIRDEEGNITDIVRWLI 341 Query: 263 SSVEAHVPDYLLYQESAT------IYPNTGPYTAMVCGRSCLAGDIFGE-------FHFE 309 ++ + S T + G D F + + Sbjct: 342 VDAGLNILPQWPGEPSNRAALSVTRAEQTHDVPFKIGGPLYDHRDYFRDGAQGSEYYLLP 401 Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 + GDR++F D Y + + N A+ G + IR Sbjct: 402 GNTRPGDRLAFLDTGAYVLEYMSEANSFPRAGAAMIRTSGQVHLIRH 448 >gi|218962050|ref|YP_001741825.1| diaminopimelate decarboxylase (DAP decarboxylase) [Candidatus Cloacamonas acidaminovorans] gi|167730707|emb|CAO81619.1| diaminopimelate decarboxylase (DAP decarboxylase) [Candidatus Cloacamonas acidaminovorans] Length = 449 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 58/395 (14%), Positives = 127/395 (32%), Gaps = 33/395 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ ++++ L + V ++ + K + + +Q S Sbjct: 46 GTPLFVFSEKQIRRTYRRLLETIRIHYPKVDIVWSYKTNYLAAICNIFHQEGAPAEVVSR 105 Query: 61 YEVMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E G +N + + ++ + I + + +L + ++ A++L K Sbjct: 106 MEYEKARSNGIPGNRIYFNGPSKRKQDLQIAIKEGAYIHIDHLEELYQIENIAEELAIKP 165 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGE---KCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 + I ++ + GE + I + GL H + Sbjct: 166 KVAIRVNMDTGISPMWTRFGFNYENGEAYRTVQRLISGNKVQLVGLHTHIGTFILDPNAY 225 Query: 176 SAML----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------------ 219 + +F +++I +GGG + + Sbjct: 226 YWAATKLLNFAQTIKDNFGIVLDYIDMGGGFASNNTLIDQYTPGELASPSFEQYAEAIGT 285 Query: 220 -----EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272 + ++Y ++ LE G ++ + L +VL + VI+D+ V ++ + Sbjct: 286 AFNASHYVKEYHPRLILETGRVLIDESGYLIASVLGKKNLPTGERAVILDAGVNINITAW 345 Query: 273 LLYQESATIYPNTGPYTAMVC-GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 Q P G Y V G C+ D+ + GD + V YN+ + Sbjct: 346 WYKQRVLPTKPFPGTYQNTVFYGPLCMNIDVIRSAMPFPDLYYGDTVIISPVGAYNVTQW 405 Query: 332 NWFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365 F P + + N G + IR + +D + Sbjct: 406 MQFIEY-RPNVCLINETGEVDVIRSQEDLSDLTSR 439 >gi|257791928|ref|YP_003182534.1| Diaminopimelate decarboxylase [Eggerthella lenta DSM 2243] gi|257475825|gb|ACV56145.1| Diaminopimelate decarboxylase [Eggerthella lenta DSM 2243] Length = 412 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 61/379 (16%), Positives = 119/379 (31%), Gaps = 34/379 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D Q L + + + +KL A+K + + D + S E Sbjct: 16 PTPLYLFDHQVLNDRITRLRASLP-SRIKLCYAMKANPF--IVLEASALADCVEACSPGE 72 Query: 63 VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTI----IFNTVSQLNKFKDKAQKLHKK 117 V++ + E + +KD L D I + QL A ++ Sbjct: 73 VLICANAGVPFEKIVLSGVWKDRRCLDDLFQADRIPHRFTIESSQQLKDLVVLANAYRRR 132 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + S S ++F + G K I + G+ +++ + S Sbjct: 133 VNVLFRLS-SENQFGVDSATLKELIAGCKDDPFIS-----IQGIQYYSGTQKTSLKKLDR 186 Query: 178 MLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------- 224 L + + ++ I G G+ D + E + Sbjct: 187 ELNKLHRIVAEVEAACSVKLNEIEYGPGLPVEYFDEDEERARSAQDEPVAELATLLDGFP 246 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + + LE G +I + T+V+D+ + + Y + Sbjct: 247 FEGDVVLELGRSIAADCGAYLTSVVDVKTTSGQNYAIVDGGMHQISYYGHSMAMKSPVFR 306 Query: 285 T------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGI 337 +CG C DI + + +GD ++F Y F Sbjct: 307 KVGATAGAAQPWNICGALCTVNDILAKQAPIVDLSVGDVLAFSRAGAYCATEGRALFLSR 366 Query: 338 NMPTIAVKNVDGTIKAIRE 356 ++P++ V++V G ++ R Sbjct: 367 DLPSVVVRDVSGNMRIARH 385 >gi|37524753|ref|NP_928097.1| hypothetical protein plu0752 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784178|emb|CAE13047.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 419 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 46/378 (12%), Positives = 102/378 (26%), Gaps = 36/378 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP++ ++ + + + + A+K + L+Q ++G +S E Sbjct: 43 QTPFFAYSRKHIDQQVCLLRKYLPE-KISIHYAIKANPFVPLIHHLSQKIEGFDVASANE 101 Query: 63 VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + L E ++ D E+ ++ + ++++L + + ++KL + Sbjct: 102 MALALNTGVSPEDISFAGPGKTDTELKRAIAAQVLLNVESLNELRRIQILSEKLGLCARV 161 Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKDKIESEIK--------NVNGLMFHNNCENKS 171 + + Y+ R G E+ + G + +N Sbjct: 162 SLRINPDYNLNSSGMKMGGGPRQFGMDVVYVPEALMFIRDYPDSLVFEGFQIYPGSQNLC 221 Query: 172 FLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + +LGGG + + K Sbjct: 222 AEHLIEAQNKALNLVIELSHSAPSPVRRFNLGGGFGVPYFQGNTELNITEVGNAMHKLVE 281 Query: 226 -------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY------ 272 V+I LE G +V ++ T +++ + +V H Sbjct: 282 RAEKFLPEVEIILELGRYLVASSGIYVTKIVERKISHDMTFLVTDGGMNHHLSASGNLGQ 341 Query: 273 ----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 T + G C DI GD + Y + Sbjct: 342 LIRRNYPAIIGNKIKGEKRETVNIVGPLCTPLDILVHQGDMSVATPGDLVVIFQSGAYGL 401 Query: 329 NRK-NWFNGINMPTIAVK 345 + N F + Sbjct: 402 SASPNNFLSQTNAVEVLV 419 >gi|50303419|ref|XP_451651.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640783|emb|CAH02044.1| KLLA0B02673p [Kluyveromyces lactis] Length = 441 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 108/363 (29%), Gaps = 33/363 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + L + + V A+KC + L +S E+ Sbjct: 68 FFVCDLGEI-SRLRNY-WTQILPRVTPFYAVKCNPNIEIIKRLASMSTNFDCASKSEIEK 125 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K + + +K K ++ LRI Sbjct: 126 VLACGVDPERIIYANPCKASSFIRFAAKNGVKKSTFDNIDELYKIKKYHPESELLLRIVT 185 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S ++ L+ + ++ N+ G+ FH F + +K+ K Sbjct: 186 DDSSAQCRLSTKYGCELDDVPVLLETVKELGLNLIGVSFHVGSGASDFSTVTQAVKDGRK 245 Query: 185 EFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV---QIYLEPGEAI 237 F + ++ + +GGG F L F + + EPG Sbjct: 246 VFDMAESRGLPALKMLDVGGGYQFDTITEVADVLNAALDYFFPQETHSDVSFIAEPGRYF 305 Query: 238 VTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN--- 284 V TL TV+ I N ++ + H + Sbjct: 306 VATAFTLAATVIGKRNNSDSESMIYINDGVYGNMNCILFDHQEPSPRVLYHKNRFHYMDI 365 Query: 285 ---------TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWF 334 Y + G +C D + ++ K + IGD + F+++ Y + F Sbjct: 366 NSSSKAKCDACNYKVSIWGPTCDGLDCVSKEYYMKYDLDIGDWVHFDNIGAYTCSAATPF 425 Query: 335 NGI 337 NG Sbjct: 426 NGF 428 >gi|32526681|dbj|BAC79204.1| putative ornithine decarboxylase [Oryza sativa Japonica Group] Length = 414 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 100/358 (27%), Gaps = 24/358 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K+++ V+ A+KC M L G +S E+ Sbjct: 52 FHVFDLAKVVDLHRGWRRAL--PDVRPCYAVKCNPDGAMLAALAALGAGFDCASRAEIEA 109 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN- 123 T Y K + + T + + + L Sbjct: 110 VLALGVRPATIVYANPCKPEAHLEYAAEVG-VNLTTYDSEEEVAKVRRCHPRCELLLRIK 168 Query: 124 -PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 P +K L + E V G+ FH + ++ Sbjct: 169 APDSGDAKVDLGLKYGANPDEVLPLLRAAQREGVAVAGVSFHVGSGASRADVYRGAIEAA 228 Query: 183 EKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEA 236 + F + + + +GGG + F + V++ EPG Sbjct: 229 REAFDAAAALGMPPMRVLDIGGGFMAGRTFDEAAAVINRALERHFGDLPCVEVIGEPGRY 288 Query: 237 IVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP---- 287 TL V+ + S+ + D+ + + G Sbjct: 289 FAETAFTLAARVIGKRTRGELREYWIDDGLYGSLNCILMDHYVPRPRPLAAAAAGEDTTA 348 Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + + V G +C + D + + +GD + F+D+ Y + FNG I Sbjct: 349 ATTHASTVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTAAGSNFNGFATSAI 406 >gi|84686404|ref|ZP_01014298.1| decarboxylase, pyridoxal-dependent [Maritimibacter alkaliphilus HTCC2654] gi|84665587|gb|EAQ12063.1| decarboxylase, pyridoxal-dependent [Rhodobacterales bacterium HTCC2654] Length = 385 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 50/365 (13%), Positives = 107/365 (29%), Gaps = 24/365 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + P ++D ++ A + A+K + + L ++S Sbjct: 24 VDRPTLVLDVDRVEYQFHQLAQGLGRAN--IHYAVKANPTREIIERLVNIGSHFDAASRA 81 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ L + ++ K A + +F ++ K ++ + Sbjct: 82 EIELCLSQGADPADISFGNTVKKVGDIAFAWHAGVTLFAADAEEELEKIAEHAPGAEVYI 141 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SA 177 R+ S + + L+ GL FH + K + Sbjct: 142 RMIVENSQADWPLSRKFGCRGEKAIDLMAYAVELGLKPVGLSFHVGSQTKRAEMWTGVLD 201 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF-----SEKYSVQIYLE 232 + I ++ +++GGG + + ++ E Sbjct: 202 AVAEIWHRAVAEGYDLDLLNIGGGFPAFYGEAIDAPAAYAARVMDLVTARFGDVPRVMAE 261 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLYQESATIYPN 284 PG +V + VL +S+ + + ++ + + YQ AT Sbjct: 262 PGRGLVAECGAIIAEVLLVSKKSDDDMHRWVYLDIGRFSGLAETEGEAIRYQ-IATPRDG 320 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMP 340 ++ G SC + D+ E +K GDR + Y + + FNG Sbjct: 321 GEMGPCILAGPSCDSADVLYEKRPIMLPLALKSGDRAIIRNAGAYTSSYSSVGFNGFPPL 380 Query: 341 TIAVK 345 + V Sbjct: 381 DVVVL 385 >gi|218885768|ref|YP_002435089.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756722|gb|ACL07621.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 474 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 54/402 (13%), Positives = 105/402 (26%), Gaps = 47/402 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++D L + G L + K G+ L+ G S Sbjct: 54 GTPLLVVDAAALRRRVQDVQAALDEVLPGAMLAYSYKTNCIPGILRMLHDAGVGAEVISP 113 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118 YE L G YN K E A + ++ +++ A++ + Sbjct: 114 YEYWLSESLGVDGGQVVYNGVDKSRESIARAVARGTLVNIDSRDEVDVVLAAAREQRRTA 173 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 + + +++ S DP + ++ L F+ + + Sbjct: 174 RVGLRLALNRSAQFGLDPEGDDLAH-VVRNCLDAPDHADLVALHFNVTSNARHSGYHARC 232 Query: 179 L----KNIEKEFGHFITQIEWISLGGGIH-------------------------FTDKDY 209 L + +I + +GGG + D Sbjct: 233 LSRALDVMSWLAREHGVRIRLLDVGGGFGVETSKNMSGAEYGLYRLFGVQPGAAWMDPFQ 292 Query: 210 PVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 + + + L + + + +EPG + + L T V + E Sbjct: 293 DFRLYLRDLADTLRAFCAQNDLPVPGVCIEPGRLLTSKAELLLTQVKAVKERPGAEPFAI 352 Query: 263 SSVEAH---VPDYLLYQES--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 + P + E+ A+ V GR C D + GD Sbjct: 353 TDAGRLSQAFPCDFEWHEAFLASDLRRPPSRPYTVTGRVCTRSDWLYRGKLLPELATGDV 412 Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 ++ D Y + F + R + Sbjct: 413 LAVMDAGAYFSSYAMNF-AFPRAAVVAVEDGRARVLRRREDF 453 >gi|254571071|ref|XP_002492645.1| Ornithine decarboxylase [Pichia pastoris GS115] gi|238032443|emb|CAY70466.1| Ornithine decarboxylase [Pichia pastoris GS115] gi|328353351|emb|CCA39749.1| ornithine decarboxylase [Pichia pastoris CBS 7435] Length = 466 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 109/370 (29%), Gaps = 39/370 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++L K +K A+KC + + L G +S E+ Sbjct: 87 FFVCDLGEVLRLYKNWCE--KLPRIKPYYAVKCNNDPKLLEVLATLGTGFDCASTGEINT 144 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKKIGLRIN 123 + AY K + T ++ A ++ LRI+ Sbjct: 145 ILNLGVSPDRIAYANPCKSISSVRNAK-KVNVNLTTFDNSDELYKIAKYHPESRLLLRIS 203 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L+ + NV G+ FH F + K+ Sbjct: 204 TDDESAQCRLSTKFGASMSESFDLLRLAKKLQLNVAGVAFHVGSGASDFSAITQATKDSS 263 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAI 237 F ++ + +GGG D + + ++ + I EPG Sbjct: 264 ILFEEGTRLGFKMNILDVGGGFVLQTFDESSRYLREACDQYFPEKLFPELKIIAEPGRYF 323 Query: 238 VTNTTTLNTTVLDISE--------------NIKNLVIVDSSVEAHVPDYLL--------- 274 + TL V+ + + +++ + D+ L Sbjct: 324 AASAFTLACNVIARRMTTQSSDTTTPTAHAMLYVNDGLYNNLNCVLYDHQLPKGKALTIN 383 Query: 275 ----YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNIN 329 Y ++ + + G +C D E + + ++GD I F+++ Y Sbjct: 384 GRFVYDLQFSLPESEKKIPVSIWGPTCDGLDCISEMTYVSSLMEVGDWIFFDEIGAYTSA 443 Query: 330 RKNWFNGINM 339 FNG Sbjct: 444 AATAFNGFQK 453 >gi|326202215|ref|ZP_08192085.1| Orn/DAP/Arg decarboxylase 2 [Clostridium papyrosolvens DSM 2782] gi|325988010|gb|EGD48836.1| Orn/DAP/Arg decarboxylase 2 [Clostridium papyrosolvens DSM 2782] Length = 388 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 52/374 (13%), Positives = 118/374 (31%), Gaps = 30/374 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+Y+ D L N ++ V++ A+K + + +D S E Sbjct: 14 QTPFYIFDTDILANQINKIRTAL-GTDVEICYAMKANPF--VIKEMQDIVDYFEVCSHGE 70 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLS----NCDTIIFNTVSQLNKFKDKAQKLHKK 117 + + YK+ + N ++SQ D A + + Sbjct: 71 FNICELADIDVNKIVMSGVYKNFTDIETMIYEYGNQIIYTIESLSQWKNIADFALEHQRH 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFL 173 + + + + + E ++ ++ ++ G+ F + + +K Sbjct: 131 VRVLLRL------TTGNQFGMDETVIREIIANRNKNPYIDIEGIQFFSGTQKKSTSKFEK 184 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEFSEKYSVQ 228 + + I+ I G G+ + + + + Sbjct: 185 ELEMLDNLCSDLQKQYAFNIKKIEYGPGLPICYFEDNNNVEDLMLDLLAKQIKKLNFKGK 244 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---DYLLYQESATIYPNT 285 I LE G I + T+V+D+ N + H+ + ++ I+ N Sbjct: 245 ITLEIGRFIAASCGFYVTSVVDVKVNNNENFCIVDGGIHHLNYLGQIMGMKKPPIIHWNE 304 Query: 286 G---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPT 341 VCG C D+ + + + GD + F+ V Y++ + F +P Sbjct: 305 KSGEAKEWTVCGSLCTVNDVLVKQYPFVDISRGDTLIFKKVGAYSVTEGISLFLSHELPQ 364 Query: 342 IAVKNVDGTIKAIR 355 + + + + R Sbjct: 365 VLLYSEKCKFRLAR 378 >gi|297609894|ref|NP_001063827.2| Os09g0543400 [Oryza sativa Japonica Group] gi|255679105|dbj|BAF25741.2| Os09g0543400 [Oryza sativa Japonica Group] Length = 408 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 100/358 (27%), Gaps = 24/358 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K+++ V+ A+KC M L G +S E+ Sbjct: 46 FHVFDLAKVVDLHRGWRRAL--PDVRPCYAVKCNPDGAMLAALAALGAGFDCASRAEIEA 103 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN- 123 T Y K + + T + + + L Sbjct: 104 VLALGVRPATIVYANPCKPEAHLEYAAEVG-VNLTTYDSEEEVAKVRRCHPRCELLLRIK 162 Query: 124 -PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 P +K L + E V G+ FH + ++ Sbjct: 163 APDSGDAKVDLGLKYGANPDEVLPLLRAAQREGVAVAGVSFHVGSGASRADVYRGAIEAA 222 Query: 183 EKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEA 236 + F + + + +GGG + F + V++ EPG Sbjct: 223 REAFDAAAALGMPPMRVLDIGGGFMAGRTFDEAAAVINRALERHFGDLPCVEVIGEPGRY 282 Query: 237 IVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP---- 287 TL V+ + S+ + D+ + + G Sbjct: 283 FAETAFTLAARVIGKRTRGELREYWIDDGLYGSLNCILMDHYVPRPRPLAAAAAGEDTTA 342 Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + + V G +C + D + + +GD + F+D+ Y + FNG I Sbjct: 343 ATTHASTVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTAAGSNFNGFATSAI 400 >gi|109001672|ref|XP_001106935.1| PREDICTED: arginine decarboxylase-like isoform 10 [Macaca mulatta] gi|109001675|ref|XP_001107003.1| PREDICTED: arginine decarboxylase-like isoform 11 [Macaca mulatta] Length = 460 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 125/385 (32%), Gaps = 37/385 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L Q G + ++ E+ L Sbjct: 41 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H Y K + + + +++ K K+ L I Sbjct: 99 VQHIGVPASKIIYANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + ++ Sbjct: 159 DDSHSLSRLSLKFGVSLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADVRL 218 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG T+ + + F E V I E G Sbjct: 219 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDILAELGR 278 Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272 VT+ T+ +++ + I +S + ++ Sbjct: 279 YYVTSAFTVAVSIIAKKEVLLDQPGKEEENGSTTKTVVYHLDEGVYGIFNSVLFDNICPT 338 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + Q+ + Y++ + G + D E + + +GD + F+++ Y + + Sbjct: 339 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 396 Query: 333 WFNGINMPTIAVKNVDGTIKAIREF 357 F G I +A+R Sbjct: 397 PFGGTQACHITYAMSRVAWEALRRQ 421 >gi|260437385|ref|ZP_05791201.1| putative pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Butyrivibrio crossotus DSM 2876] gi|292810298|gb|EFF69503.1| putative pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Butyrivibrio crossotus DSM 2876] Length = 402 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 53/382 (13%), Positives = 122/382 (31%), Gaps = 27/382 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +YL+D ++ N + + + K + +N+ S E Sbjct: 19 FYLLDSEQFKKNYLELKNAFSELYSNFNIAYSYKTNYTPKLCKIVNELEGYAEVVSEMEA 78 Query: 64 MLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + E +N ++ L T+ +++ + + A+ K + + Sbjct: 79 ELAIKCGVKPERIIWNGPIKNPDKLKEYLHMGVTVNMDSIEEAEYIQKLAEVTEKTLNVG 138 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I + +++ K I + N++ + F + + + A K Sbjct: 139 IRCNYDVKDGVVSRFGFDIYSEEFKKVLDIVTHTTNLHFVNFQCHFAKRQVEYWPARAKG 198 Query: 182 IEKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSEKYSVQ--- 228 + + E I +GGGI F + K + + +Y Sbjct: 199 MLELLDRINVIPERIDIGGGIFGKMPDFLKEQFPYEVPGYKKYAKSAAAVFAEYFNDKKI 258 Query: 229 ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 + +EPG A+V + TV I + + ++ + I+ Sbjct: 259 KPELIIEPGSALVGDCMKFVGTVKTIKNVRGKYIASVLGSQKNISMTGVNPPMEVIHMGR 318 Query: 286 GPYTA---MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + G +C+ GD+ + + + + D + + Y++ K F N P Sbjct: 319 TTKDYKDLDIVGFTCIEGDVLYKNYN-GKLALDDVLVISNCGSYSLVMKPPFILPNFP-- 375 Query: 343 AVKNVDGTIKAIRE-FSYNDYY 363 + I+ I+ ++ D + Sbjct: 376 VLDISGEEIEVIKRAETFEDIF 397 >gi|149927611|ref|ZP_01915864.1| putative diaminopimelate decarboxylase protein [Limnobacter sp. MED105] gi|149823665|gb|EDM82893.1| putative diaminopimelate decarboxylase protein [Limnobacter sp. MED105] Length = 391 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 50/376 (13%), Positives = 101/376 (26%), Gaps = 34/376 (9%) Query: 3 KTP---YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 TP Y+ + L + +L A K + +TL ++DG ++S Sbjct: 16 GTPPWCAYVYNLPALAAHAQYMKRHLPR-NCELYYAAKANPDVRLLNTLAPHVDGFEAAS 74 Query: 60 LYE-VMLGHEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E L + F + ++ I ++++L + + Sbjct: 75 AGELAHLNDQHFSKPLIFGGPGKTTEDLQQSLHQKVACIHVESLTELKRLALVCANTGQT 134 Query: 118 IGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 + + +++ LG ES G FH+ Sbjct: 135 QAIMLRMNITLDGVASSKLQMGGQATPFGLDPCDLGTALALLQESPHLEFEGFHFHSMSH 194 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK----- 219 + + + + + + I++GGGI + + Sbjct: 195 QLCVENHLKLIARYFEITRQWESQWHIRCKVINVGGGIGVNYQCVDEQFNWAEFCTGLGE 254 Query: 220 --EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQ 276 + + QI E G + V+D+ ++ + H Sbjct: 255 LITQHDMQTRQIRFECGRYVSAFCGYYVMEVIDLKQSHGQWFAIGKGGTHHFRTPAAQGH 314 Query: 277 ESATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 G T V G+ C D + + + +GD + F Y N Sbjct: 315 NHPVWVHRNGQTAVVVNSTVNVVGQLCTPKDRLHQQLTVQELALGDYMVFTLAGAYAWNI 374 Query: 331 KN-WFNGINMPTIAVK 345 + F P I Sbjct: 375 SHQNFLMHAAPQIIYL 390 >gi|226290836|gb|ACO40487.1| ornithine decarboxylase [Grateloupia imbricata] Length = 420 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 58/367 (15%), Positives = 114/367 (31%), Gaps = 36/367 (9%) Query: 14 LLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFG 71 + + L + + V+ A+KC M L G +S E+ + Sbjct: 8 VRSALLSLQAFTEKMPRVRPFYAVKCNPDPVMLRVLANLGCGFDCASAKEMATVLDMGVE 67 Query: 72 GETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYS 129 E+ + K +N + F+ V +L K + + +R + + Sbjct: 68 AESIVFAHPCKRPLDLEFAIETNVTRMTFDCVDELEKVAAECPHAELVLRIRADDPSAVV 127 Query: 130 KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF--- 186 +F P + + NV G+ FH ++S + ++ + F Sbjct: 128 QFGHKYGADPQTEAPMLLA-AAKQLEMNVVGVSFHVGSGSQSCDAYPLAVEAARRVFDQA 186 Query: 187 GHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSV--------QIYLEPGE 235 +++ + LGGG P++D + + +++ ++ EPG Sbjct: 187 ADLGYEMQLLDLGGGFWGRFDATGHVPLEDVSEAINSALDRFFPVNSSGRKVEVIAEPGR 246 Query: 236 AIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDYL---------LYQESAT 280 TT+ V + + V S V D+ Sbjct: 247 YFAEACTTMYALVTTVKDRPDGSRSYYITDGVYGSFNNLVYDHGSVTAKVLRGPGMPPVQ 306 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM- 339 + V G +C D+ + ++ GD + F + Y I FNGI + Sbjct: 307 PVETETRLPSTVFGPTCDGVDLIFKDVPMPLLRRGDWLQFPNFGAYTIAGACAFNGIPVD 366 Query: 340 -PTIAVK 345 P I Sbjct: 367 NPDIMYV 373 >gi|326775090|ref|ZP_08234355.1| Diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1] gi|326655423|gb|EGE40269.1| Diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1] Length = 464 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 109/371 (29%), Gaps = 38/371 (10%) Query: 9 IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 ID + + ++ GV A K + + L G +S E+ L Sbjct: 43 IDTEGVRASVGALHDAFAATPGVLHTFAAKACSLVPVLRLLADCGMGCEVASPGELRLAL 102 Query: 68 E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGLRINP 124 E F + A EI L+ + +++ +L + A +GLR+NP Sbjct: 103 EAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLDELRRVDALRAPGTASVLGLRVNP 162 Query: 125 SVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFS 176 V S+ G +D + E + L H + + Sbjct: 163 QVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVGSQGCPLDLIA 222 Query: 177 AMLKNIEKEFGHFITQIEWI-----SLGGGIH---------FTDKDYPVKDFCQRLKEFS 222 A + + +GGG+ T +Y FS Sbjct: 223 AGVAQTYELAEEINATPGVRGVTSLDIGGGLPVNFADETVRPTYPEYVAALTAAAPGLFS 282 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYLLYQ 276 +Y + E G +++ + V + + ++ +PD + Sbjct: 283 GRY--SLVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLR 340 Query: 277 ---ESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 P GP A V G C AGD+ + GD + D Y + Sbjct: 341 IGVFGPDGTPKGGPPLAQDVAGPCCFAGDVVAYGRELPELAEGDLVVLYDTGAYYFSTPW 400 Query: 333 WFNGINMPTIA 343 +N + P + Sbjct: 401 AYNSLPRPAVY 411 >gi|118498282|ref|YP_899332.1| pyridoxal-dependent decarboxylase [Francisella tularensis subsp. novicida U112] gi|194323865|ref|ZP_03057640.1| Pyridoxal-dependent decarboxylase [Francisella tularensis subsp. novicida FTE] gi|118424188|gb|ABK90578.1| pyridoxal-dependent decarboxylase [Francisella novicida U112] gi|194321762|gb|EDX19245.1| Pyridoxal-dependent decarboxylase [Francisella tularensis subsp. novicida FTE] Length = 387 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 51/379 (13%), Positives = 106/379 (27%), Gaps = 33/379 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D L + + VKL ALK + ++ +S+ E+ Sbjct: 5 FFYYDLDMLEAHAKELHRL----PVKLWYALKANPLSRIIKVFDEQKISFDVASIGELDQ 60 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120 + + K + +++Q + +K + + L Sbjct: 61 VLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSNLVEKKNINVKVLL 120 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSF 172 R+ + + + + G D + S ++ G+ Sbjct: 121 RVQLVWNDQENNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIGMHCFQWGNILCL 180 Query: 173 LCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY--- 225 S + + K ++ I LGGGI L K Sbjct: 181 NKLSQIWEITTKALLDLSEAINVSLKVIDLGGGIGVPYNAGQKSISINDLIFCFNKLKEE 240 Query: 226 --SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATIY 282 ++ +LE G V + T ++D ++V H+ L + Sbjct: 241 FPDIEYWLELGRYAVAESGVYVTKIVDRKSVNNIDLLVTDGGAQHLVRPALTGESFPIQL 300 Query: 283 PNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337 + G C + D G K + + D + F+ Y F Sbjct: 301 LREEACGETNDFQIHGPLCTSLDKAGIASLPKDIGLNDYLIFKQTGAYGFTESMPLFLCH 360 Query: 338 NMPTIAVKNVDGTIKAIRE 356 N+P + G ++ +R+ Sbjct: 361 NLPAEVIFYK-GQLQTVRQ 378 >gi|242050040|ref|XP_002462764.1| hypothetical protein SORBIDRAFT_02g031560 [Sorghum bicolor] gi|241926141|gb|EER99285.1| hypothetical protein SORBIDRAFT_02g031560 [Sorghum bicolor] Length = 436 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 54/371 (14%), Positives = 104/371 (28%), Gaps = 41/371 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ +D K+L+ + V+ A+KC + L G +S EV Sbjct: 55 FHALDLNKVLDLIAAWRRAL--PDVRPYYAVKCNPEPAILGALAALGAGFDCASRAEVEA 112 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSN----------------------CDTIIFNTVS 102 + Y K + + T Sbjct: 113 VLRLGVQPSSIVYANPCKPEPHLEYAAEVGVNLATYDSEEEVGQGQALPPQVGVNLATYD 172 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGE--KCKDKIESEIKNVNG 160 + + K L ++ + + E + NV G Sbjct: 173 SEEEVSKVRRCHPKCELLLRLKGPDGAEAKYNLGTKYGAHADEVVPLLRAAQRAGINVVG 232 Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGI---HFTDKDYPVKD 213 + FH + ++ F + + + +GGG T + Sbjct: 233 VSFHVGSGVSRVDVYRGAIEAARAAFDEAVALGMPPMRVLDIGGGFTAGATTFGEAAAVV 292 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAH 268 L F + SV++ EPG TL V+ + S+ Sbjct: 293 NDALLHYFGDLPSVEVIGEPGRYFAETAFTLAARVIGKRTRGEVREYWIDDGLYGSLNCI 352 Query: 269 VPDYLLYQESA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + D + + P +T+ V G +C + D + V +GD + F+++ Y Sbjct: 353 LMDQYDPRPRPLGSPRPGEKTHTSTVFGPTCDSQDRMVTDYQLPEVSVGDWLIFDNMGAY 412 Query: 327 NINRKNWFNGI 337 + + FNG Sbjct: 413 STAAGSKFNGF 423 >gi|325914562|ref|ZP_08176905.1| diaminopimelate decarboxylase [Xanthomonas vesicatoria ATCC 35937] gi|325539213|gb|EGD10866.1| diaminopimelate decarboxylase [Xanthomonas vesicatoria ATCC 35937] Length = 398 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 106/370 (28%), Gaps = 32/370 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 YL D L + + + A +L A K A + TL ++DG +S E+ Sbjct: 27 AYLYDLTALDAH-AAWMRAQLPAQCELFYAAKANAEPQILHTLAPHVDGFEGASGGELAW 85 Query: 66 GHEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 H + + D E+ + D + ++ +L + A + + + + + Sbjct: 86 LHAQQPQAALLFGGPGKLDSELAQAAALPDCTVHVESIRELQRLAAIAARAGRCVPVFLR 145 Query: 124 PS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFL 173 + L +P G +D + + G FH + Sbjct: 146 MNIAVPGAQGTRLMMGGQPSP-FGLDPQDLDAAMHLLRVSPSLRLEGFHFHLMSHQREAG 204 Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225 ++ + + ++ GGG + FC L ++ Sbjct: 205 AQLHLVAAYLRTVQQWRQTYALGPLRVNAGGGFGVDYLAPDSSFDWAGFCAGLPALLHEH 264 Query: 226 SV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++ LEPG + + VLD+ + + H Sbjct: 265 GSTLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRV 324 Query: 284 NTGPY-------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335 G + + G+ C D+ + GD ++F Y N + F Sbjct: 325 LRGTHAPVISDTPVTLVGQLCTPKDVLARNQPVAALAPGDCLAFPLAGAYAWNISHQQFL 384 Query: 336 GINMPTIAVK 345 P Sbjct: 385 MHPPPQKVFL 394 >gi|119627876|gb|EAX07471.1| arginine decarboxylase, isoform CRA_c [Homo sapiens] Length = 528 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 118/362 (32%), Gaps = 37/362 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L Q G + ++ E+ L Sbjct: 109 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 166 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H K + + + +++ K K+ L I Sbjct: 167 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 226 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 227 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 286 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG T+ + + F E V I+ E G Sbjct: 287 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 346 Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272 VT+ T+ +++ + I +S + ++ Sbjct: 347 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPT 406 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + Q+ + Y++ + G + D E + + +GD + F+++ Y + + Sbjct: 407 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 464 Query: 333 WF 334 F Sbjct: 465 PF 466 >gi|9631775|ref|NP_048554.1| hypothetical protein PBCV1_A207R [Paramecium bursaria Chlorella virus 1] gi|145579908|pdb|2NVA|A Chain A, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579909|pdb|2NVA|B Chain B, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579910|pdb|2NVA|C Chain C, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579911|pdb|2NVA|D Chain D, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579912|pdb|2NVA|E Chain E, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579913|pdb|2NVA|F Chain F, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579914|pdb|2NVA|G Chain G, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579915|pdb|2NVA|H Chain H, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|1181370|gb|AAC96575.1| PBCV-1 arginine decarboxylase [Paramecium bursaria Chlorella virus 1] Length = 372 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 111/359 (30%), Gaps = 40/359 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ + + + +D + V A+KC + T+ +S E+ Sbjct: 19 FYVSSPKIVEDLIDQWTILFPR--VTPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKK 76 Query: 66 GHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + K D I A D F++ +L+K + K+ LRI Sbjct: 77 VIQIGVSPSRIIFAHTMKTIDDLIFAKDQGVDIATFDSSFELDKIHT--YHPNCKMILRI 134 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + L + + + V G+ FH +++ + +K+ Sbjct: 135 RCDDPNATVQLGNKFGANEDEIRHLLEYAKQLDIEVIGISFHVGSGSRNPEAYYRAIKSS 194 Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEKYSVQIYLEPG 234 ++ F + + +GGG+H + Y +K+F + +V I EPG Sbjct: 195 KEAFNEAISVGHKPYILDIGGGLHADIDEGELSTYMSDYINDAIKDFFPEDTVTIVAEPG 254 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA----------------HVPDYLLYQES 278 + + L T V+ + + D +E Sbjct: 255 RFFAEHYSVLATQVIGKRVRDGLYEYFFNESTYGGFSNVIFEKSVPTPQLLRDVPDDEEY 314 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 +++ G +C D+ + IGD + F Y FNG Sbjct: 315 ---------VPSVLYGCTCDGVDVINHNVALPELHIGDWVYFPSWGAYTNVLTTSFNGF 364 >gi|83944313|ref|ZP_00956768.1| decarboxylase, pyridoxal-dependent [Sulfitobacter sp. EE-36] gi|83953354|ref|ZP_00962076.1| decarboxylase, pyridoxal-dependent [Sulfitobacter sp. NAS-14.1] gi|83842322|gb|EAP81490.1| decarboxylase, pyridoxal-dependent [Sulfitobacter sp. NAS-14.1] gi|83844857|gb|EAP82739.1| decarboxylase, pyridoxal-dependent [Sulfitobacter sp. EE-36] Length = 392 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 115/354 (32%), Gaps = 22/354 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ + ++ D ++ A+K A + L + G ++S E+ Sbjct: 34 PTLVVSRARVGVQYDALQAGLG--DARIHYAVKANPAPEIIRMLVERGSGFDAASRQEIE 91 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L + ++ K A + +F + K ++ +R+ Sbjct: 92 LCLSQGADPAKISFGNTIKRGVDIAFAHSIGVTMFAADCEAELDKIAEHAPGARVYIRLI 151 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI- 182 S + + L L + +S GL FH + + + +L + Sbjct: 152 VENSMADWPLTRKFGCAGSLLPSLLEYTKSVGLVPYGLSFHVGSQTRRAEYWHPVLDQVA 211 Query: 183 --EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYSVQIYL--EPGE 235 ++ +++GGG D P + E++ L EPG Sbjct: 212 PLWHAAKEAGHDLQLLNIGGGFPAYHGDPVDAPRGYAAAVVAAVKERFGEIPVLMAEPGR 271 Query: 236 AIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPDY--LLYQESATIYPNTGPY- 288 +V + VL +S + V +D + + + + + P Sbjct: 272 GMVAEAGHIAAEVLLVSRKSAEAARRWVYLDIGRFSGLAETEGEAIRYQFVTPHDGKPVG 331 Query: 289 TAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 ++ G SC + D+ E + ++ GD++ ++ Y + + FNG Sbjct: 332 PCVLAGPSCDSADVLYEKNPVDLPLDLRDGDKVMIKNCGAYTSSYSSVGFNGFP 385 >gi|134301242|ref|YP_001121210.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis WY96-3418] gi|134049019|gb|ABO46090.1| pyridoxal-depedent decarboxylase [Francisella tularensis subsp. tularensis WY96-3418] Length = 417 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 123/389 (31%), Gaps = 35/389 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P ++ID+ LL + ++K + + + S Sbjct: 28 SPCFIIDENTLLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 E + D L I + ++ + A+KL+ K Sbjct: 88 EFEQIQKLQLCDKSIIFNGPYKNDASFIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173 IGLR+ + + + + + + GL H + Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207 Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218 + + E + +EWI LGGG+ + ++ + + Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267 Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271 ++Y + E G ++V + L TT V +N ++ + +P Sbjct: 268 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327 Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 Y+ + ++ G SC+ D + F ++ GD++ + V YNI+R Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR-EFS 358 N F P++ + + + + +R + Sbjct: 388 NNEFI-HLKPSVILIDKNHQYQVLRVRQT 415 >gi|238916082|ref|YP_002929599.1| diaminopimelate decarboxylase [Eubacterium eligens ATCC 27750] gi|238871442|gb|ACR71152.1| diaminopimelate decarboxylase [Eubacterium eligens ATCC 27750] Length = 412 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 59/393 (15%), Positives = 118/393 (30%), Gaps = 49/393 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D +L +D I GV + A+K + L++ +D S E Sbjct: 15 GTPSYIFDTDELCARIDAMQQIL-GCGVTVCYAMKANPF--LISVLDKKLDKFEVCSPGE 71 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD---TIIFNTVSQLNKFKDKAQKLHKKI 118 + E E + K+ + +++QL A + K+ Sbjct: 72 FAICEKEGINREKIVLSGVNKEKKDILYTMKTGAVGIYTVESLNQLELINSCAVECGIKV 131 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLC 174 + I ++ E K E + + G+ ++ + ++ Sbjct: 132 KVLIRV------TSGNQFGINERQVYEIADRKDELKGIILEGIQCYSGTQKKKLSQIEAE 185 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY--------- 225 + +++ I G G+ D + +++ Sbjct: 186 VVWLQAIAHTCEAEHGVELKEIEYGPGLSVDYFVTDKCDAMNTDFDELKEFAVMIKEMSE 245 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------- 270 + LE G I L + + D+ N + S H+ Sbjct: 246 KFNVTLEMGRYIAATCGILISRIADMKMNDTTRYAIIDSGINHINYYGQAMAMKKPRCEF 305 Query: 271 -DYLL------YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + + G +CG C GD+ + K KIGD I+F ++ Sbjct: 306 IPMEYTEGFADGVDHEVEVYSQGVQPYNICGSLCTVGDVIVKNLELKDAKIGDMIAFYNI 365 Query: 324 AGYNINRK-NWFNGINMPTIAVKNVDGTIKAIR 355 Y++ F MP I + ++ + +R Sbjct: 366 GAYSVTEGIYLFLSRRMPAIVMYSMKNGYRIVR 398 >gi|212632996|ref|YP_002309521.1| Vibrioferrin biosynthesis protein PvsE [Shewanella piezotolerans WP3] gi|212554480|gb|ACJ26934.1| Vibrioferrin biosynthesis protein PvsE [Shewanella piezotolerans WP3] Length = 412 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 50/391 (12%), Positives = 108/391 (27%), Gaps = 50/391 (12%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D ++L N+ + + +L A K + L +DG ++S E+ Sbjct: 23 AYIYDLEQLKNHASAMMAALP-SNCQLYYAAKANPEAEVLQVLAPIVDGVEAASGGELNW 81 Query: 66 GHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 H+ + K A+ + D I ++++L + ++ + + + Sbjct: 82 IHQCQPQVPLIFGGPGKLVSELSQAIDLDVDAIHVESLTELQRITALCRQKQRHCRILLR 141 Query: 124 PSVSYSKF--ILADPNRPFSRLGEKCKDKIESEIK-------------NVNGLMFHNNCE 168 ++S + G + + + G FH Sbjct: 142 MNISLEGIAETRLTMGGKPTPFGIDAAELDTAMAIVRDIPTLAGKPLVELLGFHFHLMSH 201 Query: 169 N----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220 + +K + + +++GGGI D + K FC L+ Sbjct: 202 QLDVGRHLALMKLYFSTYKKWCQKYSLNLPMLNVGGGIGVNYSDPQQIFDWKHFCMELET 261 Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQ 276 ++ ++ E G + VLDI +N + H Sbjct: 262 LIKQNQMEAVNIRFECGRFVTAAMGYYVMQVLDIKKNHGQWFAIGHGGTHHFRTPAAQAH 321 Query: 277 ESATIYPNTGP-------------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 + + G+ C D+ + + + + D Sbjct: 322 DHPFFVLAAKDIGIELEQAETKITTTNLKSELVTIVGQLCTPKDVLATQQYVERLAVDDY 381 Query: 318 ISFEDVAGYNINRKN-WFNGINMPTIAVKNV 347 + F Y N + F P Sbjct: 382 LVFSHAGAYAWNISHQNFLMHAPPQRFFIRE 412 >gi|23004296|ref|ZP_00047701.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 276 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 74/266 (27%), Gaps = 21/266 (7%) Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENKSF 172 +R+NP V + ++ G E + G+ H + Sbjct: 2 IRVNPDVDALTHAKISTGKSENKFGIPIARAREVYAGAARLPGLEIVGVDAHIGSQITDL 61 Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEFSEK 224 F + + ++ + GGG+ L+ Sbjct: 62 TPFDNAARLLCALARDLLADGHRLHHVDFGGGLGIPYRDDNAPPPDPAALAAILRPHFRP 121 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283 ++ E G I N L T V+ + K VIVD ++ + L A Sbjct: 122 LGLKPVFEIGRMIAGNAGILVTRVVYVKPTEGKTFVIVDGAMNDLIRPTLYEAFHALRPL 181 Query: 284 NTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + TA V G C +GD V GD I+ Y + +N Sbjct: 182 SEPGPDTPRLTADVVGPVCESGDYLALGREMPEVSPGDLIAVMSAGAYGAVQAGTYNSRR 241 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + D SY+D Sbjct: 242 LVPEVLVRGDQASVVRPRPSYDDLIR 267 >gi|149243762|ref|XP_001526522.1| ornithine decarboxylase [Lodderomyces elongisporus NRRL YB-4239] gi|146448916|gb|EDK43172.1| ornithine decarboxylase [Lodderomyces elongisporus NRRL YB-4239] Length = 436 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 53/367 (14%), Positives = 113/367 (30%), Gaps = 30/367 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ ++ ++ V+ A+KC + + L +S E+ Sbjct: 68 FFVCDLNQVYKSVQLWK--QQLPRVQAHYAVKCNTNMKVVEFLADKGVNFDCASKNEIDA 125 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + E Y K + + + V++L K + + + Sbjct: 126 VLQLGVAAERIVYANPCKTNSFIRHARDNQVNLTTVDNVNELVKLSKFHPECGILVRIIT 185 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S + + + E + V G+ FH K F +++ Sbjct: 186 DDESSQCRLSTKFGCSVETAVKEILPTAKNLGLP-VVGVAFHVGSGAKDFQAIYQAIRDS 244 Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLEPG 234 F +++ + +GGG F K + +F ++ + EPG Sbjct: 245 RIVFDYGIDLGFKMKILDIGGGFEFDTFVESSKMVNVSIDKFFPDLFVKENGISFIAEPG 304 Query: 235 EAIVTNTTTLNTTVLDISE-------NIKNLVIVDSSVEAHVPDYLLYQES--------A 279 +V N TL T V+ + + V ++ + D+ Sbjct: 305 RFMVANAFTLATHVIAKRDINGSAKAMLYINDGVYGNLNCILFDHQEPTARILKSGGQFH 364 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGIN 338 + + + G +C D V +GD + F ++ Y K FNG Sbjct: 365 YGEKDQRRFEYSIWGPTCDGLDCVSASSHLNCNVAVGDWLYFPNLGAYTSCAKTQFNGFK 424 Query: 339 MPTIAVK 345 T + Sbjct: 425 NDTEVIY 431 >gi|254993002|ref|ZP_05275192.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J2-064] Length = 282 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 37/281 (13%), Positives = 82/281 (29%), Gaps = 32/281 (11%) Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHNNCE 168 +R+ P + + S+ G + S ++ GL H + Sbjct: 1 LIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQ 60 Query: 169 NKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKEFSE 223 F + I + + + ++LGGG + + +++ + Sbjct: 61 IFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMD 120 Query: 224 K----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + +I++EPG ++V T V E + + ++ Sbjct: 121 EVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRP 180 Query: 272 YLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + T + G+ C +GD+ G+ ++ Y Sbjct: 181 ALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGAYG 240 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 + +N I P + + +Y + N LS Sbjct: 241 YAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 281 >gi|21232485|ref|NP_638402.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767431|ref|YP_242193.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris str. 8004] gi|188990536|ref|YP_001902546.1| Putative diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris str. B100] gi|21114272|gb|AAM42326.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572763|gb|AAY48173.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris str. 8004] gi|167732296|emb|CAP50488.1| Putative diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris] Length = 427 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 106/358 (29%), Gaps = 33/358 (9%) Query: 21 ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79 + + G L A K A + TL Y+DG ++S E+ H++ + Sbjct: 41 WMRAQLPPGCTLFYAAKANAEPQILQTLAPYVDGFEAASGGELAWLHQQQPDAALLFGGP 100 Query: 80 AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG------LRINPSVSYSKFI 132 + E+ + D + ++ +L + A+++ + LR+N +V ++ Sbjct: 101 GKLESELAQAVRLPDCTVHVESLGELQRLAAIARQIAQPDRRRIPVFLRMNIAVPGAQTT 160 Query: 133 LADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLKNI--- 182 S G D + ++ + G FH + ++ Sbjct: 161 RLMMGGQPSPFGLDPDDLDAALLQLRASPALELRGFHFHLMSHQRDAAAQLHLIAAYLRT 220 Query: 183 -EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGE 235 + ++ GGG + FC L + Q+ LEPG Sbjct: 221 VQHWRQRHGLGPLLVNAGGGFGVDYLTPEASFDWAGFCAGLPAVLHAHGDGLQLRLEPGR 280 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG------PY 288 + + VLDI + + H + + Sbjct: 281 YVSASCGWYLMEVLDIKRSHGAWFAIARGGTHHFRTPAAQGHDHPCVVVRGTHAPVLRDT 340 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345 + G+ C D+ + GD ++F Y N + F P + Sbjct: 341 PVTLVGQLCTPKDVLARNQRVAALAPGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFL 398 >gi|308446000|ref|XP_003087071.1| hypothetical protein CRE_26049 [Caenorhabditis remanei] gi|308263085|gb|EFP07038.1| hypothetical protein CRE_26049 [Caenorhabditis remanei] Length = 318 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 104/313 (33%), Gaps = 23/313 (7%) Query: 21 ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAYNV 79 ++ A+K + + + L + G + E+ ++ Sbjct: 1 MDQAFSFIDHQICFAVKSNSNLAVLNVLAKLGSGFDIVTGGELARVLAAGGDATKIVFSG 60 Query: 80 -AYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILAD 135 ++ + A+ + ++L++ + A L I LR+NP V Sbjct: 61 LGKQEADIQKALEVGIACFNVESHAELDRIQKVAAGLGKKAPISLRVNPDVDAKTHPYIS 120 Query: 136 PNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLKNIEKEFG- 187 ++ G E+ +V G+ H + F L + Sbjct: 121 TGLKENKFGIPSDSVFETYQYAASLPNLDVIGIDCHIGSQLTETQPFVDALDRVIMMIAK 180 Query: 188 --HFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 Q++ I +GGG+ T KD ++ ++ EK +++Y+EPG +I N Sbjct: 181 LKELGIQLKHIDIGGGLGVTYKDETPPSVAEYANAMRPALEKLGLKVYMEPGRSISANAG 240 Query: 243 TLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSC 297 L T V L N +N I+D+++ + L + T + G C Sbjct: 241 VLVTKVDLLKPTNYRNFAIIDAAMNDLIRPSLYQAWMDIQAVVSRTDVEAKTWDIVGAIC 300 Query: 298 LAGDIFGEFHFEK 310 GD G+ Sbjct: 301 ETGDFLGKERELA 313 >gi|271969560|ref|YP_003343756.1| Orn/DAP/Arg decarboxylase 2 [Streptosporangium roseum DSM 43021] gi|270512735|gb|ACZ91013.1| Orn/DAP/Arg decarboxylase 2 [Streptosporangium roseum DSM 43021] Length = 392 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 98/346 (28%), Gaps = 20/346 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D L + G++L A+K + L +++DG SS E+ Sbjct: 52 PAYVYDLASLDEHAAAVRAAL--PGIELYYAVKANPDPELLRVLARHVDGFEVSSGGELA 109 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 F G A K + + +L + A + LR+N Sbjct: 110 HVRGLFPGARVALGGPGKTDAELFGDVTRLHV--ESPGELRRL--LASGRRADVLLRVNL 165 Query: 125 SVS------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 V + E + + G+ H ++ Sbjct: 166 DVPVAGASLAMGGGATPFGMDPGGIAECVALLSGQDAVRLRGIHAHLASGLEAPALLELA 225 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGE 235 +E + I+LGGG+ + + E + + +EPG Sbjct: 226 AAVLEYARE---LGVTEINLGGGMAVSYAAPDARFDWHSYGEGLARLRRPGEVLRIEPGR 282 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295 A+ T V+D+ L V + H+ S + + G+ Sbjct: 283 ALTVYCGRYVTRVIDVKRVHGELFAVVAGGTHHLRTPATKGHSQPLAALPPGEPVTIVGQ 342 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMP 340 C D+ + GD + F Y N + F P Sbjct: 343 LCTPKDVLAHRV-PVRLAAGDIVEFTMAGAYAWNISHHDFLMHPKP 387 >gi|116317805|emb|CAH65842.1| OSIGBa0147B06.1 [Oryza sativa Indica Group] Length = 410 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 91/354 (25%), Gaps = 20/354 (5%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++++D K+++ GV+ A+KC + L G +S E+ Sbjct: 52 FHVLDLAKVVDLYAGWRRAL--PGVRPFYAVKCNPDTALLGALAALGAGFDCASRAEIEA 109 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN- 123 Y K A + + T + + L Sbjct: 110 VLALGVPPAAIVYANPCKPGAHVAFAAEAG-VNVTTYDSEEEVAKVKRCHPSCELLLRIK 168 Query: 124 -PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 P K L V G+ FH + ++ Sbjct: 169 APDCGGVKVDLGLKYGANPDEVLPLLRAARRAGLGVAGVSFHVGSGASRAAVYRGAIEAA 228 Query: 183 EKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQ-RLKEFSEKYSV--QIYLEPGE 235 F + + + +GGG L + ++ EPG Sbjct: 229 RAAFDAAAGLGMPPMRVLDIGGGFVAGAAFGDAAAVINRALGRYFGDLLPTVEVIGEPGR 288 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290 TL V+ S+ + D + + G T Sbjct: 289 YFAETAFTLAARVIGKRRRGDVREYWIDDGVYGSLNCILLDSYVPRPRPLAGARPGEETH 348 Query: 291 --MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 V G +C + D + + + D + F+D+ Y + FNG I Sbjct: 349 ASTVFGPTCDSIDTVVTGYQLPEMSVDDWLVFDDMGAYTTAAGSSFNGFATSAI 402 >gi|313637136|gb|EFS02677.1| diaminopimelate decarboxylase [Listeria seeligeri FSL S4-171] Length = 293 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 82/281 (29%), Gaps = 32/281 (11%) Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHNNCE 168 +R+ P + + S+ G + S ++ GL H + Sbjct: 12 LIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEAAIKQVLHASAAFDLIGLHCHIGSQ 71 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKEFSE 223 F ++ + + + ++LGGG + + +++ E Sbjct: 72 IFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIME 131 Query: 224 KYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271 + +I++EPG ++V T V E V + ++ Sbjct: 132 EVRDVANANDIAIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYVAVDGGMSDNIRP 191 Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 L + T + G+ C +GD+ G+ ++ Y Sbjct: 192 ALYDAHYDAVLAANPEKVPEETVAIAGKCCESGDMLIWDLPLPKSNAGEILAVFCTGAYG 251 Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 + +N I P + + +Y + N LS Sbjct: 252 YAMASNYNRIPRPPVVFVEDGVDKLVVARETYENLVQNDLS 292 >gi|303275556|ref|XP_003057072.1| adenosylmethionine/pyridoxal dependant decarboxylase fusion protein [Micromonas pusilla CCMP1545] gi|226461424|gb|EEH58717.1| adenosylmethionine/pyridoxal dependant decarboxylase fusion protein [Micromonas pusilla CCMP1545] Length = 1019 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 107/397 (26%), Gaps = 69/397 (17%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + ++D + V+ A+KC + TL +S EV Sbjct: 604 FLVVDLGVVTRRWHYWRATLPR--VQPHYAVKCNMDTRVLATLAALGSSFDCASPTEVDA 661 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y K A ++ F++V +L K A ++ + LR Sbjct: 662 VISLGVSPDRIIYANPCKLPRHLAAVAGSGVSLTTFDSVGELEKISALAPEMKVLLRLR- 720 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + NVNG+ FH + L F L+ Sbjct: 721 ADDPDARCVLGNKY-GAEPAEVKVLLEAAKRLGVNVNGVSFHVGSGATNPLAFREALEFA 779 Query: 183 EKEFGH----FITQIEWISLGGGIHFTDKDYPVKD-------------FCQRLKEFSEKY 225 F + +E + +GGG + K + + F E Sbjct: 780 RVAFDAAKELGLPPMEVLDIGGGFSGSIKADDASNDDDVTLAAVAGEVNKSLERLFPEAE 839 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDIS--------------------------ENIKNLV 259 V++ EPG TL + + Sbjct: 840 GVRVISEPGRYFAEACVTLACMIFSRRIRSTEDGSLAPGEDSHQYFVSDGLYGMMNSIMY 899 Query: 260 IVDSSVEAHVP-----------------DYLLYQESATIYPNTGPYTAM--VCGRSCLAG 300 + +P +Y + N+ T V G +C Sbjct: 900 DHATVNSRLLPVATNAAALAAGNVDAVIPANVYAGDDAVVGNSRAKTYPSTVFGPTCDGL 959 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 D E + +GD + F + Y ++ + FNG Sbjct: 960 DKIHEQTAMPELTVGDWLVFPHMGAYTVSAGSNFNGF 996 >gi|322789437|gb|EFZ14734.1| hypothetical protein SINV_02675 [Solenopsis invicta] Length = 402 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 121/370 (32%), Gaps = 23/370 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + K V A+K + L +S E+ Sbjct: 35 FYIADIGNVIKKHQEWIT--KLPRVIPHFAIKANPDPTVIKVLAALNSCFDCASKQEIKQ 92 Query: 66 GHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + Y A N + ++ S+L K KD + I +R Sbjct: 93 VMQHGVHGDRIIFAHPTKYPSHIEYAKEVNVKQMTVDSESELFKIKDIFPEAKIIIRIRC 152 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF----SAM 178 + +K + + + + N+ G FH C K + + + Sbjct: 153 DAKYIGAKSLGLKFGTQSNEETVRLIQLTKDLGLNLYGFSFHVGCLCKEYEAYSRGIAMC 212 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--VQIYLEPGEA 236 + I +++ I +GGG + + + + + +++ EPG Sbjct: 213 KELIIASKAIGFDKVQLIDIGGGFEGK-SGMNIDEVANVINDAIQDLDSSIRVISEPGTY 271 Query: 237 IVTNTTTLNTTVLDISE------NIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTG 286 V+++ TL T + ++ + + + + L Q + Sbjct: 272 YVSSSFTLATYLHSKRIIPNKGEMMRMYYMNCGVFHSFIDELLGIQARLPQSLSEPISKE 331 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA-VK 345 + + + G + + D+ + IGD + + ++ Y+I FNG +P + Sbjct: 332 KFLSSIWGPTADSYDLIVKDAMLPEFYIGDWLIWTNMGAYSIAIACPFNGFPIPVVIPFI 391 Query: 346 NVDGTIKAIR 355 + ++ Sbjct: 392 RKSQLLVLVK 401 >gi|89257094|ref|YP_514456.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica LVS] gi|115315451|ref|YP_764174.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica OSU18] gi|156503308|ref|YP_001429373.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009486|ref|ZP_02274417.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FSC200] gi|254368329|ref|ZP_04984347.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica 257] gi|254368961|ref|ZP_04984974.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FSC022] gi|290952985|ref|ZP_06557606.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica URFT1] gi|295313805|ref|ZP_06804378.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica URFT1] gi|89144925|emb|CAJ80273.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica LVS] gi|115130350|gb|ABI83537.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica OSU18] gi|134254137|gb|EBA53231.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica 257] gi|156253911|gb|ABU62417.1| pyridoxal-depedent decarboxylase [Francisella tularensis subsp. holarctica FTNF002-00] gi|157121882|gb|EDO66052.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FSC022] Length = 417 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 124/389 (31%), Gaps = 35/389 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P ++ID+ LL + ++K + + + S Sbjct: 28 SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 E + D + L I + ++ + A+KL+ K Sbjct: 88 EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173 IGLR+ + + + + + + GL H + Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207 Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218 + + E + +EWI LGGG+ + ++ + + Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267 Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271 ++Y + E G ++V + L TT V +N ++ + +P Sbjct: 268 IVPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327 Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 Y+ + ++ G SC+ D + F ++ GD++ + V YNI+R Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR-EFS 358 N F P++ + + + + +R + Sbjct: 388 NNEFI-HLKPSVILIDKNHQYQVLRVRQT 415 >gi|307323622|ref|ZP_07602832.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] gi|306891111|gb|EFN22087.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] Length = 464 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 61/396 (15%), Positives = 117/396 (29%), Gaps = 42/396 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-VMLGH 67 +D + ++ +A V A K + + L + G +S E Sbjct: 40 VDADGVQESVRDLHRAFGDAPVLHTFAAKAASLVPVLRLLARSGMGCEVASPGELAQAVA 99 Query: 68 EKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINP 124 F E + A E+ L+ + + +++++ D + +GLRINP Sbjct: 100 AGFPPERIVLDSPAKTPAELAHALALGVAVNADNFAEVDRIGDLLAVHESSSVLGLRINP 159 Query: 125 SVSYSKFILADPNRPFSRLGEKCKD--KIES------EIKNVNGLMFHNNCENKSFL--- 173 V P S+ G +D + E + L H + S Sbjct: 160 QVGAGAIDAMSTASPSSKFGVPLRDPGARQRVLDTFTERPWLTRLHVHVGSQGCSLDLIG 219 Query: 174 -CFSAMLKNIEKEFGHFITQ-IEWISLGGGIH---------FTDKDYPVKDFCQRLKEFS 222 A + E+ Q + + +GGG+ T + Y + + Sbjct: 220 EGVRATFELAEEINAAAGRQQVTSLDIGGGLPVNFDDDEIRPTYETYVRQLRAAVPGLLT 279 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA------HVPDYLLYQ 276 +Y + E G ++V V + + + + +PD + Sbjct: 280 GRY--DLVTEFGRSLVAKNGFTAAVVEYTKDTGGRRIALTHAGAHIATRTVFMPDAWPLR 337 Query: 277 ESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + + V G C AGD+ + GD + D GY + Sbjct: 338 IAVYDRDGRPKHAPERVQDVAGPCCFAGDLVARERTLPELAPGDIVVLLDTGGYYFSTPW 397 Query: 333 WFNGINMPTIAVKNVDGTIK----AIREFSYNDYYN 364 +N + P + G RE + + Sbjct: 398 SYNSLARPAVHGFTTHGPDLRFATVRREQTLAEILA 433 >gi|146413553|ref|XP_001482747.1| hypothetical protein PGUG_04702 [Meyerozyma guilliermondii ATCC 6260] Length = 432 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 50/377 (13%), Positives = 107/377 (28%), Gaps = 35/377 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ N ++ V+ A+KC + + L + +S E+ Sbjct: 59 FFVADIGAVVRNYRLWQ--QELPQVQPHYAVKCNTDMRVIEALARMGCNFDCASKTEIDQ 116 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 Y K + + V +L K K + I + Sbjct: 117 VLLLGVDPGRIVYANPCKTNSYVRHAKDVGVNLTTVDNVHELQKIKRFHPECGILIRIMT 176 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + + E + V G+ FH +++ Sbjct: 177 DDESAQCRLSTKFGCSVKTAVEELFP-LAKELNLRVRGVAFHVGLGATDLDSIYKAVQDS 235 Query: 183 EKEFGHFITQIEWISLG-GGIHFTDKDYPVKDFCQRLKEFSEK---------YSVQIYLE 232 F I Q + + I ++ + ++ +K + V+ E Sbjct: 236 RILFDCGIDQFGFKEMNLLDIGGGFQELTFGESSAMVRMSLDKFFSSAYRELHPVEFIAE 295 Query: 233 PGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYL--------L 274 PG +V N TL V+ + + V ++ + D+ Sbjct: 296 PGRFMVANAFTLAVHVIARRDVREAESEVQAMLYVNDGVYGNLNCILFDHQVPLASLLTH 355 Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + + + G +C D G+ V++GD + F ++ Y Sbjct: 356 KGQFVYGSEPDPELSFSIWGPTCDGLDCISGKCQLAFNVEVGDWLYFPNLGAYTSAATTS 415 Query: 334 FNGINMPTIAVKNVDGT 350 FNG V Sbjct: 416 FNGFKGTAEVVYVNSEK 432 >gi|218781864|ref|YP_002433182.1| diaminopimelate decarboxylase [Desulfatibacillum alkenivorans AK-01] gi|218763248|gb|ACL05714.1| Diaminopimelate decarboxylase [Desulfatibacillum alkenivorans AK-01] Length = 402 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 111/365 (30%), Gaps = 22/365 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60 TP + ++ NL+ ++ A+K + + + G S Sbjct: 37 GTPAFFYSANRISQNLERLQEALSQLDSYQIYYAIKANRFAPILTHIKKTGLCGVDICSP 96 Query: 61 YEVMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKK 117 E++ F +Y A + E+ + N D + +++S + + Sbjct: 97 NELLHAFSCGFTCSEISYTAHAMTNDELRLLADNPDVRLNCDSLSTIRRLGQFCSHRKIG 156 Query: 118 IGLRINPSVSYSKFILADPNR-PFSRLGEKCKDKIESEIKN------VNGLMFHNNCENK 170 I + + Y + ++ G + E+ V+ + FH C Sbjct: 157 IRVNPAMGIGYRDSETLRYSGDKTTKFGVYREQFEEALALASKHGLIVDTIHFHTGCGYL 216 Query: 171 SFLCFSAMLKNIE-KEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFSEKY 225 + F + + ++LGGG+ + V + + + Sbjct: 217 NNQLSIFDEILEATHWFTDKVKDLASVNLGGGLGVPHDEDDVNLDLDSWVSVINKHYGGK 276 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLYQESATIYPN 284 + + +EPG+ +V ++ L V + + I + + + Sbjct: 277 GLTVCVEPGDYVVKDSGILILEVNTVERKQQTDFIGVNGGFNLAIEPAFYGLPCEPVVLE 336 Query: 285 TGP---YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G + D++ + +K GD ++F + GY + + Sbjct: 337 QKTDTLKPVTIAGNINESLDVWKDNFPMPDQIKEGDLLAFINAGGYASSMMSNHCMRGQV 396 Query: 341 TIAVK 345 + + Sbjct: 397 SENIV 401 >gi|16124615|ref|NP_419179.1| ornithine decarboxylase [Caulobacter crescentus CB15] gi|221233304|ref|YP_002515740.1| ornithine decarboxylase [Caulobacter crescentus NA1000] gi|13421513|gb|AAK22347.1| ornithine decarboxylase, putative [Caulobacter crescentus CB15] gi|220962476|gb|ACL93832.1| ornithine decarboxylase [Caulobacter crescentus NA1000] Length = 419 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 50/371 (13%), Positives = 103/371 (27%), Gaps = 32/371 (8%) Query: 20 TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYN 78 A + + + A+K + + L + +SL EV L + G A+ Sbjct: 31 AARWFQSEFKGDVFYAVKANPSPWVIRELAKAGVRSFDVASLNEVELVANEAPGSRMAFM 90 Query: 79 VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADP 136 K + + + + A K + L + V + Sbjct: 91 HPVKSRAAISAAYFDHGVKTFSFDTHEELAKILDATGQAKDLNLIVRMGVQAEGAAYSLS 150 Query: 137 NRPFSRL--GEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194 + + +++ G+ FH + F A + + + Sbjct: 151 GKFGVEMHNAPDLLLAARRATQDLMGVSFHVGSQCMRPTAFQAAMAQASRALVRAGVLAD 210 Query: 195 WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 + +GGG D + L ++ + E E L + Sbjct: 211 VVDVGGGFPSIYPGMVPPDLSEYLAAIDRGFAEMMVHETTELWCEPGRALVAEASSLLVK 270 Query: 255 IKNLVIVDSSVEA----------HV---PDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 ++ + H+ LY++S + G G +C + D Sbjct: 271 VELKKGDALYLNDGSYGSLFDAAHMKWPFPVKLYRKSGEVVE-EGLKPFRFYGPTCDSVD 329 Query: 302 IF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI-----------NMPTIAVKNVDG 349 G F+ + V GD I + Y + FNG M ++ Sbjct: 330 HMPGPFYLPESVDEGDYIEIGMLGAYGVAMNTRFNGFGETDTAQVQDAPMASMYGL-AKR 388 Query: 350 TIKAIREFSYN 360 +I +R+ + Sbjct: 389 SIPVVRQETEE 399 >gi|330800165|ref|XP_003288109.1| hypothetical protein DICPUDRAFT_152297 [Dictyostelium purpureum] gi|325081870|gb|EGC35371.1| hypothetical protein DICPUDRAFT_152297 [Dictyostelium purpureum] Length = 429 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 52/393 (13%), Positives = 114/393 (29%), Gaps = 41/393 (10%) Query: 7 YL--IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 Y+ + + A K A+KC + + G +S E+ Sbjct: 34 YVMMYNLDEFRALAKEACDNLKGLQTM---AVKCNPVMNLMKEAIKCGLGAEVASFGELK 90 Query: 65 LG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI---- 118 + F ++ K N I + +L ++ ++ Sbjct: 91 IAERAGFEPSKIIFDSPIKTRRELEYALNIGCVINVDNFEELETIEEIVSTFTQEKKDSL 150 Query: 119 --GLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-----ESEIKNVNGLMFHNNCENKS 171 G+RINP V P S+ G + K K + G+ H + Sbjct: 151 VLGIRINPQVDAGTLTDLSTGVPTSKFGIGIQHKDKIIDAYRRNKWLKGVHIHIGSQGFE 210 Query: 172 FLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-------PVKDFCQRLKE 220 +++ ++ QI + ++GGG+ + + + Sbjct: 211 IDSISSAAVKVMELTKEINTLLNKQITFFNMGGGLSVNFDTEQSKPTFTDYANHLKSILP 270 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES- 278 + E G + + + + + + + S H+ + Sbjct: 271 ELFNGDFLLITEFGRSYWAKCGVVISNIEYTKSSGDRAIAVCHSGANMHIRTVYQFPLWK 330 Query: 279 --------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 I + + G C A D+ + P+ G+ + D Y I+ Sbjct: 331 LRVTIFDKNGIRKHGDERMTDIAGPCCFAADVLVKERMLPPILRGEYVMVHDCGAYMISA 390 Query: 331 KNWFNGINMPTIAVKNVD-GTIKAIRE-FSYND 361 + +N P I +V+ I+ I++ + + Sbjct: 391 YSHYNLRLAPPIYSFDVNTKKIELIKKGETIEE 423 >gi|227498071|ref|ZP_03928244.1| diaminopimelate decarboxylase [Actinomyces urogenitalis DSM 15434] gi|226832509|gb|EEH64892.1| diaminopimelate decarboxylase [Actinomyces urogenitalis DSM 15434] Length = 411 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 55/396 (13%), Positives = 112/396 (28%), Gaps = 60/396 (15%) Query: 29 GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML---GHEKFGGETHA--------Y 77 G A K F + + Q G ++S E+ + ++ G + Sbjct: 13 GGTAFYAGKAFLTTAVGQMVLQEGMGIDTASRIELAVGLSALQEVDGVEAVDRAGRLGLH 72 Query: 78 NVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK----------IGLRINPSV 126 A EI A+ ++ ++ +++ + L + + +R+ V Sbjct: 73 GNAKTQAEIAVALAHRVGHLVLDSREEVDLAAAAVRGLREAGTYGPEETGAVMVRLTTGV 132 Query: 127 SYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + G E I + +++GL H + F Sbjct: 133 HAGGHEYIATAHEDQKFGLSVTTGAAREAIDAIIAAPELSLHGLHSHIGSQIMDLAGFRE 192 Query: 178 MLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------------CQRLKEF 221 + + E + LGGG + L Sbjct: 193 AARVVLTLRHEVARDTGILAEEVDLGGGYGIAYTVADPVPPSPAQVARVLADTVRSLCTE 252 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYLLY 275 + +EPG ++V +T V + + V VD + ++ L Sbjct: 253 LGDSVPHVSVEPGRSVVGPSTLTLYAVTGLKRVELGEGASRLYVSVDGGMSDNIRPALYD 312 Query: 276 QESATIYPNTGPYTA------MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 + N P A V G+ C +GD+ + +GD ++ Y Sbjct: 313 AAYTALVANRLPDPAAGLVRSRVVGKHCESGDVVVRDVDLPADLAVGDVLAVPATGAYGR 372 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N P +A + +R + D Sbjct: 373 SMASNYNLFTRPGVAWVHEGEQGWLLRPETVEDLLR 408 >gi|322504420|emb|CAM37403.2| putative ornithine decarboxylase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 636 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 54/397 (13%), Positives = 112/397 (28%), Gaps = 68/397 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ID +++ + + + V+ A+K + + L G +S E+ Sbjct: 231 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQLALLEVLGALGSGFDCASKGEIQ 288 Query: 65 LGHE----KFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + N + ++ + + + ++ K + Sbjct: 289 TVLDNHLVASPDDIIFANPCKQPGDMREAQARGVTYVTVDNLLEIEKISRL--MPSARAV 346 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RI + S +K + E +V G+ FH N + + + Sbjct: 347 IRIKTNDSKAKCAFSTKFGVPLNDVESLLQAARQFKVDVYGVSFHVGSSNSDPATYVSAV 406 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSEKYS----V 227 ++ F + + +GGG + + +D + ++ E+ V Sbjct: 407 RDAYHVFQQASQYGFNCTLLDIGGGFPSVETNTASGEATFEDIARAIRPVLEELFGGGDV 466 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH----VPDYLLYQES----- 278 I EPG +T L V + + V SS + + YQ Sbjct: 467 TIISEPGRYFTASTHALLVNVFASRKLRMSDVEKASSQALQSVVPMDEPEEYQYYVNDGL 526 Query: 279 ---ATIYPNTGPYT-----------------------------------AMVCGRSCLAG 300 + + G +C + Sbjct: 527 YHSFNCIIFDHAHPTLLLLNDGDGADAVEGNKEEGETSLSSRTRRPLRITTIFGPTCDSL 586 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 D +K+GD I D+ Y FNG Sbjct: 587 DCILRKQPFPEMKLGDWILVPDMGSYTTAAAAPFNGF 623 >gi|154333647|ref|XP_001563080.1| ornithine decarboxylase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 636 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 54/397 (13%), Positives = 112/397 (28%), Gaps = 68/397 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ID +++ + + + V+ A+K + + L G +S E+ Sbjct: 231 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQLALLEVLGALGSGFDCASKGEIQ 288 Query: 65 LGHE----KFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + N + ++ + + + ++ K + Sbjct: 289 TVLDNHLVASPDDIIFANPCKQPGDMREAQARGVTYVTVDNLLEIEKISRL--MPSARAV 346 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RI + S +K + E +V G+ FH N + + + Sbjct: 347 IRIKTNDSKAKCAFSTKFGVPLNDVESLLQAARQFKVDVYGVSFHVGSSNSDPATYVSAV 406 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSEKYS----V 227 ++ F + + +GGG + + +D + ++ E+ V Sbjct: 407 RDAYHVFQQASQYGFNCTLLDIGGGFPSVETNTASGEATFEDIARAIRPVLEELFGGGDV 466 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH----VPDYLLYQES----- 278 I EPG +T L V + + V SS + + YQ Sbjct: 467 TIISEPGRYFTASTHALLVNVFASRKLRMSDVEKASSQALQSVVPMDEPEEYQYYVNDGL 526 Query: 279 ---ATIYPNTGPYT-----------------------------------AMVCGRSCLAG 300 + + G +C + Sbjct: 527 YHSFNCIIFDHAHPTLLLLNDGDGADAVEGNKEEGETSLSSRTRRPLRITTIFGPTCDSL 586 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 D +K+GD I D+ Y FNG Sbjct: 587 DCILRKQPFPEMKLGDWILVPDMGSYTTAAAAPFNGF 623 >gi|187930984|ref|YP_001890968.1| diaminopimelate decarboxylase [Francisella tularensis subsp. mediasiatica FSC147] gi|187711893|gb|ACD30190.1| diaminopimelate decarboxylase [Francisella tularensis subsp. mediasiatica FSC147] Length = 417 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 124/389 (31%), Gaps = 35/389 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P ++ID+ LL + ++K + + + S Sbjct: 28 SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 E + D + L I + ++ + A+KL+ K Sbjct: 88 EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173 IGLR+ + + + + + + GL H + Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207 Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218 + + E + +EWI LGGG+ + ++ + + Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267 Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271 ++Y + E G ++V + L TT V +N ++ + +P Sbjct: 268 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327 Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 Y+ + ++ G SC+ D + F ++ GD++ + V YNI+R Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR-EFS 358 N F P++ + + + + +R + Sbjct: 388 NNEFI-HLKPSVILIDKNHQYQVLRVRQT 415 >gi|54113955|gb|AAV29611.1| NT02FT1732 [synthetic construct] Length = 417 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 124/389 (31%), Gaps = 35/389 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P ++ID+ LL + ++K + + + S Sbjct: 28 SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 E + D + L I + ++ + A+KL+ K Sbjct: 88 EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173 IGLR+ + + + + + + GL H + Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207 Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218 + + E + +EWI LGGG+ + ++ + + Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267 Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271 ++Y + E G ++V + L TT V +N ++ + +P Sbjct: 268 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327 Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 Y+ + ++ G SC+ D + F ++ GD++ + V YNI+R Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR-EFS 358 N F P++ + + + + +R + Sbjct: 388 NNEFI-HLKPSVILIDKNHQYQVLRVRQT 415 >gi|56707207|ref|YP_169103.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis SCHU S4] gi|110669677|ref|YP_666234.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis FSC198] gi|224456268|ref|ZP_03664741.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] gi|254371423|ref|ZP_04987424.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis FSC033] gi|254874045|ref|ZP_05246755.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] gi|56603699|emb|CAG44660.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320010|emb|CAL08043.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis FSC198] gi|151569662|gb|EDN35316.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis FSC033] gi|254840044|gb|EET18480.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158315|gb|ADA77706.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis NE061598] Length = 417 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 124/389 (31%), Gaps = 35/389 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P ++ID+ LL + ++K + + + S Sbjct: 28 SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 E + D + L I + ++ + A+KL+ K Sbjct: 88 EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173 IGLR+ + + + + + + GL H + Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207 Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218 + + E + +EWI LGGG+ + ++ + + Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267 Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271 ++Y + E G ++V + L TT V +N ++ + +P Sbjct: 268 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327 Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 Y+ + ++ G SC+ D + F ++ GD++ + V YNI+R Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR-EFS 358 N F P++ + + + + +R + Sbjct: 388 NNEFI-HLKPSVILIDKNHQYQVLRVRQT 415 >gi|290962739|ref|YP_003493921.1| siderophore biosynthesis decarboxylase [Streptomyces scabiei 87.22] gi|260652265|emb|CBG75398.1| putative siderophore biosynthesis decarboxylase [Streptomyces scabiei 87.22] Length = 426 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 51/377 (13%), Positives = 110/377 (29%), Gaps = 36/377 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D L ++ V+L A K + L Y+DG +S E+ Sbjct: 51 PAYVYDMTALRDHAARVRAALPER-VELYYAAKANPEPEILAALGPYVDGYEVASGGELA 109 Query: 65 LGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G A+ D DA+ + +L + A++ + + Sbjct: 110 HVAQAVPGRPLAFGGPGKTPDEIRDALERGVARFHVESEHELRMLGELARRAAPARPVGV 169 Query: 123 NPSVS-------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169 + A R + + + ++ L H + + Sbjct: 170 LLRFNLAVADGSLAGSALAMGGRPAPFGLDPGRAADVLRPLTDGTHPHLEPLGVHAHLAS 229 Query: 170 KSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224 + ++ + + +++GGG+ + +++ L ++ Sbjct: 230 GLDAPSLLSVARSVVDWATALDMPVREVNVGGGMAVDYTRPESRFAWQEYGAGLARLTDA 289 Query: 225 YSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD------------ 271 + +EPG A+ T VLD+ + V H+ Sbjct: 290 HPDLTLRIEPGRALTAYCGWYATEVLDVKRSHGEEFAVVRGGTHHLRTPATKGHDQPCSV 349 Query: 272 -YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + P+ + G+ C D+ ++ GDR++F Y N Sbjct: 350 LAVERWPHPWPRPSAEGERVTLAGQLCTPKDVLARHVRAPGLRAGDRVAFALAGAYAWNI 409 Query: 331 KNW-FNGINMPTIAVKN 346 + F P + + Sbjct: 410 SHHDFLMHPHPGFHIVD 426 >gi|300787026|ref|YP_003767317.1| ornithine decarboxylase [Amycolatopsis mediterranei U32] gi|299796540|gb|ADJ46915.1| ornithine decarboxylase [Amycolatopsis mediterranei U32] Length = 384 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 103/356 (28%), Gaps = 26/356 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++D + G + A+K A + D L G + E Sbjct: 18 PTPCLVVDTDAVAARAGEFGAAF--PGALIRYAVKANPAPPVLDALVAAGIGFDVAGPAE 75 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIG 119 + L AY K A + + ++ A I Sbjct: 76 LELCLGRGAAPAEIAYGNPIKKPREIAFAFGRGVREFTSDAPADVDHLGRYAPGAAVSIR 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---S 176 + ++ S + F P L + + FH + + Sbjct: 136 VVLDAPDSATPFGRKFGCAPAEALDLVLRAAALGLRPGI---AFHVGSQQPDVTAWGIGV 192 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKD------YPVKDFCQRLKEFSEKYSVQIY 230 A + E ++ ++LGGG + L ++ Sbjct: 193 ATAAKLFAEAAAHGVEMTRLNLGGGFATAHRTAVPSLAAYAATIAAALDAAFPAGRPELL 252 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATIYPNT 285 LEPG +V + L T V+ +++ + + + + + Y+ + Sbjct: 253 LEPGRVLVADAGLLRTEVVLVADRGERRWVYLDIGRYNGLAEAENEAIAYRFEPVGCHDG 312 Query: 286 GPYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 ++ G +C D+ + + ++ GDR+ Y + + FNGI Sbjct: 313 PSGPVVLAGPTCDGDDVLYQRTRYELPRSLRTGDRLDVPGTGAYTASYASVGFNGI 368 >gi|283769531|ref|ZP_06342427.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Bulleidia extructa W1219] gi|283103799|gb|EFC05185.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Bulleidia extructa W1219] Length = 369 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 53/380 (13%), Positives = 122/380 (32%), Gaps = 39/380 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPYY++D+ LL + I L ++K + ++L + +D S Sbjct: 1 MKTPYYVMDENVLLKRICDIKKIADGKWG-LCYSIKANPF--LVESLFETVDQLEVCSPG 57 Query: 62 EVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + + K + K + +A F ++ + ++ Sbjct: 58 EMKICIDRKVPAFKILMSGVNKTVEDIQEAFDYGVRLFSFESIVHFERLQEV-------- 109 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCENKSFL 173 S+ K ++ G +D + G+ + + K Sbjct: 110 -----LKNSHEKVKAYIRLTSGNQFGMSVEDTEYLFEHPDPQIEIIGIHYFAGTQRKKSQ 164 Query: 174 CFSAMLKNIEKEFGHFITQIEW---ISLGGGIHFTDKDYPVKD----FCQRLKEFSEKYS 226 + L+ ++ + + + + G G+ + +++ Sbjct: 165 HQISELEQLDAQLKLWEKKYRLSLALEYGPGLPVPLFVGDDFSEDLAPLKAIQDSLSSLK 224 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ----ESATIY 282 ++ +E G +V N + + V DI + + V + H+ Y Sbjct: 225 REVMVEMGRFMVYNCGSYYSQVQDIKKLNDSYVAILDGGIHHLNYYGQMMGMKVPLLESP 284 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPT 341 N + G C D+ +KIGD + F + Y + F +P+ Sbjct: 285 QNEEMADYCLAGSLCTTADVLVRKVTLPKLKIGDVLVFHNCGAYGVTEGIGLFLSRKLPS 344 Query: 342 IAVKNVDGTIKAIR--EFSY 359 + + + ++ +R E +Y Sbjct: 345 VYKLSGNK-LELLRDQEETY 363 >gi|258655147|ref|YP_003204303.1| Orn/DAP/Arg decarboxylase 2 [Nakamurella multipartita DSM 44233] gi|258558372|gb|ACV81314.1| Orn/DAP/Arg decarboxylase 2 [Nakamurella multipartita DSM 44233] Length = 403 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 111/356 (31%), Gaps = 25/356 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP +D + + GV L A+K + + TL +S E+ Sbjct: 24 TPVLRVDCAVVQARYRRLAAVL--PGVDLHYAVKANPSPPVLRTLAGLGARWDVASPGEI 81 Query: 64 MLGHEKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 H +Y K A + + S K A +I +R+ Sbjct: 82 EAVLAVDPDPRHLSYGNPIKKSSDIAAAARRGVRRYTVDSPAELAKVSAHAPGAQILVRL 141 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S + + + L R + V G+ FH + + + L Sbjct: 142 STSGAGADWPLGGKFGCPEREARTLLRTAAAAGHEV-GISFHVGTQQRDPGAWDGPLAAA 200 Query: 183 ---EKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEP 233 ++ ++ ++LGGG + ++ + EP Sbjct: 201 GRLDRGLRGAGARLSTVNLGGGFPAGMLGRTQSAARYGQAIRDAVRRAFGAQPPALMAEP 260 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL-YQESATIYPNTGPY-- 288 G +V + TL + V+ +S+ + + V Y + + GP+ Sbjct: 261 GRFLVADAGTLVSEVVLVSDRGGERWVYLDAGLFTGLVEAYGESLRYRLAVERTGGPFAS 320 Query: 289 ---TAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337 A++ G +C + D+ + ++ GDR+ F Y + FNG Sbjct: 321 ATTEAILAGPTCDSLDVLYRRHRYRLPADLRPGDRVHFLSAGAYTASYSTVGFNGF 376 >gi|196229284|ref|ZP_03128149.1| Orn/DAP/Arg decarboxylase 2 [Chthoniobacter flavus Ellin428] gi|196226516|gb|EDY21021.1| Orn/DAP/Arg decarboxylase 2 [Chthoniobacter flavus Ellin428] Length = 393 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 47/363 (12%), Positives = 102/363 (28%), Gaps = 27/363 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP Y + L A +LL +LK + ++ +S Sbjct: 23 LETPRYFYSGELLTLAWHALHSSLP-ADAQLLYSLKANPHPTIVRYFAEHGALFDVASRG 81 Query: 62 E--VMLGHEKFGGETHAYNVAYKDCEIDAVLSN----CDTIIFNTVSQLNKFKDKAQKLH 115 E ++L + + ++ + + + + + + Sbjct: 82 EMELLLATQGSLQRAVWISPCKREADYLWAVQHGLGASVIDSREEIGTVRRVAATQPDTM 141 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEIKNVNGLMFHNNC----EN 169 LR+ + + L ++ L E + + + + GL + E Sbjct: 142 PSYLLRVQRRAASAGTSLWADSQFGVTLDEAIEFTHTLRRDGIQIAGLHGYFASNLFAEQ 201 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + ++ T + + +GGG + + RL++ + + Sbjct: 202 EIAQNTQDLMAQALTWQASTGTSMRVLDVGGGFGWPLGVEDGELSLPRLRDCLAPLAAEF 261 Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA--- 279 + E G + L TV+ + E +V D + + Sbjct: 262 SPGTALWFESGRFLTAGAGVLVLTVMSVKERPGTTSVVLDGGMNIFGLPSMRLGFRPLTV 321 Query: 280 ---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFN 335 + G C GD F E P+K GDR++ Y + F Sbjct: 322 ILLAREWAGPLQPHTLFGPLCTPGDKFCEKVLLPPLKAGDRLAILHAGAYGATAGRSSFL 381 Query: 336 GIN 338 Sbjct: 382 SFP 384 >gi|62261067|gb|AAX77957.1| unknown protein [synthetic construct] Length = 452 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 124/389 (31%), Gaps = 35/389 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P ++ID+ LL + ++K + + + S Sbjct: 54 SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 113 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 E + D + L I + ++ + A+KL+ K Sbjct: 114 EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 173 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173 IGLR+ + + + + + + GL H + Sbjct: 174 IGLRVADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 233 Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218 + + E + +EWI LGGG+ + ++ + + Sbjct: 234 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 293 Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271 ++Y + E G ++V + L TT V +N ++ + +P Sbjct: 294 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 353 Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 Y+ + ++ G SC+ D + F ++ GD++ + V YNI+R Sbjct: 354 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 413 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR-EFS 358 N F P++ + + + + +R + Sbjct: 414 NNEFI-HLKPSVILIDKNHQYQVLRVRQT 441 >gi|312376500|gb|EFR23563.1| hypothetical protein AND_12667 [Anopheles darlingi] Length = 681 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 114/356 (32%), Gaps = 24/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +++ +++ +K V A+KC + L G +S E+ Sbjct: 32 PVNVLNLDDIVDKHKNWR--QKLPTVVPFYAVKCNNHPAILQLLVALGCGFDCASRCELQ 89 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E Y K + A + F++V +L K + +R Sbjct: 90 TILGLGVAPEKIIYANPAKTKDSILYARKMGVKRMTFDSVDELEKIAQLYPDAELVLRIR 149 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + P R + +V G+ FH C ++ + ++ Sbjct: 150 YDAREAVLPLGRKFGCDPD-REALPLLRCAKRHQLSVIGVSFHVGCGSRDGETYYWAIRK 208 Query: 182 IEKEFG---HFITQIEWISLGGGIH--FTDKDYPVKDFCQRL---KEFSEKYSVQIYLEP 233 + F Q+ + +GGG F + + ++ ++++ EP Sbjct: 209 AIEIFDSASQLGMQMHLLDIGGGYPGGNDRTFDDHVHFINKALNEQIVQQRRNIEVIAEP 268 Query: 234 GEAIVTNTTTLNTTVL----DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY- 288 G V + T VL D ++ + + + + + Y E A Sbjct: 269 GRYCVESAVTALVNVLAKSYDRDDSGEIIRVRYYLDDGLYGSFDWYDELAIPEVQEHRRS 328 Query: 289 -----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 +++ GR+ DI + ++ D + F + Y + FNG+++ Sbjct: 329 GSPLIPSVLYGRTMCDNDIIAKEILLPEHEVDDCLVFPNRGAYGMALGRGFNGVSL 384 >gi|260951019|ref|XP_002619806.1| hypothetical protein CLUG_00965 [Clavispora lusitaniae ATCC 42720] gi|238847378|gb|EEQ36842.1| hypothetical protein CLUG_00965 [Clavispora lusitaniae ATCC 42720] Length = 447 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 111/364 (30%), Gaps = 34/364 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + V+ A+KC + L + +S E+ Sbjct: 67 FFVADLGQVFRSFQLWKETLPR--VQPFYAVKCNTDPHVVSLLGRMGANFDCASKTEIDT 124 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR-IN 123 F + Y K + + + +K K +I +R + Sbjct: 125 VLGLGFTPDRIIYANPCKTNSFIRHACEKNVNLTTVDNANELYKLKRFHPRTRILIRIVT 184 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S + + +V G+ FH F F +K+ Sbjct: 185 DDESAQCRLSTKFGCTVEVAVNQLLPLCRELDLDVAGVAFHVGSGATCFDSFFHAIKDAR 244 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLEPGE 235 + F ++ + +GGG D + + L F +++ +Q EPG Sbjct: 245 RIFDAGEQLGLRLTILDIGGGFEPCSFDAATQVVNRALDTFFPTTYAQQHGMQFIAEPGR 304 Query: 236 AIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287 +V N TL T ++ D + ++ ++ ++ V ++ L + Sbjct: 305 FMVANAFTLATHIIARRDLDSNSGMEAMLYINDGVYGNLNCVLFDHQHPEAKVLKHAGKM 364 Query: 288 -------------YTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 Y + G +C D + V +GD + F ++ Y Sbjct: 365 FPGEMDGETQSQHYNFSIWGPTCDGLDCVSSKTALPANVGVGDWLYFPELGAYTSAATTS 424 Query: 334 FNGI 337 FNG Sbjct: 425 FNGF 428 >gi|255028451|ref|ZP_05300402.1| hypothetical protein LmonL_03126 [Listeria monocytogenes LO28] Length = 280 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 37/279 (13%), Positives = 81/279 (29%), Gaps = 32/279 (11%) Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHNNCENK 170 R+ P + + S+ G + S ++ GL H + Sbjct: 1 RVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIF 60 Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKEFSEK- 224 F + I + + + ++LGGG + + +++ ++ Sbjct: 61 ETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEV 120 Query: 225 ---------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273 +I++EPG ++V T V E + + ++ L Sbjct: 121 RDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRPAL 180 Query: 274 LYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + T + G+ C +GD+ G+ ++ Y Sbjct: 181 YDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGAYGYA 240 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 + +N I P + + +Y + N LS Sbjct: 241 MASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 279 >gi|257064415|ref|YP_003144087.1| diaminopimelate decarboxylase [Slackia heliotrinireducens DSM 20476] gi|256792068|gb|ACV22738.1| diaminopimelate decarboxylase [Slackia heliotrinireducens DSM 20476] Length = 395 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 45/386 (11%), Positives = 105/386 (27%), Gaps = 47/386 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + N L V L A+K + + Q S E Sbjct: 14 GTPSYVFDLEAFRNRLRECQ-AIVGPEVHLCFAMKANP--WLINAAAQVASKLEVCSPGE 70 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L + Y+ K+ A+ + ++ + A++ + + Sbjct: 71 LDLCERANINPDQIVYSGVNKEICDITHAIEYGAGVLTAESLLHVEYIDQVAREHNLVVD 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENKSF 172 + + S+ G + + + G+ + + Sbjct: 131 VLPRLN-------------AGSQFGMSKDELLWLVDNRDRFPGLKLVGIHYFVYTQRLKL 177 Query: 173 LCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEFSEK 224 + + +E + G G+ + + + Sbjct: 178 KHQRKEMAMLSDLIDELANEHDFVVERLEYGPGLGVPYFMDDDFSDDLLPIREIADDLRA 237 Query: 225 Y--SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---DYLLYQESA 279 ++ +E G + T T +D+ N + H+ + Sbjct: 238 LAAKTELTIEMGRFFASPCGTYFTKAMDLKSNKGTNYAILDGGMHHITYFGQMMGMHVPP 297 Query: 280 TIYPNTGPY-------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK- 331 + +CG C D+ ++ GD ++F Y + Sbjct: 298 IVNLTREAEDRESEVAEWCLCGSLCTVNDVLVRAVELDSLQRGDVLAFGRCGAYAVTEGV 357 Query: 332 NWFNGINMPTIAVKNVDGTIKAIREF 357 + F +P + ++ DG++ R+F Sbjct: 358 SLFLSRRLPRVLLREADGSVVLARDF 383 >gi|118498245|ref|YP_899295.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida U112] gi|194324429|ref|ZP_03058202.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida FTE] gi|95045105|gb|ABF50970.1| FigC [Francisella novicida U112] gi|118424151|gb|ABK90541.1| pyridoxal-dependent decarboxylase [Francisella novicida U112] gi|194321494|gb|EDX18979.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida FTE] Length = 417 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 56/390 (14%), Positives = 121/390 (31%), Gaps = 37/390 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P ++ID+ LL + ++K + + + S Sbjct: 28 SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + D + L I + ++ + A+KL+ Sbjct: 88 EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147 Query: 120 LRINP-------SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 + + + S F L D + + GL H + Sbjct: 148 IGLRIADNKTPQNWSRFGFALTDQQNNSDIF-TTIDKIQQIANIQLAGLHCHIGTNIRDI 206 Query: 173 L----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQR 217 + + E + +EWI LGGG+ + ++ + Sbjct: 207 SRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAAT 266 Query: 218 LKEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVP 270 + ++Y + E G ++V + L TT V +N ++ + +P Sbjct: 267 IIAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIP 326 Query: 271 DYLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 Y+ + ++ G SC+ D + F ++ GD++ + V YNI+ Sbjct: 327 TISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNIS 386 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIR-EFS 358 R N F P++ + + + + +R + Sbjct: 387 RNNEFI-HLKPSVILIDKNQQYQVLRVRQT 415 >gi|332184801|gb|AEE27055.1| Diaminopimelate decarboxylase [Francisella cf. novicida 3523] Length = 416 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 131/386 (33%), Gaps = 36/386 (9%) Query: 4 TPYYLIDKQKLLNNLDTALY--IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P ++ID+ LL + +++ ++K + + Q S Sbjct: 28 SPCFIIDENALLERANFFQQTILKQYKNSIAAYSVKTQSLSTIIQKFYQAGFIPEVVSSD 87 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E L + + D + L I + ++ + A++L+ Sbjct: 88 EFQLIEKLQLWDKGIIFNGPYKNDASLIKALRLNAIINCDHFDEILRIAKIAKELNITAK 147 Query: 120 LRINP-------SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 + + + S F L++ + + + GL H + Sbjct: 148 IGLRVADNKTPQNWSRFGFALSNQQNNDDIFAV-IDKIQQIQNIQLAGLHCHIGTNIRDI 206 Query: 173 LCFSAMLK----NIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQR 217 F+AM K E+ + ++WI LGGG+ + + ++ + + Sbjct: 207 SRFAAMAKNIAGLAERILTKYKLTLDWIDLGGGLAGISPTLKDKQLHPYRPFDLELYSRT 266 Query: 218 LKEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVP 270 + ++Y + E G ++V + L TT V +N ++ + +P Sbjct: 267 IIAPLKEYLNKTNNKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIP 326 Query: 271 DYLLYQESATIYPNTGPYTAMVC-GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 Y+ Y + G SC+ D + F ++ GD++ + V YNI+ Sbjct: 327 TTSTYRHPIYHLKTDDDYKKTILLGPSCMQHDFLDDDVFLPKLRYGDKLLIDGVGAYNIS 386 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIR 355 R N F P++ + + + +R Sbjct: 387 RNNEFI-HLKPSVILIDKNQQYHVLR 411 >gi|195997033|ref|XP_002108385.1| hypothetical protein TRIADDRAFT_19621 [Trichoplax adhaerens] gi|190589161|gb|EDV29183.1| hypothetical protein TRIADDRAFT_19621 [Trichoplax adhaerens] Length = 351 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 100/349 (28%), Gaps = 20/349 (5%) Query: 21 ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNV 79 + V ALKC G TL + G S E+ + E + Sbjct: 1 MQWFSLLPRVHPYFALKCNVDRGFLATLLAFGFGFEGVSKAEIDTVLKMGASPEKIIFAN 60 Query: 80 AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139 YK ++ + + + +K K ++ LR+ SK+ L Sbjct: 61 PYKPISHIKYAAHQNVNLMTFDNVTELYKIKEFYPKARLLLRLKFDDPRSKYELGKKYGV 120 Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWI 196 NV G+ +H F ++ + F + + Sbjct: 121 EIDEVTHILQIARELQLNVVGISYHVGGGYTDACNFLKAIELAKTAFNYAKSIGINFNVL 180 Query: 197 SLGGGIHFTDKDYPVKDFC----QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252 +GGG K K F + ++ I EPG TL V Sbjct: 181 DIGGGFPGQANSLFKKICSNISSALDKHFPVEDNISIIAEPGRYFAETAFTLVLCVAGKR 240 Query: 253 ENIKNLVIVDSSVEAHVPD----------YLLYQESATIYPNTGP--YTAMVCGRSCLAG 300 E + + E +V D + + Y+ + G + Sbjct: 241 EIYEIDQKIPKKFEYYVNDGRYGSFSEFLMSYGCQYPQVIGKKSETLYSTRLWGPTVSGS 300 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 D E + +++GD I FE++ Y FNG+ P G Sbjct: 301 DCIFEECYLPELEVGDLIYFEEMGAYTTVLGTNFNGLTRPVSYYVIDQG 349 >gi|301106921|ref|XP_002902543.1| diaminopimelate decarboxylase, putative [Phytophthora infestans T30-4] gi|262098417|gb|EEY56469.1| diaminopimelate decarboxylase, putative [Phytophthora infestans T30-4] Length = 527 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 55/382 (14%), Positives = 107/382 (28%), Gaps = 47/382 (12%) Query: 3 KTPY-YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P L + L LA+K G+ G +S+ Sbjct: 105 DSPLTNLFNWDAFQKRLANLHTAFPEPQFNHALAVKTNPTRGLLRGACAKGFGAECASIA 164 Query: 62 EVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-------- 111 E F Y + E+ +L I + ++ K + Sbjct: 165 EAKHALSLGFEPRKVVYDSPCKTIGELREMLMAGVYINLDNEEEIRKVNEIFTELGDSEQ 224 Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLM 162 K +++GLRINP V S+ G + I + + G+ Sbjct: 225 TKNKHAEQLGLRINPVVGGGTIDATSTATVTSKFGLPLTAETKSRLLEIFKQNSWLQGVH 284 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTD-----KDYPVK 212 H + +A K Q+ + +GGG+ + Y Sbjct: 285 VHVGSQGCPLDLLTAGAKRAVAFALEVNAYVGHKQVSVLDIGGGMLTVYDGGESEAYDFN 344 Query: 213 DFCQRLKEFSEKYSVQ----IYLEPGEAIVTNTTTLNTTVLDISE-------------NI 255 ++ ++ + I E G ++ + V I + + Sbjct: 345 EYADVVRRQVPELFTSGFSSIITEFGRSVFVKPGVTVSKVEAIKDWAGQHIAVVHVGADQ 404 Query: 256 KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIG 315 +H L P++ + G C +GD + P+++G Sbjct: 405 FPRTAYLPEQWSHCITVLDSHGRTKTNPSSDYVRQDIAGPLCFSGDFLAKQLLLPPIQVG 464 Query: 316 DRISFEDVAGYNINRKNWFNGI 337 D + D GY ++ + +N Sbjct: 465 DFVVIHDTGGYTMSMHSKYNSR 486 >gi|167644230|ref|YP_001681893.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter sp. K31] gi|167346660|gb|ABZ69395.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter sp. K31] Length = 420 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 44/339 (12%), Positives = 94/339 (27%), Gaps = 23/339 (6%) Query: 20 TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYN 78 A + + + A+K + + L +SL E+ L + G A+ Sbjct: 31 AARWFQAEFKGDVFYAVKANPSPWVIRELADAGVRSFDVASLNEIELVSQHAPGSRMAFM 90 Query: 79 VAYKDCEID---AVLSNCDTIIFNTVSQLNKFKDK---AQKLHKKIGLRINPSVSYSKFI 132 K T F+T +L K +D A+ L+ + + + + Sbjct: 91 HPVKSRVAISAAYFDHGVRTFSFDTHEELAKIQDATGAAKDLNLIVRMGVQADGAAYSLS 150 Query: 133 LADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ 192 P + +++ G+ FH + + A + + Sbjct: 151 GKFGVEPHNAPALLL--AARRATQDLMGVSFHVGSQCMRPTAYQAAMAQASRALVRAGVL 208 Query: 193 IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252 + + +GGG D + + ++ + E + L + Sbjct: 209 ADVVDVGGGFPSIYPGMVPPDMSEYMAAIDRGFNDMMVHESTQLWCEPGRALVAEASSVL 268 Query: 253 ENIKNLVIVDSSVEA----------HV---PDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 ++ + H+ Y++ G +C + Sbjct: 269 VKVELKKGDALYLNDGSYGSLFDAAHMKWPFPVKAYRKDGGEVSEEALRPFRFYGPTCDS 328 Query: 300 GDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 D G F+ + GD I + Y + FNG Sbjct: 329 VDHMPGPFYLPDGIDEGDYIEIGMLGAYGVAMATRFNGF 367 >gi|157103351|ref|XP_001647941.1| ornithine decarboxylase [Aedes aegypti] gi|108884773|gb|EAT48998.1| ornithine decarboxylase [Aedes aegypti] Length = 408 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 95/363 (26%), Gaps = 27/363 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +L + L+ +++ VK A+K + + G +S+ EV Sbjct: 36 PLHLTEVDTLVK--RHYEWLQHLPRVKPYYAVKSNDEASLVEATVLMGLGYDCASMAEVR 93 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI-IFNTVSQLNKFKDKAQKLHKKIGLRI 122 E E + K + +F++ +L K + I R Sbjct: 94 RMLELGVERERIIFAQPQKTIVSLQYARKHKILTVFDSECELRKIHQHYPEAEVLIRYRF 153 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAML 179 + S + + + V G F+ F Sbjct: 154 DSKKSKVNLGSKFGCETENES-KSLLHVAKQLGIKVVGWCFNVGSGCTDADVFYAAIKKG 212 Query: 180 KNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + I + I LGGG ++Y V + + + I+ EPG Sbjct: 213 REIHDYATSIGFKFRMIDLGGGFMGDKGCGIEEYAVHINRALEECYPASEDIFIFAEPGR 272 Query: 236 AIVTNTTTLNTTVLDISENIKNLV-----IVDSSVEAHVPDYLLYQESATIYPNT----- 285 T + V V + Sbjct: 273 YYCAAAVTSISPVHGKRILCNENDPLKIEQVFYYFNDGMYGTFYSPRYRNQTLYPIVWKS 332 Query: 286 -----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 Y + G +C D F + +++ D + FE+ Y FNG +P Sbjct: 333 GGNLGTTYKTTLFGPTCDGNDFFAKDIDLPELEVSDFVVFENQGAYARVHSCRFNGFCLP 392 Query: 341 TIA 343 + Sbjct: 393 KVI 395 >gi|294816530|ref|ZP_06775173.1| Putative diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|326444863|ref|ZP_08219597.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294329129|gb|EFG10772.1| Putative diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 430 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 56/375 (14%), Positives = 110/375 (29%), Gaps = 40/375 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P YL D L + V+L A K + L Y+DG +S E+ Sbjct: 20 PAYLYDLGALREHAAAVRAALPER-VELYYAAKANPETEILTALAPYVDGYEVASGGELA 78 Query: 65 LGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 G A+ + A+ S + +L D A + + + + Sbjct: 79 HVARAVPGRPLAFGGPGKTPEEIRAALASGVGRFHVESAHELAVLADLAARARVRARVLL 138 Query: 123 NPSVSYSKFILAD----PNRPFSRLGEKCKDKI---------ESEIKNVNGLMFHNNCEN 169 +++ +L + G D S + G+ H Sbjct: 139 RFNLAVPGELLDGSALAMGGRPAPFGIDPADADAVVRTLTEGSSPWLELFGIHAHLASGL 198 Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222 + +++ + + +++GGG+ + + + + L + Sbjct: 199 DARRQLAVAASVTRWAAALTARHGVPLREVNVGGGMAVDYARPGERFDWAAYGRGLAALA 258 Query: 223 EKYSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----------- 270 +++ + +EPG A+ T VLD+ + V H+ Sbjct: 259 DEHPDTVLRIEPGRALTVYCGWYATDVLDVKRSRGEDFAVVRGGTHHLRTPATKGHDQPC 318 Query: 271 ---DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGY 326 + GP + G+ C D+ P++ GDR+ F Y Sbjct: 319 AVLPADDWPHPWPRPATGGPGPVTLVGQLCTPKDLLARAVPLTAPLRAGDRVLFALAGAY 378 Query: 327 NINRKNW-FNGINMP 340 N + F P Sbjct: 379 AWNISHHDFLMHPRP 393 >gi|218190653|gb|EEC73080.1| hypothetical protein OsI_07045 [Oryza sativa Indica Group] gi|222622767|gb|EEE56899.1| hypothetical protein OsJ_06555 [Oryza sativa Japonica Group] Length = 229 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 80/223 (35%), Gaps = 14/223 (6%) Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKD 213 G H+ + F + ++ N E ++E++++GGG+ D Sbjct: 6 EGNSTHSRTQVDIFRDAAGLMVNYVDEIRAQGFELEYLNIGGGLGIDYHHTDAVLPTPMD 65 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDY 272 ++E + + +EPG +++ NT V + N IV A + Sbjct: 66 LINTVRELVLSRDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPS 125 Query: 273 LLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 L + P T + G C + D G+ G + D Y + Sbjct: 126 LYGAYQHIELVSPSPDAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCM 185 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYND---YYNNLS 367 + + +N P DG+I IR S++D +++NLS Sbjct: 186 SMASTYNLKLRPPEYWVEDDGSIAKIRRGESFDDYMKFFDNLS 228 >gi|238497239|ref|XP_002379855.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357] gi|220694735|gb|EED51079.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357] Length = 394 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 100/343 (29%), Gaps = 25/343 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D +++ ++ A+KC + L++ +S E+ Sbjct: 35 PFFVADGSRIVEQHLRWKSSL--PDIQPFYAVKCNSDVNFLRYLDRLGVNFDCASQGEIE 92 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L + K + + K K + LRI Sbjct: 93 LILSLGVDPSRIIFAHPCKSISALHFAAKQGIRWATFDNIDELEKVKQHSPQIGLLLRIF 152 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 +K L D + + G+ FH F+ ++ Sbjct: 153 AEDDGAKVCLGDKFGAPWNTTVALLKRARELHLQIVGVSFHIGSGASDPEAFTTAIQQAR 212 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F + + +GGG T+ ++ L V++ EPG T Sbjct: 213 HVFDQGERLGFNMTVLDVGGGFQHTNFEFMASSLRPALAREFGDRPVRVIAEPGRFYATP 272 Query: 241 TTTLNTTVLDISEN------------------IKNLVIVDSSVEAHVPDYLLYQESATIY 282 TL V+ + S E ++P + E + Sbjct: 273 CYTLVCKVIARRTHIGAAPSNPADMLYQNDGLYGCFSCGWSEGEEYMPVLVKQNEGRDDH 332 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVA 324 +G + + G +C + D + + VK+GD + ++D+ Sbjct: 333 RESGEHRYSLWGPTCDSIDQIAKEVVMDGEVKVGDWLVYKDMG 375 >gi|316970259|gb|EFV54235.1| ornithine decarboxylase [Trichinella spiralis] Length = 389 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 53/374 (14%), Positives = 107/374 (28%), Gaps = 34/374 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++L D KL+ + + A+KC + L +S E+ Sbjct: 19 FFLFDLGKLIRLHQRWIEHL--PQIHPFYAVKCNDNKLLLSLLASMGVNFDCASKNEIET 76 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E + K N + F+ +L K K + + Sbjct: 77 VLSIGVSPERIIFANPCKPRSAIEYANSQNVRYMTFDNEQELQKIHSLYPKSELLMRIST 136 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + F P + E K I K V E+ ++ A + + Sbjct: 137 FNYNAVISFEKKFGCNPITEAPELLKKAIVLGCKVVGIWSG--CRESSAYTNSIANARKL 194 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKD-------YPVKDFCQRLKEFSEKYSVQIYLEPGE 235 F ++ + +GGG ++ ++ F +V + EPG Sbjct: 195 FDLGNQFGCPLKLLDIGGGFSAVHENGALPFESLAMEINQALSFYFPSDMNVTVIAEPGR 254 Query: 236 AIVTNTTTLNTTVL------------------DISENIKNLVIVDSSVEAHVPD-YLLYQ 276 L T V+ DI + S + + + Sbjct: 255 YYAAKPFQLCTRVIGYRKVAASKITENPADDADIGFMYFINDGIYGSFNCILTENTVPQG 314 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + + Y + V G++C + DI + + + + F+++ Y++ FNG Sbjct: 315 QLLKKRKASKTYWSTVWGQTCDSLDIILKKCQLPELFENELLLFQNMGAYSLTVSTEFNG 374 Query: 337 INMPTIA-VKNVDG 349 + + D Sbjct: 375 FSRTKVYPYIKEDD 388 >gi|296283800|ref|ZP_06861798.1| ornithine/diaminopimelate/arginine decarboxylase,family protein [Citromicrobium bathyomarinum JL354] Length = 420 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 42/376 (11%), Positives = 103/376 (27%), Gaps = 34/376 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + L + + + A+K + + +DG +S E Sbjct: 46 DTPLFVYSRDMLDARMAALRAAMPESLA-IHFAVKANPHPDVIAHMAGLVDGFDLASGGE 104 Query: 63 -VMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 +L G ++ + EI A + T+ + ++ + + + L + + Sbjct: 105 LAILQGVGIDGAHISFAGPGKRPREIRAAIEAGVTLNCESETEAERALEIGRDLGIQPKV 164 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCENKS-- 171 + + + ++ ++ + I+++ GL + + Sbjct: 165 AVRVNPDFDMRGSGMKMGGGAKQFGLDAQRVPALIRHLIDGGAQWRGLHIYTGSQTLEAD 224 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--- 226 +L + ++LGGG + Sbjct: 225 AVIETQGHVLDLAARIAREVGQPCPALNLGGGFGIPYFAGNEPLDIGAIGAALGDRFANL 284 Query: 227 ------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272 ++ +E G +V ++D E+ + ++ H Sbjct: 285 PEELAETEMAIELGRYLVGEAGVYLAQIVDRKESQGEIFLITDGGLHHQLAASGNFGAVV 344 Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 AT + A V G C D + ++GD ++ Y + Sbjct: 345 RRNYPLAIATKFDAPAVEVANVVGCLCTPLDRLADKAELPRAEVGDLVAVFCAGAYGASA 404 Query: 331 KN-WFNGINMPTIAVK 345 F G + Sbjct: 405 SPMHFLGQGPALEILV 420 >gi|285017513|ref|YP_003375224.1| diaminopimelate decarboxylase [Xanthomonas albilineans GPE PC73] gi|283472731|emb|CBA15236.1| hypothetical diaminopimelate decarboxylase protein [Xanthomonas albilineans] Length = 403 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 53/371 (14%), Positives = 105/371 (28%), Gaps = 30/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D L + T AG +L A K A + TL ++DG ++S E+ Sbjct: 27 AYVYDLAALHAHASTLRTQLP-AGCELFYAAKANAEPPLLRTLAPWVDGFEAASGGELQW 85 Query: 66 GHEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 H G T + D E+ + ++S+L + A + + + + Sbjct: 86 LHHHQPGRTLLFGGPGKLDAELQLATILPHCSVHVESLSELQRLAHIAASASRLVSVFLR 145 Query: 124 PSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 +++ + +S ++G FH + Sbjct: 146 LNIAAPDMPDTRLVMGGRPSPFGLDLLDLDAALRLLRDSPALRLDGFHFHLMSHQRDAQV 205 Query: 175 FSAMLKNIEK----EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226 ++ + + + ++ GGG + FC L + Sbjct: 206 HLRLIAHYLQTVQGWRQTYALGPLTVNAGGGFGVDYAAPEASFDWAAFCAGLPPLLRAHG 265 Query: 227 V--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYP 283 ++ LEPG + VLDI + + H + Sbjct: 266 TDLRLRLEPGRYVSAACGWYLMEVLDIKRSHGAYFAIGRGGTHHFRTPAAQGHDHPFRVL 325 Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNG 336 + G+ C D+ + GD ++F Y N + F Sbjct: 326 RGTQAPMLCDAQVTLVGQLCTPKDVLARAQPVAALAPGDCLAFSLAGAYAWNISHQQFLM 385 Query: 337 INMPTIAVKNV 347 P + + Sbjct: 386 HPPPHMLFLDS 396 >gi|209964337|ref|YP_002297252.1| diaminopimelate decarboxylase, putative [Rhodospirillum centenum SW] gi|209957803|gb|ACI98439.1| diaminopimelate decarboxylase, putative [Rhodospirillum centenum SW] Length = 422 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 119/373 (31%), Gaps = 30/373 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYM-DGTTSSS 59 TP Y+ ++L NL ++ G + A+K + + G + S Sbjct: 49 GTPAYVYSGPRVLENLRRLKAALESTGLPHAIRYAMKANRHGPLLTWMKASGLCGIDACS 108 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK 116 E+ + F E +Y AVL+ + +++S L + + Sbjct: 109 PNELRFAVQCGFRPEEVSYTATSVSEADLAVLARHPETWVNADSLSTLRRLAAVSPGREI 168 Query: 117 KIGLRINPSVSYSKFILADPNRP-FSRLGEKCKDKIESEIKN------VNGLMFHNNCEN 169 I + V Y + L + S+ G E+ V G+ FH Sbjct: 169 GIRVNPALGVGYGENQLLRYSGERTSKFGIYRDRFEEALALAASHGLTVRGIHFHVGWGY 228 Query: 170 KSFLCFSAMLKNIEK-EFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK 224 + + E F + Q ++LGGG+ ++ + +++ Sbjct: 229 LNAQLPAWAEVVRECLWFLDRVPQARLVNLGGGLGVPHAAGDRPLDLEAWAAVIRDSFAG 288 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------VP----DY 272 +++++EPG+ +V + L + + +P Sbjct: 289 RGIEVWVEPGDYVVKDAGVLLLQANTVERKRATTFVGVDGGFNLAVEPVFYRLPCEPVPA 348 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 L+Q+ A + + G A D++ E V+ GD I+F + GY + Sbjct: 349 RLHQDPARAWAADALAPVSIAGNINEALDLWAEALPFPAVEEGDVIAFLNAGGYAAAMGS 408 Query: 333 WFNGINMPTIAVK 345 + + Sbjct: 409 NHCMRAQASEHLL 421 >gi|288958285|ref|YP_003448626.1| ornithine decarboxylase [Azospirillum sp. B510] gi|288910593|dbj|BAI72082.1| ornithine decarboxylase [Azospirillum sp. B510] Length = 427 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 106/368 (28%), Gaps = 27/368 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMD-GTTS 57 P + I L + D+ L A G +L A+KC + L Sbjct: 46 PMHCIRPGVLADTADSFLAAFTEAADAVGRGGDVLYAVKCNPEPAVLRALWAGGVRHFDV 105 Query: 58 SSLYEVMLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 +S E+ L + F Y + + ++ +L K +++ Sbjct: 106 ASPGEIRLIRQMFPDAVLHYMHPVKGRQAIRNAYHQYGVRDFVLDSQEELTKILEESGNA 165 Query: 115 HKKIG-LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173 +R+ + + L+ + + V GL FH + Sbjct: 166 ADLGLVIRLALPKGNAVYDLSGKFGASLTDAVELLRAARAVAPKV-GLSFHVGSQMLDPS 224 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-------YPVKDFCQRLKEFSEKYS 226 + + I+ + +GGG + + + + Sbjct: 225 AYERAIALAGYVIAESGVAIDMLDVGGGFPVSYPGVTPPPLGDFMAAIARGVASIDLPSH 284 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEAHVPDYLLYQESAT 280 +++ EPG A+V +L V+ + + V L + Sbjct: 285 CRLWCEPGRALVAPGVSLVVQVVKRRGDELFINDGVYGALSDAGVPGFRFPARLIRPFEA 344 Query: 281 IYPNTGPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + + G G +C + D G F VK GD I + Y + FNG + Sbjct: 345 M-GDNGEAAFSFYGPTCDSADKMAGPFILPADVKAGDWIELGQLGAYGSCLRTAFNGFDQ 403 Query: 340 PTIAVKNV 347 + + Sbjct: 404 ARVVEVSD 411 >gi|66045783|ref|YP_235624.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae B728a] gi|63256490|gb|AAY37586.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae B728a] Length = 397 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 106/356 (29%), Gaps = 34/356 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64 +Y +D + + N +L A+K + + L+Q +SL EV Sbjct: 42 FYTVDPRWITQNAQQFSGCFPGT---VLYAMKANPLVHVLEALSQGGINHFDVASLAEVQ 98 Query: 65 LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 H K + + ++ +L+K +D + I + Sbjct: 99 TVHNTLPNAVQYLMNPVKSRHCLHEAYYRHGVRSFVLDSEEELSKLRDVLPERDSTISMF 158 Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S S + L + ++ + GL FH + + A L Sbjct: 159 VRYAPSESTAVYDLRGKFGASPALATQLVHQVAASTDWSLGLSFHVGSQAIEDGPWLAAL 218 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233 + + + + +GGG + C+ ++ + + E Sbjct: 219 DDADAIVRDTAQHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCEHIQTSPTLKDLNLICEA 278 Query: 234 GEAIVTNTTTLNTTVLDISENIKNL-----------VIVDSSVEAHVPDYLLYQESATIY 282 G +V +L VL E+ D Y Sbjct: 279 GRGLVYGGMSLFARVLSRREHSVFCGAGIFGGLLSAQQWLQFPARVWRDAAPYA------ 332 Query: 283 PNTGPYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + T + G +C + D + ++ GD + F+ Y+++ + FNG Sbjct: 333 -GSAEATFNIFGPTCDSMDRLAFPYSLASDIREGDWLEFQSTGAYSVSLRTPFNGF 387 >gi|254375053|ref|ZP_04990533.1| hypothetical protein FTDG_01241 [Francisella novicida GA99-3548] gi|151572771|gb|EDN38425.1| hypothetical protein FTDG_01241 [Francisella novicida GA99-3548] Length = 416 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 57/385 (14%), Positives = 123/385 (31%), Gaps = 34/385 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P ++ID+ LL + ++K + + + S Sbjct: 28 SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 E + D + L I + ++ + A+KL+ K Sbjct: 88 EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173 IGLR+ + + + + + + GL H + Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDLQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207 Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218 + + E + +EWI LGGG+ + ++ + + Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267 Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271 ++Y + E G ++V + L TT V +N ++ + +P Sbjct: 268 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327 Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 Y+ + ++ G SC+ D + F ++ GD++ + V YNI+R Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR 355 N F P++ + + + + +R Sbjct: 388 NNEFI-HLKPSVILIDKNQQYQVLR 411 >gi|290991901|ref|XP_002678573.1| ornithine decarboxylase [Naegleria gruberi] gi|284092186|gb|EFC45829.1| ornithine decarboxylase [Naegleria gruberi] Length = 543 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 52/425 (12%), Positives = 117/425 (27%), Gaps = 94/425 (22%) Query: 6 YYLIDKQKLLNNLDTALYIR------------KNAGVKLLLALKCFAAWGMFDTLNQYMD 53 ++++D ++ ++ + GV+ A+KC + L Sbjct: 111 FFVVDLSHIVRQIERWRKAMTIYPKDQQKIEIDDRGVRPFYAVKCNPNENIVKVLYMMGC 170 Query: 54 GTTSSSLYEVMLGHEK-----------------------------------FGGETHAYN 78 G +S E+ L E G + Sbjct: 171 GFDCASEAEIALVCETCKEVDTWLENNQQFYESLTIVNPDPSLEQIKNRRFVPGRDIIFA 230 Query: 79 VAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136 K + ++V ++ K + + I ++ + S + F Sbjct: 231 HPCKQISHMEYAAKVGVELTTLDSVCEIEKIAEHWKAAKCVIRIKTDDSHATVGFSAKFG 290 Query: 137 NRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQI 193 F + +K ++ N+ G+ FH + L++ + + ++ Sbjct: 291 CSKFGQ--TILLEKAKALGVNIYGISFHVGTNCSDTNSYKKALQDAAELAKLAIKYGYKL 348 Query: 194 EWISLGGGIHFTDKDYPVKDFCQ------------------RLKEFSEKYSVQIYLEPGE 235 I +GGG D + + ++++ EPG Sbjct: 349 SLIDIGGGFMGRINDENPMETVASQIVPEIQKLFLRDESTNADDSIIDPKTIKLIAEPGR 408 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY--------------QESATI 281 IV+ + TL V + + + D++ Y + Sbjct: 409 YIVSASHTLVCNVHTVKDMRLENEQLKKEGIPTPDDFIYYLNDGIYGSFNNIVFDYVHLV 468 Query: 282 YP--------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + Y + + G +C + D + + GD + F + Y + Sbjct: 469 VNMIMSKSTKHEKKYASTLFGPTCDSLDCLSRGYPLPELHAGDYLFFNNFGAYTTAAASD 528 Query: 334 FNGIN 338 FNG+ Sbjct: 529 FNGMR 533 >gi|332678981|gb|AEE88110.1| Diaminopimelate decarboxylase [Francisella cf. novicida Fx1] Length = 417 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 57/385 (14%), Positives = 123/385 (31%), Gaps = 34/385 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P ++ID+ LL + ++K + + + S Sbjct: 28 SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 E + D + L I + ++ + A+KL+ K Sbjct: 88 EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173 IGLR+ + + + + + + GL H + Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDLQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207 Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218 + + E + +EWI LGGG+ + ++ + + Sbjct: 208 RFTAMAKNIGELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267 Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271 ++Y + E G ++V + L TT V +N ++ + +P Sbjct: 268 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327 Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 Y+ + ++ G SC+ D + F ++ GD++ + V YNI+R Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR 355 N F P++ + + + + +R Sbjct: 388 NNEFI-HLKPSVILIDKNQQYQVLR 411 >gi|242045460|ref|XP_002460601.1| hypothetical protein SORBIDRAFT_02g031650 [Sorghum bicolor] gi|241923978|gb|EER97122.1| hypothetical protein SORBIDRAFT_02g031650 [Sorghum bicolor] Length = 426 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 113/362 (31%), Gaps = 28/362 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +K+ + +++ +++ K GV A+KC + L G +S Sbjct: 51 VKSAFSVLNLGEVVELFAAWRRGLK--GVPPYYAVKCNTNPALLGALAALGAGFDCASPA 108 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + Y K D F++V +++K + + + Sbjct: 109 EMDAVLALGVTADRIIYANPCKPEAHIEHAARVGVDLTTFDSVEEVDKLRRFHPRCRLLL 168 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 L++ + +++ L +S V+G+ FH + A Sbjct: 169 RLKVPDAGDAARWDLGTKYGARQEEVAPLLRAAQSAGLAVSGVAFHVGSAVSRVGVYDAA 228 Query: 179 LKNIEKEFG----HFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 ++ F + + + +GGG T +D + F + +Q+ Sbjct: 229 VEAARAVFDAAAARGMPPMRILDIGGGFMAGAASTFQDACDVINSALTRHFGDVPGLQVI 288 Query: 231 LEPGEAIVTNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLLYQESA 279 EPG TL V I + + + +A Sbjct: 289 GEPGRYFAETPFTLAARVFGKRARGEVREYWIDDGFYGTLCCVHVENYVPRPVPVSSRAA 348 Query: 280 TIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 G + + V G +C + D+ + + ++IGD + F +V Y FN Sbjct: 349 AGDDEGGESDETHPSTVFGPTCDSLDVVVKGYHLPELRIGDWLVFHEVGAYTTVLSCNFN 408 Query: 336 GI 337 G Sbjct: 409 GF 410 >gi|289811717|ref|ZP_06542346.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 330 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 95/326 (29%), Gaps = 36/326 (11%) Query: 72 GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSK 130 + + D A +S + +V L + + ++ LR+NP + Sbjct: 4 PDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRVWLRVNPGFGHGH 61 Query: 131 FILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + S+ G D + + G+ H + + Sbjct: 62 SQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQ 121 Query: 185 EFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-KYSVQIYLEPG 234 +E IS GGG+ Y R + ++V++ +EPG Sbjct: 122 VL-ECGQDVEAISAGGGLSIPYHEGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPG 180 Query: 235 EAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--------ATIYPNT 285 +V + L T V + ++ V+VD+ + + N Sbjct: 181 RYLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENG 240 Query: 286 GPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 +V G C +GD+F E V GD + D Y + + +N Sbjct: 241 PWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRP 300 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 + + + R + + Sbjct: 301 LLPEVLFDNGQARLIRRRQTIEELLA 326 >gi|237709819|ref|ZP_04540300.1| carboxynorspermidine decarboxylase [Bacteroides sp. 9_1_42FAA] gi|229455912|gb|EEO61633.1| carboxynorspermidine decarboxylase [Bacteroides sp. 9_1_42FAA] Length = 212 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 3/204 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + +P Y++D+ L NL + AGV+++LA K FA W F +Y+ TT+SS+Y Sbjct: 7 VPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFSVFREYIRYTTASSVY 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119 E L +E+FG + H Y+ AY D + ++ I FN+ SQ +F KA G Sbjct: 67 EARLAYEEFGSKAHTYSPAYTDTDFPVIMQCSSHITFNSFSQFRRFYPMVKASGEKISCG 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RINP S + L +P P +R G E+ + + G H +CE+ S+ L Sbjct: 127 IRINPEYSEVEVELYNPCAPGTRFGVTADLLPETLPEGIEGFHCHCHCESSSYE-LEHTL 185 Query: 180 KNIEKEFGHFITQIEWISLGGGIH 203 ++IE+ F + QI+ + G G Sbjct: 186 QHIEETFARWFPQIKMVEFGRGAP 209 >gi|145579900|pdb|2NV9|A Chain A, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579901|pdb|2NV9|B Chain B, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579902|pdb|2NV9|C Chain C, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579903|pdb|2NV9|D Chain D, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579904|pdb|2NV9|E Chain E, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579905|pdb|2NV9|F Chain F, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579906|pdb|2NV9|G Chain G, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579907|pdb|2NV9|H Chain H, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Length = 372 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 111/359 (30%), Gaps = 40/359 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ + + + +D + V A+KC + T+ +S E+ Sbjct: 19 FYVSSPKIVEDLIDQWTILFPR--VTPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKK 76 Query: 66 GHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + K D I A D F++ +L+K + K+ LRI Sbjct: 77 VIQIGVSPSRIIFAHTMKTIDDLIFAKDQGVDIATFDSSFELDKIHT--YHPNCKMILRI 134 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + L + + + V G+ FH +++ + +K+ Sbjct: 135 RCDDPNAAVQLGNKFGANEDEIRHLLEYAKQLDIEVIGISFHVGSGSRNPEAYYRAIKSS 194 Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEKYSVQIYLEPG 234 ++ F + + +GGG+H + Y +K+F + +V I EPG Sbjct: 195 KEAFNEAISVGHKPYILDIGGGLHADIDEGELSTYMSDYINDAIKDFFPEDTVTIVAEPG 254 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA----------------HVPDYLLYQES 278 + + L T V+ + + D +E Sbjct: 255 RFFAEHYSVLATQVIGKRVRDGLYEYFFNESTYGGFSNVIFEKSVPTPQLLRDVPDDEEY 314 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 +++ G +C D+ + IGD + F Y FNG Sbjct: 315 ---------VPSVLYGCTCDGVDVINHNVALPELHIGDWVYFPSWGAYTNVLTTSFNGF 364 >gi|26353042|dbj|BAC40151.1| unnamed protein product [Mus musculus] Length = 448 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 110/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC + + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQTVVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E + K + I +++ K + K+ L I Sbjct: 98 VQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + + L + Sbjct: 158 EDNIGGEDGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKEYQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 F G F + + +GGG T+ ++ F E +QI EPG V Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSGIQIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVEGCLLPELNVGDWLIFDNMGADSFHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYFMMS 408 >gi|1702874|emb|CAA64451.1| ornithine decarboxylase [Candida albicans] Length = 470 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 59/382 (15%), Positives = 119/382 (31%), Gaps = 53/382 (13%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D +++N+++ V+ A+KC + + TL++ +S E+ L Sbjct: 77 FFVCDLGEIINSVNQWQQSL--PMVQPYYAVKCNSNPQILTTLSELGVNFDCASKNEIDL 134 Query: 66 GHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E Y K +N + + + +K H KI +R+ Sbjct: 135 VLSLGIHQAHERIIYANPCKTNSFIRHAANENVNLTTVDNVHELYKLAKFHPHCKILIRL 194 Query: 123 NPSVSYSKFILADPNRPF--SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 S ++ L+ + +GE + V+G+ FH K F +K Sbjct: 195 ITDDSTAQCQLSTKFGCDLNTAIGEILPKA-KELSLQVHGVAFHVGSGAKDFSSIYQAIK 253 Query: 181 NIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLE 232 + F + + +GGG + L++F + ++ E Sbjct: 254 DSRILFDEMLSMGFTPKLLDIGGGFERETFPQSSQMVKFALEKFFPIEFSQSNEIKFIAE 313 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------------------AHVPDY 272 PG +V N TL T ++ + ++ + H Sbjct: 314 PGRFMVANAFTLITHIIARRDLPTGGNNHNNDMTPSAMLYINDGVYGNLNCILFDHQTPK 373 Query: 273 LLYQESATIYPNTGP----------------YTAMVCGRSCLAGDIFGEFHFEKP-VKIG 315 + + + + G +C D V++G Sbjct: 374 VYVLTNENQLFYKQEMMRSLSVNNNNNKTDGFKFSIWGPTCDGLDCVSSLAKLSKNVQVG 433 Query: 316 DRISFEDVAGYNINRKNWFNGI 337 D + FE+V Y FNG+ Sbjct: 434 DWLFFENVGAYTSCASTKFNGL 455 >gi|291542522|emb|CBL15632.1| Diaminopimelate decarboxylase [Ruminococcus bromii L2-63] Length = 392 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 66/384 (17%), Positives = 129/384 (33%), Gaps = 36/384 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KT +Y+ D + L + + + V + A+K + L +D S E Sbjct: 9 KTAFYVFDVKTLKDRVAYLRKMLPE-DVAICYAIKANTF--ITAELENDVDRFEICSPGE 65 Query: 63 VMLG-HEKFGGETHAYNVAYKDC----EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 + + + YK + A +++Q N F++ ++K KK Sbjct: 66 AEICDLLDIPDKMMVISGVYKTPEVMKNMVANGKCDRIFTVESLTQFNLFRELSEKYKKK 125 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 I L + + + E + E E ++ G+ F + + S Sbjct: 126 ISLLLRL------TNGSQFGINSDEIEEIISKRNEFEYLDILGIQFFSGTQKTSLKKLKR 179 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-----KYSVQ 228 + ++ + E + G G T + + + F++ + Sbjct: 180 EIDKLDNLLILLKEKYDYTAEELEYGTGFPATYFKEDTINEDELIGGFAQLLNEMTSKPK 239 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284 I LE G +I T ++D N ++ H+ Q A P Sbjct: 240 ITLELGRSIAAICGKYYTHIVDKKCNKGENYLLVDGGMNHI--VYYGQHMAMKQPYLSVC 297 Query: 285 -----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGIN 338 + +CG C DI + ++IGD I FE+ Y + + F + Sbjct: 298 GKETEPCTESWNICGSLCSMNDIIAKQISLPDIEIGDVICFENTGAYCMTEGISLFLSRD 357 Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362 +P++ +K DGT +R S+ + Sbjct: 358 IPSVYIKKEDGTYLCVR-DSFETF 380 >gi|9055298|ref|NP_061215.1| antizyme inhibitor 1 [Mus musculus] gi|156255200|ref|NP_001095928.1| antizyme inhibitor 1 [Mus musculus] gi|13431735|sp|O35484|AZIN1_MOUSE RecName: Full=Antizyme inhibitor 1; Short=AZI; AltName: Full=Ornithine decarboxylase antizyme inhibitor gi|183448303|pdb|3BTN|A Chain A, Crystal Structure Of Antizyme Inhibitor, An Ornithine Decarboxylase Homologous Protein gi|183448304|pdb|3BTN|B Chain B, Crystal Structure Of Antizyme Inhibitor, An Ornithine Decarboxylase Homologous Protein gi|2645701|gb|AAB87464.1| antizyme inhibitor [Mus musculus] gi|26340414|dbj|BAC33870.1| unnamed protein product [Mus musculus] gi|26353728|dbj|BAC40494.1| unnamed protein product [Mus musculus] gi|27882604|gb|AAH43722.1| Antizyme inhibitor 1 [Mus musculus] gi|148676850|gb|EDL08797.1| antizyme inhibitor 1 [Mus musculus] Length = 448 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 110/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC + + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQTVVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E + K + I +++ K + K+ L I Sbjct: 98 VQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + + L + Sbjct: 158 EDNIGGEDGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKEYQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 F G F + + +GGG T+ ++ F E +QI EPG V Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSGIQIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYFMMS 408 >gi|149964|gb|AAA25361.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis str. Erdman] Length = 446 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 103/353 (29%), Gaps = 44/353 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + +G + A K F + +++ + E Sbjct: 39 GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 97 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + K AV + I+ ++++++ + A + + Sbjct: 98 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 157 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE---------KCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ + GL H + Sbjct: 158 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 217 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + G F + I + LGGG+ + L Sbjct: 218 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 277 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + ++ +EPG AI T V + + + Sbjct: 278 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 337 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV 312 + ++ L + + + P A + G+ C +GDI + + Sbjct: 338 GMSDNIRTGLYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPTI 390 >gi|66474038|gb|AAY46598.1| BCG hsp60-lysA chimera [Shuttle vector pCB112-Edim6] gi|66474042|gb|AAY46601.1| hsp60-lysA chimera [Shuttle vector pCB119-Edim6] gi|77632628|gb|ABB00292.1| BCG hsp60-lysA chimaera [Shuttle vector pCB112-HPV11-L1] Length = 455 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 103/353 (29%), Gaps = 44/353 (12%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + +G + A K F + +++ + E Sbjct: 48 GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 106 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + F E + K AV + I+ ++++++ + A + + Sbjct: 107 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 166 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE---------KCKDKIESEIKNVNGLMFHNNCE 168 + +R+ V + G + ++ + GL H + Sbjct: 167 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 226 Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 F + G F + I + LGGG+ + L Sbjct: 227 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 286 Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264 + ++ +EPG AI T V + + + Sbjct: 287 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 346 Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV 312 + ++ L + + + P A + G+ C +GDI + + Sbjct: 347 GMSDNIRTGLYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPTI 399 >gi|22507525|gb|AAH19412.1| Antizyme inhibitor 1 [Mus musculus] Length = 448 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 110/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC + + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQTVVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E + K + I +++ K + K+ L I Sbjct: 98 VQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + + L + Sbjct: 158 EDNIGGEDGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKEYQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 F G F + + +GGG T+ ++ F E +QI EPG V Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSGIQIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYFMMS 408 >gi|123410961|ref|XP_001303794.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] gi|121885199|gb|EAX90864.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] Length = 398 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 56/373 (15%), Positives = 120/373 (32%), Gaps = 27/373 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 T +L D ++ + +K A+KC + L + G +S E Sbjct: 30 DTAIWLADMNRVRYCANLWEAYL--PKIKAHYAMKCCDEPNLLKFLADHGFGFDCASKKE 87 Query: 63 VMLGHE--KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + + + ++ K+ E A + ++F+T +L K ++ Sbjct: 88 IEVITQDLGVDANRIVFSHPLKNKEAILYAKEVGVERMVFDTEEELRKI--LRFYPEAEV 145 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE---NKSFLCF 175 LR+ P S +K L+ N G FH + +F Sbjct: 146 YLRVKPKFSNAKIPLSKKYGAPPEDVPNLLQLASELGANFIGFSFHVGSQCDDINTFRQV 205 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQI 229 + ++ + + +I +GGG + + EF + ++ Sbjct: 206 FQYVAELKVKAEELGLNVCFIDIGGGFYPPHAPANNSFKEITETINNAIDEFFGENEIEF 265 Query: 230 YLEPGEAIVTNTTTLNTTV----------LDISENIKNLVIVDSSVEAHVPDYLLYQESA 279 EPG + L V + +++I + + + + D+ Sbjct: 266 VGEPGRFFASEYMDLILPVTCAKIHEDDHGERTQSIYIPDGIYGAFNSIIYDHNNPHFEI 325 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 ++ + G++C + DI E +++GD + + Y + +FNG + Sbjct: 326 HTEGDSEKLPTTIWGQTCDSADIVYEDMMWPELEVGDLLIVRRFSAYTYSPTAFFNGFHH 385 Query: 340 PTIAVKNVDGTIK 352 + V N D Sbjct: 386 HPVVVLNKDEDDI 398 >gi|260905831|ref|ZP_05914153.1| diaminopimelate decarboxylase [Brevibacterium linens BL2] Length = 497 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 57/396 (14%), Positives = 106/396 (26%), Gaps = 42/396 (10%) Query: 3 KTPYY-LIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP LID + A V +A K + + + G +S Sbjct: 74 GTPVIGLIDLDHIAETYALLTSAFSGAADVLHAVACKAVPLQPLLRSYAEAGAGCEVASP 133 Query: 61 YEVMLGH-EKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116 E+ L F E + + A E+ + ++ + +L + Sbjct: 134 GELELALSAGFSPEAIVFDSPAKTWTELRRAVDLGVSMNIDNFDELERLDVLLTGHTTSA 193 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 ++G+RINP S+ G D IE+ + H + ++ Sbjct: 194 RVGIRINPQSGTGTIGALSTATQTSKFGIGLADPGARDELIEAYLSRPWLNQIHVHSGSQ 253 Query: 171 SFL----------CFSAMLKNIEKEFGHFITQ--IEWISLGGGIHFTDKDYPVKDFCQRL 218 + E I I +GGG+ + Sbjct: 254 GISLDQAAAGIETVVDLAKEVNELAAQKHGRDRQITRIDIGGGLPVNFSGEEITPTFAEY 313 Query: 219 KEFSEK-----YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDY 272 + E + + E G A++ T T V + + + + V+ Sbjct: 314 RAVLEARVPELFDFDLVTEFGRALLAKAGTTLTHVEYAKTTGGRRIAMTHAGVQVATRTA 373 Query: 273 LLYQESATIYPNTGPY---------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + P V G +C AGD+ + GD ++ D Sbjct: 374 YAPADWPLRILPFTPEGNPKTAEVVPTDVAGPACFAGDLLVRDRMLPRLDAGDIVAVPDT 433 Query: 324 AGYNINRKNWFNGINMPTIAVKN---VDGTIKAIRE 356 Y + +N + + IR Sbjct: 434 GAYYFSNPFSYNLLPRVPVYGYRVQAETVEFSIIRR 469 >gi|16506287|ref|NP_443724.1| arginine decarboxylase [Homo sapiens] gi|24636807|sp|Q96A70|ADC_HUMAN RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC; AltName: Full=ODC-paralogue; Short=ODC-p; AltName: Full=Ornithine decarboxylase-like protein gi|14714623|gb|AAH10449.1| ADC protein [Homo sapiens] gi|15858863|gb|AAL08049.1| ornithine decarboxylase-like protein variant 1 [Homo sapiens] gi|24081047|gb|AAH28128.1| Arginine decarboxylase [Homo sapiens] gi|56202451|emb|CAI19354.1| arginine decarboxylase [Homo sapiens] gi|119627877|gb|EAX07472.1| arginine decarboxylase, isoform CRA_d [Homo sapiens] gi|119627886|gb|EAX07481.1| arginine decarboxylase, isoform CRA_d [Homo sapiens] gi|123982478|gb|ABM82980.1| arginine decarboxylase [synthetic construct] gi|123997145|gb|ABM86174.1| arginine decarboxylase [synthetic construct] gi|189055058|dbj|BAG38042.1| unnamed protein product [Homo sapiens] Length = 460 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 118/362 (32%), Gaps = 37/362 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L Q G + ++ E+ L Sbjct: 41 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H K + + + +++ K K+ L I Sbjct: 99 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 159 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG T+ + + F E V I+ E G Sbjct: 219 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 278 Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272 VT+ T+ +++ + I +S + ++ Sbjct: 279 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPT 338 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + Q+ + Y++ + G + D E + + +GD + F+++ Y + + Sbjct: 339 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 396 Query: 333 WF 334 F Sbjct: 397 PF 398 >gi|208780272|ref|ZP_03247614.1| diaminopimelate decarboxylase [Francisella novicida FTG] gi|208743921|gb|EDZ90223.1| diaminopimelate decarboxylase [Francisella novicida FTG] Length = 416 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 56/386 (14%), Positives = 120/386 (31%), Gaps = 36/386 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P ++ID+ LL + ++K + + + S Sbjct: 28 SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + D + L I + ++ + A+KL+ Sbjct: 88 EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147 Query: 120 LRINP-------SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 + + + S F L D + + GL H + Sbjct: 148 IGLRIADNKTPQNWSRFGFALTDQQNNSDIF-TTIDKIQQIANIQLAGLHCHIGTNIRDI 206 Query: 173 L----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQR 217 + + E + +EWI LGGG+ + ++ + Sbjct: 207 SRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAAT 266 Query: 218 LKEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVP 270 + ++Y + E G ++V + L TT V +N ++ + +P Sbjct: 267 IIAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIP 326 Query: 271 DYLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 Y+ + ++ G SC+ D + F ++ GD++ + V YNI+ Sbjct: 327 TISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNIS 386 Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIR 355 R N F P++ + + + + +R Sbjct: 387 RNNEFI-HLKPSVILIDKNQQYQVLR 411 >gi|329941101|ref|ZP_08290380.1| decarboxylase [Streptomyces griseoaurantiacus M045] gi|329299632|gb|EGG43531.1| decarboxylase [Streptomyces griseoaurantiacus M045] Length = 472 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 57/387 (14%), Positives = 104/387 (26%), Gaps = 40/387 (10%) Query: 8 LIDKQKLLNNLDTALYIRK-----NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 L+D + N + V A+K + L G +S E Sbjct: 58 LLDVTGIRNAAAELRAAFEAVLPPGTPVLHAFAVKASPLVPVVRLLRAAGIGAEVASAGE 117 Query: 63 VMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KI 118 + L E + A E+ L+ + + +L + + + Sbjct: 118 LALARAAGVPPERTVLDSPAKTPAELREALALGIAVNADNPQELARIDALVRSAPTRSPL 177 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCE-- 168 G+R+NP V S+ G +D +E + L H + Sbjct: 178 GVRVNPQVGGGSIGALSTATTTSKFGVALRDAGAREWLLRAYAERPWLTRLHAHVGSQGI 237 Query: 169 --NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + E+ Q++ + +GGG+ R + Sbjct: 238 PPALMVRGLGEVYALAEEINRRAGRRQVDTLDIGGGLPVDFGSDASAPTYARYARLLAEA 297 Query: 226 -------SVQIYLEPGEAIVTNTTTLNTTVLDIS---------ENIKNLVIVDSSVEAHV 269 + E G +++ TL V + V + H Sbjct: 298 VPGLMDGRYGLVTEFGRSLLAKHGTLVARVEYTKAAGGRAVAVTHAGVQVATRTVYAPHA 357 Query: 270 PDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + P GP V G +C AGD+ E + GD ++ D Y+ Sbjct: 358 WPLRIAAYDTEGRPKEGPPVVQDVAGPACFAGDLLAEGRPLPELAPGDVVAAPDTGAYSF 417 Query: 329 NRKNWFNGINMPTIA-VKNVDGTIKAI 354 +N + + DG Sbjct: 418 AHHYAYNSLPRVGVYGYVAEDGADGVR 444 >gi|85373776|ref|YP_457838.1| diaminopimelate/ornithine decarboxylase [Erythrobacter litoralis HTCC2594] gi|84786859|gb|ABC63041.1| diaminopimelate/ornithine decarboxylase [Erythrobacter litoralis HTCC2594] Length = 400 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 87/350 (24%), Gaps = 21/350 (6%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77 A + + K+L A+K + + L +S+ EV L + + Sbjct: 30 RAARFFVEKFPGKVLYAVKANPSPDLLQILRASGVTHYDVASIAEVRLVRDALPDAVLCF 89 Query: 78 NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG---------LRINPSVSY 128 K A + + ++ + + G +RI S Y Sbjct: 90 MHPVKTPRAIAEAYHQHGVRTFSLDTEEELAKIVEACSDAQGNPAKDLKLCVRIRVSSDY 149 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188 S+ LA + G+ FH + + + ++ + Sbjct: 150 SELSLASKFGCDLTEAPALLQLARQHCDWL-GVCFHVGSQAMTPFAYVQAIERVRAAIAD 208 Query: 189 FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 I+ I +GGG + + E L Sbjct: 209 ASVVIDMIDVGGGFPSVYPGMEPPPLEDYFAIIHKHFEALPIAYNAELWCEPGRALCAEY 268 Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---------TGPYTAMVCGRSCLA 299 ++ + + + L G +C Sbjct: 269 SSLTVRVDKRRGEELYINDGAYGALYDAAHVGWKFPVRALEDDLIKPDMPFAFYGPTCDD 328 Query: 300 GDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 D G F+ + ++ GD I + Y K FNG V + Sbjct: 329 ADYMEGPFNLPEDIQAGDYIEVGMLGAYGAAMKTGFNGFGNAEQIVVEDE 378 >gi|254293193|ref|YP_003059216.1| Orn/DAP/Arg decarboxylase 2 [Hirschia baltica ATCC 49814] gi|254041724|gb|ACT58519.1| Orn/DAP/Arg decarboxylase 2 [Hirschia baltica ATCC 49814] Length = 403 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 111/353 (31%), Gaps = 23/353 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61 ++P + +++ +L A+K + D + + +SL Sbjct: 17 ESPVACVRPERVSTAAAWFQNHFPG---DVLYAVKANPSPWALDAMYEAGMRWFDVASLE 73 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ L +F AY K + + ++L K + A K + Sbjct: 74 EIELVANRFDDAVLAYMHPIKSRNSIERAYFDYGVRIFVLDCEAELQKILE-ATDFAKDL 132 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176 L + +VS + F G+ +++ + G+ FH + + Sbjct: 133 TLVVRMAVSNDG-ASMPLSGKFGCFGDDAAHLLQAARSYADELGVSFHVGSQCMDPGAYR 191 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEKYSVQI---- 229 + + ++ + +GGG + + + + E+ V Sbjct: 192 IAMDTVSNTIVQAAVTVDIVDVGGGFPALYPGMQPPELQSYIDVINQVFEEMPVLFNADL 251 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKN----LVIVDSSVEAHVPDYLLYQESATIYPNT 285 + EPG A+V ++T++ V + + + + + + Sbjct: 252 WCEPGRALVADSTSIVAKVELVRDGRVYLNDGAYGNLFDAAHCKWPFPMEVHRVSGKTSI 311 Query: 286 GPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C + D+ G F ++ GD I F + Y FNG Sbjct: 312 HSKPFTIYGPTCDSIDVLDGVFDLPADIQEGDYIEFGMMGAYGTAMSTRFNGF 364 >gi|254373586|ref|ZP_04989072.1| hypothetical protein FTCG_01683 [Francisella tularensis subsp. novicida GA99-3549] gi|151571310|gb|EDN36964.1| hypothetical protein FTCG_01683 [Francisella novicida GA99-3549] Length = 416 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 57/385 (14%), Positives = 123/385 (31%), Gaps = 34/385 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P ++ID+ LL + ++K + + + S Sbjct: 28 SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFCEVGFIPEVVSSD 87 Query: 62 EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 E + D + L I + ++ + A+KL+ K Sbjct: 88 EFEQIQTLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173 IGLR+ + + + + + + GL H + Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDQQNNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207 Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218 + + E + +EWI LGGG+ + ++ + + Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267 Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271 ++Y + E G ++V + L TT V +N ++ + +P Sbjct: 268 IAPLKEYLNKTNNKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327 Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 Y+ + ++ G SC+ D + F ++ GD++ + V YNI+R Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387 Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR 355 N F P++ + + + + +R Sbjct: 388 NNEFI-HLKPSVILIDKNQQYQVLR 411 >gi|302185892|ref|ZP_07262565.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae 642] Length = 371 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 103/356 (28%), Gaps = 34/356 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64 +Y +D + N +L A+K + + L+Q +SL EV Sbjct: 16 FYTVDTHWITRNAQQFSGCFPGT---VLYAMKANPLPQVLEALSQGGINHFDVASLAEVQ 72 Query: 65 LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 H K + + ++ +L K +D + I L Sbjct: 73 TVHNTLPNAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELLKLRDVLPERDSTISLF 132 Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S S + L + ++ S GL FH + + A L Sbjct: 133 VRYAPSESTAVYDLRGKFGASPALATQLVHQVASSTDWSLGLSFHVGSQAIEEGPWLAAL 192 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233 + + + + +GGG + C+ ++ + + E Sbjct: 193 DDADAIVRDTAQHVRHLDIGGGFPGNYLNSMGNTTDLVGRVCEHIQTSPTLKDLNLICEA 252 Query: 234 GEAIVTNTTTLNTTVLDISENIKNL-----------VIVDSSVEAHVPDYLLYQESATIY 282 G +V +L VL E+ D Y Sbjct: 253 GRGLVYGGMSLFARVLSRREHSVFCGAGIFGGLLSAQQWLQFPARVWRDAAPY------- 305 Query: 283 PNTGPYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T + G +C + D + ++ GD + F+ Y+++ + FNG Sbjct: 306 TGAAENTFNIFGPTCDSMDRLAFPYTLASDIREGDWLEFQSTGAYSVSLRTPFNGF 361 >gi|157952582|ref|YP_001497474.1| hypothetical protein NY2A_B278R [Paramecium bursaria Chlorella virus NY2A] gi|155122809|gb|ABT14677.1| hypothetical protein NY2A_B278R [Paramecium bursaria Chlorella virus NY2A] Length = 372 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 110/350 (31%), Gaps = 22/350 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ + + N +D + V A+KC + T+ +S YE+ Sbjct: 19 FYVSSPKIVENLIDQWNILFPR--VTPHYAVKCNNDDVLLKTMCDKNVNFDCASSYEIKK 76 Query: 66 GHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + K + I A D F++ +L+K + K+ LRI Sbjct: 77 VMRLGVDPSRIIFAHTMKSIEDLIFAKDQGVDIATFDSSFELDKIHE--FHPRCKMILRI 134 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + L + E + ++ V G+ FH +++ + +K Sbjct: 135 RCDDPNATVQLGNKFGANEDEVEHLLEYAKNLNIEVVGISFHVGSGSRNPEAYYRAIKAS 194 Query: 183 EKEFG---HFITQIEWISLGGGIH-----FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + F + +GGG+H Y + + +F ++ I EPG Sbjct: 195 KDAFDTAISVGHTPYILDIGGGLHADIDEDEISTYMSEYINDAINDFFPDDTITIIAEPG 254 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-------HVPDYLLYQESATIYPNTGP 287 + ++L T V+ + + + + Sbjct: 255 RFFAEHYSSLATQVIGKRVRDGLYEYFFNESTYAGFSNVIFEKSVPIPKLVRHVPDEEEY 314 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 +++ G +C D+ + + +GD + F+ Y FNG Sbjct: 315 VPSVLYGCTCDGIDVINQNIALPEMNVGDWVVFDSWGAYTNVLVTSFNGF 364 >gi|145640803|ref|ZP_01796385.1| diaminopimelate decarboxylase [Haemophilus influenzae R3021] gi|145274317|gb|EDK14181.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.4-21] Length = 265 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 67/237 (28%), Gaps = 15/237 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170 I LR+NP V ++ G + E + G+ H + Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205 Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 F + ++ ++ + LGGG+ T D EK Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEK 262 >gi|83310200|ref|YP_420464.1| diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1] gi|82945041|dbj|BAE49905.1| Diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1] Length = 400 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 87/337 (25%), Gaps = 21/337 (6%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVMLGHEKFG-GETHA 76 A + ++L A+KC + L G ++S+ EV L F H Sbjct: 46 REAARFVDSFPGQVLYAVKCNPDEAVLRALAAGGIGHFDAASIAEVRLVRRLFPEAGIHF 105 Query: 77 YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136 + I F K A+ I D Sbjct: 106 MHPVKARSAIREAYGLHGVRDFVLDGAGELDKIVAETEGASDLRLIVRLGLAKGDARLDL 165 Query: 137 NRPFSRLGEKCKDKIESE-IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEW 195 + F + + GL FH + + L + Q++ Sbjct: 166 SGKFGASADDAVRLLRRCAAVGRVGLSFHVGSQCCDPSAWERALAQADAVIRAAAIQLDV 225 Query: 196 ISLGGGIHFTDKDYPVKDFCQR-------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 + +GGG + ++ EPG A+V +L V Sbjct: 226 LDVGGGFPVAYPGMRPPPLAAFMAAIRRGVARMGLPSGCVLWCEPGRALVAGCQSL---V 282 Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-------YTAMVCGRSCLAGD 301 + + +++ ++ V + D G +C + D Sbjct: 283 VQVQARRGDMLFINDGVYGTLSDAGALAWRYPCRLIKAAGASHETLQAFGFFGPTCDSLD 342 Query: 302 IF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 G F GD I + Y + FNG Sbjct: 343 RMPGPFLLPADTAEGDWIEIGQLGAYGACLRTGFNGF 379 >gi|330971195|gb|EGH71261.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 371 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 106/356 (29%), Gaps = 34/356 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64 +Y +D + + N +L A+K + + L+Q +SL EV Sbjct: 16 FYTVDPRWITQNAQQFSGGFPGT---VLYAMKANPLVHVLEALSQGGINHFDVASLAEVQ 72 Query: 65 LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 H K + + ++ +L+K +D + I + Sbjct: 73 TVHNTLPNAVQYLMNPVKSRHCLHEAYYRHGVRSFVLDSEEELSKLRDVLPERDSTISMF 132 Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S S + L + ++ + GL FH + + A L Sbjct: 133 VRYAPSESTAVYDLRGKFGASPALATQLVHQVAASTDWSLGLSFHVGSQAIEDGPWLAAL 192 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233 + + + + +GGG + C+ ++ + + E Sbjct: 193 DDADAIVRDTAQHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCEHIQTSPTLKDLNLICEA 252 Query: 234 GEAIVTNTTTLNTTVLDISENIKNL-----------VIVDSSVEAHVPDYLLYQESATIY 282 G +V +L VL E+ D Y Sbjct: 253 GRGLVYGGMSLFARVLSRREHSVFCGAGIFGGLLSAQQWLQFPARVWRDAAPYS------ 306 Query: 283 PNTGPYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + T + G +C + D + ++ GD + F+ Y+++ + FNG Sbjct: 307 -GSAETTFNIFGPTCDSMDRLAFPYTLASDIREGDWLEFQSTGAYSVSLRTPFNGF 361 >gi|312377940|gb|EFR24646.1| hypothetical protein AND_10628 [Anopheles darlingi] Length = 397 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 104/360 (28%), Gaps = 29/360 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P L+D +++ N + G+ A + + + G + +S E+ Sbjct: 28 PINLLDLDRIVQNYQRWTEQQHGTGLLPYYAPSVNNHPTVLALMARLGVGFSCASEEEMC 87 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + K E A + ++ ++ ++++K + +R Sbjct: 88 TALSLGVPPGRIRFVHPVKTVESILFAKQHHIKRLVVDSETEIDKVYRHYPDGQLLLRIR 147 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 ++ K+ L + I+ V + + Sbjct: 148 LSR---EQKYGCCPRGDAPGILAHAKANGIQVAGLYVAIPAPNQHQVEALQRGLEQAKAV 204 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 E+ +T I +++ G + P + ++ +E V + Sbjct: 205 YEQACALGLTDIRELAIAGA-----ETIPSSALASAIANLELPATISCVIETERQFVESA 259 Query: 242 TTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM--------- 291 TL T+V + V + + D P T T Sbjct: 260 VTLVTSVQSKRIVRDPDQPEVIREIMYFINDGRYGSFEWWTTPVTKEPTVYRTNGARQPL 319 Query: 292 --------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 V G +C + D+ E + IGD + F DV Y + FNG +P + Sbjct: 320 PAQVWPSSVWGPTCDSADVVFEKVNLPELDIGDFLVFADVGAYGGTLASQFNGCPLPRMI 379 >gi|291449262|ref|ZP_06588652.1| decarboxylase [Streptomyces roseosporus NRRL 15998] gi|291352209|gb|EFE79113.1| decarboxylase [Streptomyces roseosporus NRRL 15998] Length = 464 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 105/369 (28%), Gaps = 34/369 (9%) Query: 9 IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 ID + + ++ GV A K + + L G +S E+ L Sbjct: 54 IDTEGVRASVGALHDAFAATPGVLHTFAAKACSLIPVLRLLAGCGMGCEVASPGELRLAL 113 Query: 68 E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI-GLRINP 124 E F + A EI L+ + +++++L + + GLRINP Sbjct: 114 EAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLAELRRIDALRNPSTTSVLGLRINP 173 Query: 125 SVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFS 176 V S+ G +D + E + L H + + Sbjct: 174 QVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVGSQGCPLELIA 233 Query: 177 AMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFSEK 224 A + + QI + +GGG+ D Sbjct: 234 AGVARTYELAEEINGTLGVRQITSLDIGGGLPVNFADETVRPTYADYVAALTAAAPGLFS 293 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYL---LY 275 + E G +++ + V + + ++ +PD + Sbjct: 294 GHYALVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLRIG 353 Query: 276 QESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P GP A + G C AGD+ + D + D Y + + Sbjct: 354 AFGPDGVPKGGPVLAQDIAGPCCFAGDVVAYGRELPELAEDDVVVLYDTGAYYFSTPWAY 413 Query: 335 NGINMPTIA 343 N + P + Sbjct: 414 NSLPRPAVY 422 >gi|239992274|ref|ZP_04712938.1| putative decarboxylase [Streptomyces roseosporus NRRL 11379] Length = 454 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 105/369 (28%), Gaps = 34/369 (9%) Query: 9 IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 ID + + ++ GV A K + + L G +S E+ L Sbjct: 44 IDTEGVRASVGALHDAFAATPGVLHTFAAKACSLIPVLRLLAGCGMGCEVASPGELRLAL 103 Query: 68 E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI-GLRINP 124 E F + A EI L+ + +++++L + + GLRINP Sbjct: 104 EAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLAELRRIDALRNPSTTSVLGLRINP 163 Query: 125 SVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFS 176 V S+ G +D + E + L H + + Sbjct: 164 QVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVGSQGCPLELIA 223 Query: 177 AMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFSEK 224 A + + QI + +GGG+ D Sbjct: 224 AGVARTYELAEEINGTLGVRQITSLDIGGGLPVNFADETVRPTYADYVAALTAAAPGLFS 283 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYL---LY 275 + E G +++ + V + + ++ +PD + Sbjct: 284 GHYALVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLRIG 343 Query: 276 QESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P GP A + G C AGD+ + D + D Y + + Sbjct: 344 AFGPDGVPKGGPVLAQDIAGPCCFAGDVVAYGRELPELAEDDVVVLYDTGAYYFSTPWAY 403 Query: 335 NGINMPTIA 343 N + P + Sbjct: 404 NSLPRPAVY 412 >gi|239945803|ref|ZP_04697740.1| putative decarboxylase [Streptomyces roseosporus NRRL 15998] Length = 434 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 105/369 (28%), Gaps = 34/369 (9%) Query: 9 IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 ID + + ++ GV A K + + L G +S E+ L Sbjct: 24 IDTEGVRASVGALHDAFAATPGVLHTFAAKACSLIPVLRLLAGCGMGCEVASPGELRLAL 83 Query: 68 E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI-GLRINP 124 E F + A EI L+ + +++++L + + GLRINP Sbjct: 84 EAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLAELRRIDALRNPSTTSVLGLRINP 143 Query: 125 SVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFS 176 V S+ G +D + E + L H + + Sbjct: 144 QVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVGSQGCPLELIA 203 Query: 177 AMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFSEK 224 A + + QI + +GGG+ D Sbjct: 204 AGVARTYELAEEINGTLGVRQITSLDIGGGLPVNFADETVRPTYADYVAALTAAAPGLFS 263 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYL---LY 275 + E G +++ + V + + ++ +PD + Sbjct: 264 GHYALVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLRIG 323 Query: 276 QESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 P GP A + G C AGD+ + D + D Y + + Sbjct: 324 AFGPDGVPKGGPVLAQDIAGPCCFAGDVVAYGRELPELAEDDVVVLYDTGAYYFSTPWAY 383 Query: 335 NGINMPTIA 343 N + P + Sbjct: 384 NSLPRPAVY 392 >gi|225719632|gb|ACO15662.1| Diaminopimelate decarboxylase [Caligus clemensi] Length = 445 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 58/397 (14%), Positives = 121/397 (30%), Gaps = 50/397 (12%) Query: 8 LIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D + + + L + G ++ A+K G+ G +S+ EV+L Sbjct: 24 IFDLDYFNSRITSLLKAFPSDGQNLQHTFAVKANPLRGVLLAAKARGLGAECASISEVLL 83 Query: 66 GHE-KFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK----LHKKIG 119 F + + +I L++ + + ++ + Q+ +G Sbjct: 84 SLSLGFEPCKVIFDSPCKTREDIRIALNSGVVMNLDNEREMGLVHEILQEGNVKDRPLVG 143 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSF 172 LRINP V F + S+ G + + E +NG+ H + Sbjct: 144 LRINPVVGGGDFDILSTATKASKFGLPLCENTKERILSLFEECGWLNGVHIHVGSQGVPL 203 Query: 173 LCFSAMLKNIEKEFGHF-----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 F K + + +E + +GGG+ + V+ + E+ Sbjct: 204 KKFVDGAKKLMEFVHKIESCRGGRLLETVDIGGGLSTSYILEDVEPKEFTFALYKEELSK 263 Query: 226 --------SVQIYLEPGEAIVTNTTTLNTTVLDIS---ENIKNLVIVDSSVEAHVPDYLL 274 ++ E G ++ T V I I+ ++ V + + L Sbjct: 264 AVPELFDGRRRVITEFGRSLALKAGKTLTRVEHIKEWIPEIRPIIQTHVGVNQFIRETYL 323 Query: 275 YQESATIYP------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 + + G C GD GD ++ D Sbjct: 324 PDTWSHRISLLNPLGNTKTCAPENKVLYDIAGPLCFQGDYLQSSVSLPSATPGDVLAIHD 383 Query: 323 VAGYNINRKNWFNGINMPTIAV----KNVDGTIKAIR 355 Y ++ + +N I P++ N + + +R Sbjct: 384 TGAYTMSMYSRYNSI-RPSVVYGYERINEEEKDQCLR 419 >gi|295110384|emb|CBL24337.1| Diaminopimelate decarboxylase [Ruminococcus obeum A2-162] Length = 399 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 52/381 (13%), Positives = 117/381 (30%), Gaps = 36/381 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+ D ++ + ++ A+K + + + + S Sbjct: 16 IPTPAYVFDLDEMKEFAEKVKRCLTG-KAEICYAMKANPF--LIKPMLEIVSSLEVCSPG 72 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVL----SNCDTIIFNTVSQLNKFKDKAQKLHK 116 E + + YK+ + A + N T ++ L D A + Sbjct: 73 EFRICERAGIPMGKIVLSGVYKNPDDIAYMLDRYGNSGTYTVESLQHLKVLNDTAVRHGI 132 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + + I + + + ++ + + G+ F++ + ++ Sbjct: 133 ILSVLIRV------TSGNQFGIDEAEIRKIISEREKYAGIEIEGIQFYSGTQKRNLSQMQ 186 Query: 177 AMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------YS 226 L++++ +I + G G + + L E +K + Sbjct: 187 EELEHLDAFIRDLEDINGMEIRTLEYGPGFFVPYFVKDKSERTEDLLEEFKKILEALQFH 246 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV----------PDYLLYQ 276 +I LE G + + T+++D+ N + + H+ Y Sbjct: 247 GKIVLEMGRFLAASCGYYITSIVDMKVNKEQPYAILDGGINHLNYYGQAMAMKRPYCSQL 306 Query: 277 ESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWF 334 S G +CG C D+ + + +I D + FE V Y++ F Sbjct: 307 NSKGSEKTEGKEENWNLCGALCTVSDVIVKQFPLRNPEICDILVFERVGAYSVTEGIYLF 366 Query: 335 NGINMPTIAVKNVDGTIKAIR 355 +P I + +R Sbjct: 367 LSRPLPKIYFWTQADGLCLVR 387 >gi|34147969|gb|AAQ62560.1| arginine decarboxylase [Homo sapiens] Length = 460 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 117/362 (32%), Gaps = 37/362 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L Q G + ++ E+ L Sbjct: 41 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H K + + + +++ K K+ L I Sbjct: 99 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 159 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGG T+ + + F E V I+ E G Sbjct: 219 VFEMGTELGHKMHVLDLGGXFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 278 Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272 VT+ T+ +++ + I +S + ++ Sbjct: 279 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPT 338 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + Q+ + Y++ + G + D E + + +GD + F+++ Y + + Sbjct: 339 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 396 Query: 333 WF 334 F Sbjct: 397 PF 398 >gi|290983144|ref|XP_002674289.1| ornithine decarboxylase [Naegleria gruberi] gi|284087878|gb|EFC41545.1| ornithine decarboxylase [Naegleria gruberi] Length = 536 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 57/404 (14%), Positives = 114/404 (28%), Gaps = 76/404 (18%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++++D ++ ++ A+KC + + G +SL E+ L Sbjct: 126 FHIVDLSHVIRQVERWRLCFPRIN--PYYAVKCNPNESIIKVMYMMGCGFDCASLNEIKL 183 Query: 66 -------GHEKFGGETHAY-------NVAYKDCEIDAVLSNCDTI--------------- 96 E F H Y NV + + D I Sbjct: 184 VTQLCNEVDEWFAKHPHFYEVLAFVNNVTVEQVMSKKFCTTTDIIFANPCKQLSHVRYAR 243 Query: 97 -------IFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD 149 ++ ++ K + + + I ++ + S S F + G Sbjct: 244 DNGLQWTTIDSPQEVEKLARQWKDVKGVIRIKTDDSNSACAFSSKFGVSIENARGIF--Q 301 Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD 206 + + G+ FH + + +K+ F + + +GGG Sbjct: 302 SAKDNNVELCGVSFHVGSGCQDVNAYVKAVKDARIIFDMAEEYGYSFNLLDIGGGFLGNI 361 Query: 207 KD----YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 K+ V + L + V++ EPG I + L + + + + Sbjct: 362 KETPTVEDVASNVRDLIDDLFPSHVKVISEPGRFIAQAVSVLVVNIFSKKDLREENKLYY 421 Query: 263 SSVEA-------HVPDYLLY----------------QESATIYPNT------GPYTAMVC 293 +E H D +Y T Y + Sbjct: 422 KQLEESGASDIVHDRDDFIYYLNDGIYGSFNNIYFDHAEPTFKTIKTAEEKGAKYKSTCF 481 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 G +C + DI + + + GD + F + Y + FNG Sbjct: 482 GPTCDSIDITCKGYLLPELNEGDFLYFTNFGAYTTASSSQFNGF 525 >gi|238879425|gb|EEQ43063.1| ornithine decarboxylase [Candida albicans WO-1] Length = 473 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 59/385 (15%), Positives = 119/385 (30%), Gaps = 56/385 (14%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D +++N+++ V+ A+KC + + TL++ +S E+ L Sbjct: 77 FFVCDLGEIINSVNQWQQSL--PMVQPYYAVKCNSNPQILTTLSELGVNFDCASKNEIDL 134 Query: 66 GHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E Y K +N + + + +K H KI +R+ Sbjct: 135 VLSLGIHQAHERIIYANPCKTNSFIRHAANENVNLTTVDNVHELYKLAKFHPHCKILIRL 194 Query: 123 NPSVSYSKFILADPNRPF--SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 S ++ L+ + +GE + V+G+ FH K F +K Sbjct: 195 ITDDSTAQCQLSTKFGCDLNTAIGEILPKA-KELGLQVHGVAFHVGSGAKDFSSIYQAIK 253 Query: 181 NIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLE 232 + F + + +GGG + L++F + ++ E Sbjct: 254 DSRILFDEMLSMGFTPKLLDIGGGFERETFPQSSQMVKFALEKFFPIEFSQSNEIKFIAE 313 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------------------AHVPDY 272 PG +V N TL T ++ + ++ + H Sbjct: 314 PGRFMVANAFTLITHIIARRDLPTGGNNHNNDMTPSAMLYINDGVYGNLNCILFDHQTPK 373 Query: 273 LLYQESATIYPNTGP-------------------YTAMVCGRSCLAGDIFGEFHFEKP-V 312 + + + + G +C D V Sbjct: 374 VYVLTNENQLFYKQEMMRSLSVNNNNNNNNKTDGFKFSIWGPTCDGLDCVSSLAKLSKNV 433 Query: 313 KIGDRISFEDVAGYNINRKNWFNGI 337 ++GD + FE+V Y FNG+ Sbjct: 434 QVGDWLFFENVGAYTSCASTKFNGL 458 >gi|145628394|ref|ZP_01784195.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.1-21] gi|144980169|gb|EDJ89828.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.1-21] Length = 220 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 13/214 (6%) Query: 161 LMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----KDYPVKD 213 + H + F + ++ ++ + LGGG+ T +P Sbjct: 1 MDCHIGSQLTELQPFLDAADRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDY 60 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDY 272 L++ ++I LEPG AI N L V + +N I D+ + + Sbjct: 61 ANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPA 120 Query: 273 LLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 L I + V G C D G+ + GD I+ Y Sbjct: 121 LYEAYMNIIEIDRTLAREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGA 179 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + + +N + + D + R + + Sbjct: 180 SMSSNYNSRPRTAEVLVDGDQSYLIRRRETLQEL 213 >gi|145593239|ref|YP_001157536.1| Orn/DAP/Arg decarboxylase 2 [Salinispora tropica CNB-440] gi|145302576|gb|ABP53158.1| diaminopimelate decarboxylase [Salinispora tropica CNB-440] Length = 416 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 56/390 (14%), Positives = 104/390 (26%), Gaps = 39/390 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y D +L + +L +LK + L S E Sbjct: 15 QTPAYFYDLDELTRSNAALRAALPRP-TELFYSLKANPHPTVVAELTAAGCRAEVCSPGE 73 Query: 63 VMLGHEKF--GGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + +D + +AV + + ++ L++ A++ ++ Sbjct: 74 LRVALAAGCDPAQVLYTGPGKRDIDLAEAVRAGVELFSVDSPYGLDQLDRMAREHDVEVR 133 Query: 120 LRINPSVSYS-------KFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKS 171 + + +A R D G + Sbjct: 134 ALVRINDDTPAPGQGLTMTGVASQFGADVRWVLDQPDLFGPRRNVCPVGFHLYMGSNVDG 193 Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----------YPVKDFCQ 216 F+ + I + Q E I LGGG + Sbjct: 194 EDALIAQFTQSVDTIRRLVAATGRQPELIDLGGGFGAPFARAGARPDLPKLADRLAALLA 253 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276 + + E G +V TL T VL++ + V+V S H+ + Sbjct: 254 DAFPGWPEQGPAVAFESGRYLVGTCGTLVTRVLEVKRSQGIPVVVLESGIHHLGGMSGLR 313 Query: 277 ESATIYPNTGPYTA---------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 I P+ A +V G C D + P+ G ++ +V Y Sbjct: 314 RLPPIVPDLLTVDAAAGPPIPGTIVTGPLCTPLDTWARATALPPLVPGQLVAVPNVGAYG 373 Query: 328 INRKNW--FNGINMPTIAVKNVDGTIKAIR 355 + + F MP R Sbjct: 374 L-YASLVAFLAHPMPIEVTIAGGQVTSVTR 402 >gi|260437083|ref|ZP_05790899.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein [Butyrivibrio crossotus DSM 2876] gi|292810392|gb|EFF69597.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein [Butyrivibrio crossotus DSM 2876] Length = 391 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 47/376 (12%), Positives = 108/376 (28%), Gaps = 33/376 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ D L + I + + A+K + + + Y+D S E Sbjct: 14 GSPSYIFDLDALKERVLNIKKILGK-DINICYAMKANPF--IIEEMKDYIDRYEVCSPGE 70 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV----LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 + + + K E + + + ++ + Sbjct: 71 YEICQRHSVKKDVIIVSGVNKTYESMERIMSLCNGDGIFTIESAEHYDILSKVCKEKNIH 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK---SFLC 174 I + I ++E + G+ +++ + K Sbjct: 131 IRVVIRL------TSGNQFGIDKDMFKNILLQLKDNEYLDFAGIHYYSGTQKKLKKVIKE 184 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIY 230 + + + ++ + + + G G+ F + + LK+ + + Sbjct: 185 VAMLEEFAKELQDEYGVATDILEYGPGLLFNYFEGEETPSFGEQLSELKDILKNIKSFKH 244 Query: 231 L--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--LLYQESATIYPNTG 286 + E G I + T V+D N + + + Y L + + T Sbjct: 245 ITLEMGRFIASECGYYCTEVVDRKCNNGSEYAIVDGGIHQINYYGQTLGMKKPFMDVITC 304 Query: 287 PYTA-----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN--RKNWFNGINM 339 + +CG C D+ + GD + F++ Y+I F + Sbjct: 305 NNSYELQKINICGSLCTVNDVILRDVSLPQLDKGDILIFKNCGAYSITEGMA-LFLSREL 363 Query: 340 PTIAVKNVDGTIKAIR 355 P + N D +R Sbjct: 364 PAVIFYNKDTGFVRVR 379 >gi|156371417|ref|XP_001628760.1| predicted protein [Nematostella vectensis] gi|156215745|gb|EDO36697.1| predicted protein [Nematostella vectensis] Length = 446 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 57/400 (14%), Positives = 128/400 (32%), Gaps = 46/400 (11%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 D + N+D G +A+K + D +N+ G +S+ EV+ + Sbjct: 39 YDLDEFEANVDRVTEAFGQ-GCLHAIAVKANPVPALLDLVNKKGQGAECASIGEVLNALK 97 Query: 69 -KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK---KIGLRIN 123 F E Y + E+ ++ + + +L + ++L IGLRIN Sbjct: 98 VGFPAERIVYDSPVKTRPELKFLMEQGVHLNVDNFQELQVITELMKELKNVKSTIGLRIN 157 Query: 124 PSVSYSKFILADPNRPFSRLGEKC-----KDKIES--EIKNVNGLMFHNNCENKSFLC-- 174 P + + S+ + I + +N + H ++ Sbjct: 158 PVMDAGDIKALSVSCTDSKFAVALTESTRDEIIGWFVDRPWMNCVHVHVGSQSYGVEGLS 217 Query: 175 --FSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231 + Q+E I +GGG+ +D + Q +K Q++ Sbjct: 218 EGARRAVDLALAVNKKVGRNQVEIIDIGGGMGVNREDDSISPTYQDYVNALKKAVPQLFP 277 Query: 232 ----------EPGEAIVTNTTTLNTTVLDISENIKNLVI--------VDSSVEAHVPDYL 273 E G+++ T + + V + ++ + P Sbjct: 278 DQGVFKQLVTEFGQSLNAKTGFIVSRVEYTKKVPESDHTIALIHAGADMCLRSCYCPQVA 337 Query: 274 LYQESATIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 Y+ ++ + G + G C AGD+ + ++ GD + D + Sbjct: 338 KYKRRVQVFDSNGKPKTGQEKLHNIAGPLCFAGDVVRKEVMLPQIERGDYVILHDCGANS 397 Query: 328 INRKNWFNGINMPTI--AVKNVDG-TIKAIRE-FSYNDYY 363 + + P++ D + ++E ++++ + Sbjct: 398 LATFSRHCSRFAPSVFGYRVKDDQVEFQVLKEAETFDELF 437 >gi|321254369|ref|XP_003193051.1| ornithine decarboxylase [Cryptococcus gattii WM276] gi|317459520|gb|ADV21264.1| ornithine decarboxylase, putative [Cryptococcus gattii WM276] Length = 527 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 59/413 (14%), Positives = 115/413 (27%), Gaps = 66/413 (15%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D + + + V++ A+KC + + L+ +S E+ Sbjct: 106 FFAADLSAVYQAVQMWRASPIGSRVEIFYAVKCNPSPAVLHLLSLMGTSFDCASSSEINQ 165 Query: 66 GH---EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 G+ + K A + F+ V +L K K + + Sbjct: 166 VLSLPSAPSGDRIIFANPCKPASFIRTAAQRGVSMMTFDNVDELYKVKRICPNAKLVLRM 225 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + S S + L S G NV G+ FH K + F+ + Sbjct: 226 LTDDSKSLCRLGLKFGAPVDSCPG--LLKVARQLGLNVVGVSFHVGSGCKDPMQFADAVW 283 Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEA 236 K F + + +GGG + + E V+I EPG Sbjct: 284 RARKVFDMGKEAGYDFDLLDIGGGFERETFAEMTQVLKDSFDLYFPEDSGVRIIAEPGRF 343 Query: 237 IVTNTTTLNTTVLDISE-----------------------NIKNLVIVDSSVEAHVPDYL 273 +V++ TL T+++ V S + D+ Sbjct: 344 LVSSAFTLATSIIASRRAPKAEASQQAQAATQEDTKSADVMYYINDGVYGSFNCIMFDHQ 403 Query: 274 LYQESATIYPNTGP---------------------------YTAMVCGRSCLAGDIFGEF 306 + + V G +C + D + Sbjct: 404 IVHPHPLTIGHKLATAAPPFPPPPNVQLEVDLPVQMGYKDVEKVSVWGPTCDSIDCVRQL 463 Query: 307 HFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK---AIR 355 + +GD I + ++ Y + + FNG + + G + +R Sbjct: 464 VDLPKGMDVGDWIGWGEMGAYTLCAASTFNGFDRSP-VLWTTGGDTEDARVVR 515 >gi|302551918|ref|ZP_07304260.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM 40736] gi|302469536|gb|EFL32629.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM 40736] Length = 475 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 106/388 (27%), Gaps = 39/388 (10%) Query: 8 LIDKQKLLNNLDTALYIRK-----NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 L+D + + V A+K + L + G +S E Sbjct: 65 LLDVTGIRESAAELRAAFDAVVAPGTPVLHAFAVKATPLVPVLRLLREEGVGAEVASPGE 124 Query: 63 VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKI 118 + L T + A E+ L+ + + +L + + Sbjct: 125 LALARAAGVEPAMTVLDSPAKTPAELREALALGIAVNADNPQELERIDGLMSSAASRSPL 184 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCE-- 168 G+R+NP V S+ G +D+ E + L H + Sbjct: 185 GIRVNPQVGGGSIEATSTATATSKFGVALRDEGAREWVVQACLDRPWLTRLHAHTGSQGI 244 Query: 169 --NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + + E+ QI+ + +GGG+ + + Sbjct: 245 PLSLMARGVAETYALAEEINRRAGRRQIDTLDIGGGLPVNFASDATTPTYAQYARVLAEE 304 Query: 226 -------SVQIYLEPGEAIVTNTTTLNTTVLDIS---------ENIKNLVIVDSSVEAHV 269 + E G +++ T+ V + V + Sbjct: 305 VPGLFDGRYGLVTEFGRSLLAKHGTVVARVEYAKSSGGRAVAVTHAGVQVAARTVYAPGS 364 Query: 270 PDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + A GP V G +C +GD+ E ++ GD + D Y Sbjct: 365 WPLRIAAYDAKGRVKDGPVVVQDVAGPACFSGDLLAEGRSMPELEQGDYAAALDTGAYYF 424 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE 356 +N + P + DG +RE Sbjct: 425 AHHYAYNSLARPGVYGFWPDGRFAVVRE 452 >gi|18916739|dbj|BAB85531.1| KIAA1945 protein [Homo sapiens] Length = 420 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 118/362 (32%), Gaps = 37/362 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L Q G + ++ E+ L Sbjct: 46 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 103 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H K + + + +++ K K+ L I Sbjct: 104 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 163 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 164 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 223 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG T+ + + F E V I+ E G Sbjct: 224 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 283 Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272 VT+ T+ +++ + I +S + ++ Sbjct: 284 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPT 343 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + Q+ + Y++ + G + D E + + +GD + F+++ Y + + Sbjct: 344 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 401 Query: 333 WF 334 F Sbjct: 402 PF 403 >gi|158254464|dbj|BAF83205.1| unnamed protein product [Homo sapiens] Length = 448 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC +A + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G + + +GGG + V L F E V+I EPG V Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLGIYFPEGSGVKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYYMMS 408 >gi|30583931|gb|AAP36214.1| Homo sapiens ornithine decarboxylase antizyme inhibitor [synthetic construct] gi|60653891|gb|AAX29638.1| ornithine decarboxylase antizyme inhibitor [synthetic construct] Length = 449 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC +A + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G + + +GGG + V L F E V+I EPG V Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYYMMS 408 >gi|221124530|ref|XP_002167271.1| PREDICTED: similar to Ornithine decarboxylase, partial [Hydra magnipapillata] Length = 296 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 93/319 (29%), Gaps = 33/319 (10%) Query: 36 LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSN 92 +K + L + +S E+ + + + + A N Sbjct: 1 VKSNPNPVVIALLARLGVNFDCASKCEIETVLDLGVNPDRIIFANPCKQESHVKYANTKN 60 Query: 93 CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 + F++ + +K K ++ LRI S S F L +K + Sbjct: 61 VRKMTFDS--EGELYKVKENFPGAELVLRIKVDDSKSTFKLGRKFGASLETTQKLLQLAK 118 Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY 209 NV G+ FH F +K+ F + +GGG Sbjct: 119 DLDLNVIGVSFHVGTGCYDAALFYNAVKSAADVFQQGDNIGFTFTLLDIGGGFPGF---- 174 Query: 210 PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269 + + V + +N + + ++ V Sbjct: 175 -----------------KDETISMENFTLCCNVISVKEVSNNDKNEQFMYYLNDGVYTSF 217 Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 D L ++ + + + G +C + D E + + + D + F+++ Sbjct: 218 KDVLFGKKFIPFLLQESSTSLLFKSSLWGPTCDSTDCISEEIYLPKLSVQDLLYFKNMGA 277 Query: 326 YNINRKNWFNGINMPTIAV 344 Y+ + FNG N P I Sbjct: 278 YSTCFASKFNGFNPPVIYY 296 >gi|114568928|ref|YP_755608.1| ornithine decarboxylase [Maricaulis maris MCS10] gi|114339390|gb|ABI64670.1| Ornithine decarboxylase [Maricaulis maris MCS10] Length = 417 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 41/367 (11%), Positives = 92/367 (25%), Gaps = 24/367 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 +++P + ++ ++L A+K A + L++ +S+ Sbjct: 16 VESPVVCVRPDRVAEAGRWFQDNFPG---EVLYAVKANPAPWILQALHKAGTRFFDVASI 72 Query: 61 YEVMLGHEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ L E A+ + I IF + K + H Sbjct: 73 PEIQLVAEHCPDSRMAFLHPVKSRESIRRAYYEFGVRIFALDCEAELAKILEETNHADDV 132 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + F + + I + + G+ FH + + + Sbjct: 133 TLVVRLAVSNDGAMFSLAGKFGAPAYEAAELIRTARAHAFELGVSFHVGSQCMQPSAYRS 192 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 + + ++ + +GGG + + + + LE + Sbjct: 193 AMLEASRLIAQAGVTVDIVDVGGGFPSIYPGMQPPPMDDYVAAIEDAFEEMMVLENADLW 252 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN------------- 284 L + ++ + L A Sbjct: 253 CEPGRALVAEAESVLTRVELRKGDALYLNDGAYGRLFDAAHAKWPFPVRLHRRRSTGPRD 312 Query: 285 ---TGPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + G +C + D G F ++ GD I + Y FNG Sbjct: 313 ESSEQTASFRFFGPTCDSLDAIPGPFELPADIREGDVIEIGMLGAYGTALATDFNGFGTI 372 Query: 341 TIAVKNV 347 Sbjct: 373 ERVAVED 379 >gi|145345663|ref|XP_001417323.1| Ornithine decarboxylase [Ostreococcus lucimarinus CCE9901] gi|144577550|gb|ABO95616.1| Ornithine decarboxylase [Ostreococcus lucimarinus CCE9901] Length = 547 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 59/368 (16%), Positives = 104/368 (28%), Gaps = 40/368 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 ++D + D K V+ A+KC G+ TL G +S EV L Sbjct: 140 IVDLATVKALYD-YHKA-KLPRVRPHFAVKCLPDRGIISTLAALGAGFDCASQGEVELVT 197 Query: 68 E-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126 E K ++ + S K A K+ K+ LRI Sbjct: 198 GLGVPSERIILAHPVKRPCDLRCIAEYEVPYTTFDSVSELHKILASKVKVKLILRIRADD 257 Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 ++ L + +V G+ FH +++ + ++ K F Sbjct: 258 PMARLPLGAKYGAPLDKVSELLSVAALLNLDVAGVSFHVGSSSRNPDAYRNAIQFARKIF 317 Query: 187 ---GHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFSEKYSV--------QIYL 231 + + +GGG + R+++ ++ QI Sbjct: 318 DEAKEIGFNMHLLDIGGGFTGSFDANGNVTEAPSNFDRVRDALDEIFPDDGTFEGLQIID 377 Query: 232 EPGEAIVTNTTTLNTTV----------LDISENIKNLVIVDSSVEAHVPDYLLYQES--- 278 EPG T+ V + + + S + D L Sbjct: 378 EPGRYFAQAPVTMACLVYGTREGTNDAGERHMDYYITDGLYGSFNGIIYDGLDLPTYFLQ 437 Query: 279 ---------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 + ++ V G +C + D + GD + F D Y + Sbjct: 438 PNKVAPLAGIDNDFDKIKISSTVYGPTCDSLDCVMRNIPLPELSNGDWLMFPDAGAYTMA 497 Query: 330 RKNWFNGI 337 FNGI Sbjct: 498 GACDFNGI 505 >gi|209964659|ref|YP_002297574.1| lysine [Rhodospirillum centenum SW] gi|209958125|gb|ACI98761.1| lysine [Rhodospirillum centenum SW] Length = 395 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 59/367 (16%), Positives = 114/367 (31%), Gaps = 26/367 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P Y +L + +L A+KC + D L ++SL E+ Sbjct: 20 PVYCYRPDELTARARQFVSAFPG---HVLYAVKCNPEPLVLDALWAGGIRHFDTASLQEI 76 Query: 64 MLGHEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 L F + + + F + K A+ + + Sbjct: 77 ELVKGHFAAGGCYFMHPVKQRGAVRDAYERMGVRTFVVDHRDELEKVTAETGGARDVTVV 136 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIE-SEIKNVN-GLMFHNNCENKSFLCFSAMLK 180 + + D F E+ D + + + + GL FH + + ++A L+ Sbjct: 137 VRLATARGAAVYDLGGKFGCTVEQGADLLRTAAGRGLKVGLCFHVGSQCLNPGSYTAALR 196 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSE----KYSVQIYLEP 233 ++ I +GGG + P++D+ ++ E ++ EP Sbjct: 197 LAAACQDLAGAELAVIDVGGGFPTAYVGHEPPPLEDYMAAIRTGLETLRRPEGCAVWCEP 256 Query: 234 GEAIVTNTTTLNTTV-------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 G +V +L V L +++ + + H+P + + Sbjct: 257 GRGLVATGASLVVRVELRRDRHLYLNDGLYGSLCDLKFPGIHMP---MRAVRPGHAFSDE 313 Query: 287 PYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + G +C D G + ++ GD I Y + WFNG P AV+ Sbjct: 314 LVPFGLFGPTCDCYDQMPGPYMLPADIREGDWIEIGQCGAYTTATRTWFNGF-FPGRAVR 372 Query: 346 NVDGTIK 352 D Sbjct: 373 VDDSAFL 379 >gi|290959859|ref|YP_003491041.1| decarboxylase [Streptomyces scabiei 87.22] gi|260649385|emb|CBG72500.1| putative decarboxylase [Streptomyces scabiei 87.22] Length = 487 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 56/406 (13%), Positives = 114/406 (28%), Gaps = 44/406 (10%) Query: 3 KTPYY-LIDKQKLLNNLDTALYIRK-----NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP L+D + + V A+K + L + G Sbjct: 69 GTPVVALLDVNGIRASAGALRRAFDAVTAPGTPVLHAFAVKATPLVPVLRLLREAGIGAE 128 Query: 57 SSSLYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 +S E+ L T + A E+ L+ + + +L++ + Sbjct: 129 VASAGELALARAAGVSPRRTVLDSPAKTPAELREALALGIAVNADNPQELDRIDALVRSA 188 Query: 115 --HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFH 164 +G+R+NP V S+ G +D + + ++ L H Sbjct: 189 TTRSPVGIRVNPQVGSGAIGALSTATATSKFGVALRDEGAREWVVQAYLDRPWLSRLHAH 248 Query: 165 NNCE----NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLK 219 + + + + + E+ QI+ I +GGG+ ++ Sbjct: 249 SGSQGMPLSLMTRGITETYELAEEINRRIGRRQIDTIDIGGGLPVNFASEAATPTYEQYA 308 Query: 220 EFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDIS---------ENIKNLVIVDS 263 + + E G +++ ++ V + V + Sbjct: 309 RLLAEAVPGLFDGRYGLVTEFGRSLLAKHGSIVARVEYTKSAGGRAIAVTHAGVQVATRT 368 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 + A GP V G +C AGD+ E ++ GD + D Sbjct: 369 VYAPGSWPLRIAAYDAKGRVKNGPVAVQDVAGPACFAGDLLAEGRPLPLLEPGDYAAALD 428 Query: 323 VAGYNINRKNWFNGINMPTIAVK---NVDGTIKAIRE-FSYNDYYN 364 Y +N + P I + +R+ + Sbjct: 429 TGAYYFAHHYAYNSLPRPGIYGYAPGDGRTRFAVVRQAQTVEQIVA 474 >gi|2641952|dbj|BAA23593.1| antizyme inhibitor [Homo sapiens] Length = 448 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC +A + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G + + +GGG + V L F E V+I EPG V Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYYMMS 408 >gi|21361583|ref|NP_056962.2| antizyme inhibitor 1 [Homo sapiens] gi|22538418|ref|NP_680479.1| antizyme inhibitor 1 [Homo sapiens] gi|114621174|ref|XP_001154633.1| PREDICTED: ornithine decarboxylase antizyme inhibitor isoform 2 [Pan troglodytes] gi|114621176|ref|XP_001154692.1| PREDICTED: ornithine decarboxylase antizyme inhibitor isoform 3 [Pan troglodytes] gi|114621178|ref|XP_001154750.1| PREDICTED: antizyme inhibitor 1 isoform 4 [Pan troglodytes] gi|114621180|ref|XP_519894.2| PREDICTED: antizyme inhibitor 1 isoform 5 [Pan troglodytes] gi|33860187|sp|O14977|AZIN1_HUMAN RecName: Full=Antizyme inhibitor 1; Short=AZI; AltName: Full=Ornithine decarboxylase antizyme inhibitor gi|16807144|gb|AAH13420.1| Antizyme inhibitor 1 [Homo sapiens] gi|19483826|gb|AAH19279.1| Antizyme inhibitor 1 [Homo sapiens] gi|30582555|gb|AAP35504.1| ornithine decarboxylase antizyme inhibitor [Homo sapiens] gi|48145607|emb|CAG33026.1| OAZIN [Homo sapiens] gi|61362209|gb|AAX42178.1| ornithine decarboxylase antizyme inhibitor [synthetic construct] gi|61362216|gb|AAX42179.1| ornithine decarboxylase antizyme inhibitor [synthetic construct] gi|119612257|gb|EAW91851.1| antizyme inhibitor 1, isoform CRA_a [Homo sapiens] gi|119612259|gb|EAW91853.1| antizyme inhibitor 1, isoform CRA_a [Homo sapiens] gi|123979642|gb|ABM81650.1| antizyme inhibitor 1 [synthetic construct] gi|123982780|gb|ABM83131.1| antizyme inhibitor 1 [synthetic construct] gi|123982782|gb|ABM83132.1| antizyme inhibitor 1 [synthetic construct] gi|123997449|gb|ABM86326.1| antizyme inhibitor 1 [synthetic construct] Length = 448 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC +A + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G + + +GGG + V L F E V+I EPG V Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYYMMS 408 >gi|317055732|ref|YP_004104199.1| Orn/DAP/Arg decarboxylase 2 [Ruminococcus albus 7] gi|315448001|gb|ADU21565.1| Orn/DAP/Arg decarboxylase 2 [Ruminococcus albus 7] Length = 392 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 49/372 (13%), Positives = 102/372 (27%), Gaps = 32/372 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+ D + V L ++K + L + S Sbjct: 13 LGTPCYIFDTDVFAKRAAAVKNAFGDR-VGLCYSIKANPF--LLAALPEEFSYIEVCSPG 69 Query: 62 EVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + + + ++ K + A + + A K ++ Sbjct: 70 ELSICENVGAPLDKIIFSGVNKTGEDIARAYADGVAIFTAESRLHAELINECAVKNGGRV 129 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 L + + S L + + + + GL + + Sbjct: 130 KLILRLAHGSQ------FGMDKSDLLDIIDRREQFAGVEIIGLHYFTGTQKTKVKTIEKE 183 Query: 179 L----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFSEKYS 226 L + + + I G G+ + ++ F+EKY Sbjct: 184 LALLDELCAELENEHGYKPSHIEYGTGLAVEYYKDFTESTDIALLEEASAVIRPFAEKYP 243 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATI 281 + + E G + T ++DI ++ HV + I Sbjct: 244 LTV--EMGRFFAAECGSYLTKIMDIKTTNDLKYVICDGGINHVNYYGQNMAMKVPPIEVI 301 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMP 340 +CG C DI ++ GD I+F Y++ F +MP Sbjct: 302 EKTGEEKDYCLCGSLCTTADILVRKATLPTLERGDIIAFSKCGAYSVAEGIAAFLSRDMP 361 Query: 341 TIAVKNVDGTIK 352 +A+ + + Sbjct: 362 AVALFSEKDGLV 373 >gi|254420313|ref|ZP_05034037.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Brevundimonas sp. BAL3] gi|196186490|gb|EDX81466.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Brevundimonas sp. BAL3] Length = 399 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 90/343 (26%), Gaps = 19/343 (5%) Query: 23 YIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNVAY 81 + + N + A+K + + +TL + G +S+ E+ L A+ Sbjct: 12 WFQDNLKADVFYAVKANPSRWVIETLIEAGVRGFDVASIAEIELVRSVSHDVRLAFMHPV 71 Query: 82 KDCEIDAVLSNCDTIIFNTVSQLNKFKDK------AQKLHKKIGLRINPSVSYSKFILAD 135 K + ++ +++ A L+ + + ++ + Sbjct: 72 KSRSAITKAYFEHGVRTFSLDCVDELNKILDATGGADDLNLIVRMAVSADGAAYTLSGKF 131 Query: 136 PNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEW 195 ++ + G+ FH + + A + + + ++ Sbjct: 132 GVPADQAPALLLAT-RQAVKDGLMGVSFHVGSQCMRPTAYQAAMAQVGRSISRAGVIVDI 190 Query: 196 ISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + +GGG D + ++ E E + I + Sbjct: 191 VDVGGGFPSVYPGMVPPDMSEYADAIHRGFNEMPVSETTELWCEPGRAIVAESSSILARV 250 Query: 256 KNLVIVDSSVEA-----HVPDYLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIF-G 304 + T G G +C + D G Sbjct: 251 DLRKGDALYLNDGSYGSLFDATHSRWPFPTKLVRDGEAASELKAFQFYGPTCDSIDHMPG 310 Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 F ++ GD I + Y + FNG IA+ Sbjct: 311 PFWLPADIREGDFIEIGMLGAYGVAMSTGFNGYGEHDIAIVED 353 >gi|308803236|ref|XP_003078931.1| ornithine decarboxylase (ISS) [Ostreococcus tauri] gi|116057384|emb|CAL51811.1| ornithine decarboxylase (ISS) [Ostreococcus tauri] Length = 406 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 97/357 (27%), Gaps = 38/357 (10%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY 77 ++ K V+ A+KC G+ TL G +S EV L E Sbjct: 8 NSWRSTAKLPRVRPHFAVKCLPDKGIISTLAALGAGFDCASQGEVELVTSLGVPSERIIL 67 Query: 78 NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN 137 K ++ S K A ++ K+ LRI ++ L Sbjct: 68 AHPVKRPCDLRCIAEYQVPYTTFDSVSELHKILASQVDVKLVLRIRADDPMARLPLGAKY 127 Query: 138 RPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIE 194 + ++ G+ FH +++ + +K F ++ Sbjct: 128 GAPLDKVSELLSVAALLNLDIAGVSFHVGSSSRNPDAYRNAIKYARDIFDEATSMGFKMH 187 Query: 195 WISLGGGI----------HFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEAIVTNTT 242 + LGGG ++ + + +QI EPG Sbjct: 188 LLDLGGGFTGSFDANGNVSEAPSNFDRVREALDEIFPDDGTFEGLQIIDEPGRYFAQAPV 247 Query: 243 TLNTTV----------LDISENIKNLVIVDSSVEAHVPDYLLYQESA------------T 280 T+ V + + + S + D L Sbjct: 248 TMACLVYGKREGSNDNGERQLDYYITDGLYGSFNGIIYDGLDLPTYFLQPNKVAPLAGLE 307 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 ++ V G +C + D + GD + F D Y + FNGI Sbjct: 308 NEFEKTKISSTVYGPTCDSLDCVMRNVPLPELSNGDWLMFPDAGAYTMAGACDFNGI 364 >gi|329113279|ref|ZP_08242062.1| Lysine/ornithine decarboxylase [Acetobacter pomorum DM001] gi|326697420|gb|EGE49078.1| Lysine/ornithine decarboxylase [Acetobacter pomorum DM001] Length = 437 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 103/357 (28%), Gaps = 27/357 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++D + + ++ A+K A + L + ++S EV Sbjct: 77 TPCLVLDVDAVADRYHALGKAL--PQARIYYAVKANPAQPILRRLVELGSCFDAASWEEV 134 Query: 64 MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 L + ++ A + +F+ +L K A L Sbjct: 135 SLCLQAGASPDAISFGNTVKKVSAIRAAYEAGVRIFVFDCREELEKLAVHAPGSRVYCRL 194 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + +++ L+ ++ + GL FH + S + + Sbjct: 195 LV--DNYGAEWPLSRKFGTTVESAKELMLAARELGLDPYGLSFHVGSQQLSAEAYEVAIA 252 Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFC--QRLKEFSEKYSVQIYL 231 F + ++LGGG + + + E ++ + Sbjct: 253 RAAALFTDLSAAGLDLRMVNLGGGFPIRYRDDVPEIDHFTTAIFRAMTEHFGNALPEMLV 312 Query: 232 EPGEAIVTNTTTLNTTVLDI----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 EPG IV + + V+ + ++ V +D + + I + Sbjct: 313 EPGRFIVGEAGVVRSEVVLVSARGRKDGLRWVYLDIGRFGGLAETENESIRYAIRTSRDG 372 Query: 288 YT---AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINR-KNWFNGI 337 + G +C DI E + + G+++ Y FNG Sbjct: 373 SPTGRVALAGPTCDGADIMYEKTHYELPLDLAAGEQVDLLGAGAYVSTYCATGFNGF 429 >gi|83941446|ref|ZP_00953908.1| hypothetical protein EE36_04418 [Sulfitobacter sp. EE-36] gi|83847266|gb|EAP85141.1| hypothetical protein EE36_04418 [Sulfitobacter sp. EE-36] Length = 150 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 88/150 (58%), Positives = 113/150 (75%) Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 +K S+ Y VQ+YLEPGEA +T TL TTVLD N KNL IVDSS+EAH+ D L+Y+E Sbjct: 1 MKTLSDTYGVQVYLEPGEAAITGAATLETTVLDTLHNGKNLAIVDSSIEAHMLDLLIYRE 60 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 A + PNTG + M+CG+SCLAGDIFGEF F+ P+K GDRISF+D AGY + +KNWFNG+ Sbjct: 61 PAKVAPNTGDHDWMICGKSCLAGDIFGEFKFDAPLKPGDRISFQDAAGYTMVKKNWFNGV 120 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 MP IA++ +DGTI ++R F Y D+ + LS Sbjct: 121 KMPGIAIRELDGTITSVRSFDYEDFKSALS 150 >gi|332214026|ref|XP_003256127.1| PREDICTED: antizyme inhibitor 1 [Nomascus leucogenys] Length = 448 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC +A + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G + + +GGG + V L F E V+I EPG V Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYYMMS 408 >gi|295691122|ref|YP_003594815.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter segnis ATCC 21756] gi|295433025|gb|ADG12197.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter segnis ATCC 21756] Length = 419 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 94/336 (27%), Gaps = 18/336 (5%) Query: 20 TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYN 78 A + + + A+K + + L Q +SL EV L + G A+ Sbjct: 31 AARWFQSEFKGDVFYAVKANPSPWVIRELAQAGVRSFDVASLNEVELVANEAPGSRMAFM 90 Query: 79 VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADP 136 K A + + + A K + L + V + Sbjct: 91 HPVKSRAAIAAAYFDHGVKTFSFDTHEELAKILDATGQAKDLNLIVRMGVQAEGAAYSLS 150 Query: 137 NRPFSRLGEKCKDKIES--EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194 + + + +++ G+ FH + F A + + + Sbjct: 151 GKFGVESHNAPALLLAARRATQDLMGVSFHVGSQCMRPTAFQAAMAQASRALVRAGVLAD 210 Query: 195 WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT----VLD 250 + +GGG D + L ++ + E E L ++ Sbjct: 211 VVDVGGGFPSIYPGMVPPDLSEYLAAIDRGFAEMMVHETTELWCEPGRALVAEASSLLVK 270 Query: 251 ISENIKNLVIVDSSVEAHVPDYLLYQESATI--------YPNTGPYTAMVCGRSCLAGDI 302 + + + ++ + D + + G G +C + D Sbjct: 271 VELKKGDALYLNDGSYGSLFDAAHMKWPFPVKLFRKNGEVVEEGLKPFRFYGPTCDSVDH 330 Query: 303 F-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 G F+ + V GD I + Y + FNG Sbjct: 331 MPGPFYLPESVDEGDYIEIGMLGAYGVAMNTRFNGF 366 >gi|119627875|gb|EAX07470.1| arginine decarboxylase, isoform CRA_b [Homo sapiens] Length = 437 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 118/362 (32%), Gaps = 37/362 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L Q G + ++ E+ L Sbjct: 18 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 75 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H K + + + +++ K K+ L I Sbjct: 76 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 135 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 136 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 195 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG T+ + + F E V I+ E G Sbjct: 196 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 255 Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272 VT+ T+ +++ + I +S + ++ Sbjct: 256 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPT 315 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + Q+ + Y++ + G + D E + + +GD + F+++ Y + + Sbjct: 316 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 373 Query: 333 WF 334 F Sbjct: 374 PF 375 >gi|68473782|ref|XP_718994.1| hypothetical protein CaO19.6032 [Candida albicans SC5314] gi|68473991|ref|XP_718892.1| hypothetical protein CaO19.13453 [Candida albicans SC5314] gi|2499344|sp|P78599|DCOR_CANAL RecName: Full=Ornithine decarboxylase; Short=ODC gi|1814084|gb|AAC49877.1| ornithine decarboxylase [Candida albicans] gi|46440685|gb|EAK99988.1| hypothetical protein CaO19.13453 [Candida albicans SC5314] gi|46440791|gb|EAL00093.1| hypothetical protein CaO19.6032 [Candida albicans SC5314] Length = 473 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 59/385 (15%), Positives = 115/385 (29%), Gaps = 56/385 (14%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D +++N+++ I V+ A+KC + + TL++ +S E+ L Sbjct: 77 FFVCDLGEIINSVNQWQQIL--PMVQPYYAVKCNSNPQILTTLSELGVNFDCASKNEIDL 134 Query: 66 GHEKF---GGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E Y K N + + V +L K I L Sbjct: 135 VLSLGIHQAHERIIYANPCKTNSFIRHAADENVNLTTVDNVHELYKLAKFHPHCKILIRL 194 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + S + + + +GE + V+G+ FH K F +K Sbjct: 195 ITDDSTAQCQLSTKFGCDLNTAIGEILPKA-KELGLQVHGVAFHVGSGAKDFSSIYQAIK 253 Query: 181 NIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLE 232 + F + + +GGG + L++F + ++ E Sbjct: 254 DSRILFDEMLSMGFTPKLLDIGGGFERETFPQSSQMVKFALEKFFPIEFSQSNEIKFIAE 313 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------------------AHVPDY 272 PG +V N TL T ++ + ++ + H Sbjct: 314 PGRFMVANAFTLITHIIARRDLPTGGNNNNNDMTPSAMLYINDGVYGNLNCILFDHQTPK 373 Query: 273 LLYQESATIYPNTGP-------------------YTAMVCGRSCLAGDIFGEFHFEKP-V 312 + + + + G +C D V Sbjct: 374 VYVLTNENQLFYKQEMMRSLSVNNNNNNNNKTDGFKFSIWGPTCDGLDCVSSLAKLSKNV 433 Query: 313 KIGDRISFEDVAGYNINRKNWFNGI 337 ++GD + FE+V Y FNG+ Sbjct: 434 QVGDWLFFENVGAYTSCASTKFNGL 458 >gi|330722436|gb|EGH00276.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC2047] Length = 198 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 64/189 (33%), Gaps = 8/189 (4%) Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 + + LGGG+ T + + + E + + + EPG +I N Sbjct: 7 LAEDQITLHHLDLGGGLGVTYDNEKPPHPSEYAAAIVEKLKGRDLTLIFEPGRSIAANAG 66 Query: 243 TLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESAT---IYPNTGPYTAMVCGRSCL 298 L T V + KN +VD+++ + L A + + + G C Sbjct: 67 ILVTEVALLKHTADKNFAVVDAAMNDLIRPALYQAWQAIEAVKPRHGATHRYDIVGPICE 126 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358 GD G+ ++ GD ++ Y + +N N + + + R S Sbjct: 127 TGDFLGKDRELS-LEAGDLLAIRSSGAYGFTMSSNYNSRNRAAEIIVDGEQCHVVRRRES 185 Query: 359 YNDYYNNLS 367 + D S Sbjct: 186 FADQIALES 194 >gi|326404575|ref|YP_004284657.1| putative lysine/ornithine decarboxylase [Acidiphilium multivorum AIU301] gi|325051437|dbj|BAJ81775.1| putative lysine/ornithine decarboxylase [Acidiphilium multivorum AIU301] Length = 376 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 110/368 (29%), Gaps = 33/368 (8%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M+ TP L+D ++ + A + A+K A + D L ++S+ Sbjct: 13 MVSTPAILVDLDRVAA--NFAALRAALPDAAIYYAVKANPAAPVLDRLVGLGSRFDAASI 70 Query: 61 YEVM-LGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ ++ + +A D F++ +L+K A Sbjct: 71 EEIRACLAAGAAPAAISFGNTVKKRAAIAEAHARGVDLFAFDSDEELDKLAAAAPGAKVY 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLC 174 L ++ +R F G +D + + G+ FH + Sbjct: 131 CRLAVSQDG-----ADWPLSRKFGTSGTHARDLLVRAAERGLIPWGVSFHVGSQQTGVGA 185 Query: 175 FSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKY 225 + + + + ++LGGG +D +++ Sbjct: 186 WRTAIGQAAAVFTDLRARGIDLRLLNLGGGFPTRYRDDIPPLGDFGAAIMDAVRQAFGNN 245 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPDYLLYQESATI 281 + +EPG AIV + + V+ + V +D + + I Sbjct: 246 VPDLLIEPGRAIVGDAGVAVSEVVLACTRHEDEGRRWVYLDLGRFGGLAETEGEAIRYRI 305 Query: 282 YPN---TGPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKNW-F 334 A++ G SC D+ + GDR+ D Y + + F Sbjct: 306 TAPGVAGADAPAVLAGPSCDGVDVMYRETPCPLPASLAAGDRVLIHDTGAYVTSYASQGF 365 Query: 335 NGINMPTI 342 NG P Sbjct: 366 NGFLPPEE 373 >gi|325923438|ref|ZP_08185098.1| diaminopimelate decarboxylase [Xanthomonas gardneri ATCC 19865] gi|325546083|gb|EGD17277.1| diaminopimelate decarboxylase [Xanthomonas gardneri ATCC 19865] Length = 431 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 104/355 (29%), Gaps = 31/355 (8%) Query: 21 ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79 + + A +L A K A + TL +MDG ++S E+ H++ + Sbjct: 41 WMRAQLPAECELFYAAKANAEPPILRTLAPHMDGFEAASGGELAWLHQQQPQAALLFGGP 100 Query: 80 AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPS---VSYSKFILAD 135 D E+ + D + ++ +L + A + + + + + + L Sbjct: 101 GKLDSELAQAAALPDCTVHVESLGELERLATIAAQAGRCVPVFLRMNIAVPGAQSTRLMM 160 Query: 136 PNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLKNI----EK 184 +P G D + + + G FH + ++ ++ Sbjct: 161 GGQPSP-FGLDPDDLDAAIHRLRASPSLRLEGFHFHLMSHQRDAGAQLHLIAAYLRTVQQ 219 Query: 185 EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIV 238 + ++ GGG + FC L ++ ++ LEPG + Sbjct: 220 WRQRYGLGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGDALRLRLEPGRYVS 279 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG------PYTAM 291 + VLD+ + + H + Sbjct: 280 ASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQGHDHPFRVLRGARAPVLRDTPVT 339 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345 + G+ C D+ + GD ++F Y N + F P + Sbjct: 340 LVGQLCTPKDVLARNQPVAALAPGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFL 394 >gi|197101860|ref|NP_001126321.1| antizyme inhibitor 1 [Pongo abelii] gi|75061736|sp|Q5R7K3|AZIN1_PONAB RecName: Full=Antizyme inhibitor 1; Short=AZI; AltName: Full=Ornithine decarboxylase antizyme inhibitor gi|55731083|emb|CAH92257.1| hypothetical protein [Pongo abelii] Length = 448 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC +A + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G + + +GGG + V L F E V+I EPG V Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGVKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYYMMS 408 >gi|256396113|ref|YP_003117677.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Catenulispora acidiphila DSM 44928] gi|256362339|gb|ACU75836.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Catenulispora acidiphila DSM 44928] Length = 408 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 56/375 (14%), Positives = 108/375 (28%), Gaps = 34/375 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP++ D+ L + L + AGV L A+K + L+ +DG +S E+ Sbjct: 35 TPFFAYDRGLLADRLAAVRHALP-AGVHLSYAVKANPMPALLHHLSALVDGFDVASGLEL 93 Query: 64 MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E ++ EI +++ T+ + +L + + A ++ + Sbjct: 94 RAALDTPVRPEKVSFAGPGKTVAEIRQAVASGVTVELESELELTRVRAAAAEIGVAARVA 153 Query: 122 INPSVS-YSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + + + G + E G +N Sbjct: 154 VRVNPDFAVRGSGMRLGGGPQQFGVDSERVPDLLRLMAGEDLEFQGFHIFAGSQNLRAEE 213 Query: 175 ----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--- 227 + + H + + ++++GGG + E K + Sbjct: 214 ICEAQRRTVDLVVALAEHAPSPVRYVNVGGGFGIPYTARDTALDLAPIGENLAKLTDVVA 273 Query: 228 ------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272 +I +E G +V T VLD E+ + +V H Sbjct: 274 AALPGARIAVELGRYLVGEAGVYVTRVLDRKESRGKVFLVVDGGLHHQLAASGNFGQTIR 333 Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 A T V G C D+ G+ +GD I Y + Sbjct: 334 RNYPLAVANRIDETAAGKVSVVGCLCTPLDLLGDDVDLPAADVGDLIVLFQAGAYGLTAS 393 Query: 332 NW-FNGINMPTIAVK 345 F P + Sbjct: 394 PTAFLSHPAPVEVLV 408 >gi|156550612|ref|XP_001604342.1| PREDICTED: similar to ENSANGP00000020224 [Nasonia vitripennis] Length = 405 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 102/362 (28%), Gaps = 21/362 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +++D ++ + K V A+KC + L +S E++ Sbjct: 34 PIHMLDVGDIIRKHQLWME--KMPRVVPYYAVKCNPDSTVIKVLAALGGHFDCASKQEII 91 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + Y K + + +L K KD I +R Sbjct: 92 QTMSQGVSADRIIYANPMKFSSHIEYARKVGVAMMTADCEDELKKIKDVYPDAKIVIRIR 151 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS----A 177 + V+ + P S + ++G FH + Sbjct: 152 CDTEVTTACLGEKFGCDPSSD-AVQLIKATLDLGLTLHGFSFHVGSPCGEPMAICRGILW 210 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 I+ + I +GGGI D + + + E Y + Sbjct: 211 CKNLIDTAKAMGCRDVSLIDIGGGIPELINDALENIDSSIEIISEPGRYYVTSAFTSAAY 270 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ-ESATIYPNTGPYTAMVCG 294 T + + H+ + ++T N Y + V G Sbjct: 271 VFGKKTLMKENQKTFMYYVSDGVYGSFIEELLHIKARHPVRLTNSTSITNDEKYLSTVWG 330 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 +C + D+ + H +GD +++ D+ Y+ FNG P I I Sbjct: 331 PTCDSYDVLLKNHMLPEFNVGDWLAWSDIGSYSTCLSTEFNGFQAPKI--------HPII 382 Query: 355 RE 356 R Sbjct: 383 RR 384 >gi|58265238|ref|XP_569775.1| ornithine decarboxylase [Cryptococcus neoformans var. neoformans JEC21] gi|57226007|gb|AAW42468.1| ornithine decarboxylase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 527 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 58/407 (14%), Positives = 113/407 (27%), Gaps = 63/407 (15%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D + + + V++ A+KC + + L+ +S E+ Sbjct: 106 FFAADLSAVYQAVQMWRASPIGSRVEIFYAVKCNPSPAVLHLLSLMGTSFDCASSSEINQ 165 Query: 66 GH---EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 G+ + K A + F+ V +L K K + + Sbjct: 166 VLSLPSAPSGDRIIFANPCKPASFIRTAAQRGVSMMTFDNVDELYKVKRICPNAKLVLRM 225 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + S S + L S G NV G+ FH K + F+ + Sbjct: 226 LTDDSKSLCRLGLKFGAPVDSCPG--LLKVARQLGLNVVGVSFHVGSGCKDPMQFADAVW 283 Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEA 236 K F + + +GGG + + E V+I EPG Sbjct: 284 RARKVFDMGKEAGYNFDLLDIGGGFERETFAEMTQVLKDSFDLYFPEDSGVRIIAEPGRF 343 Query: 237 IVTNTTTLNTTVLDISE-----------------------NIKNLVIVDSSVEAHVPDYL 273 +V++ TL T+++ V S + D+ Sbjct: 344 LVSSAFTLATSIIASRRAPKAEASQQVQAATQEDTKSADVMYYINDGVYGSFNCIMFDHQ 403 Query: 274 LYQESATIYPNTGP---------------------------YTAMVCGRSCLAGDIFGEF 306 + + V G +C + D + Sbjct: 404 IVHPHPLTIGHKLAIAAPPFPPPPNVQLEVDLPVQMGYKDVEKVSVWGPTCDSIDCVRQL 463 Query: 307 HFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 + +GD I + ++ Y + + FNG + + G + Sbjct: 464 VDLPKGMDVGDWIGWGEMGAYTLCAASTFNGFDRSP-VLWTTGGNTE 509 >gi|134109243|ref|XP_776736.1| hypothetical protein CNBC2270 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259416|gb|EAL22089.1| hypothetical protein CNBC2270 [Cryptococcus neoformans var. neoformans B-3501A] Length = 527 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 58/407 (14%), Positives = 113/407 (27%), Gaps = 63/407 (15%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D + + + V++ A+KC + + L+ +S E+ Sbjct: 106 FFAADLSAVYQAVQMWRASPIGSRVEIFYAVKCNPSPAVLHLLSLMGTSFDCASSSEINQ 165 Query: 66 GH---EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 G+ + K A + F+ V +L K K + + Sbjct: 166 VLSLPSAPSGDRIIFANPCKPASFIRTAAQRGVSMMTFDNVDELYKVKRICPNAKLVLRM 225 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + S S + L S G NV G+ FH K + F+ + Sbjct: 226 LTDDSKSLCRLGLKFGAPVDSCPG--LLKVARQLGLNVVGVSFHVGSGCKDPMQFADAVW 283 Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEA 236 K F + + +GGG + + E V+I EPG Sbjct: 284 RARKVFDMGKEAGYNFDLLDIGGGFERETFAEMTQVLKDSFDLYFPEDSGVRIIAEPGRF 343 Query: 237 IVTNTTTLNTTVLDISE-----------------------NIKNLVIVDSSVEAHVPDYL 273 +V++ TL T+++ V S + D+ Sbjct: 344 LVSSAFTLATSIIASRRAPKAEASQQVQAATQEDTKSADVMYYINDGVYGSFNCIMFDHQ 403 Query: 274 LYQESATIYPNTGP---------------------------YTAMVCGRSCLAGDIFGEF 306 + + V G +C + D + Sbjct: 404 IVHPHPLTIGHKLAIAAPPFPPPPNVQLEVDLPVQMGYKDVEKVSVWGPTCDSIDCVRQL 463 Query: 307 HFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 + +GD I + ++ Y + + FNG + + G + Sbjct: 464 VDLPKGMDVGDWIGWGEMGAYTLCAASTFNGFDRSP-VLWTTGGNTE 509 >gi|119627882|gb|EAX07477.1| arginine decarboxylase, isoform CRA_i [Homo sapiens] Length = 392 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 118/362 (32%), Gaps = 37/362 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L Q G + ++ E+ L Sbjct: 18 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 75 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H K + + + +++ K K+ L I Sbjct: 76 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 135 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 136 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 195 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG T+ + + F E V I+ E G Sbjct: 196 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 255 Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272 VT+ T+ +++ + I +S + ++ Sbjct: 256 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPT 315 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + Q+ + Y++ + G + D E + + +GD + F+++ Y + + Sbjct: 316 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 373 Query: 333 WF 334 F Sbjct: 374 PF 375 >gi|255539092|ref|XP_002510611.1| ornithine decarboxylase, putative [Ricinus communis] gi|223551312|gb|EEF52798.1| ornithine decarboxylase, putative [Ricinus communis] Length = 416 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 105/361 (29%), Gaps = 38/361 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D + + + R+ ++ A+KC + + L +S E+ Sbjct: 50 FYVLDLGAVAGLMH--KWSRELPMIQPYYAVKCNSEISLIGALAALGCNFDCASKAEIQS 107 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y K +N D F++ +L+K K I ++ Sbjct: 108 ILSLGVSPDRIIYANPSKPESHIIYAANVDVNLTTFDSKHELHKISKCHPKCSLLIRIKP 167 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLCFS 176 S+ G ++ + ++G+ FH E+++ + Sbjct: 168 PDDSGA-------RWPLGSKFGALPEEIEPLLLAAQAAKLTISGVSFHIGSESRNPHAYR 220 Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 + + F + + +++GGG + F + ++I Sbjct: 221 GAIGAAKHVFDTASRLGMPPMRVLNIGGGFIAGSNFDEAATVIKAALQDYFGDNPGIEII 280 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------------DSSVEAHVPDYLLYQ 276 EPG L T++ + S A VP Sbjct: 281 SEPGRYFAETVFMLATSITGKRVRGGIIEYWINDGVFGSFSCVIFGVSPPACVPLACTSN 340 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + Y + V G +C A D ++I D + F + Y F G Sbjct: 341 RANPKCKGEPTYKSTVYGPTCDAVDKVFVDQELPELEINDWLVFPYMGAYTTANATIFQG 400 Query: 337 I 337 Sbjct: 401 F 401 >gi|207108770|ref|ZP_03242932.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori HPKX_438_CA4C1] Length = 193 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 103/193 (53%), Gaps = 18/193 (9%) Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLNTTV 248 + W++ GGG H T DY V Q +K+F E+Y ++ LEPGEAI L +V Sbjct: 1 FRNMAWVNFGGGHHITRSDYNVNLLIQTIKDFKERYHNIEVILEPGEAIGWQCGFLIASV 60 Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----------------NTGPYTAMV 292 +DI +N + + ++D+S AH+PD L +I N G ++ + Sbjct: 61 IDIVQNDQEIAVLDASFSAHMPDCLEMPYRPSILKVSAENDEELIEVEKGENQGAFSYFL 120 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G +CLAGD G F FE P+K GD+I F+D+ Y I + N FNG+ +P++A + G K Sbjct: 121 GGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQG-FK 179 Query: 353 AIREFSYNDYYNN 365 ++ FSY DY N Sbjct: 180 ILKNFSYEDYKNR 192 >gi|198432637|ref|XP_002122254.1| PREDICTED: similar to ornithine decarboxylase 1 [Ciona intestinalis] Length = 413 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 59/342 (17%), Positives = 117/342 (34%), Gaps = 24/342 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + V+L A+KC + L G +S E+ Sbjct: 50 FYIGDLNRVFLRHQQWKEVLPR--VELFYAIKCCPLMPVIRLLAALGTGFDCASQNEIES 107 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y + K + ++ K + ++ LR+ P Sbjct: 108 VISIGVDPAKIIYALPCKPASQLQHARTRKVSLMTFDNEDELHKIQKYFPDARLVLRLLP 167 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + F + G+K + NV GL F + KS + L+N K Sbjct: 168 DETGATFKMGSKFGCTLEEGKKLLVHAKKLDLNVIGLSFFVGDDCKSSIGMRLNLENSRK 227 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEPGE 235 F ++ I +GGG DKD + K F + V+I EPG Sbjct: 228 MFDFASSIGINMDLIDIGGGFPGNDKDQKLFLQIANDTRDTLDKLFPSECGVRIIAEPGR 287 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295 V ++ ++ T+++ ++ + + E + + + ++ G Sbjct: 288 YFVESSFSIATSIVGKKQSEGIWCRIVFNAET------------KRFSDKAVHDTIIYGT 335 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 +C DI + + + D + ++D+ Y + K FNG+ Sbjct: 336 TCDGTDIIAQNVALPELDLEDWLIWDDMGAYTVLCKFGFNGV 377 >gi|167627105|ref|YP_001677605.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597106|gb|ABZ87104.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 403 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 56/380 (14%), Positives = 109/380 (28%), Gaps = 33/380 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D L + + VKL ALK + ++ +S+ E+ Sbjct: 20 PFFYYDLDMLEKHAKELQKL----PVKLWYALKANPLSKIIKVFDEQNINFDVASIGELD 75 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKA--QKLHKKIG 119 + + + K + +++Q D ++ ++ Sbjct: 76 QVLSQGVDPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSDLIEKNNINVEVL 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCENKS 171 LR+ + + + + G D S ++ G+ Sbjct: 136 LRMQLVWNDQESNVLGGGGCVTPFGLSINDWKDFFDSAPDISNNMSIIGMHCFQWGNILC 195 Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 S + K I K ++ I LGGGI L Sbjct: 196 LDKLSQIWKTITKALLDLSEAINVSLKIIDLGGGIGIPYNSSQKAVSINDLISCINNLKK 255 Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATI 281 ++ +LE G V + T V+DI ++V H+ L + Sbjct: 256 EFPDIEYWLELGRYAVAESGVYITKVVDIKSVNNINLLVTDGGAQHLVRPALTGESFPIE 315 Query: 282 Y----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 + + G C + D G K + + D + F+ Y F Sbjct: 316 LLREESCSETNDFQIHGPLCTSLDKAGIASLPKDIGLNDYLIFKQTGAYGFTESMPFFLC 375 Query: 337 INMPTIAVKNVDGTIKAIRE 356 N+P + G ++ IR+ Sbjct: 376 HNLPAEIIFYK-GHLQTIRQ 394 >gi|198423004|ref|XP_002120700.1| PREDICTED: similar to ornithine decarboxylase 1 [Ciona intestinalis] Length = 437 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 116/349 (33%), Gaps = 23/349 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +++ NL ++ A+KC + + L G +S +E+ Sbjct: 49 FYIGDLGQIVRNLQLWTKHM--PQIRPYYAMKCNPSQPVVQLLASLGVGFDCASKFEIES 106 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + + V K T+ F+ +L+K K H L + Sbjct: 107 ALKCGVKPDDIIFAVPCKMSSHIEYACRSGVRTMTFDNADELHKIKRI----HSTGRLLM 162 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKI--ESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 V+ + + ++ + + E K + + N+ G+ FH + S L+ Sbjct: 163 RLDVTEFERGIKFGDKFGASMPEARKLILLCKQLDLNLVGICFHPGSGSDSSEATRNCLQ 222 Query: 181 NIEKEFG---HFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYSVQIYLEPGE 235 +K + ++ I +GGG + K F + V + EPG Sbjct: 223 KCKKLYDFATSNEVHLKIIDIGGGFVCGENFIEISETVTATVDKLFPPQTGVTVIAEPGR 282 Query: 236 AIVTNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----Y 288 V N T+V +++ K + + + ++ Y Sbjct: 283 FFVKNAFAFVTSVHGKALVNDRAKYYIGAGVFSTFCMTLFEEFERIPESLSRKAENCEVY 342 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G + DI +IGD F+++ Y+ FNG Sbjct: 343 ASNVYGPTGAGVDIVLNNIMLPEARIGDWWFFDNMGAYSSLVSIGFNGY 391 >gi|302842658|ref|XP_002952872.1| hypothetical protein VOLCADRAFT_63034 [Volvox carteri f. nagariensis] gi|300261912|gb|EFJ46122.1| hypothetical protein VOLCADRAFT_63034 [Volvox carteri f. nagariensis] Length = 380 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 97/356 (27%), Gaps = 33/356 (9%) Query: 26 KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-MLGHEKFGGETHAYNVAYKDC 84 V A+KC+ + L G +S E+ M+ + K Sbjct: 1 AMPRVLPYYAVKCYPEPAILKLLMALGAGFDCASKGELDMMLRMGASPARIIFAHPCKRS 60 Query: 85 EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLG 144 + K K+ LRI ++ L Sbjct: 61 CDFRFAREHGIQYTTFDTVSELHKIAEMDPEFKLVLRIRADDPGARVPLGLKYGAEVSEA 120 Query: 145 EKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGG 201 G+ FH K+ F+ ++N K F +++ + +GGG Sbjct: 121 PALLRAARELALECCGVSFHVGSAAKNLATFTNAIENARKVFDEAASLGYRMDLLDIGGG 180 Query: 202 ---IHFTDKDYPVKDFCQRLKEFSEKYSVQ--------IYLEPGEAIVTNTTTLNTTVLD 250 + + + KY + EPG ++TL T V+ Sbjct: 181 FTGHFDEMGNVMFGEIANTINAALAKYFPPGGDLGDVRVIAEPGRYFAETSSTLLTPVIG 240 Query: 251 ----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP------YTAMVCG 294 I ++ + S V D + P Y + + G Sbjct: 241 QRDRVAKDGSIHKDYWLTDGLYGSFNCIVYDGQNPEFRVIRSPIQPEPIDTRSYVSTLWG 300 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG--INMPTIAVKNVD 348 +C + D+ + ++ GD + + + Y + FNG P D Sbjct: 301 PTCDSADVVYKDVALPALRNGDWLLWPNAGAYTVAGACDFNGIEFTHPCKVYVWSD 356 >gi|148261170|ref|YP_001235297.1| Orn/DAP/Arg decarboxylase 2 [Acidiphilium cryptum JF-5] gi|146402851|gb|ABQ31378.1| ornithine decarboxylase [Acidiphilium cryptum JF-5] Length = 376 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 111/368 (30%), Gaps = 33/368 (8%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M+ TP L+D ++ + A + A+K A + D L ++S+ Sbjct: 13 MVSTPAILVDLDRVAA--NFAALRAALPDAAIYYAVKANPAAPVLDRLVGLGSRFDAASI 70 Query: 61 YEVM-LGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ ++ + +A D F++ +L+K + A Sbjct: 71 EEIRACLAAGAAPAAISFGNTVKKRAAIAEAHARGVDLFAFDSDEELDKLAEAAPGAKVY 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLC 174 L ++ +R F G +D + + G+ FH + Sbjct: 131 CRLAVSQDG-----ADWPLSRKFGTSGTHARDLLVRAAERGLIPWGVSFHVGSQQTGVGA 185 Query: 175 FSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKY 225 + + + + ++LGGG +D +++ Sbjct: 186 WRTAIGQAAAVFTDLRARGIDLRLLNLGGGFPTRYRDDIPPLGDFGAAIMDTVRQAFGNN 245 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPDYLLYQESATI 281 + +EPG AIV + + V+ + V +D + + I Sbjct: 246 VPDLLIEPGRAIVGDAGVAVSEVVLACTRHEDEGRRWVYLDLGRFGGLAETEGEAIRYRI 305 Query: 282 YPN---TGPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKNW-F 334 A++ G SC D+ + GDR+ D Y + + F Sbjct: 306 TAPGVAGADAPAVLAGPSCDGVDVMYRETPCPLPASLAAGDRVLIHDTGAYVTSYASQGF 365 Query: 335 NGINMPTI 342 NG P Sbjct: 366 NGFLPPEE 373 >gi|302384357|ref|YP_003820180.1| Orn/DAP/Arg decarboxylase 2 [Brevundimonas subvibrioides ATCC 15264] gi|302194985|gb|ADL02557.1| Orn/DAP/Arg decarboxylase 2 [Brevundimonas subvibrioides ATCC 15264] Length = 421 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 90/335 (26%), Gaps = 17/335 (5%) Query: 20 TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYN 78 A + + N + A+K + + +TL + G +SL E+ L A+ Sbjct: 31 AARWFQDNLKADVFYAVKANPSRWVIETLVEAGVTGFDVASLAEIELVRSVSTDVRLAFM 90 Query: 79 VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADP 136 K + ++ ++ + A + L + +VS + Sbjct: 91 HPVKSRSAITKAYFDHGVRTFSLDCEDELQKILDATGGANDLNLLVRMAVSADGAAYSLS 150 Query: 137 NRPFSRLGEKCKDKI---ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193 + + + + + G+ FH + + A + + + + Sbjct: 151 GKFGVSTDQAPSLLLATRRAVKDGLMGVCFHVGSQCMRPTAYQAAMAQVGRAITRAGVIV 210 Query: 194 EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 + + +GGG D + ++ E E L I Sbjct: 211 DIVDIGGGFPSVYPGMVPPDMSEYADAIHRGFNEMPVSETTELWCEPGRALVAESSSILA 270 Query: 254 NIKNLVIVDSSVEA-----HVPDYLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIF 303 + + T G G +C + D Sbjct: 271 RVDLRKGDALYLNDGSYGSLFDATHSRWPFPTKLVRDGDASSDLKPFQFYGPTCDSIDHM 330 Query: 304 -GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 G F ++ GD I + Y + FNG Sbjct: 331 PGPFWLPADIREGDFIEIGMLGAYGVAMSTGFNGY 365 >gi|74316735|ref|YP_314475.1| diaminopimelate decarboxylase [Thiobacillus denitrificans ATCC 25259] gi|74056230|gb|AAZ96670.1| diaminopimelate decarboxylase [Thiobacillus denitrificans ATCC 25259] Length = 402 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 100/350 (28%), Gaps = 36/350 (10%) Query: 28 AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAY--KDCE 85 G L A+K + + TL ++ G SS E+ F ++ D Sbjct: 46 PGCDLFYAIKANSDLPILQTLAPHVAGFEVSSGGELAWVRAHFAEIPVIFSGPGKLDDEL 105 Query: 86 IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIGLRINPSVSYSKFILADPNRPFSRL 143 A+ D + + +L + + A +L + + LR+N ++ + Sbjct: 106 RQALEHGVDCLHVESRHELQRLAEIAARLGRTAPVALRVNLTLDALAETPLMMGGKPTPF 165 Query: 144 GEKCKD-------KIESEIKNVNGLMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQ 192 G + E + GL FH +A L + Sbjct: 166 GIPTEQLPACLDWLRERPEIRLRGLHFHLLSHQLDAAAHLRLVAAYLAQTRRWCEAHGLA 225 Query: 193 IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK---YSVQIYLEPGEAIVTNTTTLN 245 ++ +++GGGI + + F L + V++ E G + Sbjct: 226 LDHVNVGGGIGINYREPARQFDWPAFSAGLASLLHEAGLPGVRVRFELGRYVTAACGYYA 285 Query: 246 TTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATI------------YPNTGPYTAMV 292 V+DI + +V H Y P V Sbjct: 286 MQVVDIKHSHGKTFVVGRGGSHHFRTPYAQGHSHPFHVLPVDDWPYAFARPQAADQRVSV 345 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPT 341 G+ C D+ + V+ D + F Y + + F P Sbjct: 346 VGQLCTPKDLLAFDAPVESVRCNDVLVFPYAGAYAWHISHHDFLRHPHPA 395 >gi|121708875|ref|XP_001272275.1| ornithine decarboxylase, putative [Aspergillus clavatus NRRL 1] gi|119400423|gb|EAW10849.1| ornithine decarboxylase, putative [Aspergillus clavatus NRRL 1] Length = 402 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 101/348 (29%), Gaps = 31/348 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D +++ V A+KC + L G +S+ E+ Sbjct: 30 PFFVADLGQVIRQHRRWR--VNLPDVHPFFAVKCNPDPNLLKLLADLGTGFDCASIEELR 87 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + K + + + + ++ LRI Sbjct: 88 TVLSLGVDPSRIIFANPCKSASSLVFAARTGVTRTTFDNLDELDSIRTFLPNAQLVLRIF 147 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S + L + + V G+ FH + + +++ + Sbjct: 148 ASDSDALINLGEKFGASVEASLPLLQRARELGLGVCGVSFHVGTGASNASAYVNAIQHAK 207 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 FG+ + ++ +GGG + + LKE V++ EPG + Sbjct: 208 IVFGYGKSLGFDMNFLDIGGGFQDCNLEDIACSLRPMLKEEF-PSGVRLIAEPGRYYARS 266 Query: 241 TTTLNTTVLDISENIKNLVIVDSSV-----------------EAHVPD------YLLYQE 277 TL +L ++ + + V + + Sbjct: 267 AYTLACKILSRRRHLGTDDHDKPDMLYQNDGVYGSFMNVLIEKEIVRPSLVAYNWPSHSH 326 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVA 324 S + + G +C + D + ++IGD + ++++ Sbjct: 327 SNDTRQKLEEHRYTIWGPTCDSVDCVAKDVPMSSEIRIGDWLKYKNMG 374 >gi|157953446|ref|YP_001498337.1| hypothetical protein AR158_C256R [Paramecium bursaria Chlorella virus AR158] gi|156068094|gb|ABU43801.1| hypothetical protein AR158_C256R [Paramecium bursaria Chlorella virus AR158] Length = 372 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 108/350 (30%), Gaps = 22/350 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ + + +D + + A+KC + T+ +S +E+ Sbjct: 19 FYVSSPKIVEELVDQWNILFPR--IIPHYAVKCNNDDVLLKTMRDKNVNFDCASSHEIKK 76 Query: 66 G-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 H + K D I A D F++ +L+K + ++ LRI Sbjct: 77 VIHLGVDPSRIIFAHTMKSIDDLIFAKDQGVDIATFDSSFELDKINE--YHPTCRMILRI 134 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + L + + + V G+ FH +++ + +K Sbjct: 135 RCDDPNATVQLGNKFGANDDEVLHLLEHAKKLNIEVVGISFHVGSGSRNPEAYYRAIKAS 194 Query: 183 EKEFGH---FITQIEWISLGGGIH-----FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 F + +GGG+H Y ++ + +F + ++ I EPG Sbjct: 195 RDAFDAAVSVGHTPYILDIGGGLHADIDDDEISTYMSENINDAINDFFPEETIMIIAEPG 254 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-------HVPDYLLYQESATIYPNTGP 287 + + L T V+ + + Q + Sbjct: 255 RFFAEHYSVLVTQVIGKRIRDGLYEYFFNESTYGGFSNVIFEKSIPIPQLVRYVSDEEEY 314 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 +++ G +C D+ + + +GD + F + Y FNG Sbjct: 315 VPSVLYGCTCDGIDVINQKVALPEMNVGDWVYFNNWGAYTNVLVTSFNGF 364 >gi|254483006|ref|ZP_05096241.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [marine gamma proteobacterium HTCC2148] gi|214036691|gb|EEB77363.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [marine gamma proteobacterium HTCC2148] Length = 399 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 103/356 (28%), Gaps = 27/356 (7%) Query: 3 KT-PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 T P YL L L + A+K + +TL +SL Sbjct: 33 PTDPLYLFCPDALQTRAKRFLTHFPGT---VSYAVKANPEVRVLETLAATGLQNFDVASL 89 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE---IDAVLSNCDTIIFNTVSQLNKFKDKAQ-KLHK 116 EV E G YN K E + + + +S+L K Sbjct: 90 DEVRRVSEYCPGSILHYNNPIKAEEAVAESYLRYGVRSFALDEMSELEKIHRCTGGDPDV 149 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 +R + + + + IE L FH + + Sbjct: 150 TYTVRFKLEHAGAAYDFGSKFGATEDYAVELLQAIEKIGGRPA-LTFHPGSQCTDPQMYE 208 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIY 230 L+ + + +I++GGG +D + + + + + Sbjct: 209 RYLEAASRILSRAGVKPAFINVGGGFPEYYQDTSIPALEEYFSVISSSMDKYFDTDIPLI 268 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK--------NLVIVDSSVEAHVPDYLLYQESATIY 282 EPG +V ++ +L V+ + + K + + S+ ++E + Sbjct: 269 CEPGRGMVASSVSLLARVIHVRDCGKSVFVNDGVYGGMQEQSLVDICLPVRAWREGEALI 328 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 V G +C D + ++ GD I F + Y FNG Sbjct: 329 ATESD--YHVFGPTCDPVDRLSKSTALPKELRTGDYIEFGLLGAYGSATTTTFNGF 382 >gi|129277532|ref|NP_001076080.1| antizyme inhibitor 1 [Bos taurus] gi|126717437|gb|AAI33310.1| AZIN1 protein [Bos taurus] gi|296480504|gb|DAA22619.1| ornithine decarboxylase antizyme inhibitor [Bos taurus] Length = 448 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 109/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ I +K +KC + + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + + + + G+ FH + K + L + Sbjct: 158 EDSIGGGEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G F + + +GGG + V L F E ++I EPG V Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYFV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIVAKKVVENDKFSSGVGKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ +++ + FN Sbjct: 338 VHKKYKADEPLFTSSLWGPSCDELDQIVENCLLPELNVGDWLIFDNMGADSVHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYYMMS 408 >gi|330991208|ref|ZP_08315160.1| Lysine/ornithine decarboxylase [Gluconacetobacter sp. SXCC-1] gi|329761701|gb|EGG78193.1| Lysine/ornithine decarboxylase [Gluconacetobacter sp. SXCC-1] Length = 379 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 102/360 (28%), Gaps = 31/360 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++D ++ ++ A+K A + L ++S E+ Sbjct: 19 TPCLVVDVDRVEERYRALREALPL--ARIYYAVKANPANAILRRLVGLGSAFDAASWEEI 76 Query: 64 MLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + E ++ A + D F+ +L+K A L Sbjct: 77 SMCLEAGARPADISFGNTVKKAGNIARAYQAGVDMFAFDCAEELDKLARHAPGSRVYCRL 136 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + + + + + GL FH + + A + Sbjct: 137 IVENEGADWPLSRKFGTTLDNARDLMLR--ARDLGLDPYGLSFHVGSQQTETGAYEAAIA 194 Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYL 231 + F + ++LGGG +D + E ++ + Sbjct: 195 RVGMLFTDLKAAGLDLRMVNLGGGFPIRYRDDVPGIDRFAVAISHAMTEHFGNDLPEMII 254 Query: 232 EPGEAIVTNTTTLNTTVL---------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 EPG +V + +++ V+ + ++ E + Sbjct: 255 EPGRFMVGDAGVVSSEVVLVSRRGMNDGVRWVYLDIGRFGGLAETEGEAIRYGIRTPHDG 314 Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINR-KNWFNGIN 338 TGP + G +C DI E + ++ GDRI Y FNG+ Sbjct: 315 METGP--VAIAGPTCDGADIMYEKTPYALPLALESGDRIELLSTGAYVSTYCSTGFNGLK 372 >gi|296227426|ref|XP_002759367.1| PREDICTED: antizyme inhibitor 1 isoform 1 [Callithrix jacchus] gi|296227428|ref|XP_002759368.1| PREDICTED: antizyme inhibitor 1 isoform 2 [Callithrix jacchus] gi|296227430|ref|XP_002759369.1| PREDICTED: antizyme inhibitor 1 isoform 3 [Callithrix jacchus] Length = 448 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 109/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC +A + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G + + +GGG + V L F E V+I EPG V Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY------------------QESAT 280 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFSSGVEKTGSDEPAFMYYVNDGVYGSFASKLSEDLNAIPE 337 Query: 281 IYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 ++ +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYYMMS 408 >gi|109087149|ref|XP_001082807.1| PREDICTED: antizyme inhibitor 1 isoform 3 [Macaca mulatta] gi|109087153|ref|XP_001083647.1| PREDICTED: antizyme inhibitor 1 isoform 7 [Macaca mulatta] gi|297299897|ref|XP_002805501.1| PREDICTED: antizyme inhibitor 1 [Macaca mulatta] Length = 448 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 109/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC +A + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCKHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G + + +GGG + V L F E V+I EPG V Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYYMMS 408 >gi|258543568|ref|YP_003189001.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-01] gi|256634646|dbj|BAI00622.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-01] gi|256637702|dbj|BAI03671.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-03] gi|256640756|dbj|BAI06718.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-07] gi|256643811|dbj|BAI09766.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-22] gi|256646866|dbj|BAI12814.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-26] gi|256649919|dbj|BAI15860.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-32] gi|256652909|dbj|BAI18843.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655963|dbj|BAI21890.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-12] Length = 437 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 103/357 (28%), Gaps = 27/357 (7%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++D + + ++ A+K A + L + ++S EV Sbjct: 77 TPCLVLDVDAVADRYHALGKAL--PQARIYYAVKANPAQPILRRLVELGSCFDAASWEEV 134 Query: 64 MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 L + ++ A + +F+ +L K A L Sbjct: 135 SLCLQAGASPDAISFGNTVKKVSAIRAAYEAGVRMFVFDCREELEKLAAHAPGSRVYCRL 194 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + +++ L+ ++ + GL FH + S + + Sbjct: 195 LV--DNYGAEWPLSRKFGTTVESAKELMLAARELGLDPYGLSFHVGSQQLSAEAYEVAIA 252 Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFC--QRLKEFSEKYSVQIYL 231 F + ++LGGG + + + E ++ + Sbjct: 253 RAAALFTDLSAAGLDLRMVNLGGGFPIRYRDDVPEIDHFTTAIFRAMTEHFGNALPEMLV 312 Query: 232 EPGEAIVTNTTTLNTTVLDI----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 EPG IV + + V+ + ++ V +D + + I + Sbjct: 313 EPGRFIVGEAGVVRSEVVLVSARGRKDGLRWVYLDIGRFGGLAETENESIRYAIRTSRDG 372 Query: 288 YT---AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINR-KNWFNGI 337 + G +C DI E + + G+++ Y FNG Sbjct: 373 SPTGRVALAGPTCDGADIMYEKTHYELPLDLTAGEQVDLLGAGAYVSTYCATGFNGF 429 >gi|254384891|ref|ZP_05000227.1| lysine/ornithine decarboxylase [Streptomyces sp. Mg1] gi|194343772|gb|EDX24738.1| lysine/ornithine decarboxylase [Streptomyces sp. Mg1] Length = 458 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 94/358 (26%), Gaps = 42/358 (11%) Query: 26 KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY-NVAYKD 83 V A+K + L + G +S E+ L E + A Sbjct: 66 PGTPVLHAFAVKAAPLVPVLRLLAEAGLGCEVASPGELALARAAGVAPERMVLDSPAKTS 125 Query: 84 CEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRINPSVSYSKFILADPNRPFS 141 E+ L+ + + +L + A IG+R+NP S Sbjct: 126 RELREALALGIAVNADNRQELERIDALAGAGPPASPIGIRVNPQTGAGTIDALSTATATS 185 Query: 142 RLGEKCKD--------KIESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHF 189 + G +D + +E + L H+ + + E+ Sbjct: 186 KFGVPLRDGGARAWLVRACAERPWITRLHTHSGSQGVPLALIAEGVRELHALAEEINAAA 245 Query: 190 IT-QIEWISLGGGIHFT---------DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 QI+ + +GGG+ Y + S + E G +++ Sbjct: 246 GRRQIDTLDIGGGLPVNFASDERTPGYAQYVAELRAAA--PALFDGSYGLVTEFGRSLLA 303 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAH--------------VPDYLLYQESATIYPNT 285 + V + + + + Y P Sbjct: 304 KHGLVLARVEYTKSTGGRPIALTHAGVQLATRTVYAPAAWPLRILPYDAGGAPKPGAPAV 363 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + G +C AGD+ + GD I D Y +N + P + Sbjct: 364 PVVAQDIAGPACFAGDLLATARELPQLSPGDLIGVPDTGAYFFTAHYGYNSLPRPAVY 421 >gi|269216241|ref|ZP_06160095.1| putative Orn/DAP/Arg decarboxylase 2 [Slackia exigua ATCC 700122] gi|269130500|gb|EEZ61578.1| putative Orn/DAP/Arg decarboxylase 2 [Slackia exigua ATCC 700122] Length = 396 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 56/382 (14%), Positives = 106/382 (27%), Gaps = 38/382 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D L + I V L A+K + D S E Sbjct: 15 GTPAFVFDAGALERRIAACRDIVGET-VGLCYAMKANPFF--VRPAAHAADRLEVCSPGE 71 Query: 63 VMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + Y+ + DA+ C + ++ + A + + Sbjct: 72 LDICKRAAIDPAKIVYSGVNKLPEDIGDAIDYGCGVLTAESLLHVRYINQVALEKGLVVD 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + + L D V G+ + + K L Sbjct: 132 VLLRLNAGSQ------FGMSKEDLVSVVDDLGAWPGIRVVGIHYFVGTQRKKLTHQIKEL 185 Query: 180 KNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVK--------DFCQRLKEFSEKYSV 227 + IE +E + G G+ + LK + K Sbjct: 186 EKIEAFIDELASEHDFVVERLEYGPGLAVPYFMDDDFSDDLAPLKEMADVLKRVATK--A 243 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 ++ +E G T +D+ N + H+ + Sbjct: 244 ELTIEMGRFFAAPCGAYVTRAMDMKSNKGTNYCILDGGMNHLTYFGQMMGMHVPQIANLS 303 Query: 288 Y-----------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FN 335 + +CG C DI + + GD ++F +V Y++ F Sbjct: 304 HLDRTVDAGNVAEWCLCGSLCTINDILTRAVELEDFRPGDVLAFFNVGAYSVTEGIHLFL 363 Query: 336 GINMPTIAVKNVDGTIKAIREF 357 MP I V+ DG++ +R+F Sbjct: 364 SRTMPRIVVRYDDGSVALVRDF 385 >gi|123493664|ref|XP_001326341.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] gi|121909254|gb|EAY14118.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] Length = 397 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 52/368 (14%), Positives = 117/368 (31%), Gaps = 27/368 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +L + + A+KC + L +S E+ Sbjct: 33 FWIADFNRIRRSLALWEENLSR--LHIHYAMKCCDEPELLKFLADRGVAYDCASEDEIRR 90 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + K + A + ++++T S+L K ++ LRI Sbjct: 91 ILALGVDANRIVFAHPIKSIDSIKYAKENGVTRLVYDTESELRKI--LRYYPEAEVFLRI 148 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC---ENKSFLCFSAML 179 P +++K L++ + K N G FH + +F + Sbjct: 149 KPRFTHAKIQLSNKFGADPKEVPKLMQLASELGANFIGFSFHVGSLCDDITTFRVALEYV 208 Query: 180 KNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEP 233 ++ + + +I +GGG Y + + + ++ + EP Sbjct: 209 AELKAKAEQLGLNVSFIDIGGGFLPPSIKAKYTFAEIAEAINTAIDELFDGDEIEFLAEP 268 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVI---------VDSSVEAHVPDYLLYQESATIYPN 284 G I ++ L V+ + E+ + + A D+ Sbjct: 269 GRFIASDFMDLVMPVICVKEHHDPDGDEQAVFIAEGIYGAFNALNYDHAEPHFLIRTEGA 328 Query: 285 TGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + + G++C + D+ E +++GD + E Y ++FNG + Sbjct: 329 SEGEMIKTRLWGQTCDSEDLVYEELSWPRLEVGDYLMIEKFGAYTYAPTSFFNGFMHHKV 388 Query: 343 AVKNVDGT 350 N + Sbjct: 389 FHINEEDE 396 >gi|323342515|ref|ZP_08082747.1| putative diaminopimelate decarboxylase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463627|gb|EFY08821.1| putative diaminopimelate decarboxylase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 402 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 80/386 (20%), Positives = 152/386 (39%), Gaps = 24/386 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 I+TPY+LIDK++L N++T + ++K + + + ++ S Sbjct: 3 IQTPYFLIDKEELEKNVNTFSNALQKYWPNSIFSYSVKTNSLPWVLEFMHSKKIRAEVVS 62 Query: 60 LYEVMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E L F + YN + ++++ L I ++ +L + + Sbjct: 63 DEEYQLSKLCGFSDDQIVYNGPIKGNDQLESALKGKAIINIDSEHELMYILENYHLVSDN 122 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVN----GLMFHNNCEN 169 IG+R+N K R G + +K+ +++K V GL FH N + Sbjct: 123 IGVRVNVPTHIFKKEDIGYEEDGFRFGFSDETGRLEKVITDLKKVGISKFGLHFHVNSVS 182 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSEK 224 +S +S++ K + + +I +GGG P + + L++ + Sbjct: 183 RSNDVYSSISKYAKNIINKYQLDPSYIDIGGGFFGGLPTKPSAESYIATIREELEDVVDI 242 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + ++ +EPG AI+ + L ++VLD+ E ++ + H+ Q Sbjct: 243 NTTKLIIEPGSAIIGSCVELYSSVLDLKETQNVEIVTTDASRLHIDPLWKKQNYFYRIKK 302 Query: 285 TGPYTAM------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 G + +CG +C+ D + E V GD+I FE V Y+I F Sbjct: 303 MGNESLNSGKDKLICGYTCMDHDRIMKLDKEVSVAAGDQIIFEKVGAYSITLGGPFIRY- 361 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 P + VK + + E + DYY+ Sbjct: 362 YPKVLVKEENDYLIVRDEMNVGDYYS 387 >gi|219520919|gb|AAI72060.1| Gm853 protein [Mus musculus] Length = 413 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 91/344 (26%), Gaps = 34/344 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + + D L++ T L V+ A+KC + + L G +S E+ Sbjct: 52 FMVADLDVLVSRHRTFLQALPR--VQPFYAVKCNSNPWVLLVLAALGTGFDCASQGELEQ 109 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + K + C + ++ K ++ LRI Sbjct: 110 VLGLGVAPSRIIFANPCKAVSHIQFAARCGVQLLTFDNEEELIKLARYHPRARLVLRIQT 169 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S F L V G FH + + + + + + Sbjct: 170 LDSQSTFPLHTKFGAHLEACGHLLQVARELGLAVVGASFHVGSDCHTPESYRQAIADCHR 229 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGE 235 F + + LGGG + R+ + F E+ +++ EPG Sbjct: 230 VFEMGCKAGHHMSLLDLGGGFPGVKGSEAKFEEVARVINTALAQYFPEETGIEVIAEPGR 289 Query: 236 AIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 + T ++ + D + + Sbjct: 290 FYAGSVCTAAVNIIVKKSSLDPGGHRKLAYYLNEGHYGVFRLFLRDPVPRIPIVVKEFPS 349 Query: 286 GP--YTAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGY 326 P + + G +C A D +F + DV Y Sbjct: 350 EPPLFPCTLYGPTCDAYDRLFSTEVQLPEL---------DVGAY 384 >gi|324999534|ref|ZP_08120646.1| Orn/DAP/Arg decarboxylase 2 [Pseudonocardia sp. P1] Length = 422 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 99/366 (27%), Gaps = 29/366 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+ +D Q + ++L A+K + L G +S E Sbjct: 58 PTPFLALDPQVVRERHAALAAAFG--DARILYAVKACPEPAVLRVLADAGAGFDVASQNE 115 Query: 63 VMLGHEKFGGE---THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L H V A + ++ ++ + ++ Sbjct: 116 IALCLAAGADPASLQHGNPVRGPGAAARAAADGVRRFVTDSAEDVDALAAEVPGARVQVR 175 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 L ++ + S + F P + + G+ FH + ++ + Sbjct: 176 LSVDDAGSATPFHGKFGALPGEAVALLRRAARLGLEPA--GVTFHAGSQQTRPATYAEAV 233 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDY---------PVKDFCQRLKEFSEKYSVQIY 230 + G + + LGGG T + V+ + Sbjct: 234 AVALRTAGRAGLRRPELDLGGGWPVTYRADVPGPGEFAAAVRAAVAGAVAAGHVDGADLL 293 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLYQESATIY 282 LEPG AI L TVL +S ++ + + Y Sbjct: 294 LEPGRAIAGPAGVLRATVLRVSRRPGIDHRRWVYLDVGRYQGLAETEGEAIGYPLRVPGR 353 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEF---HFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 ++ G +C D+ + GD + Y + + FNG Sbjct: 354 SGP-DGPCVLAGPTCDGDDVIYRRTPVALPGDLAAGDVVDLLHAGAYTSSYASVGFNGFG 412 Query: 339 MPTIAV 344 + V Sbjct: 413 PLDVVV 418 >gi|257487731|ref|ZP_05641772.1| ornithine decarboxylase, putative [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330985385|gb|EGH83488.1| ornithine decarboxylase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008471|gb|EGH88527.1| ornithine decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 371 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 108/352 (30%), Gaps = 26/352 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64 +Y +D + + N +L A+K + + L+Q +SL EV Sbjct: 16 FYTVDPRWITRNAQQFSGCFPGT---VLYAMKANPLEQVLEALSQGGINHFDVASLAEVQ 72 Query: 65 LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 H K + + ++ +L+K +D + I L Sbjct: 73 TVHNTLPNAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTISLF 132 Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S S + L + ++ S + GL FH + + A L Sbjct: 133 VRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTEWSLGLSFHVGSQALEDGPWLAAL 192 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233 + + + + +GGG + C+ ++ + + E Sbjct: 193 NDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCEHIQTSPTLKDLNLICEA 252 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG------- 286 G +V +L VL E + + + + + G Sbjct: 253 GRGLVYGGMSLFARVLSRREQSVFC---GAGIFGGLLSAQQWLQFPARVWREGTPYTGAA 309 Query: 287 PYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T + G +C + D + ++ D + F+ Y+++ + FNG Sbjct: 310 ENTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTGAYSVSLRTPFNGF 361 >gi|307179325|gb|EFN67689.1| Ornithine decarboxylase 1 [Camponotus floridanus] Length = 409 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 112/353 (31%), Gaps = 24/353 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D +L + K V A+KC + L +S E+ Sbjct: 36 FYITDIGNVLRKHQEWIT--KMPKVIPYFAIKCNPDPTVIKVLAALNVSFDCASKQEIEQ 93 Query: 66 G-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 G+ + Y A + + + ++L K KD + I +R Sbjct: 94 VMRYGVHGDRIIFAHPTKYPSHIKYAKKVGVEIMTVDNENELFKIKDLFSEAKIVIRIRC 153 Query: 123 NPSVSYSKFILA--DPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + + + ++ + + N+ G FH + + ++ Sbjct: 154 DAKNNSNTSVILGLKFGSEPNEETINLIKLAKHLRLNLYGFSFHVGSPCREMKAYKRGIE 213 Query: 181 NIEKEFG---HFITQ-IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPG 234 ++ ++ I +GGG + F + + + ++ EPG Sbjct: 214 LCKQLINISKAIGHDNVQLIDIGGGFP-GENGTNADMFANIINDAIQDLDPSIRVISEPG 272 Query: 235 EAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT--- 285 V ++ TL + ++ + + + + L Q + + Sbjct: 273 SYYVASSFTLAAYIHSKRITPKNGKMMRMYYMNCGVFNSFIDELLGLQSRTPVLLSEPIS 332 Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + + G + + D+ + V+IGD + ++D+ Y+ FNG Sbjct: 333 NEKFLSSIWGPTADSCDVIVKEMMLPEVQIGDWLIWKDMGAYSTALATTFNGF 385 >gi|58580977|ref|YP_199993.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425571|gb|AAW74608.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 426 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 100/354 (28%), Gaps = 29/354 (8%) Query: 21 ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79 + + A +L A K A + TL ++DG ++S E+ H + + Sbjct: 69 WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWLHAQQPQAPLLFGGP 128 Query: 80 AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138 D E+ + D + ++S+L + A + + + + +++ Sbjct: 129 GKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLTM 188 Query: 139 PFS--RLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF 189 G D + + G FH + ++ + + Sbjct: 189 GGHPSPFGLDPDDLDAAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLHLIAAYLRTVQRW 248 Query: 190 ITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVT 239 ++ GGG + FC L ++ ++ LEPG + Sbjct: 249 RHTYALGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVSA 308 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT-------AMV 292 + VLD+ + + H G T + Sbjct: 309 SCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRVLRGARTPVLRDTPVTL 368 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345 G+ C D+ + GD ++F Y + F P + Sbjct: 369 VGQLCTPKDVLARDQSVAALAPGDCLAFPLAGAYAWTISHQHFLMHPAPQMVFL 422 >gi|228936396|ref|ZP_04099194.1| Decarboxylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823228|gb|EEM69062.1| Decarboxylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 411 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 55/385 (14%), Positives = 108/385 (28%), Gaps = 40/385 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ + ++ N + + + L +LK + L SS+ E Sbjct: 12 GSPLYIYNLDEVSNAYEKLVASLPD-DSILYYSLKANPNPEVTKHLVNLGCYAEVSSIGE 70 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + Y K + A+ N + +V +L + A +L K + Sbjct: 71 LNTALDVGTHPDNCIYTGPGKTRKEIKYALSKNINHFSVESVEELIIIDELASELSKAVN 130 Query: 120 LRINPSVSY--------SKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENK 170 + + + ++ I + + I +NG +N Sbjct: 131 ITLRINPAFTVGKASIKMTGIPSQFGFDEESIDANVIQLITKNQNLKINGFHIYNGSNFH 190 Query: 171 SFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224 S N + E+I GGG ++LKE K Sbjct: 191 SVEMIEENFMNTLNTVINLQEKLSLEPEFIDFGGGFAAPFGKNESLPSYEKLKERLTKLL 250 Query: 225 -------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 S +I E G + TL TV + + + H+ + Sbjct: 251 RDKFKGTKSPKIAFESGRYLTATCGTLVGTVQSVKMSKGKKYCIVDFGINHIGGMSGLRR 310 Query: 278 SATIYPNTGPYT-----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 T+ T + G C D + ++ GD + +V Y Sbjct: 311 IPTVELQLFKLTSSENDTLIMDNVNIVGPLCTPLDYLAKNVSLGAIEPGDIVFISNVGAY 370 Query: 327 NINRKN--WFNGINMPTIAVKNVDG 349 + + F +P + Sbjct: 371 GLT-GSLLGFLSREIPNELIIKNQE 394 >gi|188578044|ref|YP_001914973.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188522496|gb|ACD60441.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 398 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 100/355 (28%), Gaps = 31/355 (8%) Query: 21 ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79 + + A +L A K A + TL ++DG ++S E+ H + + Sbjct: 41 WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWLHAQQPQAPLLFGGP 100 Query: 80 AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPS---VSYSKFILAD 135 D E+ + D + ++S+L + A + + + + + L Sbjct: 101 GKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLMM 160 Query: 136 PNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188 P G D + + G FH + ++ + Sbjct: 161 GGHPSP-FGLDPDDLDAAMQLLRASPSLRLEGFHFHLMSHQRDAAAQLQLIAAYLRTVQR 219 Query: 189 FITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIV 238 + ++ GGG + FC L ++ ++ LEPG + Sbjct: 220 WRHTYALGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVS 279 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT-------AM 291 + VLD+ + + H G T Sbjct: 280 ASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRVLRGARTPVLRDTPVT 339 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345 + G+ C D+ + GD ++F Y + F P + Sbjct: 340 LVGQLCTPKDVLARDQSVAALAPGDCLAFPLAGAYAWTISHQHFLMHPAPQMVFL 394 >gi|307329724|ref|ZP_07608881.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] gi|306884664|gb|EFN15693.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] Length = 424 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 53/400 (13%), Positives = 99/400 (24%), Gaps = 65/400 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D L + G++L A K A + L ++ G +S EV Sbjct: 19 PAYVYDLTALRAHARAVRDALP-PGLELYYAAKANPAPAVLQALASHITGYEVASGGEVE 77 Query: 65 LGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI---- 118 G A+ K A+ + + +L A+ Sbjct: 78 HVRAAVPGAPLAFGGPGKTEGELRRALTLGVERFHVESEQELRLLAGAAEDAGIPDVDVL 137 Query: 119 ----GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + + PF E + + + G L Sbjct: 138 LRVNLPVAGDELGGAALAMGGRPSPFGLDPEAVERCLPLFAEASPGGGPLRLSGGGGPLR 197 Query: 175 FSAMLKNIEKEF--------------------GHFITQIEWISLGGGIHFTDKDYPVKDF 214 + ++ + +++GGG+ + Sbjct: 198 LRGIHAHLASGLDAPAQVAVAAAIADWAAKLSERHGLGLTEVNVGGGMGVDYAHPDRRFD 257 Query: 215 CQRLKEFSEKYSVQ-----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269 + +++ + +EPG A+ T VLDI + V H+ Sbjct: 258 WAAYGQGMADLALRHPGLTLRIEPGRALTVYCGWYVTEVLDIKHSGGEAFAVVRGGTHHL 317 Query: 270 PDYLLYQE----------------------------SATIYPNTGPYTAMVCGRSCLAGD 301 Q P + G+ C D Sbjct: 318 RTPATKQHDQPFQVLPMDAGDAGDAGDTGDTGDTWTRPWARPAVRAEPVTLVGQLCTPKD 377 Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMP 340 + V++GDR++F Y N + F P Sbjct: 378 VLASRVPVAEVRVGDRVAFAMAGAYAWNISHHDFLMHPRP 417 >gi|154253335|ref|YP_001414159.1| Orn/DAP/Arg decarboxylase 2 [Parvibaculum lavamentivorans DS-1] gi|154157285|gb|ABS64502.1| Orn/DAP/Arg decarboxylase 2 [Parvibaculum lavamentivorans DS-1] Length = 382 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 111/344 (32%), Gaps = 14/344 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEV 63 P + I L + + +L A KC + L+ ++S+ E+ Sbjct: 25 PVFCIFPDILKTRARSFVEGFPGT---VLYATKCNPHPYVLKALSDAGIHHFDTASISEI 81 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E +N K ++ I V ++ I + + Sbjct: 82 AKVTELLPEAHCYFNHPVKGRGALEAAADVYGITDYVVDHPDELDKVISIAGTDITIEVR 141 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-NGLMFHNNCENKSFLCFSAMLKNI 182 + K + + + E+ + + FH + F ++ Sbjct: 142 IATPKGKVVYDLSAKFGAAPEGAVTLLKEASRRGCRTAIAFHVGSQCLDPDAFRVAMEMA 201 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKY--SVQIYLEPGEAIV 238 + ++E++ +GGG K P++ + + E+ V ++ EPG A+V Sbjct: 202 MRVAEEAGVKLEYLDVGGGFPAIYKSNVPPLQTYFDTIAAARERLGIEVPLFAEPGRALV 261 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY----TAMVCG 294 ++ T V + + + + D L + + + G Sbjct: 262 AEACSVLTQVHLRKGDDLYINDGIYGCLSEIRDGDLDPPVRALTKDGKVEGELRPFRIFG 321 Query: 295 RSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 +C + D+ F+ + ++ GD + F + Y+I + FNG Sbjct: 322 PTCDSLDVLKLPFYLPENIREGDWVEFGLMGAYSIGMQTGFNGF 365 >gi|325924786|ref|ZP_08186222.1| diaminopimelate decarboxylase [Xanthomonas perforans 91-118] gi|325544802|gb|EGD16149.1| diaminopimelate decarboxylase [Xanthomonas perforans 91-118] Length = 398 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 104/358 (29%), Gaps = 31/358 (8%) Query: 21 ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79 + + A +L A K A + TL ++DG ++S E+ H + + Sbjct: 41 WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWLHAQQPQAPLLFGGP 100 Query: 80 AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPS---VSYSKFILAD 135 D E+ + D + ++S+L + A + + + + + L Sbjct: 101 GKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLMM 160 Query: 136 PNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188 +P G D + + + G FH +S ++ + Sbjct: 161 GGQPSP-FGLDPSDLDAAIRRVQANPSLRLEGFHFHLMSHQRSAAAQLHLVAAYLRTVQQ 219 Query: 189 F-----ITQIEWISLGG---GIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIV 238 + + + + GG D + FC L ++ ++ LEPG + Sbjct: 220 WRQTYALGPLRVNAGGGFGVDYRAPDASFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVS 279 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG-------PYTAM 291 + VLD+ + V H G Sbjct: 280 ASCGWYLMEVLDLKRSHGAWFAVARGGTHHFRTPAAQAHDHPFRVLRGTRTPVISDTPVT 339 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVD 348 + G+ C D+ + GD ++F Y N + F P + Sbjct: 340 LVGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFLTEG 397 >gi|296114391|ref|ZP_06833045.1| ornithine decarboxylase [Gluconacetobacter hansenii ATCC 23769] gi|295979152|gb|EFG85876.1| ornithine decarboxylase [Gluconacetobacter hansenii ATCC 23769] Length = 376 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 106/367 (28%), Gaps = 32/367 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP ++D ++ ++ A+K A + D L ++S E+ Sbjct: 16 TPCLVVDVDRVEERYSALHAALPL--ARIYYAVKANPAAAILDRLVGLGSAFDAASWEEI 73 Query: 64 MLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + ++ A + D F+ +L K A L Sbjct: 74 QMCLRAGAAPQDISFGNTVKKVSAIAQAYEAGIDMFAFDCAEELEKLARHAPGARVYCRL 133 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + + + + + GL FH + + A + Sbjct: 134 IVENEGADWPLSRKFGTTLDNARDLMLR--ARDMGMDPYGLSFHVGSQQTETGAYEAAIA 191 Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYL 231 + F ++ ++LGGG +D + E ++ + Sbjct: 192 RVGMLFTDLKAAGLELRMVNLGGGFPIRYRDDVPGIDRFALAISHAMTEHFGNDLPEMIV 251 Query: 232 EPGEAIVTNTTTLNTTVL---------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 EPG IV + +++ V+ + ++ E + Sbjct: 252 EPGRFIVGDAGVVSSEVVLVSRRGINDGVRWVYLDIGRFGGLAETEGEAIRYGIRTPHDG 311 Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINR-KNWFNGI- 337 TGP + G +C DI E ++ ++ GDR+ Y FNG+ Sbjct: 312 MATGP--VAIAGPTCDGADIMYEKTPYNLPLGLESGDRVELLSTGAYVSTYCSTGFNGLA 369 Query: 338 NMPTIAV 344 + + Sbjct: 370 PLSEHYI 376 >gi|66819325|ref|XP_643322.1| group IV decarboxylase [Dictyostelium discoideum AX4] gi|60471373|gb|EAL69333.1| group IV decarboxylase [Dictyostelium discoideum AX4] Length = 431 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 61/398 (15%), Positives = 125/398 (31%), Gaps = 43/398 (10%) Query: 7 YL--IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 Y+ + + A K A+KC + + G +S E+ Sbjct: 34 YVMLYNLDEFRALAKEACDNLKGLQTM---AVKCNPVMSLMKEAIKAGLGAEVASFGELR 90 Query: 65 LG-HEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI---- 118 + F + + E++ L+ I + +L + K K+ Sbjct: 91 IAEIAGFEPSKIIFDSPIKTKKELEYALNLGVVINIDNFEELETIESIVSKFSKEKYESL 150 Query: 119 --GLRINPSVSYSKFILADPNRPFSRLGEKCKD---KIESEIKN--VNGLMFHNNCE--- 168 G+R+NP V K P S+ G + I++ ++N + G+ H + Sbjct: 151 SLGIRVNPQVGAGKLTDLSTGVPTSKFGIGIEHKDKIIDAYVRNKFLKGVHIHVGSQGFE 210 Query: 169 ---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEF 221 L +QI + ++GGG+ + + +K+ Sbjct: 211 ISNISESAVKVMNLVKEINARDDTKSQITFFNMGGGLSVNFESEETSPTFTQYANHMKQL 270 Query: 222 SEKYSVQIYL---EPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQ- 276 + +L E G + + +TV + + + I + ++ + Sbjct: 271 LPELFNGEFLLITEFGRSYWAKCGVVVSTVEYTKSSGDREIAICHAGANMYIRTVYQFPL 330 Query: 277 ESATIYPNTGPYTA--------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + + G C A D+ + P+K D I D Y + Sbjct: 331 WRIRVTIFDSNGEYKTGNEKITDIAGPCCFAADVLVKERLLPPIKKDDFIMAHDSGAYML 390 Query: 329 NRKNWFNGINMPTIAVKN-VDGTIKAIRE-FSYNDYYN 364 + + +N P I N + TI+ I++ + D N Sbjct: 391 SSYSHYNLRLAPPIFSFNTTNNTIELIKKGETIEDKIN 428 >gi|73974237|ref|XP_858697.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 9 [Canis familiaris] Length = 434 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 111/358 (31%), Gaps = 18/358 (5%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ I +K +KC + + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + +++ K + K+ L I Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKIGVNTMTCDNEVELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G F + + +GGG + V L F E ++I EPG V Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEA--------HVPDYLLYQESATIYPNTGP-YT 289 ++ TL ++ E + + D E Y P +T Sbjct: 278 SSAFTLAVNIIAKKELHDEPAFMYYMNDGIYGSFASKLSEDLNTIPEVHKKYKKDEPLFT 337 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 + + G SC D E + +GD + F+++ +++ + FN P I Sbjct: 338 SSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAFNDFQRPAIYYMMS 395 >gi|178057321|ref|NP_001116665.1| arginine decarboxylase [Sus scrofa] gi|170780176|gb|ACB37315.1| arginine decarboxylase [Sus scrofa] Length = 460 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 116/358 (32%), Gaps = 33/358 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++L D ++ +++ V+ A+KC ++ G+ L + G + ++ E+ L Sbjct: 41 FFLADLGAVVR--KHFYFLKCLPRVRPFYAVKCNSSPGVLKVLAELGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H Y K + + + +++ K K+ L I Sbjct: 99 VQHIGVPTSKIIYANPCKQIAQIKYAAKHGVQLLSFDNEMELAKVVKSHPSAKMVLCIAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 159 DDSHSLSHLSFKFGASLKSCRHLLENAKRNHMEVVGVSFHIGSGCPDPQAYAQSIADARL 218 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG + + + F E + I + G Sbjct: 219 VFEMGAELGHRMHILDLGGGFPGVEGAKVRFEEIASVINSALDLYFPEGCGIDILAKLGR 278 Query: 236 AIVTNTTTLNTTVL-------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288 VT+ TL +++ D + ++ H+ + + ++ ++ NT P Sbjct: 279 YYVTSAFTLAVSIIAKKEVLLDQPGREEETGSAPKTIVYHLGEGVYGIFNSVLFDNTCPT 338 Query: 289 TA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + G D E + + +GD + FE++ Y + + Sbjct: 339 PVLPKKPSPEQPLYSSSLWGPVVDGCDCVAEGLWLPSLHVGDWLVFENMGAYTVGMGS 396 >gi|119485296|ref|XP_001262180.1| ornithine decarboxylase, putative [Neosartorya fischeri NRRL 181] gi|119410336|gb|EAW20283.1| ornithine decarboxylase, putative [Neosartorya fischeri NRRL 181] Length = 413 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 45/348 (12%), Positives = 101/348 (29%), Gaps = 31/348 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+++ D +++ V A+KC + L G +S+ E+ Sbjct: 31 PFFVADLGQVIRQHRRWR--VNLPDVHPFYAVKCNPDPNLLKLLANLGTGFDCASIEELR 88 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + K + + + + ++ LRI Sbjct: 89 TVLSLGVDPCRIIFANPCKSASSLVFAARTGVTRTTFDNLDELDTIRTFLPNAELVLRIY 148 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S + L + + +V G+ FH + + +++ + Sbjct: 149 ASDSDALIDLGEKFGATVEASLPLLQRARELGLDVCGVSFHVGTGASNASAYVNAIRHAK 208 Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 FG+ + + +GGG + + LKE V++ EPG V + Sbjct: 209 IVFGYGKSLGFDMNLLDIGGGFQDCNLEDIACTLRPMLKEEF-PSGVRLLAEPGRYYVRS 267 Query: 241 TTTLNTTVLDISENIKNLVIVDSSV-----------------EAHVPD------YLLYQE 277 TL +L +I + + V + + Sbjct: 268 AYTLACKILSRRRHIGTDDHDRPDMLYQNDGVYGNFMNVLIEKETVRPSLVAYTWPFHSH 327 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVA 324 + + G +C + D + ++IGD + ++++ Sbjct: 328 GNDTRRKLEEHRYTIWGPTCDSMDCVAKDVPMTSEIRIGDWLKYKNMG 375 >gi|323343102|ref|ZP_08083333.1| hypothetical protein HMPREF0357_11514 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463166|gb|EFY08361.1| hypothetical protein HMPREF0357_11514 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 390 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 62/382 (16%), Positives = 119/382 (31%), Gaps = 27/382 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTP Y+ D L ++ N KL A+K + L++ +D S Sbjct: 13 LKTPCYIFDVDFLEEHVKEIKASLPN-NTKLCYAMKANPF--LVGILDKMVDSFEVCSPG 69 Query: 62 EVMLG-HEKFGGETHAYNVAY---KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E + + Y +D + ++ QL D + + K+ Sbjct: 70 EYRICQRNNISNLKIILSGVYKNSEDIREIIQMEEQPIYTVESMKQLELLNDLSTEYQKQ 129 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-FHNNCENKSFLCFS 176 I + + S R+ ++ + + + NK Sbjct: 130 INVILRL---TSGNQFGMDASEIERVLDQTNRYRFIKWHGIQLYSGTQKHKLNKVLGEIE 186 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---YSVQIYLEP 233 ++ IE + + + G G+ + + Y I LE Sbjct: 187 SLKSYIETLRSRYQISLPCLEFGPGLGVQYFESDKPTLSVSEFSSVLRSLNYDGTIVLEM 246 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-----LLYQESATIYPNTGPY 288 G IV T T V+DI N + HV Y + + P Sbjct: 247 GRIIVAACGTYLTRVVDIKTNDMKHYAILDGGIHHVSYYGQFLGMKCPSIERVDMEKSPE 306 Query: 289 ---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAV 344 +CG C D+ + + + + D ++F++V Y+I + F ++P + + Sbjct: 307 LHAQWNLCGSLCTVADVLIKDYETP-LALNDVVAFKNVGAYSITEGISLFLSRDLPQVNL 365 Query: 345 KNVDGTIKAIREFSYNDYYNNL 366 I+ IR + + L Sbjct: 366 YRKQTGIEIIR-DTIE--IDRL 384 >gi|209965013|ref|YP_002297928.1| lysine [Rhodospirillum centenum SW] gi|209958479|gb|ACI99115.1| lysine [Rhodospirillum centenum SW] Length = 415 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 99/364 (27%), Gaps = 23/364 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYE 62 P + + L + A G +L A+KC + L + +S E Sbjct: 38 PLHCLRPAVLKATARRFVAAFTEAVGGDVLYAVKCNPDPAVLRALWKGGVRHFDCASPAE 97 Query: 63 VMLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---AQKLHK 116 V + F Y + ++V +L K +++ A+ L Sbjct: 98 VRVVRSMFPEAVIHYMHPVKNRAAIRVAYRELGVRDFALDSVEELAKLREETGDARDLGL 157 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + L + + P + G + + S V FH + + + Sbjct: 158 IVRLALPKGNATYDLSGKFGAAPDAAAGLLRRARALSPRIGV---CFHVGSQCLTPDSYG 214 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 L+ ++ + +GGG + D ++ + Sbjct: 215 DALRLAGGVIRASGVPVDVVDVGGGFPVSYPDMTPPPLDAYMEAIRAGIAGLGLPAGTRV 274 Query: 237 IVTNTTTLNTT----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 L V+ + + + + V+ V + D + Sbjct: 275 WCEPGRALVAAGSSVVVQVEKRRGDELFVNDGVYGSLSDAGVPAFRFPCRLVRPAGTDTA 334 Query: 288 --YTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 G +C + D G F V+ GD I + Y + FNG + + Sbjct: 335 PLMPFSFWGPTCDSADRMKGPFLLPADVREGDWIEIGQLGAYGATLRTEFNGFDQARLVE 394 Query: 345 KNVD 348 Sbjct: 395 VADG 398 >gi|302386984|ref|YP_003822806.1| Orn/DAP/Arg decarboxylase 2 [Clostridium saccharolyticum WM1] gi|302197612|gb|ADL05183.1| Orn/DAP/Arg decarboxylase 2 [Clostridium saccharolyticum WM1] Length = 390 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 52/375 (13%), Positives = 116/375 (30%), Gaps = 33/375 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+Y+ D L + + + V+L A+K + + ++ S E Sbjct: 14 QTPFYIFDTDVLALQIRKIRDVL-GSDVELCYAMKANPF--VIRDIEGLVESFEVCSPGE 70 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV----LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 + + E + YK E N ++S +++L Sbjct: 71 LSICERAGIHMEKVVMSGVYKKPEDVEYALKQYGNKIIYTAESLSHWQTLASCSKRLQLP 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + + + + L + E + G+ + + + +S + Sbjct: 131 VRVLLRLTSG-------NQFGMDESLIRQIIAMGAHEFITIEGIQYFSGTQKRSLKKLES 183 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE-----FSEKYSVQ 228 L +E+ + +++ + G G+ + K+ + L + + Sbjct: 184 ELNMLEQFCQELNSEYGFRVKRLEYGPGLPICYFEEEKKEEEEMLNGLAVLLKHRSFEGR 243 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIY 282 I LE G I + + T V D+ N + V Sbjct: 244 ITLEMGRYITASCGSYVTRVADLKTNKGEPYCIVDGGIHQLTYYGQVLAMKKPPILPFHE 303 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN--RKNWFNGINMP 340 VCG C A D+ + + + ++ GD I F+ Y++ F +P Sbjct: 304 RKGEEKKWTVCGSLCTASDVLVKQYPFQDLQPGDPIIFQMAGAYSVTEGMA-LFLSRELP 362 Query: 341 TIAVKNVDGTIKAIR 355 + + + + R Sbjct: 363 QVLLYSAKEHFRIAR 377 >gi|218779264|ref|YP_002430582.1| Orn/DAP/Arg decarboxylase 2 [Desulfatibacillum alkenivorans AK-01] gi|218760648|gb|ACL03114.1| Orn/DAP/Arg decarboxylase 2 [Desulfatibacillum alkenivorans AK-01] Length = 441 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 56/384 (14%), Positives = 118/384 (30%), Gaps = 48/384 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P Y++D L + + A+K + TL G SS E Sbjct: 59 PLYVLDHANLKKHAAMFKNAFGACFSDFACYYAMKSNNHPEVSRTLIDQGFGLDVSSGVE 118 Query: 63 VMLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 V + D + S ++ +++ ++++ A + + Sbjct: 119 VERALALGAEDVIFSGPGKTDKELFLAVENSGRVKVLMDSLGEMDRLNRLAMQAG--KRV 176 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE---NKSFLCFSA 177 R+ ++ + LG K E + GL FH + ++ +A Sbjct: 177 RVGLRITPPSSPWKKFGVALANLGAAWKKAQECPGLEIQGLQFHTSWNLDPSQQVRTIAA 236 Query: 178 MLKNIEKEFGHFITQIEWISLGGGI-------------------------------HFTD 206 + + I + + ++++ +GGG H+ Sbjct: 237 IGREIGQWSPEMLGALKFLDIGGGYWPQAGEWQVHAVTQAGQVMKLAGLDVDRPLEHYYA 296 Query: 207 KDYPVKDFCQRLKEFSEKY-----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV 261 + F Q L + E + +I +EPG + L V+D + + Sbjct: 297 PAQSLDVFAQSLYQAVETHIFSTVPCRICMEPGRWLCNGAMHLLLNVVDKKDGGLVITDA 356 Query: 262 DSSVEAHVPDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 ++ + Y + A + G C D++G ++ + ++ GD + Sbjct: 357 GTNAIGWERYEMDYAPVLNLSRPALDEKACEIMGSLCTPHDLWGLSYWGQDIQPGDVLLI 416 Query: 321 EDVAGYNINRKNWFNGINMPTIAV 344 D Y + K F I P + Sbjct: 417 PDQGAYTYSLKQDF--IKAPPRVI 438 >gi|294813014|ref|ZP_06771657.1| Lysine/ornithine decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294325613|gb|EFG07256.1| Lysine/ornithine decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 437 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 110/389 (28%), Gaps = 41/389 (10%) Query: 8 LIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 L+D + + A V A+K + LN G +S E+ Sbjct: 28 LLDVAGIKASATALKEAFAGVTEAPVLHAFAVKAAPLVPVVALLNGEGIGAEVASPGELA 87 Query: 65 LGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---AQKLHKKIG 119 + + A E+ L + + +L++ + +G Sbjct: 88 IARAAGVPAARTVLDSPAKTVRELREALDLGIALNADNPQELSRIDALLAETDGVRSPVG 147 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE--- 168 +RIN V S+ G +D ++ + + L H+ + Sbjct: 148 VRINAQVGAGAIGALSTATATSKFGVALRDPGARAAVVRMFLDRPWLTRLHTHSGSQGVP 207 Query: 169 -NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 + + E+ QI+ + +GGG+ ++ Sbjct: 208 LARMTEGVRELYALAEEINAAAGRRQIDTLDIGGGLPVNFASDETTPTFAEYAALLKREV 267 Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDIS----ENIKNLVIVDSSVEAHVPDYLLY 275 + E G A++ T+ V I V D + + Sbjct: 268 PGLLDGRYALVTEYGRALLAKHGTILARVEYTKVSGGRPIAVTHAGVQVATRTVYDPVSW 327 Query: 276 QESATIYPNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 Y G P + G +C AGD+ E P+ GD ++ D Y + Sbjct: 328 PLRIAAYGPDGHPKTGAPVPQDIAGPACFAGDLLAEARELPPLDQGDVVAALDTGAYCFS 387 Query: 330 RKNWFNGINMPTIAVKNVDG---TIKAIR 355 +N + P + D + +R Sbjct: 388 NHYGYNSLPRPGVYGYTADATAVDFRLVR 416 >gi|326441439|ref|ZP_08216173.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 413 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 110/389 (28%), Gaps = 41/389 (10%) Query: 8 LIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 L+D + + A V A+K + LN G +S E+ Sbjct: 4 LLDVAGIKASATALKEAFAGVTEAPVLHAFAVKAAPLVPVVALLNGEGIGAEVASPGELA 63 Query: 65 LGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---AQKLHKKIG 119 + + A E+ L + + +L++ + +G Sbjct: 64 IARAAGVPAARTVLDSPAKTVRELREALDLGIALNADNPQELSRIDALLAETDGVRSPVG 123 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE--- 168 +RIN V S+ G +D ++ + + L H+ + Sbjct: 124 VRINAQVGAGAIGALSTATATSKFGVALRDPGARAAVVRMFLDRPWLTRLHTHSGSQGVP 183 Query: 169 -NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 + + E+ QI+ + +GGG+ ++ Sbjct: 184 LARMTEGVRELYALAEEINAAAGRRQIDTLDIGGGLPVNFASDETTPTFAEYAALLKREV 243 Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDIS----ENIKNLVIVDSSVEAHVPDYLLY 275 + E G A++ T+ V I V D + + Sbjct: 244 PGLLDGRYALVTEYGRALLAKHGTILARVEYTKVSGGRPIAVTHAGVQVATRTVYDPVSW 303 Query: 276 QESATIYPNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 Y G P + G +C AGD+ E P+ GD ++ D Y + Sbjct: 304 PLRIAAYGPDGHPKTGAPVPQDIAGPACFAGDLLAEARELPPLDQGDVVAALDTGAYCFS 363 Query: 330 RKNWFNGINMPTIAVKNVDG---TIKAIR 355 +N + P + D + +R Sbjct: 364 NHYGYNSLPRPGVYGYTADATAVDFRLVR 392 >gi|254392330|ref|ZP_05007514.1| lysine/ornithine decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|197706001|gb|EDY51813.1| lysine/ornithine decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 448 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 110/389 (28%), Gaps = 41/389 (10%) Query: 8 LIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 L+D + + A V A+K + LN G +S E+ Sbjct: 39 LLDVAGIKASATALKEAFAGVTEAPVLHAFAVKAAPLVPVVALLNGEGIGAEVASPGELA 98 Query: 65 LGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---AQKLHKKIG 119 + + A E+ L + + +L++ + +G Sbjct: 99 IARAAGVPAARTVLDSPAKTVRELREALDLGIALNADNPQELSRIDALLAETDGVRSPVG 158 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE--- 168 +RIN V S+ G +D ++ + + L H+ + Sbjct: 159 VRINAQVGAGAIGALSTATATSKFGVALRDPGARAAVVRMFLDRPWLTRLHTHSGSQGVP 218 Query: 169 -NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225 + + E+ QI+ + +GGG+ ++ Sbjct: 219 LARMTEGVRELYALAEEINAAAGRRQIDTLDIGGGLPVNFASDETTPTFAEYAALLKREV 278 Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDIS----ENIKNLVIVDSSVEAHVPDYLLY 275 + E G A++ T+ V I V D + + Sbjct: 279 PGLLDGRYALVTEYGRALLAKHGTILARVEYTKVSGGRPIAVTHAGVQVATRTVYDPVSW 338 Query: 276 QESATIYPNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329 Y G P + G +C AGD+ E P+ GD ++ D Y + Sbjct: 339 PLRIAAYGPDGHPKTGAPVPQDIAGPACFAGDLLAEARELPPLDQGDVVAALDTGAYCFS 398 Query: 330 RKNWFNGINMPTIAVKNVDG---TIKAIR 355 +N + P + D + +R Sbjct: 399 NHYGYNSLPRPGVYGYTADATAVDFRLVR 427 >gi|166713024|ref|ZP_02244231.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 398 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 100/354 (28%), Gaps = 29/354 (8%) Query: 21 ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79 + + A +L A K A + TL ++DG ++S E+ H + + Sbjct: 41 WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWLHAQQPQAPLLFGGP 100 Query: 80 AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138 D E+ + D + ++S+L + A + + + + +++ Sbjct: 101 GKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLTM 160 Query: 139 PFS--RLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF 189 G D + + G FH + ++ + + Sbjct: 161 GGHPSPFGLDPDDLDAAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLQLIAAYLRTVQRW 220 Query: 190 ITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVT 239 ++ GGG + FC L ++ ++ LEPG + Sbjct: 221 RHTYALGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVSA 280 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT-------AMV 292 + VLD+ + + H G T + Sbjct: 281 SCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRVLRGARTPVLRDTPVTL 340 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345 G+ C D+ + GD ++F Y + F P + Sbjct: 341 VGQLCTPKDVLARDQSVAALAPGDCLAFPLAGAYAWTISHQHFLMHPAPQMVFL 394 >gi|297665628|ref|XP_002811146.1| PREDICTED: LOW QUALITY PROTEIN: arginine decarboxylase-like [Pongo abelii] Length = 461 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 115/359 (32%), Gaps = 37/359 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L Q G + ++ E+ L Sbjct: 41 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H K + + + +++ K K+ L I Sbjct: 99 VQHIGVPASKIICANPCKQIAQIKYAAKHGIRLLSFDNEMELAKVVKSHPSAKMVLCIAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 159 DDSHSLSRLSLKFGVSLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218 Query: 185 EFG---HFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 F ++ + LGGG T+ ++ F E V I+ E G Sbjct: 219 VFEMGTELGHKMHILDLGGGFPGTEGTKVRFEEIASMINSALDLYFPEGCGVDIFAELGR 278 Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272 VT+ T+ ++ + I +S + ++ Sbjct: 279 YYVTSAFTVAVSITAKKEVLLDQPGREEENGSTRKTIVYHLDEGVYGIFNSVLFDNICPI 338 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + Q+ + Y++ + G + D E + + +GD + F+++ Y + Sbjct: 339 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMG 395 >gi|289617669|emb|CBI61392.1| unnamed protein product [Sordaria macrospora] Length = 483 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 54/384 (14%), Positives = 100/384 (26%), Gaps = 56/384 (14%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + VK A+KC + L G +S E+ Sbjct: 83 FFVADLGEVYR--QHLRWKLNLPRVKPFYAVKCNPDDRLLRLLAALGTGFDCASKAEIEQ 140 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 Y K + F+ +L K + + Sbjct: 141 VLRMGVDPSRIIYAQPCKTNSYVRYVAQQGVRQMTFDNADELRKIARLYPDAELFLRILT 200 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S S + L S G +V G+ FH F +++ Sbjct: 201 DDSSSLCRLSLKFGASLDSTDG--LLGLARQLGLSVVGVSFHVGSGASDPTAFLKAVQDA 258 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237 F + ++ + +GGG D + + F V + EPG Sbjct: 259 HVVFQQAAAYGYNLKTLDVGGGFCSDDTFEQMASVLRAALDEYFPAHTGVNLIAEPGRYY 318 Query: 238 VTNTTTLNTTVLD---------------------------------ISENIKNLVIVDSS 264 ++ TL ++ + N S Sbjct: 319 ASSAFTLACNIIARRTIQDGSAVSVSDSSSSMSDDGSMNNGDASYMVYVNDGLYGNFSSI 378 Query: 265 VEAHVPDY----------LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VK 313 + H + +A + + G +C D E + + Sbjct: 379 MFDHQHPVAKILRAGGRTMYDSVAAHESASEDAIEYSIWGPTCDGIDRITESIRFREILD 438 Query: 314 IGDRISFEDVAGYNINRKNWFNGI 337 +GD + FED+ Y FNG Sbjct: 439 VGDWLYFEDMGAYTKCSATTFNGF 462 >gi|73949907|ref|XP_535320.2| PREDICTED: similar to ornithine decarboxylase-like protein isoform 1 [Canis familiaris] Length = 460 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 116/363 (31%), Gaps = 35/363 (9%) Query: 6 YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 +++ D + + + V+ +KC ++ G+ L + G + ++ E+ Sbjct: 41 FFVADLGAVVRKHFCLLKCL---PRVRPFYTVKCNSSPGVLKVLAELGLGFSCANKAEME 97 Query: 65 LG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L Y K + + + +++ K K+ L I Sbjct: 98 LVQRIGVPASKIVYANPCKQIAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA 157 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S+S L+ + + + V G+ FH ++ + + Sbjct: 158 TDDSHSLSHLSFKFGASLKSCRHLLENAKRSHVEVVGVSFHVGSGCPDLHAYTQSIADAR 217 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPG 234 F ++ + LGGG + + + F E V I G Sbjct: 218 LVFEMGAELGHRMHILDLGGGFPGLEGAKVRFEEIATVINSALDLYFPEGCGVDILARLG 277 Query: 235 EAIVTNTTTLNTTVL-------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 VT+ TL +++ D + ++ H+ + + ++ ++ NT P Sbjct: 278 RYYVTSAFTLAVSIIAKKEVLLDQPGREEETGSTPKTIVYHLGEGVYGIFNSVLFDNTCP 337 Query: 288 --------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 Y++ + G D E + + +GD + FE++ Y + + Sbjct: 338 TPILQKKSSTEQPLYSSSLWGPVADGSDCVAEGLWLPQLHVGDWLVFENMGAYTVGMGSL 397 Query: 334 FNG 336 F G Sbjct: 398 FGG 400 >gi|300787405|ref|YP_003767696.1| ornithine decarboxylase [Amycolatopsis mediterranei U32] gi|299796919|gb|ADJ47294.1| ornithine decarboxylase [Amycolatopsis mediterranei U32] Length = 536 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 109/371 (29%), Gaps = 32/371 (8%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 + D + L + V + A+K + L + G ++S E+ L Sbjct: 14 VYDLTGIERQYHALLD--ELPDVSVRFAVKACPHPAVLACLARVGAGFDAASPGEIELTL 71 Query: 68 --EKFGGETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + H N D +I A S T + V + A H + Sbjct: 72 RNGALPDDVHYGNTVKSDADIAAAHSLGITTFATDCVQDVRAIARHAPGAHVFCRVTTTG 131 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK---N 181 + L +G + + + GL H + + + L Sbjct: 132 DGALW--PLTGKCGSDDAVGVLTEARRLGLVPA--GLSIHVGSQQMTASAWRQALDTLVA 187 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSV-----Q 228 + Q+ ++LGGG+ P + ++E + + Sbjct: 188 LVTSLAAQGIQLGHVNLGGGLPAHGYLSKDGVPLVPPTGEIFTAIREGMGRLREAGGRLR 247 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG-- 286 +EPG +V + T+ V ++ + + + + + + T G Sbjct: 248 FLVEPGRHLVADHGTIRAHVARLTSRGRRWLYLSCGKFNGLYETDQVRYRLTFPGQAGGA 307 Query: 287 PYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNG-INMPTI 342 AMV G +C + D F G + GD + Y I FNG +P + Sbjct: 308 EVPAMVAGPTCDSDDSFGGGPVVVPADLASGDPVWIHSTGAYAIGYTTVGFNGFRPLP-V 366 Query: 343 AVKNVDGTIKA 353 + Sbjct: 367 LAVRTEKIRPI 377 >gi|126330250|ref|XP_001366754.1| PREDICTED: hypothetical protein isoform 1 [Monodelphis domestica] Length = 456 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 114/357 (31%), Gaps = 34/357 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 T +++ D ++ +++ V+ +KC ++ G+ L + G + ++ E Sbjct: 35 GTSFFVADLGDVVK--KHLRFLKNLPRVRPFYVVKCNSSPGVLRALAELGLGFSCANKAE 92 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + L Y K + + + +++ K ++ LR Sbjct: 93 MELLRHIGVPAHKIIYTSPCKQAAQVKQAARLGIRMLSFDNEVELAKVARSHPTARMVLR 152 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN----KSFLCFSA 177 I S S L+ + + + V G+ FH ++F A Sbjct: 153 IATDDSCSPARLSMKLGATLKSCRHLLETAKKMNMEVVGVSFHVGSGCSSDPQAFTQSIA 212 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYL 231 + + + ++ + LGGG T+ ++ F E V I Sbjct: 213 DARLVFEMGTELGYRMHILDLGGGFPGTEDSKVRFEEMASVINSALDMYFPEGCGVDILA 272 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-------HVPD--------YLLYQ 276 EPG V + TL ++ E + +D A H+ + Sbjct: 273 EPGRYYVASAFTLAVRIVAKKEVPSDQTGLDEEDGASPKSIVYHISEGVYGAFNCVFFDN 332 Query: 277 ESATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 P Y++ + G +C D E +++GD + FE++ Y Sbjct: 333 ACPMPILQKKPSPDQRVYSSSLWGPTCDDLDHVAEGLCLPELQLGDWLIFENMGAYT 389 >gi|242045640|ref|XP_002460691.1| hypothetical protein SORBIDRAFT_02g033250 [Sorghum bicolor] gi|241924068|gb|EER97212.1| hypothetical protein SORBIDRAFT_02g033250 [Sorghum bicolor] Length = 429 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 104/358 (29%), Gaps = 30/358 (8%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 +++ K+ + GV A+KC + L G +S E+ Sbjct: 60 VLNLSKVAELFSAWRRGLE--GVPPYYAVKCNPNPALLGALAALGAGFDCASPAEMDAVL 117 Query: 68 E-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K D F++V +++K + + + L++ Sbjct: 118 ALGVPADRIIYANPCKPESHIQHAASVGVDLTTFDSVEEVDKLRRFHPRCRLLLRLKVPD 177 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + L +S V+G+ FH + A ++ Sbjct: 178 AAGGALLDLGTKYGARQEEVAPLLRAAQSAGLAVSGVAFHVGSAVSRVGVYDAAVEAARA 237 Query: 185 EFG-----HFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSV--QIYLEPGE 235 F + + + +GGG D + F + Q+ EPG Sbjct: 238 VFDAAAATRGMPPMRVLDIGGGFTAAATFQDACDVINSALARHFGDDLLPGLQVIGEPGR 297 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV------DSSVEAHV-----PDYLLYQESATIYPN 284 TL V + + H+ + + A + Sbjct: 298 YFAETPFTLAARVFGKRTRGEVREYWIDDGLFGTLCCVHMENYVPRPVPVLRRRAAGDDD 357 Query: 285 -----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + + V G + + D+ + + ++IGD + F DV Y FNG Sbjct: 358 DEGDESETHPSTVFGPTLDSFDVVVKGYHLPELRIGDWLVFHDVGAYTTALSCDFNGF 415 >gi|332185694|ref|ZP_08387441.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Sphingomonas sp. S17] gi|332014052|gb|EGI56110.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Sphingomonas sp. S17] Length = 404 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 47/373 (12%), Positives = 94/373 (25%), Gaps = 34/373 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + A + + L A+K + + +DG +S E+ Sbjct: 35 PLFVYDPA--IVAARVARFRAAFPTIDLHYAIKANPFPPLLAAMAGLVDGFDVASSGELA 92 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E G +D E+ A + T+ + + + A++L + L + Sbjct: 93 KVVE-LGKPVSFAGPGKRDAELAAAIDAGITLNLESEGEATRGLAIAERLGRTPRLAVRV 151 Query: 125 SVS-YSKFILADPNRPFSRLGEKCKDKIESEIKNV------NGLMFHNNCENKSFLCFSA 177 + + S G V G + + Sbjct: 152 NPDVELRGSGMKMGGRPSPFGIDAARVPALVRTIVASGAEWRGFHIYAGSQALDPQAIID 211 Query: 178 MLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------- 224 + ++LGGG +++ + Sbjct: 212 TQAATIALAARLAEEAGHTPPLVNLGGGFGVPYFAGDQSLDIEQVGTALTQALEARPDIL 271 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LL 274 + +E G +V V+DI ++ + H Sbjct: 272 RDTRFAIELGRWLVAEAGVYMAHVVDIKDSGGERFAILDGGLNHQLAASGNFGTVVRRNY 331 Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NW 333 A T V G C D G+ V +GD ++ Y + + Sbjct: 332 PLALAHAMGAEAIQTVSVVGPLCTPLDRLGDRVALPAVHVGDIVAIFLAGAYGASASPSA 391 Query: 334 FNGINMPTIAVKN 346 F G + Sbjct: 392 FLGHGPADEILAR 404 >gi|253581243|ref|ZP_04858499.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847444|gb|EES75418.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 399 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 57/392 (14%), Positives = 118/392 (30%), Gaps = 42/392 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG---TTSSS 59 TP Y+ D K+ + + +L A+K MD S Sbjct: 17 PTPAYVFDLDKMKEFVKKVQSCLGES-AQLCYAMKANPFLT-----GPMMDVVPTFEVCS 70 Query: 60 LYEVMLG-HEKFGGETHAYNVAYKDCEIDAV----LSNCDTIIFNTVSQLNKFKDKAQKL 114 E + E + YK+ E ++ L D A +L Sbjct: 71 PGEFRICERVGVPMERIVLSGVYKNPEDMEYVLSTYGGKGVYTVESLQHLQILNDTAVRL 130 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 KI + I + + + D+ + + GL F++ + K Sbjct: 131 GMKITVLIRV------TSGNQFGVDEADIRKIISDRTDYPGVEIEGLQFYSGTQKKDLSQ 184 Query: 175 FSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------K 224 L+++++ G + + + G G + + + Sbjct: 185 MKTELEHLDEFIGELKSESGFEAQVLEYGPGFFVPYFKKDKSEDVENILSEFRALLESLN 244 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----DYLLYQESAT 280 + ++ LE G + T+++D+ N + ++ H+ + Q T Sbjct: 245 FKGKVVLEMGRFLAAACGYYVTSIVDMKVNKEQPYVIMDGGINHLNYYGQAMAMKQPYCT 304 Query: 281 IYPNTG-------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-N 332 G + +CG C D+ + ++ D + FE V Y++ Sbjct: 305 QLDTEGNEKTGGEEESWNLCGALCTVNDVVVKRFPLHKPQLHDILVFERVGAYSVTEGIY 364 Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 F +P I ++ +R+ + D N Sbjct: 365 LFLSRPLPRIYFWTEGEGLRMVRDGVHTDLLN 396 >gi|163739655|ref|ZP_02147064.1| Putative Ornithine decarboxylase [Phaeobacter gallaeciensis BS107] gi|161387114|gb|EDQ11474.1| Putative Ornithine decarboxylase [Phaeobacter gallaeciensis BS107] Length = 383 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 107/358 (29%), Gaps = 23/358 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEV 63 P + L + + + A+K + + + + G +S E+ Sbjct: 23 PILYFSPRVLHEVANRFQHGFPG---LVTYAVKANPHPAVLSNLVAAGITGFDVASPAEM 79 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 YN + A + + + S+L+K D + + Sbjct: 80 DAVRAASPDAVMHYNNPVRSDVEIAAGIAHGVASWSVDEPSELDKLADVPKSCEIAVRFA 139 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + F P + + E + FH + + + + Sbjct: 140 LPVAGAAYDFGSKFGAEPDMAIELLKRVAAEGWTPAL---CFHPGTQCEDESAWVEYVHA 196 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEFSE----KYSVQIYLEPGE 235 ++ +I +++GGG ++ + + + EPG Sbjct: 197 AKRIIDAAGVKIARLNVGGGFAANRDGVAPDLEKVFAAIWVAVDAAFGDDKPGLICEPGR 256 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATI-----YPNTGPY 288 A+V+ + TL + I + + + + D + D L + Sbjct: 257 AMVSESFTLAARIKGIRKAGEVVFLNDGVYGGLVDIRDMGLPGRVEVVAADGTRRGADAQ 316 Query: 289 TAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 +V G +C + D + +IGD + F + Y+ FNG + +A Sbjct: 317 PRVVFGPTCDSLDRLPDGLPLPRDTQIGDYVLFPGLGAYSSAMSTQFNGYGLSDVATV 374 >gi|88857445|ref|ZP_01132088.1| Ornithine decarboxylase [Pseudoalteromonas tunicata D2] gi|88820642|gb|EAR30454.1| Ornithine decarboxylase [Pseudoalteromonas tunicata D2] Length = 386 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 50/374 (13%), Positives = 104/374 (27%), Gaps = 32/374 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+ ++D L + + V ++K +A + + L ++S+ Sbjct: 15 ISTPFLVVDLDVLAHQYRRLVTAM--PNVVCHYSVKSNSARAVLEKLFALGSCFEAASIN 72 Query: 62 EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + K + K ++ Sbjct: 73 EIHACFAAGAKANQIHFGNTIKKISDIETAYQLGVQSYAFDCYEELVKLAQYAPGCRVVC 132 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+ + + L + GL FH + +S + L Sbjct: 133 RLKNDGKGAHWGLCHKFGCSLTEAVDFLSRSVLLGLEPYGLSFHVGSQQQSPDAWHRALV 192 Query: 181 NIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--------- 228 + +I I+LGGG + + EF K + Sbjct: 193 DARWVADELVKQDIKIGLINLGGGYPASGYLNDSDNEVDYSMEFFGKCISESLTAIFGSW 252 Query: 229 -----IYLEPGEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHVPDYLL--YQ 276 EPG ++ + TTV+ +S+ I + +D + + Y Sbjct: 253 SGDLKFICEPGRYLLAEAGVVKTTVILACERMLSDQIHRWLYLDVGKFNGLYEASDIKYP 312 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV----KIGDRISFEDVAGYNINRKN 332 + + ++ G +C + D+ + + +GD + F Y+ + Sbjct: 313 VLHHADQRSDKTSTILTGPTCDSSDMLSYKNHLHHLPFTIAVGDPLMFCCAGAYSNSYSC 372 Query: 333 -WFNGINMPTIAVK 345 FNG Sbjct: 373 KGFNGFEPLAEYYI 386 >gi|332679018|gb|AEE88147.1| Diaminopimelate decarboxylase [Francisella cf. novicida Fx1] Length = 403 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 55/380 (14%), Positives = 107/380 (28%), Gaps = 33/380 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++ D L + + VKL ALK + ++ +S+ E+ Sbjct: 20 PFFYYDLDMLEAHAKELHRL----PVKLWYALKANPLSRIIKVFDEQKISFDVASIGELD 75 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKI--G 119 + + K + +++Q + +K + + Sbjct: 76 QVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSNLVEKKNINVKVL 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171 LR+ + + G D + S ++ G+ Sbjct: 136 LRVQLVWDDQGGNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIGMHCFQWGNILC 195 Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 S + K I K ++ I LGGGI L Sbjct: 196 LNKLSQIWKTITKALLDLSEAINVSLKIIDLGGGIGIPYNSSQKAVSINDLISCINNLKK 255 Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATI 281 ++ +LE G V + T V+DI ++V H+ L + Sbjct: 256 EFPDIEYWLELGRYAVAESGVYITKVVDIKSVNNINLLVTDGGAQHLVRPALTGESFPIE 315 Query: 282 Y----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 + + G C + D G K + + D + F+ Y F Sbjct: 316 LLREESCSETNEFQIHGPLCTSLDNAGIASLPKDIGLNDYLIFKQTGAYGFTESMPFFLC 375 Query: 337 INMPTIAVKNVDGTIKAIRE 356 N+P + G ++ +R+ Sbjct: 376 HNLPAEIIFYK-GHLQTVRQ 394 >gi|84686159|ref|ZP_01014054.1| Putative Ornithine decarboxylase [Maritimibacter alkaliphilus HTCC2654] gi|84665686|gb|EAQ12161.1| Putative Ornithine decarboxylase [Rhodobacterales bacterium HTCC2654] Length = 406 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 106/364 (29%), Gaps = 24/364 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P + L + A+K G+ DTL Q +S E+ Sbjct: 46 PVLYFSPETLAETARRFREGFPG---LVTYAVKANDNPGVIDTLAQVGVTSFDVASPAEI 102 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L E T YN + + ++ + + ++ + + + + Sbjct: 103 ALVREVVPFATLHYNNPVRSIPEIDAAVAAGVASY-SIDGFGELEKLKGRVPQGVEVSVR 161 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSAMLKN 181 ++ F E C D + + + V + FH + + ++ ++ Sbjct: 162 LALPVKGAAYDFG-AKFGEPPEGCVDLLRAVVAAGYVPAMTFHPGTQCEDPAAWARYIET 220 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSEKYSVQIYLEPGEA 236 + + +++GGG + + + + EPG A Sbjct: 221 CGEISRKAGVPLARLNVGGGFPSDRGTGARLEPIFAEIARAVAGAFGDTQPHLVCEPGRA 280 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--------PNTGPY 288 +V +L V I + + + + + + + P Sbjct: 281 MVAEAFSLAVRVKAIRGCGSLFL--NDGIYGLLAEVPIMGPYGRMRVVAPDGTPRRGAPS 338 Query: 289 TAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 ++ G +C + D GE + GD + F+ + Y+ FNG I Sbjct: 339 PRVLYGPTCDSLDRLPGEVALPADLCEGDVLIFDGMGAYSTATNTRFNGYGAHEIVTVRR 398 Query: 348 DGTI 351 G Sbjct: 399 GGHR 402 >gi|119385052|ref|YP_916108.1| Orn/DAP/Arg decarboxylase 2 [Paracoccus denitrificans PD1222] gi|119374819|gb|ABL70412.1| Orn/DAP/Arg decarboxylase 2 [Paracoccus denitrificans PD1222] Length = 387 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 107/359 (29%), Gaps = 21/359 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P + L L + A+K + TL+ G +S YE+ Sbjct: 30 PVMVFAPSVLRAAAQRFLQGFPG---LVTYAVKSNPDEAVIRTLSAAGVKGFDVASPYEI 86 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121 L Y+ + A ++ S+L+K + + +I R Sbjct: 87 DLIGRLAPDAARHYHNPVRSQAEIAHAVEAGIKSWSVDSRSELDKLFVRVPAENCEISPR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 V + + L + + ++ + L FH + + + + Sbjct: 147 FKLPVLGAAYDFGSKFGASPELAAELLRAV-ADRGYIPSLTFHPGTQCTDPHAWESYITT 205 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYS----VQIYLEPG 234 + + +++GGG + + Q ++ +++ Q+ EPG Sbjct: 206 AAEICAMAGVKARRLNVGGGFPSHRVTGVEPDLTAIFQLIRRVTDEAFGTDAPQLVCEPG 265 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG------PY 288 + + L T V + + + + + + G P Sbjct: 266 RGLCADAFALITRVKAVRDGQNVFLNDGVYGGLFELPIVGNLDRLQVLTPEGTPREDEPM 325 Query: 289 TAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 ++ G +C + D GE ++ GD + F Y+ FNG + N Sbjct: 326 PRIIFGPTCDSVDRLPGELTLPANIQEGDYVIFHGAGAYSTVTNTRFNGFGLMAHLTVN 384 >gi|52352395|gb|AAU43684.1| lysine/ornithine decarboxylase [uncultured archaeon GZfos26D8] Length = 425 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 127/347 (36%), Gaps = 21/347 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+++ K++ K+ +K + ++ +Y Sbjct: 81 KTPFFIFRKEEFRKLFKHFSQF-----GKVFYPVKANDHIEVLKAVDALSGCFEVDGIYH 135 Query: 63 VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E +++ + A+ + I +T + K + + + I Sbjct: 136 IERLLSIGVSPEKLQFSIPIKKPNGVKKALKYGVNRFIIDTEEEYLKIRQNRKNIQFIIR 195 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + I + K + + + + IE++ + G+ F+ + E ++ FS +L Sbjct: 196 VSI-ADILNIKEVCYHKWGIPIKKAIELANIIENDGSHFLGISFYLSQEIFNYENFSTVL 254 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 I K F + + +GGG+ D + + + I +EPG ++ Sbjct: 255 DCIAKNFK--GRSLSVLDIGGGL---DDSFSSNFHNKIKEIKESLNIDTIIVEPGRNLLD 309 Query: 240 NTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATI------YPNTGPYTAMV 292 + +V+ ++ +D+ + + + DY++ + I P++ Y ++ Sbjct: 310 PCIDMVVSVIGTAKRGDNMWAYIDAGIYSGLLDYVIKDKVFEISILDRTEPSSKTYKYLL 369 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 G + A D GE+ F+K + GD++ ++ Y F G N Sbjct: 370 SGPTSDALDFLGEYSFKKQLNAGDKLIIKNCGAYTFVLGTHFGGFNH 416 >gi|325970205|ref|YP_004246396.1| diaminopimelate decarboxylase [Spirochaeta sp. Buddy] gi|324025443|gb|ADY12202.1| Diaminopimelate decarboxylase [Spirochaeta sp. Buddy] Length = 400 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 46/382 (12%), Positives = 110/382 (28%), Gaps = 27/382 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +YL+D + N + + K + +N S E+ Sbjct: 17 FYLVDSARFRENFRELRDAFSLIYPKFNIAYSYKTNYTPKLCKIVNDLGGYAEVVSDMEM 76 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + E +N K+ + +++ ++ K A K +K Sbjct: 77 EIALRVGVKPEKIIWNGPIKNYSKVEGFLLAGGKVNLDSLYEVPLIKTIADKHPEKKIQI 136 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + ++I+N++ + + + + Sbjct: 137 GIRVNFEINDGVISRFGFDVDSDDFKEALALTKIQNIHLYGMQCHFATRKLETWKPRAEG 196 Query: 182 IEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFSEKYS----V 227 + + E + LGGG+ ++ + + Sbjct: 197 MIRLLDSLNIIPEIVDLGGGLFGKMADSLKSQFDSDIPTYNEYAAEIAPLFAERYGNDGP 256 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA-----TIY 282 + LEPG A+V + TTV +I + ++ L + Sbjct: 257 MLILEPGSALVGDCMQFATTVENIKNIRGKAIATVLGSIYNINPTLNKKNPPLEVVSCGI 316 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 G +C+ D + + +GD + F + Y+I K F N P Sbjct: 317 VQEFFQDLDFGGFTCIESDYIYRHYQ-GNIAVGDMVIFGNAGSYSIVLKPPFILPNFP-- 373 Query: 343 AVKNVDGTIKAIRE-FSYNDYY 363 + + ++ ++ +++D + Sbjct: 374 VLDISEAEVEILKRGEAFDDLF 395 >gi|289629083|ref|ZP_06462037.1| ornithine decarboxylase, putative [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649702|ref|ZP_06481045.1| ornithine decarboxylase, putative [Pseudomonas syringae pv. aesculi str. 2250] gi|330867051|gb|EGH01760.1| ornithine decarboxylase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 371 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 106/352 (30%), Gaps = 26/352 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64 +Y +D + + N +L A+K + + L+Q +SL EV Sbjct: 16 FYTVDPRWITRNAQQFSGCFPGT---VLYAMKANPLEQVLEALSQGGINHFDVASLAEVQ 72 Query: 65 LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 H K + + ++ +L+K +D + I L Sbjct: 73 TVHNTLPNAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTISLF 132 Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S S + L + ++ S GL FH + + A L Sbjct: 133 VRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTDWSLGLSFHVGSQALEDGPWLAAL 192 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233 + + + + +GGG + C ++ + + E Sbjct: 193 NDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCDHIQTSPTLKDLNLICEA 252 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG------- 286 G +V +L VL E + + + + + G Sbjct: 253 GRGLVYGGMSLFARVLSRREQSVFC---GAGIFGGLLSAQQWLQFPARVWRDGNPYTGAA 309 Query: 287 PYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 T + G +C + D + ++ D + F+ Y+++ + FNG Sbjct: 310 ENTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTGAYSVSLRTPFNGF 361 >gi|328955046|ref|YP_004372379.1| Orn/DAP/Arg decarboxylase 2 [Coriobacterium glomerans PW2] gi|328455370|gb|AEB06564.1| Orn/DAP/Arg decarboxylase 2 [Coriobacterium glomerans PW2] Length = 404 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 61/381 (16%), Positives = 111/381 (29%), Gaps = 38/381 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D+ L +D + V L A+K + L ++ S E Sbjct: 14 GTPLYIFDEAVLAARVDALRRALPDV-VDLCYAVKANTF--IVPGLAGSVERFEVCSPGE 70 Query: 63 VMLGHE-KFGGETHAYNVAYKD----CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 + + + YKD A + + + SQL D A + Sbjct: 71 LAICEAVGAPASDMVISGVYKDAATVEHALAGPAMPAALTVESSSQLELIADAAAAAGVR 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + S + E E + G+ F + + S Sbjct: 131 APVLLRL------TSGNQFGLDRSEILRAVDRFAEDERVELLGIQFFSGTQKTSLRRIGR 184 Query: 178 MLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230 L + + + G G+ + + D L E + + Sbjct: 185 ELDRLDRLVAELVDEHGWAPGELEYGPGLPVSYFEADRFDETALLAELGDMLRGMAFGGR 244 Query: 231 --LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284 LE G +I + T T+V+D N + + A P Sbjct: 245 ITLEIGRSIAASCGTYLTSVVDTKVNASQRYAIVDGGMHQL--VYYGHSMAMRQPPVRLL 302 Query: 285 --------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFN 335 +CG C DI + + + +G ++FE Y + + F Sbjct: 303 GAAGSSGAEQAQPWNICGALCTINDILAKQLPVEGLDVGRVLAFETAGAYCVTEGMSLFL 362 Query: 336 GINMPTIAVKNVDGTIKAIRE 356 ++P + + VDG + RE Sbjct: 363 SRDLPAVVLLGVDGAPRLARE 383 >gi|330813289|ref|YP_004357528.1| ornithine decarboxylase / Arginine decarboxylase [Candidatus Pelagibacter sp. IMCC9063] gi|327486384|gb|AEA80789.1| ornithine decarboxylase / Arginine decarboxylase [Candidatus Pelagibacter sp. IMCC9063] Length = 394 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 112/352 (31%), Gaps = 27/352 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSLYEV 63 P Y I + + + +L A+K + L + ++++ E+ Sbjct: 19 PVYCIREDSIETSAAWFKNNFPGN---ILYAVKANPNEKVLKTLLKNNITDFDTATIEEI 75 Query: 64 MLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-KIG 119 L + + + + N ++ +L+K + + Sbjct: 76 RLIKKIAPQAKTYFMHTIKSKESISEAYFKYNVKDFSLDSKDELDKILKATNQAKDLTLY 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRI S +++ L+ +I+ + G+ FH + + +S L Sbjct: 136 LRIQASNEHAEIDLSKKFGATVYESSSLLRQIKEVANKI-GISFHVGSQCMHPISYSKAL 194 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-------KYSVQIYLE 232 K++ + I++GGG T D + + E + K + E Sbjct: 195 KDVSSLIKKTGIEPNIINVGGGFPTTYPDMYPQPLINYINEIKKSFAKLNLKSKPALLCE 254 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI-------YPNT 285 PG A+V + +TV+ + K + ++ + D Q Sbjct: 255 PGRALVAESG---STVVRVELRKKQNLYINDGTYGSLFDAGTPQFIFPTKPIQLKKTFTK 311 Query: 286 GPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 G +C D G F +K GD I + Y ++ + FNG Sbjct: 312 RLVPYSFYGPTCDGIDFMKGPFMLPSNIKQGDYIEIGQLGAYGLSLRTKFNG 363 >gi|253741439|gb|EES98309.1| Ornithine decarboxylase [Giardia intestinalis ATCC 50581] Length = 448 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 55/406 (13%), Positives = 104/406 (25%), Gaps = 71/406 (17%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 +++ ++ V++ A+KC + ++ G +S EV Sbjct: 41 VLNVSEIERYYKLWKTHLPE--VQVRYAIKCNMHPLLLRSMYLLGAGFDCASPAEVRAAL 98 Query: 68 E-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126 Y K + + F S+ K G + + Sbjct: 99 ATGCPPSKIIYANPQKPKQSIVEAFRLNCNTFTFDSEHELLSMLENTPPGKAGRFVLRLL 158 Query: 127 SYSKFILADPNR-PFSRLGEKCKDKIESEIK---NVNGLMFHNNCENKSFLCFS---AML 179 + F +C I N+ G FH S F + Sbjct: 159 PPDESSSICRFGVKFGASPSECYRLIRLCKHLGANLVGFSFHVGSGCGSADSFRLAVRYM 218 Query: 180 KNIEKEFGHFITQIEWISLGGGI--------------HFTDKDYPVKDFCQRLKEFSEKY 225 K + +++GGG H ++ L+E +K Sbjct: 219 GEAAKFAREQGFTLTVMNIGGGYMSRGAERHYDEPNQHANISPPSFEEVASALREEIDKI 278 Query: 226 SV---------QIYLEPGEAIVTNTTTLNTTVLDISE----------------------- 253 V +I EPG + TL T + Sbjct: 279 KVYFTSKSEDLEIMAEPGRFFAGDIMTLGTRIYGRRIIFDKIEDDNYLTEKEIIESGKAS 338 Query: 254 ------------NIKNLVIVDSSVEAHVPDYLLY---QESATIYPNTGPYTAMVCGRSCL 298 I+ V H+ Y +E + + T+ + G +C Sbjct: 339 INEVKYYVGDGVYGYYNAILFDHVVPHLRFTDKYGDSKEHSGTCMGSSLNTSSIFGPTCD 398 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + D + +++GD + + Y FNGI ++ Sbjct: 399 SLDCILKERKLPLLEVGDWVITDAFGAYTYAAATEFNGIPHVSVVC 444 >gi|330891534|gb|EGH24195.1| ornithine decarboxylase [Pseudomonas syringae pv. mori str. 301020] Length = 371 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 108/351 (30%), Gaps = 24/351 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64 +Y +D + + N +L A+K + + L+Q +SL EV Sbjct: 16 FYTVDPRWITRNAQQFSGCFPGT---VLYAMKANPLEQVLEALSQGGINHFDVASLAEVQ 72 Query: 65 LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 H K + + ++ +L+K +D + I L Sbjct: 73 TVHNTLPDAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTISLF 132 Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S S + L + ++ S GL FH + + A L Sbjct: 133 VRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTDWSLGLSFHVGSQALEDGPWLAAL 192 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233 + + + + +GGG + C ++ + + E Sbjct: 193 NDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCDHIQTSPTLKDLNLICEA 252 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT---- 289 G +V +L VL E + Q A ++ + PYT Sbjct: 253 GRGLVYGGMSLFARVLSRREQSVFCG--AGIFGGLLSAQQWLQFPARVWRDGTPYTGAAE 310 Query: 290 --AMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C + D + ++ D + F+ Y+++ + FNG Sbjct: 311 NTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTGAYSVSLRTPFNGF 361 >gi|157108351|ref|XP_001650188.1| ornithine decarboxylase [Aedes aegypti] gi|108868550|gb|EAT32775.1| ornithine decarboxylase [Aedes aegypti] Length = 415 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 93/356 (26%), Gaps = 26/356 (7%) Query: 23 YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAY 81 V+ A+K + +T G +S E+ + E + Sbjct: 43 DTLHLPRVRPFYAIKSNDEPSIVETTILLGCGYDCASTGELKRILGFRVEPERIMFGQPM 102 Query: 82 KDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF 140 K E + +F++ +L K + I R+ + + Sbjct: 103 KTIESLELAKKMKLRTVFDSEDELRKIHQHYPEADVVIRFRLETAEDPMNLGIKFGCEAD 162 Query: 141 SRLGEKCKDKIESEIKNVNGLMFHNN---CENKSFLCFSAMLKNIEKEFGHFITQIEWIS 197 E D + NV G F+ K+F K + + I Sbjct: 163 VEARELL-DLAKELGINVIGWCFNLGHACINPKNFYIGIKKGKELTDYAESLGFKFNLID 221 Query: 198 LGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT-----LNTTV 248 LGGG + Y + + F + I EPG T Sbjct: 222 LGGGFSGDKDVSIEQYAEQINKGLDEFFPAELGYTIVAEPGRYYSAAAVTAVVPIHGKRF 281 Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTA------MVCGRSCL 298 + +N ++ V + + P + G +C Sbjct: 282 IRSKDNPNDIEKVFYYFNDGIYGTFYSAKYRGKAVKPIVWKQPSECGPTRKTTLYGPTCD 341 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP-TIAVKNVDGTIKA 353 D F + + + D + FE+ Y+ FNG + P + Sbjct: 342 GIDFFAKDIEIPELNVADFVVFENQGAYSRVHACRFNGFSPPKPVIFVRQSVWALL 397 >gi|126322169|ref|XP_001369332.1| PREDICTED: similar to Antizyme inhibitor 1 [Monodelphis domestica] Length = 449 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 114/371 (30%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC +A + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E K + I + +++ K + K+ L I Sbjct: 98 VQELGVSPENIIDISPCKQSSQIKYAAKTGVNIMSCDNEIELKKIARNHPNAKLLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + G+ FH + K + L + Sbjct: 158 EDISGDEESNMKFGTTLKNCRHLLECAKELDVQIVGVKFHVSSSCKEPQVYIHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEKYSVQIYLEPGEAIV 238 F G F ++ + +GGG ++ + F E +++ EPG V Sbjct: 218 VFDMAGEFGFKMTILDIGGGFTGSEFQLQEVNHVISPLLDVYFPEGSGIKVISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---------------------QE 277 ++ TL ++ ++V +Y E Sbjct: 278 SSAFTLAVNIIAKKVVENDVVSSGVGKTGSNEPAFMYYMNDGVYGSFASKLSENLNTIPE 337 Query: 278 SATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 Y P +T+ + G SC D E + +GD + F+++ ++ + FN Sbjct: 338 VHKKYKKDAPLFTSSLWGPSCDELDQIVENCLLPELNVGDWLIFDNMGADTLHEPSAFND 397 Query: 337 INMPTIAVKNV 347 PTI Sbjct: 398 FQRPTIYYMMS 408 >gi|291522187|emb|CBK80480.1| Diaminopimelate decarboxylase [Coprococcus catus GD/7] Length = 395 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 61/375 (16%), Positives = 115/375 (30%), Gaps = 31/375 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP ++ D L + V L A+K + L ++ S E Sbjct: 15 QTPMHIFDMAILKKRVAFLKSHLPE-KVSLCYAVKANTF--IIKELCGQVERFEVCSPGE 71 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS----NCDTIIFNTVSQLNKFKDKAQKLHKK 117 + + + + YK + L + ++ Q A++ K Sbjct: 72 LAICRRLQIPMRQVVLSGVYKTPAVMEALFRDGVDIGIFTAESMEQYLLLAGLAERYTMK 131 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 I L + + L + + +E V G+ F + + S Sbjct: 132 IRLLLRL------TSGNQFGMDENVLIQTIRMSRSNEWVEVEGIQFFSGTQKTSVKKLRR 185 Query: 178 MLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229 L ++ +++ + G G+ D L EFSE S Sbjct: 186 ELTYVDAFIQRLETEEGFRVKELEFGPGLPVFYFQGDDFDEVSFLAEFSEMLSEMTSQVK 245 Query: 230 -YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-----PDYLLYQESATIYP 283 E G +I + T+V+D N K + + + + + Sbjct: 246 LTFELGRSIAASCGNYMTSVVDAKVNKKQNYAIVDGGIHQLVYYGQSMAMKHPYCHVLPE 305 Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMP 340 T + G C DI + + + +GD I FE+ Y+ F ++P Sbjct: 306 KQEGETMDWNLFGSLCTVNDILVKQMPVRNLTVGDVIVFENTGAYSTTEGIALFLSRDLP 365 Query: 341 TIAVKNVDGTIKAIR 355 I ++ DG I +R Sbjct: 366 KILLRKEDGEIHVLR 380 >gi|155370410|ref|YP_001425944.1| hypothetical protein FR483_N312L [Paramecium bursaria Chlorella virus FR483] gi|155123730|gb|ABT15597.1| hypothetical protein FR483_N312L [Paramecium bursaria Chlorella virus FR483] Length = 372 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 115/351 (32%), Gaps = 24/351 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D + + + I V+ A+KC + L +S E+ Sbjct: 19 FYVSDPKFVEHLTSVWSDIFPL--VQPFYAVKCNNDKVLLKVLADNGVNFDCASKNEITQ 76 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + K + A + + + F++ +L+K K+ + + +R Sbjct: 77 VLKLGVDPSRIIFAHTVKSPDSIIFAKQAGVNLMTFDSSFELDKIKNYHPEAKMVLRIRC 136 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + K E + + V G+ FH +++ + LK+ Sbjct: 137 DDPHALVKLEKYGALSNEI---ETLLEHAKKLHITVYGISFHVGSGSRNPDAYWKALKSA 193 Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEP 233 + + ++ I +GGG++ +D C +K+F V+ EP Sbjct: 194 REAYDIATAMGHEVGIIDIGGGMYADIEDNGTVSTCVAEYVRDGIKDFFSDTDVKFIAEP 253 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT-------IYPNTG 286 G + + L V+ + ++Y+++ + N Sbjct: 254 GRFFAQHYSVLACQVVGKRVRDGYYEYFVNESTYGGFSNVIYEKAVPEPIIVKDVGENDE 313 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + +++ G +C D+ + + I D I F Y FNG Sbjct: 314 KHMSVIYGCTCDGVDVINKQTHIPELNIDDWIYFPMWGAYTNCLVTSFNGF 364 >gi|301630922|ref|XP_002944564.1| PREDICTED: diaminopimelate decarboxylase-like, partial [Xenopus (Silurana) tropicalis] Length = 214 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 61/192 (31%), Gaps = 11/192 (5%) Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS------VQIYLEPGEAI 237 I I GGG+ ++ ++ + +EPG ++ Sbjct: 19 HGIEAAGIAIHHIDFGGGLGIAYNGETPPAADALWRQLLDRLDARGYGDRALMIEPGRSL 78 Query: 238 VTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGP---YTAMVC 293 V N T VL + + + D+++ + + + P T V Sbjct: 79 VGNAGVCLTEVLYLKPGEQKNFCIVDAAMNDLPRPAMYEAFHGIVPLHARPGASTTYDVV 138 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 G C +GD G V+ GD ++ Y + + +N + + + Sbjct: 139 GPVCESGDWLGHERALA-VQSGDLLAVLSAGAYCASMASSYNTRGRAAEILVDGSQAVLI 197 Query: 354 IREFSYNDYYNN 365 R S D ++N Sbjct: 198 RRRESVTDIFSN 209 >gi|218134538|ref|ZP_03463342.1| hypothetical protein BACPEC_02441 [Bacteroides pectinophilus ATCC 43243] gi|217989923|gb|EEC55934.1| hypothetical protein BACPEC_02441 [Bacteroides pectinophilus ATCC 43243] Length = 376 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 65/372 (17%), Positives = 129/372 (34%), Gaps = 34/372 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTL-NQYMDGTTSSS 59 TP Y I N + + A V+ ++K G+ + + S Sbjct: 3 TPCYTIHLDIFEKNCREVMDAFEEAWGGRVEYGYSVKTNHDAGLMKYAHAKLGWFIETVS 62 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116 E+ L F E +N K DA+++ + + L+ + + Sbjct: 63 PDELELAFNLGFDAENIIFNGPCKCSRQDALINAIRGGAYVNLDNLDDVSFVCRHVSDVR 122 Query: 117 ---KIGLRINPSVSYSKFILADPNRPFSRLGEKCK--------DKIESEIKNVNGLMFHN 165 +IG+R+N ++ SR G + D + S GL H Sbjct: 123 DASRIGIRVNYNLEAECPGETTAGESVSRFGIDVENKDFARAVDMLRSAGIEPAGLHMHT 182 Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR-------L 218 + ++S F+++ + + + ++ ++ +GGG K Q L Sbjct: 183 STRSRSAAVFTSLARKAAQLVNDYGLKLHFVDMGGGYFGGQKVEGKPSMEQYAQVITREL 242 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 K+ + LEPG +++ + T T+VL + + ++ HV ++ ++ Sbjct: 243 KKALNPEMTTLILEPGASVIATSVTYETSVLSVRDIRGTKIVTMDGTLLHVNPFMAHRNQ 302 Query: 279 ATIYPNTGPYTAM-------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 Y A +CG +C+ D F + H + ++ GD +SF Y + Sbjct: 303 PYSTSLIADYDARPVDEHQIICGCTCMENDRFADEHSVRRLEPGDVLSFRFAGAYTMAFN 362 Query: 332 NWFNGINMPTIA 343 + F P Sbjct: 363 SNFIVN--PAEV 372 >gi|312882026|ref|ZP_07741780.1| lysine/ornithine decarboxylase [Vibrio caribbenthicus ATCC BAA-2122] gi|309370321|gb|EFP97819.1| lysine/ornithine decarboxylase [Vibrio caribbenthicus ATCC BAA-2122] Length = 402 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 114/366 (31%), Gaps = 34/366 (9%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66 ++D + + ++ A+K + L Q G ++S E++ Sbjct: 19 ILDIEGIRRQYTFLQDSL--PNTQIRFAIKACPNDEVLAALAQKGAGFDAASPNEIIAAI 76 Query: 67 HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126 + Y K E ++ F T S+ + + + I RI Sbjct: 77 KSGANLKNIHYGNTIKSNEQISLAFKLGIKDFVTDSKEDLYAVSEYAPNSNIFCRIATDG 136 Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML---KNIE 183 + + + L+ + ++ G+ H + ++ + + Sbjct: 137 NGAVWSLSKKFGCSINATVEILKLAKNIGLEPVGVSLHIGSQQLQVDAWNKVFSSLAELL 196 Query: 184 KEFGHFITQIEWISLGGGI--------HFTDKDYPVKDFCQRLKEFSEK------YSVQI 229 K ++I+LGGG+ H +K + +K+ +Q Sbjct: 197 KRLAKDNIYPKYINLGGGLPASGYLDKHGKVMHADIKKTLKTIKDGINHLGSLSLRPLQF 256 Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVP--DYLLYQESATI 281 +EPG +V + + V+ ++ ++ + + + D L + Sbjct: 257 IIEPGRFMVADFGVIRAHVVRLTTREQLNGEKQHWLYLSVGRYNGLYELDALRFPILFPT 316 Query: 282 YPNTGPYTAMVCGRSCLAGDIF----GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNG 336 + A V G +C + DI +K GD + Y + + FNG Sbjct: 317 VKSNQYVKAFVAGPTCDSDDILTSENAPISVPANLKAGDPVLILSTGAYTTSCSSVGFNG 376 Query: 337 I-NMPT 341 +P+ Sbjct: 377 FLPLPS 382 >gi|289667147|ref|ZP_06488222.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 429 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 100/354 (28%), Gaps = 29/354 (8%) Query: 21 ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79 + + +L A K A + TL ++DG ++S E+ H + + Sbjct: 41 WMRAQLPPQCELFYAAKANAEPPVLRTLAAHVDGFEAASGGELAWLHAQQPQAALLFGGP 100 Query: 80 AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPS---VSYSKFILAD 135 D E+ + D + ++S+L + A + + + + + L Sbjct: 101 GKLDTELVQAAALPDCTVHVESLSELERLAAIAAHAGRCVSVFLRMNIAVPGAQSTRLMM 160 Query: 136 PNRP-----FSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF 189 P + +++ + G FH + ++ + + Sbjct: 161 GGHPSPFGLDPCDLDTAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLHLIAAYLRTVQQW 220 Query: 190 ITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIY--LEPGEAIVT 239 ++ GGG + FC L ++ ++ LEPG + Sbjct: 221 RHTYALGPLRVNAGGGFGVDYLAPELSFDWAGFCAGLPALLHEHGTDLHLRLEPGRYVSA 280 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY-------TAMV 292 + VLD+ + V H G + Sbjct: 281 SCGWYLMEVLDLKRSHGAWFAVARGGTHHFRTPAAQAHDHPFRVLRGARAPVLRDTPVTL 340 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345 G+ C D+ + GD ++F Y N + F P + Sbjct: 341 VGQLCTPKDVLARDQHVAVLAPGDCLAFPLAGAYAWNISHQHFLMHPAPQMVFL 394 >gi|84622901|ref|YP_450273.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366841|dbj|BAE67999.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 398 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 100/354 (28%), Gaps = 29/354 (8%) Query: 21 ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79 + + A +L A K A + TL ++DG ++S E+ H + + Sbjct: 41 WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWLHAQQPQAPLLFGGP 100 Query: 80 AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138 + E+ + D + ++S+L + A + + + + +++ Sbjct: 101 GKLNTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLTM 160 Query: 139 PFS--RLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF 189 G D + + G FH + ++ + + Sbjct: 161 GGHPSPFGLDPDDLDAAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLHLIAAYLRTVQLW 220 Query: 190 ITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVT 239 ++ GGG + FC L ++ ++ LEPG + Sbjct: 221 RHTYALGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVSA 280 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT-------AMV 292 + VLD+ + + H G T + Sbjct: 281 SCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRVLRGARTPVLRDTPVTL 340 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345 G+ C D+ + GD ++F Y + F P + Sbjct: 341 VGQLCTPKDVLARDQSVAALAPGDCLAFPLAGAYAWTISHQHFLMHPAPQMVFL 394 >gi|126330252|ref|XP_001366814.1| PREDICTED: hypothetical protein isoform 2 [Monodelphis domestica] Length = 459 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 113/354 (31%), Gaps = 34/354 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ +KC ++ G+ L + G + ++ E+ L Sbjct: 41 FFVADLGDVVK--KHLRFLKNLPRVRPFYVVKCNSSPGVLRALAELGLGFSCANKAEMEL 98 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K + + + +++ K ++ LRI Sbjct: 99 LRHIGVPAHKIIYTSPCKQAAQVKQAARLGIRMLSFDNEVELAKVARSHPTARMVLRIAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN----KSFLCFSAMLK 180 S S L+ + + + V G+ FH ++F A + Sbjct: 159 DDSCSPARLSMKLGATLKSCRHLLETAKKMNMEVVGVSFHVGSGCSSDPQAFTQSIADAR 218 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + + ++ + LGGG T+ ++ F E V I EPG Sbjct: 219 LVFEMGTELGYRMHILDLGGGFPGTEDSKVRFEEMASVINSALDMYFPEGCGVDILAEPG 278 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-------HVPD--------YLLYQESA 279 V + TL ++ E + +D A H+ + Sbjct: 279 RYYVASAFTLAVRIVAKKEVPSDQTGLDEEDGASPKSIVYHISEGVYGAFNCVFFDNACP 338 Query: 280 TIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 P Y++ + G +C D E +++GD + FE++ Y Sbjct: 339 MPILQKKPSPDQRVYSSSLWGPTCDDLDHVAEGLCLPELQLGDWLIFENMGAYT 392 >gi|57095270|ref|XP_532293.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 1 [Canis familiaris] gi|73974224|ref|XP_849306.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 2 [Canis familiaris] gi|73974226|ref|XP_858461.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 4 [Canis familiaris] Length = 447 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 56/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ I +K +KC + + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + +++ K + K+ L I Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKIGVNTMTCDNEVELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G F + + +GGG + V L F E ++I EPG V Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGIYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ +++ + FN Sbjct: 338 VHKKYKKDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYYMMS 408 >gi|164663157|ref|XP_001732700.1| hypothetical protein MGL_0475 [Malassezia globosa CBS 7966] gi|159106603|gb|EDP45486.1| hypothetical protein MGL_0475 [Malassezia globosa CBS 7966] Length = 493 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 50/399 (12%), Positives = 109/399 (27%), Gaps = 68/399 (17%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D + + + A+KC + L G +S E+ Sbjct: 66 FYVADLATIYRQYVRWRR--ELPRIIPFYAVKCNPEPIVLHLLAALGLGFDCASNGEIQT 123 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K + + + + +K K K+ +RI Sbjct: 124 ILDMGVSPSRIIYANPCKASSFVRRAAAQNICLTTFDNVDELYKMKRFHPESKLVVRILT 183 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L + K +V G+ FH + L + Sbjct: 184 DDSKSVCQLGIKFGAPLADVPRLLSKARELDLDVVGVSFHVGSGCFDPEAYRDALYRSRQ 243 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-------------- 227 F + + + +GGG + + + + ++ + Y Sbjct: 244 AFDMGREYGYTFDLLDIGGGF----EHHNFEAIAKVVRSALDDYFPDEAFAPGGSRMTER 299 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDISENIKNL-----VIVDSSVEAHVPDYLLYQE- 277 ++ EPG V +L T ++ ++ ++ + P + YQ Sbjct: 300 PKGLRVIAEPGRYFVYRAFSLATNIIARRQSEEDNSDAVRQDGQGGADDGRPKAMYYQND 359 Query: 278 ----------------SATIYPNTGPY-----------------TAMVCGRSCLAGDIFG 304 + + V G +C + D Sbjct: 360 GTYGAFNCILFDHQQVHPKVLSMQRDFVYERESSVPELAQDQWRPCSVWGPTCDSMDCIM 419 Query: 305 EF-HFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + + +GD + +E++ Y + + FNG+ + Sbjct: 420 RQTRLPRALDVGDWLVYENMGAYTLCASSTFNGLARAQV 458 >gi|227500436|ref|ZP_03930498.1| diaminopimelate decarboxylase [Anaerococcus tetradius ATCC 35098] gi|227217499|gb|EEI82818.1| diaminopimelate decarboxylase [Anaerococcus tetradius ATCC 35098] Length = 392 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 68/380 (17%), Positives = 137/380 (36%), Gaps = 20/380 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TPY++I + KL N++ + +L ++K + + + + S Sbjct: 10 TPYFIIYQDKLDKNIEDYKTALINEWPNSQLSFSVKTNSLPWLLEYIRDKGIFAEVVSKE 69 Query: 62 EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E +L E L+ T+ ++ +LN ++ IG Sbjct: 70 EYLLAKRCGYKDNEIIFNGPIKNKDIFLDSLTMGATVNIDSKEELNFLFGLNEQSRNNIG 129 Query: 120 LRINPSVSYSKFILADPNRPFSRLGE-----KCKDKIESEI--KNVNGLMFHNNCENKSF 172 +RINP+ + R G + I + GL H N +S Sbjct: 130 IRINPNPDIFEEKDIAYKNDGFRFGFSEETGELNRAISIVRGASDSVGLHIHCNSITRSK 189 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEFSEKYSV 227 + A+ +K + ++ +I +GGG + L + + Sbjct: 190 EVYIALANYAKKIIKKYDLKVSYIDIGGGFFGGIPGKTTAREYISVIKNVLSKVVDINVT 249 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 ++ +EPG AI+ + L T V+D+ E ++ ++ H+ + N Sbjct: 250 KLIIEPGSAIIGSCVDLVTKVIDVKETCRSRIVTTDGSRIHIDPLWAKKSYVYTLENKSD 309 Query: 288 Y---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 ++CG +C+ D + +K ++ GD+I + V Y++ F P + + Sbjct: 310 SNITKQIICGYTCMDHDRLMTIYNDKKLECGDKIIYHRVGAYSVTFGGMFISY-YPDVYI 368 Query: 345 KNVDGTIKAIREFSYNDYYN 364 K + K + S +D+YN Sbjct: 369 KKSENIEKVRGKISVDDFYN 388 >gi|302544845|ref|ZP_07297187.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces hygroscopicus ATCC 53653] gi|302462463|gb|EFL25556.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces himastatinicus ATCC 53653] Length = 434 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 54/382 (14%), Positives = 109/382 (28%), Gaps = 41/382 (10%) Query: 24 IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY-NVAY 81 + V A+K + + L G +S E+ L + + A Sbjct: 40 VAPGTPVLHAFAVKAASLVPVLRLLTDEGLGCEVASPGELALARAAGTDTDRIVLDSPAK 99 Query: 82 KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRINPSVSYSKFILADPNRP 139 E+ L + + +L + +GLR+NP V Sbjct: 100 TPAELREALDLGIALNADNPQELARLDALVAGTPTRSPLGLRVNPQVGGGSIGALSTATE 159 Query: 140 FSRLGEKCKDK--------IESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI- 190 S+ G +D +E + L H + +A ++ + Sbjct: 160 TSKFGVALRDVGARDWVVRAFAERPWLTRLHAHVGSQGCPLDLMAAGVQAAYELAEEINE 219 Query: 191 ----TQIEWISLGGGIHFT----DKDYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVT 239 QI+ + +GGG+ + +++ Q LK + E G +++ Sbjct: 220 TIGRRQIDTLDIGGGLPVNFTSDEVTPSYREYTQLLKTTVPGLLDGRYGLVTEFGRSLLA 279 Query: 240 NTTTLNTTVLD------ISENIKNLVIVDSSVEAHVPDYLLYQE-------SATIYPNTG 286 + + V + + ++ P + G Sbjct: 280 KSGVVLARVEYAKSAGGRPIAVTHAGAQLATRTVFAPTAWPLRIAPYDADGRPKPTGPAG 339 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 P T + G C AGD+ E + GD + D Y + +N + P + Sbjct: 340 PVTQDIAGPCCFAGDLVAENRALPELTAGDLVGLLDTGAYYFSNHFAYNSLPRPGVYGFA 399 Query: 347 VDGT----IKAIREFSYNDYYN 364 DG + + + + Sbjct: 400 PDGDGIRFAEVRKPQTVAEIVA 421 >gi|194207728|ref|XP_001499776.2| PREDICTED: similar to arginine decarboxylase [Equus caballus] Length = 505 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 111/358 (31%), Gaps = 33/358 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L + G + ++ E+ L Sbjct: 41 FFVADLGAVVR--KHFCFLKCLPRVRPFYAVKCNSSLGVLKVLAELGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K + + + +++ K ++ L I Sbjct: 99 VQRIGVPASKIIYANPCKQIAHIKYAAKHGVRLLSFDNEIELAKVVKSHPSARMVLCIAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH + ++ + + Sbjct: 159 DDSHSLSRLSFKFGASLKSCRHLLENAKKSHVEVVGVSFHIGSDCPDPQAYAQSIADARL 218 Query: 185 EF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 F ++ + LGGG + ++ F E V I + G Sbjct: 219 VFEIGAELGHRMHILDLGGGFPGVEGTKVRFEEITSVINSALDLYFPEDCGVDILAKLGR 278 Query: 236 AIVTNTTTLNTTVLDISE---------------NIKNLVIVDSSVEAHVPDYLLYQESAT 280 VT+ TL +++ E + + V L T Sbjct: 279 YYVTSAFTLAISIIAKKEVLLDQPSREEENSSAPKTIVYHLHEGVYGIFNSVLFDNTCPT 338 Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 P Y++ + G + D E + + +GD + FE + Y + + Sbjct: 339 PILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFEHMGAYTVGMGS 396 >gi|304321189|ref|YP_003854832.1| diaminopimelate/ornithine decarboxylase [Parvularcula bermudensis HTCC2503] gi|303300091|gb|ADM09690.1| diaminopimelate/ornithine decarboxylase [Parvularcula bermudensis HTCC2503] Length = 392 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 90/335 (26%), Gaps = 18/335 (5%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEVMLGHEKFGGETHAY 77 A + + A+K + + L D +SL E+ +F T A+ Sbjct: 30 RAARWFAAQFRGTVFYAVKANPDPIVLEALASGGVDRFDVASLAEIRAVRRQFPSSTLAF 89 Query: 78 NVAYKDCEID---AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILA 134 K E + +L+K A K + L + V S L Sbjct: 90 MNPVKAPEAIAEAYFRHGVRIFALDRQEELDKIVT-ATKGAGDLTLIVRIGVDNSTADLK 148 Query: 135 DPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ 192 + +R G D I + + G+ FH +N++ F + ++ + Sbjct: 149 LGMKFGAR-GPAVADLIRTTRWHAEKLGVSFHIGSQNRAPEAFVQAMTSVAGQVQAAGVL 207 Query: 193 IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252 ++ + +GGG ++ + L + Sbjct: 208 LDILDVGGGFPAAYPGRDHAALSDYIEAIHRAFDRFPAFGRTALWAEPGRALVAEAASLI 267 Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY---------TAMVCGRSCLAGDIF 303 ++ D + + L G +C D Sbjct: 268 VRVEGRRDFDLYINDGIYGALYDAGHLNWRFPCRAVGHPADAMTAPFRFYGPTCDDADYM 327 Query: 304 -GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 G F + GD I + Y + FNG Sbjct: 328 EGPFFLPAGMAQGDTIEIGQLGAYGRTMTSGFNGY 362 >gi|155371707|ref|YP_001427241.1| hypothetical protein ATCV1_Z760R [Acanthocystis turfacea Chlorella virus 1] gi|155125027|gb|ABT16894.1| hypothetical protein ATCV1_Z760R [Acanthocystis turfacea Chlorella virus 1] Length = 371 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 107/349 (30%), Gaps = 20/349 (5%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D + +D + V A+KC + L + +S E+ Sbjct: 18 FYVCDPKFAERLVDEWYRML--PSVHPFYAVKCNDDPVLLKYLEKNGVNFDCASKGEIAK 75 Query: 66 GH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + K E N I S K K + LRI Sbjct: 76 VLNAGALPSRILFAHTIKSPEALLYAKNVGVNIATFDSTFELDKMKLYHPACEAVLRIRC 135 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + NV G+ FH +++ + LK+ + Sbjct: 136 D-DPHALVKLEKYGANADEITPLLEHAKKIGMNVKGISFHVGSGSRNPDAYWKALKSARE 194 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235 + I I +GGG++ +D C +K+F +V+ EPG Sbjct: 195 AYDIAVSLGHSISIIDIGGGMYADIEDDGAITTCVADYILDGIKDFFSGINVEFIAEPGR 254 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT-------IYPNTGPY 288 + + L ++ + ++Y+++ I + + Sbjct: 255 FFAQHYSVLACQIVGKRIRDGFYEYFVNESTYGAFSNVIYEKAVPEPIPVRDIDEDELKH 314 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 +++ G++C D+ + + I D I FE Y FN Sbjct: 315 ISVIYGQTCDGIDVINKQTHLPELHIDDWIYFERWGAYTRVLHTGFNSF 363 >gi|224368165|ref|YP_002602328.1| LysA2 [Desulfobacterium autotrophicum HRM2] gi|223690881|gb|ACN14164.1| LysA2 [Desulfobacterium autotrophicum HRM2] Length = 410 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 109/370 (29%), Gaps = 28/370 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P YL+++ L + A+K + + G SS Sbjct: 42 GSPLYLVEEAVLRERAGQFRAAFERQLPSTSFYYAMKSNNLSDVSRIVLGEGFGLDVSSG 101 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII--FNTVSQLNKFKDKAQKLHKKI 118 E+ + D E++ + N D + ++ + + ++ K++ Sbjct: 102 IELSTALGLGATDIIFSGPGKTDPELELAVENADRVTVLMDSPGECQRLMALVERRKKRL 161 Query: 119 GLRINPSVSYSKFILADPNRPFSRLG--EKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + + + + L E KD K V N ++ Sbjct: 162 RVGLRLNHHTVGLWRKFGVPMEALLPLYETIKDHSYMAFKGVQFHSSWNLVPDRQVELIR 221 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGI---------------HFTDKDYPVKDFCQRLKEF 221 + ++K F E+I +GGG H ++ F Q L + Sbjct: 222 ILGDTLKKMPPSFFDDCEFIDIGGGYWPSQGEWLVSDDPLGHQMIPASSIETFAQTLGQV 281 Query: 222 SEKYS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275 + +I EPG I + + V+D + ++ + + Sbjct: 282 IREKILSLGAFRICFEPGRWICNDAMHIIIQVIDKKAPDLVITDAGTNAVGWERFETDYF 341 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 T V G C D++G +F + ++ D + Y + + F Sbjct: 342 PVINLTRSGTMEKPCHVLGSLCTPHDVWGYAYFGQEIREKDILMIPTQGAYTFSLRQEFI 401 Query: 336 GINMPTIAVK 345 +P + V Sbjct: 402 -KPLPRVVVI 410 >gi|226943071|ref|YP_002798144.1| diaminopimelate decarboxylase [Azotobacter vinelandii DJ] gi|226717998|gb|ACO77169.1| diaminopimelate decarboxylase [Azotobacter vinelandii DJ] Length = 396 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 101/350 (28%), Gaps = 30/350 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D L AL AG +L A K + +L ++DG ++S E+ Sbjct: 26 AYVYDLPA-LARHARALRAALPAGCELFYAAKANPEAPILRSLAPWVDGFEAASGGELRW 84 Query: 66 GHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDK--AQKLHKKIGLR 121 HE + + K A +C ++ +L + A + LR Sbjct: 85 LHECHPDKPLIFGGPGKLDSELAAAMDCGISAFHVESIGELRRLAVVAKAHGRPAPLLLR 144 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK---- 170 +N + + + G + E + GL FH Sbjct: 145 LNLKLDEAPDSRLVMGGKPTPFGLDEEALDEALALLAGEPWLELQGLHFHLLSHQLDSAA 204 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYS 226 + + + ++ +++GGG+ +D + FC L + Sbjct: 205 HLQLMRSYFRCFRQLNARHGLDLKLLNVGGGMGIDYRDHARSFDWPGFCAGLAALIAEEG 264 Query: 227 V---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282 + +I E G + VLDI N V H + + Sbjct: 265 MAGTRIRFEIGRFLAAACGYYLMEVLDIKRNHGQYFAVARGGTHHFRTPAAQGHDHPFVV 324 Query: 283 PNT------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + G+ C D+ + +GD + F Y Sbjct: 325 LRGERPAELENQPVTLVGQLCTPKDVLARQQPVAALAVGDLLVFPLAGAY 374 >gi|167564952|ref|ZP_02357868.1| putative diaminopimelate decarboxylase [Burkholderia oklahomensis EO147] Length = 418 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 106/356 (29%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D ++ ++N++ ++ ++ A+K + L + + G + S Sbjct: 49 PLFLYDPRRAVDNVERLRGALGGLQDGDFRIHYAMKANRFRPLLSELRRSPIFGVDACSP 108 Query: 61 YEVMLGHE-KFGGETHAYNV--AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E +Y D + + +T+S + ++ Sbjct: 109 EELREALACGFAPERISYTAHGMMPDEAALLAVLPDVHVNCDTLSAIALLGSRSPGREIG 168 Query: 118 IGLRINPSVSYSKFILADPNRPF-SRLGEKCKD----KIESEIKNVNGLMFHNNCENKSF 172 I + + Y ++ G + + + H + Sbjct: 169 IRVNPGVGIGYGDSERLSYAGATVTKFGIYAEQFGAALELAARHGLTVTWLHCHAGCGYL 228 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGG-------IHFTDKDYPVKDFCQRLKEFSEKY 225 A + + F+ ++ + TD+ ++ + + + Sbjct: 229 DPQLASFERVLDALDTFVARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGRR 288 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + I +EPG+ I + L V + + + + + I Sbjct: 289 PLSIAIEPGDFIAKDGGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCI 348 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++G PV+ GD ++ + GY + + Sbjct: 349 RRPGAAQSVCVAGNINEALDLWGSDVSLPPVEPGDFVALLNAGGYASSMSSNHCLR 404 >gi|239994458|ref|ZP_04714982.1| putative diaminopimelate decarboxylase [Alteromonas macleodii ATCC 27126] Length = 245 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 66/220 (30%), Gaps = 15/220 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ L + G S E Sbjct: 26 GTPVYIYSRATLERHWHAFNDAIGEHPHLVCYAVKANSNIGVLSVLAKLGSGFDIVSAGE 85 Query: 63 -VMLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + ++ D A+ + +L++ A ++ Sbjct: 86 LARVIEAGGDASKVVFSGVGKKHDEIRYALQQGIMCFNVESEPELHRINQVAGEMGTKAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167 I LRINP V ++ G + + + NV G+ H Sbjct: 146 ISLRINPDVDAKTHPYISTGLKANKFGIARERALATYELAASLPHLNVVGMDCHIGSQLT 205 Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 E F+ L + E IE + +GGG+ T Sbjct: 206 EIGPFVDALERLLLLIDELAERNIIIEHLDVGGGLGVTYN 245 >gi|320528632|ref|ZP_08029785.1| pyridoxal-dependent decarboxylase, sheet domain protein [Solobacterium moorei F0204] gi|320130998|gb|EFW23575.1| pyridoxal-dependent decarboxylase, sheet domain protein [Solobacterium moorei F0204] Length = 392 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 59/380 (15%), Positives = 119/380 (31%), Gaps = 32/380 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP ++ D + + + I A +L ++K + T+ + D S E Sbjct: 14 QTPCFIFDLEAVKERVKKMREIVGGA-YQLCYSIKANPF--LIPTMAEITDKLEVCSPGE 70 Query: 63 VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + Y+ K DA+ ++ ++ A K KK+ Sbjct: 71 LSICKALRVEPTKILYSGVNKTEVDVTDAMEYGVIHYTAESLLHMDIVNQVAGKYQKKVE 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE-------NKSF 172 + + ++ S + V G+ + + K Sbjct: 131 ILPRLNAGSQ-----FGMSKEDLFSIYANEEKYSNVI-VKGIHYFAGTQRKKNDKQIKEL 184 Query: 173 LCFSAMLKNIEKEFGHFITQIEW-ISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--VQI 229 ++K I+ F + QIE+ L + D + + E ++ S V + Sbjct: 185 DVLLELIKEIQTTFNRKVEQIEYGPGLSVPLFEGDDFSDTLKPLENIHEKLKELSGVVDL 244 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ-------ESATIY 282 +E G T T T +D N + H+ Y + Sbjct: 245 TIEMGRFYSTFCGTYLTRAMDCKSNEGVNYCIVDGGMNHLNYYGQMMGMKVPHIQHLHAC 304 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPT 341 N +CG C D+ + ++ GD ++F + Y++ F MP Sbjct: 305 DNRIEKNWCLCGSLCTTADVLVRDVTLQGLQEGDYLAFNNCGAYSVTEGIHLFLSRTMPL 364 Query: 342 IAVKNVDGTIKAIR--EFSY 359 I ++ + R + SY Sbjct: 365 ILLRTAENKYIVARQMQESY 384 >gi|83941445|ref|ZP_00953907.1| hypothetical protein EE36_04413 [Sulfitobacter sp. EE-36] gi|83847265|gb|EAP85140.1| hypothetical protein EE36_04413 [Sulfitobacter sp. EE-36] Length = 214 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 106/186 (56%), Positives = 130/186 (69%), Gaps = 2/186 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPYYLIDK +L N++ ++R+ +G K LLALKCFA W +FD + QYMDG+TSSSLY Sbjct: 1 MKTPYYLIDKSRLQANMEKIAWLREASGAKSLLALKCFATWSVFDFMAQYMDGSTSSSLY 60 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 EV LG+EKFGGETHAY+VAY D EI VL+N D IIFN++ QL++F A GLR Sbjct: 61 EVKLGYEKFGGETHAYSVAYDDDEIAEVLANSDKIIFNSIGQLDRFD--AASAGHTRGLR 118 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +NP VS S+F LADP RPFSRLGE +I + + GLMFHNNCEN F F+ ML Sbjct: 119 VNPGVSTSEFDLADPARPFSRLGEHDPAQIAAVADRITGLMFHNNCENDDFDRFADMLTL 178 Query: 182 IEKEFG 187 IE Sbjct: 179 IEDALA 184 >gi|262277735|ref|ZP_06055528.1| lysine/ornithine decarboxylase [alpha proteobacterium HIMB114] gi|262224838|gb|EEY75297.1| lysine/ornithine decarboxylase [alpha proteobacterium HIMB114] Length = 394 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 112/353 (31%), Gaps = 27/353 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P Y K L + D +L A+KC + TL + ++S+ E+ Sbjct: 19 PVYCFRKHSLKLSADWFNNNFPG---DVLYAVKCNPTEAVVKTLIKNGIKNFDAASIDEI 75 Query: 64 MLGHEKFGGETHAYNVA---YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119 L + + + F++ +L+K Sbjct: 76 KLIKKLSPKSKIYFMHTVKKESSIKEAYFYHGVKAYSFDSKEELDKILKVTNNAKDLELF 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRI S +S+ L+ + + K G FH + + +S + Sbjct: 136 LRIQTSNEHSEIDLSKKFGASINEAVSLSKIAKVKSKKF-GFSFHVGSQCMHPIAYSKAI 194 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-------KYSVQIYLE 232 K++ + I++GGG T D + +E ++ + ++ E Sbjct: 195 KDLGNIIKKSNIIPDIINVGGGFPTTYPDLYPQPIQNYFQEITQALNKLNLTKTPKLICE 254 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI-------YPNT 285 PG A+V + +T++ + K + ++ + D + P+ Sbjct: 255 PGRALVAESG---STIVRVELKKKQHLYINDGTYGSLFDAGTPRFIFPTKAIQIENTPSK 311 Query: 286 GPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 G +C D G F + GD I + Y ++ + FNG Sbjct: 312 RLVPYSFYGPTCDGLDYMKGPFMLPSNINSGDYIEIGQLGAYGMSLRTNFNGF 364 >gi|196000702|ref|XP_002110219.1| hypothetical protein TRIADDRAFT_53993 [Trichoplax adhaerens] gi|190588343|gb|EDV28385.1| hypothetical protein TRIADDRAFT_53993 [Trichoplax adhaerens] Length = 503 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 106/348 (30%), Gaps = 18/348 (5%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + L++ ++ + V+ A+KC + L +S+ E+ L Sbjct: 135 FMLVNIGNIIERYREWK--MRLPNVEPFYAVKCNNDPVLLRILINLGVNFDCASMAEMQL 192 Query: 66 GH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y K A +N + +F+ +L+K K + + Sbjct: 193 ILDAGVHPDRIVYANTIKAVSHLRFAKENNINHTVFDNEDELHKIKKYHPNAKLALRICP 252 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S+F L R S +V G+ FH + + + + + Sbjct: 253 DMKSCESRFQLGIKFGAPERDVAHLLKVARSLSLDVMGVSFHVGSDCLNPIGYEKAIIAS 312 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEP 233 +K F F + + +GGG + + + F + V+I EP Sbjct: 313 KKIFKLAEKFGYHFKELDIGGGFTASSALEMTFEKAAVTISKALQEHFPPESGVRIIAEP 372 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293 G T T+ ++ K + Y + + Sbjct: 373 GRFFPTRAYTIVLNIIGKRVVRKGNNDPFDLEHENAHLYENTSDIEKVLYYVNESVYGSI 432 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 G L + KP+ GD I FE++ Y++ FN P Sbjct: 433 GFITLDPTLII----LKPLNAGDWIYFEELGAYSLVLATEFNSFKKPK 476 >gi|149024019|gb|EDL80516.1| rCG31109, isoform CRA_a [Rattus norvegicus] Length = 459 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 34/353 (9%) Query: 6 YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 +++ D + + Y+ V+ A++C ++ G+ L + G + +S E+ Sbjct: 41 FFVADLGAVVRKHFCFLKYL---PRVRPFYAVRCNSSLGVLKVLAELGLGFSCASKAEME 97 Query: 65 LG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L H K + + + +++ K K+ L I Sbjct: 98 LVQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA 157 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S+S L+ + + + V G+ FH ++ + + Sbjct: 158 TQDSHSLNHLSLRFGASLKSCRHLLENAKQSHVEVVGVSFHIGSGCPDPQAYAQSIADAR 217 Query: 184 KEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 F + + LGGG + +D F E V I E G Sbjct: 218 LVFQMGAELGHTMNILDLGGGFPGLEGAKVRFEDMASVINSALDLYFPEGCGVDILAELG 277 Query: 235 EAIVTNTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288 VT+ T+ VLD + S+ H+ + + ++ ++ NT P Sbjct: 278 RYYVTSAFTVAVSIVAKKEVLDQPSREEQTGAAPKSIVYHLDEGVYGVFNSVLFDNTCPT 337 Query: 289 TA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 A + G + D E + +++GD + F+++ Y Sbjct: 338 PALQKKPSADQPLYSSSLWGPAVDGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 390 >gi|167572157|ref|ZP_02365031.1| putative diaminopimelate decarboxylase [Burkholderia oklahomensis C6786] Length = 418 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 105/356 (29%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D ++ ++N++ ++ ++ A+K + L + + G + S Sbjct: 49 PLFLYDPRRAVDNVERLRGALGGLQDGDFRIHYAMKANRFRPLLSELRRSPIFGVDACSP 108 Query: 61 YEVMLGHE-KFGGETHAYNV--AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E +Y D + +T+S + ++ Sbjct: 109 EELREALACGFAPERISYTAHGMMPDEAALLAALPDVHVNCDTLSAIALLGSRSPGREIG 168 Query: 118 IGLRINPSVSYSKFILADPNRPF-SRLGEKCKD----KIESEIKNVNGLMFHNNCENKSF 172 I + + Y ++ G + + + H + Sbjct: 169 IRVNPGVGIGYGDSERLSYAGATVTKFGIYAEQFGAALELAARHGLTVTWLHCHAGCGYL 228 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGG-------IHFTDKDYPVKDFCQRLKEFSEKY 225 A + + F+ ++ + TD+ ++ + + + Sbjct: 229 DPQLASFERVLDALDTFVARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGRR 288 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + I +EPG+ I + L V + + + + + I Sbjct: 289 PLSIAIEPGDFIAKDGGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCI 348 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++G PV+ GD ++ + GY + + Sbjct: 349 RRPGAAQSVCVAGNINEALDLWGSDVSLPPVEPGDFVALLNAGGYASSMSSNHCLR 404 >gi|314912082|gb|ADT63774.1| arginine decarboxylase [Rattus norvegicus] Length = 459 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 113/353 (32%), Gaps = 34/353 (9%) Query: 6 YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 +++ D + + Y+ V+ A++C ++ G+ L + G + +S E+ Sbjct: 41 FFVADLGAVVRKHFCFLKYL---PRVRPFYAVRCNSSLGVLKVLAELGLGFSCASKAEME 97 Query: 65 LG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L H K + + + +++ K K+ L I Sbjct: 98 LVQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA 157 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S+S L+ + + + V G+ FH ++ + + Sbjct: 158 TQDSHSLNHLSLRFGASLKSCRHLLENAKQSHVEVVGVSFHIGSGCPDPQAYAQSIADAR 217 Query: 184 KEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 F + + LGGG + ++ F E V I E G Sbjct: 218 LVFQMGAELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEGCGVDILAELG 277 Query: 235 EAIVTNTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288 VT+ T+ VLD + S+ H+ + + ++ ++ NT P Sbjct: 278 RYYVTSAFTVAVSIVAKKEVLDQPSREEQTGAAPKSIVYHLDEGVYGVFNSVLFDNTCPT 337 Query: 289 TA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 A + G + D E + +++GD + F+++ Y Sbjct: 338 PALQKKPSADQPLYSSSLWGPAVDGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 390 >gi|62079257|ref|NP_001014283.1| hypothetical protein LOC366473 [Rattus norvegicus] gi|50925583|gb|AAH78981.1| Similar to ornithine decarboxylase-like protein [Rattus norvegicus] Length = 494 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 113/353 (32%), Gaps = 34/353 (9%) Query: 6 YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 +++ D + + Y+ V+ A++C ++ G+ L + G + +S E+ Sbjct: 41 FFVADLGAVVRKHFCFLKYL---PRVRPFYAVRCNSSLGVLKVLAELGLGFSCASKAEME 97 Query: 65 LG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L H K + + + +++ K K+ L I Sbjct: 98 LVQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA 157 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S+S L+ + + + V G+ FH ++ + + Sbjct: 158 TQDSHSLNHLSLRFGASLKSCRHLLENAKQSHVEVVGVSFHIGSGCPDPQAYAQSIADAR 217 Query: 184 KEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 F + + LGGG + ++ F E V I E G Sbjct: 218 LVFQMGAELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEGCGVDILAELG 277 Query: 235 EAIVTNTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288 VT+ T+ VLD + S+ H+ + + ++ ++ NT P Sbjct: 278 RYYVTSAFTVAVSIVAKKEVLDQPSREEQTGAAPKSIVYHLDEGVYGVFNSVLFDNTCPT 337 Query: 289 TA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 A + G + D E + +++GD + F+++ Y Sbjct: 338 PALQKKPSADQPLYSSSLWGPAVDGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 390 >gi|320354385|ref|YP_004195724.1| Diaminopimelate decarboxylase [Desulfobulbus propionicus DSM 2032] gi|320122887|gb|ADW18433.1| Diaminopimelate decarboxylase [Desulfobulbus propionicus DSM 2032] Length = 404 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 111/359 (30%), Gaps = 24/359 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYM-DGTTS 57 TP ++ +++ NL+ AG LL A+K + L Q G + Sbjct: 37 GTPAFVYSAERVRQNLERLHAALSGAGLAGRFSLLYAMKANRFAPLLTFLRQSGLCGIDA 96 Query: 58 SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 S EV F ++ L+ + + S A K Sbjct: 97 CSPAEVEHAVSCGFSPAQISFTATSLSTRDLTALARYPGLFMDCDSLHAIRCWGALKPGT 156 Query: 117 KIGLRINPSVS---YSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNC 167 +IGLR+NP++ + L ++ G + E+ V + FH C Sbjct: 157 QIGLRVNPAMGIGRAANDKLHYAGATTTKFGIYWEQFAEALETAKAYDLQVRKIHFHTGC 216 Query: 168 ENKSFL-CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222 + + F ++E +++GGG+ + + + L+ Sbjct: 217 GYLTPQLEQLERIIAHCFRFVEAAGEVERVNIGGGLGVPHLDSDRPLDLDRWAAILQGQF 276 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY----QES 278 + + +EPG+ ++ + L + + + P+ Y Q Sbjct: 277 AGRGLHVEIEPGDYLLKDAGLLLVEKTFVERKKDRTFVGVDAGFNIAPEPAYYALPFQPL 336 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 Y + V G A D++ E + + ++ + Y+ + Sbjct: 337 PLRYDPSPCTEMSVVGNINEALDVWYEQAWLPDLSSQSHLALINAGAYSSAMASHHCLR 395 >gi|83716834|ref|YP_440283.1| diaminopimelate decarboxylase [Burkholderia thailandensis E264] gi|83650659|gb|ABC34723.1| diaminopimelate decarboxylase, putative [Burkholderia thailandensis E264] Length = 907 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 101/356 (28%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ ++N+ + + A+K + L + + G + S Sbjct: 538 PVFLYDPQRAVDNVARLQRALGDLQRGDFHVYYAMKANRFRPLLSELRRSPIFGIDACSP 597 Query: 61 YEVMLGHE-KFGGETHAYNV--AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E +Y D + +T+S + ++ Sbjct: 598 EELREALACGFAPERISYTAHGMMPDEAALLAALPDVHVNCDTLSAIALLGSRSPGREIG 657 Query: 118 IGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIKN------VNGLMFHNNC--- 167 I + + Y ++ G + + V L H C Sbjct: 658 IRVNPGVGIGYGDSERLSYAGATITKFGIYAEQFGAALELAARHGLTVTWLHCHAGCGYL 717 Query: 168 --ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + SF L LG TD+ ++ + + Sbjct: 718 DAQLDSFERVLDALDAFVARAPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 777 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + + +EPG+ I + L V + + + + + + Sbjct: 778 PLALAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 837 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + G A D++G+ PV+ GD ++ + GY + + Sbjct: 838 RRPGPTQSVCLAGNINEALDVWGDDVSLPPVEPGDFVALLNAGGYASSMSSNHCLR 893 >gi|76818637|ref|YP_337010.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710b] gi|76583110|gb|ABA52584.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710b] Length = 462 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 109/356 (30%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ L+N+ + +L A+K + L + + G + S Sbjct: 93 PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 152 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ F E +Y + A+L+ + N + ++ ++IG Sbjct: 153 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 212 Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNC--- 167 +R+NP V + ++ G + V L H C Sbjct: 213 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 272 Query: 168 --ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + +SF L LG TD+ ++ + + Sbjct: 273 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 332 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + I +EPG+ I + L V + + + + + + Sbjct: 333 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 392 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++G PV+ GD I+ + GY + + Sbjct: 393 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 448 >gi|218779354|ref|YP_002430672.1| Orn/DAP/Arg decarboxylase 2 [Desulfatibacillum alkenivorans AK-01] gi|218760738|gb|ACL03204.1| Orn/DAP/Arg decarboxylase 2 [Desulfatibacillum alkenivorans AK-01] Length = 390 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 47/374 (12%), Positives = 109/374 (29%), Gaps = 31/374 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ + + N+ + + K+L ++C + L+Q G + Sbjct: 17 LDTPCFVYNLDIIEKNIQKLRQVLRPD--KILFGVRCNPLPQVLKILHQNQCGFDVGNPA 74 Query: 62 EVMLGHEKFGGETHAYNVAYK---DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + G +N + + ++ SQ+ A + K+ Sbjct: 75 ELEYVKQVAGDGADCFNGCPIASAESVKEMYAQGFRIFSADSASQVENL--AANAPNAKV 132 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 +R++ S + S + + D + V GL FH + + + A Sbjct: 133 LIRVSSSNAGSVIADSHRLGVEESHANRLLDYAATRGLEVCGLSFHPGSQCGNLENWKAG 192 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQI---YLEP 233 + + + ++ + + GG +++ KY +++P Sbjct: 193 ISTCARLAREY-PSLKILHIAGGFPALYQGSAPDACTVADAIRQAIGKYYPFTPVLWMQP 251 Query: 234 GEAIVTNTTTLNTTVLDISENIKNL----VIVDSSVEAHVPDYLLYQESATIYPNTGP-- 287 + + TT + E+ + + + Sbjct: 252 SRFLTADAAVTLTTAVHTDESCYPRRLFVDASVFAGHGEILTMNNRLQYPICGLAPASRF 311 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIG-------DRISFEDVAGYNINR-----KNWFN 335 Y V G + D F V++ RI + Y + + FN Sbjct: 312 YHYQVHGCTSSGVDTFAADALLPEVRVDHVNPSRSSRIVICNAGAYCASFVRNSVRTGFN 371 Query: 336 GINMPTIAVKNVDG 349 G P + + Sbjct: 372 GSKAPGLYFLKGEE 385 >gi|158523253|ref|YP_001531123.1| Orn/DAP/Arg decarboxylase 2 [Desulfococcus oleovorans Hxd3] gi|158512079|gb|ABW69046.1| Orn/DAP/Arg decarboxylase 2 [Desulfococcus oleovorans Hxd3] Length = 420 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 120/388 (30%), Gaps = 52/388 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P Y+++ L+ K A+K + TL G SS Sbjct: 40 GSPLYVLEPDVLVRQAQAFQGAFSAKLPDPGFFFAVKSNNCPEVSKTLVSCGFGLDVSSG 99 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ + + T ++ K E A T++ ++ ++ + + A Sbjct: 100 EELAMALD-TEATTIVFSGPGKTTEELALAVANRGRVTVLIDSFGEMERLEAVAATAQTT 158 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFL 173 + + + + R F L E+ D N+ GL FH + Sbjct: 159 VLAGVRLTTAADG-----LWRKFGILPERLADFYETSKTCGHVNLAGLQFHTSWNLDPKA 213 Query: 174 CFSAMLKNIEKEFGH---FITQIEWISLGGGI---------------------------H 203 + + + FI Q+ +I +GGG H Sbjct: 214 HVAFIERLGAVLARMPITFIRQLAFIDIGGGFWPEQGEWLHHPEGTPADPKTSFSHVRPH 273 Query: 204 FTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 F P+ DF + E ++ I +EPG + L V+D + + Sbjct: 274 FRLPARPITDFAGAIGEAVRRHIFPVADVRICMEPGRWVCHPAMQLLMRVIDRKADDLVV 333 Query: 259 VIVDSSVEAHVP-DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 ++ + + P+T ++ G C D++G +F K + GD Sbjct: 334 TDAGTNAIGWERFETDYFPVLNLSRPDTREQPCLILGSLCTPHDVWGFGYFGKNIAEGDI 393 Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVK 345 + Y + + F +P + + Sbjct: 394 LLIPAQGAYTYSLRQNFI-KPLPRLVIL 420 >gi|301774454|ref|XP_002922649.1| PREDICTED: antizyme inhibitor 1-like [Ailuropoda melanoleuca] Length = 448 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 109/371 (29%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ I +K +KC + + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKIGVNIMTCDNEVELKKISRNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G F + + +GGG + V L F E V+I EPG V Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGVKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFSSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ +++ + FN Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAFND 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 FQRPAIYYMMS 408 >gi|194215024|ref|XP_001494034.2| PREDICTED: antizyme inhibitor 1 isoform 2 [Equus caballus] Length = 447 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 111/370 (30%), Gaps = 30/370 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ I +K +KC +A + + L G S+ E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSTKSEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQAYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G F + + +GGG + V L F E+ ++I EPG V Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEESGIKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + + +Y Sbjct: 278 SSAFTLAVNIVAKKVVENDKLCSGVEKTGSDEPAFMYYMNDGVYGFASKLSEDLNTFPEV 337 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 338 HKKYKEDEPLFTSSLWGPSCDELDQIVENCLLPELNVGDWLIFDNMGADSFHEPSAFNDF 397 Query: 338 NMPTIAVKNV 347 P + Sbjct: 398 QRPAVYYMMS 407 >gi|320329052|gb|EFW85051.1| ornithine decarboxylase, putative [Pseudomonas syringae pv. glycinea str. race 4] gi|330885445|gb|EGH19594.1| ornithine decarboxylase [Pseudomonas syringae pv. glycinea str. race 4] Length = 371 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 108/351 (30%), Gaps = 24/351 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64 +Y +D + + N +L A+K + + L+Q +SL EV Sbjct: 16 FYTVDPRWITRNAQQFSGCFPGT---VLYAMKANPLEQVLEALSQGGINHFDVASLAEVQ 72 Query: 65 LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 H K + + ++ +L+K +D + I L Sbjct: 73 TVHNTLPTAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTISLF 132 Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S S + L + ++ S GL FH + + A L Sbjct: 133 VRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTDWSLGLSFHVGSQAIEDGPWLAAL 192 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233 + + + + +GGG + C ++ + + E Sbjct: 193 NDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCDHIQTSPTLKDLNLICEA 252 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT---- 289 G +V +L VL E + Q A ++ + PYT Sbjct: 253 GRGLVYGGMSLFARVLSRREQSVFCG--AGIFGGLLSAQQWLQFPARVWRDGTPYTGAAE 310 Query: 290 --AMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C + D + ++ D + F+ Y+++ + FNG Sbjct: 311 NTFNIVGPTCDSMDRLAFPYSLASDIRESDWLEFQSTGAYSVSLRTPFNGF 361 >gi|269964929|ref|ZP_06179099.1| Diaminopimelate decarboxylase [Vibrio alginolyticus 40B] gi|269830405|gb|EEZ84629.1| Diaminopimelate decarboxylase [Vibrio alginolyticus 40B] Length = 199 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 52/180 (28%), Gaps = 9/180 (5%) Query: 186 FGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I + +GGG+ P L +++ EPG AI N Sbjct: 7 LKAQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANA 66 Query: 242 TTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---ATIYPNTGPYTAMVCGRSC 297 L T V + I+D+++ + L T + G C Sbjct: 67 GILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVPVSPRKGEAQTYDLVGPIC 126 Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357 GD G+ ++ GD ++ Y + +N + + + + Sbjct: 127 ETGDFLGKDRALV-LQEGDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGKQSHLVRQRE 185 >gi|224046591|ref|XP_002200322.1| PREDICTED: ornithine decarboxylase antizyme inhibitor [Taeniopygia guttata] Length = 450 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 56/373 (15%), Positives = 116/373 (31%), Gaps = 33/373 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D KL+ N + +K +KC + G+ + L G SS E+ L Sbjct: 40 FYVGDLGKLVRNNVQWQNVMAP--IKPFYPVKCNSTPGVLEILGTLGVGFACSSKAEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E Y K + I + + K + K+ L I Sbjct: 98 VQDLGISPENIIYTNPCKQASQIKYAAKAGINIMTCDNDIELKKISRNHPNAKLLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + + G+ FH + K + L + Sbjct: 158 EDITAGEEMNMKFGTTLKNCRHLMECAKELGVQIVGVKFHVSGSCKDLQTYIHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 F F ++ + +GGG ++ ++ F ++ + + EPG V Sbjct: 218 VFDMAEEFGFKMNMLDIGGGFTGSELQLEEVNHVIRPLLDVYFPKESGINVIAEPGCYYV 277 Query: 239 TNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLY-------------------- 275 ++ TL V+ + + V+ + P + Y Sbjct: 278 SSAFTLAVNVIAKKTVEYDKFLPSGVEQTRNDDEPVFTYYINDGVYGSFASKLSEKLNTI 337 Query: 276 -QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + + + + G SC D E + +GD + F+++ + ++ F Sbjct: 338 PEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELSVGDWLIFDNMGSGTLGEQSTF 397 Query: 335 NGINMPTIAVKNV 347 N P I Sbjct: 398 NDYQRPLIYYMMS 410 >gi|116335079|ref|YP_802574.1| diaminopimelate decarboxylase [Candidatus Carsonella ruddii PV] gi|116235360|dbj|BAF35208.1| diaminopimelate decarboxylase [Candidatus Carsonella ruddii PV] Length = 398 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 56/379 (14%), Positives = 129/379 (34%), Gaps = 25/379 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-V 63 P Y+ D +K+L NL Y+ K + ++K + ++ + S+ E + Sbjct: 25 PIYIYDFKKILKNL----YLIKKTKIFCFYSIKTNNNKFLLKLISNIIKKFDIVSIEEFL 80 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + ++ + K + N + I ++ +L K K K I L Sbjct: 81 NIIYINKKKTYIIFSGSGKSISEILISINLNIFSINIESIQELFKIFFFCNKHKKNINLM 140 Query: 122 I--NPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173 I NP++ + ++ G + I+ N G FH + Sbjct: 141 IRLNPNIDSCSHNKISTGKNTNKFGINISNIKHFLLIIKITKLNFIGYDFHIGSQICRLS 200 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGG----IHFTDKDYPVKDFCQRLKEFSEKYS--V 227 + K I+ + ++ ++ +GGG + + + ++ + +K+ +KY+ Sbjct: 201 PLKKLFKTIKLINDY--KKVNFVDIGGGKNINYYENNININFNNYYRSIKKLIKKYNLSF 258 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG 286 ++ +E G N+ + + V + N + + + + + + N G Sbjct: 259 KLIIELGRFFFGNSCIILSKVNYLKFNKIFKIAILNVGMNDIMRPAIYNSYHKIESNNIG 318 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 V G C + D F + I Y+ + +N V Sbjct: 319 YKIKNVFGPICESSDKFY-NSKYIKINSNSLIIVYSCGSYSKVMSSNYNSKKKIFDIVVY 377 Query: 347 VDGTIKAIREFSYNDYYNN 365 + ++ +N+ +N Sbjct: 378 KNKIKIVYKKEKFNNLISN 396 >gi|328875253|gb|EGG23618.1| group IV decarboxylase [Dictyostelium fasciculatum] Length = 435 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 48/396 (12%), Positives = 113/396 (28%), Gaps = 46/396 (11%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66 + + + A+K + + G +S E+ + Sbjct: 36 VYNLDHFRALAKESNDRFNGIQTM---AVKSNPVMSLLKEAIKSGLGAEVASFGELKIAE 92 Query: 67 HEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI------G 119 F + Y + E++ ++ I + ++++ + +KL +K G Sbjct: 93 LAGFTPDKIIYDSPIKTIQELEYAINLGVVINVDNFQEMDRVVEIVEKLDEKKKSTLVIG 152 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI------ESEIKNVNGLMFHNNCE----N 169 +R+NP V K+ P S+ G D ++ + G+ H + Sbjct: 153 IRVNPQVQAGKYADLSTGVPTSKFGIGLDDSRERIISYYTQYNWMRGVHLHVGSQGFEMY 212 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFS 222 ++ ++ +++ G QI +++GGG+ + Sbjct: 213 QTSDAVVKVMSLVKEINGLTNNQITHVNVGGGLSVNFDTEQDKPTFTDYSTHLKERIPEL 272 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLYQES--- 278 S + E G + + + V ++ + V + + + Sbjct: 273 FDGSFTLISEFGRSYWAKCGVVISQVEYAKKSGGRDIAVVHAGANLYIRTIYQHPLWKLR 332 Query: 279 --------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 G + G C A D+ + + GD + D Y + Sbjct: 333 VTVFDSTGVYQDGKDGASVMDLAGPCCFAADLLVKERLLPTINKGDYVMVHDSGAYFYSS 392 Query: 331 KNWFNGINMPTIAVKNV------DGTIKAIREFSYN 360 + +N P I D + + + Sbjct: 393 YSHYNLRLAPPIFAVESVDGKTYDSIKQIKKGETIE 428 >gi|291525897|emb|CBK91484.1| Diaminopimelate decarboxylase [Eubacterium rectale DSM 17629] Length = 434 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 52/426 (12%), Positives = 118/426 (27%), Gaps = 76/426 (17%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTS 57 M +TPYY+ D + G + L ++K + L + +D Sbjct: 1 MRQTPYYVFDTDEFAKRAAMIRAALDCKGGRRIPLCFSIKANPF--LLHRLPEGLDHVEV 58 Query: 58 SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL 114 S E+ + E+ Y+ K+ + ++ + L Sbjct: 59 CSPGELEICIALGVKPESIIYSGVMKEKCDIERAVSYGAGILTCESIRHAALISEV--ML 116 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167 + +K + ++ G +D V G+ +++ Sbjct: 117 ECIQEGAHEAEFAETKAHVILRLTSGNQFGMSLEDIEYIISHPDEFKGIAVMGIHYYSGT 176 Query: 168 E---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQ 216 + K + + + + + + G G+ + ++ + Sbjct: 177 QKSLRKINKDLEKIKSALTGLKEKYGFEPQLVEYGPGLCVEYFEEDWQEKEKQSLDEAAE 236 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV------- 269 L+EF+E+Y + +E G + + T V D+ + H+ Sbjct: 237 VLREFAEEYPLG--IEMGRFLAASCGKYYTQVKDLKSTGDANYAILDGGIHHLNYFGQRM 294 Query: 270 ----PDYLLYQESATIYPNT----------------------------------GPYTAM 291 P +Y+ + Sbjct: 295 AMQVPPISIYRADEIYFGEKLGEIKGTAGPIGNTFNDCEVSENEERTEEELTQLPDTDYT 354 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGT 350 +CG C D+ K +++GD + F Y++ F +P I + + Sbjct: 355 LCGSLCTVADVLVREVKLKKLELGDVLEFGHCGAYSVTEAPALFLSRQLPAIYAYSKEYG 414 Query: 351 IKAIRE 356 + +RE Sbjct: 415 YECLRE 420 >gi|320324002|gb|EFW80085.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. glycinea str. B076] Length = 406 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 108/351 (30%), Gaps = 24/351 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64 +Y +D + + N +L A+K + + L+Q +SL EV Sbjct: 51 FYTVDPRWITRNAQQFSGCFPGT---VLYAMKANPLEQVLEALSQGGINHFDVASLAEVQ 107 Query: 65 LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 H K + + ++ +L+K +D + I L Sbjct: 108 TVHNTLPTAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTISLF 167 Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S S + L + ++ S GL FH + + A L Sbjct: 168 VRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTDWSLGLSFHVGSQAIEDGPWLAAL 227 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233 + + + + +GGG + C ++ + + E Sbjct: 228 NDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCDHIQTSPTLKDLNLICEA 287 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT---- 289 G +V +L VL E + Q A ++ + PYT Sbjct: 288 GRGLVYGGMSLFARVLSRREQSVFCG--AGIFGGLLSAQQWLQFPARVWRDGTPYTGAAE 345 Query: 290 --AMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C + D + ++ D + F+ Y+++ + FNG Sbjct: 346 NTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTGAYSVSLRTPFNGF 396 >gi|71734011|ref|YP_274894.1| ornithine decarboxylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554564|gb|AAZ33775.1| ornithine decarboxylase, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 371 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 108/351 (30%), Gaps = 24/351 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64 +Y +D + + N +L A+K + + L+Q +SL EV Sbjct: 16 FYTVDPRWITRNAQQFSGCFPGT---VLYAMKANPLEQVLEALSQGGINHFDVASLAEVQ 72 Query: 65 LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 H K + + ++ +L+K +D + I L Sbjct: 73 TVHNTLPTAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTISLF 132 Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S S + L + ++ S GL FH + + A L Sbjct: 133 VRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTDWSLGLSFHVGSQAIEDGPWLAAL 192 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233 + + + + +GGG + C ++ + + E Sbjct: 193 NDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCDHIQTSPTLKDLNLICEA 252 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT---- 289 G +V +L VL E + Q A ++ + PYT Sbjct: 253 GRGLVYGGMSLFARVLSRREQSVFCG--AGIFGGLLSAQQWLQFPARVWRDGTPYTGAAE 310 Query: 290 --AMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C + D + ++ D + F+ Y+++ + FNG Sbjct: 311 NTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTGAYSVSLRTPFNGF 361 >gi|304312358|ref|YP_003811956.1| hypothetical protein HDN1F_27300 [gamma proteobacterium HdN1] gi|301798091|emb|CBL46313.1| Hypothetical protein HDN1F_27300 [gamma proteobacterium HdN1] Length = 426 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 117/391 (29%), Gaps = 34/391 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 YY +D K +N+ L + K+ + K + Q S E Sbjct: 23 YYWLDLPKFRSNVQRFLAAFQRYYPRTKIAYSCKTNYLPTLIQAAYQLGCLAEVVSATEY 82 Query: 64 MLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTV---SQLNKFKDKAQKLHKKI 118 + + YN + + ++V K + + Sbjct: 83 DIAKRVGIKPQDIIYNGPVKSASSLLNAFHEGAQVHIDSVTEAHLAAKLLSEHTGPEITL 142 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 G+R + + + + + + + G+ H + +S F Sbjct: 143 GIRCTFPIDGNTNSQFGLDPTDEQARQAIHTLLNAPRVRSAGVHAHFSTRERSIASFRER 202 Query: 179 LKNIEKEFGHFIT--QIEWISLGGGIHFTDK-------------DYPVKDFCQ-RLKEFS 222 + + I Q+ +I +GGG + LK Sbjct: 203 TEKLLHWAETLIPPKQLAFIDVGGGFFGPMPASLQASFGIEIPSYEDYAEAVAGTLKRKF 262 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQ 276 ++ +EPG A+V + T ++ + + + + + ++ Y Sbjct: 263 GNDGPELIIEPGAALVADVMGFCTEIVALKRSHGRVHGIVAGSLQNLRPTGRSTAPLPYH 322 Query: 277 ESATIYPNT--GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + N + A + G +C+ D+ + F+ + +GDR F ++ Y+ K F Sbjct: 323 YEPALERNDAIAAHDAKIMGNTCMETDVLLDG-FQGSLAVGDRFYFSNMGAYSWVFKPPF 381 Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 P I + + I +R + D Sbjct: 382 IA-PAPAIYCIDDEPPITLVRRAETAEDMLA 411 >gi|328882870|emb|CCA56109.1| Diaminopimelate decarboxylase [Streptomyces venezuelae ATCC 10712] Length = 441 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 56/377 (14%), Positives = 107/377 (28%), Gaps = 39/377 (10%) Query: 27 NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY--NVAYKDC 84 A V A+K + L+ G +S E+ L TH + A Sbjct: 53 EAHVLHAFAVKAAPLVPVLRLLHAAGLGVEVASPGELALARAAGVPPTHTVLDSPAKTPA 112 Query: 85 EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIGLRINPSVSYSKFILADPNRPFSR 142 E+ L+ + + + +L + +GLR+NP V S+ Sbjct: 113 ELRQALALGIAVNADNLQELARLDALVASAPTASPLGLRVNPQVGAGSIGALSTATATSK 172 Query: 143 LGEKCKD--------KIESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFI 190 G +D + E + L H + + E+ Sbjct: 173 FGVALRDEGARKTVVQAYLERPWLTRLHTHTGSQGVPLALMAAGVGEVYALAEEINRAAG 232 Query: 191 TQ-IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-------SVQIYLEPGEAIVTNTT 242 Q I+ + +GGG+ ++ E G +++ Sbjct: 233 RQQIDTLDIGGGLPVNFASDEETPTYAEYARLLADTVPGLFDGRYRLVTEFGRSLLAKHG 292 Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHV---------PDYLLYQESATIYPNTGPYTAM-V 292 T+ V + + V + + + P TG T V Sbjct: 293 TVLARVEYTKTSGGRPIAVTHAGVQLATRTVYAPESWPLRVLAYDSEGRPRTGDVTVQDV 352 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI--AVKNVDGT 350 G +C AGD+ + GD ++ D Y + +N + P + + DG Sbjct: 353 AGPACFAGDLLATGRALPLLHPGDVVAVPDTGAYYFSHHYAYNSLLRPPVHGFTVDEDGA 412 Query: 351 IK---AIREFSYNDYYN 364 + + + + Sbjct: 413 VVFAAVRKPQTLAEIVA 429 >gi|328947882|ref|YP_004365219.1| Diaminopimelate decarboxylase [Treponema succinifaciens DSM 2489] gi|328448206|gb|AEB13922.1| Diaminopimelate decarboxylase [Treponema succinifaciens DSM 2489] Length = 389 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 55/385 (14%), Positives = 118/385 (30%), Gaps = 32/385 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+YL D + L N ++ +L A+K A + L S E Sbjct: 14 GTPFYLFDFEILKNRIELLNNKLPK-NAELCYAIKANAF--LLQALKDLKILFEVCSNGE 70 Query: 63 VMLGHEK-FGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + H+ ++ K E A + +TI ++ K+ A + + Sbjct: 71 LSICHKYNVNPNHIVFSGVVKTKEDIKNAWKMHVNTITLESLEHCRFLKEVANEENGDYI 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE--NKSFLCFSA 177 + +S + + + K + + N G+ + + + K Sbjct: 131 QNVLIRLSS----GNQFGMSENDVLDALKILKQLKNVNFRGVHYFSGTQKKLKKIETEIQ 186 Query: 178 MLKNIEKEFGHF-ITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEKYSVQIYLE 232 +++ + I G G F P + + EK + +E Sbjct: 187 YIQDYCDNLQKMSGIEFNEIEYGPGFSFDYFAQPDFSENYNDFDAVAGLLEKSKYKFTIE 246 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPDYLLYQESATI 281 G I ++ + ++D+ + H +P L + + Sbjct: 247 AGRFIASSCGFYVSRIMDLKSTNDVNYCLIDGGINHLNYYGQIMGMKIPPVSLVKNNTDA 306 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMP 340 + + +CG C D+ + IGD + F+++ Y++ F +P Sbjct: 307 KSDKCA-SFEICGSLCTTADVITKCLSLDSPAIGDFLVFKNIGAYSVTEGIYLFLSHALP 365 Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365 + + S+ Y N Sbjct: 366 CVISYDKMEYKIL--RQSFETYKIN 388 >gi|315505089|ref|YP_004083976.1| orn/dap/arg decarboxylase 2 [Micromonospora sp. L5] gi|315411708|gb|ADU09825.1| Orn/DAP/Arg decarboxylase 2 [Micromonospora sp. L5] Length = 390 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 99/346 (28%), Gaps = 28/346 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P Y+ D L + V+LL A+K + TL +DG ++S E+ Sbjct: 4 PVYVHDLDALAGHARAIRAALP-PEVELLYAVKANPEPDVLRTLAPVVDGFETASRGELR 62 Query: 65 LGHEKFGGETHAYNVAY---KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIG 119 + A A+ + I + ++L + A ++ Sbjct: 63 RLAQVLPERAAAAYAGPGKTDADLAAALAAGVARIHVESPAELRRLGALAVSAGVRARVL 122 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-----NVNGLMFHNNCENKSFLC 174 LR+N + L RP G + + + V G+ H + L Sbjct: 123 LRVNLPLEAPGASLVMGGRPSP-FGMDPAEAVACARRPPAGVEVRGVHVHLASGLDAPLA 181 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIY 230 + + +GGG+ + + + L + Y Sbjct: 182 AMVAEAVVRWSVSEVGA--REVDVGGGMAVDYVDPAARFDWASYGRALAGVCDAYPGVRL 239 Query: 231 -LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYP----- 283 +EPG ++ T V+D+ + V + H+ Sbjct: 240 RVEPGRSVTAYCGAYLTEVIDVKRSYGEWFAVVAGGTHHLRTPAAKGHAQPFTVHQRYSG 299 Query: 284 ---NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 T V G+ C D+ PV + D + F Y Sbjct: 300 DGPCTDGGPVTVVGQLCTPKDVLSRTTHAGPVGVRDVLVFAMAGAY 345 >gi|303248030|ref|ZP_07334296.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio fructosovorans JJ] gi|302490587|gb|EFL50492.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio fructosovorans JJ] Length = 426 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 99/357 (27%), Gaps = 31/357 (8%) Query: 39 FAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAY-NVAYKDCEIDAVLSNCDTI 96 + L G ++SL EV L F + + A E+ +S + Sbjct: 52 NPLPPVLAFLAGLGAGAEAASLPEVRLALDAGFTAGRIVFDSPAKTFEELRLAVSLGLNV 111 Query: 97 IFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD----- 149 + + ++ + + + GLR+NP V + +S+ G D Sbjct: 112 NADNLDEVERLGTVGASLGRAPRAGLRVNPQVGLGRIKATSVAGVYSKFGVPLADREAIL 171 Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI-----EKEFGHFITQIEWISLGGGIHF 204 + + GL H + S A + I E ++ LGGG+ Sbjct: 172 AAFARCPWLEGLHVHIGSQGCSLDMLVAGVGAIYDLALEINARLGARRVRRFDLGGGLPV 231 Query: 205 TDKDYPVKD----FCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 +D + L E + E G + + V + + Sbjct: 232 AYRDTDDPPTPGVYAAALAERCPGLFSGQFDLVTEFGRFLHAPCGLAVSRVEYVKRQPGH 291 Query: 258 LVIV-DSSVEAHVPDYLLYQESATIYPNTGPY---------TAMVCGRSCLAGDIFGEFH 307 V + V + + P T + G C +GD Sbjct: 292 NTAVLHLGADMFVRECYNPELWTHGVTLLSPDGREKGGERGTWHLAGPLCFSGDFPIRQA 351 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 V GD ++ DV Y + + +N MP I D Sbjct: 352 RLPDVAPGDLVAIHDVGAYTLAMWSRYNSRQMPRILGYRQGRFNVLREREEPEDLVR 408 >gi|289663320|ref|ZP_06484901.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 429 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 100/354 (28%), Gaps = 29/354 (8%) Query: 21 ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79 + + +L A K A + TL ++DG ++S E+ H + + Sbjct: 41 WMRAQLPPRCELFYAAKANAEPPILRTLAAHVDGFEAASGGELAWLHAQQPQAALLFGGP 100 Query: 80 AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPS---VSYSKFILAD 135 D E+ + D + ++S+L + A + + + + + L Sbjct: 101 GKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVSVFLRMNIAVPGAQSTRLMM 160 Query: 136 PNRP-----FSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF 189 P + +++ + G FH + ++ + + Sbjct: 161 GGHPSPFGLDPCDLDTAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLHLIAAYLRTVQQW 220 Query: 190 ITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVT 239 ++ GGG + FC L ++ ++ LEPG + Sbjct: 221 RHTYALGPLRVNAGGGFGVDYLAPELSFDWAGFCAGLPALLHEHGTDLRLRLEPGRYVSA 280 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY-------TAMV 292 + VLD+ + V H G + Sbjct: 281 SCGWYLMEVLDLKRSHGAWFAVARGGTHHFRMPAAQAHDHPFRVLRGARAPVLRDTPVTL 340 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345 G+ C D+ + GD ++F Y N + F P + Sbjct: 341 VGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQHFLMHPAPQMVFL 394 >gi|155121993|gb|ABT13861.1| hypothetical protein MT325_M307L [Paramecium bursaria chlorella virus MT325] Length = 372 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 116/351 (33%), Gaps = 24/351 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D + + + I ++ A+KC + L +S E+ Sbjct: 19 FYVSDPKFVEHLTSVWSDIFPL--IQPFYAVKCNNDKVLLKVLADNGVNFDCASKNEITQ 76 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + K + A + + + F++ +L+K K+ + + +R Sbjct: 77 VLKLGVDSSRIIFAHTVKSPDSIVFAKQAGVNLMTFDSSFELDKIKNYHPEAKMVLRIRC 136 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + K K+ V+G+ FH +++ + LK+ Sbjct: 137 DDPHALVKLEKYGALADEIETLLGHAKKL---HIAVSGISFHVGSGSRNPDAYWKALKSA 193 Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEP 233 + + +++ I +GGG++ +D C +K+F V+ EP Sbjct: 194 REAYDIATAMGHKVDIIDIGGGMYADIEDNGTVSTCVAEYVRDGIKDFFSDTGVKFIAEP 253 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT-------IYPNTG 286 G + + L V+ + ++Y+++ + N Sbjct: 254 GRFFAQHYSVLACQVVGKRVRDGYYEYFVNESTYGGFSNVIYEKAVPEPIIVKDVGENDE 313 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + +++ G +C D+ + + I D I F Y FNG Sbjct: 314 KHMSVIYGCTCDGIDVINKQTHIPELNIDDWIYFPMWGAYTNCLVTSFNGF 364 >gi|198430947|ref|XP_002123875.1| PREDICTED: similar to putative ornithine decarboxylase [Ciona intestinalis] Length = 437 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 54/374 (14%), Positives = 110/374 (29%), Gaps = 23/374 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +YL D +++ NL ++ A+KC + + L G +S +E+ Sbjct: 49 FYLADLGQVVRNLQLWTKHM--PKIRPYYAMKCNPSQPVVQLLASLGVGFDCASKFEIET 106 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E + V K + + K K K+ LR+N Sbjct: 107 ALKCGVKPEDILFAVPCKMSSHIEYACQTGVQVMTVDNADELHKIKRIHPTGKLLLRLNV 166 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + D + + ++ G+ FH + SF L+ + Sbjct: 167 KYCGNGIKMGDKFGVTMSEARELILLCKELELDLIGVCFHPGSGSNSFETIRDSLQRCRE 226 Query: 185 EFGH---FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + + + +GGG + + F + + + EPG V Sbjct: 227 LYDFAKLIGNDFKIVDIGGGFVCGDNFIKISKQVNATIDRLFPPETGLTVIAEPGRFFVE 286 Query: 240 NTTTLNTTVLDISENIKNLVIV----DSSVEAHVPDYLLYQESATIYPNTGPYTAM---V 292 N T+V + + + + ++ V Sbjct: 287 NAFAFVTSVHGKAIRGDSAKYYIGSGVFAAFCLKYFEKFIRIPESLSRQADKCKCYASTV 346 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352 G + DI +I D F+++ Y+ FNG + G Sbjct: 347 YGPTGAGDDIVLCDSMLPEAQIDDWWLFDNMGAYSPLLSLGFNG------YMVTKAGFF- 399 Query: 353 AIREFSYNDYYNNL 366 I + ++N+ + L Sbjct: 400 -ISQDTWNEIADKL 412 >gi|34392272|emb|CAE46410.1| ornithine decarboxylase [Chlamydomonas reinhardtii] gi|34392274|emb|CAE46409.1| ornithine decarboxylase [Chlamydomonas reinhardtii] Length = 396 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 94/347 (27%), Gaps = 30/347 (8%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-MLGHEKFGGETHAY 77 V A+KC G+ LN G + E+ M+ + Sbjct: 22 QAWRAAMPR--VVPFYAVKCNPEPGILKLLNALGAGFDCACKGELDMMLRMGVSPNRIIF 79 Query: 78 NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN 137 K + + K K LRI ++ L Sbjct: 80 AHPCKRASDIRYAREHNVQYTTFDTVSELHKIAQMNPDFKCVLRIRADDPDARVPLGLKY 139 Query: 138 RPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI---TQIE 194 + + V G+ FH ++ FS + N K F +E Sbjct: 140 GAEVSEADVLLRTAKELGLQVVGVSFHVGSACQNLSTFSGAIVNARKVFDEAGALGFNME 199 Query: 195 WISLGGGIHFTDKDY--------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246 + +GGG + F + V++ EPG ++TL T Sbjct: 200 LLDIGGGFTGHFDEMGNVMFGVIANTINAALATNFPPEMGVRVIAEPGRYFAETSSTLLT 259 Query: 247 TV----------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------A 290 V + ++ + S + D P T + Sbjct: 260 PVYGQRDRVAADGSVKKDYWLTDGLYGSFNCILYDGQNPGYKVVRSPLMADSTDSRTFLS 319 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C + D + ++ GD + + + Y + FNGI Sbjct: 320 TLWGPTCDSADCVYKDVTLPVLRNGDWLMWNNAGAYTVAGACDFNGI 366 >gi|253988111|ref|YP_003039467.1| hypothetical protein PAU_00630 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779561|emb|CAQ82722.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 362 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 42/359 (11%), Positives = 107/359 (29%), Gaps = 23/359 (6%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 ++ ++ + ++ ++K + ++Q SS E+++ Sbjct: 8 FIYRLSEIKERYNELKSSI--PAHRIYYSIKANPNIEILTFISQLGLKAEVSSPGELIIA 65 Query: 67 H-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 F Y K + A + ++S+L+K +++ K RI Sbjct: 66 INAGFNPAYIVYGGPGKTIKDIDFAAEKGVNYFSLESLSELDKLDIVEKQIGKNFK-RIL 124 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLCFSAMLK 180 + + P S+ G ++ V G+ ++ + +++++ Sbjct: 125 RLFIPNNNGRLNMMMPNSKFGITLEEVKNYVANGDNDVYGIHLYSGTQINETGFRASVIQ 184 Query: 181 NIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 + ++++++ GGG+ + K K ++ E G + Sbjct: 185 TNQIVSEIESIIGYKLKYVNYGGGLEWPFMR-SGKPIISPTKVEGILPDIESCFEFGRYL 243 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-------PDYLLYQESATIYPNTGPY-- 288 V + L T +LD+ E +++ S+ + + Sbjct: 244 VASCGILETEILDVKERNGYQILIISAGINILNGISASGRLIHQQPDFHVSNNKNNNIML 303 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKN 346 + G C D + GD ++ + Y N + F Sbjct: 304 PTAIYGPLCTPVDYLTLNTLLPQLFQGDILTIPNCGAYAANTGISNFLMREPAQEITVE 362 >gi|307330569|ref|ZP_07609710.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] gi|306883818|gb|EFN14863.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] Length = 448 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 54/384 (14%), Positives = 111/384 (28%), Gaps = 46/384 (11%) Query: 26 KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY-NVAYKD 83 V A+K A + L G +S E+ L + + A Sbjct: 50 PGTPVLHAFAVKAAALVPVLRLLADEGLGCEVASPGELALARAAGVTPDRIVLDSPAKTP 109 Query: 84 CEIDAVLSNCDTIIFNTVSQLNKFKDKAQK---LHKKIGLRINPSVSYSKFILADPNRPF 140 E+ L + + +L++ +GLRINP V Sbjct: 110 EELREALDLGIALNADNPQELDRLGALVGDRADPPAPLGLRINPQVGGGSIDAMSTATAT 169 Query: 141 SRLGEKCKD--------KIESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGH 188 S+ G +D + +E + L H + + E+ G Sbjct: 170 SKFGVALQDPGAREWVVRTFAERPWLTRLHAHVGSQGCPLELMAAGIRVAYELAEEINGA 229 Query: 189 FITQ-IEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEKYS---VQIYLEPGEAIVTN 240 Q I+ + +GGG+ +++ Q L+ ++ E G +++ Sbjct: 230 VGRQQIDALDIGGGLPVNFASDEITPGYREYAQLLRTTVPGLFDGRYKLVTEFGRSLLAK 289 Query: 241 TTTLNTTVLD------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--------NTG 286 + + V + + ++ P+ + +A + G Sbjct: 290 SGLVLARVEYAKSAGGRLIAVTHAGAQLATRTVFAPEAWPLRVTAYDAEGRPKAGGSSDG 349 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + G C AGD+ + GD + D Y + +N + P I + Sbjct: 350 QVPQDIAGPCCFAGDLVARDRPLPELAAGDLVGLLDTGAYYFSNHFAYNSLPRPGIYGFD 409 Query: 347 VDGT-------IKAIREFSYNDYY 363 G+ + + ++ Sbjct: 410 ATGSTGDEVRFATVRKPQTVDEIV 433 >gi|169835507|ref|ZP_02868695.1| diaminopimelate decarboxylase [candidate division TM7 single-cell isolate TM7a] Length = 256 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 79/245 (32%), Gaps = 22/245 (8%) Query: 143 LGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF----GHFITQIEWISL 198 L + K +S G H + F L I K + +++ Sbjct: 6 LIDIVKRLNDSPYIEFKGFHTHIGSQIFQSAFFIFALDEIFKYLDRLKKELGIVVHTVNM 65 Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI-----------YLEPGEAIVTNTTTLNTT 247 GGG K+ + + Y+ + +EPG +IV N T Sbjct: 66 GGGFGVYYKNGDDPKPIEEVLSEIITYTEAMEIKYQIGFKELCIEPGRSIVGNAGTTLYE 125 Query: 248 VLDISENI--KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGD 301 V I E + K V +D + ++ L E N T + G+ C +GD Sbjct: 126 VGGIKETVGGKTYVFIDGGMSDNIRTALYQAEYEAGVVNKMEDTDTRDVTLAGKLCESGD 185 Query: 302 IFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360 I + K+GD ++ Y + +N + P + A+R SY Sbjct: 186 IIIQNGKLPKSTKVGDIVAVGTTGAYCYTMSSHYNRMVTPGVVFVKDGKAKVAVRRESYE 245 Query: 361 DYYNN 365 D N Sbjct: 246 DLLRN 250 >gi|190360585|ref|NP_001121960.1| antizyme inhibitor 1 [Sus scrofa] gi|187372906|gb|ACD03180.1| antizyme inhibitor 1 [Sus scrofa] Length = 446 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 112/370 (30%), Gaps = 30/370 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ I +K +KC + + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G F + + +GGG + V L F E ++I EPG V Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTQFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---------------------QE 277 ++ TL ++ + P ++ Y + Sbjct: 278 SSAFTLAVNIIAKKVVENKFSSGVGKTGSDEPAFMYYLNDGVYGSFASKLSEDLNTIPEV 337 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + +T+ + G SC D E + +GD + F+++ +++ + FN Sbjct: 338 HKKYKEDEPLFTSSLWGPSCDELDQIMENCLLPELNVGDWLIFDNMGADSLHEPSAFNDF 397 Query: 338 NMPTIAVKNV 347 P I Sbjct: 398 QRPAIYYMMS 407 >gi|217423075|ref|ZP_03454577.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 576] gi|217393983|gb|EEC34003.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 576] Length = 419 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ L+N+ + +L A+K + L + + G + S Sbjct: 50 PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ F E +Y + A+L+ + N + ++ ++IG Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169 Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 +R+NP V + ++ G + V L H C Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229 Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F L LG TD+ ++ + + Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGSR 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + I +EPG+ I + L V + + + + + + Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++G PV+ GD I+ + GY + + Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405 >gi|85708352|ref|ZP_01039418.1| diaminopimelate/ornithine decarboxylase [Erythrobacter sp. NAP1] gi|85689886|gb|EAQ29889.1| diaminopimelate/ornithine decarboxylase [Erythrobacter sp. NAP1] Length = 401 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 91/353 (25%), Gaps = 26/353 (7%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77 A Y + K+L A+K A + + L +S+ EV L + Sbjct: 30 RAAKYFVEKFPGKVLYAVKANPAPDLIEVLWDAGVTHYDVASIAEVRLVRGLLPDANLCF 89 Query: 78 NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------------AQKLHKKIGLRINPS 125 K A + + ++ L + + A L + LR++ Sbjct: 90 MHPIKRRRAIAEAYHEHGVKTFSLDTLEELEKIVEACSDPETGEPATDLRLCVRLRVSSE 149 Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185 S LA + + G+ FH + + F L Sbjct: 150 YSE--LSLASKFGCDLLEAPQLLQACRQHCDWL-GVCFHVGSQAMTPFAFVQALDRTRAA 206 Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN 245 I+ I +GGG + + E L Sbjct: 207 IAEASVVIDMIDVGGGFPSIYPGMEPPPLEDYFAIIHQHFYALPIAYNAELWCEPGRALC 266 Query: 246 TT----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-----YTAMVCGRS 296 ++ + + N + ++ + D + G + Sbjct: 267 AEYSSMIVRVEKRRGNELYINDGAYGALYDAAHVSWRFPVNALEDDLRDAVEDFAFYGPT 326 Query: 297 CLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 C D G F ++ GD I + Y K FNG I + + Sbjct: 327 CDDADYMAGPFPLPGDIQAGDFIEIGVLGAYGAAMKTGFNGFGDAEIVIVEDE 379 >gi|167921577|ref|ZP_02508668.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei BCC215] Length = 419 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ L+N+ + +L A+K + L + + G + S Sbjct: 50 PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ F E +Y + A+L+ + N + ++ ++IG Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169 Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 +R+NP V + ++ G + V L H C Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229 Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F L LG TD+ ++ + + Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGSR 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + I +EPG+ I + L V + + + + + + Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++G PV+ GD I+ + GY + + Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405 >gi|15858865|gb|AAL08050.1| ornithine decarboxylase-like protein variant 2 [Homo sapiens] gi|56202452|emb|CAI19355.1| arginine decarboxylase [Homo sapiens] gi|119627884|gb|EAX07479.1| arginine decarboxylase, isoform CRA_k [Homo sapiens] Length = 480 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 51/382 (13%), Positives = 118/382 (30%), Gaps = 57/382 (14%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L Q G + ++ E+ L Sbjct: 41 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H K + + + +++ K K+ L I Sbjct: 99 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 159 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG T+ + + F E V I+ E G Sbjct: 219 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 278 Query: 236 AIVTNTTTLNTTVLDI-------------------------------------------S 252 VT+ T+ +++ Sbjct: 279 YYVTSAFTVAVSIIAKKEVLLDQPGREAPLPPPHIATCAASEPSPPAEENGSTSKTIVYH 338 Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV 312 + I +S + ++ + Q+ + Y++ + G + D E + + Sbjct: 339 LDEGVYGIFNSVLFDNICPTPILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQL 396 Query: 313 KIGDRISFEDVAGYNINRKNWF 334 +GD + F+++ Y + + F Sbjct: 397 HVGDWLVFDNMGAYTVGMGSPF 418 >gi|53717037|ref|YP_106056.1| putative diaminopimelate decarboxylase [Burkholderia mallei ATCC 23344] gi|67639826|ref|ZP_00438658.1| putative diaminopimelate decarboxylase [Burkholderia mallei GB8 horse 4] gi|124381186|ref|YP_001025951.1| putative diaminopimelate decarboxylase [Burkholderia mallei NCTC 10229] gi|126446956|ref|YP_001078041.1| putative diaminopimelate decarboxylase [Burkholderia mallei NCTC 10247] gi|166999787|ref|ZP_02265617.1| putative diaminopimelate decarboxylase [Burkholderia mallei PRL-20] gi|237508192|ref|ZP_04520907.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei MSHR346] gi|254176386|ref|ZP_04883044.1| putative diaminopimelate decarboxylase [Burkholderia mallei ATCC 10399] gi|254200911|ref|ZP_04907276.1| putative diaminopimelate decarboxylase [Burkholderia mallei FMH] gi|254204874|ref|ZP_04911227.1| putative diaminopimelate decarboxylase [Burkholderia mallei JHU] gi|52423007|gb|AAU46577.1| putative diaminopimelate decarboxylase [Burkholderia mallei ATCC 23344] gi|126239810|gb|ABO02922.1| putative diaminopimelate decarboxylase [Burkholderia mallei NCTC 10247] gi|147748523|gb|EDK55598.1| putative diaminopimelate decarboxylase [Burkholderia mallei FMH] gi|147754460|gb|EDK61524.1| putative diaminopimelate decarboxylase [Burkholderia mallei JHU] gi|160697428|gb|EDP87398.1| putative diaminopimelate decarboxylase [Burkholderia mallei ATCC 10399] gi|235000397|gb|EEP49821.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei MSHR346] gi|238520434|gb|EEP83894.1| putative diaminopimelate decarboxylase [Burkholderia mallei GB8 horse 4] gi|243064101|gb|EES46287.1| putative diaminopimelate decarboxylase [Burkholderia mallei PRL-20] gi|261826192|gb|ABM99332.2| putative diaminopimelate decarboxylase [Burkholderia mallei NCTC 10229] Length = 419 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ L+N+ + +L A+K + L + + G + S Sbjct: 50 PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ F E +Y + A+L+ + N + ++ ++IG Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169 Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 +R+NP V + ++ G + V L H C Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229 Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F L LG TD+ ++ + + Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + I +EPG+ I + L V + + + + + + Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++G PV+ GD I+ + GY + + Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405 >gi|218134059|ref|ZP_03462863.1| hypothetical protein BACPEC_01949 [Bacteroides pectinophilus ATCC 43243] gi|217991434|gb|EEC57440.1| hypothetical protein BACPEC_01949 [Bacteroides pectinophilus ATCC 43243] Length = 416 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 57/399 (14%), Positives = 116/399 (29%), Gaps = 56/399 (14%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + +L + L+T I G+ +L A+K + +++ S E Sbjct: 14 GTPSYIFNVDELESRLNTIKQILGE-GIDVLYAMKANPF--LVPVMSRLGMRFEVCSPGE 70 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV----LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 + +E + + K+ +V A+K Sbjct: 71 FAICENEHVNMQDIVLSGVNKERADIEHVMDDCGGVGIYTVESVRHFQLLASMAEKRSTV 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 I + + + + E + ++ G+ + + K Sbjct: 131 IHVLLRV------TSGNQFGLDEEDIENIISKRDEFKYVDIRGIQCYTGTQKKKSDHIDK 184 Query: 178 MLKN----IEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKYS 226 + ++ + + + E G G+ + +Y + K + + Sbjct: 185 EIDWLDSLCDRLYEKYGYKAEEFEYGPGLFVSYFEPGVDNNNYDMLRALAA-KLDTIRDK 243 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH------------------ 268 I LE G I T V DI N + + H Sbjct: 244 YHISLEMGRYIAATCGLFLTRVEDIKYNKEQHYCIVDGGINHINYYGQTMAMKLPVTEHI 303 Query: 269 -----------VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 + D + + + G VCG C GD+ + +KIGD Sbjct: 304 PMDVDASKTFAMSDACALLGNELVQKSEGTVHWNVCGSLCTVGDVIVKNLELTDLKIGDM 363 Query: 318 ISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAIR 355 + F ++ Y++ F N+P I + + +R Sbjct: 364 LVFHNIGAYSVTEGIYLFLSRNLPNIIEYSSKNGARLLR 402 >gi|254358992|ref|ZP_04975264.1| putative diaminopimelate decarboxylase [Burkholderia mallei 2002721280] gi|148028179|gb|EDK86139.1| putative diaminopimelate decarboxylase [Burkholderia mallei 2002721280] Length = 419 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ L+N+ + +L A+K + L + + G + S Sbjct: 50 PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ F E +Y + A+L+ + N + ++ ++IG Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169 Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 +R+NP V + ++ G + V L H C Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229 Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F L LG TD+ ++ + + Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + + +EPG+ I + L V + + + + + + Sbjct: 290 PLALAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++G PV+ GD I+ + GY + + Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405 >gi|256395880|ref|YP_003117444.1| Orn/DAP/Arg decarboxylase 2 [Catenulispora acidiphila DSM 44928] gi|256362106|gb|ACU75603.1| Orn/DAP/Arg decarboxylase 2 [Catenulispora acidiphila DSM 44928] Length = 425 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 55/403 (13%), Positives = 109/403 (27%), Gaps = 42/403 (10%) Query: 4 TPY--YLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP ++ D Q + V A K + L ++ G SS Sbjct: 15 TPVAAFV-DLQGIEQTAAELRAAWPRETEVLHAFAAKANPMVPILALLLRHGLGCEVSSP 73 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQK--LHK 116 E+ F + K AV + + +L + Sbjct: 74 GELAQARAAGFPMARVVLDSPAKTQAELAVALRDGIALNIDNFEELERVDRLVADGAAAV 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE 168 ++G+RINP V ++ G D + + + H + Sbjct: 134 RVGVRINPQVGIGSIEAMSTAGRTTKFGIAMADPGNRQRLLAAYAARPWLRWVHVHVGSQ 193 Query: 169 ----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-PVKDFCQRLKEFSE 223 + + ++ ++ QIE I +GGG+ F + + Sbjct: 194 GIPLELNAAGVAEAVRFAQEVNARRDGQIEGIDIGGGLPVDFSTDGDSPTFADHVAVLRD 253 Query: 224 KYS------VQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPD 271 ++ E G +++T + + V + ++ P Sbjct: 254 AAPELFTGGFKVVTEYGRSVMTKNGFIASRVEYTKRTGGRAIALTHAGAQVAARTVFAPK 313 Query: 272 YLLYQE----SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + V G C AGD+ + D + D Y Sbjct: 314 SWPLRVLAYDRHGLPSTAELEVQDVAGPCCFAGDLVARERKLPRLATEDIVVVPDTGAYY 373 Query: 328 INRKNWFNGINMPTIA-VKNVDG---TIKAIR-EFSYNDYYNN 365 + +N + MP + + DG +R S ++ Sbjct: 374 FSSPFQYNSLPMPPVFGFEVSDGDVVRFHVLRAAESLDEVVAR 416 >gi|134280746|ref|ZP_01767456.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 305] gi|134247768|gb|EBA47852.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 305] Length = 419 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ L+N+ + +L A+K + L + + G + S Sbjct: 50 PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ F E +Y + A+L+ + N + ++ ++IG Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169 Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 +R+NP V + ++ G + V L H C Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229 Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F L LG TD+ ++ + + Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + + +EPG+ I + L V + + + + + + Sbjct: 290 PLALAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++G PV+ GD I+ + GY + + Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405 >gi|167896953|ref|ZP_02484355.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 7894] Length = 419 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ L+N+ + +L A+K + L + + G + S Sbjct: 50 PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ F E +Y + A+L+ + N + ++ ++IG Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169 Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 +R+NP V + ++ G + V L H C Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229 Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F L LG TD+ ++ + + Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGSR 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + I +EPG+ I + L V + + + + + + Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++G PV+ GD I+ + GY + + Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405 >gi|291548849|emb|CBL25111.1| Diaminopimelate decarboxylase [Ruminococcus torques L2-14] Length = 408 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 52/394 (13%), Positives = 110/394 (27%), Gaps = 43/394 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D L + + L A+K + Q+ D S+ E Sbjct: 14 GTPLYVFDLDILKEQTERIRAGF-GPEINLCYAMKANPFLT--GYMAQWSDRIEVCSMGE 70 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEID----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 + + + E + K + A N + F + +++ + Sbjct: 71 FRICRKLQVPPEKLFISGVMKKRDDIREILAYCGNRCAYTVESPLHFQYFVEWSEEHPED 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 LR+ P ++ D + L +K K+ E + ++ K Sbjct: 131 GILRLYPRLTSGNQFGMDEDTVLEIL-KKAKELPGIEAEGIHYFSGTQKKNLKRHQKELT 189 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-------KEFSEKYSVQIY 230 L K+ ++ + G G + + + ++ + Sbjct: 190 YLDEFLKKAAEEQIDVKCLEYGSGTAVPYFRDKTAETFEETGLKGLQDAVKAMQWKGHVT 249 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL----LYQESATIYPNT- 285 +E G A+ T V D + + + +Y+ + P Sbjct: 250 VELGRALAAMCGYYLTKVEDTKTSDGIHYCIVDGGCHQINYDGQIKGMYEPYVKVLPKEV 309 Query: 286 -------------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY----NI 328 T VCG C D+ + ++ G + FE Y + Sbjct: 310 SMKDAEDSEDKNTEEKTWKVCGSLCTLNDVLCNEITLRGLEKGSILVFERTGAYSAMEGM 369 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIR--EFSYN 360 F +P + + + + R + +Y Sbjct: 370 AL---FLSHELPGVVLYSEEEGWIQARVQQETYE 400 >gi|167818500|ref|ZP_02450180.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 91] Length = 419 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ L+N+ + +L A+K + L + + G + S Sbjct: 50 PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ F E +Y + A+L+ + N + ++ ++IG Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169 Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 +R+NP V + ++ G + V L H C Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229 Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F L LG TD+ ++ + + Sbjct: 230 DAQLESFERVLGALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + + +EPG+ I + L V + + + + + + Sbjct: 290 PLALAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++G PV+ GD I+ + GY + + Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405 >gi|53721338|ref|YP_110323.1| diaminopimelate decarboxylase [Burkholderia pseudomallei K96243] gi|126444939|ref|YP_001061533.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 668] gi|126455535|ref|YP_001074474.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 1106a] gi|167741322|ref|ZP_02414096.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 14] gi|167848398|ref|ZP_02473906.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei B7210] gi|167913634|ref|ZP_02500725.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 112] gi|242311330|ref|ZP_04810347.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 1106b] gi|254189383|ref|ZP_04895893.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei Pasteur 52237] gi|254195342|ref|ZP_04901770.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei S13] gi|254262869|ref|ZP_04953734.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 1710a] gi|254299440|ref|ZP_04966889.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 406e] gi|52211752|emb|CAH37751.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei K96243] gi|126224430|gb|ABN87935.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 668] gi|126229303|gb|ABN92716.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 1106a] gi|157809452|gb|EDO86622.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 406e] gi|157937061|gb|EDO92731.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei Pasteur 52237] gi|169652089|gb|EDS84782.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei S13] gi|242134569|gb|EES20972.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 1106b] gi|254213871|gb|EET03256.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 1710a] Length = 419 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ L+N+ + +L A+K + L + + G + S Sbjct: 50 PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ F E +Y + A+L+ + N + ++ ++IG Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169 Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 +R+NP V + ++ G + V L H C Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229 Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F L LG TD+ ++ + + Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + I +EPG+ I + L V + + + + + + Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++G PV+ GD I+ + GY + + Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405 >gi|167617008|ref|ZP_02385639.1| diaminopimelate decarboxylase, putative [Burkholderia thailandensis Bt4] gi|257140913|ref|ZP_05589175.1| diaminopimelate decarboxylase, putative [Burkholderia thailandensis E264] Length = 420 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 101/356 (28%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ ++N+ + + A+K + L + + G + S Sbjct: 51 PVFLYDPQRAVDNVARLQRALGDLQRGDFHVYYAMKANRFRPLLSELRRSPIFGIDACSP 110 Query: 61 YEVMLGHE-KFGGETHAYNV--AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E +Y D + +T+S + ++ Sbjct: 111 EELREALACGFAPERISYTAHGMMPDEAALLAALPDVHVNCDTLSAIALLGSRSPGREIG 170 Query: 118 IGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIKN------VNGLMFHNNC--- 167 I + + Y ++ G + + V L H C Sbjct: 171 IRVNPGVGIGYGDSERLSYAGATITKFGIYAEQFGAALELAARHGLTVTWLHCHAGCGYL 230 Query: 168 --ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 + SF L LG TD+ ++ + + Sbjct: 231 DAQLDSFERVLDALDAFVARAPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 290 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + + +EPG+ I + L V + + + + + + Sbjct: 291 PLALAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 350 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + G A D++G+ PV+ GD ++ + GY + + Sbjct: 351 RRPGPTQSVCLAGNINEALDVWGDDVSLPPVEPGDFVALLNAGGYASSMSSNHCLR 406 >gi|220926699|ref|YP_002502001.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060] gi|219951306|gb|ACL61698.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060] Length = 403 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 37/386 (9%), Positives = 89/386 (23%), Gaps = 39/386 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +L D L G A+K + L ++ G +S E++ Sbjct: 23 AFLHDLSALGEQARALRAPLP-PGTDFFYAVKANNDPQVLRALAPHVAGFEVASAGEIVR 81 Query: 66 GHEKFG-GETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G + + + + + A + I + + Sbjct: 82 VRQAVGSAARIVMGGPARTEGDIRTLLAFGVERLHVESAQAMRLANAVAARAGATIPVLL 141 Query: 123 NPSVS--------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 +++ S + + + G FH N+ Sbjct: 142 RVNLAGPVPGATLTMGGAATQFGIEQSAIPDALTILRDCRALRFEGFHFHTVSNNRDAAA 201 Query: 175 FSAML----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 +A+ + ++LGGG D + ++ + Sbjct: 202 HAALCTAELAMARGLAAEHGLDLRIVNLGGGWGVDYADPDWRFDVIGFARALTPHAKGLR 261 Query: 231 LE--PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---DYLLYQESATIYPNT 285 L+ G + ++D+ + + H + + Sbjct: 262 LQFECGRIVAAYHAAYVCEIIDLKQVHGRAFALLRGGTHHFRLPSSWSHNHPFEILPREE 321 Query: 286 GPYTAM----------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-F 334 + + G C D+ +IGD + + Y + + F Sbjct: 322 WSHPWPRPELLDTKLTLAGELCTPKDVLARDVPVPRARIGDLVCLQMAGAYGWDISHHDF 381 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN 360 P + + Sbjct: 382 LCHARPERIFLSSS-------RETTE 400 >gi|167905336|ref|ZP_02492541.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei NCTC 13177] Length = 419 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 107/356 (30%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ L+N+ + +L A+K + L + + G + S Sbjct: 50 PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ F E +Y + A+L+ + N + ++ ++IG Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169 Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 +R+NPSV + ++ G + V L H C Sbjct: 170 IRVNPSVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229 Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F L LG TD+ ++ + + Sbjct: 230 DAQLESFERVLDALDAFAAHVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + + +EPG+ I + L V + + + + + + Sbjct: 290 PLALAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++G PV+ GD I+ + GY + + Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405 >gi|167578905|ref|ZP_02371779.1| diaminopimelate decarboxylase, putative [Burkholderia thailandensis TXDOH] Length = 420 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 41/357 (11%), Positives = 99/357 (27%), Gaps = 25/357 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ ++N+ + ++ A+K + L + + G + S Sbjct: 51 PVFLYDPQRAVDNVARLQRALGDLQRGDFRVYYAMKANRFRPLLSELRRSPIFGIDACSP 110 Query: 61 YEVMLGHE-KFGGETHAYNV--AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E +Y D + +T+S + ++ Sbjct: 111 EELREALACGFAPERISYTAHGMMPDEAALLAALPDVHVNCDTLSAIALLGSRSPGREIG 170 Query: 118 IGLRINPSVSYSKFILADPNRPF-SRLGEKCKD----KIESEIKNVNGLMFHNNCENKSF 172 I + + Y ++ G + + + H + Sbjct: 171 IRVNPGVGIGYGDSERLSYAGATVTKFGIYAEQFGAALELAARHGLTVTWLHCHAGCGYL 230 Query: 173 LCFSAMLKNIEKEFGHF--------ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 + + F + TD+ ++ + + Sbjct: 231 DAQLDSFERVLDALDAFVARAPALRGINLGGGLGLP-HRATDRPLDLERWRAAVHARFGG 289 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESAT 280 + I +EPG+ I + L V + + + + + Sbjct: 290 RPLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPC 349 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + + G A D++G+ PV+ GD ++ + GY + + Sbjct: 350 VRRPGPAQSVCLAGNINEALDVWGDDVSLPPVEPGDFVALLNAGGYASSMSSNHCLR 406 >gi|94502385|ref|ZP_01308844.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|94451057|gb|EAT14023.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] Length = 225 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 68/220 (30%), Gaps = 12/220 (5%) Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ 216 V G+ H + F + F ++++I G G K Sbjct: 2 KVEGIHMHTGSDIIDLEVFLQGADILLNVASSFN-ELKYIDFGSGFKVPYHKNDTKTDLD 60 Query: 217 RLKEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHV 269 L F +K +++I EPG+ +V+ + V I VDS + Sbjct: 61 MLGVFFKKKISRVCKNIKIVFEPGKFLVSESGYFIVKVNVIKHTTSTVFACVDSGFNHFI 120 Query: 270 PDYLLYQESATIY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 P+ + V G C + D F ++ GD + F + Y Sbjct: 121 RPMFYDSYHQIDNLSNPSGKLRSYTVVGYICES-DTFCVNIKINEIREGDILCFRNAGAY 179 Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366 + + +N P+ + + + R + D + Sbjct: 180 CFSMSSNYNSRYRPSEVIIYNNKSFLIRRRENMQDLLKKM 219 >gi|301772966|ref|XP_002921899.1| PREDICTED: arginine decarboxylase-like [Ailuropoda melanoleuca] Length = 460 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 113/358 (31%), Gaps = 33/358 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ +KC ++ G+ L + G + ++ E+ L Sbjct: 41 FFVADLGTVVR--KHFCFLKCLPRVRPFYTVKCNSSPGVLKVLAELGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 K + + + +++ K K+ L I Sbjct: 99 VQRIGVPASKIICANPCKQIAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L+ + + + V G+ FH ++ + + Sbjct: 159 DDSRSLTPLSFKFGATLKSCRHLLENAKRSHVEVVGVSFHVGSGCPDLHAYTQSIADARL 218 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F + + LGGG + + + F E V I G Sbjct: 219 VFEMGAELGHGMHILDLGGGFPGLEGAKVRFEEIASVINSALDLYFPEGCGVDILARLGR 278 Query: 236 AIVTNTTTLNTTVL-------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP- 287 VT+ TL +++ D + ++ H+ + + ++ ++ NT P Sbjct: 279 YYVTSAFTLAVSIIAKKEVLLDQPGREEENGSTPKTIVYHLGEGVYGIFNSVLFDNTCPT 338 Query: 288 -------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 Y++ + G D E + + +GD + FE++ Y + + Sbjct: 339 PILQKKSSAEQPLYSSSLWGPVADGCDCVAEGLWLPQLHVGDWLVFENMGAYTVGMAS 396 >gi|260911532|ref|ZP_05918118.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 472 str. F0295] gi|260634322|gb|EEX52426.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 472 str. F0295] Length = 201 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 13/200 (6%) Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238 +IE +F + ++WI+ GGG T KDY V+ L+ F E+Y Q+ LEPG A Sbjct: 1 MHIESKFSGWFPALKWINFGGGHLMTRKDYDVELLINTLRSFKERYPHLQVILEPGSAFA 60 Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN-----------TG 286 T L ++D+ E+ + + S H+PD L + Sbjct: 61 WQTGPLVAQIVDVVEDKGIQTAILNVSFTCHMPDCLEMPYQPAVRNARSLELEAAVNGAS 120 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + G SCL+GD G + F+ + IG+ + FED+ Y + N FNGI P++A+ Sbjct: 121 KNIYRLGGNSCLSGDFMGLWQFDHALTIGENVIFEDMIHYTTVKTNMFNGITHPSLAIVR 180 Query: 347 VDGTIKAIREFSYNDYYNNL 366 G ++ +R + Y DY + Sbjct: 181 TSGELEMLRTYGYEDYKARM 200 >gi|73974239|ref|XP_858736.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 10 [Canis familiaris] Length = 449 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 115/373 (30%), Gaps = 33/373 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ I +K +KC + + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + +++ K + K+ L I Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKIGVNTMTCDNEVELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G F + + +GGG + V L F E ++I EPG V Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQ-------------------- 276 ++ TL ++ ++ + + P ++ Y Sbjct: 278 SSAFTLAVNIIAKKVAFQKCHTNSYPKKTGSDEPAFMYYMNDGIYGSFASKLSEDLNTIP 337 Query: 277 --ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 A+ + +T+ + G SC D E + +GD + F+++ +++ + F Sbjct: 338 EVHKASCKKDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAF 397 Query: 335 NGINMPTIAVKNV 347 N P I Sbjct: 398 NDFQRPAIYYMMS 410 >gi|257413466|ref|ZP_05591663.1| diaminopimelate decarboxylase [Roseburia intestinalis L1-82] gi|257203425|gb|EEV01710.1| diaminopimelate decarboxylase [Roseburia intestinalis L1-82] Length = 278 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 34/256 (13%), Positives = 75/256 (29%), Gaps = 17/256 (6%) Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-GLMFHNNCENKSFLCFSAMLKNIEK 184 + G K + ++ V+ L + + + + + Sbjct: 6 MDNPGDAKYGFTHEQIIEGFKILKEKGAKHFGVHAFLASNTVTNEYYPKLARQLFELVVE 65 Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----------VQIYLEP 233 I++I+L GG+ + + + + ++ + IY E Sbjct: 66 LRDKTGCDIQFINLSGGVGVPYTPDQTPNDIRVIGQGVKEAFEEILVPAGLGNISIYTEM 125 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YT 289 G ++ L T + K + VD+ + + + Sbjct: 126 GRFMLAPYGCLVTKAIHEKHTYKEYIGVDACAVNLMRPAIYGAYHHITVMGKEDEPCDHK 185 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 V G C D F + +GD + D + + +NG + DG Sbjct: 186 YDVTGSLCENCDKFAIDRMLPKIDMGDLLVIHDAGAHGFSMGYNYNGKLRSAEVLLKEDG 245 Query: 350 TIKAIRE-FSYNDYYN 364 + + IR + +DY+ Sbjct: 246 STQLIRRAETPDDYFR 261 >gi|294676050|ref|YP_003576665.1| lysine/ornithine decarboxylase [Rhodobacter capsulatus SB 1003] gi|294474870|gb|ADE84258.1| lysine/ornithine decarboxylase [Rhodobacter capsulatus SB 1003] Length = 381 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 96/355 (27%), Gaps = 19/355 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSLYEV 63 P + L L + A+K + + + G +S +E+ Sbjct: 23 PVLVFSPTALQATARRFLKGFPGV---VTYAVKSNPDEMVIQNLVAAGVKGFDVASPFEI 79 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L G Y+ + E A ++ S+ K +K + + Sbjct: 80 DLIRRLAPGAALHYHNPVRGREEIAHAVRAGVKTWSVDSRSELDKLIEMVPAEKCEISVR 139 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-VNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + + + L FH + + A + Sbjct: 140 FKLPVQGAAYNFGAKFGATADLAAELLRRAADAGFIPSLTFHPGTQCTDPAAWEAYILVA 199 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK-------EFSEKYSVQIYLEPGE 235 + + +++GGG K P E + EPG Sbjct: 200 SEICATAGVRAHRLNVGGGFPNHRKMGPAPVLEDIFALIDRATTEAFGSDRPILVCEPGR 259 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------T 289 +V + T T V + ++ + + E ++ G Sbjct: 260 GLVGDAFTHITKVKALRDDTHVFLNDGVYGGLAELPLIGNIERIEVWSPEGFERGGDMVE 319 Query: 290 AMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 +V G +C + D G+ + GD + F + Y FNG I Sbjct: 320 RIVFGPTCDSVDRLPGDVALPAELSEGDYVVFHGMGAYCSATNTRFNGFGQMEIV 374 >gi|167826885|ref|ZP_02458356.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 9] gi|226194830|ref|ZP_03790422.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei Pakistan 9] gi|225933174|gb|EEH29169.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei Pakistan 9] Length = 419 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 105/356 (29%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ L+N+ + +L A+K + L + + G + S Sbjct: 50 PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ F E +Y + A+L+ + N + ++ ++IG Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169 Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 +R+NP V + ++ G + V L H C Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229 Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F L LG TD+ ++ + + Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + I +EPG+ I + L V + + + + + + Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++ PV+ GD I+ + GY + + Sbjct: 350 RRPGPAQSVCVAGNINEALDVWCNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405 >gi|167722329|ref|ZP_02405565.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei DM98] Length = 419 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 107/356 (30%), Gaps = 23/356 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 P +L D Q+ L+N+ ++ +L A+K + L + + G + S Sbjct: 50 PVFLYDPQRALDNVARLQRALGDLQHGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ F E +Y + A+L+ + N + ++ ++IG Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169 Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 +R+NP V + ++ G + V L H C Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229 Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 F L LG TD+ ++ + + Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281 + I +EPG+ I + L V + + + + + + Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + V G A D++G PV+ GD I+ + GY + + Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405 >gi|307253176|ref|ZP_07535054.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859361|gb|EFM91396.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 236 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 67/227 (29%), Gaps = 13/227 (5%) Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD 206 + G+ H + F + ++ ++ + LGGG+ Sbjct: 5 AKTLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPY 64 Query: 207 KDYPVKDFCQRLKEFSEKYSV----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIV 261 + K EK +I LEPG AI N L T V + +N IV Sbjct: 65 NGEEPPHPTEYAKALLEKLKGYADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIV 124 Query: 262 DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 D+ + + L + V G C D G+ ++ GD Sbjct: 125 DTGMNDMIRPALYEAYMQITEVDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDL 183 Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 I+ Y + +N + + D S+ D + Sbjct: 184 IAMRSAGAYGAAMSSTYNSRPQAVEIMVDGDQAYLIKARASFADLWR 230 >gi|297200175|ref|ZP_06917572.1| diaminopimelate decarboxylase [Streptomyces sviceus ATCC 29083] gi|197713374|gb|EDY57408.1| diaminopimelate decarboxylase [Streptomyces sviceus ATCC 29083] Length = 472 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 111/392 (28%), Gaps = 51/392 (13%) Query: 3 KTPYY-LIDKQKLLNNLDTALYIRKN-----AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56 TP L+D + + V A+K + L + G Sbjct: 31 DTPVVGLLDVTGIRESAAELRAAFDGVTAPGTPVLHAFAVKASPLVPVLRLLREEGIGAE 90 Query: 57 SSSLYEVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 +S E+ L + + A E+ L+ + + +L++ Sbjct: 91 VASPGELALARAAGLSPDRTVLDSPAKTPSELREALALGIAVNADNPQELDRIDGLMLPH 150 Query: 115 HK-------------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIES 153 +G+R+NP V S+ G +D + Sbjct: 151 SPKGMGGAPMAVSRSPLGIRVNPQVGGGSIGATSTATATSKFGVALRDEGAREWVVRAYL 210 Query: 154 EIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKD 208 + ++ L H + + + E+ QI+ I +GGG+ Sbjct: 211 DRPWLSRLHAHTGSQGIPLSLMTQGVAETYALAEEINRRIGRPQIDTIDIGGGLPVNFAS 270 Query: 209 YPVKDFCQRLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLD------ISENI 255 + + E G +++ T+ V + Sbjct: 271 DVTTPTYAEYARALREAVPGLFDGRYGLVTEFGRSLLAKHGTIVARVEYAKSAGGRPIAV 330 Query: 256 KNLVIVDSSVEAHVP---DYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKP 311 + + ++ +VP + A P +GP V G +C AGD+ E Sbjct: 331 THAGVQVATRTVYVPGSWPLRIAAYDAKGRPRSGPEVVQDVAGPACFAGDLLAEGRALPL 390 Query: 312 VKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + GD ++ D Y +N + P + Sbjct: 391 LDQGDYVAALDTGAYYFAHHYAYNSLARPGVY 422 >gi|239981809|ref|ZP_04704333.1| lysine/ornithine decarboxylase [Streptomyces albus J1074] gi|291453668|ref|ZP_06593058.1| lysine/ornithine decarboxylase [Streptomyces albus J1074] gi|291356617|gb|EFE83519.1| lysine/ornithine decarboxylase [Streptomyces albus J1074] Length = 472 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 93/352 (26%), Gaps = 34/352 (9%) Query: 25 RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFGGETHAY-NVAYK 82 V A+K + L + G +S E+ L E + A Sbjct: 73 APGTPVLHAFAVKATPLVPVLRLLAEAGLGAEVASPGELALATAAGIPPERIVLDSPAKT 132 Query: 83 DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRINPSVSYSKFILADPNRPF 140 EI L + + +L + +G+R+NP V P Sbjct: 133 PAEIREALRLGVALNADNPQELERLDAILDGATPSSPVGVRVNPQVGGGSIGALSTATPT 192 Query: 141 SRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI-- 190 S+ G +D + + L H+ + + L + Sbjct: 193 SKFGVALRDPGARDWVLGAYAARPWLTRLHAHSGSQGMPLELLAEGLGALYDLAEEINEA 252 Query: 191 ---TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-------SVQIYLEPGEAIVTN 240 QI+ + +GGG+ K + E G +++ Sbjct: 253 AGRKQIDTLDIGGGLPVNFHSDADDPSHAAYAALLRKTVPGLFDGRYGLVTEFGRSVLAK 312 Query: 241 TTTLNTTVLDIS---------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291 T+ V + V + + A P TG Sbjct: 313 HGTVLARVEYTKSAGERPIAVTHAGVQVATRTVYNPESWPLRIAAFDAEGRPRTGDTVVQ 372 Query: 292 -VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 V G +C AGD+ + GD + D Y +N + P + Sbjct: 373 DVAGPACFAGDLLATGQTMPRLHPGDWAAALDTGAYYFAHHYAYNSLPRPAV 424 >gi|126728979|ref|ZP_01744794.1| Putative Ornithine decarboxylase [Sagittula stellata E-37] gi|126710909|gb|EBA09960.1| Putative Ornithine decarboxylase [Sagittula stellata E-37] Length = 373 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 98/356 (27%), Gaps = 26/356 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P + D ++L + ++ A+K + + L++ +S E+ Sbjct: 23 PVFFYDPERLTRMARRFIDGFPG---EVTYAVKANPDPVVIEALSRAGLQAFDVASPEEM 79 Query: 64 MLGHEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + Y+ + A + + +S+L K D Sbjct: 80 ALVRDVDPKARLHYHNPVRSKAEVAAARAFGVVSWSVDRMSELEKLGDIEGAEIAVRLKL 139 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--NVNGLMFHNNCENKSFLCFSAML 179 + D F EK + + V + FH + + + A + Sbjct: 140 PVAG------AVYDFGTKFGAAPEKAVALLRAVKDRGGVPSITFHPGTQCRDAQAWVAYI 193 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEP 233 + + +++GGG D ++ + + EP Sbjct: 194 AASARIAAEAGVTLHRLNVGGGFPAHRNDPEPDLEVIFDAIRDAVRASFGDDAPALVCEP 253 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ---ESATIYPNTGPYTA 290 G A+V L V I + L + D Q A T Sbjct: 254 GRAMVAEAFELALQVKAICDGAVFLNDGIYGGLSEWRDLSPSQRLTAYAQDGTRRDGETV 313 Query: 291 --MVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 V G +C + D + + GD + F Y+ FNG I Sbjct: 314 ANTVFGPTCDSLDRLSDQVSLPEDLAEGDYLLFHACGAYSTALVTRFNGYGARKIV 369 >gi|281353345|gb|EFB28929.1| hypothetical protein PANDA_013260 [Ailuropoda melanoleuca] Length = 381 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 47/376 (12%), Positives = 94/376 (25%), Gaps = 40/376 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY--- 61 P+ + + L + V A+K ++ + L +S Sbjct: 5 PFMVANLGVLASRHQAFCRAL--PWVSPFYAVKRNSSIWVLRVLAILGTSFDCASQMSPE 62 Query: 62 ----------EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 E+ Y K + + S+ K Sbjct: 63 AAPECPPCQVELEQVLGLGVAPSRIIYANPCKPVSHIQYAACRGVQLMTFDSEEELTKVA 122 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 ++ L + S S F L+ + E + V G FH + Sbjct: 123 QHHPKARLVLWLWTQDSESTFPLSAKFGATLEVCEHLLQSARALGLAVVGASFHMGSNCQ 182 Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + F+ + + F + + +GGG + P + R+ Sbjct: 183 TARSFTQAFADCRRVFEMGRASRHDMSLLDIGGGFPGEEGFEPKFEEMARVINAVLAQDF 242 Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH---------VPDY 272 I EPG + T ++ ++ + + Sbjct: 243 PVGGGVEIIAEPGHFYAASVCTAAVNIIAKKAVLQPGGRPPQAGVHLNEGHYGIFRIFSR 302 Query: 273 LLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYN 327 + GP + + G +C A D + +GD + + Y Sbjct: 303 EPVPRMPIVVKVRGPQPPLFPCTLYGPTCDAFDKLFPGELPMPELDVGDWLVLPSMGAYT 362 Query: 328 INRKNWFNGINMPTIA 343 + FNG +P Sbjct: 363 TTVSSTFNGF-LPASV 377 >gi|254456075|ref|ZP_05069504.1| lysine/ornithine decarboxylase [Candidatus Pelagibacter sp. HTCC7211] gi|207083077|gb|EDZ60503.1| lysine/ornithine decarboxylase [Candidatus Pelagibacter sp. HTCC7211] Length = 394 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 108/352 (30%), Gaps = 23/352 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEV 63 P Y I K + + K+L A+K + + + D +S+ E+ Sbjct: 19 PVYCIRKNSIQSATKFFKNKFPG---KILYAVKTNPHPVVIKQIIESGVDQFDVASIEEI 75 Query: 64 MLGHEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + +Y I + F+ ++ K + K Sbjct: 76 KAIRKYSQTAKCSYMHTVKSRESIKEAYFKYEIKTFSLDTKDELIKIIESTNNAKDLELF 135 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCK---DKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 ++ D ++ F L + ++ K + GL FH + + ++ + Sbjct: 136 VRVAVSNEHAEIDLSKKFGALSSEAAGLLRLVKQYSKKI-GLSFHVGSQCMHPISYAKGI 194 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-------KYSVQIYLE 232 +I ++I++GGG D + E + + +I E Sbjct: 195 SDIGNIIKKTKIIPDYINVGGGFPTIYPDLIPQTMENYFNEIKKSLDNLKLENLPEIICE 254 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTG 286 PG A+V + + V + + D+ V + +E+ + Sbjct: 255 PGRALVAESGSTIIKVNLRKKQKLYINDGTYGTLFDAGTPNIVFPSKMIKENTNKIISKK 314 Query: 287 PYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 G +C + D G F +K D I + Y + + FNG Sbjct: 315 LTAFDFFGPTCDSMDYMKGPFLLPNNIKENDYIELGQLGAYGLTFRTQFNGY 366 >gi|254875409|ref|ZP_05248119.1| lysA1, diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] gi|254841408|gb|EET19844.1| lysA1, diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] Length = 294 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 89/272 (32%), Gaps = 25/272 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D + L + A ++ A+K + +Y G S Sbjct: 23 TPCYIYDLELLEDTFLNAKKSLYKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 82 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117 E+ E K + + K + + D FN+ S AQ+ +K+ Sbjct: 83 EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 142 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168 I LR+NP++ + + G D + N+ GL +H + Sbjct: 143 NICLRVNPNIDAQTHHYISIGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 202 Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 ++ F K I+ I+ GGG+ + R + Sbjct: 203 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262 Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD 250 EF E ++ E G ++V + L + VL Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLF 294 >gi|317476227|ref|ZP_07935478.1| pyridoxal-dependent decarboxylase [Bacteroides eggerthii 1_2_48FAA] gi|316907638|gb|EFV29341.1| pyridoxal-dependent decarboxylase [Bacteroides eggerthii 1_2_48FAA] Length = 146 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 52/146 (35%), Positives = 77/146 (52%), Gaps = 5/146 (3%) Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT 285 ++I LEPG A T L + V+DI EN + + S H+PD L + Sbjct: 1 MRIILEPGSAFTWQTGVLTSEVVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPVVRGAE 60 Query: 286 ----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 GPY + G SCL+GD G + F+ ++IG+RI FED+ Y + + N FNGI+ P Sbjct: 61 MGNDGPYVYRLGGNSCLSGDYMGMWSFDHELQIGERIIFEDMIHYTMVKTNMFNGIHHPA 120 Query: 342 IAVKNVDGTIKAIREFSYNDYYNNLS 367 IA+ +G ++FSY DY + +S Sbjct: 121 IAMWTKEGKADLFKQFSYEDYRDRMS 146 >gi|311895101|dbj|BAJ27509.1| putative diaminopimelate decarboxylase [Kitasatospora setae KM-6054] Length = 460 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 56/403 (13%), Positives = 96/403 (23%), Gaps = 62/403 (15%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D + L G + +LK + TL SS E Sbjct: 31 GTPLYLYDLDV-VAAAHADLVAALPEGAVIHYSLKANPHTEVAGTLAALGCRAEVSSTGE 89 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--- 116 + F Y+ K A + +V L ++ A Sbjct: 90 LDAALAAGFHPADVTYSGPAKTAAEIATALRAGVTRFSVESVRDLEVLEELADLADPAES 149 Query: 117 ---------------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESE 154 L + + ++ G + Sbjct: 150 AESAGPGDPAGPGGVIECLLRINADRPVPGMGLAMAGVSTKFGVDFARVLATPEAFRDRG 209 Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTD---- 206 + GL + + + G + LGGG Sbjct: 210 RVRITGLHLYMGTNLPTEDVLLGQFEAGLAMCGELAAALGRDFAELDLGGGFGTPYAGPG 269 Query: 207 KDYPVKDFCQRLKEFSEKYSVQIY-------LEPGEAIVTNTTTLNTTVLDISENIKNLV 259 + L++ + + E G +V + TL TTV+D+ E+ Sbjct: 270 ERPAYPGLRAGLEKLLDLHVPTWRTGGPAVSFESGRYLVGSCGTLVTTVVDVKESKGQRY 329 Query: 260 IVDSSVEAHV-----------------PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302 + S H+ + V G C D Sbjct: 330 ALVDSGIHHLGGLAGLRRLPPLRPGLLRLSGGGDPAVGREAGPDAGPVTVAGPLCTPLDQ 389 Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAV 344 +G P++ GD ++ + Y + F G P V Sbjct: 390 WGSSSDLPPLRAGDLLAVPNTGAYGLTASLVGFLGYPAPVEVV 432 >gi|329847273|ref|ZP_08262301.1| lysine/ornithine decarboxylase [Asticcacaulis biprosthecum C19] gi|328842336|gb|EGF91905.1| lysine/ornithine decarboxylase [Asticcacaulis biprosthecum C19] Length = 423 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 101/349 (28%), Gaps = 25/349 (7%) Query: 20 TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYN 78 A + ++N + A+K + + +TL +SL EV L A+ Sbjct: 31 AAHWFQQNFKGDVFYAVKANPSPWVLETLWAAGVRSFDVASLNEVELVRSTLPTARLAFM 90 Query: 79 VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADP 136 K A + ++ + + A + + L + + S L Sbjct: 91 HPVKSRVSIAQAYFDFGVRTFSLDTHEELRKILDATGGARDLNLIVRLATSGEGSNLPLT 150 Query: 137 NRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI 190 ++ G + D + +++ G+ FH + ++A + + Sbjct: 151 ----NKFGVQAHDAPSLLMAARQATQDLMGVSFHVGSQCMRPTAYAAAMAAASRALVRAG 206 Query: 191 TQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 + + +GGG + + E Q++ EPG A+V +T+ Sbjct: 207 VFADVVDVGGGFPSVYPGMVPPALSEYMDVINRAFDEMKVHEETQLWAEPGRALVAESTS 266 Query: 244 LNTTV----LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + T V D + + G +C + Sbjct: 267 VLTKVELRKGDALYLNDGSYGNLFDATHAKWPFPVRLHRQDEAETDTLKPFRFYGPTCDS 326 Query: 300 GDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 D G F V GD + + Y + FNG + Sbjct: 327 IDSMPGPFWLPDDVNEGDYVEIGMLGAYGVTMGTRFNGYGETDTVFLDD 375 >gi|71278023|ref|YP_271140.1| putative pyridoxal-dependent decarboxylase [Colwellia psychrerythraea 34H] gi|71143763|gb|AAZ24236.1| putative pyridoxal-dependent decarboxylase [Colwellia psychrerythraea 34H] Length = 415 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 54/383 (14%), Positives = 105/383 (27%), Gaps = 37/383 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y++ L +L +KL A+K + TL+ +S E+ Sbjct: 27 YFVYQLDALKAHLAALQQ---QDVIKLWFAVKANPLSKIIQTLDSEGFNFDVASSGELAQ 83 Query: 66 GHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA-------QKLH 115 K + + +T + +++QLN + + + Sbjct: 84 VLAQGIDPSRILNTGPAKSKKQLTAFIKQGVNTFVVESLNQLNWLNEAVLEQEQSLKSVE 143 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFH----NN 166 K L + + G + ++ GL Sbjct: 144 KPKVLLRVQLQWHEGEKNPLGGNSLTPFGLSVSEWQNIHVDSYPALDLCGLHIFQWGNML 203 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221 K F +S M+ + +E + LGGG+ + Sbjct: 204 SNEKMFSLWSQMITPLTDLASSIGMTLEVLDLGGGLGIDYLGEGQALSWSQVIEDLAIIK 263 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280 ++ +++LE G V V+D N +V + + + + Q Sbjct: 264 AKAGVKELWLELGRFAVAEYGYYVVPVVDRKMNYNQDQLVLAAGINHLLRPAITDQPFPV 323 Query: 281 IYPNTG-------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 G + G C + D G K +G+++ F Y Sbjct: 324 QILREGFVAEDDSMQAFDLHGPLCTSMDKLGHLQLPKDTAVGEQLVFGYCGAYGFTESMP 383 Query: 334 -FNGINMPTIAVKNVDGTIKAIR 355 F + V +GT+ IR Sbjct: 384 FFLCHELAAEYVY-QNGTLTQIR 405 >gi|78214012|ref|YP_382791.1| diaminopimelate decarboxylase [Synechococcus sp. CC9605] gi|78198471|gb|ABB36236.1| possible diaminopimelate decarboxylase [Synechococcus sp. CC9605] Length = 402 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 58/379 (15%), Positives = 111/379 (29%), Gaps = 41/379 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P+YLID + N++ V+L + K + + ++ G S E Sbjct: 20 PFYLIDFDGIENSIMRLKSAFDADFKKVRLAYSFKTNSLQAITTFMHSKSMGAEVVSGQE 79 Query: 63 VMLGHEK-FGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + F + E I ++V +L + K Sbjct: 80 LEWALSDNFEPNNIYFDGPVKSKKEHKRAAELNVNIQVDSVQELIDLLEITSDPSKLKVG 139 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLC 174 + N+ SR G + E+ +GL H+ + Sbjct: 140 ARLS--------MPYKNKINSRFGLTRSEFKEATTIMKRTGISFSGLHLHSGSNITNINQ 191 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIH------------FTDKDYPVKDFCQRLKEFS 222 + + + ++ WI GGG T + + K+ Sbjct: 192 YRESIMSCIDCITETWHELSWIDFGGGFPANTALANESEELPTPEAFSSCIKSIISKKNL 251 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + + +EPG +V + L V I + ++V ++ V + Sbjct: 252 SLNNKTVVIEPGRCLVEDNGLLLARVEQIKKREDRNIVVTNAGLNLVKSMHSWYHPVIFL 311 Query: 283 PNTGPY----TAMVCGRSCLAGDIFGEFHF--EKPVKIGDRISFEDVAGYNINRKNWFN- 335 V G +C D+ + ++IGD I+ GY++ FN Sbjct: 312 RQEIDEEQSTPYEVYGCNCFESDLIIDELEGPPSDLRIGDWIAIGSTGGYDM---QNFNA 368 Query: 336 -GINMPTIAVKNVDGTIKA 353 P+I + +G K Sbjct: 369 WTQPYPSIYGSSREGIKKL 387 >gi|241948045|ref|XP_002416745.1| ornithine decarboxylase, putative [Candida dubliniensis CD36] gi|223640083|emb|CAX44329.1| ornithine decarboxylase, putative [Candida dubliniensis CD36] Length = 494 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 61/405 (15%), Positives = 121/405 (29%), Gaps = 81/405 (20%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D +++N+++ ++ ++ A+KC + + + LN+ +S E+ L Sbjct: 83 FFVCDLGEIINSVNQWK--QQLPMIQPYYAVKCNSNFKVLTLLNELGINFDCASKNEIDL 140 Query: 66 GHE---KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + Y K +N + + + +K H KI +R+ Sbjct: 141 ILSLNIQQAHQKIIYANPCKTNSFIRHAANENVNLTTVDNIYELYKLAKFHPHCKILIRL 200 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAML 179 S ++ L K+ + + G+ FH K F + Sbjct: 201 ITDDS--TAQCQLSSKFGCELNIAIKEILPKAKELGLQIYGVAFHVGSGAKDFNSIYQAI 258 Query: 180 KNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE---- 232 KN F Q + + +GGG + Q +K KY Q +++ Sbjct: 259 KNSRILFNEMLSLGFQPKLLDIGGGF----ERETFLQSSQMVKFALSKYFPQEFIQSNEI 314 Query: 233 -----PGEAIVTNTTTLNTTVLD------------------------------ISENIKN 257 PG +V N TL T V+ + N Sbjct: 315 KFIAEPGRFMVANAFTLITHVIARRDLSTQTTAAAGAATVMGSNGNDIVPSAMLYINDGV 374 Query: 258 LVIVDSSVEAHVPDYLLYQESATIYPNTGP------------------------YTAMVC 293 ++ + H + + + + Sbjct: 375 YGNLNCILFDHQNPKVYVLTNQNQLFYKQEMMMKSLLIDTSANNNNNNNNKVDGFNFSIW 434 Query: 294 GRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 G +C D V++GD + FE+V Y FNG+ Sbjct: 435 GPTCDGLDCVSSLVKLSKNVQVGDWLFFENVGAYTSCASTKFNGL 479 >gi|255524069|ref|ZP_05391030.1| Diaminopimelate decarboxylase [Clostridium carboxidivorans P7] gi|255512206|gb|EET88485.1| Diaminopimelate decarboxylase [Clostridium carboxidivorans P7] Length = 146 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 6/142 (4%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYP 283 +EPG +I+ N T V + + + + D A Sbjct: 1 MIEPGRSIIANAGTTLYNVGGTKKTYGGKQYIFIDGGMADNPRTALYDAKYEAVVANKVN 60 Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + + G+ C +GDI + V+ GD ++ YN + + +N I P + Sbjct: 61 SENSEIYTIAGKCCESGDIIIKEIELPEVERGDIMAVLTTGAYNYSMSSNYNRIPKPAVV 120 Query: 344 VKNVDGTIKAIREFSYNDYYNN 365 A++ +Y D N Sbjct: 121 FVKEGEAKIAVKRETYEDIIRN 142 >gi|84370045|ref|NP_001033599.1| arginine decarboxylase [Bos taurus] gi|83638748|gb|AAI09525.1| Arginine decarboxylase [Bos taurus] Length = 502 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 113/353 (32%), Gaps = 33/353 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L + G + ++ E+ L Sbjct: 41 FFVADLGAVVR--KHFCFLKCLPRVRSFYAVKCNSSPGVLKVLAELGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H Y K + + + +++ K K+ L + Sbjct: 99 VQHIGVPASKIIYANPCKQIAHIKYAAKHGVRLLSFDNEMELAKVVKSHPSAKMVLCVAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + + V G+ FH + ++ + + Sbjct: 159 EDSHSLSRLSLKFGASLKSCRHLLENAKRDHVEVVGVSFHIGSDCPDPQAYAQSIADARV 218 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG + + + F E V I + G Sbjct: 219 VFEMGAELGHRMHILDLGGGFPGVEDAKVRFEEIASVINSALDLYFPEGCGVDILAKLGR 278 Query: 236 AIVTNTTTLNTTVL-------DISENIKNLVIVDSSVEAHVPD--------YLLYQESAT 280 VT+ TL +++ D + SV H+ + L Sbjct: 279 YYVTSAFTLAVSIIAKKEVLLDQPGREEETSSSPKSVVYHLGEGVYGVFNSVLFDSACPA 338 Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 P Y++ + G D E + + +GD + FE++ Y Sbjct: 339 PILQKKPSTEQPLYSSSLWGPVASGCDCVAEGLWLPQLHVGDWLVFENMGAYT 391 >gi|51596221|ref|YP_070412.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP 32953] gi|186895248|ref|YP_001872360.1| Orn/DAP/Arg decarboxylase 2 [Yersinia pseudotuberculosis PB1/+] gi|51589503|emb|CAH21127.1| possible diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP 32953] gi|186698274|gb|ACC88903.1| Orn/DAP/Arg decarboxylase 2 [Yersinia pseudotuberculosis PB1/+] Length = 388 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 61/365 (16%), Positives = 121/365 (33%), Gaps = 21/365 (5%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLAL--KCFAAWGMFDTLNQYMDGTTSSSLYEV 63 Y++D + + I ++ A K + + + SL+E+ Sbjct: 18 VYILDLDAMTQFVREFRGIWDKQFPHVIFAYSFKSNNIASVTQLMFREGFSAEVVSLHEL 77 Query: 64 MLGH-EKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + F G + D EI+ LSN I + ++++ + A + + + Sbjct: 78 KLAINDGFFGTNIFFDGPVKLDNEIEFALSNNVNIQCDNITEIERVLALAANTNAEPHIS 137 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + S Y L+ E + + NG+ H+ S L++ Sbjct: 138 LRLSSDYRGQGLSRFGMDKDEWNEAIA-LLTTHGILCNGIHVHSGSNLSSCQGIVDTLES 196 Query: 182 IEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSEKYSVQIYLE 232 + E G + +I +GGG + + Y VK Q + + + + LE Sbjct: 197 FQDEIGALKNHLRFIDIGGGYPASTCGSDTASILEQYSVKIALQLRRLGIDFHKTPLILE 256 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA-- 290 PG A+ + L T ++ VI + ++ + + P Sbjct: 257 PGRALTEDFGYLVTRIVFAKCRYSTNVITTAVPGTNIRSAQYHNHRKVLIIPERPVNCEH 316 Query: 291 ---MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 V G +C DI + + + D+I+ Y+I + + P I V + Sbjct: 317 SVADVYGSNCYENDIIAKNVPVPFDLSLDDKIAIFSCGAYDIMNSSDWI-RKRPPIIVIS 375 Query: 347 VDGTI 351 T Sbjct: 376 NGKTY 380 >gi|38494225|gb|AAH61550.1| Antizyme inhibitor 1 [Rattus norvegicus] gi|149066491|gb|EDM16364.1| antizyme inhibitor 1, isoform CRA_a [Rattus norvegicus] gi|149066492|gb|EDM16365.1| antizyme inhibitor 1, isoform CRA_a [Rattus norvegicus] Length = 448 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 112/371 (30%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC + + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYMVKCNSTPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVSPENIIYTSPCKQASQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + + L + Sbjct: 158 EDNIGGEDGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHISSACKEYQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 F G F + + +GGG T+ ++ F E +QI EPG V Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSGIQIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKLSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDLNTVPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ +++ + F+ Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELSVGDWLIFDNMGADSLHGPSAFSD 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 TQRPAIYFMMS 408 >gi|302534846|ref|ZP_07287188.1| diaminopimelate decarboxylase [Streptomyces sp. C] gi|302443741|gb|EFL15557.1| diaminopimelate decarboxylase [Streptomyces sp. C] Length = 448 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 95/353 (26%), Gaps = 34/353 (9%) Query: 24 IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY-NVAY 81 + V A+K + L+ G ++S E+ L E + A Sbjct: 56 VAPGTPVLHTFAVKAAPLVPVLRLLDACGLGCEAASPGELALARAAGIPAERTVLDSPAK 115 Query: 82 KDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADPNRP 139 E+ L+ + + +L + A +GLRINP Sbjct: 116 TAAELRGALALGIAVNADNHQELERLDALVAAAPTRSPVGLRINPQTGAGSIDALSTATA 175 Query: 140 FSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI- 190 S+ G +D + +E + L H+ + + ++ + Sbjct: 176 TSKFGFALRDPGARERLVRAFAERPWLTRLHTHSGSQGVPLELIAEGVRELHGLAEEINA 235 Query: 191 ----TQIEWISLGGGIHFTDKDYPVKDFCQRLKEF-------SEKYSVQIYLEPGEAIVT 239 +++ + +GGG+ S + E G +++ Sbjct: 236 AVGERRVDTLDIGGGLPVDFASDEHAPSYAAYVAALRAAVPALFDGSYGLVTEFGRSLLA 295 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLYQESATIY---------PNTGPYT 289 + V + + + + P Sbjct: 296 KHGLVLARVEYTKTTGGRRIALTHAGVQLATRTVYAPAAWPLRILAYDAQGTPRDGSPVP 355 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 V G +C AGD+ + GD I+ D Y +N + P + Sbjct: 356 QDVAGPACFAGDLLATARELPELFPGDVIAVPDTGAYAFTAHYGYNSLPRPAV 408 >gi|327285434|ref|XP_003227438.1| PREDICTED: arginine decarboxylase-like [Anolis carolinensis] Length = 463 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 114/364 (31%), Gaps = 39/364 (10%) Query: 5 PYYLID-KQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 P+++ D ++ + +L +K ALKC + G+ TL G + ++ E+ Sbjct: 38 PFFVADLEEVVKKHLRLLK---ALPRIKPFYALKCNRSKGVVQTLAGLGAGFSCANKTEM 94 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 L E K + ++ + +++ K ++ L + Sbjct: 95 ALVKSVGVPAERIICASPCKQLSLIKYAASQGVQLMTFDNEVELGKVARSHPSARMLLCL 154 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 S S L+ + + + V G+ FH F+ + + Sbjct: 155 ATDDSRSSTHLSIKFGATLKTCRHLLETAKEMKVEVVGISFHLGSSCPDPQIFTQSIADA 214 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDK------DYPVKDFCQRLKEFSEKYSVQIYLEP 233 F ++ + +GGG ++ + F E V+I E Sbjct: 215 RLVFEMGAEVGYKMHLLDIGGGFPAFEESRGRFEETSAVVNSALDLYFPEGCGVEIMAEL 274 Query: 234 GEAIVTNTTTLNTTV-------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 G V + TL + LD + S H+ D + + I+ N Sbjct: 275 GRYYVDSAFTLAVNIVAKKEVTLDQVSSEDEDPGGKKSFVYHLNDGVYGSFGSVIFNNAC 334 Query: 287 P--------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY----NI 328 P +++ G + D E + +GD + FE++ Y + Sbjct: 335 PIPILHQKPSPDQRLHSSSFWGPTGDGLDRLAEGVDLPELHVGDWLVFENMGAYAVPPSA 394 Query: 329 NRKN 332 + + Sbjct: 395 SLSS 398 >gi|332710210|ref|ZP_08430161.1| diaminopimelate decarboxylase [Lyngbya majuscula 3L] gi|332350989|gb|EGJ30578.1| diaminopimelate decarboxylase [Lyngbya majuscula 3L] Length = 407 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 119/362 (32%), Gaps = 18/362 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 I TP + D + + + +R+ +L LA+K + + + G +++ Sbjct: 43 IPTPALVYDLDAITDTVTALRNDLRQIQNSELCLAVKANRCQSVLRHMAKLGLGADITTI 102 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ ++ + ++ + + ++SQL + ++ K++GL Sbjct: 103 QELDAAMAAGLWPIYSTAPGFSVADLKRLATEGVIPDLCSLSQL-RVWCESVNRDKRVGL 161 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--KNVNGLMFHNNCENKSFLCFSAM 178 R+ R + + S I + + H + Sbjct: 162 RLRFPFHEDAKAKNAVTRWSRFGVDPTDSGLHSLIQTHELEVVHLHVHEGETFSEADLHQ 221 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI--------- 229 ++ ++E ++LGG + + K QR+ + K +I Sbjct: 222 TLDLLVSCLEIFPKVEVLNLGG--GWAYLFHLQKPEAQRVWDLVNKTITRINNQRQQPVR 279 Query: 230 -YLEPGEAIVTNTTTLNTTVL--DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 +EPG + L V D + +V++D+S + + + Sbjct: 280 LVIEPGMLLTMMAGYLVAEVKAADDHPSGNRIVVLDTSAWNLMFWAPRPAVAQIPFREGP 339 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + + G +C D F +++GDR+ Y + +G+ +P V Sbjct: 340 MFVHDLAGCTCYETDYFCLNEKMARIEVGDRVILNASGAYTSSVARSLHGLPIPKEFVIR 399 Query: 347 VD 348 + Sbjct: 400 DN 401 >gi|85706322|ref|ZP_01037416.1| Putative Ornithine decarboxylase [Roseovarius sp. 217] gi|85669095|gb|EAQ23962.1| Putative Ornithine decarboxylase [Roseovarius sp. 217] Length = 376 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 44/364 (12%), Positives = 94/364 (25%), Gaps = 24/364 (6%) Query: 1 MIKTP----YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGT 55 M +TP Y +L + A+K + + + + Sbjct: 15 MRQTPDAALLY-FSPDQLQATARAFQSGFPG---LVTYAVKANPGAEVLANLVAAGITAF 70 Query: 56 TSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 +S E+ + YN + V S + ++ L + ++ Sbjct: 71 DVASPEEMRAVRDVCPDAVLHYNNPVRSIPEIEVASQMGVRSY-SIDCLRELDKLTGRIA 129 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-FHNNCENKSFLC 174 + + ++ + + M FH + Sbjct: 130 PDAEITVRLALPVRGAAYDFGAKFGVGPERAADLLRVVAERGFTPSMTFHPGTQCADPAA 189 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQ 228 + A + + + ++ +++GGG + + Sbjct: 190 WGAYISVVAEVAHAAGVRLARLNVGGGFASHRTGTTPDLTAVFDHIGAEVARVFGPNAPA 249 Query: 229 IYLEPGEAIVTNTTTLNTTV------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + EPG A+V ++ V I N + + PD L Sbjct: 250 LVCEPGRAMVAEAFSMAVRVKALRDSGAIFVNDGVYGGLTEIRDIGAPDRLTVLAPDGTP 309 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 P +V G +C + D + + GD + + Y FNG + Sbjct: 310 RTGAPLPRVVFGPTCDSIDRLPDPLPLPSDLAEGDYLLIAGMGAYTRCLSTDFNGYGLRE 369 Query: 342 IAVK 345 I Sbjct: 370 IVTV 373 >gi|281340152|gb|EFB15736.1| hypothetical protein PANDA_011627 [Ailuropoda melanoleuca] Length = 460 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 58/383 (15%), Positives = 109/383 (28%), Gaps = 43/383 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ I +K +KC + + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKIGVNIMTCDNEVELKKISRNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G F + + +GGG + V L F E V+I EPG V Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGVKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ---------------------- 276 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFSSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 277 ------------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + +T+ + G SC D E + +GD + F+++ Sbjct: 338 VHKASCITNNRTAYLKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMG 397 Query: 325 GYNINRKNWFNGINMPTIAVKNV 347 +++ + FN P I Sbjct: 398 ADSLHEPSAFNDFQRPAIYYMMS 420 >gi|94498726|ref|ZP_01305276.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas sp. SKA58] gi|94421825|gb|EAT06876.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas sp. SKA58] Length = 355 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 97/352 (27%), Gaps = 34/352 (9%) Query: 28 AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYN-VAYKDCE 85 AG+ L A+K + + +DG +S E+ + E + ++ + E Sbjct: 3 AGIDLHYAIKANPFAPLLSRMAVQVDGFDIASGGELGMALEAGMAPDRISFAGPGKRTDE 62 Query: 86 IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGE 145 + A + TI + + + + + K+ L I + + ++ Sbjct: 63 LTAAIFAGVTINLESEGEARRAIAAGEAIGKQPRLAIRVNPDFDLKGSGMRMGGGAKPFG 122 Query: 146 KCKDKIESEIKNV-------NGLMFHNNCENKS----FLCFSAMLKNIEKEFGHFITQIE 194 D+ + + + G +N +A + + Sbjct: 123 VDADRAAALARWIIDAGANWRGWHIFAGSQNLDAQAIIDTQAATIALAARLSQEVGATPP 182 Query: 195 WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV---------QIYLEPGEAIVTNTTTLN 245 ++LGGG + + + + LE G +V Sbjct: 183 LVNLGGGFGLAYFPGDTPLDIRPVGVALGRALESRPPILAGSRFALELGRWLVGEAGVYL 242 Query: 246 TTVLDISENIKNLVIVDSSVEAH-----------VPDYLLYQESATIYPNTGPYTAMVCG 294 T V+D+ ++ +V H + ++ + G Sbjct: 243 TRVVDVKDSQGERFVVVDGGLHHQLAASGNFGTVIRRNYPIALASRFDAAPALDPVTIVG 302 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVK 345 C D GE + GD I+ Y + F G + Sbjct: 303 CLCTPIDRLGEKVALPQISEGDLIAIFLAGAYGASASPMAFLGHPPARELLL 354 >gi|302560274|ref|ZP_07312616.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces griseoflavus Tu4000] gi|302477892|gb|EFL40985.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces griseoflavus Tu4000] Length = 470 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 53/400 (13%), Positives = 111/400 (27%), Gaps = 44/400 (11%) Query: 8 LIDKQKLLNNLDTALYIRK-----NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 L+D + + + V A+K + L + G +S E Sbjct: 54 LLDVTGIRESAAELKAAFEAVAAPGTPVLHAFAVKASPLVPVLRLLREEGIGAEVASPGE 113 Query: 63 VMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118 + L E + A E+ L+ ++ ++ +L++ + Sbjct: 114 LALARAAGVEPERTVLDSPAKTPAELREALALGIAVMVDSPQELDRLDALMAGSASRSPV 173 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE-- 168 G+R+NP V S+ G +D + + + L H + Sbjct: 174 GIRVNPQVGGGSIEALSTATATSKFGVALRDEGAREWVVRAYLDRPWLTRLHAHTGSQGI 233 Query: 169 --NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDY----PVKDFCQRLK-- 219 + + + E+ Q++ I +GGG+ + + L Sbjct: 234 ALSMMARGITETYELAEEINRRAGRRQVDTIDIGGGLPVNFASEESTPTYTRYARLLSEA 293 Query: 220 -EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS---------ENIKNLVIVDSSVEAHV 269 + E G +++ T+ V + V + Sbjct: 294 VPGLFDGRYGLVTEFGRSLLAKHGTVVARVEYAKSAGGRPVAVTHAGVQVATRTVYAPAS 353 Query: 270 PDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + A P GP V G +C AGD+ + ++ GD + D Y Sbjct: 354 WPLRIAAYDAKGRPKEGPPVVQDVAGPACFAGDLLAQAQSLPLLEQGDHAAALDTGAYYF 413 Query: 329 NRKNWFNGINMPTIA-VKNVDGTIK----AIREFSYNDYY 363 +N + P + + + + Sbjct: 414 AHHYAYNSLPRPGVYGFVPGGESGIAFATVRTPQTVEEIV 453 >gi|159114038|ref|XP_001707244.1| Ornithine decarboxylase [Giardia lamblia ATCC 50803] gi|157435348|gb|EDO79570.1| Ornithine decarboxylase [Giardia lamblia ATCC 50803] Length = 448 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 52/406 (12%), Positives = 100/406 (24%), Gaps = 71/406 (17%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 +++ ++ + + V++ A+KC + +L+ G +S EV Sbjct: 41 VLNVSEIERHYNIWKTHLPE--VQVRYAVKCNMHPLLLRSLHLLGAGFDCASPAEVRAAL 98 Query: 68 -EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126 Y K + F S+ K+G + + Sbjct: 99 SAGCPPSKIIYANPQKPKRSIEEAFRLNCNTFTFDSEHELLSMLESTPPGKVGRFVLRLL 158 Query: 127 SYSKFILADPNR-PFSRLGEKCKDKIESEIK---NVNGLMFHNNCENKSFLCFS---AML 179 + F +C I N+ G FH S F + Sbjct: 159 PPDESSSICRFGVKFGASPSECYRLIRLCKHLGANLVGFSFHVGSGCGSVDSFRLAVQYM 218 Query: 180 KNIEKEFGHFITQIEWISLGGGI-----HFTDKDYPVKDF----------------CQRL 218 K + +++GGG + R+ Sbjct: 219 GEAAKFAKEQGFTLTVLNIGGGYMSKGAERHYDEPNRHAHITPPSFEEIASALREEINRI 278 Query: 219 KEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS------------- 263 K + S I EPG + TL T + + Sbjct: 279 KVYFTNKSEDLEIMAEPGRFFAGDIMTLGTRIYGRRIIFDKIEDNSCLTEKEIMESGKAS 338 Query: 264 --------------SVEAHVPDYLLYQESATIYPNTGPY-----------TAMVCGRSCL 298 A + D+++ T T+ + G +C Sbjct: 339 INEVKYYVGDGVYGYYNAILFDHVVPHLRFTDKHGNRKELSGAHAGSSLNTSSIFGPTCD 398 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + D + + +GD + + Y FNGI ++ Sbjct: 399 SLDCILKERKLPLLDVGDWVITDAFGAYTYAAATEFNGIPHVSVVC 444 >gi|150399162|ref|YP_001322929.1| Orn/DAP/Arg decarboxylase 2 [Methanococcus vannielii SB] gi|150011865|gb|ABR54317.1| Orn/DAP/Arg decarboxylase 2 [Methanococcus vannielii SB] Length = 409 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 61/391 (15%), Positives = 121/391 (30%), Gaps = 37/391 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +YL+D K + N D L + + + K + +N+ S E Sbjct: 19 FYLLDSNKFVKNYDEFLGEFQKIYPNTVIAYSYKTNYLPHLCSIVNKKGGFAEVVSKMEY 78 Query: 64 MLGHEK--FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + ++ L + ++ +L+ ++ A KI Sbjct: 79 DLAIKIGVIPSNIIVNGPLKTKEHLEYFLLKGSIVNVDSYRELDLIREIANSNPGKILSV 138 Query: 122 --INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN-----CENKSFLC 174 S + + EK K+ + + + G+ H +K Sbjct: 139 GIRCNFEMGSTVSRFGFDVRDAEFIEKFKELKKIDNLYIKGIHCHFPDRNLDSYSKRVDN 198 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-------------QRLKEF 221 +L + KE I G F K + + K Sbjct: 199 LINILDLLFKENIPEFVDIGGGYFGKVNDFLAKQFNCNVPSYSDYASIIASRFKEYFKNI 258 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV--------PDYL 273 E ++ LEPG A+V +T +++I + + + + ++ Sbjct: 259 PENRKPKLILEPGTALVADTMKFIAKIVEIKNIRGKKIAMTTGSKFNMGLFGLSINLPIN 318 Query: 274 LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 +Y E + G +C+ D + + + IGD I+F++V Y+ K Sbjct: 319 VYSEFKNGKFINN---VDISGYTCIEADYLFKNY-CGILNIGDYIAFDNVGSYSFVFKPP 374 Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 F N+P I N D + ++ D + Sbjct: 375 FICPNVP-IIDYNGDKFKIVKHKETFEDIFK 404 >gi|284043639|ref|YP_003393979.1| diaminopimelate decarboxylase [Conexibacter woesei DSM 14684] gi|283947860|gb|ADB50604.1| Diaminopimelate decarboxylase [Conexibacter woesei DSM 14684] Length = 475 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 53/426 (12%), Positives = 110/426 (25%), Gaps = 65/426 (15%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P +++ + L A + +L A+K + L Q G Sbjct: 39 GSPLFVVSEPALRARARRVQAAFAAAWPEGPVVVLPAVKASTVVALHRVLAQEGCGADLY 98 Query: 59 SLYEVMLG-HEKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E+ + + A I+ ++ I + V ++ +D A+ L + Sbjct: 99 GGAELEIAVRAGTDPDRISVNGTAKDRPTIERAIALGARITIDDVHEVEIARDAARALGR 158 Query: 117 KIGLRINPSV-------------------------SYSKFILADPNRPFSRLGEKCKDKI 151 LR+ + D Sbjct: 159 PARLRVRLRPEILLDAPSDGNAMIAATDGSVLRIKDAYGRYKPGVPFDDMARIGRSLDAP 218 Query: 152 ESEIKNVNGLMFHNNCE-------------------NKSFLCFSAMLKNIEKEFGHFITQ 192 E E+ V + F + ++ + ++ ++ F Sbjct: 219 EIEMIGV-HMHFPRHTTDLGVIGHVADRYAALIAELSELWDGWTPRQIDVGGGFAPPGDP 277 Query: 193 IEWISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246 + + + Q+ +EPG ++ Sbjct: 278 FGRRNPSFAHRTPPPIEAYASTIAEHLRTGLARHGIDTAGRQLEVEPGRSLFGPVGVHLA 337 Query: 247 TVLDISEN--IKNLVIVDSSVEAHVPD-----YLLYQESATIYPNTGPYTAMVCGRSCLA 299 TVL++ V++ H + + + G TA V GRSC+ Sbjct: 338 TVLNVKRQTRPFPHAWVETDTTQHFLPGVGQEWDDFPVAFDRVAGDGELTADVVGRSCM- 396 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 GD+ GD ++F Y + FN + P + + R + Sbjct: 397 GDVLASDAPVPAPVRGDVLAFASTGAYQETSASNFNALPRPATVLVDSGQAHLVRRAETV 456 Query: 360 NDYYNN 365 +D Sbjct: 457 DDVLGR 462 >gi|239624545|ref|ZP_04667576.1| diaminopimelate decarboxylase [Clostridiales bacterium 1_7_47_FAA] gi|239520931|gb|EEQ60797.1| diaminopimelate decarboxylase [Clostridiales bacterium 1_7_47FAA] Length = 430 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 60/402 (14%), Positives = 112/402 (27%), Gaps = 58/402 (14%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ D + I +K++ A+K + T Q DG S E Sbjct: 13 GTPAYVFDLDAFALRIRHMKEILGQ-DIKIIYAMKANPFFT--RTAAQEADGLEVCSPGE 69 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEID--------------------AVLSNCDTIIFNTV 101 + E + K+ A DT ++ Sbjct: 70 YAICQRAGVPPEKIVLSGVNKEAAHIREVVGGVGSCGAAVGNPGPAAGSPGPDTYTAESL 129 Query: 102 SQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-NVNG 160 SQL + A + + S ++F + + + G Sbjct: 130 SQLALLESCAAQAQGSPLRVLLRLTSGNQF------GMDEETILSVIQRRNAYPHLHFTG 183 Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDK------DYP 210 L +++ + K L+ ++ +I + G G H D Sbjct: 184 LQYYSGTQKKQSGKIHKELERLDALLARIRDELQHEIRELEYGPGFHIPYFEGESPVDED 243 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV- 269 R + + I LE G + + T V+D +N + HV Sbjct: 244 AMLANFRAALDAMAFKGSISLEAGRFLAAPCGSYVTRVVDTKQNQGQDYCIVDGGINHVN 303 Query: 270 ---------------PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKI 314 + Q + VCG C +GD+ + ++ Sbjct: 304 YYGQAMAMKIPAIRHLPQSISQGMPADHIPGENTQWTVCGSLCTSGDMLVKNLPLSGLRT 363 Query: 315 GDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAIR 355 GD + F+ + Y + F +P + + +K +R Sbjct: 364 GDMLVFDRIGAYAVTEGIYLFLSRGLPAVLTYERETGLKLVR 405 >gi|62259046|gb|AAX77838.1| unknown protein [synthetic construct] Length = 329 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 92/280 (32%), Gaps = 25/280 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP Y+ D + L + A ++ A+K + +Y G S Sbjct: 49 TPCYIYDLELLEDTFLNAKKSLYKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 108 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117 E+ E K + + K + + D FN+ S AQ+ +K+ Sbjct: 109 EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 168 Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168 I LR+NP++ + + G D + N+ GL +H + Sbjct: 169 NICLRVNPNIDAQTHHYISIGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 228 Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219 ++ F K I+ I+ GGG+ + R + Sbjct: 229 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 288 Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 EF E ++ E G ++V + L + VL ++ + Sbjct: 289 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFYPYDVPDY 328 >gi|308161400|gb|EFO63849.1| Ornithine decarboxylase [Giardia lamblia P15] Length = 448 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 104/406 (25%), Gaps = 71/406 (17%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 +++ ++ + + V++ A+KC + +L+ G +S EV Sbjct: 41 VLNVSEIEKHYNIWKTHLPE--VQVRYAVKCNMHPLLLRSLHLLGAGFDCASPAEVRAAL 98 Query: 68 -EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126 Y K + F S+ K+G + + Sbjct: 99 SAGCPPSKIIYANPQKPKRSIEEAFRLNCNTFTFDSEHELLSMLESTPSGKVGRFVLRLL 158 Query: 127 SYSKFILADPNR-PFSRLGEKCKDKIESEIK---NVNGLMFHNNCENKSFLCFS---AML 179 + F +C I N+ G FH S F + Sbjct: 159 PPDESSSICRFGVKFGASPSECYRLIRLCKHLGANLVGFSFHVGSGCGSVDSFRLAVRYM 218 Query: 180 KNIEKEFGHFITQIEWISLGGGI--------------HFTDKDYPVKDFCQRLKEFSEKY 225 K + +++GGG H ++ L+E +K Sbjct: 219 GEAAKFAKEQGFTLTVLNIGGGYMSKGAERHYDEPNKHAHITPPSFEEIAAALREEIDKI 278 Query: 226 SV---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS------------- 263 + +I EPG + TL T + + Sbjct: 279 KIYFTNKSEDLEIMAEPGRFFAGDIMTLGTRIYGRRIIFDKIEDNSCLTEKEIMESGKAS 338 Query: 264 --------------SVEAHVPDYLLYQESATIYPNTGPY-----------TAMVCGRSCL 298 A + D+++ T T+ + G +C Sbjct: 339 INEVKYYVGDGVYGYYNAILFDHVVPHLRFTDKHGNCKELSEAHIGSSLNTSSIFGPTCD 398 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + D + + +GD + + Y FNGI ++ Sbjct: 399 SLDCILKERKLPLLDVGDWVITDAFGAYTYAAATEFNGIPHVSVVC 444 >gi|307180320|gb|EFN68353.1| Ornithine decarboxylase [Camponotus floridanus] Length = 414 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/371 (13%), Positives = 100/371 (26%), Gaps = 80/371 (21%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y++D ++ K V+ A+KC + EV+ Sbjct: 36 FYVLDIGDIVQKHQIWKE--KLPRVEPYYAVKCNDNLMVI----------------EVLA 77 Query: 66 GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125 I+ + + A+ +G++ Sbjct: 78 AL-------------------GVGFDCASKIVI-------RIRCDAETAQCPLGMKFGCD 111 Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185 + NV G FH + + + + + Sbjct: 112 PIHE--------------APSLLRLAYMLGLNVVGFSFHVGSGCQDPPIYHCAIHHCKIL 157 Query: 186 FGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEAIV 238 F + + LGGG DK + + + + ++Y + EPG V Sbjct: 158 FDMATNLGFKPYLLDLGGGYP-GDKGTSIDKMAEIINKALDEYFNTDAVHVIAEPGRFYV 216 Query: 239 TNTTTLNTTVLD--------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + TL T + V S + D+ Sbjct: 217 ASAFTLATNIHSKRSVRGDENSSTTVTHNMYYINDGVYGSFNCLLYDHQHVTPIPLKNGC 276 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + + G +C D + +++GD I FE++ Y + + FNG +P + V Sbjct: 277 GKMIPSSIWGPTCDGLDKVVDNIMLHDMELGDWIIFENMGAYTLPVASPFNGFPIPKVHV 336 Query: 345 KNVDGTIKAIR 355 + ++ Sbjct: 337 VADEDIWLLLK 347 >gi|320164368|gb|EFW41267.1| diaminopimelate decarboxylase [Capsaspora owczarzaki ATCC 30864] Length = 459 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 57/377 (15%), Positives = 111/377 (29%), Gaps = 42/377 (11%) Query: 9 IDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +D + +D+ LA+K + + Q G ++SL E++ Sbjct: 38 LDLDHVRGAIDSVRAAFDADSTTDFCHCLAIKSNPTLRVLQYVVQQGMGLEAASLGELVQ 97 Query: 66 G-HEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-----HKKI 118 E + + EI L TI + + +L++ A ++ Sbjct: 98 AIRAGAPAENIVFDSPVKTTEEIRFALKQGVTINLDNMPELDRVAAIAAASGDAASRYRV 157 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCE---- 168 GLRINP + S+ G D + +N + H + Sbjct: 158 GLRINPQGASGSLEAFSTGTMTSKFGIGLVDARQEIIAAYKRYSWLNAIHIHVGSQGIPM 217 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225 + ML ++ Q I I +GGG+ + L E ++ Sbjct: 218 DLMASGVRRMLDLVKDIHAAVGKQQITLIDIGGGMSVNFSSEEITPTFAELSETLQQAAP 277 Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLYQESA 279 +++ E G +IV + + + + + + + Sbjct: 278 ELFSGEYRVFTEFGRSIVAKAGFYASRLEYVKTTGGRQIALQHIGADMAIRTIYHPDKWP 337 Query: 280 -------------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + + + G C AGDI + G+ I DV GY Sbjct: 338 LRVTLLTSEGALRPVESSEALVETDIAGPCCFAGDIIAHRRPFPQLHSGEYILVHDVGGY 397 Query: 327 NINRKNWFNGINMPTIA 343 + + +N P + Sbjct: 398 YHSSYSKYNLRQAPAVY 414 >gi|315497323|ref|YP_004086127.1| orn/dap/arg decarboxylase 2 [Asticcacaulis excentricus CB 48] gi|315415335|gb|ADU11976.1| Orn/DAP/Arg decarboxylase 2 [Asticcacaulis excentricus CB 48] Length = 422 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 95/348 (27%), Gaps = 22/348 (6%) Query: 20 TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEVMLGHEKFGGETHAYN 78 A + +++ + A+K + + +TL +S+ EV L A+ Sbjct: 31 AAQWFQRHFNGDVFYAVKANPSSWVIETLLDGGISSFDVASINEVKLVRGLAPEARLAFM 90 Query: 79 VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------AQKLHKKIGLRINPSVSYSKFI 132 K A + + ++ + + A+ L+ + L + S Sbjct: 91 HPVKSRRAIAEAYSDFGVKTFSLDTHEELQKILDATGGAKDLNLIVRLATSGEGSNLPLT 150 Query: 133 LADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ 192 +P+ ++ G+ FH + ++A + + Sbjct: 151 NKFGAQPYEAPALLL--AARQATQDRMGVSFHVGSQCMRPTAYAAAMSAASRALVRAGVL 208 Query: 193 IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252 + + +GGG + + + E E +L I Sbjct: 209 ADIVDVGGGFPSVYPGMVPPSLPEYMDVIHRAFDEMKVHEATELWAEPGRSLVAESTSIL 268 Query: 253 ENIKNLVIVDSSVEA----HVPDYLLYQESATIYPNTGP--------YTAMVCGRSCLAG 300 ++ + ++ D + + + G +C + Sbjct: 269 ARVELRKGDALYLNDGAYGNLFDATHAKWPFPVRLHRAEDGDEQPELKPFRFYGPTCDSI 328 Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 D G F V+ GD + + Y + FNG + Sbjct: 329 DHMPGPFWLPADVEEGDYVEIGMLGAYGVAMTTEFNGYGQTETVFLDD 376 >gi|296490168|gb|DAA32281.1| arginine decarboxylase [Bos taurus] Length = 412 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 113/353 (32%), Gaps = 33/353 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L + G + ++ E+ L Sbjct: 41 FFVADLGAVVR--KHFCFLKCLPRVRSFYAVKCNSSPGVLKVLAELGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H Y K + + + +++ K K+ L + Sbjct: 99 VQHIGVPASKIIYANPCKQIAHIKYAAKHGVRLLSFDNEMELAKVVKSHPSAKMVLCVAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + + V G+ FH + ++ + + Sbjct: 159 EDSHSLSRLSLKFGASLKSCRHLLENAKRDHVEVVGVSFHIGSDCPDPQAYAQSIADARV 218 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG + + + F E V I + G Sbjct: 219 VFEMGAELGHRMHILDLGGGFPGVEDAKVRFEEIASVINSALDLYFPEGCGVDILAKLGR 278 Query: 236 AIVTNTTTLNTTVL-------DISENIKNLVIVDSSVEAHVPD--------YLLYQESAT 280 VT+ TL +++ D + SV H+ + L Sbjct: 279 YYVTSAFTLAVSIIAKKEVLLDQPGREEETSSSPKSVVYHLGEGVYGVFNSVLFDSACPA 338 Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 P Y++ + G D E + + +GD + FE++ Y Sbjct: 339 PILQKKPSTEQPLYSSSLWGPVASGCDCVAEGLWLPQLHVGDWLVFENMGAYT 391 >gi|238925013|ref|YP_002938529.1| putative diaminopimelate decarboxylase [Eubacterium rectale ATCC 33656] gi|238876688|gb|ACR76395.1| probable diaminopimelate decarboxylase [Eubacterium rectale ATCC 33656] Length = 429 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 47/418 (11%), Positives = 112/418 (26%), Gaps = 69/418 (16%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTS 57 M +TPYY+ D + G + L ++K + L + +D Sbjct: 1 MRQTPYYVFDTDEFAKRAAMIRAALDCKGGRRIPLCFSIKANPF--LLHRLPEGLDHVEV 58 Query: 58 SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL 114 S E+ + E+ Y+ K+ + ++ + + Sbjct: 59 CSPGELEICIALGVKPESIIYSGVMKEKCDIERAVSYGAGILTCESIRHAALISEVMIEC 118 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC 167 ++ + +K + ++ G +D V G+ +++ Sbjct: 119 IQEGAHE--AEFAETKAQVILRLTSGNQFGMSLEDIEYIISHPDEFKGITVIGIHYYSGT 176 Query: 168 E---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQ 216 + K + + + + + + G G+ + ++ + Sbjct: 177 QKSLRKINKDLEKIKSALTGLKEKYGFEPQLVEYGPGLCVEYFEDDWQEKEKQSLDEAAE 236 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-----PD 271 L+EF+E+Y + +E G + + T V DI + H+ Sbjct: 237 VLREFAEEYPLG--IEMGRFLAASCGKYYTQVKDIKSTGDANYAILDGGIHHLNYFGQRM 294 Query: 272 YLLYQESATIYPNTGP---------------------------------YTAMVCGRSCL 298 + +CG C Sbjct: 295 AMQVPPIKVFDGIEWELEKSSDVCRVLGMVGYECMNDIINKNMQKANDCEDYTLCGSLCT 354 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIR 355 D+ ++I + I F Y++ F +P + + + +R Sbjct: 355 VADVMVREVVLPRLEIDNIIEFGHCGAYSVTEAPVLFLSRKLPAVYAYSKQKGFELLR 412 >gi|187466288|emb|CAQ51904.1| arginine decarboxylase [Mus musculus] Length = 459 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 114/352 (32%), Gaps = 32/352 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+ C ++ G+ L + G + ++ E+ L Sbjct: 41 FFVADLGAVVR--KHFCFLKHLPRVRPFYAVGCNSSLGVLKVLAELGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H K + + + +++ K K+ L I Sbjct: 99 VQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 159 QDSHSLNHLSLRFGASLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218 Query: 185 EF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 F + + LGGG + ++ F E V I E G Sbjct: 219 VFQMGEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEGCGVDILAELGR 278 Query: 236 AIVTNTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 VT+ T+ VLD + + S+ H+ + + ++ ++ NT P Sbjct: 279 YYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYHLDEGVYGVFNSVLFDNTCPTP 338 Query: 290 A--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 A + G + D E + +++GD + F+++ Y Sbjct: 339 ALQKKPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 390 >gi|118793145|ref|XP_320707.3| AGAP011808-PA [Anopheles gambiae str. PEST] gi|116117238|gb|EAA00694.3| AGAP011808-PA [Anopheles gambiae str. PEST] Length = 405 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 101/356 (28%), Gaps = 26/356 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +++ ++ K V A+KC + + L G +S E+ Sbjct: 31 PLNVLNLDDIVAKHRNWQ--AKLPTVAPFYAVKCNSHPTILRLLAALGCGFDCASRAELD 88 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + Y K A + F+ +L K ++ LR Sbjct: 89 SVLELGVTPDRIVYAHPNKSIGSIVHAKKLGVKRMTFDGSDELEKLAR--HYPEAELILR 146 Query: 122 INPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + + ++ L R ++ +V G+ FH + CF ++ Sbjct: 147 VRHDAAAAQLSLGRKFGCDQVRDARPLLERARELGLSVIGVSFHVGSGSMDAECFYGGIR 206 Query: 181 NIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---YLEPG 234 + F ++E + +GGG + + + ++ EPG Sbjct: 207 KAIEIFRVGSTLGMKMELLDVGGGYPGANGAL-FDRCAYYINKALKELVPTPVAVIAEPG 265 Query: 235 EAIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 + V + T V+ + + D Sbjct: 266 KYYVESAVTALVNVVSKSYEKDVDGAVVRVRYYVDDGLYDTFDWCDDQGSGPLLQEDKRG 325 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 +++ GR+ D+ E +IGD + F + Y NG P Sbjct: 326 APCVRSVIYGRTMCEHDVIREEISLPEHEIGDCLVFPNRGAYAKLLGRGHNGF-RP 380 >gi|213622587|ref|ZP_03375370.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 256 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 71/245 (28%), Gaps = 27/245 (11%) Query: 146 KCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT 205 ++ + G+ H + + +E IS GGG+ Sbjct: 9 AALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIP 67 Query: 206 DK---------DYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SEN 254 Y R + ++V++ +EPG +V + L T V + Sbjct: 68 YHEGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRYLVAQSGVLVTQVRSVKQMG 127 Query: 255 IKNLVIVDSSVEAHVPDYLLYQES--------ATIYPNTGPYTAMVCGRSCLAGDIF--- 303 ++ V+VD+ + + N +V G C +GD+F Sbjct: 128 SRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDVFTQQ 187 Query: 304 ----GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 E V GD + D Y + + +N + + + R + Sbjct: 188 EGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 247 Query: 360 NDYYN 364 + Sbjct: 248 EELLA 252 >gi|145502813|ref|XP_001437384.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124404534|emb|CAK69987.1| unnamed protein product [Paramecium tetraurelia] Length = 514 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 111/362 (30%), Gaps = 33/362 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV- 63 + + + +L N ++ + A+K + + G +S E+ Sbjct: 141 FMIYNSNELKNKVNQWKQAL--PWITPYYAIKSNPIDPILKVIVDGPYGTFDCASKGEIS 198 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + G Y+ K+ + + +T+ +L K + A ++ + Sbjct: 199 TVIKSGVPGSKIVYSNPVKEEKDIQYAKSMGVEITSADTIDELIKIQKIAPEMKILWRIS 258 Query: 122 INPSVSYSK----FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC---ENKSFLC 174 I + P K +I+ ++G+ FH + SF Sbjct: 259 IVEENPEQMATVFSGKFGDDIPDLDAAHKRFQQIQQMGIQLHGIHFHCGSAVQGSSSFGK 318 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + K K + ++ + +GGG + + + K ++ ++ EPG Sbjct: 319 AIDLAKECMKIGRLYGHKMILLDVGGGFPTGNIQENIIN--ALKKTENDPLGYEVIAEPG 376 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM--- 291 NT L ++ L + H + +L N Y+ Sbjct: 377 RHFSANTCYLLFRIMTKRIKHGRLCYHVNESLYHSFNCVLMDGITFENENDQLYSVFNSD 436 Query: 292 --------------VCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNG 336 + G +C D + +++GD + + Y I K+ FNG Sbjct: 437 GSQNTQNSDHSNVSIFGMTCDGHDALAKNITLPSDMQVGDWLCMSGMGSYTIGPKSRFNG 496 Query: 337 IN 338 + Sbjct: 497 MK 498 >gi|149202269|ref|ZP_01879242.1| Putative Ornithine decarboxylase [Roseovarius sp. TM1035] gi|149144367|gb|EDM32398.1| Putative Ornithine decarboxylase [Roseovarius sp. TM1035] Length = 376 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 42/364 (11%), Positives = 96/364 (26%), Gaps = 24/364 (6%) Query: 1 MIKTP----YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGT 55 M +TP Y +L + A+K + + + + Sbjct: 15 MRQTPDAALLY-FSPDQLQATAQAFQAGFPG---LVTYAVKANPGAEVLANLVAAGITAF 70 Query: 56 TSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 +S E+ YN + V + + ++ L + ++ Sbjct: 71 DVASPEEMRAVRSVCPAAVLHYNNPVRSVPEIEVAAQMGVRSY-SIDDLRELDKLTGRIA 129 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-FHNNCENKSFLC 174 + + ++ + + + M FH + + Sbjct: 130 PDAEITVRLALPVRGAAYDFGAKFGVGPERAAELLRVVADRGFTPSMTFHPGTQCADPVA 189 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQ 228 + A + + + ++ +++GGG + + Sbjct: 190 WGAYIGVVAEVARSAGVRLARLNVGGGFASHRTGTMPNLGAIFTHIGAEVARVFGADAPA 249 Query: 229 IYLEPGEAIVTNTTTLNTTV------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + EPG A+V +L V I N + + PD + Sbjct: 250 LVCEPGRAMVAEAFSLAVRVKALRETGAIFVNDGVYGGLTEIRDIGAPDRITVLAPDGTP 309 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 P+ +V G +C + D + + GD + + Y FNG + Sbjct: 310 RTGAPHPRVVFGPTCDSIDRLPDPLPLPGDLAEGDYLLIAGMGAYTRCLSTDFNGYGLRD 369 Query: 342 IAVK 345 + Sbjct: 370 VVTV 373 >gi|63002636|dbj|BAD97830.1| ornithine decarboxylase [Prunus persica] Length = 330 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 88/334 (26%), Gaps = 43/334 (12%) Query: 33 LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLS 91 A+KC + L G +S E+ + Y K S Sbjct: 1 FYAVKCNPDPFVLRLLAAMGTGFDCASKAEIDMVLRLGVDPSRIIYAQPCKTKSYVRYAS 60 Query: 92 NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI 151 + +K K ++ LRI S S L+ Sbjct: 61 KQGVRQMTFDNSDELYKIKELFPDAELYLRILTDDSASLCRLSLKFGASLDDTGDLLALA 120 Query: 152 ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKD 208 NV G+ FH F +++ F ++ + +GGG Sbjct: 121 RKLDLNVVGVAFHVGSGASDPAAFLKAVRDTRFVFDQANALGYDLKTLDVGGGF----VS 176 Query: 209 YPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISE-------NIKNL 258 D L ++Y + EPG V++ T+ V+ + Sbjct: 177 ETFDDMAAVLSVALDEYFPPSVRVIGEPGRYYVSSAFTIACNVIARRSVEDKALGVNSYM 236 Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTG------------------------PYTAMVCG 294 + ++ V + + + P + G Sbjct: 237 LYLNDGVYGNFSSIMFDHQHPIPRVLKAQNDTLATYNNHSDAVAAYDAATKLPLEYSIWG 296 Query: 295 RSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYN 327 +C D E + + + +GD + F ++ Y Sbjct: 297 PTCDGIDCISESWTCAQTLDVGDWLYFPNMGAYT 330 >gi|218458428|ref|ZP_03498519.1| diaminopimelate decarboxylase protein [Rhizobium etli Kim 5] Length = 179 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 43/155 (27%), Gaps = 5/155 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP+Y+ L + + + A+K + + TL + G S Sbjct: 25 VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84 Query: 62 EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116 E+ ++ A+ + + +L +A Sbjct: 85 ELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIYCFNVESEPELEILNQRAVSAGKKA 144 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI 151 + RINP V + ++ G + Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERAR 179 >gi|333015577|gb|EGK34916.1| diaminopimelate decarboxylase domain protein [Shigella flexneri K-227] Length = 231 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 67/223 (30%), Gaps = 27/223 (12%) Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKD 213 H + + F ++ IS GGG+ + Y Sbjct: 1 MHIGSGVDYAHLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLW 59 Query: 214 FCQRLKEFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPD 271 R + + V++ +EPG +V + L T V + ++ V+VD+ + Sbjct: 60 NAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRP 119 Query: 272 YLLYQESA--------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGD 316 + + +V G C +GD+F E VK GD Sbjct: 120 AMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGD 179 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + D Y + + +N + + + R + Sbjct: 180 YLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 222 >gi|83956357|ref|ZP_00964782.1| Orn/DAP/Arg decarboxylase, family 2 [Sulfitobacter sp. NAS-14.1] gi|83839405|gb|EAP78588.1| Orn/DAP/Arg decarboxylase, family 2 [Sulfitobacter sp. NAS-14.1] Length = 411 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 57/404 (14%), Positives = 117/404 (28%), Gaps = 61/404 (15%) Query: 18 LDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY 77 L + K+ + K + +++ G S +E+ ++ Sbjct: 2 LKVWNNTFAKS--KVYWSYKTNYMPEVCRAAHEHGLGADFVSGFELEHARRMCPEGPFSF 59 Query: 78 NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK---------KIGLRINPSVS 127 N + E+ + TI + + +++ + + G+ + S Sbjct: 60 NGPLKRKSELLQAIEMGATINVDLLEEIDAIRTIVSQRPTLTPRLGIRVNPGVPLFDSHD 119 Query: 128 YSKFILADPNRPFSRLGEK--------CKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 S + S+ G +K+ V+ L H + + + F A L Sbjct: 120 TSFLEKHSDSISVSKFGWPISDGAARIAVEKVIDAGLTVSALHCHLSSQITNHEHFLAAL 179 Query: 180 K---NIEKEFGHFITQIEWISLGGGIH-------------------------FTDKDYPV 211 + + + ++E I +GGG + + + Sbjct: 180 RPVLDFASDLIGQGVELEEIDIGGGFGVKGLVRDKIGWWGQLRERMGEPLPQEESQAFDM 239 Query: 212 KDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH 268 F LK + + I EPG +V++ L T V+ I +V Sbjct: 240 PSFATSLKTELSERGLEDLTISCEPGRYLVSDAMALLTRVVGIKRLEGKTWLVVDGGLNI 299 Query: 269 VPDYLLYQESATIYPNTG--------PYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRIS 319 +P + + N + G C GD+ + GD + Sbjct: 300 LPTASFGERRGLRFFNHEGEFPPSDYTEKCSIGGPLCYEGDVIMPSAMMPATIAAGDLVM 359 Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 D Y ++R FN + + T R +Y D + Sbjct: 360 ISDAGAYTVSRSTNFNQL-RAAAVSFDGSDTQTVWRRENYADVF 402 >gi|83859249|ref|ZP_00952770.1| ornithine decarboxylase, putative [Oceanicaulis alexandrii HTCC2633] gi|83852696|gb|EAP90549.1| ornithine decarboxylase, putative [Oceanicaulis alexandrii HTCC2633] Length = 418 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 40/334 (11%), Positives = 94/334 (28%), Gaps = 22/334 (6%) Query: 23 YIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNV-- 79 + + N ++L A+K + + DTL +SL EV L + T A+ Sbjct: 34 WFQNNFPGEVLYAVKSNPSAWVIDTLYAAGMRWFDVASLNEVELIASRCPDATMAFMHPV 93 Query: 80 -AYKDCEIDAVLSNCDTIIFNTVSQLNKF---KDKAQKLHKKIGLRINPSVSYSKFILAD 135 + + + + ++L K A+ L + + ++ + Sbjct: 94 KSRRAINKAYFDYGVRIFVLDCEAELEKILVETGYAKDLTLVVRIAVSNDGATLPLAGKF 153 Query: 136 PNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEW 195 + + ++ ++ V FH + + + + ++ + ++ Sbjct: 154 GASEDDAVELIQRARVYADELGV---SFHVGSQCMAPSAYRGAMLDVSRLIKRAAVTVDI 210 Query: 196 ISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + +GGG + + + + LE + L I + Sbjct: 211 VDVGGGFPVAYPGMTPPPLSEYVAAIENAFEEMMVLENADLWCEPGRALCAESTSILTRV 270 Query: 256 KNLVIVDSSVEA-----HVPDYLLYQESATIYPNTGPYT------AMVCGRSCLAGDIFG 304 + + + + + G +C A D Sbjct: 271 ELVKGDQVYLNDGAYGTLFDLVHMKWPYPIRVHRAKGEPSGQTAGFRLYGPTCDAIDAVS 330 Query: 305 EFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 + GD I F + Y + FNG Sbjct: 331 APVELPVDLSEGDVIEFAMLGAYGVAMATRFNGF 364 >gi|312972942|ref|ZP_07787115.1| diaminopimelate decarboxylase domain protein [Escherichia coli 1827-70] gi|310332884|gb|EFQ00098.1| diaminopimelate decarboxylase domain protein [Escherichia coli 1827-70] Length = 231 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 67/223 (30%), Gaps = 27/223 (12%) Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKD 213 H + + F ++ IS GGG+ + Y Sbjct: 1 MHIGSGVDYAHLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLW 59 Query: 214 FCQRLKEFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPD 271 R + + V++ +EPG +V + L T V + ++ V+VD+ + Sbjct: 60 NAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRP 119 Query: 272 YLLYQESA--------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGD 316 + + +V G C +GD+F E VK GD Sbjct: 120 AMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGD 179 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 + D Y + + +N + + + R + Sbjct: 180 YLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 222 >gi|163741356|ref|ZP_02148747.1| Putative Ornithine decarboxylase [Phaeobacter gallaeciensis 2.10] gi|161385090|gb|EDQ09468.1| Putative Ornithine decarboxylase [Phaeobacter gallaeciensis 2.10] Length = 383 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 103/358 (28%), Gaps = 23/358 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEV 63 P + L + + + A+K + + + + +S E+ Sbjct: 23 PILYFSPRVLHEVANRFQHGFPG---LVTYAVKANPHPAVLSNLVAAGITAFDVASPAEM 79 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 YN + A + + + S+L+K D + + Sbjct: 80 DAVRAASPDAVMHYNNPVRSDVEIAAGIAHGVASWSVDEPSELDKLADVPKSCEIAVRFA 139 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + F P + + E + FH + + + + Sbjct: 140 LPVAGAAYDFGSKFGAEPDMAIELLKRVAAEGWTPAL---CFHPGTQCEDESAWVEYVHA 196 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQIYLEPGE 235 ++ +I +++GGG + + EPG Sbjct: 197 AKRIIDAAGVKIARLNVGGGFAANRDGVAPDLEKVFAAISAAAEAAFGAEQPLLICEPGR 256 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATI-----YPNTGPY 288 A+V+ + TL + + + + + + D + D L + Sbjct: 257 AMVSESFTLAARIKGMRKAGEVVFLNDGIYGGLVDIRDMGLPGRVEVVAADGTRRGADAQ 316 Query: 289 TAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 +V G +C + D + +IGD + F + Y+ FNG + +A Sbjct: 317 PRVVFGPTCDSLDRLPDGLPLPRDTQIGDYVLFPGLGAYSSAMSTQFNGYGLSDVATV 374 >gi|240172617|ref|ZP_04751276.1| putative S-adenosylmethionine decarboxylase [Mycobacterium kansasii ATCC 12478] Length = 647 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 93/337 (27%), Gaps = 20/337 (5%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 M +TPY ID ++ +NL + A+K + L +S+ Sbjct: 1 MRETPYLTIDLARVRDNLQALRAALPE--ASIRYAVKANPGEPVLRLLAGEGAEFDVASV 58 Query: 61 YEVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ G A+ A S +F+T L + A + Sbjct: 59 GEIDACRLAGIDGSRLAFGNTIKKPAAVGHAYASGVRRFVFDTHEGLAAIAEHAPGASVE 118 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + S + F P + G + + FH + + Sbjct: 119 CRIAPAFPSSVTPFGHKFGCAPDAAAGLLTR--ARRLGLRPVAIAFHVGSQQLDPAAWDL 176 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYL 231 ++ F +E + GGG + L + ++ + Sbjct: 177 GIRCCADIFEQLGGALEV-NAGGGFPVPYATVAPQLPVLADAITSALTRYFGADRPRLVV 235 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS---VEAHVPDYLLYQESATIYPNTGP- 287 EPG +V + + V+ + V Y G Sbjct: 236 EPGRLLVGSAGIIAAEVVSVRTGTDGRRWVYLDIGRYGGLAETENEYIRYRLRTDRDGDP 295 Query: 288 -YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322 A+V G +C D+ + ++ GD + ED Sbjct: 296 AADAVVAGPTCDGDDVLYRSYALPVTLRAGDGVQIED 332 >gi|212212809|ref|YP_002303745.1| ornithine decarboxylase [Coxiella burnetii CbuG_Q212] gi|212011219|gb|ACJ18600.1| ornithine decarboxylase [Coxiella burnetii CbuG_Q212] Length = 400 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 115/351 (32%), Gaps = 24/351 (6%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77 Y G ++L A+K + ++ + +S E+ + E G + Sbjct: 32 RAVNYFCTQFGGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKEYAPGAELYF 91 Query: 78 NVAYKDCEID---AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-LRINPSVSYSKFIL 133 K + + +L K + LR+ ++++F L Sbjct: 92 MHPVKSPHAIREAYFEYGVRHFSLDCLEELRKILRHTENAKDLCLHLRLAIPNTFAEFNL 151 Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193 A+ + ++ + G+ FH + + ++ +K +I Sbjct: 152 AEKFGINLHEAPELLKQLRKAAYQL-GVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEI 210 Query: 194 EWISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN 245 E+ ++GGG Y + K +Q+ EPG ++V +T++ Sbjct: 211 EFFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVI 270 Query: 246 TTVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 V ++I + D+ + + L + T + P++ G +C + Sbjct: 271 VNVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDS 328 Query: 300 GDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348 D G F+ +K GD I + Y FNG + + + + Sbjct: 329 LDYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 379 >gi|327269438|ref|XP_003219501.1| PREDICTED: antizyme inhibitor 1-like isoform 2 [Anolis carolinensis] Length = 451 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 50/374 (13%), Positives = 114/374 (30%), Gaps = 34/374 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D KL+ + + +K +KC + G+ + L G SS E+ L Sbjct: 40 FFVGDLGKLIKHHIHWQNVMAP--IKPFYNVKCNSTPGVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E ++ K + + ++L K + K+ L I Sbjct: 98 VQDLGISSENILFSNPCKQASQIKYAAKTGVNVLTCDNELELKKIARNHPNAKLLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ F+ + K + + + Sbjct: 158 EDINGGEEMNMMFGTTLKNCRHLMECAKELNVQIIGVKFNVSNSCKEPQVYKHAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEKYSVQIYLEPGEAIV 238 F F + +++G G + D + F E+ V + E G V Sbjct: 218 VFDMAEEFGFTMNMLNIGSGFTDYEFDLEKINHVVSPLLDIYFPEESGVNVIAEAGCYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--DYLLYQESATIYP------------- 283 ++ TL ++ ++ S + ++P D + Sbjct: 278 SSAFTLAVNIIAKKAVQSTEPLLFKSKQNNLPGDDQVFMYYINDGVYGSFASKLSDNLTT 337 Query: 284 ----------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + + + + G SC D E + +GD + F+++ + ++ Sbjct: 338 IPEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELNVGDWLLFDNMGSGTLGEQSA 397 Query: 334 FNGINMPTIAVKNV 347 FN P + Sbjct: 398 FNDFQRPPVYYIMS 411 >gi|289644267|ref|ZP_06476354.1| Orn/DAP/Arg decarboxylase 2 [Frankia symbiont of Datisca glomerata] gi|289505915|gb|EFD26927.1| Orn/DAP/Arg decarboxylase 2 [Frankia symbiont of Datisca glomerata] Length = 562 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 55/414 (13%), Positives = 94/414 (22%), Gaps = 72/414 (17%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----------------- 48 Y+ D N + A+K + D L Sbjct: 73 AYIYDLDVAAGNAARLKAALP-PWAAIFYAVKANGYPPVLDALAAGHGHGHGAQQAHSAQ 131 Query: 49 -----------NQYMDGTTSSSLYEVMLGHE-----KFGGETHAYNVAYK-----DCEID 87 Q +DG +S +E+ L + Sbjct: 132 HTGSTGRSLPTGQGVDGFEVASSHEIQLALDSAQRIGRPARIVVSGPGKSVPLLATLVEA 191 Query: 88 AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEK 146 A T+ + +L + A + ++I + + + S + S G Sbjct: 192 ARAGAEMTVNVESPGELRRLNHVAGRAGRQIPVTLRVNPSRVALAGSLRMGGEASAFGIP 251 Query: 147 CKD-------KIESEIKNVNGLMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEW 195 D +V G H N L + Sbjct: 252 EADVPDVLAIARSLPWVDVAGFHVHAVSGNLDAAAHLDYVRWCLGYAADTAAAHGVDLRV 311 Query: 196 ISLGGGIHFT-------DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 + +GGG+ + + + F L+ V++ EPG +V + V Sbjct: 312 VDVGGGLGVPFEPDRRGECPFDLDAFAAGLRATPVPAGVRVLFEPGRWLVADCGAYAAEV 371 Query: 249 LDISENIKNLVIVDSSVEAHV-PDYLL------------YQESATIYPNTGPYTAMVCGR 295 D+ +V H P+ V G Sbjct: 372 TDVKHAHGTDFVVLRGGIHHFQLPASWEIVHNFGVVAVDDWPYDFPRPDVAGRPVTVVGE 431 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKNVD 348 C D V+ GD + F Y F G P + D Sbjct: 432 LCTPEDTLARDITVDAVRAGDIVVFPMAGAYGYEFAMQGFLGHPPPVRVAVSRD 485 >gi|160872358|ref|ZP_02062490.1| decarboxylase, pyridoxal-dependent [Rickettsiella grylli] gi|159121157|gb|EDP46495.1| decarboxylase, pyridoxal-dependent [Rickettsiella grylli] Length = 395 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 98/358 (27%), Gaps = 32/358 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63 P ++ + ++ + ++L A+K + L+ +S E+ Sbjct: 17 PVFVFRPNIMECAINYFRTRFQG---RILYAVKTNPERQVIHLLHHQGIHDFDVASYEEI 73 Query: 64 MLGHEKFGGETHAYNVAYKD---CEIDAVLSNCDTIIFNTVSQLNKFKDK---AQKLHKK 117 + + K + +++ +L K A+ L Sbjct: 74 RMIKSILPDAGLYFMHPVKSSFAIQEAYFNYGVRHFALDSLDELKKIVRYTNNAKDLCLH 133 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + L I + + K + + + FH + + Sbjct: 134 LRLAIPNTFAEFNLSAKFGIHLDEAPELLKKVRKVAYKLGIT---FHVGSQCMHPDAYRI 190 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--------VQI 229 ++ K G IE+ +GGG E++ +++ Sbjct: 191 AIRLANKLIGQSKIAIEYFDVGGGFPSIYPGMTPPPLEIYFNVIHEEFKEISKKFPTIEL 250 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY- 288 EPG +V +T++ V +N + + D + + Y Sbjct: 251 LCEPGRCLVAESTSVIVRVESRKKNQLYINDGTYGS---LFDAGIPHFIFPVRLIKKSYR 307 Query: 289 ------TAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 G +C D G F+ +K G+ I V Y FNG Sbjct: 308 KNKDLIPYSFYGPTCDCLDYMQGPFYLPSDIKEGNYIEIGQVGAYGRTLSTGFNGFKH 365 >gi|254503042|ref|ZP_05115193.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Labrenzia alexandrii DFL-11] gi|222439113|gb|EEE45792.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Labrenzia alexandrii DFL-11] Length = 406 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 102/362 (28%), Gaps = 32/362 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEV 63 P Y L + + K A+K + L D +S E Sbjct: 19 PIYCFRPSVLRADAQNFKKLFPG---KTAYAVKTNGEPFVLKELAAAGYDCFDVASPAEF 75 Query: 64 MLGHEKFGGETHAYNVAYK---DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119 E Y K D + + + ++ K + L Sbjct: 76 AAVREASPKAEMLYMHPIKAQSDIRLALEQYGIRVMSLDHEDEVAKILRIVRALDIDPAK 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSA 177 + + ++ + ++ F + ++ + GL FH + + + Sbjct: 136 ITLFVRIATKGHAAYELSKKFGAAPGHAVELLQRIHRIGFKCGLCFHVGSQIEEPETYER 195 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---------LKEFSEKYSVQ 228 L + + I + +GGG P + ++ +++ Sbjct: 196 ALASADWIRSRAGVPIVELDVGGGFPAVYGHDPRRKVPDLPTLEELMGQIRSDIAEWAFD 255 Query: 229 IYL---EPGEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHV-PDYLLYQESA 279 EPG +V + +L VL + N + S + + A Sbjct: 256 DIPLVAEPGRVVVARSISLIVRVLLKKGRRLYINDGIWASLSDSWTGKITLPARFIPDPA 315 Query: 280 TIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFN 335 + VCG +C + DI + V GD I + Y+++ + FN Sbjct: 316 RRTRSGKAGNIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTRFN 375 Query: 336 GI 337 G Sbjct: 376 GF 377 >gi|242071387|ref|XP_002450970.1| hypothetical protein SORBIDRAFT_05g021830 [Sorghum bicolor] gi|241936813|gb|EES09958.1| hypothetical protein SORBIDRAFT_05g021830 [Sorghum bicolor] Length = 426 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 44/363 (12%), Positives = 96/363 (26%), Gaps = 33/363 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE- 62 T +++ +++ V+ A+KC + L G +S E Sbjct: 55 TAFHVFHINTVVDLFSAWRRAL--PDVRPFYAVKCNPDPALLGALAALGAGFDCASRAEM 112 Query: 63 -VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 +L G+ N + ++ + T ++ A+ L Sbjct: 113 EAVLALGVGVGDLIYANPCKAEPHLEYAAAAGV--ALATYDTESEVAKVARCHPNCELLL 170 Query: 122 INPSVSYSKFILADPNRPF--SRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFL 173 + ++ G + + V G+ FH Sbjct: 171 RLKGPDGGTTVAGGGRGGDLMNKYGAHADEVSPLLRAAQRAGVRVAGVSFHVGSPVSRSR 230 Query: 174 CFSAMLKNIEKEFGHF------ITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFS 222 + + + +GGG + Sbjct: 231 VGVYRGAIESARAAFDAAAALGMPPMRVLDIGGGFSAGAAFDEAAAVINGALADAFGDLL 290 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQE 277 V++ EPG TL V+ + S+ + D+ + + Sbjct: 291 RCRRVEVIAEPGRYFAETAFTLAARVIGRRARGEAREYWIDDGLYGSLNNVLMDHKVPRP 350 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 +++ V G +C + D + + +GD + F+D+ Y+ + F Sbjct: 351 RPLAAGGEEKTTTHSSTVFGPTCDSQDQVVTGYPLPEMSVGDWLVFDDMGAYSTGAGSKF 410 Query: 335 NGI 337 NG Sbjct: 411 NGF 413 >gi|327269436|ref|XP_003219500.1| PREDICTED: antizyme inhibitor 1-like isoform 1 [Anolis carolinensis] Length = 449 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 48/372 (12%), Positives = 111/372 (29%), Gaps = 32/372 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D KL+ + + +K +KC + G+ + L G SS E+ L Sbjct: 40 FFVGDLGKLIKHHIHWQNVMAP--IKPFYNVKCNSTPGVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E ++ K + + ++L K + K+ L I Sbjct: 98 VQDLGISSENILFSNPCKQASQIKYAAKTGVNVLTCDNELELKKIARNHPNAKLLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ F+ + K + + + Sbjct: 158 EDINGGEEMNMMFGTTLKNCRHLMECAKELNVQIIGVKFNVSNSCKEPQVYKHAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEKYSVQIYLEPGEAIV 238 F F + +++G G + D + F E+ V + E G V Sbjct: 218 VFDMAEEFGFTMNMLNIGSGFTDYEFDLEKINHVVSPLLDIYFPEESGVNVIAEAGCYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--------------- 283 ++ TL ++ ++ + + D + Sbjct: 278 SSAFTLAVNIIAKKAVQSTEPLLFKTEQTQGDDQVFMYYINDGVYGSFASKLSDNLTTIP 337 Query: 284 --------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 + + + + G SC D E + +GD + F+++ + ++ FN Sbjct: 338 EVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELNVGDWLLFDNMGSGTLGEQSAFN 397 Query: 336 GINMPTIAVKNV 347 P + Sbjct: 398 DFQRPPVYYIMS 409 >gi|269964928|ref|ZP_06179098.1| Diaminopimelate decarboxylase [Vibrio alginolyticus 40B] gi|269830404|gb|EEZ84628.1| Diaminopimelate decarboxylase [Vibrio alginolyticus 40B] Length = 222 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 53/197 (26%), Gaps = 6/197 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ +TL + G S E Sbjct: 27 GTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86 Query: 63 V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117 + + + ++ K A+ + +L + A +L Sbjct: 87 LERVIAAGGDPKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVIAP 146 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 I LRINP V ++ G + + + FSA Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPDVYKFAQSLPNLNV-QGIDVPHWFSA 205 Query: 178 MLKNIEKEFGHFITQIE 194 + Sbjct: 206 DQYRPIYRRDRPFIGPD 222 >gi|300787100|ref|YP_003767391.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] gi|299796614|gb|ADJ46989.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] Length = 442 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 57/397 (14%), Positives = 112/397 (28%), Gaps = 42/397 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 +D + ++ G V+ +A K + L +S E + Sbjct: 34 VDLATVREAVEDLTEAFAPLGRVQHTVAAKACGLAPLLRFLGDLGIDAEVASPGETAVAE 93 Query: 68 EKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRIN 123 G + A E+ L+ + + +L + A +GLRIN Sbjct: 94 AAGLRGPRLVLDSPAKTTAELAHALAEGTAVNADNFQELARLDRLVGAAPPRSVLGLRIN 153 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD-----KIESEI---KNVNGLMFHNNCENKSFLCF 175 P V + S+ G +D + + L H + Sbjct: 154 PQVGAGRIGDTSTATAASKFGIPLRDNGSRALLREAFTRRPWLTRLHVHVGSQGCPPELM 213 Query: 176 SAMLKNIEKEFGHFITQIEWI-----SLGGGIHFTDKDY-PVKDFCQRLKEFSEKYS--- 226 + + + + + LGGG+ P + + + Sbjct: 214 ADGVAAAHELAEEINAEAGYRQVTSLDLGGGLPVDFTSDAPGPTYAGYVATLLARVPSLG 273 Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYL 273 E G +++ + L +TV ++ + H Sbjct: 274 DGRYAFVTEFGRSLLAKSGFLVSTVEYTKVAGGRHIAVTHAGGQVAARTVLQPEHW-PLR 332 Query: 274 LYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + AT P TGP A + G C AGD+ ++ GD + D Y Sbjct: 333 IGAFDATGVPKTGPEVAQDIAGPLCFAGDLLARERPLPLLEPGDLVVAHDTGAYYFGAHY 392 Query: 333 WFNGINMPTIA--VKNVDGTIK---AIREFSYNDYYN 364 +N + P + + G ++ R + ++ Sbjct: 393 AYNTLPRPAVYGFTVSGRGDVEFTPLRRAQTLDELVA 429 >gi|307292864|ref|ZP_07572710.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1] gi|306880930|gb|EFN12146.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1] Length = 397 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 103/359 (28%), Gaps = 27/359 (7%) Query: 26 KNAGVKLLLALKCFAAWGMFDTL-NQYMDGTTSSSLYEVMLGHEKFGG--ETHAYNVAYK 82 + + L A+K + + TL + +S+ EV L E G + + Sbjct: 37 EKFPGRSLYAVKANPSPDLIRTLFASGITHFDVASIAEVRLVAEALEGQGKLCFMHPVKA 96 Query: 83 DCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF 140 + + + T +++ +L K +A + L + VS L+ ++ Sbjct: 97 EEAVAEAYHVHGVRTFSLDSMDELAKIM-RATNDATDLELCVRLRVSSEHSELSLASKFG 155 Query: 141 SRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISL 198 + LGE ++ + + + + G+ FH + S +S ++ + ++ + + Sbjct: 156 AELGET-RELLMATRQAADALGICFHVGSQAMSPQAYSDAIERVRAAIVDAAVTVDIVDV 214 Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 GGG + E L+ + ++ Sbjct: 215 GGGFPSVYPGMEPPALEAYFDAIHRGFESLPVSYSSELWCEPGRALSAEYSSVVVRVERR 274 Query: 259 VIVDSSVEA-----HVPDYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIF-GEFH 307 + + + G +C D G F Sbjct: 275 RGTELYINDGAYGALFDAAHIGWRFPVALLREEESEAELTGFSFYGPTCDDMDHMVGPFM 334 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-------GTIKAIREFSY 359 + V+ GD I + Y + FNG I + T R + Sbjct: 335 LPEDVQAGDYIEIGMLGAYGAAMRTGFNGFTSEAIIEVEDEPMASLYVDTAPVRRRATV 393 >gi|239993649|ref|ZP_04714173.1| putative diaminopimelate decarboxylase [Alteromonas macleodii ATCC 27126] Length = 180 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 60/173 (34%), Gaps = 10/173 (5%) Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKY----SVQIYLEPGEAIVTNTTTLNTTVLDISE- 253 GGG+ T + + +EK ++++ LEPG AI N L T V I E Sbjct: 1 GGGLGVTYNNEQPPHPKAYAQAMAEKMVGRENLKLILEPGRAIAANAGILVTEVEFIKEG 60 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFE 309 K+ IVD+++ + L I P V G C GD G+ Sbjct: 61 EEKSFAIVDAAMNDLLRPALYSAWQKIIPVKEETTATPRIYDVVGPVCETGDFIGKDREL 120 Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 ++ D ++ Y + +N P + + D I D Sbjct: 121 A-IEPTDLLAVRSAGAYGFVMASNYNSRCRPAEIMVDGDKAIVVREREKQKDL 172 >gi|118371177|ref|XP_001018788.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Tetrahymena thermophila] gi|89300555|gb|EAR98543.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Tetrahymena thermophila SB210] Length = 636 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 61/364 (16%), Positives = 113/364 (31%), Gaps = 37/364 (10%) Query: 6 YYLI-DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 + + + L L+ K + ++ ALK + + L G +S E+ Sbjct: 237 FLVYNSHEALRK-LNAWRS--KLSWIQPFYALKSNPIDPLVEDLCSNGAGLDVASQGEIK 293 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 G E Y+ K+ + A +N +T ++ K A + + Sbjct: 294 KGLEMGISASNMIYSNPVKEEKDILYAAQNNVLYTTADTFDEIVKIHTLAPNMKILWRIS 353 Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNC---ENKSFL 173 I S + ++ E + ++G+ FH + SFL Sbjct: 354 ITEDNSQQLATVFSNKFGDDITSLEDAHQKFKFIAQELGVRLHGIHFHCGSGKNGSSSFL 413 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 M + + + +E + LGGG D K ++ ++ EP Sbjct: 414 KAVNMARKCIEIGRQYGHAMEILDLGGGYPSGD--LNDKFIANLKDTCNDPLGYRVIAEP 471 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM-- 291 G + T L T +L + H + +L + N Y+ + Sbjct: 472 GRHFSSQTCYLFTRILAKRSKQGKTCFHVNDSLYHSFNCVLMDGVSFENDNDQFYSVVNN 531 Query: 292 -----------------VCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNW 333 V G +C D+ F K+GD + F + Y K+ Sbjct: 532 NTLEQSEINKNSMINSSVFGMTCDGADVIARNVGFCGDAKVGDWLCFSGMGSYTFGPKSA 591 Query: 334 FNGI 337 FNG+ Sbjct: 592 FNGM 595 >gi|118590930|ref|ZP_01548330.1| ornithine decarboxylase [Stappia aggregata IAM 12614] gi|118436452|gb|EAV43093.1| ornithine decarboxylase [Stappia aggregata IAM 12614] Length = 406 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 100/362 (27%), Gaps = 32/362 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEV 63 P Y L ++ + K A+K + + L + +S E Sbjct: 19 PVYCFRPDVLKHDAQQFQSLFPG---KTAYAVKTNGEPFVLEALAKAGISCFDVASPAEF 75 Query: 64 MLGHEKFGGETHAYNVAYK---DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119 + Y K D + T+ + ++ K + L G Sbjct: 76 ASVKKAAPKAEMLYMHPIKAQSDIRLALETYGIRTLSLDHEDEVAKILRIVRALDIDPGT 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSA 177 + + ++ + ++ F + ++ + GL FH + + + Sbjct: 136 ITLFVRIATKGHAAYELSKKFGAAPGHAVELLQRINRIGFKCGLCFHVGSQIEEPETYER 195 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---------LKEFSEKYSV- 227 L + + I + +GGG P + + LK + Sbjct: 196 ALASADWIRSRAGVPIVELDVGGGFPAVYGHDPRRKVPEMPTLEALMGQLKADIADWQFD 255 Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI---------VDSSVEAHVPDYLLYQ 276 + EPG IV + +L VL + + Sbjct: 256 DLPLVAEPGRVIVARSISLIVRVLLKKGRRLYINDGIWASLSDSWTGKITLPARFIPDPA 315 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFN 335 VCG +C + DI + V GD I + Y+++ + FN Sbjct: 316 RKTRAGQPDKIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTRFN 375 Query: 336 GI 337 G Sbjct: 376 GF 377 >gi|255994175|ref|ZP_05427310.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein [Eubacterium saphenum ATCC 49989] gi|255993843|gb|EEU03932.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein [Eubacterium saphenum ATCC 49989] Length = 396 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 47/378 (12%), Positives = 104/378 (27%), Gaps = 35/378 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P Y+ +++ + V L ++K + + + S E+ Sbjct: 14 SPSYIFSEEEFASRAALVRESFGE-DVNLCFSIKANPF--LLGIMPDQISKVEVCSPGEL 70 Query: 64 MLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + K E ++ K E A+ I + ++ A ++ L Sbjct: 71 DVCKRLKLPPEMIIFSGVNKSKEEIRVALEYGVRNITAESKKHVDYINSVATDMNITCDL 130 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + S L K++ E + + GL + + + + Sbjct: 131 LLRLSDESQ------FGIDGDELLGYIKNRDEYKGFKIAGLHYFTGTQKRRPSAIMKEID 184 Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEKYSVQIYL- 231 IE I G G+ + + ++ S + L Sbjct: 185 KFMAYIDRVEADANFNIERIEYGTGLAVDYFSKDALNEETARIKEIAPKIKELSKKADLT 244 Query: 232 -EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPD-YLLYQES 278 E G T V+D N + +P+ + Sbjct: 245 VEMGRFFSAPCGYYVTEVMDTKVNDGVHYAIVDGGIHQLKYDGQTQGMQIPEITHIKNSQ 304 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGI 337 + +G +CG C D+ + D + F Y+++ + Sbjct: 305 SCDEVGSGTNKWTLCGSLCTTADVIARSVEFTDLNCKDLLVFHRTGAYSMDEGISLLLSR 364 Query: 338 NMPTIAVKNVDGTIKAIR 355 +MP+I + + + +R Sbjct: 365 DMPSIYILDKANQLNKVR 382 >gi|242826034|ref|XP_002488560.1| ornithine decarboxylase, putative [Talaromyces stipitatus ATCC 10500] gi|218712378|gb|EED11804.1| ornithine decarboxylase, putative [Talaromyces stipitatus ATCC 10500] Length = 426 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 100/357 (28%), Gaps = 34/357 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + + A+KC + L + G +S+ E+ Sbjct: 64 FFVADLGEIRRQHSRWMSHL--PNIMPFFAVKCNPDVELLQVLKELGVGFDCASVEEMQT 121 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + K A + + K ++ LRI Sbjct: 122 VLRLGAPSTSIIFANPCKTPHALAFAHGAGIKMTTFDNLDELDTIKNYMPDARLLLRIFA 181 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + S + L + + + + NV G+ FH F + + + Sbjct: 182 NDSNALVALGEKFGALPDSIQDLLMRAKDLNLNVVGISFHIGSGASDPSAFQKAIAHSRQ 241 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEAIVT 239 + ++ + +GGG T+ ++ + E S EPG Sbjct: 242 VWDSARSMGFFLQILDIGGGFQPTEAEFTPMATAIQSAISEASFPGQTIFMAEPGRFFAR 301 Query: 240 NTTTLNTTVLD------------ISENIKNLVIVDSSVEAHVP-----DYLLYQESATIY 282 + TL ++ + +N + + + A + L+ + Sbjct: 302 SVFTLVCRIISCRKSKATESPQRVDMLYQNDGVYGNFMNALIEREDFAPSLIITKGHLPR 361 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA--GYNINRKNWFNGI 337 + + + G +C + D ++ G Y FNG Sbjct: 362 KSEY-HAYTIWGPTCDSTDCVSRKASFALLR-GML-----TGKPAYTSATATNFNGF 411 >gi|294011712|ref|YP_003545172.1| ornithine decarboxylase [Sphingobium japonicum UT26S] gi|292675042|dbj|BAI96560.1| ornithine decarboxylase [Sphingobium japonicum UT26S] Length = 397 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 100/359 (27%), Gaps = 27/359 (7%) Query: 26 KNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGET--HAYNVAYK 82 + + L A+K + + TL +S+ EV L E G E + Sbjct: 37 EKFPGRSLYAVKANPSPDLIRTLFACGVTHFDVASIAEVRLVAETLGNEAKLCFMHPVKA 96 Query: 83 DCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF 140 + I T +++ +L K +A + L + VS L+ ++ Sbjct: 97 EEAIAEAYHIHGVRTFSLDSMDELAKIM-RATNDATDLELCVRLRVSSEHSELSLASKFG 155 Query: 141 SRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISL 198 + LGE ++ + + + + G+ FH + S +S ++ + ++ I + Sbjct: 156 AELGET-RELLMATRQAADALGICFHVGSQAMSPQAYSDAIERVRAAIVDAAVTVDIIDV 214 Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 GGG + E L+ + ++ Sbjct: 215 GGGFPSIYPGMEPVALENYFDAIHRGFESLPISYSAELWCEPGRALSAEYSSVVVRVERR 274 Query: 259 VIVDSSVEA-----HVPDYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIF-GEFH 307 + + + G +C D G F Sbjct: 275 RGTELYINDGAYGALFDAAHIGWRFPVALLREEESEAELTGFSFYGPTCDDMDHMVGPFM 334 Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-------GTIKAIREFSY 359 V+ GD I + Y + FNG + + + R + Sbjct: 335 LPDDVQAGDYIEIGMLGAYGAAMRTGFNGFTSEAVVEVEDEPMASLYVDAVPVRRRATV 393 >gi|229057152|ref|ZP_04196542.1| Diaminopimelate decarboxylase [Bacillus cereus AH603] gi|228720158|gb|EEL71739.1| Diaminopimelate decarboxylase [Bacillus cereus AH603] Length = 199 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 17/190 (8%) Query: 193 IEWISLGGGIHFTDKDYPVK-----------DFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 ++ +++GGG D + E +I++EPG +IV + Sbjct: 1 MKVLNVGGGFGIRYTDSDTPLTLETYVHAVTSTIREQFTLCEYPLPEIWIEPGRSIVGDA 60 Query: 242 TTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295 T TV + E V + ++ L + + + G+ Sbjct: 61 GTTLYTVGAVKEIPGIRKYVSVDGGMTDNLRPALYGARYEAMLANRGNDENEELVSIAGK 120 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GD+ V D ++ Y + N +N I P + + + Sbjct: 121 CCESGDMLIWDINLPQVASSDLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVE 180 Query: 356 EFSYNDYYNN 365 +Y + N Sbjct: 181 RETYENIIGN 190 >gi|12018238|ref|NP_072107.1| antizyme inhibitor 1 [Rattus norvegicus] gi|13431728|sp|Q63764|AZIN1_RAT RecName: Full=Antizyme inhibitor 1; Short=AZI; AltName: Full=Ornithine decarboxylase antizyme inhibitor gi|1304190|dbj|BAA09365.1| antizyme inhibitor [Rattus norvegicus] gi|2641954|dbj|BAA23594.1| antizyme inhibitor [Rattus norvegicus] Length = 448 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 54/371 (14%), Positives = 112/371 (30%), Gaps = 31/371 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC + + + L G S+ E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYMVKCNSTPAVLEILAALGTGFACSTKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVSPENIIYTSPCKQASQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + + L + Sbjct: 158 EDNIGGEDGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHISSACKEYQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 F G F + + +GGG T+ ++ F E +QI EPG V Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSGIQIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKLSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDLNTVPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + +T+ + G SC D E + +GD + F+++ +++ + F+ Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELSVGDWLIFDNMGADSLHGPSAFSD 397 Query: 337 INMPTIAVKNV 347 P I Sbjct: 398 TQRPAIYFMMS 408 >gi|238060809|ref|ZP_04605518.1| orn/DAP/Arg decarboxylase 2 [Micromonospora sp. ATCC 39149] gi|237882620|gb|EEP71448.1| orn/DAP/Arg decarboxylase 2 [Micromonospora sp. ATCC 39149] Length = 422 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 53/381 (13%), Positives = 92/381 (24%), Gaps = 36/381 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P Y+ D ++ LL ++K + L SS E Sbjct: 14 GSPLYVYDLDRIDQAHADLRAALPTP-STLLYSMKANPHPVIARRLRLAGCRLEVSSAGE 72 Query: 63 VMLGHEKFGGETH--AYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK-I 118 + G A E++ ++ + S+L + A Sbjct: 73 LAAALLAGAGGGDLLYTGPAKTPAELEEAVAAGVRAFSVESFSELQRLGRAAAGQDADLT 132 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171 L + S+ G V GL + Sbjct: 133 ALLRVNGPGAAGGSGLRMTGTASQFGIDAGTLATEWSPDRVPDRVRVTGLHLFPITNARG 192 Query: 172 FLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 L+ + LGGG + QRL+ +E Sbjct: 193 EDQLLDELRAAVDTAAELARVCRLDPAVVDLGGGFSAPYAAPGSRPVYQRLRAEAETRLD 252 Query: 228 QIYL-----------EPGEAIVTNTTTLNTTVLDISENIKNLV-------IVDSSVEAHV 269 + E G +V TL TTV+D+ V + Sbjct: 253 AAFPGWRAGRPEVMFESGRYLVAECGTLLTTVVDVKHTRGRTYAVLDAGINVLGGMTGLG 312 Query: 270 PDYLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + T + G SC D+ G + G ++ +V Y + Sbjct: 313 RLLPMRALPVGSAETASDVTRVDLAGPSCTPLDVLGRDVPLPEARSGTVLAIPNVGAYGL 372 Query: 329 NRK-NWFNGINMPTIAVKNVD 348 + F MP + + Sbjct: 373 SASLVGFLSRPMPAEVLLSGG 393 >gi|165918435|ref|ZP_02218521.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA 334] gi|165917803|gb|EDR36407.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA 334] Length = 396 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 107/350 (30%), Gaps = 22/350 (6%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77 Y G ++L A+K + ++ + +S E+ + E G + Sbjct: 28 RAVNYFCTQFGGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKEYAPGAELYF 87 Query: 78 NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136 I F+ K + K + F + Sbjct: 88 MHPVKSPHAIREAYFEYAVRHFSLDCLEELHKILRHTENAKDLCLHLRLAIPNTFAEFNL 147 Query: 137 NRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194 F + + ++ K G+ FH + + ++ +K +IE Sbjct: 148 AEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEIE 207 Query: 195 WISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246 ++GGG Y + K +Q+ EPG ++V +T++ Sbjct: 208 SFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVIV 267 Query: 247 TVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 V ++I + D+ + + L + T + P++ G +C + Sbjct: 268 NVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDSL 325 Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348 D G F+ +K GD I + Y FNG + + + + Sbjct: 326 DYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 375 >gi|254475844|ref|ZP_05089230.1| diaminopimelate/ornithine decarboxylase [Ruegeria sp. R11] gi|214030087|gb|EEB70922.1| diaminopimelate/ornithine decarboxylase [Ruegeria sp. R11] Length = 405 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 44/361 (12%), Positives = 102/361 (28%), Gaps = 29/361 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEV 63 P + L + + A+K + + + + +S E+ Sbjct: 45 PILYFSPRVLHEVANRFQTGFPG---LVTYAVKANPHPAVLSNLVAAGITAFDVASPAEM 101 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 YN + A + + +V ++ A + + Sbjct: 102 DAVRAASPDAVMHYNNPVRSDAEIAAGIDHG-VASWSVDDASELAKLADVPKSCE-IAVR 159 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG-----LMFHNNCENKSFLCFSAM 178 ++ + S+ G ++ + G L FH + + + Sbjct: 160 FALPVAGAAYDF----GSKFGASPEEAVALLKAVTEGGWTPALCFHPGTQCEDESAWVEY 215 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQIYLE 232 + + +I +++GGG + + + E Sbjct: 216 IYAAKDIIAAAGVEIARLNVGGGFAANRDGVAPDLERVFEAIARAADAAFGDDKPLLICE 275 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATI-----YPNT 285 PG A+V+ + TL + + + + + + D + D L + Sbjct: 276 PGRAMVSESFTLAARIKGMRKAGEVVFLNDGIYGGLVDIRDMGLPGRVEVVAANGTRRQG 335 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 +V G +C + D + +IGD + F + Y+ FNG + +A Sbjct: 336 DRRPRVVFGPTCDSLDRLPDGLPLPEETRIGDYVLFPGLGAYSSAMSTQFNGYGLSDVAT 395 Query: 345 K 345 Sbjct: 396 V 396 >gi|328469042|gb|EGF39997.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus MTCC 5462] Length = 159 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 42/136 (30%), Gaps = 6/136 (4%) Query: 235 EAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPY 288 +IV TV + + V VD + ++ L + A Sbjct: 1 RSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNIRPALYQAQYTAVVADHPTAKPTE 60 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 + G+ C +GDI + + GD ++ D Y + + +N P I Sbjct: 61 HVHLVGKYCESGDILIDDAPLPATQPGDVVAVFDTGAYGYSMASNYNRNPRPAIVFVEDG 120 Query: 349 GTIKAIREFSYNDYYN 364 + SY D Sbjct: 121 QAQLVVTRESYADLIQ 136 >gi|161830669|ref|YP_001596639.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA 331] gi|161762536|gb|ABX78178.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA 331] Length = 396 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 106/350 (30%), Gaps = 22/350 (6%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77 Y ++L A+K + ++ + +S E+ + E G + Sbjct: 28 RAVNYFCTQFDGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKEYAPGAELYF 87 Query: 78 NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136 I F+ K + K + F + Sbjct: 88 MHPVKSPHAIREAYFEYGVRHFSLDCLEELHKILRHTENAKDLCLHLRLAIPNTFAEFNL 147 Query: 137 NRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194 F + + ++ K G+ FH + + ++ +K +IE Sbjct: 148 AEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEIE 207 Query: 195 WISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246 ++GGG Y + K +Q+ EPG ++V +T++ Sbjct: 208 SFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVIV 267 Query: 247 TVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 V ++I + D+ + + L + T + P++ G +C + Sbjct: 268 NVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDSL 325 Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348 D G F+ +K GD I + Y FNG + + + + Sbjct: 326 DYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 375 >gi|153207379|ref|ZP_01946116.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii 'MSU Goat Q177'] gi|120576688|gb|EAX33312.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii 'MSU Goat Q177'] Length = 396 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 107/350 (30%), Gaps = 22/350 (6%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77 Y G ++L A+K + ++ + +S E+ + E G + Sbjct: 28 RAVNYFCTQFGGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKESAPGAELYF 87 Query: 78 NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136 I F+ K + K + F + Sbjct: 88 MHPVKSPHAIREAYFEYAVRHFSLDCLEELHKILRHTENAKDLCLHLRLAIPNTFAEFNL 147 Query: 137 NRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194 F + + ++ K G+ FH + + ++ +K +IE Sbjct: 148 AEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEIE 207 Query: 195 WISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246 ++GGG Y + K +Q+ EPG ++V +T++ Sbjct: 208 SFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVIV 267 Query: 247 TVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 V ++I + D+ + + L + T + P++ G +C + Sbjct: 268 NVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDSL 325 Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348 D G F+ +K GD I + Y FNG + + + + Sbjct: 326 DYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 375 >gi|326494872|dbj|BAJ94555.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 503 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 112/377 (29%), Gaps = 42/377 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D + ++ V++ A KC + L+ +S E Sbjct: 105 FFVADLSAVYESVKMWRESAIGDRVEIFYAAKCCPTLPVLHLLSLLGVNFDCASTAEFQQ 164 Query: 66 GH---EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E + K + A ++ D + F+ +L K K + + Sbjct: 165 VLSLPSAPSPERIIFANPCKAPSMIRAAADAHVDMMTFDNADELYKVKKAHPNAKLVLRI 224 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + S S + L + G + NV G+ FH K FS + Sbjct: 225 LTDDSKSLCRLGLKYGAPLETCPGLLAL--AQQLGLNVIGVSFHVGSGCKDPAQFSDAIW 282 Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEA 236 K F +++ +GGG L + + V++ EPG Sbjct: 283 RSRKVFDMGKKVGYDFKFLDIGGGFERPTFAEMSDVVRDALDVYFPRESGVRVIAEPGRL 342 Query: 237 IVTNTTTLNTT-----------------------VLDISENIKNLVIVDSSVEAHVPDYL 273 +V++ TL T V+ + + PD Sbjct: 343 LVSSAFTLATNIIARRRALEPASVAAQEEGEGADVMYYINDGVYGSFNCILFDHVTPDTH 402 Query: 274 LYQESATI-------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAG 325 L T A + G +C + D +++GD + + ++ Sbjct: 403 LLTHQHQYVGATRQALEGTNTEMASIWGPTCDSMDCVRSLVRLPAGLQVGDWLGWSNMGA 462 Query: 326 YNINRKNWFNGINMPTI 342 Y + + FNG+N + Sbjct: 463 YTLCAASRFNGMNKSPV 479 >gi|296283679|ref|ZP_06861677.1| Orn/DAP/Arg decarboxylase 2 [Citromicrobium bathyomarinum JL354] Length = 400 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 87/350 (24%), Gaps = 25/350 (7%) Query: 31 KLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID-- 87 + L A+K + + L +S+ EV L + K Sbjct: 42 RALYAVKANPSPDLIRILWDNGITHYDVASIAEVRLVRGLLPDAELCFMHPVKPRSAIAE 101 Query: 88 -AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI------GLRINPSVSYSKFILADPNRPF 140 C T ++ +L K D + +R+ S +S+ LA Sbjct: 102 AYHQHGCRTFSLDSEEELAKIVDACRAPDGSPAKDLKLLVRLRVSSEFSELSLASKFGTD 161 Query: 141 SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200 + + G+ FH + + + L+ I+ I +GG Sbjct: 162 LIDAPVLLQQTRQHCDWL-GVCFHVGSQAMTPFAYVQALERARAAIASSSVVIDIIDVGG 220 Query: 201 GIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260 G E L + ++ Sbjct: 221 GFPSIYPGMEPPPLEDYFDVIFRASESLPISYSAELWCEPGRALCAEYSSLLAKVEKRRG 280 Query: 261 VDSSVEAHVPDYLLYQESATIYP---------NTGPYTAMVCGRSCLAGDIF-GEFHFEK 310 + + L + + G +C D G F Sbjct: 281 TELYINDGAYGALYDAAHLGWKFPVRALGHDEHAASEDFSLYGPTCDDADYMEGPFALPA 340 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI---REF 357 +K GD + + Y K FNG +A+ D ++ + R Sbjct: 341 DIKAGDYVEIGMLGAYGAAMKTDFNGFG-ANMAIVVGDDPMQTLYDGRRE 389 >gi|27370330|ref|NP_766463.1| antizyme inhibitor 2 [Mus musculus] gi|68564988|sp|Q8BVM4|ADC_MOUSE RecName: Full=Antizyme inhibitor 2; Short=AZI2; AltName: Full=Arginine decarboxylase-like protein; Short=ADC; Short=ARGDC gi|26346056|dbj|BAC36679.1| unnamed protein product [Mus musculus] gi|123248043|emb|CAM19110.1| arginine decarboxylase [Mus musculus] gi|148698276|gb|EDL30223.1| arginine decarboxylase [Mus musculus] gi|187951285|gb|AAI38974.1| Arginine decarboxylase [Mus musculus] gi|223460424|gb|AAI38975.1| Arginine decarboxylase [Mus musculus] Length = 459 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 114/352 (32%), Gaps = 32/352 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+ C ++ G+ L + G + ++ E+ L Sbjct: 41 FFVADLGAVVR--KHFCFLKHLPRVRPFYAVGCNSSLGVLKVLAELGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H K + + + +++ K K+ L I Sbjct: 99 VQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 159 QDSHSLNHLSLRFGASLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218 Query: 185 EF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 F + + LGGG + ++ F E V I E G Sbjct: 219 VFQMGEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEGCGVDILAELGR 278 Query: 236 AIVTNTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 VT+ T+ VLD + + S+ ++ + + ++ ++ NT P Sbjct: 279 YYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYYLDEGVYGVFNSVLFDNTCPTP 338 Query: 290 A--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 A + G + D E + +++GD + F+++ Y Sbjct: 339 ALQKKPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 390 >gi|209363877|ref|YP_001424127.2| ornithine decarboxylase [Coxiella burnetii Dugway 5J108-111] gi|207081810|gb|ABS77454.2| ornithine decarboxylase [Coxiella burnetii Dugway 5J108-111] Length = 400 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 107/350 (30%), Gaps = 22/350 (6%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77 Y G ++L A+K + ++ + +S E+ + E G + Sbjct: 32 RAVNYFCTQFGGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKEYAPGAELYF 91 Query: 78 NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136 I F+ K + K + F + Sbjct: 92 MHPVKSPHAIREAYFEYAVRHFSLDCLEELHKILRHTENAKDLCLHLRLAIPNTFAEFNL 151 Query: 137 NRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194 F + + ++ K G+ FH + + ++ +K +IE Sbjct: 152 AEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEIE 211 Query: 195 WISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246 ++GGG Y + K +Q+ EPG ++V +T++ Sbjct: 212 SFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVIV 271 Query: 247 TVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 V ++I + D+ + + L + T + P++ G +C + Sbjct: 272 NVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDSL 329 Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348 D G F+ +K GD I + Y FNG + + + + Sbjct: 330 DYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 379 >gi|311900080|dbj|BAJ32488.1| putative decarboxylase [Kitasatospora setae KM-6054] Length = 399 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 51/372 (13%), Positives = 113/372 (30%), Gaps = 40/372 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 D + T + GV + A+K + L G ++S E++ Sbjct: 28 YDLAGIARRYRTLRD--ELPGVAVRFAMKACPVDEVLAELAALGAGFDAASPNEIVQALR 85 Query: 69 -KFGGET-HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125 E H N D I ++++ + + A L + Sbjct: 86 TGTPPERVHYGNTVKSDRGIAEAHRLGIRDFATDSLADVAAIAEHAPGARVFCRLATSGE 145 Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAMLKNI 182 + + + GL H + + + +L + Sbjct: 146 GALWGLSRKY--GCSAADAVRVMAAARDAGLAPGGLSVHVGSQQLTAEAWAAAFDLLADA 203 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDY--------PVKDFCQRLKEFSEKYSV------Q 228 E +++ ++LGGG+ P+ D + +++ ++ + Sbjct: 204 MVELERDGIRLDHVNLGGGLPALGYADRYGTALAPPLDDIFRTVRQGLDRLRRLHGGDLR 263 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIK------NLVIVDSSVEAHVPDYLLYQES--AT 280 LEPG +V + + T V +++ + + + + + + Q Sbjct: 264 FVLEPGRHLVADQGAIRTHVYRLTDRQQPDGEREHWLYLGCGKFNGLYEMDQVQYRLVFP 323 Query: 281 IYPNTGPYTAMVCGRSCLAGDIF------GEFHFEKPVKIGDRISFEDVAGYNINRKNW- 333 +P+ A++ G +C + D F G + V GD + Y ++ Sbjct: 324 THPDEDRVPAVIAGPTCDSDDTFPHGGATGRVPVPRAVASGDPVWILSSGAYAVSYLTQG 383 Query: 334 FNGI-NMPTIAV 344 FNG +P + Sbjct: 384 FNGFDPLPYTVL 395 >gi|212219056|ref|YP_002305843.1| ornithine decarboxylase [Coxiella burnetii CbuK_Q154] gi|212013318|gb|ACJ20698.1| ornithine decarboxylase [Coxiella burnetii CbuK_Q154] Length = 400 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 107/350 (30%), Gaps = 22/350 (6%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77 Y G ++L A+K + ++ + +S E+ + E G + Sbjct: 32 RAVNYFCTQFGGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKESAPGAELYF 91 Query: 78 NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136 I F+ K + K + F + Sbjct: 92 MHPVKSPHAIREAYFEYAVRHFSLDCLEELHKILRHTENAKDLCLHLRLAIPNTFAEFNL 151 Query: 137 NRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194 F + + ++ K G+ FH + + ++ +K +IE Sbjct: 152 AEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEIE 211 Query: 195 WISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246 ++GGG Y + K +Q+ EPG ++V +T++ Sbjct: 212 SFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVIV 271 Query: 247 TVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 V ++I + D+ + + L + T + P++ G +C + Sbjct: 272 NVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDSL 329 Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348 D G F+ +K GD I + Y FNG + + + + Sbjct: 330 DYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 379 >gi|215919028|ref|NP_819750.2| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA 493] gi|206583913|gb|AAO90264.2| ornithine decarboxylase [Coxiella burnetii RSA 493] Length = 400 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 106/350 (30%), Gaps = 22/350 (6%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77 Y ++L A+K + ++ + +S E+ + E G + Sbjct: 32 RAVNYFCTQFDGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKEYAPGAELYF 91 Query: 78 NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136 I F+ K + K + F + Sbjct: 92 MHPVKSPHAIREAYFEYGVRHFSLDCLEELHKILRHTENAKDLCLHLRLAIPNTFAEFNL 151 Query: 137 NRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194 F + + ++ K G+ FH + + ++ +K +IE Sbjct: 152 AEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEIE 211 Query: 195 WISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246 ++GGG Y + K +Q+ EPG ++V +T++ Sbjct: 212 SFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVIV 271 Query: 247 TVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 V ++I + D+ + + L + T + P++ G +C + Sbjct: 272 NVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDSL 329 Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348 D G F+ +K GD I + Y FNG + + + + Sbjct: 330 DYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 379 >gi|94497588|ref|ZP_01304157.1| diaminopimelate/ornithine decarboxylase [Sphingomonas sp. SKA58] gi|94423005|gb|EAT08037.1| diaminopimelate/ornithine decarboxylase [Sphingomonas sp. SKA58] Length = 402 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 95/325 (29%), Gaps = 22/325 (6%) Query: 33 LLALKCFAAWGMFDTL-NQYMDGTTSSSLYEVML---GHEKFGGETHAYNV---AYKDCE 85 L A+K + + TL + +S+ EV L G + A + Sbjct: 44 LYAVKANPSPDLIRTLFASGITHFDVASIAEVRLVAEALAGQDGAKLCFMHPVKAEEAIA 103 Query: 86 IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGE 145 + T +T+ +L+K +A + L + VS L+ ++ + LGE Sbjct: 104 EAYHVHGVRTFSLDTIDELDKIM-RATGHATDLELCVRLRVSSEHAELSLASKFGAELGE 162 Query: 146 KCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH 203 ++ + + + + G+ FH + S +S ++ + ++ I +GGG Sbjct: 163 T-RELLMATRQAADALGICFHVGSQAMSPQAYSDAIERVRAAIVDAAVTVDIIDVGGGFP 221 Query: 204 FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS 263 + + E L+ + ++ + Sbjct: 222 SVYPGMEPVSLERYFDAIHRGFESLPISYSAELWCEPGRALSAEYSSVVVRVERRRGNEL 281 Query: 264 SVEAHVPDYLLYQESATIYPN----------TGPYTAMVCGRSCLAGDIF-GEFHFEKPV 312 + L G +C D G F V Sbjct: 282 YINDGAYGALFDAAHIGWRFPVELLREEASLESLEGFSFYGPTCDDMDHMVGPFMLPSDV 341 Query: 313 KIGDRISFEDVAGYNINRKNWFNGI 337 K GD I + Y + FNG Sbjct: 342 KAGDYIEIGMLGAYGAAMRTGFNGF 366 >gi|224535493|ref|ZP_03676032.1| hypothetical protein BACCELL_00356 [Bacteroides cellulosilyticus DSM 14838] gi|224522886|gb|EEF91991.1| hypothetical protein BACCELL_00356 [Bacteroides cellulosilyticus DSM 14838] Length = 285 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 92/272 (33%), Gaps = 22/272 (8%) Query: 91 SNCDTIIFNTVSQLNKFKDKAQKLHKKIGL--RINPSVSYSKFILADPNRPFSRLGEKCK 148 N ++ +L + A K + RINP+V ++ G + Sbjct: 5 YNIFCFNVESIPELEVINELAAAKGKIANISFRINPNVGAHTHANITTGLAENKFGISMQ 64 Query: 149 D-------KIESEIKNVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISL 198 D +E + GL FH + F+ + ++ + +IE I++ Sbjct: 65 DMGHVIEVALEMKNVKFIGLHFHIGSQILDMGDFVALCNRVNELQDKLEAHRIRIEHINV 124 Query: 199 GGGIHFTDKDYPVK-------DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 GGG+ K + F + + ++ E G AI +L + VL + Sbjct: 125 GGGLGIDYKHPNRQAIPDFKDYFSTYAEHLKLRSYQTLHFELGRAITGQCGSLISQVLYV 184 Query: 252 SENIKNLVIV-DSSVEAHVPDYLL--YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHF 308 + + D+ + + L Y + I V G C + D+FG+ Sbjct: 185 KQGANKKFAILDAGMTDLIRPALYQAYHKIENITSEDAVEAYDVVGPICESSDVFGKAID 244 Query: 309 EKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 VK GD I+ Y + +N +P Sbjct: 245 LNKVKRGDLIALRSAGAYGEIMASSYNCRELP 276 >gi|326933119|ref|XP_003212656.1| PREDICTED: arginine decarboxylase-like [Meleagris gallopavo] Length = 460 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 112/370 (30%), Gaps = 38/370 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ VK ++C ++ G+ L + G ++ E+ Sbjct: 41 FFVADLGDIVK--KHLRFLKALPRVKPYFPVRCNSSGGVMRLLAELGAGFACANKTEIAE 98 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y+ K A + F+ +L K + +G+ Sbjct: 99 VQSIGVPADKIFYSSPCKQVAHIKYAASHGVQLMTFDNEVELGKVARSHPQARMLLGIAA 158 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 +PS S ++ R + + + + V G+ FH + F+ + Sbjct: 159 DPSPSAHPSMMFGATLKSCR---RLLESAKEQDVEVVGISFHLGSHSLEPQVFAQAVAEA 215 Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEP 233 + F ++ + +GGG T+ + + F E V+I P Sbjct: 216 QLAFDMGTELGYRMHLLDIGGGFPGTEDTRAQFEEIAAVINSALDMYFPEGCGVEIVATP 275 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-------HVPD--------YLLYQES 278 G VT+ T ++ E D H+ D L Sbjct: 276 GRYYVTSAFTFAASITGKEEVPMEQPGSDGEESGSKRSLVYHLSDGIYGTFSCVLFDSPC 335 Query: 279 ATIYPNTGPYTAM------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + P + G A D ++ GD + F D+ Y I + Sbjct: 336 PKPLLHKKPCPEHPLCSSSLRGPLGHAEDQITNDVELPELQDGDWLIFRDMGAYTIATSS 395 Query: 333 WFNGINMPTI 342 G P + Sbjct: 396 LCGGCPRPHV 405 >gi|167760022|ref|ZP_02432149.1| hypothetical protein CLOSCI_02394 [Clostridium scindens ATCC 35704] gi|167662315|gb|EDS06445.1| hypothetical protein CLOSCI_02394 [Clostridium scindens ATCC 35704] Length = 416 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 59/405 (14%), Positives = 119/405 (29%), Gaps = 54/405 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ +L + I L A+K + L +D S E Sbjct: 14 ETPSYVFHIDELKKRIAMIREILGG-KASLCYAMKANPF--LVKPLKDVVDKYEVCSPGE 70 Query: 63 VMLGHEK-FGGETHAYNVAYKDCEIDAVLSNC----DTIIFNTVSQLNKFKDKAQKLHKK 117 + E + YK+ + A + T + S L + A K + Sbjct: 71 FGICETCQIPMERIVLSGVYKEEKDIAHVMCNYRDKGTYTIESASHLELLEQCACKEGIR 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 I I + + + + E N+ GL ++ + K Sbjct: 131 IRALIRV------TSGNQFGMDEAEICRIIERRNEYSHVNIIGLQHYSGTQKKKLAKIKK 184 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------KYSV 227 L+++++ + + E + G G + + + + + ++ Sbjct: 185 ELEHLDELITMLKESYGYEAEELEYGPGFYVPYFSTDEEADDEAMLKEFAGFLSELRFQG 244 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---DYLLYQESATIYPN 284 +I LE G + T ++D EN+ + H+ + + + Sbjct: 245 KITLEMGRYLAAYCGCYLTAIVDQKENMGQKYCIVDGGIHHLTYFGQAMAMKRPHYRQYH 304 Query: 285 TGP-------------------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 VCG C D+ + + KIGD + Sbjct: 305 EEEGRYEEVSVDKEQKGIKQEDFSQKDVTEWNVCGSLCTVNDVIVKNLPLQQAKIGDILV 364 Query: 320 FEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKA-IREFSYNDY 362 FE Y++ F ++P + + IK R S ++ Sbjct: 365 FERTGAYSVTEGMYLFLSRDLPQVLFYSKSEGIKVARRRRSTDEI 409 >gi|166030547|ref|ZP_02233376.1| hypothetical protein DORFOR_00208 [Dorea formicigenerans ATCC 27755] gi|166029709|gb|EDR48466.1| hypothetical protein DORFOR_00208 [Dorea formicigenerans ATCC 27755] Length = 408 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 62/395 (15%), Positives = 113/395 (28%), Gaps = 47/395 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP Y+ D L + + I ++ A+K + L D S E Sbjct: 14 ETPAYIFDLDMLKSRVRMMKTILGER-AEICFAMKANPF--LIGPLKDTADKFEVCSPGE 70 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNC----DTIIFNTVSQLNKFKDKAQKLHKK 117 + E + K+ + + L + A++ + Sbjct: 71 FHICETVGIPMERIVLSGVNKEKCDITHAMHTYGNAGVYTIESRKHLELLEMCAKEENIT 130 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 I I + + K + G+ ++ + K F Sbjct: 131 IHALIRV------TSGNQFGIDEEEVFDIVSKKDYYPHVRIEGIQCYSGTQKKKFSKIEK 184 Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSE-----KYSV 227 L ++ E + G G + ++ D L++F++ K+ Sbjct: 185 ELHWLDDILTRLKETCDYDAEVLEYGPGFYIPYFENEDEVDDESLLQQFADTLATLKFQG 244 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---DYLLYQESATIYPN 284 +I LE G I T ++D N + H+ + + + Sbjct: 245 KITLEMGRYIAAYCGYYVTRIVDQKINHGQNYCIVDGGLNHLNYYGQAMAMKMPHHKHIP 304 Query: 285 TGPYT-----------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 P +CG C D+ + K KIGD + FE V Y+ Sbjct: 305 DAPSEASDEQSEEQSEEQSEVLWNICGSLCTVNDVLVKQMPLKHAKIGDALVFERVGAYS 364 Query: 328 INRK-NWFNGINMPTIAVK-NVDGTIKAIR-EFSY 359 + F MP I DG +A + SY Sbjct: 365 VTEGIYLFLSRRMPRILFWSEKDGFTEARKATESY 399 >gi|302557780|ref|ZP_07310122.1| LOW QUALITY PROTEIN: lysine/ornithine decarboxylase [Streptomyces griseoflavus Tu4000] gi|302475398|gb|EFL38491.1| LOW QUALITY PROTEIN: lysine/ornithine decarboxylase [Streptomyces griseoflavus Tu4000] Length = 383 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/370 (12%), Positives = 98/370 (26%), Gaps = 41/370 (11%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 + D + D + GV + A+K + L G ++S E+ L Sbjct: 18 VYDLDGIAAQYDAL--AGELPGVGIRFAVKACPVPEVLARLAGRGAGFDAASPREIALAL 75 Query: 68 E-KFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y N D +I ++V + + A L + Sbjct: 76 ATGVPAGRIHYGNTVKSDRDIAEACRLGVRDFATDSVEDVAALGEHAPGARVFCRLATSG 135 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + +GL H + + + + + Sbjct: 136 EGALWGLSRKFGCSADDA--VRVLEAARDAGLVPSGLSVHVGSQQMTAEAWQRAFTALAE 193 Query: 185 EFGH---FITQIEWISLGGGIH--------FTDKDYPVKDFCQRLKEFSEK------YSV 227 + ++LGGG+ D P+ L+E E+ Sbjct: 194 VLTALHGRGIVPDHVNLGGGLPALGYTDRRGERLDPPLDKIFAVLREGMERLAGASSRPP 253 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDYLLYQESATI 281 +EPG +V + + V ++ + + + + + + Sbjct: 254 AFLVEPGRHLVADHGAIRAHVARLTTRRGPDGERERWLFLSCGKFNGLYEMDQVRYPLVF 313 Query: 282 YPNTGP-----YTAMVCGRSCLAGDIFG----EFHFEKPVKIGDRISFEDVAGYNINRKN 332 +V G +C + D + + + GD + Y + Sbjct: 314 PSRPDAAGSDLVPVVVAGPTCDSDDAYAHEHPRVRVPRALASGDPVWVLSAGAYAASYTT 373 Query: 333 -WFNGI-NMP 340 FNG +P Sbjct: 374 EGFNGFAPLP 383 >gi|90579305|ref|ZP_01235115.1| Orn/DAP/Arg decarboxylase, family 2 [Vibrio angustum S14] gi|90440138|gb|EAS65319.1| Orn/DAP/Arg decarboxylase, family 2 [Vibrio angustum S14] Length = 404 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 66/387 (17%), Positives = 131/387 (33%), Gaps = 31/387 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 YYL+D +K +N + L + K+ + K + ++ S E Sbjct: 17 YYLLDSKKFEDNFECLLDAFNSIYSNTKIGYSYKTNYIPKLCKIIDIKGGYAEVVSDMEY 76 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKA---QKLHKKI 118 L + E N YK I N + ++ ++ K+ A + Sbjct: 77 DLAIKLGVEPERIIVNGPYKPKNILEKFLLNKSIVNLDSFVEIEYLKEIALKNPTNMIEF 136 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 G+R N + + + L +K K+ E + G+ H + + Sbjct: 137 GIRCNFDIHNNVVSRFGIDINNPDLLKKLKEISEIKNVKFVGIHCHY-PDRNADSYSVRA 195 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFS------- 222 K IE F T ++I +GGG + K++ + Sbjct: 196 KKIIEVASSLFTTPPKYIDIGGGFFGKMDERLKKQFSSYHDYKEYANNIATEFKRAYSAL 255 Query: 223 -EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV----PDYLLYQE 277 ++ ++LEPG A+V +T V+DI + + S + ++ + + Sbjct: 256 PKEEQPILFLEPGSALVADTMKFVCRVIDIKNIRGTNIAMTSGSKFNIGLLSSTVNMPLD 315 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + Y N + G +C+ D + + + GD + F +V Y+I K F + Sbjct: 316 VHSKYINDKVNEYDISGFTCIESDYLFKGYT-GCLFQGDFLIFNNVGSYSIVFKPPFI-L 373 Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364 I + R+ + +D + Sbjct: 374 PNVPIIELTGNSVELIKRQETVDDIFE 400 >gi|197106780|ref|YP_002132157.1| ornithine decarboxylase [Phenylobacterium zucineum HLK1] gi|196480200|gb|ACG79728.1| ornithine decarboxylase [Phenylobacterium zucineum HLK1] Length = 423 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 94/350 (26%), Gaps = 23/350 (6%) Query: 20 TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVMLGHEKFGGETHAYN 78 A + + N + A+K + + +TL + +S+ E+ L G A+ Sbjct: 31 AARWFQDNFQGDVFYAVKANPSPWVIETLVKSGVNSFDVASVPEIELVSAHAPGARMAFM 90 Query: 79 VAYKDCE---IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILAD 135 K T +T +L K + A + L + VS + Sbjct: 91 HPVKSRRAIAQAYFDHGVKTFALDTHEELQKILE-ATGGADDLSLIVRLGVSAEGASYSL 149 Query: 136 PNRPFSRLGEKCKDKIES--EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193 + E + + ++ G+ FH + + A + + + Sbjct: 150 AGKFGVDAWEAPSLLLAARRATQDRMGVSFHVGSQCMRPTAYQAAMAQANRAIVRAGVLV 209 Query: 194 EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 + + +GGG D ++ E E L + Sbjct: 210 DVVDVGGGFPSVYPGMMPPDMADYTDSIHRGFAEMSVHEDTELWAEPGRGLVAEATSLLT 269 Query: 254 NIKNLVIVDSSVEAH----VPDYLLYQESATIYPNTGP-----------YTAMVCGRSCL 298 ++ + + D + + G G +C Sbjct: 270 KVELRKGDALYLNDGSYGSLFDAAHMKWPFPVKLYRGEGEAAHEVEGPLKPYRFYGPTCD 329 Query: 299 AGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 + D G F + ++ GD + + Y I FNG Sbjct: 330 SIDHMPGPFWLPEDIREGDYVEIGMLGAYGIAMSTRFNGFGDAETVAVGD 379 >gi|260752528|ref|YP_003225421.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551891|gb|ACV74837.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 393 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 91/349 (26%), Gaps = 22/349 (6%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVMLGHEKFGGETHAY 77 A + + K + A+K + + +L +S EV L T + Sbjct: 30 RAARFFIEKFAGKTMYAVKANPSPALIRSLWDAGITQYDVASANEVRLVRHLLPKATLCF 89 Query: 78 NVAYKD---CEIDAVLSNCDTIIFNTVSQLNKF---KDKAQKLHKKIGLRINPSVSYSKF 131 K + +L+K D A+ L + LR++ S K Sbjct: 90 MNPVKAEEVIREAYFEHGVRAFSLDNQDELDKILRATDYAKDLTLCVRLRVSSDHS--KL 147 Query: 132 ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT 191 LA + G+ FH + S + + Sbjct: 148 SLASKFGIDPAQSASLLMAARQASDAL-GICFHVGSQAMSPQAYIQAMALARDAIVQAGV 206 Query: 192 QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 ++ I +GGG D ++ E + E L+ + Sbjct: 207 TVDVIDVGGGFPSIYPDLEPQNLENYFHSIHEAFESLPISYSAELWAEPGRALSAEYSSL 266 Query: 252 SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG----------PYTAMVCGRSCLAGD 301 ++ D + L G +C D Sbjct: 267 IVRVERRRGTDLYINDGAYGALFDAAHLDWRFPVKLLRAESNQARDINFSFYGPTCDDMD 326 Query: 302 IF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 G F VK+GD I + Y + FNG P++ V D Sbjct: 327 YMAGPFPLPADVKVGDYIEIGMLGAYGNAMRTEFNGFT-PSMTVIADDQ 374 >gi|160885676|ref|ZP_02066679.1| hypothetical protein BACOVA_03680 [Bacteroides ovatus ATCC 8483] gi|156108489|gb|EDO10234.1| hypothetical protein BACOVA_03680 [Bacteroides ovatus ATCC 8483] Length = 408 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 55/385 (14%), Positives = 118/385 (30%), Gaps = 32/385 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +YL+D + NN + + + K +N+ S E+ Sbjct: 23 FYLLDSGQFRNNFIELKDTFRKIYPNFNIAYSYKTNYTPKFCKIVNELGGYAEVVSEMEL 82 Query: 64 MLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK---KI 118 + + +N +++ L T ++V +L K A++ + Sbjct: 83 EIALRVGVESKRIIWNGPIKNAKKLEEFLVAGGTDNIDSVEELAVVKAIAERHPDKVLNL 142 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 G+R N V + + + KNV+ + F + + +SA Sbjct: 143 GIRCNYDVQDGVVSRFGLDVDSEDFQQVLE--FVITTKNVHFINFQCHFAKRQIEYWSAR 200 Query: 179 LKNIEKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSEKYS-- 226 K + + E + +GGG+ F + + + + Y Sbjct: 201 AKGMVELIDRIGIIPERLDVGGGLFGKMADSLKAQFKNDIPDYQAYAEATATIFADYFAD 260 Query: 227 ----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 ++ +EPG A+V + TV I + + ++ + I Sbjct: 261 KNVKPELLIEPGSAVVGDCMKFVGTVKTIKCVRGKWMATVLGSQKNISMSGINPPMEVIT 320 Query: 283 PNTGPYTA---MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 G +C+ GD+ + + D I + Y++ K F N Sbjct: 321 MGGEQKEYKDLDFVGFTCIEGDVLYNNYN-GKLAHEDAIVISNCGSYSLVMKPPFILPNF 379 Query: 340 PTIAVKNVDGTIKAIRE-FSYNDYY 363 P + + I+ ++D + Sbjct: 380 P--VLDICGEKTEVIKRGEVFDDLF 402 >gi|148285661|gb|ABQ57527.1| LolD [Neotyphodium sp. PauTG-1] Length = 396 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 93/351 (26%), Gaps = 36/351 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ V A+K + TL G +S E+ L Sbjct: 33 FFVADLNDVVRKWAAWKEAL--PDVTPFFAVKSSYDRRLIQTLATCGAGFDCASTEEIEL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122 G E + K + I F+ +L K + + + Sbjct: 91 ILSLGIGAERIIFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHHHYPEAQTVLRVFA 150 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH----NNCENKSFLCFSAM 178 + + G ++ + G FH + +++ Sbjct: 151 DDPTNADPLGTKFGAARDDFDG--LVRLVKELNMQLAGASFHAAPSVAVDAAAYVRGIRD 208 Query: 179 LKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + + +GGG + K + ++I EPG Sbjct: 209 AAEVFARARQVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFKSEVGEGRLRILAEPG 268 Query: 235 EAIVTNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQE 277 + L V L I++ I + ++ V + +E Sbjct: 269 TLFSCSPFYLAVKVVARRVNATAFGHEPATRLYINDGIYSNFMMRFIVNMTFSPAAVIRE 328 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVA 324 + GRSC + D V++GD + F+D+ Sbjct: 329 GVWHDQADHTMRGEACSLWGRSCDSNDCINRDCRLGPEVRVGDWLVFKDMG 379 >gi|302875945|ref|YP_003844578.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulovorans 743B] gi|307686655|ref|ZP_07629101.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulovorans 743B] gi|302578802|gb|ADL52814.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulovorans 743B] Length = 485 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 65/444 (14%), Positives = 144/444 (32%), Gaps = 87/444 (19%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P +++ +K+ N+ N K+ A+K + G+ +N+ G SS E Sbjct: 41 PLHILFGKKIEENIMEFRNALNNNYTNSKICFAVKSSCSIGVLRIINKLGCGVDVSSYNE 100 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 + + +N K EI + D I ++V + + + ++ ++KK + Sbjct: 101 FKFAEIAEIPYDRMVFNGNCKTDEIIELAITKDILINVDSVYEFERILEISKNINKKAKV 160 Query: 121 RINPS---VSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCEN 169 I S V + + +++ G + + + +V G H + Sbjct: 161 LIRLSGLKVDKATDECIYTSGEWTKFGINYLEAKELLTNNSVYHQYIDVYGFQVHIGSQI 220 Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGG-------------------------- 200 + + ++ I +E H + I++GG Sbjct: 221 GYYEAYINAIEKIVKLSEELAHIGNFMRIINIGGGFPINYVDKVEWEQFQKSMAYKGEEN 280 Query: 201 -----------GIHFTDKDYPVKDFCQRLKEFSEKY------------------SVQIYL 231 + Y + + L++ Y ++ + Sbjct: 281 SNCFIWKNEKADYKVNELFYTDYEKSKMLEKVLNTYINYKDSSKKIKDVLKEIGEPELII 340 Query: 232 EPGEAIVTNTTTLNTTVLDISENI--------KNLVIVDSSVEAHVPDYLLYQESATIYP 283 EPG +IV + V I + V SV ++ + + + Sbjct: 341 EPGRSIVGDAGITIAKVNGIKKVNGNNLLVVEMGNVNYAGSVIHNLFNCWDLFKDYSNVD 400 Query: 284 NTGPYTAMVCGRSCLAGDIFGEFH--FEKPVKIGDRISFEDVAGYNIN--RKNWFNGINM 339 + ++A +CG C GD+ + F++ K G+ + DV G + + N + Sbjct: 401 SNEEFSAFICGNLCYNGDMISNYKIKFDREPKRGEYVITYDVGG-TESHFFASNANMNPI 459 Query: 340 PTIAVKNVDGTIKAIR-EFSYNDY 362 P+ + N I+ ++ + D Sbjct: 460 PSRLLINDKNDIEILKSRQTLEDL 483 >gi|297602100|ref|NP_001052100.2| Os04g0136500 [Oryza sativa Japonica Group] gi|255675146|dbj|BAF14014.2| Os04g0136500 [Oryza sativa Japonica Group] Length = 378 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 87/347 (25%), Gaps = 38/347 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++++D K+++ GV+ A+KC + L G +S E+ Sbjct: 52 FHVLDLAKVVDLYAGWRRAL--PGVRPFYAVKCNPDTALLGALAALGAGFDCASRAEIEA 109 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K A + + T + + L Sbjct: 110 VLALGVPPAAIVYANPCKPGAHVAFAAEAG-VNVTTYDSEEEVAKVKRCHPSCELLLRIK 168 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS-------FLCFSA 177 + + + K + + + Sbjct: 169 APDCGGVKVRPRPQVPRATRNKVLPLLRAAPPRGPRRGRRVVPRRQRRVPRGRLPRRHRG 228 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 + +++ G + + +++ GG R+ + + E Sbjct: 229 RARGVQRAAGLGMPPMRVLNIAGGFPGRYFAETAFTLAARVIGKRRR------GDVREYW 282 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA--MVCGR 295 + + S+ + D + + G T V G Sbjct: 283 IDDGVYG-------------------SLNCILLDSYVPRPRPLAGARPGEETHASTVFGP 323 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 +C + D + + + D + F+D+ Y + FNG I Sbjct: 324 TCDSIDTVVTGYQLPEMSVDDWLVFDDMGAYTTAAGSSFNGFATSAI 370 >gi|29830040|ref|NP_824674.1| lysine/ornithine decarboxylase [Streptomyces avermitilis MA-4680] gi|29607150|dbj|BAC71209.1| putative diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] Length = 485 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 104/354 (29%), Gaps = 34/354 (9%) Query: 24 IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFGGETHAY-NVAY 81 + V A+K + L + G +S E+ L E + A Sbjct: 87 VAPGTPVLHAFAVKATPLVPVLRLLGEAGIGAEVASPGELALAQAAGVAPERTVLDSPAK 146 Query: 82 KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIGLRINPSVSYSKFILADPNRP 139 E+ L+ + + +L++ + +G+R+NP V Sbjct: 147 TPAELREALALGIAVNADNPQELDRIDALVRSAPSGSPVGIRVNPQVGGGSIDALSTATA 206 Query: 140 FSRLGEKCKD--------KIESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFG 187 S+ G +D + ++ + L H+ + + + E+ Sbjct: 207 TSKFGVALRDEGAREWILRAYADRPWLTRLHAHSGSQGMPLSLMARGIAETYALAEEINR 266 Query: 188 HFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-------SVQIYLEPGEAIVT 239 H QI+ I +GGG+ R + + E G +++ Sbjct: 267 HVGRRQIDTIDIGGGLPVNFGSDATTPTYARYARLLAESVPGLFDGRYGLVTEFGRSLLA 326 Query: 240 NTTTLNTTVLDIS---------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290 T+ V + V + + A +P GP Sbjct: 327 KHGTVVARVEYAKSAGGRAVAVTHAGVQVATRTVYAPASWPLRITAYDAKGHPKAGPEVV 386 Query: 291 M-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 V G +C AGD+ ++ GD ++ D Y +N + P I Sbjct: 387 QDVAGPACFAGDLLAVGRALPLLEQGDHVAALDTGAYYFAHHYAYNSLARPGIY 440 >gi|33322394|gb|AAQ06922.1|AF496253_1 diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. lactis] Length = 119 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 4/103 (3%) Query: 267 AHVPDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 ++ L E + + + G+ C +GDI + + GD ++ Sbjct: 11 DNIRPALYQAEYSAVVADRPQAEDEERVNLXGKYCESGDILIKSCPLPKTEPGDVVALLS 70 Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 Y + + +N P + I+ SY+D N Sbjct: 71 TGAYGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAN 113 >gi|56551916|ref|YP_162755.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis ZM4] gi|56543490|gb|AAV89644.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis ZM4] Length = 393 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 93/349 (26%), Gaps = 22/349 (6%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVMLGHEKFGGETHAY 77 A + + K + A+K + + +L +S EV L T + Sbjct: 30 RAARFFIEKFAGKTMYAVKANPSPALIRSLWDAGITQYDVASANEVRLVRHLLPEATLCF 89 Query: 78 NVAYKD---CEIDAVLSNCDTIIFNTVSQLNKF---KDKAQKLHKKIGLRINPSVSYSKF 131 K + +L+K D A+ L + LR++ S K Sbjct: 90 MNPVKAEEVIREAYFEHGVRAFSLDNQDELDKILRATDYAKDLTLCVRLRVSSDHS--KL 147 Query: 132 ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT 191 LA ++ G+ FH + S + + Sbjct: 148 SLASKFGIDPAQSASLLMAARQASDSL-GICFHVGSQAMSPQAYIQAMALARDAIVQAGV 206 Query: 192 QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 ++ I +GGG D ++ E + E L+ + Sbjct: 207 TVDVIDVGGGFPSIYPDLEPQNLENYFHSIHEAFESLPISYSAELWAEPGRALSAEYSSL 266 Query: 252 SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG----------PYTAMVCGRSCLAGD 301 ++ D + L G +C D Sbjct: 267 IVRVERRRGTDLYINDGAYGALFDAAHLDWRFPVKLLRAESNQARDINFSFYGPTCDDMD 326 Query: 302 IF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 G F VK+GD I + Y + FNG MP++ V D Sbjct: 327 YMAGPFPLPADVKVGDYIEIGMLGAYGNAMRTEFNGF-MPSMTVIADDQ 374 >gi|163761098|ref|ZP_02168175.1| ornithine decarboxylase [Hoeflea phototrophica DFL-43] gi|162281649|gb|EDQ31943.1| ornithine decarboxylase [Hoeflea phototrophica DFL-43] Length = 417 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 100/364 (27%), Gaps = 36/364 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63 P Y L + + + + A+K + TL + +S E Sbjct: 30 PLYCFRPDVLKQDARQFMKLFPG---ETAYAVKTNGEPMVLKTLVEAGVKIFDVASPGEF 86 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH----KKIG 119 Y K + I ++ ++ + + Sbjct: 87 EAVRAASPDAEMLYMHPVKAQSDIRLALETYGIRVMSLDHEDEIAKVLRIVRALDLDPAS 146 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSA 177 + I + + + ++ F + ++ + GL FH + + + Sbjct: 147 ITIFVRLQTKGHAMYELSKKFGAAPGHAVELVQRLDRIGFKVGLCFHVGSQVEEPDSYEQ 206 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD--------------FCQRLKEFSE 223 LK+ + + + +GGG P + + + Sbjct: 207 ALKSADWVRNRAGVNLVGLDVGGGFPAVYGHDPNRKAKPMPPLEELMGDLRANIKEWAFD 266 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHV-PDYLLYQE 277 + + EPG +V +L VL + N + S + + Sbjct: 267 D--MPLVAEPGRVVVARAFSLIVRVLLRKGRRLYINDGIWASLSDSWTGKITLPARFIPD 324 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNW 333 A VCG +C + DI + V GD I + Y+++ + Sbjct: 325 PARKIRKGKAGTVVPFRVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTR 384 Query: 334 FNGI 337 FNG Sbjct: 385 FNGF 388 >gi|156341492|ref|XP_001620778.1| hypothetical protein NEMVEDRAFT_v1g147087 [Nematostella vectensis] gi|156206104|gb|EDO28678.1| predicted protein [Nematostella vectensis] Length = 251 Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 83/241 (34%), Gaps = 12/241 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D +K+ + ++ VK+ A+K + + +Q G + S Sbjct: 14 GSPLYVYDTEKISSQYHRIIHAFSKVKSVKINYAVKALSNINILKLFHQLGAGLDTVSEQ 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG E + EI+ V I + +S L F K + Sbjct: 74 EVQLGLTAGVAPENIIFTPNGVSLEEIEEVAKLGVQINIDNLSILELFGQK--HPEIPVC 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFL 173 +RINP V S+ G K +E+ ++NG+ H + Sbjct: 132 IRINPHVMAGGNSKISVGHIDSKFGISIYQVPHIKRIVENTGMHINGIHMHTGSDILDID 191 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 F + + F +++I G G K+ + ++L + K Q + Sbjct: 192 TFIRATEILFNVASQFN-TLDFIDFGSGFKVPYKEGDIATDIEQLGKQLTKRFNQFCKDY 250 Query: 234 G 234 G Sbjct: 251 G 251 >gi|147818133|emb|CAN69215.1| hypothetical protein VITISV_030355 [Vitis vinifera] Length = 391 Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 96/350 (27%), Gaps = 33/350 (9%) Query: 16 NNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGE 73 N + + + + V A+KC + L +S E+ G + Sbjct: 42 NRIASWDMWKQALPNVVPYYAVKCNCQPPLITALASLGANFDCASRAEIETVMALGVGAQ 101 Query: 74 THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFIL 133 A L I K + S L Sbjct: 102 QIV--SPIHTRFKAAHLDPKRIISTQLGMGRYK-----WYQSRSPTPVWGSLQKESWRSL 154 Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----F 189 + + V G+ FH + + + + F Sbjct: 155 GAKFGALPEEVVPLLQQASAAGLRVIGVSFHVGSKVNDPQVYRGAIASARGVFDAAAQLK 214 Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--------QIYLEPGEAIVTNT 241 + + + +GGG+ + + +KE + Y +I EP Sbjct: 215 LPPMHVLDIGGGL---QESPTFHEIAAVIKEATNDYFPSSETSEDLKIMAEPERLFAETA 271 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI---------YPNTGPYTAMV 292 TL + ++ + + Y +S+ + + N +++ V Sbjct: 272 FTLVSNIIGKRVRGEKREYWIDDGIYRSFNLPAYDKSSMMVKPLLGGSEWMNKAKFSSTV 331 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 G +C + D+ + + D + F ++ Y + FNG ++ +I Sbjct: 332 FGPTCDSTDMVVAESQLPELHMNDVLVFYNMGAYTASAGTRFNGFDISSI 381 >gi|262199172|ref|YP_003270381.1| Orn/DAP/Arg decarboxylase 2 [Haliangium ochraceum DSM 14365] gi|262082519|gb|ACY18488.1| Orn/DAP/Arg decarboxylase 2 [Haliangium ochraceum DSM 14365] Length = 486 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 69/410 (16%), Positives = 128/410 (31%), Gaps = 60/410 (14%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +++ L +NL + + + + ALK F + + L + G SL E Sbjct: 65 VHVVHADTLRSNLTRFSRLLSDTFARDTLVAWALKSFPVQAVVNELAKEQCGADVGSLQE 124 Query: 63 VMLGH-EKFGGETHAYNV-AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KI 118 + + G A E+ A++ T + + + + A + I Sbjct: 125 LRMALAAGIPGRDIICTGVAKSAQELRAIVDCGATCVLDNADEAAALESIAASAGRVVAI 184 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIESEIK----NVNGLMFHNNCENKS 171 G+R+NP V+ + S+ G +D + + V + H Sbjct: 185 GVRVNPEVATPTHAMIATGAIGSKFGVPIGAAEDFVAAVAAHAHLRVELVHMHIGAHFYH 244 Query: 172 FLCFSA----MLKNIEKEFGHFITQIEWISLGGGI-------------HFTDKDYPVKDF 214 S + H I + +GGG D+ + + Sbjct: 245 IDPESFARAINREAELVSALHRRYPIRRVDIGGGFRFPFLAPRQARQMGMDDERFHLVTQ 304 Query: 215 CQRLKEFS---------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--------- 256 L+ +Q+ EPG AIV + VL + E + Sbjct: 305 PDVLERTMAILSQRVIDMPSDIQVVAEPGTAIVCGASFSLGQVLAVRELARLDSPLDGRK 364 Query: 257 ----NLVIVDSSVEAHVP---DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF---GEF 306 ++ S+ E + LL Q + A V G C AGD+ G + Sbjct: 365 IGVGWVLGTASTAEFILRAGVPNLLNQTCIADKAEERDFAAGVGGPLCFAGDVLSPPGFY 424 Query: 307 HFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 + GD + + Y I F+ + +A+ DG ++ +R Sbjct: 425 LRMARPRPGDVLCLANTGAY-IGCGFNFHNLPRFAVALMERDGNLRTVRR 473 >gi|125564562|gb|EAZ09942.1| hypothetical protein OsI_32240 [Oryza sativa Indica Group] Length = 371 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 92/352 (26%), Gaps = 49/352 (13%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K+++ V+ A+KC M L G +S E+ Sbjct: 46 FHVFDLAKVVDLHRGWRRAL--PDVRPCYAVKCNPDGAMLAALAALGAGFDCASRAEIEA 103 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 T Y K + + T + + + L Sbjct: 104 VLALGVRPATIVYANPCKPEAHLEYAAEVG-VNLTTYDSEEEVAKVRRCHPRCELLLRI- 161 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 G+ D N + A + + Sbjct: 162 --------------KAPDSGDAKVDLGLKYGANPD----------------EAAREAFDA 191 Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEAIVTNTT 242 + + + +GGG + F + V++ EPG Sbjct: 192 AAALGMPPMRVLDIGGGFMAGRTFDEAAAVINRALERHFGDLPCVEVIGEPGRYFAETAF 251 Query: 243 TLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP-------YTA 290 TL V+ + S+ + D+ + + G + + Sbjct: 252 TLAARVIGKRTRGELREYWIDDGLYGSLNCILMDHYVPRPRPLAAAAAGEDTTAATTHAS 311 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 V G +C + D + + +GD + F+D+ Y + FNG I Sbjct: 312 TVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTAAGSNFNGFATSAI 363 >gi|87199811|ref|YP_497068.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM 12444] gi|87135492|gb|ABD26234.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM 12444] Length = 401 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 87/336 (25%), Gaps = 29/336 (8%) Query: 26 KNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNVAYKDC 84 + K L A+K + + L +S+ EV L T + K Sbjct: 37 EKFPGKSLYAVKANPSADLLRVLWDSGVTHYDVASIAEVRLVRATLPEATLCFMHPVKAP 96 Query: 85 ---EIDAVLSNCDTIIFNTVSQLNKF---KDKAQKLHKKIGLRINPSVSYSKFILADPNR 138 ++ +L K A+ L + LR++ S Sbjct: 97 AAIREAYEQHGVRVFSLDSFEELEKIKEACGFAEDLTLCVRLRVSSDYSELS-----LAS 151 Query: 139 PFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWI 196 F + +++ + + G+ FH ++ S + L+ + ++ I Sbjct: 152 KFGCDLTNAAELLQATRQAADSLGVCFHVGSQSMSPHAYVQALERVRAAIVDASVTVDII 211 Query: 197 SLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT----VLDIS 252 +GGG Y E L ++ + Sbjct: 212 DVGGGFPSIYPGMEPPPLEDYFGVIDRTYESLPISYSAELWCEPGRALCAEYNSMIVRVE 271 Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----------YTAMVCGRSCLAGDI 302 + ++ + D + G +C D Sbjct: 272 RRRGAELYINDGAYGALFDAAHVGWRFPVRVLREEVANDGVEIEMEPFSFYGPTCDDMDH 331 Query: 303 F-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 G F +K+GD I + Y K FNG Sbjct: 332 MEGPFELPADMKVGDYIEIGMLGAYGAAMKTAFNGF 367 >gi|149186768|ref|ZP_01865079.1| diaminopimelate/ornithine decarboxylase [Erythrobacter sp. SD-21] gi|148829676|gb|EDL48116.1| diaminopimelate/ornithine decarboxylase [Erythrobacter sp. SD-21] Length = 400 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 45/345 (13%), Positives = 84/345 (24%), Gaps = 25/345 (7%) Query: 26 KNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNVA-YKD 83 + K L A+K + + L +S+ EV + T + Sbjct: 37 EKFPGKSLYAVKANPSPDLVQILWDNGVTHYDVASIAEVRMVRSVLPDATLCFMHPVKSP 96 Query: 84 CEIDAVLSNCDTIIFNTVSQLNKFKDK----------AQKLHKKIGLRINPSVSYSKFIL 133 I F+ S K A L + LR++ + Sbjct: 97 GAIREAYFQHGVKTFSLDSSEELLKIVEATRGEDGEAATDLRLCVRLRVSSEHAALSLAS 156 Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193 + + ++ V FH + S + L I Sbjct: 157 KFGCDLTEAPALLQETRQYADWLGV---CFHVGSQAMSPFAYVQALDRTRAAIAEASVVI 213 Query: 194 EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT----VL 249 + I +GGG K + + E L V+ Sbjct: 214 DMIDVGGGFPSVYPGMEPPPLEDYFKIIHQHFYALPIAYNAELWCEPGRALCAEYSSLVV 273 Query: 250 DISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----NTGPYTAMVCGRSCLAGDIF- 303 + + + ++ + D + + G +C D Sbjct: 274 KVEKRRGEELYINDGAYGALFDAAHVEWKFPVRALEDDLIKPEMDFAFYGPTCDDADYMP 333 Query: 304 GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 G F + ++ GD I + Y K FNG + + Sbjct: 334 GPFGLPEDIQAGDYIEIGMLGAYGAAMKTDFNGFGAAERIIVTDE 378 >gi|255023266|ref|ZP_05295252.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-208] Length = 283 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 33/244 (13%), Positives = 79/244 (32%), Gaps = 22/244 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + + GVK + A K F+A ++ + + S Sbjct: 32 GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91 Query: 61 YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ F E ++ K + A+ + + +++ +D + ++K Sbjct: 92 GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151 Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165 + +R+ P + + S+ G + S ++ GL H Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211 Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220 + F + I + + + ++LGGG + + + + Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVCQ 271 Query: 221 FSEK 224 ++ Sbjct: 272 IMDE 275 >gi|297157946|gb|ADI07658.1| diaminopimelate decarboxylase [Streptomyces bingchenggensis BCW-1] Length = 447 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 103/363 (28%), Gaps = 43/363 (11%) Query: 24 IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY-NVAY 81 + V A+K + + L G +S E+ L E A Sbjct: 40 VAPGTPVLHAFAVKAASLVPVLRLLADEGIGCEVASPGELALARAAGVRAEHIVLDAPAK 99 Query: 82 KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL--------RINPSVSYSKFIL 133 E+ + + + +L + + + R+NP V Sbjct: 100 TTAELREAIELGIAVNADNPQELARLDALVRPRNGPGPALPPGPLGLRVNPQVGGGSIGA 159 Query: 134 ADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185 S+ G D E + L H + +A ++ + Sbjct: 160 LSTATATSKFGVALLDPGAREWVVNAFTRRPWLTRLHAHVGSQGCPLELMAAGVRAAYEL 219 Query: 186 FGHFIT-----QIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEKYS---VQIYLEP 233 QI+ + +GGG+ +D+ + L + + E Sbjct: 220 AEEINRAVGRQQIDTLDIGGGLPVNFGSDEITPGYRDYARLLLDTVPGLFDGRYGLVTEF 279 Query: 234 GEAIVTNTTTLNTTVLD------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---- 283 G +++ + T+ V I + ++ P+ + +A + Sbjct: 280 GRSLLAKSGTVLARVEYAKSAGGRPIAITHAGAQLATRTVFAPESWPLRVTAYDWEGVAK 339 Query: 284 ---NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 GP V G C AGD+ +K GD ++ D Y + +N + P Sbjct: 340 PTGPDGPVAQDVAGPCCFAGDLVAVDRPLPELKAGDLVALLDTGAYYFSNHFAYNSLPRP 399 Query: 341 TIA 343 I Sbjct: 400 GIY 402 >gi|91762667|ref|ZP_01264632.1| Lysine/ornithine decarboxylase [Candidatus Pelagibacter ubique HTCC1002] gi|91718469|gb|EAS85119.1| Lysine/ornithine decarboxylase [Candidatus Pelagibacter ubique HTCC1002] Length = 392 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 104/349 (29%), Gaps = 19/349 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P Y I K+ + + K+L A+K + + T+ + +S+ E+ Sbjct: 19 PIYCIRKKSIQSASTYFRNKFPG---KVLYAVKTNSHPEVLKTIVESGIENFDVASIQEI 75 Query: 64 MLGHEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 +Y I N + F+ ++ K K Sbjct: 76 KDIRAISPDAKCSYMHTVKSRESIKEAYFNYNIKAFSLDTKDELIKIIEATNQAKDLELF 135 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180 ++ D ++ F L + + + GL FH + + ++ Sbjct: 136 VRVAVSNEHAEIDLSKKFGVLTSEATGLLRLTKQYAKKIGLSFHVGSQCMHPISYAKGTG 195 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 I ++I++GGG + + +E + + + E + Sbjct: 196 EIGNIIKKTKIIPDYINIGGGFPAIYPNLVPQPLENYFEEIKKSLTNLELEKLPELLCEP 255 Query: 241 TTTLN----TTVLDISENIKNLVIVDSSVEAHVPDY----LLYQESATIYPNTGPYT--- 289 + +T++ ++ K + ++ + D ++Y Sbjct: 256 GRAIVAESGSTIVRVNLRKKQKLYINDGTYGTLFDAGTPNMVYPSRLIKSSKIISKKLTA 315 Query: 290 AMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 G +C + D G F +K D I + Y + + FNG Sbjct: 316 FDFYGPTCDSMDYMKGPFLLPNNIKENDYIELGQLGAYGLTFRTQFNGF 364 >gi|126740708|ref|ZP_01756394.1| Putative Ornithine decarboxylase [Roseobacter sp. SK209-2-6] gi|126718223|gb|EBA14939.1| Putative Ornithine decarboxylase [Roseobacter sp. SK209-2-6] Length = 383 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 109/358 (30%), Gaps = 23/358 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEV 63 P + L + + G + A+K + + + ++ +S E+ Sbjct: 23 PILYFSPRVLHHVAERFQAGF---GGLVTYAVKANPHPAVLSNLVAAGINAFDVASPAEM 79 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 YN + E D ++ K A K+I +R Sbjct: 80 EAVRTASAEAVMHYNNPMRSREEIDAGIKYDVASWSVDELSELEKLHAVPRSKEIAVRFA 139 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 VS D F + + ++ + L FH + + + + Sbjct: 140 LPVSG---AAYDFGSKFGAAPLEAVELLKRVAAEGWTPALCFHPGTQCEDEAAWVEYIHA 196 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDY--PVKDFCQRL----KEFSEKYSVQIYLEPGE 235 ++ I +++GGG ++ + +E Q+ EPG Sbjct: 197 AKRIVDAAGVPIARLNVGGGFAANRDGEAPDLERVFSAINLATQEAFGAQRPQLICEPGR 256 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATI-----YPNTGPY 288 A+V+ + TL + + + + + + D + D L + + Sbjct: 257 AMVSESFTLAARIKGMRKGGEVIFLNDGIYGGLVDIRDMGLPGRVEVVNADGQHRQGERR 316 Query: 289 TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 +V G +C + D + + GD + F + Y+ FNG + +A Sbjct: 317 PRVVFGPTCDSLDRLPDGLPLPEDTRTGDYVLFPGLGAYSSAMSTQFNGYGLSDVATV 374 >gi|300023366|ref|YP_003755977.1| Orn/DAP/Arg decarboxylase 2 [Hyphomicrobium denitrificans ATCC 51888] gi|299525187|gb|ADJ23656.1| Orn/DAP/Arg decarboxylase 2 [Hyphomicrobium denitrificans ATCC 51888] Length = 392 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 110/338 (32%), Gaps = 22/338 (6%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG---TTSSSLYEVMLGHEKFGGETH 75 A + N ++ A K ++ + L Y G +S+ E+ G H Sbjct: 30 RAARWFINNFPGEVAYAYKANSSVFLVGAL--YGAGITQFDVASVAELEDAATIPGVRLH 87 Query: 76 AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYS-KFILA 134 + I + D F + ++ + ++ L + +S K Sbjct: 88 FMHPVKSRYAIRRAYFDYDIKCFA-LDTEDELQKIVEETDGAKDLELFVRISVPAKNSRV 146 Query: 135 DPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ 192 F G+K + + + + G+ FH + + ++ + ++K Sbjct: 147 PLEHKFGITGQKAQRLLVKTRQVADELGITFHVGSQTTTPDAYAMAFEEVKKHIVKAGVV 206 Query: 193 IEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEKY----SVQIYLEPGEAIVTNTTTLN 245 ++ I +GGG D DF + +K +K ++ EPG A+V +L Sbjct: 207 VDAIDIGGGFPSRYTDSVPARLSDFIEVIKSSMDKMPVTEHCRLICEPGRALVAEAESLI 266 Query: 246 TTVLDISENIKNLVIVDSS----VEAHVPDYLLYQ-ESATIYPNTGPYTAMVCGRSCLAG 300 V + + AH+ + + PN + G +C + Sbjct: 267 VKVDLRKSGNQLFINDGGYGALFDSAHIGFVFPVRLIRPGLDPNEPLEPFELWGPTCDSI 326 Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 D G F V+ GD I ++ Y FNG Sbjct: 327 DRMKGPFMLPASVREGDYIEIGNIGAYGRALATRFNGY 364 >gi|145529756|ref|XP_001450661.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124418283|emb|CAK83264.1| unnamed protein product [Paramecium tetraurelia] Length = 888 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 113/362 (31%), Gaps = 33/362 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVM 64 + + + +L N +++ + A+K + + G +S E+ Sbjct: 503 FMIYNSNELKNKVNSWKQTL--PWITPYYAIKSNPIEPLIQDIINGPFGTFDCASKGEIQ 560 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + Y+ K+ + N +++ +L K + A ++ L Sbjct: 561 MVMKYGVPASKLVYSNPVKEEKDIYYAKNKGVQITSADSIDELIKIQKIAPEMKILWRLS 620 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNC---ENKSFLC 174 I L +I+ ++G+ FH + SF Sbjct: 621 IVEENPEQMATLFSGKFGDDVPNLDAAHKRFKQIQQMGIQLHGIHFHCGSAVQGSSSFGK 680 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + + + + ++E + +GGG + + K ++ Q+ EPG Sbjct: 681 AIDLAQECMRIGRLYGHKMELLDVGGGFPTGNIHENAIN--ALKKTQNDPLGYQVIAEPG 738 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------ 288 NT +L ++ L + H + +L + N Y Sbjct: 739 RHFSANTCSLLFRIMTKRIKHGRLCYHVNESLYHSFNCILMDGISFENQNDQFYGVLNSD 798 Query: 289 -----------TAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 + G +C DI + +++GD + + + Y + K+ FNG Sbjct: 799 ESQNSQISEQSNVSIFGMTCDGADIIAKNMVVPNDLQVGDWLCMQGMGSYTVGPKSTFNG 858 Query: 337 IN 338 + Sbjct: 859 MK 860 >gi|295840543|ref|ZP_06827476.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB74] gi|197696621|gb|EDY43554.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB74] Length = 396 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 56/390 (14%), Positives = 112/390 (28%), Gaps = 53/390 (13%) Query: 1 MIKTPY-----------YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLN 49 M TP + D + +R+ + A+K G+ L Sbjct: 1 MTSTPLSGPEGPGDHDRLVYDLDGVRARYAEL--LRELPSAAVRFAMKAAPEDGVLRALA 58 Query: 50 QYMDGTTSSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNK 106 G ++ E+ F E Y K A + ++ L Sbjct: 59 AVGAGVDAAGPQELRQALRAGFPVEKIHYGNTIKSDADIAEAYALGVRLFVTDSREDLAA 118 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFH 164 A + + + P E + E+ + GL H Sbjct: 119 LARHAPGARVFCRIAVEGGSALWGLKHKFGCAPD----EGVRLLREAAGLGLVPSGLSVH 174 Query: 165 NNCENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDK--------DYPVKD 213 + + + + + G ++ ++LGGG+ D P+ Sbjct: 175 VGSQQMDPDAWRDACERLAAVLESLGAAGITLDHVNLGGGLPARGYLNADGQPLDPPLDK 234 Query: 214 FCQRLKEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIK------NLVIV 261 L+E E+ + + +EPG +V + T+ V+ ++ + + + Sbjct: 235 IFATLREGVERLRSVHGGHLGVVMEPGRWLVADHGTIQARVVRLTRRHMPDGHVQHWLYL 294 Query: 262 DSSVEAHVP--DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF----HFEKPVKIG 315 + D L Y+ A+V G +C + D F ++ G Sbjct: 295 SCGKFNGLYEMDALQYRLRFPTASAAPRVPAVVAGPTCDSDDAFAHDRGHVRVPADLRSG 354 Query: 316 DRISFEDVAGYNINRKNW-FNGI-NMPTIA 343 D + Y ++ FNG +P + Sbjct: 355 DPVEILSCGAYALSYTTRGFNGFSPLPVVL 384 >gi|71082910|ref|YP_265629.1| lysine/ornithine decarboxylase [Candidatus Pelagibacter ubique HTCC1062] gi|71062023|gb|AAZ21026.1| Lysine/ornithine decarboxylase [Candidatus Pelagibacter ubique HTCC1062] Length = 392 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 105/349 (30%), Gaps = 19/349 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P Y I K+ + + K+L A+K + + T+ + +S+ E+ Sbjct: 19 PIYCIRKKSIQSASTYFRNKFPG---KVLYAVKTNSHPEVLKTIVESGIENFDVASIQEI 75 Query: 64 MLGHEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 +Y I N + F+ ++ K K Sbjct: 76 KDIRAISPDAKCSYMHTVKSRESIKEAYFNYNIKAFSLDTKDELIKIIEATNQAKDLELF 135 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180 ++ D ++ F L + + + GL FH + + ++ + Sbjct: 136 VRVAVSNEHAEIDLSKKFGVLTSEATGLLRLTKQYAKKIGLSFHVGSQCMHPISYAKGIG 195 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 I ++I++GGG + + +E + + + E + Sbjct: 196 EIGNIIKKTKIIPDYINIGGGFPAIYPNLVPQPLENYFEEIKKSLTNLELEKLPELLCEP 255 Query: 241 TTTLN----TTVLDISENIKNLVIVDSSVEAHVPDY----LLYQESATIYPNTGPYT--- 289 + +T++ ++ K + ++ + D ++Y Sbjct: 256 GRAIVAESGSTIVRVNLRKKQKLYINDGTYGTLFDAGTPNMVYPSRLIKSSKIISKKLTA 315 Query: 290 AMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 G +C + D G F +K D I + Y + + FNG Sbjct: 316 FDFYGPTCDSMDYMKGPFLLPNNIKENDYIELGQLGAYGLTFRTQFNGF 364 >gi|241761768|ref|ZP_04759854.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373682|gb|EER63242.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 393 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 92/349 (26%), Gaps = 22/349 (6%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVMLGHEKFGGETHAY 77 A + + K + A+K + + +L +S EV L T + Sbjct: 30 RAARFFIEKFAGKTMYAVKANPSPALIRSLWDAGITQYDVASANEVRLVRHLLPEATLCF 89 Query: 78 NVAYKD---CEIDAVLSNCDTIIFNTVSQLNKF---KDKAQKLHKKIGLRINPSVSYSKF 131 K + +L+K D A+ L + LR++ S K Sbjct: 90 MNPVKAEEVIREAYFEHGVRAFSLDNQDELDKILRATDYAKDLTLCVRLRVSSDHS--KL 147 Query: 132 ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT 191 LA ++ G+ FH + S + + Sbjct: 148 SLASKFGIDPAQSASLLMAARQASDSL-GICFHVGSQAMSPQAYIQAMALARDAIVQAGV 206 Query: 192 QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 ++ I +GGG D ++ E + E L+ + Sbjct: 207 TVDVIDVGGGFPSIYPDLEPQNLENYFHSIHEAFESLPISYSAELWAEPGRALSAEYSSL 266 Query: 252 SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG----------PYTAMVCGRSCLAGD 301 ++ D + L G +C D Sbjct: 267 IVRVERRRGTDLYINDGAYGALFDAAHLDWRFPVKLLRAESNQARDINFSFYGPTCDDMD 326 Query: 302 IF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 G F VK+GD I + Y + FNG P++ V D Sbjct: 327 YMAGPFPLPADVKVGDYIEIGMLGAYGNAMRTEFNGFT-PSMTVIADDQ 374 >gi|294937194|ref|XP_002782005.1| Ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983] gi|239893218|gb|EER13800.1| Ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983] Length = 460 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 48/414 (11%), Positives = 105/414 (25%), Gaps = 84/414 (20%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 L+D +L + + + A+KC + TL +++ E+ L Sbjct: 47 LLDLDQLERQMKKWKELLPR--IIPYYAMKCNPEPMLVKTLYHLGCRFDCATINEMKLVK 104 Query: 68 ---------------EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 ++ Y I A + I+ ++ ++ K Sbjct: 105 SILSENMGGSNAHIIDEMMASHIVYANPNKLPSHLIGARDLGVECIVADSAFEIAKIAHY 164 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + L + + + ++ + NV G+ FH Sbjct: 165 HPTAKLLLRLACVDNNAQCPMSSKFGASLGVAVNVLLEEAVN-HGLNVVGVSFHVGSGCS 223 Query: 171 SFLCFSAMLKNIEKEFG----HFITQIEWISLGGGI--------HFTDKDYPVKDFCQRL 218 + L + + F + ++ + +GGG K Sbjct: 224 DVHSITKALVDAREVFDAAASRYGMKLSILDIGGGFQGVDREGSPLNFKSMATVVNSLLD 283 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ-- 276 F + V++ EPG + L T + + + + + + D Sbjct: 284 TLFPDPDEVRVIAEPGRFFACSPCALLTKIYSKNVVVSAAKLPEVKSCGGISDEDTMDGG 343 Query: 277 -----------------------------------ESATIYPNTGPY------------- 288 + Y Sbjct: 344 SSSSASVDEGGAKNLSSLTRLYLNDGVYGSFNCILFDHQVVWPEALYAETEIRGIASVTN 403 Query: 289 -TAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T ++ G +C D + ++IGD + + ++ Y FNG + P Sbjct: 404 PTQVLFGPTCDGFDTIMQGVTHLPEMEIGDHLLWRNMGAYTTAAATNFNGFDTP 457 >gi|254467051|ref|ZP_05080462.1| ornithine decarboxylase, putative [Rhodobacterales bacterium Y4I] gi|206687959|gb|EDZ48441.1| ornithine decarboxylase, putative [Rhodobacterales bacterium Y4I] Length = 383 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 104/358 (29%), Gaps = 23/358 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEV 63 P + L + A+K + + + + +S E+ Sbjct: 23 PILYFSPRVLHEVARRFSQGFPG---LVTYAVKANPHPAVLSNLVAAGITAFDVASPAEM 79 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 YN + A + + +S+L K + + Sbjct: 80 EAVRAASPDAVMHYNNPMRSEAEIATGIEHGVASWSVDELSELEKLDAVPRSCEVAVRFA 139 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + F P + + + + FH + + + + + Sbjct: 140 LPVAGAAYDFGSKFGAAPEEAVELLKQVAAKGWTPAL---CFHPGTQCEDEMAWVEYVHA 196 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEFSEK----YSVQIYLEPGE 235 ++ +I +++GGG ++ + +++ + EPG Sbjct: 197 AKRIVDAAGVRIARLNVGGGFAANRDGVAPDLEKVFAAIGTAADQAFGAEKPTLICEPGR 256 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATIYPNTG-----PY 288 A+V+ + TL + + ++ + + D + D L + + Sbjct: 257 AMVSESFTLAARIKGMRKDGAVVFLNDGIYGGLVDIRDMGLPGRVEVVGSDGTHRSGVRK 316 Query: 289 TAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 +V G +C + D + GD + F + Y+ FNG + +A Sbjct: 317 PRVVFGPTCDSLDRLPDGLPLPCDCVAGDYVLFPGLGAYSSAMSTQFNGYGLSDVATV 374 >gi|302517374|ref|ZP_07269716.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB78] gi|302426269|gb|EFK98084.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB78] Length = 396 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 53/372 (14%), Positives = 110/372 (29%), Gaps = 42/372 (11%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66 + D + R+ + A+K G+ L G ++ E+ Sbjct: 19 VYDLDGIRARYAEL--CRELPSAAVRFAMKAAPDDGVLRALAAVGAGVDAAGPQELRQAL 76 Query: 67 HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 F E+ Y K A + ++ L A + + Sbjct: 77 RAGFPVESVHYGNTIKSDADIAEAYALGVRLFVTDSREDLAALARHAPGARVFCRIAVEG 136 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNI 182 + P E + E+ + GL H + + + + Sbjct: 137 GSALWGLKHKFGCAPD----EGVRLLREAAGLGLVPSGLSVHVGSQQMDPDAWREACERL 192 Query: 183 E---KEFGHFITQIEWISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKY------ 225 + G ++ ++LGGG+ D P+ L+E E+ Sbjct: 193 AAVLEALGEAGITLDHVNLGGGLPARGYLSAEGEPLDPPLDKIFATLREGVERLRAVHGG 252 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIK------NLVIVDSSVEAHVP--DYLLYQE 277 + + +EPG +V + T++ V+ ++ + + + + D L Y+ Sbjct: 253 HLDVVMEPGRWLVADHGTIHARVVRLTRRRMPDGVLQHWLYLSCGKFNGLYEMDALQYRL 312 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEF----HFEKPVKIGDRISFEDVAGYNINRKNW 333 A+V G +C + D F ++ GD + Y ++ Sbjct: 313 RFPTRSAAPRVPAVVAGPTCDSDDAFAHDRGHVRVPADLRSGDPVEILSCGAYALSYTTR 372 Query: 334 -FNGI-NMPTIA 343 FNG +P + Sbjct: 373 GFNGFSPLPVVL 384 >gi|197295061|ref|YP_002153602.1| putative pyridoxal-dependent decarboxylase [Burkholderia cenocepacia J2315] gi|195944540|emb|CAR57143.1| putative pyridoxal-dependent decarboxylase [Burkholderia cenocepacia J2315] Length = 391 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 54/378 (14%), Positives = 111/378 (29%), Gaps = 40/378 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60 ++TP Y+ + + + + G +L+++LK M + Y DG +S Sbjct: 19 LRTPCYVYEPEVAIARYRSLK---ARLGTRLIVSLKANPNQDMLARCAHAYEDGVELASR 75 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------ 114 E+ + + N + + + A L++ + + + +F A++ Sbjct: 76 GELDAVIGRIKTARYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAAAGGST 135 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCEN-- 169 + LR+N A + F + D + + V GL + + Sbjct: 136 PGAVLLRVNAGALAGVHARAQWHDHFGMTPNEAHDAVRTLAAAGLPVAGLHVFSGPHSFI 195 Query: 170 -------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEF 221 + + + + +SLGGG + + L Sbjct: 196 RQDPTQPDTLVLPERLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFERYAAALAPL 255 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VP 270 + +Y + E G AI + T V+ + + V +H Sbjct: 256 AGRY--SLAHESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMRR 313 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY--NI 328 P + + G +C D+ G P ++GD FE Y Sbjct: 314 LAAPSLVRRMPAPPSRGVPTLYVGSTCSRADVIGRDDAGAPPQVGDIAVFERCGAYHRTY 373 Query: 329 NRKNWFNGINMPTIAVKN 346 + F Sbjct: 374 SMA-HFLSHE-AAHVYVR 389 >gi|218263199|ref|ZP_03477397.1| hypothetical protein PRABACTJOHN_03080 [Parabacteroides johnsonii DSM 18315] gi|218222875|gb|EEC95525.1| hypothetical protein PRABACTJOHN_03080 [Parabacteroides johnsonii DSM 18315] Length = 240 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 56/187 (29%), Gaps = 12/187 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++TP+Y D + L L+ G A+K A + + +Y G S Sbjct: 37 LETPFYFYDIKLLKETLNMVKTEAGKYGYHAHYAVKANANPRILSVIAEYGLGADCVSGG 96 Query: 62 EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDK--AQKLHK 116 E+ F Y K + + D FN + ++L + A+ Sbjct: 97 EIQAALDAGFPACKIVYAGVGKADWEINLGLDNDIFCFNVESAAELEILDELAAAKNKVA 156 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169 I LRINP V ++ G E + G+ H + Sbjct: 157 PIALRINPEVDAHTHAKITTGMKENKFGINLSQLGQVLDLVSHLEHIKLIGIHCHIGSQI 216 Query: 170 KSFLCFS 176 F Sbjct: 217 TDMAAFR 223 >gi|328542930|ref|YP_004303039.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [polymorphum gilvum SL003B-26A1] gi|326412676|gb|ADZ69739.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Polymorphum gilvum SL003B-26A1] Length = 406 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 101/362 (27%), Gaps = 32/362 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEV 63 P Y + L + + K A+K + TL Q D +S E Sbjct: 19 PVYCFRPKVLAEDARRFAGLFPG---KTAYAVKTNGEPFVLATLAQAGIDCFDVASPAEF 75 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119 Y K T+ + ++ K + L G Sbjct: 76 AAVRGVAPSAEMLYMHPVKAQSHIRLALETYRIRTLSLDHEDEVAKILRVVRALDIDPGD 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSA 177 + + ++ + ++ F + ++ + GL FH + + + Sbjct: 136 ITLFVRIATKGQAAYELSKKFGAAPAHAVELLQRIDRIGFRCGLCFHVGSQIEDPQTYER 195 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF---------CQRLKEFSEKYSVQ 228 L + + I + +GGG P + +L++ + Sbjct: 196 ALASADWIRSRAGVPIVALDVGGGFPAVYGHDPRRRTPEMPSLEELMAQLRQDISDWGFD 255 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP- 287 E + V+ + + ++ + A + D + + P Sbjct: 256 TLPLVAEPGRVIVARSISLVVRVLLKKGRRLYINDGIWASLSDSWTGKITLPARFIPDPA 315 Query: 288 -----------YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFN 335 VCG +C + DI + V GD I + Y+++ + FN Sbjct: 316 RKRRAGNPDEIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTHFN 375 Query: 336 GI 337 G Sbjct: 376 GF 377 >gi|110634377|ref|YP_674585.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium sp. BNC1] gi|110285361|gb|ABG63420.1| Orn/DAP/Arg decarboxylase 2 [Chelativorans sp. BNC1] Length = 406 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 101/361 (27%), Gaps = 32/361 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64 Y + L + + + K A+K + TL + +S E Sbjct: 20 VYCFRPEVLKADARGFMGLFPG---KTAYAVKTNGEPLVLKTLAEAGVTAFDVASPAEFA 76 Query: 65 LGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-L 120 Y A D + I + ++ K + L G L Sbjct: 77 AVRAVAPSAEMLYMHPVKAQADIRLALEGYGIRKIAVDHEDEVTKLTRVVRALDIDPGRL 136 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSAM 178 + + + ++ F + ++ +N G+ FH + + + Sbjct: 137 TVFVRIQTKGQATYELSKKFGAGPAQAVQLLQRLHRNGYKVGICFHVGSQIEEPYVYERA 196 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---------LKEFSEKYSVQI 229 L + + G + + +GGG P + + ++ ++ Sbjct: 197 LASADWVRGRAGVPLAALDIGGGFPAEYGHDPNRRKSEMPSLEELMARVRADIAEWGFDT 256 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-- 287 E + ++ + + ++ + A + D + + P Sbjct: 257 LPLVAEPGRVIVARAFSLIVRVLLRKGRRLYINDGIWASLSDSWTGKITLPARFIPDPAI 316 Query: 288 ----------YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336 VCG +C + DI + V GD I + Y++ + FNG Sbjct: 317 RSRSGSAENIVPFRVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSMALRTRFNG 376 Query: 337 I 337 Sbjct: 377 F 377 >gi|118101782|ref|XP_425787.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 458 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 111/360 (30%), Gaps = 38/360 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ VK +KC ++ G+ L + G ++ E+ Sbjct: 39 FFVADLGDIVK--KHLHFLKALPRVKPYFPVKCNSSGGVIRLLAELGAGFACANKTEIAE 96 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y+ K + F+ + +L+K + +G+ Sbjct: 97 VQSIGVPADKIFYSSPCKXXXXXXXXXXXXVQLMTFDNLVELSKVARSHPQARMLLGIAA 156 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + S S + R + + + V G+ FH + F+ + Sbjct: 157 DSSPSAHPSMTFGATLKSCR---CLLESAKEQDVEVVGISFHLGRHSLEPQVFAQAVAEA 213 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEP 233 + F ++ + +GGG T+ + + F E V+I P Sbjct: 214 QLAFDMGAELGYRMHLLDIGGGFPGTEDTRAQFEEIAAVINSALDMYFPEGCGVEIIATP 273 Query: 234 GEAIVTNTTTLNTTVLDISE---------------NIKNLVIVDSSVEAHVPDYLLYQES 278 G VT+ T ++ + + + + + L Sbjct: 274 GRYYVTSAFTFAASITSKEDVPVEQPGSDGEESGSKRSFVYHLSNGIYGTFSCVLFDGPC 333 Query: 279 ATIYPNTGPYTAMV------CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + P + + G A D + ++ GD + F+D+ Y+I + Sbjct: 334 PKPLLHKKPCSEQLLCSSSLRGPLGHAEDQITDDVELPELQDGDWLIFQDMGAYSIATSS 393 >gi|159475475|ref|XP_001695844.1| arginine/ornithine decarboxylase [Chlamydomonas reinhardtii] gi|158275404|gb|EDP01181.1| arginine/ornithine decarboxylase [Chlamydomonas reinhardtii] Length = 391 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 42/369 (11%), Positives = 88/369 (23%), Gaps = 47/369 (12%) Query: 22 LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY-NV 79 G A+K + + + G +S E+ F + + + Sbjct: 6 QRAPFPPGTLHAFAIKANPVGRLLQIMREAGLGAEVASHGELRQALACGFVPDRVVFDSP 65 Query: 80 AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP---SVSYSKFILADP 136 E+ L + + + +L++ R V Sbjct: 66 IKTPAELRFALRAGVRLNLDNLQELDRLDKTVCFKCSPAPCRSRCAGPQVGEGSIAALST 125 Query: 137 NRPFSRLGEKCKD------KIESEIKNVNGLMFHNNC-----ENKSFLCFSAMLKNIEKE 185 S+ G + +N L H E + E++ Sbjct: 126 AGRVSKFGIPLLECRAQLLAAFRAHPWLNALHLHVGSQGVPLELTVEGVAAVAALAAEQQ 185 Query: 186 FGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEF---SEKYSVQIYLEPGEAIVT 239 ++ + +GGG+ + + L++ + + E G +V Sbjct: 186 EQRRRRRVLALDIGGGLPVMYGTDDLSVFDRYARLLQQRVPSLFPTATTLVTEFGRCLVA 245 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY----------- 288 V + V+V + + + + Sbjct: 246 KAAFAAGRVEYTKQCGGRRVVVSGLGGDLLLRAVYLPHTWPVRVELCDAAGQPKQPPARG 305 Query: 289 --------------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 V G C GD E GD + DV Y ++ + + Sbjct: 306 GAAYGGGGDDGDVAPTDVVGPLCFQGDKLAEAAPLPAAAPGDWVLVPDVGAYTLSMHSRY 365 Query: 335 NGINMPTIA 343 N P + Sbjct: 366 NSRCSPPVW 374 >gi|40063551|gb|AAR38340.1| decarboxylase, pyridoxal-dependent [uncultured marine bacterium 582] Length = 375 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 102/358 (28%), Gaps = 21/358 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63 P + L + + A+K A+ + D L +S E+ Sbjct: 23 PVLYFSPKVLHESYQRF---LLGFDGLVTYAVKANASSLVLDNLASAGLTTFDVASPAEM 79 Query: 64 MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 Y+ + +A + ++ ++L+K A + L Sbjct: 80 QTVRAALPSAVLHYHNPVRSLIEIAEAKRFGVQSWAVDSQTELDKLGALATGTEIAVRLH 139 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I + + F P + + K ++ FH + + ++ Sbjct: 140 IPVAGAAYDFGEKFGAGPEQVVALLRRVKQRGLTPSLT---FHPGTQCTDPAAWVRYIEV 196 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQIYLEPGE 235 +E +++GGG +K + S + EPG Sbjct: 197 AHAVSQRAEVDLERVNVGGGFAVWRDRQAPDLERVFTQISDCVKALFGEKSPALVCEPGR 256 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYPNTG----PYTA 290 A+V + TL T + + + + D + Q + Sbjct: 257 AMVASAFTLATQIKALRGLRTVFLNDGVYGLLSEFRDLGVSQRYQAWRAGSKLAGPSAAY 316 Query: 291 MVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 V G +C + D ++ GD + F ++ Y+++ FNG I Sbjct: 317 TVFGPTCDSIDKLPSPLHLPKSIQEGDYLLFSEIGAYSLSLATAFNGYGGCEIVAVTD 374 >gi|57242753|ref|NP_001008729.1| ornithine decarboxylase antizyme inhibitor [Gallus gallus] Length = 450 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 55/373 (14%), Positives = 115/373 (30%), Gaps = 33/373 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D KL+ + +K ++C + G+ + L G SS E+ L Sbjct: 40 FYVGDLGKLVKKNIQWQNVMAP--IKPFYTVRCNSTPGVLEILGTLGIGFACSSKSEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K + I S + K + K+ L I Sbjct: 98 VQGLGISPENIIYTNPCKQASQIKYAAKAGINIMTCDSDIELKKIARNHPNAKLLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + + G+ FH + K + + + Sbjct: 158 EDITADEEMNMKFGTTLKNCRHLMECAKEFGVQIVGVKFHVSGSCKELQTYIHAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 F F ++ + +GGG ++ ++ F ++ +Q+ EPG V Sbjct: 218 VFDMAEEFGFKMNMLDIGGGFTGSELQLEEVNHVIRPLLDVYFPKESGIQVIAEPGCYYV 277 Query: 239 TNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLY-------------------- 275 ++ TL V+ + + V+ + P + Y Sbjct: 278 SSAFTLAVNVIAKKAVDCDKLLPSGVEQARNDDEPVFTYYINDGVYGSFASKLSEKLYTN 337 Query: 276 -QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + + + + G SC D E + +GD + F+++ + ++ F Sbjct: 338 PEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELSVGDWLIFDNMGSGTLGEQSTF 397 Query: 335 NGINMPTIAVKNV 347 N P I Sbjct: 398 NDYQRPLIYYMMS 410 >gi|223648116|gb|ACN10816.1| Antizyme inhibitor 1 [Salmo salar] Length = 449 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 50/380 (13%), Positives = 116/380 (30%), Gaps = 36/380 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D L+ + A++ ++ + + L G +S YE+ L Sbjct: 40 FFVADLGVLMRQHVRWRTHMPQM--RPFYAVQANSSLAVIEILAALGTGFICTSKYELEL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E Y+ K A + D ++ + ++L K K+ L++ Sbjct: 98 VQGYGVPSEDIIYSGVCKQLSQIKYAAKNGIDFLVCDNEAELRKIAR--CHPRAKLLLQV 155 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 S + + + + + V G+ FH +S + + Sbjct: 156 ATEASSEGDEMGMAFGSKLKDCRHLLESAKEQGLQVVGVRFHIPSSCDDPQAYSHAVSDA 215 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYL-EPGEA 236 F + + +GGG + ++ + L + S + EPG Sbjct: 216 RCVFDMGEDIGFSMTLLDIGGGFNGSETQLKQINSAVRPLLDLYFPASSGVSIMAEPGSY 275 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------VPDYLLYQESATIYPNTGPY 288 V+++ TL ++ ++L + + D + ++ + N P Sbjct: 276 YVSSSFTLAVNIIAKEVGARDLHGNHDEPSPNDEPEFLYYMNDGVYGSFTSKLADNVIPA 335 Query: 289 TA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 A + G S D + + +GD + F + Y++ + F Sbjct: 336 PALPKSGVSEDPVFASSLWGPSGDELDQVVDQCLLPELSVGDWLIFNNAGAYSLGPPSTF 395 Query: 335 NGINMPTIAV-KNVDGTIKA 353 P + + + Sbjct: 396 TESPRPPVYYTISTGDWFEM 415 >gi|160941972|ref|ZP_02089294.1| hypothetical protein CLOBOL_06863 [Clostridium bolteae ATCC BAA-613] gi|158435113|gb|EDP12880.1| hypothetical protein CLOBOL_06863 [Clostridium bolteae ATCC BAA-613] Length = 410 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 53/381 (13%), Positives = 115/381 (30%), Gaps = 37/381 (9%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ D ++ + I V + A+K G S E Sbjct: 15 TPCYIFDLDVFISRIRRMEQILGK-QVNIYYAMKANPFLTAAAAQAAG--GLEVCSPGEY 71 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLS---NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + + K+ + T +++QL + A + Sbjct: 72 AICRRARVPAQKIVLSGVNKEESHIRSVMAEQGAGTYTAESLNQLRLLEACAGAAGRTGV 131 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + S ++F + + +++ ++ GL +++ + K L Sbjct: 132 RVLLRLTSGNQFGMD-----EEDILTSIRNRDSYPHLDLAGLQYYSGTQKKGMEKIEKEL 186 Query: 180 ----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------YSVQI 229 ++ H + + G G + + + L + +K + I Sbjct: 187 VKLDSFMDFVREHLDFEFRELEYGPGFQIPYFEGQEQADEEILLQEFKKALDSLNFKGII 246 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLYQESATI 281 +LE G + + T V D+ + + HV Y+ Sbjct: 247 FLEAGRFLAAPCGSYLTRVADVKRSQGQNYCIVDGGINHVNYYGQTMAMKVPAYRYIPQD 306 Query: 282 YPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWF 334 P P + VCG C +GDI + + GD + F+ + Y++ F Sbjct: 307 NPARPPASQTSGDRWTVCGSLCTSGDILVKNLPLDGLMTGDLLVFDRIGAYSVTEGIYLF 366 Query: 335 NGINMPTIAVKNVDGTIKAIR 355 +P + + + +R Sbjct: 367 LSRKLPVVLTCTQEHGLSLVR 387 >gi|323451542|gb|EGB07419.1| hypothetical protein AURANDRAFT_27655 [Aureococcus anophagefferens] Length = 565 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 99/382 (25%), Gaps = 50/382 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D D V+ A+KCF G+ L G +S E Sbjct: 143 PFYVVDVGAAERLYDAWAAALPR--VRPHYAVKCFPDAGLCRALAAKGCGFDCASEAECR 200 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 L D + + T ++ A L + Sbjct: 201 LVFACGATPRDVVFANPCKRPSDVNFLAASGVPWTTFDCCDELAKLAGLLPGATRAVLRL 260 Query: 125 SVSYSKFILADPNRPFSRLGE--KCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 L + + E + V G+ FH +S F+A + Sbjct: 261 RCDDPTSRLPFGPKYGALEDEVPGLLAAARAAGVAVAGVSFHVGSGARSPAAFAAAIAAA 320 Query: 183 EKEFGHF----ITQIEWISLGGGI---------------HFTDKDYPVKDFCQRLKEFSE 223 + F + + +GGG V S+ Sbjct: 321 RRAFDANAAAGGAPFDVLDIGGGFCGGFDASGTAAVSASGDATVAAAVNAALDLSFPASD 380 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA--HVPDYLLYQESATI 281 + + EPG +L V+ + V EA + D + +A I Sbjct: 381 FPGLDVIAEPGRYFAEAAASLCCRVVGERHRSRADVGAPPEPEAQYWITDGVYGAFNAII 440 Query: 282 YPNTGPYTA------------------------MVCGRSCLAGD-IFGEFHFEKPVKIGD 316 Y P+ V G +C + D +F P++ D Sbjct: 441 YDGWLPHAVVVDDPRRAHGAGDAGGRGAGAALTTVFGPTCDSLDVVFSRVRNAPPLRRDD 500 Query: 317 RISFEDVAGYNINRKNWFNGIN 338 + F Y FNGI Sbjct: 501 WLLFPCCGAYTSAGAADFNGIP 522 >gi|291408851|ref|XP_002720748.1| PREDICTED: ODC antizyme inhibitor-2 [Oryctolagus cuniculus] Length = 460 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 110/358 (30%), Gaps = 33/358 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ ++C ++ G+ L + G + ++ E+ L Sbjct: 41 FFVADLGAVVR--KHLCFLKCLPRVRPFYVVRCNSSPGVLKVLAELGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H Y K + + + +++ K K+ L + Sbjct: 99 VQHIGVPTSKIIYANPCKQIAQIKYAAKHGVRLLSFDNEMELAKVAKSHPSTKLVLCVAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 SYS L+ + + V G+ FH + ++ + + Sbjct: 159 DDSYSTSHLSLKFGAALNSCRHLLENAKKSHVEVVGVSFHISSGCPDPRAYAQSIADARL 218 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG + + + F E V I E G Sbjct: 219 VFEMGSELGHRMHILDLGGGFPGIEGAKVRFEEVASVINSALDLYFPEGCGVDILAELGR 278 Query: 236 AIVTNTTTLNTTVLDIS---------------ENIKNLVIVDSSVEAHVPDYLLYQESAT 280 VT+ T+ +++ + + V L T Sbjct: 279 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTPKTIMYHLAEGVYGIFNSVLFDSVCPT 338 Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 P Y++ + G + D E + + +GD + F+++ Y I + Sbjct: 339 PILQKKPSAEQPLYSSSLWGPTAEGCDCVAEGLWLPQLHVGDWLVFDNMGAYTIGTGS 396 >gi|312115026|ref|YP_004012622.1| Orn/DAP/Arg decarboxylase 2 [Rhodomicrobium vannielii ATCC 17100] gi|311220155|gb|ADP71523.1| Orn/DAP/Arg decarboxylase 2 [Rhodomicrobium vannielii ATCC 17100] Length = 394 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 97/342 (28%), Gaps = 26/342 (7%) Query: 16 NNLDTALYIRKNAGVKLLLALKCFAAW-GMFDTLNQYMDGTTSSSLYEVMLGHEKFGGET 74 A + N + L A+K + + N + +S EV + G Sbjct: 27 AAASAARWFLDNFPGETLYAVKANDSPKAVAALFNAGIRHFDVASATEVRAIADLPGAVM 86 Query: 75 HAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFI 132 H + I T ++ S+L+K + S Sbjct: 87 HIMHPVKSRKFIAEAYFDYGVRTFSLDSDSELDKILAVTGNAKDLTLVVRVACPSTYS-- 144 Query: 133 LADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG 187 + G + + N+ G+ FH + + + +L+ + ++ Sbjct: 145 ---EISLEGKFGAPWSEAPGLIRRARQNSNMLGVSFHAGSQMMCPVGYGQVLRTVSQQIV 201 Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDFCQR-------LKEFSEKYSVQIYLEPGEAIVTN 240 T ++ + +GGG + + Y+ Q++ EPG A+V Sbjct: 202 RAATLVDIVDVGGGFPSRYPGMEPPALDAYMDEIRGAFDKMAVGYTCQLWCEPGRALVAE 261 Query: 241 TTTLNTTVLDISENIKNLV---IVDSSVEAHVPDYLLYQESATI--YPNTGPYTAMVCGR 295 ++ V + + AH + A+ G Sbjct: 262 AESVIVRVDARRGDTLYVNDGAFGTLYDAAHCKWVFPTRAYASDGEPMRGREKAFDFYGP 321 Query: 296 SCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336 +C + D + GD I ++ Y + FNG Sbjct: 322 TCDSADYLAGPFMLPESIDEGDFIEIGNIGAYGRVMASHFNG 363 >gi|152974010|ref|YP_001373527.1| Orn/DAP/Arg decarboxylase 2 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022762|gb|ABS20532.1| Orn/DAP/Arg decarboxylase 2 [Bacillus cytotoxicus NVH 391-98] Length = 434 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 62/385 (16%), Positives = 117/385 (30%), Gaps = 34/385 (8%) Query: 8 LIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + Q++ +N + V + ALKC + L + S E+ + Sbjct: 46 IYFDQRIKDNYYSIYNAFNKYFKNVSIHFALKCNYIPACIEALFKVGCSVEVMSSIELQI 105 Query: 66 GHE-KFGGETHAYNV-AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGLR 121 + F N E+ L N I + ++ L + + L IGLR Sbjct: 106 ALQNGFKRNQIVCNGLGKTKEELLQELENSKLIFIDNINDLERINSLSLDLGKKIPIGLR 165 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSFL 173 + P++ S +P S+LG +E + N+ G+ FH K Sbjct: 166 VLPNIKSSSHE-EVMIKPSSKLGMDINTAMEFLKQSKETNSNLNIIGIQFHLMSHLKDCS 224 Query: 174 CFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSE 223 + L +IE ++I+LGGG K + Sbjct: 225 LYKEYLSSIESFLENVYKELNYSFQYINLGGGFETRFIMENNNIDISSLAKIAYDKLKNL 284 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 Y ++ +EPG I+ + + +++ ++ + + + Y Sbjct: 285 PYDYELIVEPGRYIMADAAVILASIISEKKSADVNWKITDIGSNILIPVPNIEYYTIPYK 344 Query: 284 ----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 N V +C A + + ++I + Y + + Sbjct: 345 LNDGNQPWERYNVGDATC-APSHLCKDVELPSQLVENKIIVLNCGAYTSVYSELW-AFKL 402 Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364 P I D FSYN + Sbjct: 403 PEIYYLKDDKIHNI---FSYNQFRQ 424 >gi|260427217|ref|ZP_05781196.1| Orn/DAP/Arg decarboxylase 2 [Citreicella sp. SE45] gi|260421709|gb|EEX14960.1| Orn/DAP/Arg decarboxylase 2 [Citreicella sp. SE45] Length = 375 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 106/359 (29%), Gaps = 34/359 (9%) Query: 11 KQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSLYEVMLGHEK 69 ++ + A+K A M D + + +S E+ L Sbjct: 32 LAQVTERFRR------GFPGLVTYAVKANPAPEMLDGLVAAGIRAFDVASPAEMALVRAH 85 Query: 70 FGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVS 127 Y+ + C + + + +L K + + L++ + + Sbjct: 86 CPDAVLHYHNPVRSEAEIDAGLAHGCVSWSVDRMRELEKLSRLPKGTEIAVRLKLPVTGA 145 Query: 128 YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG 187 F RL ++ +++ +E+ V L FH + ++ ++ ++ + Sbjct: 146 AYDFG--AKFGAEPRLAQELLERV-AEMGFVPSLTFHPGTQCRTPEPWARYIQAAAEIAR 202 Query: 188 HFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 + +++GGG + + + ++ EPG + Sbjct: 203 AAGVTLHRLNVGGGFPSDRGEGHPDLDAIFRTIAETTRAAFDVPPRLVCEPGRGLCAEAF 262 Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE----SATIYPNTGPYTAMVC-GRSC 297 L V + + L A D + P G + + G +C Sbjct: 263 LLALRVKAVEDAAVFLNDGIYGGMAEWRDLGPMGRLRVVTPEGLPRGGAFRGRIVFGPTC 322 Query: 298 LAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 + D + ++ D I FE + Y+ FNG G + IR Sbjct: 323 DSLDRLPDPVALPEGIREDDFIVFEGMGAYSRALVTGFNGY-----------GARRIIR 370 >gi|53133950|emb|CAG32289.1| hypothetical protein RCJMB04_22c14 [Gallus gallus] Length = 407 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 53/368 (14%), Positives = 112/368 (30%), Gaps = 33/368 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D KL+ + +K ++C + G+ + L G SS E+ L Sbjct: 40 FYVGDLGKLVKKNIQWQNVMAP--IKPFYTVRCNSTPGVLEILGTLGIGFACSSKSEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K + I S + K + K+ L I Sbjct: 98 VQGLGISPENIIYTNPCKQASQIKYAAKAGINIMTCDSDIELKKIARNHPNAKLLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + + G+ FH + K + + + Sbjct: 158 EDITADEEMNMKFGTTLKNCRHLMECAKEFGVQIVGVKFHVSGSCKELQTYIHAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 F F ++ + +GGG ++ ++ F ++ +Q+ EPG V Sbjct: 218 VFDMAEEFGFKMNMLDIGGGFTGSELQLEEVNHVIRPLLDVYFPKESGIQVIAEPGCYYV 277 Query: 239 TNTTTLNTTVLDISENIKN----------LVIVDSSVEAHVPDYLLYQE----------- 277 ++ TL V+ + + ++ D + Sbjct: 278 SSAFTLAVNVIAKKAVDCDKLLPSGVEQARNDDEQVFTYYINDGVYGSFASKLSEKLYTN 337 Query: 278 ---SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + + + G SC D E + +GD + F+++ + ++ F Sbjct: 338 PEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELSVGDWLIFDNMGSGTLGEQSTF 397 Query: 335 NGINMPTI 342 N P I Sbjct: 398 NDYQRPLI 405 >gi|86138608|ref|ZP_01057181.1| Putative Ornithine decarboxylase [Roseobacter sp. MED193] gi|85824668|gb|EAQ44870.1| Putative Ornithine decarboxylase [Roseobacter sp. MED193] Length = 383 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 106/358 (29%), Gaps = 23/358 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEV 63 P + L + + A+K + + + + +S E+ Sbjct: 23 PILYFSPRVLHQVAERFQAGFDG---LVTYAVKANPHQAVLSNLVAAGISAFDVASPAEM 79 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLR 121 YN + D + + S+L+K + + + Sbjct: 80 AAVRLASPDAVMHYNNPVRSMAEVDAGIAHDVASWSVDECSELDKLVEVPRDKEIAVRFA 139 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + F P + + + E + FH + + + + Sbjct: 140 LPVEGAAYDFGSKFGAAPQEAIALLKRVEAEGWTPAL---CFHPGTQCEDPRAWVEYIHA 196 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEF----SEKYSVQIYLEPGE 235 ++ I +++GGG ++ ++E Q+ EPG Sbjct: 197 AKRIVDAAQVPIARLNVGGGFAANRDGVAPDLERVFAAIQEAVVAAFGADHPQLICEPGR 256 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATI-----YPNTGPY 288 A+V+ + TL + + + + + + D + D L + + G Sbjct: 257 AMVSESFTLAARIKGMRKGGEMVFLNDGIYGGLVDIRDMGLPGRVEVVGADGRHREAGRS 316 Query: 289 TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 +V G +C + D + + GD + F + Y+ FNG + +A Sbjct: 317 PRVVFGPTCDSLDRLPDGLPLPDDTQAGDYVLFPGLGAYSSAMSTQFNGYGLSDVATV 374 >gi|318058910|ref|ZP_07977633.1| lysine/ornithine decarboxylase [Streptomyces sp. SA3_actG] Length = 378 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 52/369 (14%), Positives = 108/369 (29%), Gaps = 38/369 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-H 67 D + R+ + A+K G+ L G ++ E+ Sbjct: 2 YDLDGIRARYAEL--CRELPSAAVRFAMKAAPDDGVLRALAAVGAGVDAAGPQELRQALR 59 Query: 68 EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125 F E+ Y K A + ++ L A + + Sbjct: 60 AGFPVESVHYGNTIKSDADIAEAYALGVRLFVTDSREDLAALARHAPGARVFCRIAVEGG 119 Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE-- 183 + P G + + +GL H + + + + Sbjct: 120 SALWGLKHKFGCAPDE--GVRLLREAVDLGLVPSGLSVHVGSQQMDPDAWREACERLAAV 177 Query: 184 -KEFGHFITQIEWISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKY------SVQ 228 + G ++ ++LGGG+ D P+ L+E E+ + Sbjct: 178 LEALGEAGITLDHVNLGGGLPARGYLSAAGEPLDPPLDKIFATLREGVERLRAVHGGHLD 237 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIK------NLVIVDSSVEAHVP--DYLLYQESAT 280 + +EPG +V + T++ V+ ++ + + + + D L Y+ Sbjct: 238 VVMEPGRWLVADHGTIHARVVRLTRRRMPDGVLQHWLYLSCGKFNGLYEMDALQYRLRFP 297 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEF----HFEKPVKIGDRISFEDVAGYNINRKNW-FN 335 A+V G +C + D F ++ GD + Y ++ FN Sbjct: 298 TRSAAPRVPAVVAGPTCDSDDAFAHDRGHVRVPADLRSGDPVEILSCGAYALSYTTRGFN 357 Query: 336 GI-NMPTIA 343 G +P + Sbjct: 358 GFSPLPVVL 366 >gi|77462538|ref|YP_352042.1| putative ornithine decarboxylase [Rhodobacter sphaeroides 2.4.1] gi|332557423|ref|ZP_08411745.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides WS8N] gi|77386956|gb|ABA78141.1| Putative Ornithine decarboxylase [Rhodobacter sphaeroides 2.4.1] gi|332275135|gb|EGJ20450.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides WS8N] Length = 381 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 102/350 (29%), Gaps = 21/350 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P L + + A+K + + L G +S +E+ Sbjct: 23 PVLFFSPSTLQATARRFIDGFPGM---VTYAVKSNPEEVVIENLAAAGIRGYDVASPHEI 79 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + YN + V + ++ S+L K + +I +R Sbjct: 80 RMIRRIAPDAALHYNNPVRSRSEIGVGVEMGVKSWSVDSASELAKLIELVPAEGCEIAVR 139 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +VS + + L + ++ + + FH + + ++ Sbjct: 140 FKLAVSGAAYNFGAKFGATVELAVELLRRVAEAGF-IPSMTFHPGTQCTDPAAWETYIRT 198 Query: 182 IEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF-SEKYSVQIYLEPG 234 + I +++GGG + + R+ + + EPG Sbjct: 199 AAEIARDAGVTIARLNVGGGFPSHRLNGVEPELEAIFHLIDRVTDEAFGADRPLLVCEPG 258 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----- 289 I + TL + + ++ + + + + G Sbjct: 259 RGICADAFTLAARIKAVRDDAHVFLNDGVYGSLTELPMIGVIDRVAVLTPEGRRRDGETR 318 Query: 290 -AMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 ++ G +C + D GE V+ GD + F+ + Y+ FNG Sbjct: 319 DRIIFGPTCDSVDRLPGELPLAADVEEGDFLVFQGMGAYSAATNTRFNGF 368 >gi|52548994|gb|AAU82843.1| diaminopimelate decarboxylase [uncultured archaeon GZfos1D1] Length = 128 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 4/104 (3%) Query: 266 EAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 + + N G T + G C +GDI ++ GD I+ Sbjct: 16 NLLIRPAMYDAYHEVAVANKADSAGAETYDIVGPICESGDIIARDRKLPLIEPGDVIAVF 75 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 DV Y + + +NG T + + + Y D Sbjct: 76 DVGAYGFSMSSQYNGRCRCTEIMVSGGAVDVIREQEHYGDLIAK 119 >gi|126461472|ref|YP_001042586.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides ATCC 17029] gi|126103136|gb|ABN75814.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides ATCC 17029] Length = 381 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 102/350 (29%), Gaps = 21/350 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P L + + A+K + + L G +S +E+ Sbjct: 23 PVLFFSPSTLQATARRFIDGFPGM---VTYAVKSNPEEVVIENLAAAGVRGYDVASPHEI 79 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + YN + V + ++ S+L K + +I +R Sbjct: 80 RMIRRIAPDAALHYNNPVRSRSEIGVGVEMGVKSWSVDSASELAKLIELVPAEGCEIAVR 139 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 +VS + + L + ++ + + FH + + ++ Sbjct: 140 FKLAVSGAAYNFGAKFGATVELAVELLRRVAEAGF-IPSMTFHPGTQCTDPAAWETYIRT 198 Query: 182 IEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF-SEKYSVQIYLEPG 234 + I +++GGG + + R+ + + EPG Sbjct: 199 AAEIARDAGVTIARLNVGGGFPSHRLNGVEPELEAIFHLIDRVTDEAFGADRPLLVCEPG 258 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----- 289 I + TL + + ++ + + + + G Sbjct: 259 RGICADAFTLAARIKAVRDDAHVFLNDGVYGSLTELPMIGVIDRVAVLTPEGRRRDGETR 318 Query: 290 -AMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 ++ G +C + D GE V+ GD + F+ + Y+ FNG Sbjct: 319 DRIIFGPTCDSVDRLPGELPLAADVEEGDFLVFQGMGAYSAATNTRFNGF 368 >gi|103486685|ref|YP_616246.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256] gi|98976762|gb|ABF52913.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256] Length = 397 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 41/332 (12%), Positives = 91/332 (27%), Gaps = 19/332 (5%) Query: 23 YIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNV-- 79 + + + A+K + + L +S+ EV L T + Sbjct: 34 FFIERFPGTTMYAVKANPSADLLRVLWDSGVTHYDVASIAEVRLVARTLPQATLCFMHPV 93 Query: 80 -AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138 A + T +T+ +L K +A + + + L + VS Sbjct: 94 KAEEAISEAYWKHGVRTFSLDTLDELEKIV-RATEGAQDLNLLVRLRVSS-DHSKLSLAA 151 Query: 139 PFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWI 196 F E + + + + + G+ FH + + ++ ++ + ++ I Sbjct: 152 KFGAEPEDVAELLMATRQAADALGICFHVGSQAMTPHAYAQAMERVRAAIVAASVTVDII 211 Query: 197 SLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT----VLDIS 252 +GGG + + E L+ ++ + Sbjct: 212 DVGGGFPSSYPGMEPPPLDAYFDTIHRSFESLPISYSAELWCEPGRALSAEYSSLIVRVE 271 Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------TAMVCGRSCLAGDIFGEF 306 + + ++ + D + G +C D Sbjct: 272 KRRGEELYINDGAYGALFDAAHVGWRFPVSLQRDAESGAELLPFSFYGPTCDDLDHMAGP 331 Query: 307 HFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 F +K GD I + Y + FNG Sbjct: 332 FFLPADIKAGDFIEIGMLGAYGCAMRTKFNGF 363 >gi|333028924|ref|ZP_08456988.1| putative lysine/ornithine decarboxylase [Streptomyces sp. Tu6071] gi|332748776|gb|EGJ79217.1| putative lysine/ornithine decarboxylase [Streptomyces sp. Tu6071] Length = 378 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 52/369 (14%), Positives = 107/369 (28%), Gaps = 38/369 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-H 67 D + R+ + A+K G+ L G ++ E+ Sbjct: 2 YDLDGIRARYAEL--CRELPSAAVRFAMKAAPDDGVLRALAAVGAGVDAAGPQELRQALR 59 Query: 68 EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125 F E+ Y K A + ++ L A + + Sbjct: 60 AGFPVESVHYGNTIKSDADIAEAYALGVRLFVTDSREDLAALARHAPGARVFCRIAVEGG 119 Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE-- 183 + P G + + +GL H + + + Sbjct: 120 SALWGLKHKFGCAPDE--GVRLLREAVDLGLVPSGLSVHVGSQQMDPDAWREACDRLAAV 177 Query: 184 -KEFGHFITQIEWISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKY------SVQ 228 + G ++ ++LGGG+ D P+ L+E E+ + Sbjct: 178 LEALGEAGITLDHVNLGGGLPARGYLSAAGEPLDPPLDKIFATLREGVERLRAVHGGHLD 237 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIK------NLVIVDSSVEAHVP--DYLLYQESAT 280 + +EPG +V + T++ V+ ++ + + + + D L Y+ Sbjct: 238 VVMEPGRWLVADHGTIHARVVRLTRRRMPDGVLQHWLYLSCGKFNGLYEMDALQYRLRFP 297 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEF----HFEKPVKIGDRISFEDVAGYNINRKNW-FN 335 A+V G +C + D F ++ GD + Y ++ FN Sbjct: 298 TRSAAPRVPAVVAGPTCDSDDAFAHDRGHVRVPADLRSGDPVEILSCGAYALSYTTRGFN 357 Query: 336 GI-NMPTIA 343 G +P + Sbjct: 358 GFSPLPVVL 366 >gi|213646093|ref|ZP_03376146.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 165 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 52/156 (33%), Gaps = 16/156 (10%) Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES----- 278 ++V++ +EPG +V + L T V + ++ V+VD+ + + Sbjct: 6 HAVKLEIEPGRYLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRISAL 65 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328 N +V G C +GD+F E V GD + D Y Sbjct: 66 AADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAYGA 125 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 + + +N + + + R + + Sbjct: 126 SMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 161 >gi|78060535|ref|YP_367110.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia sp. 383] gi|77965085|gb|ABB06466.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia sp. 383] Length = 391 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 52/377 (13%), Positives = 103/377 (27%), Gaps = 38/377 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60 ++TP Y+ + + + + G +L+++LK M + Y DG +S Sbjct: 19 LRTPCYVYEPEVAIARYRSLK---ARLGTRLIVSLKANPNQDMLARCAHAYEDGVELASR 75 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------ 114 E+ + + N + + + A L++ + + + +F A++ Sbjct: 76 GELDAVIGRIKTPRYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAAAGGST 135 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKS 171 + LR+N A + F + D + + V GL + + Sbjct: 136 PGSVLLRVNAGALAGDDARALWHDHFGMTPNEAHDAVRTLAAASLPVAGLHVFSGPHSFI 195 Query: 172 FLCFSAM---------LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + +SLGGG + Sbjct: 196 RQDATQPDTLVLPERLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFERYATALAPL 255 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPD 271 + E G AI + T V+ + + V +H Sbjct: 256 SGQYSLAH-ESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMRRL 314 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY--NIN 329 T P + G +C D+ G P ++GD F Y + Sbjct: 315 AAPSLVRRTPAPPERGVPTIYVGSTCSRADVIGRDDTGAPPQVGDIAVFARCGAYHRTYS 374 Query: 330 RKNWFNGINMPTIAVKN 346 F Sbjct: 375 MA-HFLSHE-AAHVYVR 389 >gi|300175062|emb|CBK20373.2| unnamed protein product [Blastocystis hominis] Length = 452 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 51/372 (13%), Positives = 116/372 (31%), Gaps = 34/372 (9%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSLYEVMLG 66 + D +L T + V+ A+KC + D + + + E+ + Sbjct: 85 IFDLTSVLVQYKTWFNVFG--DVQPFYAMKCNPNPKLMDLMCSLPGMCVDCAGVEEINMC 142 Query: 67 HE-KFGGETHAYNVAYKDCEIDAVLSNCDTII--FNTVSQLNKFKDKAQKLHKKIGLRI- 122 + + K E + +++ ++ K D + K + I Sbjct: 143 LSRGIKPDHIIFANPIKSVEGIECMRKNGIWTGTVDSIEEVQKMHDVLGEDAKHCRIVIR 202 Query: 123 -NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAM 178 S+S L ++++ G+ FH N+ + Sbjct: 203 LWVDDSHSIIALGSKFGCHLSEVRGILNQVQLCGMEAVGVAFHVGTGNEDQYAYEKAVRD 262 Query: 179 LKNIEKEFGHFITQIEWISLGGGIH-----FTDKDYPVKDFCQRLKEFSEKYS------V 227 + K F + + LGGG ++ + C +++ +K+ Sbjct: 263 SAEVFKMAKEFGFTMTLLDLGGGWAGDLGNDKFENPSLTSVCGIIRDAVKKHEVFSTEGF 322 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN---IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 ++ EPG NT ++ VL++S+ + H Sbjct: 323 RMISEPGRYFNNNTVSVACKVLNVSKRGGRTVYKINEGVMGVFHDLILCDMNFDVEPLVE 382 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + A + G S + D+ +K+GD I F+++ Y+++ +P + Sbjct: 383 GEKHPASIIGSSIMQKDVVLSNIDLPEMKVGDIILFKNIGAYSVSLTT------LP---L 433 Query: 345 KNVDGTIKAIRE 356 + + +R Sbjct: 434 RRNQDHVYIVRR 445 >gi|145628393|ref|ZP_01784194.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.1-21] gi|144980168|gb|EDJ89827.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.1-21] Length = 205 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 5/157 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + G+ + + + G S E Sbjct: 26 GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117 + ++ ++ + A+ +VS+L A Sbjct: 86 LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE 154 I LR+NP V ++ G + E Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVY 182 >gi|289672832|ref|ZP_06493722.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae FF5] Length = 171 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 5/146 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + + + A+K + G+ + L + G S E Sbjct: 26 GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85 Query: 63 VMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117 + E ++ ++ A+ + +L + ++ A +L+ Sbjct: 86 LERVLAADGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRL 143 I LR+NP V ++ Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKF 171 >gi|149915813|ref|ZP_01904338.1| Putative Ornithine decarboxylase [Roseobacter sp. AzwK-3b] gi|149810395|gb|EDM70240.1| Putative Ornithine decarboxylase [Roseobacter sp. AzwK-3b] Length = 401 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 95/350 (27%), Gaps = 23/350 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEVM 64 Y L + + A+K + + + + +S E+ Sbjct: 49 LY-FSPAALQDTARRFQQGFDGM---VTYAVKANPGEEVLANLVAAGIRAFDVASPQEMA 104 Query: 65 LGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 G YN + D A + + +L+K + + + L + Sbjct: 105 AVRAVCGDAVLHYNNPVRSGDEVAVARAYGVASCSVDCPRELDKLESLPRTTEIAVRLAL 164 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + F P K + + FH + + ++ Sbjct: 165 PVAGAAYDFGEKFGLDPERAAVLLRKVAERGFVPAIT---FHPGTQCADPGAWGTYIEAA 221 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGEA 236 + QI +++GGG + ++ EPG A Sbjct: 222 AEVARAADVQIARLNVGGGFASHRGGDAPDLEAIFAHIRAETDRCFGAQAPRLVCEPGRA 281 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLYQE-----SATIYPNTGPYTA 290 +V + TL T V + + + D P Sbjct: 282 MVADALTLATRVKALRACGAVFLNDGIYGGLMEMRDIGAPGRLRVIDPQGRARQGAPVPR 341 Query: 291 MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINM 339 +V G +C + D E + GD I F+ + Y+ + FNG + Sbjct: 342 VVFGPTCDSLDRLPEPLALPGDIAEGDYILFDGMGAYSRSLTTRFNGYGL 391 >gi|115622692|ref|XP_001202483.1| PREDICTED: similar to ornithine decarboxylase, partial [Strongylocentrotus purpuratus] gi|115631770|ref|XP_793810.2| PREDICTED: similar to ornithine decarboxylase, partial [Strongylocentrotus purpuratus] Length = 365 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 95/304 (31%), Gaps = 7/304 (2%) Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ + + K ++ D + ++ K K H K+ Sbjct: 1 NEIQQVLKIGVSPSRIIFANPCKQRSHLKYAADNDVRLMTIDNEAELIKIKKIFPHAKLV 60 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 LRI S ++ L R + +V G+ FH + + + + Sbjct: 61 LRILTDDSTAQCQLGLKFGCHPRHAPALLRFAQDLELDVVGVSFHVGSGCRDPMTYVDSI 120 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 +N ++ F ++ + +GGG + + ++ + V Y Sbjct: 121 RNSKELFDFGNDLGFKMNLLDIGGGFPGQESAPIKFEEVSSQLDWFHESKVIKYFPSPND 180 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM--VCG 294 +V NT + + + V S + D+ + + V G Sbjct: 181 LVANT-VAPSKCDEPAFMYYVNDGVYGSFNCLLFDHAEVEAQLLKERDGDVQMYSTSVWG 239 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 SC D E H +++G+ + F+D+ Y + + FNG + + Sbjct: 240 PSCDGIDRIIENHLMPELEVGEWLIFQDMGAYTMCASSEFNGFKRSIGYFIISKEYLSIV 299 Query: 355 REFS 358 + + Sbjct: 300 EQIT 303 >gi|302335298|ref|YP_003800505.1| Orn/DAP/Arg decarboxylase 2 [Olsenella uli DSM 7084] gi|301319138|gb|ADK67625.1| Orn/DAP/Arg decarboxylase 2 [Olsenella uli DSM 7084] Length = 401 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 45/382 (11%), Positives = 105/382 (27%), Gaps = 39/382 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP YL D L L I V+L ++K + S E Sbjct: 18 GTPTYLFDLVALSARLAAVREIL-GPSVRLCYSIKANPFLS--RAAAECGYELEVCSPGE 74 Query: 63 VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + Y+ + A+ + + Q + +A++ ++ Sbjct: 75 LDVCRGLGIEAPAIVYSGVCKGEADVRAALDYGVGVLTAESPRQFELVEQEARRRGLRVP 134 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + + L +D+ + G+ + + + L Sbjct: 135 VLLRLNGGSQ------FGMSRGDLERIVRDREGYGAAELVGIHYFVGTQRRKLQHQRREL 188 Query: 180 KNIEKEFGHFITQIEWI----SLGGGIHFTD-KDYPVKDFCQRLKEFSEKYS-----VQI 229 + + + W G G+ + D +E + + Sbjct: 189 QMLCDLADELERRCGWRPVRLEYGPGLAVPYFEGEDFSDTLAPARELAGDLQAVAGRFDL 248 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS------------SVEAHVPDYLLYQE 277 +E G + ++ + T+V+D+ + + + + Sbjct: 249 TVEMGRFLASSCGSYLTSVVDLKDGQDDETCYAFVDGGINHVNYLGQMMGLKLPVIRNAS 308 Query: 278 SATIYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-W 333 +CG C D+ ++P+ D + FE++ Y++ Sbjct: 309 VEGGSGGPLSRERRPWTLCGSLCTTNDVLVR-QLDRPLAPDDVLVFENIGAYSVTESMYL 367 Query: 334 FNGINMPTIAVKNVDGTIKAIR 355 F MP + ++ G R Sbjct: 368 FLSRAMPRVILRRGRGDYVLAR 389 >gi|221638392|ref|YP_002524654.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides KD131] gi|221159173|gb|ACM00153.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides KD131] Length = 381 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 101/350 (28%), Gaps = 21/350 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P L + + A+K + + L G +S +E+ Sbjct: 23 PVLFFSPSTLQATARRFIDGFPGM---VTYAVKSNPEEVVIENLAAAGIRGYDVASPHEI 79 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + YN + V + ++ S+L K + +I +R Sbjct: 80 RMIRRIAPDAALHYNNPVRSRSEIGVGVEMGVKSWSVDSASELAKLIELVPAEGCEIAVR 139 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 VS + + L + ++ + + FH + + ++ Sbjct: 140 FKLPVSGAAYNFGAKFGATVELAVELLRRVAEAGF-IPSMTFHPGTQCTDPAAWETYIRT 198 Query: 182 IEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF-SEKYSVQIYLEPG 234 + I +++GGG + + R+ + + EPG Sbjct: 199 AAEIARDAGVTIARLNVGGGFPSHRLNGVEPELEAIFHLIDRVTDEAFGADRPLLVCEPG 258 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----- 289 I + TL + + ++ + + + + G Sbjct: 259 RGICADAFTLAARIKAVRDDAHVFLNDGVYGSLTELPLIGVIDRVAVLTPEGRRRDGETR 318 Query: 290 -AMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 ++ G +C + D GE V+ GD + F+ + Y+ FNG Sbjct: 319 DRIIFGPTCDSVDRLPGELPLAADVEEGDFLVFQGMGAYSAATNTRFNGF 368 >gi|170735000|ref|YP_001774114.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia MC0-3] gi|169821038|gb|ACA95619.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia MC0-3] Length = 391 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 54/377 (14%), Positives = 107/377 (28%), Gaps = 38/377 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60 ++TP Y+ + + + + G +L+++LK M + Y DG +S Sbjct: 19 LRTPCYVYEPEVAIARYRSLK---ARLGTRLIVSLKANPNQDMLARCAHAYEDGVELASR 75 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------ 114 E+ + + N + + + A L++ + + + +F A++ Sbjct: 76 GELDAVIGRIKTPRYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAAAGGST 135 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCEN-- 169 + LR+N + A + F + D + + V GL + + Sbjct: 136 PGAVLLRVNAGALAGEQARALWHDHFGMTPNEAHDAVRTLAAAGLPVAGLHVFSGPHSFI 195 Query: 170 -------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + + + +SLGGG D Sbjct: 196 RQDPTQPDTLVLPERLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFDRYAAALAPL 255 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPD 271 + E G AI + T V+ + + V +H Sbjct: 256 AGPYSLAH-ESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMRRL 314 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY--NIN 329 T P + G +C D+ G P ++GD FE Y + Sbjct: 315 AAPSLVRRTPAPPPRGVPTLYVGSTCSRADVIGRDDTGAPPQVGDIAVFERCGAYHRTYS 374 Query: 330 RKNWFNGINMPTIAVKN 346 F Sbjct: 375 MA-HFLSHE-AAHVYVR 389 >gi|326387669|ref|ZP_08209275.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium nitrogenifigens DSM 19370] gi|326207715|gb|EGD58526.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium nitrogenifigens DSM 19370] Length = 402 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 87/333 (26%), Gaps = 22/333 (6%) Query: 26 KNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNVAYKDC 84 + K L A+K + + L +S+ E L T + K Sbjct: 37 EKFPGKTLYAVKANPSPDLIRVLWDAGVTHYDVASVGEARLVRGLLPEATLCFMHPVKAP 96 Query: 85 EID---AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-------KIGLRINPSVSYSKFILA 134 T +++ +L K + + + + +R+ S YS+ LA Sbjct: 97 SAILEAYRDHGVRTFSLDSLEELEKIRLATTEANDGVEPTDLTLCVRLRVSSEYSELSLA 156 Query: 135 DPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194 + + G+ FH + S + L+ ++ Sbjct: 157 SKFGCELSDAAELLQATRQLADCL-GICFHVGSQAMSPHAYVQALEKARAAIVDASVTVD 215 Query: 195 WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT----LNTTVLD 250 I +GGG Y E N+ ++ Sbjct: 216 IIDVGGGFPSIYPGMEPPPLEDYFALIDRTYESLPVSYSAELWCEPGRALSAEYNSMIVR 275 Query: 251 ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY-----TAMVCGRSCLAGDIF-G 304 + + + + ++ + D + G +C D G Sbjct: 276 VEKRRGDELYINDGAYGALFDAAHVGWRFPVRLLREDANGDNADFSFYGPTCDDMDHMEG 335 Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 F ++ GD I + Y K FNG Sbjct: 336 PFELPADIRSGDYIEIGMLGAYGAAMKTRFNGF 368 >gi|87122118|ref|ZP_01078002.1| Orn/DAP/Arg decarboxylase 2 [Marinomonas sp. MED121] gi|86162665|gb|EAQ63946.1| Orn/DAP/Arg decarboxylase 2 [Marinomonas sp. MED121] Length = 410 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 63/402 (15%), Positives = 127/402 (31%), Gaps = 63/402 (15%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 I+TP YL ++ N G KL+ ++K + + Y+D G +S+ Sbjct: 15 IETPCYLYSVSQVAANYQALTSAL---GTKLIYSMKANNNADLLMRASHYLDGGIEVASI 71 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ L E N + + A +++ TII + + QL+ ++ K K L Sbjct: 72 GELNLV-AGGDSEKFINNPSADKKFLRAAVASRSTIIVDNLIQLDALEEFIGKRPLKPIL 130 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENK---S 171 S +F P + G ++ + + G N + + Sbjct: 131 LRLNSSVLKRFNEHHPGVRADQFGMDWDTVEKAIARCKSLQIPLAGFHLFNGSYSFAKVA 190 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQI 229 A + +++ + + + +++LGGG H+ D+ + + + LKEF + + Sbjct: 191 TATAIAGIAILQEVERLYGSPLSFVNLGGGFSDHWQDQPFDFEAYRALLKEF--PSHITL 248 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD-----------SSVEAHVP-------- 270 E G ++ + T V + K+ + + A Sbjct: 249 AHETGRGLMASAGYFATRVRYTKQIEKDFFAICDGGINQNFLLAQTENAFRRLKQPLLWR 308 Query: 271 --------------------DYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEF 306 D + + G SC D+ G+ Sbjct: 309 KSEMRVAAESGQDASSNQGADTEQDKAHQTAGPEATNVSDKGACTYVGSSCSKDDVIGKQ 368 Query: 307 HFE-KPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKN 346 + + + GD F D YN + F + + Sbjct: 369 NDDQPRPEAGDICVFADCGAYNASYTMTPFLKLPQAKTYIIE 410 >gi|254393674|ref|ZP_05008800.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|197707287|gb|EDY53099.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 454 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 98/346 (28%), Gaps = 38/346 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P YL D L + V+L A K + L Y+DG +S E+ Sbjct: 20 PAYLYDLGALREHAAAVRAALPER-VELYYAAKANPETEILTALAPYVDGYEVASGGELA 78 Query: 65 LGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 G A+ + A+ S + +L D A + + + + Sbjct: 79 HVARAVPGRPLAFGGPGKTPEEIRAALASGVGRFHVESAHELAVLADLAARARVRARVLL 138 Query: 123 NPSVSYSKFILAD----PNRPFSRLGEKCKDKI---------ESEIKNVNGLMFHNNCEN 169 +++ +L + G D S + G+ H Sbjct: 139 RFNLAVPGELLDGSALAMGGRPAPFGIDPADADAVVRTLTEGSSPWLELFGIHAHLASGL 198 Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222 + +++ + + +++GGG+ + + + + L + Sbjct: 199 DARRQLAVAASVTRWAAALTARHGVPLREVNVGGGMAVDYARPGERFDWAAYGRGLAALA 258 Query: 223 EKYSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----------- 270 +++ + +EPG A+ T VLD+ + V H+ Sbjct: 259 DEHPDTVLRIEPGRALTVYCGWYATDVLDVKRSRGEDFAVVRGGTHHLRTPATKGHDQPC 318 Query: 271 ---DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 + GP + G+ C D+ V Sbjct: 319 AVLPADDWPHPWPRPATGGPGPVTLVGQLCTPKDLLARAVPLTAVH 364 >gi|302818156|ref|XP_002990752.1| hypothetical protein SELMODRAFT_236110 [Selaginella moellendorffii] gi|300141490|gb|EFJ08201.1| hypothetical protein SELMODRAFT_236110 [Selaginella moellendorffii] Length = 146 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 7/141 (4%) Query: 231 LEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-- 287 +EPG ++V N L V + N KN +++D S+ + L Sbjct: 1 MEPGRSLVANAAALVNRVTGVKTNGNKNFIVIDGSMSELIRPSLYDAYQHIELVAPAGSD 60 Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 T V G C + D G+ K GD I D Y ++ + +N P Sbjct: 61 AEVKTYDVVGPVCESADFLGKNRELPTPKRGDGIVVHDAGAYCMSMASTYNLKMRPPEYW 120 Query: 345 KNVDGTIKAIRE-FSYNDYYN 364 DG+I IR +++D+ Sbjct: 121 IEDDGSITKIRHAETFDDHLR 141 >gi|148557557|ref|YP_001265139.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1] gi|148502747|gb|ABQ71001.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1] Length = 397 Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 87/333 (26%), Gaps = 21/333 (6%) Query: 34 LALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNV---AYKDCEIDAV 89 A+K + + L + +S+ EV L T + A + Sbjct: 45 YAVKANPSPELIQILWENGITHFDVASIAEVRLVAGIAPEATLCFMHPVKAEEAIAEAYS 104 Query: 90 LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCK 148 T +++ +L K S SK LA ++ Sbjct: 105 DYGVRTFSLDSIEELEKIVRATNGATDLTLCVRMRVSSELSKLSLASKFGVEQAEAKELL 164 Query: 149 DKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD 208 + + G+ FH + S + ++ + ++ I +GGG D Sbjct: 165 QRTRQVADAL-GICFHVGSQAMSPSAYVQAMERVRAAIVAAAVTVDVIDVGGGFPSVYPD 223 Query: 209 YPVKDFCQRLKEFSE-------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV 261 + YS +++ EPG A+ +L V + + Sbjct: 224 MEPPALEAYFGAIHQAFESLPVSYSSELWCEPGRALCAEYASLLVRVERRRGDELYINDG 283 Query: 262 DSSVEAHVPDYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIF-GEFHFEKPVKIG 315 A + G +C D G F V G Sbjct: 284 AYG--ALFDAAHIGWRFPVKLLREPESPARDIGFSFYGPTCDDMDRMAGPFMLPADVGPG 341 Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 D I + Y + FNG + + Sbjct: 342 DYIEIGMLGAYGCAMRTGFNGFTAGDRVIVEDE 374 >gi|198434359|ref|XP_002122694.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Ciona intestinalis] Length = 389 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 102/345 (29%), Gaps = 60/345 (17%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +YL D +++ NL ++ A+KC + + L G +S +E+ Sbjct: 52 FYLGDLGQIVRNLQMWRKHM--PQIRPYYAMKCNPSQPVIQLLASLGVGFDCASGFEIES 109 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + + V K A + T+ F+ +L+K K + Sbjct: 110 ALKCGVQPDDILFAVPCKMSSHIKYACQTGVRTMTFDNADELHKIKRIHPTGN------- 162 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + S Sbjct: 163 --------------------------------------FHPGSGSNSFDPIDRSLQQCRE 184 Query: 183 EKEFGH-FITQIEWISLGGGIHFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVT 239 +F + ++ I +GGG+ T+ V K F + V++ EPG +V Sbjct: 185 LYDFANLNGIDLKIIDIGGGLVCTESFIKVSFQITTAVNKLFPPETGVKVIAEPGTFLVE 244 Query: 240 NTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMV 292 N + T V + + K + ++ + ++ Y V Sbjct: 245 NAFSFVTNVHGKALVGDTAKYYIGAGVFTAFNLKFFEEFKRIPENLSREAEKGKYYRTSV 304 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 G +C D + +I D F+++ Y+ FNG Sbjct: 305 YGPTCAGDDCVVDNIMLPEAQINDWWIFDNMGAYSSLVSLGFNGY 349 >gi|119627879|gb|EAX07474.1| arginine decarboxylase, isoform CRA_f [Homo sapiens] Length = 483 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 34/330 (10%), Positives = 105/330 (31%), Gaps = 18/330 (5%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L Q G + ++ E+ L Sbjct: 109 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 166 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H K + + + +++ A+ + + Sbjct: 167 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEME----LAKVVKSHPSANFHI 222 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + +RL + ++ ++ ++ E + + F + I Sbjct: 223 GSGCPDPQAYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTE-GAKVRFEEIASVINS 281 Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244 + + + + + + + +PG + Sbjct: 282 ALDLYFPEGCGVDIFAELGRYYVTSAFTVAVSIIA-----KKEVLLDQPGR--EEENGST 334 Query: 245 NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFG 304 + T++ + I +S + ++ + Q+ + Y++ + G + D Sbjct: 335 SKTIVY-HLDEGVYGIFNSVLFDNICPTPILQKKPSTEQP--LYSSSLWGPAVDGCDCVA 391 Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 E + + +GD + F+++ Y + + F Sbjct: 392 EGLWLPQLHVGDWLVFDNMGAYTVGMGSPF 421 >gi|163747196|ref|ZP_02154551.1| Putative Ornithine decarboxylase [Oceanibulbus indolifex HEL-45] gi|161379471|gb|EDQ03885.1| Putative Ornithine decarboxylase [Oceanibulbus indolifex HEL-45] Length = 386 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 97/355 (27%), Gaps = 30/355 (8%) Query: 22 LYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVA 80 + + + A+K + + + + +S E+ YN Sbjct: 37 RRFQADFDGLVTYAVKANDRPEVLSNLVAAGITSFDVASPAEMAAVRAVCPQAVLHYNNP 96 Query: 81 YKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138 + + + +S+L K D + + + + F Sbjct: 97 VRSTAEVKAGIVAGVYSWSIDDMSELAKLHDVPRDNEVAVRFALPVKGAAYDF------- 149 Query: 139 PFSRLGEKCKDKIESEIKNVNG-----LMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193 S+ G V L FH + + + I Sbjct: 150 -GSKFGAAPAQAAALLRAVVEMGFTPSLCFHPGTQCNDPQAWVQYVHAAADILRMADVSI 208 Query: 194 EWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT 247 + +++GGG L E + + EPG A+V + L T Sbjct: 209 KRMNIGGGFAVDRGFDAPDHRAVFAAVKAALAESFGAEAPTLLCEPGRAMVADAAVLATR 268 Query: 248 VLDISENIKNLVIVDSSVEAH--VPDYLLYQESATI-----YPNTGPYTAMVCGRSCLAG 300 + + + + + D + D L + P +V G +C + Sbjct: 269 IKGMRNEGRTVFLNDGIYGGLPDLRDMGLSGLVDVVGPDGALRQGAPKPRVVFGPTCDSL 328 Query: 301 DIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 D + + GD + F + Y+I FNG + + + + G Sbjct: 329 DRLPDGLPLPEDAQTGDYLLFGGMGAYSIAMSTAFNGYGLGRVELVSGLGDEVKR 383 >gi|299069046|emb|CBJ40297.1| putative diaminopimelate decarboxylase [Ralstonia solanacearum CMR15] Length = 428 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 123/393 (31%), Gaps = 40/393 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 TP ++ + +L+ N+ AG V + + A + L G Sbjct: 37 GTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFPNANPHILKPLRDEGAGILLQ 96 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E L + + + + E A S D +F ++ L++ ++ I Sbjct: 97 MPNEYKLITQYGFSDFIV-SPGHVSNEEIAFWSQKDYPVF--LASLDEIAYAIREQAPTI 153 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 +RI+ S I D + + + + + N Sbjct: 154 SVRIDSLGSDKPGIKVDQLG-------DLAKLLSANGRTLECFEVYCGSGNSLQGMIDIA 206 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKYSVQ--- 228 + HF I+ GG F K + + Q +++ + + + Sbjct: 207 RQIFRMYLDHF-PTARSINFAGGHGFDYAKWSEAEKHFDWTTYFQAIRDLATEMKIPETV 265 Query: 229 -IYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESAT------ 280 EPG ++ + L T + DI ++ ++V +P L + Sbjct: 266 RFLFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSRMLMPSAQLRNRAHHTVFLDA 325 Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + A V GRS L D G+ + VK G+ + DV Y + F Sbjct: 326 AFNEVVDYSKRCVAKVRGRSILRNDYILPGDVVAPETVKAGEYMLILDVGAYCATQHMEF 385 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN-DYYNNL 366 + + DG I + + D + NL Sbjct: 386 LNVPPAGEVLVEADGAIYMVTRPGNDLDKWRNL 418 >gi|271965222|ref|YP_003339418.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021] gi|270508397|gb|ACZ86675.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021] Length = 432 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 59/396 (14%), Positives = 112/396 (28%), Gaps = 47/396 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 PY+++ NL + L + GV ++ A K A +T G +S E Sbjct: 36 PYHVLFPDAFAANLTSFLDVLDETGVTGRVHYAKKANKAACWIETCADLGVGVDVASAEE 95 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + G K ++ + +I L++ A +I LR Sbjct: 96 LRDALGHGVRGTRIVVTGPAKSDDLLRLAVRQGCLITV--DALDELDRVAGLYGARIMLR 153 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML-- 179 + P L ++E ++ G + + L Sbjct: 154 VTPPDQPHSRFGMTERELERALARCGPLRLEGFSCHLTGYEVQPRADMAALLLRWCERAR 213 Query: 180 ------------------KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------- 214 +++ F G + Sbjct: 214 ARGIAAGGVGIGGGFAVDYLAAEDWREFTGDPSNFHAGRRFDGFYPYHSPVAGAAALRAV 273 Query: 215 --------CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE 266 + V + LEPG A++ V + + +V VD + Sbjct: 274 LAATPSGGSADVAALLRDAGVTLILEPGRALLDQAGFTVFRVQGVKDRDYGIVTVDGTSL 333 Query: 267 AHVPDYL----LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH--FEKPVKIGDRISF 320 + + L + + V G SCL D+ + GD + + Sbjct: 334 SLSEQWFGSEFLPEPIPVPAREGPAFETCVGGASCLESDMLTWRRIVLPGRPRPGDLLVY 393 Query: 321 EDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAIR 355 + AGY ++ + F+G+ +P V N DG+ + R Sbjct: 394 PNTAGYQMDSNESPFHGLPLPPKVVVNADGSWRLDR 429 >gi|13471573|ref|NP_103139.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099] gi|14022315|dbj|BAB48925.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099] Length = 406 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 101/363 (27%), Gaps = 34/363 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P Y Q L + + + K A+K + TL + +S E Sbjct: 19 PVYCFRPQVLKADARQFMGMFPG---KTAYAVKTNGEQIVLKTLVEAGVTAFDVASPGEF 75 Query: 64 MLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119 Y A D ++ I + ++ K + L G Sbjct: 76 AAVRAVSPDAEMLYMHPVKAQSDIKLALEKYGIRVISLDHEDEITKLTRVVRALDIDPGS 135 Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + + + L+ + +++ V GL FH + + + Sbjct: 136 ISVFVRIQTKGSAAYELSKKFGAGPAYAVELAERLNRTGYKV-GLCFHVGSQIEDPDTYE 194 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---------LKEFSEKYSV 227 L + + I + +GGG P + + L ++Y Sbjct: 195 RALASADWVRNRLTFDIAGLDVGGGFPAEYGHDPNRKQIEMPSLGQIMSRLSGDLKEYQF 254 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ--------ESA 279 E + ++ + + ++ + A + D + Sbjct: 255 DQMPLVAEPGRVIVARCLSLIVRVLLRKGKRLYINDGIWASLSDSWTGKITLPARFIPDP 314 Query: 280 TIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334 I G VCG +C + DI + V GD I + Y+++ + F Sbjct: 315 AIRTRNGAEKNVVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTRF 374 Query: 335 NGI 337 NG Sbjct: 375 NGF 377 >gi|241607215|ref|XP_002405819.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215500690|gb|EEC10184.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 358 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 103/333 (30%), Gaps = 15/333 (4%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D + L + +D ++ G+ A+KC + TL+ S++ E+ + Sbjct: 29 FFVCDVRDLEHKVDLWR--QELPGITPFYAVKCSTDPVVLHTLSSRGVNFDCSNMSEIKM 86 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E + Y K S + K + ++ LRI Sbjct: 87 VLEMGVSPDRIVYANTIKSSSHLDFASEHGVTLMTFDCMEEL--GKISDKNARLLLRIAS 144 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + S + + NV G+ FH + F+ + Sbjct: 145 NETGSGITMNNKFGCRLEEAGNLLQIARYMGFNVVGIAFHVGAAYRCPDIFARSIAEARS 204 Query: 185 EFG---HFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPGE 235 F + + +GGG + C+ ++ ++Y ++ EPG+ Sbjct: 205 VFNVGIRIGHPMTVLDIGGGFTGGLRSHDRLLKLCETIRVAVDEYFPASSGVRVIAEPGQ 264 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATIYPNTGPYTAMVCG 294 VT+ TL T V+ + + + + + V G Sbjct: 265 FFVTSAYTLATRVVAERRKDIEINGEFGQKYNEIKYTVCASGHAQPPHERPCNILSTVWG 324 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 +C D + V + + + +++ Y Sbjct: 325 ATCNPLDCILDKQPLFEVCVNEWLLMDNMGAYT 357 >gi|290969752|ref|XP_002667945.1| predicted protein [Naegleria gruberi] gi|284080827|gb|EFC35201.1| predicted protein [Naegleria gruberi] Length = 144 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 5/139 (3%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG-- 286 EPG ++V N L T V + KN +VD+++ + + Sbjct: 1 MFEPGRSVVGNAGLLLTEVQYLKHGEEKNFAVVDAAMNDLMRPAMYEAWHGVQTVKENAG 60 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 P V G C +GD + GD ++ Y + + +N + Sbjct: 61 QPRIYDVVGPVCESGDWLARSRELA-IHEGDLLALMSAGAYGMTMASNYNTRGRAAEVLV 119 Query: 346 NVDGTIKAIREFSYNDYYN 364 + + D + Sbjct: 120 DGSQVHLVRARENPADLFA 138 >gi|319782827|ref|YP_004142303.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168715|gb|ADV12253.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 406 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 100/363 (27%), Gaps = 34/363 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P Y Q L+ + + + K A+K + TL + +S E Sbjct: 19 PVYCFRPQVLMADARQFMGMFPG---KTAYAVKTNGEQIVLKTLVEAGVKAFDVASPGEF 75 Query: 64 MLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119 Y A D ++ I + ++ K + L G Sbjct: 76 AAVRAVSPDAEMLYMHPVKAQSDIKLALEKYAIRVISLDHEDEITKLTRVVRALDIDPGS 135 Query: 120 LRINPSVSYSKFILA---DPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + + V + +++ V GL FH + + + Sbjct: 136 ISVFVRVQTKGHAAYELSKKFGAGPAYAVELAERLNRTGYKV-GLCFHVGSQIEDPDTYE 194 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---------LKEFSEKYSV 227 L + + I + +GGG P + + L ++Y Sbjct: 195 RALASADWVRNRLTFDIAGLDVGGGFPAEYGHDPNRKQIEMPSLGQIMSRLSGDLKEYQF 254 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ--------ESA 279 E + ++ + + ++ + A + D + Sbjct: 255 DQMPLVAEPGRVIVARCLSLIVRVLLRKGKRLYINDGIWASLSDSWTGKITLPARFIPDP 314 Query: 280 TIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334 I G VCG +C + DI + V GD I + Y+++ + F Sbjct: 315 AIRSRNGEEKNIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTRF 374 Query: 335 NGI 337 NG Sbjct: 375 NGF 377 >gi|146279119|ref|YP_001169278.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides ATCC 17025] gi|145557360|gb|ABP71973.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides ATCC 17025] Length = 381 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 95/349 (27%), Gaps = 19/349 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P L + + A+K + + L G +S +E+ Sbjct: 23 PVLFFSPSILQATARRFIDGFPGM---VTYAVKSNPEEVVIENLAAAGIRGYDVASPHEI 79 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + YN + AV ++ S+ K + + + Sbjct: 80 RMIRRIAPDAALHYNNPVRSRAEIAVAVEMGVKSWSVDSKSELAKLIELVPAEGCEISVR 139 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-VNGLMFHNNCENKSFLCFSAMLKNI 182 + S + + + + + + FH + + ++ Sbjct: 140 FKLPVSGAAYNFGAKFGATVELAIELLKTVAEAGFIPSMTFHPGTQCTDPAAWETYIRTA 199 Query: 183 EKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF-SEKYSVQIYLEPGE 235 + I +++GGG + + R+ + + EPG Sbjct: 200 AEIAREAGVTIARLNVGGGFPSHRLNGVEPELEAIFHLIDRVADEAFGADRPLLVCEPGR 259 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------ 289 I + TL T + + ++ + + + ++ G Sbjct: 260 GICADAFTLATRIKAVRDDAHVFLNDGVYGSLTELPLIGVIDRVSVLTPEGRRREGETRD 319 Query: 290 AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 ++ G +C + D V GD + F+ + Y+ FNG Sbjct: 320 RIIFGPTCDSVDRLPGELPLSVDVAEGDFLVFQGMGAYSTATNTRFNGF 368 >gi|84386911|ref|ZP_00989935.1| Orn/DAP/Arg decarboxylase, family 2 [Vibrio splendidus 12B01] gi|84378201|gb|EAP95060.1| Orn/DAP/Arg decarboxylase, family 2 [Vibrio splendidus 12B01] Length = 404 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 66/387 (17%), Positives = 129/387 (33%), Gaps = 33/387 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +YL+D K +N D L K + + + K + +++ S E Sbjct: 17 FYLLDSSKFEDNYDEFLLAFKKYYSKTNIGYSYKTNYTPKLCKIVDRKGGYAEVVSDMEY 76 Query: 64 MLGHE-KFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--- 118 L + E N YK + + + ++ +++ K+ AQ K Sbjct: 77 ALALKLSVRAENIVVNGPYKPVKFLKEAIFGGSIVNLDSYTEIELVKELAQDNPDKQLKV 136 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 G+R N + + S E+ K E V G+ H + + Sbjct: 137 GIRCNFDIGNDVVSRFGIDVEDSTFFEQFKLINEIANLEVVGIHCHF-PDRNAPSYKVRA 195 Query: 179 LKNIEKEFGHFITQIEWISLGGGI-----------HFTDKDYPVK------DFCQRLKEF 221 K I F T ++I +GGG + +Y F +R + Sbjct: 196 EKIIALSDKLFKTPPKYIDVGGGYFGKMPDALKGQFSSYHEYDEYAENIASQFAKRYGDL 255 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281 E + LEPG AIV +T + ++DI + + S + ++ Sbjct: 256 PESEQPTLILEPGSAIVGDTVKFVSKIIDIKSVRGKFIAMSSGSKFNIGLLSSSVNMPIE 315 Query: 282 YPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + G +C+ D + + P+ D + +V Y+I K F Sbjct: 316 VFSKEQGEYFIDIDISGFTCIESDYLYKGYN-GPLSKDDYVVLSNVGSYSIVFKPPFILP 374 Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYY 363 N P ++ + + + ++ + D + Sbjct: 375 NFP--VLEMAEQSFEIVKRKETVEDIF 399 >gi|107028395|ref|YP_625490.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia AU 1054] gi|116686391|ref|YP_839638.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia HI2424] gi|105897559|gb|ABF80517.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia AU 1054] gi|116652106|gb|ABK12745.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia HI2424] Length = 391 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 54/377 (14%), Positives = 107/377 (28%), Gaps = 38/377 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60 ++TP Y+ + + + + G +L+++LK M + Y DG +S Sbjct: 19 LRTPCYVYEPEVAIARYRSLK---ARLGTRLIVSLKANPNQDMLARCAHAYEDGVELASR 75 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------ 114 E+ + + N + + + A L++ + + + +F A++ Sbjct: 76 GELDAVIGRIKTPRYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAAAGGST 135 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCEN-- 169 + LR+N + A + F + D + + V GL + + Sbjct: 136 PGAVLLRVNAGALAGEQARALWHDHFGMTPNEAHDAVRTLAAAGLPVAGLHVFSGPHSFI 195 Query: 170 -------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + + + +SLGGG D Sbjct: 196 RQDPTQPDTLVLPELLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFDRYAAALAPL 255 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPD 271 + E G AI + T V+ + + V +H Sbjct: 256 AGPYSLAH-ESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMRRL 314 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY--NIN 329 T P + G +C D+ G P ++GD FE Y + Sbjct: 315 AAPSLVRRTPAPPPRGVPTLYVGSTCSRADVIGRDDAGAPPQVGDIAVFERCGAYHRTYS 374 Query: 330 RKNWFNGINMPTIAVKN 346 F Sbjct: 375 MA-HFLSHE-AAHVYVR 389 >gi|330952170|gb|EGH52430.1| diaminopimelate decarboxylase [Pseudomonas syringae Cit 7] Length = 90 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 24/80 (30%), Gaps = 1/80 (1%) Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + P + G C GD + + GD ++ Y + +N + Sbjct: 5 SEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVL 63 Query: 345 KNVDGTIKAIREFSYNDYYN 364 + + R + + + Sbjct: 64 VDGSQAFEVRRRETVAELFA 83 >gi|148698195|gb|EDL30142.1| mCG13535 [Mus musculus] Length = 366 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 73/254 (28%), Gaps = 12/254 (4%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + + D L++ T L V+ A+KC + + L G +S E+ Sbjct: 52 FMVADLDVLVSRHRTFLQALPR--VQPFYAVKCNSNPWVLLVLAALGTGFDCASQGELEQ 109 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + K + C + ++ K ++ LRI Sbjct: 110 VLGLGVAPSRIIFANPCKAVSHIQFAARCGVQLLTFDNEEELIKLARYHPRARLVLRIQT 169 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S F L V G FH + + + + + + Sbjct: 170 LDSQSTFPLHTKFGAHLEACGHLLQVARELGLAVVGASFHVGSDCHTPESYRQAIADCHR 229 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGE 235 F + + LGGG + R+ + F E+ +++ EPG Sbjct: 230 VFEMGCKAGHHMSLLDLGGGFPGVKGSEAKFEEVARVINTALAQYFPEETGIEVIAEPGR 289 Query: 236 AIVTNTTTLNTTVL 249 + T ++ Sbjct: 290 FYAGSVCTAAVNII 303 >gi|115360880|ref|YP_778017.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia ambifaria AMMD] gi|115286208|gb|ABI91683.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia ambifaria AMMD] Length = 391 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 52/378 (13%), Positives = 106/378 (28%), Gaps = 40/378 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60 ++TP Y+ + + + + G KL+++LK M + Y DG +S Sbjct: 19 LRTPCYVYEPEVAIARYRSLK---ARLGTKLIVSLKANPNQDMLARCAHAYEDGVELASR 75 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------ 114 E+ + + N + + + A L++ + + + +F A++ Sbjct: 76 GELDAVIGRIRTPRYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAATGGAT 135 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---------SEIKNVNGLMFHN 165 + LR+N + A + F + D + + + +G Sbjct: 136 PGAVLLRMNAGALAGEHARALWHDHFGMTPNEAHDAVRTLAAAGLPAAGLHVFSGPHSFI 195 Query: 166 NCENKSFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEF 221 + + + +SLGGG + + L Sbjct: 196 RQDAAQPDTLVLPERLAALARDLAPANGAPLSALSLGGGFADDHPGDAAFERYAAALAPL 255 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VP 270 + Y + E G AI + T V+ + + V +H Sbjct: 256 AGDY--TLAHEAGRAIFADAGVFATRVVAVKPWQDRTIAVCDGGLSHAFLLAQTESVMRR 313 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY--NI 328 P + + G +C D+ G P ++GD F Y Sbjct: 314 LAAPSLVRRGAAPPSRAVPTLYVGSTCSRADVIGRDDTGAPPQVGDIAVFARCGAYHRTY 373 Query: 329 NRKNWFNGINMPTIAVKN 346 F Sbjct: 374 AMA-HFLSHE-AAHVYVR 389 >gi|83747325|ref|ZP_00944366.1| Hypothetical Protein RRSL_02271 [Ralstonia solanacearum UW551] gi|83726025|gb|EAP73162.1| Hypothetical Protein RRSL_02271 [Ralstonia solanacearum UW551] Length = 428 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 125/393 (31%), Gaps = 40/393 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 TP ++ + +L+ N+ AG V + + A + L G Sbjct: 37 GTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFPNANPHILKPLRDEGAGILLQ 96 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E L + + + + E A S +F ++ L++ ++ I Sbjct: 97 MPNEYKLITQYGFSDFIV-SPGHVSNEEIAFWSQKHYPVF--LASLDEIAYAVRENAPTI 153 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 +RI+ S I D + + +++ + N Sbjct: 154 SVRIDSLGSDKPGIKVDQLG-------SLAQMLSASGRSLECFEVYCGSGNSLQGMIDIA 206 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKYSVQ--- 228 + HF I+ GG F + + + Q +++ + + + Sbjct: 207 RQIFRMYLDHF-PTARSINFAGGHGFNYEKWSESEKRFDWTTYFQAIRDLATEMKIPETV 265 Query: 229 -IYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESAT------ 280 EPG ++ + L T + DI ++ ++V +P L S Sbjct: 266 KFMFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSRMLMPSAQLRNRSHNTVFLDS 325 Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I + A + GRS L D GE + +K G+ + DV Y + F Sbjct: 326 AFNEIVDYSKRCNAKIRGRSILRNDYILPGEVVAPETIKAGEYMLILDVGAYCATQHMEF 385 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN-DYYNNL 366 + + DGTI + + + D + NL Sbjct: 386 LNVPPAGEVLVEADGTIYMVTKPGNDLDKWRNL 418 >gi|260464329|ref|ZP_05812521.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075] gi|259029953|gb|EEW31237.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075] Length = 406 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 101/363 (27%), Gaps = 34/363 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P Y Q L + + + K A+K + TL + +S E Sbjct: 19 PVYCFRPQVLKADARQFMGMFPG---KTAYAVKTNGEQIVLKTLVEAGVTAFDVASPGEF 75 Query: 64 MLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119 Y A D ++ I + ++ K + L G Sbjct: 76 SAVRAVSPDAEMLYMHPVKAQSDIKLALEKYAIRVISLDHEDEITKLTRVVRALDIDPGA 135 Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + + + L+ + +++ V GL FH + + + Sbjct: 136 ISVFVRIQTKGSAAYELSKKFGAGPAYAVELAERLNRTGYKV-GLCFHVGSQIEDPDTYE 194 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---------LKEFSEKYSV 227 L + + I + +GGG P + + L ++Y Sbjct: 195 RALASADWVRNRLTFDIAGLDVGGGFPAEYGHDPNRKQIEMPSLGQIMSRLSGDLKEYQF 254 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ--------ESA 279 E + ++ + + ++ + A + D + Sbjct: 255 DQIPLVAEPGRVIVARCLSLIVRVLLRKGKRLYINDGIWASLSDSWTGKITLPARFIPDP 314 Query: 280 TIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334 I G VCG +C + DI + V GD I + Y+++ + F Sbjct: 315 AIRSRNGEEKNIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTRF 374 Query: 335 NGI 337 NG Sbjct: 375 NGF 377 >gi|254250509|ref|ZP_04943828.1| Diaminopimelate decarboxylase [Burkholderia cenocepacia PC184] gi|124879643|gb|EAY66999.1| Diaminopimelate decarboxylase [Burkholderia cenocepacia PC184] Length = 402 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 54/377 (14%), Positives = 107/377 (28%), Gaps = 38/377 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60 ++TP Y+ + + + + G +L+++LK M + Y DG +S Sbjct: 30 LRTPCYVYEPEIAIARYRSLK---ARLGTRLIVSLKANPNQDMLARCAHAYEDGVELASR 86 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------ 114 E+ + + N + + + A L++ + + + +F A++ Sbjct: 87 GELDAVIGRIKTPRYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLARESAAGGST 146 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCEN-- 169 + LR+N + A + F + D + + V GL + + Sbjct: 147 PGAVLLRVNAGALAGEQARALWHDHFGMTPNEAHDAVRTLAAAGLPVAGLHVFSGPHSFI 206 Query: 170 -------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + + + +SLGGG D Sbjct: 207 RQDPTQPDTLVLPELLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFDRYAAALAPL 266 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPD 271 + E G AI + T V+ + + V +H Sbjct: 267 AGPYSLAH-ESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMRRL 325 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY--NIN 329 T P + G +C D+ G P ++GD FE Y + Sbjct: 326 AAPSLVRRTPAPPPRGVPTLYVGSTCSRADVIGRDDAGAPPQVGDIAVFERCGAYHRTYS 385 Query: 330 RKNWFNGINMPTIAVKN 346 F Sbjct: 386 MA-HFLSHE-AAHVYVR 400 >gi|294953653|ref|XP_002787871.1| Ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983] gi|239902895|gb|EER19667.1| Ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983] Length = 470 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 49/415 (11%), Positives = 103/415 (24%), Gaps = 85/415 (20%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 L+D +L + + + V A+KC + TL + +++ E+ L Sbjct: 47 LLDLGQLEHQMRRWKDLLPR--VTPYYAVKCNPEPMLVKTLYRLGCKFDCATINEMRLVR 104 Query: 68 ----------EKFGGETHAYNVAYKDCEID-------AVLSNCDTIIFNTVSQLNKFKDK 110 E F + A + ++ ++ S++ K Sbjct: 105 NILSDDIGTTEGFDVHEMMASHVVYANPTKLPSQLVGARDLGVEYLVADSASEIAKIAHH 164 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 K + L + + + ++ NV G+ FH Sbjct: 165 HPKAKLLLRLACVDNNAQCPMSAKFGASLGVTVTVLLEEA-MKHGVNVVGVSFHVGSGCS 223 Query: 171 SFLCFSAMLKNIEKEFG----HFITQIEWISLGGGI--------HFTDKDYPVKDFCQRL 218 + L + + F + ++ + +GGG K Sbjct: 224 DVHSITKALVDAREVFDAAASRYGLRLSVLDIGGGFQGVDREGSPVAFKSMATVVNSLLD 283 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTT------TLNTTVLDISENIKNLVIVDSSVEAHVPDY 272 F + VQ+ EPG + V+ + + D + E + Sbjct: 284 TLFPDPDDVQVIAEPGRYFACSPCSLVTKIYSKNVVVSAPKLSEMKSAADIAEEDTMDSG 343 Query: 273 LLYQ--------------------------------ESATIYPNTGPY------------ 288 + Sbjct: 344 SSSSSASVDELAGKNLTSLTRLYLNDGVYGSFNCILYDHQQVWPEALHEESGVCGDPKVA 403 Query: 289 --TAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T ++ G +C D ++IG + + ++ Y FNG + P Sbjct: 404 NPTHVLFGPTCDGFDTIMNGVTHLPEMEIGHHLLWRNMGAYTTAAATNFNGFDTP 458 >gi|90418219|ref|ZP_01226131.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1] gi|90337891|gb|EAS51542.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1] Length = 406 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 47/363 (12%), Positives = 97/363 (26%), Gaps = 34/363 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P Y L + + + A+K + +TL++ +S E Sbjct: 19 PVYCFRPAVLTADAERFMAAFPG---DTAYAVKTNGEPMVLETLSRAGVRIFDVASPGEF 75 Query: 64 MLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119 Y A D + + + ++ K + L G Sbjct: 76 EAVRAAQPDAEMLYMHPVKAQSDIRLALETYGIRVMSLDHEDEVVKILRVVRALDLDPGK 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV---NGLMFHNNCENKSFLCFS 176 + + + + ++ F + ++ + G+ FH + + + Sbjct: 136 ITLFIRIQTKGSAAYELSKKFGAAPAHAVELLQR-CHRIGFKVGICFHVGSQIEDPDTYE 194 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ------------RLKEFSEK 224 L + + + I +GGG P + + E Sbjct: 195 RALASADWVRNRADVPLAGIDVGGGFPAEYGHDPRRRKKEMPGFGAIMTRLTADMEEWGF 254 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI---------VDSSVEAHVPDYLLY 275 + + EPG +V +L VL + + Sbjct: 255 SDMPMVAEPGRVVVARAFSLIVRVLLRKGKRLYINDGIWASLSDSWTGKITLPARFIPDP 314 Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334 + VCG +C + DI + V GD I + Y+++ + F Sbjct: 315 ARQSRNGDPANIQAFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTRF 374 Query: 335 NGI 337 NG Sbjct: 375 NGF 377 >gi|125539468|gb|EAY85863.1| hypothetical protein OsI_07224 [Oryza sativa Indica Group] Length = 427 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 97/354 (27%), Gaps = 24/354 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + ++D ++ + GV+ A+KC + L G +S E+ Sbjct: 63 FNVLDLGEVARLFAAWWRGLR--GVRPYYAVKCNPNPALLGALAGLGAGFDCASRAEMEA 120 Query: 66 GHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y + A D F++ ++ K K + ++ Sbjct: 121 VLALGVAADRVVYANQCKLEPHLEYAAGVGVDLTTFDSEEEVGKIKRCHPGCRLLLRIKA 180 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSAMLK 180 +L + + E + V G+ FH ++A ++ Sbjct: 181 PDGDDGGGAMLNLGTKYGAHRDEVVPLLAAARRAGMAVVGVSFHVGSAVSRVGIYAAAIE 240 Query: 181 NIEKEFGHFITQIEWIS--LGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL------- 231 G + + S + + + + + E ++ + Sbjct: 241 AARAGGGGGESTFQGASAVISAALARHFGGDDMPSGVEVIAEPGRYFAETAFALAARIFG 300 Query: 232 -----EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT- 285 E E + + + + V ++ + I Sbjct: 301 KRTRGEVREYWIDDGMFGTLCCVHFENYVPRPAPVTATADDGDEQAATMGGEMMITSTNT 360 Query: 286 --GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + V G + + D + + GD + F+DV Y + FNG Sbjct: 361 STKTHPSTVFGPTLDSFDEVVRGYQLPELCTGDWLVFDDVGAYTTVCSSDFNGF 414 >gi|226328787|ref|ZP_03804305.1| hypothetical protein PROPEN_02687 [Proteus penneri ATCC 35198] gi|225201973|gb|EEG84327.1| hypothetical protein PROPEN_02687 [Proteus penneri ATCC 35198] Length = 351 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 97/337 (28%), Gaps = 39/337 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ + + + A K + + + S SL E Sbjct: 11 GTPLWIYQGDTISQRIAQLNSFDV-----VRFAQKACSNIHILRLMKAQGVKVDSVSLGE 65 Query: 63 VMLGH-----EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + + D + D + ++ L + + Sbjct: 66 IERALVAGYQGGREKSEIVFTADLLDERTIERVVELDIPVNAGSIDMLRQLGKR--NQGH 123 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170 + +RINP + + S+ G +D I+ + G H Sbjct: 124 AVWIRINPGFGHGHSQKTNTGGENSKHGIWYEDVPEALAVIQQYNLTLVGFHMHIGSGVD 183 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224 S +E+ I+ IS GGG+ ++ +K Sbjct: 184 YHHLSSVCDAMVEQVLTSQ-VDIQAISAGGGLSTPYQEGDATVDLDHYFSLWDKARQRIA 242 Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279 +S+++ +EPG +V + L + V + ++ V+VD+ + + Sbjct: 243 QHLGHSIELEIEPGRFLVAESGVLISQVRAVKSMGSRHYVLVDAGFSDLMRPAMYGSYHQ 302 Query: 280 --------TIYPNTGPYTAMVCGRSCLAGDIFGEFHF 308 I P T +V G C +GD+ Sbjct: 303 ISVLDSHGQIKPMTELQETIVAGPLCESGDVLLSKRE 339 >gi|328468746|gb|EGF39721.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus MTCC 5462] Length = 258 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 20/230 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP Y+ D + + + + + AGV + A K FA M++ S Sbjct: 26 QTPLYVYDVGAIRHQIRAFKQVFETAGVAYAISYASKAFATIAMYEVAKAEAIHVDVVSG 85 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVS--QLNKFKDKAQKLH 115 E+ F E +++ K A+ + TII + L KA Sbjct: 86 GELYTAQAADFPMEKVSFHGNNKSKAELEQALDAGVGTIIVDNFHELDLLDELLKAAVGK 145 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166 + + +R+ P +S + S+ G E K + + N+ G+ H Sbjct: 146 QNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESGQADEAAKRVLADDHLNLLGIHAHIG 205 Query: 167 CENKSFLCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTDKDYPVK 212 + F A+ + ++ F + +++GGG Sbjct: 206 SQIFEVTGFEAVTQKLLAVLDHWHQQFGFTPKVLNVGGGFGIAYTKQDDP 255 >gi|83594465|ref|YP_428217.1| Orn/DAP/Arg decarboxylase 2 [Rhodospirillum rubrum ATCC 11170] gi|83577379|gb|ABC23930.1| Orn/DAP/Arg decarboxylase 2 [Rhodospirillum rubrum ATCC 11170] Length = 404 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 45/374 (12%), Positives = 101/374 (27%), Gaps = 32/374 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+Y D+ + + AL AG+ + +LK + + +DG ++S E Sbjct: 32 GTPFYAYDRGAV-SARIAALRAALPAGMAIRYSLKANPMAALLAHMAPLVDGFDAASAGE 90 Query: 63 VMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + G +I + ++ ++ +++++ + + + Sbjct: 91 LRAGLAVGMAPAALSIAGPGKSPADILSAVAAGALVVVESLAEVGRVAQAGNASGLRPRV 150 Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKD------KIESEIKNVNGLMFHNNCENKSFL 173 + + +R G I + + GL + Sbjct: 151 LVRVNPEAEIQGAGLRMGGGARPFGIDADQVPGVLAAIAAHDLDYQGLHCFWGSQALDAE 210 Query: 174 CFSAMLKNIEKEFGHFI--TQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV 227 + + + I +GGG + + E + Sbjct: 211 RIARAFAVVGQTLLDLAGPRPPRQIVIGGGFGIPYTPTSAPLDLARAGAAVAETAGLLGD 270 Query: 228 QIY-----LEPGEAIVTNTTTLNTTVLDISENIKNLV-------IVDSSVEAHVPDYLLY 275 + LE G +V + + + NL + + + + Sbjct: 271 HLPGVSLGLELGRFLVGEAGVYVCAIRESKRSRGNLFLVTDGGLHHNQAATGNFGQVVRR 330 Query: 276 QESATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK- 331 I G A + G C D+F E GD ++ Y + Sbjct: 331 PYPLVIATRMGEPVSERATITGCLCTPLDVFAEALAIPAAAEGDLVAIFQSGAYGASASP 390 Query: 332 NWFNGINMPTIAVK 345 + F G + Sbjct: 391 SAFLGHPPAVELLV 404 >gi|294634821|ref|ZP_06713345.1| diaminopimelate decarboxylase [Edwardsiella tarda ATCC 23685] gi|291091789|gb|EFE24350.1| diaminopimelate decarboxylase [Edwardsiella tarda ATCC 23685] Length = 122 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 30/114 (26%), Gaps = 14/114 (12%) Query: 265 VEAHVPDYLLYQESATIYPNTGPY-------TAMVCGRSCLAGDIFGEF-------HFEK 310 + + +V G C +GD+F + Sbjct: 5 FNDLMRPAMYGSHHHISLLARDGRALSGPLIETVVGGPLCESGDVFTQREGGTVTACALP 64 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 ++GD + F D Y + + +N + + G R + + Sbjct: 65 AAQVGDWLVFHDTGAYGASMSSNYNSRPLLPEVLVTEQGVTLIRRRQRMEELFA 118 >gi|332185823|ref|ZP_08387570.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Sphingomonas sp. S17] gi|332014181|gb|EGI56239.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Sphingomonas sp. S17] Length = 411 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 36/332 (10%), Positives = 81/332 (24%), Gaps = 25/332 (7%) Query: 26 KNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNV---AY 81 + + + A+K + + L ++S+ EV L + + Sbjct: 53 EKFPGRPMYAVKANPSPDLIQILWDNGITHFDTASIAEVRLVKSVAPQAVCCFMHPVKSE 112 Query: 82 KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS 141 + T +++ +L K Q S S Sbjct: 113 EAIAEAYFTHGVRTYSLDSMEELEKIVRATQGATDLTLCVRMRVSSEY-----AKLSLGS 167 Query: 142 RLGEKCKD-----KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWI 196 + G ++ ++ + G+ FH + + +SA ++ + ++ I Sbjct: 168 KFGVSLEESKDLLIATRQVADALGICFHVGSQTMTPDAYSAAMERVRAAIVAAAVTVDVI 227 Query: 197 SLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +GGG + + + E L + ++ Sbjct: 228 DVGGGFPSAYPGMTPPPLERFFETIHRAFESLPVSYSAELWAEPGRALCAEYSSVVVRVE 287 Query: 257 NLVIVDSSVEA-----HVPDYLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIF-GE 305 + + + + G +C D G Sbjct: 288 RRRGNELYINDGAYGALFDAAHIGWKYPVQLLREPDSDARDMDFSFWGPTCDDLDFMQGP 347 Query: 306 FHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 F GD + Y + FNG Sbjct: 348 FPLPADTNTGDYFEIGMLGAYGQAMRTQFNGF 379 >gi|300697287|ref|YP_003747948.1| diaminopimelate decarboxylase [Ralstonia solanacearum CFBP2957] gi|299074011|emb|CBJ53548.1| putative diaminopimelate decarboxylase [Ralstonia solanacearum CFBP2957] Length = 428 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 60/393 (15%), Positives = 120/393 (30%), Gaps = 40/393 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 TP ++ + +L+ N+ AG V + + A + L G Sbjct: 37 GTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFPNANPHILKPLRDEGAGILLQ 96 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E L + + + + + ++ L++ ++ I Sbjct: 97 MPNEYKLITQYGFSDFIV---SPGHVSNEEIAFWSKKHYPVFLASLDEIAYAIRENAPTI 153 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 +RI+ S I D + + + + + N Sbjct: 154 SVRIDSLGSDKPGIKVDQLG-------SLAQMLSASGRTLECFEVYCGSGNSLQGMIDIA 206 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKYSVQ--- 228 + HF I+ GG F + + + Q +++ + + + Sbjct: 207 RQIFRMYLDHF-PTARSINFAGGHGFNYEKWSETEKHFDWTTYFQAIRDLATEMKIPETV 265 Query: 229 -IYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESAT------ 280 EPG ++ + L T + DI ++ ++V +P L S Sbjct: 266 KFMFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSRMLMPSAQLRNRSHNTVFLDS 325 Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + +A V GRS L D GE +K G+ + DV Y + F Sbjct: 326 AFNEVVDYSKRCSAKVRGRSILRNDYILPGEVVAPGTIKAGEYMLILDVGAYCATQHMEF 385 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN-DYYNNL 366 + + DGTI + + + D + NL Sbjct: 386 LNVPPAGEVLVEADGTIYMVTKPGNDLDKWRNL 418 >gi|207724408|ref|YP_002254805.1| orn/dap/arg decarboxylase 2; protein [Ralstonia solanacearum MolK2] gi|206589629|emb|CAQ36590.1| orn/dap/arg decarboxylase 2; protein [Ralstonia solanacearum MolK2] Length = 428 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 125/393 (31%), Gaps = 40/393 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 TP ++ + +L+ N+ AG V + + A + L G Sbjct: 37 GTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFPNANPHILKPLRDEGAGILLQ 96 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E L + + + + E A S +F ++ L++ ++ I Sbjct: 97 MPNEYKLITQYGFSDFIV-SPGHVSNEEIAFWSQKHYPVF--LASLDEIAYAVRENAPTI 153 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 +RI+ S I D + + +++ + N Sbjct: 154 SVRIDSLGSDKPGIKVDQLG-------SLAQMLSASGRSLECFEVYCGSGNSLQGMIDIA 206 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKYSVQ--- 228 + HF I+ GG F + + + Q +++ + + + Sbjct: 207 RQIFRMYLDHF-PTARSINFAGGHGFNYEKWSESEKHFDWTTYFQAIRDLATEMKIPETV 265 Query: 229 -IYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESAT------ 280 EPG ++ + L T + DI ++ ++V +P L S Sbjct: 266 KFMFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSRMLMPSAQLRNRSHNTVFLDS 325 Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I + A + GRS L D GE + +K G+ + DV Y + F Sbjct: 326 AFNEIVDYSRRCNAKIRGRSILRNDYILPGEVVAPETIKAGEYMLILDVGAYCATQHMEF 385 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN-DYYNNL 366 + + DGTI + + + D + NL Sbjct: 386 LNVPPAGEVLVEADGTIYMVTKPGNDLDKWRNL 418 >gi|222832227|gb|EEE70704.1| predicted protein [Populus trichocarpa] Length = 124 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 32/112 (28%), Gaps = 4/112 (3%) Query: 257 NLVIVDSSVEAHVPDYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 N IVD+++ + N V G C +GD G V+ Sbjct: 8 NFCIVDAAMNDLARPAMYEAFHRIEPVAPRNDAGVMYDVVGPVCESGDWLGRDRTLA-VQ 66 Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 GD ++ Y + +N + + D D + N Sbjct: 67 AGDLLAVMSAGAYGFVMSSNYNTRGRAAEVMVDGDTVHLVRERELPADLFRN 118 >gi|111225759|ref|YP_716553.1| putative diaminopimelate decarboxylase protein [Frankia alni ACN14a] gi|111153291|emb|CAJ65043.1| putative diaminopimelate decarboxylase protein [Frankia alni ACN14a] Length = 476 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 59/432 (13%), Positives = 109/432 (25%), Gaps = 90/432 (20%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT---------------LNQ 50 YL D N +L A+K + D L Sbjct: 38 AYLYDPTVAARNAAALRGCLPG-WAELCFAVKANGFPPVLDALLRGAAAAGTPADIQLAD 96 Query: 51 --------------------------------YMDGTTSSSLYEVMLGHEKFG------- 71 +DG SS+ E L +G Sbjct: 97 IRAHGPGAGGGPDPSVGPGASGGPDPRVCGHGGVDGFEVSSVGETRLALAAYGRVAPARS 156 Query: 72 GETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVS--- 127 A A + A++ + + +L + + A + +++ + + + + Sbjct: 157 PYLVASGPAKSSTLLTALVEAGVSIVNVESPGELRRLEAVAARFGRRVTVAVRVNPARVA 216 Query: 128 -----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK----SFLCFSAM 178 + P S + +V G H N Sbjct: 217 LAGSLQMGGRPSAFGVPESEVPAVLDLARRLPHLDVAGFHVHAVSGNLDAAAHLDYVRWC 276 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKD-------YPVKDFCQRLKEFSEKYSVQIYL 231 L+ E+ + + +GGG+ + + + F + L V++ + Sbjct: 277 LEFAERTAADAGIDLRVVDVGGGLGVPFEPDRRGERPFDLDRFGEGLARLPVPPGVRMII 336 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATIY------- 282 EPG +V + V+D+ + +V H +P + + Sbjct: 337 EPGRLLVADCGWYAAEVIDVKRSYGTDFVVLRGGIHHFALPTSWEIVHNFAVVAGPTSTA 396 Query: 283 -----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNG 336 +T V G C D PV+ GD + F Y F G Sbjct: 397 AEDKGVDTAGRPVTVVGELCTPEDTLARDITVGPVRPGDVVVFPMAGAYGYEFALADFLG 456 Query: 337 INMPTIAVKNVD 348 P V Sbjct: 457 HPRPARVVLGES 468 >gi|326917946|ref|XP_003205254.1| PREDICTED: antizyme inhibitor 1-like [Meleagris gallopavo] Length = 450 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 52/373 (13%), Positives = 114/373 (30%), Gaps = 33/373 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D KL+ + +K ++C + G+ + L G SS E+ L Sbjct: 40 FYVGDLGKLVKKNIQWQNVMAP--IKPFYTVRCNSTPGVLEILGTLGIGFACSSKSEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K + I S + K K+ L I Sbjct: 98 VQGLGISPENIIYTNPCKQASQIKYAAKAGINIMTCDSDIELKKIARNHPDAKLLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + + G+ FH + K + + + Sbjct: 158 EDITADEEMNMKFGTTLKNCRHLMECAKELGVQIVGVKFHVSGSCKELQTYIHAISDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 F F ++ + +GGG ++ ++ F ++ +++ EPG V Sbjct: 218 VFDMAEEFGFKMNMLDIGGGFTGSELQLEEVNHVIRPLLDVYFPKESGIEVIAEPGCYYV 277 Query: 239 TNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLY-------------------- 275 ++ TL ++ + + V+ + P + Y Sbjct: 278 SSAFTLAVNIIAKKAVDCDKLLPSGVEQARNDDEPVFTYYINDGVYGSFASKLSEKLNTN 337 Query: 276 -QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + + + + G SC D E + +GD + F+++ + ++ F Sbjct: 338 PEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELSVGDWLIFDNMGSGTLGEQSTF 397 Query: 335 NGINMPTIAVKNV 347 + P I Sbjct: 398 SDYQRPLIYYMMS 410 >gi|17548900|ref|NP_522240.1| putative diaminopimelate decarboxylase protein [Ralstonia solanacearum GMI1000] gi|17431150|emb|CAD17830.1| putative orn/dap/arg decarboxylase 2; protein [Ralstonia solanacearum GMI1000] Length = 428 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 124/393 (31%), Gaps = 40/393 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 TP ++ + +L+ N+ AG V + + A + L G Sbjct: 37 GTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFPNANPHILKPLRDEGAGILLQ 96 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E L + + + + E A S D +F ++ L++ ++ I Sbjct: 97 MPNEYKLITQYGFSDFIV-SPGHVSNEEIAFWSKKDYPVF--LASLDEIAYAIREHAPTI 153 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 +RI+ S I D + + +++ + N Sbjct: 154 SVRIDSLGSDKPGIKVDQLG-------DLAKLLSANGRSLECFEVYCGSGNSLQGMIDIA 206 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKYSVQ--- 228 + HF I+ GG F + + + Q +++ + + + Sbjct: 207 RQIFRMYLDHF-PTARSINFAGGHGFDYEKWSEAEKHFDWATYFQAIRDLATEMKIPETV 265 Query: 229 -IYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 EPG ++ + L T + DI ++ ++V +P L + Sbjct: 266 RFLFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSRMLMPSAQLRNRAHHTVFLDA 325 Query: 287 PYT----------AMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + A V GRS L D G+ + VK G+ + DV Y + F Sbjct: 326 AFNEVVDYSRRCVAKVRGRSILRNDYILPGDVVAPETVKAGEYMLILDVGAYCATQHMEF 385 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN-DYYNNL 366 + + DG I + + + D + NL Sbjct: 386 LNVPPAGEVLVEADGAIYMVTKPGNDLDKWRNL 418 >gi|260576326|ref|ZP_05844317.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sp. SW2] gi|259021397|gb|EEW24702.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sp. SW2] Length = 381 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 92/349 (26%), Gaps = 19/349 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P L + L + A+K + + L+ G +S E+ Sbjct: 23 PVMFFSPAVLQASARRFLDGFPG---LVTYAVKSNPEEVVIENLSAAGIRGFDVASPAEM 79 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + YN + AV ++ S K + + + Sbjct: 80 RMIRRLCPDAAMHYNNPVRARSEIAVAVGLGVKSYSVDSASELAKLIELVPAENCEITVR 139 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-VNGLMFHNNCENKSFLCFSAMLKNI 182 + S + + + + + FH + + A ++ Sbjct: 140 FKLPVSGAAYNFGAKFGATVELATSLLKTVAAAGFIPSITFHPGTQCTDPHAWEAYIRAA 199 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK-------EFSEKYSVQIYLEPGE 235 + I +++GGG V + E + EPG Sbjct: 200 AQIAADAGVTIARLNVGGGFPNHRLHGVVPQLDATFELIDRVTGEAFGDDRPLLVCEPGR 259 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG------PYT 289 + + TL T V + ++ + + + + G Sbjct: 260 GLCGDAFTLATRVKALRDDAHVFLNDGVYGALAELPLVGVIDRIAVISPEGARREGTEVP 319 Query: 290 AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337 +V G +C + D + GD + F+ + Y+ FNG Sbjct: 320 RIVFGPTCDSVDRLPGDVLLADDLAEGDYVVFQGMGAYSCATNTRFNGF 368 >gi|148285643|gb|ABQ57511.1| LolD [Epichloe festucae] Length = 404 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 90/351 (25%), Gaps = 36/351 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ A+K + TL G +S E+ L Sbjct: 33 FFVADLNDVVRKWAAWKEAL--PDATPFFAVKSSYDRRLIQTLATCGAGFDCASAEEIEL 90 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122 G E + K + I F+ +L K + + + Sbjct: 91 TLSLGIGAERIIFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHHHYPEAQTVLRIFA 150 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH----NNCENKSFLCFSAM 178 + + G ++ + G FH + +++ Sbjct: 151 DDPTNADPLGTKFGAARNDFDG--LVRLVKELNMQLAGASFHAAPSVAVDAAAYVRGIRD 208 Query: 179 LKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + + +GGG + + ++I EPG Sbjct: 209 AAEVFARARQVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFTSQVGEGRLRILAEPG 268 Query: 235 EAIVTNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQE 277 + L V L I++ I + ++ V + +E Sbjct: 269 TLFSCSPFYLAVKVVARRVNATAFGHEPATRLYINDGIYSNFMMRFIVNMTFSPTAVIRE 328 Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVA 324 + GRSC + D V +GD + F+D+ Sbjct: 329 GVWHDQADHTMRGEACSLWGRSCDSNDCINRDCRLGMKVGVGDWLVFKDMG 379 >gi|307250856|ref|ZP_07532784.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857106|gb|EFM89234.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 201 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 5/150 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERRWHAFDKAFGSHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ ++++L++ + A +L K Sbjct: 86 LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC 147 I LR+NP V ++ G Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSV 175 >gi|237797831|ref|ZP_04586292.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020681|gb|EGI00738.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 96 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 9/79 (11%), Positives = 22/79 (27%), Gaps = 1/79 (1%) Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + G C GD + + GD ++ Y + +N + Sbjct: 12 EARAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLV 70 Query: 346 NVDGTIKAIREFSYNDYYN 364 + + R + + + Sbjct: 71 DGTQAFEVRRRETVAELFA 89 >gi|328684732|gb|AEB33799.1| hypothetical protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 201 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 46/150 (30%), Gaps = 5/150 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERRWHAFDKAFGSHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ ++++L++ + A +L K Sbjct: 86 LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC 147 I LR+NP ++ G Sbjct: 146 ISLRVNPDADAHTHPYISTGLKENKFGVSV 175 >gi|307262063|ref|ZP_07543717.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|45825285|gb|AAS77492.1| unknown [Actinobacillus pleuropneumoniae] gi|306868242|gb|EFN00065.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 201 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 5/150 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ ++++L++ + A +L K Sbjct: 86 LERVLAAGGKPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC 147 I LR+NP V ++ G Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSV 175 >gi|300693591|ref|YP_003749564.1| diaminopimelate decarboxylase [Ralstonia solanacearum PSI07] gi|299075628|emb|CBJ34924.1| putative diaminopimelate decarboxylase [Ralstonia solanacearum PSI07] Length = 428 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 127/393 (32%), Gaps = 40/393 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 TP ++ + +L+ N+ AG V + + A + L G Sbjct: 37 GTPVFIYSEAQLIRNIRRVKAAISAAGLDGRVSIFVPFFPNANPHVLKPLRDEGAGILLQ 96 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E L + + + + E A S + +F ++ L++ + I Sbjct: 97 MPNEYTLITQYGFSDFIV-SPGHVSNEEIAFWSKKNYPVF--LASLDEISYAIHENAPTI 153 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 +R++ S I D + + ++ + + + N Sbjct: 154 SVRVDSLGSDKPGIKVDQLG-------SLAEMLSAKGRTLECFEVYCGSGNSLQGMIDIA 206 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKYSVQ--- 228 + + HF I+ GG F + + K + Q +++ + + + Sbjct: 207 RQIFQMYLDHF-PTARSINFAGGHGFNYEKWSEAEKHFDWKTYFQAIRDLAAEMKIPETV 265 Query: 229 -IYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESAT------ 280 EPG ++ + L T + DI ++ ++V +P L S Sbjct: 266 KFMFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSRMLMPSAQLRNRSHNTVFLDS 325 Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 I ++ A V GRS L D GE + VK G+ + DV Y + F Sbjct: 326 AFNEIVNDSKRCNAKVRGRSILRNDYILPGEVVAPETVKAGEYMLILDVGAYCATQHMEF 385 Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN-DYYNNL 366 + + +G I + + D + NL Sbjct: 386 LNVPPAGEVLVEANGAIYMVTKPGNELDKWRNL 418 >gi|311063677|ref|YP_003970402.1| diaminopimelate decarboxylase [Bifidobacterium bifidum PRL2010] gi|310865996|gb|ADP35365.1| LysA Diaminopimelate decarboxylase [Bifidobacterium bifidum PRL2010] Length = 542 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 70/259 (27%), Gaps = 34/259 (13%) Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEW 195 L S+ + G+ H F M+ + + + Sbjct: 280 GPALAVLKDILTRSDELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPE 339 Query: 196 ISLGGGIHFTDKDYPVKDFCQ-----------RLKEFSEKYSVQIYLEPGEAIVTNTTTL 244 + LGGG D + + + I EPG IV Sbjct: 340 VDLGGGYSVAYTDGEDSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVT 399 Query: 245 NTTVLDISENI--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTG 286 V I + V VD + ++ L + A + Sbjct: 400 LYRVGTIKPVHLSDAKDKTGNPIDERVYVSVDGGMSDNIRPALYGADYTVRLANRRGSDE 459 Query: 287 PYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 V G C +GDI E ++ GD ++ Y + +N +P + Sbjct: 460 SMLVRVVGMHCESGDIIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAV 519 Query: 346 NVDGTIKAIREFSYNDYYN 364 + G IR + +D + Sbjct: 520 SEAGAHVMIRRQTIDDLLD 538 Score = 79.4 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 44/154 (28%), Gaps = 9/154 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID ++ N+ + A K F + + + + Sbjct: 45 GSPLYLIDTDEVSARARYFVRAAADAFTNSTTHVSFAGKAFLSKEVVRLVIDAGMLVDTC 104 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S+ E+ + G + K + I+ + + + A++L Sbjct: 105 SMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFAKIVVDEPGEPARIAAIARRLG 164 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147 K+ LR+ + + G Sbjct: 165 KRARVMLRVTAGIHAGGHEYISTAHEDQKFGVPL 198 >gi|310286781|ref|YP_003938039.1| diaminopimelate decarboxylase [Bifidobacterium bifidum S17] gi|309250717|gb|ADO52465.1| diaminopimelate decarboxylase [Bifidobacterium bifidum S17] Length = 548 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 70/259 (27%), Gaps = 34/259 (13%) Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEW 195 L S+ + G+ H F M+ + + + Sbjct: 286 GPALAVLKDILTRSDELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPE 345 Query: 196 ISLGGGIHFTDKDYPVKDFCQ-----------RLKEFSEKYSVQIYLEPGEAIVTNTTTL 244 + LGGG D + + + I EPG IV Sbjct: 346 VDLGGGYSVAYTDGEDSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVT 405 Query: 245 NTTVLDISENI--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTG 286 V I + V VD + ++ L + A + Sbjct: 406 LYRVGTIKPVHLSDAKDKTGNPIDERVYVSVDGGMSDNIRPALYGADYTVRLANRRGSDE 465 Query: 287 PYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 V G C +GDI E ++ GD ++ Y + +N +P + Sbjct: 466 SMLVRVVGMHCESGDIIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAV 525 Query: 346 NVDGTIKAIREFSYNDYYN 364 + G IR + +D + Sbjct: 526 SEAGAHVMIRRQTIDDLLD 544 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 44/154 (28%), Gaps = 9/154 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID ++ N+ + A K F + + + + Sbjct: 51 GSPLYLIDTDEVSARARYFVRAAADAFTNSTTHVSFAGKAFLSKEVVRLVTDAGMLVDTC 110 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S+ E+ + G + K + I+ + + + A++L Sbjct: 111 SMGEMRIVLAAGVPGRRLVLHGNNKSDAEIELAIEQGFAKIVVDEPDEPARIAAIARRLG 170 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147 K+ LR+ + + G Sbjct: 171 KRARVMLRVTAGIHAGGHEYISTAHEDQKFGVPL 204 >gi|255524070|ref|ZP_05391031.1| Diaminopimelate decarboxylase [Clostridium carboxidivorans P7] gi|255512207|gb|EET88486.1| Diaminopimelate decarboxylase [Clostridium carboxidivorans P7] Length = 238 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 16/208 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y++D+ + + + G++ ++ A K F + + + S Sbjct: 30 GTPLYVVDEDLVRSTCREFKDNFEIEGIESEVIYASKAFLNLAIAKVICEEGLSLDVVSG 89 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116 E+ F + K A+ + I+ + ++L + + L+K Sbjct: 90 GELYTALKANFPVSRIYMHGNNKTEGELSMAIEAGIGRIVVDNRNELEVIEYLCKSLNKK 149 Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166 + LR+NP + ++ S+ GE D SE N G H Sbjct: 150 VDVLLRVNPGIEAHTHEYIQTSKNDSKFGESIFDEDMCKIINRFQNSESVNFKGFHCHIG 209 Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIE 194 + F + + ++ K + Sbjct: 210 SQIFEEKSFYSEVSDMIKFLEKIKKSMR 237 >gi|313139481|ref|ZP_07801674.1| diaminopimelate decarboxylase [Bifidobacterium bifidum NCIMB 41171] gi|313131991|gb|EFR49608.1| diaminopimelate decarboxylase [Bifidobacterium bifidum NCIMB 41171] Length = 519 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 69/259 (26%), Gaps = 34/259 (13%) Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEW 195 L S+ + G+ H F M+ + + + Sbjct: 257 GPALAVLKDILTRSDELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPE 316 Query: 196 ISLGGGIHFTDKDYPVKDFCQ-----------RLKEFSEKYSVQIYLEPGEAIVTNTTTL 244 + LGGG D + + + I EPG IV Sbjct: 317 VDLGGGYSVAYTDGEDSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVT 376 Query: 245 NTTVLDISENI--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTG 286 V I + V VD + ++ L + A + Sbjct: 377 LYRVGTIKPVHLSDAKDKTGNPIDERVYVSVDGGMSDNIRPALYGADYTVRLANRRGSDE 436 Query: 287 PYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 V G C +GDI E ++ GD ++ Y + +N +P + Sbjct: 437 SMLVRVVGMHCESGDIIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAV 496 Query: 346 NVDGTIKAIREFSYNDYYN 364 G IR + +D + Sbjct: 497 TEAGAHVMIRRQTIDDLLD 515 Score = 79.4 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 45/154 (29%), Gaps = 9/154 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID ++ N+ + A K F + + + + Sbjct: 22 GSPLYLIDTDEVSARARYFVRAAADAFTNSTTHVSFAGKAFLSKEVVRLVTDAGMLVDTC 81 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S+ E+ + G + K + I+ + + ++ A++L Sbjct: 82 SMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFAKIVVDEPDEPSRIAAIARRLG 141 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147 K+ LR+ + + G Sbjct: 142 KRARVMLRVTAGIHAGGHEYISTAHEDQKFGVPL 175 >gi|224282335|ref|ZP_03645657.1| diaminopimelate decarboxylase [Bifidobacterium bifidum NCIMB 41171] Length = 537 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 69/259 (26%), Gaps = 34/259 (13%) Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEW 195 L S+ + G+ H F M+ + + + Sbjct: 275 GPALAVLKDILTRSDELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPE 334 Query: 196 ISLGGGIHFTDKDYPVKDFCQ-----------RLKEFSEKYSVQIYLEPGEAIVTNTTTL 244 + LGGG D + + + I EPG IV Sbjct: 335 VDLGGGYSVAYTDGEDSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVT 394 Query: 245 NTTVLDISENI--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTG 286 V I + V VD + ++ L + A + Sbjct: 395 LYRVGTIKPVHLSDAKDKTGNPIDERVYVSVDGGMSDNIRPALYGADYTVRLANRRGSDE 454 Query: 287 PYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 V G C +GDI E ++ GD ++ Y + +N +P + Sbjct: 455 SMLVRVVGMHCESGDIIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAV 514 Query: 346 NVDGTIKAIREFSYNDYYN 364 G IR + +D + Sbjct: 515 TEAGAHVMIRRQTIDDLLD 533 Score = 79.4 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 45/154 (29%), Gaps = 9/154 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID ++ N+ + A K F + + + + Sbjct: 40 GSPLYLIDTDEVSARARYFVRAAADAFTNSTTHVSFAGKAFLSKEVVRLVTDAGMLVDTC 99 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S+ E+ + G + K + I+ + + ++ A++L Sbjct: 100 SMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFAKIVVDEPDEPSRIAAIARRLG 159 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147 K+ LR+ + + G Sbjct: 160 KRARVMLRVTAGIHAGGHEYISTAHEDQKFGVPL 193 >gi|163757172|ref|ZP_02164274.1| diaminopimelate decarboxylase [Kordia algicida OT-1] gi|161322900|gb|EDP94247.1| diaminopimelate decarboxylase [Kordia algicida OT-1] Length = 124 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 32/104 (30%), Gaps = 4/104 (3%) Query: 265 VEAHVPDYLL--YQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 + L Y I G V G C D FG ++ GD + F Sbjct: 3 FNHLIRPMLYNSYHHIENISNPAGRERYYSVVGYICET-DTFGNNRRISEIREGDILKFN 61 Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365 + Y + + +N P + + + +++D N Sbjct: 62 NAGAYCFSMASNYNSRYRPAEVLWFNNEAHLIRKRETFDDILKN 105 >gi|332808532|ref|XP_524555.3| PREDICTED: arginine decarboxylase [Pan troglodytes] Length = 392 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 47/366 (12%), Positives = 113/366 (30%), Gaps = 64/366 (17%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ +KC ++ G+ L Q G + + Sbjct: 41 FFVADLGAIVR--KHFCFLKCLPRVQPFYTVKCNSSPGVLKVLAQLGLGFSCA------- 91 Query: 66 GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125 + + + Q+ + + Sbjct: 92 -------------NKLCEAHSRRDCRSTVEETMGS-----AIWFVQQRGTACLIRMVLCI 133 Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLCFSAMLKNI 182 + L+ + F + C+ +E+ KN V G+ FH ++ + + Sbjct: 134 ATDDSHSLSCLSLKFGVSLKSCRHLLENAKKNHAEVVGVSFHIGSGCPDPQAYAQSIADA 193 Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEP 233 F ++ + LGGG T+ + + F E V I+ E Sbjct: 194 RLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAEL 253 Query: 234 GEAIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVP 270 G VT+ T+ +++ + I +S + ++ Sbjct: 254 GRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNIC 313 Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 + Q+ + Y++ + G + D E + + +GD + F+++ Y + Sbjct: 314 PTPILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGM 371 Query: 331 KNWFNG 336 + F G Sbjct: 372 GSPFGG 377 >gi|325180947|emb|CCA15357.1| pyridoxaldependent decarboxylase putative [Albugo laibachii Nc14] Length = 1659 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 54/399 (13%), Positives = 111/399 (27%), Gaps = 53/399 (13%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 + D + + + + + A+K + G +S+ EV Sbjct: 1244 VYDLNAIDSAIQSLKSSFP-THFEHRFAMKTCPLSFFIKKAIENHIGIECASVIEVKHAL 1302 Query: 68 E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI------- 118 Y + E+ LS + + +L+ + + Sbjct: 1303 RLGCPPHQIVYNSPCKTRNELAFALSAGVDVNADNFEELDIITELVLACFQPESKLDQIP 1362 Query: 119 --GLRINPSVSYSKFILADPNRPFSRLGEKC-----KDKI--ESEIKNVNGLMFHNNCEN 169 LRINP V + + S+ G I + + + GL H + Sbjct: 1363 RICLRINPLVGAGHNAILSTSTRTSKFGVTLTTENRARIITYFRDNQWLAGLHCHVGSQG 1422 Query: 170 KSFLCFSAMLKNIEK------EFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLK 219 S + + + +I +++GGG+ ++ LK Sbjct: 1423 CSLELLAKGAAALCELSDDIERLTSTSKRIRVLNIGGGLPVNYSASESTPTFAEYANVLK 1482 Query: 220 EF----SEKYSVQIYLEPGEAIVTNTTTLNTTVLD-----------ISENIKNLVIVDSS 264 + +K I E G++I + + T V I E IV + Sbjct: 1483 KCAPQLFDKNDRTIITEFGQSISAKSGWIVTQVEYVKSLGEDTLSEIPEAAYQTAIVHAG 1542 Query: 265 VEAHVP--------DYLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIG 315 + + + A + + G C GD+ G ++ Sbjct: 1543 SDLFLRACYRPDLFPVRISVYQANGNASENEEMLQNIAGPLCFGGDLVGRSILVPRIERN 1602 Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 D + D I+ + P + + DG + + Sbjct: 1603 DLLVMHDTGANTISLFSRHCSRAAPCVYGYHTDGNGELV 1641 >gi|307702981|ref|ZP_07639928.1| protein tabA [Streptococcus oralis ATCC 35037] gi|307623374|gb|EFO02364.1| protein tabA [Streptococcus oralis ATCC 35037] Length = 321 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 84/297 (28%), Gaps = 26/297 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N G K A+K + L + G SS Sbjct: 19 PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILKEEGCGVDCSSYV 78 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+++ H+ F G ++ D E TI + + + A Sbjct: 79 ELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---------SEIKNVN-GLMFHNNCEN 169 V + D ++ G E ++ ++ L + Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228 + + + +++I+L GGI + + + E K + Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAVIGEGVRKVYEEV 257 Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLL 274 I+ E G ++ L T V + + + P + Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKPTVPIWAWMHQQSTSCAPPCME 314 >gi|255023624|ref|ZP_05295610.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-208] Length = 117 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 5/108 (4%) Query: 265 VEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + ++ L + T + G+ C +GD+ G+ ++ Sbjct: 9 MSDNIRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAV 68 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367 Y + +N I P + + +Y + N LS Sbjct: 69 FCTGAYGYAMASNYNRIPRPPVVFVENGIDKLIVARETYENLVQNDLS 116 >gi|320459348|dbj|BAJ69969.1| putative diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 518 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%) Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205 ++ + G H F M+ + + + I LGGG Sbjct: 265 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 324 Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 D + I EPG IV V I Sbjct: 325 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHV 384 Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296 + V VD + ++ L + A + A VCG Sbjct: 385 HLSDVKDSAGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 444 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI +K GD ++ Y + +N +P + + G +R Sbjct: 445 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 504 Query: 356 EFSYNDYYN 364 + +D N Sbjct: 505 RQTVDDLLN 513 Score = 79.8 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 47/157 (29%), Gaps = 9/157 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID +++ + + A K F + + + + + Sbjct: 22 GSPLYLIDTDEVVARARHFVRAAAEAFDTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 81 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K E A+ I+ + + + A++L Sbjct: 82 TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARRLG 141 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 K+ LR+ V + G Sbjct: 142 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 178 >gi|296454952|ref|YP_003662096.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. longum JDM301] gi|296184384|gb|ADH01266.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. longum JDM301] Length = 530 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%) Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205 ++ + G H F M+ + + + I LGGG Sbjct: 277 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 336 Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 D + I EPG IV V I Sbjct: 337 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHV 396 Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296 + V VD + ++ L + A + A VCG Sbjct: 397 HLSDAKDSAGNPITERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 456 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI +K GD ++ Y + +N +P + + G +R Sbjct: 457 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 516 Query: 356 EFSYNDYYN 364 + +D N Sbjct: 517 RQTVDDLLN 525 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 9/157 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID ++ + + A K F + + + + + Sbjct: 34 GSPLYLIDTDEVSARAKHFVRAAAEAFNTSTTHVSFAGKAFLSKEIVRLVTEAGMFVDTC 93 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K E A+ I+ + + + A+KL Sbjct: 94 TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 153 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 K+ LR+ V + G Sbjct: 154 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 190 >gi|213693167|ref|YP_002323753.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524628|gb|ACJ53375.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 530 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%) Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205 ++ + G H F M+ + + + I LGGG Sbjct: 277 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 336 Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 D + I EPG IV V I Sbjct: 337 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHV 396 Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296 + V VD + ++ L + A + A VCG Sbjct: 397 HLSDVKDSAGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 456 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI +K GD ++ Y + +N +P + + G +R Sbjct: 457 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 516 Query: 356 EFSYNDYYN 364 + +D N Sbjct: 517 RQTVDDLLN 525 Score = 79.8 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 47/157 (29%), Gaps = 9/157 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID +++ + + A K F + + + + + Sbjct: 34 GSPLYLIDTDEVVARARHFVRAAAEAFDTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 93 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K E A+ I+ + + + A++L Sbjct: 94 TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARRLG 153 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 K+ LR+ V + G Sbjct: 154 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 190 >gi|189440468|ref|YP_001955549.1| diaminopimelate decarboxylase [Bifidobacterium longum DJO10A] gi|189428903|gb|ACD99051.1| Diaminopimelate decarboxylase [Bifidobacterium longum DJO10A] Length = 530 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%) Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205 ++ + G H F M+ + + + I LGGG Sbjct: 277 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 336 Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 D + I EPG IV V I Sbjct: 337 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHV 396 Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296 + V VD + ++ L + A + A VCG Sbjct: 397 HLSDAKDSAGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 456 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI +K GD ++ Y + +N +P + + G +R Sbjct: 457 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 516 Query: 356 EFSYNDYYN 364 + +D N Sbjct: 517 RQTVDDLLN 525 Score = 79.4 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 47/157 (29%), Gaps = 9/157 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID +++ + + A K F + + + + + Sbjct: 34 GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 93 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K E A+ I+ + + + A++L Sbjct: 94 TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARRLG 153 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 K+ LR+ V + G Sbjct: 154 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 190 >gi|46190675|ref|ZP_00121234.2| COG0019: Diaminopimelate decarboxylase [Bifidobacterium longum DJO10A] Length = 518 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%) Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205 ++ + G H F M+ + + + I LGGG Sbjct: 265 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 324 Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 D + I EPG IV V I Sbjct: 325 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHV 384 Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296 + V VD + ++ L + A + A VCG Sbjct: 385 HLSDAKDSAGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 444 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI +K GD ++ Y + +N +P + + G +R Sbjct: 445 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 504 Query: 356 EFSYNDYYN 364 + +D N Sbjct: 505 RQTVDDLLN 513 Score = 79.4 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 47/157 (29%), Gaps = 9/157 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID +++ + + A K F + + + + + Sbjct: 22 GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 81 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K E A+ I+ + + + A++L Sbjct: 82 TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARRLG 141 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 K+ LR+ V + G Sbjct: 142 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 178 >gi|213513938|ref|NP_001133877.1| Antizyme inhibitor 1 [Salmo salar] gi|209155670|gb|ACI34067.1| Antizyme inhibitor 1 [Salmo salar] Length = 449 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/377 (12%), Positives = 107/377 (28%), Gaps = 35/377 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D L+ + A++ ++ + + L G ++ YE+ L Sbjct: 40 FFVADLGVLMRQHVRWRTHMPQM--RPFYAVQANSSLAVIEILAALSTGFICTNKYELEL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E Y+ K A + D ++ + ++L K K+ L + Sbjct: 98 VQGYGVPSEDIIYSGVCKQLSQIKYAAKNGIDFLVCDNEAELRKIAR--CHPRAKLLLEV 155 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 S + + + + V G+ FH +S + + Sbjct: 156 ATEASSEGEEMGMMFGSKLKDCRHLLESAKELGLQVVGVRFHVPSTCDDPQAYSHAVSDA 215 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYL-EPGEA 236 F + + +GGG + ++ + L + S + EPG Sbjct: 216 RCVFDMGEDIGFSMTILDIGGGFNGSETQLKQINSAVRPLLDLYFPASSGVSIMAEPGSY 275 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY-------------------QE 277 V+++ TL ++ ++L + LY Sbjct: 276 YVSSSFTLAVNIIAKEVGARDLHGNHDEPSPNDEPEFLYYMNDGVYGSFTSKLADNVIPA 335 Query: 278 SATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 A + G S D + + +GD + F + Y + ++ F Sbjct: 336 PALPKSGVSEEPVFASSLWGPSGDELDQVVDQCLLPELSVGDWLIFNNAGAYCLGPQSTF 395 Query: 335 NGINMPTIAVKNVDGTI 351 P + G Sbjct: 396 TDSTRPPVYYTISTGDW 412 >gi|303249621|ref|ZP_07335827.1| hypothetical protein APP6_1029 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302651554|gb|EFL81704.1| hypothetical protein APP6_1029 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 201 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 5/150 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMVRLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ ++++L++ + A +L K Sbjct: 86 LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC 147 I LR+NP V ++ G Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSV 175 >gi|294634823|ref|ZP_06713346.1| diaminopimelate decarboxylase [Edwardsiella tarda ATCC 23685] gi|291091759|gb|EFE24320.1| diaminopimelate decarboxylase [Edwardsiella tarda ATCC 23685] Length = 305 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 94/289 (32%), Gaps = 29/289 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + +DT + A K + + + Q + SL E Sbjct: 25 GTPLWIYDAGVISRQIDTLRQFD-----TIRFAQKACSNLHILRLMRQAGVRVDAVSLGE 79 Query: 63 VMLG-HEKF--GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + F GG+ + D + + + L + ++A + Sbjct: 80 IERALLAGFQPGGDEIVFTADVIDEATLDRVCALAIPVNAGSCDMLRQLGERA--PGHPV 137 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSF 172 LRINP + + S+ G +D I++ + GL H + Sbjct: 138 WLRINPGFGHGHSQKTNTGGENSKHGIWHQDLDQALALIDAYDLRLVGLHMHIGSGVD-Y 196 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223 + + + + I+ IS GGG+ + Y R + + Sbjct: 197 DHLARVCDTLANQAIALGRDIQAISAGGGLSIPYRADEQSVDVTHYFGLWDAARRRIAAH 256 Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVP 270 + V++ +EPG +V + L V + ++ V+ D+ + Sbjct: 257 LGHPVRLEIEPGRYLVAQSGLLMAEVRAVKTMGQRHFVLADAGFNDLMR 305 >gi|167901191|ref|ZP_02488396.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei NCTC 13177] Length = 398 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 113/378 (29%), Gaps = 37/378 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP Y+ D Q +L + G +L+++LK + + + + DG +S Sbjct: 25 LDTPCYVFDPQCVLASYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + + N A D + A +++ I + + +F A + + Sbjct: 82 GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175 + + ++ L D + + + V GL N Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201 Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 A ++ QIE ++LGGG D + + K Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271 ++ E G AI N T V + ++ V +H Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330 L+ +A + G +C D+ G + + GD + F Y+ + Sbjct: 321 TLVPAGTADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380 Query: 331 K-NWFNGINMPTIAVKNV 347 + F P Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397 >gi|317482967|ref|ZP_07941971.1| diaminopimelate decarboxylase [Bifidobacterium sp. 12_1_47BFAA] gi|316915574|gb|EFV36992.1| diaminopimelate decarboxylase [Bifidobacterium sp. 12_1_47BFAA] Length = 530 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%) Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205 ++ + G H F M+ + + + I LGGG Sbjct: 277 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 336 Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 D + I EPG IV V I Sbjct: 337 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 396 Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296 + V VD + ++ L + A + A VCG Sbjct: 397 HLSDAKDSDGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 456 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI +K GD ++ Y + +N +P + + G +R Sbjct: 457 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 516 Query: 356 EFSYNDYYN 364 + +D N Sbjct: 517 RQTVDDLLN 525 Score = 81.7 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 9/157 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID +++ + + A K F + + + + + Sbjct: 34 GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEIVRLVAEAGMFVDTC 93 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K E A+ I+ + + + A+KL Sbjct: 94 TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 153 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 K+ LR+ V + G Sbjct: 154 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 190 >gi|312133790|ref|YP_004001129.1| lysa [Bifidobacterium longum subsp. longum BBMN68] gi|311773073|gb|ADQ02561.1| LysA [Bifidobacterium longum subsp. longum BBMN68] Length = 530 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%) Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205 ++ + G H F M+ + + + I LGGG Sbjct: 277 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 336 Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 D + I EPG IV V I Sbjct: 337 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 396 Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296 + V VD + ++ L + A + A VCG Sbjct: 397 HLSDAKDSDGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 456 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI +K GD ++ Y + +N +P + + G +R Sbjct: 457 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 516 Query: 356 EFSYNDYYN 364 + +D N Sbjct: 517 RQTVDDLLN 525 Score = 79.4 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 9/157 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID +++ + + A K F + + + + + Sbjct: 34 GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 93 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K E A+ I+ + + + A+KL Sbjct: 94 TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 153 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 K+ LR+ V + G Sbjct: 154 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 190 >gi|239620903|ref|ZP_04663934.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|322690013|ref|YP_004209747.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis 157F] gi|239516164|gb|EEQ56031.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|320461349|dbj|BAJ71969.1| putative diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis 157F] Length = 518 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%) Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205 ++ + G H F M+ + + + I LGGG Sbjct: 265 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 324 Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 D + I EPG IV V I Sbjct: 325 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 384 Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296 + V VD + ++ L + A + A VCG Sbjct: 385 HLSDAKDSDGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 444 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI +K GD ++ Y + +N +P + + G +R Sbjct: 445 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 504 Query: 356 EFSYNDYYN 364 + +D N Sbjct: 505 RQTVDDLLN 513 Score = 79.4 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 9/157 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID +++ + + A K F + + + + + Sbjct: 22 GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 81 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K E A+ I+ + + + A+KL Sbjct: 82 TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 141 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 K+ LR+ V + G Sbjct: 142 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 178 >gi|227547000|ref|ZP_03977049.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212532|gb|EEI80421.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 532 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%) Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205 ++ + G H F M+ + + + I LGGG Sbjct: 279 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 338 Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 D + I EPG IV V I Sbjct: 339 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 398 Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296 + V VD + ++ L + A + A VCG Sbjct: 399 HLSDAKDSDGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 458 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI +K GD ++ Y + +N +P + + G +R Sbjct: 459 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 518 Query: 356 EFSYNDYYN 364 + +D N Sbjct: 519 RQTVDDLLN 527 Score = 79.8 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 9/157 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID +++ + + A K F + + + + + Sbjct: 36 GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEIVRLVTEAGMFVDTC 95 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K E A+ I+ + + + A+KL Sbjct: 96 TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 155 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 K+ LR+ V + G Sbjct: 156 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 192 >gi|23465835|ref|NP_696438.1| diaminopimelate decarboxylase [Bifidobacterium longum NCC2705] gi|23326532|gb|AAN25074.1| probable diaminopimelate decarboxylase [Bifidobacterium longum NCC2705] Length = 530 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%) Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205 ++ + G H F M+ + + + I LGGG Sbjct: 277 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 336 Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 D + I EPG IV V I Sbjct: 337 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 396 Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296 + V VD + ++ L + A + A VCG Sbjct: 397 HLSDAKDSDGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 456 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI +K GD ++ Y + +N +P + + G +R Sbjct: 457 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 516 Query: 356 EFSYNDYYN 364 + +D N Sbjct: 517 RQTVDDLLN 525 Score = 79.4 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 9/157 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID +++ + + A K F + + + + + Sbjct: 34 GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 93 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K E A+ I+ + + + A+KL Sbjct: 94 TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 153 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 K+ LR+ V + G Sbjct: 154 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 190 >gi|322510630|gb|ADX05944.1| putative ornithine decarboxylase [Organic Lake phycodnavirus 1] Length = 370 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 119/361 (32%), Gaps = 33/361 (9%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT----LNQYMDGTTSSSLYE 62 ++ D++ +L ++ + ++ A+KC ++ + T + G +SL E Sbjct: 22 WIYDEKNVLRQIEQWNK--QLPWIRPYYAMKCNPSYDLLKTLTTRMKYNNIGLCVASLQE 79 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 +L + TH + N ++ ++ Q + + + + I Sbjct: 80 FLLAQKY----THNIIYTNPHMILYEKKHLFKLFNQNCFKVVDTMEELEQFIGRNVNVLI 135 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180 + + + E + ++ N+N G+ H ++ + K Sbjct: 136 KMNSCNHNINSSLDTKFGCTSPEAYELIHYAKQHNINIRGVSVHIESKSNCKQSYIDAYK 195 Query: 181 NIEKEFGHFITQIEWI-----SLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 +++ + + +GGG+ + V + + + +I E G Sbjct: 196 YVKQILEYLSMSCVYPEQPILDIGGGLLYNTNLEEVLGWTKYI-------HYEIIAETGR 248 Query: 236 AIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP------- 287 + L T ++ I + + + D+ + + A Y + Sbjct: 249 YYAEPSYHLLTEIIAKTRRGIFLDNGIYHELNVYHRDHWEFPKLAYYYDHEKDSLEKVME 308 Query: 288 -YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + G +C + D G F K +GD I E++ Y FNGI + + N Sbjct: 309 YEDTRIFGPTCDSYDHMGICSFPKDYNMGDHIFLENMGAYTNAGSCNFNGILGASCVLFN 368 Query: 347 V 347 Sbjct: 369 K 369 >gi|310831136|ref|YP_003969779.1| putative ornithine decarboxylase [Cafeteria roenbergensis virus BV-PW1] gi|309386320|gb|ADO67180.1| putative ornithine decarboxylase [Cafeteria roenbergensis virus BV-PW1] Length = 354 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 112/322 (34%), Gaps = 17/322 (5%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAV 89 +K A+K F L++Y G +SL E+ + + A + A Sbjct: 29 IKPYYAIKSFQNQDFLKFLSKYDVGFDCASLEEINYVKDYNNSKIFANPTKSIRDILVAK 88 Query: 90 LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD 149 +N + I+ +++ ++ K + + I + + S +F P E + Sbjct: 89 NNNINDIVIDSIEEIQKIQSINFNPNYIIRITSDEIFSTIRFNKKFGAYPDE--VENIIN 146 Query: 150 KIESEIKNVNGLMFHNNCEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT 205 I N+ G +H + + +L N + + I +GGG Sbjct: 147 YISDNNLNLKGFSYHVGSKCSNMTSHVNSINIILNNYLPQCFYKNLTPNLIDIGGGFESD 206 Query: 206 DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---- 261 + + Q L ++++ EPG + T ++ I E I + + Sbjct: 207 IQLLELNQKIQHLLPTLNNLNIKLIAEPGRLFSQGAVEVETEIIAIRERIIDNIKTLYLT 266 Query: 262 -----DSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGD 316 S + + D + + + G++C + D+ E K+GD Sbjct: 267 INDSVYHSFQGKIFDGQSFNPLPCYQSDE-LIRCFIFGQTCDSLDLIVENCIMPYPKLGD 325 Query: 317 RISFEDVAGYNINRKN-WFNGI 337 +I F+++ Y++ FNG Sbjct: 326 KIIFKNMGAYSLASATGNFNGF 347 >gi|126439778|ref|YP_001057577.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 668] gi|126453032|ref|YP_001064825.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1106a] gi|167844188|ref|ZP_02469696.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei B7210] gi|242316206|ref|ZP_04815222.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 1106b] gi|254196485|ref|ZP_04902909.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei S13] gi|254296043|ref|ZP_04963500.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 406e] gi|126219271|gb|ABN82777.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 668] gi|126226674|gb|ABN90214.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 1106a] gi|157805839|gb|EDO83009.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 406e] gi|169653228|gb|EDS85921.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei S13] gi|242139445|gb|EES25847.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 1106b] Length = 398 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 113/378 (29%), Gaps = 37/378 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP Y+ D Q +L + G +L+++LK + + + + DG +S Sbjct: 25 LDTPCYVFDPQCVLASYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + + N A D + A +++ I + + +F A + + Sbjct: 82 GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175 + + ++ L D + + + V GL N Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201 Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 A ++ QIE ++LGGG D + + K Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271 ++ E G AI N T V + ++ V +H Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330 L+ +A + G +C D+ G + + GD + F Y+ + Sbjct: 321 TLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380 Query: 331 K-NWFNGINMPTIAVKNV 347 + F P Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397 >gi|207722229|ref|YP_002252665.1| siderophore synthesis decarboxylase protein [Ralstonia solanacearum MolK2] gi|207728412|ref|YP_002256806.1| siderophore synthesis decarboxylase 'partial sequence n terminus) protein [Ralstonia solanacearum MolK2] gi|206587405|emb|CAQ17987.1| putative siderophore synthesis decarboxylase protein [Ralstonia solanacearum MolK2] gi|206591658|emb|CAQ57270.1| probable siderophore synthesis decarboxylase 'partial sequence n terminus) protein [Ralstonia solanacearum MolK2] Length = 364 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 75/273 (27%), Gaps = 28/273 (10%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 YL D L G +L A+K + + L+ + G +SL EV Sbjct: 19 AYLYDLDHLRERAGRL-SAMLPPGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVAR 77 Query: 66 GHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E + K + I + QL + A ++ ++ + + Sbjct: 78 AREVGAHARIVFGGPGKTDAELQCALERGVELIHVESELQLRRLDAVACRMGRRARVLLR 137 Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 + + + + + V GL H Sbjct: 138 VNPNPLSADSAGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLARGLAGVKVVGLHLHALSN 197 Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220 N L + ++ +++GGGI + + FC L Sbjct: 198 NLDADSHLALVRHYLALALRLRREHGLTLDTLNVGGGIGVDYAQPSQAFDWRRFCDGLGT 257 Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDI 251 + +I E G I + T V+DI Sbjct: 258 LLAEAGAGCRIVFECGRFIAADCGYYVTEVVDI 290 >gi|148252725|ref|YP_001237310.1| putative diaminopimelate decarboxylase [Bradyrhizobium sp. BTAi1] gi|146404898|gb|ABQ33404.1| putative diaminopimelate decarboxylase [Bradyrhizobium sp. BTAi1] Length = 173 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 51/161 (31%), Gaps = 8/161 (4%) Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHV 269 + +K S + EPG IV N L V+ + KN VI+D+++ + Sbjct: 6 NPAYAAMVKRVSHNLGCTLMFEPGRMIVGNAGILVANVIYVKHGEAKNFVIIDAAMNDLI 65 Query: 270 PDYLLYQESATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 LY+ I P P +TA V G C +GD GD ++ Sbjct: 66 RPT-LYEAHHDILPVVQPAPGAPSFTADVVGPVCESGDYLALDRTLPEPAPGDLLAIMTS 124 Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 Y + +N + + D Sbjct: 125 GAYGAVQACTYNTRALVPEVLVKGDQAAVIRPRIEVEQLIA 165 >gi|217419424|ref|ZP_03450930.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 576] gi|217396728|gb|EEC36744.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 576] Length = 390 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 113/378 (29%), Gaps = 37/378 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP Y+ D Q +L + G +L+++LK + + + + DG +S Sbjct: 17 LDTPCYVFDPQCVLASYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 73 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + + N A D + A +++ I + + +F A + + Sbjct: 74 GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 133 Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175 + + ++ L D + + + V GL N Sbjct: 134 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 193 Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 A ++ QIE ++LGGG D + + K Sbjct: 194 GGDADSADLAWALAQLAEQIEALVRTPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 253 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271 ++ E G AI N T V + ++ V +H Sbjct: 254 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAILKTWAAP 312 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330 L+ +A + G +C D+ G + + GD + F Y+ + Sbjct: 313 TLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 372 Query: 331 K-NWFNGINMPTIAVKNV 347 + F P Sbjct: 373 TVSGFLSH-KPAQVYIRQ 389 >gi|53724490|ref|YP_104642.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei ATCC 23344] gi|67643476|ref|ZP_00442222.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei GB8 horse 4] gi|121599096|ref|YP_991480.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei SAVP1] gi|124385611|ref|YP_001027442.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei NCTC 10229] gi|126449890|ref|YP_001082408.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei NCTC 10247] gi|167001221|ref|ZP_02267020.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei PRL-20] gi|254175240|ref|ZP_04881901.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei ATCC 10399] gi|254201732|ref|ZP_04908096.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei FMH] gi|254207065|ref|ZP_04913416.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei JHU] gi|254357546|ref|ZP_04973820.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei 2002721280] gi|52427913|gb|AAU48506.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei ATCC 23344] gi|121227906|gb|ABM50424.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei SAVP1] gi|124293631|gb|ABN02900.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei NCTC 10229] gi|126242760|gb|ABO05853.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei NCTC 10247] gi|147747626|gb|EDK54702.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei FMH] gi|147752607|gb|EDK59673.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei JHU] gi|148026610|gb|EDK84695.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei 2002721280] gi|160696285|gb|EDP86255.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei ATCC 10399] gi|238524832|gb|EEP88263.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei GB8 horse 4] gi|243062942|gb|EES45128.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei PRL-20] Length = 398 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 112/378 (29%), Gaps = 37/378 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP Y+ D Q +L G +L+++LK + + + + DG +S Sbjct: 25 LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + + N A D + A +++ I + + +F A + + Sbjct: 82 GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175 + + ++ L D + + + V GL N Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201 Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 A ++ QIE ++LGGG D + + K Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271 ++ E G AI N T V + ++ V +H Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330 L+ +A + G +C D+ G + + GD + F Y+ + Sbjct: 321 TLVPAGTADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380 Query: 331 K-NWFNGINMPTIAVKNV 347 + F P Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397 >gi|167568677|ref|ZP_02361551.1| pyridoxal-dependent decarboxylase family protein [Burkholderia oklahomensis C6786] Length = 398 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 111/378 (29%), Gaps = 37/378 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP Y+ D Q +L G +L+++LK + + + + DG +S Sbjct: 25 LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + + N A D + A +++ I + + +F A + + Sbjct: 82 GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175 + + ++ L D + + + V GL N Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201 Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 A ++ QIE ++LGGG D + + K Sbjct: 202 GGDADSADLAWALAQLAEQIESLVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271 ++ E G AI N T V + ++ V +H Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWEAP 320 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330 L+ A + G +C D+ G + + GD + F Y+ + Sbjct: 321 TLVPAGPADAHRAPNTLPVTFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380 Query: 331 K-NWFNGINMPTIAVKNV 347 + F P Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397 >gi|189373|gb|AAA59968.1| ornithine decarboxylase (EC 4.1.1.17) [Homo sapiens] Length = 350 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 89/284 (31%), Gaps = 38/284 (13%) Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 K+ LRI S + L+ R ++ + +V G+ FH Sbjct: 35 HPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDP 94 Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSE 223 F + + F + + +GGG ++ + K F Sbjct: 95 ETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPS 154 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVL-------------------------DISENIKNL 258 V+I EPG V + TL ++ +++ + Sbjct: 155 DSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGS 214 Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 AHV L + Y++ + G +C D E + +GD + Sbjct: 215 FNCILYDHAHVKPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWM 270 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 FE++ Y + + FNG PTI + +++F D+ Sbjct: 271 LFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 314 >gi|291457070|ref|ZP_06596460.1| diaminopimelate decarboxylase [Bifidobacterium breve DSM 20213] gi|291380905|gb|EFE88423.1| diaminopimelate decarboxylase [Bifidobacterium breve DSM 20213] Length = 542 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%) Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205 ++ + G H F M+ + + + I LGGG Sbjct: 290 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 349 Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 D + I EPG IV V I Sbjct: 350 YTDGEDSMDIDVELTRLAGSVSDTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 409 Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRS 296 + V VD + ++ L + N T A VCG Sbjct: 410 HLSDAKDSAGNPIGERVYVSVDGGMSDNIRPALYGADYTARLANRTGSTETMLARVCGMH 469 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI +K GD ++ Y + +N +P + + G +R Sbjct: 470 CESGDIVVHEVRLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSEQGAHVMLR 529 Query: 356 EFSYNDYYN 364 + +D + Sbjct: 530 RQTIDDLLD 538 Score = 82.9 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 47/157 (29%), Gaps = 9/157 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID ++ + + A K F + + + + + Sbjct: 36 GSPLYLIDTDEVSARAKHFVRAAAEAFNTSTTHVSFAGKAFLSKEIVRLVAEAGMFVDTC 95 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K + A+ I+ + ++ + A+KL Sbjct: 96 TMGEMRIALAAGVPGRRLVLHGNNKSDDEIALAIEQGFAKIVVDEPNEPERIAAIARKLG 155 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 K+ LR+ V + G Sbjct: 156 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 192 >gi|53718125|ref|YP_107111.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei K96243] gi|167717961|ref|ZP_02401197.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei DM98] gi|167814089|ref|ZP_02445769.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 91] gi|167892695|ref|ZP_02480097.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 7894] gi|167917439|ref|ZP_02504530.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei BCC215] gi|52208539|emb|CAH34475.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei K96243] Length = 398 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 112/378 (29%), Gaps = 37/378 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP Y+ D Q +L G +L+++LK + + + + DG +S Sbjct: 25 LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + + N A D + A +++ I + + +F A + + Sbjct: 82 GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175 + + ++ L D + + + V GL N Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201 Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 A ++ QIE ++LGGG D + + K Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRTPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271 ++ E G AI N T V + ++ V +H Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330 L+ +A + G +C D+ G + + GD + F Y+ + Sbjct: 321 TLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380 Query: 331 K-NWFNGINMPTIAVKNV 347 + F P Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397 >gi|254187839|ref|ZP_04894351.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei Pasteur 52237] gi|157935519|gb|EDO91189.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei Pasteur 52237] Length = 398 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 112/378 (29%), Gaps = 37/378 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP Y+ D Q +L G +L+++LK + + + + DG +S Sbjct: 25 LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + + N A D + A +++ I + + +F A + + Sbjct: 82 GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175 + + ++ L D + + + V GL N Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201 Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 A ++ QIE ++LGGG D + + K Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271 ++ E G AI N T V + ++ V +H Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330 L+ +A + G +C D+ G + + GD + F Y+ + Sbjct: 321 TLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380 Query: 331 K-NWFNGINMPTIAVKNV 347 + F P Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397 >gi|39894|emb|CAA34876.1| unnamed protein product [Bacillus subtilis] Length = 327 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 86/281 (30%), Gaps = 37/281 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP Y+ D + + +AG ++ A K F++ M + S Sbjct: 32 GTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVS- 90 Query: 61 YE--VMLGHEKFGGETHAYNV------AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 E + L + F + A + I + + K Sbjct: 91 GESYIRLLQQAFRQNASTFMETIRAGKNCGWRLSTASAALWWIISMKSSLLEDL--CKET 148 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMF 163 + LRI P V + S+ G + ++SE + G+ Sbjct: 149 GHSIDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHC 208 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC---- 215 H + F + I K+ + + ++LGGG + Sbjct: 209 HIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIRYTEDDEPLHATEYV 268 Query: 216 ----QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVL 249 + +KE + +Y I++EPG ++V + T TV Sbjct: 269 EKIIEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVG 309 >gi|237810729|ref|YP_002895180.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei MSHR346] gi|237505916|gb|ACQ98234.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei MSHR346] Length = 398 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 112/378 (29%), Gaps = 37/378 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP Y+ D Q +L G +L+++LK + + + + DG +S Sbjct: 25 LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + + N A D + A +++ I + + +F A + + Sbjct: 82 GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175 + + ++ L D + + + V GL N Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201 Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 A ++ QIE ++LGGG D + + K Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271 ++ E G AI N T V + ++ V +H Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWEAP 320 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330 L+ +A + G +C D+ G + + GD + F Y+ + Sbjct: 321 TLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380 Query: 331 K-NWFNGINMPTIAVKNV 347 + F P Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397 >gi|134279558|ref|ZP_01766270.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 305] gi|167736984|ref|ZP_02409758.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 14] gi|167822612|ref|ZP_02454083.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 9] gi|226199536|ref|ZP_03795093.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei Pakistan 9] gi|254181907|ref|ZP_04888504.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1655] gi|134248758|gb|EBA48840.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 305] gi|184212445|gb|EDU09488.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1655] gi|225928417|gb|EEH24447.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei Pakistan 9] Length = 398 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 112/378 (29%), Gaps = 37/378 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP Y+ D Q +L G +L+++LK + + + + DG +S Sbjct: 25 LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + + N A D + A +++ I + + +F A + + Sbjct: 82 GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175 + + ++ L D + + + V GL N Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201 Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 A ++ QIE ++LGGG D + + K Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271 ++ E G AI N T V + ++ V +H Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330 L+ +A + G +C D+ G + + GD + F Y+ + Sbjct: 321 TLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380 Query: 331 K-NWFNGINMPTIAVKNV 347 + F P Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397 >gi|114576091|ref|XP_001156876.1| PREDICTED: ornithine decarboxylase 1 isoform 2 [Pan troglodytes] Length = 332 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 89/284 (31%), Gaps = 38/284 (13%) Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 K+ LRI S + L+ R ++ + +V G+ FH Sbjct: 17 HPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDP 76 Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSE 223 F + + F + + +GGG ++ + K F Sbjct: 77 ETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPS 136 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVL-------------------------DISENIKNL 258 V+I EPG V + TL ++ +++ + Sbjct: 137 DSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGS 196 Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 AHV L + Y++ + G +C D E + +GD + Sbjct: 197 FNCILYDHAHVKPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWM 252 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 FE++ Y + + FNG PTI + +++F D+ Sbjct: 253 LFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 296 >gi|6562332|emb|CAB62550.1| diaminopimelate decarboxylase [Arabidopsis thaliana] Length = 145 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 50/140 (35%), Gaps = 7/140 (5%) Query: 232 EPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT- 289 E G +++ NT V + N KN +++D S+ + L + P Sbjct: 1 ELGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPPEA 60 Query: 290 ----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 V G C + D G+ G + D Y ++ + +N P Sbjct: 61 EVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKMRPPEYWV 120 Query: 346 NVDGTIKAIRE-FSYNDYYN 364 DG+I IR +++D+ Sbjct: 121 EEDGSITKIRHAETFDDHLR 140 >gi|126642606|ref|YP_001085590.1| putative ornithine decarboxylase [Acinetobacter baumannii ATCC 17978] Length = 325 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 99/320 (30%), Gaps = 28/320 (8%) Query: 44 MFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNT 100 M + L + +S+ E+ A+ K + ++ Sbjct: 1 MIERLCRIGSSFDLASVNELKKVQAFGVDASRLAFGNTIKKRADIQYFYEQGIRLYVTDS 60 Query: 101 VSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN- 159 + LN A L I+ + + ++++ + Sbjct: 61 DADLNNIAQYAPGSKVFFRLSID---GSETADWPLSGKFGCNAECVIRLAVKAKELGLIP 117 Query: 160 -GLMFHNNCENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF 214 G+ FH + + + + L + F ++ ++LGGG+ Sbjct: 118 YGISFHVGSQQRKIDLWDSALAETKAIFDVLVNDHQIHLKMLNLGGGLPAQYVQQTEAFA 177 Query: 215 C------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDS 263 L+ F QI LEPG ++V N L + ++ IS+ + + Sbjct: 178 SYSKQINAALEMFKPYQLEQIILEPGRSLVGNAGILVSEIVLISQRPQSGTKRWVYTDVG 237 Query: 264 SVEAHVPDYLLYQESATIYPNTGP-YTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRIS 319 + + + TG ++ G +C + DI ++ ++IGD + Sbjct: 238 VFNGLIETLGEAIQYPIVCKKTGQSDDIILAGPTCDSMDIMYQNKKYELPLSLEIGDHLY 297 Query: 320 FEDVAGYNINRKN-WFNGIN 338 + Y + + FNG Sbjct: 298 WLSTGAYTTSYSSIEFNGFP 317 >gi|167561446|ref|ZP_02354362.1| pyridoxal-dependent decarboxylase family protein [Burkholderia oklahomensis EO147] Length = 398 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 111/378 (29%), Gaps = 37/378 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP Y+ D Q +L G +L+++LK + + + + DG +S Sbjct: 25 LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + + N A D + A +++ I + + +F A + + Sbjct: 82 GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175 + + ++ L D + + + V GL N Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201 Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 A ++ QIE ++LGGG D + + K Sbjct: 202 GGDADSADLAWALAQLAEQIESLVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271 ++ E G AI N T V + ++ V +H Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWEAP 320 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330 L+ A + G +C D+ G + + GD + F Y+ + Sbjct: 321 TLVPAGPADAHRAPNALPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380 Query: 331 K-NWFNGINMPTIAVKNV 347 + F P Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397 >gi|88601236|gb|ABD46616.1| diaminopimelate decarboxylase-like protein [Glaucocystis nostochinearum] Length = 162 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 4/153 (2%) Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPD 271 +K+ + I +EPG +IV NT L V + N IV A + Sbjct: 5 HLIDTIKDLILANDIGIMVEPGRSIVGNTGMLVNKVTGVKTNGNKNFIVTDGSMAELIRP 64 Query: 272 YLLYQ--ESATIYPNTGPY-TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 L I P +G + G C + D G+ G I+ D Y+ Sbjct: 65 SLYDAFMYIDFIEPVSGAEKEFDIVGPVCESADFLGKDRMLPTPPEGAGIAVFDAGAYSY 124 Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 + +N P + + D + S ++ Sbjct: 125 CMSSNYNMKMRPPEYLVDGDKVTLIRKGESLDE 157 >gi|114764907|ref|ZP_01444080.1| Putative Ornithine decarboxylase [Pelagibaca bermudensis HTCC2601] gi|114542619|gb|EAU45643.1| Putative Ornithine decarboxylase [Roseovarius sp. HTCC2601] Length = 375 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 93/347 (26%), Gaps = 28/347 (8%) Query: 23 YIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNVAY 81 + A+K M + L + +S E+ L + Y+ Sbjct: 38 RFLDGFPGVVSYAVKANPLPEMIEGLWRAGLRVFDVASPAEMALVRAQCPEAVLHYHNPV 97 Query: 82 KDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139 + + C + + +S+L K + L++ + + F P Sbjct: 98 RSQAEVSAGLAHRCVSWSVDRMSELEKLAALPAGTEIAVRLKLPVAGAAYDFGAKFGAEP 157 Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLG 199 + + ++ FH + + ++ + + +++G Sbjct: 158 AGAVTLLRRVAEMGLTPSLT---FHPGTQCRGAEPWARYIHAAAGVARDAGVTLHRLNVG 214 Query: 200 GGIHFTDKD-----YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 GG + + R + + EPG + L V + Sbjct: 215 GGFPSDRGEGEPDLETIFATIGRATREAFPRPPDLVCEPGRGLCAEAFLLALKVKAVEAE 274 Query: 255 IKNLVIVDSSVEAHVPDYLLYQE-----SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309 + A D + A +V G +C + D E Sbjct: 275 ALFVNDGIYGSMAEWRDLGMAGRVRVVDPAGRRRGGRAQPRIVFGPTCDSLDRLPEPMAL 334 Query: 310 KP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 ++ GD + E + Y+ FNG G + +R Sbjct: 335 PAAIEEGDFVICEGMGAYSRALVTGFNGY-----------GARRVVR 370 >gi|301114639|ref|XP_002999089.1| pyridoxal-dependent decarboxylase, putative [Phytophthora infestans T30-4] gi|262111183|gb|EEY69235.1| pyridoxal-dependent decarboxylase, putative [Phytophthora infestans T30-4] Length = 1199 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 49/388 (12%), Positives = 110/388 (28%), Gaps = 54/388 (13%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 + D + L + A+K + G +S+ EV Sbjct: 784 VYDLDAIDMAFQALLTSFP-VHFEHRFAMKSCPLSFFIKRAIENDVGLECASIVEVKHAL 842 Query: 68 E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--------- 116 + + ++ + + + +L+ ++ A+ + + Sbjct: 843 RLGCPPHRIVFDSPCKTRRDLQFAIIAGVEVNADNFDELDIIREHAEAIFQSSFPECTPR 902 Query: 117 ------KIGLRINPSVSYSKFILADPNRPFSRLGEKC-----KDKIESEIKN--VNGLMF 163 +IGLRINP + + S+ G I N + GL Sbjct: 903 YAGNLPRIGLRINPLLGAGANSCLSVSTVQSKFGVPLTAENRARIIAFFCANPYMTGLHA 962 Query: 164 HNNCENKSFLCFSAMLK-----NIEKEFGHFITQIEWISLGGGIH-FTDKDYPVKDFCQR 217 H + S S E + ++I+ +++GGG+ D + F + Sbjct: 963 HVGSQGCSLEMLSQGAVVLSELANEIDAAAGTSRIKVLNIGGGLSTNFDDEEVSPTFAEY 1022 Query: 218 LK-------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD------SS 264 ++ + ++ I E G ++ + T + + V + + + + Sbjct: 1023 VEVLRREAPQLFKRTGRTILTEFGSSVSSKTGWVVSEVEYVKAHPQVDGDDLTQTAIIHA 1082 Query: 265 VEAHVPDYLLYQ---------ESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKI 314 + + P + V G C GD+ G + Sbjct: 1083 GSDLFLRACYRPELFARRMSVYNPAGLVSMAPVSVQNVAGPLCFGGDMVGRRVELPTISQ 1142 Query: 315 GDRISFEDVAGYNINRKNWFNGINMPTI 342 GD + D ++ + P + Sbjct: 1143 GDFVVVHDTGANTMSMFSRHCSRPAPAV 1170 >gi|54026837|ref|YP_121079.1| hypothetical protein nfa48630 [Nocardia farcinica IFM 10152] gi|54018345|dbj|BAD59715.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 489 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 63/418 (15%), Positives = 120/418 (28%), Gaps = 84/418 (20%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + TP++L+ ++ N+ AGV + K A + + G +S Sbjct: 85 VGTPFHLLAPARVRANIAAFQVAFTTAGVDGYVYYGKKANKAACVARACAEQGAGVDVAS 144 Query: 60 LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 + E+ + G E A D + + + + V +L + A + Sbjct: 145 VGELTAALAQGVRGPELMVTGPAKSDELLWLATRHGAVVAVDAVDELER--MVAAGFDTR 202 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNN-CENK 170 + LR+ P S SR G ++ + + G FH E Sbjct: 203 VLLRVLPPAS------------DSRFGMTDEELDRALTLLAGTRIRLAGFSFHLGGYEAS 250 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------------------------ 206 + +A+L + IS+GGG Sbjct: 251 ARAELAAVLVERCVRARAEGHAADTISIGGGFGVDYVPAQAWAAFTAAAGPAWFHAGKSF 310 Query: 207 -KDYPVKDF-------CQRLKEF-----SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 YP + L+ +++ +EPG A++ V Sbjct: 311 DSYYPYHFPVPGAAMLAEILRHGGLAELLRGNGIRLAIEPGRALLDRAGCTVFGVRGAKT 370 Query: 254 NIKNLVIVDSSVEA--------------HVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + +PD LL+ P V SCL Sbjct: 371 RHAHGRPYRLLTVDGTSLSLSEQWFASEFLPDPLLWPTRPG-----APTPTCVGATSCLE 425 Query: 300 GDIFGEFH--FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAI 354 D+ + + GD + + + AGY ++ + F+ + +P V + + Sbjct: 426 SDMLSWRRIPLPRAAEPGDLLVYPNTAGYQMDSNESAFHELPIPPKVVLHETDGGRLR 483 >gi|207109674|ref|ZP_03243836.1| diaminopimelate decarboxylase [Helicobacter pylori HPKX_438_CA4C1] Length = 113 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 4/104 (3%) Query: 265 VEAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + + L + + A V G C + D F + ++ GD+I+ Sbjct: 1 MNDFLRPSLYHAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKDVHLPELEPGDKIAI 60 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 E V Y + + +N + + D + Sbjct: 61 EKVGAYGSSMASQYNSRPKLLELALEDHKIRVIRKREALEDLWR 104 >gi|83778339|gb|ABC47117.1| ornithine decarboxylase [Fusarium solani] Length = 312 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 77/310 (24%), Gaps = 30/310 (9%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY 77 + + V+ A+KC + L + G +S E+ + Y Sbjct: 2 QHLRWKKNLPRVRPFYAVKCNPDTQIIKLLAELGTGFDCASKAEIEQVLSLGLSPDRIIY 61 Query: 78 NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN 137 K + + +K ++ LRI S S + Sbjct: 62 AQPCKTNSYVRYVKTAGVKQMTFDNSDELYKIAKLYPGAELFLRIMTDDSESMCRFSMKF 121 Query: 138 RPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIE 194 E + NV G+ FH L F +++ F + Sbjct: 122 GAAMETAEGLLALAKHLGLNVIGVSFHVGSGASDPLAFYKAVRDAHTVFQQARELGFDMR 181 Query: 195 WISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--- 250 + +GGG T + + F V I EPG V T+ ++ Sbjct: 182 TLDVGGGFSGDTFETMAEVLREALDEFFPPGCGVDIMAEPGRYYVATAFTIACNIIARRT 241 Query: 251 ------------ISENIKNLVIVDSSVEAHVPDYL----------LYQESATIYPNTGPY 288 + N + V H SA P Sbjct: 242 VEDPTLDGKGYMVYVNDGVYGNFSNIVFDHQTPVAKILRASGKTLYETPSAHPVPTGEGV 301 Query: 289 TAMVCGRSCL 298 + G +C Sbjct: 302 EYSIWGPTCD 311 >gi|229817125|ref|ZP_04447407.1| hypothetical protein BIFANG_02383 [Bifidobacterium angulatum DSM 20098] gi|229784914|gb|EEP21028.1| hypothetical protein BIFANG_02383 [Bifidobacterium angulatum DSM 20098] Length = 529 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 65/248 (26%), Gaps = 35/248 (14%) Query: 151 IESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTD 206 ++ + G+ H F M+ + + + + LGGG Sbjct: 276 RHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAY 335 Query: 207 KDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 D + + I EPG IV V + Sbjct: 336 TDGEDSMDIDAELGRLSQAVSSINRALGMPAPVISFEPGRWIVAPAGVTLYRVGTVKPVQ 395 Query: 256 KNLVIVDSSVE---------------AHVPDYLLYQESATIYPNTG----PYTAMVCGRS 296 + D + ++ L + A N + V G Sbjct: 396 LSGDATDKAGNPVTERVYVSVDGGMSDNIRPALYGADYAVKLANRKGSDETKLSRVVGMH 455 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI +K GD ++ Y + +N +P + + G IR Sbjct: 456 CESGDIIVHECQLPADIKRGDVLAVPVTGAYGRTMASNYNQALIPAVVGVSEAGAHVMIR 515 Query: 356 EFSYNDYY 363 + +D Sbjct: 516 RQTIDDLL 523 Score = 82.9 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 47/154 (30%), Gaps = 9/154 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID ++ + N + A K F + + + + Sbjct: 34 GSPLYLIDTDEVRQRAERFVRAAASAFDNTVTHVSFAGKAFLSKEICRIVTGAGMLIDTC 93 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S+ E+ + G + K E A+ I+ + ++ + A+K+ Sbjct: 94 SMGEMRIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPNEPARIAQIARKMG 153 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147 K+ LR+ + + G Sbjct: 154 KRARVMLRVTSGIHAGGHEFISTAHEDQKFGVSL 187 >gi|67968709|dbj|BAE00713.1| unnamed protein product [Macaca fascicularis] Length = 332 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 89/284 (31%), Gaps = 38/284 (13%) Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 K+ LRI S + L+ R ++ + +V G+ FH Sbjct: 17 HPKAKLVLRIATDDSKAVCRLSVKFGATLRNSRLLLERAKELNIDVVGVSFHVGSGCTDP 76 Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSE 223 F + + F + + +GGG ++ + K F Sbjct: 77 ETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITNVINPALDKYFPA 136 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVL-------------------------DISENIKNL 258 V+I EPG V + TL ++ +++ + Sbjct: 137 DSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGS 196 Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 AHV L + Y++ + G +C D E + +GD + Sbjct: 197 FNCILYDHAHVKPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWM 252 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 FE++ Y + + FNG PTI + +++F D+ Sbjct: 253 LFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 296 >gi|289177558|gb|ADC84804.1| Diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis BB-12] Length = 589 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 68/253 (26%), Gaps = 35/253 (13%) Query: 147 CKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGI 202 ++ + + G+ H F M+ + + + + LGGG Sbjct: 332 LREIAKYGNLELVGVHSHIGSNIHDAEAFIQAAKRMMLLRKTFYATNAYTLPEVDLGGGY 391 Query: 203 HFTDKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 D + R + I EPG IV V + Sbjct: 392 SVAYTDDEDRMDVDRELGRLADAVSKTNRLLGMPAPIISFEPGRWIVAPAGVTLYRVGTV 451 Query: 252 SENIKNLVIVDSS---------------VEAHVPDYLLYQESATIYPN----TGPYTAMV 292 +++ + ++ L + I N + V Sbjct: 452 KTVQLGDGFTNNAGERIRERAYISVDGGMSDNIRPALYDAKYTAILANRESAEPAKLSRV 511 Query: 293 CGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 G C +GDI V GD ++ Y + + +N +P + + G Sbjct: 512 VGIHCESGDIVVNEANLPADVHRGDILAVPVTGAYGRSMASNYNMALIPAVVGIDGHGAH 571 Query: 352 KAIREFSYNDYYN 364 +R + +D Sbjct: 572 VMMRRQTIDDLLA 584 Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 9/154 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P Y++D ++ + N + A K F + M + + + Sbjct: 94 GSPLYVLDLDEVRARASHFVKAAAHAFTNNTTHVSYAAKAFLSKEMARIVTEEGMFVDTC 153 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 +L E+ + G + K E + I+ ++ + + A++L Sbjct: 154 TLGEMKIALAAGVPGRRLVLHGNNKSDEEIELAIAEGFSKIVIDSPDEPARIAAIAERLG 213 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147 K+ LR+ + + G Sbjct: 214 KRARVMLRVTSGIHAGGHEYVSTAHEDQKFGVAL 247 >gi|183602800|ref|ZP_02964163.1| probable diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis HN019] gi|219683103|ref|YP_002469486.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis AD011] gi|241191433|ref|YP_002968827.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196839|ref|YP_002970394.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218038|gb|EDT88686.1| probable diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis HN019] gi|219620753|gb|ACL28910.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis AD011] gi|240249825|gb|ACS46765.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251393|gb|ACS48332.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794426|gb|ADG33961.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis V9] Length = 529 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 68/253 (26%), Gaps = 35/253 (13%) Query: 147 CKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGI 202 ++ + + G+ H F M+ + + + + LGGG Sbjct: 272 LREIAKYGNLELVGVHSHIGSNIHDAEAFIQAAKRMMLLRKTFYATNAYTLPEVDLGGGY 331 Query: 203 HFTDKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 D + R + I EPG IV V + Sbjct: 332 SVAYTDDEDRMDVDRELGRLADAVSKTNRLLGMPAPIISFEPGRWIVAPAGVTLYRVGTV 391 Query: 252 SENIKNLVIVDSS---------------VEAHVPDYLLYQESATIYPN----TGPYTAMV 292 +++ + ++ L + I N + V Sbjct: 392 KTVQLGDGFTNNAGERIRERAYISVDGGMSDNIRPALYDAKYTAILANRESAEPAKLSRV 451 Query: 293 CGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 G C +GDI V GD ++ Y + + +N +P + + G Sbjct: 452 VGIHCESGDIVVNEANLPADVHRGDILAVPVTGAYGRSMASNYNMALIPAVVGIDGHGAH 511 Query: 352 KAIREFSYNDYYN 364 +R + +D Sbjct: 512 VMMRRQTIDDLLA 524 Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 9/154 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P Y++D ++ + N + A K F + M + + + Sbjct: 34 GSPLYVLDLDEVRARASHFVKAAAHAFTNNTTHVSYAAKAFLSKEMARIVTEEGMFVDTC 93 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 +L E+ + G + K E + I+ ++ + + A++L Sbjct: 94 TLGEMKIALAAGVPGRRLVLHGNNKSDEEIELAIAEGFSKIVIDSPDEPARIAAIAERLG 153 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147 K+ LR+ + + G Sbjct: 154 KRARVMLRVTSGIHAGGHEYVSTAHEDQKFGVAL 187 >gi|76810875|ref|YP_332123.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1710b] gi|254258627|ref|ZP_04949681.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1710a] gi|76580328|gb|ABA49803.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1710b] gi|254217316|gb|EET06700.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1710a] Length = 398 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 112/378 (29%), Gaps = 37/378 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP Y+ D Q +L G +L+++LK + + + + DG +S Sbjct: 25 LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + + N A D + A +++ I + + +F A + + Sbjct: 82 GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175 + + ++ L D + + + V GL N Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201 Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225 A ++ QIE ++LGGG D + + K Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRTPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271 ++ E G AI N T V + ++ V +H Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320 Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330 L+ +A + G +C D+ G + + GD + F Y+ + Sbjct: 321 TLVPAGAADAHRAPNVRPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380 Query: 331 K-NWFNGINMPTIAVKNV 347 + F P Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397 >gi|212715296|ref|ZP_03323424.1| hypothetical protein BIFCAT_00188 [Bifidobacterium catenulatum DSM 16992] gi|212661753|gb|EEB22328.1| hypothetical protein BIFCAT_00188 [Bifidobacterium catenulatum DSM 16992] Length = 529 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 33/249 (13%), Positives = 63/249 (25%), Gaps = 35/249 (14%) Query: 151 IESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTD 206 ++ + G+ H F M+ + + + + LGGG Sbjct: 276 RHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAY 335 Query: 207 KDYPVKDF-----------CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 D + + I EPG V T V + Sbjct: 336 TDGEDSMDLDTELARLASAVTTVNRALGMPAPVISFEPGRWTVAPTGVTLYRVGTVKPVQ 395 Query: 256 KNLVIVDSSVE---------------AHVPDYLLY----QESATIYPNTGPYTAMVCGRS 296 D + ++ L + A ++ V G Sbjct: 396 LAGTAKDKAGNPVTERVYVSVDGGMSDNIRPALYGSDYTAKIANREGSSETKLCRVVGMH 455 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI ++ GD ++ Y + +N +P + + IR Sbjct: 456 CESGDIIVNEVRLPADIQRGDVLAVPVTGAYGRTMASNYNQALIPAVVAVSEQDAHVMIR 515 Query: 356 EFSYNDYYN 364 + D + Sbjct: 516 RQTVEDLLD 524 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 44/154 (28%), Gaps = 9/154 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P Y+ID + N + A K + + + + + Sbjct: 37 GSPLYVIDTDDVRVRATKFVKSAANAFNNTVTHVSFAGKALLSKEICRIVTESGMLIDTC 96 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K + I+ + ++ + + A++L Sbjct: 97 TMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAITEGFAKIVVDEPNEPARIAEIAKRLG 156 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147 K+ LR+ + + G Sbjct: 157 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 190 >gi|149390765|gb|ABR25400.1| diaminopimelate decarboxylase [Oryza sativa Indica Group] Length = 97 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 T + G C + D G+ G + D Y ++ + +N P D Sbjct: 14 TFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKLRPPEYWVEDD 73 Query: 349 GTIKAIRE-FSYND---YYNNLS 367 G+I IR S++D +++NLS Sbjct: 74 GSIAKIRRGESFDDYMKFFDNLS 96 >gi|322691946|ref|YP_004221516.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456802|dbj|BAJ67424.1| putative diaminopimelate decarboxylase [Bifidobacterium longum subsp. longum JCM 1217] Length = 518 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%) Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205 ++ + G H F M+ + + + I LGGG Sbjct: 265 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 324 Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 D + I EPG IV V I Sbjct: 325 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 384 Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296 + V VD + ++ L + A + A VCG Sbjct: 385 HLSDAKDSDGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 444 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI +K GD ++ Y + +N +P + + G +R Sbjct: 445 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPVVVAVSESGAHVMLR 504 Query: 356 EFSYNDYYN 364 + +D N Sbjct: 505 RQTVDDLLN 513 Score = 79.4 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 9/157 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P YLID +++ + + A K F + + + + + Sbjct: 22 GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 81 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K E A+ I+ + + + A+KL Sbjct: 82 TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 141 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 K+ LR+ V + G Sbjct: 142 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 178 >gi|307253178|ref|ZP_07535055.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859345|gb|EFM91381.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 170 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 46/145 (31%), Gaps = 5/145 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y+ + L + + A+K + + + + + G S E Sbjct: 26 GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMVRLGSGFDIVSQGE 85 Query: 63 VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117 + ++ K A+ ++++L++ + A +L K Sbjct: 86 LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145 Query: 118 IGLRINPSVSYSKFILADPNRPFSR 142 I LR+NP V ++ Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENK 170 >gi|119026435|ref|YP_910280.1| diaminopimelate decarboxylase [Bifidobacterium adolescentis ATCC 15703] gi|118766019|dbj|BAF40198.1| probable diaminopimelate decarboxylase [Bifidobacterium adolescentis ATCC 15703] Length = 524 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 62/242 (25%), Gaps = 35/242 (14%) Query: 158 VNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + G+ H F M+ + + + + LGGG D Sbjct: 278 LVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSM 337 Query: 214 FCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 + S I EPG V T V + + D Sbjct: 338 DIDVELGRLADAVSTVNRALGMPSPVISFEPGRWTVAPTGVTLYRVGTVKPVELSGEAKD 397 Query: 263 SSVE---------------AHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIF 303 S ++ L + A + V G C +GDI Sbjct: 398 KSGNPVTERVYVSVDGGMSDNIRPALYGSDYTARLANRKGSEQTKLCRVVGMHCESGDIV 457 Query: 304 GEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 +K GD ++ Y + +N +P + G IR + +D Sbjct: 458 VNEVRLPADIKRGDILAVPVTGAYGRTMASNYNQALIPAVVGVGEAGAHVMIRRQTIDDL 517 Query: 363 YN 364 + Sbjct: 518 LS 519 Score = 77.5 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 44/154 (28%), Gaps = 9/154 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P Y+ID + + N + A K + + + + + Sbjct: 34 GSPLYVIDTDDVRARATKFVHAASHAFNNTVTHVSFAGKALLSKEICRIVTESGMLIDTC 93 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K + + I+ + + + A++L Sbjct: 94 TMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFNKIVVDEPGEPERIATIAKRLG 153 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147 K+ LR+ + + G Sbjct: 154 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 187 >gi|154488019|ref|ZP_02029136.1| hypothetical protein BIFADO_01587 [Bifidobacterium adolescentis L2-32] gi|154083492|gb|EDN82537.1| hypothetical protein BIFADO_01587 [Bifidobacterium adolescentis L2-32] Length = 524 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 36/242 (14%), Positives = 62/242 (25%), Gaps = 35/242 (14%) Query: 158 VNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + G+ H F M+ + + + + LGGG D Sbjct: 278 LVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSM 337 Query: 214 FCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 + + I EPG V T V + + D Sbjct: 338 DIDVELGRLADAVSTVNRALGMPAPVISFEPGRWTVAPTGVTLYRVGTVKPVELSGEAKD 397 Query: 263 SSVE---------------AHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIF 303 S ++ L + A + V G C +GDI Sbjct: 398 KSGNPVTERVYVSVDGGMSDNIRPALYGSDYTARLANRKGSEQTKLCRVVGMHCESGDIV 457 Query: 304 GEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 +K GD ++ Y + +N +P + G IR + +D Sbjct: 458 VNEVRLPADIKRGDILAVPVTGAYGRTMASNYNQALIPAVVGVGEAGAHVMIRRQTIDDL 517 Query: 363 YN 364 + Sbjct: 518 LS 519 Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 18/154 (11%), Positives = 44/154 (28%), Gaps = 9/154 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P Y+ID + + N + A K + + + + + Sbjct: 34 GSPLYVIDTDDVRARATKFVHAASHAFNNTVTHVSFAGKALLSKEICRIVTESGMLIDTC 93 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S+ E+ + G + K + + I+ + + + A++L Sbjct: 94 SMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFNKIVIDEPDEPARIAAMAKRLG 153 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147 K+ LR+ + + G Sbjct: 154 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 187 >gi|73979727|ref|XP_532874.2| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 1 [Canis familiaris] Length = 331 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 82/275 (29%), Gaps = 38/275 (13%) Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 K+ LRI S + L+ + ++ +V G+ FH Sbjct: 16 HPKAKLVLRIATDDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDP 75 Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSE 223 F + + F + + +GGG ++ + K F Sbjct: 76 ETFVQAISDARCVFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPA 135 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVL-------------------------DISENIKNL 258 V++ EPG V + TL ++ +++ + Sbjct: 136 DSGVRVIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGS 195 Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 AHV L + Y+ + G +C D E + +GD + Sbjct: 196 FNCILYDHAHVKPLLQKRPKPD----EKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWM 251 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 FE++ Y + + FNG PTI T + Sbjct: 252 LFENMGAYTVAAASTFNGFQRPTIYYVMSGPTWQL 286 >gi|226823225|ref|NP_001017568.2| ornithine decarboxylase antizyme inhibitor [Danio rerio] Length = 454 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 46/367 (12%), Positives = 108/367 (29%), Gaps = 42/367 (11%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 K+ ++ D ++ ++ +K ++ + + L G S+ +E Sbjct: 39 KSAFFAADLGVIVQQQARWRNKMDQ--IRPFYTVKSNSSPVVVELLASLGTGFICSNKHE 96 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L + K A N ++ + +++ K + K + Sbjct: 97 LDLVKGFGVSSQDIILGGTCKQLSHIKYAAKHNIPLLVCDNEAEMRKIA-RCHPKAKVLL 155 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 L + S + + + V G+ F+ + FS + Sbjct: 156 LLTSESCCEKEEMAIPFGSTLKDCRRLLECAAGELNLQVTGVKFNIPSCCQEVEKFSRAV 215 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYL 231 F ++ + +GGG +++ + Q LK + Y + I Sbjct: 216 SEARCVFDMGEELGFEMNILDIGGGFDGSEEQLDKVN--QMLKPMLDMYFPRSTGLSIIA 273 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS---------VEAHVPDYLLYQ------ 276 EPG V++ TL ++D ++ H+ D + Sbjct: 274 EPGAYYVSSAFTLAVNIIDKKTVARDCSAQPHDALSANDEPEFLYHINDGVYGSFASKLL 333 Query: 277 ---------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + +++ + G S D+ E + +GD + F + Sbjct: 334 CEDSIATPLAHKHVSADEPLFSSSLWGPSEDDLDLVMERCLLPELSVGDWLLFRNAGA-- 391 Query: 328 INRKNWF 334 + F Sbjct: 392 SALGSAF 398 >gi|218190654|gb|EEC73081.1| hypothetical protein OsI_07046 [Oryza sativa Indica Group] Length = 297 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 56/201 (27%), Gaps = 12/201 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+YL K +++ N + + A+K + L + G S E+ Sbjct: 97 TPFYLYSKPQVVRNFTAYRDALEGLRSIVGYAVKANNNLRVLQLLRELGCGAVLVSGNEL 156 Query: 64 MLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIG 119 L F +N ++ + + ++ L A+ + Sbjct: 157 RLALRAGFDPTRCIFNGNGKTLEDLVLAAESGVFVNIDSEFDLENIVTAARVAGKKVPVL 216 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171 LRINP V S+ G + + S + G+ H Sbjct: 217 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYSNDITLVGVHCHLGSTITK 276 Query: 172 FLCFSAMLKNIEKEFGHFITQ 192 + L + + Sbjct: 277 SQPYIVELAPPLPALLCELFE 297 >gi|125581938|gb|EAZ22869.1| hypothetical protein OsJ_06556 [Oryza sativa Japonica Group] Length = 200 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 52/179 (29%), Gaps = 12/179 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+YL K +++ N + + A+K + L + G S E+ Sbjct: 21 TPFYLYSKPQVVRNFTAYRDALEGLRSIVGYAVKANNNLRVLQLLRELGCGAVLVSGNEL 80 Query: 64 MLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIG 119 L F +N ++ + + ++ L A+ + Sbjct: 81 RLALRAGFDPTRCIFNGNGKTLEDLVLAAESGVFVNIDSEFDLENIVTAARVAGKKVPVL 140 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENK 170 LRINP V S+ G + + S + G+ H Sbjct: 141 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYSNDITLVGVHCHLGSTIT 199 >gi|1834397|emb|CAA69402.1| ornithine decarboxylase [Crithidia fasciculata] Length = 721 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 92/295 (31%), Gaps = 25/295 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ID +++ + + + V+ A+KC + + L G +S E+ Sbjct: 288 PFYMIDLGRVVEQMARWRH--ELPMVRPHFAVKCNPNLAIMEVLGALGAGFDCASKDEIH 345 Query: 65 LGHEKF---GGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 L + + + K +A + + V ++ K + Sbjct: 346 LVLDNHLVDSPDDIVFANPCKQLGDLREARACGVTYVTVDNVPEMEKIGR--MLPSARAI 403 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RI + + +K + E V G+ FH N + + L Sbjct: 404 IRIKTNDAAAKCAFSTKFGAGMDDVESLLQAARQHNVEVYGVSFHVGSGNGDQSAYVSAL 463 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSEKYS----V 227 ++ + F + + +GGG T+ + + ++ E+ V Sbjct: 464 RDSYRVFQLAAGYGFNCTVLDIGGGYPGTEPIPGSGETSFETIARAMRPVLEELFGGGDV 523 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISE----NIKNLVIVDSSVEAHVPDYLLYQES 278 I EPG T L V +++ ++ + YQ Sbjct: 524 TIISEPGRYFTAATHALAMNVFATRTLRLSDVEKENCQAFQNVVNMDEPEEYQYY 578 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%) Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C + D + +K+GD + D+ Y FNG Sbjct: 663 IFGPTCDSMDCILKKQPFPEMKLGDWLLAPDMGSYTTAAGCPFNGF 708 >gi|196013974|ref|XP_002116847.1| hypothetical protein TRIADDRAFT_60902 [Trichoplax adhaerens] gi|190580565|gb|EDV20647.1| hypothetical protein TRIADDRAFT_60902 [Trichoplax adhaerens] Length = 393 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 109/348 (31%), Gaps = 33/348 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL+D ++N T + L A+K + + TL G +S E+ Sbjct: 36 PFYLVDISDVINKYKTLFFKVFFITHIFLTAMKSNPDFQIAATLCGLGTGLDVASAGEIE 95 Query: 65 LGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E Y+ K A N + F++ +L++ K + L Sbjct: 96 TAVAVGLKDEDVIYSNTCKGISHLKVAAKENLTQMTFDSEVELHRIKRLYPSARLVLRLL 155 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + S+S+ L + NV G FH E S ++ ++ Sbjct: 156 V--DDSHSELKLGVKAGASFSRVPHLLKVAKELGLNVIGTSFHVGSECGSPDAYAKAIEK 213 Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKYSVQIYLEPG 234 + F + + +GGG + F V+I EPG Sbjct: 214 SRRVFDIAKGLGMKFNLLDIGGGYPGQINELFTNISRIINKALDIHFPSDSGVRIISEPG 273 Query: 235 EAIVTNTTTLNTTVL---------DISENIKNLVIVDSSVEAHVPDYLLYQESAT----- 280 + +++ L ++ D + + H+ + ++ + Sbjct: 274 QYFSCSSSILVANIISKRIRFEDDDTQIEGYPSDKENMEITYHINEGVIGAFISKLIINL 333 Query: 281 -------IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 I N Y + + G +C D + +++G+ + +E Sbjct: 334 LYIPKKLIKSNEKCYRSSMWGPTCTPVDQILSDYNLPEMEVGEWVYYE 381 >gi|225352614|ref|ZP_03743637.1| hypothetical protein BIFPSEUDO_04240 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156808|gb|EEG70202.1| hypothetical protein BIFPSEUDO_04240 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 529 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 33/249 (13%), Positives = 63/249 (25%), Gaps = 35/249 (14%) Query: 151 IESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTD 206 ++ + G+ H F M+ + + + + LGGG Sbjct: 276 RHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAY 335 Query: 207 KDYPVKDF-----------CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 D + + I EPG V T V + Sbjct: 336 TDGEDSMDLDTELARLADAVTTVNRALGMPAPVISFEPGRWTVAPTGVTLYRVGTVKPVQ 395 Query: 256 KNLVIVDSSVE---------------AHVPDYLLY----QESATIYPNTGPYTAMVCGRS 296 D + ++ L A ++ V G Sbjct: 396 LAGTAKDKAGNPVTERVYVSVDGGMSDNIRPALYGSDYTARIANREGSSETKLCRVVGMH 455 Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355 C +GDI ++ GD ++ Y + +N +P + + IR Sbjct: 456 CESGDIIVNEVRLPADIQRGDVLAVPVTGAYGRTMASNYNQALIPAVVAVSEQDAHVMIR 515 Query: 356 EFSYNDYYN 364 + +D + Sbjct: 516 RQTVDDLLD 524 Score = 77.9 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 44/154 (28%), Gaps = 9/154 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P Y+ID + N + A K + + + + + Sbjct: 37 GSPLYVIDTDDVRARAAKFVKSAANAFNNTVTHVSFAGKALLSKEICRIVTESGMLIDTC 96 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K + I+ + ++ + + A++L Sbjct: 97 TMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAITEGFAKIVVDEPNEPARIAEIAKRLG 156 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147 K+ LR+ + + G Sbjct: 157 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 190 >gi|218261897|ref|ZP_03476576.1| hypothetical protein PRABACTJOHN_02247 [Parabacteroides johnsonii DSM 18315] gi|218223711|gb|EEC96361.1| hypothetical protein PRABACTJOHN_02247 [Parabacteroides johnsonii DSM 18315] Length = 181 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 2/167 (1%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 ++++ L NL +++ AGV ++LA K FA W F + +Y+ +T+SS +E L E Sbjct: 1 MEEKLLRRNLSLIKSVKEKAGVNIILAFKAFAMWKAFPIVREYIPYSTASSKFEARLAFE 60 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGLRINPSV 126 + G H Y+ AY + + +L + FN+++Q +F KA GLRINP Sbjct: 61 EMGSRAHTYSPAYTEADFPEILRYSSHVTFNSLTQFERFYPMVKADGNRVSCGLRINPEY 120 Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173 S + L +P P SR+G + V GL FH CE+ S+ Sbjct: 121 SDVETDLYNPCAPGSRMGVVSDLLGDKLPDGVEGLHFHTLCESSSYD 167 >gi|145640802|ref|ZP_01796384.1| diaminopimelate decarboxylase [Haemophilus influenzae R3021] gi|145274316|gb|EDK14180.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.4-21] Length = 105 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 27/98 (27%), Gaps = 5/98 (5%) Query: 269 VPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + L I + V G C D G+ + GD I+ Sbjct: 2 IRPALYEAYMNIIEIDRTLAREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAG 60 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 Y + + +N + + D + R + + Sbjct: 61 AYGASMSSNYNSRARTAEVLVDGDQSYLIRRRETLQEL 98 >gi|86742732|ref|YP_483132.1| diaminopimelate decarboxylase [Frankia sp. CcI3] gi|86569594|gb|ABD13403.1| Diaminopimelate decarboxylase [Frankia sp. CcI3] Length = 484 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 50/412 (12%), Positives = 104/412 (25%), Gaps = 94/412 (22%) Query: 30 VKLLLALKCFAAWGMFDTL----------------------------------------- 48 ++ A+K + + D L Sbjct: 61 AEVCYAVKANSFPPILDALLRGTGPDIPRSGRERSDSSPGASPTDARSDARSDARSDARS 120 Query: 49 -------NQYMDGTTSSSLYEVMLGHEKFG-------GETHAYNVAYKDCEIDAVLSNC- 93 + +DG SS +EV L +G A + A++S Sbjct: 121 DARTGASGRGIDGFEVSSAHEVRLAQAAYGRVDSARRPRLVASGPGKSMTLLTALVSADV 180 Query: 94 DTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR--------PFSRLGE 145 D + + +L + A +L +++ + + + + P + + Sbjct: 181 DVVNVESFGELRRLDAVAARLGRRVRAAVRVNPAQVGLAGSLQMGGRPSAFGIPETEVPA 240 Query: 146 KCKDKIESEIKNVNGLMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGG 201 + + +V G H N L + ++ + +GGG Sbjct: 241 ALELAADLAHIDVVGFHVHAVSGNLDAAAHLGYVRWCLDFAVRTAAVAGIELRMVDVGGG 300 Query: 202 IHFTDKD-------YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 + + + F + L ++ EPG +V ++ V+D+ + Sbjct: 301 FGVPFEPDRRGDRPFDLIRFGEGLSSLPVPDGTRVIFEPGRMLVADSGWYAAEVIDVKHS 360 Query: 255 IKNLVIVDSSVEAH--VPDYLLYQESATIYPNTGP----------------YTAMVCGRS 296 ++ H +P + + +G V G Sbjct: 361 YGTEFVILRGGIHHFALPTSWEIVHNFAVVERSGRNGGPEPEHTREAVVEGRPVTVVGEL 420 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNV 347 C D V+ GD + F Y F G Sbjct: 421 CTPEDTLARDITVDRVRPGDVVVFPMAGAYGYEFALPDFLGHPRARRIELRG 472 >gi|16520033|ref|NP_444153.1| conserved uncharacterized 49.9 kDa enzyme; second copy encoded by pNGR234b [Sinorhizobium fredii NGR234] gi|2496780|sp|P55709|Y4YA_RHISN RecName: Full=Uncharacterized protein y4yA gi|2182725|gb|AAB91940.1| conserved uncharacterized 49.9 kDa enzyme; second copy encoded by pNGR234b [Sinorhizobium fredii NGR234] Length = 457 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 55/410 (13%), Positives = 108/410 (26%), Gaps = 66/410 (16%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P L+ L NL + ++ + K + G+ G SSL Sbjct: 39 GSPLNLVWPDALRENLAALKGVLTERRLEHAIYYGAKANKSPGLMQAALSAGAGLDVSSL 98 Query: 61 YEVMLGHE-KFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 YE+ G A +++ I ++ +L Sbjct: 99 YELRDARRLGADGARLVATGPAKTSAFHQELINCNALISVDSPEELEDL--IHGLPADAG 156 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS-A 177 I + + P + +GL FH + + + Sbjct: 157 QQSILLRLRPRDQSKSRFGMPPDAVVHCLARLAGEGRVRFDGLHFHLSGYRRETRVAALR 216 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKD----------------------------- 208 ++ E I +GGG+ D Sbjct: 217 EAADLIAEARRMGFFPGMIDIGGGLPIQYVDRARYKAHLAAQAPEDYRTGKIPDSFYPYG 276 Query: 209 -------------YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT-------- 247 + + + + + + + +EPG A+ Sbjct: 277 STLSAADWLHRLLEAEMNQGRSVAGYLAREGLTLAMEPGRALADQAAITVFRISRVKALG 336 Query: 248 ----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303 V+ + + + + E + L+ AT+ P A + G SCL D+ Sbjct: 337 PDSHVIFVEGSSFSACETWFASEFLIDPILVPATKATVQLP--PVRAYLAGHSCLDEDVI 394 Query: 304 GEFH--FEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMPTIAVKNVDGT 350 F + GD + + + GY ++ +N F+ MP D Sbjct: 395 SNRWLTFPTAPRAGDLLVYANTGGYQMDLLENEFHRHPMPARFCVIEDAE 444 >gi|219115001|ref|XP_002178296.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410031|gb|EEC49961.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 392 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 47/393 (11%), Positives = 96/393 (24%), Gaps = 71/393 (18%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEVM 64 + L D + L + V+ L ALKC + L Q G +SL EV Sbjct: 4 FVLCDLNIIRKKLQVWRQLFPR--VRPLFALKCNPDPMVAAVLGQSGVCGFDCASLPEVE 61 Query: 65 LGHEKF--GGETHAYNVAYKDCEIDAV----------LSNCDTIIFNTVSQLNKFKDKAQ 112 L + Y + + + + + + + ++ Sbjct: 62 LALKSVSNNPRLLVYANPQRAEKDLEMALSLGVRALTFDGPEELHKVHRAYQQRLAAQSN 121 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE---- 168 ++ LRI S L + + + + G+ FH Sbjct: 122 SRPPQMILRILVPDESSTVPLGEKFGASPARIASLANLALTLGLRIIGVSFHCGSGNHDP 181 Query: 169 -------------NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 ++ K +GG Sbjct: 182 RAYRIAIELAAEAIQTIDLVQKDHKAACWLLDIGGGYPGLDGMGGDAGRFCGSKVKLDES 241 Query: 208 --DYPVKDFCQ--------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV--------- 248 + + L + + EPG V L + + Sbjct: 242 LVQEDETETTEKVSNIVSPLLNKLFPHEQIHFVSEPGRYFVEGAFALCSRIYQAQSEYAS 301 Query: 249 ----------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCL 298 I++ ++ + L+ +S +++ G S Sbjct: 302 ESRHTVVRRHYFIAQGVQGMFKDCLLCNEVFTPVPLFVDSCCTDVI--RIPSVIHGPSGE 359 Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 DI H ++ GD + F+ + Y ++ Sbjct: 360 LYDIIARDHPLPFLEAGDWLLFDRMGAYTLSIA 392 >gi|241573001|ref|XP_002403147.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215500179|gb|EEC09673.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 319 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 107/323 (33%), Gaps = 31/323 (9%) Query: 35 ALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVA--YKDCEIDAVLS 91 A+KC + + TLN S+ E+ + + + Y A Sbjct: 1 AVKCNSDPVVLRTLNSQGVNFDCSNKGEIKVVLDMGVTPDRVVYANTVKCTSHLRFAEKH 60 Query: 92 NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI 151 + F++ +L+K DK + ++ LRI S S + + EK Sbjct: 61 GVTLMTFDSEEELSKINDK----NARLLLRIAASEYGSHQTMNAKYGSYPHEVEKLMKLA 116 Query: 152 ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIH-FTDK 207 + N+ G+ FH C F+ + F + + +GGG K Sbjct: 117 FFKGLNIVGVSFHVGCSFTHTEIFAQTIAEARGVFDSGARIGFSMTLLDIGGGFPGGVRK 176 Query: 208 DYPVKDFCQRLKEFSEKYSV-----QIYLEPGEAIVTNTTTLNTTVL----------DIS 252 K + +K +++ +I EPG+ VT+ TL T V+ ++ Sbjct: 177 LERFKQVAETIKCAIDEHFPLSSGVKIIGEPGQFFVTSAYTLVTKVIAKRRKDVTIDGVA 236 Query: 253 ENIKNLVIVDSSVEAHVPDYLL-----YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH 307 +N+ I +S D Y+ + + + +C D + Sbjct: 237 HRHENIFINESKYNCIPRDLYPFMDITYKPLSPPHDRPREVLTTLWAATCNPMDCILDKQ 296 Query: 308 FEKPVKIGDRISFEDVAGYNINR 330 V + + + +++ Y + Sbjct: 297 PFFEVDVDEWMLMDNMGAYTLVL 319 >gi|323456327|gb|EGB12194.1| hypothetical protein AURANDRAFT_61431 [Aureococcus anophagefferens] Length = 1068 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 42/383 (10%), Positives = 95/383 (24%), Gaps = 41/383 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68 D L + + A K M + G +S E E Sbjct: 349 YDLDAWETQLRACVGAFGPTFEHAI-ACKSNPLALMLRRAAELGFGVECASATEAAHAVE 407 Query: 69 K---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI----GLR 121 G + E+ L + + +L++ + ++ + G+R Sbjct: 408 ACGVAPGRVVFDSPCKTRVELAYALETGLHCNLDNLDELDRATEIVARMGRPPAGRVGVR 467 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCENKSFL 173 +NP V + S+ G D + + + H Sbjct: 468 VNPRVGAGTIAALSVSTSASKFGVDIGDAAQRADLLAKFAARPWLTSVHVHVGSGGMGLG 527 Query: 174 CFSAMLKNIEKEFGHFITQ--IEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYS-- 226 A + + + +GGG+ + L++ + + Sbjct: 528 QLVAGVAAAVAFANDARETNAVACVDIGGGLPVDYGSDAAPDFAGYAALLRDATPELFDG 587 Query: 227 -VQIYLEPGEAIVTNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLL 274 + E G ++ + L + + + + + + Sbjct: 588 TYAVVTEFGASLNAKSGFLASRIEWLKDQPTRRLAIVHFGADLCLRQAYTADHGRRWAAF 647 Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNW 333 + A + G C GDI + ++ GD + D +++ + Sbjct: 648 DAAGRAFPHDAPLADAAIGGPLCFQGDILADDLKLPAALRAGDLVVMRDAGANSLSLFSR 707 Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356 P + G R Sbjct: 708 HCSRVAPPVY-----GFRTVARR 725 >gi|288918894|ref|ZP_06413238.1| Diaminopimelate decarboxylase [Frankia sp. EUN1f] gi|288349746|gb|EFC83979.1| Diaminopimelate decarboxylase [Frankia sp. EUN1f] Length = 529 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 50/389 (12%), Positives = 94/389 (24%), Gaps = 71/389 (18%) Query: 28 AGVKLLLALKCFAAWGMFDTLNQYM---DGTTSSSLYEVMLG------------------ 66 L A+K + + D L DG SS E+ L Sbjct: 114 PWAHLYFAVKANSFPPVLDALLAGGHGVDGFEISSARELALATDALARAGQPTQPRPQRQ 173 Query: 67 -----------------HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G++ + A D D + + +L + Sbjct: 174 SQSQLQPPLPPRSRPRLVASGPGKSLSLLRALLDPAAGESSGTVDVVNVESPLELLRIDA 233 Query: 110 KAQKLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKD-------KIESEIKNVNGL 161 A + ++ + + + + + S G + ++ ++ G Sbjct: 234 VATRAGRRSAVALRVNPARVGLAGSLRMGGRPSAFGIEEREVPSAVELARSLPGIDLVGF 293 Query: 162 MFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-------YP 210 H N L ++ + + +GGG+ + + Sbjct: 294 HVHAVSGNLDAAAHLEYVRWCLDFAVRQAHEGGFDLRVVDVGGGLGVPFEPDRLGERPFD 353 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-- 268 + F L V++ EPG +V + V D+ V H Sbjct: 354 LDLFGDGLARLRPPTDVRVIFEPGRMLVADCGWYAAEVTDVKRVHGEAFAVLRGGINHFQ 413 Query: 269 VPDYLLYQESATIYPNT-----------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 +P + + P V G C D ++ GD Sbjct: 414 LPTSWEIVHNFAVVPRESWPVGWPRPEVAAGPVTVVGELCTPEDTLARDVTVDRLRAGDV 473 Query: 318 ISFEDVAGYNINRKNW-FNGINMPTIAVK 345 + F Y F G V Sbjct: 474 VVFPMAGAYGYEFAMHEFLGHPRAARIVL 502 >gi|47229384|emb|CAF99372.1| unnamed protein product [Tetraodon nigroviridis] Length = 603 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 33/358 (9%), Positives = 88/358 (24%), Gaps = 16/358 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KT + + D L+ I + ++ +KC ++ + + + G + E Sbjct: 37 KTAFVVGDLGALMRQHVRWQSI--SPRLQPYFPVKCNSSPAVIEVMASLGLGFVCVNKAE 94 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + L E E + K + + ++ FK + K+ L+ Sbjct: 95 MSLVLEHGVPPEAVILSGVCKQQAHIKYAAKNNIQNLVCENEAELFKISRLHPNAKLLLQ 154 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 ++ ++ + + + V G+ FH + + Sbjct: 155 LSTQAHAAETS--MTFGFSLKSSRHLLEAAKQLGLQVVGVSFHIPSSCQDLQEAYTHALS 212 Query: 182 IEKEFGHFITQ------IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + + ++ ++ + Sbjct: 213 DARCVFDMGVESALKPLLDTYFSPLSGVQVLAQPGNFYVASAFCLAVTIMGKKLVNPRWD 272 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295 + T L + + + Y + + G Sbjct: 273 NLAQGEDNEGTEFLYYMNEGIYGPFSCKLLGNSI--SAPSVHKHALCAEEAMYPSSLWGP 330 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 S D E + +GD + F ++ + F + +P + + Sbjct: 331 SLDQLDQVVERCLLPELSVGDWLLFPNMGACGL---EDFGSLQLPVYYTVSTSDWFEM 385 >gi|23012520|ref|ZP_00052584.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 274 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 27/244 (11%), Positives = 73/244 (29%), Gaps = 15/244 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++D + N ++ A+K A + L + ++S+ E+ Sbjct: 21 PVMVLDLDVVRENYTAFARAL--PDTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78 Query: 65 LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119 + + ++ + + A+ + +++ K ++ + G Sbjct: 79 MALSAGATADRVSFGNTIKKERDIVRALKLGIRLFAVDCQAEVEKISRASEAAGIEAGDV 138 Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 RI + + + L+ + + + G+ FH + + + Sbjct: 139 QVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLHAYGVSFHVGSQQANTEAWD 198 Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQIYL 231 L + F + ++LGGG + V+ + + K+ Sbjct: 199 GALASAAAIFQDCALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTKHFGNRIP 258 Query: 232 EPGE 235 E Sbjct: 259 ETNH 262 >gi|304380085|ref|ZP_07362806.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304341321|gb|EFM07239.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 333 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 83/333 (24%), Gaps = 35/333 (10%) Query: 55 TTSSSLYEVMLGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 +S E+ G + + AV I ++ +L + + Sbjct: 1 FEVASQGEIAKGLVFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILE 60 Query: 113 KLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFH 164 K + + + ++ G + + +++G FH Sbjct: 61 DEDKTQHILLRVNLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFH 120 Query: 165 NNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKD 213 + N K + ++ I+LGGGI + + Sbjct: 121 SISNNLDSNLHVDVVKLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVE 180 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DY 272 + L E V + E G IV + T VLDI + + Sbjct: 181 NFKTLIVEQEMEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPV 240 Query: 273 LLYQESATIYPNTGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + G+ C D+F + + GD I F Sbjct: 241 SWQHNHPFDIYRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREIQIEAISTGDVIVF 300 Query: 321 EDVAGYNINRKNW-FNGINMPTIAVKNVDGTIK 352 + Y + + F P + Sbjct: 301 KYAGAYGWSISHHDFLSHPHPEFIYLTQTKEDE 333 >gi|238927649|ref|ZP_04659409.1| diaminopimelate decarboxylase [Selenomonas flueggei ATCC 43531] gi|238884574|gb|EEQ48212.1| diaminopimelate decarboxylase [Selenomonas flueggei ATCC 43531] Length = 347 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 68/241 (28%), Gaps = 15/241 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D+ K+ N + A+K + L++ GT SS Sbjct: 33 PTPFHLYDEAKIRANFRRLRETFAWAPSFREHFAVKALPNPRIVQILHEDGAGTDCSSTP 92 Query: 62 EVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+++ GE D + + + L+ A+ L Sbjct: 93 ELIISAAAGVKGEEIMLTSN--DTPYEEFQKAIELGAVINLDDLSHLDYMAEHAGLPNLL 150 Query: 121 RINPSVSYSKFILADPNRP-FSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL 173 + +P ++ G + E + + G+ Sbjct: 151 CFRYNPGNLVEGNDIIGKPVEAKYGLTREQMFEGYRRALEMGVKRFGVHTMVISAELRTE 210 Query: 174 CF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 F M + + +E+++LGGG + + E+ +I Sbjct: 211 AFLLTARLMFELAAELKEKLGIHVEFVNLGGGFGIPYRPEQDGIDYDAVGAGIERLYNEI 270 Query: 230 Y 230 Sbjct: 271 M 271 >gi|195453356|ref|XP_002073752.1| GK14274 [Drosophila willistoni] gi|194169837|gb|EDW84738.1| GK14274 [Drosophila willistoni] Length = 812 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 87/304 (28%), Gaps = 21/304 (6%) Query: 68 EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVS 127 K E + + ++ +K + + LR Sbjct: 500 SKVSPERIIFANPCRPISHVEYSRQQKVFDVTVDNEFEVYKLHKHYSNSNLILRFKSEAK 559 Query: 128 YSKFILADPNRPFSRLGEKCKDKIESEIKN-VNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 +K L D + + + V G FH F + + ++ F Sbjct: 560 AAKCPLGDKFGCDPNVNAAALLLLAKALDLKVTGSSFHVGSGCSEFAAYDRAIGKAKQIF 619 Query: 187 GH---FITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 ++ + +GGG + + Q ++ +QI EPG V + Sbjct: 620 DFGKLIGHKMSLLDIGGGFPGANDEEFEKIANVVNQSVERDFPDPGIQIISEPGRFFVES 679 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPD--------YLLYQE---SATIYPNTGPYT 289 TL + E + ++ D + Y E + P Sbjct: 680 AFTLICKIHAKREVRHPNNGKLELIMYYLNDGVFGSFNNVISYNEFVLPHHYLNRSKPVP 739 Query: 290 AM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + G +C A D E F +K+GD I F ++ Y FNG +P I Sbjct: 740 LYKSLLWGPTCDAVDKISEHIFLPHLKLGDLIGFHNMGAYTFPIACEFNGFKVPKILYFQ 799 Query: 347 VDGT 350 + Sbjct: 800 ANKE 803 >gi|316967348|gb|EFV51783.1| putative pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Trichinella spiralis] Length = 445 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 89/333 (26%), Gaps = 33/333 (9%) Query: 28 AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY---EVMLGHE-KFGGETHAYNVAYKD 83 VK +++C + LN+ S E+ + E Y K Sbjct: 80 PRVKPFYSVRCNGNEALLQILNRLGLSFECKSKACVTEIESVMKVGVSPEEILYANPCKT 139 Query: 84 CEIDAVLSNC--DTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS 141 + ++F+ +L K K + + ++ + + + Sbjct: 140 AKQVQHAMMRSVRKLVFDNEDELYKVKRFFPTAELILRINVSDTTTTVLSPNLNFGCDPE 199 Query: 142 RLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISL 198 G V G+ FH F+ + + + F ++ + + Sbjct: 200 SQGPSLLVLAMLLDLKVIGISFHVGSNCDDGTLFAEAIAHSRRLFDYATALGHKMRLLDI 259 Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPGEAIVTNTTTLNTTVLDIS- 252 GGG + + + EK+ + EPG TL TV+ Sbjct: 260 GGGFPGQNMAK-FQAIADEVNRSLEKHFPTDSGVDVVAEPGRFYAEKAFTLCCTVIARRT 318 Query: 253 -----------------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295 V S + D + Y VCG Sbjct: 319 VPANQITKNEADRNSFGYTYSINDGVYGSFNCILCDTGKPMATVLKEGREKLYWTSVCGP 378 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + + D+ + GD I FE++ Y Sbjct: 379 TDDSLDLVIAQCRMPMLGEGDVIVFENMGAYTF 411 >gi|33322676|gb|AAQ07072.1|AF496385_1 diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. lactis] Length = 219 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 65/203 (32%), Gaps = 16/203 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +TP + D K+ + + + GV ++ A K F+ ++ +N+ T S Sbjct: 16 QTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLAIYQVINEEGGHTDVVSG 75 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115 E+ F + +++ K + II + +++ + Sbjct: 76 GELWTAMKAGFPMDKVSFHGNNKSRAELEMAVDQGVGVIILDNFHEIDLLSQILEEKDAS 135 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166 K+ LR+ P +S + S+ G + + + + G+ H Sbjct: 136 SKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALELVLANPRMKMAGIHAHIG 195 Query: 167 CENKSFLCFSAMLKNIEKEFGHF 189 + F + + + Sbjct: 196 SQIFDVRGFVGCADKLCQLASAW 218 >gi|225387699|ref|ZP_03757463.1| hypothetical protein CLOSTASPAR_01469 [Clostridium asparagiforme DSM 15981] gi|225046204|gb|EEG56450.1| hypothetical protein CLOSTASPAR_01469 [Clostridium asparagiforme DSM 15981] Length = 298 Score = 99.8 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 73/229 (31%), Gaps = 13/229 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G K A+K + L + GT SS+ Sbjct: 29 PTPFHLYDEKGIRENAMKLKQAFAWNKGFKEYFAVKATPNPFILQLLKECGCGTDCSSMT 88 Query: 62 EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML F GE ++ E I + + + +D + + I Sbjct: 89 ELMLSEACGFSGEEIMFSSNDTPPEEFAYAARLGAIINLDDFTHIQFLEDTLGYIPETIS 148 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCEN---- 169 R NP + N S+ G + ++++ G+ Sbjct: 149 CRFNPGGVFKISNDIMDNPGDSKYGMTTEQMFEAFKILKAKGAKRFGIHAFLASNTVTNE 208 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218 L + + K I +I+L GGI + + + Sbjct: 209 YYPLLARQLFELAVKLKEETGAHIAFINLSGGIGIPYRPDQEPNDILVI 257 >gi|115961825|ref|XP_001194285.1| PREDICTED: similar to ornithine decarboxylase, partial [Strongylocentrotus purpuratus] Length = 312 Score = 99.4 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 90/314 (28%), Gaps = 19/314 (6%) Query: 19 DTALYIRKNAGVKLLLA-LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHA 76 + N G A +KC A + +TL G +S E+ + + Sbjct: 7 RRVVETLANLGAGFDWATVKCNADRRVVETLANLGAGFDCASKTELRQVLDMGVHPDRII 66 Query: 77 YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136 Y K + ++ K K ++ LRI + L+ Sbjct: 67 YANPCKAISHLRFAKKNGVRLMTFDNEEEIIKIKQVFPTARLVLRIWAEDKTAVIPLSVK 126 Query: 137 NRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQI 193 + + ++ V G+ FH + + + A +++ + + Sbjct: 127 FGCPLHEVRRLLEAAKNLDLAVEGICFHVGSGSGNPESYYAAIRDARTAYDIGNDIGHDL 186 Query: 194 EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 I +GGG + + ++ +Y L E + DIS Sbjct: 187 RIIDIGGGFPGKESSSIPFEKVYQMSIVPNEYPGSGLLTMYE--------NWNDIKDISA 238 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT------GPYTAMVCGRSCLAGDIFGEFH 307 + + ++V + + D L +++ G + D Sbjct: 239 TPEVAYYISNNVYSTLGDSFLIGAKFDAKVLKSSNNDGSERPSVLWGNTTSRVDCVRRHC 298 Query: 308 FEKPVKIGDRISFE 321 ++ GD + F Sbjct: 299 LLPELEEGDWLVFR 312 >gi|213649626|ref|ZP_03379679.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 306 Score = 99.4 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 84/268 (31%), Gaps = 45/268 (16%) Query: 141 SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF----ITQIEWI 196 + E C+ + ++ GL H + F+ K + E + + I Sbjct: 36 EQAEETCRRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLI 95 Query: 197 SLGGGIHFTDKDYPV---------------KDFCQRLKEFSEKYSVQ--IYLEPGEAIVT 239 ++GGGI K +DF + K+ I +EPG + Sbjct: 96 NVGGGIPVPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTG 155 Query: 240 NTTTLNTTV----------------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 + L T V + + S H D+ Y +A+ Sbjct: 156 SAAVLLTEVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHF-DWFFYVYNASRMT 214 Query: 284 NTGPYTAMVCGRSCLAGDIF------GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G C GD F EF K +GD ++F D Y I + +N Sbjct: 215 AAHDAWIKLAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNR 274 Query: 338 NMPTIAVKNVDGTIKAIREF-SYNDYYN 364 + + + +G + IR SY D Sbjct: 275 PRTGVVMIDKNGETRLIRREDSYEDMVK 302 >gi|194378014|dbj|BAG63370.1| unnamed protein product [Homo sapiens] Length = 308 Score = 99.4 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 88/284 (30%), Gaps = 38/284 (13%) Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 K+ LRI S + L+ R ++ + +V G+ FH Sbjct: 17 HPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDP 76 Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSE 223 F + + F + + +GGG ++ + K F Sbjct: 77 ETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPS 136 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVL-------------------------DISENIKNL 258 V+I EPG V + TL ++ +++ + Sbjct: 137 DSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGS 196 Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 AHV L + Y++ + G +C D E + +GD + Sbjct: 197 FNCILYDHAHVKPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWM 252 Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 FE+ Y + + FNG PTI + +++F D+ Sbjct: 253 LFENKGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 296 >gi|156977279|ref|YP_001448185.1| diaminopimelate decarboxylase [Vibrio harveyi ATCC BAA-1116] gi|156528873|gb|ABU73958.1| hypothetical protein VIBHAR_06065 [Vibrio harveyi ATCC BAA-1116] Length = 418 Score = 99.4 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 47/383 (12%), Positives = 110/383 (28%), Gaps = 32/383 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTL-NQYMDGTTSSS 59 KTP + + + + + ++ +K + TL N + G S Sbjct: 19 KTPSIIYSEVIISEQCAAIVEPISQSPMEGRVFFPIKASYEPIVLKTLVNNSISGFEVMS 78 Query: 60 LYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 +E+ + + +C + + D ++ N+++ + D Q Sbjct: 79 YHELKHIRALFGYQYPLIFSGLCPDECTLRLLCFEQDILVINSLNDCFRVVDLLQSSTDG 138 Query: 118 IGLRINPSVSYSKFILAD-PNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNC 167 + + +S+ N S+LG + E N+ G+ H Sbjct: 139 SRITLLLRISFPCLNSEIGYNGRNSKLGIIAYSNEMYRCLELLERHEGINLEGIHCHQLI 198 Query: 168 ENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223 S + M+ + K ++ +GGG+ Q +EF+E Sbjct: 199 HESSASEYRKMIHQMAKLIDSIESSTSFKLAVCDIGGGLESMPNIKTRSVVKQICQEFNE 258 Query: 224 KYSVQ-IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + + EPG A+V + T V+ + + + Sbjct: 259 ILPDRSLIFEPGRALVNSGGICVTKVIGQRVRTQTHHCTVDVGSNLLVPTSSKRYHIIHE 318 Query: 283 PN----------TGPYTAMVCGRSCLAGDIFGEFHF-EKPVKIGDRISFEDVAGYNINRK 331 + R + + P ++G + + Y + Sbjct: 319 DIINSEASLKEASCAVKVTFSDRVLSPANTIEDNVMMLSPPQVGSLLLIGNAGAYTSALE 378 Query: 332 NWFNGINMPTIAVKNVDGTIKAI 354 + + + + + G I+ + Sbjct: 379 HQWL-QPLHSTYFLSSSGDIETL 400 >gi|115741783|ref|XP_793679.2| PREDICTED: similar to ornithine decarboxylase, partial [Strongylocentrotus purpuratus] Length = 288 Score = 99.4 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 39/296 (13%), Positives = 86/296 (29%), Gaps = 18/296 (6%) Query: 36 LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD 94 +KC A + +TL G +S E+ + + Y K Sbjct: 1 VKCNADRRVVETLANLGAGFDCASKTELRQVLDMGVHPDRIIYANPCKAISHLRFAKKNG 60 Query: 95 TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE 154 + ++ K K ++ LRI + L+ + + ++ Sbjct: 61 VRLMTFDNEEEIIKIKQVFPTARLVLRIWAEDKTAVIPLSVKFGCPLHEVRRLLEAAKNL 120 Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPV 211 V G+ FH + + + A +++ + + I +GGG + Sbjct: 121 DLAVEGICFHVGSGSGNPESYYAAIRDARTAYDIGNDIGHDLRIIDIGGGFPGKESSSIP 180 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD 271 + ++ +Y L E + DIS + + ++V + + D Sbjct: 181 FEKVYQMSIVPNEYPGSGLLTMYE--------NWNDIKDISATPEVAYYISNNVYSTLGD 232 Query: 272 YLLYQESATIYPNT------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 L +++ G + D ++ GD + F Sbjct: 233 SFLIGAKFDAKVLKSSNNDGSERPSVLWGNTTSRVDCVRRHCLLPELEEGDWLVFR 288 >gi|227357986|ref|ZP_03842328.1| decarboxylase [Proteus mirabilis ATCC 29906] gi|227161721|gb|EEI46753.1| decarboxylase [Proteus mirabilis ATCC 29906] Length = 467 Score = 99.1 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 57/401 (14%), Positives = 121/401 (30%), Gaps = 65/401 (16%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ + N++ + + K G++ L +K + + G SSL Sbjct: 50 GSPLNIVWPHTVEQNVNAMVEVAKTFGIQTNLYYGVKVNKSQSLLQAAVAAGTGADVSSL 109 Query: 61 YEV-MLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 YE+ G E A A + A++ I+ +++ ++++ A + Sbjct: 110 YELNDAIRAGCKGTELCATGPAKTTAFLQALIVQGARIVIDSIEEMDELIHLATRWISPS 169 Query: 119 G-LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 G + I ++ + + + S+ V+G FH + + + Sbjct: 170 GRISILLRFRPESNHISRFGMSSAEIMTALEKLNYSDQVKVDGFHFHLSGYSSVSRIKAF 229 Query: 178 MLKNIEKEFGHF-ITQIEWISLGGGIHFTD-------------------------KDYPV 211 + I +GGG+ YP Sbjct: 230 FDTLPLISYARALGYSPYIIDIGGGLPVQYVDSHCYKKWLSTQTHKDYRTRRIPDSFYPY 289 Query: 212 KDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 + + + + + LEPG ++V + V + Sbjct: 290 GGEINAQGWLTEFLTGVDPTGKRVCDALIEEGLTLCLEPGRSLVNQSAISVFRVCRVRPY 349 Query: 255 IKNLVIVDSSVE------------AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302 ++ +Y+ + + G A + G SCL D+ Sbjct: 350 DHVGHVIFVEGTSFSACETWFNSEFLSDPLHIYRNNHQPLSSAGN--AWIAGHSCLDDDV 407 Query: 303 FGEF--HFEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMP 340 F K GD + F + AGY ++ +N F+ +P Sbjct: 408 ITNRLIAFAHLPKPGDLLIFANTAGYQMDLLENQFHRHPLP 448 >gi|197284143|ref|YP_002150015.1| decarboxylase [Proteus mirabilis HI4320] gi|194681630|emb|CAR40664.1| putative decarboxylase [Proteus mirabilis HI4320] Length = 467 Score = 99.1 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 57/401 (14%), Positives = 121/401 (30%), Gaps = 65/401 (16%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ + N++ + + K G++ L +K + + G SSL Sbjct: 50 GSPLNIVWPHTVEQNVNAMVEVAKTFGIQTNLYYGVKVNKSQSLLQAAVAAGTGADVSSL 109 Query: 61 YEV-MLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 YE+ G E A A + A++ I+ +++ ++++ A + Sbjct: 110 YELNDAIRAGCKGTELCATGPAKTTAFLQALIVQGARIVIDSIEEMDELIHLATRWISPS 169 Query: 119 G-LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 G + I ++ + + + S+ V+G FH + + + Sbjct: 170 GRISILLRFRPESNHISRFGMLSAEIMTALEKLNYSDQVKVDGFHFHLSGYSSVSRIKAF 229 Query: 178 MLKNIEKEFGHF-ITQIEWISLGGGIHFTD-------------------------KDYPV 211 + I +GGG+ YP Sbjct: 230 FDTLPLISYARALGYSPYIIDIGGGLPVQYVDSHCYKKWLSTQTHKDYRTRRIPDSFYPY 289 Query: 212 KDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 + + + + + LEPG ++V + V + Sbjct: 290 GGEINAQGWLTEFLTGVDPTGKRVCDALIEEGLTLCLEPGRSLVNQSAISVFRVCRVRPY 349 Query: 255 IKNLVIVDSSVE------------AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302 ++ +Y+ + + G A + G SCL D+ Sbjct: 350 DHVGHVIFVEGTSFSACETWFNSEFLSDPLHIYRNNHQPLSSAGN--AWIAGHSCLDDDV 407 Query: 303 FGEF--HFEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMP 340 F K GD + F + AGY ++ +N F+ +P Sbjct: 408 ITNRLIAFAHLPKPGDLLIFANTAGYQMDLLENQFHRHPLP 448 >gi|183597146|ref|ZP_02958639.1| hypothetical protein PROSTU_00386 [Providencia stuartii ATCC 25827] gi|188023457|gb|EDU61497.1| hypothetical protein PROSTU_00386 [Providencia stuartii ATCC 25827] Length = 467 Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 52/397 (13%), Positives = 118/397 (29%), Gaps = 61/397 (15%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P +I + N+ + + GV ++ +K + + + G SSL Sbjct: 53 GSPLNVIFPHTMQQNILKLNAVFQEHGVTGCIMYGVKVNQSNILVKIAVEEGIGVDVSSL 112 Query: 61 YEVMLGHE-KFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 +E ++ E A + + ++ + II +++ +L + Sbjct: 113 HEWQDAYDYGISPEKICATGPAKTNEFLWKLILHNSLIIVDSLEELQDILNLLSGTSFIA 172 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 + S+ + F + K + + F + Sbjct: 173 RVLFRYQPQMSRSRFGMKSAAFITALQLAKQHAGLLWQGI-HFHLGGYKSASRVQAFREL 231 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTD-------------------------KDYPV-- 211 I+ +I+ I +GGG+ YP Sbjct: 232 QPLIKSALS-LGFEIKTIDIGGGLPVQYVSTRQYQSWIDNQTSQYYQNNRIPTDFYPYGG 290 Query: 212 ---------------KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ +K + + +EPG +V + V+ +++ + Sbjct: 291 EQSATQWLTTFLSSQYTENETISQYLKKNHITLTIEPGRCLVDQSAISLFRVVRVNQQFQ 350 Query: 257 NLVIVDSS----------VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF 306 + +I + D L + P + G SCL D+ Sbjct: 351 HPIIFVEGSSFSACETWFNSEFLLDPLHVLVPHSKQHKQRPTRVWIAGHSCLENDVITHR 410 Query: 307 HFE--KPVKIGDRISFEDVAGYNIN-RKNWFNGINMP 340 + GD + F + AGY ++ +N F+ +P Sbjct: 411 LILFTHLPQAGDLLIFINTAGYQMDLLENQFHRHPIP 447 >gi|171742109|ref|ZP_02917916.1| hypothetical protein BIFDEN_01215 [Bifidobacterium dentium ATCC 27678] gi|283456768|ref|YP_003361332.1| diaminopimelate decarboxylase [Bifidobacterium dentium Bd1] gi|171277723|gb|EDT45384.1| hypothetical protein BIFDEN_01215 [Bifidobacterium dentium ATCC 27678] gi|283103402|gb|ADB10508.1| diaminopimelate decarboxylase [Bifidobacterium dentium Bd1] Length = 524 Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 66/266 (24%), Gaps = 35/266 (13%) Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHF 189 L + ++ + G+ H F M+ + + Sbjct: 254 MTMVADGPALAVLKDIQRHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATD 313 Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIV 238 + + LGGG D + + I EPG V Sbjct: 314 AYTLPEVDLGGGYSVAYTDGEDSMDIDVELGRLADAVTTVNRALGMPAPVISFEPGRWTV 373 Query: 239 TNTTTLNTTVLDISE---------------NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 T V + + + V VD + ++ L + Sbjct: 374 APTGVTLYRVGTVKPVRLNGDATDKAGNPVHERVYVSVDGGMSDNIRPALYGSDYTARLA 433 Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGIN 338 N V G C +GDI + GD ++ Y + +N Sbjct: 434 NRKGSDDTKLCRVVGMHCESGDIVVNEVRLPADITRGDILAVPVTGAYGRTMASNYNQAL 493 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 +P + IR S +D + Sbjct: 494 IPAVVGIGETDAHVMIRRQSIDDLLS 519 Score = 76.7 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 48/154 (31%), Gaps = 9/154 (5%) Query: 3 KTPYYLIDKQKLLNNLDTAL----YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P Y+ID ++ + N + A K + + + + + Sbjct: 34 GSPLYVIDTDEVRARASKFVTSAGNAFNNTVTHVSFAGKALLSKEICRIVTEAGMLIDTC 93 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K E A+ I+ + ++ + D A++L Sbjct: 94 TMGEMRIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVVDEPNEPARIADIAKRLG 153 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147 K+ LR+ + + G Sbjct: 154 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 187 >gi|156317064|ref|XP_001618032.1| hypothetical protein NEMVEDRAFT_v1g8610 [Nematostella vectensis] gi|156197064|gb|EDO25932.1| predicted protein [Nematostella vectensis] Length = 184 Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 15/184 (8%) Query: 34 LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFGGETHAYNVAYKDCE--IDAVL 90 A+K + + + L++ G S+ E+ E ++ K A+ Sbjct: 1 YAVKANSNLAVLNVLSRLGAGFDIVSVGELERVLRAGAKPERIVFSGVGKQPAEIRRALE 60 Query: 91 SNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK 148 + ++L + A +I R+NP V ++ G Sbjct: 61 VGILCFNVESEAELERVNQVAGECGKTAEISFRVNPDVDAGTHPYISTGLKENKFGIAIA 120 Query: 149 DKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLKN---IEKEFGHFITQIEWISL 198 + +V G+ H + F L+ + E I+ + L Sbjct: 121 EAKRIYQHAASLPHIHVVGMDCHIGSQLTELAPFMDALERLLGLIDELAEVGITIKHLDL 180 Query: 199 GGGI 202 GGG+ Sbjct: 181 GGGL 184 >gi|288541506|gb|ADC45578.1| lysine/ornithine decarboxylase [Streptomyces nanchangensis] Length = 396 Score = 98.3 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 52/369 (14%), Positives = 109/369 (29%), Gaps = 40/369 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66 + D + ++ +R+ GV + A+K + L G ++S+ E+ Sbjct: 14 VFDLTGIEERYESL--LRELPGVAVRFAMKACPVDEVLARLAGAGAGVDAASVPEMEQAL 71 Query: 67 HEKFG-GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G H N D I +++ + + A L + Sbjct: 72 RAGVPIGRVHYGNTVKSDRNIADAHRLGIRDFATDSLEDVAAIAEHAPGARVFCRLTTDT 131 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + +GL H + + + + + Sbjct: 132 RGALWELSGKY--GCSTADAVTILETARKLGLVPSGLSVHVGSQQMAPEAWRDAFERLAD 189 Query: 185 EFG---HFITQIEWISLGGGI--------HFTDKDYPVKDFCQRLKEFSEK------YSV 227 H ++ I+LGGG+ H D P+ ++E + + Sbjct: 190 VLAALDHHGIALDHINLGGGLPVPGYLDKHGRPLDPPIDKLFAVIREGMAHLRTIGGHHL 249 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPDYLLYQESATI 281 +EPG +V + V + + + + + + Q Sbjct: 250 AFVVEPGRYLVAGQGAIRAHVSRLSARRGPDGRRQYWLYLSCGKFNGLYEMDELQYPLVF 309 Query: 282 YPNTGP----YTAMVCGRSCLAGDIF----GEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 + GP A+V G +C + D + G + + GD + Y I+ Sbjct: 310 PTHGGPGTRHVPAVVAGPTCDSDDAYSHQDGLVQVPEALASGDPVWVLSCGAYAISYTTQ 369 Query: 334 -FNGI-NMP 340 FNG +P Sbjct: 370 GFNGFGPLP 378 >gi|15900104|ref|NP_344708.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae TIGR4] gi|149013610|ref|ZP_01834181.1| pyridoxal-dependent decarboxylase, Orn/Lys/Arg family protein [Streptococcus pneumoniae SP19-BS75] gi|14971633|gb|AAK74348.1| pyridoxal-dependent decarboxylase, Orn/Lys/Arg family [Streptococcus pneumoniae TIGR4] gi|147762801|gb|EDK69756.1| pyridoxal-dependent decarboxylase, Orn/Lys/Arg family protein [Streptococcus pneumoniae SP19-BS75] gi|301793450|emb|CBW35823.1| Pyridoxal dependent decarboxylase [Streptococcus pneumoniae INV104] Length = 368 Score = 98.3 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 112/354 (31%), Gaps = 21/354 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +P + D L LD +L A+K + + + L +DG +SL E Sbjct: 24 SPCVVYDFGLLETVLDEFKNQIPVTFNYQLFYAVKANSNEKILEFLVDKIDGVDVASLSE 83 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + + F +V + + + ++ L + + +G+R+ Sbjct: 84 LDVAKKFFPPTQI--SVNGPAFSYETLYNLIKKQYKVDINFLEHLQQ--FSPKESVGIRV 139 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + L FH ++ F+ + Sbjct: 140 TEPDELN--NRMSRFGINICSDNWTSNL---QNPLITRLHFHFGEKDDKFIVKLDKILFK 194 Query: 183 EKEFGHFITQIEWISLGGGIHF----TDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +E + ++ I+LGGG + K++ +V +EPG AI Sbjct: 195 LQEINK-LREVREINLGGGFMKLFMENRLKEFFLSLMEIYKKYDIDSTVTTIIEPGSAIT 253 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA--MVCGRS 296 + + + T+ +++SE + VI + T ++ ++ G + Sbjct: 254 SFSAYMITSPVNVSEVNEQQVITLDTSIYT-NTLWFVPHIITTLNSSSKERYSTILYGNT 312 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF--NGINMPTIAVKNVD 348 C D + + I F V Y + + N + + + Sbjct: 313 CYEHDKYKMKVSLPRLTQNSSIVFFPVGAYIKSNHSNLHRNDFMR-EVYLWTKN 365 >gi|191012|gb|AAA36963.1| ornithine decarboxylase [Cricetus cricetus] Length = 293 Score = 98.3 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 73/242 (30%), Gaps = 35/242 (14%) Query: 137 NRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQI 193 R ++ + +V G+ FH F L + F + Sbjct: 5 FGATLRTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQALSDARCVFDMGTEVGFSM 64 Query: 194 EWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT 247 + +GGG ++ + K F V++ EPG V + TL Sbjct: 65 YLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPPDSGVRVIAEPGRYYVASAFTLAVN 124 Query: 248 VL----------------------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 ++ +++ + AHV L + Sbjct: 125 IIAKKIVSKGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLPKRPKPD----E 180 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 Y++ + G +C D E + +GD + FE++ Y + + FNG P+I Sbjct: 181 KYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPSIYYV 240 Query: 346 NV 347 Sbjct: 241 MS 242 >gi|320167076|gb|EFW43975.1| ornithine decarboxylase 1 [Capsaspora owczarzaki ATCC 30864] Length = 476 Score = 98.3 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 83/258 (32%), Gaps = 14/258 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ID ++ D ++ V A+KC + L + G +S E+ Sbjct: 48 PFYIIDVGQVARKYD--QWVAALPRVDPFYAVKCNGDKTILKLLAKLGTGFDCASKAEMD 105 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + Y K S + + ++ K K + ++ LR+ Sbjct: 106 TVLKMGVPADRIIYAHPCKMASHVKFASQNNVRMMTFDNEHELHKMKELYPNARLVLRVL 165 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S L + +V G+ +H F+ + + Sbjct: 166 TDNSRSICNLGLKFGAALARVPHMLQLAKDLELDVVGVSYHVGSGCFDAQAFADAVAVAK 225 Query: 184 KEF---GHFITQIEWISLGGGIHFTDK-DYPVKDFCQRLKEFSEKYSV-------QIYLE 232 F + + LGGG +D + D L+ +K+ I E Sbjct: 226 TVFNIGAELGFKFNLLDLGGGFPGSDNVNVKFDDIASVLRVALDKHFPAAENKDLHIIAE 285 Query: 233 PGEAIVTNTTTLNTTVLD 250 PG V+ + TL +V+ Sbjct: 286 PGRYFVSASHTLAVSVVA 303 Score = 88.7 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%) Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + + G +C + D + + IGD + FED+ Y + + FNG P + Sbjct: 407 ESGFACSIWGPTCDSMDCITKTGRLPELAIGDWLYFEDMGAYTVAASSTFNGFPKPKLMY 466 Query: 345 KNVDGTIKAI 354 N + + Sbjct: 467 VNSESHRNLL 476 >gi|213418015|ref|ZP_03351093.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 110 Score = 98.3 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 26/84 (30%), Gaps = 7/84 (8%) Query: 288 YTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 +V G C +GD+F E V GD + D Y + + +N + Sbjct: 23 VETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLL 82 Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364 + + R + + Sbjct: 83 PEVLFDNGQARLIRRRQTIEELLA 106 >gi|196018902|ref|XP_002118886.1| hypothetical protein TRIADDRAFT_62879 [Trichoplax adhaerens] gi|190577850|gb|EDV18628.1| hypothetical protein TRIADDRAFT_62879 [Trichoplax adhaerens] Length = 641 Score = 98.3 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 84/235 (35%), Gaps = 13/235 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYE 62 TP ++ DK L + N L ALK + +L DG + S +E Sbjct: 389 TPVFITDKSILNKKVKNIRKAFDN-NCLLYYALKANFNPKIIRSLKDAGIDGVETISPFE 447 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-KKIGL 120 + L + F + D + + + + +++ + A+K + ++ + Sbjct: 448 IDLAKKCGFKSNQILFTGNNCDNYELDYANKQN--VVVNIGSISELQYYAEKHNGSEVSI 505 Query: 121 RINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 RINP +F S+ G E+ + I+ + GL H + Sbjct: 506 RINPGFGDGEFKQIITGGEDSKFGIYHSQMEEALNIIKFYNLKLIGLHCHLGSGLYNTKN 565 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 F+ M+ + + G+ I + +I LGGG K + +KY + Sbjct: 566 FAPMVDFM-FKLGNQIENLRFIDLGGGFGVRYKPSDEEVDLSEFALVVDKYYKKY 619 >gi|213420478|ref|ZP_03353544.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 275 Score = 98.3 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 78/224 (34%), Gaps = 16/224 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYP 210 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDD 268 >gi|147900989|ref|NP_001087584.1| antizyme inhibitor 1 [Xenopus laevis] gi|51512991|gb|AAH80385.1| MGC81852 protein [Xenopus laevis] Length = 443 Score = 97.9 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 104/347 (29%), Gaps = 30/347 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ I +K ++C ++ + + L G ++ E+ L Sbjct: 40 FFVADLGKIVKKHFKWKNIMG--HIKPFYTVRCNSSPAVLEILAALGMGFACANKNEMSL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 ++ E Y K + + S+ K L+ K+ L I Sbjct: 98 VYDLGISMENVVYTNPCKQASQIKHAAKIGVNLMTCESETELKKIVRNHLNAKLLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + D + V G+ FH + + + + L + Sbjct: 158 EGISGEEEMNMTFGTTLKNCRHLLDCAKELSVEVVGVKFHVSSSSNNPQTYIHALSDARC 217 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVT 239 F ++ + +GG + V L F E +I EPG V+ Sbjct: 218 VFDMAKELGFKMNILDIGGISENEAQLEEVYQAVSPLLDVYFPEGSGTRIIAEPGSFYVS 277 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE---------------------- 277 + TL V+ + + + +Y Sbjct: 278 SAFTLAVNVIAKEATEHDQHLSSAGKPNSNKPAFIYCMKEGVYGSFARKLSEKLNTAPEV 337 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 N + + + G S D+ E +++GD I F+++ Sbjct: 338 HKKYKDNEPLFASSLLGPSYDELDVIVEHCLLPELEVGDWIVFDNMG 384 >gi|311739239|ref|ZP_07713076.1| diaminopimelate decarboxylase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305665|gb|EFQ81731.1| diaminopimelate decarboxylase [Corynebacterium pseudogenitalium ATCC 33035] Length = 462 Score = 97.9 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 54/420 (12%), Positives = 123/420 (29%), Gaps = 78/420 (18%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P +++ L +N L + GV ++ A K A D G +S Sbjct: 43 GSPVNVLNSAPLRHNAQELLDAGASHGVATQVFFARKANKALCFVDAARDAGLGVDVASE 102 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + E + A D + +S TI ++ ++ + AQ L Sbjct: 103 NELRQVLDRGVAPERIILSAAIKTDGLLRLAVSRGVTISCDSRAESRRIAAIAQALDTTA 162 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 + + P R RL + + V G+ H + +++ + Sbjct: 163 HVAPRLAPDPDSLP---PTRFGERLP-AWRQAEWPQELRVVGVHVHLHGYSEADRRTALA 218 Query: 179 LK-NIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEF-------------- 221 + + ++I +GGG+ + + + +R+ Sbjct: 219 EAIALIEHVRALGQPADFIDIGGGVPMSYLESREQWEYYLERIASQRTGTGKPFTWKADP 278 Query: 222 ----------------------------------SEKYSVQIYLEPGEAIVTNTTTLNTT 247 + + ++LEPG +++ + Sbjct: 279 LSNTYPFWQEPTRGQWLDQLLSGEVPGYGTAGTALRERDIALHLEPGRSLLDGCGVILAE 338 Query: 248 VLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSC 297 V I + ++ + + L+ + P T V G C Sbjct: 339 VSFLKERSDGLPLIGVAMNRTQCRTAADDILLDPLLVPTAGPAKEISREPRTGFVVGAYC 398 Query: 298 LAGDIFGEFH--FEKPVKIGDRISFEDVAGYNI----NRKNWFNGINMPTIAVKNVDGTI 351 + ++ F + +GD ++ + AGY + + + I + + D + Sbjct: 399 IEDEVILRRELDFPDGIAVGDTLAIPNTAGYFMHILESASHQ---IPLARNVFYDGDDWV 455 >gi|297154183|gb|ADI03895.1| lysine/ornithine decarboxylase [Streptomyces bingchenggensis BCW-1] Length = 396 Score = 97.9 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 108/369 (29%), Gaps = 40/369 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66 + D + ++ +R+ GV + A+K + L G ++S+ E+ Sbjct: 14 VFDLTGIEERYESL--LRELPGVAVRFAMKACPVDEVLARLAGAGAGVDAASVPEMEQAL 71 Query: 67 HEKFG-GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G H N D I +++ + + A L + Sbjct: 72 RAGVPIGRVHYGNTVKSDRNIADAHRLGIRDFATDSLEDVAAIAEHAPGARVFCRLSTDT 131 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + +GL H + + + + + Sbjct: 132 RGALWELSGKY--GCSTADAVTILETARKLGLVPSGLSVHVGSQQMTPEAWRDAFERLAD 189 Query: 185 EFG---HFITQIEWISLGGGI--------HFTDKDYPVKDFCQRLKEFSEK------YSV 227 ++ I+LGGG+ H D P+ ++E + + Sbjct: 190 VLAALDRRGIALDHINLGGGLPVPGYLDKHGRPLDPPIDKLFAVIREGMAHLRTIGGHHL 249 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYLLYQESATI 281 +EPG +V + V +S + + + + + Q Sbjct: 250 GFVVEPGRYLVAGQGAIRAHVSRLSARQGPDGRRQYWLYLSCGKFNGLYEMDELQYPLVF 309 Query: 282 YPNTGP----YTAMVCGRSCLAGDIFGEF----HFEKPVKIGDRISFEDVAGYNINRKNW 333 + GP A+V G +C + D + + + GD + Y I+ Sbjct: 310 PTHGGPGTRHVPAVVAGPTCDSDDAYSHEDGLVQVPEALASGDPVWVLSCGAYAISYTTQ 369 Query: 334 -FNGI-NMP 340 FNG +P Sbjct: 370 GFNGFGPLP 378 >gi|330821058|ref|YP_004349920.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia gladioli BSR3] gi|327373053|gb|AEA64408.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia gladioli BSR3] Length = 398 Score = 97.5 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 51/382 (13%), Positives = 96/382 (25%), Gaps = 38/382 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60 ++TP Y+ D Q L G +L+++LK + DG +S Sbjct: 19 LRTPCYVYDPQVALARYRALK---ARLGTRLVVSLKANPDPALLARCASGFEDGVELASR 75 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------QKL 114 E+ L + N + + + A L+ I+ + + +F A + Sbjct: 76 GELALVETCTELPRYLNNPSMDEDFMRAGLAARCRIVLDNLDAARRFVPLALESAAHGRP 135 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---------VNGLMFHN 165 + I LR+N + + F + + + G Sbjct: 136 PEAILLRLNAGALAGEQARPHWHDHFGMTPNEAAAAVRALAAAGFAAAGLHVFAGPHSFA 195 Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK--EFSE 223 + ++L G + + + Sbjct: 196 RQDASPADLRILPEALAALARDLAPLNGAPLTLLGLGGGFAETLAPEAMFDGYRAALAPL 255 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPDY 272 + + E G AI + T V+ + + + V +H Sbjct: 256 AAAHTLTHEAGRAIFADAGWFVTRVVAVKHWADSSIAVCDGGLSHSFLLAQTELVMRRLA 315 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF--HFEKPVKIGDRISFEDVAGY--NI 328 T + G +C D+ G P GD F Y Sbjct: 316 SPILVRRTPAGVARAVPTLFVGSTCSRADVIGRDERRDAPPPHTGDLAVFPRCGAYHRTY 375 Query: 329 NRKNWFNGINMPTIAVKNVDGT 350 + F P GT Sbjct: 376 SM-THFLSHQ-PAHVEIRPTGT 395 >gi|254481038|ref|ZP_05094284.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [marine gamma proteobacterium HTCC2148] gi|214038833|gb|EEB79494.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [marine gamma proteobacterium HTCC2148] Length = 408 Score = 97.5 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 119/364 (32%), Gaps = 15/364 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP + D + + N + LLA+K + T Q++ G S+L Sbjct: 44 LSTPALVFDLDTITARMQALAQTAANQNIACLLAVKSCPREPLLKTAQQHLAGFDVSNLA 103 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E G+T + + + + ++ S Q LR Sbjct: 104 EYRALPADLSGKTVSLTSPQLTKDYYLFAARGNRLVVTVDSIAQCVNYLQQGAPFPYVLR 163 Query: 122 INPSV----SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 I S + + + + E+ + + + + G H+ E S + Sbjct: 164 IQGGQLLPTSDAAYTNCSRFGFTAPMLEQLLQRPDVQAQPPCGWHVHHGSEINSAATYQF 223 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 ++ + K I+LGGG H +K F K F E +++EPG+ Sbjct: 224 LMAGLAKLGAQLPEPPAIINLGGGWHSVEKQQLNDLFALARKVFPEPC--SVFIEPGQWF 281 Query: 238 VTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 V++ S + NL V + S++ H+ P + G S Sbjct: 282 GKGAGLAVGEVVNKSGDDDNLGCVLNLSMDCHLRWSSPRLLVPVQLPALKFAKVYLGGAS 341 Query: 297 CLAGDIFGEFHFE--------KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 C D G F + +G R+ +++ Y++ FNGI T Sbjct: 342 CYEADSLGCFMLPYRQDLAHDTSLGLGCRVLLSNISLYSLAWNQGFNGIAPATEYWLRNG 401 Query: 349 GTIK 352 ++ Sbjct: 402 LALE 405 >gi|168822845|ref|ZP_02834845.1| MccE [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205340846|gb|EDZ27610.1| MccE [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320089196|emb|CBY98949.1| ribosomal-protein-serine acetyltransferase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 588 Score = 97.5 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 43/363 (11%), Positives = 104/363 (28%), Gaps = 24/363 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P+++ D L K + +++K + + + S E Sbjct: 27 PFFIFDADSALERARHLTAACKEYFPDAVIAVSVKSCSLGIFLRLIAEEGLSAEVCSADE 86 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIGL 120 L F G+ + YK+ E ++ + + ++ +L++ ++KIG+ Sbjct: 87 FKLALKAGFTGDRIILDGPYKNSEDLSLALDKGALVHIDSAHELSEIIGLMSGYNQKIGV 146 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFLCFSAML 179 + S YS + ++ + S ++ G H ++ S L Sbjct: 147 GVRLSHIYSDTQRSRFGVTAEEFRDEIVPLLTSCPDISLRGFHLHTGSNLENPSKVSDCL 206 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKY---------S 226 ++ + + + +G G P + ++ Sbjct: 207 RDWLPFLVENMPEGGHLDMGSGFPADSFSPVAAVPTVEPAAFFRDIVSVLSEYDPALIQK 266 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA----TIY 282 ++ EPG + + + + + VI + +P + S Sbjct: 267 WKLIFEPGRTLSEDHGYAIGKTVSVKNRYDSEVIQTNLGINWIPSVHNWHHSLLPLGHNE 326 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 T ++ G +C D +K Y++ N + P + Sbjct: 327 HIPDDTTQILAGFNCFENDCLFPRGPL-NLKKNQLFIIRGCGAYDLQTANEW-TRTRPPV 384 Query: 343 AVK 345 Sbjct: 385 YAL 387 >gi|328858639|gb|EGG07751.1| hypothetical protein MELLADRAFT_71643 [Melampsora larici-populina 98AG31] Length = 562 Score = 97.5 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 76/261 (29%), Gaps = 22/261 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D + + VK A+KC + + + G +S E+ Sbjct: 117 FYVCDLAVVYRLYLRWQKVMGRR-VKPFFAVKCNPDPHVINLFAKLGLGFDCASHAEIAQ 175 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 Y K + + F+ + +L+K I + I Sbjct: 176 VLAFGVSPSNIIYANPCKAGSFIRHAHASGVEMMTFDNMDELHKVAKHHPSAKMVIRILI 235 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLCFS 176 + S R + G ++ NV G+ FH + + Sbjct: 236 DDRGS--------LCRFGEKFGAPLENVHLLLGTARQLGVNVIGVAFHVGSGCTNPELYK 287 Query: 177 AMLKNIEKEFG---HFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKYSVQIYLE 232 LK+ + F Q + +GGG + + + F V + E Sbjct: 288 DALKHAKWVFELASQHGYQFNLLDVGGGFGDDNLEFLAEGLLAGLDEYFPVGCGVNVIAE 347 Query: 233 PGEAIVTNTTTLNTTVLDISE 253 PG VT L T V+ + Sbjct: 348 PGRYFVTEAFELATNVIARRQ 368 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 3/69 (4%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEKP--VKIGDRISFEDVAGYNINRKNWFNGINMPTI-AV 344 + + G SC + D+ +K+GD + +E + Y + + FNG + + Sbjct: 484 HACRIFGPSCDSIDLVCPRTLLPTEVLKVGDWLKWERMGAYTVCAASQFNGFKISQVQYT 543 Query: 345 KNVDGTIKA 353 + G + Sbjct: 544 IDAKGDEEL 552 >gi|213582677|ref|ZP_03364503.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 351 Score = 97.5 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 78/224 (34%), Gaps = 16/224 (7%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHK-- 116 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + +R+ P+V + A + E C+ + ++ GL H + Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224 Query: 171 SFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYP 210 F+ K + E + + I++GGGI K Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDD 268 >gi|313246908|emb|CBY35760.1| unnamed protein product [Oikopleura dioica] Length = 301 Score = 97.1 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 95/293 (32%), Gaps = 35/293 (11%) Query: 102 SQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESE 154 + D + KIG+R+NP+V K ++ S+ G E KI E Sbjct: 1 MRACLLPDLNVDVTGKIGMRVNPNVGAGKIAMSSTAGKSSKFGLPMTGEFEDEVVKIILE 60 Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDY 209 + GL H + S + ++ + QI++I +GGGI + Sbjct: 61 NSWIQGLHQHIGSQGISLDQLTLGVERLVALARKINELAGTKQIKYIDVGGGIPTDYESD 120 Query: 210 P----VKDFCQRLKEFSEKYS-VQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDS 263 ++ + + E + E G ++VT + V + + V+ Sbjct: 121 NEKVAYAEYAKLVNERVPNLDEFNFHSEFGRSLVTKYAISVSKVETVKTWGDRITVLTHF 180 Query: 264 SVEAHVPDYLL---YQESATIYPNTGPYTA------MVCGRSCLAGDIFGEFHFEKPVKI 314 + + L + ++ G V G C GD + +K Sbjct: 181 GSNQFLREVYLPDTWFHRMSVLDQNGDPKVSDLIEQDVGGPLCFQGDYLAKARALPKIKP 240 Query: 315 GDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 GD I D+ GY + FN I P + + Y + + S Sbjct: 241 GDYIVMHDIGGYTYALYSRFNSIQAPAVYGYDASENF-------YE-FKSRES 285 >gi|21224367|ref|NP_630146.1| lysine/ornithine decarboxylase [Streptomyces coelicolor A3(2)] gi|3169049|emb|CAA19247.1| putative lysine/ornithine decarboxylase [Streptomyces coelicolor A3(2)] Length = 402 Score = 97.1 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 118/369 (31%), Gaps = 42/369 (11%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66 + D + DT + GV + A+K + L G ++S EV Sbjct: 26 VYDLAGIERRHDTLRN--ELPGVHVRFAMKACPVDEVLAALAGRGAGADAASPGEVEQAL 83 Query: 67 HEKFG-GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G H N D I +++ + A + Sbjct: 84 RAGVPAGRVHYGNTVKSDRNIAEAHRLGVRTFATDSLQDVAALAVHAPGARVFCRVAT-- 141 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK-- 180 + + N+ G+ + + + + GL H + + + + Sbjct: 142 --GGAGALWGLSNKFGCPPGDAVRVLVAARDAGLVPAGLSVHVGSQQMTSEAWHGAVDDL 199 Query: 181 -NIEKEFGHFITQIEWISLGGGI--------HFTDKDYPVKDFCQRLKEFSEKY------ 225 ++ + G +++ ++LGGG+ H D P+ ++E ++ Sbjct: 200 GDVLRALGRHGIRVDHVNLGGGLPALGYRDRHGAPLDPPLDKIFAVIREGMDELRRIHGG 259 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVP--DYLLYQE 277 + +EPG +V + + V+ ++E ++ + + + D L Y+ Sbjct: 260 HLDFVVEPGRHLVADHGAIRAHVVRLTERRAADGERQHWLYLSCGKFNGLYEMDALQYRL 319 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP----VKIGDRISFEDVAGYNINRKNW 333 +P+ A+V G +C + D + P + GD + Y + Sbjct: 320 VFPGHPDGPCVPAVVAGPTCDSDDAYSHEEGLVPVPAALASGDPVWVLSCGAYATSYTTR 379 Query: 334 -FNGI-NMP 340 FNG +P Sbjct: 380 GFNGFAPLP 388 >gi|170049413|ref|XP_001855919.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167871260|gb|EDS34643.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 346 Score = 96.4 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 98/298 (32%), Gaps = 12/298 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++ + K V A+KC A + TL +S E+ Sbjct: 36 PFYVMDIGDIVRKHQNWIE--KMPRVVPHYAVKCNDAEVVCSTLAALGASFDCASKGEIS 93 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + K A +N T+ F++ ++L+K + + +R Sbjct: 94 KILGLGVAPERIIFANPMKPSSHLRYANANNVKTMTFDSDTELHKIRKLCPDAKLVLRIR 153 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAM 178 + P K + S ++ G+ FH F + + Sbjct: 154 CEAEKAQCPLGKKFGCDPVEEAPRLIK-IVRSLDMDLVGISFHVGSGCADFPVYYKAISY 212 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 +++ ++ + +GGG D L +F SV++ EPG Sbjct: 213 ARDLFDYAATLGYELNLLDIGGGFPGDVGTSIDEVAMIVNSALDKFFPDKSVRVISEPGR 272 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293 V + TL T V + + ++ D + ++ +Y + P ++ Sbjct: 273 YYVASAFTLITCVQSKRVCLNAKTGTIDRMMYYLNDGVYASFNSILYDHQHPQPKLIG 330 >gi|154707006|ref|YP_001424392.1| non-ribosomal peptide synthetase module-containing protein [Coxiella burnetii Dugway 5J108-111] gi|154356292|gb|ABS77754.1| non-ribosomal peptide synthetase module-containing protein [Coxiella burnetii Dugway 5J108-111] Length = 499 Score = 96.4 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 40/333 (12%), Positives = 94/333 (28%), Gaps = 29/333 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+Y D L ++ + V + ++K + L + S YE Sbjct: 20 GTPFYGYDSTVLEKTFNSLREALPKS-VDIFYSIKANPNIAICSELRRLGACAELCSYYE 78 Query: 63 VMLG-HEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119 ++ F + A D EI L I+ ++ + + + A + KK Sbjct: 79 ILAAIKAGFNPSNIIFVGPAKSDKEIQKCLELGVYAIVCESIEEFKRISNLANRAGKKAR 138 Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN-- 169 + + + S+ K L S+ G + ++ N+ G+ +N Sbjct: 139 VALRINPSHVSKSALLKMGGKPSQFGMDEEIVFSNKNFFLKMPNINLVGIHVYNGTRILK 198 Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + +L + E + +GG V + + + Sbjct: 199 AETIVENTTYILNLARTFQKEWHQSFEMVDIGG---------WVITHWSSVPSIIQLLNQ 249 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG 286 L+ + + L + + + ++ ++ N Sbjct: 250 LKKLKKENFPSVSYSIFCGEALTLDTVRRWKLAAPNTTVDNLYGPTEATVAITGYLWNEN 309 Query: 287 PYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 + + G + + +K G+ Sbjct: 310 DHNDLVPIGWPFAGQGFYLLDER-GQEIKEGEV 341 >gi|198430949|ref|XP_002123942.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Ciona intestinalis] Length = 298 Score = 96.4 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 67/207 (32%), Gaps = 6/207 (2%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +YL D +++ NL ++ A+KC + + L G +S +E+ Sbjct: 49 FYLGDLGQVVRNLQMWTKHM--PKIRPYYAMKCNPSQPVVQLLASLGVGFDCASKFEIET 106 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + E + V K + + K K K+ LR+N Sbjct: 107 ALKCGVKPEDILFAVPCKMSSHIEYACQTGVQVMTVDNADELHKIKRIHPTGKLLLRLNV 166 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM---LKN 181 + D +K +S N+NG+ +H +SF C + K Sbjct: 167 CEFEEGVRMGDKFGASMSDAKKLVLLCKSLNLNLNGICYHPGSGVESFECIMSCLQQCKE 226 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKD 208 + ++ I +GGG + Sbjct: 227 LYDFAASNGVDLKTIDIGGGFLCGENF 253 >gi|29561807|emb|CAD87803.1| antizyme inhibitor 1 [Danio rerio] Length = 436 Score = 96.4 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 55/401 (13%), Positives = 121/401 (30%), Gaps = 49/401 (12%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + + D L+ V+ + C ++ + + L+ G ++ E L Sbjct: 40 FVVADLGALMRQHVVWKTTMPL--VRPFYPVSCNSSPVVIELLSALGVGFVCANKAETTL 97 Query: 66 GHEK-FGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E + K + + ++ ++L K + + + Sbjct: 98 VLSHDVPPENIILSGVCKQLSLIKHAAKTGINFLLCENEAELRKIARAHPEAKLLLQVST 157 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + L E K+ S V G+ F K ++ L + Sbjct: 158 EAQIEEASVTIGCSLKGCRHLLELAKELNVS----VAGVTFQVPASCKDPQAYTHALSDA 213 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPG 234 F + + +GGG ++ + +K ++ E Y I EPG Sbjct: 214 RCIFDMGKELGFDMNILDIGGGFSGSE--FQLKQVHSVIRPLLEAYFPSESGVSIIAEPG 271 Query: 235 EAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHVPDYLLYQ---------------- 276 V + TL V+ + D + P+++ Y Sbjct: 272 NFFVFSCFTLAVNVIGKKAAYRNLHTSTHDKLTSSDAPEFVYYMNDGVYGSFMGRLFGNI 331 Query: 277 ------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 ++ + +++ + G SC D E + +GD + F ++ Sbjct: 332 ISTPSVHKMSLTLDEPVFSSSLWGPSCDPLDQVVERCLLPELAVGDWLVFSNMGASGQEG 391 Query: 331 KNWFNGINMPTIAV-KNVDGTIKAIREF---SYNDYYNNLS 367 F+ + P + + D + + S +D NLS Sbjct: 392 PATFSDTDQPPVYYTISTDDWFEM--QEAGISLDDTMKNLS 430 >gi|300781330|ref|ZP_07091184.1| diaminopimelate decarboxylase [Corynebacterium genitalium ATCC 33030] gi|300533037|gb|EFK54098.1| diaminopimelate decarboxylase [Corynebacterium genitalium ATCC 33030] Length = 909 Score = 96.4 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 55/384 (14%), Positives = 118/384 (30%), Gaps = 64/384 (16%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P +++ + +L N+D + + GV K+ A K DT+ G +S Sbjct: 502 SPVNVLNPEPMLANVDELVSAGASTGVEVKIFFARKANKGLVFVDTMRDAGHGVDVASEN 561 Query: 62 EVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ + GE + A D ++ ++N I + V++L + A + Sbjct: 562 ELRQVLDRGVPGERIILSAAIKSDALLELAIANGVVISADNVTELERIIAIAGDRTALVA 621 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK-IESEIKNVNGLMFHNNCENKSFLCFS-A 177 R+ P + P R R + + V G+ H + + + Sbjct: 622 PRLAPDPTT-----MPPTRFGERSEVWAQRLSEPAGSVTVAGVHVHLHGYAAADRSAALR 676 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----------------------- 214 + + ++I +GGG+ + D + Sbjct: 677 ECVGLVDKLRASGHDPQFIDVGGGVPMSYLDDEEQWNHAQDSLRAMREGYAEPFTWKGDP 736 Query: 215 ---------------------CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 + + K ++++LEPG +++ + TV Sbjct: 737 LHNTYPYWQRPVRGAWLRDVLADGVAQELTKRGLRLHLEPGRSLLDGCGLILATVEFTKH 796 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIY-------PNTGPYTAMVCGRSCLAGDIFGEF 306 L +V ++ A + G C+ ++ Sbjct: 797 RSDGLPLVGLAMNRTQCRTTSDDYLVDPILVTDAPGSTDEEVEAFLVGAYCIEDEVILRR 856 Query: 307 --HFEKPVKIGDRISFEDVAGYNI 328 F + V+ GD ++ + AGY + Sbjct: 857 RIRFPRGVRPGDIVAIPNTAGYFM 880 >gi|259506368|ref|ZP_05749270.1| diaminopimelate decarboxylase [Corynebacterium efficiens YS-314] gi|259166046|gb|EEW50600.1| diaminopimelate decarboxylase [Corynebacterium efficiens YS-314] Length = 888 Score = 96.4 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 54/383 (14%), Positives = 112/383 (29%), Gaps = 62/383 (16%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ + N++ + GV ++ A K D + G +S Sbjct: 463 GSPVNVLHSGSMPRNINELVEAGAQMGVDTRIFFARKANKGLTFVDAVRDAGHGVDVASE 522 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ GE + A D ++ ++N I ++ + ++ A ++ Sbjct: 523 RELSQVLGRGVPGERIILSAAIKPDSLLELAIANGVVISADSRDEFDRIAALAGDSLARV 582 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-IESEIKNVNGLMFHNNCENKSFLCFS- 176 R+ P + P R R+G+ + ++ GL H + + + Sbjct: 583 APRVAPDPAT-----MPPTRFGERVGDWARHLAAPVPGVDIVGLHVHLHGYSAVDRAAAL 637 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD--------------------KDYPVKDFCQ 216 + +I LGGG+ + P Sbjct: 638 RECCELVDALTTAGHTPRFIDLGGGVPMSYLDSTEQWLKYQSARSAAVDGYADPFTWKSD 697 Query: 217 RLKEFSEKYSVQI------------------------YLEPGEAIVTNTTTLNTTVLDIS 252 L + + +LEPG +++ + V + Sbjct: 698 PLNTTYPYHQTPVRGPWLKQVLGDGVAEMLIERGLRLHLEPGRSLLDGCGLILAEVAFVK 757 Query: 253 ENIKNLV-----IVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF- 306 + + + DYL+ T + A + G C+ ++ Sbjct: 758 TRSDGVPLVGLAMNRTQCRTTSDDYLVDPLHITDEADGEEREAFLVGAYCIEDELILRRR 817 Query: 307 -HFEKPVKIGDRISFEDVAGYNI 328 F + VK GD I + AGY + Sbjct: 818 IRFPRGVKAGDIIGIPNTAGYFM 840 >gi|25027975|ref|NP_738029.1| hypothetical protein CE1419 [Corynebacterium efficiens YS-314] gi|23493258|dbj|BAC18229.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 894 Score = 96.4 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 54/383 (14%), Positives = 112/383 (29%), Gaps = 62/383 (16%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ + N++ + GV ++ A K D + G +S Sbjct: 469 GSPVNVLHSGSMPRNINELVEAGAQMGVDTRIFFARKANKGLTFVDAVRDAGHGVDVASE 528 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ GE + A D ++ ++N I ++ + ++ A ++ Sbjct: 529 RELSQVLGRGVPGERIILSAAIKPDSLLELAIANGVVISADSRDEFDRIAALAGDSLARV 588 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-IESEIKNVNGLMFHNNCENKSFLCFS- 176 R+ P + P R R+G+ + ++ GL H + + + Sbjct: 589 APRVAPDPAT-----MPPTRFGERVGDWARHLAAPVPGVDIVGLHVHLHGYSAVDRAAAL 643 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD--------------------KDYPVKDFCQ 216 + +I LGGG+ + P Sbjct: 644 RECCELVDALTTAGHTPRFIDLGGGVPMSYLDSTEQWLKYQSARSAAVDGYADPFTWKSD 703 Query: 217 RLKEFSEKYSVQI------------------------YLEPGEAIVTNTTTLNTTVLDIS 252 L + + +LEPG +++ + V + Sbjct: 704 PLNTTYPYHQTPVRGPWLKQVLGDGVAEMLIERGLRLHLEPGRSLLDGCGLILAEVAFVK 763 Query: 253 ENIKNLV-----IVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF- 306 + + + DYL+ T + A + G C+ ++ Sbjct: 764 TRSDGVPLVGLAMNRTQCRTTSDDYLVDPLHITDEADGEEREAFLVGAYCIEDELILRRR 823 Query: 307 -HFEKPVKIGDRISFEDVAGYNI 328 F + VK GD I + AGY + Sbjct: 824 IRFPRGVKAGDIIGIPNTAGYFM 846 >gi|303232781|ref|ZP_07319466.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Atopobium vaginae PB189-T1-4] gi|302481267|gb|EFL44342.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Atopobium vaginae PB189-T1-4] Length = 454 Score = 96.4 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 48/397 (12%), Positives = 109/397 (27%), Gaps = 47/397 (11%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGV------KLLLALKCFAAWGMFDTLNQYMDGTTS 57 TP Y+ + L I ++ V + ++K + + Sbjct: 48 TPTYIFNVPAFRARLAKTRDIVTSSDVNASARISMCYSMKANPF--LIAAAHSEHYKLEV 105 Query: 58 SSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 S E+ + G Y+ D A+ + + + QL A +L Sbjct: 106 CSPGELDICIAQHIPGARIVYSGVCKQPDDIRAALSYHVGVLTAESPLQLEAINRVATEL 165 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFL 173 H L + + E + G+ + + K Sbjct: 166 HAAGELAYSRVPILLRLNAKSQFGMAQSDLEALIAARNTFPLLEFVGIHYFVGTQRKKLA 225 Query: 174 CFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227 + I+ + + + + + G G+ + Sbjct: 226 RQQKELAFLSDLIDTLYDSYGWRAQLLEYGPGLAYPYFVDDDMSDTYAPARELAPLLQKL 285 Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDISE----------------NIKNLVIVDSSVEA 267 I +E G + + T + ++D+ + ++ L + Sbjct: 286 AQKVDICIEMGRFLASACGTYVSRIVDLKQGADSDSYYAFIDGGINHVAYLGQMMGLKCP 345 Query: 268 HVPDYLLYQESAT-------IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 H+ S P +CG C D+ FE P+ +GD ++F Sbjct: 346 HIDVVPGAAASVCEDTGVVQSAPARQMRRWTLCGSLCTTADVLVRE-FEAPLAMGDLLAF 404 Query: 321 EDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIRE 356 + + Y++ F +P++ + + +R+ Sbjct: 405 QHIGAYSVTEAMYLFLSRTLPSVVLYYDSEHYECVRK 441 >gi|302503565|ref|XP_003013742.1| hypothetical protein ARB_07853 [Arthroderma benhamiae CBS 112371] gi|291177308|gb|EFE33102.1| hypothetical protein ARB_07853 [Arthroderma benhamiae CBS 112371] Length = 425 Score = 96.0 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 44/371 (11%), Positives = 99/371 (26%), Gaps = 68/371 (18%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ ++D + + + GV E++ Sbjct: 53 PFCVMDLGYVHDQYEHWEKTL--PGVTPFY---------------------------ELV 83 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 L + + K N ++ K K ++ LR Sbjct: 84 LA-QGIPAARILFANPCKSPSDITFARNTGVNRMTFDNEAELHKIKQLFPESQLILRCFA 142 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + + L+ + + +S NV G+ FH + F +++ + Sbjct: 143 SDPSATYSLSAKFGAHPETSVRLLECAKSLRLNVIGVSFHIGSGARDPNAFEIAIESSRR 202 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F + + +GGG + + + L +V++ EPG Sbjct: 203 IFDAGIRIGHSMRLLDIGGGFSESTFEDMAASIQRSLDFHFRDINVELVAEPGRYFAAGA 262 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------------ 289 T+ ++ + + + + + +Y ++ P+ Sbjct: 263 MTIACEIIARRDAKEAPPSAEEASNMLYLNDGVYGTFSSSLFEPSPHPRVLRASGVFYPQ 322 Query: 290 --------AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVA--------------GY 326 ++ G +C D + + GD + F D+ Y Sbjct: 323 PAAGDQVKNILWGPTCDGVDCIAKDVELPERLTFGDWLYFPDMGVSYPCFLAFTDLMPAY 382 Query: 327 NINRKNWFNGI 337 + FNG Sbjct: 383 STCLATGFNGF 393 >gi|163803506|ref|ZP_02197376.1| carboxynorspermidine decarboxylase [Vibrio sp. AND4] gi|159172682|gb|EDP57533.1| carboxynorspermidine decarboxylase [Vibrio sp. AND4] Length = 149 Score = 95.6 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 66/142 (46%), Positives = 92/142 (64%), Gaps = 2/142 (1%) Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NT 285 Q+YLEPGEAI+T TT L TV+D+ EN K IVDS+ EAH D L+Y E A+I Sbjct: 3 QMYLEPGEAIITKTTDLVVTVVDVVENEKKTAIVDSATEAHRLDTLVYNEPASIREASEN 62 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 G Y ++ SCLAGD F +FE+P++IG R+ D AGY + + NWFNG+ MP+I + Sbjct: 63 GKYEYVIGSCSCLAGDQFCVTNFEQPIEIGQRLHILDSAGYTMVKLNWFNGLRMPSIYCE 122 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 +G ++ + EF Y+D+ +LS Sbjct: 123 RSNGEVQKLNEFDYSDFKRSLS 144 >gi|145296096|ref|YP_001138917.1| hypothetical protein cgR_2017 [Corynebacterium glutamicum R] gi|140846016|dbj|BAF55015.1| hypothetical protein [Corynebacterium glutamicum R] Length = 884 Score = 95.6 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 110/387 (28%), Gaps = 70/387 (18%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ + N++ + GV ++ A K D + G +S Sbjct: 478 GSPVNVLHSGSMPRNINELVDAGIEMGVDTRIFFARKANKGLTFVDAVKDTGHGVDVASE 537 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ GE + A D + + N I ++ +L++ ++ Sbjct: 538 RELSQVLNRGVPGERIILSAAIKPDRLLALAIENGVIISVDSRDELDRISALVGDRVARV 597 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMF-HNNCENKSFLCFSA 177 R+ P P +R GE+ D + + G+ + + Sbjct: 598 APRVAPDP---------AVLPPTRFGERAADWGNRLTEVIPGVDIVGLHVHLHGYAAKDR 648 Query: 178 MLKNIEKE-----FGHFITQIEWISLGGGIHF---------------------------- 204 L E ++I LGGG+ Sbjct: 649 ALALQECCQLVDSLRECGHSPQFIDLGGGVPMSYIESEEDWIRYQSAKSATSAGYAESFT 708 Query: 205 --------TDKDYPVKDFCQRLK--------EFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 T Y LK + ++++LEPG +++ V Sbjct: 709 WKDDPLSNTYPFYQTPVRGNWLKDVLSKGVAQMLIDRGLRLHLEPGRSLLDGCGVTLAEV 768 Query: 249 LDISENIKNLV-----IVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303 + L + + D+L+ T A + G C+ ++ Sbjct: 769 AFVKTRSDGLPLVGLAMNRTQCRTTSDDFLIDPLHITDGDVGEEIEAYLVGAYCIEDELI 828 Query: 304 GEFH--FEKPVKIGDRISFEDVAGYNI 328 F + +K GD I + AGY + Sbjct: 829 LRRRIRFPRGIKPGDIIGIPNTAGYFM 855 >gi|154246672|ref|YP_001417630.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2] gi|154160757|gb|ABS67973.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2] Length = 432 Score = 95.6 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 98/366 (26%), Gaps = 36/366 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEV 63 P Y L + + K A+K + D L + +S E Sbjct: 38 PVYCFRPHVLAADARAFVEAFPG---KTAYAVKTNGEPMVLDVLAKAGISAFDVASPAEF 94 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG---- 119 G Y K + I + ++ + + Sbjct: 95 AAARAAAPGAELLYMHPVKAQSDIRLALEHYRIRSTALDHEDEVAKIVRIVRALDLDPED 154 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-KNVN-GLMFHNNCENKSFLCFSA 177 L + ++ + ++ F + ++ + GL FH + + ++ Sbjct: 155 LTLFVRIASKGDAAYELSKKFGAAPGHAAELLQRIHGIGIKCGLCFHVGSQVEDPDTYAR 214 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---------KDFCQRLKEFSEKYSV- 227 + + I + +GGG T P + L E+ Sbjct: 215 AVAVAAEVRAAAGVPIVALDVGGGFPATYARNPRRPVPPMPPLDEIISGLMGAVERNGFA 274 Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISENIKN------------LVIVDSSVEAHVPDYL 273 + EPG IV ++ VL H+PD Sbjct: 275 GTPLVAEPGRVIVARAFSVIVRVLLKKGQRLYINDGIWSSLSDSWTGKILLPVRHIPDPA 334 Query: 274 LYQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331 + +G + G +C + D+ F V GD I + Y+++ + Sbjct: 335 RRRRPGRGASGSGRIEPFRIYGATCDSVDVLSRPFFLPESVDTGDWIEIGHIGAYSLSLR 394 Query: 332 NWFNGI 337 FNG Sbjct: 395 TRFNGF 400 >gi|62390971|ref|YP_226373.1| decarboxylase [Corynebacterium glutamicum ATCC 13032] gi|41326310|emb|CAF20472.1| decarboxylase [Corynebacterium glutamicum ATCC 13032] Length = 884 Score = 95.6 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 57/387 (14%), Positives = 110/387 (28%), Gaps = 70/387 (18%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ + N++ + GV ++ A K D + G +S Sbjct: 478 GSPVNVLHSGSMPRNINELVDAGIQMGVDTRIFFARKANKGLTFVDAVKDTGHGVDVASE 537 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ GE + A D + + N I ++ +L++ ++ Sbjct: 538 RELSQVLNRGVPGERIILSAAIKPDRLLALAIENGVIISVDSRDELDRISALVGDRVARV 597 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMF-HNNCENKSFLCFSA 177 R+ P P +R GE+ D + + G+ + + Sbjct: 598 APRVAPDP---------AVLPPTRFGERAADWGNRLTEVIPGVDIVGLHVHLHGYAAKDR 648 Query: 178 MLKNIEKE-----FGHFITQIEWISLGGGIHF---------------------------- 204 L E ++I LGGG+ Sbjct: 649 ALALQECCQLVDSLRECGHSPQFIDLGGGVPMSYIESEEDWIRYQSAKSATSAGYAESFT 708 Query: 205 --------TDKDYPVKDFCQRLK--------EFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 T Y LK + ++++LEPG +++ V Sbjct: 709 WKDDPLSNTYPFYQTPVRGNWLKDVLSKGVAQMLIDRGLRLHLEPGRSLLDGCGVTLAEV 768 Query: 249 LDISENIKNLV-----IVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303 + L + + D+L+ T A + G C+ ++ Sbjct: 769 AFVKTRSDGLPLVGLAMNRTQCRTTSDDFLIDPLHITDGDVGEEIEAYLVGAYCIEDELI 828 Query: 304 GEFH--FEKPVKIGDRISFEDVAGYNI 328 F + VK GD I + AGY + Sbjct: 829 LRRRIRFPRGVKPGDIIGIPNTAGYFM 855 >gi|23308900|ref|NP_601336.2| diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC 13032] gi|21324905|dbj|BAB99528.1| Diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC 13032] Length = 429 Score = 95.6 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 57/387 (14%), Positives = 110/387 (28%), Gaps = 70/387 (18%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ + N++ + GV ++ A K D + G +S Sbjct: 23 GSPVNVLHSGSMPRNINELVDAGIQMGVDTRIFFARKANKGLTFVDAVKDTGHGVDVASE 82 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ GE + A D + + N I ++ +L++ ++ Sbjct: 83 RELSQVLNRGVPGERIILSAAIKPDRLLALAIENGVIISVDSRDELDRISALVGDRVARV 142 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMF-HNNCENKSFLCFSA 177 R+ P P +R GE+ D + + G+ + + Sbjct: 143 APRVAPDP---------AVLPPTRFGERAADWGNRLTEVIPGVDIVGLHVHLHGYAAKDR 193 Query: 178 MLKNIEKE-----FGHFITQIEWISLGGGIHF---------------------------- 204 L E ++I LGGG+ Sbjct: 194 ALALQECCQLVDSLRECGHSPQFIDLGGGVPMSYIESEEDWIRYQSAKSATSAGYAESFT 253 Query: 205 --------TDKDYPVKDFCQRLK--------EFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 T Y LK + ++++LEPG +++ V Sbjct: 254 WKDDPLSNTYPFYQTPVRGNWLKDVLSKGVAQMLIDRGLRLHLEPGRSLLDGCGVTLAEV 313 Query: 249 LDISENIKNLV-----IVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303 + L + + D+L+ T A + G C+ ++ Sbjct: 314 AFVKTRSDGLPLVGLAMNRTQCRTTSDDFLIDPLHITDGDVGEEIEAYLVGAYCIEDELI 373 Query: 304 GEFH--FEKPVKIGDRISFEDVAGYNI 328 F + VK GD I + AGY + Sbjct: 374 LRRRIRFPRGVKPGDIIGIPNTAGYFM 400 >gi|271962014|ref|YP_003336210.1| diaminopimelate decarboxylase-like protein [Streptosporangium roseum DSM 43021] gi|270505189|gb|ACZ83467.1| Diaminopimelate decarboxylase-like protein [Streptosporangium roseum DSM 43021] Length = 276 Score = 95.2 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 52/180 (28%), Gaps = 15/180 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ + ++ A K F M + + G S E Sbjct: 50 GTPAYVLDETDVRERCRAYRAAL--PDAEIAYAAKAFLCRAMAGWVREEGLGLDVCSGGE 107 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKI 118 + F + ++ K + AV + I+ + ++++N+ +K+ Sbjct: 108 LTFACSIGFPADRIIFHGNAKTPQELRGAVAAGVGRIVVDNLAEINRLAALIPAGRRQKV 167 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCEN 169 LR+ P + + G + + GL Sbjct: 168 LLRVIPDIEGGAHEATRTGGEDQKFGLSVATGAAGQAVTRVLGQPSLKLAGLHCEAGDTI 227 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 1/51 (1%) Query: 292 VCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + G C AGD E ++ GD I Y+ + + +N P+ Sbjct: 216 LAGLHCEAGDTIAEDVELPADIRPGDVIVVAATGAYHHSMASTYNMTARPS 266 >gi|144897740|emb|CAM74604.1| ornithine decarboxylase [Magnetospirillum gryphiswaldense MSR-1] Length = 328 Score = 95.2 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 85/301 (28%), Gaps = 16/301 (5%) Query: 55 TTSSSLYEVMLGHEKFGGETHAYNVAYKDC---EIDAVLSNCDTIIFNTVSQLNKFKDKA 111 +S EV L + K + + ++ ++L K ++ Sbjct: 4 FDCASAGEVALVRHTLPRAQIHFMHPIKARSAIREAWERHDVRDFVVDSAAELGKVIEET 63 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-IKNVNGLMFHNNCENK 170 + ++G+ + ++ + + + + + G+ FH + Sbjct: 64 RHRPGRLGIIVRLALPKGSARYDLSGKFGADRDDAVALLRMAAAVAGRVGISFHVGSQCC 123 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 ++ L + + ++ + +GGG + D + ++ Sbjct: 124 DPAAWTRALDLTAEVLAAYGRPVDIVDVGGGFPVSYPDVTPPPLADFFAAIAAGFARLNL 183 Query: 231 LEPGEAIVTNTTTLNTT----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY---- 282 + L V+ I +++ ++ + + D Sbjct: 184 PAATQLWCEPGRALVAPGQSLVVRIEGRRGDMLYINDGIYGSLSDAGAPGFRFPCRLIRL 243 Query: 283 ---PNTGPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 G +C + D G F + GD I + Y + + FNG + Sbjct: 244 NGESVAADQPFAFFGPTCDSADRMNGPFLLPADSREGDWIEIGQLGAYGASLRTGFNGFD 303 Query: 339 M 339 + Sbjct: 304 L 304 >gi|55742262|ref|NP_001007160.1| antizyme inhibitor 1 [Danio rerio] gi|38541987|gb|AAH61960.1| Antizyme inhibitor 1 [Danio rerio] Length = 436 Score = 95.2 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 55/401 (13%), Positives = 121/401 (30%), Gaps = 49/401 (12%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + + D L+ V+ + C ++ + + L+ G ++ E L Sbjct: 40 FVVADLGALMRQHVVWKTTMPL--VRPFYPVSCNSSPVVIELLSALGVGFVCANKAETTL 97 Query: 66 GHEK-FGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E + K + + ++ ++L K + + + Sbjct: 98 VLSHDVPPENIILSGVCKQLLLIKHAAKTGINFLLCENEAELRKIARAHPEAKLLLQVST 157 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + L E K+ S V G+ F K ++ L + Sbjct: 158 EAQIEEASVTIGCSLKGCRHLLELAKELNVS----VAGVTFQVPASCKDPQAYTHALSDA 213 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPG 234 F + + +GGG ++ + +K ++ E Y I EPG Sbjct: 214 RCIFDMGKELGFDMNILDIGGGFSGSE--FQLKQVHSVIRPLLEAYFPSESGVSIIAEPG 271 Query: 235 EAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHVPDYLLYQ---------------- 276 V + TL V+ + D + P+++ Y Sbjct: 272 NFFVFSCFTLAVNVIGKKAAYRDLHTSTHDKLTSSEAPEFVYYMNDGVYGSFMGRLFGNI 331 Query: 277 ------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 ++ + +++ + G SC D E + +GD + F ++ Sbjct: 332 ISTPSVHKMSLTLDEPVFSSSLWGPSCDPLDQVVERCLLPELAVGDWLVFINMGASGQEG 391 Query: 331 KNWFNGINMPTIAV-KNVDGTIKAIREF---SYNDYYNNLS 367 F+ + P + + D + + S +D NLS Sbjct: 392 PATFSDTDQPPVYYTISTDDWFEM--QEAGISLDDTMKNLS 430 >gi|290955117|ref|YP_003486299.1| lysine/ornithine decarboxylase [Streptomyces scabiei 87.22] gi|260644643|emb|CBG67728.1| putative lysine/ornithine decarboxylase [Streptomyces scabiei 87.22] Length = 448 Score = 95.2 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 59/411 (14%), Positives = 121/411 (29%), Gaps = 78/411 (18%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 PY+++ ++ N + AGV ++ A K A + G +S E Sbjct: 32 PYHVLLPERFDANAAAFRRVFAEAGVDGRVYYAKKANKAAVYAERAAVAGLGVDVASQGE 91 Query: 63 VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + G + A D + + I + + +L++ A++L + + Sbjct: 92 LREALAAGVRGEDLVVTGPAKVDDLLRVAVLQGALIAVDALDELDRLLSLAEQLGRTARV 151 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-------FHNNCENKSFL 173 + SR G + + + V G + + + + Sbjct: 152 LLRRLPPGQPH---------SRFGLDDGELDAALRRCVTGPVEMEGFSFHLSGYDTRQRA 202 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGG----------------------------IHFT 205 +A + + + IS+GGG Sbjct: 203 DLAAESIGLCTRARALGLRADRISIGGGFAVDYVGAEEWRRFEESRRPEHFHAEKSFGGF 262 Query: 206 DKDYPVKDFCQRLKEFSEKYS-----------------VQIYLEPGEAIVTNTTTLNTTV 248 + L+ V + +EPG A++ V Sbjct: 263 YPYHSPVAGADALRTILATTPAGAGEGTTLAGLLRAAGVTLLVEPGRALLDQAGFTVFRV 322 Query: 249 LDISENIKNLVIVDSS----------VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCL 298 + E ++ +PD +L + + GPY A V +CL Sbjct: 323 QGVKERDGYALLTVDGSSLSLSEQWFDSEFLPDPVLVPAGSGPRADAGPYPACVGAATCL 382 Query: 299 AGDIFGEFHFEKPVKI--GDRISFEDVAGYNINRK-NWFNGINMPTIAVKN 346 D+ P++ GD + + + AGY ++ + F+ + +P AV Sbjct: 383 ESDMLTWRKVPFPLRPAAGDLLVYLNTAGYQMDSNESPFHDLPLPPKAVVE 433 >gi|18652917|dbj|BAB84695.1| antizyme inhibitor [Danio rerio] Length = 419 Score = 95.2 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 102/353 (28%), Gaps = 39/353 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + + D L+ V+ + C ++ + + L+ G ++ E L Sbjct: 40 FVVADLGALMRQHVAWKTTMPL--VRPFYPVSCNSSPVVIELLSALGVGFVCANKAETTL 97 Query: 66 GHEK-FGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E + K + + ++ ++L K + + + Sbjct: 98 VLSHDVPPENIILSGVCKQLSLIKHAAKTGINFLLCENEAELRKIARAHPEAKLLLQVST 157 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + L E K+ S V G+ F K ++ L + Sbjct: 158 EAQIEEASVTIGCSLKGCRHLLELAKELNVS----VAGVTFQVPASCKDPQAYTHALSDA 213 Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEKYSVQIYLEPGEA 236 F + + +GGG ++ F + V I EPG Sbjct: 214 RCIFDMGKELGFDMNILDIGGGFSGSEFQLKQVHSVIRPLLEAYFPSESGVSIIAEPGNF 273 Query: 237 IVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHVPDYLLYQ------------------ 276 V + TL V+ + D + P+++ Y Sbjct: 274 FVFSCFTLAVNVIGKKAAYRDLHTSTHDKLTSSEAPEFVYYMNDGVYGSFMGRLFGNIIS 333 Query: 277 ----ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 ++ + +++ + G SC D E + +GD + F ++ Sbjct: 334 TPSVHKMSLTLDEPVFSSSLWGPSCDPLDQVVERCLLPELAVGDWLVFINMGA 386 >gi|41582267|gb|AAS07881.1| hypothetical protein MBMO_EBAC080-L32B05.9 [uncultured marine bacterium 463] Length = 426 Score = 95.2 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 119/364 (32%), Gaps = 15/364 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP + D + + N + LLA+K + T Q++ G S+L Sbjct: 62 LSTPALVFDLDTITARMQALAQTAANQNIACLLAVKSCPREPLLTTAQQHLAGFDVSNLA 121 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E G+T + + + + ++ S Q LR Sbjct: 122 EYRALPADLSGKTVSLTSPQLTKDYYLFAARGNRLVVTVDSIAQCVNYLQQGAPFPYVLR 181 Query: 122 INPSV----SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 I S + + + + E+ + + + + G H+ E S + Sbjct: 182 IQGGQLLPTSDAAYTNCSRFGFTAPMLEQLLQRPDVQAQPPCGWHVHHGSEINSAATYQF 241 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 ++ + K I+LGGG H +K F K F E +++EPG+ Sbjct: 242 LMAGLAKLGAQLPEPPAIINLGGGWHSVEKQQLNDLFALARKVFPEPC--SVFIEPGQWF 299 Query: 238 VTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 V++ S + NL V + S++ H+ P + G S Sbjct: 300 GKGAGLAVGEVVNKSGDDDNLGCVLNLSMDCHLRWSSPRLLVPVQLPALKFAKVYLGGAS 359 Query: 297 CLAGDIFGEFHFE--------KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 C D G F + +G R+ +++ Y++ FNGI T Sbjct: 360 CYEADSLGCFMLPYRQDLAHDTSLGLGCRVLLSNISLYSLAWNQGFNGIAPATEYWLRNG 419 Query: 349 GTIK 352 ++ Sbjct: 420 LALE 423 >gi|257413467|ref|ZP_05591664.1| protein TabA [Roseburia intestinalis L1-82] gi|257203426|gb|EEV01711.1| protein TabA [Roseburia intestinalis L1-82] Length = 148 Score = 94.8 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 3/126 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP++L D++ + N N G + A+K + D L +Y G +SL Sbjct: 20 PTPFHLYDEKGIRENAKAVKEAFSWNPGFREYFAVKATPNPYILDILKEYDCGCDCASLT 79 Query: 62 EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ML + F G+ ++ E I + + ++ + K+ + I Sbjct: 80 ELMLADSQGFDGKHIMFSSNDTPAEEFKFANELGAIINLDDFTHIDFLEKTIGKIPETIS 139 Query: 120 LRINPS 125 R NP Sbjct: 140 CRYNPG 145 >gi|253317600|gb|ACT22738.1| ornithine decarboxylase [Oncorhynchus mykiss] Length = 291 Score = 94.8 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 67/229 (29%), Gaps = 31/229 (13%) Query: 147 CKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIH 203 ++ + +V G+ FH +S + + F + + +GGG Sbjct: 23 LLERAKELGLDVIGVSFHVGSGCTDPDTYSQAISDARCVFDMGSEVGFNMTLLDIGGGFP 82 Query: 204 FTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 ++ + K F ++I EPG V + TL ++ + Sbjct: 83 GSEDTKLKFEEITAVINPALDKYFPADSGIRIIAEPGRYYVASAYTLAVNIIAKKVIMNE 142 Query: 258 LVIVDSSVE-----AHVPDYL-----------LYQESATIYPNTGPYT------AMVCGR 295 D + + + P + G Sbjct: 143 QSASDEDDDWTSDRTLMYYVNDGVYGSFNCILYDHAHPLPILHKKPKPDERMYHCSIWGP 202 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 +C D E +++G+ + FE++ Y + + FNG P I Sbjct: 203 TCDGLDRIAEMCTLPDMQVGEWLLFENMGAYTVAASSTFNGFQKPDIYY 251 >gi|387499|gb|AAA39846.1| ornithine decarboxylase (EC 4.1.1.17) [Mus musculus] Length = 284 Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 70/231 (30%), Gaps = 30/231 (12%) Query: 147 CKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIH 203 ++ + +V G+ FH F + + F + + +GGG Sbjct: 3 LLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARCVFDMATEVGFSMHLLDIGGGFP 62 Query: 204 FTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS----- 252 ++ + K F V+I EPG V + TL ++ Sbjct: 63 GSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKTVWKE 122 Query: 253 --------------ENIKNLVIVDSSVEAHVPDYLLYQE--SATIYPNTGPYTAMVCGRS 296 V S + D+ + P+ Y++ + G + Sbjct: 123 QPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVKALLQKRPKPDEKYYSSSIWGPT 182 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 C D E + +GD + FE++ Y + + FNG P I Sbjct: 183 CDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYYVMS 233 >gi|167948474|ref|ZP_02535548.1| diaminopimelate decarboxylase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 334 Score = 94.4 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 99/332 (29%), Gaps = 34/332 (10%) Query: 58 SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLH 115 S +E GE +N +K EI + + + + ++ + A ++ Sbjct: 2 VSAFEYEKARSHGVPGERILFNGPHKQREILERVVAEGARVHIDNLDEMYTLEAIAAEVG 61 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---EKCKDKIESEIKNVNGLMFHNNCENKSF 172 + I + I + G + + S + GL H Sbjct: 62 RTIPVTIRLNFDTGYTEPWSRFGFNIETGQALDAARRIGNSPHLRLRGLHSHIGTFILDT 121 Query: 173 LCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY------------------- 209 + M +E +I+ I +GGG + + Sbjct: 122 RAYEAQVRIMCAFMETAESETGCEIDSIDIGGGFASRNALHGTYLPPEQVVPEIEQYAQA 181 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVE 266 R + K + LE G A V + +L ++V+ V + Sbjct: 182 ICDTLLEATRGRTARGKPQPTLILETGRATVDDAGSLISSVVATKHLPDGRRSAVLDAGV 241 Query: 267 AHVPDYLLYQESATIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + Y + P ++ G C+ D+ P+++G+R+ V Sbjct: 242 NLLFTSFWYNHRVELAQPPQGIPEETVLYGPLCMNIDVVRASVTLPPLRVGERLVVSPVG 301 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 YN + F P + + + G + IR+ Sbjct: 302 AYNNTQWLQFIEY-RPNVVMTHGGGEVSVIRQ 332 >gi|261819928|ref|YP_003258034.1| Orn/DAP/Arg decarboxylase 2 [Pectobacterium wasabiae WPP163] gi|261603941|gb|ACX86427.1| Orn/DAP/Arg decarboxylase 2 [Pectobacterium wasabiae WPP163] Length = 588 Score = 94.1 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 38/373 (10%), Positives = 88/373 (23%), Gaps = 25/373 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P+++ D L K + +++K + + + S E Sbjct: 27 PFFIFDADAALERARHLTAACKEYFPDAVIAVSVKSCSLGIFLRLIAEEGLSAEVCSADE 86 Query: 63 VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 L F G+ + YK + A+ + + + + K Sbjct: 87 FKLAIKAGFTGDRIILDGPYKNSEDLSIALDKGALIHVDSAHELSEIIRLLSGHNQKIGV 146 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 E ++ G H ++ + L Sbjct: 147 GVRLSHFYSDTQRSRFGVTAEEFWDEIVPLLTSCPDISLRGFHLHTGSNLENPSKVTDSL 206 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE---------KYS 226 ++ + + + +G G P ++ Sbjct: 207 RDWLPFLVKNMPEGGHLDMGSGFPADSFSPVVDVPTVQPSAFFRDIFSVLSEYDPALPEK 266 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 ++ EPG + + L + + VI + +P + S N Sbjct: 267 WKLVFEPGRTLSEDHGYAVGKTLSVKNRYDSQVIQTNLGINWIPSVHNWHHSLLPLGNNK 326 Query: 287 PYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 ++ G +C D + Y++ N + P + Sbjct: 327 RIPDDTGQILAGFNCFENDSLFPRGPLH-LDDNQLFIIRGCGAYDLQTANEW-TRTRPPV 384 Query: 343 AVKNVDGTIKAIR 355 ++ I R Sbjct: 385 YAL-LNKEIITAR 396 >gi|163803044|ref|ZP_02196930.1| carboxynorspermidine decarboxylase [Vibrio sp. AND4] gi|159173218|gb|EDP58047.1| carboxynorspermidine decarboxylase [Vibrio sp. AND4] Length = 121 Score = 94.1 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 54/110 (49%), Positives = 80/110 (72%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +KTPY++I++ KL+ NL+ A ++ +GVKL+LALKCF+ WG+FD + Y+DG+TSS + Sbjct: 6 LKTPYFMINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGSTSSGPF 65 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 EV LG+E FGGETHAY+V Y + ++ V CD +IFN+ SQL ++ Sbjct: 66 EVRLGYETFGGETHAYSVGYSEDDVLEVADICDKLIFNSQSQLAAYRHIV 115 >gi|218263200|ref|ZP_03477398.1| hypothetical protein PRABACTJOHN_03081 [Parabacteroides johnsonii DSM 18315] gi|218222876|gb|EEC95526.1| hypothetical protein PRABACTJOHN_03081 [Parabacteroides johnsonii DSM 18315] Length = 147 Score = 94.1 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 3/117 (2%) Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--YQESATIYP 283 Q++ EPG +IV +L + VL + + D+ + + Y I Sbjct: 23 QQVHFEPGRSIVAQCGSLISKVLYVKVGETKKFCILDAGFTELIRPAMYDAYHRMENITS 82 Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + V G C + D+FG+ GD I+ Y + +N +P Sbjct: 83 DEEVEVYDVVGPICESSDVFGKDVELNRAHRGDLIALRSAGAYGEVMASQYNCRKLP 139 >gi|163757174|ref|ZP_02164275.1| diaminopimelate decarboxylase [Kordia algicida OT-1] gi|161322850|gb|EDP94198.1| diaminopimelate decarboxylase [Kordia algicida OT-1] Length = 140 Score = 94.1 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 3/124 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P Y+ D K+ + + +KL A+K + + + G + S+ Sbjct: 14 GSPTYVYDASKITSQYERLTKAFAAVPKLKLHYAVKALSNLSILKLMKSLGAGLDTVSIQ 73 Query: 62 EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV LG F Y EI+ I + +S L +F K + I Sbjct: 74 EVQLGLAAGFDASEIMYTPNGVSLQEIEQAAQLGVKINIDNLSILEQFGSKHPTIPVCIR 133 Query: 120 LRIN 123 + + Sbjct: 134 INPH 137 >gi|322800554|gb|EFZ21546.1| hypothetical protein SINV_13532 [Solenopsis invicta] Length = 306 Score = 93.7 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 91/290 (31%), Gaps = 21/290 (7%) Query: 72 GETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYS 129 GE + YK + + ++ +L K K+ K I +R + S Sbjct: 10 GERIIFAHPYKLPSHIKFSKQMGVEQMTVDSEFELKKIKNFFPKAKIVIRIRCDAKKSSV 69 Query: 130 KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF--- 186 P+ + + N+ G FH + ++ ++ Sbjct: 70 SLGEKFGCEPY-KEAVRLIRYTRDLGLNLYGFSFHVGTTCLEMDAYRRGIEICKQLIVIA 128 Query: 187 -GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVTNTTT 243 +E I +GGG + + + + E ++ EPG V + T Sbjct: 129 KSIGCNNVELIDIGGGFLSVCGKE-LDELAEFINGAIENLDPGIRVISEPGRYYVDSNFT 187 Query: 244 LNTT-------VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GPYTAMV 292 L + + + + + + + + + Q + + V Sbjct: 188 LASYLHSKRLAISENGKLKRMYYMNCGVNNSFMEELKGVQARVPELIFEPMSNEKFLSNV 247 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 G + D+ + + IGD + ++++ Y + N FNG +P + Sbjct: 248 WGPTADPHDLIVKNVSLPELYIGDWLVWKNMGAYTLVLSNTFNGFPIPAV 297 >gi|307702982|ref|ZP_07639929.1| protein tabA [Streptococcus oralis ATCC 35037] gi|307623375|gb|EFO02365.1| protein tabA [Streptococcus oralis ATCC 35037] Length = 111 Score = 93.7 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 27/102 (26%), Gaps = 4/102 (3%) Query: 269 VPDYLLYQESATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + + V G C D F +IGD + D Sbjct: 1 MRPAMYGAYHHITNLTHPDGPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGA 60 Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366 + + +N + +G + IR DY+ L Sbjct: 61 HGFSMGYQYNAKLRSAEILYTEEGKTRQIRRAERPEDYFATL 102 >gi|306822088|ref|ZP_07455471.1| diaminopimelate decarboxylase [Bifidobacterium dentium ATCC 27679] gi|309802513|ref|ZP_07696618.1| diaminopimelate decarboxylase [Bifidobacterium dentium JCVIHMP022] gi|304554637|gb|EFM42541.1| diaminopimelate decarboxylase [Bifidobacterium dentium ATCC 27679] gi|308220830|gb|EFO77137.1| diaminopimelate decarboxylase [Bifidobacterium dentium JCVIHMP022] Length = 524 Score = 93.7 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 66/266 (24%), Gaps = 35/266 (13%) Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHF 189 L + ++ + G+ H F M+ + + Sbjct: 254 MTMVADGPALAVLKDIQRHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATD 313 Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIV 238 + + LGGG D + + I EPG V Sbjct: 314 AYTLPEVDLGGGYSVAYTDGEDSMDIDVELGRLADAVTTVNRALGMPAPVISFEPGRWTV 373 Query: 239 TNTTTLNTTVLDISE---------------NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 T V + + + V VD + ++ L + Sbjct: 374 APTGVTLYRVGTVKPVRLNGDATDKAGNPVHERVYVSVDGGMSDNIRPALYGSDYTARLA 433 Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGIN 338 N V G C +GDI + GD ++ Y + +N Sbjct: 434 NRKGSDDTKLCRVVGMHCESGDIVVNEVRLPADITRGDILAVPVTGVYGRTMASNYNQAL 493 Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364 +P + IR S +D + Sbjct: 494 IPAVVGIGETDAHVMIRRQSIDDLLS 519 Score = 77.1 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 9/154 (5%) Query: 3 KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +P Y+ID ++ N + A K + + + + + Sbjct: 34 GSPLYVIDTDEVRARASKFVTSASNAFNNTVTHVSFAGKALLSKEICRIVTEAGMLIDTC 93 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 ++ E+ + G + K E A+ I+ + ++ + D A++L Sbjct: 94 TMGEMRIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVVDEPNEPARIADIAKRLG 153 Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147 K+ LR+ + + G Sbjct: 154 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 187 >gi|332254722|ref|XP_003276481.1| PREDICTED: arginine decarboxylase-like [Nomascus leucogenys] Length = 377 Score = 93.7 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 84/255 (32%), Gaps = 12/255 (4%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L Q G + ++ E+ L Sbjct: 41 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + K + + + +++ K K+ L I Sbjct: 99 VQQIGVPASKIICANPCKQIAQIKYAAKHGIRLLSFDNEMELAKVVKSHPSAKMVLCIAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 159 DDSHSLSRLSLKFGVSLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQVYAQSIADARL 218 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG T D + F E V ++ E G Sbjct: 219 VFEMGTELGHKMHVLDLGGGFPGTKGAKVRFDQIASVINSALDLYFPEGCGVDVFAELGR 278 Query: 236 AIVTNTTTLNTTVLD 250 VT+ T+ +++ Sbjct: 279 YYVTSAFTVAISIIA 293 >gi|322497353|emb|CBZ32428.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 707 Score = 93.3 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 21/261 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ID +++ + + + V+ A+K + + L+ G +S E+ Sbjct: 258 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315 Query: 65 LGHEK---FGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + K +A + + ++ K H I Sbjct: 316 MVLGHQLVASPDDIIFANPCKQLGDLREAQACGVTYVTVDNPLEMEKISRLMPSAHAIIR 375 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 ++ N S + F G + V G+ FH N + + + Sbjct: 376 IKTNDSKAQCSFSTKFGAPLEDVEG--LLEAARQFNVTVCGVSFHVGSGNDDQSAYVSAV 433 Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSEKYS----V 227 ++ + F + + + +GGG T+ + + ++ + V Sbjct: 434 RDAYQVFQQAVQYGFKCTILDIGGGFPGTEVVEGSGNTSFEAIARTIRPVLAELFGGGDV 493 Query: 228 QIYLEPGEAIVTNTTTLNTTV 248 I EPG + L V Sbjct: 494 TIISEPGRYFTAASHALLMNV 514 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 20/46 (43%) Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C + D + +K+GD + D+ Y +FNG Sbjct: 629 IFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAAGFFNGF 674 >gi|302664901|ref|XP_003024075.1| hypothetical protein TRV_01774 [Trichophyton verrucosum HKI 0517] gi|291188104|gb|EFE43457.1| hypothetical protein TRV_01774 [Trichophyton verrucosum HKI 0517] Length = 425 Score = 93.3 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 44/371 (11%), Positives = 99/371 (26%), Gaps = 68/371 (18%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+ ++D + + + GV E++ Sbjct: 53 PFCVMDLGYVHDQYEHWEKTL--PGVTPFY---------------------------ELV 83 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 L + + K N ++ K K ++ LR Sbjct: 84 LA-QGIPAARILFANPCKSPSDITFARNVGVNRLTFDNEAELHKIKQLFPESQLILRCFA 142 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + + L+ + + +S NV G+ FH + F +++ + Sbjct: 143 SDPSATYSLSAKFGAHPEASVRLLECAKSLRLNVIGVSFHIGSGARDPNAFEIAIESSRR 202 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 F + + +GGG + + + L +V++ EPG Sbjct: 203 IFDAGIRIGHSMRLLDIGGGFSESTFEDMAASIQRSLDFHFCDVNVELVAEPGRYFAAGA 262 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------------ 289 T+ ++ + + + + + +Y ++ P+ Sbjct: 263 MTIACEIIARRDAKEAPPSAEEASNMLYLNDGVYGTFSSSLFEPSPHPRVLRASGVFYPQ 322 Query: 290 --------AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVA--------------GY 326 ++ G +C D + + GD + F D+ Y Sbjct: 323 PAAGDQVKNILWGPTCDGVDCIAKDVELPERLTFGDWLYFPDMGVNYPCFLAFTDLMPAY 382 Query: 327 NINRKNWFNGI 337 + FNG Sbjct: 383 STCLATGFNGF 393 >gi|298711201|emb|CBJ32423.1| conserved unknown protein [Ectocarpus siliculosus] Length = 314 Score = 92.9 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 81/304 (26%), Gaps = 36/304 (11%) Query: 96 IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI 155 I ++SQL K ++A +G+R NP + + P S G + E + Sbjct: 5 INACSLSQLRKIAEEA--PGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKE 62 Query: 156 KN----VNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 + H + + S + + + + ++LGGG Sbjct: 63 ICAGGDLTVSRIHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVTTLNLGGGYKVGRMSGEQ 122 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV-------------LDISENIKNL 258 Q + E G + V + Sbjct: 123 STDLQAIGAPVMGDFEAFAEETGRKLKLEIEPGTFLVANAGSLVCTAQDLVSTGSGGYEF 182 Query: 259 VIVDSSVEAHVPDYLLYQESATIY------PNTGPYTAMVCGRSCLAGDIF--------- 303 + +D+ + + L + +V G C +GD+ Sbjct: 183 IKLDAGMTELLRPSLYGALHPIVVVPAEGEGGGETAEYVVVGHCCESGDLLTPVSGAASE 242 Query: 304 GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAI-REFSYND 361 E +IGD + E Y +N + + G + + R + Sbjct: 243 IERRTLAKAEIGDLVVVEGCGAYVAGMSAKNYNSFPEVPEVLLDSAGELHVVRRRQTLEQ 302 Query: 362 YYNN 365 + N Sbjct: 303 IFEN 306 >gi|167840073|ref|ZP_02466757.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia thailandensis MSMB43] Length = 1193 Score = 92.9 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 9/185 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP ++ D++ L + L + ++G +LL LK F+ G + + ++DG +SS + Sbjct: 729 LDTPAFVYDERALRDALSAMHALLGDSGCRLLYPLKPFSHAGALECIAPHVDGFAASSPF 788 Query: 62 EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E G H A D ++ A++ NCD + N++SQ + A G Sbjct: 789 EAAFSRALLGRAGSIHLTTPALSDRDLGAIVDNCDYVALNSLSQWGRL-HAAFAGRLSCG 847 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSFL 173 LRINP S DP RP S+LG + ++ + G+ FH NC++ F Sbjct: 848 LRINPQYSVVADARYDPCRPHSKLGVPLDAMERAVADDPRALQGLQGIHFHTNCDSPDFW 907 Query: 174 CFSAM 178 Sbjct: 908 SACRN 912 >gi|156324878|ref|XP_001618506.1| hypothetical protein NEMVEDRAFT_v1g3350 [Nematostella vectensis] gi|156199145|gb|EDO26406.1| predicted protein [Nematostella vectensis] Length = 254 Score = 92.9 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 64/202 (31%), Gaps = 6/202 (2%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D ++ + + V A+KC + + TL+ G +S E+ L Sbjct: 40 FYVADLGDIVK--KHVRWFKALPRVTPFYAVKCNDSKAIVKTLSLLGAGFDCASKTEIQL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y K ++C S++ K + K+ LRI Sbjct: 98 VQSIGVSSERIIYANPCKQVSQIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ + ++ + ++ G+ FH + + + Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNVDIIGVSFHVGSGCTDPQTYVQAVSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIH 203 F + + +GGG Sbjct: 218 VFDMGAELGFNMHLLDIGGGFP 239 >gi|255324705|ref|ZP_05365819.1| decarboxylase [Corynebacterium tuberculostearicum SK141] gi|255298180|gb|EET77483.1| decarboxylase [Corynebacterium tuberculostearicum SK141] Length = 462 Score = 92.9 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 52/419 (12%), Positives = 121/419 (28%), Gaps = 78/419 (18%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ L +N L + V ++ A K A D G +S Sbjct: 43 GSPVNALNPAPLRHNAQELLNAGASHDVETQVFFARKANKALCFVDAARDAGLGVDVASE 102 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + E + A D + +S TI ++ ++ ++ A+ L Sbjct: 103 NELRQVLDRGVAPERIILSAAIKTDGLLRLAVSRGVTISCDSRAESHRIAAIARDLDTTA 162 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 + + P R RL + + V G+ H + +++ + Sbjct: 163 RVAPRLAPDPDSLP---PTRFGERLP-AWRQAEWPQELRVVGVHVHLHGYSEADRRTALA 218 Query: 179 LK-NIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEF-------------- 221 + + ++I +GGG+ + + + +R+ Sbjct: 219 EAIALIEHVRALGQPADFIDIGGGVPMSYLESREQWEYYLERIASQRTGTGKPFTWKADP 278 Query: 222 ----------------------------------SEKYSVQIYLEPGEAIVTNTTTLNTT 247 + + ++LEPG +++ + Sbjct: 279 LSNTYPFWQEPTRGQWLDQLLSGEVPGYGTAGTALRERDIALHLEPGRSLLDGCGVILAE 338 Query: 248 VLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSC 297 V I + ++ + + L+ + P T V G C Sbjct: 339 VSFLKERSDGLPLIGVAMNRTQCRTAADDILLDPLLVPTAGPAKEISREPRTGFVVGAYC 398 Query: 298 LAGDIFGEFH--FEKPVKIGDRISFEDVAGYNI----NRKNWFNGINMPTIAVKNVDGT 350 + ++ F + +GD ++ + AGY + + + I + + D Sbjct: 399 IEDEVILRRELDFPDGIAVGDTLAIPNTAGYFMHILESASHQ---IPLARNVYYDGDDW 454 >gi|146080148|ref|XP_001463945.1| ornithine decarboxylase [Leishmania infantum JPCM5] gi|321399074|emb|CBZ08415.1| putative ornithine decarboxylase [Leishmania infantum JPCM5] Length = 707 Score = 92.9 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 83/261 (31%), Gaps = 21/261 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ID +++ + + + V+ A+K + + L+ G +S E+ Sbjct: 258 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315 Query: 65 LGHE----KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIG 119 + + N + ++ + + + ++ K H I Sbjct: 316 MVLGRQLVASPDDIIFANPCKQLGDLREAQACGVTYVTVDNPLEMEKISRLMPSAHAIIR 375 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 ++ N S + F G + V G+ FH N + + + Sbjct: 376 IKTNDSKAQCSFSTKFGAPLEDVEG--LLEAARQFNVTVCGVSFHVGSGNDDQSAYVSAV 433 Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSEKYS----V 227 ++ + F + + + +GGG T+ + + ++ + V Sbjct: 434 RDAYQVFQQAVQYGFKCTILDIGGGFPGTEVVEGSGNTSFEAIARTIRPVLAELFGGGDV 493 Query: 228 QIYLEPGEAIVTNTTTLNTTV 248 I EPG + L V Sbjct: 494 TIISEPGRYFTAASHALLMNV 514 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 20/46 (43%) Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C + D + +K+GD + D+ Y +FNG Sbjct: 629 IFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAAGFFNGF 674 >gi|118378|sp|P27116|DCOR_LEIDO RecName: Full=Ornithine decarboxylase; Short=ODC gi|159388|gb|AAA29259.1| ornithine decarboxylase [Leishmania donovani] Length = 707 Score = 92.9 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 83/261 (31%), Gaps = 21/261 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ID +++ + + + V+ A+K + + L+ G +S E+ Sbjct: 258 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315 Query: 65 LGHE----KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIG 119 + + N + ++ + + + ++ K H I Sbjct: 316 MVLGRQLVASPDDIIFANPCKQLGDLREAQACGVTYVTVDNPLEMEKISRLMPSAHAIIR 375 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 ++ N S + F G + V G+ FH N + + + Sbjct: 376 IKTNDSKAQCSFSTKFGAPLEDVEG--LLEAARQFNVTVCGVSFHVGSGNDDQSAYVSAV 433 Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSEKYS----V 227 ++ + F + + + +GGG T+ + + ++ + V Sbjct: 434 RDAYQVFQQAVQYGFKCTILDIGGGFPGTEVVEGSGNTSFEAIARTIRPVLAELFGGGDV 493 Query: 228 QIYLEPGEAIVTNTTTLNTTV 248 I EPG + L V Sbjct: 494 TIISEPGRYFTAASHALLMNV 514 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 20/46 (43%) Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C + D + +K+GD + D+ Y +FNG Sbjct: 629 IFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAAGFFNGF 674 >gi|227818599|ref|YP_002822570.1| LysA, diaminopimelate decarboxylase LysA [Sinorhizobium fredii NGR234] gi|36958854|gb|AAQ87279.1| Y4yA [Sinorhizobium fredii NGR234] gi|227337598|gb|ACP21817.1| putative LysA, diaminopimelate decarboxylase LysA [Sinorhizobium fredii NGR234] Length = 457 Score = 92.9 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 55/410 (13%), Positives = 107/410 (26%), Gaps = 66/410 (16%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P L+ L NL + + G + +K + G+ G SSL Sbjct: 39 GSPLNLVWPDALQKNLAALKGVLTERRVGHAVYYGVKVNKSLGLMRAALSAGAGLDVSSL 98 Query: 61 YEVMLGH--EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ G A A ++ I ++ +L D Sbjct: 99 CELRDARRLGAEGVRLVATGPAKTSAFHKELIDCSALISVDSPEELEDLIDGLPADAGPQ 158 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN-NCENKSFLCFSA 177 + + + P + +GL FH ++ + + Sbjct: 159 PILLRLR--PRDQSKSRFGMPGDAVVHCLARLTAENRLRFDGLHFHLSGYRWETRVAALS 216 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKD----------------------------- 208 ++ + I +GGG+ D Sbjct: 217 EAADLITKARRMGFSPRMIDIGGGLPIQYVDQVKYRAHLAAQAPEDYRTGKIPDSFYPYG 276 Query: 209 -------------YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT-------- 247 Q + + + + + +EPG A+ Sbjct: 277 GTLSPADWLHRLLEAEMSQGQSVAGYLAREGLTLAMEPGRALTDQAAITVFRISRVKALG 336 Query: 248 ----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303 V+ + + + + E V L+ + P A + G SCL D+ Sbjct: 337 PDSHVIFVEGSSFSACETWFASEFLVDPILVPVTRP--AAQSPPIRAYLAGHSCLDEDVI 394 Query: 304 GEFH--FEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMPTIAVKNVDGT 350 F + GD + + + GY ++ +N F+ MP D Sbjct: 395 SNRWLTFPIAPQAGDLLVYANTGGYQMDLLENEFHRHPMPARLCVIDDAE 444 >gi|213027179|ref|ZP_03341626.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 365 Score = 92.9 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 110/362 (30%), Gaps = 56/362 (15%) Query: 9 IDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 + +++ N+ K A K + G+ + ++S YEV Sbjct: 2 FSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQYEVRKCL 61 Query: 68 E-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHK--KIGLRI 122 E F G+ +N K D I +++ +L ++KL K + +R+ Sbjct: 62 EIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVANVCVRV 121 Query: 123 NPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 P+V + A + E C+ + ++ GL H + F+ Sbjct: 122 EPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVPESEPFA 181 Query: 177 AMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPV---------------KDFCQR 217 K + E + + I++GGGI K +DF Sbjct: 182 KATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITAQDFADA 241 Query: 218 LKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISENIKNLV 259 + K+ I +EPG + + L T V + + Sbjct: 242 VIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEWKFVDAG 301 Query: 260 IVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFHFEKPVK 313 S H D+ Y +A+ + G C GD F EF K Sbjct: 302 YSVLSDSQHF-DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFLLPKETH 360 Query: 314 IG 315 +G Sbjct: 361 VG 362 >gi|331236585|ref|XP_003330951.1| ornithine decarboxylase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309309941|gb|EFP86532.1| ornithine decarboxylase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 525 Score = 92.5 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 79/267 (29%), Gaps = 6/267 (2%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ D + N V+ A+KC + L Q G +S E+ + Sbjct: 64 FYVCDLAYVYRQYLRWQEALGNR-VEPFFAVKCNPDSLVLKLLAQLGTGFDCASHAEIEM 122 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + Y K + +Q K + ++ LRI Sbjct: 123 VLKLGVEPSRIIYANPCKAGSFVRHAHAKGVQMMTFDNQDELEKVAKFHPNARMVLRILT 182 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S S L + ++ + V G+ FH + L ++ + + Sbjct: 183 DDSGSLCRLGEKFGAPLENVRGLLERAKELDVAVIGVAFHVGSGCSNPLLYTDAVGRAKW 242 Query: 185 EFG---HFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 F +++ +GGG + K F V++ EPG VT Sbjct: 243 TFELGQELGFHFDFLDVGGGFGDDNFDLLAEGLLVGLDKYFPVGCGVRVIAEPGRYFVTR 302 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEA 267 L T ++ + +V A Sbjct: 303 AFELATNIIARRKAPTPPPSSLVAVTA 329 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 7/75 (9%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEK--PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + G SC + D+ + +GD + + ++ Y I + FNG + + Sbjct: 444 ELCKIFGPSCDSIDLVSPATLLPTNRLLVGDWLRWPNMGAYTICAASQFNGFKISQVVYT 503 Query: 346 NVD-----GTIKAIR 355 D +R Sbjct: 504 IGDPSVDEKVRHILR 518 >gi|22203509|gb|AAM92262.1| ornithine decarboxylase [Zea mays] Length = 339 Score = 92.5 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 80/266 (30%), Gaps = 12/266 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ +D V+ A+KC L +S E+ Sbjct: 58 PFYVLDLGEVVSLMDQWNVAL--PNVRPFYAVKCNPEPSFLSMLAAMGSNFDCASRAEIE 115 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + K A + +++ ++ K K K + ++ Sbjct: 116 YVLSLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPKCELLLRIK 175 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177 + + E ++ V+G+ FHN N +A Sbjct: 176 PMNDGNARCPMGPKY-GALPEEIEPLLRIAQASRLTVSGVSFHNGSGDADSNAYLGAIAA 234 Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + E +++I + +GGG + FS + + I EPG Sbjct: 235 AKQVFETAAKFGMSKINVLDIGGGFTSGHQFTTAATAVKSALQQHFSNEPELTIIAEPGR 294 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV 261 TL TT++ Sbjct: 295 FFAETAFTLATTIIGKRVRGDLREYW 320 >gi|157865853|ref|XP_001681633.1| ornithine decarboxylase [Leishmania major strain Friedlin] gi|68124931|emb|CAJ02515.1| putative ornithine decarboxylase [Leishmania major strain Friedlin] Length = 707 Score = 92.5 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 81/261 (31%), Gaps = 21/261 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ID +++ + + + V+ A+K + + L+ G +S E+ Sbjct: 258 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315 Query: 65 LGHE---KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + K +A + + ++ K H I Sbjct: 316 MVLGRHLVASPDDIIFANPCKQLGDLCEAQACGVTYVTVDNPLEMEKIGRLMPSAHVIIR 375 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFS 176 ++ N S + F G V G+ FH N +L Sbjct: 376 IKTNDSKAQCCFSTKFGAPLEDVDG--LLKVARQLNVAVCGVSFHVGSGNDDQSAYLSAV 433 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEFSEKYS----V 227 ++ ++ + + + +GGG T+ + + + ++ + V Sbjct: 434 RDAYHVFQQAAQYGFKCTLLDIGGGFPGTEVVQGSGNTSFEIIARTIRPVLAELFGGGDV 493 Query: 228 QIYLEPGEAIVTNTTTLNTTV 248 I EPG + L V Sbjct: 494 TIISEPGRYFTAASHALLMNV 514 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 20/46 (43%) Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C + D + +K+GD + D+ Y +FNG Sbjct: 629 IFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAAGFFNGF 674 >gi|5360176|gb|AAD42894.1|AF159564_1 ornithine decarboxylase [Leishmania tarentolae] Length = 732 Score = 92.1 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 28/213 (13%), Positives = 68/213 (31%), Gaps = 12/213 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ID +++ + + + V+ A+K + + L+ G +S E+ Sbjct: 283 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQAAVLEVLSALGAGFDCASREEIQ 340 Query: 65 LGHE----KFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + N + +A + + ++ K + Sbjct: 341 MVLRNNLVATPDDIIFANPCKQLSDMREAQACGVTYVTVDNPLEMEKISRV--MPSARAI 398 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +RI + S ++ + E V G+ FH N + + + Sbjct: 399 IRIKTNDSKAQCSFSTKFGASLEDVEGLLQVARQFNVAVCGVSFHVGSGNYDESAYVSAV 458 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDY 209 ++ + F + + +GGG T+ Sbjct: 459 RDAYQVFQQAAKYGFHCTILDIGGGFPGTEAVE 491 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%) Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C + D + +K+GD + D+ Y FNG Sbjct: 654 IFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAAGVFNGF 699 >gi|253690265|ref|YP_003019455.1| Orn/DAP/Arg decarboxylase 2 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756843|gb|ACT14919.1| Orn/DAP/Arg decarboxylase 2 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 467 Score = 92.1 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 57/421 (13%), Positives = 114/421 (27%), Gaps = 78/421 (18%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ + NN+ + + +L K + G+ G SSL Sbjct: 51 GSPLNIVWPHTVANNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNAGVGVDVSSL 110 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ G A A + A++ + I+ ++ + ++ A L Sbjct: 111 QELKDALRAGCDGARLCATGPAKTREFLMALVHHRALIVLDSPEEFDEVLALADVLRVTE 170 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCENK 170 +R+ SR G + I + + G FH Sbjct: 171 PVRVLLR-------YRPSFAQASRFGMLADEAARCLETLSIRQDAFRLEGFHFHLGGYEP 223 Query: 171 SFLCFSAMLKNI-EKEFGHFITQIEWISLGGGIHFTD----------------------- 206 + ++ Q I +GGG+ Sbjct: 224 DTRVAALSEVLPLLEQARAKGLQPAIIDIGGGLPIQYLPASRYQDYLAKQNGADYRHGQV 283 Query: 207 --KDYPVKDFCQR----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 YP C + E +++ + + +EPG ++ + V Sbjct: 284 PTSFYPYGGECSATDYLEAFLSASIGDTRVAEVLKQHGLILAIEPGRSLADQSAITVFRV 343 Query: 249 LDISENIKNLVIVD------------SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 +V + E + ++ P A + G S Sbjct: 344 TRTRRQPDGNHVVFVEGSSFSACETWFNSEFLIDPLHVFS--VKKDTPPTPGKAWIAGHS 401 Query: 297 CLAGDIFGEFH--FEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKNVDGTIKA 353 CL D+ F + GD + + + AGY ++ F+ +P + Sbjct: 402 CLDDDVITNRLIHFRTVPQPGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGEL 461 Query: 354 I 354 I Sbjct: 462 I 462 >gi|331011410|gb|EGH91466.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 213 Score = 92.1 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 56/191 (29%), Gaps = 10/191 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D + K+ A+K A + + L +S+YE Sbjct: 25 ETPFVVIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + G E +Y K + ++ + L A + Sbjct: 83 LDKVMSCGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177 + + + + I + + G+ FH + + + A Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199 Query: 178 MLKNIEKEFGH 188 + ++ F Sbjct: 200 AIAKVKVIFER 210 >gi|149528855|ref|XP_001516497.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus] Length = 344 Score = 92.1 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 81/263 (30%), Gaps = 12/263 (4%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC + G+ TL + G +S E+ L Sbjct: 42 FFVADLGDVVR--KHLRFLKALPRVQPFYAVKCNGSRGVVKTLAELGTGFDCASKKEIEL 99 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G Y K + + +++ K + ++ L I Sbjct: 100 VQSIGVPGHKIIYANPCKQISHIKYAARHGVQVMTFDNEVELAKVAKRYPGARMVLSIAT 159 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S L + + + V G+ FH F+ + + Sbjct: 160 DEFKSPAHLNIKFGATLKSCRHLLETAKKMNVEVIGISFHVGSACCDPQAFTQAIADARL 219 Query: 185 EF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 F ++ + LGGG + ++ F E V+I EPG Sbjct: 220 VFEMGAELGYRMHLLDLGGGFPGPENSTVRFEELASVINSALDLYFPEGCGVEIIAEPGR 279 Query: 236 AIVTNTTTLNTTVLDISENIKNL 258 V ++ TL ++ Sbjct: 280 YYVASSFTLAVNIIAKEHIPSEH 302 >gi|123416580|ref|XP_001304924.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein [Trichomonas vaginalis G3] gi|121886409|gb|EAX91994.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein [Trichomonas vaginalis G3] Length = 192 Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 62/175 (35%), Gaps = 6/175 (3%) Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQ 228 F + ++ + + ++ + +GGG+ + + + ++ + + Sbjct: 7 FEKLVLFIHDLLELYRSKGINVKILDVGGGLGVSYTNPNLLPDFEKYFKIFSSLSPKVEE 66 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES--ATIYPNT 285 I+ E G +I+ +L T +L I + +N IVD + + L + Sbjct: 67 IHFELGRSIICQCGSLVTKLLYIKQGMERNFAIVDGGMTELIRPALYNAFHLVENVTHPG 126 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 Y V G C + D+ K GD + Y + + + ++P Sbjct: 127 NDYEFDVVGPVCESSDVIAHSVKMGDAKRGDYVIIRSAGAYGESMASSYLCRDIP 181 >gi|1401268|gb|AAB65826.1| ornithine decarboxylase [Nicotiana tabacum] Length = 245 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 70/219 (31%), Gaps = 20/219 (9%) Query: 145 EKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200 + ++ V+G+ FH N +A + E ++++ + +GG Sbjct: 18 DPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAAAKEVFETAAKLGMSKMTVLDVGG 77 Query: 201 GI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 G V + F ++ + I EPG TL TT++ + Sbjct: 78 GFTSGHQFTTAAVAVKSALKQHFDDEPELTIIAEPGRFFAETAFTLATTIIGKRVRGELR 137 Query: 259 VIV-----DSSVEAHVPDYLLYQESA---------TIYPNTGPYTAMVCGRSCLAGDIFG 304 S+ + D+ + + + V G +C A D Sbjct: 138 EYWINDGLYGSMNCVLYDHATVNATPLAVLSNRSNVTCGGSKTFPTTVFGPTCDALDTVL 197 Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + +++ D + F ++ Y + FNG N I Sbjct: 198 RDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTSAIV 236 >gi|322489360|emb|CBZ24619.1| putative ornithine decarboxylase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 717 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 78/261 (29%), Gaps = 21/261 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y+ID +++ + + + V+ A+K + + L+ G +S E+ Sbjct: 267 PFYMIDLGRIVEQMARWRH--ELPMVRPYFAVKSNPKPAVMEVLSALGAGFDCASKEEIH 324 Query: 65 LGHE---KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + + + K +A + + ++ K I Sbjct: 325 MVLGRHLVASPDDIIFANPCKQFGDLCEAQACGVTYVTVDNPLEMEKIGRLMPSARAIIR 384 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + N S + F G V+G+ FH N + + + Sbjct: 385 ITTNDSKAQCSFSTKFGAPLEDVEG--LLQAARQYNVTVHGVSFHVGSGNDDHSAYVSAV 442 Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSEKYS----V 227 ++ F + + +GGG TD + + ++ + V Sbjct: 443 RDAYHVFQQAAQYGFNCTLLDIGGGFPGTDIVEGSGNTSFEAIARAIRPILVELFGGGDV 502 Query: 228 QIYLEPGEAIVTNTTTLNTTV 248 I EPG + L V Sbjct: 503 TIISEPGRYFTAASHALLMNV 523 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%) Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C + D + +K+GD + D+ Y FNG Sbjct: 638 IFGPTCDSMDCILKKRPFPEMKLGDWLLVPDMGSYTTAAAGVFNGF 683 >gi|227832186|ref|YP_002833893.1| putative diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC 700975] gi|262183962|ref|ZP_06043383.1| putative diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC 700975] gi|227453202|gb|ACP31955.1| putative diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC 700975] Length = 462 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 51/418 (12%), Positives = 107/418 (25%), Gaps = 70/418 (16%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ L N L + GV ++ A K A D + G +S Sbjct: 42 GSPVNVLHPAPLGRNAQELLDAGASHGVDTQVFFARKANKALCFVDAAREAGLGVDVASE 101 Query: 61 YEVMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA----QKL 114 E+ E + A D + + TI ++ ++ + A Sbjct: 102 NELRQVLNRGVAPERIILSAAIKTDALLRLAIDRGVTISCDSRAEAERIAALAKALNHTA 161 Query: 115 HKKIGLRINPSVSYSK------FILADPNRPFSRLGE-----------------KCKDKI 151 H L NP P + + + Sbjct: 162 HVAPRLAPNPDNLPPTRFGELLHAWQSHAWPETIHADGVHVHLHGYSESDRRTALAEAIA 221 Query: 152 ESEIKNVNGL-----MFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGG-IHFT 205 E + G E+ E + + T Sbjct: 222 LIEHLRLVGQPASFIDIGGGVPMSYLESREQWEYFQERIAAQRAGTGEPFTWKSDPLSNT 281 Query: 206 DKDYPVKDFCQRLKE--------------FSEKYSVQIYLEPGEAIVTNTTTLNTTVLD- 250 + + L + ++ ++LEPG +++ + V Sbjct: 282 YPFWQTPTRGEWLNHLLSGEVAGFGPAGRALSERNISLHLEPGRSLLDGCGIILAEVSFL 341 Query: 251 ---------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 I + ++ + + L+ + P T V G C+ + Sbjct: 342 KERSDGLPLIGAAMNRTQCRTAADDILLDPLLVPTAGERGAVDREPRTGFVVGAYCIEDE 401 Query: 302 IFGEFH--FEKPVKIGDRISFEDVAGYNI----NRKNWFNGINMPTIAVKNVDGTIKA 353 + F + + +GD ++ + AGY + + + I + + DG Sbjct: 402 VILRRELDFPEGIAVGDTLAIPNTAGYFMHILESASHQ---IPLARNVYLDADGRDWV 456 >gi|295115564|emb|CBL36411.1| Diaminopimelate decarboxylase [butyrate-producing bacterium SM4/1] Length = 99 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 1/79 (1%) Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + + G C D F + +GD + D + + +NG + Sbjct: 9 DHKYDITGSLCENNDKFAIDRMLPKIDLGDLLVIHDTGAHGFSMGYNYNGKLRSAELLLR 68 Query: 347 VDGTIKAIRE-FSYNDYYN 364 DG+I+ IR + DYY Sbjct: 69 EDGSIQMIRRAETPRDYYA 87 >gi|260911530|ref|ZP_05918117.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 472 str. F0295] gi|260634364|gb|EEX52467.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 472 str. F0295] Length = 118 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 60/106 (56%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +++P Y++++ KL NL + A V+++LA K FA W F +Y+ TT+SSL Sbjct: 11 VRSPMYIVEEAKLRRNLQLIASVATRADVEIILAFKAFALWKTFPIFKEYIRSTTASSLS 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF 107 E L E+FG H Y+ AY D EI + + + FN+++Q ++ Sbjct: 71 EAKLAFEEFGSRAHTYSPAYTDDEIGEIANCSSHLTFNSLTQYERY 116 >gi|290958498|ref|YP_003489680.1| decarboxylase [Streptomyces scabiei 87.22] gi|260648024|emb|CBG71132.1| putative decarboxylase [Streptomyces scabiei 87.22] Length = 374 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 112/357 (31%), Gaps = 24/357 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH- 67 ++ ++ + ++ A + +++ A+K + D + G ++ S E+ L Sbjct: 2 VELDRIADGVNLAREA--HPRIRVTYAVKASYHRPILDAVRAAGAGVSAFSEMEMALART 59 Query: 68 EKFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGLRI-- 122 KF YN ++ A + T+ ++++L +A +IG R+ Sbjct: 60 AKFAPYDIVYNGVGREGADLATAVDAGVTVNLESLAELRGLLHARRADASAGRIGFRVNG 119 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC----ENKSFLCFSAM 178 D + + G+ FH+ + Sbjct: 120 CVPGESDTLGKYGVLGISVAQLPTVADLLRGSGLVLGGVSFHHLANRLDGTAHLDTLDRL 179 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEKYSVQIYLEPGE 235 + + GH +++I +GGG+ + + F LE G Sbjct: 180 IPALAPLSGHPAVALDYIDVGGGLASRLEVGDESAVEMFRALADRIDADLDCTTILELGR 239 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAM 291 +V + +L + V+D+ + +V + + ++ ++ + Sbjct: 240 FLVADAESLLSRVVDMRTSGGVMVAILDATTNYLIPAPGHRFRVERLEPLAQGETRTPVR 299 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348 R G E P++ G + + Y K F +P ++ D Sbjct: 300 FVDRL---GSTICEN-HCGPLRPGTLVGVLNAGAYAGVMKEHF-VYPLPDVSFVRDD 351 >gi|289674139|ref|ZP_06495029.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae FF5] Length = 243 Score = 91.4 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 21/225 (9%) Query: 2 IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 ++T P ++ D L ++ + AGV+L A+K + M +TL + G S Sbjct: 18 LETDPLAAFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76 Query: 59 SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 S E+ + + ++ D ++ + L + I +++++ + + A++ + Sbjct: 77 SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLHKVEAIHLESLNEIARLQQLAEQAGR 136 Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + L E + + + G H Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHVHAMS 196 Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD 206 S +L + + + Q+ ++GGGI Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALARDPGQLTHFNVGGGIGVDY 241 >gi|158312520|ref|YP_001505028.1| diaminopimelate decarboxylase [Frankia sp. EAN1pec] gi|158107925|gb|ABW10122.1| Diaminopimelate decarboxylase [Frankia sp. EAN1pec] Length = 453 Score = 91.4 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 56/415 (13%), Positives = 105/415 (25%), Gaps = 76/415 (18%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL---------------NQY 51 YL + +LL A+K A + D L Sbjct: 40 YLYSPAVAAARAAELRRHLPD-WAELLFAVKANAFPPILDALLAGTASTDAGTAAGAGAG 98 Query: 52 MDGTTSSSLYEVMLGHEKF-----------------GGETHAYNVAYKDCEIDAVLSN-- 92 +DG SS +E++L GG + K + L Sbjct: 99 IDGFEVSSAHELVLAAAAVERARQRGAVRAAGQHPSGGARLVASGPGKSVSLLRALLGAV 158 Query: 93 --------CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILA-DPNRPFSRL 143 D + + +L + A + ++ + + + + + + Sbjct: 159 PVEGAVPAVDVVNAESPLELRRIDAVAAETGRRAAVALRVNPARVGLSGSLRMGGRPTAF 218 Query: 144 GEKCKD-------KIESEIKNVNGLMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQ 192 G + +D ++ G H N L ++ Sbjct: 219 GIQERDVPAAVELARSLPWIDLVGFHVHAVSGNLDATAHLDYVRWCLDFAVRQARLGDVD 278 Query: 193 IEWISLGGGIHFTDKD-------YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN 245 + + +GGG+ + + + F L + V++ EPG A+V + Sbjct: 279 LRVVDVGGGLGVPFEPDRLGERPFDLDVFGAGLDQLRPPTGVRVVFEPGRALVADCGWYA 338 Query: 246 TTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATIYPNT-----------GPYTAMV 292 V D+ V H +P + + P V Sbjct: 339 AEVTDVKLVHGGAFAVLRGGIHHFQLPTSWEIVHNFAVVPRDDWLPGWPRPEVAAGPVTV 398 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKN 346 G C D ++ GD + F Y F G V + Sbjct: 399 VGELCTPEDTLARDVTVDRLRAGDVVVFPMAGAYGYEFAMHEFLGHPRAHRVVVD 453 >gi|225387838|ref|ZP_03757602.1| hypothetical protein CLOSTASPAR_01608 [Clostridium asparagiforme DSM 15981] gi|225046055|gb|EEG56301.1| hypothetical protein CLOSTASPAR_01608 [Clostridium asparagiforme DSM 15981] Length = 94 Score = 91.4 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 1/78 (1%) Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + V G C D F V GD + D + +NG + Sbjct: 5 DHMYDVVGSLCENNDKFAIDRMLPKVDKGDLLVIHDTGAHGFAMGYNYNGKLKSAELLLK 64 Query: 347 VDGTIKAIRE-FSYNDYY 363 DG+++ IR + DY+ Sbjct: 65 EDGSVQMIRRAETPKDYF 82 >gi|296393673|ref|YP_003658557.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] gi|296180820|gb|ADG97726.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] Length = 396 Score = 91.0 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 44/345 (12%), Positives = 94/345 (27%), Gaps = 35/345 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 T ++D+ ++ + ++ + + A + L + S E Sbjct: 50 GTACDIVDEAEVRAHATAYQAAL--PNGEIAYSSRALLAPAIASWLAEEGLSLDVGSADE 107 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + F A K E A + +V ++ A ++ K + Sbjct: 108 LAVALRGGFPASRIIAGGAVKTREELAAALAAG-VGRISVDTFDELAWLASRIEKPQQIL 166 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + +S + A S E + V GL H + + +L Sbjct: 167 LRVGLSE-ELEQAFGFPLSSLAEEAWLRAHRQKNLRVVGLHCHVGSGS-HEQALAVLLDF 224 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 +E + + ++LGGG+ E + + ++ +EPG+ +V Sbjct: 225 LEHMRSAHGLEAQQLNLGGGVSVETAQ-------ALAVERAAQPLPRLIVEPGQGVVGQA 277 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 T V+ + + V R LA D Sbjct: 278 GTRLVRVIAKNFGTSGEPCAHVDG-----PLPISGAVPPSCTGADLDEVRVVNRHSLAAD 332 Query: 302 I-----------------FGEFHFEKPVKIGDRISFEDVAGYNIN 329 + ++ GD ++F Y+ Sbjct: 333 VPTRLLSRPRAESHGPADAARVPLPADLRAGDLLAFPGCGAYHHA 377 >gi|56118620|ref|NP_001007944.1| antizyme inhibitor 1 [Xenopus (Silurana) tropicalis] gi|51513230|gb|AAH80451.1| oazin protein [Xenopus (Silurana) tropicalis] gi|89270945|emb|CAJ81895.1| antizyme inhibitor 1 [Xenopus (Silurana) tropicalis] Length = 442 Score = 91.0 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 106/346 (30%), Gaps = 29/346 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ I ++C ++ + + L G ++ E+ L Sbjct: 40 FFVADLGKIVKKHFKWKNIMGRVN--PFYTVRCNSSPAVLEILAALSMGFACANKNEMSL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 ++ E Y K + + S+ K + K+ L I Sbjct: 98 VYDLGIPMENAVYTNPCKQASQIKHAAKIGVNLMTCDSETELKKIARNHFNAKLLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS--FLCFSAMLKNI 182 + + + + + V G+ FH + N ++ + + + Sbjct: 158 EGISGEEDMNMTFGTTLKNCRHLLECAKELSVEVVGVKFHVSSSNNPQTYIHALSDARCV 217 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTN 240 ++ + +GG + + L F E +I EPG V++ Sbjct: 218 FDMAEELGFKMNILDIGGISENEAQLEELYQAVSPLLDVYFPEGSGTRIIAEPGSFYVSS 277 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY------------------ 282 TL V+ + + + + + +Y + +Y Sbjct: 278 AFTLAVNVMAKNVIEHDQHLPSAGKQISNKPAFIYCMNEGVYGSFARKLSEKLNTAPEVH 337 Query: 283 ----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 + + + + G S D+ E +++GD + FE++ Sbjct: 338 KKYKDDEPLFASSLLGPSYDELDVIVEHCLLPELEVGDWVVFENMG 383 >gi|170290124|ref|YP_001736940.1| Orn/DAP/Arg decarboxylase 2 [Candidatus Korarchaeum cryptofilum OPF8] gi|170174204|gb|ACB07257.1| Orn/DAP/Arg decarboxylase 2 [Candidatus Korarchaeum cryptofilum OPF8] Length = 344 Score = 91.0 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 131/346 (37%), Gaps = 25/346 (7%) Query: 14 LLNNLDTALYIRKNAGVK-LLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGG 72 L + Y + L + K +++ L + SS+ E+ G Sbjct: 6 LSRRVALRQYSIARSYCDALAYSYKTNP--HIWEVLKETDSMVGVSSI----ASMERVEG 59 Query: 73 ETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSK 130 E Y + + + + I + +L KF ++ +K+ L I + Sbjct: 60 ERAVYYLQGEREDEISYLLDRGVRWFIVDNEPELGKFIKVVERRGEKVNLFIRIKMREHT 119 Query: 131 --FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188 R + ++I S++ + G+ FH +N + ++ +++ + Sbjct: 120 IYTGKHFVYGIDWRKVPRIMEEIRSDLIDQLGIHFHRKTQN---VGEWSLKEDVSEALAD 176 Query: 189 FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 + +I+WI++GGGI + V LKEF +++ +EPG I + Sbjct: 177 SLERIDWINIGGGIPVKYANSKPEVEAVLREIGELKEFLNSRGIKLMMEPGRFIAAPSVA 236 Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMVCGRSCLAGDI 302 L VL++ E L S A++ YLL + G + ++ GRS + DI Sbjct: 237 LEAEVLNVYEGNVILDC--SIFNAYMDTYLLNIRLPVLGELEGGGFRYLLKGRSPDSLDI 294 Query: 303 FGEFHFE-KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 F + + +K GD++ F + YN FN + + + + Sbjct: 295 FRYSVYLDRELKPGDKVIFLNAGAYNF--HTEFNDMPKIRVEIVDD 338 >gi|15858869|gb|AAL08052.1| ornithine decarboxylase-like protein variant 3 [Homo sapiens] gi|119627874|gb|EAX07469.1| arginine decarboxylase, isoform CRA_a [Homo sapiens] Length = 362 Score = 90.6 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 85/255 (33%), Gaps = 12/255 (4%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L Q G + ++ E+ L Sbjct: 41 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H K + + + +++ K K+ L I Sbjct: 99 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 159 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG T+ + + F E V I+ E G Sbjct: 219 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 278 Query: 236 AIVTNTTTLNTTVLD 250 VT+ T+ +++ Sbjct: 279 YYVTSAFTVAVSIIA 293 >gi|260829307|ref|XP_002609603.1| hypothetical protein BRAFLDRAFT_87824 [Branchiostoma floridae] gi|229294965|gb|EEN65613.1| hypothetical protein BRAFLDRAFT_87824 [Branchiostoma floridae] Length = 259 Score = 90.6 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 72/253 (28%), Gaps = 42/253 (16%) Query: 135 DPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFIT 191 K + +V G+ FH F+ +++ + F + Sbjct: 1 MKFGCHPSQAPKLLEVAAQLDLSVVGVSFHVGSGCLEASAFARGVESARRIFNIADQYGF 60 Query: 192 QIEWISLGGGIHFTDKD-YPVKDFCQRLKEFSEKYSVQ-----IYLEPGEAIVTNTTTLN 245 + + +GGG + + L +++ I EPG V + T+ Sbjct: 61 DFDMLDIGGGFPGQESAAISFDEIVADLGPALDEHFPPASGVRIIAEPGRYFVASAFTVA 120 Query: 246 TTVLDISE-------------------------------NIKNLVIVDSSVEAHVPDYLL 274 ++ V S + D+ Sbjct: 121 VNIVAKRMVARDIQEFKDEEAEDAVMNSVAPSMCEEPAFMYYVNDGVYGSFNCLLYDHAA 180 Query: 275 YQESATIYPNTGP--YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 S + ++ V G +C D E +++GD I FED+ Y + + Sbjct: 181 VTPSLMRDVDKEEALFSTSVWGPTCDGLDRIMEHCLLPELQVGDWILFEDMGAYTMAAAS 240 Query: 333 WFNGINMPTIAVK 345 FNG + P+ Sbjct: 241 TFNGFSKPSCYYV 253 >gi|320037813|gb|EFW19750.1| pyridoxal-dependent decarboxylase [Coccidioides posadasii str. Silveira] Length = 396 Score = 90.6 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 35/305 (11%) Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKKIGLRINPSVS 127 Y +K + + ++ + A + ++ LR+ Sbjct: 8 GVEPHRILYAAPFKSEDGILYAKQHG-VTQTMFDTEDELRKLADYFPNAELYLRLWADDP 66 Query: 128 YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF- 186 S+ L ++ + V GL FH F + + + + Sbjct: 67 SSRVRLGSKYGVQLPQAKELLVLAQELNMKVIGLCFHVGSSAADFDAYRQAIAFTREVYD 126 Query: 187 ------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEAIVT 239 I I +GGG + + + ++++ ++ ++ EPG Sbjct: 127 FNQSLREDQRHPIRTIDIGGGFSLGNFESAATVIRKSIRQYFGDEKHLRWVAEPGRYFAE 186 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSV-----EAHVPDYLLYQE----------------- 277 L VL + + + H+ D + + Sbjct: 187 EAFYLVCRVLGTRPRACLGNGIGADEKLPVGDIHINDGIYHNFLNALTEQVVPQPILLNC 246 Query: 278 --SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334 + + V G++C + D K+GD + F + Y + F Sbjct: 247 TGTPYVSAADNGDPYTVWGQTCDSFDKIATNCVLPRRAKVGDWLCFPFMGAYTHVTGSDF 306 Query: 335 NGINM 339 NG Sbjct: 307 NGFPR 311 >gi|329935163|ref|ZP_08285154.1| lysine/ornithine decarboxylase [Streptomyces griseoaurantiacus M045] gi|329305232|gb|EGG49090.1| lysine/ornithine decarboxylase [Streptomyces griseoaurantiacus M045] Length = 455 Score = 90.2 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 117/399 (29%), Gaps = 61/399 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P++L+ ++ N + AGV ++ A K A D G + E Sbjct: 45 PFHLLLPERFDANAAAFEGVLHEAGVEGRVYYAKKANKAAVWMDRCALSGRGVDVAGAGE 104 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120 + GE K ++ V I + + +L +A+ + + Sbjct: 105 LRDALGHGVRGEHLVVTGPAKAGDLLRVAVLQGCLIAVDALDELENVLAQARTAARPARV 164 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + + + + + V G FH L SA + Sbjct: 165 LLRRLPPAQPHSRFGLDGGELKTAL-ARCAQARDAVVVEGFSFHL-SGYDPSLRASAAGE 222 Query: 181 NIEKEF--GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----------- 227 +E + + IS+GGG + L+E ++ Sbjct: 223 LVELCLKARAMGHRADRISIGGGFAVDY--TDAGHWEAFLREQRPEHYHAGRSFDPADFY 280 Query: 228 ------------------------------QIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 Q+ LEPG A++ V + + Sbjct: 281 PYHSPVAGAAALRAVLAADGLAGRLREAGVQLLLEPGRALLDRAGCTVFRVQGVKDRDGY 340 Query: 258 LVIVDSSVEAHVPDYLLYQES-------ATIYPNTGPYTAMVCGRSCLAGDI--FGEFHF 308 ++ + + E P+ PY A V G +CL D+ + + F Sbjct: 341 GIVTVDGSSLSLSEQWFDSEYLPDPVLLPRHEPHGEPYAACVGGATCLESDMVSWRKVRF 400 Query: 309 EKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKN 346 + D + + + AGY ++ + F+ + +P V + Sbjct: 401 PRRPAADDLLVYPNTAGYQMDSNESPFHELPLPPKVVLD 439 >gi|317506305|ref|ZP_07964119.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC BAA-974] gi|316255399|gb|EFV14655.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC BAA-974] Length = 454 Score = 90.2 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 49/407 (12%), Positives = 107/407 (26%), Gaps = 63/407 (15%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 ++++ NL + ++ + A K + + + G +SL E Sbjct: 32 FHVVHPPTFARNLADFQAVFTEFEIEGLVYFAKKANKSTAWLRAVAEAGAGVDVASLGEF 91 Query: 64 MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKF-------------- 107 GE A D + + + I + +S+L + Sbjct: 92 RSALGHGVRGEKLVVTGPAKSDELLWLAVRHGALIAVDELSELERAIAFGSQEQPVRVLL 151 Query: 108 ------------------KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD 149 + A G + DP + G + Sbjct: 152 RAVAAEQPDTRFGMSGPERKAAVHRCADAGAAVRMEGFSLHLSGYDPLARAVKAGRLAVE 211 Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT---- 205 ++ + + + E G + GG + Sbjct: 212 IGQARALGLPADTISIGGGFAVDYVRQEDWEAFQAETGPSQFHAKKEFPGGFYPYHSPVS 271 Query: 206 ------------DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 + E +++ +EPG A++ + V Sbjct: 272 GAGALAEVLTSRYGSEGPDLREATIAEALRAKGIKLAVEPGRALLADAGVSVFEVQGFKW 331 Query: 254 NIKNLVIVDSSVEAHV-----PDYLLYQESATIYPNTGPY---TAMVCGRSCLAGDIFGE 305 + + + + ++P G + V G SCL D+ Sbjct: 332 REHLQYGIATVAGTSLSLSEQWFASEFLPEPRLWPEGGAQQRTPSAVGGTSCLDSDMLTW 391 Query: 306 FH--FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDG 349 +P K GD + + + AGY ++ + F+ + +P V ++ G Sbjct: 392 RKLPLPRPPKRGDFLVYPNTAGYQMDSNESAFHELPIPKKVVLDLTG 438 >gi|50123034|ref|YP_052201.1| putative lysine/ornithine decarboxylase [Pectobacterium atrosepticum SCRI1043] gi|49613560|emb|CAG77011.1| putative lysine/ornithine decarboxylase [Pectobacterium atrosepticum SCRI1043] Length = 467 Score = 90.2 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 54/421 (12%), Positives = 110/421 (26%), Gaps = 78/421 (18%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ + NN+ + + +L K + G+ G SSL Sbjct: 51 GSPLNIVWPHTVTNNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNAGIGVDVSSL 110 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ G A A + ++ + I+ ++ + + A L Sbjct: 111 QELKDALRAGCDGARLCATGPAKTREFLTELVHHRALIVLDSPEEFDDVLALAALLRVTK 170 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENK 170 +R+ SR G + ++ G FH Sbjct: 171 PVRVLLR-------YRPSFAQASRFGMLADEVARCLETLSTRQDVLHLEGFHFHLGGYAP 223 Query: 171 SFLCFSAMLKNI-EKEFGHFITQIEWISLGGGIHFTD----------------------- 206 + + Q I +GGG+ Sbjct: 224 DTRVAALAEVLPLLERARSRGLQPTMIDIGGGLPIQYLSASRYQAYLAEQNEADYRHGQV 283 Query: 207 --KDYPVKDFC----------------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 YP + +++ + + +EPG ++ + V Sbjct: 284 PTSFYPYGGERSAADYLEAFLSASIGQHCVANILKQHGLILAIEPGRSLADQSAITVFRV 343 Query: 249 LDISENIKNLVIVD------------SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 +V + E + ++ P G A + G S Sbjct: 344 TRTRRQPDGNHVVFVEGSSFSACETWFNSEFLIDPLHVFSVKKDTRPTPGK--AWIAGHS 401 Query: 297 CLAGDIFGEFH--FEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKNVDGTIKA 353 CL D+ F+ + GD + + + AGY ++ F+ +P + Sbjct: 402 CLDDDVITNRLIHFQTVPQPGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGEL 461 Query: 354 I 354 I Sbjct: 462 I 462 >gi|23379713|gb|AAM76599.1| ornithine decarboxylase 1 [Pan troglodytes] Length = 200 Score = 89.8 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 60/198 (30%), Gaps = 6/198 (3%) Query: 10 DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68 D +L +++ V A+KC + + TL G +S E+ L Sbjct: 2 DLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQLVQSL 59 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 E Y K +N + S++ K K+ LRI S Sbjct: 60 GVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSK 119 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186 + L+ R ++ + +V G+ FH F + + F Sbjct: 120 AVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDM 179 Query: 187 -GHFITQIEWISLGGGIH 203 + + +GGG Sbjct: 180 GAEVGFSMYLLDIGGGFP 197 >gi|325929653|gb|ADZ45335.1| pyridoxal-dependent decarboxylase [Streptomyces sp. NRRL 30471] Length = 388 Score = 89.8 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 116/344 (33%), Gaps = 26/344 (7%) Query: 3 KTPYYLIDKQKLLNNLDTAL---YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 +TP + D + + + G +LL ++K + + L G SS Sbjct: 33 ETPTIVHDPDGIDAEITAIRHGLSLLHVPGSRLLFSVKANRSRAVLTHLASRNIGAAVSS 92 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E E +A + ++ + + + +++ QL A H + G Sbjct: 93 VAEDRAAAEAGMSPRYATSPGLSGADLIELHKSGTHLDIDSIDQLA-----AVPRHSETG 147 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK---------IESEIKNVNGLMFHNNCENK 170 LR++ + P SR G + +D ++ V L H + Sbjct: 148 LRLSVPIPRESTARDMPW---SRFGIRWEDAGERGKAQAVLKERKLRVVRLHAHV-RDIG 203 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGG----IHFTDKDYPVKDFCQRLKEFSEKYS 226 + + + + +++ +++GGG H + C + Sbjct: 204 GVEDVRPLGRALAH-AARDLPEVDEVNIGGGMIRLFHHNQEAIAPVFECLAEELARAGRP 262 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 +++ EPG +VT+ L T VL + + + + ++ + + + T Sbjct: 263 LRVLAEPGAQLVTSHGYLITRVLSVRRHEGRQSVTVDASAWNLAGWSRFHLAMTGADRGE 322 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 +T + G +C D++ ++ GD + Y + Sbjct: 323 RWTTDLTGPTCYEKDLWFAGMATDRIEPGDLVVLRGAGAYVGSM 366 >gi|324504368|gb|ADY41886.1| Ornithine decarboxylase [Ascaris suum] Length = 510 Score = 89.8 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 57/396 (14%), Positives = 114/396 (28%), Gaps = 53/396 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63 P+Y++D +L N L+ V+ +L+C A + L + D G ++ E+ Sbjct: 69 PFYVMDMGRLENLLNAWREHMPR--VQPFYSLRCNADPVLLRLLVEQPDVGFCCTNRVEL 126 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E G E Y + S+ + + A + LR+ Sbjct: 127 NMAVELAGRERVLYANPLWTRGSVRHAREMGIELLLFESREDLLRMHAAYPEASLVLRVC 186 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + S+ + E V G+ F S ++ + Sbjct: 187 MNAPVSEGSMRVGCELMGEAPELLSMAA-DLGVKVVGISFSIGAGACSLGIYAYAIAQAC 245 Query: 184 KEF---GHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKY-------SVQIYL 231 + F + + +GGG + ++Y V+I Sbjct: 246 RLFGVAASLGHDLCVLDIGGGFPCGSPTRGPSFSQVAATISASLDEYFPESSFGHVRIIA 305 Query: 232 EPGEAIVTNTTTLNTTVLDIS------------------ENIKNLVIVDSSVEAHVPDYL 273 EPG + +L T ++D + S + + Sbjct: 306 EPGRYFAASVFSLITNIIDKRAVDASVVTNDVFDSGTAGFVYQTNEGFFGSFGCRLTAFC 365 Query: 274 LYQESATIYPNT----GPYTA-MVCGRSCLAG-DIFGEFHFEKPVKIGDRISFEDVAGYN 327 + + YT + G + DI ++IG+ + ++D+ Y+ Sbjct: 366 EPKCRPLVECVHDVSADNYTYATILGPTLSNNVDIVQPVARLPQMQIGEWLLWDDMGAYS 425 Query: 328 INRKNWFN-------GINMPTI-AVKNVDGTIKAIR 355 + N G PTI + + R Sbjct: 426 MG-----NRETLGEDGQPSPTIYYFVDDERWQHMSR 456 >gi|218659898|ref|ZP_03515828.1| diaminopimelate decarboxylase protein [Rhizobium etli IE4771] Length = 156 Score = 89.4 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 40/151 (26%), Gaps = 12/151 (7%) Query: 32 LLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDC--EIDA 88 + A+K + + TL + G S E+ ++ K A Sbjct: 5 VCYAMKANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEMDFA 64 Query: 89 VLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEK 146 + + + +L +A + RINP V + ++ G Sbjct: 65 LEAGIYCFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGIS 124 Query: 147 CKDKIESEIKN-------VNGLMFHNNCENK 170 + V G+ H + Sbjct: 125 WERARAIYAHAAKLPGIEVTGIDMHIGSQIT 155 >gi|312082719|ref|XP_003143560.1| pyridoxal-dependent decarboxylase [Loa loa] gi|307761276|gb|EFO20510.1| pyridoxal-dependent decarboxylase [Loa loa] Length = 480 Score = 89.4 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 97/356 (27%), Gaps = 35/356 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL-NQYMDGTTSSSLYEV 63 P+++++ + + + L+ +K VK AL+C + L G S+ YEV Sbjct: 57 PFFVMNVELVDDILENW--FKKMPDVKPYYALRCNPDNILLKLLTRNTDMGLCCSNRYEV 114 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + Y C ++ + + I LR+ Sbjct: 115 EMAMKIVNVDRIIYGNPLWTRGSIRHAKECGIQTVIIETEDDLKRFTTYYPEVSIILRVT 174 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + N I+ + G+ + + + Sbjct: 175 MDRKLVSDPFTEDNF-DVEKAVSLLRTIKDSSVKIKGVSLSVRSICTTPTMYLYAIAQCR 233 Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC---------QRLKEFSEKYSVQIYL 231 + F +++ + +G G + ++I Sbjct: 234 RLFDTGLEVGHKMDVLDVGDGFPSMSATDGISFDQIAKSLQVALALFFPSKLFKDIKIIA 293 Query: 232 EPGEAIVTNTTTLNTTVLD------------------ISENIKNLVIVDSSVEAHVPDYL 273 EPG +T +L T V+D + + + + Sbjct: 294 EPGPYFAASTFSLITRVIDKRLIDGSFLTNDESDAGTVGYVYQINEGFYGAFGCKLSTRR 353 Query: 274 LYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 S + T + G DI P+++GD + + D+ Y I Sbjct: 354 NPICSPLMIFGEKMNTYAAIIGPEPCDTDIVLPLTRLPPLQVGDWLIWHDMGAYTI 409 >gi|23379717|gb|AAM76601.1| ornithine decarboxylase 1 [Pongo pygmaeus] Length = 200 Score = 89.0 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 59/198 (29%), Gaps = 6/198 (3%) Query: 10 DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68 D +L ++ V A+KC + + TL G +S E+ L Sbjct: 2 DLGDILK--KHLRWLXAVPRVTPFYAVKCNDSKAIVKTLAAVGTGFDCASKTEIQLVQSL 59 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 E Y K +N + S++ K K+ LRI S Sbjct: 60 GVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSK 119 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186 + L+ R ++ + +V G+ FH F + + F Sbjct: 120 AVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDM 179 Query: 187 -GHFITQIEWISLGGGIH 203 + + +GGG Sbjct: 180 GAEVGFSMYLLDIGGGFP 197 >gi|227329050|ref|ZP_03833074.1| putative lysine/ornithine decarboxylase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 467 Score = 88.7 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 55/421 (13%), Positives = 113/421 (26%), Gaps = 78/421 (18%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ + NN+ + ++ +L K + G+ G SSL Sbjct: 51 GSPLNIVWPHTVANNIAALRTVLQHHDVDCRLYYGAKVNKSPGLVQAAVNAGVGVDVSSL 110 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ G A A + ++ + I+ ++ + ++ A+ L Sbjct: 111 QELKDALRAGCDGARLCATGPAKTREFLTELVHHRALIVLDSPEEFDEVLALAELLRATE 170 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENK 170 +R+ SR G + ++ G FH Sbjct: 171 PVRVLLR-------YRPSFAQNSRFGMLADEVAICLETLSTRQDALHLEGFHFHLGGYEP 223 Query: 171 SFLCFSAMLKNI-EKEFGHFITQIEWISLGGGIHFTD----------------------- 206 + + + I +GGG+ Sbjct: 224 DTRVAALAEVLPLLERARSKGLEPAIIDIGGGLPIQYLSASRYQEYLAKQNEADYRHGQV 283 Query: 207 --KDYPVKDFC----------------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 YP R+ + + Y + + +EPG ++ + V Sbjct: 284 PTSFYPYGGERSAADYLDAFLSASIGQNRVADVLKHYGLILAIEPGRSLADQSAITVFRV 343 Query: 249 LDISENIKNLVIVD------------SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 +V + E + ++ P G A + G S Sbjct: 344 TRTRRQPDGNHVVFVEGSSFSACETWFNSEFLIDPLHVFSVKKDTRPTPGK--AWIAGHS 401 Query: 297 CLAGDIFGEFH--FEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKNVDGTIKA 353 CL D+ F + GD + + + AGY ++ F+ +P + Sbjct: 402 CLDDDVITNRLIHFRTVPQPGDLLIYVNTAGYQMDLLENAFHRHPLPARLCAFKGKKGEL 461 Query: 354 I 354 I Sbjct: 462 I 462 >gi|21780334|gb|AAM77684.1|AF521192_1 ornithine decarboxylase [Capsicum annuum] Length = 335 Score = 88.7 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 81/266 (30%), Gaps = 12/266 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ +D V+ A+KC L +S E+ Sbjct: 54 PFYVLDLGEVVSLMDQWNVAL--PNVRPFYAVKCNPEPSFLSMLAAMGSNFDCASRAEIE 111 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + K A + +++ ++ K K + + ++ Sbjct: 112 YVLSLGISPERIVFANPRKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPRCELLLRIK 171 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE---NKSFLCFSAM 178 + + + E ++ V+G+ FH + ++L A Sbjct: 172 PMNDGNARCPMGPKY-GALPKEIEPLLRIAQASRLTVSGVSFHIGSGDADSNAYLGAIAA 230 Query: 179 LKNIEKEFGHFIT-QIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 K + K F ++ + +G G + FS + + I EPG Sbjct: 231 AKQVFKTAAKFGMSKVNVLDVGDGFTSGHQFTTAATAVKSALQQHFSNEPELTIIAEPGR 290 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV 261 TL TT++ Sbjct: 291 FFAETAFTLATTIIGKRVRGDLREYW 316 >gi|23379719|gb|AAM76602.1| ornithine decarboxylase 1 [Macaca sp.] Length = 200 Score = 88.7 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 60/198 (30%), Gaps = 6/198 (3%) Query: 10 DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68 D +L +++ V A+KC + + TL G +S E+ L Sbjct: 2 DLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAVGTGFDCASKTEIQLVQNL 59 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 E Y K +N + S++ K K+ LRI S Sbjct: 60 GVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVTRAHPKAKLVLRIATDDSK 119 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186 + L+ R ++ + +V G+ FH F + + F Sbjct: 120 AVCRLSVKFGATLRNSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDM 179 Query: 187 -GHFITQIEWISLGGGIH 203 + + +GGG Sbjct: 180 GAEVGFSMYLLDIGGGFP 197 >gi|308233662|ref|ZP_07664399.1| diaminopimelate decarboxylase [Atopobium vaginae DSM 15829] gi|328943708|ref|ZP_08241173.1| hypothetical protein HMPREF0091_10398 [Atopobium vaginae DSM 15829] gi|327491677|gb|EGF23451.1| hypothetical protein HMPREF0091_10398 [Atopobium vaginae DSM 15829] Length = 443 Score = 88.3 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 55/419 (13%), Positives = 113/419 (26%), Gaps = 69/419 (16%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y++D+Q L+ I + + L ++K S E+ Sbjct: 15 TPTYVLDEQAFKQRLEHVKKIMGTS-IDLCYSIKANPFLS--KAAQACGFKLEVCSPGEL 71 Query: 64 MLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + Y+ K D A+ +V Q + +A KL K+ L Sbjct: 72 EICKRLHVDPKAIVYSGVCKQTDDIQAALRYGVGVCTAESVLQALLIEREAAKLDKQGLL 131 Query: 121 RINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 +P + L ++ + G+ + + K L Sbjct: 132 SKSPVRVLLRLNAGSQFGMCQDDLEHLINNRAHFMHCSFVGIHYFVGTQRKKLTHQEKEL 191 Query: 180 KNIEKEFG----HFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK--YSVQI 229 +E + + + + G G+ + + L ++ V + Sbjct: 192 VRLEALIDELESKYNWKCQRLEYGPGLAYPYFIDQDASDTLLPAKELAPALQRIANRVPL 251 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ----ESATIYPNT 285 +E G + T T ++DI L Q + +I + Sbjct: 252 TVEMGRFFASECGTYLTRIVDIKHGQDTKTNYAFIDGGINHVSYLGQMMGLKCPSIINVS 311 Query: 286 GPYTAMVCGRSCL----------------------------------------------A 299 + +C Sbjct: 312 QQQATCLDVSTCEDEAQQKLALSTQAQSKLEEPQPFAQADESEGGRYTSSWTLCGSLCTT 371 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIREF 357 D+ + + + D ++F+ + Y+I F +MP I V+ G + R+F Sbjct: 372 SDVLVREYE-SSLGLNDILAFQHIGAYSITEAMYLFLSRDMPRIVVRKAHGVYELARDF 429 >gi|213421572|ref|ZP_03354638.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 183 Score = 88.3 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 7/101 (6%) Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFHFEKPVKIGDRISFEDVA 324 D+ Y +A+ + G C GD F EF K +GD ++F D Sbjct: 79 DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAG 138 Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 Y I + +N + + + +G + IR SY D Sbjct: 139 AYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 179 >gi|23379721|gb|AAM76603.1| ornithine decarboxylase 1 [Saguinus oedipus] Length = 200 Score = 88.3 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 6/198 (3%) Query: 10 DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68 D +L +++ V A+KC + + +TL G +S E+ L Sbjct: 2 DLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVNTLAAIGTGFDCASKTEIQLVQSL 59 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 E Y K +N + S++ K K+ LRI S Sbjct: 60 GVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSK 119 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186 + L+ + ++ + +V G+ FH F + + F Sbjct: 120 AICRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAITDARCVFDM 179 Query: 187 -GHFITQIEWISLGGGIH 203 + + +GGG Sbjct: 180 GAEVGFSMYLLDIGGGFP 197 >gi|119175426|ref|XP_001239945.1| hypothetical protein CIMG_09566 [Coccidioides immitis RS] Length = 396 Score = 88.3 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 35/305 (11%) Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKKIGLRINPSVS 127 Y +K + + ++ + A + ++ LR+ Sbjct: 8 GVEPHRILYAAPFKSEDGILYAKEHG-VTQTMFDTEDELRKLADYFPNAELYLRLWADDP 66 Query: 128 YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF- 186 S+ L ++ + V GL FH F + + + + Sbjct: 67 SSRVRLGSKYGVQLPQAKELLVLAQELNMKVIGLCFHVGSSAADFDAYRQAIAFTREVYD 126 Query: 187 ------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEAIVT 239 I I +GGG + + ++++ ++ ++ + EPG Sbjct: 127 FNQSLREDQRHPIRTIDIGGGFSLGNFESAATAIRTSIRQYFGDEKHLRWFAEPGRYFAE 186 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSV-----EAHVPDYLLYQE----------------- 277 L VL + + + H+ D + + Sbjct: 187 EAFYLVCRVLGTRPRACLGNGIGADEKLPVGDIHINDGIYHNFLNALTEQVVPQPILLDC 246 Query: 278 --SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334 + + V G++C + D K+GD + F + Y + F Sbjct: 247 TGTPYVSAADNGDPYTVWGQTCDSFDKIATNCVLPRRAKVGDWLCFPFMGAYTHVTGSDF 306 Query: 335 NGINM 339 NG Sbjct: 307 NGFPK 311 >gi|148252222|ref|YP_001236807.1| putative ornithine/diaminopimelate PLP dependent decarboxylase [Bradyrhizobium sp. BTAi1] gi|146404395|gb|ABQ32901.1| Putative Ornithine/Diaminopimelate PLP Dependent decarboxylase [Bradyrhizobium sp. BTAi1] Length = 456 Score = 87.9 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 58/411 (14%), Positives = 120/411 (29%), Gaps = 60/411 (14%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P +LI ++L +N+ + + +++GV + K + + G SSL Sbjct: 40 GSPTHLIWPEELQSNIASLKCVLQDSGVAHAIYYGAKANKSPALLAAALGAGAGIDVSSL 99 Query: 61 YEVMLGHE-KFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 YE+ G A +++ I ++ +L+ ++ Sbjct: 100 YELREARRVGADGAQIVATGPAKTAAFHRELIAANALISVDSPEELDDLIGSLPSDEREP 159 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN-NCENKSFLCFSA 177 + + + P + + + ++GL FH + S Sbjct: 160 VCPVLLRLRPHSQAQSRFGMPAAAIRRCLARIADERRLRLDGLHFHLGGYDWPSRAQAID 219 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD------------------------ 213 + + E I +GGG+ D+ V Sbjct: 220 EVAGLIGECRARGFSPRMIDIGGGLPAQYVDHDVYQAHLAAQAPEDYRTREVPASFYPYG 279 Query: 214 ------------------FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + + ++ + + +EPG A+ + V + Sbjct: 280 GRLSAATWLRCLLRAPLADGRSIADYLTDEGLVLAMEPGRALADHAALSVFRVTRVKALA 339 Query: 256 KNLVI------VDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGE 305 + + S+ E L P A + G SCL D+ Sbjct: 340 CDAHVLFVEGSSFSACETWFRSEFLVDPILIPRDARPAGAPPIRAYLAGHSCLDDDVLSN 399 Query: 306 FH--FEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMPTIAVKNVDGTIKA 353 F + GD + + + AGY ++ +N F+ MP DG + Sbjct: 400 RWLTFPVAPQAGDLLVYANTAGYQMDLLENQFHRHPMPNRLCVAQDGKGQL 450 >gi|227505167|ref|ZP_03935216.1| possible decarboxylase [Corynebacterium striatum ATCC 6940] gi|227198240|gb|EEI78288.1| possible decarboxylase [Corynebacterium striatum ATCC 6940] Length = 470 Score = 87.9 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 50/384 (13%), Positives = 103/384 (26%), Gaps = 60/384 (15%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++D + L N + GV ++ A K A G +SL Sbjct: 53 GSPVNVLDPRPLARNAAELVDAGTALGVDTRVFFARKANKALAFVGAARAAGHGVDVASL 112 Query: 61 YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + + + + I ++ +L + Sbjct: 113 NELRQVLAVGVPPKDVILSAAIKDERLLRTAVKAGVVISCDSRDELARIAALGTPARIAP 172 Query: 119 GLRINPSVSYSK------------------------FILADPNRPFSRLG-------EKC 147 L +P+V L RL + Sbjct: 173 RLAPDPTVLPPTRFGERLDVWRSIDWPDTVEAVGVHVHLHGYAESDRRLALAEAITLVEA 232 Query: 148 KDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWIS--LGGGIHFT 205 ++ + IE++ W + L F Sbjct: 233 LRAAGHPASFIDIGGGVPMSYLLHETQWEQYRDRIERQRAGTGEPFTWKNDPLTNTYPFW 292 Query: 206 DKDYPVKDFCQRLKEF----------SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + F Q LK ++S+ ++LEPG +++ + V + E Sbjct: 293 QTPTRGEWFTQLLKGKVSGYGTAATALREHSIALHLEPGRSLLDGCGMILAEVSFLKERS 352 Query: 256 ---------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF 306 N ++ + + D L + + P T + G C+ ++ Sbjct: 353 DGLPLIGLAMNRTQCRTAADDLLLDPFLVPTAGEVER--APRTGFLVGAYCIEDEVILRR 410 Query: 307 H--FEKPVKIGDRISFEDVAGYNI 328 F + +GD ++ + AGY + Sbjct: 411 ALDFPDGIAVGDTLAIPNTAGYFM 434 >gi|47212507|emb|CAF93729.1| unnamed protein product [Tetraodon nigroviridis] Length = 444 Score = 87.9 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 43/364 (11%), Positives = 102/364 (28%), Gaps = 44/364 (12%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ ++ +++C ++ + D L G ++ E+ L Sbjct: 40 FFVADLGVVMRQHVRWRTHMAQ--IRPYYSVRCNSSPTVIDVLAALGTGFICTNKTELEL 97 Query: 66 G-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E ++ A + D ++ + +L K + + + Sbjct: 98 VQRRGVPPEDIIFSGVSKQLSQMKYAAKNGVDLLVCDNEVELCKISRCHPNAKYVLIVIL 157 Query: 123 NPSVSYS----KFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSF 172 + ++ N G KD V G+ FH + Sbjct: 158 TLVLMLLLQVATEAISPDNGMAMTFGCSLKDCRHLLERAKELGVQVVGVRFHIPGSCEDS 217 Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSV 227 + + + F ++ + +GGG + + + + + + S Sbjct: 218 QVYVHAVSDARCVFDMGEEIGFSMKILDIGGGFNGCETQLELVNNAVVSMVDLYFPPSSG 277 Query: 228 QIYL-EPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLY---------- 275 + EPG V++ TL V+ ++ + + Y Sbjct: 278 VCIIAEPGSFFVSSAFTLAVNVISKEMVARDSLDQAHDEPSPNDEPAFQYYMKEGVYGSF 337 Query: 276 ------------QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 N +++ + G S D E + IGD + F Sbjct: 338 ASKLCEDQIFVPSVHKNTCLNAAVFSSSLRGPSGDDMDQVVEHCLLPELDIGDWLIFSQA 397 Query: 324 AGYN 327 Y+ Sbjct: 398 GAYS 401 >gi|227112172|ref|ZP_03825828.1| putative lysine/ornithine decarboxylase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 467 Score = 87.9 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 52/414 (12%), Positives = 111/414 (26%), Gaps = 64/414 (15%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ + NN+ + + +L K + G+ G SSL Sbjct: 51 GSPLNIVWPHTVANNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNAGVGVDVSSL 110 Query: 61 YEVMLGH--EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ G A A + A++ + I+ ++ + ++ A L Sbjct: 111 QELKDALRAGGDGARLCATGPAKTREFLTALVHHRALIVLDSPEEFDEVLALADLLRVTD 170 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-IESEIKNVNGLMFHNNCENKSFLCFSA 177 +R+ S + + + + ++ G FH + Sbjct: 171 PVRVLLRYRPSFAQASRFGMLADEVAICLEALSTRQAVLHLEGFHFHLGGYEPDTRVAAF 230 Query: 178 MLKNI-EKEFGHFITQIEWISLGGGIHFTD-------------------------KDYPV 211 + Q I +GGG+ YP Sbjct: 231 AEVLPLLERARSKGLQPAIIDIGGGLPIQYLSASRYQDYLAKQNAADYRHGQVPTSFYPY 290 Query: 212 KDFCQRLKE----------------FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + +++ + + +EPG ++ + V Sbjct: 291 GGERSAVDYLEAFLSASIGQNRVADVLKQHGLILAIEPGRSLADQSAITVFRVTRTRRQP 350 Query: 256 KNLVIVD------------SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303 +V + E + ++ G A + G SCL D+ Sbjct: 351 DGNHVVFVEGSSFSACETWFNSEFLIDPLHVFSVKKDTPLVPGK--AWIAGHSCLDDDVI 408 Query: 304 GEFH--FEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKNVDGTIKAI 354 F + GD + + + AGY ++ F+ +P + I Sbjct: 409 TNRLIHFRTVPQSGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGELI 462 >gi|160420255|ref|NP_001087651.1| MGC81763 protein [Xenopus laevis] gi|51895808|gb|AAH81043.1| MGC81763 protein [Xenopus laevis] Length = 442 Score = 87.5 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 105/346 (30%), Gaps = 29/346 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ I +K ++C ++ + + L G ++ E+ L Sbjct: 40 FFVADLGKIVKKHFKWKNIMG--HIKPFYTVRCNSSPAVLEILAALGMGFACANKNEMSL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 ++ E Y K + + S+ K L+ K+ L + Sbjct: 98 VYDLGISMENVVYTNPCKQASQIKHAAKIGVNLMTCDSETELKKIARNHLNAKLLLHVAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN--NCENKSFLCFSAMLKNI 182 + ++ + D + V G+ FH + +++ + + + Sbjct: 158 EGMSGEEEMSMTFGTTLKNCRHLLDCAKELSVEVVGVKFHVSNSSNQQTYNHALSDARCV 217 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTN 240 ++ + +GG + + L F E +I EPG V++ Sbjct: 218 FDMAEELGFKMNILDIGGIPENEAQLEELYQAVGPLLDVYFPEGSGTRIIAEPGSFYVSS 277 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ----------------------ES 278 TL V+ + + + +Y Sbjct: 278 AFTLAVNVIAKETIEHDHHLSSAGKPISNKLAFVYCLNEGVYGSFARKLFEKLDTTPEVH 337 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 +T+ + G S D+ + +++GD I FE++ Sbjct: 338 KKYKDGEPLFTSSLLGASYDELDVIVDHCVLPELEVGDWIVFENMG 383 >gi|242001342|ref|XP_002435314.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215498644|gb|EEC08138.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 391 Score = 87.5 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 115/369 (31%), Gaps = 54/369 (14%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY---- 61 +++ D L + + + + + S Y Sbjct: 30 FFICDLNDLESKVKLWRREL----------------PRVTPFFGERLSLFCLSKRYRLSF 73 Query: 62 -------EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 E+ + E Y A + F++V +L K K Sbjct: 74 SFLFFQNELEAVLDIGVSPERILYASPVKCSSHLKFASERGVTLMAFDSVEELAKIK--- 130 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171 + ++ LR++ + ++ + E + + V G++FH + Sbjct: 131 -DENARLLLRVDVVDNTNEVSTLTKFGTSAHEVEGVLNLAFKMGRRVVGILFHVKSAHHD 189 Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGG-IHFTDKDYPVKDFCQRLKEFSEKYSV 227 F+ +K+ + F Q+ +S+GGG + T C+ ++ + + Sbjct: 190 PDTFTLAVKHAKTAFDIGTRLGFQMTVLSIGGGFLGGTRMQDSFLKVCEAIRSAIDIHFP 249 Query: 228 Q-----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV---------PDYL 273 I EPG+ +VT+ +L VL + + ++ + Sbjct: 250 PSEGLEIIAEPGQFLVTSAYSLVVKVLHKRKRSAKIGGERGCLQTGIEVGRLTKLCRPAF 309 Query: 274 LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333 Y + P V G SC GD + IG+ + +++ Y + R + Sbjct: 310 RYVQPPFDRPL--DVLTTVWGSSCHPGDCVIAGELLFDMSIGEWLLIDNMGAYAVARASG 367 Query: 334 FNGINMPTI 342 FNG P + Sbjct: 368 FNGHGFPPV 376 >gi|23379715|gb|AAM76600.1| ornithine decarboxylase 1 [Gorilla gorilla] Length = 200 Score = 87.5 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 59/198 (29%), Gaps = 6/198 (3%) Query: 10 DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68 D +L +++ V A+KC + + TL G +S E+ L Sbjct: 2 DLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQLVQSL 59 Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 Y K +N + S++ K K+ LRI S Sbjct: 60 GVPPVRIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSK 119 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186 + L+ R ++ + +V G+ FH F + + F Sbjct: 120 AVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDM 179 Query: 187 -GHFITQIEWISLGGGIH 203 + + +GGG Sbjct: 180 GAEVGFSMYLLDIGGGFP 197 >gi|325303748|tpg|DAA34383.1| TPA_inf: ornithine decarboxylase [Amblyomma variegatum] Length = 308 Score = 87.5 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 89/272 (32%), Gaps = 16/272 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++++D ++ + K V+ A+KC + + L G +S E+ Sbjct: 29 PFFVVDVGDIVYKVKLWK--LKIPRVEPFYAVKCNGDPAVLELLAGLGLGFDCASKAEID 86 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 Y K D + F+ +L+K + + LR Sbjct: 87 TVRAVGVASNRIIYANPCKTRSYIKHAAAVGVDLMTFDNELELHKVRGLYPAARLVLRLR 146 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 ++ + S L + S NV G+ FH ++ F+ +++ Sbjct: 147 VDDTGSVC--RLGVKFGCELADAQHLLSVARSLGLNVVGVSFHVGSNSREPQTFARAIED 204 Query: 182 IEKEFGH---FITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232 + F + + +GGG + F E+ V+I E Sbjct: 205 ARQVFDQGLAMGFPMTLLDIGGGYPGDRGFQKLFDQIAHTINSSLAEHFPEESGVRIISE 264 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSS 264 PG V++ TL TTV+ EN + + Sbjct: 265 PGRFFVSSAFTLYTTVIAKRENSGRPMYYLND 296 >gi|238927648|ref|ZP_04659408.1| conserved hypothetical protein [Selenomonas flueggei ATCC 43531] gi|238884573|gb|EEQ48211.1| conserved hypothetical protein [Selenomonas flueggei ATCC 43531] Length = 84 Score = 87.5 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 1/76 (1%) Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 + G C D F + IGD + D + +N ++ +DG+I Sbjct: 1 MTGSLCENNDKFAIDRALPKIDIGDILIIHDTGAHGSAMGFNYNAKLHCAELLRRMDGSI 60 Query: 352 KAIRE-FSYNDYYNNL 366 + IR + +DY+ L Sbjct: 61 ELIRRPQTIDDYFATL 76 >gi|87308556|ref|ZP_01090696.1| probable diaminopimelate decarboxylase [Blastopirellula marina DSM 3645] gi|87288648|gb|EAQ80542.1| probable diaminopimelate decarboxylase [Blastopirellula marina DSM 3645] Length = 504 Score = 87.5 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 48/407 (11%), Positives = 110/407 (27%), Gaps = 82/407 (20%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ L NL + + ++ A K D G +SL Sbjct: 65 GSPLNILHASPLAKNLAAFNRVAADHQLDFQVFFARKANKCLSFVDEATASGAGIDVASL 124 Query: 61 YEVMLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ +H A ++ + A + + TI + +L + + Sbjct: 125 AELQQVVANGVRRSHIICTAAIKEEALLAACVQHGVTIAIDNGDELEQLASLLTNDSSQA 184 Query: 119 GLRINPSVSYSKFILADPN-----RPFSRLGEKCKDKIESEIKNVNGLMFHN--NCENKS 171 + + S F + + ++S +++G+ FH ++ Sbjct: 185 SIALRLSGFEHDGNRLHSRFGIDIGQFEDFVSRNRGALDSPALSIDGIHFHLDGYSASQR 244 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHF--------------------------- 204 S L I +++ +GGG+ Sbjct: 245 VSAISQCLGLI-DRLRELGHVPKFLDIGGGVPMSYLEDKSQWETFWEAHRESLLQRRDPI 303 Query: 205 ---------------------TDKDYPVKDFCQRLKEFS-------------EKYSVQIY 230 Y Q L+ + ++Q+ Sbjct: 304 TYRNHGLGFTAIEEKIYGSRNCYPYYQEGVQAQWLEMVLSGRCENKTIATAIRERNLQLR 363 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE-------SATIYP 283 EPG +++ V+ ++ + ++ + + Sbjct: 364 CEPGRSLLDGCGLTIARVVFRKQHPNGDWFIGLAMNRTQCRTSSDDFLVDPILIRSQVQN 423 Query: 284 NTGPYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNI 328 + G C+ ++ + F V+IGD ++F + AGY + Sbjct: 424 PAPAIEGYLVGAYCMESELLTLRKLRFPDGVEIGDLVAFPNTAGYLM 470 >gi|21780355|gb|AAM77691.1|AF522351_1 ornithine decarboxylase [Sorghum bicolor] Length = 339 Score = 87.1 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 75/267 (28%), Gaps = 14/267 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++++ +D V+ A+KC L +S E+ Sbjct: 58 PFYVLDLGEVVSLMDQWNVAL--PNVRPFYAVKCNPEPSFLSMLAAMGSNFDCASRAEIE 115 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E + K + T ++ + K L Sbjct: 116 YVLSLGISPERIVFANPCKPESDIIFAEKVG-VNLTTYDLEDEVYKIKKHHPKCELLLRI 174 Query: 124 PSVSYSKFILADPNRPFSRLGEKCK---DKIESEIKNVNGLMFHNNCE----NKSFLCFS 176 +S F E+ + ++ V+G+ FH + N + Sbjct: 175 KPMS-DGNARCPMGSKFGAFPEEIEPVFRIAQASRLTVSGVSFHIDSGDADSNAYLGAIA 233 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 A + E ++++ + + GG + FS + + I PG Sbjct: 234 AAKQVFETAAKFGMSKMNVLDIDGGFTSGHQFTTATTTVKSALQQHFSNEPELTIIAGPG 293 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV 261 TL TT++ Sbjct: 294 RFFAETAYTLATTIIGKRVRGDLREYW 320 >gi|327540825|gb|EGF27386.1| diaminopimelate decarboxylase [Rhodopirellula baltica WH47] Length = 506 Score = 87.1 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 55/406 (13%), Positives = 116/406 (28%), Gaps = 80/406 (19%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P L+ + + N++ + + G ++ A K G D + G ++S Sbjct: 68 GSPLNLVRPRTMRRNVEELNAVARERGLDFRVFFARKANKCLGFVDEAIESNFGVDTASE 127 Query: 61 YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ + D ID L I + +L D+A +L ++ Sbjct: 128 NELRQCLQQCVPAKDLICTAAIKSDSLIDLCLQQQVCIAVDNDDELQIIVDRANELGRRA 187 Query: 119 GLRIN-PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN------------ 165 + + + LA ++ S V G+ FH Sbjct: 188 RIALRLGGFRHEGVKLATRFGFDVDRDRDLPQRLTSLPVMVQGIHFHLDGYDAGQRVSAL 247 Query: 166 ---------------------------NCENKSFLCFSAMLKNIEK-------EFGHFIT 191 + ++ K + + Sbjct: 248 SVAMEWVERLRAVGQPVEFIDMGGGFPMSYLEEHRQWATFWKEHRRALLGERDTLTYHGH 307 Query: 192 QIEWISLGG---GIHFTDKDY-------------PVKDFCQRLKEFSEKYSVQIYLEPGE 235 + GG G + + + + + +VQ+ EPG Sbjct: 308 GLGLAVEGGRVVGQPKMYPFFQRPVRGNWLAGVLDSRIEGKAIANRLLELNVQLRCEPGR 367 Query: 236 AIVTNTTTLNTTVLDISENIKNLV---------IVDSSVEAHVPDYLLYQESAT--IYPN 284 +I+ V +N + +S + + D +L + + Sbjct: 368 SILDGCGLTVARVEFRKQNAEGDWLIGLSMNRTQCRTSSDDFLVDPILVPKQSCFDRATE 427 Query: 285 TGPYTAMVCGRSCLAGDIFG--EFHFEKPVKIGDRISFEDVAGYNI 328 T P + + G C ++ + F V+ GD I+F + AGY + Sbjct: 428 TKPMSGYLVGAYCTESELISLRKMQFPSGVQRGDLIAFPNTAGYFM 473 >gi|149178621|ref|ZP_01857207.1| probable diaminopimelate decarboxylase [Planctomyces maris DSM 8797] gi|148842547|gb|EDL56924.1| probable diaminopimelate decarboxylase [Planctomyces maris DSM 8797] Length = 501 Score = 86.7 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 59/441 (13%), Positives = 124/441 (28%), Gaps = 103/441 (23%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P +++ Q N + + G++ + A K +T G ++S+ Sbjct: 56 GSPLNVLNTQPFERNAKALYDVAEAQGLEFDVYFARKANKCLAFVETAKNQGYGVDTASI 115 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + + E A + + + + TI + + +L + A++L ++ Sbjct: 116 QELQQVLDNQVPPEKIICTAAVKSEALLRLCIKSGVTIAVDHLDELMQIVILAEQLKQRA 175 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------------SEIKNVNGLMFHNN 166 + + S R SR G + + N+ G+ FH + Sbjct: 176 DIAVRLSG-----FQHQGARLLSRFGFDLDEIRPLIEDLQNASPHCLQYLNLIGVHFHLD 230 Query: 167 CENKSFLCFSAMLKNI-EKEFGHFITQIEWISLGGGIHF--------------------- 204 ++ + E + ++ +GGG Sbjct: 231 GYCQAQRVSAIQQLLPLIDELRSRDFPVRFLDIGGGFPMSYLESETEWDTFWQTHRRALL 290 Query: 205 ---------------------------TDKDYPVKDFCQRLK-------------EFSEK 224 Y L+ + K Sbjct: 291 GEHRPLTYRNHGLGLTLVEGTLIGKPNCYPYYQSPVQANWLEGILTSECEAGTIADSLRK 350 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV---------IVDSSVEAHVPDYLLY 275 +Q+ EPG +++ V + +S + + D LL Sbjct: 351 RQIQLRCEPGRSLLDGCGFTAARVEFRKQQPTGDWLIGLSMNRTQCRTSSDDFLVDPLLI 410 Query: 276 QESATIYPNTGP--YTAMVCGRSCLAGDIFG--EFHFEKPVKIGDRISFEDVAGYNI--- 328 + P + + G C ++ + F V IGD I F + AGY + Sbjct: 411 PATEESLLPRTPAGISGYLVGAYCTESELLCLRKLQFPHGVGIGDLIVFPNTAGYFMHFL 470 Query: 329 -NRKNWFNGINMPTIAVKNVD 348 +R + F + V + D Sbjct: 471 ESRSHQF---PLAQNVVYDND 488 >gi|114621182|ref|XP_001154571.1| PREDICTED: ornithine decarboxylase antizyme inhibitor isoform 1 [Pan troglodytes] Length = 390 Score = 86.7 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 93/343 (27%), Gaps = 33/343 (9%) Query: 38 CFAAWGMFDTLNQYMDGTT--SSS--LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSN 92 + G+ D + L E+ L E E Y K + Sbjct: 8 ANYSVGLLDEGTNLGNVIDNYVYEHTLNEMALVQELGVPPENIIYISPCKQVSQIKYAAK 67 Query: 93 CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 I +++ K + K+ L I + + + + Sbjct: 68 VGVNILTCDNEIELKKIARNHPNAKVLLHIATEDNIGGEEGNMKFGTTLKNCRHLLECAK 127 Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGI-HFTDKD 208 + G+ FH + K + L + F G + + +GGG + Sbjct: 128 ELDVQIIGVKFHVSSACKESQVYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQL 187 Query: 209 YPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE 266 V L F E V+I EPG V++ TL ++ + Sbjct: 188 EEVNHVISPLLDIYFPEGSGVKIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKT 247 Query: 267 AHVPDYLLYQE----------------------SATIYPNTGPYTAMVCGRSCLAGDIFG 304 +Y + +T+ + G SC D Sbjct: 248 GSDEPAFMYYMNDGVYGSFASKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIV 307 Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 E + +GD + F+++ + + + FN P I Sbjct: 308 ESCLLPELNVGDWLIFDNMGADSFHEPSAFNDFQRPAIYYMMS 350 >gi|210613889|ref|ZP_03289953.1| hypothetical protein CLONEX_02166 [Clostridium nexile DSM 1787] gi|210150914|gb|EEA81922.1| hypothetical protein CLONEX_02166 [Clostridium nexile DSM 1787] Length = 74 Score = 86.7 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 42/69 (60%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 + TP Y+I +++L NL+ + G K+LLA K F+ + ++ + QY+ GTT+S LY Sbjct: 6 LPTPCYVIQEEQLRQNLEILKGVMDRTGCKILLAQKAFSMYEVYPLIAQYLSGTTASGLY 65 Query: 62 EVMLGHEKF 70 E LG E+ Sbjct: 66 EARLGAEEM 74 >gi|296207399|ref|XP_002750716.1| PREDICTED: arginine decarboxylase [Callithrix jacchus] Length = 447 Score = 86.3 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 16/294 (5%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ +KC ++ G+ L Q G + ++ E+ L Sbjct: 41 FFVADLGAIVR--KHFYFLKCLPRVRPFYVVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 H Y K + + + +++ K K+ L I Sbjct: 99 VQHIGIPASKIIYANPCKQIAQIKYAAKRGIQLLSFDNEMELAKVVKSHPSAKMVLCIAN 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S+S L+ + + + V G+ FH ++ + + Sbjct: 159 DDSHSLNRLSLKFGVPLKSCRHLLESAKKSHVEVVGVSFHVGSGCPDPQAYAQSIADARL 218 Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235 F ++ + LGGG T+ + + F E V I E G Sbjct: 219 VFEMGTELGHRMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDILAELGR 278 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 VT+ + ++ E + + + S Y I P Sbjct: 279 YYVTSAFAVAVSITAKKEVLLDQPGREGSPLL----CQSYYHPPHIATCAAPDP 328 >gi|294813528|ref|ZP_06772171.1| Putative amino acid decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294326127|gb|EFG07770.1| Putative amino acid decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 455 Score = 86.3 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 59/419 (14%), Positives = 121/419 (28%), Gaps = 67/419 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P++++ NL + AGV ++ A K A + + G +S E Sbjct: 37 PFHVLLPDAFDTNLAALRAVLTEAGVDGQVYFAKKANKAAVWVERCAEGGAGVDVASTGE 96 Query: 63 VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + G + + + + I + + +L+ A + Sbjct: 97 LREALGHGVRGEDLVVTGPVKSTELLRLAVRHGALIAVDALDELDTVVMTALNGRSRPA- 155 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD-KIESEIKNVNGLMFHN-NCENKSFLCFSAM 178 R+ + + LG + + + G FH + + +A Sbjct: 156 RVLLRALPTGQPHSRFGLTGDELGLALQRSARAGKALRMEGFSFHLSGYDLTARAELAAR 215 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTD---------------------------KDYPV 211 L + ++ + IS+GGG+ + YP Sbjct: 216 LVRLCRQARALGLTADRISIGGGLPISYTDAESWRAFLAAQHSGHYHAGKSFTEADFYPY 275 Query: 212 KDFC------------------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 Q L E + LEPG A++ + + E Sbjct: 276 HSPVSGAGALRALLAARPDGQQQTLAELLRDSDTALLLEPGRALLDRAGATVFAIQGVKE 335 Query: 254 NIKNLVIVDSSVEAHVPD---YLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIFGE 305 L++ + + Y + G + A V +CL D+ Sbjct: 336 RDGYLLLTVDGTSLSLSEQWFASEYLPDPWLLSPDGGAAPGLHRAAVGAATCLESDLVSW 395 Query: 306 FH--FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDG----TIKAIREF 357 F + + GD + + + AGY ++ + F+ + +P V + + R F Sbjct: 396 RKIGFLQRPRAGDLLVYPNTAGYQMDSNESSFHDLPLPPKVVVDRTERPRPRWRLDRHF 454 >gi|254390038|ref|ZP_05005259.1| amino acid decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|326442065|ref|ZP_08216799.1| amino acid decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|197703746|gb|EDY49558.1| amino acid decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 457 Score = 86.3 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 59/419 (14%), Positives = 121/419 (28%), Gaps = 67/419 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P++++ NL + AGV ++ A K A + + G +S E Sbjct: 39 PFHVLLPDAFDTNLAALRAVLTEAGVDGQVYFAKKANKAAVWVERCAEGGAGVDVASTGE 98 Query: 63 VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + G + + + + I + + +L+ A + Sbjct: 99 LREALGHGVRGEDLVVTGPVKSTELLRLAVRHGALIAVDALDELDTVVMTALNGRSRPA- 157 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD-KIESEIKNVNGLMFHN-NCENKSFLCFSAM 178 R+ + + LG + + + G FH + + +A Sbjct: 158 RVLLRALPTGQPHSRFGLTGDELGLALQRSARAGKALRMEGFSFHLSGYDLTARAELAAR 217 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTD---------------------------KDYPV 211 L + ++ + IS+GGG+ + YP Sbjct: 218 LVRLCRQARALGLTADRISIGGGLPISYTDAESWRAFLAAQHSGHYHAGKSFTEADFYPY 277 Query: 212 KDFC------------------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 Q L E + LEPG A++ + + E Sbjct: 278 HSPVSGAGALRALLAARPDGQQQTLAELLRDSDTALLLEPGRALLDRAGATVFAIQGVKE 337 Query: 254 NIKNLVIVDSSVEAHVPD---YLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIFGE 305 L++ + + Y + G + A V +CL D+ Sbjct: 338 RDGYLLLTVDGTSLSLSEQWFASEYLPDPWLLSPDGGAAPGLHRAAVGAATCLESDLVSW 397 Query: 306 FH--FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDG----TIKAIREF 357 F + + GD + + + AGY ++ + F+ + +P V + + R F Sbjct: 398 RKIGFLQRPRAGDLLVYPNTAGYQMDSNESSFHDLPLPPKVVVDRTERPRPRWRLDRHF 456 >gi|213423763|ref|ZP_03356743.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 257 Score = 86.0 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 28/215 (13%), Positives = 57/215 (26%), Gaps = 20/215 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + + +E IS GGG+ Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYH 233 >gi|213646737|ref|ZP_03376790.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 259 Score = 86.0 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 28/215 (13%), Positives = 57/215 (26%), Gaps = 20/215 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + ++ Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172 LR+NP + + S+ G D + + G+ H Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + + +E IS GGG+ Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYH 233 >gi|165975419|ref|YP_001649251.1| MccE [Escherichia coli] gi|158347574|gb|ABW37145.1| MccE [Escherichia coli] Length = 589 Score = 86.0 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 38/376 (10%), Positives = 94/376 (25%), Gaps = 26/376 (6%) Query: 6 YYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 + + D L L+ K+ + + K ++ S+ E+ Sbjct: 29 FVIFDVDGALERLEHYRCQLKSFFPNSSIAYSYKSNNLAQWCQIISGKGLYAEVCSVDEM 88 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L K E+ + I + + + + + + + + Sbjct: 89 NLAKRDGFNRIVFDGPLKKTSELLKAIEIGALIEVDNIDECKRLNELCKLHKLTCRIHLR 148 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S Y + + +SE ++G H + + Sbjct: 149 LSHYYDDNLSRFGLSESEAINLLEMLISKSEYLILDGFHLHVGSNLPNAEKICKAVIQYH 208 Query: 184 KEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQRLKEFSEKYS------VQIY 230 + ++ ++LG GI + + F + + + Sbjct: 209 ELILRYMPDDGTLNLGSGIPADSFSASSDNPTPCPEVFFSSIYDTIKNCFGTVCDKWNYI 268 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ------ESATIYPN 284 EPG +V + V+ V + +P + + + Sbjct: 269 FEPGRHLVEDFGYFIGKVISTKNRYGVKVAQTNIGINWIPSIRNWDHSFTLFHNHNHISD 328 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS-FEDVAGYNINRKNWFNGINMPTIA 343 ++ G +C D + D + Y++ N + N+ + Sbjct: 329 DKSDEYIIAGFNCFECDCLFPSVILPS-NLSDYLFSVRGCGAYDMQTGNQW-TRNLYAVY 386 Query: 344 VKNVD--GTIKAIREF 357 D + R Sbjct: 387 TITNDVVNISRIHRRE 402 >gi|126669235|ref|ZP_01740145.1| putative diaminopimelate decarboxylase protein [Marinobacter sp. ELB17] gi|126626303|gb|EAZ96987.1| putative diaminopimelate decarboxylase protein [Marinobacter sp. ELB17] Length = 244 Score = 86.0 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 68/211 (32%), Gaps = 16/211 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 Y+ D L +++ + ++ A K + + TL ++ G +S E+ Sbjct: 35 AYIYDLDSLSSHVQAVVEALP-PQCEMFYATKANPSLPLLQTLTPWVHGLEVASGGELRW 93 Query: 66 GHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLR 121 + F + K AV SN + I ++ +L + + + ++I LR Sbjct: 94 VRDHFPELPVIFGGPGKLVSELKHAVESNVELIHVESLLELERLTEITGKSQQTQEILLR 153 Query: 122 INPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSFLC 174 IN ++ + G + + G FH Sbjct: 154 INLNLPEMATTRLTMGGVPTPFGMDEDTLQQALPMLARASHVRLRGFHFHLMSHQLDPDR 213 Query: 175 F----SAMLKNIEKEFGHFITQIEWISLGGG 201 + + + + QI I++GGG Sbjct: 214 HLALIQTYCRRVSQWESDYDLQITQINVGGG 244 >gi|113205426|gb|AAU90343.2| Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein [Solanum demissum] Length = 262 Score = 86.0 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 80/241 (33%), Gaps = 15/241 (6%) Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCEN 169 H + L + L + F L E+ + + V G+ FH Sbjct: 9 WHPQCRLLLRIKAPSDSGSLRPLGKKFGALPEEIESLLHYACNVAGLKVVGVSFHVGSIA 68 Query: 170 KSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFC-QRLKEFSEK 224 + + + N F I +++ +++GGG T + + +++F Sbjct: 69 QDPTIYREAIANARAVFDVADYLGIPKMQILNIGGGFRSTPLFEEIASVVNEAVQDFFPD 128 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 +++I EPG TL T V+ K +D + L I Sbjct: 129 PNLKIIAEPGRFFPETAFTLVTHVIGKRVRGEKIEYWIDEGIYGSFRPTLYNSCFVGIKT 188 Query: 284 NTGPYTAMVC-----GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 + + + G SC + D +++ D I F D+ Y+ FNG + Sbjct: 189 ISMKESCEIGESTIYGPSCDSLDAVAVDIKLPELELDDLIVFYDMGAYSKCAGTKFNGFD 248 Query: 339 M 339 M Sbjct: 249 M 249 >gi|294638406|ref|ZP_06716643.1| pyridoxal-dependent decarboxylase [Edwardsiella tarda ATCC 23685] gi|291088475|gb|EFE21036.1| pyridoxal-dependent decarboxylase [Edwardsiella tarda ATCC 23685] Length = 235 Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 54/202 (26%), Gaps = 18/202 (8%) Query: 143 LGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ----IEWISL 198 L + + + G FH S A++++ + G + Q IE ++L Sbjct: 13 LAAALRLIADCRWLRLRGFHFHLLSHQLSVDNHLALIQHCLTQVGQWCRQFQLSIEMVNL 72 Query: 199 GGGIHFTD-------KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 GGG ++ + S + E G I VLDI Sbjct: 73 GGGFGINYRDPSHHFDWDDFCQRLPAVRHACQATSWLLRFECGRYISAPCGYYVMEVLDI 132 Query: 252 SENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG------PYTAMVCGRSCLAGDIFG 304 N+ + H + + G+ C D+ Sbjct: 133 KRNLGEWFAIGHGGTHHFRTPVAQGHDHPFQVVRRETPAQIRDQRVTLVGQLCTPKDVLA 192 Query: 305 EFHFEKPVKIGDRISFEDVAGY 326 + GD + F Y Sbjct: 193 RRQPISALAPGDWLVFPLAGAY 214 >gi|298708522|emb|CBJ49155.1| diaminopimelate decarboxylase [Ectocarpus siliculosus] Length = 477 Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 50/407 (12%), Positives = 113/407 (27%), Gaps = 78/407 (19%) Query: 33 LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETH--AYNVAYKDCEIDAVL 90 +A+K + + G ++S E+ +G + A D E++ L Sbjct: 63 CVAVKSCPLSVVVQEAVRAGLGIEAASFVELYMGLALGCPAVLAAFDSPAKTDGELEMAL 122 Query: 91 SNCDTIIFNTVSQLNKFKDKAQKLHK----KIGLRINPSVSYSKFILADPNRPFSRLGEK 146 + I N++ +L++ ++ ++G+R+NP V + S+ Sbjct: 123 ARGVLINANSLVELDRIDAIIKRQGCATSARVGIRLNPLVGAGSIAELSVSTSTSKFAVP 182 Query: 147 C----KDKI---ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI-----E 194 + + + L H + S + + + + +++ Sbjct: 183 MTPANVQAVVDSFRKWPWLVALHTHVGSQGYSVEQLAEGIAVLCEIADVIDSKLGKGRVT 242 Query: 195 WISLGGGIHFTDKDY----PVKDFCQRLKEF----SEKYSVQIYLEPGEAIVTNTTTLNT 246 + +GGG+ ++ LK+ + E G A V + Sbjct: 243 LLDIGGGLPANYDSDEVSPTFHEYAAALKKAAPSLFHNTERIVVTEFGRAFVAKVAMTVS 302 Query: 247 TVLDI--------------------------------------SENIKNLVIVDSSVEAH 268 V + ++ + Sbjct: 303 KVEYVRSSDGSGAEGRAAGKATQQEEDPSNVVGSPGKVPESSLPVEDHQTLVTHIGADLF 362 Query: 269 VPD-YLLYQESATIYPNT--------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + Y + S + + V G C GD GD + Sbjct: 363 LRTSYCPGRYSHRLSMYSRNGAALGGSAIRTDVAGPLCFQGDYVARGASLPRASPGDLVV 422 Query: 320 FEDVAGYNINRKNWFNGINMPTI--AVKNVDGT--IKAIRE-FSYND 361 D ++ + P++ +N DGT ++ ++E S D Sbjct: 423 VHDTGANTLSLFSRHCSRRFPSVYGYARNADGTVCVRLVKEKESVQD 469 >gi|83646422|ref|YP_434857.1| diaminopimelate decarboxylase [Hahella chejuensis KCTC 2396] gi|83634465|gb|ABC30432.1| Diaminopimelate decarboxylase [Hahella chejuensis KCTC 2396] Length = 461 Score = 85.2 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 51/390 (13%), Positives = 112/390 (28%), Gaps = 51/390 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P +L+ Q NL + A ++ +L A+K L G SSL Sbjct: 47 GSPVHLMFPQIFEENLYRFRRVYAAADIRGDVLYAMKVNRCNSFLKALAVNGAGADVSSL 106 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKI 118 +E+ G+ + + A+K + + ++ ++ + + HK Sbjct: 107 FELQDALAAGVEGDACSLSGAFKSPDFVELGVKKGAVVAIDSAEEFEGLQALLLASHKGG 166 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE-NKSFLCFSA 177 RI + + + + + G+ H + A Sbjct: 167 KTRIKLRWNGDVGASRFGMNSETLRTLADTLQPFQDRLELEGVALHLGGYSIRQRAEALA 226 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIH----------------------------FTDKDY 209 + + + +++GGG + Sbjct: 227 VSIEMIRYIRELGFDARSVNIGGGFPTRYLSRSNWEAFQGYNGSHYYTDGHPPSDFYPYW 286 Query: 210 PVKDFCQRLKEFSEKYSVQ---------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260 + + L++ + +Y+EPG A+V V + + + Sbjct: 287 SPRVKEEALEDILAACGNRERLRQESVALYVEPGRALVDQAGMTLFRVKGVKRLGPDKHV 346 Query: 261 VDSSVEAHVPDYLLYQ------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP--V 312 + + + G A + G SCL D+ + Sbjct: 347 IVVDGFSFSACETWFHSEFLVDPIVIGAGQGGAGVAYIAGGSCLESDVLTKRWIPFKNLP 406 Query: 313 KIGDRISFEDVAGYNIN-RKNWFNGINMPT 341 + GD ++F + AGY ++ + F+ P Sbjct: 407 QAGDCLAFVNTAGYQMDLMETCFHRAPTPK 436 >gi|15858867|gb|AAL08051.1| ornithine decarboxylase-like protein variant 4 [Homo sapiens] Length = 374 Score = 85.2 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 83/267 (31%), Gaps = 24/267 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ +++ V+ A+KC ++ G+ L Q G + ++ E+ L Sbjct: 41 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 66 G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI------ 118 H K + + + +++ K K Sbjct: 99 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKFVQQRGT 158 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSF 172 I + + + + G K + + V G+ FH Sbjct: 159 ACLIRMVLCIATDDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDP 218 Query: 173 LCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSE 223 ++ + + F ++ + LGGG T+ + + F E Sbjct: 219 QAYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPE 278 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLD 250 V I+ E G VT+ T+ +++ Sbjct: 279 GCGVDIFAELGRYYVTSAFTVAVSIIA 305 >gi|326435712|gb|EGD81282.1| ornithine decarboxylase [Salpingoeca sp. ATCC 50818] Length = 648 Score = 84.8 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 82/300 (27%), Gaps = 13/300 (4%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++L D + T + ++ A+KC + + L G +S E+ Sbjct: 41 FFLTDLHDIWCKHRTWQAMLPR--IEPFYAIKCNSDPVILKALAALNLGFDCASAKEIQA 98 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + + K + ++ K ++ LR+ Sbjct: 99 MLDLGVAPDRIIFANPCKALSHLLYAKEKGVKLMTFDNENELLKCAEHFPSARLVLRVLA 158 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L + + NV G+ FH + F+ + Sbjct: 159 DDSKAVCRLGLKYGARPSCTLRLLQLARTLHLNVVGVSFHVGSGSTDASAFADAVYRARA 218 Query: 185 EFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC-------QRLKEFSEKYSVQIYLEPG 234 F + + +GGG T + + F V++ EPG Sbjct: 219 VFDQALSLGFRPTLLDVGGGFPGTTYTSAISFDAIASCLTRAVDECFPPSCGVRVIAEPG 278 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294 V + L +V+ + +++ + S+ + V G Sbjct: 279 RFYVASACCLAVSVIGKRTPHEVAGDHNNNNRRAIDTTGNGHGSSARCHDVPAAAPRVVG 338 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 25/61 (40%) Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 P T + G +C + D + +++GD + + D+ Y + FNG + Sbjct: 521 CDVQRAPPLTCSIWGPTCDSMDCIEKRASLPELEVGDWLFYPDMGAYTSCAASTFNGFDK 580 Query: 340 P 340 P Sbjct: 581 P 581 >gi|47196205|emb|CAF88057.1| unnamed protein product [Tetraodon nigroviridis] Length = 375 Score = 84.8 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 4/91 (4%) Query: 250 DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309 +++ + AH L + Y + + G +C D E Sbjct: 278 YVNDGVYGSFNCILYDHAHCMPTLHKKRKPD----EVRYPSSIWGPTCDGLDRIVELCSL 333 Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 +++GD + FE++ Y + + FNG P Sbjct: 334 PDLQVGDWLVFENMGAYTVAASSTFNGFQKP 364 >gi|317506808|ref|ZP_07964582.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC BAA-974] gi|316254882|gb|EFV14178.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC BAA-974] Length = 394 Score = 84.8 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 88/341 (25%), Gaps = 33/341 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 T +ID+ ++ + ++ + + + L S E Sbjct: 50 GTACDVIDEAEVRAHAKAYRAAL--PHGEIAYSGRALLTPAIAGWLADEGLSLDVGSPDE 107 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + + + + +V ++ A ++ + + + Sbjct: 108 LGAALRGGFPASRIIAGGAVKTREELAAALAARVGRISVDTFDELAWLASRVDRPQQILL 167 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 +S + A E + V GL H + A+L+ + Sbjct: 168 RVGLS-DELEQAFGFPLSGLAEEAWLRASRQKHLRVVGLHCHVSSG-THDQAQGALLEFL 225 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 ++ E I+LGGG+ V+ + + ++ +EPG+ +V Sbjct: 226 DRMRAAHGFVAEQINLGGGV-------SVETARALAEAAVPRPLPRLVVEPGQGVVGQAG 278 Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302 V+ S P + R LA D+ Sbjct: 279 VRLVRVIAKSVGAHGEPCAHVDG-----PLPTAGALPRSCPGADLDECRLVNRHSLAADV 333 Query: 303 -----------------FGEFHFEKPVKIGDRISFEDVAGY 326 + GD I+F V Y Sbjct: 334 PTRLLSRPRSEHHCPAETAVVALPADARAGDLIAFPGVGAY 374 >gi|46204395|ref|ZP_00050057.2| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 159 Score = 84.8 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 11/108 (10%), Positives = 25/108 (23%), Gaps = 4/108 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + ++ ++K + Q G +S E Sbjct: 36 GTPLFVYDAGTMRRTYRALREAVAGF-AEVDFSVKANPNPAVIRVFGQEGAGAEIASGAE 94 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKF 107 E + K + I ++ + Sbjct: 95 FDAALRAGVAAERILFAGPGKSAADLDRVIGGGIGEIHLENREEMARV 142 >gi|23012658|ref|ZP_00052688.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 326 Score = 84.8 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 60/227 (26%), Gaps = 21/227 (9%) Query: 143 LGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM----LKNIEKEFGHFITQIEWISL 198 + + + G FH N+ +A+ + G + I+L Sbjct: 91 IPDAIATLRDCRALRFEGFHFHTVSNNRDAAGHAALCAAEIDLARAWAGEHGLDLRVINL 150 Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI 255 GGG D + +RL + ++ E G + VLD+ + Sbjct: 151 GGGWGVDYADPAWRFDTERLASALRPLAGSGPRLQFECGRIVAAYHAAYLCEVLDLKRSH 210 Query: 256 KNLVIVDSSVEAHVP---DYLLYQESATIYPNTGPYTAM----------VCGRSCLAGDI 302 + H + + + + G C D+ Sbjct: 211 GRAFALLRGGTHHFRLPSSWAHDHPFHILPREEWDHPWPRPEIARMPVTLAGELCTPKDV 270 Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKNVD 348 +++GD + FE Y + + F P + Sbjct: 271 LARDVPVARLRVGDLVCFEMAGAYGWDISHHDFLCHAHPERIFLDQG 317 >gi|332830979|ref|XP_003311935.1| PREDICTED: antizyme inhibitor 1 [Pan troglodytes] gi|193787865|dbj|BAG53068.1| unnamed protein product [Homo sapiens] Length = 363 Score = 84.8 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 90/323 (27%), Gaps = 31/323 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC +A + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G + + +GGG + V L F E V+I EPG V Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLA 299 + +T+ + G SC Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDE 360 >gi|207110799|ref|ZP_03244961.1| diaminopimelate decarboxylase [Helicobacter pylori HPKX_438_CA4C1] Length = 82 Score = 84.8 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 23/68 (33%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 KTP+YL D K+ K + ALK + + L G S+ E Sbjct: 14 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 73 Query: 63 VMLGHEKF 70 + + Sbjct: 74 IYRALKAG 81 >gi|218514643|ref|ZP_03511483.1| probable ornithine decarboxylase protein [Rhizobium etli 8C-3] Length = 264 Score = 84.4 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 77/261 (29%), Gaps = 28/261 (10%) Query: 100 TVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN 159 + ++ K A + + + P + + + + Sbjct: 1 SHEEVEKISRAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQ 56 Query: 160 --GLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF 214 G+ FH + + + L + ++ F ++ +++GGG Sbjct: 57 SYGVSFHVGSQMTKVDAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAE 116 Query: 215 C------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV------- 261 Q L+ Q +EPG +V N + V+ IS+ N Sbjct: 117 AYGKSIYQALRTHFGNQIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIG 176 Query: 262 -DSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDR 317 + + + + Y + ++ G +C + D+ E + + IGD Sbjct: 177 KFGGLAETMDEAIRYPIRTEHDGDEM-EPCVIAGPTCDSADVLYEKNLYPLPISLSIGDE 235 Query: 318 ISFEDVAGYNINRKNW-FNGI 337 + E Y FNG Sbjct: 236 VLIEGTGAYTTTYSAVAFNGF 256 >gi|45269005|gb|AAS55915.1| ornithine decarboxylase [Sus scrofa] Length = 152 Score = 84.0 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 4/104 (3%) Query: 250 DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309 +++ + AHV L + Y++ + G +C D E Sbjct: 8 YVNDGVYGSFNCILYDHAHVQPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCRL 63 Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353 + +GD + FE++ Y + + FNG P I T + Sbjct: 64 PEMHVGDWMLFENMGAYTVAAASTFNGFQRPAIYYVMSGPTWQL 107 >gi|224535494|ref|ZP_03676033.1| hypothetical protein BACCELL_00357 [Bacteroides cellulosilyticus DSM 14838] gi|224522887|gb|EEF91992.1| hypothetical protein BACCELL_00357 [Bacteroides cellulosilyticus DSM 14838] Length = 92 Score = 84.0 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 2/71 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 ++TP+Y D + L + L K ++ A+K A + + + G S Sbjct: 13 LRTPFYYYDTKVLRDTLSCMRAEAAKYGNFEVHYAVKANANPKVLTIIRENGLGADCVSG 72 Query: 61 YEVMLG-HEKF 70 EV F Sbjct: 73 GEVRAAIKAGF 83 >gi|119612258|gb|EAW91852.1| antizyme inhibitor 1, isoform CRA_b [Homo sapiens] Length = 346 Score = 84.0 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 82/277 (29%), Gaps = 9/277 (3%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC +A + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G + + +GGG + V L F E V+I EPG V Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMY 314 >gi|298711197|emb|CBJ32419.1| conserved unknown protein [Ectocarpus siliculosus] Length = 224 Score = 84.0 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 31/118 (26%), Gaps = 17/118 (14%) Query: 265 VEAHVPDYLLYQESATIY------PNTGPYTAMVCGRSCLAGDIF---------GEFHFE 309 + + L + +V G C +GD+ E Sbjct: 99 MTELLRPSLYGALHPIVVVPAEGEGGGEIAEYVVVGHCCESGDLLTPVSGAASEIERRTL 158 Query: 310 KPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAI-REFSYNDYYNN 365 +IGD + E Y +N + + G + + R + + N Sbjct: 159 AKAEIGDLVVVEGCGAYVAGMSAKNYNSFPEAPEVLLDSAGELHVVWRRQTLEQIFEN 216 >gi|12025046|gb|AAG45729.1|AF229440_2 y4yA [Sinorhizobium fredii] Length = 457 Score = 83.7 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 57/416 (13%), Positives = 109/416 (26%), Gaps = 68/416 (16%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P L+ L NL + + V+ + K + G+ G SSL Sbjct: 39 GSPLNLVWPDALQENLAALKGVLTDCRVEHAIYYGAKVNKSPGLMQAALSAGAGLDVSSL 98 Query: 61 YEVMLGH--EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 YE+ G A A ++ I + +L Sbjct: 99 YELRDARLLGAEGVRLVATGPAKTGAFHQELIDCNALISVDPPGRLEDLIHGLPADVGPQ 158 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS-A 177 + + + P + +GL FH + + + Sbjct: 159 PILLRLRPRNQS--KSRFGMPADAVVHCLARLAGESRLRFDGLNFHLSGYLWETRVAALS 216 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKD----------------------------- 208 ++ E I +GGG+ D Sbjct: 217 EAADLIAEARRMGFSPRMIDIGGGLPIQYVDRARYEAHLAAQAPEDYRNGKIPDSFYPYG 276 Query: 209 -------------YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT--------- 246 + + + + + + +EPG A+ Sbjct: 277 SNLSAADWLHRLLEAEMSQGRSVAGYLAREGLTLAMEPGRALADQAAITVFLISRVKALG 336 Query: 247 ---TVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303 V+ + + + + E V L+ + P A + G SCL D+ Sbjct: 337 PDSHVIFVEGSSFSACETWFASEFLVDPILVPATRP--AAQSPPIRAYLAGHSCLDEDVL 394 Query: 304 GEF--HFEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMPT--IAVKNVDGTIKAI 354 F GD + + + GY ++ +N F+ MP VK+ +G + Sbjct: 395 SNRWLSFPIAPHAGDLLVYANTGGYQMDLLENEFHRHAMPARLCVVKDAEGHPILV 450 >gi|211639074|emb|CAR67686.1| Diaminopimelate decarboxylase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] Length = 204 Score = 83.7 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 50/181 (27%), Gaps = 19/181 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ D + ++ + + A K + + + +Y + SL E Sbjct: 25 GTPLWVYDSETIIQKIKLLCQFDV-----VRFAQKACSNTHILRLMREYGVKVDAVSLGE 79 Query: 63 VMLG-HEKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 + F + D ++ + ++ L + Sbjct: 80 IERALRAGFCPGQAESDIVFTADLIDGPTLQQVTKLGIPVNAGSIDMLEHIGR--YRKGH 137 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170 + LRINP + + S+ G +D I + GL H Sbjct: 138 PVWLRINPGFGHGHSQKTNTGGENSKHGIWYQDLPLAIEKIRHYELKLLGLHMHIGSGVD 197 Query: 171 S 171 Sbjct: 198 Y 198 >gi|73537520|ref|YP_297887.1| Orn/DAP/Arg decarboxylase 2 [Ralstonia eutropha JMP134] gi|72120857|gb|AAZ63043.1| Orn/DAP/Arg decarboxylase 2 [Ralstonia eutropha JMP134] Length = 482 Score = 83.7 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 49/405 (12%), Positives = 101/405 (24%), Gaps = 66/405 (16%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ L NN+ + ++ K + + G SS Sbjct: 64 GSPLNVLWPHALRNNVAALRAVLATHCVQAEIFYGAKVNKSQALVKAAVMAGVGIDVSSR 123 Query: 61 YEVMLG-HEKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 +E+ A + + +L++ I +++ +L+ ++ Sbjct: 124 HELRDALRAGADALRICATGPAKTEAFHEQLLAHGALISVDSLEELDDVCACLRRAPAGR 183 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-EIKNVNGLMFHN-NCENKSFLCFS 176 R+ + + + K + E G FH ++ Sbjct: 184 HARVLLRYCPDSARGSRFGMAADTVVQGLKHIASATERLAFEGFHFHLSGYGWETRAQAL 243 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD-------------------------KDYPV 211 L + I +GGG+ YP Sbjct: 244 RELLPLIDAADSMGLTTTMIDIGGGLPVRYVDPDVYTEFLQSQRPEHYRNGIVPASFYPY 303 Query: 212 KDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTT------- 247 + + V + LEPG + Sbjct: 304 GGHIDAATWLDDFLNAPCTAGQSIAAWLRAGGVTLALEPGRCLAAQAGITVFRVTRSKPL 363 Query: 248 -----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302 V+ + + + + E + P A + G SCL D+ Sbjct: 364 GDGRHVVFVEGSSFSACETWFASEFLADPAWI-SAVPPRTVGARPVQAYIAGHSCLDEDV 422 Query: 303 FGEFHFEK---PVKIGDRISFEDVAGYNIN-RKNWFNGINMPTIA 343 GD + + + AGY ++ +N F+ MP Sbjct: 423 L-TNRLLPFGGLPHPGDLLVYANTAGYQMDLLENEFHRHPMPRRV 466 >gi|282910112|ref|ZP_06317920.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282326178|gb|EFB56483.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus WW2703/97] Length = 228 Score = 83.7 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 68/201 (33%), Gaps = 11/201 (5%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + AV I ++ +L + + K + + Sbjct: 80 LVFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139 Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + ++ G + + +++G FH+ N Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199 Query: 177 AMLKNIEKEFGHFITQIEWIS 197 ++K K+ H + I ++S Sbjct: 200 DVVKLYFKKQRHGLKNINFLS 220 >gi|330901748|gb|EGH33167.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 209 Score = 83.3 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 64/190 (33%), Gaps = 15/190 (7%) Query: 2 IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 ++T P ++ D L ++ + AGV+L A+K + M +T+ + G S Sbjct: 18 LETDPLAAFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETIAPLVSGFEIS 76 Query: 59 SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 S E+ + + ++ D ++ + L N I +++++ + + A++ + Sbjct: 77 SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGR 136 Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + L E + + + G H Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHVHAMS 196 Query: 168 ENKSFLCFSA 177 S Sbjct: 197 HQMSVERHEQ 206 >gi|125606503|gb|EAZ45539.1| hypothetical protein OsJ_30199 [Oryza sativa Japonica Group] Length = 259 Score = 83.3 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 53/167 (31%), Gaps = 14/167 (8%) Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT 247 + + + +GGG + F + V++ EPG TL Sbjct: 85 MPPMRVLDIGGGFMAGRTFDEAAAVINRALERHFGDLPCVEVIGEPGRYFAETAFTLAAR 144 Query: 248 VLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP-------YTAMVCGR 295 V+ + S+ + D+ + + G + + V G Sbjct: 145 VIGKRTRGELREYWIDDGLYGSLNCILMDHYVPRPRPLAAAAAGEDTTAATTHASTVFGP 204 Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 +C + D + + +GD + F+D+ Y + FNG I Sbjct: 205 TCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTAAGSNFNGFATSAI 251 >gi|255019228|ref|ZP_05291354.1| hypothetical protein LmonF_18396 [Listeria monocytogenes FSL F2-515] Length = 68 Score = 83.3 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 19/67 (28%), Gaps = 1/67 (1%) Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361 + G+ ++ Y + +N I P + + +Y + Sbjct: 1 MLIWDLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYEN 60 Query: 362 YYNN-LS 367 N LS Sbjct: 61 LVQNDLS 67 >gi|318086929|gb|ADV40065.1| ornithine decarboxylase [Triticum aestivum] Length = 334 Score = 83.3 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 85/302 (28%), Gaps = 15/302 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +++ +Y+ D ++++ GV+ A+KC + L G +S Sbjct: 33 VRSAFYVFDLARVVDLYRGWRRAL--PGVRACYAVKCNPEPALLGALAALGAGFDCASRR 90 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + Y K + + S+ K K ++ L Sbjct: 91 EIEAVLALGVQPGSIVYANPCKPEAHLEYAAEVGVSLATYDSEEEVVKVKRCHPGCELIL 150 Query: 121 RIN-PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 RI P + L + E NV G+ FH + + + Sbjct: 151 RIKGPDGGGPRVDLGTKYGAHEDEVMPLLRAAQREGLNVAGVSFHVGSGASNTDVYRGAI 210 Query: 180 KNIEKEFGH----FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + F + + + +GGG + + F E V++ EP Sbjct: 211 EAARGVFDAAAGLGMPPMRVLDIGGGFMAGPAFDEAAAVINAALERYFGELPCVEVIGEP 270 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPY 288 G T+ V+ + ++ D+ + P G Sbjct: 271 GRYFAETAFTMAARVIGKRTRGEVREYWIDDGLYGTLSCIPMDHYVPHPRPLAVPRAGEK 330 Query: 289 TA 290 T Sbjct: 331 TY 332 >gi|73974233|ref|XP_858612.1| PREDICTED: similar to Antizyme inhibitor 1 (AZI) (Ornithine decarboxylase antizyme inhibitor) isoform 7 [Canis familiaris] Length = 389 Score = 82.9 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 94/343 (27%), Gaps = 33/343 (9%) Query: 38 CFAAWGMFDTLNQYMDGTT--SSS--LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSN 92 + G+ D + L E+ L E E Y K + Sbjct: 8 ANYSVGLLDEGTNLGNVIDNYVYEHTLTEMALVQELGVSPENIIYISPCKQVSQIKYAAK 67 Query: 93 CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 +++ K + K+ L I + + + + Sbjct: 68 IGVNTMTCDNEVELKKIARNHPNAKVLLHIATEDNIGGEEGNMKFGTTLKNCRHLLECAK 127 Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGI-HFTDKD 208 + G+ FH + K + L + F G F + + +GGG + Sbjct: 128 ELDVQIIGVKFHVSSACKESQVYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEFQL 187 Query: 209 YPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE 266 V L F E ++I EPG V++ TL ++ + Sbjct: 188 EEVNHVISPLLDVYFPEGSGIKIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKT 247 Query: 267 AHVPDYLLYQE----------------------SATIYPNTGPYTAMVCGRSCLAGDIFG 304 +Y + +T+ + G SC D Sbjct: 248 GSDEPAFMYYMNDGIYGSFASKLSEDLNTIPEVHKKYKKDEPLFTSSLWGPSCDELDQIV 307 Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 E + +GD + F+++ +++ + FN P I Sbjct: 308 ESCLLPELNVGDWLIFDNMGADSLHEPSAFNDFQRPAIYYMMS 350 >gi|298712993|emb|CBJ26895.1| Ornithine decarboxylase [Ectocarpus siliculosus] Length = 634 Score = 82.9 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 59/217 (27%), Gaps = 21/217 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSLYEVM 64 ++ +D + +L+ VK A+KC + L G +S E+ Sbjct: 94 FFAVDLECVLHKYRRWHDCFPR--VKPFYAVKCNPNSEVVRVLAATPGCGFDCASPAEMD 151 Query: 65 LGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL------- 114 E Y KD + T+ F++ +L K + Sbjct: 152 QVLECGVDPSRIIYANPCKDLAALEHALSAGVATMTFDSKDELYKIRRLLDTRAKVSDGG 211 Query: 115 --HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCEN 169 + + + E C + I + G+ FH Sbjct: 212 LGESSVVQLVLRLRVPDSHSDCPLGEKYGAPEEACSELISLAVELRLPLVGISFHCGSGC 271 Query: 170 KSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIH 203 ++ + L + F + + +GGG Sbjct: 272 QNAQAYPEALAVAKSVFDLAAQKGVMLTLLDIGGGFP 308 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 16/44 (36%) Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 A+V G S L D+ + GD + F + Y + Sbjct: 567 HAVVMGPSGLPTDVVARKRLPSSLGPGDWLYFSQMGAYTASIAT 610 >gi|330937820|gb|EGH41666.1| ornithine decarboxylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 171 Score = 82.9 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 46/152 (30%), Gaps = 9/152 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 +TP+ +ID + D + K+ A+K A + + L + +S+YE Sbjct: 25 ETPFVVIDTDIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKEKGSSFDIASIYE 82 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + G E +Y K + ++ + L A + Sbjct: 83 LDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGSKVYVR 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI 151 + S +R F + D + Sbjct: 143 ILTEGS----TTADWPLSRKFGCQTDMAIDLL 170 >gi|169840718|ref|ZP_02873831.1| diaminopimelate decarboxylase [candidate division TM7 single-cell isolate TM7a] Length = 152 Score = 82.9 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 5/138 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 KTP Y++D++ + +D ++ K + A K F GM + S Sbjct: 13 KTPLYVMDQELIETTIDKMKEAFQSTRFKTRIAYAGKAFLTTGMIKLVESKGLDLDVVSG 72 Query: 61 YEVMLGH-EKFGGET-HAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E+ H F + H + EI+ AV DTI+ + ++ K + ++ KK Sbjct: 73 GELYTAHKAGFPMKRVHLHGNNKLVNEIEMAVEYGIDTIVVDNEDEIAKIEKVCKEKGKK 132 Query: 118 IGLRINPSVSYSKFILAD 135 + + Sbjct: 133 QAVLVRIDPGIEAHTHHY 150 >gi|109087157|ref|XP_001083537.1| PREDICTED: antizyme inhibitor 1 isoform 6 [Macaca mulatta] Length = 363 Score = 82.9 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 91/323 (28%), Gaps = 31/323 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC +A + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + + G+ FH + K + L + Sbjct: 158 EDNIGGEEGNMKFGTTLKNCKHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G + + +GGG + V L F E V+I EPG V Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337 Query: 278 -SATIYPNTGPYTAMVCGRSCLA 299 + +T+ + G SC Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDE 360 >gi|219363513|ref|NP_001137051.1| hypothetical protein LOC100217223 [Zea mays] gi|194698164|gb|ACF83166.1| unknown [Zea mays] Length = 168 Score = 82.5 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 1/77 (1%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 +P+YL K ++L N + + A+K + L + G S E+ Sbjct: 92 SPFYLYSKLQILRNFAAYRDALQGLRSIVGYAVKANNNLPVLRVLRELGCGAVLVSGNEL 151 Query: 64 MLGH-EKFGGETHAYNV 79 L F Sbjct: 152 RLALQAGFDPARCGSCS 168 >gi|213586305|ref|ZP_03368131.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 95 Score = 82.5 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 7/86 (8%) Query: 286 GPYTAMVCGRSCLAGDIF------GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + G C GD F EF K +GD ++F D Y I + +N Sbjct: 6 HDAWIKLAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPR 65 Query: 340 PTIAVKNVDGTIKAIREF-SYNDYYN 364 + + + +G + IR SY D Sbjct: 66 TGVVMIDKNGETRLIRREDSYEDMVK 91 >gi|32473071|ref|NP_866065.1| diaminopimelate decarboxylase [Rhodopirellula baltica SH 1] gi|32397750|emb|CAD73751.1| probable diaminopimelate decarboxylase [Rhodopirellula baltica SH 1] Length = 555 Score = 82.1 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 50/406 (12%), Positives = 113/406 (27%), Gaps = 80/406 (19%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P L+ + + N++ + + G ++ A K G D + G ++S Sbjct: 117 GSPLNLVRPRTMRRNVEELNAVARERGLDFRVFFARKANKCLGFVDEAIESNFGVDTASE 176 Query: 61 YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ + D ID L I + +L D+A +L ++ Sbjct: 177 NELRQCLQQCVPAKDLICTAAIKSDSLIDLCLQQQVCIAVDNDDELQVVVDRANELGRQA 236 Query: 119 GLRINPSVSYSKFIL-ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN------------ 165 + + + ++ S V G+ FH Sbjct: 237 RIALRLGGFQHEGNKLPTRFGFDVDRDCDLPQRLTSLPVMVQGIHFHLDGYDAGQRVSAL 296 Query: 166 ------------------------NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGG- 200 ++ + + + ++ G Sbjct: 297 SVAMEWVERLRAVGQPVEFIDMGGGFPMSYLEEHRQWATFWKEHRRALLGERDTLTYRGH 356 Query: 201 ------------GIHFTDKDY-------------PVKDFCQRLKEFSEKYSVQIYLEPGE 235 G + + + + + + +VQ+ EPG Sbjct: 357 GLGLAIEGGRVVGQPKMYPFFQRPVRGHWLAGVLDSRIEGKTIADRLVELNVQLRCEPGR 416 Query: 236 AIVTNTTTLNTTVLDISENIKNLV---------IVDSSVEAHVPDYLLYQESATIYPNTG 286 +I+ V +N + +S + + D +L + ++ T Sbjct: 417 SILDGCGLTVARVEFRKQNAEGDWLIGLSMNRTQCRTSSDDFLVDPILVPKQSSFGRATE 476 Query: 287 PYTA--MVCGRSCLAGDIFG--EFHFEKPVKIGDRISFEDVAGYNI 328 + G C ++ + F V+ GD I+F + AGY + Sbjct: 477 TKPMLGYLVGAYCTESELISLRKMQFPSGVQRGDLIAFPNTAGYFM 522 >gi|241997404|ref|XP_002433351.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215490774|gb|EEC00415.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 357 Score = 81.7 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 89/303 (29%), Gaps = 30/303 (9%) Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 + Y K S + K + ++ LRI + + Sbjct: 6 GVSPDRIVYANTIKSSSHLDFASEHGVTLMTFDCMEEL--GKISDKNARLLLRIASNETG 63 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188 S + + V G+ FH + F+ + F Sbjct: 64 SGITMNNKFGCRLEDAGNLLQIASFMGFKVVGIAFHVGAAYRCPDIFARSIAEARSVFDE 123 Query: 189 ---FITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPGEAIVT 239 + + +GGG + C+ ++ ++Y ++ EPG+ VT Sbjct: 124 GIRIGHPMTVLDIGGGFTGGLRSHDKLLKLCETIRLAVDEYFPASSGVRVIAEPGQFFVT 183 Query: 240 NTTTLNTTVL-----------------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 + TL T V+ DI N ++ ++ + + + Y Sbjct: 184 SAYTLVTRVVAERRKDIEISGKLLNHKDIFINESLCNCINRNLFRFMD--IGMRPLNPPY 241 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + + V G +C D + V + + + +++ Y + + FNG P + Sbjct: 242 ERPCNFLSTVWGATCNPLDCILDKQPLFEVFVNEWLLMDNMGAYTLVGASGFNGFGFPPV 301 Query: 343 AVK 345 Sbjct: 302 HYV 304 >gi|296394834|ref|YP_003659718.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] gi|296181981|gb|ADG98887.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] Length = 453 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 65/403 (16%), Positives = 122/403 (30%), Gaps = 57/403 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQY-MDGTTSSSLY 61 P++++ ++ NLD+ + + AGV+ + K A G +S Sbjct: 41 PFHVVFPERFAENLDSFIRALEAAGVEGVVYYGKKANKARCFTRRCANRDGAGVDVASSA 100 Query: 62 EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKI 118 E++ G + A + + I + + +L + AQ +I Sbjct: 101 ELVEALAAGVRGKDLVVTGPAKNTELLWTAARHGALIAIDALDELERTIALAQDIAGVRI 160 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLC 174 LR+ P + + D L +++ + +++G + S L Sbjct: 161 LLRVLPETNGASRFGLDTMELERALARCAEERERVRMEGFSFHLSGYAVAPRAQLSSELV 220 Query: 175 FSAMLKNIEKEFGH----------------------FITQIEWISLGGGIHFTDKDYPVK 212 + Q EW + + Sbjct: 221 DRCVQARARGLVADSVSIGGGFAMNYLEPGDWAEFMSGYQDEWFHARKKFAYFYPYHQTP 280 Query: 213 DFCQ---------------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 L E K V++ LEPG A++ V E Sbjct: 281 VGADMLADILRSGLAPGYRALAEKFAKNKVRLLLEPGRALLDGCGFSVFPVQGFKERGDY 340 Query: 258 LVIVDSSVEAHVPDYL---LYQESATIYPNTGPY---TAMVCGRSCLAGDIFG--EFHFE 309 VI V V Y ++P TG + A G +CL D+ + Sbjct: 341 GVIAVGGVSMSVSAQWFDSEYLPDPELWPETGEHEPVPACAGGSTCLETDMLMWRKVWLA 400 Query: 310 KPVKIGDRISFEDVAGYNINRK-NWFNGINMPT-IAVKNVDGT 350 + + GD + + + AGY ++ + F+ + +P I V DG Sbjct: 401 RRPQFGDLLVYHNTAGYQMDFTESGFHQLPLPPKIPVMLKDGR 443 >gi|149575860|ref|XP_001506230.1| PREDICTED: similar to antizyme inhibitor 1, partial [Ornithorhynchus anatinus] Length = 301 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 85/254 (33%), Gaps = 13/254 (5%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ I +K +KC + + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKNSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKSEIAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 98 VQELGVPPENIIYVSPSKQTSQIKFAAKAGVNIMTCDNEMELKKIALNHPNAKLLLHIAT 157 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 ++ + + + + G+ FH + K + L + Sbjct: 158 EDISGDEEMSMKFGTTLKNCRHLLECAKELQVQIVGVKFHVSSSCKEPQVYIHALSDARC 217 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLEPGEA 236 F G F ++ + +GGG T ++ +++ ++ + Y + + EPG Sbjct: 218 VFDMAGEFGFKMNILDIGGGF--TGSEFQLEEVNHVIRPLLDIYFPEGSGIKVIAEPGSY 275 Query: 237 IVTNTTTLNTTVLD 250 V++ TL ++ Sbjct: 276 YVSSAFTLAVNIIA 289 >gi|328675890|gb|AEB28565.1| Diaminopimelate decarboxylase [Francisella cf. novicida 3523] Length = 440 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 53/407 (13%), Positives = 121/407 (29%), Gaps = 63/407 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P+++I + NNL + N + ++ K A + + +S+ E Sbjct: 32 PFHIIHPKSFTNNLSDFQKVLNNHNIVGQVYFGKKANKAGAWLTEVAKLNGAVDVASVPE 91 Query: 63 VM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 ++ L G A D + + + + + +L + + + K+ + Sbjct: 92 LIHTLSKGVQGKNIGVTGAAKSDELLWLAARHGALVAIDALDELERAINIVANTNDKLRI 151 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + S N ++ + ++ F + + M Sbjct: 152 LLRVLPPNSPNSRFGFNSKDI---VTALERCKDAKNHITMEGFSFHLDGYLVEPRVEMAF 208 Query: 181 ---NIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQR------------------- 217 + + + IS+GGG + ++ +F Sbjct: 209 ILIDWCIKAKEYGFPSSSISIGGGFACSYVEEEDWHNFKAAYSPDQFHASKTFSHFYPYY 268 Query: 218 ---------------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 L +Q+YLEPG A++ V +N + Sbjct: 269 QSPTGADMLNAILESSIGNISLANKLIDTQIQLYLEPGRALLDGAGMTVFPVQGFKKNDE 328 Query: 257 NLVIVDSSVEAHVPDYLLYQESATI--------YPNTGPYTAMVCGRSCLAGDIF--GEF 306 + ++ + + + + E P + G SC+ D+ + Sbjct: 329 HGIVTVAGLSMSLSEQWKNSEFLPTPILVQRGQLRPQNPVFVAIGGSSCMEYDMLTWRKI 388 Query: 307 HFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKN-VDGTI 351 + GD I + + AGY +++ + F+ + +P V DG Sbjct: 389 KLPAEPRYGDLIIYPNTAGYQMDKNESEFHQLPLPPKVVVTQQDGEF 435 >gi|207093374|ref|ZP_03241161.1| carboxynorspermidine decarboxylase [Helicobacter pylori HPKX_438_AG0C1] Length = 159 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 15/153 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP Y+++ ++L N +R+ +G K+LLALK +A W F L Q ++G +S LY Sbjct: 7 IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66 Query: 62 EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112 E L E+FGG E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK + Sbjct: 67 EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126 Query: 113 KL------HKKIGLRINPSVSYSKFILADPNRP 139 +L K+GLRINP S + +P Sbjct: 127 QLESLGLSPIKMGLRINPLYSEVTPAIYNPCSK 159 >gi|302517698|ref|ZP_07270040.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78] gi|302426593|gb|EFK98408.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78] Length = 480 Score = 81.0 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 6/151 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP Y++D+ ++ +AG + A K F + L++ G S E Sbjct: 41 GTPLYVLDEDQVRARARAYRAAFPDAG--VHYAAKAFLCRALVRWLDEEDIGLDVCSAGE 98 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK-LHKKI 118 + L F + + K A ++ + V ++ + +++ Sbjct: 99 LELAVAAGFPADRVLLHGNAKSPRDLASALRLGVGRVVLDGVGEITRLAALVPPGERQRV 158 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD 149 +R+ P +S + G D Sbjct: 159 LVRVVPGISAGHHDKVRTGDEDQKFGLSLTD 189 >gi|196013978|ref|XP_002116849.1| hypothetical protein TRIADDRAFT_60904 [Trichoplax adhaerens] gi|190580567|gb|EDV20649.1| hypothetical protein TRIADDRAFT_60904 [Trichoplax adhaerens] Length = 397 Score = 81.0 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 85/324 (26%), Gaps = 58/324 (17%) Query: 70 FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVS 127 + Y+ K A+ + F++ +L + K + L+++ S + Sbjct: 62 VKNDNIIYSNPCKGLSHLKVALKKGITLMTFDSEGELQRIKRMVPHAKLLLRLKVDDSKA 121 Query: 128 YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG 187 L NV G+ FH F+ ++ +K F Sbjct: 122 AFPLGAKYGVPFSRVL--HLFKVARKLSLNVIGISFHVGSGCDDPDSFTKAIEKSKKAFN 179 Query: 188 ---HFITQIEWISLGGGIHFT-------------------------------DKDYPVKD 213 + + +GGG Sbjct: 180 LAKEIGLDLTLLDIGGGYPGIEDTLFENVKRDLLIPRLIILICMSDLMAKALYFQVCGAI 239 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--------ISENIKNLVIVDSSV 265 K F + V+I EPG+ T++ L T V+ + Sbjct: 240 TEALDKYFPTECGVEIIAEPGKYFTTSSMILVTNVIGKRLRYDDNVKTEQNQSHKESMEC 299 Query: 266 EAHVPDYLLY----------QESATIYPNTGP--YTAMVCGRSCLAGDIFGEFHFEKPVK 313 H+ D L + + + + + G +C D ++ Sbjct: 300 MYHINDGLHGSFLRRLFTKEPFIPNVLKSKSGQFHRSSIWGPTCNGLDCIASGQTIPEME 359 Query: 314 IGDRISFEDVAGYNINRKNWFNGI 337 GD FE++ Y + FNG Sbjct: 360 AGDWTYFENLGAYASAASSNFNGF 383 >gi|170596393|ref|XP_001902748.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Brugia malayi] gi|158589386|gb|EDP28402.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Brugia malayi] Length = 475 Score = 81.0 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 101/356 (28%), Gaps = 35/356 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL-NQYMDGTTSSSLYEV 63 P+++++ + + + L+ +K +K AL+C + + L G S+ YEV Sbjct: 57 PFFVMNVELVDDILENW--FKKMPDIKPYYALRCNSDNVLLKLLTRNTNMGLCCSNRYEV 114 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + Y CD ++ + + I LR+ Sbjct: 115 EMAMKFVNVDRIIYRNPLWTRGSIRHAKECDIQTVIIETEDDLKRFAMYYPEADIILRVT 174 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 L + N + + S + G+ + + +S + Sbjct: 175 MDRKIISDPLMEDNLDIEKAIHLLRTAKNSS-VRIRGISLSVRLVCATPMLYSYAIAQCR 233 Query: 184 KEFG---HFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSV-------QIYL 231 + F +++ + +G G + L + +I Sbjct: 234 RLFDIGLEVGHKMDILDVGDGFPCMTTVDGLSFDQIAKSLNVALAHFFPSKFFKDLKIIA 293 Query: 232 EPGEAIVTNTTTLNTTVL------------------DISENIKNLVIVDSSVEAHVPDYL 273 EP +L T V+ + + + + + Sbjct: 294 EPSYYFAAFPFSLITRVINKRFIDGSFLTNDESDAGAVGYIYQINEGFYGAFGCKLLTHR 353 Query: 274 LYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 S I+ T + G D+ P+++GD + + + Y I Sbjct: 354 NPTCSPLIFFGEKRNTHAAIIGPESCDTDVILSLTRLPPLQVGDWLIWHHMGAYTI 409 >gi|86651670|gb|ABD14423.1| ornithine decarboxylase 1 [Homo sapiens] Length = 154 Score = 81.0 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 46/153 (30%), Gaps = 1/153 (0%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY 77 +++ V A+KC + + TL G +S E+ L E Y Sbjct: 2 KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQSLGVPPERIIY 61 Query: 78 NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN 137 K +N + S++ K K+ LRI S + L Sbjct: 62 ANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSKAVCRLNVKF 121 Query: 138 RPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 R ++ + +V G+ FH Sbjct: 122 GATLRTSRLLLERAKELNIDVVGVSFHVGSGCT 154 >gi|307321615|ref|ZP_07601007.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83] gi|306892714|gb|EFN23508.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83] Length = 457 Score = 81.0 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 56/411 (13%), Positives = 98/411 (23%), Gaps = 68/411 (16%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P LI L NL + K + G+ G SS+ Sbjct: 39 GSPLNLIWPGTLQENLAALEGALVDNRVAHAIYYGAKVNKSPGLMQAALAAGAGLDVSSV 98 Query: 61 YEVMLGHE-KFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 YE+ G A +L I ++ +L Sbjct: 99 YELRDARRLGADGARLVATGPAKTRAFHQELLDCEALISVDSPEELEDLVALLPADAAPQ 158 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS-A 177 + + + P + +GL FH + + Sbjct: 159 PILLRLQ--PQDQKKSRFGMPADAVVHCLARLSGENRLRFDGLHFHLSGYRWETRLAALN 216 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY------- 230 ++ I +GGG+ D K + E Y Sbjct: 217 QAADLIAGARRMGFSPAMIDIGGGLPVQYVDEA-KYQAHLAAQRPEDYRTGTIPDSFYPY 275 Query: 231 ------------------------------------LEPGEAIVTNTTTLNTTVLDISEN 254 +EPG A+ +L + Sbjct: 276 GGALSAADWLRQLLQAEMSDGRSVATYFAQEALTLAMEPGRALADQAAISVFRILRVKAL 335 Query: 255 IKNLVIVD------------SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302 + ++ + E + L+ A + P A + G SCL D+ Sbjct: 336 GPDAHVIFLEGGSFSACETWFASEFLIDPILVPATRA--AAQSAPIRAYLAGHSCLDEDV 393 Query: 303 FGEFH--FEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMPTIAVKNVDGT 350 F GD + + + GY ++ +N F+ MP D Sbjct: 394 ISNRWLTFPTAPGAGDLLVYANTGGYQMDLLENEFHRHPMPARFCVTNDAE 444 >gi|156340084|ref|XP_001620348.1| hypothetical protein NEMVEDRAFT_v1g148439 [Nematostella vectensis] gi|156205145|gb|EDO28248.1| predicted protein [Nematostella vectensis] Length = 166 Score = 81.0 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 250 DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309 +++ + AHV L + Y++ + G +C D E Sbjct: 69 YVNDGVYGSFNCILFDHAHVKPVLTKKPKPD----ESFYSSSIWGPTCDGLDRIVERFDL 124 Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 +++GD + FE++ Y + + FNG PT+ Sbjct: 125 PELQVGDWMLFENMGAYTVAASSTFNGFQRPTLYYVMS 162 >gi|90079227|dbj|BAE89293.1| unnamed protein product [Macaca fascicularis] Length = 354 Score = 80.6 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 84/307 (27%), Gaps = 28/307 (9%) Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 E Y K + I +++ K + K+ L I + Sbjct: 8 GVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIATEDNI 67 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186 + + + + + G+ FH + K + L + F Sbjct: 68 GGEEGNMKFGTTLKNCKHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARCVFDM 127 Query: 187 -GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTNTT 242 G + + +GGG + V L F E V+I EPG V++ Sbjct: 128 AGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVEIISEPGSYYVSSAF 187 Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE----------------------SAT 280 TL ++ + +Y Sbjct: 188 TLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPEVHKK 247 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + +T+ + G SC D E + +GD + F+++ + + + FN P Sbjct: 248 YKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFNDFQRP 307 Query: 341 TIAVKNV 347 I Sbjct: 308 AIYYMMS 314 >gi|325849897|ref|ZP_08170936.1| hypothetical protein HMPREF9246_0184 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325479921|gb|EGC83004.1| hypothetical protein HMPREF9246_0184 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 72 Score = 80.6 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 18/63 (28%) Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 E V+ D + Y + + +N + P + A++ S D Sbjct: 1 MIEKVKLAKVERDDLLLVLFAGAYTYSMSSNYNKLLKPAVVFVEDGKDYCAVKRQSLEDL 60 Query: 363 YNN 365 Sbjct: 61 IKR 63 >gi|147772643|emb|CAN73820.1| hypothetical protein VITISV_034956 [Vitis vinifera] Length = 167 Score = 80.2 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 1/69 (1%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+YL K ++ N + + + + A+K + + L + G S E+ Sbjct: 2 PFYLYSKPQITRNFEAYKEALEGLRLIIGYAVKANNNLKILEHLRELGCGAVLVSGNELR 61 Query: 65 LG-HEKFGG 72 F Sbjct: 62 FAFRAGFDP 70 Score = 66.3 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 19/51 (37%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGT 55 P+YL K ++ N + + + A+K + + L + G Sbjct: 102 PFYLYSKPQITRNFEAYKEALEGLRSIIGYAIKANNNLKILEHLKELGCGA 152 >gi|213646793|ref|ZP_03376846.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 172 Score = 80.2 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 4/127 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 TP+Y+ + +++ N+ K A K + G+ + ++S Y Sbjct: 45 PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKI 118 EV E F G+ +N K D I +++ +L ++KL K Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164 Query: 119 GLRINPS 125 + + Sbjct: 165 NVCVRVE 171 >gi|73949909|ref|XP_863982.1| PREDICTED: similar to ornithine decarboxylase-like protein isoform 2 [Canis familiaris] Length = 365 Score = 80.2 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 43/300 (14%), Positives = 91/300 (30%), Gaps = 30/300 (10%) Query: 67 HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126 Y K + + + +++ K K+ L I Sbjct: 6 RIGVPASKIVYANPCKQIAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIATDD 65 Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 S+S L+ + + + V G+ FH ++ + + F Sbjct: 66 SHSLSHLSFKFGASLKSCRHLLENAKRSHVEVVGVSFHVGSGCPDLHAYTQSIADARLVF 125 Query: 187 ---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGEAI 237 ++ + LGGG + + + F E V I G Sbjct: 126 EMGAELGHRMHILDLGGGFPGLEGAKVRFEEIATVINSALDLYFPEGCGVDILARLGRYY 185 Query: 238 VTNTTTLNTTVL-------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287 VT+ TL +++ D + ++ H+ + + ++ ++ NT P Sbjct: 186 VTSAFTLAVSIIAKKEVLLDQPGREEETGSTPKTIVYHLGEGVYGIFNSVLFDNTCPTPI 245 Query: 288 -----------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 Y++ + G D E + + +GD + FE++ Y + + F G Sbjct: 246 LQKKSSTEQPLYSSSLWGPVADGSDCVAEGLWLPQLHVGDWLVFENMGAYTVGMGSLFGG 305 >gi|323332699|gb|EGA74104.1| Spe1p [Saccharomyces cerevisiae AWRI796] Length = 291 Score = 79.8 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 83/280 (29%), Gaps = 36/280 (12%) Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH 164 K K ++ LRI S ++ L+ + I+ N+ G+ FH Sbjct: 10 ELHKIKKFHPESQLLLRIATDDSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFH 69 Query: 165 NNCENKSFLCFSAMLKNIEKEFGHF-----ITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219 F +++ F + ++ + +GGG F L+ Sbjct: 70 VGSGASDFTSLYKAVRDARTVFDKAASEYGLPPLKILDVGGGFQFESFKESTAVLRLALE 129 Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAH 268 EF V I EPG V TL + V+ I N ++ + H Sbjct: 130 EFFPVGCGVDIIAEPGRYFVATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDH 189 Query: 269 VPDYLLYQESATIYPN------------------TGPYTAMVCGRSCLAGDIFGE-FHFE 309 + + PY + G +C D + ++ + Sbjct: 190 QEPHPRTLYHNLEFHYNDFESTTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMK 249 Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGI-NMPTIAVKNVD 348 V +GD F + Y + FNG I + + Sbjct: 250 HDVIVGDWFYFPALGAYTSSAATQFNGFEQTADIVYIDSE 289 >gi|16552627|dbj|BAB71356.1| unnamed protein product [Homo sapiens] gi|21754323|dbj|BAC04489.1| unnamed protein product [Homo sapiens] gi|119627878|gb|EAX07473.1| arginine decarboxylase, isoform CRA_e [Homo sapiens] gi|119627887|gb|EAX07482.1| arginine decarboxylase, isoform CRA_e [Homo sapiens] Length = 365 Score = 79.8 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 89/298 (29%), Gaps = 34/298 (11%) Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 K + + + +++ K K+ L I S+ Sbjct: 8 GIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIATDDSH 67 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG- 187 S L+ + + + V G+ FH ++ + + F Sbjct: 68 SLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARLVFEM 127 Query: 188 --HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGEAIVT 239 ++ + LGGG T+ + + F E V I+ E G VT Sbjct: 128 GTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGRYYVT 187 Query: 240 NTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDYLLYQ 276 + T+ +++ + I +S + ++ + Q Sbjct: 188 SAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPTPILQ 247 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + Y++ + G + D E + + +GD + F+++ Y + + F Sbjct: 248 KKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGSPF 303 >gi|295134035|ref|YP_003584711.1| diaminopimelate decarboxylase [Zunongwangia profunda SM-A87] gi|294982050|gb|ADF52515.1| probable diaminopimelate decarboxylase [Zunongwangia profunda SM-A87] Length = 487 Score = 79.8 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 66/416 (15%), Positives = 125/416 (30%), Gaps = 95/416 (22%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ N + +N +K + A K A G ++S Sbjct: 41 GSPLNILHPASFAKNCTRFKEVFQNHDIKFGIFYARKANKAKAFVKQAFIENIGVDTASE 100 Query: 61 YEVMLGHEKFGGETHA--YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E++ + G H + ++ L N I+ + + D A+K + K Sbjct: 101 RELLQSLQLGGDGDHLVLTSAIKTKEQVKTALQNNVPIVLDNDDECVLVNDLAEKNNCKA 160 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-----------NGLMFHNNC 167 + S + + +SR G D E +K+V GL FH + Sbjct: 161 RVAFRLSG-----FYVNKKKLYSRFGFDIDDIEEYLMKHVGKDKKYNNFKVEGLHFHLDG 215 Query: 168 ENKS------FLCFSAMLKNIEKEFGHFITQI-------------EWISLG--------- 199 + C S + K E +F + EW++ Sbjct: 216 YSTRQRSEALLHCISLIQKLRENDFSFRFIDMGGGILINYLKHKEEWLNFDVRLKESLKG 275 Query: 200 ------------------GGIHFTDKDYPVKDFCQRLKEF-----------------SEK 224 G I K YP + K +K Sbjct: 276 KISPITFNNNGLGYRFEDGIIKGDRKTYPYFNEINSDKFLEEILKYSDQNGSSVASLLQK 335 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV----------IVDSSVEAHVPDYLL 274 +++I +EPG ++V + V+ ++ K ++ SS + + +++ Sbjct: 336 ENIEIRIEPGRSLVNQSGITMARVVHRKKDAKGQWLIGLEMNMSQMMSSSADFMLDPFVM 395 Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYNI 328 Y G CL D+ + + +IGD + F + AGY + Sbjct: 396 YANLDQDKTEEKLVDVYFTGAYCLERDVLLKRKVTLPKLPEIGDVVVFVNTAGYMM 451 >gi|294886251|ref|XP_002771632.1| Dus1p, putative [Perkinsus marinus ATCC 50983] gi|239875338|gb|EER03448.1| Dus1p, putative [Perkinsus marinus ATCC 50983] Length = 720 Score = 79.4 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 41/338 (12%), Positives = 86/338 (25%), Gaps = 43/338 (12%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 L+D +L + + + A+KC + TL +++ E+ L Sbjct: 47 LLDLDQLERQMKKWKELLPR--IIPYYAMKCNPEPMLVKTLYHLGCRFDCATINEMKLVK 104 Query: 68 E-----KFGGETHAYNVAY------------KDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 H N I A + I+ ++ ++ K Sbjct: 105 SILSENMGDPNAHIINEMMASHIVYANPNKLPSHLIGARDLGVEYIVADSALEIAKIAHY 164 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + L + + + ++ + NV G+ FH Sbjct: 165 HPTAKLLLRLACVDNNAQCPMSSKFGASLGVAVNVLLEEAVN-HGLNVVGVSFHVGSGCS 223 Query: 171 SFLCFSAMLKNIEKEFG----HFITQIEWISLGGGI--------HFTDKDYPVKDFCQRL 218 + L + + F F ++ + +GGG K Sbjct: 224 DVHSITKALVDAREVFDAAASRFGMKLSILDIGGGFQGVDREGSPLNFKSMATVVNSLLD 283 Query: 219 KEFSEKYSVQIYLEPGEAIVTNT-----TTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273 F + V+I EPG + V + + + + P Sbjct: 284 TLFPDPDEVRIIAEPGRYEWWKSIGSPRYVTAPMVDQSELAFRMMTRKYGAQFCYTPMMH 343 Query: 274 LYQESATIYPNTGPYTA-----MVCGRSC-LAGDIFGE 305 + + + + + C GD+ E Sbjct: 344 AKSFATSKKYREKNFETAPGDSPLAAQFCGDDGDVIVE 381 >gi|200131|gb|AAA39848.1| ornithine decarboxylase (EC 4.1.1.17) [Mus musculus] Length = 142 Score = 79.4 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 26/63 (41%) Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 Y++ + G +C D E + +GD + FE++ Y + + FNG P I Sbjct: 29 EKHYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYY 88 Query: 345 KNV 347 Sbjct: 89 VMS 91 >gi|1149670|emb|CAA60230.1| lysA [Clostridium perfringens] Length = 160 Score = 79.4 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 7/147 (4%) Query: 8 LIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 D++ + +N K G ++ A K F M + +N+ S E+ Sbjct: 3 CYDEELVRSNCRRYYNAMKCEERGNRVTYAGKAFINMSMCNLVNEENLYLDVVSGGELYT 62 Query: 66 G-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120 F E ++ K V I + + +L AQ+ +K+ L Sbjct: 63 AYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRVQKVYL 122 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKC 147 RI P V + S+ G Sbjct: 123 RITPGVEAHTHEYIKTGQLDSKFGFPV 149 >gi|291510152|gb|ADE10032.1| unknown [Tremella fuciformis] Length = 417 Score = 79.4 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 80/265 (30%), Gaps = 19/265 (7%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++ D + + V++ A+KC + + L+ +S EV Sbjct: 103 FFAADLSAVYEAVQMWRASALGERVEIFYAIKCNPSPVVLHFLSLLGLSFDCASASEVNQ 162 Query: 66 GH---EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 K + K A D + F+ +L K K + + Sbjct: 163 VLSLPAKPDPRRIIFANPCKAPSHIRQAAQGGVDMMTFDNADELYKVKRTHPTAKLVLRI 222 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS---A 177 + S S + L + G + NV G+ FH K FS Sbjct: 223 LTDDSKSLCRLGLKYGAPLSTCPGLLAT--AKQLGLNVVGVSFHVGSGCKDPAQFSDAFW 280 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLE 232 K + + +GGG + + +++ + Y ++ E Sbjct: 281 RAKKVFNMAKEAGYDFSLLDIGGGF----ERETFAQMSEVVRDALDVYFPAASGVRVIAE 336 Query: 233 PGEAIVTNTTTLNTTVLDISENIKN 257 PG +V++ TL T+++ Sbjct: 337 PGRFLVSSAFTLATSIIARRRAHMP 361 >gi|119627883|gb|EAX07478.1| arginine decarboxylase, isoform CRA_j [Homo sapiens] Length = 320 Score = 79.4 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 89/298 (29%), Gaps = 34/298 (11%) Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 K + + + +++ K K+ L I S+ Sbjct: 8 GIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIATDDSH 67 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG- 187 S L+ + + + V G+ FH ++ + + F Sbjct: 68 SLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARLVFEM 127 Query: 188 --HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGEAIVT 239 ++ + LGGG T+ + + F E V I+ E G VT Sbjct: 128 GTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGRYYVT 187 Query: 240 NTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDYLLYQ 276 + T+ +++ + I +S + ++ + Q Sbjct: 188 SAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPTPILQ 247 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 + + Y++ + G + D E + + +GD + F+++ Y + + F Sbjct: 248 KKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGSPF 303 >gi|330901814|gb|EGH33233.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 185 Score = 79.4 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 55/184 (29%), Gaps = 14/184 (7%) Query: 183 EKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYL--EPGEAI 237 K Q+ ++GGGI + + + C+ L++ + L EPG I Sbjct: 1 WKALARDPGQLTHFNVGGGIGVDYLNSQQFDWQRLCRYLEKRLGEQHDAPILRFEPGRFI 60 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPYT------- 289 VLD + +V + I+ T P + Sbjct: 61 SAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQSHDHPVIHLPTAPQSTDSSEQA 120 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVD 348 + G+ C D+ K V IGD + Y N + F P+ Sbjct: 121 YTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGYNISHADFLCHPRPSQHFVRNG 180 Query: 349 GTIK 352 ++ Sbjct: 181 ERVR 184 >gi|196014088|ref|XP_002116904.1| hypothetical protein TRIADDRAFT_60920 [Trichoplax adhaerens] gi|190580622|gb|EDV20704.1| hypothetical protein TRIADDRAFT_60920 [Trichoplax adhaerens] Length = 400 Score = 79.4 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 93/328 (28%), Gaps = 27/328 (8%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +Y+ + ++ + + + V+ A+KC + TLN G ++S E+ Sbjct: 34 FYIANIGDVIYKVQRWMSLLPR--VQPFYAVKCNNDINLLATLNALGVGFDAASKNEMEA 91 Query: 66 -GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K + + K K K+ LRI Sbjct: 92 IVKICAHSSKVIYANPCKQISHLKFTERHGIALMTFDNVSELHKIKRCYPEAKLLLRIKI 151 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + L++ NV G+ FH F++ ++ K Sbjct: 152 DDFGTLYHLSEKYGVDIEDCPNQLQVARDLQLNVVGIGFHIGGGRYDGEIFASAIQLARK 211 Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPGEA 236 F + + +GGG D + C ++++ ++Y +I EPG Sbjct: 212 AFHYGKSIGYNFDILDIGGGFP-GYADAKFETICAKIRQALDEYFPIEDQVKIMSEPGRY 270 Query: 237 IVTNTTTLNTTVLDIS---------------ENIKNLVIVDSSVEAHVPDYLLYQESATI 281 L V+ + S + D+ Sbjct: 271 FAERAFHLVMDVIGKREINAKELTAQGEQKKYAYYVNESLHGSFGNVLHDFDNQSFLPVS 330 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFE 309 G +++ V G SC D + Sbjct: 331 KSLEGLFSSTVWGYSCSGLDYLLKECQL 358 >gi|302554822|ref|ZP_07307164.1| orn/DAP/Arg decarboxylase 2 [Streptomyces viridochromogenes DSM 40736] gi|302472440|gb|EFL35533.1| orn/DAP/Arg decarboxylase 2 [Streptomyces viridochromogenes DSM 40736] Length = 500 Score = 79.4 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 24/226 (10%), Positives = 65/226 (28%), Gaps = 13/226 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + +P +++ ++ NL+ + + + ++ A K + + L G +S Sbjct: 45 LGSPLHVVVPDQIAENLERFRSVYRAHHLSGQVFYAHKANRSSALLRRLAATDAGVDVAS 104 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 L E+ F + + T+ + +L++ + Sbjct: 105 LGELQHALGAGFTADRITATGPKNPEFLWLAARTGVTVSVDGTDELDQLASLVRTFGLAP 164 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 +R+ +S + SR G ++ +E V + + Sbjct: 165 -VRVLLRLSGFEASGVKVLSRRSRFGTPVRELDTLLKSVERHGDAVELTGVGYHLDTTGI 223 Query: 173 LCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC 215 + L+ + + +GGG + + Sbjct: 224 AEKATALEGSLAALEACRSRGLRPRAVDVGGGFGVSYLAEREQWEA 269 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 15/118 (12%) Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-----------LVIVDSSVEAHVPDY 272 ++ ++ EPG A++ VL++ I + Sbjct: 342 EHLYDLHTEPGRALLDQCGLSLARVLEVRGPEPGGELLVRLAAKADDIALEDHGVLMDPV 401 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH--FEKPVKIGDRISFEDVAGYNI 328 ++ + P GP + G CL D+ + GD ++F + AGY + Sbjct: 402 VV--PRSGAGPGEGPVAVHLFGGLCLETDLITRRTVFLPRRPDPGDLLAFANTAGYAM 457 >gi|25141365|ref|NP_740833.1| hypothetical protein F53F10.2 [Caenorhabditis elegans] gi|1943769|gb|AAB52428.1| Hypothetical protein F53F10.2a [Caenorhabditis elegans] Length = 477 Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 39/353 (11%), Positives = 94/353 (26%), Gaps = 35/353 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63 P++++D + L+ + V+ A+ C A + L+ +D S+ E+ Sbjct: 56 PFFVMDVAAIERRLEALRVMLPR--VRPNYAVACNADPVLARVLSNNIDVNFEVSNTAEL 113 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L + + F S+ +I L + Sbjct: 114 ELVSMNVEPSRAVFCSQLMTRKAIKNAVLAGCSTFVVESEKQVTDVMNASPEAEIILAVC 173 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S + E+ D NV G+ +++ Sbjct: 174 LPYSTGEVP----FGCSVDEIEEILDMAHLLGANVTGIYLELGLRATLEDYITSVHDARS 229 Query: 184 KE--FGHFITQIEWISLG-------GGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + + G ++ + + + + ++ G Sbjct: 230 IFETADQKFLTLRRVCFGNLSVPTGADGAVNNEFMSFCNSLNNVIDDLFESNIDFSASIG 289 Query: 235 EAIVTNTTTLNTTVLD-----------------ISENIKNLVIVDSSVEAHVPDYLLYQE 277 +VTN TL T V+ + + V S D + Sbjct: 290 RFLVTNAFTLCTNVIGKRAMDAKFITNDDFDDGVGFVYQTNDGVYGSFGCKQMDIKPLCK 349 Query: 278 SATIYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 + ++ + G + D+ + +++G+ + +E + + I Sbjct: 350 PLDVENDSEEQLHFGTILGPTLDGTDVAQRLMKSRQLRVGEWLVWEQMGAFTI 402 >gi|238898933|ref|YP_002924615.1| putative lysine/ornithine decarboxylase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466693|gb|ACQ68467.1| putative lysine/ornithine decarboxylase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 269 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 71/224 (31%), Gaps = 7/224 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P LI + L NNL + + A+K + + ++ + G SSLY Sbjct: 17 GSPLNLIWPENLHNNLTALRKALQQLHRHLIFYAVKVNKSQALPESAAKSGIGADVSSLY 76 Query: 62 EVMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ + + + + ++++ I ++ + + K + Sbjct: 77 EMRAARKSGIPYSKICASGPSKTSIFLTDLITHDACISIDSTEEFEEIKALIAHIQPAHQ 136 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-SEIKNVNGLMFHN-NCENKSFLCFSA 177 +R+ S ++ L + + G FH + K+ + Sbjct: 137 VRVLLRYRPSFLPISRFGMKSEDLSLCLDKLASLKKQCHFLGFHFHLSGYDCKTRIEAIR 196 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221 L + + + +++GGG+ LKE Sbjct: 197 ELHPMITRAQSLGIKAQIMNIGGGLPVQYV--DQHKSQAYLKEH 238 >gi|326331313|ref|ZP_08197605.1| Orn/DAP/Arg decarboxylase 2 [Nocardioidaceae bacterium Broad-1] gi|325950946|gb|EGD42994.1| Orn/DAP/Arg decarboxylase 2 [Nocardioidaceae bacterium Broad-1] Length = 457 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 49/417 (11%), Positives = 108/417 (25%), Gaps = 58/417 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P +++ Q + N + + + + A K A+ + G +S Sbjct: 33 GSPLHVVFPQVMAENAASLKAVLRRHAVPHDVFYAHKVNASTALVAEAAAAGLGVDVASS 92 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ F + I + S T + + +L++ A Sbjct: 93 AELDRALAAGFAPDWIEATGPKSPAFIQRIASLGVTTNADDLWELDRLAAAAPAGSTVPV 152 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC------------ 167 L + + + + + + G+ FH + Sbjct: 153 LLRLSGFASPLVPPSRFGIDLADADAALETVRRAPGLELRGVAFHLDTADPAARVDALTE 212 Query: 168 ------------------------------ENKSFLCFSAMLKNIEKEFGHFITQI--EW 195 + + F ++ L E + Sbjct: 213 SMAVVSAAYRKGLRPSVVDIGGGFRQRFVEDPEPFQRYAQALAAGPGELVWPGHDVVAPA 272 Query: 196 ISLGGGIHFTDKDYPVKDFCQR----LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 G + + + E + +++EPG+A+V + VL Sbjct: 273 AHKYGNHRPMTEVLDRFLAAEIERRPVAEVLRECMFTLWIEPGKALVDHAGITLAEVLYR 332 Query: 252 SENIKNLVIVDSSVEAHVPDY-LLYQESATIYPNTGPYT---AMVCGRSCLAGDIFGEFH 307 ++V V + G + GR CL D+ Sbjct: 333 KRAAGRELVVLDLSRNQVTPADQEVLLDPVLVDGHGDPPDGGVFLGGRLCLESDLISRRK 392 Query: 308 --FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAIREFSYND 361 + + GD ++F + A Y ++ + G P +DG ++ D Sbjct: 393 VFLDAEPRSGDVLAFVNTAAYQMDLSASAAAGHAPPPKVAAVLDGDRFTFTADTFAD 449 >gi|170049415|ref|XP_001855922.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167871261|gb|EDS34644.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 304 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 ++ + G +C + D+ + ++IGD + F+D+ Y FNG P + V Sbjct: 224 FSTTLWGPTCDSTDLILSGMAMEELQIGDFLVFDDMGAYGTVLATSFNGFAKPKVMVY 281 >gi|91773808|ref|YP_566500.1| Orn/DAP/Arg decarboxylase 2 [Methanococcoides burtonii DSM 6242] gi|91712823|gb|ABE52750.1| Diaminopimelate decarboxylase [Methanococcoides burtonii DSM 6242] Length = 349 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 105/345 (30%), Gaps = 24/345 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGT-TSSSL 60 I P + + K+ +L + + + K + + DG + Sbjct: 5 IPAPRFTLSKKIILEQYHKVKDVADI----VAFSSKTNP--KVSPLIEAETDGLLSVHMP 58 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ H + A+ I + + L+ KI Sbjct: 59 NELK--HTEDMSRVLFLAQAWTPEMIRELYEKGIRSFAVDNEFDLDTLLSTVDDTDWKIT 116 Query: 120 LRINP---SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 L + S + ++ ++ G+ FH +N + Sbjct: 117 LLLRLKLKEHSIRTERYFVFGMSSDTINKRIAQLKGNKNIEKLGVHFHRKTQNVNEWKIQ 176 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQIY 230 +++ + I+ +++GGG+ + + L+E+ + +++ Sbjct: 177 PEIEDALT--EGTLEAIDILNIGGGLPSEYANTNVDVINGIFRRISELREWLHEKEIKLM 234 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290 +EPG I L + + + +N + + + + N Sbjct: 235 IEPGRFISAPAGKLVSHITGVYDNNIIVNASVYNSDMDAILVPVKLRIEGEVGNDSGEPY 294 Query: 291 MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWF 334 +V G + + D+F + K KIGD + F + YN + F Sbjct: 295 VVKGCTPCSMDLFRYRVYLKDEPKIGDELVFINAGAYNF--WSNF 337 >gi|32471477|ref|NP_864470.1| diaminopimelate decarboxylase [Rhodopirellula baltica SH 1] gi|32443318|emb|CAD72149.1| hypothetical 49.9 kDa protein Y4YA-putative diaminopimelate decarboxylase [Rhodopirellula baltica SH 1] Length = 489 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 47/411 (11%), Positives = 105/411 (25%), Gaps = 85/411 (20%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ + +N+ + A V ++ A K T G +S Sbjct: 61 GSPVNVLSTDPMRSNIKDLQNVASQASVPLQIHFARKANKCAEFVRTGLMESIGFDVASE 120 Query: 61 YE--------VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-- 110 +E L F I + + + ++ + +L ++ Sbjct: 121 FEKQQTLDELYRLPQHPFDSPIVCTAAVKPVSLIRSCVLSNIVLVIDNEDELTTLRETLA 180 Query: 111 ---AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + +I R+ + + + P + L + + V G+ FH + Sbjct: 181 HLGSTAPKARIAFRLQHCSAKFPDLPSRFGMPANELTLLARSLCDEPRIQVVGIHFHVHR 240 Query: 168 ENKSFLCF-----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------------- 206 ++ F ++ + W+ +GGG Sbjct: 241 SDEQFSPSFTKALIDDALDVVDRVREIGHAVAWLDIGGGFPVNYLCHQKHWQRFLKEAHT 300 Query: 207 -------------------------KDYPVKDFCQRLK--------EFSEKYSVQIYLEP 233 + + L+ + + + EP Sbjct: 301 FTESSGRFEANRKLTWNQRPLKDIDPTWQPMNAADWLRAVLTSSLAYEINRRELILKCEP 360 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLV----IVDSSVEAHVPDYLLYQES----------A 279 G A++ VL + + +++SS D L Sbjct: 361 GRALLDGCGLTIAEVLFVKRDQNQNHLIGLMMNSSQCRTTRDDFLVDPIVISASNESAKP 420 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFG--EFHFEKPVKIGDRISFEDVAGYNI 328 T + G C + F F + + GD + + A Y + Sbjct: 421 TNQTDHAEIEGYFVGGYCTESEYLMQRRFRFPRGISRGDFVLIPNTAAYQM 471 >gi|90085118|dbj|BAE91300.1| unnamed protein product [Macaca fascicularis] Length = 358 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 91/323 (28%), Gaps = 31/323 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ + +K +KC +A + + L G SS E+ L Sbjct: 35 FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCSSAPAVLEILAALGTGFACSSKNEMAL 92 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E Y K + I +++ K + K+ L I Sbjct: 93 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 152 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + + + + + G+ FH + K + L + Sbjct: 153 EDNIGGEEGNMKFGTTLKNCKHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 212 Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238 F G + + +GGG + V L F E V+I EPG V Sbjct: 213 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 272 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277 ++ TL ++ + +Y Sbjct: 273 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 332 Query: 278 -SATIYPNTGPYTAMVCGRSCLA 299 + +T+ + G SC Sbjct: 333 VHKKYKEDEPLFTSSLWGPSCDE 355 >gi|121602208|ref|YP_989054.1| putative microcin immunity protein [Bartonella bacilliformis KC583] gi|120614385|gb|ABM44986.1| putative microcin immunity protein [Bartonella bacilliformis KC583] Length = 586 Score = 77.9 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 47/388 (12%), Positives = 117/388 (30%), Gaps = 37/388 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P++L D L T + K + +A+K + L + S E Sbjct: 27 PFFLFDADNALAKAKTLISASKKYFTDSNIAVAIKSCSLGIFCKLLAEEGLNAKVCSADE 86 Query: 63 VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + F + ++ L I ++VS+L K A +++ G+ Sbjct: 87 FQIALFAGFPNDRIILGGPLKTSEDLSFALEKDALIYVDSVSELRKLNTLAVNKNRRYGV 146 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNNCENKSF 172 I S N +SR G ++ I + + G + +++ Sbjct: 147 GIRLSH-------FYRNGKYSRFGITKEEYINDILPILSNTDHLYLQGFHLYVGSNPENY 199 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKY----- 225 + L + + + + + ++Y + + + + Y Sbjct: 200 PKITDTLHHWLPFLVEHMPSSGHLDISTDFLTNPEPENYDPETIFRSIHDVLNSYDPNLS 259 Query: 226 -SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 ++ E + +++ + L + +I + + + S T+ + Sbjct: 260 KRWKLIFELDHYLNKDSSYVIGKALGYKNHYDAKIIQTNLSINWITSIHNWHHSLTLLND 319 Query: 285 TGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 + + G +C D + + G + YN+ N + P Sbjct: 320 GDKDSTQDKQILAGFNCFEDDSLSPQGYY-GLTEGQHFLIRSCSNYNMQASNEW-TRKKP 377 Query: 341 TIAVKNVDGTIKAIR---EFSYNDYYNN 365 + + G++ + F+ D ++ Sbjct: 378 PVYIWLR-GSVLIAKISSSFTSRDLFHK 404 >gi|109495997|ref|XP_001074661.1| PREDICTED: ornithine decarboxylase 1 [Rattus norvegicus] gi|293341208|ref|XP_002724847.1| PREDICTED: ornithine decarboxylase-like [Rattus norvegicus] Length = 186 Score = 77.9 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 47/140 (33%), Gaps = 2/140 (1%) Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE- 277 KE Y + AI+ + + + V S + D+ + Sbjct: 5 KEKLAAYQLPSPFACIPAILDTGSDDEEESNEQTLMYYVNDGVYGSFNCILYDHAHVKAL 64 Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336 P+ Y++ + +C D E + +GD + FE++ Y + + FNG Sbjct: 65 LQKRPKPDEKYYSSSIWRPTCDGLDRIVERCSLPEMHVGDWMLFENMGAYTVAAASTFNG 124 Query: 337 INMPTIAVKNVDGTIKAIRE 356 P I + +++ Sbjct: 125 FQRPNIYYVMSRSMWQLMKQ 144 >gi|46204601|ref|ZP_00049755.2| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 201 Score = 77.9 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 37/139 (26%), Gaps = 10/139 (7%) Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY---------LLYQES 278 ++ LEP + VL + E+ + ++ H + + Sbjct: 61 RLVLEPVRYLAGPAGLYLARVLAVKESRGSRFVITDGGMHHHLAASGNLGQIVKRDFPLA 120 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGI 337 A + + V G C D+ P+ GD ++ Y + F Sbjct: 121 AVVDAGSECTATAVVGPLCTPLDMLARAAPLPPLAEGDLVAVLQSGAYGLTASPTGFLSH 180 Query: 338 NMPTIAVKNVDGTIKAIRE 356 MP + Sbjct: 181 PMPAELLVEGGEAELIRAR 199 >gi|326435760|gb|EGD81330.1| ornithine decarboxylase [Salpingoeca sp. ATCC 50818] Length = 344 Score = 77.5 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 23/57 (40%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344 + + V G +C + D + +GD + F+++ Y + FNG + Sbjct: 216 HESSVWGPTCDSIDCVQASTMLPELDVGDWLVFDNMGAYTSCAASTFNGFALTKHVY 272 >gi|38347503|emb|CAE02414.2| OSJNBa0095E20.1 [Oryza sativa Japonica Group] Length = 301 Score = 77.5 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 47/163 (28%), Gaps = 15/163 (9%) Query: 195 WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE--------PGEAIVTNTTTLNT 246 ++ Y ++ ++K + + ++ PG TL Sbjct: 131 HVAFAAEAGVNVTTYDSEEEVAKVKRCHPSCELLLRIKAPDCGGVKPGRYFAETAFTLAA 190 Query: 247 TVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA--MVCGRSCLA 299 V+ S+ + D + + G T V G +C + Sbjct: 191 RVIGKRRRGDVREYWIDDGVYGSLNCILLDSYVPRPRPLAGARPGEETHASTVFGPTCDS 250 Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 D + + + D + F+D+ Y + FNG I Sbjct: 251 IDTVVTGYQLPEMSVDDWLVFDDMGAYTTAAGSSFNGFATSAI 293 Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 5/155 (3%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++++D K+++ GV+ A+KC + L G +S E+ Sbjct: 52 FHVLDLAKVVDLYAGWRRAL--PGVRPFYAVKCNPDTALLGALAALGAGFDCASRAEIEA 109 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 Y K A + + T + + L Sbjct: 110 VLALGVPPAAIVYANPCKPGAHVAFAAEAG-VNVTTYDSEEEVAKVKRCHPSCELLLRIK 168 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN 159 + + + + + +V Sbjct: 169 APD-CGGVKPGRYFAETAFTLAARVIGKRRRGDVR 202 >gi|289606991|emb|CBI60923.1| unnamed protein product [Sordaria macrospora] Length = 290 Score = 77.5 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 31/264 (11%), Positives = 66/264 (25%), Gaps = 15/264 (5%) Query: 87 DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEK 146 T +++ +L K S F + Sbjct: 13 AYFEHGVRTFSLDSMDELEKIVAATDGATDLTLCVRMRVSSEY--AKLSLGSKFGVGPGE 70 Query: 147 CKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHF 204 K + + + + G+ FH + S +S ++ + ++ I +GGG Sbjct: 71 AKQLLIATRQVADALGICFHVGSQTMSPDAYSNAMERVRGAIVDAGVTVDVIDVGGGFPS 130 Query: 205 TDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT----VLDISENIKNLVI 260 + + + E +L V+ + + + Sbjct: 131 RYPGMTPPPLERFFETIHRAFESLPVSYSAELWAEPGRSLCAEYASVVVRVEHRRGSELF 190 Query: 261 VDSSVEAHVPDYLLYQESATIYPNTGPYT------AMVCGRSCLAGDIF-GEFHFEKPVK 313 ++ + D + P + G +C D G F + Sbjct: 191 INDGAYGSLFDAAHIGWKYPVQLLRQPESDARDMDFSFWGPTCDDIDQMQGPFPLPADTR 250 Query: 314 IGDRISFEDVAGYNINRKNWFNGI 337 GD + Y + FNG Sbjct: 251 SGDYFEIGMLGAYGSAMRTAFNGF 274 >gi|150389435|ref|YP_001319484.1| Orn/DAP/Arg decarboxylase 2 [Alkaliphilus metalliredigens QYMF] gi|149949297|gb|ABR47825.1| Orn/DAP/Arg decarboxylase 2 [Alkaliphilus metalliredigens QYMF] Length = 482 Score = 77.1 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 81/272 (29%), Gaps = 16/272 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + +P +I +++ N++ + V K+ A K + + + +S Sbjct: 29 LGSPLNIIFPEEINQNIEEFKEVFNKHFVSGKVFYAHKTNKSNSIVRQASFEAVNIDVAS 88 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116 E+ + F G+ I L + + + +L++ + A Sbjct: 89 ENELKSALKNGFTGDRIEATGPKNRNFITLGLQHNIIFNIDNLQELDQVMELKKAIDFQN 148 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENK 170 ++I S K S+ G +K+ ++++ F + + Sbjct: 149 TKKVKILLRFSGFKSESIKVLSKNSKFGIPASGIYQALEKLSQYREDIHFWGFSFHVDTI 208 Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYP--VKDFCQRLKEFSEKY 225 ++N F + + +GGG + + D LKE Y Sbjct: 209 DLKEKVIAIENCIDFFDIARDHDFEPRVLDIGGGFKVSYIEDAKEWNDSISYLKESILGY 268 Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 + + + L+I N Sbjct: 269 QEGVTWNNQTFGIQQEKGVLKGTLNIYNYHDN 300 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 38/342 (11%), Positives = 85/342 (24%), Gaps = 46/342 (13%) Query: 16 NNLDTALYIRKNAGVKLLLALKC--FAAWGMFDTLNQYMDGTTSSSLYEV-MLGHEKFGG 72 +NL + + K F L + G S S+ + Sbjct: 129 DNLQELDQVMELK--------KAIDFQNTKKVKILLR-FSGFKSESIKVLSKNSKFGIPA 179 Query: 73 ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK-------FKDKAQKLHKKIGLRINPS 125 + + + + +T+ K R+ Sbjct: 180 SGIYQALEKLSQYREDIHFWGFSFHVDTIDLKEKVIAIENCIDFFDIARDHDFEPRVLDI 239 Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185 K + + ++ K+ I + V + + L Sbjct: 240 GGGFKVSYIEDAKEWNDSISYLKESILGYQEGVTWNNQTFGIQQEK-GVLKGTLNIYNYH 298 Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN 245 + L + + + + + + +++EPG+A+V Sbjct: 299 DNLTGPKYLDALLSTRLPKFEN--------RTIGTILSENMIDLFIEPGKALVNQLGLSA 350 Query: 246 TTVLDISENIK----------NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295 V I ++ +V E + ++ + + G Sbjct: 351 AKVNFIKQSSDDEILIGLDLKRTDVVMGDQELFIDPIII--HRSKVTDLQEDKGVYFIGN 408 Query: 296 SCLAGDIFGEFHFE--KPVKIGDRISFEDVAGYNINRKNWFN 335 CL D+ + + GD + F + AGY + FN Sbjct: 409 LCLESDLIFKHKIFINQLPANGDIVIFPNTAGYFM----DFN 446 >gi|297738879|emb|CBI28124.3| unnamed protein product [Vitis vinifera] Length = 370 Score = 77.1 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 59/175 (33%), Gaps = 9/175 (5%) Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 ++ K + I + D R+K +++ ++I EPG Sbjct: 185 CKGESHLKYAASVGVNLTTFDSMQEIDKIIMWHKKCDLLLRIKAPNDEKDLKIMAEPGRF 244 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI---------YPNTGP 287 TL + ++ + + Y +S+ + + N Sbjct: 245 FAETAFTLVSNIIGKRVRGEKREYWIDDGIYGSFNLPAYDKSSMMVKPLLGGSEWMNKAK 304 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 +++ V G +C + D+ + + D + F ++ Y + FNG ++ +I Sbjct: 305 FSSTVFGPTCDSMDMVVAESQLPELHMNDVLVFYNMGAYTASAGTRFNGFDISSI 359 Score = 74.8 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 41/141 (29%), Gaps = 7/141 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D ++ +D V A+KC + L +S E+ Sbjct: 110 PFYILDLGAVVRLMDMWKQAL--PNVVPYYAVKCNCQPPLITALASLGANFDCASRAEIE 167 Query: 65 LGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 G + Y + A + F+++ +++K + LR Sbjct: 168 TVMALGVGAQQIVYANPCKGESHLKYAASVGVNLTTFDSMQEIDKI--IMWHKKCDLLLR 225 Query: 122 INPSVSYSKFILADPNRPFSR 142 I + F Sbjct: 226 IKAPNDEKDLKIMAEPGRFFA 246 >gi|218296856|ref|ZP_03497551.1| diaminopimelate decarboxylase [Thermus aquaticus Y51MC23] gi|218242736|gb|EED09271.1| diaminopimelate decarboxylase [Thermus aquaticus Y51MC23] Length = 133 Score = 77.1 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 5/97 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP+Y D + + + ALK G+ G + SL E Sbjct: 18 PTPFYAYDWTAIKKRAEAFREAFPL--ARPFFALKANPRLGLLR--RPMGYGAEAVSLGE 73 Query: 63 VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIF 98 V+ F E +N K E L + ++ Sbjct: 74 VLRAYRAGFSPEEVVWNGPVKTPEALEALRGREPLVV 110 >gi|221103505|ref|XP_002159193.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 166 Score = 77.1 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 41/127 (32%), Gaps = 13/127 (10%) Query: 232 EPGEAIVTNTTTLNTTVLDIS-----------ENIKNLVIVDSSVEAHVPDYLLY-QESA 279 EPG V + TL V I V S + D+ + Sbjct: 2 EPGRYFVASAFTLTCNVTSIREVSTNKNSPPGFMYYLNDGVYGSFNCILFDHQSPTPLTL 61 Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339 + Y + G +C + D + + + IGD + FE++ Y I FNG Sbjct: 62 HETDHCPRYKCSLWGPTCDSMDCISKDSYLPKLMIGDWLYFENMGAYTIAPSIKFNGF-K 120 Query: 340 PTIAVKN 346 P + Sbjct: 121 PPVVFYM 127 >gi|29832159|ref|NP_826793.1| amino acid decarboxylase [Streptomyces avermitilis MA-4680] gi|29609277|dbj|BAC73328.1| putative amino acid decarboxylase [Streptomyces avermitilis MA-4680] Length = 457 Score = 76.7 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 53/410 (12%), Positives = 110/410 (26%), Gaps = 63/410 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P++ + NL + GV + A K A + G +S E Sbjct: 39 PFHFLLPDAFDANLRALHSVLDETGVDGFVYFAKKANKAAVWAERSAAGGAGVDVASAAE 98 Query: 63 VMLGHEKFGGETH--AYNVAYKDCEIDAVLSNCDTIIFNTVSQLN-KFKDKAQKLHKKIG 119 + H A + + + I + + +L+ + + Sbjct: 99 LRQALGHGVRGEHLVVTGPAKDLALLGLAVRHGALIAVDALDELDTLITTVSGDRTRPAR 158 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN-NCENKSFLCFSAM 178 L + L + + E + G FH + K + Sbjct: 159 LLLRCLPPAQPHSRFGLGEAEVALALE-RCVTAGEAVRMEGFSFHLSGYDVKLRADLAGH 217 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK---------------------------DYPV 211 L + + + + IS+GGG+ + YP Sbjct: 218 LVELCLKARVLGLEADRISIGGGLPVSYSSAADWNTFLTRQNGGHYHADRTFDPDGFYPY 277 Query: 212 KDFCQ------------------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 L + + LEPG A++ V + + Sbjct: 278 HSPVAGADALRRILATRPEGHRPSLAALLNDAGITLLLEPGRALLDRAGGTVFRVQGVKD 337 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQES--------ATIYPNTGPYTAMVCGRSCLAGDIFGE 305 ++ + + + E A + A V +CL D+ Sbjct: 338 RDGYQLLTVNGTSLSLSEQWFNSEYLPDPHLLSAHPDTPDAVWPAAVGAATCLESDMLTW 397 Query: 306 FH--FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTIK 352 F + + GD + + + AGY ++ + F+ + +P V + + Sbjct: 398 RKVPFPRRPRTGDLLVYPNTAGYQMDSNESPFHDLALPPKVVIDHTDRAR 447 >gi|294636689|ref|ZP_06715037.1| pyridoxal-dependent decarboxylase [Edwardsiella tarda ATCC 23685] gi|291090098|gb|EFE22659.1| pyridoxal-dependent decarboxylase [Edwardsiella tarda ATCC 23685] Length = 143 Score = 76.3 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 5/126 (3%) Query: 4 TPY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P+ YL D L + + G +L A K A + TL ++DG ++S Sbjct: 17 SPFCAYLYDLTALRERIADMKHRLP-IGCELFYAAKANAEAPILRTLAPWVDGFEAASGG 75 Query: 62 EVM-LGHEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ L + + A D + ++S+L + A++ + + Sbjct: 76 ELAWLAQQSLDSKLLFGGPGKLTSELALACELKVDALHVESLSELQRLAMLAEQRRQVLP 135 Query: 120 LRINPS 125 L + + Sbjct: 136 LLLRMN 141 >gi|47216265|emb|CAG05961.1| unnamed protein product [Tetraodon nigroviridis] Length = 282 Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 27/192 (14%) Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPGEAIVTNTTTL 244 Q+ + +GGG+ D ++ + E ++Y QI EPG V + TL Sbjct: 90 GFQLSVLDIGGGLPGKDIPVTFQECSDVINEALDEYFPLDGGVQIIAEPGRYYVESIFTL 149 Query: 245 NTTVLDIS--ENIKNLVIVDSSVEAHV------------------PDYLLYQESATIYPN 284 V+ + S E + PDY+ + Sbjct: 150 AANVIAKRAVMDDVTKDEGRESTERLMMYYLNEGVYGSLNWLLTDPDYIEIKPYLHGAEE 209 Query: 285 TGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + + G +C D + + +++GD E + Y+I+ + +NG I Sbjct: 210 SREQRYRSVIWGPTCDCVDKIIDNYMIPDLRVGDWFLIEKIGAYSISSRTDYNGFEKAHI 269 Query: 343 AVKNVDGTIKAI 354 + T + + Sbjct: 270 YFAVTNETWRTL 281 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 P++++D L+ ++ VK A+KC + + TL+ G +S Sbjct: 33 PFFVVDLDTLVQ--KHLKWLSNLPRVKPFYAVKCNSTPTVLKTLSALGTGFDCASKN 87 >gi|218678018|ref|ZP_03525915.1| diaminopimelate decarboxylase protein [Rhizobium etli CIAT 894] Length = 94 Score = 75.9 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 3/83 (3%) Query: 32 LLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAYNVAYKDCEID--A 88 + A+K + + TL + G S E+ E ++ K + A Sbjct: 2 VCYAMKANSNQAVLKTLGRLGAGIDVVSEGELRRALAAGIPAERIMFSGVGKTPQEMDFA 61 Query: 89 VLSNCDTIIFNTVSQLNKFKDKA 111 + + + +L +A Sbjct: 62 LEAGIYCFNVESEPELEILNQRA 84 >gi|83944546|ref|ZP_00956997.1| probable diaminopimelate decarboxylase [Sulfitobacter sp. EE-36] gi|83844583|gb|EAP82469.1| probable diaminopimelate decarboxylase [Sulfitobacter sp. EE-36] Length = 475 Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 56/423 (13%), Positives = 104/423 (24%), Gaps = 80/423 (18%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P + N+ + G + A K G ++S E Sbjct: 45 PLNIQSVDPFRRNIAQLTDCVTDYGLPFLPMFARKANKCLSYVQAARDMGIGIDTASHAE 104 Query: 63 VMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--I 118 V E G+ A + + T+I + +L +D A+ K + Sbjct: 105 VEQCLEQGLPGDRIVCTAAVKDRALMTLCVGGGVTVILDNEDELELLEDVAEGATKPVSV 164 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 GLR+N + + P +++ SE ++GL FH N + + + Sbjct: 165 GLRLNGFERDGTKLYSRFGFPLTQVPTLAARIAASETLRLDGLHFHLNGYSAEDRIAAIL 224 Query: 179 LKNIEKEFGHFITQIEWI-SLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLE-- 232 + + +GGGI + + Sbjct: 225 QTLPLIHKIKGDSTAPFFLDIGGGIPMNYLDDAAEWETWLAELDRALIGDRDPITQHNDG 284 Query: 233 PGEAIVTNTTTLNTTVLDISENIKN------LVIVDSSVEAHVPDYL------------- 273 G + + V + +V AH+ D Sbjct: 285 LGRKVGGEGKVDSYPVAQTLVQEDWMRRILDHMADGQTVAAHLRDAHISLRCEPGRSLLD 344 Query: 274 ------------------------------------LYQESATIYPNTGPYTAMVCGRS- 296 + + P GP + G Sbjct: 345 GCGMTLARVAFCKRDSAGTPVIGVQMNRTQSRSGFAEFALDPLMVPAPGPRKGPIEGYLA 404 Query: 297 ---CLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNI----NRKNWFNGINMPTIAVKNV 347 C + + F + VK GD + F + AGY + +R + F + Sbjct: 405 GTYCTESEWLTRRKMSFPQGVKAGDLMVFPNTAGYLMHFLESRSHQF---PLARNVFVTE 461 Query: 348 DGT 350 Sbjct: 462 GNA 464 >gi|333015578|gb|EGK34917.1| diaminopimelate decarboxylase domain protein [Shigella flexneri K-227] Length = 176 Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 40/141 (28%), Gaps = 13/141 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFEV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLECVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRP 139 LR+NP + P Sbjct: 140 WLRVNPGFGHGHSQKPIPVAK 160 >gi|296393202|ref|YP_003658086.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] gi|296180349|gb|ADG97255.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] Length = 457 Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 55/423 (13%), Positives = 108/423 (25%), Gaps = 77/423 (18%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 ++L+ Q NL + G + A K A + G ++S+ E+ Sbjct: 43 FHLLHPQTFAANLGAFQAVSARTGGTVYFAKKANKAAAWLTVCAERGAGVDAASVPELRE 102 Query: 66 GHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 G+ A D + + +++ +L + A L Sbjct: 103 ALRCGVPGQRVVVTGPAKSDELLLLACRAGALVAIDSLDELERAVALADGEAALRVLFRV 162 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + + + G FH + I Sbjct: 163 HPPRQPNSRFGMAVPERQAALVRIGQFRGRIV--LEGFSFHL-SGYDIASRAELAGELIA 219 Query: 184 KEF--GHFITQIEWISLGGGIHFTD----------------------------------- 206 + + + IS+GGG Sbjct: 220 ECLAARARGHRADTISIGGGFPVRYVEAEDWARFQSEFRPEQCHARKTFSDGFYPYHCDE 279 Query: 207 -------KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259 K + L++ + + +EPG A++ + V Sbjct: 280 PGARALEKILAHQADGAALEQRLAAAGIALSVEPGRALLADAGISVFPVQGFKWREAAPN 339 Query: 260 IVDSSV------------------EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 +PD L+ + V G SCL D Sbjct: 340 EHAGGYGIATVAGTSLSLSEQWFGSEFLPDPALWPTTQHRQIT----PTCVGGASCLDSD 395 Query: 302 IFGEFH--FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAIREFS 358 + +P K GD + + + AGY ++ + F+ + +P AV + G +S Sbjct: 396 MLTWRKVPLPRPPKRGDFLIYPNTAGYQMDSNESSFHDLPIPPKAVVDFSGAEP---RWS 452 Query: 359 YND 361 + + Sbjct: 453 FEE 455 >gi|315226160|ref|ZP_07867948.1| conserved hypothetical protein [Parascardovia denticolens DSM 10105] gi|315120292|gb|EFT83424.1| conserved hypothetical protein [Parascardovia denticolens DSM 10105] Length = 258 Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 83/252 (32%), Gaps = 21/252 (8%) Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 F E+ ++ ++S+ V L FH S + ++ Sbjct: 9 DEGTFGKNSRFGIDP-FNEQLREYLKSQKLIVKRLHFHTG--QLSPERLLYEFEYCKRII 65 Query: 187 GHFITQIEWISLGGGIHFTDKDYPV----KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 + I I GGG + + + + E ++Q EPG ++ Sbjct: 66 AEY-PTITTIDFGGGFYTFFAHRDRAEKVFSYIRTINEIKYANNLQFRFEPGAGLIGPFG 124 Query: 243 TLNTTVLDISENIKNLVIVDSSVEA---HVPDYLLYQESATI--YPNTGPYTAMVCGRSC 297 L TTV+ + + ++ ++ +++ + +T + A+VCG S Sbjct: 125 YLVTTVVSLEHGNRYFGDDLIGLDCSAWNICPWVIPKVYHYQEARRDTEYHQAIVCGNSL 184 Query: 298 LAGDIFGEFHF--------EKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349 D FG+ +++GD+I +V Y FN + P + + Sbjct: 185 YENDFFGKSQENRVPRLLVPDDLRVGDKIIITNVGAYTYTNFRNFNLLGRPEKYGYDSEE 244 Query: 350 TIKAIREFSYND 361 R F D Sbjct: 245 GKDIQRVFGMKD 256 >gi|196016994|ref|XP_002118345.1| hypothetical protein TRIADDRAFT_62375 [Trichoplax adhaerens] gi|190579061|gb|EDV19167.1| hypothetical protein TRIADDRAFT_62375 [Trichoplax adhaerens] Length = 176 Score = 75.2 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 37/105 (35%) Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +++D+ V + D+ L G TA++ G++C + Sbjct: 50 VQYQLRSMMDMKVLYYVNDSVYGCLNILPIDHALITLKPVKSNTHGEETAVLFGQTCDSL 109 Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 D + + GD + FE+ Y+++ + FN P Sbjct: 110 DCLMKECLLPKLNAGDWVYFEETGAYSLSLVSKFNSFKKPKCYYY 154 >gi|312972941|ref|ZP_07787114.1| diaminopimelate decarboxylase domain protein [Escherichia coli 1827-70] gi|310332883|gb|EFQ00097.1| diaminopimelate decarboxylase domain protein [Escherichia coli 1827-70] Length = 176 Score = 75.2 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 40/141 (28%), Gaps = 13/141 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D Q + + + A K + + + + S SL E+ Sbjct: 27 PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D +S + +V L++ + ++ Sbjct: 82 RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139 Query: 119 GLRINPSVSYSKFILADPNRP 139 LR+NP + P Sbjct: 140 WLRVNPGFGHGHSQKPIPVAK 160 >gi|149280425|ref|ZP_01886545.1| arginine decarboxylase, biosynthetic [Pedobacter sp. BAL39] gi|255532214|ref|YP_003092586.1| Orn/DAP/Arg decarboxylase 2 [Pedobacter heparinus DSM 2366] gi|149228839|gb|EDM34238.1| arginine decarboxylase, biosynthetic [Pedobacter sp. BAL39] gi|255345198|gb|ACU04524.1| Orn/DAP/Arg decarboxylase 2 [Pedobacter heparinus DSM 2366] Length = 463 Score = 75.2 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 53/394 (13%), Positives = 115/394 (29%), Gaps = 61/394 (15%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY-----EVMLG 66 + NN K K + + + +SS + E + Sbjct: 66 AIIKNNYR--------GDYKYCYCTKSSHFRHIVEEALKNGIHLETSSAFDMPMIEALEK 117 Query: 67 HEKFGGETHAYNVAYKDCEIDAVLSNCDT-------IIFNTVSQLNKFKDKAQKLHKKIG 119 + +K + + + + + + N F D+ ++ Sbjct: 118 KGALTKDITVICNGFKTYQYKQYIIDMLHDGYKNIIPVLDNKEEFNLFDDEV-EMDTPCN 176 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGLMFHNNCENKSFLCF 175 L I + +R R+ + + V L F N + Sbjct: 177 LGIRIAAEEQPDSQFYTSRLGVRMEDVIDFYNNKISANPNFRVKLLHFFINSGITDSPYY 236 Query: 176 SAMLKNI---EKEFGHFITQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKY 225 L+ +F +++ + +GGG+ F D +Y V + +R+KE ++ Sbjct: 237 WNELEKYVTLYCKFKKINPELDTLDIGGGMPFKDSLVFDFDYEYMVNEIVKRIKEICAEH 296 Query: 226 S---VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLL----YQ 276 I E G+ V + + VL + +++D S ++PD Y Sbjct: 297 DVVEPDIITEFGKYTVAEASGILYKVLGRKQQNDREKWLMLDGSFITNLPDVWALNQKYI 356 Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEF-----HFEKPVKIGDRISFEDVAGYNINRK 331 + + G +C D + + F + + F + Y Sbjct: 357 LLPINNWDAEYERVNLGGITCDGQDYYNQEAHMNSVFMPKTRKVQYLGFFNTGAYQEVL- 415 Query: 332 NWFNGI-----NMPTIAVKNVDGTIKAIREFSYN 360 + + GI P + + R+ ++N Sbjct: 416 SGYGGIHHCLLPSPKHVIIRRN------RDETFN 443 >gi|82541743|ref|XP_725091.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase-related [Plasmodium yoelii yoelii str. 17XNL] gi|23479966|gb|EAA16656.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase-related [Plasmodium yoelii yoelii] Length = 1404 Score = 75.2 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 98/314 (31%), Gaps = 19/314 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I T + I+ QK+L V A+K + L +S+ Sbjct: 852 IDTSVFCINLQKILLQYIRFKRNLPR--VTPFYAVKSNDDEVVLKFLYGLNCSFDCASIG 909 Query: 62 E---VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKK 117 E ++ + Y K + I T +++ K Sbjct: 910 EINKLITLLPDISTDRIIYANTIKSPASLKYAKEKN-INLCTFDNIDELKKICKYHPTCS 968 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + LRIN K ++ EK + N+ G+ FH K+ F Sbjct: 969 LLLRINIDFKNYKSYMSSKYGANEFEWEKILKFGKENNMNIIGVSFHVGSNTKNIFDFCQ 1028 Query: 178 MLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 +K + F + +++GGG YP + K+ +K+ + E Sbjct: 1029 AIKLSREVFDISHRLGFKFRILNMGGG-------YPEELEYDFAKKNEKKHYCTLNEEEL 1081 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294 + + + +V+ + N N + ++ + D+ + + P MV Sbjct: 1082 KKYIMSFL-NEKSVIKKNYNFYNFEKIALAINMSI-DHYFKDMKDQLKIISEPGRYMVAS 1139 Query: 295 RSCLAGDIFGEFHF 308 S LA + G+ Sbjct: 1140 SSTLAAKVIGKRCP 1153 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 18/47 (38%) Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G+SC D+ + I D I +E Y + FNG Sbjct: 1340 NIFGQSCDGLDMITSSTYLPECNINDWIIYEYTGAYTFVSSSNFNGF 1386 >gi|187466287|emb|CAQ51903.1| arginine decarboxylase [Mus musculus] Length = 322 Score = 74.8 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 86/288 (29%), Gaps = 29/288 (10%) Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 K + + + +++ K K+ L I S+ Sbjct: 8 GVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIATQDSH 67 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186 S L+ + + + V G+ FH ++ + + F Sbjct: 68 SLNHLSLRFGASLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADARLVFQM 127 Query: 187 -GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + + LGGG + ++ F E V I E G VT Sbjct: 128 GEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEGCGVDILAELGRYYVT 187 Query: 240 NTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA--- 290 + T+ VLD + + S+ H+ + + ++ ++ NT P A Sbjct: 188 SAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYHLDEGVYGVFNSVLFDNTCPTPALQK 247 Query: 291 -----------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + G + D E + +++GD + F+++ Y Sbjct: 248 KPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 295 >gi|41350895|gb|AAH65772.1| Adc protein [Mus musculus] Length = 405 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 93/309 (30%), Gaps = 35/309 (11%) Query: 49 NQYMDGTTSSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF 107 + G L E+ L H K + + + +++ Sbjct: 74 REGGRG-----LAEMELVQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELA 128 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 K K+ L I S+S L+ + + + V G+ FH Sbjct: 129 KVVKSHPSAKMVLCIATQDSHSLNHLSLRFGASLKSCRHLLENAKKSHVEVVGVSFHIGS 188 Query: 168 ENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRL 218 ++ + + F + + LGGG + ++ Sbjct: 189 GCPDPQAYAQSIADARLVFQMGEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALD 248 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDY 272 F E V I E G VT+ T+ VLD + + S+ ++ + Sbjct: 249 LYFPEGCGVDILAELGRYYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYYLDEG 308 Query: 273 LLYQESATIYPNTGPYTA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 + ++ ++ NT P A + G + D E + +++GD + Sbjct: 309 VYGVFNSVLFDNTCPTPALQKKPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWL 368 Query: 319 SFEDVAGYN 327 F+++ Y Sbjct: 369 VFDNMGAYT 377 >gi|282866453|ref|ZP_06275497.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE] gi|282558665|gb|EFB64223.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE] Length = 507 Score = 74.4 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 52/430 (12%), Positives = 101/430 (23%), Gaps = 103/430 (23%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLN---QYMDGTT 56 + +P ++ + + N L + + + ++ A K + + L G Sbjct: 34 LGSPLNVLLPEVVAENAARFLSVYRRHRLSGRVYFAHKANRSSALVRRLAGCDPAAVGVD 93 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 +SL E+ F G+ + T+ ++ +L + + Sbjct: 94 VASLGELRHVLACGFTGDRVMATGPKDPQFLWLAARVGATVNVDSADELRELAGLVRGHG 153 Query: 116 KKI-----GLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVN----- 159 L S + + SR G + +E + V Sbjct: 154 LSRTRVLARLSGFESDAGYGGVGTRVLSRGSRFGTPVAEAETLWSALEEHMDAVELIGLA 213 Query: 160 -------------------------------------GLMFHNNCENKSFLCFSAMLKNI 182 G F ++ S Sbjct: 214 YHLDTTGLEEKARALERCVLLMDECRERGLTPGAVDIGGGFGVGYVAEAAEWESWTTALS 273 Query: 183 EKEFG------HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------------- 223 E G + GG + T YP + E Sbjct: 274 EAVLGVRSPLTWRGHGYGLRAEGGTVRGTAALYPAHRTVAGPRYLDELLSRPAPALGRSP 333 Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS--------------- 263 ++ +Y+EPG A+V VL++ Sbjct: 334 ATLLLEHLNDLYIEPGRALVDQCGVSLARVLEVRRTNDAPDRYLVRLGMNAGDVSLEEHG 393 Query: 264 ---SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRI 318 D P + G CL D+ + + + GD + Sbjct: 394 VLVDPVLLPRDGAPGGPDGDGAGGGRPVGVHLVGNLCLEADLITRRLVYLPRLPRAGDVL 453 Query: 319 SFEDVAGYNI 328 +F + AGY + Sbjct: 454 AFVNTAGYAM 463 >gi|156081893|ref|XP_001608439.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium vivax SaI-1] gi|148801010|gb|EDL42415.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase, putative [Plasmodium vivax] Length = 1442 Score = 74.4 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 64/230 (27%), Gaps = 10/230 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I T I+ QK+L V ++K + L +S+ Sbjct: 904 IDTSVVCINLQKILAQYIRFKKNL--PSVTPFYSVKSNNDDVVIKFLYGLNCNFDCASVG 961 Query: 62 EVML---GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKK 117 EV + E Y K N + I T + + + Sbjct: 962 EVKKLTTLLPELNRERIIYANTIKSINSLIFARN-EHINLCTFDNIEELRKILKYHPKCS 1020 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + LRIN K ++ E N+ G+ FH K+ + Sbjct: 1021 LLLRINVDFKNYKSYMSSKYGANEHEWENILSFGRKHNLNIVGVSFHVGSNTKNLFDYCQ 1080 Query: 178 MLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 +K + Q E ++LGGG + K ++ + Sbjct: 1081 AIKLSRDVWNISNKMGYQFEILNLGGGFPEELEYDSAKKNEKKKYCTLNE 1130 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 20/58 (34%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 Y A + G+SC D+ + I D I +E Y + FNG Sbjct: 1375 YLANIFGQSCDGLDMITSITYLPECYINDWIIYEYAGAYTFVSSSNFNGFKKCQKVYI 1432 >gi|152996852|ref|YP_001341687.1| arginine decarboxylase [Marinomonas sp. MWYL1] gi|150837776|gb|ABR71752.1| arginine decarboxylase [Marinomonas sp. MWYL1] Length = 634 Score = 74.0 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 93/312 (29%), Gaps = 36/312 (11%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLN---- 49 I P + L + ++ + A ++ +K + + + Sbjct: 55 IPYPCLVRFPNILHSRIEKITNSFQQAIDYYDYQAKYAIVYPIKVNQQRRVVEEIAACQP 114 Query: 50 --QYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCE------IDAVLSNCDTIIFNT 100 G + S E+M + YKD E + + + I+ Sbjct: 115 DNAATVGLEAGSKPELMAVLAMHKNADGIIVCNGYKDREFIHLALMAEKMGHQVFIVVEK 174 Query: 101 VSQLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI---- 155 + +L+ ++A K+ + + I S + S+ G + + Sbjct: 175 MHELDWILEEADKIGVQPRIGIRIRLASTCTTHWGNSGGEKSKFGLTTSQLLRAIDRLRE 234 Query: 156 ----KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD 208 + + FH + LK + + +++W+ +GGG+ + Sbjct: 235 LDLLHCLELIHFHLGSQITRIRDIQNSLKECARYYAELHQMGVKVKWVDVGGGLGVDYEG 294 Query: 209 YPVKDFCQR---LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265 ++ + E++ + + + + ++ + ++ + ++ S Sbjct: 295 TRCQNDFSANYSIGEYANNVVFAFHNVCEQYELPHPHLISESGRAVTAHHAMMIADVFSH 354 Query: 266 EAHVPDYLLYQE 277 A + E Sbjct: 355 GAELLPIEEPAE 366 >gi|260829309|ref|XP_002609604.1| hypothetical protein BRAFLDRAFT_125023 [Branchiostoma floridae] gi|229294966|gb|EEN65614.1| hypothetical protein BRAFLDRAFT_125023 [Branchiostoma floridae] Length = 151 Score = 74.0 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 5/108 (4%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++N ++ + V+ A+KC + + L G +S EV Sbjct: 41 FFVCDLGDVVNKYK--KWVSRLPRVEPFYAVKCNDSPHVLQVLANLGTGFDCASKTEVQT 98 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNC--DTIIFNTVSQLNKFKDK 110 + Y K D + F+ +L+K K+ Sbjct: 99 VLNLGVAPDRIVYANPCKQTSHIRYAKKNSVDLMTFDNEDELHKIKNY 146 >gi|86158319|ref|YP_465104.1| arginine decarboxylase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774830|gb|ABC81667.1| arginine decarboxylase [Anaeromyxobacter dehalogenans 2CP-C] Length = 654 Score = 74.0 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 34/275 (12%), Positives = 73/275 (26%), Gaps = 31/275 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMD--- 53 P + + L + A ++ + +K + D + Sbjct: 75 PCVVRFQDVLRARVKQINEAFGKAVAEMGYGASYFGVYPIKVNQMREVVDEIVDAGAPYH 134 Query: 54 -GTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 G + S E+++ E YKD E + + + + K + Sbjct: 135 YGLEAGSKGELLVVLGMNADPEALTICNGYKDEEYLRLALLGRKLGRKVIVVIEKLSELP 194 Query: 112 QKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKIES--------EIK 156 Q L + ++P V + F++ G + I++ + Sbjct: 195 QLLRLGEEMGVDPMVGLRSKLTTRGTGKWEGSSGDFAKFGLTVPELIQAVRILKEAGKEH 254 Query: 157 NVNGLMFHNNC---ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 L FH E + + + IE+ +GGG+ D Sbjct: 255 CAKLLHFHVGSQLTEIRVVKDAVNEGARVYAKLRKMGLPIEYFDVGGGLGVDYVGTRTND 314 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 F + ++Y + + V Sbjct: 315 FASSVNYSMDEYVGDVVYNVQRVCMNEGVPEPHLV 349 >gi|324497901|gb|ADY39599.1| putative ornithine decarboxylase-like [Hottentotta judaicus] Length = 165 Score = 74.0 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 41/136 (30%), Gaps = 5/136 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P++++D + + K + A+KC G+ L +S E+ Sbjct: 32 PFFIVDLTDIEHKYKLWK--LKMPRITPFYAMKCNDCPGVLQYLASMGVNFDCASKTEIE 89 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + Y K A + F+ +L K K I ++ Sbjct: 90 TVIKLGVDPSRIIYANPCKTRSFIKYAATVGVKMMTFDNEIELYKIKSIFPNAELIIRIK 149 Query: 122 INPSVSYSKFILADPN 137 ++ S S+ + Sbjct: 150 VDDSNSHFQTQFKIWM 165 >gi|297155652|gb|ADI05364.1| putative lysine/ornithine decarboxylase [Streptomyces bingchenggensis BCW-1] Length = 500 Score = 74.0 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 26/218 (11%), Positives = 66/218 (30%), Gaps = 15/218 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + +P ++ +L N++ + + + ++ LA K + + L G +S Sbjct: 32 LGSPLGVVLPDQLAENVERFRSVYRGHHLAGQIFLAHKANRSSALLRRLAATGAGVDVAS 91 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 L E+ F + T+ ++ ++L++ + H Sbjct: 92 LGELQHALGCGFAPSLITATGPKDTRFLWLAARTGATVSLDSPAELDQLATLV-RAHGLP 150 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNG--LMFHNNCE 168 +++ +S + SR G + ++ + G Sbjct: 151 RVQVLLRLSGFEGSGVKVLTRRSRFGTAVPELDAVLDTLERYADAVELTGVAYHLDTTSA 210 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD 206 + + L +E+ G + +GGG Sbjct: 211 AEKAVALEGCLLALEECRGR-GLAPRAVDIGGGFGVNY 247 Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 24/129 (18%) Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA----------HVPDYL 273 ++ ++ EPG A++ VL+ + + V + A + L Sbjct: 329 EHLYDLHTEPGRALLDQCGVTLARVLETRDVGSGPLWVRLAATAGDIGLEEHGILIDPVL 388 Query: 274 LYQES------------ATIYPNTGPYTAMVCGRSCLAGDIFGEFH--FEKPVKIGDRIS 319 L +E A GP + G CL D+ + GD ++ Sbjct: 389 LPREPREPGPTGEPGPPAGPGGPGGPVETYLFGSLCLESDLITRRTVHLPRRPAPGDLLA 448 Query: 320 FEDVAGYNI 328 F + AGY + Sbjct: 449 FVNTAGYCM 457 >gi|313677330|ref|YP_004055326.1| orn/dap/arg decarboxylase 2 [Marivirga tractuosa DSM 4126] gi|312944028|gb|ADR23218.1| Orn/DAP/Arg decarboxylase 2 [Marivirga tractuosa DSM 4126] Length = 462 Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 112/400 (28%), Gaps = 53/400 (13%) Query: 3 KTPYYLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDG 54 TP L K+ N++ K K K + + + Sbjct: 41 GTPLKLTYLPKISQNINQAREYFANAFKKLNYKGEYTYCYCTKSSHFSFVMEEALKAGVH 100 Query: 55 TTSSS---LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVS------QLN 105 +SS + V HEK Y V + I + LN Sbjct: 101 METSSSFDIPIVKKLHEKGLLTKQHYVVCNGFKRPLYRQYINELINDGFENVVPVLDDLN 160 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGL 161 + + + I + +R R + +SE + L Sbjct: 161 EIDSYEAEAKNPYKVGIRIASDEEPTFEFYTSRLGIRYNDVIDLYQNKIAKSEKAKLKML 220 Query: 162 MFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKD 208 F N K + + L E +++ I +GGG + Sbjct: 221 HFFINTGIKDTAYYWSELGRFIDKYCELKKIAPELDTIDIGGGFPIKTSLGFEYDYQYMV 280 Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVE 266 + + Q + E + + I E G V + ++LD + + + ++D S Sbjct: 281 DQIVENIQWICEKNNVETPHIMTEFGSYTVGESGATIYSILDQKLQNDKELWYMIDGSFI 340 Query: 267 AHVPDYLLYQE----SATIYPNTGPYTAMVCGRSCLAGDIFGE-----FHFEKPVKIGD- 316 H+PD + A N + + G +C + D + F V+ + Sbjct: 341 THLPDVWGLNQKFILMAINNWNEPFHKVKMGGLTCDSMDYYNSEAHSFEVFLPKVERNEQ 400 Query: 317 -RISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350 + F Y + + G I P + + D Sbjct: 401 QYVGFFHTGAYQESLG-GYGGIQHCLIPAPKHVLVDKDEE 439 >gi|198427499|ref|XP_002125033.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Ciona intestinalis] Length = 315 Score = 73.6 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 82/254 (32%), Gaps = 14/254 (5%) Query: 96 IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI 155 + F+ V +L+K K K+ LR+N + D K + Sbjct: 25 MTFDNVDELHKIKRI--HPTGKLLLRLNVTDFEKGVKFGDKFGASMSEARKLTLLCKELN 82 Query: 156 KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDY--P 210 N+ G+ FH + S L ++ + ++ I +GGG + Sbjct: 83 LNLVGICFHPGSGSDSSEATRNCLHRCKELYDFATSNEIHLKIIDIGGGFVCGENFIEIS 142 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD---ISENIKNLVIVDSSVEA 267 + K F + V + EPG V N T V + + K + Sbjct: 143 EQVTATVGKLFPPETGVTVIAEPGRFFVKNAFGFVTPVHGKAIVGDRAKYYIGAGVFSTF 202 Query: 268 HVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + + ++ Y++ V G +C D+ +IGD F+++ Sbjct: 203 CMTLFEKFERIPENLSRKAEKCDLYSSTVYGPTCAGVDVVLNNILLPEAQIGDWWFFDNM 262 Query: 324 AGYNINRKNWFNGI 337 Y+ FNG Sbjct: 263 GAYSSLVSLGFNGY 276 >gi|119628015|gb|EAX07610.1| hCG1787701, isoform CRA_b [Homo sapiens] Length = 172 Score = 73.6 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 49/166 (29%), Gaps = 16/166 (9%) Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEPGEAIVTNT 241 + + +GGG + P + ++ E+ V++ EPG V + Sbjct: 7 RAGHDMSCLDIGGGFPGMEGSGPKFEELARVISAALAQDLPEERGVKVIAEPGCFYVESV 66 Query: 242 TTLNTTVLDISENIKNLVIVDS----SVEAHVPDYLLYQESATI-----YPNTGPYTAMV 292 ++ ++ V +E + P Sbjct: 67 CMAAVNIIAKRAVLEPGGWARMALGGDATVQVSPGPGGEEGQRVGLCPRSWGAAPLPLHP 126 Query: 293 CGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 C A D +F E + +GD + F + Y + + FNG Sbjct: 127 LCPMCDAFDRLFLEDVRLPELDVGDWLVFPSMGAYMSSMSSSFNGF 172 >gi|221054205|ref|XP_002261850.1| s-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium knowlesi strain H] gi|193808310|emb|CAQ39013.1| s-adenosylmethionine decarboxylase-ornithine decarboxylase, putative [Plasmodium knowlesi strain H] Length = 1393 Score = 73.6 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 62/229 (27%), Gaps = 8/229 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I T I+ +K+L V ++K + L +S+ Sbjct: 848 IDTSVVCINLEKILVQYIRFKKNL--PSVTPFYSVKSNNDDIVLKFLYGLNCNFDCASVG 905 Query: 62 EVML---GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 EV E + K N + + + K + + Sbjct: 906 EVKKLTTLLPDIARERIIFANTIKSINSLIYAKNENINLCTFDNIEELKKIRKYHPKCSL 965 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 LRIN K ++ E + N+ G+ FH K+ + Sbjct: 966 LLRINVDFKNYKSYMSSKYGANEHEWENILAFGKEHNLNIIGVSFHVGSNTKNLFDYCQA 1025 Query: 179 LKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 +K F E ++LGGG + K ++ + Sbjct: 1026 IKLSRDVFNISKKMGYNFEILNLGGGYPEELEYDSAKKNEEKKYCTLNE 1074 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 20/51 (39%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 Y A + G+SC D+ + I D I +E Y + FNG Sbjct: 1326 YLANIFGQSCDGLDMITSITYLPECYINDWIIYEYAGAYTFVSSSNFNGFR 1376 >gi|83955986|ref|ZP_00964497.1| probable diaminopimelate decarboxylase [Sulfitobacter sp. NAS-14.1] gi|83839750|gb|EAP78928.1| probable diaminopimelate decarboxylase [Sulfitobacter sp. NAS-14.1] Length = 475 Score = 73.6 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 60/435 (13%), Positives = 109/435 (25%), Gaps = 84/435 (19%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P + N+ + G + A K G ++S E Sbjct: 45 PLNIQSVDPFRRNIAQLTDCVTDYGLPFLPMFARKANKCLSYVQAARDMGIGIDTASHAE 104 Query: 63 VMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI-- 118 V E G+ A + + T+I + +L +D A+ K I Sbjct: 105 VDQCLEQGLPGDRIVCTAAVKDRALMILCVGGGVTVILDNEDELELLEDVAEGATKPISV 164 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 GLR+N + + P +++ SE ++GL FH N + + + Sbjct: 165 GLRLNGFERDGTKLYSRFGFPLTQIPTLAARIGASETLRLDGLHFHLNGYSAEDRIAAIL 224 Query: 179 LKNI-EKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLE-- 232 + T ++ +GGGI + + S Sbjct: 225 QTLPLIHKINGDSTAPFFLDIGGGIPMNYLGDAVEWETWLAELDRALSGDRDPITQHNDG 284 Query: 233 PGEAIVTNTTTLNTTVLDISENIKN------LVIVDSSVEAHVPDYL------------- 273 G + V + +V AH+ D Sbjct: 285 LGRKAGGEGKVDSYPVAQSLVQEDWMRRILDHMADGQTVAAHLRDAHISLRCEPGRSLLD 344 Query: 274 ------------------------------------LYQESATIYPNTGPYTAMVCGRS- 296 + + P GP + G Sbjct: 345 GCGITLARVAFCKRDSAGTPVIGVQMNRTQSRSGFAEFALDPLMVPAPGPRKEPIEGYLS 404 Query: 297 ---CLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNI----NRKNWFNGINMPTIAVKNV 347 C + + F + VK GD + F + AGY + +R + F + Sbjct: 405 GTYCTESEWLTRRKMSFPQGVKAGDLMVFPNTAGYLMHFLESRSHQF---PLARNVFVTE 461 Query: 348 DGTIKAIREFSYNDY 362 + +D Sbjct: 462 GNAGAVV----LDDI 472 >gi|255539080|ref|XP_002510605.1| arginine/diaminopimelate/ornithine decarboxylase, putative [Ricinus communis] gi|223551306|gb|EEF52792.1| arginine/diaminopimelate/ornithine decarboxylase, putative [Ricinus communis] Length = 97 Score = 73.6 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 +++ V G +C A D + H + I D + F ++ Y + FNG Sbjct: 33 HSSTVFGPTCDALDTVLKGHPLPELHINDWLVFPNMGAYTAAAGSNFNGF 82 >gi|19749310|gb|AAG45731.2|AF229441_2 Y4yA [Sinorhizobium fredii] Length = 450 Score = 73.3 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 50/374 (13%), Positives = 99/374 (26%), Gaps = 62/374 (16%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P L+ L NL + V+ + K + G+ G SSL Sbjct: 35 GSPLNLVWPDALRENLAALKGVLTERRVQHAIYYGAKGNKSPGLMQAALSASAGLDVSSL 94 Query: 61 YEVMLGHE-KFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 YE+ G A + A+++ I ++ +L + Sbjct: 95 YELRDARRLGADGARLVATGPAKTNAFHQALINCNALISVDSPEELEDLIHGLPADAGQQ 154 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS-A 177 + + + P + +GL FH + + + + Sbjct: 155 PILLRLR--PRDQSKSRFGMPPDAIVHCLVRLAGEGRLRFDGLHFHLSGYRRETRVAALS 212 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQR----------------- 217 ++ E I +GGG+ Y Q Sbjct: 213 EAADLIAEARRMGFFPGMIDIGGGLPIQYVDRARYDAHLAAQAPEDYRTGKIPDSFYPYG 272 Query: 218 ----------------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + + + + + +EPG A+ + + Sbjct: 273 STLSAADWLHRLLEAEMNQGRSVAGYLAREGLTLAMEPGRALADQAAITVFRISRVKAVG 332 Query: 256 KNLVIVDSSVEA---------HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF 306 + ++ S A + L+ AT+ + P A + G SCL D+ Sbjct: 333 PDSHVIFVSFSACETWFASEFLIDPILVPATKATV--QSPPVRAYLAGHSCLDEDVISNR 390 Query: 307 H--FEKPVKIGDRI 318 F + GD + Sbjct: 391 WLTFPTAPRAGDLL 404 >gi|222628307|gb|EEE60439.1| hypothetical protein OsJ_13656 [Oryza sativa Japonica Group] Length = 187 Score = 73.3 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 2/83 (2%) Query: 262 DSSVEAHVPDYLLYQESATIYPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 S+ + D + + G T V G +C + D + + + D + Sbjct: 97 YGSLNCILLDSYVPRPRPLAGARPGEETHASTVFGPTCDSIDTVVTGYQLPEMSVDDWLV 156 Query: 320 FEDVAGYNINRKNWFNGINMPTI 342 F+D+ Y + FNG I Sbjct: 157 FDDMGAYTTAAGSSFNGFATSAI 179 >gi|226942857|ref|YP_002797930.1| arginine decarboxylase [Azotobacter vinelandii DJ] gi|226717784|gb|ACO76955.1| arginine decarboxylase [Azotobacter vinelandii DJ] Length = 636 Score = 73.3 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 83/299 (27%), Gaps = 46/299 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTL---NQYMD 53 P + L + + +G L +K + +++ Sbjct: 69 PLLVRFPDILQDRVRQLTSAFDANIARLGYQSGYTALYPIKVNQQEAVVESIIATANVSI 128 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKF 107 G + S E++ YKD E L + I+ S++ Sbjct: 129 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALIGQKLGHSVFIVVEKESEVQLI 188 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158 ++A +L L + +S + G + + V Sbjct: 189 IEEAAELRVVPQLGLRVRLSSLTSSKWADTGGEKAKFGLSAAQLLRVAERLRDAGLEQGV 248 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + + ++ + +GGG+ Sbjct: 249 RLLHFHMGSQIANLADYQGGFKEAIRYYAELRALGLPLDHVDVGGGLGVDYDGTHSRNPS 308 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 +Y + D+ + +++ I+ E G A+ + L V D+ + Sbjct: 309 SINYDMDDYAATVVGMLQEFCDAQGLPHPHIFSESGRALSAHHAMLVVQVTDVERHNDQ 367 >gi|88601108|gb|ABD46552.1| aspartokinase-like protein [Acanthamoeba castellanii] Length = 180 Score = 72.9 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 17/181 (9%) Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEF 221 S + + + + LGGG+ + +++ + +KEF Sbjct: 1 SGILSSTTWRENADYLAACARQYFPSATSLDLGGGLGIVEVPGEQTALNMQEVDKLVKEF 60 Query: 222 SEKYS-VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279 +K ++LEPG + L TV + I VD+ + + LY Sbjct: 61 KQKNPEFSLWLEPGRFPIAEAGVLLCTVTQLKSKGSYNYIGVDTGFNSLIRPI-LYAAHH 119 Query: 280 TIYPNTGPY--------TAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINR 330 I + + TA + G C +GD+FG + GD + Y + Sbjct: 120 QIVNLSRLHSTPGGPSITAEIVGNICESGDVFGHARTMPADTQEGDIVLIATAGAYGHSM 179 Query: 331 K 331 Sbjct: 180 A 180 >gi|291388378|ref|XP_002710636.1| PREDICTED: ornithine decarboxylase antizyme inhibitor, partial [Oryctolagus cuniculus] Length = 300 Score = 72.9 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 76/246 (30%), Gaps = 25/246 (10%) Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 + + R +C +++ +I V + E++ ++ + + + Sbjct: 15 GEEGNMKFGTSLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARCVFDMA 74 Query: 187 GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTNTTT 243 G F + + +GGG + V L F E ++I EPG V++ T Sbjct: 75 GEFGYTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYVSSAFT 134 Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE----------------------SATI 281 L ++ + +Y Sbjct: 135 LAVNIIAKKVVENGKLSSGVEKTGSDEPAFVYYMNDGVYGSFASKLSENLNAIPEVHKKC 194 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + +T+ + G SC D+ E + +GD + F+++ + + + FN P Sbjct: 195 KEDEPLFTSSLWGPSCDELDLIVENCLLPELNVGDWLIFDNMGADSFHEPSAFNDFQRPA 254 Query: 342 IAVKNV 347 + Sbjct: 255 VYYMMS 260 >gi|54024534|ref|YP_118776.1| putative decarboxylase [Nocardia farcinica IFM 10152] gi|54016042|dbj|BAD57412.1| putative decarboxylase [Nocardia farcinica IFM 10152] Length = 469 Score = 72.5 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 59/206 (28%), Gaps = 5/206 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 TP +++ Q L N+ + + V+ + A K + + + G +S Sbjct: 33 GTPAHVVFPQVLAENVGALAAVLDRSPVRSRMCYAHKVNRSPALARAAERCGIGIDVASP 92 Query: 61 YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ FG + +++ TI + + +L D A+ Sbjct: 93 GELANARAAGFGPARIEVTGPKGARFLATAVASGATINVDNLWELAALDDLARGTDPIPT 152 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG-LMFHNNCENKSFLCFSAM 178 L + + P + + I+ + + Sbjct: 153 LLRVGDLPGTPRSRFGVPLPRVDDALRLLAASAARIRFLGFAFHLDSGAVTDRVRAVQTC 212 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHF 204 L IE+ + +GGG+ Sbjct: 213 LALIERAHA-HGLAPHVLDIGGGLRQ 237 Score = 44.4 bits (103), Expect = 0.027, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 2/44 (4%) Query: 290 AMVCGRSCLAGDIFG-EFHFEKPV-KIGDRISFEDVAGYNINRK 331 GR CL D+ F + GD + F + A Y+++ Sbjct: 394 VYFAGRLCLERDLITTRQVFLPGLPAPGDVVVFPNTAAYHMDLS 437 >gi|319785767|ref|YP_004145242.1| arginine decarboxylase [Pseudoxanthomonas suwonensis 11-1] gi|317464279|gb|ADV26011.1| arginine decarboxylase [Pseudoxanthomonas suwonensis 11-1] Length = 629 Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 47/364 (12%), Positives = 104/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P L L + L A G + +K G+ TL + Sbjct: 59 PLLLRFPDILGDRLAQLQSAFALAMDDVGYAGGYTAVYPIKVNQHRGVAGTLAGHHGEGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107 G + S E+M YKD E + + T + K Sbjct: 119 GLEAGSKPELMAVLALSRPGGLVVCNGYKDREYIRLALIGRKLGLETFIVIEKPSELRLV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A+ L + GL + ++ + + G + ++ + Sbjct: 179 MEEARALGVQPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQLLDLWKNLRDSGMTDCL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + ++ + F +I ++ +GGG+ + Sbjct: 239 QLLHFHMGSQISNVRDIANGMREAVRYFSELSRLGAKIRYMDVGGGLGIDYEGTRSRSEC 298 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 +Y + + + + + +I E G A+ + L +++ + + Sbjct: 299 SINYGLHQYAANIVQPLAEACAEQGLPAPRIVTECGRAMTAHHAVLVADTIEVEQAPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V E H+ + + + G LA G+ + + Sbjct: 359 VPDAHDDEPAAIRHLRELHAELERRPPLELFHEAQHFHAEG---LAAYALGQIDLPQRAR 415 Query: 314 IGDR 317 + D Sbjct: 416 VDDL 419 >gi|225445350|ref|XP_002281602.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 240 Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 20/170 (11%) Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--------QIYLEPGEAIVTNT 241 + + + +GGG + + +KE Y +I EPG Sbjct: 69 LPPMHVLDIGGGF---QESPTFHEIAAVIKEAINDYFPSSETSEDLKIMAEPGRFFAETA 125 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI---------YPNTGPYTAMV 292 TL + ++ + + Y +S+ + + N + + V Sbjct: 126 FTLVSNIIGKRVRGEKREYWIDDGIYGSFNLPAYDKSSMMVKPLLGGSEWMNKAKFCSTV 185 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 G C + D+ + + D + F ++ Y + FNG ++ +I Sbjct: 186 FGPMCDSMDMVLAESQLPELHMNDVLVFYNMGAYTASAGTRFNGFDISSI 235 >gi|207109548|ref|ZP_03243710.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori HPKX_438_CA4C1] Length = 178 Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 19/174 (10%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFG 71 ++L N +R+ +G K+LLALK +A W F L Q ++G +S LYE L E+FG Sbjct: 5 ERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFG 64 Query: 72 G-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQKL------HK 116 G E Y+ A+K+ E+ A+L +IIFN+ Q ++ DK ++L Sbjct: 65 GRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQLESLGLSPI 124 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLMFHNN 166 K+GLRINP S + +P SRLG + ++ V+GL FH + Sbjct: 125 KMGLRINPLYSEVTPAIYNPCSKVSRLGITPSGFEKGVKEHGLEGVSGLHFHTH 178 >gi|289812001|ref|ZP_06542630.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 69 Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYY 363 EF K +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 5 EFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMV 64 Query: 364 N 364 Sbjct: 65 K 65 >gi|682769|emb|CAA40813.1| mccE [Escherichia coli] Length = 521 Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 34/336 (10%), Positives = 84/336 (25%), Gaps = 24/336 (7%) Query: 44 MFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ 103 M ++ S+ E+ L K E+ + I + + + Sbjct: 1 MVQIISGKGLYAEVCSVDEMNLAKRDGFKRIVFDGPLKKTSELLKAIEIGALIEVDNIDE 60 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMF 163 + + + + + S Y + + +SE ++G Sbjct: 61 CKRLNELCKLHKLTCRIHLRLSHYYDDNLSRFGLSESEAINLLEMLISKSEYLILDGFHL 120 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQ 216 H + + + ++ ++LG GI + + F Sbjct: 121 HVGSNLPNAEKICKAIIQYHELILRYMPDDGTLNLGSGIPADSFSASSDNPTPCPEVFFS 180 Query: 217 RLKEFSEKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP 270 + + + EPG +V + V+ V + +P Sbjct: 181 SIYDTIKNCFGTVCDKWNYIFEPGRHLVEDFGYFIGKVISTKNRYGVKVAQTNIGINWIP 240 Query: 271 DYLLYQE------SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS-FEDV 323 + + + ++ G +C D + D + Sbjct: 241 SIRNWDHSFTLFHNHNHISDDKSDEYIIAGFNCFECDCLFPSVILPS-NLSDYLFSVRGC 299 Query: 324 AGYNINRKNWFNGINMPTIAVKNVD--GTIKAIREF 357 Y++ N + N+ + D + R Sbjct: 300 GAYDMQTGNQW-TRNLYAVYTITNDVVNISRIHRRE 334 >gi|330946400|gb|EGH47481.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. pisi str. 1704B] Length = 215 Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 19/191 (9%) Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPV---- 211 G+ FH + + + A + ++ F ++ I++GGG Sbjct: 23 GISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLET 82 Query: 212 --KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSS 264 ++ + LKE +I LEPG ++++N L + V+ ++ + + Sbjct: 83 YAEEIIRFLKEDFGDDLPEIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGK 142 Query: 265 VEAHVPDYLLYQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISF 320 + + G ++ G +C + DI E + + IGDR+ + Sbjct: 143 FSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYW 202 Query: 321 EDVAGYNINRK 331 Y + Sbjct: 203 LSTGAYTTSYS 213 >gi|333022870|ref|ZP_08450934.1| putative Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. Tu6071] gi|332742722|gb|EGJ73163.1| putative Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. Tu6071] Length = 531 Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 45/150 (30%), Gaps = 4/150 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + +P ++ Q+++ N+ R ++ + A K + + L G +S Sbjct: 32 LGSPLNVVLPQQVVENVRRFEAARDRHHLRGTVYFAHKANRSSALVRALATSGAGLDVAS 91 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 L E+ G F + + + T+ +L + + Sbjct: 92 LEELRHGLGSGFTPDRIGATGPKEPEFLWLAARTGVTVTVEDQGELERLAVLVARYE-LP 150 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK 148 +++ +S SR G Sbjct: 151 RVKVQLRLSGFPSQGVRQLSRPSRFGTPFA 180 Score = 42.8 bits (99), Expect = 0.087, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 18/131 (13%) Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA--------------HVPDY 272 + +EPG A++ V+D+ + V ++ A + Sbjct: 331 YDLAVEPGRALMDQCGATLARVVDVRTGPDGIAQVRLAMNADDCALEEHGILVDPLLLPR 390 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYNINR 330 P + G CL D+ + G+ ++F + AGY ++ Sbjct: 391 PGGAPVPDPGPGAATGVY-LHGNLCLESDLITRRLVQLPRLPAPGELLAFANTAGYAMDF 449 Query: 331 KNWFNGINMPT 341 N P Sbjct: 450 SAQ-NAERRPP 459 >gi|307326215|ref|ZP_07605412.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] gi|306888158|gb|EFN19147.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] Length = 502 Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 28/234 (11%), Positives = 64/234 (27%), Gaps = 20/234 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYM---DGTT 56 + +P ++ +++ N + + + + ++ A K + + L G Sbjct: 33 LGSPLNVLLPERIAENTERFRDVYRRHHLAGRVYFAHKANRSSSLARRLAAEDPAAVGVD 92 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-- 113 +SL E+ F E + T+ ++ +L + D +K Sbjct: 93 VASLGELRHVLGCGFTPERIMATGPKDPEFLWLAARVGVTVNLDSRGELEQLADLVRKYA 152 Query: 114 -LHKKIGLRINPSVSYSKFI--LADPNRPFSRLGEKCKD------KIESEIKNVNGLMFH 164 + LR++ S + SR G + +E V Sbjct: 153 LPRVDVLLRLSEFESAAGPEASGVRVLSRRSRFGSPAGEAGELLSAVERHRDAVELTGVA 212 Query: 165 NNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC 215 + + F L+ + +GGG + Sbjct: 213 YHLDTTGFAEKVRALERCVMVMDECRARGLAPRVVDIGGGFGVGYVADAGEWES 266 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 48/147 (32%), Gaps = 18/147 (12%) Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-------------- 269 ++ + EPG A+V VLD+ + + V + Sbjct: 338 EHLYDLCAEPGRALVDQCGLSLARVLDVRRTGEGAGPGEYLVRLGMNAGDVSLEEHGVLV 397 Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYN 327 LL + + P + G CL D+ F + + GD ++F + AGY Sbjct: 398 DPVLLPRTGGGGERDEEPVGVYLVGNLCLEADLITRRMVFLPRLPRTGDLLAFANTAGYA 457 Query: 328 INRKNWFNGINMPT--IAVKNVDGTIK 352 ++ +AV G+ + Sbjct: 458 MDFHAHHAQRQPVARTVAVVREGGSWR 484 >gi|333029444|ref|ZP_08457505.1| Biosynthetic arginine decarboxylase [Bacteroides coprosuis DSM 18011] gi|332740041|gb|EGJ70523.1| Biosynthetic arginine decarboxylase [Bacteroides coprosuis DSM 18011] Length = 631 Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 37/316 (11%), Positives = 89/316 (28%), Gaps = 49/316 (15%) Query: 2 IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52 I TP + L + ++ + K ++ +K + + + Sbjct: 56 IATPLLVRFPDILDHRIENTAQCFKQASEEYNYKAQNFIIYPIKVNQMQPVVSEIISHGK 115 Query: 53 ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102 G + S E+ E+ YKD + ++ ++ Sbjct: 116 KFNLGLEAGSKPELHAVIAINTDSESLIICNGYKDESYIELALLAQKMGKRIFLVVEKMN 175 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156 +L +KL+ + + I ++ S + + S+ G + +E+ Sbjct: 176 ELKLIARLGKKLNVRPNIGIRIKLASSGSGKWEDSGGDASKFGLTSSELLEALDYLESKD 235 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + + +E++ +GGG+ Sbjct: 236 MKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHKLGFAVEFVDVGGGLGVDYDGTR 295 Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252 + ++Y I E G A+ + + L VL+ + Sbjct: 296 SASTGSSVNYTLQEYVNDSISSMVDASDKNGLPHPNIITESGRALTAHHSVLIFEVLETT 355 Query: 253 ENIKNLVIVDSSVEAH 268 + + S H Sbjct: 356 SLPEWDDEMVVSENDH 371 >gi|308485210|ref|XP_003104804.1| hypothetical protein CRE_23889 [Caenorhabditis remanei] gi|308257502|gb|EFP01455.1| hypothetical protein CRE_23889 [Caenorhabditis remanei] Length = 485 Score = 71.7 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 38/375 (10%), Positives = 106/375 (28%), Gaps = 42/375 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63 P++++D + L+ + ++ A+ C A + L+ +D S+ E+ Sbjct: 62 PFFVMDVAAIERRLEALRVMLPR--IRPNYAVACNADPVLARVLSNNIDVNFEVSNSAEL 119 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L + + + + F ++ +I + I Sbjct: 120 ELTNLYSEPTRSIFCSQLMTRKAIKTAVLSGCMTFVVENEKQMTDVMNASPEAEIVIGIC 179 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 S S + E+ + N++G+ A+ Sbjct: 180 LSYSSGEVP----FGCSVDELEEILEMGHLLGANISGIYLELGVRASLHDYIHALHDASS 235 Query: 184 K--EFGHFITQIEWISLG---------GGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 + +++ G G ++ D + + E + S++ Sbjct: 236 MIVTANEKFLSLRYVTFGNLAIPTAEDGSVNNNDFISFCNAMNETICELFDD-SIEFSAN 294 Query: 233 PGEAIVTNTTTLNTTVLD--------------------ISENIKNLVIVDSSVEAHVPDY 272 G +VTN L T V+ + + + + + Sbjct: 295 IGRFLVTNAFALCTNVIGKRALDAKFITNDDFDDGVGFVYQTNDGVYGSFGCKQMDINPL 354 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332 + + + + G + D+ + +++G+ + +E + + I + Sbjct: 355 CKPLDVQKESVDEQLHFGTILGPTLDCTDVAQRITKCRQLRVGEWLVWEQMGAFTIPADS 414 Query: 333 WFNGINMPTIAVKNV 347 ++P + + Sbjct: 415 E---HSVPPVYYYSG 426 >gi|294675257|ref|YP_003575873.1| arginine 2-monooxygenase [Prevotella ruminicola 23] gi|294473439|gb|ADE82828.1| arginine 2-monooxygenase [Prevotella ruminicola 23] Length = 630 Score = 71.7 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 28/260 (10%), Positives = 76/260 (29%), Gaps = 28/260 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ + K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTWSCFKKASEEYDYKGENYVVYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++L +A+ Sbjct: 126 KPELHAVIAMQCQSDSIIICNGYKDQSYIELALLAQKMGKQIFIVVEKMNELEIIAREAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163 K++ + + I ++ S + + S+ G + +E+ + + F Sbjct: 186 KMNIRPNIGIRIKLASSGSGKWEESGGDASKFGLTSAELLEALDFLEKKGLNDCLRLIHF 245 Query: 164 HNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + L+ + ++++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALREASQFYIQLHKMGYNVDFVDCGGGLGVDYDGTRSPSSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTN 240 ++Y EA N Sbjct: 306 SIQEYVNDCIYTFVEAANKN 325 >gi|327538875|gb|EGF25516.1| diaminopimelate decarboxylase [Rhodopirellula baltica WH47] Length = 447 Score = 71.3 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/406 (11%), Positives = 90/406 (22%), Gaps = 85/406 (20%) Query: 8 LIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE--- 62 ++ + +N+ + A V ++ A K T G +S E Sbjct: 24 VLSTDPMRSNIKDLQNVASQASVPLQIHFARKANKCAEFVRTGLMESIGFDVASESETQQ 83 Query: 63 -----VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ----LNKFKDKAQK 113 + F I + + + ++ + + Sbjct: 84 TLDELLRFPQHPFDSPIVCTAAVKPVSLIRSCVLSNIVLVIDNEDELTTLRETLAHLGST 143 Query: 114 LHKKIGLRINPSVSYSKFILADPNR-PFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 K S L P L + + V G+ FH + ++ F Sbjct: 144 APKARIAFRLQHCSAKFPDLPSRFGMPADELTLLARSLCDEPRIQVVGIHFHVHRSDEQF 203 Query: 173 LCF-----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------------- 214 + + W+ +GGG + + Sbjct: 204 SPSFTKALIEDALRVVDRVREIGHAVAWLDMGGGFPVNYLCHQKQWQRFFKEAHTFTESS 263 Query: 215 ------------------------------------CQRLKEFSEKYSVQIYLEPGEAIV 238 L + + + EPG A++ Sbjct: 264 GRFEANRKLTWNQRPLRDIDSTWQPMNAADWFRAVLTSSLAYEINRRELILKCEPGRALL 323 Query: 239 TNTTTLNTTVLDISENIKNLV----IVDSSVEAHVPDYLLYQESATIYPNTGPYTA---- 290 VL + + +++SS D L N Sbjct: 324 DGCGLTIAEVLFVKRDQNQNHLIGLMMNSSQCRTTRDDFLVDPIVISVSNESAKPTNQTD 383 Query: 291 ------MVCGRSCLAGDIFG--EFHFEKPVKIGDRISFEDVAGYNI 328 G C + F F + + GD + + A Y + Sbjct: 384 HAEIEGYFVGGYCTESEYLMQRRFRFPRGISRGDFVLIPNTAAYQM 429 >gi|196016996|ref|XP_002118346.1| hypothetical protein TRIADDRAFT_62376 [Trichoplax adhaerens] gi|190579062|gb|EDV19168.1| hypothetical protein TRIADDRAFT_62376 [Trichoplax adhaerens] Length = 143 Score = 71.3 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%) Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 G A++ G++C + D+ + GD I FE+V Y++ FN Sbjct: 54 PVKKNTNGTTNAVLFGQTCDSLDLLLNECSLPKLNAGDWIYFEEVGAYSLVLATEFNSFK 113 Query: 339 MPT 341 P Sbjct: 114 KPK 116 >gi|296141953|ref|YP_003649195.1| Orn/DAP/Arg decarboxylase 2 [Tsukamurella paurometabola DSM 20162] gi|296030087|gb|ADG80856.1| Orn/DAP/Arg decarboxylase 2 [Tsukamurella paurometabola DSM 20162] Length = 459 Score = 71.3 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 49/388 (12%), Positives = 109/388 (28%), Gaps = 69/388 (17%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P +I+ L + + + A +++ A K A + + G +S Sbjct: 48 GSPVNVINPAPLAGHAGELIAAAQEARVDLRVYFARKANKALALVEAALAAGHGIDVASE 107 Query: 61 YEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ L + + +++ I + +L + + Sbjct: 108 QELRQVLAFNPQPDRIILTAAVKPNALLKLAVNSGVVISIDNGDELAALVRVIAECKHRE 167 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-----NVNGLMFHNNCENKSFL 173 + + ++ P SR G + E ++G FH + + Sbjct: 168 DVPVALRIAA-----ELPGAAPSRFGMAQEQIREILNNFPGQLALSGFHFHLHGYSAEHR 222 Query: 174 CFSAMLKN-IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC----------------- 215 + + H + +I +GGGI D P Sbjct: 223 SEALAQALDLIATARHQQHRPTFIDIGGGIPMRYLDTPATWDAYQQSTKSSDLSAFWAAK 282 Query: 216 --QRLKEFSEKYSVQIYL----------------------EPGEAIVTNTTTLNTTVLDI 251 + + ++ +L EPG ++ V Sbjct: 283 APENVYPMWQELVRGAWLASVLSAPGLAQRIADAGIRLHAEPGRCLLDGCGLTVARVEFR 342 Query: 252 SENIKNLVIVDSSVE---------AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302 + ++ ++ + D +L T P + + G C+ ++ Sbjct: 343 KQRSDGTWLIGLAMNRTQLRSAADDFILDPILIPAPE--RAPTPPISGFLVGAYCIEAEL 400 Query: 303 FGEFH--FEKPVKIGDRISFEDVAGYNI 328 F + V +GD I+F + AGY + Sbjct: 401 ITRRRITFPEGVAVGDLIAFTNTAGYLM 428 >gi|197122389|ref|YP_002134340.1| arginine decarboxylase [Anaeromyxobacter sp. K] gi|220917171|ref|YP_002492475.1| arginine decarboxylase [Anaeromyxobacter dehalogenans 2CP-1] gi|196172238|gb|ACG73211.1| arginine decarboxylase [Anaeromyxobacter sp. K] gi|219955025|gb|ACL65409.1| arginine decarboxylase [Anaeromyxobacter dehalogenans 2CP-1] Length = 654 Score = 71.3 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 31/266 (11%), Positives = 72/266 (27%), Gaps = 31/266 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMD--- 53 P + + L + A ++ + +K + D + Sbjct: 75 PCVVRFQDVLRARVKQINEAFGKAVAEMGYGASYFGVYPIKVNQMREVVDEIVDAGAPYH 134 Query: 54 -GTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 G + S E+++ + YKD E + + + + K + Sbjct: 135 YGLEAGSKGELLVVLGMNADPDALTICNGYKDEEYLRLALLGRKLGRKVIVVIEKLSELP 194 Query: 112 QKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKIES--------EIK 156 Q L + ++P + + F++ G + I++ + Sbjct: 195 QLLRLGEEMGVDPMIGLRSKLTTRGTGKWEGSSGDFAKFGLTVPELIQAVRILKEAGKEH 254 Query: 157 NVNGLMFHNNC---ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 L FH E + + + IE+ +GGG+ D Sbjct: 255 CAKLLHFHVGSQLTEIRVVKDAVNEGARVYAKLRKMGLPIEYFDVGGGLGVDYVGTRTND 314 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVT 239 F + ++Y + + Sbjct: 315 FTSSVNYSMDEYVGDVVYNVQRVCMN 340 >gi|331011411|gb|EGH91467.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 174 Score = 71.3 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 16/167 (9%) Query: 188 HFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 ++ I++GGG ++ + LKE +I LEPG ++++N Sbjct: 1 EDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEIILEPGRSLISNA 60 Query: 242 TTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMVCGR 295 L + V+ ++ + + + + G ++ G Sbjct: 61 GILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGP 120 Query: 296 SCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338 +C + DI E + + IGDR+ + Y + FNG Sbjct: 121 TCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGFP 167 >gi|159572757|emb|CAP19188.1| arginine decarboxylase [Mus musculus] Length = 323 Score = 71.3 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 29/288 (10%) Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 K + + + +++ K K+ L I S+ Sbjct: 8 GVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIATQDSH 67 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186 S L+ + + + V G+ FH ++ + + F Sbjct: 68 SLNHLSLRFGASLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADARLVFQM 127 Query: 187 -GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + + LGGG + ++ F E V I E G VT Sbjct: 128 GEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEGCGVDILAELGRYYVT 187 Query: 240 NTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA--- 290 + T+ VLD + + S+ ++ + + ++ ++ NT P A Sbjct: 188 SAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYYLDEGVYGVFNSVLFDNTCPTPALQK 247 Query: 291 -----------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 + G + D E + +++GD + F+++ Y Sbjct: 248 KPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 295 >gi|268560856|ref|XP_002646307.1| Hypothetical protein CBG12014 [Caenorhabditis briggsae] gi|187029851|emb|CAP31061.1| hypothetical protein CBG_12014 [Caenorhabditis briggsae AF16] Length = 476 Score = 71.3 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 100/357 (28%), Gaps = 41/357 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63 P++++D + L+ ++ ++ C A + L+ +D ++ E+ Sbjct: 56 PFFVMDVAAIERRLEVLRSTLPL--IRPNYSIACNADPVLARVLSNNLDVNFEVATSGEL 113 Query: 64 MLGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + + +AV + C T + Q+N + + ++ L Sbjct: 114 ELTCLHSEPSRIIFCSQLLTRKGIKNAVQAGCGTFVVENEKQMNDVMNAS--ADAQMFLA 171 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + S + + D N+ G+ +A+ Sbjct: 172 VCLPYSSGEVP----FGCSIDELVEILDMAHLLGANLTGIYLELGVRATLDDYITAIHDA 227 Query: 182 IE--KEFGHFITQIEWISLG-------GGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 + ISLG + + R + Sbjct: 228 RSIIDTASTKFLDLRHISLGNLVIPTGTDGSVNNNSISFCETINRAVSELFDDHIDFSAN 287 Query: 233 PGEAIVTNTTTLNTTVLD---------ISENIKNLVIVDSSVEAHVPD---YLLYQESAT 280 G +VTN TL T V+ +++ + V + L + Sbjct: 288 IGRFLVTNAFTLCTNVIGKRALNAKYITNDDFDDGVGYLYQTNDGIYGSFGCKLMDINPQ 347 Query: 281 IYPNTGPYTAM---------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328 P G T V G D+ + +++G+ + +E + + I Sbjct: 348 CKPLNGEETFDGSNQLYLGAVLGPILDGCDVAQRLTRCRQLRVGEWLVWEKMGAFTI 404 >gi|119485411|ref|ZP_01619739.1| arginine decarboxylase [Lyngbya sp. PCC 8106] gi|119457167|gb|EAW38293.1| arginine decarboxylase [Lyngbya sp. PCC 8106] Length = 674 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 106/355 (29%), Gaps = 60/355 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + ++ A + + +KC + + L ++ Sbjct: 95 PLLIRFPDILEDRIERLNACFAKAIARYKYPGNYRGVYPVKCNQERHLIEDLVRFGQPFK 154 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--D 109 G + S E+++ + YKD + + + + + + + Sbjct: 155 FGLEAGSKPELLIALAMLQTPGSLLICNGYKDRDYIETAMLAQRLGHTPIIVMEQLEEVN 214 Query: 110 KAQKLHKKIGLRINPSVSYS-----KFILADPNRPFSRLGEKCKDKIES--------EIK 156 A + + +G++ + ++ G + I+ ++ Sbjct: 215 IAIEASRHLGIQPILGIRAKLSTKGMGRWCGTTGDRAKFGLTIPEMIQVVEALKLAGLLE 274 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------- 206 + L FH + S ++ + E H ++++ +GGG+ Sbjct: 275 CLQLLHFHIGSQISSISVIKDAIREASQIYVELSHLGANMKYLDVGGGLGIDYDGSKTNF 334 Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ + ++ + E G AI ++ + L VL SE K Sbjct: 335 QASKNYNMQNYANDIVAEVKEACEERKVSVPTLISESGRAIASHQSVLVFDVLGTSEVAK 394 Query: 257 NLVIVDSSVEAHV------------PDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 N + + + PD I + G L+ Sbjct: 395 NAPPSITKEDHLILRNLTETYQAINPDNYQEAYHDAIQFKEEAISLFNFGYLSLS 449 >gi|154322364|ref|XP_001560497.1| hypothetical protein BC1G_01329 [Botryotinia fuckeliana B05.10] gi|150850576|gb|EDN25769.1| hypothetical protein BC1G_01329 [Botryotinia fuckeliana B05.10] Length = 302 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 83/301 (27%), Gaps = 38/301 (12%) Query: 50 QYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNK 106 Q G +S+ E+ + + K E A N F+ + +L+ Sbjct: 2 QLGVGFDCASVEEMHTVLSLGADPGSIIFANPCKAPEALAFAYNVGVRRTTFDNLDELDS 61 Query: 107 FKDKAQKLHKKIGLRINPSVS--YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH 164 + + N + + P L + K Sbjct: 62 INKYMPNAQLMLRIFANDNSALVALGDKYGAPLESTQALLVRAKRLGSGA---------- 111 Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFS 222 + + + + + +GGG T+ + + E + Sbjct: 112 --SDPAVIRKAVEHSRVVWDIAESLGFSLRIVDIGGGFQSTESAFEKMAVAVSSAISEAA 169 Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN------------------IKNLVIVDSS 264 EPG + TL ++ + N + Sbjct: 170 FPEQTTFIAEPGRFYARSAFTLVCKIIARRVSTTIESSKTLEMLYQNDGIYGNFMNGLIE 229 Query: 265 VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDV 323 E +P + + + T+ TG +T + G +C + D F VKIGD + ++++ Sbjct: 230 KEEFMPTLIRSKLNTTMARKTGNHTYKIWGPTCDSTDCVSRSTTFGCEVKIGDFLVYKNM 289 Query: 324 A 324 Sbjct: 290 G 290 >gi|298480535|ref|ZP_06998732.1| arginine 2-monooxygenase [Bacteroides sp. D22] gi|298273356|gb|EFI14920.1| arginine 2-monooxygenase [Bacteroides sp. D22] Length = 630 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 36/316 (11%), Positives = 96/316 (30%), Gaps = 49/316 (15%) Query: 2 IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52 + +P + L N ++ + G K ++ +K + + + + Sbjct: 56 VASPMLVRFPDILDNRIEKMSSCFKQAAEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGK 115 Query: 53 ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102 G + S E+ ++ YKD + ++ ++ Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIYLVVEKMN 175 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156 +L A++L+ + + I ++ S + + S+ G + +E+ Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKG 235 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + + ++E++ +GGG+ Sbjct: 236 LKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFKVEFVDIGGGLGVDYDGTR 295 Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252 + + ++Y I E G A+ + + L VL+ + Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETA 355 Query: 253 ENIKNLVIVDSSVEAH 268 + + + +AH Sbjct: 356 TLPEWDDEEEIAPDAH 371 >gi|291575309|gb|ADE10234.1| putative diaminopimelate decarboxylase [Actinoplanes liguriensis] Length = 406 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 55/375 (14%), Positives = 112/375 (29%), Gaps = 40/375 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 TP ++ID+ + + + G + + K G + + G S E Sbjct: 50 GTPVHVIDETDVHSRCAEYVAAF-GPGA-VCCSAKGGLLRGAARWIARDGLGCYCRSAAE 107 Query: 63 VMLGH-EKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + E+ + +++A LS ++ + S+ ++ + +++ L Sbjct: 108 LRTALDAGIRPESLALFGSGKSVADLEAALSCGAAVVIGSASEAEVVAARS-RPGQRVLL 166 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 R+ P + + + + S + GL F + + L+ Sbjct: 167 RVRPGSAQRGYGVRLNSSAALAAVATVTR---SRRLVLAGLDCSLGHRLNRFGTYESCLR 223 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 T + ++LGGG D PV F RL+ ++ S +EP E V+ Sbjct: 224 EAIGFVARLRTTVPVLNLGGGHA---ADLPVGIFAARLRAVAQVTSEGYGIEPPEVHVSP 280 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR----- 295 L + ++ VPD L G +TA + GR Sbjct: 281 GRALLGRAGITVHRVVAAGDGVIELDGDVPDCLPGA------DCAGLHTAALIGRASPAP 334 Query: 296 ----SCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYN-----INRKNWFNGINMPTIAVK 345 + GD + GD ++ Y+ P + Sbjct: 335 GRSITVRCGDATVAVAELPGDMAAGDLVALSGTGAYHQRRDVYV--------GRPAVVAV 386 Query: 346 NVDGTIKAIREFSYN 360 + + + Sbjct: 387 CGGRARTLLPRETID 401 >gi|290962894|ref|YP_003494076.1| lysine/ornithine decarboxylase [Streptomyces scabiei 87.22] gi|260652420|emb|CBG75553.1| putative lysine/ornithine decarboxylase [Streptomyces scabiei 87.22] Length = 489 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 22/224 (9%), Positives = 60/224 (26%), Gaps = 13/224 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + +P ++ ++ +N+ + + ++ A K A + L ++S Sbjct: 34 LGSPLNVLLPDQIADNVRRFRAVLDRHRLAGRICFAHKANRAGSLVRRLTTTEAALDAAS 93 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 L E+ F G + + + + ++L + Sbjct: 94 LGELRHALGSGFTGSRIMATGPKDPRFLWLAARSGACLNADGPAELEGAASLVRAHGLPR 153 Query: 119 -----GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN----GLMFHNNCEN 169 L + + D ++ + + G + Sbjct: 154 VRVLLRLSGFEAPGTRTLSRRSRFGTPVKSLHLLLDVLDRHREELEPIGVGYHLDTTSVD 213 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + L+ +E E + I +GGG + + Sbjct: 214 EKAVALEGCLRAME-ELRVRGFRPRVIDVGGGFGVNYLAHAAQW 256 >gi|119627885|gb|EAX07480.1| arginine decarboxylase, isoform CRA_l [Homo sapiens] gi|193784130|dbj|BAG53674.1| unnamed protein product [Homo sapiens] Length = 309 Score = 70.6 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 37/249 (14%) Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLCFSA 177 + + L+ + F + C+ +E+ K+ V G+ FH ++ Sbjct: 1 MVLCIATDDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQ 60 Query: 178 MLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQ 228 + + F ++ + LGGG T+ + + F E V Sbjct: 61 SIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVD 120 Query: 229 IYLEPGEAIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSV 265 I+ E G VT+ T+ +++ + I +S + Sbjct: 121 IFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVL 180 Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 ++ + Q+ + Y++ + G + D E + + +GD + F+++ Sbjct: 181 FDNICPTPILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGA 238 Query: 326 YNINRKNWF 334 Y + + F Sbjct: 239 YTVGMGSPF 247 >gi|258647760|ref|ZP_05735229.1| arginine 2-monooxygenase [Prevotella tannerae ATCC 51259] gi|260852617|gb|EEX72486.1| arginine 2-monooxygenase [Prevotella tannerae ATCC 51259] Length = 630 Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 26/264 (9%), Positives = 68/264 (25%), Gaps = 28/264 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTL----NQYMDGTTSSS 59 ++D ++ K + ++ +K + + + +Y G + S Sbjct: 67 ILD-NRIEKTAQCFNNAAKEYNFQAEHFIIYPIKVNQMRPVVEEIISHGKRYNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ +KD + + + K + A Sbjct: 126 KPELHAVIATNMDSDSPIICNGHKDQNFIELALLAQKMGKRVFLVIEKLPELAIIARTAE 185 Query: 119 GLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMF 163 L + P+ S + S+ G + +++ + + F Sbjct: 186 KLGVRPNLGIRIKLASSGAGKWEESGGDASKFGLNSSELLKALQLLNEMNMRDCLKLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + S + I+++ GGG+ + + Sbjct: 246 HIGSQITKIRRISTALREAAQFYVQLRSLGFDIQFVDCGGGLGVDYDGTRSSNSASSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTL 244 ++Y +A N Sbjct: 306 SIQEYVNDCVYTFVDAANKNNIPH 329 >gi|167764115|ref|ZP_02436242.1| hypothetical protein BACSTE_02498 [Bacteroides stercoris ATCC 43183] gi|167698231|gb|EDS14810.1| hypothetical protein BACSTE_02498 [Bacteroides stercoris ATCC 43183] Length = 630 Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 92/313 (29%), Gaps = 49/313 (15%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ + G K ++ +K + + + + Sbjct: 59 PMLVRFPDILDNRIEKISCCFRQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ ++ YKD + ++ +++L Sbjct: 119 LGLEAGSKPELHAVIAINMDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELK 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IK 156 A++L+ K + I ++ S + + S+ G + +E+ Sbjct: 179 LIAKMAKQLNVKPNIGIRIKLASSGSGKWEDSGGDASKFGLSSSELLEALDFMASKGMQD 238 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + + + + +E++ +GGG+ + Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHNMGFNVEFVDIGGGLGVDYDGTRSSN 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G A+ + + L VL+ + Sbjct: 299 SEGSVNYSIQEYVNDSISTLVDASDKNGIPHPNIITESGRALTAHHSVLIFEVLETTNLP 358 Query: 256 KNLVIVDSSVEAH 268 + + + H Sbjct: 359 EWDDDEEVTENDH 371 >gi|237716693|ref|ZP_04547174.1| arginine decarboxylase [Bacteroides sp. D1] gi|262405469|ref|ZP_06082019.1| arginine decarboxylase [Bacteroides sp. 2_1_22] gi|294809666|ref|ZP_06768356.1| arginine 2-monooxygenase [Bacteroides xylanisolvens SD CC 1b] gi|229442676|gb|EEO48467.1| arginine decarboxylase [Bacteroides sp. D1] gi|262356344|gb|EEZ05434.1| arginine decarboxylase [Bacteroides sp. 2_1_22] gi|294443151|gb|EFG11928.1| arginine 2-monooxygenase [Bacteroides xylanisolvens SD CC 1b] gi|295086234|emb|CBK67757.1| arginine decarboxylase [Bacteroides xylanisolvens XB1A] Length = 630 Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 36/316 (11%), Positives = 95/316 (30%), Gaps = 49/316 (15%) Query: 2 IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52 + +P + L N ++ + G K ++ +K + + + + Sbjct: 56 VASPMLVRFPDILDNRIEKMSSCFKQAAEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGK 115 Query: 53 ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102 G + S E+ ++ YKD + ++ ++ Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIYLVVEKMN 175 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156 +L A++L+ + + I ++ S + + S+ G + +E+ Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKG 235 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + + +E++ +GGG+ Sbjct: 236 LKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFVDIGGGLGVDYDGTR 295 Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252 + + ++Y I E G A+ + + L VL+ + Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETA 355 Query: 253 ENIKNLVIVDSSVEAH 268 + + + +AH Sbjct: 356 TLPEWDDEEEIAPDAH 371 >gi|87300759|ref|ZP_01083601.1| arginine decarboxylase [Synechococcus sp. WH 5701] gi|87284630|gb|EAQ76582.1| arginine decarboxylase [Synechococcus sp. WH 5701] Length = 653 Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 82/295 (27%), Gaps = 48/295 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + L + L+ + A + A +KC + + L + Sbjct: 71 PLLIRFDDILEDRLERLHAAFERAIAQYGYAGRYQGVFPVKCNQQRHVVEQLVESGRQWH 130 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ E YKD + + ++ Sbjct: 131 FGLEAGSKAELLIALSLVDDPEALLICNGYKDQRYIETAILARRLGRQPVVVIEQPDEVE 190 Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIK 156 + +++L + + S S ++ G D + + Sbjct: 191 RIITASRELGAAPLIGVRAKLASRSTGRWGSSVGERAKFGLSVPDLLATVEALRQADLLG 250 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + L FH + L+ I + + ++ +GGG+ Sbjct: 251 ELRLLHFHVGSQINDIAVLKDALQEAGQIYVQLAELGAPMGYLDVGGGLGIDYDGSRTAT 310 Query: 208 ----DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDI 251 +Y ++++ + + E G AI ++ + L VL Sbjct: 311 AASTNYSLQNYANDVVATVRECCEPRSVPLPTLVSESGRAIASHFSVLVFDVLGT 365 >gi|126347857|emb|CAJ89577.1| putative decarboxylase [Streptomyces ambofaciens ATCC 23877] Length = 498 Score = 70.2 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 26/232 (11%), Positives = 63/232 (27%), Gaps = 20/232 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYM---DGTT 56 + +P ++ + + N + + + + ++ A K + + L G Sbjct: 32 LGSPLNVLLPETIAENAERFRAVYRRHHLTGRVYFAHKANRSSALLRRLAAEDPAHVGVD 91 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--- 112 +S E+ F G+ + T+ +++ +L++ + + Sbjct: 92 VASPAELRHALGCGFTGDRIMATGPKDPEFLWLAARVGATVNLDSLRELDQLAELVRTYG 151 Query: 113 --KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFH 164 + + L SV SR G ++ +E V Sbjct: 152 LGRADVLVRLSGFESVDGHGGAGTRLLSRRSRFGTPVREVETVLSAVERHADAVTLTGLA 211 Query: 165 NNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + L+ E I +GGG + Sbjct: 212 YHLDTTGLAEKGRALERCVLLMDECRARGLAPRAIDIGGGFGVGYVADAEEW 263 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 13/111 (11%) Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN------ 284 +EPG A+ VLD+ + + + D L + + P Sbjct: 344 IEPGRALADQCGLSLARVLDVRPTGEGPDQYLVRLGMNAGDVSLEEHGVLVDPVLLPRGG 403 Query: 285 -----TGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYNI 328 GP + G CL D+ F + + GD ++F + AGY + Sbjct: 404 PEDGGQGPVGVHLVGNLCLEADLITRRLVFLPALPRAGDLLAFVNTAGYAM 454 >gi|33864414|ref|NP_895974.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9313] gi|48474352|sp|Q7TUJ9|SPEA_PROMM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|33641194|emb|CAE22324.1| Orn/DAP/Arg decarboxylases family 2:Arginine decarboxylase [Prochlorococcus marinus str. MIT 9313] Length = 648 Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 92/319 (28%), Gaps = 51/319 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + L + L+ + A K A +KC + + L + Sbjct: 69 PLLIRFDDILEDRLERLHSAFEEAISKYGYAGRYQGVFPVKCNQQRHVVEQLVESGRQWH 128 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ E YKD + + ++ Sbjct: 129 FGLEAGSKAELLIALSLVNDPEALLICNGYKDQRYIETAILARRLGRQPVVVIEQPDEVE 188 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156 + +Q+L L + ++ + ++ G D + + Sbjct: 189 RIIRSSQELGAAPFLGVRAKLTTRSTGHWSSSVGEKAKFGLSVPDLLATVEALRQADLLS 248 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK------ 207 ++ L FH + L+ + E + ++ +GGG+ Sbjct: 249 DLRLLHFHIGSQINDIAVLKDALQEAAQIYVELTKLGAPMGYLDVGGGLGVDYDGSRSAS 308 Query: 208 ----DYPVKDFCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLD---ISE 253 +Y ++++ + + + E G AI ++ + L VL + Sbjct: 309 AASTNYSLQNYANDVVATVRECCKPHGITLPILVSESGRAIASHFSILVFDVLGTGTVPG 368 Query: 254 NIKNLVIVDSSVEAHVPDY 272 I + + ++ + Sbjct: 369 AIPKQTVEEPLTIHNLRET 387 >gi|53711530|ref|YP_097522.1| arginine decarboxylase [Bacteroides fragilis YCH46] gi|60679791|ref|YP_209935.1| arginine decarboxylase [Bacteroides fragilis NCTC 9343] gi|253564410|ref|ZP_04841867.1| biosynthetic arginine decarboxylase [Bacteroides sp. 3_2_5] gi|265764924|ref|ZP_06093199.1| arginine decarboxylase [Bacteroides sp. 2_1_16] gi|81317136|sp|Q5LIQ3|SPEA_BACFN RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|81383885|sp|Q64ZT8|SPEA_BACFR RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|52214395|dbj|BAD46988.1| putative arginine decarboxylase [Bacteroides fragilis YCH46] gi|60491225|emb|CAH05973.1| putative arginine decarboxylase [Bacteroides fragilis NCTC 9343] gi|251948186|gb|EES88468.1| biosynthetic arginine decarboxylase [Bacteroides sp. 3_2_5] gi|263254308|gb|EEZ25742.1| arginine decarboxylase [Bacteroides sp. 2_1_16] gi|301161256|emb|CBW20794.1| putative arginine decarboxylase [Bacteroides fragilis 638R] Length = 630 Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 91/306 (29%), Gaps = 46/306 (15%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ + G K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTAYCFKQASEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + ++ +++L A+ Sbjct: 126 KPELHAVIAVNTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELKLIARMAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163 +L+ + + I ++ S + + S+ G + +E+ + + F Sbjct: 186 QLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKGMKDCLKLIHF 245 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + + + +E++ +GGG+ + Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHAMGFNVEFVDIGGGLGVDYDGTRSSSSESSVNY 305 Query: 221 FSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 ++Y I E G A+ + + L VL+ + + + Sbjct: 306 SIQEYVNDSISTLVDASDKNGIPHPNIITESGRALTAHHSVLIFEVLETATLPQWDDEEE 365 Query: 263 SSVEAH 268 + +AH Sbjct: 366 IAPDAH 371 >gi|255010138|ref|ZP_05282264.1| arginine decarboxylase [Bacteroides fragilis 3_1_12] gi|313147936|ref|ZP_07810129.1| biosynthetic arginine decarboxylase [Bacteroides fragilis 3_1_12] gi|313136703|gb|EFR54063.1| biosynthetic arginine decarboxylase [Bacteroides fragilis 3_1_12] Length = 630 Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 92/306 (30%), Gaps = 46/306 (15%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ + G K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTAYCFKQASEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + ++ +++L A+ Sbjct: 126 KPELHAVIAVNTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELKLIARMAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163 +L+ + + I ++ S + + S+ G + +E+ + + F Sbjct: 186 QLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKGMKDCLKLIHF 245 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + + + ++E++ +GGG+ + Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHAMGFKVEFVDIGGGLGVDYDGTRSSSSESSVNY 305 Query: 221 FSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 ++Y I E G A+ + + L VL+ + + + Sbjct: 306 SIQEYVNDSISTLVDASDKNGIPHPNIITESGRALTAHHSVLIFEVLETATLPEWDDEEE 365 Query: 263 SSVEAH 268 + +AH Sbjct: 366 IAPDAH 371 >gi|68070711|ref|XP_677267.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium berghei strain ANKA] gi|56497314|emb|CAH99787.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase, putative [Plasmodium berghei] Length = 1142 Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 98/314 (31%), Gaps = 19/314 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I T I+ QK+L V A+K + L +S+ Sbjct: 738 IDTSVICINLQKILLQYIRFKRNLPR--VTPFYAVKSNDDEVVLKFLYGLNCSFDCASIG 795 Query: 62 E---VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKK 117 E ++ + Y K + I T +++ K Sbjct: 796 EINKLITLLPNISTDRIIYANTIKSPASLKYAKEKN-INLCTFDNIDELKKICKYHPTCS 854 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + LRIN K ++ EK + N+ G+ FH K+ F Sbjct: 855 LLLRINIDFKNYKSYMSSKYGANEYEWEKILKFGKENNMNIIGVSFHVGSNTKNIFDFCQ 914 Query: 178 MLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 +K + F + E +++GGG YP + K+ EK+ + E Sbjct: 915 AIKLSREVFNISHRLGYKFEILNMGGG-------YPEELEYDFAKKNEEKHYCTLNEEEL 967 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294 + + + +V+ + N N + ++ + D+ + + P MV Sbjct: 968 KKYIMSFL-NEKSVIKKNYNFYNFEKIALAINMSI-DHYFKDIKDQLRIISEPGRYMVAS 1025 Query: 295 RSCLAGDIFGEFHF 308 S LA + G+ Sbjct: 1026 SSTLAAKVIGKRCP 1039 >gi|254432871|ref|ZP_05046574.1| arginine decarboxylase [Cyanobium sp. PCC 7001] gi|197627324|gb|EDY39883.1| arginine decarboxylase [Cyanobium sp. PCC 7001] Length = 655 Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 95/343 (27%), Gaps = 48/343 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + L+ + A + + +KC + + L + Sbjct: 66 PLLIRFDDILEDRLERLHAAFERAIAQYGYTGRYQGVFPVKCNQQRHVVEQLVESGRRWH 125 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ E YKD + + ++ Sbjct: 126 FGLEAGSKAELLIALSLVDDPEALLICNGYKDRRYIETAILARRLGRQPVVVIEQADEVE 185 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIES--------EIK 156 + +++L + + +S ++ G D + + + Sbjct: 186 RIIHASRELGAAPLIGVRAKLSSRSTGRWGSSVGERAKFGLSVPDLLATVEALRQAGLLP 245 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD------- 206 + L FH + L+ + +G + ++ +GGG+ Sbjct: 246 ELRLLHFHIGSQINDIAVLKDALQEAGQIYGELTRLGAPMGYLDVGGGLGIDYDGSRTAT 305 Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ + + + E G AI ++ + L VL + Sbjct: 306 AASKNYSLQNYANDVVATVRECCEPHGVPLPTLVSESGRAIASHFSVLIFDVLGTAGPPA 365 Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + V + V + + C A Sbjct: 366 AVPAVQAEEPLMVRNLRDTFATIHATAEATAQATAEGATCCDA 408 >gi|302416511|ref|XP_003006087.1| ornithine decarboxylase [Verticillium albo-atrum VaMs.102] gi|261355503|gb|EEY17931.1| ornithine decarboxylase [Verticillium albo-atrum VaMs.102] Length = 165 Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 3/80 (3%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ + VK A+KC + + L G +S +E+ Sbjct: 73 FFVADLGEVYR--QHMRWKLNLPRVKPFYAVKCNPDPRVIELLAALGTGFDCASKWEIDQ 130 Query: 66 GH-EKFGGETHAYNVAYKDC 84 E Y K Sbjct: 131 ILNMGLAPERIIYAQPCKTN 150 >gi|256833745|ref|YP_003162472.1| Orn/DAP/Arg decarboxylase 2 [Jonesia denitrificans DSM 20603] gi|256687276|gb|ACV10169.1| Orn/DAP/Arg decarboxylase 2 [Jonesia denitrificans DSM 20603] Length = 1072 Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 48/416 (11%), Positives = 101/416 (24%), Gaps = 92/416 (22%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P + + L N+ + G++ + +A K + + G +S Sbjct: 620 GSPLNIHNFDPLTRNITELTNTASHHGIRFAVYVARKANKTLNLVTAAHTQGAGIDVAST 679 Query: 61 YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL---- 114 E+ G ++ A I L N TI + + + + A L Sbjct: 680 RELRQTLAAGVPGPRIVFSAAIKTRDAITDALRNNVTISLDNLDEAHLVTTTAHTLGLTA 739 Query: 115 HKKIGLRINPSVSYSK------------------FILADPNRPFSRLGEKCKDKIESEIK 156 H L I ++ F G ++ + Sbjct: 740 HIAFRLAITDPHIAPTRFGLPATDWLTWLTTTNHTHISVDGLHFHLNGYSATERATALRH 799 Query: 157 NVN----------------------GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194 + N + F E ++ Sbjct: 800 AITTIDDLRARGCPASFIDMGGGVPMSYLDNGEQWHQFWAAVDRQPASSCEVTWRGDRLG 859 Query: 195 WISLGGGIHFT--DKDYPVKDFCQRLKEF----------------------------SEK 224 + G Y + L+ Sbjct: 860 LVDAGADRPSPSVYPYYQDVVRGEWLENIVTSPVAAPTVHDGHGSDRPTPDTTIADALAS 919 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN----------IKNLVIVDSSVEAHVPDYLL 274 +++ EPG +++ V+ + + +SV+ V L+ Sbjct: 920 RDIELRCEPGRSMLDGCGMTLARVMFRKHTSDGVPLVGLAMNRTQVRSTSVDFLVDPVLV 979 Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHF--EKPVKIGDRISFEDVAGYNI 328 A P + G C+ ++ F + V +GD ++F + GY + Sbjct: 980 RPTDAG--EPNEPGSGFFVGAYCIEEELLARRRFVFPQGVAVGDIVAFPNTGGYLM 1033 >gi|73974222|ref|XP_858383.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 3 [Canis familiaris] gi|73974231|ref|XP_858568.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 6 [Canis familiaris] Length = 280 Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 75/241 (31%), Gaps = 25/241 (10%) Query: 132 ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT 191 + R +C +++ +I V + E++ ++ + + + G F Sbjct: 1 MKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARCVFDMAGEFGF 60 Query: 192 QIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 + + +GGG + V L F E ++I EPG V++ TL + Sbjct: 61 TMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYVSSAFTLAVNI 120 Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQE----------------------SATIYPNTG 286 + + +Y + Sbjct: 121 IAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGIYGSFASKLSEDLNTIPEVHKKYKKDEP 180 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 +T+ + G SC D E + +GD + F+++ +++ + FN P I Sbjct: 181 LFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAFNDFQRPAIYYMM 240 Query: 347 V 347 Sbjct: 241 S 241 >gi|146305762|ref|YP_001186227.1| arginine decarboxylase [Pseudomonas mendocina ymp] gi|145573963|gb|ABP83495.1| arginine decarboxylase [Pseudomonas mendocina ymp] Length = 637 Score = 70.2 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 84/298 (28%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + +L L +K + + + Sbjct: 70 PLLVRFPDILQDRVRRLTGAFDASIARLDYQSRYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E++ YKD E + + N + K Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVRLV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A S + AD S+ G ++ + + Sbjct: 190 IEEAADLKVAPQIGLRVRLSSLASSKWADTGGEKSKFGLSAAQILQVVERFKAAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + + + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANIADYRKGFREAIRYYGELRAMGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++D+ + + +++ I+ E G A+ + L V D+ + Sbjct: 310 SINYDMQDYADAVVDMLKEFCDRQEIPHPHIFSESGRAMTAHHAVLLVQVTDVERHND 367 >gi|160888524|ref|ZP_02069527.1| hypothetical protein BACUNI_00941 [Bacteroides uniformis ATCC 8492] gi|270294889|ref|ZP_06201090.1| arginine decarboxylase [Bacteroides sp. D20] gi|317477883|ref|ZP_07937068.1| arginine decarboxylase [Bacteroides sp. 4_1_36] gi|156861838|gb|EDO55269.1| hypothetical protein BACUNI_00941 [Bacteroides uniformis ATCC 8492] gi|270274136|gb|EFA19997.1| arginine decarboxylase [Bacteroides sp. D20] gi|316905956|gb|EFV27725.1| arginine decarboxylase [Bacteroides sp. 4_1_36] Length = 630 Score = 69.8 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 94/336 (27%), Gaps = 49/336 (14%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ G K ++ +K + + + + Sbjct: 59 PVLVRFPDILDNRIEKVSCCFRQAADEYGYKGENFIIYPIKVNQMRPVVEEMINHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ + YKD + ++ +++LN Sbjct: 119 LGLEAGSKPELHAVIGVNTDPGSLVVCNGYKDESFIELALLAQKMGKRIFLVVEKLNELN 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156 A++L K + I ++ S + + S+ G + +E+ Sbjct: 179 LIAKMAKQLKVKPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLEKKDMKD 238 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + L+ + F IE++ GGG+ Sbjct: 239 CLKLIHFHIGSQITKIRRIKNALREASQFFVQLNKMGFNIEFVDTGGGMGVDYDGTRSSS 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G ++ + + L VL+ + Sbjct: 299 SESSVNYSIQEYVNDVVSTFVDVADKHGFPHPNIITETGRSLTAHHSVLIFEVLETASLP 358 Query: 256 KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291 + + +AH LY + + Sbjct: 359 EMDDDWEPGEDAHELVKELYDIWDNLSQRSMLEPWH 394 >gi|329954135|ref|ZP_08295230.1| arginine 2-monooxygenase [Bacteroides clarus YIT 12056] gi|328528112|gb|EGF55092.1| arginine 2-monooxygenase [Bacteroides clarus YIT 12056] Length = 630 Score = 69.8 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 92/313 (29%), Gaps = 49/313 (15%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ + G K ++ +K + + + + Sbjct: 59 PMLVRFPDILDNRIEKISCCFRQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ ++ YKD + ++ +++L Sbjct: 119 LGLEAGSKPELHAVIAINMDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKLNELK 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IK 156 A++L+ K + I ++ S + + S+ G + +E+ Sbjct: 179 LIAKMAKQLNVKPNIGIRIKLASSGSGKWEDSGGDASKFGLSSSELLEALDFMADKGMQD 238 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + + + ++E++ +GGG+ + Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFKVEFVDIGGGLGVDYDGTRSSN 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G A+ + + L VL+ + Sbjct: 299 SEGSVNYSIQEYVNDSISTLVDASDKNGIPHPNIITESGRALTAHHSVLIFEVLETTNLP 358 Query: 256 KNLVIVDSSVEAH 268 + + + H Sbjct: 359 EWDDEEEVTENDH 371 >gi|30314892|emb|CAD32231.1| MccE protein [Escherichia coli] Length = 521 Score = 69.8 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 34/336 (10%), Positives = 84/336 (25%), Gaps = 24/336 (7%) Query: 44 MFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ 103 M ++ S+ E+ L K E+ + I + + + Sbjct: 1 MVQIISGKGLYAEVCSVDEMNLAKRDGFNRIVFDGPLKKTSELLKAIEIGALIEVDNIDE 60 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMF 163 + + + + + S Y + + +SE ++G Sbjct: 61 CKRLNELCKLHKLTCRIHLRLSHYYDDNLSRFGLSESEAINLLEMLISKSEYLILDGFDL 120 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQ 216 H + + + ++ ++LG GI + + F Sbjct: 121 HVGSNLPNAEKICKAVIQYHELILRYMPDDGTLNLGSGIPADSFSASSDNPTPCPEVFFS 180 Query: 217 RLKEFSEKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP 270 + + + EPG +V + V+ V + +P Sbjct: 181 SIYDTIKNCFGTVCDKWNYIFEPGRHLVEDFGYFIGKVISTKNRYGVKVAQTNIGINWIP 240 Query: 271 DYLLYQE------SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS-FEDV 323 + + + ++ G +C D + D + Sbjct: 241 SIRNWDHSFTLFHNHNHISDDKSDEYIIAGFNCFECDCLFPSVILPS-NLSDYLFSVRGC 299 Query: 324 AGYNINRKNWFNGINMPTIAVKNVD--GTIKAIREF 357 Y++ N + N+ + D + R Sbjct: 300 GAYDMQTGNQW-TRNLYAVYTITNDVVNISRIHRRE 334 >gi|284040362|ref|YP_003390292.1| Orn/DAP/Arg decarboxylase 2 [Spirosoma linguale DSM 74] gi|283819655|gb|ADB41493.1| Orn/DAP/Arg decarboxylase 2 [Spirosoma linguale DSM 74] Length = 494 Score = 69.8 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 56/408 (13%), Positives = 112/408 (27%), Gaps = 55/408 (13%) Query: 3 KTPYYLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDG 54 TP L K+ ++D K K K + D + + Sbjct: 41 GTPLKLTYLPKITEHIDHAKLLFKNAMKRYNYKGNYTYCYCTKSSHFRFVLDEVLKNNVH 100 Query: 55 TTSSSLYEVMLGHEKFGGET------HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108 +SS Y++ + E + E N + + + N + L+ K Sbjct: 101 LETSSAYDIQIIRELYKAEKVSKSTYIICNGYKRPLYTQYISELLNEGFTNCIPVLDNLK 160 Query: 109 DKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNG 160 + + +N + + + SRLG + D +E + Sbjct: 161 EIEAYENSVTAETVNFGIRIATDEEPNFAFYTSRLGIRYSDVNELYRSKIQPNEKFKLKM 220 Query: 161 LMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 L F N K + + E ++ + +GGG+ D+ Sbjct: 221 LHFFINTGIKDSAYYWSELSRFMYKYCELRKMCPDLDSVDIGGGMPIQTSFQFTYDYQAM 280 Query: 218 LKEFSEKYSVQI----------YLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSV 265 + + E + E G V + + V+D + + + ++D S Sbjct: 281 IDQIVESIQWICNKNNVPVPHIFTEFGSYTVGESGAVIYKVIDQKLQNDKELWYMIDGSF 340 Query: 266 EAHVPDYL-LYQESATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPV--------K 313 +PD L Q+ + N + G +C + D + + Sbjct: 341 ITQLPDSWGLGQKYIMLSVNNWENPYQKVNLGGLTCDSHDFYNTEAHSADLYLPIFDQDT 400 Query: 314 IGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAIRE 356 I Y + + G I P + + D Sbjct: 401 EDQYIGLFHTGAYQESLG-GYGGIQHCLIPAPQHVIVDKDDEGNLRTR 447 >gi|329964488|ref|ZP_08301542.1| arginine 2-monooxygenase [Bacteroides fluxus YIT 12057] gi|328524888|gb|EGF51940.1| arginine 2-monooxygenase [Bacteroides fluxus YIT 12057] Length = 630 Score = 69.4 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 93/313 (29%), Gaps = 49/313 (15%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ + G K ++ +K + + + + Sbjct: 59 PMLVRFPDILDNRIEKISCCFKQASEEYGYKAENFIIYPIKVNQMRPVVEEIISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ ++ YKD + ++ +++L Sbjct: 119 LGLEAGSKPELHAVIATNMDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELK 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156 A++L K L I ++ S + + S+ G + +E+ Sbjct: 179 LIAKMAKRLGVKPNLGIRIKLASSGSGKWEDSGGDASKFGLSSSELLEALDYLVEKNMQD 238 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + L+ + ++E++ +GGG+ + Sbjct: 239 CLKLIHFHIGSQITKIRRIKTALREASQFYVQLHAMGFKVEFVDVGGGLGVDYDGTRSSN 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G A+ + + L VL+ + Sbjct: 299 SEGSVNYSIQEYVNDSISTLVDASDKNGIPHPNIITESGRALTAHHSVLIFEVLETATLP 358 Query: 256 KNLVIVDSSVEAH 268 + + + E H Sbjct: 359 EWDDEEEVTKEDH 371 >gi|153809143|ref|ZP_01961811.1| hypothetical protein BACCAC_03453 [Bacteroides caccae ATCC 43185] gi|149128119|gb|EDM19339.1| hypothetical protein BACCAC_03453 [Bacteroides caccae ATCC 43185] Length = 630 Score = 69.4 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 93/313 (29%), Gaps = 49/313 (15%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ + G K ++ +K + + + + Sbjct: 59 PTLVRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ ++ YKD + ++ +++L Sbjct: 119 LGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKMNELK 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156 A++L+ + + I ++ S + + S+ G + +E+ Sbjct: 179 LIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFMESKGLKD 238 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + + + ++E++ +GGG+ + Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHAMGFKVEFVDIGGGLGVDYDGTRSSN 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G A+ + + L VL+ + Sbjct: 299 SEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETATLP 358 Query: 256 KNLVIVDSSVEAH 268 + + +AH Sbjct: 359 EWDDEEVIAPDAH 371 >gi|299142275|ref|ZP_07035408.1| arginine 2-monooxygenase [Prevotella oris C735] gi|298576364|gb|EFI48237.1| arginine 2-monooxygenase [Prevotella oris C735] Length = 630 Score = 69.4 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 29/264 (10%), Positives = 72/264 (27%), Gaps = 28/264 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ + K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTFSCFQKAKAEYNFKAENFIIYPIKVNQMQPVVEEIISHGQKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++L+ A+ Sbjct: 126 KPELHAVIAVQCKSDSLIICNGYKDESYIELALLAQKMGKRIFIVVEKLNELDIIARAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IKNVNGLMF 163 KL+ K L I ++ S + S+ G + +++ + + F Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSAELLQALEKLDAMGMHDCLRLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + I+++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALREAAQFYVNLHKMGYNIDFVDCGGGLGVDYDGTRSSSSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTL 244 ++Y +A N Sbjct: 306 SIQEYVNDCVYTFVDAADKNNIQH 329 >gi|317504275|ref|ZP_07962265.1| arginine 2-monooxygenase [Prevotella salivae DSM 15606] gi|315664645|gb|EFV04322.1| arginine 2-monooxygenase [Prevotella salivae DSM 15606] Length = 630 Score = 69.4 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 30/260 (11%), Positives = 73/260 (28%), Gaps = 28/260 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ ++ K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTFSCFQKAKREYDYKAENFIIYPIKVNQMQPVVEEIISHGQKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++L+ A+ Sbjct: 126 KPELHAVIAVQCKSDSLIICNGYKDESYIELAMLAQKMGKRIFIVVEKLNELDIIAHAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IKNVNGLMF 163 KL+ K L I ++ S + S+ G + +E+ + + F Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLEALDKLDAMGMHDCLRLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + I+++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALREAAQFYVNLHKMGFNIDFVDCGGGLGVDYDGTRSSSSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTN 240 ++Y +A N Sbjct: 306 SIQEYVNDCVYMFVDAANKN 325 >gi|160947191|ref|ZP_02094358.1| hypothetical protein PEPMIC_01124 [Parvimonas micra ATCC 33270] gi|158446325|gb|EDP23320.1| hypothetical protein PEPMIC_01124 [Parvimonas micra ATCC 33270] Length = 353 Score = 69.4 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 114/359 (31%), Gaps = 45/359 (12%) Query: 8 LIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 + L N + I+ V++L A+K + + T+ + G +S E L Sbjct: 26 CYNLDLLNNIIRGLKEDIKAIKNVEILYAVKSNSDKEILKTIYENNIGFDIASEEEFNLL 85 Query: 67 HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126 + + + I L + + FN+ QL F + KIG+R+N + Sbjct: 86 KFNTSSISIT-GPDFNNLFIKKCLDSNISFDFNSKIQLVNFFREYAHCFNKIGVRLNVN- 143 Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 SR G D E +N + H ++ Sbjct: 144 -------------GSRFGFVEDDFSFLEKFVINRIHVHYGNKDIQNTKEVLKYLTYCIFN 190 Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS------EKYSVQIYLEPGEAIVTN 240 + I+ I+LGGGI + +F L+ F +++ LEPG+ I Sbjct: 191 YKVFSNIDSINLGGGIENIYINQSKYEFFDILENFRVNISKKLNRDIRLILEPGDLISGF 250 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +N +++ +++ + I + L+Y E T + G SC G Sbjct: 251 IGFVNPRIIEYNKDFIIINISRLNFSPWKDIRLVYPER------KIGRTFNIFGNSCFEG 304 Query: 301 DIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWFN------GINMPTIAVKNVDGTIK 352 D F + F+ + F FN P I + Sbjct: 305 DYFCDSKIFDYDKN---LVLFP-------VSSYNFNVERTIHNRKSPNIIYYRCGKFYE 353 >gi|288928661|ref|ZP_06422507.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 317 str. F0108] gi|288329645|gb|EFC68230.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 317 str. F0108] Length = 630 Score = 69.4 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 28/260 (10%), Positives = 76/260 (29%), Gaps = 28/260 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ + G K ++ +K + + + + G + S Sbjct: 67 ILD-SRIEKTASCFRQAAEEYGYKGENFVIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + ++ +++L A+ Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFLVIEKLNELELIARAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163 KL+ + L I ++ S + + S+ G + +++ + + F Sbjct: 186 KLNVRPNLGIRIKLASSGSGKWEESGGDASKFGLTSSELLQALELLDQKGLRDCLKLIHF 245 Query: 164 HNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + L+ + ++++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALREASQFYVQLHKMGYDVDFVDCGGGLGVDYDGTRSPSSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTN 240 ++Y +A N Sbjct: 306 SIQEYVNDCIYTFVDAANKN 325 >gi|326794767|ref|YP_004312587.1| arginine decarboxylase [Marinomonas mediterranea MMB-1] gi|326545531|gb|ADZ90751.1| arginine decarboxylase [Marinomonas mediterranea MMB-1] Length = 630 Score = 69.4 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 36/294 (12%), Positives = 81/294 (27%), Gaps = 50/294 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIR--------KNAGVKLLLALKCFAAWGMFDTL------NQ 50 P + L + ++ A ++ +K + + + N Sbjct: 58 PCLVRFPDILHSRIERITQSFCDAIDHYQYKADYAIVYPIKVNQQRRVVEEITSCRPDNA 117 Query: 51 YMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQ 103 G + S E+M + YKD E + + + ++ + Sbjct: 118 SKVGLEAGSKPELMAVLAMHQSADGIIVCNGYKDKEFIHLALMAEKMGHQVFLVVEKFHE 177 Query: 104 LNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI------- 155 L ++A++L + I S + S+ G + S Sbjct: 178 LEWIIEEAKRLDVSPRIGIRIRLASTCSTHWGNSGGEKSKFGLTTSQLLRSVQLLKNQNM 237 Query: 156 -KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK---- 207 + + FH + LK + + I+W+ +GGG+ + Sbjct: 238 VHCLELIHFHLGSQITRIRDIQNSLKECARYYSELHLMGVNIQWVDVGGGLGVDYEGTRS 297 Query: 208 ------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTV 248 +Y + ++ + I E G A+ + + V Sbjct: 298 QSAYSANYSISEYANNVVFAFHNICEQYNLPHPHIISESGRAVTAHHAMIIADV 351 >gi|288800991|ref|ZP_06406447.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 299 str. F0039] gi|288331925|gb|EFC70407.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 299 str. F0039] Length = 630 Score = 69.4 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 34/274 (12%), Positives = 77/274 (28%), Gaps = 31/274 (11%) Query: 2 IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52 + TP L L N ++ +K K ++ +K + + + + Sbjct: 56 VTTPVLLRFPDILDNRIEQTASCFQQAKKEYDYKAENFIIYPIKVNQMQPVVEEIISHGR 115 Query: 53 ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102 G + S E+ ++ YKD + I+ ++ Sbjct: 116 KFNLGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVIEKLN 175 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES-------- 153 +L A+KL+ K L I ++ S + + S+ G + +E+ Sbjct: 176 ELEIIAKAAKKLNVKPNLGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALRILDEKG 235 Query: 154 EIKNVNGLMFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 ++ + FH + ++++ GGG+ Sbjct: 236 LHNSLRLIHFHIGSQITKIRRIQTALREAAQFYINLHKMGYNVDFVDCGGGLGVDYDGTR 295 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244 + ++Y +A N Sbjct: 296 SPSSESSVNYTIQEYVNDCVYTFVDAANKNNIQH 329 >gi|281424869|ref|ZP_06255782.1| arginine 2-monooxygenase [Prevotella oris F0302] gi|281400987|gb|EFB31818.1| arginine 2-monooxygenase [Prevotella oris F0302] Length = 630 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 28/256 (10%), Positives = 71/256 (27%), Gaps = 28/256 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ + K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTFSCFQKAKAEYNFKAENFIIYPIKVNQMQPVVEEIISHGQKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++L+ A+ Sbjct: 126 KPELHAVIAVQCKSDSLIICNGYKDESYIELALLAQKMGKRIFIVVEKLNELDIIARAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IKNVNGLMF 163 KL+ K L I ++ S + S+ G + +++ + + F Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSAELLQALEKLDAMGMHDCLRLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + I+++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALREAAQFYVNLHKMGYNIDFVDCGGGLGVDYDGTRSSSSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEA 236 ++Y +A Sbjct: 306 SIQEYVNDCVYTFVDA 321 >gi|238059755|ref|ZP_04604464.1| decarboxylase [Micromonospora sp. ATCC 39149] gi|237881566|gb|EEP70394.1| decarboxylase [Micromonospora sp. ATCC 39149] Length = 502 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 22/224 (9%), Positives = 61/224 (27%), Gaps = 13/224 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + +P ++ ++ +N + ++ + A K + L +S Sbjct: 32 LGSPLNVVLPNQIADNAAAFQSVYTGHHLRGEVFFAHKANRSAAFVRRLAATPAAIDVAS 91 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 L E+ F + + T+ ++ ++L++ ++ + Sbjct: 92 LGELQHALGAGFAPDRVMATGPKTAEFLWLAARCGITVNLDSPAELDELVSLVRRHALRP 151 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172 +R+ +S + SR G + I V + + + Sbjct: 152 -VRVLLRLSSFTSAGSTILSRPSRFGTPVAEVDALLARIAGARDAVELIGVAYHLDTIGL 210 Query: 173 LCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKD 213 + L+ + +GGG + Sbjct: 211 AEKATALEGCLTVLAGCHRHGLHPRIVDIGGGFGVDYLAEGDQW 254 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 12/123 (9%) Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA---------- 267 L +++ +++EPG A++ + VL++ +V + A Sbjct: 323 LATLLQEHLYDLWIEPGRALLDQCGAVLARVLEVRPTAAGPHLVRLDLNARDVSLEEHGV 382 Query: 268 HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAG 325 + LL A + G CL D+ + + ++GD ++F + AG Sbjct: 383 MMDPILLPATPAAAPSPAEGNPVYLLGNLCLEADLITRRMVYLPTLPRVGDLLAFANTAG 442 Query: 326 YNI 328 Y + Sbjct: 443 YFM 445 >gi|300727492|ref|ZP_07060883.1| arginine 2-monooxygenase [Prevotella bryantii B14] gi|299775195|gb|EFI71796.1| arginine 2-monooxygenase [Prevotella bryantii B14] Length = 630 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 30/264 (11%), Positives = 75/264 (28%), Gaps = 28/264 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ +K K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTASCFAKAKKEYDFKAENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++L A+ Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDENYIELALLAQKMGKRIFIVIEKLNELEIIARIAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163 +LH K + I ++ S + S+ G + +E+ + + F Sbjct: 186 RLHVKPNIGIRIKLASSGSGKWAESGGDASKFGLTSSELLEALNMLDEKGLHDCLRLIHF 245 Query: 164 HNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + L+ ++++ GGG+ + + Sbjct: 246 HIGSQITKIRRIQTALREASQYYINLHKMGYNVDFVDCGGGLGVDYDGTRSSNSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTL 244 ++Y +A N Sbjct: 306 SIQEYVNDCVYTFVDAANKNNIPH 329 >gi|330501723|ref|YP_004378592.1| arginine decarboxylase [Pseudomonas mendocina NK-01] gi|328916010|gb|AEB56841.1| arginine decarboxylase [Pseudomonas mendocina NK-01] Length = 637 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 87/298 (29%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRRLTGAFDASIERLEYQSRYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 G + S E++ YKD E + + N + K + A Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189 Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 + + L++ P + S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQIGLRVRLSSLASSKWADTGGEKSKFGLSAAQILSVVERFRAAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + + + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANIADYRKGFREAIRYYGELRAMGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++D+ + + +++ I+ E G A+ + L V D+ + Sbjct: 310 SINYDMRDYADAVVDMLKEFCDRQEIPHPHIFSESGRAMTAHHAVLLVQVTDVERHND 367 >gi|317493783|ref|ZP_07952200.1| arginine decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918110|gb|EFV39452.1| arginine decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 658 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 78/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A G L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLVNSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I L + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKLV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + +S + + G ++ ++ Sbjct: 207 MEEAERLNVVPRLGVRARLSSQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEH 350 >gi|255692945|ref|ZP_05416620.1| arginine 2-monooxygenase [Bacteroides finegoldii DSM 17565] gi|260621256|gb|EEX44127.1| arginine 2-monooxygenase [Bacteroides finegoldii DSM 17565] Length = 630 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 98/336 (29%), Gaps = 49/336 (14%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ + G K ++ +K + + + + Sbjct: 59 PMLVRFPDILDNRIEKMSSCFKQAAEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ ++ YKD + ++ +++L Sbjct: 119 LGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKMNELK 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156 A++L+ + + I ++ S + + S+ G + +E+ Sbjct: 179 LIAKMAKQLNVEPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKGMKD 238 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + + + ++E++ +GGG+ Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFKVEFVDIGGGLGVDYDGTRSSS 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G A+ + + L VL+ + Sbjct: 299 SEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETATLP 358 Query: 256 KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291 + + + +AH LY T+ N Sbjct: 359 EWDDEEEIAPDAHELVQELYAIWDTLNQNKMLEAWH 394 >gi|281422617|ref|ZP_06253616.1| arginine 2-monooxygenase [Prevotella copri DSM 18205] gi|281403287|gb|EFB33967.1| arginine 2-monooxygenase [Prevotella copri DSM 18205] Length = 630 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 28/261 (10%), Positives = 73/261 (27%), Gaps = 28/261 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ ++ G K ++ +K + + + + G S Sbjct: 67 ILD-NRIEKTASCFQKAKEEYGYKGENFVIYPIKVNQMQPVVEEIISHGKKFNLGLEVGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++L+ + A+ Sbjct: 126 KPELHAVIAVQAQSDSLIICNGYKDESYIELALLAQKMGKRIFIVVEKLNELDIIEKVAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IKNVNGLMF 163 KL+ K + I ++ S + S+ G + + + + + F Sbjct: 186 KLNVKPNIGIRIKLASSGSGKWAESGGDASKFGLTSAELLTALKKIDEMGFHDCLRLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + ++++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALREAAQFYISLHKMGYNVDFVDCGGGLGVDYDGTRSSSSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTNT 241 ++Y +A N Sbjct: 306 SIQEYVNDCVYTFVDAASKNN 326 >gi|22297073|gb|AAM94460.1| ornithine decarboxylase [Phaseolus vulgaris] Length = 251 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 65/236 (27%), Gaps = 10/236 (4%) Query: 35 ALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEID--AVLS 91 A+KC L +S E+ E + K A Sbjct: 2 AVKCNPEPSFLSMLAAMGSNFDCASRAEIEYVLSLGISPERIVFANPCKPESDIIFAEKV 61 Query: 92 NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI 151 + +++ ++ K K K + ++ + + E Sbjct: 62 GVNLTTYDSEDEVYKIKKHHPKCELLLRIKPMNDGNARCPMGPKY-GALPEEIEPLLRIA 120 Query: 152 ESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI--HFT 205 ++ V+G+ FH N +A + E ++++ + +GGG Sbjct: 121 QASRLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETADKFGMSKMNVLDIGGGFTSGHQ 180 Query: 206 DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV 261 + FS + + I EPG TL TT++ Sbjct: 181 FTTAATAVKSALQQHFSNEPELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYW 236 >gi|325927339|ref|ZP_08188593.1| arginine decarboxylase [Xanthomonas perforans 91-118] gi|325542340|gb|EGD13828.1| arginine decarboxylase [Xanthomonas perforans 91-118] Length = 628 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 103/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLAGHHGEGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107 G + S E+M YKD E + + T + K Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTLV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L K GL + ++ + + G + ++ ++ Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V E H+ + + G L+ G+ + + Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLPQRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|260172461|ref|ZP_05758873.1| arginine decarboxylase [Bacteroides sp. D2] gi|315920755|ref|ZP_07916995.1| biosynthetic arginine decarboxylase [Bacteroides sp. D2] gi|313694630|gb|EFS31465.1| biosynthetic arginine decarboxylase [Bacteroides sp. D2] Length = 630 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 36/316 (11%), Positives = 95/316 (30%), Gaps = 49/316 (15%) Query: 2 IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52 + +P + L N ++ + G K ++ +K + + + + Sbjct: 56 VASPMLIRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGK 115 Query: 53 ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102 G + S E+ ++ YKD + ++ ++ Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKMN 175 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156 +L A++L+ + + I ++ S + + S+ G + +E+ Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKG 235 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + + +E++ +GGG+ Sbjct: 236 MKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFVDIGGGLGVDYDGTR 295 Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252 + + ++Y I E G A+ + + L VL+ + Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETA 355 Query: 253 ENIKNLVIVDSSVEAH 268 + + + +AH Sbjct: 356 TLPEWDDEEEIAPDAH 371 >gi|114319236|ref|YP_740919.1| arginine decarboxylase [Alkalilimnicola ehrlichii MLHE-1] gi|122312750|sp|Q0ACK8|SPEA_ALHEH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|114225630|gb|ABI55429.1| arginine decarboxylase [Alkalilimnicola ehrlichii MLHE-1] Length = 628 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 83/292 (28%), Gaps = 46/292 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG-- 54 P + L + +D+ + A G + + +K + + + ++ +G Sbjct: 61 PVLVRFLDILHDRVDSLCQAFRQAMVEDGYRGGYRAVYPIKVNQQRRVVEEIIRHGNGRV 120 Query: 55 -TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVL------SNCDTIIFNTVSQLNKF 107 + S E+M YKD E + ++ S+L Sbjct: 121 GLEAGSKPELMAVLALTPPGGTVVCNGYKDREYVRLALRGRQLGLQVHLVIEKASELELV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A L L + ++ + G + + + Sbjct: 181 LEEAAALGVTPSLGMRVRLATIGAGKWQNTGGEKSKFGLTAAQALAVVDRLRAAGCLDWL 240 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + ++ + + +E + +GGG+ + Sbjct: 241 RLLHFHLGSQIPNIRDIRRGMREAARYYAELRALGAPVETVDVGGGLGVDYEGSRSRSFC 300 Query: 208 -------DYPVKDFCQRLKEFSEK--YSVQIYLEPGEAIVTNTTTLNTTVLD 250 +Y + ++ I E G A+ + L T V+D Sbjct: 301 SMNYTVAEYAHNVVHALWQVCEDEGLPHPDIITESGRAMTAHHAVLITDVID 352 >gi|160883937|ref|ZP_02064940.1| hypothetical protein BACOVA_01911 [Bacteroides ovatus ATCC 8483] gi|156110667|gb|EDO12412.1| hypothetical protein BACOVA_01911 [Bacteroides ovatus ATCC 8483] Length = 630 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 36/316 (11%), Positives = 95/316 (30%), Gaps = 49/316 (15%) Query: 2 IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52 + +P + L N ++ + G K ++ +K + + + + Sbjct: 56 VASPMLIRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGK 115 Query: 53 ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102 G + S E+ ++ YKD + ++ ++ Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKMN 175 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156 +L A++L+ + + I ++ S + + S+ G + +E+ Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKG 235 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + + +E++ +GGG+ Sbjct: 236 MKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFVDIGGGLGVDYDGTR 295 Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252 + + ++Y I E G A+ + + L VL+ + Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETA 355 Query: 253 ENIKNLVIVDSSVEAH 268 + + + +AH Sbjct: 356 TLPEWDDEEEIAPDAH 371 >gi|68066212|ref|XP_675089.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56494069|emb|CAI02605.1| hypothetical protein PB300842.00.0 [Plasmodium berghei] Length = 578 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 98/314 (31%), Gaps = 19/314 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I T I+ QK+L V A+K + L +S+ Sbjct: 27 IDTSVICINLQKILLQYIRFKRNLPR--VTPFYAVKSNDDEVVLKFLYGLNCSFDCASIG 84 Query: 62 E---VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKK 117 E ++ + Y K + I T +++ K Sbjct: 85 EINKLITLLPNISTDRIIYANTIKSPASLKYAKEKN-INLCTFDNIDELKKICKYHPTCS 143 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + LRIN K ++ EK + N+ G+ FH K+ F Sbjct: 144 LLLRINIDFKNYKSYMSSKYGANEYEWEKILKFGKENNMNIIGVSFHVGSNTKNIFDFCQ 203 Query: 178 MLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 +K + F + E +++GGG YP + K+ EK+ + E Sbjct: 204 AIKLSREVFNISHRLGYKFEILNMGGG-------YPEELEYDFAKKNEEKHYCTLNEEEL 256 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294 + + + +V+ + N N + ++ + D+ + + P MV Sbjct: 257 KKYIMSFL-NEKSVIKKNYNFYNFEKIALAINMSI-DHYFKDIKDQLRIISEPGRYMVAS 314 Query: 295 RSCLAGDIFGEFHF 308 S LA + G+ Sbjct: 315 SSTLAAKVIGKRCP 328 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 18/47 (38%) Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G+SC D+ + I D I +E Y + FNG Sbjct: 514 NIFGQSCDGLDMITSSTYLPECNINDWIIYEYTGAYTFVSSSNFNGF 560 >gi|237720425|ref|ZP_04550906.1| arginine decarboxylase [Bacteroides sp. 2_2_4] gi|293370432|ref|ZP_06616985.1| arginine 2-monooxygenase [Bacteroides ovatus SD CMC 3f] gi|299147088|ref|ZP_07040155.1| arginine 2-monooxygenase [Bacteroides sp. 3_1_23] gi|229450176|gb|EEO55967.1| arginine decarboxylase [Bacteroides sp. 2_2_4] gi|292634424|gb|EFF52960.1| arginine 2-monooxygenase [Bacteroides ovatus SD CMC 3f] gi|298514973|gb|EFI38855.1| arginine 2-monooxygenase [Bacteroides sp. 3_1_23] Length = 630 Score = 69.0 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 36/316 (11%), Positives = 95/316 (30%), Gaps = 49/316 (15%) Query: 2 IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52 + +P + L N ++ + G K ++ +K + + + + Sbjct: 56 VASPMLIRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGK 115 Query: 53 ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102 G + S E+ ++ YKD + ++ ++ Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKMN 175 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156 +L A++L+ + + I ++ S + + S+ G + +E+ Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKG 235 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + + +E++ +GGG+ Sbjct: 236 MKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFVDIGGGLGVDYDGTR 295 Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252 + + ++Y I E G A+ + + L VL+ + Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETA 355 Query: 253 ENIKNLVIVDSSVEAH 268 + + + +AH Sbjct: 356 TLPEWDDEEEIAPDAH 371 >gi|322834222|ref|YP_004214249.1| arginine decarboxylase [Rahnella sp. Y9602] gi|321169423|gb|ADW75122.1| arginine decarboxylase [Rahnella sp. Y9602] Length = 660 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 78/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L + G Sbjct: 88 PALFCFPQILQHRLRSINAAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVESGEPLG 147 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I L + ++ ++++ Sbjct: 148 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMTEIKLV 207 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + +S + + G ++ ++ Sbjct: 208 LEEAERLNVIPRLGVRARLSSQGSGKWQSSGGEKSKFGLAASQVLQLVEMLREAGRLESL 267 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 268 QLLHFHLGSQLANIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351 >gi|284008358|emb|CBA74748.1| biosynthetic arginine decarboxylase [Arsenophonus nasoniae] Length = 635 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 91/310 (29%), Gaps = 46/310 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + + A L+ +K + +TL + G Sbjct: 63 PALFCFPQILQHRLRSINAAFERARRDYGYQGDYFLVYPIKVNQQRRVIETLVRSGEPLG 122 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I L + ++ +++++ Sbjct: 123 LEAGSKAELMAVLAHAGMTKSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMTEIDLV 182 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L L + ++ + + G ++ +++ Sbjct: 183 LDEAKRLDVIPRLGVRARLASQGSGKWQASGGEKSKFGLAAAQVLQLVDTLRSVGRLESL 242 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + E +IE +GGG+ + Sbjct: 243 QLLHFHLGSQMSNIRDIATGARESARFYVELHKLGVKIECFDVGGGLGVDYEGTRSQSDC 302 Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 + + + E +++ + E G A+ + T L + V+ + N Sbjct: 303 SVNYGLNEYANNVIWAIGEACDEHGLGHPTVITESGRALTAHHTVLVSNVIGVERNEFTK 362 Query: 259 VIVDSSVEAH 268 + Sbjct: 363 ITPPPKDTEL 372 >gi|302523310|ref|ZP_07275652.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. SPB78] gi|302432205|gb|EFL04021.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. SPB78] Length = 507 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 44/150 (29%), Gaps = 4/150 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + +P ++ Q+ + N+ R ++ + A K + + L G +S Sbjct: 8 LGSPLNVVLPQQAVENVRRFEAARDRHHLRGTVYFAHKANRSSALVRALATSGAGLDVAS 67 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 L E+ G F + + + T+ +L + + Sbjct: 68 LEELRHGLGNGFTPDRIGATGPKEPEFLWLAARTGVTVTVEDQGELERLAALVARYE-LP 126 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK 148 +++ +S SR G Sbjct: 127 RVKVQLRLSGFPSQGVRQLSRPSRFGTPFA 156 Score = 42.8 bits (99), Expect = 0.087, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 18/131 (13%) Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA--------------HVPDY 272 + +EPG A++ V+D+ + V ++ A + Sbjct: 307 YDLAVEPGRALMDQCGATLARVVDVRTGPDGIAQVRLAMNADDCALEEHGILVDPLLLPR 366 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYNINR 330 P + G CL D+ + G+ ++F + AGY ++ Sbjct: 367 PGGAPVPDPGPGAATGVY-LHGNLCLESDLITRRLVQLPRLPAPGELLAFANTAGYAMDF 425 Query: 331 KNWFNGINMPT 341 N P Sbjct: 426 SAQ-NAERRPP 435 >gi|318040729|ref|ZP_07972685.1| arginine decarboxylase [Synechococcus sp. CB0101] Length = 645 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 36/294 (12%), Positives = 82/294 (27%), Gaps = 48/294 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + L + L+ + A + A +KC + + L Sbjct: 66 PLLIRFDDILEDRLERLHAAFERAIAQYGYAGRYQGVFPVKCNQQRHVVEELVSCGRRWH 125 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ E YKD + + ++ Sbjct: 126 FGLEAGSKAELLIALSLIDDPEALLICNGYKDQRYIETAILARRLGRQPVVVIEQADEVE 185 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156 + ++ L + + +S ++ G D + + Sbjct: 186 RIISASRALGAAPFIGVRAKLSSRSTGRWGSSVGDKAKFGLSIPDLLATVEALRQADLLG 245 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK------ 207 ++ L FH + L+ I E + ++ +GGG+ Sbjct: 246 DLRLLHFHVGSQINDIAVLKDALQEAGQIYVELTKQGAPMGFLDVGGGLGIDYDGSRTAT 305 Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD 250 +Y ++++ + + + E G AI ++ + L VL Sbjct: 306 AASTNYSLQNYANDVVATVRECCEPHGVALPTLVSESGRAIASHFSVLVFNVLG 359 >gi|313159328|gb|EFR58692.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Alistipes sp. HGB5] Length = 464 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 52/400 (13%), Positives = 116/400 (29%), Gaps = 53/400 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMDG 54 TP + K+ ++ A + A K+ K + + + Sbjct: 42 GTPLKITYLPKISQQINRAKRMFNVAMAKVDYKGSYNYCYCTKSSHFSFVLEEAMKNDIH 101 Query: 55 TTSSSLYEVMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ----LN 105 +SS Y++ + + + + +K + ++ F Sbjct: 102 LETSSAYDIHIINALYDSGIIDKDRYIICNGFKRPQYVENIAQLVNDGFVNTIPVLDNKE 161 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGL 161 + + KK + I + +R R + S+ + L Sbjct: 162 ELELFEDSFTKKCKVGIRIACEEEPKFEFYTSRLGIRYNDIIDFYKAKLKNSKKFQLKML 221 Query: 162 MFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKD 208 F N K + L E +++ +++GGG + Sbjct: 222 HFFINTGIKDTAYYWNELSKCINVYCELKAICPELDSLNIGGGFPIKNSLNFEYDYEYLT 281 Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVE 266 + + + + ++ I+ E G V + ++++ + N ++DSS Sbjct: 282 EEIIAQIKNICQRNDTEEPNIFTEFGSFTVGESGASLYSIVNQKQQNDRENWYMIDSSFI 341 Query: 267 AHVPDYL-LYQESATIYPNTGPYTAM---VCGRSCLAGDIF-----GEFHFEKPVKIG-- 315 +PD + Q + N + G +C + D + F ++ G Sbjct: 342 TTLPDTWGINQRYIMLAVNNWDKEYQRVLLGGLTCDSEDFYNAESHTNAIFLPKLEPGNT 401 Query: 316 DRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350 I F Y + F G I P + + D + Sbjct: 402 QYIGFFHTGAYQESLG-GFGGIQHCLIPAPKHIIIDRDKS 440 >gi|78049594|ref|YP_365769.1| arginine decarboxylase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038024|emb|CAJ25769.1| arginine decarboxylase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 645 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 104/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 76 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLAGHHGEGF 135 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107 G + S E+M YKD E + + T + K Sbjct: 136 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTLV 195 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L K GL + ++ + + G + ++ ++ Sbjct: 196 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 255 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 256 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 315 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 316 SINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 375 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V V E H+ + + G L+ G+ + + Sbjct: 376 VPVAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLPQRAR 432 Query: 314 IGDR 317 I D Sbjct: 433 IDDL 436 >gi|218131815|ref|ZP_03460619.1| hypothetical protein BACEGG_03436 [Bacteroides eggerthii DSM 20697] gi|317474568|ref|ZP_07933842.1| arginine decarboxylase [Bacteroides eggerthii 1_2_48FAA] gi|217986118|gb|EEC52457.1| hypothetical protein BACEGG_03436 [Bacteroides eggerthii DSM 20697] gi|316909249|gb|EFV30929.1| arginine decarboxylase [Bacteroides eggerthii 1_2_48FAA] Length = 630 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 92/313 (29%), Gaps = 49/313 (15%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ + G K ++ +K + + + + Sbjct: 59 PMLVRFPDILDNRIEKISCCFRQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ ++ YKD + ++ +++L Sbjct: 119 LGLEAGSKPELHAVIAINMNSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKLNELK 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IK 156 A++L+ K + I ++ S + + S+ G + +E+ Sbjct: 179 LIAKMAKQLNVKPNIGIRIKLASSGSGKWEDSGGDASKFGLSSSELLEALDFMADKGMQD 238 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + + + ++E++ +GGG+ + Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFKVEFVDIGGGLGVDYDGTRSSN 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G A+ + + L VL+ + Sbjct: 299 SEGSVNYSIQEYVNDSISTLVDASDKNGIPHPNIITESGRALTAHHSVLIFEVLETTNLP 358 Query: 256 KNLVIVDSSVEAH 268 + + + H Sbjct: 359 EWDDEEEVTENDH 371 >gi|124024519|ref|YP_001018826.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9303] gi|166220851|sp|A2CDK1|SPEA_PROM3 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|123964805|gb|ABM79561.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str. MIT 9303] Length = 648 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 92/319 (28%), Gaps = 51/319 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + L + L+ + A K A +KC + + L + Sbjct: 69 PLLIRFDDILEDRLEKLHSAFEQAISKYGYAGRYQGVFPVKCNQQRHVVEQLVESGRHWH 128 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ E YKD + + ++ Sbjct: 129 FGLEAGSKAELLIALSLVNDPEALLICNGYKDQRYIETAILARRLGRQPVVVIEQPDEVE 188 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIE--------SEIK 156 + +Q+L + + ++ + ++ G D + + Sbjct: 189 RIIRSSQELGAAPFIGVRAKLTTRSTGHWSSSVGEKAKFGLSFPDLLSTVEALRQADLLS 248 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK------ 207 ++ L FH + ++ I E + ++ +GGG+ Sbjct: 249 DLRLLHFHIGSQINDIAVLKDAIQEAGQIYVELTKLGAPMGYLDVGGGLGVDYDGSRSAS 308 Query: 208 ----DYPVKDFCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLD---ISE 253 +Y ++++ + + + E G AI ++ + L VL + Sbjct: 309 AASTNYSLQNYANDVVATVRECCKPHGITLPILVSESGRAIASHFSILVFDVLGTGTVPG 368 Query: 254 NIKNLVIVDSSVEAHVPDY 272 + N + ++ + Sbjct: 369 AVPNQTGEEPLTIHNLRET 387 >gi|311747334|ref|ZP_07721119.1| arginine decarboxylase, biosynthetic [Algoriphagus sp. PR1] gi|311302638|gb|EAZ83215.2| arginine decarboxylase, biosynthetic [Algoriphagus sp. PR1] Length = 462 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 56/406 (13%), Positives = 118/406 (29%), Gaps = 53/406 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG 54 TP L K+ N+ A NA K + D + Sbjct: 41 GTPLKLTYLPKISENIQKAKTYFNNAIQAHDYQGKYTYCYCTKSSHFSFVLDEALKNDIH 100 Query: 55 TTSSSLYEVMLGHEKFGGETHA---YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 +SS +++ L + + + + + V+ + + + Sbjct: 101 IETSSTFDIPLVRSLYAKGKITKNTFIICNGFKRDLYKQYIAELLNDGFVNCVPILDNLS 160 Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--------GL 161 + + + + + SRLG + D I+ + + L Sbjct: 161 EIDYYLEHVKVPFQVGIRIAADEEPKFGFYTSRLGVRYNDIIKLYEEKIKDHPLVSLKML 220 Query: 162 MFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK---DYPVKDFC 215 F N K + + L + + ++ + +GGG DY + Sbjct: 221 HFFINSGIKDTAYYWSELTRFIQKYVDLKKVAPTLDTMDIGGGWPIKTNVFFDYDYQYMA 280 Query: 216 QRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVE 266 ++ + + I+ E G V + + +VLD + + + ++D S Sbjct: 281 DQIVKNIKWMCAKNNTTEPNIFTEFGSFTVGESGAVLYSVLDEKLQNDKELWYMIDGSFI 340 Query: 267 AHVPDYL-LYQESATIYPNTGPYTAM---VCGRSCLAGDIFGE-----FHFEKPVKIG-- 315 +PD L Q+ + N T + G +C + D + + G Sbjct: 341 TQLPDSWGLNQKYIMLAINNWDETYHNINLGGLTCDSMDYYNSEAHQFNIYLPKPDNGKK 400 Query: 316 DRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAIRE 356 + F Y + + G I P + + D K + Sbjct: 401 QYLGFFHTGAYQESLG-GYGGIQHCLIPAPKHVLIDRDEDGKVVHR 445 >gi|317968210|ref|ZP_07969600.1| arginine decarboxylase [Synechococcus sp. CB0205] Length = 672 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 87/314 (27%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + L + L+ + A + A +KC + + L Sbjct: 93 PLLIRFDDILEDRLERLHGAFERAIAQYGYAGRYQGVFPVKCNQQRHVVEELVSCGKRWH 152 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ E YKD + + ++ Sbjct: 153 FGLEAGSKAELLIALSLVDDPEALLICNGYKDQRYIETAILARRLGRQPVVVIEQADEVE 212 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156 + +Q+L + I +S ++ G + + + + Sbjct: 213 RIIQASQELGAAPFIGIRAKLSSRSTGRWGSSVGAKAKFGLAIPELLATVEALKKANLLN 272 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK------ 207 ++ L FH + L+ I E + ++ +GGG+ Sbjct: 273 DLKLLHFHVGSQINDIAVLKDALQEAGQIYVELTKLGAPMGFLDVGGGLGVDYDGSRTAT 332 Query: 208 ----DYPVKDFCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++++ + + + E G AI ++ + L VL S Sbjct: 333 SASTNYSLQNYANDVVATVRECCDPHGVPVPTLVSESGRAIASHFSVLVFNVLGQSTVPS 392 Query: 257 NLVIVDSSVEAHVP 270 + V Sbjct: 393 GCPEAEGEEALTVR 406 >gi|148240725|ref|YP_001226112.1| arginine decarboxylase [Synechococcus sp. WH 7803] gi|147849264|emb|CAK24815.1| Arginine decarboxylase [Synechococcus sp. WH 7803] Length = 636 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 32/314 (10%), Positives = 85/314 (27%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + L + L+ A A +KC + + + + Sbjct: 66 PLLIRFDDILEDRLERLHAAFDRAIAHYGYAGRYQGVFPVKCNQQRHVVERIVESGQRWH 125 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ + YKD + + ++ Sbjct: 126 FGLEAGSKAELLIALSLLNDPDALLICNGYKDQRYLETAILARKLGRQPVVVIEQPDEVE 185 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIK 156 + + L + I +S + + G + +++ +K Sbjct: 186 RIIRASDHLGAAPMIGIRARLSTRSTGRWGSSVGDRAKFGLSIPELLDTTEALRNAGLLK 245 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------ 207 + L FH + L+ + +G + ++ +GGG+ Sbjct: 246 ELRLLHFHIGSQINDIAVLKDALQEAGQIYGELHRLGAPMGFLDVGGGLGVDYDGSRSAT 305 Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++++ + ++ + E G A+ ++ + L +L Sbjct: 306 AASTNYSLQNYANDVVATVKECCEPSGVPVPTLVSESGRALASHFSVLVFDILGTGAAPD 365 Query: 257 NLVIVDSSVEAHVP 270 + Sbjct: 366 ERPEPMDDDPLILR 379 >gi|115397045|ref|XP_001214114.1| hypothetical protein ATEG_04936 [Aspergillus terreus NIH2624] gi|114192305|gb|EAU34005.1| hypothetical protein ATEG_04936 [Aspergillus terreus NIH2624] Length = 292 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 35/281 (12%), Positives = 76/281 (27%), Gaps = 26/281 (9%) Query: 69 KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128 + K + + K ++ LRI Sbjct: 8 GVDPSRIIFANPCKSALSLVFAQMSGVNLATFDNLDELDSIKTYHPDCRLVLRIFACDDD 67 Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188 + L+ + ++ NV G+ FH + + ++N + F Sbjct: 68 ALLNLSQKFGAPEGSLLRLLERARELDLNVTGVSFHVGTGACNAAPYVMAIQNAKVVFEQ 127 Query: 189 F---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN 245 + + +GGG + + L + + ++I EPG V TL Sbjct: 128 AKRLGYDMNLLDIGGGFQDHNFEQIACHVAVALNDGLPR-DIRIIAEPGRYYVRTAYTLV 186 Query: 246 TTVLDISEN--------IKNLVIVDSSVEAHVP-------------DYLLYQESATIYPN 284 V+ L D + + + Sbjct: 187 CKVISRRRQISDPANLEPDMLYQNDGVYGSFMNVLIEKERLQPSLIPGSRHLHQHASKRR 246 Query: 285 TGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVA 324 +G + + G +C + D + F+ V +GD + + ++ Sbjct: 247 SGQHCYSIWGPTCDSIDCVTKQTVFDSEVNVGDWLKYSNMG 287 >gi|148243477|ref|YP_001228634.1| arginine decarboxylase [Synechococcus sp. RCC307] gi|166220861|sp|A5GWM2|SPEA_SYNR3 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|147851787|emb|CAK29281.1| Arginine decarboxylase [Synechococcus sp. RCC307] Length = 640 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 90/313 (28%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + + L + L+ + A + + +KC + + L + Sbjct: 69 PLLIRFEDILEDRLERLHGAFERAIAQYGYGGHYQGVFPVKCNQQRHVVEQLVESGRRWH 128 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ + YKD + + ++ Sbjct: 129 FGLEAGSKAELLIALSLLDDPKALLICNGYKDQRYIETAILARQLGRQPVVVIEQADEVP 188 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156 + + ++ L + + +S ++ G D + + Sbjct: 189 RIIEASRNLGAAPLIGVRAKLSTRSTGRWGSSVGEKAKFGLSIPDLLATVEALRDADLLG 248 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDK------ 207 ++ L FH + L+ + + ++ +GGG+ Sbjct: 249 DLRLLHFHVGSQICDIAVLKDALQEAGQLYVQLASLGAPMGFLDVGGGLGVDYDGSRSAT 308 Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++++ + + + E G AI ++ + L VL S + Sbjct: 309 AASTNYSLQNYANDVVATIRECCEPQGIVVPTLVSESGRAIASHFSVLVFNVLGQSGVNQ 368 Query: 257 NLVIVDSSVEAHV 269 + EA + Sbjct: 369 PSIPEAVEGEALI 381 >gi|297738878|emb|CBI28123.3| unnamed protein product [Vitis vinifera] Length = 180 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 29/61 (47%) Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + +T +++ V G +C + D+ + + D + F ++ Y + FNG ++ + Sbjct: 110 FCSTAKFSSTVFGPTCDSTDMVVAESQLPELHMNDVLVFYNMGAYTASAGTRFNGFDISS 169 Query: 342 I 342 I Sbjct: 170 I 170 >gi|295835319|ref|ZP_06822252.1| pyridoxal-dependent decarboxylase, C- sheet domain-containing protein [Streptomyces sp. SPB74] gi|295825426|gb|EDY43323.2| pyridoxal-dependent decarboxylase, C- sheet domain-containing protein [Streptomyces sp. SPB74] Length = 531 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 25/225 (11%), Positives = 59/225 (26%), Gaps = 11/225 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + +P ++ Q+ + N R ++ + A K + + L G +S Sbjct: 32 LGSPLNVVLPQQAVENARRFEAARDRHHLRGTVYFAHKANRSSALVRALATSRAGLDVAS 91 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QK 113 L E+ G F + + + T+ +L + + Sbjct: 92 LEELAHGLGSGFTPDRIGATGPKEPEFLWLAARTGVTVTVEDQGELERLAALVARYGLPR 151 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173 ++ L PS + D +E + V + + + Sbjct: 152 AKVQLRLSGFPSQGVRQLSRPSRFGTPFASLRTLLDAVERLRERVEVVGVAYHIDTTGLP 211 Query: 174 CFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC 215 L + + + +GGG + + Sbjct: 212 EKVLALDGCLRALDLCLERGLRPATVDIGGGFGVSHLADAREWEA 256 >gi|150003904|ref|YP_001298648.1| arginine decarboxylase [Bacteroides vulgatus ATCC 8482] gi|212692729|ref|ZP_03300857.1| hypothetical protein BACDOR_02227 [Bacteroides dorei DSM 17855] gi|237709425|ref|ZP_04539906.1| arginine decarboxylase [Bacteroides sp. 9_1_42FAA] gi|237724971|ref|ZP_04555452.1| biosynthetic arginine decarboxylase [Bacteroides sp. D4] gi|254880856|ref|ZP_05253566.1| arginine decarboxylase [Bacteroides sp. 4_3_47FAA] gi|265754624|ref|ZP_06089676.1| arginine decarboxylase [Bacteroides sp. 3_1_33FAA] gi|294775058|ref|ZP_06740587.1| arginine 2-monooxygenase [Bacteroides vulgatus PC510] gi|319639866|ref|ZP_07994595.1| hypothetical protein HMPREF9011_00192 [Bacteroides sp. 3_1_40A] gi|166220848|sp|A6L012|SPEA_BACV8 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|149932328|gb|ABR39026.1| putative arginine decarboxylase [Bacteroides vulgatus ATCC 8482] gi|212664665|gb|EEB25237.1| hypothetical protein BACDOR_02227 [Bacteroides dorei DSM 17855] gi|229436709|gb|EEO46786.1| biosynthetic arginine decarboxylase [Bacteroides dorei 5_1_36/D4] gi|229456481|gb|EEO62202.1| arginine decarboxylase [Bacteroides sp. 9_1_42FAA] gi|254833649|gb|EET13958.1| arginine decarboxylase [Bacteroides sp. 4_3_47FAA] gi|263234738|gb|EEZ20306.1| arginine decarboxylase [Bacteroides sp. 3_1_33FAA] gi|294451102|gb|EFG19573.1| arginine 2-monooxygenase [Bacteroides vulgatus PC510] gi|317388530|gb|EFV69380.1| hypothetical protein HMPREF9011_00192 [Bacteroides sp. 3_1_40A] Length = 630 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 89/306 (29%), Gaps = 46/306 (15%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ + G K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKIANCFKQASDEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + ++ +++L A+ Sbjct: 126 KPELHAVIAVNTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELRLIAKMAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163 +L+ + + I ++ S + + S+ G + +E+ + + F Sbjct: 186 QLNVRPNIGIRIKLASSGSGKWEDSGGDASKFGLTSSELLEALDFLEKKDMKDCLKLIHF 245 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + + + +E++ +GGG+ + + Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHVMGFNVEFVDIGGGLGVDYDGTRSANSESSVNY 305 Query: 221 FSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 ++Y I E G ++ + + L VL+ + + + Sbjct: 306 SIQEYVNDSISTLVDASDKNGIPHPNIITESGRSLTAHHSVLIFEVLETATLPEMDEDFE 365 Query: 263 SSVEAH 268 H Sbjct: 366 VGENDH 371 >gi|254497528|ref|ZP_05110320.1| truncated bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella drancourtii LLAP12] gi|254353245|gb|EET11988.1| truncated bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella drancourtii LLAP12] Length = 103 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 2/68 (2%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP Y+ + + L + L A+K + TL Q G S+ E+ Sbjct: 33 TPCYVYNSTIQIARAKQLLALEAIDN--LFYAIKANPHPTILKTLEQEGIGFECVSMQEL 90 Query: 64 MLGHEKFG 71 E F Sbjct: 91 TRVLELFP 98 >gi|325919711|ref|ZP_08181713.1| arginine decarboxylase [Xanthomonas gardneri ATCC 19865] gi|325549819|gb|EGD20671.1| arginine decarboxylase [Xanthomonas gardneri ATCC 19865] Length = 628 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 101/364 (27%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+L Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELKLV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L K GL + ++ + + G + ++ + Sbjct: 179 LEEARALEVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADCL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 239 QLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 299 SINYGLHSYASNIVQPLANACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V E H+ + + G L+ G+ + Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|149196616|ref|ZP_01873670.1| arginine decarboxylase [Lentisphaera araneosa HTCC2155] gi|149140296|gb|EDM28695.1| arginine decarboxylase [Lentisphaera araneosa HTCC2155] Length = 631 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 88/312 (28%), Gaps = 48/312 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L + NA + + +K + + + Sbjct: 57 PVVIRFHDVLRAQVRNLNLAFDNAIKEMEYQGCYRGVYPIKVNQMREVVEEIVDAGSEFD 116 Query: 54 -GTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E++ E+ YKD E + ++ S+LN Sbjct: 117 FGLEAGSKPEILAALAYNTNKESLTILNGYKDEEYMRLALLGVKMGRQCIVVIENFSELN 176 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEI--------K 156 +++ + + + + +S + ++ G + I+S Sbjct: 177 LLLKVSKQENIRPLIGLRLKLSSESRGKWASSSGENAKFGLSILEIIKSLKVLEEENMLD 236 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + L FH + K+ + + IE++ GGG+ Sbjct: 237 CLKLLHFHMGSQIADIKTIKEAIIEGSRVYAKIAKMGFNIEYLDAGGGLAIDYDGSRSSK 296 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + +++ + E I E G AI + + + T V+DI + Sbjct: 297 DSSRNYRLDEYAMDLVLSIKQICDDEEVAHPTIVTESGRAITAHHSCVVTNVIDIKKKHH 356 Query: 257 NLVIVDSSVEAH 268 + H Sbjct: 357 EDFEIQVQSSDH 368 >gi|260910993|ref|ZP_05917631.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 472 str. F0295] gi|260634900|gb|EEX52952.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 472 str. F0295] Length = 630 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 28/264 (10%), Positives = 76/264 (28%), Gaps = 28/264 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ + K ++ +K + + + + G + S Sbjct: 67 ILD-SRIEKTASCFRQASEKYDYKGENFVIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + ++ +++L A+ Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFLVIEKLNELELIARAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163 KL+ + L I ++ S + + S+ G + +++ + + F Sbjct: 186 KLNVRPNLGIRIKLASSGSGKWEESGGDASKFGLTSSELLQALELLDQKGLHDCLKLIHF 245 Query: 164 HNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + L+ + + ++++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALREASQFYVQLHNMGYDVDFVDCGGGLGVDYDGTRSPSSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTL 244 ++Y EA N Sbjct: 306 SIQEYVNDCIYTFVEAANKNGIDH 329 >gi|213620703|ref|ZP_03373486.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 156 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 13/130 (10%), Positives = 32/130 (24%), Gaps = 11/130 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118 + + D A +S + +V L + + + Sbjct: 82 RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVSPGHRVWL 141 Query: 119 GLRINPSVSY 128 + + Sbjct: 142 RVNPGFGHGH 151 >gi|322420301|ref|YP_004199524.1| arginine decarboxylase [Geobacter sp. M18] gi|320126688|gb|ADW14248.1| arginine decarboxylase [Geobacter sp. M18] Length = 635 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 35/319 (10%), Positives = 90/319 (28%), Gaps = 38/319 (11%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + + + KNA + +K + + + + G S Sbjct: 67 NILEGRIASISRVFKNAIHDNNYPAKYQTFYPIKVNQQRQVVEAIANFGKKYNIGLEVGS 126 Query: 60 LYEVMLGHEKFGGETH-AYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E++ G YKD E + TI+ + +L K + ++ Sbjct: 127 KPELVAAISMVTGSNIPIICNGYKDTEFIETVLFATRVGYDITIVVEKLFELEKIVEVSK 186 Query: 113 KLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIESEIK--------NVNGLMF 163 + L + +S + ++ G + + I + V L F Sbjct: 187 RTGIVPKLGVRVKLSSKGIGKWSTSGGEDAKFGLRISEIIAAIGMLKENDMLDCVKLLHF 246 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + L + + +E++ +GGG+ + + Sbjct: 247 HVGSQITKIDKIKNALIEGTRIYAEMRKLGVNLEFLDIGGGLGVDYDG-SKSSYFSSVNY 305 Query: 221 FSEKYSVQIYLEPGEAI------VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274 ++Y+ + + N + + ++ +++++ + +PD+ Sbjct: 306 SLDEYANDVIYQVKNICDDAGVPCPNIISESGRATVAHYSVLVTDVLNNNTQTLMPDFEF 365 Query: 275 YQESATIYPNTGPYTAMVC 293 T + Sbjct: 366 ILTEPDKLSPTVKKLVDIY 384 >gi|318079448|ref|ZP_07986780.1| lysine/ornithine decarboxylase [Streptomyces sp. SA3_actF] Length = 552 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 44/150 (29%), Gaps = 4/150 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + +P ++ Q+ + N+ R ++ + A K + + L G +S Sbjct: 53 LGSPLNVVLPQQAVENVRRFEAARDRHHLRGTVYFAHKANRSSALVRALATSGAGLDVAS 112 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 L E+ G F + + + T+ +L + + Sbjct: 113 LEELRHGLGSGFTPDRIGATGPKEPEFLWLAARTGATVTVEDQGELERLAALVARYE-LP 171 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK 148 +++ +S SR G Sbjct: 172 RVKVQLRLSGFPSQGVRQLSRPSRFGTPFA 201 Score = 42.8 bits (99), Expect = 0.087, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 18/131 (13%) Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA--------------HVPDY 272 + +EPG A++ V+D+ + V ++ A + Sbjct: 352 YDLAVEPGRALMDQCGATLARVVDVRTGPDGIAQVRLAMNADDCALEEHGILVDPLLLPR 411 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYNINR 330 P + G CL D+ + G+ ++F + AGY ++ Sbjct: 412 PGGAPVPDPGPGAATGVY-LHGNLCLESDLITRRLVQLPRLPAPGELLAFANTAGYAMDF 470 Query: 331 KNWFNGINMPT 341 N P Sbjct: 471 SAQ-NAERRPP 480 >gi|318056831|ref|ZP_07975554.1| lysine/ornithine decarboxylase [Streptomyces sp. SA3_actG] Length = 546 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 44/150 (29%), Gaps = 4/150 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + +P ++ Q+ + N+ R ++ + A K + + L G +S Sbjct: 47 LGSPLNVVLPQQAVENVRRFEAARDRHHLRGTVYFAHKANRSSALVRALATSGAGLDVAS 106 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 L E+ G F + + + T+ +L + + Sbjct: 107 LEELRHGLGSGFTPDRIGATGPKEPEFLWLAARTGATVTVEDQGELERLAALVARYE-LP 165 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK 148 +++ +S SR G Sbjct: 166 RVKVQLRLSGFPSQGVRQLSRPSRFGTPFA 195 Score = 42.8 bits (99), Expect = 0.087, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 18/131 (13%) Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA--------------HVPDY 272 + +EPG A++ V+D+ + V ++ A + Sbjct: 346 YDLAVEPGRALMDQCGATLARVVDVRTGPDGIAQVRLAMNADDCALEEHGILVDPLLLPR 405 Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYNINR 330 P + G CL D+ + G+ ++F + AGY ++ Sbjct: 406 PGGAPVPDPGPGAATGVY-LHGNLCLESDLITRRLVQLPRLPAPGELLAFANTAGYAMDF 464 Query: 331 KNWFNGINMPT 341 N P Sbjct: 465 SAQ-NAERRPP 474 >gi|33239501|ref|NP_874443.1| arginine decarboxylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|48474804|sp|Q7VEG4|SPEA_PROMA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|33237026|gb|AAP99095.1| Arginine decarboxylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 648 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 94/313 (30%), Gaps = 48/313 (15%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----N 49 + TP L L + L +NA + + +KC + + + Sbjct: 66 LNTPLLLRFDDILEDRLKKLHQAFENAINQYGYNNDYQGVFPIKCNQQRHVVEEIVTIGR 125 Query: 50 QYMDGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVS 102 ++ G + S E+++ + YKD ++ Sbjct: 126 KWHFGLEAGSKAELLIALALVNDPKAFLICNGYKDNRYIETTILARQLGRQPIVVIEQSD 185 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEI------ 155 ++ + +QKL + I +S S + S+ G + +++ Sbjct: 186 EVGRIIKASQKLGAAPLIGIRAKLSNQSSGRWGNSVGEKSKFGLSIPEILKAVQELTAAG 245 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK--- 207 + L FH + L+ + E + + +GGG+ Sbjct: 246 LLNELILLHFHVGSQINDIAILKNALQEASQIYVELNRLGAPMGHLDVGGGLGVDYDGSR 305 Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE 253 +Y ++++ + ++ ++ E G + ++ + L VL S Sbjct: 306 TATSASTNYSLQNYANDVVATIQECCKAKKVKVPKLISESGRFLSSHFSILIFNVLGTSS 365 Query: 254 NIKNLVIVDSSVE 266 + I S+ Sbjct: 366 VPTQIAIETSNEC 378 >gi|149602481|ref|XP_001520918.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus] Length = 146 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 25/59 (42%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 +T+ + G SC D E + +GD + F+++ + ++ FN P I Sbjct: 47 FTSSLWGPSCDELDQIVESCLLPELNVGDWLVFDNMGADTLREQSTFNDFQRPAIYYMM 105 >gi|289666341|ref|ZP_06487922.1| arginine decarboxylase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 628 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 104/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+LN Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNLV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L + GL + ++ + + G + ++ ++ Sbjct: 179 LEEARALDVQPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 239 KLLHFHMGSQISNVRDIANGMREATRYFVELSRLGVKISHVDVGGGLGIDYEGTRSRSYC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLPPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V + E H+ + + G L+ G+ + Sbjct: 359 VPDAHADEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|29348803|ref|NP_812306.1| arginine decarboxylase [Bacteroides thetaiotaomicron VPI-5482] gi|253568852|ref|ZP_04846262.1| biosynthetic arginine decarboxylase [Bacteroides sp. 1_1_6] gi|48474840|sp|Q8A2B1|SPEA_BACTN RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|29340709|gb|AAO78500.1| putative arginine decarboxylase [Bacteroides thetaiotaomicron VPI-5482] gi|251840871|gb|EES68952.1| biosynthetic arginine decarboxylase [Bacteroides sp. 1_1_6] Length = 630 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 37/316 (11%), Positives = 95/316 (30%), Gaps = 49/316 (15%) Query: 2 IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52 + +P L L N ++ + G K ++ +K + + + + Sbjct: 56 VASPMLLRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGK 115 Query: 53 ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102 G + S E+ ++ YKD + ++ ++ Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKMN 175 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156 +L A++L+ + + I ++ S + + S+ G + +E+ Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFMESKG 235 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + + +E++ +GGG+ Sbjct: 236 LKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFVDIGGGLGVDYDGTR 295 Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252 + + ++Y I E G A+ + + L VL+ + Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETA 355 Query: 253 ENIKNLVIVDSSVEAH 268 + + + +AH Sbjct: 356 TLPEWDDEEEIAPDAH 371 >gi|88809770|ref|ZP_01125276.1| arginine decarboxylase [Synechococcus sp. WH 7805] gi|88786154|gb|EAR17315.1| arginine decarboxylase [Synechococcus sp. WH 7805] Length = 636 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 33/314 (10%), Positives = 85/314 (27%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + L+ A + + +KC + + L Sbjct: 66 PLLIRFDDILEDRLERLHAAFDRAIAHYGYSGRYQGVFPVKCNQQRHVVERLVDSGQRWH 125 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ E YKD + + ++ Sbjct: 126 FGLEAGSKAELLIALSLLKDPEALLICNGYKDQRYLETAILARKLGRQPVVVIEQPDEVE 185 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIK 156 + + L + I +S + + G + +++ +K Sbjct: 186 RIIQASDHLGAAPMIGIRARLSTRSTGRWGSSVGDRAKFGLSIPELLDTTAALRDAGLLK 245 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------ 207 + L FH + L+ + +G + ++ +GGG+ Sbjct: 246 ELRLLHFHIGSQINDIAVLKDALQEAGQIYGELHRLGAPMGFLDVGGGLGIDYDGSRSAT 305 Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++++ + ++ + E G A+ ++ + L +L Sbjct: 306 AASTNYSLQNYANDVVATVKECCEPSGVPVPTLVSESGRALASHFSVLVFDILGTGAAPD 365 Query: 257 NLVIVDSSVEAHVP 270 + Sbjct: 366 ERPERMDDDPLILR 379 >gi|304383649|ref|ZP_07366108.1| arginine 2-monooxygenase [Prevotella marshii DSM 16973] gi|304335173|gb|EFM01444.1| arginine 2-monooxygenase [Prevotella marshii DSM 16973] Length = 630 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 32/274 (11%), Positives = 79/274 (28%), Gaps = 31/274 (11%) Query: 2 IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52 + +P L L N ++ K + ++ +K + + + + Sbjct: 56 VSSPVLLRFPDILDNRIEKTACCFQRAAKEYDYQGENFIIYPIKVNQMQPVVEEIISHGR 115 Query: 53 ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102 G + S E+ ++ YKD + I+ ++ Sbjct: 116 KFNLGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVIEKLN 175 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES-------- 153 +L+ A+KL+ K + I ++ S + + S+ G + +++ Sbjct: 176 ELDIIAQAAKKLNVKPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLQALDTMEKKG 235 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + + +E++ GGG+ Sbjct: 236 LHDCLKLIHFHIGSQVTKIRHIQTALREASQFYIQLHKLGYDVEFVDCGGGLGVDYDGTR 295 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244 + + ++Y EA N Sbjct: 296 SPNSESSVNYSIQEYVNDCLYTFIEAANANGIKH 329 >gi|115379802|ref|ZP_01466872.1| arginine decarboxylase [Stigmatella aurantiaca DW4/3-1] gi|115363194|gb|EAU62359.1| arginine decarboxylase [Stigmatella aurantiaca DW4/3-1] Length = 621 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/275 (13%), Positives = 80/275 (29%), Gaps = 32/275 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + L + + K A + + +K + +T+ Y Sbjct: 18 PLLIRFTDVLRHRVIHLNEAFKKAITESNYKGQYRGVYPIKVNQHRYVVETIVETGKNYG 77 Query: 53 DGTTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSNC------DTIIFNTVSQLN 105 G + S E++ E YKD E ++ S+L Sbjct: 78 YGLEAGSKPELLAVMALLDNEDALVICNGYKDEEYVETALFFSRLGRNVILVVEKPSELP 137 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIK 156 + A+K L + +S + + + G + + + Sbjct: 138 LIAEVARKTGIAPRLGVRVKLSTRGAGKWEASGGDRSKFGLTSSELMNCISFMRETGLLP 197 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD 213 + L FH + + L+ + + ++++ +GGG+ + Sbjct: 198 HFELLHFHLGSQISNIRNVKNALREVGCFYVEVARQGAPLKYLDVGGGLGVDYDG-SQTN 256 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 F + +E+Y+ + EA T T V Sbjct: 257 FTSSMNYTTEEYANDVVFGVMEACDRAGVTHPTLV 291 >gi|289805606|ref|ZP_06536235.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 198 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 12/165 (7%) Query: 16 NNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGE 73 N+ K A K + G+ + ++S YEV E F G+ Sbjct: 2 RNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGD 61 Query: 74 THAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHK--KIGLRINPSVSYS 129 +N K D I +++ +L ++KL K + +R+ P+V + Sbjct: 62 QIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSA 121 Query: 130 KF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 A + E C+ + ++ GL H + Sbjct: 122 THAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQ 166 >gi|291513701|emb|CBK62911.1| Diaminopimelate decarboxylase [Alistipes shahii WAL 8301] Length = 464 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 53/400 (13%), Positives = 118/400 (29%), Gaps = 53/400 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMDG 54 TP + K+ ++ A + A K+ K + + + Sbjct: 42 GTPLKITYLPKISQQINRAKRMFNVAMAKVDYKGSYNYCYCTKSSHFSFVLEEAMKNDIH 101 Query: 55 TTSSSLYEVMLGHEKFGGETH-----AYNVAYKDCEIDAVLSNCDTIIFNTVSQ----LN 105 +SS Y++ + + + G +K + ++ F+ Sbjct: 102 LETSSAYDIHIINALYDGGIIDKDRYIICNGFKRPQYVENIAQLVNDGFSNTIPVLDNKE 161 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGL 161 + + KK + I + +R R + S+ + L Sbjct: 162 ELELFEDSFTKKCKVGIRIACEEEPKFDFYTSRLGIRYNDIVDFYKAKLRNSKKFQLKML 221 Query: 162 MFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIH----------FTDKD 208 F N K + N+ E +++ +++GGG + Sbjct: 222 HFFINTGIKDTAYYWNELSKCMNVYCELKAICPELDSLNVGGGFPIKNSLNFEYDYEYLT 281 Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVE 266 + + + + + I+ E G V + + ++++ + N ++DSS Sbjct: 282 EEIVAQIKNICQRNGVEEPNIFTEFGSFTVGESGAVLYSIVNQKQQNDRENWYMIDSSFI 341 Query: 267 AHVPDYL-LYQESATIYPNTGPYTAM---VCGRSCLAGDIFGEF-----HFEKPVKIG-- 315 +PD + Q + N + G +C + D + F ++ G Sbjct: 342 TTLPDTWGINQRYIMLAVNNWDKEYQRVLLGGLTCDSEDFYNSECHTSAIFLPKLEAGNT 401 Query: 316 DRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350 I F Y + F G I P + + D + Sbjct: 402 QYIGFFHTGAYQESLG-GFGGIQHCLIPAPKHVIIDRDKS 440 >gi|194367540|ref|YP_002030150.1| arginine decarboxylase [Stenotrophomonas maltophilia R551-3] gi|194350344|gb|ACF53467.1| arginine decarboxylase [Stenotrophomonas maltophilia R551-3] Length = 629 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 102/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 60 PLLVRFPDILGQRLGKLQAAFGQAQQDWEYSGGYTAVYPIKVNQTRGVAGTLASHHGEGF 119 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+L Sbjct: 120 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELKLV 179 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++++ L K GL + ++ + + G + ++ + Sbjct: 180 LEESKALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQLLDLWKSLRDTEYADCL 239 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDK-------- 207 N L FH + + + ++ + F +I + +GGG+ + Sbjct: 240 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKITHVDVGGGLGVDYEGTRSRSFC 299 Query: 208 --DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 +Y + + + + +I E G A+ + L V ++ E + Sbjct: 300 SINYGLHSYASNIVQPLANACEEFGLTPPRIVTECGRAMTAHHAVLIANVSEVEEAQEGR 359 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V E H+ + + G LA G+ + + Sbjct: 360 VPDQHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LASYALGQIDLPQRAR 416 Query: 314 IGDR 317 I D Sbjct: 417 IDDL 420 >gi|298208847|ref|YP_003717026.1| probable diaminopimelate decarboxylase [Croceibacter atlanticus HTCC2559] gi|83848774|gb|EAP86643.1| probable diaminopimelate decarboxylase [Croceibacter atlanticus HTCC2559] Length = 470 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 49/408 (12%), Positives = 104/408 (25%), Gaps = 85/408 (20%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P + +N+ + K L A K + + G ++S Sbjct: 34 GSPLNIHSLPSFEDNITEYQEVLNVYNFKSQLFFARKANKFKNLIEAAVNSDIGVDTASY 93 Query: 61 YEVMLGH--EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + + + ++ L + II + +L + + + L Sbjct: 94 EELKQCLDLQVESSKLISTAAIKNKELLELALKHNVVIIIDNKDELIEIEKLVKSLDCVA 153 Query: 119 GLRINPSVSYSKFILADPNRPFSRL---GEKCKDKIESEIKNVNGLMFHN---------- 165 + I S F C + N+ G FH Sbjct: 154 QIGIRVSGFAHNNTKLFSRFGFDIEEVEPILCNYLKGNPSFNLKGFHFHLDGYSTAQRGN 213 Query: 166 -----------------------------NCENKSFLCFSAMLKNIEKEFGHFITQIEWI 196 KS + + +++ ++ + Sbjct: 214 ALHQTISLFESYKSTFPNLSFIDIGGGILMNYLKSETEWQTFQEQLKEAILEKRPELTYK 273 Query: 197 SLGGGIHFT----------DKDYPVKDFCQR--------------LKEFSEKYSVQIYLE 232 + G G + + + E +++ LE Sbjct: 274 NSGLGFTIRNGVVEGKLATYPYFNTTTKANFLGEVLETLNSQNISVYKRLEDNEIELRLE 333 Query: 233 PGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 PG +++ V I + + SS + + ++ Y Sbjct: 334 PGRSLLNQVGITMARVAHRKVDARGNHLIGLEMNMSQLKSSSADFLLDPFVSY---HNED 390 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEF--HFEKPVKIGDRISFEDVAGYNI 328 P A G CL D+ + ++ IGD + F + AGY + Sbjct: 391 ETQQPIEAYFTGAYCLEQDVILKRKVVLKQLPSIGDVVIFVNTAGYMM 438 >gi|17230893|ref|NP_487441.1| arginine decarboxylase [Nostoc sp. PCC 7120] gi|48474916|sp|Q8YRP3|SPEA_ANASP RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|17132496|dbj|BAB75100.1| arginine decarboxylase [Nostoc sp. PCC 7120] Length = 679 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 44/340 (12%), Positives = 99/340 (29%), Gaps = 51/340 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN-------AGV-KLLLALKCFAAWGMFDTLNQYM---- 52 P + L + ++ GV + + +KC + + L ++ Sbjct: 109 PLLIRFSDILEDRIERLNACFAKAIARYNYPGVYRGVFPVKCNQQRHLIEDLVRFGRPHQ 168 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105 G + S E+M+ + YKD E I+ V +++ Sbjct: 169 FGLEAGSKPELMIALALLDTPGSLLICNGYKDREYVETAMLSQRLGQTPIIVLEQVEEVD 228 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156 + +L K L + +S + + G + I++ Sbjct: 229 LVIAASHQLGIKPILGVRAKLSTQGMGRWGTSTGDRAKFGLTIPEIIQAVDKLRDADLLD 288 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206 ++ + FH + I E ++++ +GGG+ Sbjct: 289 SLQLMHFHIGSQISAINVIKDAIQEASRIYVELASLGANMKYLDVGGGLGVDYDGSQTNF 348 Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ + + + E G AI ++ + L VL S+ + Sbjct: 349 YASKNYNMQNYANDIVAELKDTCAEKQIPVPTLISESGRAIASHQSVLIFDVLSTSDVPR 408 Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 + E+ + Y N Y + Sbjct: 409 DNPEPPKEGES---PVINYLWETYQSINKENYQEFYHDAT 445 >gi|310820757|ref|YP_003953115.1| arginine decarboxylase [Stigmatella aurantiaca DW4/3-1] gi|309393829|gb|ADO71288.1| Arginine decarboxylase [Stigmatella aurantiaca DW4/3-1] Length = 669 Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 37/275 (13%), Positives = 80/275 (29%), Gaps = 32/275 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + L + + K A + + +K + +T+ Y Sbjct: 66 PLLIRFTDVLRHRVIHLNEAFKKAITESNYKGQYRGVYPIKVNQHRYVVETIVETGKNYG 125 Query: 53 DGTTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSNC------DTIIFNTVSQLN 105 G + S E++ E YKD E ++ S+L Sbjct: 126 YGLEAGSKPELLAVMALLDNEDALVICNGYKDEEYVETALFFSRLGRNVILVVEKPSELP 185 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIK 156 + A+K L + +S + + + G + + + Sbjct: 186 LIAEVARKTGIAPRLGVRVKLSTRGAGKWEASGGDRSKFGLTSSELMNCISFMRETGLLP 245 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD 213 + L FH + + L+ + + ++++ +GGG+ + Sbjct: 246 HFELLHFHLGSQISNIRNVKNALREVGCFYVEVARQGAPLKYLDVGGGLGVDYDG-SQTN 304 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 F + +E+Y+ + EA T T V Sbjct: 305 FTSSMNYTTEEYANDVVFGVMEACDRAGVTHPTLV 339 >gi|291461062|ref|ZP_06600270.1| putative Orn/DAP/Arg decarboxylase [Fusobacterium periodonticum ATCC 33693] gi|291379154|gb|EFE86672.1| putative Orn/DAP/Arg decarboxylase [Fusobacterium periodonticum ATCC 33693] Length = 211 Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 61/197 (30%), Gaps = 34/197 (17%) Query: 191 TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---------SVQIYLEPGEAIVTNT 241 +++++++G G+ + RLK ++ + I++E G + + Sbjct: 14 YKLKYVNMGSGMGIQYSKSDIPLDLDRLKSLVKENLSDFKKYNPDITIFIETGRYVTAKS 73 Query: 242 TTLNTTVLDISENI-KNLVIVDSSVEAHVPD-----YLLYQESATIYP------------ 283 VLD + +I+ +++ + Y++ + Sbjct: 74 GFYVMKVLDKKVSYGTTYLILKNTLNGFIKPSIIKLVSKYEKENPVSWEPLFTSKDAFEI 133 Query: 284 ------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNG 336 + G C A D+ E + GD I + Y F+ Sbjct: 134 LTFKEETDKKEKVTLVGNLCTATDVIAEDIVLPSMDCGDVIVINNAGSYAAVLSPMQFSS 193 Query: 337 INMPTIAVKNVDGTIKA 353 P +VD ++K Sbjct: 194 QEKPVEVFLSVDDSVKI 210 >gi|213021895|ref|ZP_03336342.1| hypothetical protein Salmonelentericaenterica_03877 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 58 Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364 +GD ++F D Y I + +N + + + +G + IR SY D Sbjct: 2 HVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 54 >gi|159902593|ref|YP_001549937.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9211] gi|159887769|gb|ABX07983.1| Orn/DAP/Arg decarboxylase family 2 [Prochlorococcus marinus str. MIT 9211] Length = 648 Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 93/298 (31%), Gaps = 48/298 (16%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----N 49 +K+P L L + + KNA K + +KC + + + Sbjct: 66 LKSPLLLRFDDILEDRIKKLHGAFKNAISHYEYEGEYKGVFPIKCNQQRHVVEEIVTCSR 125 Query: 50 QYMDGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVS 102 ++ G + S E+++ E YKD ++ + Sbjct: 126 EWHFGLEAGSKAELLIALSLLDDPEALLICNGYKDKRYIETSILARQLGRKPIVVIEQLD 185 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIK----- 156 ++++ + +K+ + I +S ++ S+ G + ++ + Sbjct: 186 EVDRIINATKKIGSAPFIGIRAKLSSQSSGRWSNSIGEKSKFGLSIPEISQAVQQLKDAG 245 Query: 157 ---NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + L FH + L+ +I E + + +GGG+ Sbjct: 246 LLKELILLHFHIGSQINDIAVLKNALQEASHIYIELKRLGAPMGHLDVGGGLGIDYDGSR 305 Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251 +Y ++++ + ++ + E G A+ ++ + L VL Sbjct: 306 TATQASTNYSLQNYANDVVATIQECCKENQVQVPTLVSENGRAVSSHFSILVFNVLGT 363 >gi|289669332|ref|ZP_06490407.1| arginine decarboxylase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 628 Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 104/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+LN Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNLV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L + GL + ++ + + G + ++ ++ Sbjct: 179 LEEARALDVQPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 239 KLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLPPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V + E H+ + + G L+ G+ + Sbjct: 359 VPDAHADEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|294496536|ref|YP_003543029.1| Orn/DAP/Arg decarboxylase 2 [Methanohalophilus mahii DSM 5219] gi|292667535|gb|ADE37384.1| Orn/DAP/Arg decarboxylase 2 [Methanohalophilus mahii DSM 5219] Length = 347 Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 38/339 (11%), Positives = 105/339 (30%), Gaps = 22/339 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYMDGTTSSSL 60 + P +++ K+ ++ I + + K + + + + + Sbjct: 3 VPEPKFILSKKVIMQQYGLVEDIADI----VSYSSKTNPKVTSVLEEMTNCL--FSVHME 56 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ + T + + I + L+ + + ++ Sbjct: 57 NELKHIDDL--SRTVFLAQGWSSAQAKDLYDRGIRNFILDNEHDLDVLLTTLKDTNHRVN 114 Query: 120 LRIN---PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 L + S P + + + ++S G+ FH +N + Sbjct: 115 LMLRLKLRENSIRTERYFVFGMPSATINRHIGELVDSPNIGKLGIHFHRKTQN--VSEWK 172 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQIY 230 + + I+ +++GGG+ + + +++ + + + Sbjct: 173 LQRDIEDVITPETLDAIDILNIGGGLPSVYANSNADVIGGIFKRITDFRKWLHERDISLM 232 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290 +EPG I L T V+ + E+ + + + + + Sbjct: 233 VEPGRYIAAPAGKLVTRVMAVYEDNVIVNASVYNSDMDAILVPVKLRVENEVSSHEGEAY 292 Query: 291 MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 ++ G + + D+F + + +IGD I+F + YN Sbjct: 293 VIKGCTPCSMDLFRYRVYLENRPQIGDPITFINAGAYNF 331 >gi|332884947|gb|EGK05202.1| biosynthetic arginine decarboxylase [Dysgonomonas mossii DSM 22836] Length = 630 Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 87/313 (27%), Gaps = 49/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ K A ++ +K + + L + Sbjct: 59 PVLIRFPDILDNRIEKISTCFKQAAEEYEYKGQNHIIYPIKVNQMRPVVEELISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ ++ YKD + I+ ++++ Sbjct: 119 IGLEAGSKPELHAVIAINTDSDSLIICNGYKDESYIELALLAQKMGKHIFIVVEKLNEIP 178 Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESE--------IK 156 A++L + I S + S+ G + +E+ + Sbjct: 179 LIAKIAKRLKITPNIGIRIKLASSGSGKWEESGGDGSKFGLNSSELLEALAYLEKANMQE 238 Query: 157 NVNGLMFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 ++ + FH + + ++E++ +GGG+ Sbjct: 239 SLRLIHFHIGSQITKIRRIKTALREAAQFYVQLHAMGFKVEFVDIGGGLGVDYDGTRSSY 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G ++ + + L VL+ + Sbjct: 299 NESSVNYSIQEYVNDSIATMVDAADKNGIPHPNIITESGRSLTAHHSILVFEVLETATLP 358 Query: 256 KNLVIVDSSVEAH 268 + D S + H Sbjct: 359 EWDEDKDLSEDDH 371 >gi|226940370|ref|YP_002795444.1| arginine decarboxylase [Laribacter hongkongensis HLHK9] gi|226715297|gb|ACO74435.1| SpeA [Laribacter hongkongensis HLHK9] Length = 632 Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 84/298 (28%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL---NQYMD 53 P + L + A G LL +K + + Sbjct: 59 PLLVRFPDILQQRARRIIEGFDAAREAWEYPQGYTLLYPVKVNQQEAVIKAIIADTSLPI 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 G + S E+M YKD E + + + K + Sbjct: 119 GLEAGSKPELMAVLALARPGCKITCNGYKDREFIRLALIGQKLGHEIFIVIEKEAEVQYV 178 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 + + L I P+ S+ AD + G + V Sbjct: 179 IDEARRLGIMPNVGLRVRLTSHVAGKWADSGGEKGKFGLSAAQLLSVSRQFIDAGMQDAV 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + A + + FG ++ + +GGG+ Sbjct: 239 RLLHFHMGSQITNISDYRAGFREALRYFGELCRLGLPLDHLDVGGGLGVDYDGTHSRNDS 298 Query: 208 --DYPVKDFCQRL----KEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + ++ + + +EF +++ + E G A+ + L V D+ + Sbjct: 299 SVNYTIGEYAETIVSMTREFCDEHGLTCPHVMSESGRALTAHHAVLIMNVTDVEKTND 356 >gi|218440951|ref|YP_002379280.1| arginine decarboxylase [Cyanothece sp. PCC 7424] gi|218173679|gb|ACK72412.1| arginine decarboxylase [Cyanothece sp. PCC 7424] Length = 679 Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 96/320 (30%), Gaps = 55/320 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52 P + L + ++ A + + +KC + ++L +Y Sbjct: 95 PLLIRFSDILADRIERLNACFAKAIARYNYPNVYRGVYPIKCNQHRHIVESLVRYGKPYH 154 Query: 53 DGTTSSSLYEVMLGHEKFGGE--------THAYNVAYKDCEIDAVLSN------CDTIIF 98 G + S E+M+ YKD E I+ Sbjct: 155 FGLEAGSKPELMIALATLEPVANPQNNQFPLLICNGYKDQEYIETALLATRLGQRPIIVI 214 Query: 99 NTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE----- 152 + +++ +++ K + + +S + + G + + Sbjct: 215 EQLEEVDLILKISRQFEIKPIVGVRAKLSSKGIGRWGNSAGDRAKFGLTIPEILTVVNRL 274 Query: 153 ---SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTD 206 + + L FH + S ++ + +G ++++ +GGG+ Sbjct: 275 EACQMLDCLQLLHFHIGSQISSISVIKDAIREAAQIYGELVKLGAHMQYLDVGGGLGVDY 334 Query: 207 ----------KDYPVKDFCQRLKEFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVL 249 K+Y ++++ + ++ + + E G AI + + L VL Sbjct: 335 DGSKTNFYASKNYNMQNYANDIVAEVKEACEERNITAPVLVSESGRAIAAHHSVLIFDVL 394 Query: 250 DISENIKNLVIVDSSVEAHV 269 +E + I E + Sbjct: 395 GTNEVPRTPPIAVEEKEHLI 414 >gi|75909629|ref|YP_323925.1| arginine decarboxylase [Anabaena variabilis ATCC 29413] gi|75703354|gb|ABA23030.1| arginine decarboxylase [Anabaena variabilis ATCC 29413] Length = 671 Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 44/340 (12%), Positives = 99/340 (29%), Gaps = 51/340 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN-------AGV-KLLLALKCFAAWGMFDTLNQYM---- 52 P + L + ++ GV + + +KC + + L ++ Sbjct: 101 PLLIRFSDILEDRIERLNACFAKAIARYNYPGVYRGVFPVKCNQQRHLIEDLVRFGKPHQ 160 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105 G + S E+M+ + YKD E I+ V +++ Sbjct: 161 FGLEAGSKPELMIALALLDTPGSLLVCNGYKDREYVETAMLSQRLGQTPIIVLEQVEEVD 220 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156 + +L K L + +S + + G + I++ Sbjct: 221 LVIAASHQLGIKPILGVRAKLSTQGMGRWGTSTGDRAKFGLTIPEIIQAVDKLRDADLLD 280 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206 ++ + FH + I E ++++ +GGG+ Sbjct: 281 SLQLMHFHIGSQISAINVIKDAIQEASRIYVELASLGANMKYLDVGGGLGVDYDGSQTNF 340 Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ + + + E G AI ++ + L VL S+ + Sbjct: 341 YASKNYNMQNYANDIVAELKDTCAEKQIPVPTLISESGRAIASHQSVLIFDVLSTSDVPR 400 Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 + E+ + Y N Y + Sbjct: 401 DNPEPPKEGES---PVINYLWETYQSINKENYQEFYHDAT 437 >gi|319900413|ref|YP_004160141.1| arginine decarboxylase [Bacteroides helcogenes P 36-108] gi|319415444|gb|ADV42555.1| arginine decarboxylase [Bacteroides helcogenes P 36-108] Length = 630 Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 94/313 (30%), Gaps = 49/313 (15%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ + G K ++ +K + + + + Sbjct: 59 PMLVRFPDILDNRIEKVSCCFKQAAEEYGYKGENFIIYPIKVNQMRPVVEEMINHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ ++ YKD + ++ +++LN Sbjct: 119 LGLEAGSKPELHAVIGVNTDPDSLVVCNGYKDESFIELALLAQKMGKRIFLVVEKLNELN 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156 A++L + + I ++ S + + S+ G + +E+ Sbjct: 179 LIAKMAKQLKVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLEKKEMKD 238 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + L+ + F + IE++ GGG+ + Sbjct: 239 CLKLIHFHIGSQITKIRRIKNALREASQFFVQLHNLGFNIEFVDTGGGMGVDYDGTRSSN 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G ++ + + L VL+ + Sbjct: 299 SESSVNYSIQEYVNDVVSTFVDAADKHGFSHPNIITETGRSLTAHHSVLVFEVLETASLP 358 Query: 256 KNLVIVDSSVEAH 268 + + EAH Sbjct: 359 QMDDAWEPGEEAH 371 >gi|218246486|ref|YP_002371857.1| arginine decarboxylase [Cyanothece sp. PCC 8801] gi|218166964|gb|ACK65701.1| arginine decarboxylase [Cyanothece sp. PCC 8801] Length = 681 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 95/341 (27%), Gaps = 55/341 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + L + L A + + +KC + +T+ Y Sbjct: 77 PLLIRFSDILADRLARLNASFDRAIARYNYPNKYQGVYPIKCNQHRHIVETIVNYSKSYQ 136 Query: 53 DGTTSSSLYEVMLGHEKFGG-------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN 105 G + S E+M+ YKD + + + + Sbjct: 137 FGLEAGSKPELMIALATLDPSLIAPNYAPIIICNGYKDPAYIKTAILATQLGYKPIIVIE 196 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKI------- 151 + ++ L L I PS+ + ++ G + + Sbjct: 197 QLEELFLTLEISKQLGIEPSLGVRAKLSTKGSGRWGNSTGDRAKFGLTIPEILTVVEYLK 256 Query: 152 -ESEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD- 206 E + + L FH + I + ++++ +GGG+ Sbjct: 257 SEENLHYLQLLHFHIGSQIASISVIKDAIREASQIYIQLAKVNPNMQYLDVGGGLGVDYD 316 Query: 207 ---------KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD 250 K+Y ++++ + ++ + E G AI + + L VL+ Sbjct: 317 GSKTNFYASKNYNMQNYANDIVAEVKESCEAANIEAPILISESGRAIAAHHSVLIFDVLN 376 Query: 251 ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291 ++ + + + L+Q +I T Sbjct: 377 TNDVCTTPPEFIAENDNLII-RNLWQTYESIDVKNYQETYH 416 >gi|87119253|ref|ZP_01075151.1| biosynthetic arginine decarboxylase [Marinomonas sp. MED121] gi|86165644|gb|EAQ66911.1| biosynthetic arginine decarboxylase [Marinomonas sp. MED121] Length = 631 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 32/273 (11%), Positives = 80/273 (29%), Gaps = 42/273 (15%) Query: 18 LDTALYIRKNAGVKLLLALKCFAAWGMFDTL------NQYMDGTTSSSLYEVMLGHE-KF 70 + + + + ++ +K + + + N G + S E+M Sbjct: 79 YEAIAFYQYHGDYSIVYPIKVNQQRRVVEEITGFQKENPLSVGLEAGSKPELMAVLAMHQ 138 Query: 71 GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV---- 126 + YKD E + + + + K + A L + L + P + Sbjct: 139 SPDGVIVCNGYKDKEFIHLALMAEKMGHKVFIVVEKMHELAWILEEAERLSVQPRIGIRI 198 Query: 127 ---SYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFLCF 175 S + S+ G + + + + FH + Sbjct: 199 KLASTCTTHWDNSGGDKSKFGLTTSQLMRAIDSLRDANMLHCLELIHFHLGSQITRIRDI 258 Query: 176 SAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK----------DYPVKDFCQ----RL 218 LK + + +++W+ +GGG+ + +Y + ++ Sbjct: 259 QNSLKECARFYAELHSLGAKVKWVDVGGGLGVDYEGTRCQSAYSANYSISEYANNVVFAF 318 Query: 219 KEFSEKY---SVQIYLEPGEAIVTNTTTLNTTV 248 +++ + E G A+ + + T V Sbjct: 319 HNVCQEHDLPHPNLISESGRAVTAHHAMMITNV 351 >gi|257059529|ref|YP_003137417.1| arginine decarboxylase [Cyanothece sp. PCC 8802] gi|256589695|gb|ACV00582.1| arginine decarboxylase [Cyanothece sp. PCC 8802] Length = 681 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 88/319 (27%), Gaps = 54/319 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + L + L A + + +KC + +T+ Y Sbjct: 77 PLLIRFSDILADRLARLNASFDRAIARYNYPNKYQGVYPIKCNQHRHIVETIVNYSKSYQ 136 Query: 53 DGTTSSSLYEVMLGHEKFGG-------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN 105 G + S E+M+ YKD + + + + Sbjct: 137 FGLEAGSKPELMIALATLDPSLIAPNYAPIIICNGYKDPAYIKTAILATQLGYKPIIVIE 196 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKI------- 151 + ++ L L I PS+ + ++ G + + Sbjct: 197 QLEELFLTLEISKQLGIEPSLGVRAKLSTKGSGRWGNSTGDRAKFGLTIPEILTVVEYLK 256 Query: 152 -ESEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD- 206 E + + L FH + I + ++++ +GGG+ Sbjct: 257 SEENLHYLQLLHFHIGSQIASISVIKDAIREASQIYIQLAKVNPNMQYLDVGGGLGVDYD 316 Query: 207 ---------KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD 250 K+Y ++++ + ++ + E G AI + + L VL+ Sbjct: 317 GSKTNFYASKNYNMQNYANDIVAEVKESCEAANIEAPILISESGRAIAAHHSVLIFDVLN 376 Query: 251 ISENIKNLVIVDSSVEAHV 269 + + E + Sbjct: 377 TNNVCTTPPQLVEEKENLI 395 >gi|117924031|ref|YP_864648.1| arginine decarboxylase [Magnetococcus sp. MC-1] gi|117607787|gb|ABK43242.1| arginine decarboxylase [Magnetococcus sp. MC-1] Length = 644 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 27/232 (11%), Positives = 65/232 (28%), Gaps = 28/232 (12%) Query: 14 LLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM--DGTTSSSLYEV 63 L + + + +L A +K + + G S E+ Sbjct: 90 LQDRITRLNRAFTESRSRLNYAGHYQGVYPVKVNQDRHVVSEVVASGTPMGLEVGSKPEL 149 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 +L YKD + + + F +++ ++ A + L ++ Sbjct: 150 VLAMAYMDRTPLIICNGYKDRDYIELALRATGLGFPIFVVVDRLEELAPIIDLAKSLNVS 209 Query: 124 PSVS-------YSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCE 168 P++ ++ FS+ G + + + + ++ L H + Sbjct: 210 PNLGLRARLLTEGVGKWSESAGGFSKFGLTAGEILLAVNQLEREGLKESLKLLHMHQGSQ 269 Query: 169 NKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 + E IE++ +GGG+ + C Sbjct: 270 ISLLDVVRQSAQEIVRFYLELRKMGCPIEYVDVGGGLGVDYEGLSSSAPCSV 321 >gi|153004826|ref|YP_001379151.1| arginine decarboxylase [Anaeromyxobacter sp. Fw109-5] gi|152028399|gb|ABS26167.1| arginine decarboxylase [Anaeromyxobacter sp. Fw109-5] Length = 660 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 78/303 (25%), Gaps = 38/303 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMD--- 53 P + + L + A ++ + +K + + + Sbjct: 75 PCVVRFQDVLRARVKQINEAFAKAVAEMGYGARYLGVYPIKVNQMREVVEEILDAGAPYN 134 Query: 54 -GTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 G + S E+++ E YKD E + + + + K + Sbjct: 135 YGLEAGSKGELLVVLGMNTNPEALTICNGYKDEEYLRLALLGRKLGRKVIVVIEKLSELP 194 Query: 112 QKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKIES--------EIK 156 Q L + + P + + F++ G + I + + Sbjct: 195 QLLKLGEEMGVEPMIGLRSKLTTRGTGKWEGSSGDFAKFGLTVPELIHAVRILKDAKKEH 254 Query: 157 NVNGLMFHNNC---ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 L FH E + + + IE+ +GGG+ Sbjct: 255 CAKLLHFHVGSQLTEIRVVKDAVNEGARVYAKLRKMGLPIEYFDVGGGMGVDYVGVQTNG 314 Query: 214 FCQ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVE 266 Q + ++Y + V V + I + + +V Sbjct: 315 NAQPGTIASTVNYTLDEYVGDVVYNVQRVCVNEGVPEPNLVTESGRAITAHHSCIIMNVF 374 Query: 267 AHV 269 H+ Sbjct: 375 GHI 377 >gi|288925355|ref|ZP_06419289.1| arginine 2-monooxygenase [Prevotella buccae D17] gi|315606757|ref|ZP_07881767.1| arginine 2-monooxygenase [Prevotella buccae ATCC 33574] gi|288337826|gb|EFC76178.1| arginine 2-monooxygenase [Prevotella buccae D17] gi|315251612|gb|EFU31591.1| arginine 2-monooxygenase [Prevotella buccae ATCC 33574] Length = 630 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 28/256 (10%), Positives = 73/256 (28%), Gaps = 28/256 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ ++ K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTASCFQKAKEEYNYKGENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++L A+ Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNELEIIAKAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163 KL+ K L I ++ S + + S+ G + +E+ ++ + F Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWEDSGGDASKFGLNSSELLEALHMLDEKGLHDSLRLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + ++++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALREAAQFYINLHKMGYNVDFVDCGGGLGVDYDGTRSSSSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEA 236 ++Y +A Sbjct: 306 SIQEYVNDCIYTFVDA 321 >gi|297622332|ref|YP_003703766.1| arginine decarboxylase [Truepera radiovictrix DSM 17093] gi|297163512|gb|ADI13223.1| arginine decarboxylase [Truepera radiovictrix DSM 17093] Length = 637 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 27/234 (11%), Positives = 65/234 (27%), Gaps = 27/234 (11%) Query: 11 KQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYMD----GTTSSSLYE 62 + +L R+ G + +K + +TL + G + S E Sbjct: 74 ENRLERLNRAFAEAREKFGYESHYQGVFPIKVNQRRVVVETLAEAGARFRTGVEAGSKAE 133 Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ------KLH 115 + L + E +KD + + + N V L KF + A+ ++ Sbjct: 134 LALCLVQDIHPEALLCCNGFKDDDFIRLALWGRRLGKNVVITLEKFTELARVLRISEEMG 193 Query: 116 KKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNN 166 + L + + + + + G + + + + H Sbjct: 194 IRPALGLRYKLHAQGSGQWEDSGGDRAKFGLSTSEMLSVTQSLRERGMLDTLVMVHCHVG 253 Query: 167 CE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 + + E +I ++++GGG+ + Sbjct: 254 SQVTDIRKIRTAVREAAQTYVELRELGVEIRYLNVGGGLAVDYDGSKTSFYASA 307 >gi|325914460|ref|ZP_08176804.1| arginine decarboxylase [Xanthomonas vesicatoria ATCC 35937] gi|325539230|gb|EGD10882.1| arginine decarboxylase [Xanthomonas vesicatoria ATCC 35937] Length = 628 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 103/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+L Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELKLV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L K GL + ++ + + G + ++ ++ Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V E H+ + + G L+ G+ + Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|224536691|ref|ZP_03677230.1| hypothetical protein BACCELL_01567 [Bacteroides cellulosilyticus DSM 14838] gi|224521782|gb|EEF90887.1| hypothetical protein BACCELL_01567 [Bacteroides cellulosilyticus DSM 14838] Length = 630 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 26/256 (10%), Positives = 75/256 (29%), Gaps = 28/256 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ + G K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTSSCFRQAAEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + ++ +++L A+ Sbjct: 126 KPELHAVIAINSDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELKLIAKMAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163 +L+ + I ++ S + + S+ G + +E+ + + F Sbjct: 186 QLNVMPNIGIRIKLASSGSGKWEDSGGDASKFGLSSSELLEALDFLDSKGLKDCLKLIHF 245 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + + + ++E++ +GGG+ + Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHAMGFKVEFVDIGGGLGVDYDGTRSSSSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEA 236 ++Y +A Sbjct: 306 SIQEYVNDSISTLVDA 321 >gi|6502941|gb|AAF14518.1|AF139900_1 ornithine decarboxylase [Plasmodium falciparum] Length = 948 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 58/219 (26%), Gaps = 8/219 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I T I+ QK+L V ++K + L +S+ Sbjct: 363 IDTSVVCINLQKILAQYVRFKKNL--PHVTPFYSVKSNNDEVVIKFLYGLNCNFDCASIG 420 Query: 62 EVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + + + K + + + K + Sbjct: 421 EISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHPKCSL 480 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 LRIN K ++ E+ + N+ G+ FH K+ F Sbjct: 481 ILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAKKHNLNIVGVSFHVGSNTKNLFDFCLA 540 Query: 179 LKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214 +K F I+LGGG + K Sbjct: 541 IKLCRDVFDMSSNMGFNFYIINLGGGYPEELEYDNAKKH 579 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%) Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302 + V D + +I D + + N Y A V G+SC D+ Sbjct: 830 YFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMNFNLYLANVFGQSCDGLDM 889 Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + I D + +E Y + FNG Sbjct: 890 INSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 932 >gi|282859014|ref|ZP_06268150.1| arginine 2-monooxygenase [Prevotella bivia JCVIHMP010] gi|282588182|gb|EFB93351.1| arginine 2-monooxygenase [Prevotella bivia JCVIHMP010] Length = 630 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 37/329 (11%), Positives = 89/329 (27%), Gaps = 46/329 (13%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ +K K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTASCFDKAKKEYDFKAENFIIYPIKVNQMQPVVEEIITHGRKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ ++++ A+ Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIEVIARAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163 KL+ K L I ++ S + S+ G + +++ ++ + F Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALELLDSKGLHDSLKLIHF 245 Query: 164 HNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + L +E++ GGG+ + Sbjct: 246 HIGSQITKIRRIQVALNEAGQYYVNLRKMGYNVEFVDCGGGLGVDYDGTRSSSSESSVNY 305 Query: 221 FSEKYSVQI------------------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 ++Y E G ++ + + L VL+ + + + Sbjct: 306 SIQEYVNDCVYTFVDAANKNDIPHPNIITESGRSLAAHHSVLVIDVLETASLPEMPEEFE 365 Query: 263 SSVEAHVPDYLLYQESATIYPNTGPYTAM 291 + H LY I Sbjct: 366 AKETDHQLVRDLYHIWDNIDKRNMLEDWH 394 >gi|113953852|ref|YP_731930.1| arginine decarboxylase [Synechococcus sp. CC9311] gi|113881203|gb|ABI46161.1| arginine decarboxylase [Synechococcus sp. CC9311] Length = 644 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 74/268 (27%), Gaps = 32/268 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + L + L+ + A + + +KC + + L ++ Sbjct: 65 PLLIRFDDILEDRLERLHAAFERAVTRYDYEGRYQGVFPVKCNQQRHVVEELVTCGRRWH 124 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ E YKD + + ++ Sbjct: 125 FGLEAGSKAELLIALSLMDDPEALLICNGYKDQRYIETAILARRLGRRPVVVIEQPDEVQ 184 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIES--------EIK 156 + D +Q+L + I +S ++ G + I + + Sbjct: 185 RIIDASQELGAAPLIGIRARLSSRSTGRWGSSVGDKAKFGLPAPEIIGAVEALRDANLLS 244 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + L FH + + L+ + E + ++ +GGG+ Sbjct: 245 ELRLLHFHVGSQINDIVVVKDALQEASRLYVELHALGAPMGYLDVGGGLGIDYDG-SRTA 303 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 + Y+ + E N Sbjct: 304 TAASTNYSLQNYANDVVATVKEGCEPNN 331 >gi|189465062|ref|ZP_03013847.1| hypothetical protein BACINT_01406 [Bacteroides intestinalis DSM 17393] gi|189437336|gb|EDV06321.1| hypothetical protein BACINT_01406 [Bacteroides intestinalis DSM 17393] Length = 630 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 26/256 (10%), Positives = 75/256 (29%), Gaps = 28/256 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ + G K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTSSCFRQAAEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + ++ +++L A+ Sbjct: 126 KPELHAVIAINSDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELKLIAKMAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163 +L+ + I ++ S + + S+ G + +E+ + + F Sbjct: 186 QLNVMPNIGIRIKLASSGSGKWEDSGGDASKFGLSSSELLEALDFLESKGLKDCLKLIHF 245 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + + + ++E++ +GGG+ + Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHAMGFKVEFVDIGGGLGVDYDGTRSSSSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEA 236 ++Y +A Sbjct: 306 SIQEYVNDSISTLVDA 321 >gi|224025224|ref|ZP_03643590.1| hypothetical protein BACCOPRO_01958 [Bacteroides coprophilus DSM 18228] gi|224018460|gb|EEF76458.1| hypothetical protein BACCOPRO_01958 [Bacteroides coprophilus DSM 18228] Length = 630 Score = 67.1 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 87/313 (27%), Gaps = 49/313 (15%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ G K ++ +K + + + + Sbjct: 59 PMLVRFPDILDNRIEKISNCFQQAADEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ ++ YKD + ++ +++L Sbjct: 119 LGLEAGSKPELHAVIAINTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKLNELR 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156 A++L+ + + I ++ S + + S+ G + +E+ Sbjct: 179 LISRIAKQLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFIEKKDMKD 238 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + + + +E++ +GGG+ Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHQLGFPVEFVDIGGGLGVDYDGTRSSY 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G ++ + + L VL+ + Sbjct: 299 SESSVNYSIQEYVNDSISILVDASNKNGIPHPNIITESGRSLTAHHSVLIFEVLETASLP 358 Query: 256 KNLVIVDSSVEAH 268 + H Sbjct: 359 SMDEEFEVGPNDH 371 >gi|218263072|ref|ZP_03477317.1| hypothetical protein PRABACTJOHN_02998 [Parabacteroides johnsonii DSM 18315] gi|218223005|gb|EEC95655.1| hypothetical protein PRABACTJOHN_02998 [Parabacteroides johnsonii DSM 18315] Length = 630 Score = 67.1 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 82/306 (26%), Gaps = 46/306 (15%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ + G K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKIANCFKQASDEYGYKAQNFIIYPIKVNQMRPVVEEIIGHGKKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ YKD + + + K + Sbjct: 126 KPELHAVIAVNTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKINELTLIAKMAK 185 Query: 119 GLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMF 163 L + P++ S + S+ G + +E+ + + F Sbjct: 186 QLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLEKKDLTDCLKLIHF 245 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + + + IE++ +GGG+ + + Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHAMGFNIEFVDIGGGLGVDYDGTRSSNSESSVNY 305 Query: 221 FSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 ++Y I E G ++ + + L VL+ + + + Sbjct: 306 SIQEYVNDSISTMVDVSDKNGIPHPNIITESGRSLTAHHSVLIFEVLETATLPEMDEDFE 365 Query: 263 SSVEAH 268 S H Sbjct: 366 VSESDH 371 >gi|242238002|ref|YP_002986183.1| arginine decarboxylase [Dickeya dadantii Ech703] gi|242130059|gb|ACS84361.1| arginine decarboxylase [Dickeya dadantii Ech703] Length = 657 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 75/265 (28%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + + A G L+ +K + + L G Sbjct: 86 PALFCFPQILQHRLRSINAAFRRARESFGYEGGYFLVYPIKVNQHRRVIEALVNSGEPLG 145 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 146 LEAGSKAELMAVLAHAGMTRTVIVCNGYKDREYIRLALIGEKIGHKVYLVIEKMTEIKLV 205 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G + ++ Sbjct: 206 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAAQVLHLVELLRQANRLDSL 265 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 266 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 325 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + GEA Sbjct: 326 S-VNYGLNEYANNVIWGIGEACNEY 349 >gi|22297071|gb|AAM94459.1| ornithine decarboxylase [Daucus carota] Length = 251 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 64/236 (27%), Gaps = 10/236 (4%) Query: 35 ALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEID--AVLS 91 A+KC L +S E+ + K A Sbjct: 2 AVKCNPEPSFLSMLAAMGSNFDCASRAEIEYVLSLGISPGRIVFANPCKPESDIIFAEKV 61 Query: 92 NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI 151 + +++ ++ K K K + ++ + + E Sbjct: 62 GVNLTTYDSEDEVYKIKKHHPKCELLLRIKPMNDGNARCPMGPKY-GALPEEVEPLLRIA 120 Query: 152 ESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI--HFT 205 ++ V+G+ FH N +A + E ++++ + +GGG Sbjct: 121 QASRLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETADKFGMSKMNVLDIGGGFTSGHQ 180 Query: 206 DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV 261 + FS + + I EPG TL TT++ Sbjct: 181 FTTAATAVRSALQQHFSNEPELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYW 236 >gi|154495143|ref|ZP_02034148.1| hypothetical protein PARMER_04190 [Parabacteroides merdae ATCC 43184] gi|154085693|gb|EDN84738.1| hypothetical protein PARMER_04190 [Parabacteroides merdae ATCC 43184] Length = 630 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 82/306 (26%), Gaps = 46/306 (15%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ + G K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKIANCFKQASDEYGYKAQNFIIYPIKVNQMRPVVEEIIGHGKKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ ++ YKD + + + K + Sbjct: 126 KPELHAVIAVNTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKINELTLIAKMAK 185 Query: 119 GLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMF 163 L + P++ S + S+ G + +E+ + + F Sbjct: 186 QLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLEKKDLTDCLKLIHF 245 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + + + IE++ +GGG+ + + Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHAMGFNIEFVDIGGGLGVDYDGTRSSNSESSVNY 305 Query: 221 FSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 ++Y I E G ++ + + L VL+ + + + Sbjct: 306 SIQEYVNDSISTMVDASDKNGIPHPNIITESGRSLTAHHSVLIFEVLETATLPEMDEDFE 365 Query: 263 SSVEAH 268 S H Sbjct: 366 VSESDH 371 >gi|188574481|ref|YP_001911410.1| arginine decarboxylase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188518933|gb|ACD56878.1| biosynthetic arginine decarboxylase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 628 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 105/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+LN Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNLV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L K GL + ++ + + G + ++ ++ Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V + E H+ + + G L+ G+ + Sbjct: 359 VPDAHADEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|122878996|ref|YP_198859.6| arginine decarboxylase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 628 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 105/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+LN Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNLV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L K GL + ++ + + G + ++ ++ Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V + E H+ + + G L+ G+ + Sbjct: 359 VPDAHADEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|78214019|ref|YP_382798.1| arginine decarboxylase [Synechococcus sp. CC9605] gi|78198478|gb|ABB36243.1| arginine decarboxylase [Synechococcus sp. CC9605] Length = 642 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 27/234 (11%), Positives = 67/234 (28%), Gaps = 31/234 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + L + L+ + A + A +KC + + L Sbjct: 63 PLLIRFDDILEDRLERLHAAFERAIAQYSYAGRYQGVFPVKCNQQRHVVEELVSCGKRWN 122 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ E YKD + + +++ Sbjct: 123 FGLEAGSKAELLIALSLLDDPEALLICNGYKDRLYIETAILARRLGRQPVVVIEQPDEVD 182 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156 + + ++ L + + +S ++ G + + + ++ Sbjct: 183 RIIEASKSLGAAPYIGVRAKLSSRSTGRWGSSVGDKAKFGLSIPELLATVERLRDNNLLQ 242 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK 207 ++ L FH + L+ I E + ++ +GGG+ Sbjct: 243 DLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMGFLDVGGGLGIDYD 296 >gi|77748748|ref|NP_644224.2| arginine decarboxylase [Xanthomonas axonopodis pv. citri str. 306] gi|48474491|sp|Q8PFQ5|SPEA_XANAC RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC Length = 628 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 102/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107 G + S E+M YKD E + + T + K Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTLV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L K GL + ++ + + G + ++ ++ Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V E H+ + + G L+ G+ + Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|166713840|ref|ZP_02245047.1| arginine decarboxylase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 628 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 104/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+LN Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNLV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L K GL + ++ + + G + ++ ++ Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V E H+ + + G L+ G+ + Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|81299846|ref|YP_400054.1| arginine decarboxylase [Synechococcus elongatus PCC 7942] gi|81168727|gb|ABB57067.1| arginine decarboxylase [Synechococcus elongatus PCC 7942] Length = 647 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 27/267 (10%), Positives = 73/267 (27%), Gaps = 32/267 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + L + ++ A + A +KC + ++L Y Sbjct: 76 PLLIRFPDILEDRIERLNACFAKAIARYNYAGEYRGVFPVKCNQQRHLIESLVNYGRPFQ 135 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--D 109 G + S E+++ YKD + + + + + + D Sbjct: 136 FGLEAGSKPELLIALAHLDTPGALLICNGYKDRDYIETAILGRRLGKTPILVIEQLEEVD 195 Query: 110 KAQKLHKKIGLRINPSVSYS-----KFILADPNRPFSRLGEKCKDKIES--------EIK 156 A +++G+ V ++ G + + + + Sbjct: 196 VAIAASQRLGIEPILGVRAKLNARGMGRWGSSAGDRAKFGLTMPEIVAAVEKLQAANLLH 255 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + L FH + ++ + + + ++ +GGG+ Sbjct: 256 CLQLLHFHIGSQISDISVLKDAIQEAAQIYVQLAALGADMRYLDVGGGLGVDYDGSKTNF 315 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTN 240 + + Y+ + +A + Sbjct: 316 HASK-NYNMQTYANDVVATIKDACQAH 341 >gi|56750519|ref|YP_171220.1| arginine decarboxylase [Synechococcus elongatus PCC 6301] gi|56685478|dbj|BAD78700.1| arginine decarboxylase [Synechococcus elongatus PCC 6301] Length = 651 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 27/267 (10%), Positives = 73/267 (27%), Gaps = 32/267 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + L + ++ A + A +KC + ++L Y Sbjct: 80 PLLIRFPDILEDRIERLNACFAKAIARYNYAGEYRGVFPVKCNQQRHLIESLVNYGRPFQ 139 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--D 109 G + S E+++ YKD + + + + + + D Sbjct: 140 FGLEAGSKPELLIALAHLDTPGALLICNGYKDRDYIETAILGRRLGKTPILVIEQLEEVD 199 Query: 110 KAQKLHKKIGLRINPSVSYS-----KFILADPNRPFSRLGEKCKDKIES--------EIK 156 A +++G+ V ++ G + + + + Sbjct: 200 VAIAASQRLGIEPILGVRAKLNARGMGRWGSSAGDRAKFGLTMPEIVAAVEELQAANLLH 259 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + L FH + ++ + + + ++ +GGG+ Sbjct: 260 CLQLLHFHIGSQISDISVLKDAIQEAAQIYVQLAALGADMRYLDVGGGLGVDYDGSKTNF 319 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTN 240 + + Y+ + +A + Sbjct: 320 HASK-NYNMQTYANDVVATIKDACQAH 345 >gi|294624828|ref|ZP_06703487.1| arginine decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600861|gb|EFF44939.1| arginine decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 628 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 102/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107 G + S E+M YKD E + + T + K Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTLV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L K GL + ++ + + G + ++ ++ Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V E H+ + + G L+ G+ + Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|294667461|ref|ZP_06732678.1| arginine decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602794|gb|EFF46228.1| arginine decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 628 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 102/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107 G + S E+M YKD E + + T + K Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTLV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L K GL + ++ + + G + ++ ++ Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V E H+ + + G L+ G+ + Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|22299350|ref|NP_682597.1| arginine decarboxylase [Thermosynechococcus elongatus BP-1] gi|48474852|sp|Q8DHY6|SPEA_THEEB RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|22295533|dbj|BAC09359.1| arginine decarboxylase [Thermosynechococcus elongatus BP-1] Length = 637 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 95/313 (30%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P L L + ++ A K + +KC + + L ++ Sbjct: 67 PLLLRFSDILEDRIERLNACFARAIARYGYQGAYKGVFPIKCNQQRHIIEALVRFGQSHQ 126 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105 G + S E+++ YKD I+ ++ Sbjct: 127 FGLEAGSKPELLIALAMLNTPGALLICNGYKDRSYIETAILARRLGHTSIIVLEQPEEVA 186 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156 + +Q L + + + +S + + G + + + + Sbjct: 187 EVIAVSQALGIEPIVGVRAKLSTQGVGRWGTSAGDRAKFGLTVPEILTAVEQLRAAGMLN 246 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD------- 206 + L FH + + ++ + +G ++++ +GGG+ Sbjct: 247 ALQLLHFHIGSQISAISVIKDAIREAGQIYGELVRLGANMQYLDVGGGLGVDYDGSKTNF 306 Query: 207 ---KDYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ + + Q E G AI ++ + L VL +SE K Sbjct: 307 HASKNYSMQNYASDVVAGIKDACRQRGIPDPTLISESGRAIASHQSVLIFNVLGVSEVPK 366 Query: 257 NLVIVDSSVEAHV 269 ++ E + Sbjct: 367 ITPEPATAEEHLI 379 >gi|21110327|gb|AAM38760.1| biosynthetic arginine decarboxylase [Xanthomonas axonopodis pv. citri str. 306] Length = 645 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 102/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 76 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 135 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107 G + S E+M YKD E + + T + K Sbjct: 136 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTLV 195 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L K GL + ++ + + G + ++ ++ Sbjct: 196 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 255 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 256 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 315 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 316 SINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 375 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V E H+ + + G L+ G+ + Sbjct: 376 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 432 Query: 314 IGDR 317 I D Sbjct: 433 IDDL 436 >gi|300934325|ref|ZP_07149581.1| putative diaminopimelate decarboxylase [Corynebacterium resistens DSM 45100] Length = 517 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 68/217 (31%), Gaps = 21/217 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P+++++ + +NL + K GVK + A K + + + G +S E Sbjct: 58 PFHVLNPAQFRSNLRGFAEVCKAVGVKATIYFARKANKSECWIPVVAEEAHGVDVASGPE 117 Query: 63 VMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + ++ L + ++ ++ S+L + A K+ Sbjct: 118 FIGAISGGVPAHNLVVTGAEKPESLLELALRHGSLLVVDSPSELFRVSTLAAKVETGSQA 177 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE---------IKNVNGLMFHNNCENKS 171 ++ + + SR G + + + N G FH N + Sbjct: 178 QLLLRLLPDT-------QTDSRFGTSASEWMWALASLSEKQRTCINCAGASFHLNGYSAE 230 Query: 172 FLCFSAMLKN-IEKEFGHFITQIEWISLGGGIHFTDK 207 A L + ++ + +GGG Sbjct: 231 ERGHQAHLALDFLEVLKTDGWRVHTLDIGGGFSIQYC 267 Score = 49.4 bits (116), Expect = 9e-04, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE--KPVKIGDRISFEDVAGYNINRK-N 332 + +AT P A V G SC+ D+ + + GD + + + AGY +++ + Sbjct: 427 RRNATKEREDEPTAACVGGSSCMEYDMLTWRIVPLQRRPQRGDLLIYHNTAGYQMDKNES 486 Query: 333 WFNGINMPTIAVKNVDGTIKAIRE 356 F+ + +P V + +GT+ I Sbjct: 487 EFHQLRLPMRFVYDGEGTLPRIDR 510 >gi|84621852|ref|YP_449224.1| arginine decarboxylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58424437|gb|AAW73474.1| biosynthetic arginine decarboxylase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84365792|dbj|BAE66950.1| biosynthetic arginine decarboxylase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 645 Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 105/364 (28%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P + L L A G + +K G+ TL + Sbjct: 76 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 135 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+LN Sbjct: 136 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNLV 195 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L K GL + ++ + + G + ++ ++ Sbjct: 196 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 255 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N L FH + + + ++ + F +I + +GGG+ + + +C Sbjct: 256 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 315 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E++ +I E G A+ + L V ++ + + Sbjct: 316 SINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 375 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V + E H+ + + G L+ G+ + Sbjct: 376 VPDAHADEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 432 Query: 314 IGDR 317 I D Sbjct: 433 IDDL 436 >gi|262193352|ref|YP_003264561.1| arginine decarboxylase [Haliangium ochraceum DSM 14365] gi|262076699|gb|ACY12668.1| arginine decarboxylase [Haliangium ochraceum DSM 14365] Length = 650 Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 86/299 (28%), Gaps = 49/299 (16%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM- 52 I TP L L + ++ +A + + +K + + + ++ Sbjct: 70 IPTPILLRFSDILRSRIELLNQAFGSAIAEYEYRGQYRGVYPIKVNQSRIVVQEIIEFGR 129 Query: 53 ---DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVL------SNCDTIIFNTVS 102 G + S E++ + YKD E ++ Sbjct: 130 PYHYGLEAGSKPELLAVMAVHDDPDALIICNGYKDDEYIETALSASRLGRKVVLVIEKPD 189 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI------ 155 +++ AQ L + + + +S + + + G + +++ Sbjct: 190 EIDHIHSVAQSLGIRPTVGMRARLSARGAGRWEQSGGDRSKFGLSPAEMLQAVDKLRSWG 249 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDK-- 207 + L FH + S L+ + F +++ +GGG+ Sbjct: 250 QLDGLELLHFHLGSQISSIRSIKTALREAGRLFVELHKLGCEGLQYFDVGGGLGVDYDGS 309 Query: 208 ---------------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 V Q + + +E I E G A+ + + L VL + Sbjct: 310 QTNFASSMNYTVQEYANDVVFTIQEICDEAEVPHPNIVTESGRAVAAHHSVLVVDVLAV 368 >gi|282877082|ref|ZP_06285924.1| arginine 2-monooxygenase [Prevotella buccalis ATCC 35310] gi|281300764|gb|EFA93091.1| arginine 2-monooxygenase [Prevotella buccalis ATCC 35310] Length = 630 Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 26/260 (10%), Positives = 71/260 (27%), Gaps = 28/260 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ K K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTASCFAQAAKEYDYKAENFIIYPIKVNQMQPVVEEIISHGQKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++L+ A+ Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVIEKLNELDIIAKAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163 K+ + + I ++ S + S+ G + + + ++ + F Sbjct: 186 KIGVRPNIGIRIKLASSGSGKWADSGGDASKFGLNSSELLLALKMLEEKGLKDCLHLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + ++++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALREAAQYYINLHKMGYNVDFVDCGGGLGVDYDGTRSSSSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTN 240 ++Y +A N Sbjct: 306 SIQEYVNDCIYTFIDAANKN 325 >gi|288801683|ref|ZP_06407125.1| arginine 2-monooxygenase [Prevotella melaninogenica D18] gi|302344910|ref|YP_003813263.1| arginine 2-monooxygenase [Prevotella melaninogenica ATCC 25845] gi|288335725|gb|EFC74158.1| arginine 2-monooxygenase [Prevotella melaninogenica D18] gi|302149054|gb|ADK95316.1| arginine 2-monooxygenase [Prevotella melaninogenica ATCC 25845] Length = 630 Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 29/260 (11%), Positives = 74/260 (28%), Gaps = 28/260 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ RK K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTSSCFEKARKEYDFKAENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++++ A+ Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIDLIARAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163 KL+ K L I ++ S + S+ G + +++ ++ + F Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWADSGGDASKFGLTSSELLQALETLDNKGLHDCLHLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + ++++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALNEAAQYYVNLRKMGYNVDFVDCGGGLGVDYDGTRSASSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTN 240 ++Y +A N Sbjct: 306 SIQEYVNDCVYTFVDAANKN 325 >gi|333026504|ref|ZP_08454568.1| putative orn/DAP/Arg decarboxylase, family 2 [Streptomyces sp. Tu6071] gi|332746356|gb|EGJ76797.1| putative orn/DAP/Arg decarboxylase, family 2 [Streptomyces sp. Tu6071] Length = 448 Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 43/367 (11%), Positives = 91/367 (24%), Gaps = 32/367 (8%) Query: 8 LIDKQKLLNNLDTALYIRK------NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 L+D + V+ A++ + L + G +S Sbjct: 42 LLDVTGIRRTARALQSAFAPLVAEGGPAVRHTFAVRATPLVPVLRLLYEDRIGAEVASAA 101 Query: 62 EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ L G T + E+ L + + + +L + + Sbjct: 102 ELALARAAGVQPGHTVLDSPTKTVAELREALGSGVLVDVDDAQELERLDALRGEAAATST 161 Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN-------KS 171 + + + +E + L H+ +N + Sbjct: 162 FGVRVDPHAGAERRAVFGVALGHEGAREWILSAFAERPWLTRLHAHSEVKNAGGVAPERL 221 Query: 172 FLCFSAMLKNIEKEFGHFITQ---------IEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + E+ + G + LKE Sbjct: 222 AEGVRKVYELAEEINAAAGRRQVDALALGGGLAAGAREGDTGDGDGADFAGYAALLKETV 281 Query: 223 EKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE---AHVPDYLLYQ 276 + G +++ L V + + V + H L Sbjct: 282 PGLFDGRYALVTGFGRSLLAGHGFLLARVEYVRAMGGRRLAVTHAGTRMAGHACGRRLAA 341 Query: 277 ESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 A P GP A + G + G++ ++ GD ++ D Y R ++ Sbjct: 342 YDAQGRPKEGPALAQDLAGPAQFDGELLASGVELPELEQGDWLAVLDTGAYGFARHQAYD 401 Query: 336 GINMPTI 342 + P I Sbjct: 402 SLTRPGI 408 >gi|294645219|ref|ZP_06722938.1| putative arginine decarboxylase [Bacteroides ovatus SD CC 2a] gi|292639462|gb|EFF57761.1| putative arginine decarboxylase [Bacteroides ovatus SD CC 2a] Length = 330 Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 27/265 (10%), Positives = 78/265 (29%), Gaps = 31/265 (11%) Query: 2 IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52 + +P + L N ++ + G K ++ +K + + + + Sbjct: 56 VASPMLVRFPDILDNRIEKMSSCFKQAAEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGK 115 Query: 53 ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102 G + S E+ ++ YKD + ++ ++ Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIYLVVEKMN 175 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156 +L A++L+ + + I ++ S + + S+ G + +E+ Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKG 235 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + + +E++ +GGG+ Sbjct: 236 LKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFVDIGGGLGVDYDGTR 295 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGE 235 + + ++Y + Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVD 320 >gi|68537075|ref|YP_251780.1| putative diaminopimelate decarboxylase [Corynebacterium jeikeium K411] gi|260579419|ref|ZP_05847301.1| diaminopimelate decarboxylase [Corynebacterium jeikeium ATCC 43734] gi|68264674|emb|CAI38162.1| putative diaminopimelate decarboxylase [Corynebacterium jeikeium K411] gi|258602548|gb|EEW15843.1| diaminopimelate decarboxylase [Corynebacterium jeikeium ATCC 43734] Length = 472 Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 62/214 (28%), Gaps = 14/214 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P++++ +L NL ++ + A K A + G +S E Sbjct: 35 PFHVLYPAQLRTNLRDFATTAQDMNVDCTVFFARKANKAECWLQEIAAADQGVDVASGPE 94 Query: 63 VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------AQKL 114 ++ G + D + + + TI ++ +L + D A Sbjct: 95 LVGALAGGIRGTKLVITGAEKADNLLWLGIRHGCTIAADSPGELQRILDITRRETSAHHT 154 Query: 115 HKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173 + + + + +S + + ++ G FH N + Sbjct: 155 DGHTRVLLRILPAEQTESRFGCTPQEWSACISGLPEL--GKHVDIVGSCFHLNEYSSEQR 212 Query: 174 CFSAMLKN-IEKEFGHFITQIEWISLGGGIHFTD 206 A +E + + + +GGG Sbjct: 213 GKEAHRSLDFMRELRRKGWRADTLDIGGGFSVRY 246 >gi|255547510|ref|XP_002514812.1| ornithine decarboxylase, putative [Ricinus communis] gi|223545863|gb|EEF47366.1| ornithine decarboxylase, putative [Ricinus communis] Length = 203 Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 44/141 (31%), Gaps = 5/141 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P+Y++D +++ ++ + VK A+K + L +S E+ Sbjct: 55 PFYILDIGVVISLVEKWSHHL--PHVKPFYAVKRNNESALLIVLATLGANFDCASQAEIE 112 Query: 65 LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + Y K A F++ +++K + + + Sbjct: 113 AILGLGISPDRILYANPCKSVSHIKYAARVGVYLTTFDSKEEVDKIRKWHPQCSLLLRAE 172 Query: 122 INPSVSYSKFILADPNRPFSR 142 I S + A+ F R Sbjct: 173 IQNDKSSWIHLAANMAHIFLR 193 >gi|327312900|ref|YP_004328337.1| arginine 2-monooxygenase [Prevotella denticola F0289] gi|326945361|gb|AEA21246.1| arginine 2-monooxygenase [Prevotella denticola F0289] Length = 630 Score = 66.3 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 29/256 (11%), Positives = 75/256 (29%), Gaps = 28/256 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ RK G K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTSSCFEKARKEYGFKAENFIIYPVKVNQMQPVVEEIISHGRKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++++ A+ Sbjct: 126 KPELHAVIAVQCQSDSLIVCNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIDLIARAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163 KL+ K L I ++ S + S+ G + +++ ++ + F Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALETLDEKGLHDCLHLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + ++++ GGG+ + + Sbjct: 246 HIGSQITKIRRIQTALNEAAQYYVNLRRMGYGVDFVDCGGGLGVDYDGTRSSNSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEA 236 ++Y +A Sbjct: 306 SIQEYVNDCVYTFVDA 321 >gi|15836749|ref|NP_297437.1| arginine decarboxylase [Xylella fastidiosa 9a5c] gi|48474999|sp|Q9PH02|SPEA_XYLFA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|9104933|gb|AAF82957.1|AE003868_3 biosynthetic arginine decarboxylase [Xylella fastidiosa 9a5c] Length = 628 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 98/364 (26%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P L L + L A G + +K G+ L + Sbjct: 59 PLLLRFPDILGHRLGKLQAAFAQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+L Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRMV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L GL + ++ + + G + ++ + Sbjct: 179 LEEAKTLGVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADCL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N + FH + + + ++ + F +I + +GGG+ + + C Sbjct: 239 NVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSDC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E Y +I E G A+ + L V ++ + Sbjct: 299 SINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V E H+ + I G LA G+ + Sbjct: 359 VPGVCDDEPAVVRHMREIYGELDARPAIELFYEAQHFHAEG---LAAYTLGQIDLVHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|329934469|ref|ZP_08284548.1| lysine/ornithine decarboxylase [Streptomyces griseoaurantiacus M045] gi|329306065|gb|EGG49920.1| lysine/ornithine decarboxylase [Streptomyces griseoaurantiacus M045] Length = 508 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 24/231 (10%), Positives = 60/231 (25%), Gaps = 19/231 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYM---DGTT 56 + +P ++ + + N + + + + ++ A K + + L G Sbjct: 33 LGSPLNVLLPEAVAANAERFRSVLRRHHLAGRVYFAHKANRSSALVRRLAACDTAAVGID 92 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 +SL E+ F G+ + T+ ++ +L++ +K Sbjct: 93 VASLEELRHALASGFSGDRVMATGPKDPEFLWLAARVGATVNLDSPGELDELAALVRKYG 152 Query: 116 KKIGLRIN----PSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMF 163 + SR G + ++ + GL Sbjct: 153 LARTDVLVRLSGFESDPGPGAGTRLLARRSRFGTPVAEAEKLWTALERHADSVRLVGLAH 212 Query: 164 HN-NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 H + + E + +GGG + + Sbjct: 213 HLDTTGLEEKARALERCVLLMDECRARGLAPRAVDIGGGFGAAYVEDAGEW 263 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 41/128 (32%), Gaps = 23/128 (17%) Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL--------- 274 ++ +YLEPG A+V V+++ + + + D + Sbjct: 337 EHLDDLYLEPGRALVDQCGLSLARVVEVRPLGEAPDRYLVRLAMNAGDVSMEEHGVLADP 396 Query: 275 ------------YQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISF 320 GP + G CL D+ F + + GD ++F Sbjct: 397 VLLPRGESAPVSGAADGGPAETEGPVGVHLVGNLCLEADLITRRLVFLPRLPRPGDLLAF 456 Query: 321 EDVAGYNI 328 + AGY + Sbjct: 457 VNTAGYLM 464 >gi|227115165|ref|ZP_03828821.1| arginine decarboxylase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 660 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A G L+ +K + ++L G Sbjct: 88 PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M LGH N I L + ++ +S++ Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRLV 207 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAVQVLQLVEMLREAGKLDSL 267 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351 >gi|144899973|emb|CAM76837.1| ornithine decarboxylase [Magnetospirillum gryphiswaldense MSR-1] Length = 306 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 81/270 (30%), Gaps = 23/270 (8%) Query: 48 LNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQL 104 L +S EV L E + ++ K A F++ ++L Sbjct: 2 LVGLGSSFDVASRGEVDLCLENGARADNISFGNTIKKQSDIAYAYSKGVRLYAFDSEAEL 61 Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH 164 K + A + + + L+ + + K + G+ FH Sbjct: 62 EKLAESAPGSRVFCRILMTCDGAEW--PLSRKFGCEIEMAKDLLVKARELGMDPYGVSFH 119 Query: 165 NNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDY--PVKDFCQRLK 219 + + + F ++ ++LGGG + V+ + + Sbjct: 120 VGSQQTDLNQWDIAVGKAAMLFTALNEAGIDLKMMNLGGGFPAKYRTDIPAVERYADAVM 179 Query: 220 EFSEKYS----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------A 267 + + +EPG ++V + L V+ IS+ + + ++ Sbjct: 180 HAMTNHFGNALPAMIIEPGRSLVGDAGVLEAEVVLISKKSYDEDVRWVYLDIGKFGGLAE 239 Query: 268 HVPDYLLYQESATIYPNTGPYTAMVCGRSC 297 + + + Y+ ++ + +C Sbjct: 240 TMDEAIKYRIQTSVTGRKPAPSCWAV-PTC 268 >gi|28198049|ref|NP_778363.1| arginine decarboxylase [Xylella fastidiosa Temecula1] gi|182680677|ref|YP_001828837.1| arginine decarboxylase [Xylella fastidiosa M23] gi|48474405|sp|Q87F25|SPEA_XYLFT RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|226734335|sp|B2I6M1|SPEA_XYLF2 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|28056109|gb|AAO28012.1| biosynthetic arginine decarboxylase [Xylella fastidiosa Temecula1] gi|182630787|gb|ACB91563.1| arginine decarboxylase [Xylella fastidiosa M23] gi|307579138|gb|ADN63107.1| arginine decarboxylase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 628 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 98/364 (26%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P L L + L A G + +K G+ L + Sbjct: 59 PLLLRFPDILGHRLGKLQAAFAQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+L Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRMV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L GL + ++ + + G + ++ + Sbjct: 179 LEEAKTLDVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADCL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N + FH + + + ++ + F +I + +GGG+ + + C Sbjct: 239 NVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSDC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E Y +I E G A+ + L V ++ + Sbjct: 299 SINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V E H+ + I G LA G+ + Sbjct: 359 VPGVCDDEPAVVRHMREIYGELDARPAIELFYEAQHFHAEG---LAAYTLGQIDLVHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|261823135|ref|YP_003261241.1| arginine decarboxylase [Pectobacterium wasabiae WPP163] gi|261607148|gb|ACX89634.1| arginine decarboxylase [Pectobacterium wasabiae WPP163] Length = 659 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A G L+ +K + ++L G Sbjct: 88 PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M LGH N I L + ++ +S++ Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRMV 207 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAVQVLQLVEMLREAGKLDSL 267 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351 >gi|71899268|ref|ZP_00681430.1| Arginine decarboxylase [Xylella fastidiosa Ann-1] gi|71731001|gb|EAO33070.1| Arginine decarboxylase [Xylella fastidiosa Ann-1] Length = 628 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 98/364 (26%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P L L + L A G + +K G+ L + Sbjct: 59 PLLLRFPDILGHRLGKLQAAFAQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+L Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRMV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L GL + ++ + + G + ++ + Sbjct: 179 LEEAKTLDVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADCL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N + FH + + + ++ + F +I + +GGG+ + + C Sbjct: 239 NVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSDC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E Y +I E G A+ + L V ++ + Sbjct: 299 SINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEGR 358 Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 V E H+ + I G LA G+ + Sbjct: 359 VPGVCDDEPAVVRHMREIYGELDARPAIELFYEAQHFHAEG---LAAYTLGQIDLVHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|323343815|ref|ZP_08084042.1| arginine 2-monooxygenase [Prevotella oralis ATCC 33269] gi|323095634|gb|EFZ38208.1| arginine 2-monooxygenase [Prevotella oralis ATCC 33269] Length = 630 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 29/264 (10%), Positives = 77/264 (29%), Gaps = 28/264 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ ++ G K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTSSCFQRAKEEYGFKGENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++L+ ++ Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNELDIIAKASK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163 KL+ K L I ++ S + + S+ G + +E+ ++ + F Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWEDSGGDASKFGLTSSELLEALHILDEKGLHDSLKLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + ++++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALREAAQFYTNLHKMGYDVDFVDCGGGLGVDYDGTRSSHSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTL 244 ++Y +A N + Sbjct: 306 SIQEYVNDCIYTFVDAADKNGISH 329 >gi|71275894|ref|ZP_00652177.1| Arginine decarboxylase [Xylella fastidiosa Dixon] gi|170729357|ref|YP_001774790.1| arginine decarboxylase [Xylella fastidiosa M12] gi|226734336|sp|B0U1H6|SPEA_XYLFM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|71163271|gb|EAO12990.1| Arginine decarboxylase [Xylella fastidiosa Dixon] gi|167964150|gb|ACA11160.1| biosynthetic arginine decarboxylase [Xylella fastidiosa M12] Length = 628 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 99/364 (27%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P L L + L A G + +K G+ L + Sbjct: 59 PLLLRFPDILRHRLGKLQAAFVQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+L Sbjct: 119 GLEAGSKPELMAVLALSRQGGLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRMV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L GL + ++ + + G + ++ + Sbjct: 179 LEEAKTLGVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADCL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N + FH + + + ++ + F +I + +GGG+ + + C Sbjct: 239 NVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSDC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E Y +I E G A+ + L V ++ + Sbjct: 299 SINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEGR 358 Query: 259 ----VIVDSSVEAHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 + +V H+ + I G LA G+ + Sbjct: 359 VPGLCDDEPAVVRHMREIYGELDARPAIELFYEAQHFHAEG---LAAYTLGQIDLVHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|291569782|dbj|BAI92054.1| arginine decarboxylase [Arthrospira platensis NIES-39] Length = 653 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 95/313 (30%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIR-------KNAGV-KLLLALKCFAAWGMFDTLNQYM---- 52 P + L + ++ GV + + +KC + + L ++ Sbjct: 82 PLLIRFPDILEDRIERLNACFSKAIARYNYPGVYRGVYPVKCNQERHLIEDLVRFGEPYQ 141 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105 G + S E+++ + YKD + I+ + ++ Sbjct: 142 LGLEAGSKPELLIALACLTTPGSLLICNGYKDQKYIETAMLAQRLGRKTIIVMEQLEEVE 201 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156 +Q L + L + + + + G + I+ + Sbjct: 202 LAIAASQNLGIQPTLGVRAKLGSRGVGRWGGSTGDRAKFGLTIPEIIQVCDRLQGLGMLD 261 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------- 206 + L FH + S ++ + E ++++ +GGG+ Sbjct: 262 CLQLLHFHIGSQISSISAIKDAIREASQIYVELAKLGANMQYLDVGGGLGVDYDGSKSNA 321 Query: 207 ---KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ + ++ + + E G AI ++ + L +L SE Sbjct: 322 PASKNYNMQNYANDIVAEVKEACEEGKVNAPVLISESGRAIASHQSILVFDILGSSEPTA 381 Query: 257 NLVIVDSSVEAHV 269 + + + Sbjct: 382 ENPPTINDDDHLI 394 >gi|284052140|ref|ZP_06382350.1| arginine decarboxylase [Arthrospira platensis str. Paraca] Length = 653 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 95/313 (30%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIR-------KNAGV-KLLLALKCFAAWGMFDTLNQYM---- 52 P + L + ++ GV + + +KC + + L ++ Sbjct: 82 PLLIRFPDILEDRIERLNACFSKAIARYNYPGVYRGVYPVKCNQERHLIEDLVRFGEPYQ 141 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105 G + S E+++ + YKD + I+ + ++ Sbjct: 142 LGLEAGSKPELLIALACLTTPGSLLICNGYKDQKYIETAMLAQRLGRKTIIVMEQLEEVE 201 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156 +Q L + L + + + + G + I+ + Sbjct: 202 LAIAASQNLGIQPTLGVRAKLGSRGVGRWGGSTGDRAKFGLTIPEIIQVCDRLQGLGMLD 261 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------- 206 + L FH + S ++ + E ++++ +GGG+ Sbjct: 262 CLQLLHFHIGSQISSISAIKDAIREASQIYVELAKLGANMQYLDVGGGLGVDYDGSKSNA 321 Query: 207 ---KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ + ++ + + E G AI ++ + L +L SE Sbjct: 322 PASKNYNMQNYANDIVAEVKEACEEGKVNAPVLISESGRAIASHQSILVFDILGSSEPTA 381 Query: 257 NLVIVDSSVEAHV 269 + + + Sbjct: 382 ENPPTINDDDHLI 394 >gi|125582123|gb|EAZ23054.1| hypothetical protein OsJ_06749 [Oryza sativa Japonica Group] Length = 450 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 21/52 (40%) Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + + V G + + D + + GD + F+DV Y + FNG Sbjct: 386 KTHPSTVFGPTLDSFDEVVRGYQLPELCTGDWLVFDDVGAYTTVCSSDFNGF 437 Score = 40.9 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + +ID ++ + GV+ A+KC + L G +S Sbjct: 63 FNVIDLGEVARLFAAWWRGLR--GVRPYYAVKCNPNPALLGALAGLGAGFDCAS 114 >gi|12711388|emb|CAC28533.1| ornithine decarboxylase [Platichthys flesus] Length = 116 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 4/83 (4%) Query: 250 DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309 +++ + AH L + Y + G +C D E + Sbjct: 38 YVNDGVYGSFNCILYDHAHCLPVLHKKPKPDEIM----YPCSIWGPTCDGLDRIVEQCYL 93 Query: 310 KPVKIGDRISFEDVAGYNINRKN 332 +++GD + FE++ Y + + Sbjct: 94 PDMQVGDWLVFENMGAYTVAASS 116 >gi|148263056|ref|YP_001229762.1| arginine decarboxylase [Geobacter uraniireducens Rf4] gi|189046764|sp|A5GB52|SPEA_GEOUR RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|146396556|gb|ABQ25189.1| arginine decarboxylase [Geobacter uraniireducens Rf4] Length = 635 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 85/297 (28%), Gaps = 48/297 (16%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + + + KNA + +K + + + + G S Sbjct: 67 DVLQGRIASINRVFKNAIQENNYPAKYQTFYPIKVNQQRQVVEAIANFGKRYNIGLEVGS 126 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQ 112 E++ G G YKD E + + T++ + +L K + + Sbjct: 127 KPELVAGISFATGNNLPIICNGYKDTEYIEMVLSATKIGYDITLVVEKLFELEKIIELVK 186 Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKI--------ESEIKNVNGLMF 163 K + L I +S ++ G + + I IK V L F Sbjct: 187 KTGVQPKLGIRVKLSSKGIGKWATSGGEDAKFGLRMSEIIAAIEMLEKHDLIKCVKLLHF 246 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDK------------- 207 H + L + + IE++ +GGG+ Sbjct: 247 HIGSQITKIDKIKTALIEGARIYAEMRKLGVGIEYLDIGGGLGVDYDGSKSSNFSSVNYS 306 Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260 V + + E + I E G A V + + L T VL+ + Sbjct: 307 IEEYANDVIYQIKNICEDAGVECPNIISESGRATVAHYSVLVTNVLNTNTQNIMPDF 363 >gi|157372207|ref|YP_001480196.1| arginine decarboxylase [Serratia proteamaculans 568] gi|157323971|gb|ABV43068.1| arginine decarboxylase [Serratia proteamaculans 568] Length = 658 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A G L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLVNSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I L + ++ +S++N Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEINMV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQVLKLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEH 350 >gi|116074087|ref|ZP_01471349.1| arginine decarboxylase [Synechococcus sp. RS9916] gi|116069392|gb|EAU75144.1| arginine decarboxylase [Synechococcus sp. RS9916] Length = 659 Score = 66.3 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 33/275 (12%), Positives = 77/275 (28%), Gaps = 32/275 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + L++ + A + + +KC + + L Sbjct: 80 PLLIRFDDILEDRLESLHAAFERAITRYGYSGRYQGVFPVKCNQQRHVVEELVSCGRRWH 139 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ E YKD + + ++ Sbjct: 140 FGLEAGSKAELLIALSLIDDPEALLICNGYKDQRYIETAILARRLGRRPVVVIEQADEVQ 199 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIES--------EIK 156 + D +++L + I +S ++ G + + + ++ Sbjct: 200 RIIDASKELGAAPLIGIRARLSSRSTGRWGSSVGEKAKFGLPVPEILSTVEALREAGLLE 259 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + L FH + L+ I E + ++ +GGG+ Sbjct: 260 ELRLLHFHVGSQINDIAVVKDALQEASRIYVELHKLGAPMGYLDVGGGLGIDYDG-SRTA 318 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 + Y+ + E + T+ T V Sbjct: 319 TAASTNYSLQNYANDVVATVKEGCEPHGVTVPTLV 353 >gi|293394544|ref|ZP_06638840.1| arginine 2-monooxygenase [Serratia odorifera DSM 4582] gi|291423009|gb|EFE96242.1| arginine 2-monooxygenase [Serratia odorifera DSM 4582] Length = 658 Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A G L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLVNSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I L + ++ +S++N Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEINLV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAVQVLKLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEH 350 >gi|70953366|ref|XP_745789.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium chabaudi chabaudi] gi|56526220|emb|CAH78210.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase, putative [Plasmodium chabaudi chabaudi] Length = 923 Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 80/278 (28%), Gaps = 14/278 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I T I+ QK+L V A+K + L +S+ Sbjct: 391 IDTSVVCINLQKVLLQYIRFKRNLPR--VTPFFAVKSNDDENVIKFLYGLNCNFDCASIG 448 Query: 62 EVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKK 117 E+ F + Y K + I T +++ K Sbjct: 449 EINKLTTLFPNMSRDRIIYANTIKSPSSLKYAKEKN-INLCTFDNIDELKKICKYHPTCS 507 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + LRIN K ++ EK + N+ G+ FH K+ F Sbjct: 508 LLLRINIDFKNYKSYMSSKYGANEFEWEKILKFGKENNLNIVGVSFHVGSNTKNSFDFCQ 567 Query: 178 MLKNIEKEFG---HFITQIEWISLGGGIH----FTDKDYPVKDFCQRLKEFSEKYSVQIY 230 +K F F + + +++GGG + K L E K + + Sbjct: 568 AIKLSRDAFDLGSRFGFKFQILNIGGGYPEELEYDRARKNEKKHYCTLNEEELKKEIISF 627 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH 268 L AI N N + ++ N+ + Sbjct: 628 LNDKSAIKKNYNFHNFEKIALAINMSIDHYFKDMKDQL 665 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 18/46 (39%) Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + G+SC D+ + I D I +E Y + FNG Sbjct: 860 IYGQSCDGLDMITSSTYLPECNINDWIIYEYSGAYTFVSASGFNGF 905 >gi|50122838|ref|YP_052005.1| arginine decarboxylase [Pectobacterium atrosepticum SCRI1043] gi|49613364|emb|CAG76815.1| biosynthetic arginine decarboxylase [Pectobacterium atrosepticum SCRI1043] Length = 659 Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A G L+ +K + ++L G Sbjct: 88 PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M LGH N I L + ++ +S++ Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRLV 207 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQVLQLVEMLREAGKLESL 267 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351 >gi|227326184|ref|ZP_03830208.1| arginine decarboxylase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 660 Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A G L+ +K + ++L G Sbjct: 88 PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M LGH N I L + ++ +S++ Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRLV 207 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQVLQLVEMLREAGRLDSL 267 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351 >gi|332829146|gb|EGK01810.1| biosynthetic arginine decarboxylase [Dysgonomonas gadei ATCC BAA-286] Length = 630 Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 30/267 (11%), Positives = 71/267 (26%), Gaps = 31/267 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ K A ++ +K + + L + Sbjct: 59 PVLIRFPDILDNRIEKISTCFKLAAEEYEYKAQNHIIYPIKVNQMRPVVEELISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 G + S E+ ++ YKD + + + K + Sbjct: 119 IGLEAGSKPELHAVIAINTDSDSLIICNGYKDESYIELALLAQKMGKRIFIVVEKLNELP 178 Query: 112 QKLHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESE--------IK 156 L+I P++ S + S+ G + +E+ + Sbjct: 179 LIAKVAKRLKIRPNIGIRIKLASSGSGKWEESGGDGSKFGLNSSELLEALAYLEKNNMQE 238 Query: 157 NVNGLMFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 ++ + FH + + ++E++ +GGG+ Sbjct: 239 SLRLIHFHIGSQITKIRRIKTALREAAQFYVQLHTMGFKVEFVDIGGGLGVDYDGTRSSY 298 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTN 240 + ++Y +A N Sbjct: 299 NESSVNYSIQEYVNDSIATMVDAANKN 325 >gi|78222124|ref|YP_383871.1| arginine decarboxylase [Geobacter metallireducens GS-15] gi|123572446|sp|Q39X78|SPEA_GEOMG RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|78193379|gb|ABB31146.1| arginine decarboxylase [Geobacter metallireducens GS-15] Length = 635 Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 89/297 (29%), Gaps = 38/297 (12%) Query: 12 QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + K + + +K + + + ++ G S Sbjct: 67 DVLQGRIAAINRAFKYAIDENDYPSTYQTFYPIKVNQQRQVVEAIAKFGKRYNIGIEVGS 126 Query: 60 LYEVMLGHEKFGGETH-AYNVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQ 112 E+++G G YKD E + TI+ + +L K ++ Sbjct: 127 KPELVIGISFATGNGIPIICNGYKDKEYIETVLYATKIGYDITIVVEKMFELEKIIALSK 186 Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIES--------EIKNVNGLMF 163 K K L I +S ++ G + + I + + +V + F Sbjct: 187 KTGIKPKLGIRVKLSSKGTGKWATSGGEDAKFGLRMSEIIAAIGLLEQNELLDSVKLIHF 246 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + + L + + IE++ +GGG+ + + Sbjct: 247 HIGSQITKIDKIKSALIEGTRVYAEMRKLGVGIEYVDIGGGLGVDYDG-SKSSYFSSVNY 305 Query: 221 FSEKYSVQIYLEPGEAI------VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD 271 E+Y+ + + N + + ++ +++++ + +PD Sbjct: 306 SIEEYANDVIYQIKNICEDAGVECPNIISESGRATAAHYSVLVTNLLNTNTQNLMPD 362 >gi|224825180|ref|ZP_03698286.1| arginine decarboxylase [Lutiella nitroferrum 2002] gi|224602851|gb|EEG09028.1| arginine decarboxylase [Lutiella nitroferrum 2002] Length = 629 Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 88/294 (29%), Gaps = 47/294 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTL---NQYMD 53 P + L + + A + L +K + ++ + Sbjct: 60 PLLVRFPDILQDRVTRLCGAFDKAIADVGYGSQYTALYPIKVNQQEAVIKSIIATSSVSI 119 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEI------DAVLSNCDTIIFNTVSQLNKF 107 G + S E+M YKD + L + I+ +++ Sbjct: 120 GLEAGSKPELMAVLALAPKGCTITCNGYKDRDFVRLALIGQKLGHRVFIVIEKEVEVDLV 179 Query: 108 KDKAQKLHKKIGLRINPSVSY--SKFILADPNRPFSRLGEKCKDKIES--------EIKN 157 ++AQKL + + + +S S AD + G I+ Sbjct: 180 IEEAQKLGVRPLVGVRVRLSSLNSDNQWADTGGEKGKFGLSASQLIDVAGKMDAAGMADC 239 Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------- 207 V L FH + + + + + FG I+ + +GGG+ Sbjct: 240 VRLLHFHMGSQIANIADYRLGFREAIRYFGELRDLGLPIDHVDVGGGLGVDYDGTHSRNA 299 Query: 208 ---DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251 +Y ++++ + ++ +I E G A+ + L V D+ Sbjct: 300 SSINYDMEEYAHVIVSMLAEFCDENGLPHPRIMSESGRAMTAHHAVLIMNVTDV 353 >gi|157266135|gb|ABV26057.1| ODC [Paracoccidioides brasiliensis] gi|157266137|gb|ABV26058.1| ODC [Paracoccidioides brasiliensis] gi|157266139|gb|ABV26059.1| ODC [Paracoccidioides brasiliensis] gi|157266141|gb|ABV26060.1| ODC [Paracoccidioides brasiliensis] gi|157266143|gb|ABV26061.1| ODC [Paracoccidioides brasiliensis] gi|157266145|gb|ABV26062.1| ODC [Paracoccidioides brasiliensis] gi|157266149|gb|ABV26064.1| ODC [Paracoccidioides brasiliensis] gi|157266151|gb|ABV26065.1| ODC [Paracoccidioides brasiliensis] gi|157266153|gb|ABV26066.1| ODC [Paracoccidioides brasiliensis] gi|157266155|gb|ABV26067.1| ODC [Paracoccidioides brasiliensis] gi|157266157|gb|ABV26068.1| ODC [Paracoccidioides brasiliensis] gi|157266159|gb|ABV26069.1| ODC [Paracoccidioides brasiliensis] gi|157266161|gb|ABV26070.1| ODC [Paracoccidioides brasiliensis] gi|157266163|gb|ABV26071.1| ODC [Paracoccidioides brasiliensis] gi|157266165|gb|ABV26072.1| ODC [Paracoccidioides brasiliensis] gi|157266167|gb|ABV26073.1| ODC [Paracoccidioides brasiliensis] gi|157266169|gb|ABV26074.1| ODC [Paracoccidioides brasiliensis] gi|157266171|gb|ABV26075.1| ODC [Paracoccidioides brasiliensis] gi|157266173|gb|ABV26076.1| ODC [Paracoccidioides brasiliensis] gi|157266175|gb|ABV26077.1| ODC [Paracoccidioides brasiliensis] Length = 88 Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%) Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 P + G +C D+ E + +G+ + FE++ Y FNG Sbjct: 11 APIEYSIWGPTCDGIDLICERIALPGALDVGNWLYFENMGAYTKCSATRFNGF 63 >gi|5070268|gb|AAD39097.1|AF112367_1 S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium falciparum] Length = 1419 Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 58/219 (26%), Gaps = 8/219 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I T I+ QK+L V ++K + L +S+ Sbjct: 835 IDTSVVCINLQKILAQYVRFKKNL--PHVTPFYSVKSNNDEVVIKFLYGLNCNFDCASIG 892 Query: 62 EVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + + + K + + + K + Sbjct: 893 EISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHPKCSL 952 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 LRIN K ++ E+ + N+ G+ FH K+ F Sbjct: 953 ILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAKKHNLNIVGVSFHVGSNTKNLFDFCLA 1012 Query: 179 LKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214 +K F I+LGGG + K Sbjct: 1013 IKLCRDVFDMSSNMGFNFYIINLGGGYPEELEYDNAKKH 1051 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%) Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302 + V D + +I D + + N Y A V G+SC D+ Sbjct: 1301 YFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMNFNLYLANVFGQSCDGLDM 1360 Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + I D + +E Y + FNG Sbjct: 1361 INSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 1403 >gi|253690067|ref|YP_003019257.1| arginine decarboxylase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756645|gb|ACT14721.1| arginine decarboxylase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 660 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A G L+ +K + ++L G Sbjct: 88 PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M LGH N I L + ++ +S++ Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRLV 207 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQVLQLVEMLREAGKLDSL 267 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351 >gi|6002637|gb|AAF00073.1|AF094833_1 S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium falciparum] Length = 1419 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 58/219 (26%), Gaps = 8/219 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I T I+ QK+L V ++K + L +S+ Sbjct: 835 IDTSVVCINLQKILAQYVRFKKNL--PHVTPFYSVKSNNDEVVIKFLYGLNCNFDCASIG 892 Query: 62 EVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + + + K + + + K + Sbjct: 893 EISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHPKCSL 952 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 LRIN K ++ E+ + N+ G+ FH K+ F Sbjct: 953 ILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAKKHNLNIVGVSFHVGSNTKNLFDFCLA 1012 Query: 179 LKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214 +K F I+LGGG + K Sbjct: 1013 IKLCRDVFDMSSNMGFNFYIINLGGGYPEELEYDNAKKH 1051 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%) Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302 + V D + +I D + + N Y A V G+SC D+ Sbjct: 1301 YFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMNFNLYLANVFGQSCDGLDM 1360 Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + I D + +E Y + FNG Sbjct: 1361 INSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 1403 >gi|303238034|ref|ZP_07324577.1| arginine 2-monooxygenase [Prevotella disiens FB035-09AN] gi|302481824|gb|EFL44876.1| arginine 2-monooxygenase [Prevotella disiens FB035-09AN] Length = 630 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 28/271 (10%), Positives = 74/271 (27%), Gaps = 31/271 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM---- 52 P L L N ++ + A + ++ +K + D + + Sbjct: 59 PVLLRFPDILDNRIEMTSSCFEIAKKEYDYKGENFIIYPIKVNQMQPVVDEIISHGRKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ ++ YKD + I+ +++++ Sbjct: 119 LGLEAGSKPELHAVIAVQCQSDSPIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNEID 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIK 156 A+KL+ K + I ++ + + S+ G + +++ Sbjct: 179 IIAKAAKKLNVKPNIGIRIKLASTGSGKWSESGGDASKFGLTASELLQALDILDEKGLHD 238 Query: 157 NVNGLMFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + ++++ GGG+ Sbjct: 239 CLRLIHFHIGSQITKIRRIQTALTEAAQYYANLRKMGYNVDFVDCGGGLGIDYDGTRSSS 298 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244 + ++Y +A + Sbjct: 299 SESSINYTIQEYVNDCVCTFVDASNKHNIPH 329 >gi|283779635|ref|YP_003370390.1| arginine decarboxylase [Pirellula staleyi DSM 6068] gi|283438088|gb|ADB16530.1| arginine decarboxylase [Pirellula staleyi DSM 6068] Length = 686 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 79/284 (27%), Gaps = 43/284 (15%) Query: 11 KQKLLNNLDTALYIRKNAGVK---LL-LALKCFAAWGMFDTL----NQYMDGTTSSSLYE 62 K +L D + K + +K + + + QY G + S E Sbjct: 121 KDRLREIHDVFAQAIREHDYKGRYICVYPIKVNQQRHVVEQVVQYGKQYGFGLEAGSKPE 180 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 ++ T +KD E + I N + + KF + L + + Sbjct: 181 MLAVVAMTDAVTPIICNGFKDAEFIEMAMLAQKIGRNVIPVVEKFTELDLILKYAEKVGV 240 Query: 123 NPSVSYS-------KFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNC 167 P + S+ G + +++ L FH Sbjct: 241 RPQIGMRIKLAARGSGRWQSSGGWRSKFGLTVGEILQAMEELKKRDMLDCFKLLHFHLGS 300 Query: 168 ENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK----------DYPVKDF 214 + + + + + +E++ +GGG+ +Y ++++ Sbjct: 301 QITNIRHVKGAMTEAARAYADLVKKGAGLEYLDVGGGLGVDYDGSQTNFESSVNYTLQEY 360 Query: 215 CQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDI 251 + + I E G A+ L VL + Sbjct: 361 ANDVVHHLQTVLDESGVKHPHIISESGRAVAAYHACLIFGVLGV 404 >gi|124802820|ref|XP_001347606.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium falciparum 3D7] gi|23495189|gb|AAN35519.1|AE014834_16 S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium falciparum 3D7] Length = 1434 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 58/219 (26%), Gaps = 8/219 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I T I+ QK+L V ++K + L +S+ Sbjct: 847 IDTSVVCINLQKILAQYVRFKKNL--PHVTPFYSVKSNNDEVVIKFLYGLNCNFDCASIG 904 Query: 62 EVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + + + K + + + K + Sbjct: 905 EISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHPKCSL 964 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 LRIN K ++ E+ + N+ G+ FH K+ F Sbjct: 965 ILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAKKHNLNIVGVSFHVGSNTKNLFDFCLA 1024 Query: 179 LKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214 +K F I+LGGG + K Sbjct: 1025 IKLCRDVFDMSSNMGFNFYIINLGGGYPEELEYDNAKKH 1063 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%) Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302 + V D + +I D + + N Y A V G+SC D+ Sbjct: 1316 YFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMNFNLYLANVFGQSCDGLDM 1375 Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + I D + +E Y + FNG Sbjct: 1376 INSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 1418 >gi|223558062|gb|ACM91067.1| arginine decarboxylase [uncultured bacterium 34R1] Length = 606 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 29/277 (10%), Positives = 75/277 (27%), Gaps = 34/277 (12%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM- 52 I +P L L N ++ K A + ++ +K + + + + Sbjct: 26 ITSPILLRFPDILDNRIEKISSCFKKAAKEYEYKAENFVIYPIKVNQMRQVVEEIVGHGK 85 Query: 53 ---DGTTSSSLYEVMLGH----EKFGGETHAYNVAYKDCEI------DAVLSNCDTIIFN 99 G + S E+ + YKD + ++ Sbjct: 86 KFNIGLEAGSKPELHAVLAINMADISANSLIICNGYKDKGYVELALLAQKMGRRIFLVVE 145 Query: 100 TVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESE---- 154 ++L D A++L + + + +S S + + + G + + Sbjct: 146 KPNELKLIADVAKQLGIRPNVGVRIKLSSSGSGKWEESGGDRSKFGLNTSELFTALDFLK 205 Query: 155 ----IKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + + + FH + + + ++++ +GGG+ Sbjct: 206 ENKMMDCLKLIHFHIGSQVTKIRRIKNALREASQFYVQLTKMGFDLDFVDIGGGLGVDYD 265 Query: 208 DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244 + ++Y +A N Sbjct: 266 GSRNSASGHSMNYTIQEYVNDAVYTFVDACEKNAIKH 302 >gi|270263004|ref|ZP_06191274.1| biosynthetic arginine decarboxylase [Serratia odorifera 4Rx13] gi|270042692|gb|EFA15786.1| biosynthetic arginine decarboxylase [Serratia odorifera 4Rx13] Length = 658 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A G L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLVNSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I L + ++ +S++N Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEINMV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQVLKLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEH 350 >gi|87123488|ref|ZP_01079339.1| Arginine decarboxylase [Synechococcus sp. RS9917] gi|86169208|gb|EAQ70464.1| Arginine decarboxylase [Synechococcus sp. RS9917] Length = 650 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 31/275 (11%), Positives = 73/275 (26%), Gaps = 32/275 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + L + L+ + A + A +KC + + L Sbjct: 71 PLLIRFDDILEDRLERLHGAFERAITRYGYAGRYQGVFPVKCNQQRHVVEELVSCGKRWH 130 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ + YKD + + ++ Sbjct: 131 FGLEAGSKAELLIALSLIDDPDALLICNGYKDQRYIETAILARRLGRRPVVVIEQADEVQ 190 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156 + ++ L + I +S ++ G + + + ++ Sbjct: 191 RIIAASEALGAAPLIGIRARLSSRSTGRWGSSVGEKAKFGLPVPEILATVEALREANLLE 250 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + L FH + L+ I E + ++ +GGG+ Sbjct: 251 ELRLLHFHVGSQINDIAVVKDALQEASRIYVELHALGAPMGYMDVGGGLGIDYDG-SRTA 309 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 + Y+ + E + + T V Sbjct: 310 TAASTNYSLQNYANDVVATVQEGCAPHGVAVPTLV 344 >gi|71901303|ref|ZP_00683400.1| Orn/DAP/Arg decarboxylase 2 [Xylella fastidiosa Ann-1] gi|71728923|gb|EAO31057.1| Orn/DAP/Arg decarboxylase 2 [Xylella fastidiosa Ann-1] Length = 444 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 99/364 (27%), Gaps = 54/364 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53 P L L + L A G + +K G+ L + Sbjct: 59 PLLLRFPDILRHRLGKLQAAFVQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E+M YKD E + I+ S+L Sbjct: 119 GLEAGSKPELMAVLALSRQGGLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRMV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A+ L GL + ++ + + G + ++ + Sbjct: 179 LEEAKTLGVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADCL 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215 N + FH + + + ++ + F +I + +GGG+ + + C Sbjct: 239 NVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSDC 298 Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E Y +I E G A+ + L V ++ + Sbjct: 299 SINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEGR 358 Query: 259 ----VIVDSSVEAHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 + +V H+ + I G LA G+ + Sbjct: 359 VPGLCDDEPAVVRHMREIYGELDARPAIELFYEAQHFHAEG---LAAYTLGQIDLVHRAR 415 Query: 314 IGDR 317 I D Sbjct: 416 IDDL 419 >gi|212550467|ref|YP_002308784.1| arginine decarboxylase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548705|dbj|BAG83373.1| arginine decarboxylase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 630 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 83/313 (26%), Gaps = 49/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ K + + ++ +K + + + + Sbjct: 59 PLLVRFPDILDNRIEKISGCFKTSAKEYNYTAQNFIIYPIKVNQMRQVVEEIVNHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK--FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLN 105 G + S E+ N + I + I+ +++L Sbjct: 119 IGLEAGSKPELHAVLAINTCSDSLIVCNGYKDENYIRLALLAQKMGKNIFIVVEKLNELK 178 Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIES--------EIK 156 + A+K+ + I S + S+ G + +E+ Sbjct: 179 LIAELAKKVKIYPNIGIRIKLASSGSGKWEESGGDGSKFGLSSSELLEAIDFMNKNKLKD 238 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + + + +IE++ +GGG+ Sbjct: 239 CLKLIHFHIGSQVTKIRRIKNALREASQFYVQLRSIGYEIEFVDIGGGLGVDYDGTRNDR 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G ++ + + L VL+ + Sbjct: 299 SESSMNYSIQEYVNDSISTLVDVCMKNSIPQPNIITECGRSLTAHHSVLIFQVLETAILP 358 Query: 256 KNLVIVDSSVEAH 268 + H Sbjct: 359 EWKEDEKLPKNTH 371 >gi|110637980|ref|YP_678187.1| arginine decarboxylase, biosynthetic [Cytophaga hutchinsonii ATCC 33406] gi|110280661|gb|ABG58847.1| arginine decarboxylase, biosynthetic [Cytophaga hutchinsonii ATCC 33406] Length = 430 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 98/359 (27%), Gaps = 44/359 (12%) Query: 33 LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHA---YNVAYKDCEIDAV 89 K + + + +SS Y++ + F + + Sbjct: 46 CYCTKSSHFSFVLNEALKNDIHIETSSAYDIPIVRILFENNKITKATNVICNGYKRPEYT 105 Query: 90 LSNCDTIIFNTVSQL-----NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLG 144 CD I ++ + + L I + +R R Sbjct: 106 DYICDLINEGFNCTPILDNLDEITAYEKGIETSCNLGIRLATDEEPKFEFYTSRLGFRYN 165 Query: 145 EKC----KDKIESEIKNVNGLMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWIS 197 + + + + L F N K + + ++ ++ I Sbjct: 166 DVVQFYKEKIEPNPKFKLKMLHFFINTGIKDTTYYWSELSRFVHMYCTMKKINPDMDSID 225 Query: 198 LGGGIHFT---DKDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTT 247 +GGG +Y K ++ + +K I+ E G V + + Sbjct: 226 IGGGWPIKTSVHFEYDYKYMADQIVKTIKKVCDEEGVPTPNIFTEFGSFTVGESGAAVYS 285 Query: 248 VLD--ISENIKNLVIVDSSVEAHVPDYLL----YQESATIYPNTGPYTAMVCGRSCLAGD 301 VL + + + ++DSS +PD Y A + + G +C + D Sbjct: 286 VLGSKLQNDKEEWYMIDSSFITTLPDVWGLSQKYLLLAVNGWDKPYKKVKLGGITCDSMD 345 Query: 302 IFGEF-----HFEKPVKIGD--RISFEDVAGYNINRKNWFNGI-----NMPTIAVKNVD 348 + F + + I F Y + + GI P + + D Sbjct: 346 YYNSEAHQNLVFMPELDEKEPTYIGFFHTGAYQESLG-GYGGIQHCLVPAPKHILIDKD 403 >gi|300934298|ref|ZP_07149554.1| decarboxylase [Corynebacterium resistens DSM 45100] Length = 1045 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 27/211 (12%), Positives = 63/211 (29%), Gaps = 10/211 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +P ++ L N + + + GV ++ A K D G +S Sbjct: 549 DSPVNVLAPHVLSRNAEDLVRAGQANGVDVRVFYARKANKGLSFVDAALAAGHGVDVASE 608 Query: 61 YEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ L + D + ++ I ++V++L++ + Sbjct: 609 RELQQVLSRGAQPDQVILSAAVKPDRLLQLAVNAGVYISVDSVAELHRIEAIVGDTSGSA 668 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176 + L P R + ++ V G+ H + +++ + Sbjct: 669 RVVPRI---APNPNLLPPTRFGELVETWEREVQRDFTPGVEVHGVHLHLHGYSEADRRIA 725 Query: 177 AMLKNIEKEFGH-FITQIEWISLGGGIHFTD 206 + + +I LGGG+ + Sbjct: 726 LADAIAIVDAATLAGHPVSFIDLGGGVPMSY 756 Score = 37.0 bits (84), Expect = 4.6, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Query: 290 AMVCGRSCLAGDIFGEF--HFEKPVKIGDRISFEDVAGYNI 328 A + G C+ ++ HF + V+ GD I+ + AGY + Sbjct: 927 AFLVGAYCIEDEVIIRREMHFPEGVESGDIIAIPNTAGYFM 967 >gi|188534945|ref|YP_001908742.1| arginine decarboxylase [Erwinia tasmaniensis Et1/99] gi|188029987|emb|CAO97871.1| Biosynthetic arginine decarboxylase [Erwinia tasmaniensis Et1/99] Length = 658 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 77/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHKRVIESLINSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVKLV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESE--------IKNV 158 ++A++L+ L I ++ + + G ++ ++++ Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRMESL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ + G A Sbjct: 327 S-VNYGLNEYANNVIWAIGAAC 347 >gi|156742443|ref|YP_001432572.1| Orn/DAP/Arg decarboxylase 2 [Roseiflexus castenholzii DSM 13941] gi|156233771|gb|ABU58554.1| Orn/DAP/Arg decarboxylase 2 [Roseiflexus castenholzii DSM 13941] Length = 528 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 39/358 (10%), Positives = 88/358 (24%), Gaps = 49/358 (13%) Query: 16 NNLDTALYIRK----NAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH--- 67 + + AG + A K A + T +S+ +V + H Sbjct: 65 ERMREWAEAARARSGYAGDFIYAYATKANFAEEVVRTAISSGAHYETSAAADVAIAHYLW 124 Query: 68 --EKFGGETHAYNVAYKDCEIDAVLSNCDT----IIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + KD A + + + L++ + + + L Sbjct: 125 QQGVLPSDRFIFCNGSKDHAYIAAIVTLRHAGFARVVPVIDDLDELETLLAMCREPLLLG 184 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLCF 175 + + + + P R G + + + + + + Sbjct: 185 VRERHTPADVDVNHPGGE--RFGLTPDEIARVVERLHHTPHRLVMYHAMVGSQIEDPERW 242 Query: 176 SAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPV-----------KDFCQRLKEF 221 + L + + + GGG+ + + + Sbjct: 243 NERLARSAEAYARLRQRAPSLWLFNFGGGMPTSAYSLDFRFDYAGFLDRLMTMLAAVCDT 302 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV---PDYLLYQES 278 + E G V + V + + + PD L+ Sbjct: 303 HHIPQPTLVGEFGRYTVASHNVFIMEVGRVKCGQGAAPDWVLLNGSLMVALPDSLIVPGQ 362 Query: 279 ATIY-----PNTGPYTAMVCGR-SCLAGDIFGEFHFEKPVKI----GDRISFEDVAGY 326 I + + GR +C + D F + G +I+F V Y Sbjct: 363 EFIILPLDGWDQPVRPVRLAGRLTCDSDDFFPRPGAPPLLLPEPYPGQKIAFFGVGAY 420 >gi|325268245|ref|ZP_08134878.1| arginine 2-monooxygenase [Prevotella multiformis DSM 16608] gi|324989387|gb|EGC21337.1| arginine 2-monooxygenase [Prevotella multiformis DSM 16608] Length = 671 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 29/256 (11%), Positives = 75/256 (29%), Gaps = 28/256 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ RK G K ++ +K + + + + G + S Sbjct: 108 ILD-NRIEKTSSCFEKARKEYGFKAENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 166 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++++ A+ Sbjct: 167 KPELHAVIAVQCQSDSLIVCNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIDLIARAAK 226 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163 KL+ K L I ++ S + S+ G + +++ ++ + F Sbjct: 227 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALETLDGKGLHDCLHLIHF 286 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + ++++ GGG+ + + Sbjct: 287 HIGSQITKIRRIQTALNEAAQYYVNLRRMGYGVDFVDCGGGLGVDYDGTRSSNSESSVNY 346 Query: 221 FSEKYSVQIYLEPGEA 236 ++Y +A Sbjct: 347 SIQEYVNDCVYTFVDA 362 >gi|292487093|ref|YP_003529963.1| arginine decarboxylase [Erwinia amylovora CFBP1430] gi|292900523|ref|YP_003539892.1| biosynthetic arginine decarboxylase [Erwinia amylovora ATCC 49946] gi|291200371|emb|CBJ47499.1| biosynthetic arginine decarboxylase [Erwinia amylovora ATCC 49946] gi|291552510|emb|CBA19555.1| arginine decarboxylase [Erwinia amylovora CFBP1430] gi|312171197|emb|CBX79456.1| arginine decarboxylase [Erwinia amylovora ATCC BAA-2158] Length = 658 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 77/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARGSYGYNGDYFLVYPIKVNQHKRVIESLINSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVKLV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESE--------IKNV 158 ++A++L+ L I ++ + + G ++ ++++ Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLQLVDIMRDAGRMESL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ + G A Sbjct: 327 S-VNYGLNEYANNVIWAIGAAC 347 >gi|242094536|ref|XP_002437758.1| hypothetical protein SORBIDRAFT_10g002070 [Sorghum bicolor] gi|241915981|gb|EER89125.1| hypothetical protein SORBIDRAFT_10g002070 [Sorghum bicolor] Length = 701 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 72/260 (27%), Gaps = 34/260 (13%) Query: 12 QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59 L + ++T + + + +KC + + + ++ G + S Sbjct: 116 DVLRHRVETLNAAFGYAVRSTGYGSRYQGVYPVKCNQDRYVVEDIVEFGAPFGFGLEAGS 175 Query: 60 LYEVMLGH----EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E++L + + YKD ++ ++ NTV L + ++ + Sbjct: 176 KPELLLAMSCLAARGNPDALLICNGYKDDGYVSLALMARSMGLNTVIVLEQEEELDIVVE 235 Query: 116 KKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNG 160 L + P V + + G + + + + Sbjct: 236 ASRRLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNAAQILSVVTKLKAIAMLDCLQL 295 Query: 161 LMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 L FH + + I E + I +GGG+ Sbjct: 296 LHFHIGSQIPTTALLSDGVGEAAQIYCELARLGADMRVIDVGGGLGIDYDGTHSAQTDMS 355 Query: 218 LKEFSEKYSVQIYLEPGEAI 237 + E+Y+ + G Sbjct: 356 VAYSLEEYATAVVAAVGRVC 375 >gi|313205307|ref|YP_004043964.1| orn/dap/arg decarboxylase 2 [Paludibacter propionicigenes WB4] gi|312444623|gb|ADQ80979.1| Orn/DAP/Arg decarboxylase 2 [Paludibacter propionicigenes WB4] Length = 463 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 63/402 (15%), Positives = 124/402 (30%), Gaps = 57/402 (14%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMDG 54 TP + K+ N+ A + A K+ K + + + ++ Sbjct: 42 GTPLRISYLPKIAQNIQKARRMFNVAMAKVDYNGDYNYCYCTKSSHFSFVMEEVLKHGVH 101 Query: 55 TTSSS-----LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL--NKF 107 +SS + E + + +T +K + + N + F V + NKF Sbjct: 102 LETSSAFDINIMESLYEQDLLKTDTFVICNGFKRPQYVENIQNLMRLGFTNVIPILDNKF 161 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--------N 159 + I + ++ + D SRLG + D I K++ Sbjct: 162 ELDLFLKDFDIKFNVGIRIAAEEEPKFDF--YTSRLGIRYNDIIPYYTKHIANNPQVELK 219 Query: 160 GLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH---FTDKDYPVKD 213 L F N K + L E Q++ +++GGG D Y + Sbjct: 220 MLHFFINTGVKDTAYYWNELNKAVNLYCELKKKCPQLDSLNIGGGFPIQTHLDMVYDYEY 279 Query: 214 FCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSS 264 + + + I+ E G V + + ++++ + ++DSS Sbjct: 280 MAEEIVAQIKTICTQNGVPEPHIFTEFGSYTVGESGAMLYSIVNQKKQNDRELWNMIDSS 339 Query: 265 VEAHVPDYLL----YQESATIYPNTGPYTAMVCGRSCLAGDIF-----GEFHFEKPVKIG 315 +PD Y A ++ + G +C + D + F + Sbjct: 340 FMTTLPDTWAINQRYVFLAINNWDSEYERVNLGGLTCDSEDFYNAEVHSNAVFLPKMHED 399 Query: 316 --DRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350 I F Y + + F G I P + + + D Sbjct: 400 REQYIGFFHTGAYQESL-SGFGGIQHCLIPAPKLVIIDQDED 440 >gi|194476838|ref|YP_002049017.1| arginine decarboxylase [Paulinella chromatophora] gi|171191845|gb|ACB42807.1| arginine decarboxylase [Paulinella chromatophora] Length = 640 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 81/295 (27%), Gaps = 48/295 (16%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM---- 52 P + L + L+ K +KC + + L + Sbjct: 67 PLLIHFDDILEHRLNQLNNSFRKAIKKYDYAGCYQGVFPVKCNQQRHLLEHLVESGRSWN 126 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLN 105 G S E+++ + YKD I+ +L Sbjct: 127 FGLEVGSKAELLIALSLLDNPKALLICNGYKDQRYIETAILARRLGRQPVIVIEQADELY 186 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIES--------EIK 156 + ++ L + I +S ++ G + + + Sbjct: 187 RIVAASRILGASPLIGIRAKLSTRSTGRWGSSVGEMAKFGLAIPEIKTAVEKLREANLLN 246 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK------ 207 ++ L FH + L+ I + + ++ +GGG+ Sbjct: 247 SLCLLHFHIGSQISDIAVLKDALQEAGQIYVQLVQLGAPMGYLDVGGGLGIDYDGSRTAT 306 Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251 +Y ++++ + ++ I E G AI ++ + L VL + Sbjct: 307 AASTNYSLQNYANDVVATVKECCLSHSIKLPTIITESGRAIASHCSVLIFNVLGV 361 >gi|157266147|gb|ABV26063.1| ODC [Paracoccidioides brasiliensis] Length = 88 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%) Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 P + G +C D+ E + +G+ + FE++ Y FNG Sbjct: 11 APIEYSIWGPTCDGIDLICERIALPGALDVGNWLYFENMGAYTKCSATRFNGF 63 >gi|42521980|ref|NP_967360.1| arginine decarboxylase [Bdellovibrio bacteriovorus HD100] gi|39574510|emb|CAE78014.1| arginine decarboxylase [Bdellovibrio bacteriovorus HD100] Length = 662 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 94/319 (29%), Gaps = 49/319 (15%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYM---- 52 P + + + + ++ + G K + +K + L +Y Sbjct: 88 PIMIRFPEIIKSRVELLNGCFQKAFADHGYKGQYRGVYPIKVNQQRHLVQELVKYGKDYS 147 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105 G + S E+++ + +KD E I+ + +L Sbjct: 148 MGLEAGSKPELLVVLALMNTPDALIICNGFKDWEYIETAILSQKLGRNTIIVVDRKEELK 207 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEIK-------- 156 D A+K + + + ++ D + S+ G + +E Sbjct: 208 MIVDVAKKFNARPKIGFRAKLNTQGAGKWVDSSGARSKFGLTSTEIVEGVEFLKNEGMLD 267 Query: 157 NVNGLMFHNNC---ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206 + L +H + +S E +++I +GGG+ Sbjct: 268 CLELLHYHIGSQVPQIQSIKSSLKEGARFYTELYKMGAGLKYIDVGGGLGVDYDGSGHSD 327 Query: 207 ------KDYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 + D L+ ++ I E G +V + + L V+ +++ ++ Sbjct: 328 SSVNYSEQEYANDIVSVLQTLCDEKGIPHPNIVTESGRFLVAHHSVLVFNVMGVNDLHRH 387 Query: 258 LVIVDSSVEAH--VPDYLL 274 ++ H + D Sbjct: 388 EPPRPATKTDHSIMQDMQY 406 >gi|310766494|gb|ADP11444.1| arginine decarboxylase [Erwinia sp. Ejp617] Length = 658 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 77/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHKRVIESLINSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVKLV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESE--------IKNV 158 ++A++L+ L I ++ + + G ++ ++++ Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMRDAGRMESL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ + G A Sbjct: 327 S-VNYGLNEYANNVIWAIGAAC 347 >gi|298488969|ref|ZP_07006992.1| Biosynthetic arginine decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156467|gb|EFH97564.1| Biosynthetic arginine decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 637 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKSGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A+ S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + K E +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|56377973|dbj|BAD74164.1| ornithine decarboxylase [Malus x domestica] Length = 173 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 22/174 (12%), Positives = 46/174 (26%), Gaps = 8/174 (4%) Query: 34 LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSN 92 A+KC L +S E+ Y K + Sbjct: 1 YAVKCNPEPAFIAALATLGASFDCASKVEIEAILSHGVSPSRIVYANPCKGENHLRHAAG 60 Query: 93 CD--TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK 150 F+++ +LNK K K + + + S + + + Sbjct: 61 VGVNLATFDSMDELNKIKRCHPKCSLLLRIAVPNDTSSWRSFGTKFGALSEEVAPLLRHA 120 Query: 151 IESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGG 200 V G+ FH + + + + F + ++ + +GG Sbjct: 121 -HKLGLRVVGVSFHVGSKASESQVYRGAIAAAKAAFDVADELQLPKMHVLDIGG 173 >gi|325859676|ref|ZP_08172806.1| arginine 2-monooxygenase [Prevotella denticola CRIS 18C-A] gi|325482602|gb|EGC85605.1| arginine 2-monooxygenase [Prevotella denticola CRIS 18C-A] Length = 630 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 29/256 (11%), Positives = 75/256 (29%), Gaps = 28/256 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ RK G K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTSSCFEKARKEYGFKAENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++++ A+ Sbjct: 126 KPELHAVIAVQCQSDSLIVCNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIDLIARAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163 KL+ K L I ++ S + S+ G + +++ ++ + F Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALETLDEKGLHDCLHLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + ++++ GGG+ + + Sbjct: 246 HIGSQITKIRRIQTALNEAAQYYVNLRRMGYGVDFVDCGGGLGVDYDGTRSSNSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEA 236 ++Y +A Sbjct: 306 SIQEYVNDCVYTFVDA 321 >gi|22127189|ref|NP_670612.1| arginine decarboxylase [Yersinia pestis KIM 10] gi|45443251|ref|NP_994790.1| arginine decarboxylase [Yersinia pestis biovar Microtus str. 91001] gi|51597512|ref|YP_071703.1| arginine decarboxylase [Yersinia pseudotuberculosis IP 32953] gi|108806333|ref|YP_650249.1| arginine decarboxylase [Yersinia pestis Antiqua] gi|108813286|ref|YP_649053.1| arginine decarboxylase [Yersinia pestis Nepal516] gi|145597893|ref|YP_001161969.1| arginine decarboxylase [Yersinia pestis Pestoides F] gi|149367061|ref|ZP_01889094.1| biosynthetic arginine decarboxylase [Yersinia pestis CA88-4125] gi|153949410|ref|YP_001399827.1| arginine decarboxylase [Yersinia pseudotuberculosis IP 31758] gi|162420874|ref|YP_001607692.1| arginine decarboxylase [Yersinia pestis Angola] gi|165924887|ref|ZP_02220719.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165937215|ref|ZP_02225779.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Orientalis str. IP275] gi|166010228|ref|ZP_02231126.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166212645|ref|ZP_02238680.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua str. B42003004] gi|167399921|ref|ZP_02305439.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421979|ref|ZP_02313732.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426717|ref|ZP_02318470.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470378|ref|ZP_02335082.1| biosynthetic arginine decarboxylase [Yersinia pestis FV-1] gi|170023094|ref|YP_001719599.1| arginine decarboxylase [Yersinia pseudotuberculosis YPIII] gi|186896633|ref|YP_001873745.1| arginine decarboxylase [Yersinia pseudotuberculosis PB1/+] gi|218928102|ref|YP_002345977.1| arginine decarboxylase [Yersinia pestis CO92] gi|229837618|ref|ZP_04457780.1| arginine decarboxylase [Yersinia pestis Pestoides A] gi|229840845|ref|ZP_04461004.1| arginine decarboxylase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842595|ref|ZP_04462750.1| arginine decarboxylase [Yersinia pestis biovar Orientalis str. India 195] gi|229903746|ref|ZP_04518859.1| arginine decarboxylase [Yersinia pestis Nepal516] gi|270487526|ref|ZP_06204600.1| arginine 2-monooxygenase [Yersinia pestis KIM D27] gi|294502907|ref|YP_003566969.1| arginine decarboxylase [Yersinia pestis Z176003] gi|46397734|sp|Q8ZHG8|SPEA_YERPE RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|21960254|gb|AAM86863.1|AE013932_6 biosynthetic arginine decarboxylase [Yersinia pestis KIM 10] gi|45438119|gb|AAS63667.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Microtus str. 91001] gi|51590794|emb|CAH22440.1| Biosynthetic arginine decarboxylase [Yersinia pseudotuberculosis IP 32953] gi|108776934|gb|ABG19453.1| arginine decarboxylase [Yersinia pestis Nepal516] gi|108778246|gb|ABG12304.1| arginine decarboxylase [Yersinia pestis Antiqua] gi|115346713|emb|CAL19596.1| biosynthetic arginine decarboxylase [Yersinia pestis CO92] gi|145209589|gb|ABP38996.1| arginine decarboxylase [Yersinia pestis Pestoides F] gi|149290675|gb|EDM40751.1| biosynthetic arginine decarboxylase [Yersinia pestis CA88-4125] gi|152960905|gb|ABS48366.1| biosynthetic arginine decarboxylase [Yersinia pseudotuberculosis IP 31758] gi|162353689|gb|ABX87637.1| biosynthetic arginine decarboxylase [Yersinia pestis Angola] gi|165914689|gb|EDR33302.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Orientalis str. IP275] gi|165923087|gb|EDR40238.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990714|gb|EDR43015.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205937|gb|EDR50417.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960116|gb|EDR56137.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050629|gb|EDR62037.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054320|gb|EDR64139.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749628|gb|ACA67146.1| arginine decarboxylase [Yersinia pseudotuberculosis YPIII] gi|186699659|gb|ACC90288.1| arginine decarboxylase [Yersinia pseudotuberculosis PB1/+] gi|229679516|gb|EEO75619.1| arginine decarboxylase [Yersinia pestis Nepal516] gi|229690905|gb|EEO82959.1| arginine decarboxylase [Yersinia pestis biovar Orientalis str. India 195] gi|229697211|gb|EEO87258.1| arginine decarboxylase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704306|gb|EEO91317.1| arginine decarboxylase [Yersinia pestis Pestoides A] gi|262360942|gb|ACY57663.1| arginine decarboxylase [Yersinia pestis D106004] gi|262364882|gb|ACY61439.1| arginine decarboxylase [Yersinia pestis D182038] gi|270336030|gb|EFA46807.1| arginine 2-monooxygenase [Yersinia pestis KIM D27] gi|294353366|gb|ADE63707.1| arginine decarboxylase [Yersinia pestis Z176003] gi|320013991|gb|ADV97562.1| arginine decarboxylase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 659 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A G L+ +K + ++L G Sbjct: 88 PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLVNSGEPLG 147 Query: 55 TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E +L H N I L + ++ +S++ Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLREANSLESL 267 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351 >gi|302185179|ref|ZP_07261852.1| arginine decarboxylase [Pseudomonas syringae pv. syringae 642] Length = 637 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSKYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A+ S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + K E +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|66047608|ref|YP_237449.1| arginine decarboxylase [Pseudomonas syringae pv. syringae B728a] gi|63258315|gb|AAY39411.1| Arginine decarboxylase [Pseudomonas syringae pv. syringae B728a] gi|330969417|gb|EGH69483.1| arginine decarboxylase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 637 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSKYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A+ S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + K E +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|90083064|dbj|BAE90614.1| unnamed protein product [Macaca fascicularis] Length = 206 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 26/70 (37%) Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 119 HKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFNDF 178 Query: 338 NMPTIAVKNV 347 P I Sbjct: 179 QRPAIYYMMS 188 >gi|167916301|ref|ZP_02503392.1| hypothetical protein Bpse112_37852 [Burkholderia pseudomallei 112] Length = 159 Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 11/129 (8%) Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQESATI 281 +I LE G +V+ +V+D + +V H + + + Sbjct: 31 EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNLGQLIRRNYPVV 90 Query: 282 YPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 N V G C DI + GD + Y + F Sbjct: 91 VGNRVVGDERERVNVVGPLCTPLDIIAHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 150 Query: 337 INMPTIAVK 345 + Sbjct: 151 QPAAREVIV 159 >gi|168003930|ref|XP_001754665.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694286|gb|EDQ80635.1| predicted protein [Physcomitrella patens subsp. patens] Length = 668 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 75/270 (27%), Gaps = 33/270 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + + N +DT + + +KC + + + + Sbjct: 82 PLIIRFPDIVKNRMDTLQSAFDRGIARHRYSGRFQGVFPVKCNPDRYLIEEIVSHGRYIN 141 Query: 53 DGTTSSSLYEVMLGHEKF---GGETHAYNVAYKDCEIDAV------LSNCDTIIFNTVSQ 103 G + S E++L + YKD E + + I+ + + Sbjct: 142 FGLEAGSKPELLLVMAAMCRASNDAFLICNGYKDVEYVEMALVARTMGLNTMIVLEQLEE 201 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIE--------SE 154 L+ + +L + + + +S + + + G + ++ Sbjct: 202 LDIVIKVSNQLQIRPVIGVRAKLSTKHAGHWGETSGEKGKFGLSTSEIVQVVKRLRKVDM 261 Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV 211 + L FH + S + F + I +GGG+ Sbjct: 262 SDCLQLLHFHIGSQIPSLSIVREGVSEAAHIFCELALMGANMNVIDIGGGLGVDYDGTHS 321 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 + E+Y+ + +A V Sbjct: 322 SSSDMSIGYNMEEYAETVVEAIKDATVQKN 351 >gi|108759559|ref|YP_630959.1| arginine decarboxylase [Myxococcus xanthus DK 1622] gi|108463439|gb|ABF88624.1| arginine decarboxylase [Myxococcus xanthus DK 1622] Length = 696 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 34/264 (12%), Positives = 78/264 (29%), Gaps = 32/264 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + + + A G + + +K + +TL + Sbjct: 86 PLLIRFTDVLRHRVVHLNEAFRKAMSDQGFKGGYRGVYPIKVNQHRYVVETLIEAGKGYN 145 Query: 53 DGTTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSNC------DTIIFNTVSQLN 105 G + S E++ E YKD E ++ S+L Sbjct: 146 YGLEAGSKPELLAVMALLENENALVICNGYKDEEYIETALFYSRLGRNVILVVEKPSELP 205 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIK 156 + A++ L I +S + + + G + + + Sbjct: 206 LIAEVARRTGIAPRLGIRVKLSTRGAGKWEASGGDRSKFGLTSSELMNCIGFMKDAGLLN 265 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD 213 + L FH + + L+ + + ++++ +GGG+ + Sbjct: 266 SFELLHFHLGSQISNIRNVKNALREVGCFYVEVARQGAPLKYLDVGGGLGVDYDG-SQTN 324 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAI 237 F + +E+Y+ + EA Sbjct: 325 FASSMNYTTEEYANDVVFGVMEAC 348 >gi|104783785|ref|YP_610283.1| arginine decarboxylase [Pseudomonas entomophila L48] gi|95112772|emb|CAK17500.1| arginine decarboxylase, PLP-binding, biosynthetic [Pseudomonas entomophila L48] Length = 637 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 86/301 (28%), Gaps = 46/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 G + S E++ YKD E + + N + K + A Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189 Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 + + L++ P V S + AD S+ G I + + Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLISVVQRFRDAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 +Y + D+ + +++ I+ E G ++ + L V D+ + + Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVESHNDEM 369 Query: 259 V 259 Sbjct: 370 P 370 >gi|330953042|gb|EGH53302.1| arginine decarboxylase [Pseudomonas syringae Cit 7] Length = 637 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSKYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A+ S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRMAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + K E +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|302804314|ref|XP_002983909.1| hypothetical protein SELMODRAFT_41652 [Selaginella moellendorffii] gi|300148261|gb|EFJ14921.1| hypothetical protein SELMODRAFT_41652 [Selaginella moellendorffii] Length = 613 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 29/268 (10%), Positives = 69/268 (25%), Gaps = 33/268 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + + L L + A + + +KC + + + Sbjct: 62 PLIIRFPELLGARLRELQSAFQGAIHALGYNNRFQGVFPVKCNPDKLLVEEIVAAGKPFA 121 Query: 53 DGTTSSSLYEVML---GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E++L K + YKD E + ++ + + L + + Sbjct: 122 FGLEAGSKPELLLTMSAMCKAHPDAFLICNGYKDAEYVQLALLARSLGMDCIIVLEQLDE 181 Query: 110 KAQKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEIK------ 156 + L I P+ + + + G + +E + Sbjct: 182 VDLVIEMSQRLGIEPAIGVRSKLHTKHGGHWGETCGEGGKFGLSAPEIVEVARRLRRQGM 241 Query: 157 --NVNGLMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 + + FH + + E + + +GGG+ Sbjct: 242 LDCLELVHFHVGSQIPCLSVVKDSVSEAAFLYCELALMGAGMRILDIGGGLGIDYDGSAS 301 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + +Y+ + A Sbjct: 302 ASSDMSVGYTVPEYASAVVAAIDAACTM 329 >gi|238754597|ref|ZP_04615951.1| Biosynthetic arginine decarboxylase [Yersinia ruckeri ATCC 29473] gi|238707228|gb|EEP99591.1| Biosynthetic arginine decarboxylase [Yersinia ruckeri ATCC 29473] Length = 638 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 67 PALFCFPQILQHRLRSINAAFKRAREEFGYQGNYFLVYPIKVNQHRRVIESLVNSGEPLG 126 Query: 55 TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E +L H N I L + ++ +S++ Sbjct: 127 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALTGEKLGHKVYLVIEKMSEIKMV 186 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A +L L + ++ + + G ++ ++ ++ Sbjct: 187 LEEAARLDVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVEMLREADKLDSL 246 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 247 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 306 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 307 S-VNYGLNEYANNVIWGIGDACNEH 330 >gi|282897114|ref|ZP_06305116.1| Arginine decarboxylase [Raphidiopsis brookii D9] gi|281197766|gb|EFA72660.1| Arginine decarboxylase [Raphidiopsis brookii D9] Length = 587 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 86/295 (29%), Gaps = 48/295 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + L + ++ A + + +KC + + L ++ Sbjct: 16 PLLIRFSDILEDRIERLNSCFAKAIARYNYSGVYRGVFPVKCNQERHLIEDLVRFGTPHQ 75 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105 G + S E+M+ YKD E I+ + +++ Sbjct: 76 FGLEAGSKPELMIALALLDTPGALLVCNGYKDREYIETAMLAQKLGQTPIIVLEQIEEVD 135 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156 + +L K L + +S + + G + +E+ + Sbjct: 136 LAIAASDQLGIKPILGVRAKLSTQGMGRWGTSTGDRAKFGLTIPEIMEAVDRLRSANLLD 195 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206 + L FH + I E ++++ +GGG+ Sbjct: 196 CLQLLHFHIGSQISAINVIKDAIQEASRIYVELAMLGADMKFLDVGGGLGVDYDGSQTNF 255 Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251 K+Y ++++ + + + E G AI ++ + L VL Sbjct: 256 YASKNYNMQNYANDIVAELKDTCSESKIPVPTLISESGRAIASHQSVLIFDVLST 310 >gi|260599267|ref|YP_003211838.1| arginine decarboxylase [Cronobacter turicensis z3032] gi|260218444|emb|CBA33565.1| Biosynthetic arginine decarboxylase [Cronobacter turicensis z3032] Length = 654 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 90/361 (24%), Gaps = 44/361 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 83 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 142 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 143 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIKIV 202 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 203 LEEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEMLREADRLDSL 262 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E IE +GGG+ + + C Sbjct: 263 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIECFDVGGGLGVDYEGTRSQSDC 322 Query: 216 QRLKEFSEKYSVQIYLEPGEAI------VTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269 + +Y+ I G+A T + + + I+ + Sbjct: 323 S-VNYGLNEYANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYT 381 Query: 270 PDY--LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHF-EKPVKIGDRISFEDVAGY 326 G + + + IG Y Sbjct: 382 EPTAPSEDAPRPLQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIG-----YSSGSY 436 Query: 327 N 327 Sbjct: 437 T 437 >gi|3283904|gb|AAC25391.1| antizyme inhibitor [Homo sapiens] Length = 176 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 26/70 (37%) Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + +T+ + G SC D E + +GD + F+++ + + + FN Sbjct: 67 HKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFNDF 126 Query: 338 NMPTIAVKNV 347 P I Sbjct: 127 QRPAIYYMMS 136 >gi|318062629|ref|ZP_07981350.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actG] gi|318079938|ref|ZP_07987270.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actF] Length = 448 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 42/367 (11%), Positives = 91/367 (24%), Gaps = 32/367 (8%) Query: 8 LIDKQKLLNNLDTALYIRK------NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 L+D + V+ A++ + L + G +S Sbjct: 42 LLDVTGIRRTARALQSAFAPLVAEGGPAVRHTFAVRATPLVPVLRLLYEDRIGAEVASAA 101 Query: 62 EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ L G T + E+ L + + + +L + + Sbjct: 102 ELALARAAGVQPGHTVLDSPTKTVAELREALGSGVLVDVDDAQELERLDALRGEAAATST 161 Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN-------KS 171 + + + ++ + L H+ +N + Sbjct: 162 FGVRVDPHAGAERRAVFGVALGHEGAREWILSAFADRPWLTRLHAHSEVKNAGGVAPERL 221 Query: 172 FLCFSAMLKNIEKEFGHFITQ---------IEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 + + E+ + G + LKE Sbjct: 222 AEGVRKVYELAEEINAAAGRRQVDALALGGGLAAGAREGDTGDGDGADFAGYAALLKETV 281 Query: 223 EKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE---AHVPDYLLYQ 276 + G +++ L V + + V + H L Sbjct: 282 PGLFDGRYALVTGFGRSLLAGHGFLLARVEYVRAMGGRRLAVTHAGTRMAGHACGRRLAA 341 Query: 277 ESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335 A P GP A + G + G++ ++ GD ++ D Y R ++ Sbjct: 342 YDAQGRPKGGPALAQDLAGPAQFDGELLASGVELPELEQGDWLAVLDTGAYGFARHQAYD 401 Query: 336 GINMPTI 342 + P I Sbjct: 402 SLTRPGI 408 >gi|282901548|ref|ZP_06309470.1| Arginine decarboxylase [Cylindrospermopsis raciborskii CS-505] gi|281193591|gb|EFA68566.1| Arginine decarboxylase [Cylindrospermopsis raciborskii CS-505] Length = 671 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 86/295 (29%), Gaps = 48/295 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + L + ++ A + + +KC + + L ++ Sbjct: 100 PLLIRFSDILEDRIERLNSCFAKAIARYNYSGVYRGVFPVKCNQERHLIEDLVRFGKPHQ 159 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105 G + S E+M+ YKD E I+ + +++ Sbjct: 160 FGLEAGSKPELMIALALLDTPGALLVCNGYKDREYIETAMLAQKLGQTPIIVLEQIEEVD 219 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156 + +L K L + +S + + G + +E+ + Sbjct: 220 LAIAASAQLGIKPILGVRAKLSTQGMGRWGTSTGDRAKFGLTIPEIMEAVDRLRSANLLD 279 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206 + L FH + I E ++++ +GGG+ Sbjct: 280 CLQLLHFHIGSQISAINVIKDAIQEASRIYVELAMLGADMKFLDVGGGLGVDYDGSQTNF 339 Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251 K+Y ++++ + + + E G AI ++ + L VL Sbjct: 340 YASKNYNMQNYANDIVAELKDTCSESKIPVPTLISESGRAIASHQSVLIFDVLST 394 >gi|261414912|ref|YP_003248595.1| arginine decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371368|gb|ACX74113.1| arginine decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326162|gb|ADL25363.1| arginine 2-monooxygenase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 632 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 29/267 (10%), Positives = 73/267 (27%), Gaps = 32/267 (11%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD 53 + TP L L + ++ A G + +K + + + + Sbjct: 57 VSTPVLLRFPDILDSRIEKIHECFTKATTEYGYKGGHYSIFPIKVNQQRAVLEEVVSHGS 116 Query: 54 ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108 G + S E+ + YKD + + + + K Sbjct: 117 KFNIGLEAGSKPELHAVLANMENPDALIICNGYKDEDFIELALLAQKMGKKIFIVVEKMN 176 Query: 109 DKAQKLHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEIK----- 156 + + + + P++ S + S+ G + +E+ Sbjct: 177 ELHLVVDLSRRIGVRPNIGIRIKLASSGSGKWEESGGYHSKFGLNSSELLEALDYIKEEK 236 Query: 157 ---NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + L+ + +E++ +GGG+ Sbjct: 237 MEDCMKLIHFHLGSQITNIRHIKNGLREVSQFYVQIRKMGMGLEFVDVGGGLGVDYDG-T 295 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAI 237 + ++Y+ + EA Sbjct: 296 RSSNASSVNYSIQEYANDVVYAMFEAC 322 >gi|326800401|ref|YP_004318220.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Sphingobacterium sp. 21] gi|326551165|gb|ADZ79550.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Sphingobacterium sp. 21] Length = 463 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 48/393 (12%), Positives = 106/393 (26%), Gaps = 59/393 (15%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV----MLGH 67 L NN K K + + + +SS +++ L Sbjct: 66 AILKNNYR--------GSYKYCYCTKSSHFRHVVEEALKNDIHLETSSAFDMPMIDALEK 117 Query: 68 EKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQ------LNKFKDKAQKLHKKIGL 120 + + +K + + + F + D +L + L Sbjct: 118 KGVVSKDITVICNGFKTFQYKQYIVDMLHDGFKNIIPVLDNKEEFNLYDDEVELDEPCNL 177 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGLMFHNNCENKSFLCFS 176 I + +R R+ + + + V L F N + Sbjct: 178 GIRIAAEEQPDSQFYTSRLGVRMEDILDFYNNKIVHNPNFKVKLLHFFINSGISDTPYYW 237 Query: 177 AMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSE 223 L+ +F ++ + +GGG+ + + + + + E Sbjct: 238 NELEKYVTLYCKFKKINPDLDTLDIGGGMPFKDSLVHDFDYEYMVNEIVNRIKEICALHE 297 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLL----YQE 277 I E G+ V + + VL + +++D S ++PD Y Sbjct: 298 VMEPDIITEFGKYTVAEASGILYKVLGRKQQNDREKWLMLDGSFITNLPDVWALNQKYIL 357 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIF-----GEFHFEKPVKIGDRISFEDVAGYNINRKN 332 ++ + G +C D + F + + F Y + Sbjct: 358 LPINNWDSEYERVNLGGITCDGQDYYNQEAHMNNVFMPRTRKVQYLGFFHTGAYQEVL-S 416 Query: 333 WFNGI-----NMPTIAVKNVDGTIKAIREFSYN 360 + GI P + + R+ ++N Sbjct: 417 GYGGIHHCLLPSPKHVIIRRN------RDETFN 443 >gi|302753366|ref|XP_002960107.1| hypothetical protein SELMODRAFT_70229 [Selaginella moellendorffii] gi|300171046|gb|EFJ37646.1| hypothetical protein SELMODRAFT_70229 [Selaginella moellendorffii] Length = 613 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 29/268 (10%), Positives = 69/268 (25%), Gaps = 33/268 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + + L L + A + + +KC + + + Sbjct: 62 PLIIRFPELLGARLRELQSAFQGAIHALGYNNRFQGVFPVKCNPDKLLVEEIVAAGKPFA 121 Query: 53 DGTTSSSLYEVML---GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E++L K + YKD E + ++ + + L + + Sbjct: 122 FGLEAGSKPELLLTMSAMCKAHPDAFLICNGYKDAEYVQLALLARSLGMDCIIVLEQLDE 181 Query: 110 KAQKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEIK------ 156 + L I P+ + + + G + +E + Sbjct: 182 VDLVIEMSQRLGIEPAIGVRSKLHTKHGGHWGETCGEGGKFGLSAPEIVEVARRLRRQGM 241 Query: 157 --NVNGLMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 + + FH + + E + + +GGG+ Sbjct: 242 LDCLELVHFHVGSQIPCLSVVKDSVSEAAFLYCELALMGAGMRILDIGGGLGIDYDGSAS 301 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + +Y+ + A Sbjct: 302 ASSDMSVGYTVPEYASAVVAAIDAACAM 329 >gi|254300827|ref|ZP_04968271.1| Orn/DAP/Arg decarboxylases family 2 [Burkholderia pseudomallei 406e] gi|157810918|gb|EDO88088.1| Orn/DAP/Arg decarboxylases family 2 [Burkholderia pseudomallei 406e] Length = 155 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 11/129 (8%) Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQESATI 281 +I LE G +V+ +V+D + +V H + + + Sbjct: 27 EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNLGQLIRRNYPVV 86 Query: 282 YPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 N V G C DI + GD + Y + F Sbjct: 87 VGNRVVGDDRERVNVVGPLCTPLDIIAHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 146 Query: 337 INMPTIAVK 345 + Sbjct: 147 QPAAREVIV 155 >gi|40642984|emb|CAD91418.1| ornithine decarboxylase [Crassostrea gigas] Length = 186 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 3/118 (2%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ V A+KC + + L+ +S E+M Sbjct: 40 FFIGDLGDIIAKYQVWKETLPR--VMPFYAVKCNDDYAVLKLLSDIGVNFDCASKAEIMK 97 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y K + + + ++ K KA K+ LRI Sbjct: 98 VLDLGVDPSRIIYANPCKQNSFIKYAAKKNVEMMTFDNEDELHKVKALFPEAKLVLRI 155 >gi|167751940|ref|ZP_02424067.1| hypothetical protein ALIPUT_00182 [Alistipes putredinis DSM 17216] gi|167660181|gb|EDS04311.1| hypothetical protein ALIPUT_00182 [Alistipes putredinis DSM 17216] Length = 464 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 50/400 (12%), Positives = 113/400 (28%), Gaps = 53/400 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMDG 54 TP + K+ ++ A + A K+ K + + + Sbjct: 42 GTPLKITYLPKISQQINRAKRMFNVAMAKVDYKGTYNYCYCTKSSHFSFVLEEAMKNDIH 101 Query: 55 TTSSSLYEVMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ----LN 105 +SS Y++ + + + + +K + ++ F Sbjct: 102 LETSSAYDIHIINALYDSGVIDKDRYIICNGFKRPQYVENIAQLINDGFENTIPVIDNKE 161 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGL 161 + + +K + I + +R R + +++ + L Sbjct: 162 EIDLYDDAITQKCKIGIRIASEEEPKFEFYTSRLGIRYNDIINFYKTKIQKNKKFKLKML 221 Query: 162 MFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKD 208 F N K + L E ++ +++GGG + Sbjct: 222 HFFINTGIKDTAYYWNELSKCLNIYCELKAICPDLDSLNIGGGFPIKNSLDFSYDYEYLT 281 Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVE 266 + + + + I+ E G V + ++++ + N ++DSS Sbjct: 282 EEIIAQIKNICTRNGIDEPHIFTEFGSFTVGESGATLYSIVNQKQQNDRENWYMIDSSFI 341 Query: 267 AHVPDYL-LYQESATIYPNTGPYTAM---VCGRSCLAGDIF-----GEFHFEKPVKIG-- 315 +PD + Q + N + G +C + D + F ++ G Sbjct: 342 TTLPDTWGINQRYIMLAINNWDKEYQRVLLGGLTCDSEDFYNSESHINAIFLPKLEPGNP 401 Query: 316 DRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350 I F Y + F G I P + + D Sbjct: 402 QYIGFFHTGAYQESIG-GFGGIQHCLIPAPKHVIIDRDKD 440 >gi|300175606|emb|CBK20917.2| unnamed protein product [Blastocystis hominis] Length = 356 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 36/125 (28%), Gaps = 14/125 (11%) Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP------- 283 +E T+ T ++ + + Y P Sbjct: 229 IEASRFFTEKAYTIYTRIIGKKVKHFGEIPHYLYYTDNGVYCSFYNRHINNEPLNPIPIK 288 Query: 284 -----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY-NINRKNWFNGI 337 + Y + + G +C + D G ++IGD + FE+ Y N FNG Sbjct: 289 VSSSTDDSLYESTLFGPTCDSIDTLGTNFLLPDLEIGDWLKFEECG-YLCSNYSPQFNGF 347 Query: 338 NMPTI 342 P Sbjct: 348 EDPAE 352 >gi|218679894|ref|ZP_03527791.1| diaminopimelate decarboxylase protein [Rhizobium etli CIAT 894] Length = 69 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 8/62 (12%), Positives = 17/62 (27%), Gaps = 3/62 (4%) Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 G+ K GD I+ Y + +N + + +Y + Sbjct: 2 IGKMVMP---KPGDLIAVSTAGAYGAVQAGTYNSRLLVPEVLVKGSDFHVIRPRRTYAEL 58 Query: 363 YN 364 + Sbjct: 59 IS 60 >gi|330959984|gb|EGH60244.1| arginine decarboxylase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 637 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLDYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A+ S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + K E +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|330938314|gb|EGH41959.1| arginine decarboxylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 637 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A+ S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + K E +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|330887965|gb|EGH20626.1| arginine decarboxylase [Pseudomonas syringae pv. mori str. 301020] Length = 637 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A+ S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + K E +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|330873614|gb|EGH07763.1| arginine decarboxylase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 637 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A+ S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + K E +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|330867156|gb|EGH01865.1| arginine decarboxylase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330871044|gb|EGH05753.1| arginine decarboxylase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 637 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A+ S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + K E +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|283788540|ref|YP_003368405.1| biosynthetic arginine decarboxylase [Citrobacter rodentium ICC168] gi|282951994|emb|CBG91721.1| biosynthetic arginine decarboxylase [Citrobacter rodentium ICC168] Length = 658 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEVAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAAQVLQLVEILREHGRLDSI 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + K C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSKSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|237798392|ref|ZP_04586853.1| arginine decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021244|gb|EGI01301.1| arginine decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 637 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A+ S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + K E +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|71734047|ref|YP_276540.1| arginine decarboxylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257483361|ref|ZP_05637402.1| arginine decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627378|ref|ZP_06460332.1| arginine decarboxylase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647847|ref|ZP_06479190.1| arginine decarboxylase [Pseudomonas syringae pv. aesculi str. 2250] gi|71554600|gb|AAZ33811.1| arginine decarboxylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322720|gb|EFW78813.1| arginine decarboxylase [Pseudomonas syringae pv. glycinea str. B076] gi|320330495|gb|EFW86474.1| arginine decarboxylase [Pseudomonas syringae pv. glycinea str. race 4] gi|330987584|gb|EGH85687.1| arginine decarboxylase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012576|gb|EGH92632.1| arginine decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 637 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A+ S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + K E +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|28871957|ref|NP_794576.1| biosynthetic arginine decarboxylase [Pseudomonas syringae pv. tomato str. DC3000] gi|213968024|ref|ZP_03396170.1| biosynthetic arginine decarboxylase [Pseudomonas syringae pv. tomato T1] gi|301383659|ref|ZP_07232077.1| arginine decarboxylase [Pseudomonas syringae pv. tomato Max13] gi|302063182|ref|ZP_07254723.1| arginine decarboxylase [Pseudomonas syringae pv. tomato K40] gi|302131262|ref|ZP_07257252.1| arginine decarboxylase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|46397730|sp|Q87VU3|SPEA_PSESM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|28855210|gb|AAO58271.1| biosynthetic arginine decarboxylase [Pseudomonas syringae pv. tomato str. DC3000] gi|213927367|gb|EEB60916.1| biosynthetic arginine decarboxylase [Pseudomonas syringae pv. tomato T1] gi|331014720|gb|EGH94776.1| arginine decarboxylase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 637 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A+ S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + K E +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|220909300|ref|YP_002484611.1| arginine decarboxylase [Cyanothece sp. PCC 7425] gi|219865911|gb|ACL46250.1| arginine decarboxylase [Cyanothece sp. PCC 7425] Length = 655 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 92/313 (29%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P L L + ++ A + + +KC + + L ++ Sbjct: 85 PLLLRFTDILEDRIERLNACFAKAIARYNYAGNYRGVFPVKCNQQRHLIEDLVRFGKPHQ 144 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-- 109 G + S E+++ YKD E + + L + ++ Sbjct: 145 FGLEAGSKPELLIALATLNTPGALMICNGYKDREYIETAILARRLGQTCIIVLEQIEEIP 204 Query: 110 ----KAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156 +++L + L + +S + + G + + + Sbjct: 205 LVIAISRRLGIEPILGVRAKLSTKGIGRWGTSAGDRAKFGLTVPEILTAVEELRSAGMLH 264 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206 + L FH + I E +++++ +GGG+ Sbjct: 265 CLQLLHFHIGSQISAIGVIKDALREASQIYVELVRLGAKMQYLDVGGGLGVDYDGSKTNF 324 Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ + ++ + E G AI ++ + L VL SE + Sbjct: 325 HASKNYSMQNYANDVVAEIKEACAARQLPVPTLISESGRAIASHQSVLIFDVLGTSEILS 384 Query: 257 NLVIVDSSVEAHV 269 + + Sbjct: 385 TEPEPAQDEDHSI 397 >gi|22297069|gb|AAM94458.1| ornithine decarboxylase [Carica papaya] Length = 251 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 67/237 (28%), Gaps = 12/237 (5%) Query: 35 ALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNC 93 A+KC L +S E+ E + K Sbjct: 2 AVKCNPEPSFLSMLAAMGSNFDCASRAEIEYVLSLGISPERIVFANPCKPESDIIFAEKV 61 Query: 94 DTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---DK 150 + S+ +++K ++ LRI P + L E+ + Sbjct: 62 GVNLTTYDSEDEVYENKKHHPKCELLLRIKPMND--GNARCPMGPKYGALPEEIEPLLRI 119 Query: 151 IESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI--HF 204 ++ V+G+ FH N +A + E ++++ + +GGG Sbjct: 120 AQASRLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETAAKFGMSKMNVLDIGGGFTSGH 179 Query: 205 TDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV 261 + FS + + I EPG TL TT++ Sbjct: 180 QFTTAATAVKSALQQHFSNEPELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYW 236 >gi|307105415|gb|EFN53664.1| hypothetical protein CHLNCDRAFT_25497 [Chlorella variabilis] Length = 701 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 81/282 (28%), Gaps = 45/282 (15%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLG- 66 +D Y GV +K + + +Y G S E+++ Sbjct: 143 AAFRAAIDRFEYQGAYQGV---FPVKANHDRALIQAVVEYGAPHSFGLEVGSKAELVMVM 199 Query: 67 --HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 T+ YKD E ++ +C + N + + ++ + L L + P Sbjct: 200 SQLAGRPPGTNLVCNGYKDAEYMELVLHCRELGMNAMVVMEQYSEVDLLLGTARRLGVRP 259 Query: 125 SVS-------YSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCEN 169 S+ + ++ G + ++ + + ++ L FH + Sbjct: 260 SIGIRAKLTTRHNGHWGSTSGDKAKFGLRAREIVAAVNKLGDEGMLDCLHLLHFHVGSQI 319 Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-----------------DY 209 + +++ + + +I GGG+ Sbjct: 320 TNIRMVKEVMREASFLYAELVQMGASMRYIDCGGGLAVDYDGSFTDSSASMSYTLQHYAN 379 Query: 210 PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 V Q + I E G A+ ++ + L VL Sbjct: 380 DVVSAVQEVCIQRGIPPPTIITESGRALASHHSVLVFDVLTT 421 >gi|300722029|ref|YP_003711309.1| arginine decarboxylase, PLP-binding, biosynthetic [Xenorhabdus nematophila ATCC 19061] gi|297628526|emb|CBJ89096.1| arginine decarboxylase, PLP-binding, biosynthetic [Xenorhabdus nematophila ATCC 19061] Length = 634 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 78/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + +TL G Sbjct: 63 PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQQRRVIETLANADEPVG 122 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H G N I L + ++ +S++ Sbjct: 123 LEAGSKAELMAVLAHAGMTGTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIELV 182 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 183 LEEAKRLNVIPRLGVRARLASQGSGKWQASGGEKSKFGLAASQVLQLIETLRSVGRLDSL 242 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 243 QLLHFHLGSQLANIRDVATGVRESARFYVELSKLGVNIQCFDVGGGLGVDYEGTRSQSEC 302 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 303 S-VNYGLNEYANNVIWGIGDACEEH 326 >gi|238898614|ref|YP_002924295.1| biosynthetic arginine decarboxylase, PLP-binding [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259511347|sp|C4K6F4|SPEA_HAMD5 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|229466373|gb|ACQ68147.1| biosynthetic arginine decarboxylase, PLP-binding [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 633 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 93/341 (27%), Gaps = 49/341 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L K+A L+ +K + ++L + G Sbjct: 62 PALFFFPQILQHRLHAINKAFKSARDSFGYQGDYCLVYPIKVNQHRRVIESLLKSGESLG 121 Query: 55 TTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E++ GG YKD E + + + + + K + Sbjct: 122 LEAGSKAEMVAVLAYAGGTRSLIVCNGYKDREYIRLALMGEKLGYKVYLVIEKMSEIKMV 181 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNV 158 L + L + P S S+ G ++ + + Sbjct: 182 LEEAKRLNVVPRLGVRARLASEGSGKWQASGGEKSKFGLSATQVLQLVEILKSADCLSGL 241 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + E +I +GGG+ + Sbjct: 242 QLLHFHLGSQLSNIHDIATGVRESARFYVELHKLGVKISCFDVGGGLGVDYEGTRSQSDC 301 Query: 208 --DYPVKDFCQRLKEFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLDISENIKNL 258 +Y +K++ + + + +L E G A+ + T L + V+ + N Sbjct: 302 SVNYGLKEYANNVIWGIGEICNENHLPHPTVISESGRALTAHHTVLISNVIGVERNE--- 358 Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + E H P L + + + Sbjct: 359 FSPPQAPEKHSPRALESLWYTWQEMQKPDHRHSLRECLHDS 399 >gi|168015545|ref|XP_001760311.1| predicted protein [Physcomitrella patens subsp. patens] gi|162688691|gb|EDQ75067.1| predicted protein [Physcomitrella patens subsp. patens] Length = 659 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 76/270 (28%), Gaps = 33/270 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52 P + L N +DT + A +KC + + + + Sbjct: 82 PLIIRFPDILKNRMDTLQAAFDRGITRQRYAGRFQGVFPVKCNPDRYLIEEIVSHGRRIN 141 Query: 53 DGTTSSSLYEVMLGHEKFGGETHA---YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E+++ + YKD E + +I NTV L + ++ Sbjct: 142 FGLEAGSKPELLMVMAAMCNASTTAFLICNGYKDAEYVKMALAARSIGLNTVIVLEQLEE 201 Query: 110 KAQKLHKKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIE--------SE 154 + L+I P + + + + G + ++ Sbjct: 202 LDIVIKMSKQLQIRPVIGVRAKLSTKHAGHWGETSGEKGKFGLSTSEIVQVVKRLRKVDM 261 Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV 211 + L FH + S + F ++ I +GGG+ Sbjct: 262 SDCLQLLHFHIGSQIPSLSIVREGVSEAAHIFCELALMGANMKVIDIGGGLGVDYDGTHS 321 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 + E+Y+ + EA + Sbjct: 322 SSSDMSIGYNMEEYAETVVEAIKEATIQKN 351 >gi|307565693|ref|ZP_07628162.1| arginine 2-monooxygenase [Prevotella amnii CRIS 21A-A] gi|307345519|gb|EFN90887.1| arginine 2-monooxygenase [Prevotella amnii CRIS 21A-A] Length = 630 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 35/329 (10%), Positives = 87/329 (26%), Gaps = 46/329 (13%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ +K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTASCFDQAKKEYNFNAENFIIYPIKVNQMQPVVEEIITHGRKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ + YKD + I+ +++++ A+ Sbjct: 126 KPELHAVIAVQCQSDALIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIDLIAHAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163 KL+ K L I ++ S + S+ G + + + ++ + F Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLNALELLDNKGLHDSLKLIHF 245 Query: 164 HNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + L +E++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALNEAGQYYVNLRKMGYNVEFVDCGGGLGVDYDGTRSSSSESSVNY 305 Query: 221 FSEKYSVQI------------------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 ++Y E G ++ + + L VL+ + + + Sbjct: 306 SIQEYVNDCVYTFVDVSDKNNIPHPNIITESGRSLAAHHSILVIDVLETASLPEMSDDFE 365 Query: 263 SSVEAHVPDYLLYQESATIYPNTGPYTAM 291 + H LY + Sbjct: 366 AKETDHQLVRDLYDIWDNLDKRNMLEDWH 394 >gi|70734181|ref|YP_257821.1| arginine decarboxylase [Pseudomonas fluorescens Pf-5] gi|68348480|gb|AAY96086.1| biosynthetic arginine decarboxylase [Pseudomonas fluorescens Pf-5] Length = 637 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 46/305 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIGRLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E++ YKD E + + N + K Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVGLV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A K S + AD S+ G + + + Sbjct: 190 IEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 +Y + D+ + +++ I+ E G ++ + L V D+ ++ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDDV 369 Query: 259 VIVDS 263 +D+ Sbjct: 370 PQIDN 374 >gi|39997632|ref|NP_953583.1| arginine decarboxylase [Geobacter sulfurreducens PCA] gi|123459994|sp|A0A4W3|SPEA_GEOSL RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|39984524|gb|AAR35910.1| biosynthetic arginine decarboxylase [Geobacter sulfurreducens PCA] gi|298506571|gb|ADI85294.1| biosynthetic arginine decarboxylase [Geobacter sulfurreducens KN400] Length = 635 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 80/269 (29%), Gaps = 33/269 (12%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + + + KNA + +K + + + ++ G S Sbjct: 67 DVLQGRIASINRVFKNAIDENDYPATYQTFYPIKVNQQRQVVEAIAKFGKRYNIGLEVGS 126 Query: 60 LYEVMLGHEKFGGETH-AYNVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQ 112 E+++G G YKD E + TI+ + +L K ++ Sbjct: 127 KPELVIGISFATGNGIPIICNGYKDTEYIETVLYATKIGYDITIVVEKMFELEKIIALSK 186 Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIES--------EIKNVNGLMF 163 K K L I +S ++ G + + I + + V L F Sbjct: 187 KTGIKPKLGIRVKLSSKGTGKWATSGGEDAKFGLRMSEIIAAIGLLEQNDLLDRVKLLHF 246 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + + L + + I ++ +GGG+ + + Sbjct: 247 HIGSQITKIDKIKSALIEGTRIYAEMRKLGVGIRYVDIGGGLGVDYDG-SKSSYFSSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVL 249 E+Y+ + + I + ++ Sbjct: 306 SIEEYANDVIYQIKN-ICEDAGVECPNII 333 >gi|170723759|ref|YP_001751447.1| arginine decarboxylase [Pseudomonas putida W619] gi|169761762|gb|ACA75078.1| arginine decarboxylase [Pseudomonas putida W619] Length = 637 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 86/298 (28%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 G + S E++ YKD E + + N + K + A Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189 Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 + + L++ P V S + AD S+ G I + + Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLISVVQRFRDAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHND 367 >gi|77456855|ref|YP_346360.1| arginine decarboxylase [Pseudomonas fluorescens Pf0-1] gi|77380858|gb|ABA72371.1| biosynthetic arginine decarboxylase [Pseudomonas fluorescens Pf0-1] Length = 637 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 46/305 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIERLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E++ YKD E + + N + K Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVGLV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A K S + AD S+ G + + + Sbjct: 190 IEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 +Y + D+ + +++ I+ E G ++ + L V D+ ++ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQALPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDDV 369 Query: 259 VIVDS 263 +++ Sbjct: 370 PQIEN 374 >gi|298373176|ref|ZP_06983166.1| arginine decarboxylase, biosynthetic [Bacteroidetes oral taxon 274 str. F0058] gi|298276080|gb|EFI17631.1| arginine decarboxylase, biosynthetic [Bacteroidetes oral taxon 274 str. F0058] Length = 463 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 53/400 (13%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMDG 54 TP + K+ N+ A A K+ K + + + ++ Sbjct: 42 GTPLRIAYLPKIGQNIQRARRAFNVAMAKVDYQGDYNYCYCTKSSHFSFVMEEVLKHNVH 101 Query: 55 TTSSSLY-----EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--- 106 +SS + E + + +T+ +K + + N + F + + Sbjct: 102 IETSSAFDMNILENLYENGFLKPDTYILCNGFKRPQYVENIENLVDLGFKNIIPILDNKF 161 Query: 107 ---FKDKAQKLHKKIGLRINPSVSYSKFILADPNR--PFSRLGEKCKDKIESEIKNVNGL 161 + K IG+RI + K ++ ++ L Sbjct: 162 ELDLFNITPKRKFNIGIRIAAEEEPKFDFYTSRLGIRYNDIIPYCEKKIKPNKNVSLKML 221 Query: 162 MFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH---FTDKDYPVKDFC 215 F N + + L + E H ++ +++GGG D DY + Sbjct: 222 HFFINTGIRDTAYYWNELNKVVNLYCELKHIFPSLDSLNIGGGFPIQAHLDFDYDYEYMA 281 Query: 216 QRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVE 266 + + +K I+ E G V + + ++++ + ++DSS Sbjct: 282 EEIVAQIKKTCKNNGVEDPHIFTEFGSYTVGESGAMLYSIINQKQQNDRELWNMIDSSFM 341 Query: 267 AHVPDYLL----YQESATIYPNTGPYTAMVCGRSCLAGDIF-----GEFHFEKPVKIGD- 316 +PD Y A + + G +C + D + F + G+ Sbjct: 342 TTLPDTWAINQRYVFLAINNWDKEYERVHMGGLTCDSEDFYNAEAHSNAIFMPKITNGEE 401 Query: 317 -RISFEDVAGYNINRKNWFNGINM-----PTIAVKNVDGT 350 + F + Y + F GI P + V + D T Sbjct: 402 QYVGFFHMGAYQESLG-GFGGIQHCLIPGPKLVVIDRDET 440 >gi|260591838|ref|ZP_05857296.1| arginine 2-monooxygenase [Prevotella veroralis F0319] gi|260536122|gb|EEX18739.1| arginine 2-monooxygenase [Prevotella veroralis F0319] Length = 630 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 27/260 (10%), Positives = 74/260 (28%), Gaps = 28/260 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ +K K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTSSCFEKAKKEYDFKAENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++++ A+ Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIDLIARAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163 KL+ K L I ++ S + S+ G + +++ ++ + F Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALETLDAKGLHDSLRLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + ++++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALNEAAQYYVNLRKMGYNVDFVDCGGGLGVDYDGTRSSSSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTN 240 ++Y +A + Sbjct: 306 SIQEYVNDCVYTFVDAANKS 325 >gi|259909599|ref|YP_002649955.1| arginine decarboxylase [Erwinia pyrifoliae Ep1/96] gi|224965221|emb|CAX56753.1| Biosynthetic arginine decarboxylase [Erwinia pyrifoliae Ep1/96] Length = 658 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 74/262 (28%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRACESYGYNGDYFLVYPIKVNQHKRVIESLINSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVKLV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158 ++A++L+ L I ++ + + G ++ + Sbjct: 207 LEEAERLNVIPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRVESL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ + G A Sbjct: 327 S-VNYGLNEYANNVIWAIGAAC 347 >gi|33866889|ref|NP_898448.1| arginine decarboxylase [Synechococcus sp. WH 8102] gi|46397729|sp|Q7U3S0|SPEA_SYNPX RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|33639490|emb|CAE08874.1| arginine decarboxylase [Synechococcus sp. WH 8102] Length = 644 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 26/234 (11%), Positives = 68/234 (29%), Gaps = 31/234 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + L + L+ + A + + +KC + + L ++ Sbjct: 65 PLLIRFDDILEDRLERLHAAFERAIAQYSYTGRYQGVFPVKCNQQRHVVEELVICGKRWN 124 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ E YKD + + +++ Sbjct: 125 FGLEAGSKAELLIALSLLDDPEALLICNGYKDRLYIETAILARRLGRQPVVVIEQPDEVD 184 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156 + + ++ L + + +S ++ G + + + + Sbjct: 185 RIIEASKSLGAAPYIGVRAKLSSRSTGRWGSSVGDKAKFGLSIPELLATVERLRESNLLP 244 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK 207 ++ L FH + L+ I E + ++ +GGG+ Sbjct: 245 DLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMGFLDVGGGLGIDYD 298 >gi|294055064|ref|YP_003548722.1| arginine decarboxylase [Coraliomargarita akajimensis DSM 45221] gi|293614397|gb|ADE54552.1| arginine decarboxylase [Coraliomargarita akajimensis DSM 45221] Length = 641 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 74/288 (25%), Gaps = 48/288 (16%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + + A + + +K + + + + G S Sbjct: 74 DMLRTRVVQLNELFAEAIAGEGYQGQYRGVFPIKVNQLREVVEEIREAGKPYHYGLECGS 133 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------KFKDKAQ 112 E+M+ + YKD E + + + + ++ Sbjct: 134 KPELMIALAMHKDPKALIICNGYKDDEFIRMALYGRRLGKEIYLVVEQLSEVPRIIQISK 193 Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIES--------EIKNVNGLMF 163 KL + +S S + ++ G + +++ + + F Sbjct: 194 KLGIDPLIGFRIKLSTSGEGKWASSSGEDAKFGLTSPEIVDAARRLKRAGLEHCLKLIHF 253 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207 H + ++ E + + +GGG+ Sbjct: 254 HVGSQVPNIQTIKKAVVEATRFYCELSKMGFDMSLLDVGGGLGIDYDGSRSNYESSMNYT 313 Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 V + + E + I E G AIV + L T V D Sbjct: 314 LREYTRDVVYNIKSICEDAGVPVPDIVSESGRAIVAPHSILVTEVCDR 361 >gi|73974235|ref|XP_858656.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 8 [Canis familiaris] Length = 292 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 27/70 (38%) Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337 + +T+ + G SC D E + +GD + F+++ +++ + FN Sbjct: 184 HKKYKKDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAFNDF 243 Query: 338 NMPTIAVKNV 347 P I Sbjct: 244 QRPAIYYMMS 253 Score = 49.8 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 2/55 (3%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +++ D K++ I +K +KC + + + L G SS Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSK 92 >gi|300718237|ref|YP_003743040.1| Biosynthetic arginine decarboxylase [Erwinia billingiae Eb661] gi|299064073|emb|CAX61193.1| Biosynthetic arginine decarboxylase [Erwinia billingiae Eb661] Length = 658 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 34/266 (12%), Positives = 79/266 (29%), Gaps = 30/266 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYRGDYFLVYPIKVNQHKRVIESLINSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 147 LEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVKLV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESE--------IKNV 158 ++A++L+ L I ++ + + G ++ ++++ Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVDIMREAGRMESL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNT 241 + +Y+ + G+A + Sbjct: 327 S-VNYGLNEYANNVIWAIGDACEEHN 351 >gi|237729871|ref|ZP_04560352.1| biosynthetic arginine decarboxylase [Citrobacter sp. 30_2] gi|226908477|gb|EEH94395.1| biosynthetic arginine decarboxylase [Citrobacter sp. 30_2] Length = 666 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 95 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 154 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 155 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 214 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 215 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAANQVLQLVEILRERGRLDSI 274 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 275 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 334 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 335 S-VNYGLNEYANNIIWAIGDACEEH 358 >gi|15600032|ref|NP_253526.1| arginine decarboxylase [Pseudomonas aeruginosa PAO1] gi|107103938|ref|ZP_01367856.1| hypothetical protein PaerPA_01005009 [Pseudomonas aeruginosa PACS2] gi|116052987|ref|YP_793305.1| arginine decarboxylase [Pseudomonas aeruginosa UCBPP-PA14] gi|218893933|ref|YP_002442802.1| arginine decarboxylase [Pseudomonas aeruginosa LESB58] gi|254244263|ref|ZP_04937585.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa 2192] gi|296391671|ref|ZP_06881146.1| arginine decarboxylase [Pseudomonas aeruginosa PAb1] gi|313109829|ref|ZP_07795764.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa 39016] gi|48474962|sp|Q9HUX1|SPEA_PSEAE RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|9951109|gb|AAG08224.1|AE004897_2 biosynthetic arginine decarboxylase [Pseudomonas aeruginosa PAO1] gi|115588208|gb|ABJ14223.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa UCBPP-PA14] gi|126197641|gb|EAZ61704.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa 2192] gi|218774161|emb|CAW29978.1| arginine decarboxylase (ADC) [Pseudomonas aeruginosa LESB58] gi|310882266|gb|EFQ40860.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa 39016] Length = 636 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 81/298 (27%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRKLTGAFDANIERLEYQSRYTALYPIKVNQQEAVVENIIATENVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIKLALMGQKLGHNVFIVIEKESEVQLV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A + S + AD ++ G + + V Sbjct: 190 IEEAANVGVQPQVGLRVRLSSLASSKWADTGGEKAKFGLSAAQLLSVVERFRQAGLDQGV 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G A+ + L T V D+ + Sbjct: 310 SINYDIDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRALTAHHAVLITQVTDVERHND 367 >gi|152988604|ref|YP_001350880.1| arginine decarboxylase [Pseudomonas aeruginosa PA7] gi|150963762|gb|ABR85787.1| arginine decarboxylase [Pseudomonas aeruginosa PA7] Length = 636 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 39/296 (13%), Positives = 81/296 (27%), Gaps = 46/296 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRKLTGAFDANIQRLEYQSRYTALYPIKVNQQEAVVENIIATENVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVQLV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A + S + AD ++ G + + V Sbjct: 190 IEEAATVGVQPQVGLRVRLSSLASSKWADTGGEKAKFGLSAAQLLSVVERFRKAGLDQGV 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISEN 254 +Y + D+ + +++ I+ E G A+ + L T V D+ + Sbjct: 310 SINYDIDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRALTAHHAVLITQVTDVERH 365 >gi|209527786|ref|ZP_03276279.1| arginine decarboxylase [Arthrospira maxima CS-328] gi|209491773|gb|EDZ92135.1| arginine decarboxylase [Arthrospira maxima CS-328] Length = 653 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 96/313 (30%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIR-------KNAGV-KLLLALKCFAAWGMFDTLNQYM---- 52 P + L + ++ GV + + +KC + + L ++ Sbjct: 82 PLLIRFPDILEDRIERLNACFSKAIARYNYPGVYRGVYPVKCNQERHLIEDLVRFGEPYQ 141 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--D 109 G + S E+++ YKD + + T+ + + + + Sbjct: 142 LGLEAGSKPELLIALACLTTPGALLICNGYKDRQYIETAMLAQRLGRKTIVVMEQLEEVE 201 Query: 110 KAQKLHKKIGLRINPSVSYS-----KFILADPNRPFSRLGEKCKDKIESEIK-------- 156 A + +G++ V ++ G + I+ + Sbjct: 202 LAIAASQNLGIQPILGVRAKLGSRGVGRWGGSTGDRAKFGLTIPEIIQVCDRLQGLGMLD 261 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------- 206 + L FH + S ++ + E ++++ +GGG+ Sbjct: 262 CLQLLHFHIGSQISSISAIKDAIREASQIYVELAKLGANMQYLDVGGGLGVDYDGSKTNA 321 Query: 207 ---KDYPVKDFCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ + ++ Q + E G AI ++ + L +L SE Sbjct: 322 PASKNYNMQNYANDIVAEVKEACEQGKIDAPVLISESGRAIASHQSILVFDILGSSEPST 381 Query: 257 NLVIVDSSVEAHV 269 + + + Sbjct: 382 ANPPNINDDDHLL 394 >gi|325300120|ref|YP_004260037.1| Biosynthetic arginine decarboxylase [Bacteroides salanitronis DSM 18170] gi|324319673|gb|ADY37564.1| Biosynthetic arginine decarboxylase [Bacteroides salanitronis DSM 18170] Length = 630 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 88/313 (28%), Gaps = 49/313 (15%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ + G ++ +K + + + + Sbjct: 59 PMLVRFPDILDNRIEKISNCFQQAAEEYGYNAQNFIIYPIKVNQMRPVVEEIISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ ++ YKD + ++ ++L Sbjct: 119 LGLEAGSKPELHTVIAINTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKQNELR 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156 A++L+ + + I ++ S + + S+ G + +E+ Sbjct: 179 LIAKIAKQLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFIKEKKMED 238 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + + + +E++ +GGG+ + Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLYKMGFPVEFVDIGGGLGVDYDGTRSSN 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G ++ + + L VL+ + Sbjct: 299 SESSVNYSIQEYVNDSISIMVDASNKNGIPHPNIITESGRSLTAHHSVLIFEVLETASLP 358 Query: 256 KNLVIVDSSVEAH 268 + + H Sbjct: 359 SMDEEFEVGPDDH 371 >gi|325276668|ref|ZP_08142397.1| arginine decarboxylase [Pseudomonas sp. TJI-51] gi|324098195|gb|EGB96312.1| arginine decarboxylase [Pseudomonas sp. TJI-51] Length = 604 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 86/299 (28%), Gaps = 46/299 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 37 PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 96 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 G + S E++ YKD E + + N + K + A Sbjct: 97 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 156 Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 + + L++ P V S + AD S+ G + + + Sbjct: 157 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVQRFRDAGLDQGI 216 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 217 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 276 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 277 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHNDQ 335 >gi|283479676|emb|CAY75592.1| arginine decarboxylase [Erwinia pyrifoliae DSM 12163] Length = 675 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 74/262 (28%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 104 PALFCFPQILQHRLRSINAAFKRACESYGYNGDYFLVYPIKVNQHKRVIESLINSGEPLG 163 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 164 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVKLV 223 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158 ++A++L+ L I ++ + + G ++ + Sbjct: 224 LEEAERLNVIPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRVESL 283 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 284 QLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDVGGGLGVDYEGTRSQSDC 343 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ + G A Sbjct: 344 S-VNYGLNEYANNVIWAIGAAC 364 >gi|307640133|gb|ADN83824.1| diaminopimelate decarboxylase-like protein [Brachionus manjavacas] Length = 134 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 Y + + G +C D+ + F + + + F+D+ Y I+ FNGI +P Sbjct: 20 YKSSIWGPTCDGLDLVCKEIFIPELDTNECMVFKDMGAYTISGAVAFNGIPLPK 73 >gi|289768325|ref|ZP_06527703.1| lysine/ornithine decarboxylase [Streptomyces lividans TK24] gi|289698524|gb|EFD65953.1| lysine/ornithine decarboxylase [Streptomyces lividans TK24] Length = 233 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 62/207 (29%), Gaps = 14/207 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66 + D + DT + GV + A+K + L G ++S EV Sbjct: 14 VYDLAGIERRHDTLRD--ELPGVHVRFAMKACPVDEVLAALAGRGAGADAASPGEVEQAL 71 Query: 67 HEKFG-GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G H N D I +++ + A + Sbjct: 72 RAGVPAGRVHYGNTVKSDRNIAEAHRLGVRTFATDSLQDVAALAVHAPGARVFCRVAT-- 129 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK-- 180 + + N+ G+ + + + + GL H + + + + Sbjct: 130 --GGAGALWGLSNKFGCPPGDAVRVLVAARDAGLVPAGLSVHVGSQQMTSEAWHGAVDDL 187 Query: 181 -NIEKEFGHFITQIEWISLGGGIHFTD 206 ++ + G +++ ++LGGG+ Sbjct: 188 GDVLRALGRHGIRVDHVNLGGGLPALR 214 >gi|227548363|ref|ZP_03978412.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079561|gb|EEI17524.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length = 172 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 4/112 (3%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +P +++ + +++D + + GV ++ A K D + G +S Sbjct: 46 SPVNVLNAAPMESHIDELVAAGASRGVDVRVFFARKANKGLTFVDAVRDAGHGVDVASFN 105 Query: 62 EVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 E+ + GE + A D + + + I + V + + A Sbjct: 106 ELRQVIDRGVPGERIIVSAAIKTDELLRLAIDHGAVISADNVDEYERIARLA 157 >gi|307640135|gb|ADN83825.1| diaminopimelate decarboxylase-like protein [Brachionus manjavacas] Length = 134 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 Y + + G +C D+ + F + + + F+D+ Y I+ FNGI +P Sbjct: 20 YKSSIWGPTCDGLDLVCKEIFIPELDTNECMVFKDMGAYTISGAVAFNGIPLPK 73 >gi|123965287|ref|YP_001010368.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9515] gi|166220852|sp|A2BU00|SPEA_PROM5 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|123199653|gb|ABM71261.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str. MIT 9515] Length = 648 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 96/316 (30%), Gaps = 48/316 (15%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD 53 I TP L L + + A + + +KC + + + +Y D Sbjct: 66 INTPLILRFNDILKDRITELNNAFSQAIETYNYKNIFQGVFPIKCNQQKNVLEKIIEYGD 125 Query: 54 ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVS 102 G S E+++G ++ YKD + + I+ + Sbjct: 126 YWDFGLEVGSKSELLIGLSLLENKKSLLICNGYKDKKYIEIAILARKLGKQPIIVIEQID 185 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ES 153 ++ + + + L L I +S S+ G + + S Sbjct: 186 EVQRIIEAVKNLRSTPILGIRSKLSSKSSGRWGKSVGDNSKFGLSIPEIMLTIKELKEAS 245 Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDK--- 207 I + L FH + L+ + F +++I +GGG+ Sbjct: 246 LINEMKLLHFHIGSQISDISVIKDALQEASQIFVELSKLGAPMKYIDVGGGLGIDFDGTK 305 Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE 253 +Y ++++ + + I E G AIV++ + L VL S Sbjct: 306 TSSNTSTNYSLQNYANDVVATIKDSCEVNNIQHPIIISESGRAIVSHCSVLIFDVLGTSH 365 Query: 254 NIKNLVIVDSSVEAHV 269 + + + + Sbjct: 366 VSSQIKVSHQKKTSLI 381 >gi|222054775|ref|YP_002537137.1| arginine decarboxylase [Geobacter sp. FRC-32] gi|254772919|sp|B9M6H6|SPEA_GEOSF RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|221564064|gb|ACM20036.1| arginine decarboxylase [Geobacter sp. FRC-32] Length = 635 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 81/292 (27%), Gaps = 48/292 (16%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + + K+A + +K + + + Y G S Sbjct: 67 DVLQGRIASINRAFKSAISENDYPAKYQTFFPIKVNQQRQVVEAIASYGKRYNIGLEVGS 126 Query: 60 LYEVMLGHEKFGGETH-AYNVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQ 112 E++ G G YKD E + T++ + +L K + + Sbjct: 127 KPELVAGISISSGNNLPIICNGYKDSEYIETVLYATAIGYDITLVIEKLFELEKVIELVK 186 Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEI--------KNVNGLMF 163 K + L I +S ++ G + + I + V + F Sbjct: 187 KTGIQPRLGIRVKLSSKGTGKWATSGGEDAKFGLRMSEIIAAIDLLEENGLLDRVKLIHF 246 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207 H + + E IE++ +GGG+ Sbjct: 247 HIGSQITKIDKIKTALIEGARVYTELRKMGMGIEFVDIGGGLGVDYDGSKSSYFSSVNYS 306 Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 V + + + + I E G A V + + L T VL+ + Sbjct: 307 VEEYANDVIYQIKNICDDAGVECPNIISESGRATVAHYSVLVTNVLNTNTQR 358 >gi|261878989|ref|ZP_06005416.1| arginine 2-monooxygenase [Prevotella bergensis DSM 17361] gi|270334374|gb|EFA45160.1| arginine 2-monooxygenase [Prevotella bergensis DSM 17361] Length = 630 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 25/264 (9%), Positives = 74/264 (28%), Gaps = 28/264 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ + ++ K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTASCFIKAKEEYEFKADNFIIYPIKVNQMQPVVEEIITHGRKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ + YKD + + I+ +++L+ A+ Sbjct: 126 KPELHAVIAVQCQSDALIICNGYKDEDYIELALLAQKMGKRIFIVVEKLNELDTIAKVAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IKNVNGLMF 163 +L L + ++ S + + S+ G + +++ ++ + F Sbjct: 186 RLKVSPNLGVRIKLASSGSGKWEESGGDASKFGLTATELLQALRKLDAMGMHDSLRLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + ++++ GGG+ + Sbjct: 246 HIGSQITKIRRIQTALREAAQYYINLHKMGYHVDFVDCGGGLGVDYDGTRSAHSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEAIVTNTTTL 244 ++Y +A N Sbjct: 306 SIQEYVNDCVSTFVDAANKNNIPH 329 >gi|77919692|ref|YP_357507.1| arginine decarboxylase [Pelobacter carbinolicus DSM 2380] gi|77545775|gb|ABA89337.1| arginine decarboxylase [Pelobacter carbinolicus DSM 2380] Length = 636 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 81/304 (26%), Gaps = 48/304 (15%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + KNA + +K + + + Y G S Sbjct: 67 DVLQGRIAAINRAFKNAIAEYEYPASYQTFFPIKVNQQRQVVEAIAHYGKKHHMGLEVGS 126 Query: 60 LYEVMLGHEKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD------KAQ 112 E++ GE YKD + ++ I ++ + K + ++ Sbjct: 127 KPELVAAISFATGEKLPIICNGYKDNDFIEMVLYATRIGYDITIVVEKLFELEKVIALSR 186 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNVNGLMF 163 + L I +S + + G K + + + V L F Sbjct: 187 QSGIVPKLGIRVKLSSKGTGKWATSGGDEAKFGLKISELLAAVEILKEHDMLDTVKLLHF 246 Query: 164 HNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207 H + I E +E++ +GGG+ Sbjct: 247 HIGSQITKIDKIKNALIEGTRIYVEMRKMGVGLEYMDIGGGMGVDYDGSKSSDFSSANYT 306 Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS 263 V + + + + I E G A V + + L T +L+ + + Sbjct: 307 IDEYANDVVYQVKNICDEAGVSCPNIISESGRATVAHYSVLVTNILNTNTQNALPEFDEI 366 Query: 264 SVEA 267 A Sbjct: 367 LENA 370 >gi|289809536|ref|ZP_06540165.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 94 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 9/72 (12%), Positives = 20/72 (27%), Gaps = 6/72 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P ++ D + + + A K + + + S SL E+ Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81 Query: 65 LGH-EKFGGETH 75 + +T Sbjct: 82 RALAAGYDPQTC 93 >gi|34498331|ref|NP_902546.1| arginine decarboxylase [Chromobacterium violaceum ATCC 12472] gi|48474350|sp|Q7NU27|SPEA_CHRVO RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|34104185|gb|AAQ60544.1| arginine decarboxylase [Chromobacterium violaceum ATCC 12472] Length = 626 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 36/293 (12%), Positives = 83/293 (28%), Gaps = 46/293 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L + + A + +K + ++ D Sbjct: 59 PLLVRFPDILQDRVTRLCGAFDKAIAEQGYGNRYTAIYPIKVNQQEAVVKSIIATQDVSI 118 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKF 107 G + S E+M YKD E L + I+ S+++ Sbjct: 119 GLEAGSKPELMAVLALAPKGCTIVCNGYKDREFIRLALIGERLGHQVFIVIEKESEVDLV 178 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158 ++++KL + + + +S + G I + V Sbjct: 179 IEESRKLEVRPNIGLRVRLSSLASSKWSDTGGEKGKFGLSAGQLISATDKLIAAGLGDCV 238 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 + FH + + + + + F ++ + +GGG+ Sbjct: 239 RLMHFHMGSQIANIADYRLGFREAIRYFAELRALGLPVDHVDVGGGLGVDYDGTHSRNDS 298 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251 +Y + ++ + ++ +I E G A+ + L V D+ Sbjct: 299 SINYDMAEYAHVIVSMLSEFCAENGIPHPRILSESGRAMTAHHAVLLMNVTDV 351 >gi|256784446|ref|ZP_05522877.1| lysine/ornithine decarboxylase [Streptomyces lividans TK24] Length = 245 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 62/207 (29%), Gaps = 14/207 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66 + D + DT + GV + A+K + L G ++S EV Sbjct: 26 VYDLAGIERRHDTLRD--ELPGVHVRFAMKACPVDEVLAALAGRGAGADAASPGEVEQAL 83 Query: 67 HEKFG-GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G H N D I +++ + A + Sbjct: 84 RAGVPAGRVHYGNTVKSDRNIAEAHRLGVRTFATDSLQDVAALAVHAPGARVFCRVAT-- 141 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK-- 180 + + N+ G+ + + + + GL H + + + + Sbjct: 142 --GGAGALWGLSNKFGCPPGDAVRVLVAARDAGLVPAGLSVHVGSQQMTSEAWHGAVDDL 199 Query: 181 -NIEKEFGHFITQIEWISLGGGIHFTD 206 ++ + G +++ ++LGGG+ Sbjct: 200 GDVLRALGRHGIRVDHVNLGGGLPALR 226 >gi|28268541|emb|CAD62572.1| ornithine decarboxylase [Sphaerechinus granularis] Length = 115 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 24/76 (31%), Gaps = 3/76 (3%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D ++ ++R V+ A+KC + L G +S E+ Sbjct: 42 FFIGDLGDVIQKHR--KWLRNLPRVEPHYAVKCNPDVHVLKLLAGLNIGFDCASKNEIQE 99 Query: 66 GHE-KFGGETHAYNVA 80 + + Sbjct: 100 ILKIGVSPSRIIFANP 115 >gi|296104604|ref|YP_003614750.1| biosynthetic arginine decarboxylase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059063|gb|ADF63801.1| biosynthetic arginine decarboxylase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 632 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMTEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAANQVLQLVEILRERGRLDSI 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 301 S-VNYGLNEYANNIIWAIGDACEEH 324 >gi|288550382|ref|ZP_05970216.2| arginine 2-monooxygenase [Enterobacter cancerogenus ATCC 35316] gi|288314992|gb|EFC53930.1| arginine 2-monooxygenase [Enterobacter cancerogenus ATCC 35316] Length = 637 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 66 PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMTEIAIV 185 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 186 LEEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAANQVLQLVEILRERGRLDSI 245 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329 >gi|330807331|ref|YP_004351793.1| arginine decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375439|gb|AEA66789.1| Arginine decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 637 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 81/298 (27%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E++ YKD E + + N + K Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVGLV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A K S + AD S+ G + + + Sbjct: 190 IEEAATLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPNIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|156932620|ref|YP_001436536.1| arginine decarboxylase [Cronobacter sakazakii ATCC BAA-894] gi|156530874|gb|ABU75700.1| hypothetical protein ESA_00402 [Cronobacter sakazakii ATCC BAA-894] Length = 637 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 66 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIKIV 185 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 186 LEEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEMLREANRLDSL 245 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 306 S-VNYGLNEYANNIIWAIGDAC 326 >gi|291086177|ref|ZP_06355041.2| arginine 2-monooxygenase [Citrobacter youngae ATCC 29220] gi|291068458|gb|EFE06567.1| arginine 2-monooxygenase [Citrobacter youngae ATCC 29220] Length = 637 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 66 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 186 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAANQVLQLVEILRERGRLDSI 245 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329 >gi|295097480|emb|CBK86570.1| arginine decarboxylase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 637 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 66 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMTEIAIV 185 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 186 LEEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAANQVLQLVEILRERGRLDSI 245 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329 >gi|167031628|ref|YP_001666859.1| arginine decarboxylase [Pseudomonas putida GB-1] gi|166858116|gb|ABY96523.1| arginine decarboxylase [Pseudomonas putida GB-1] Length = 637 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 86/298 (28%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 G + S E++ YKD E + + N + K + A Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189 Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 + + L++ P V S + AD S+ G + + + Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVQRFRDAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHND 367 >gi|26987305|ref|NP_742730.1| arginine decarboxylase [Pseudomonas putida KT2440] gi|46397731|sp|Q88QC7|SPEA_PSEPK RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|24981952|gb|AAN66194.1|AE016247_4 biosynthetic arginine decarboxylase [Pseudomonas putida KT2440] gi|313496941|gb|ADR58307.1| SpeA [Pseudomonas putida BIRD-1] Length = 637 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 86/298 (28%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 G + S E++ YKD E + + N + K + A Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189 Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 + + L++ P V S + AD S+ G + + + Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVQRFRDAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHND 367 >gi|148545856|ref|YP_001265958.1| arginine decarboxylase [Pseudomonas putida F1] gi|148509914|gb|ABQ76774.1| arginine decarboxylase [Pseudomonas putida F1] Length = 637 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 86/298 (28%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 G + S E++ YKD E + + N + K + A Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189 Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 + + L++ P V S + AD S+ G + + + Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVQRFRDAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHND 367 >gi|313246907|emb|CBY35759.1| unnamed protein product [Oikopleura dioica] Length = 141 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 33/113 (29%), Gaps = 5/113 (4%) Query: 3 KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 ++P L D + L + A+K G+ G ++S+ Sbjct: 31 ESPVLDLYDLEGLRGRFKEVQDALPSWNH--AFAIKTNPIRGVMLEAKNCGLGAEAASIG 88 Query: 62 EVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ + F Y + + L+ I + + ++ K Sbjct: 89 ELEHALQLGFDRSKIVYDSPVKTKAHLKHALNAEVVINLDNLEEIEKVNQLQC 141 >gi|300865387|ref|ZP_07110196.1| arginine decarboxylase [Oscillatoria sp. PCC 6506] gi|300336622|emb|CBN55346.1| arginine decarboxylase [Oscillatoria sp. PCC 6506] Length = 655 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 101/336 (30%), Gaps = 51/336 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52 P + L + ++ A + + +KC + + L ++ Sbjct: 85 PLLIRFSDILEDRIERLNSCFAKAIARYNYKNVYRGVFPVKCNQHRHLVEDLVRFGQPHY 144 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK- 110 G + S E+M+ YKD E + +V L + ++ Sbjct: 145 FGLEAGSKPELMIALATLKTPGAMLICNGYKDREYVETAILAQRLGQTSVIVLEQIEEVQ 204 Query: 111 -------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A + +G+R S + ++ G + + + Sbjct: 205 LAIEAGKALGIKPVLGVRAKLSTKGIGHWG-NSTGDRAKFGLTIPEIMRAVDELRSAEML 263 Query: 156 KNVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD------ 206 + L FH + S ++ +I E ++++ +GGG+ Sbjct: 264 DCLQLLHFHIGSQISSISIIKEAIREASHIYVELAKLGANMKYLDVGGGLGVDYDGSKTN 323 Query: 207 ----KDYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENI 255 K+Y ++++ + + + E G AI ++ + L VL S+ Sbjct: 324 FHASKNYNMQNYANDVVAGVKDACDERKLPVPILISESGRAIASHQSVLIFDVLGTSDVP 383 Query: 256 KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291 + +V E + LY+ +I Sbjct: 384 REIVEPVGEDEHLI-PRNLYEIYQSINEENYQEVYH 418 >gi|237508163|ref|ZP_04520878.1| Orn/DAP/Arg decarboxylase family 2 [Burkholderia pseudomallei MSHR346] gi|235000368|gb|EEP49792.1| Orn/DAP/Arg decarboxylase family 2 [Burkholderia pseudomallei MSHR346] Length = 155 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 11/129 (8%) Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQESATI 281 +I LE G +V+ +V+D + +V H + + + Sbjct: 27 EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNMGQLIRRNYPVV 86 Query: 282 YPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 N V G C DI + GD + Y + F Sbjct: 87 VGNRVVRDERERVNVVGPLCTPLDIIVHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 146 Query: 337 INMPTIAVK 345 + Sbjct: 147 QPAAREVIV 155 >gi|307151103|ref|YP_003886487.1| arginine decarboxylase [Cyanothece sp. PCC 7822] gi|306981331|gb|ADN13212.1| arginine decarboxylase [Cyanothece sp. PCC 7822] Length = 684 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 100/320 (31%), Gaps = 55/320 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52 P + L + ++ A + + +KC + ++L +Y Sbjct: 95 PLLIRFSDILADRIERLNACFAKAIARYNYPNVYRGVYPIKCNQHRHIVESLVRYGKPFQ 154 Query: 53 DGTTSSSLYEVMLGHEKFGGE--------THAYNVAYKDCEIDA------VLSNCDTIIF 98 G + S E+M+ YKD E + I+ Sbjct: 155 FGLEAGSKPELMIALATLEPAENPQNNQSPLLICNGYKDREYIETALLATRIGLKPIIVI 214 Query: 99 NTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEIK- 156 + +++ + +++ K L + +S + + ++ G + + + Sbjct: 215 EQLKEVDIAIEISRQFGIKPILGVRAKLSSKGIGRWGNSSGERAKFGLTIPEILAVVHRL 274 Query: 157 -------NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD 206 + L +H + S ++ + +G ++++ +GGG+ Sbjct: 275 QASEMLDCLQLLHYHVGSQISSITVVKDAIREAAQIYGELVNLGASMQYLDVGGGLGVDY 334 Query: 207 ----------KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVL 249 K+Y ++++ + ++ + E G AI + + L VL Sbjct: 335 DGSKTNFYVSKNYNMQNYANDIVAEVQEACAERNIAAPVLISESGRAITAHHSVLIFDVL 394 Query: 250 DISENIKNLVIVDSSVEAHV 269 SE + + + E + Sbjct: 395 GSSEVPRTPSLPGTEKEHLI 414 >gi|167924132|ref|ZP_02511223.1| hypothetical protein BpseBC_36578 [Burkholderia pseudomallei BCC215] Length = 155 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 11/129 (8%) Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQESATI 281 +I LE G +V+ +V+D + +V H + + + Sbjct: 27 EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNMGQLIRRNYPVV 86 Query: 282 YPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 N V G C DI + GD + Y + F Sbjct: 87 VGNRVVGDERERVNVVGPLCTPLDIIVHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 146 Query: 337 INMPTIAVK 345 + Sbjct: 147 QPAAREVIV 155 >gi|167899623|ref|ZP_02487024.1| hypothetical protein Bpse7_38170 [Burkholderia pseudomallei 7894] Length = 160 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 11/129 (8%) Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQESATI 281 +I LE G +V+ +V+D + +V H + + + Sbjct: 32 EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNMGQLIRRNYPVV 91 Query: 282 YPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 N V G C DI + GD + Y + F Sbjct: 92 VGNRVVGDERERVNVVGPLCTPLDIIVHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 151 Query: 337 INMPTIAVK 345 + Sbjct: 152 QPAAREVIV 160 >gi|15227223|ref|NP_179243.1| ADC1 (ARGININE DECARBOXYLASE 1); arginine decarboxylase [Arabidopsis thaliana] gi|12643847|sp|Q9SI64|SPE1_ARATH RecName: Full=Arginine decarboxylase 1; Short=ADC 1; Short=ADC-O; Short=ARGDC 1 gi|4589977|gb|AAD26494.1| arginine decarboxylase [Arabidopsis thaliana] gi|30794011|gb|AAP40453.1| putative arginine decarboxylase [Arabidopsis thaliana] gi|330251409|gb|AEC06503.1| arginine decarboxylase 1 [Arabidopsis thaliana] Length = 702 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 80/278 (28%), Gaps = 36/278 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L+ + + + +KC + + + ++ G Sbjct: 96 PLIVRFPDVLKNRLECLQSAFDYAIQSQGYDSHYQGVYPVKCNQDRFIIEDIVEFGSGFR 155 Query: 56 ---TSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L E +KD E ++ I+ + Sbjct: 156 FGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFKDSEYISLALFGRKLELNTVIVLEQEEE 215 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D +QK++ + GLR +S + + G + Sbjct: 216 LDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTVQILRVVRKLSQVG 274 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + L FH + S A + E ++ I +GGG+ Sbjct: 275 MLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYDGSK 334 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 + + E+Y+ + + + + + Sbjct: 335 SGESDLSVAYSLEEYA-AAVVASVRFVCDQKSVKHPVI 371 >gi|254184552|ref|ZP_04891141.1| Orn/DAP/Arg decarboxylases family 2 [Burkholderia pseudomallei 1655] gi|184215144|gb|EDU12125.1| Orn/DAP/Arg decarboxylases family 2 [Burkholderia pseudomallei 1655] Length = 155 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 11/129 (8%) Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQESATI 281 +I LE G +V+ +V+D + +V H + + + Sbjct: 27 EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNLGQLIRRNYPVV 86 Query: 282 YPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 N V G C DI + GD + Y + F Sbjct: 87 VGNRVVGDERERVNVVGPLCTPLDIIVHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 146 Query: 337 INMPTIAVK 345 + Sbjct: 147 QPAAREVIV 155 >gi|218671111|ref|ZP_03520782.1| probable ornithine decarboxylase protein [Rhizobium etli GR56] Length = 210 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 24/213 (11%), Positives = 58/213 (27%), Gaps = 18/213 (8%) Query: 46 DTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVS 102 L +S+ E+ + E ++ + A ++ Sbjct: 1 KLLAGLGSNFDCASVAEIEMALEAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHE 60 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--G 160 ++ K A + + + P + + + + G Sbjct: 61 EVEKISRAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYG 116 Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC-- 215 + FH + + + L + ++ F ++ +++GGG Sbjct: 117 VSFHVGSQMTKVDAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYG 176 Query: 216 ----QRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244 Q L+ Q +EPG +V N + Sbjct: 177 KSIYQALRTHFGNQIPQTIIEPGRGMVGNAGVI 209 >gi|1590814|gb|AAB09723.1| arginine decarboxylase [Arabidopsis thaliana] Length = 702 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 80/278 (28%), Gaps = 36/278 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L+ + + + +KC + + + ++ G Sbjct: 96 PLIVRFPDVLKNRLECLQSAFDYAIQSQGYDSHYQGVYPVKCNQDRFIIEDIVEFGSGFR 155 Query: 56 ---TSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L E +KD E ++ I+ + Sbjct: 156 FGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFKDSEYISLALFGRKLELNTVIVLEQEEE 215 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D +QK++ + GLR +S + + G + Sbjct: 216 LDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTVQILRVVRKLSQVG 274 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + L FH + S A + E ++ I +GGG+ Sbjct: 275 MLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYDGSK 334 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 + + E+Y+ + + + + + Sbjct: 335 SGESDLSVAYSLEEYA-AAVVASVRFVCDQKSVKHPVI 371 >gi|285017180|ref|YP_003374891.1| arginine decarboxylase [Xanthomonas albilineans GPE PC73] gi|283472398|emb|CBA14903.1| probable arginine decarboxylase protein [Xanthomonas albilineans] Length = 629 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 98/332 (29%), Gaps = 46/332 (13%) Query: 29 GVKLLLALKCFAAWGMFDTLNQY---MDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCE 85 G + +K G+ TL + G + S E+M YKD E Sbjct: 92 GYTAVYPIKVNQHRGVAGTLASHQGEGFGLEAGSKPELMAVLALSRPGGLIVCNGYKDRE 151 Query: 86 IDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139 + I+ S+L D+A+ L + GL + ++ + Sbjct: 152 YIRLALIGRKLGLQTFIVIEKPSELKLVLDEARVLDVRPGLGVRMRLASLGAGKWQNSGG 211 Query: 140 FS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---G 187 + G + ++ +N L FH + + + ++ + F Sbjct: 212 DKAKFGLAPRQLLDLWKTLRDTEYADALNLLHFHMGSQISNVRDIANGMREATRYFVELS 271 Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDFCQR--------------LKEFSEKY---SVQIY 230 +I + +GGG+ + + C L E++ +I Sbjct: 272 KLGAKISHVDVGGGLGIDYEGTRSRSECSINYGLHAYASNIVQPLASACEEHGLAPPRIV 331 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE----AHVPDYL-LYQESATIYPNT 285 E G A+ + L V ++ + + V E H+ + + + Sbjct: 332 TECGRAMTAHHAVLVANVSEVEQAPEGRVPDVHDDEPAAIRHMREIHAELDQRPAVELFQ 391 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 G L+ G+ + +I D Sbjct: 392 EAQHFHAEG---LSAYALGQIDLAQRARIDDL 420 >gi|238763248|ref|ZP_04624213.1| Biosynthetic arginine decarboxylase [Yersinia kristensenii ATCC 33638] gi|238698521|gb|EEP91273.1| Biosynthetic arginine decarboxylase [Yersinia kristensenii ATCC 33638] Length = 581 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 10 PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 69 Query: 55 TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E +L H N I L + ++ +S++ Sbjct: 70 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 129 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 130 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLREANSLESL 189 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 190 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 249 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 250 S-VNYGLNEYANNVIWGIGDACNEH 273 >gi|146312983|ref|YP_001178057.1| arginine decarboxylase [Enterobacter sp. 638] gi|145319859|gb|ABP62006.1| arginine decarboxylase [Enterobacter sp. 638] Length = 658 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 77/266 (28%), Gaps = 30/266 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINQAFKRARESYGYKGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G +E ++ Sbjct: 207 LEEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLELVEILRECGRLDSI 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNT 241 + +Y+ I G+A N Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEENN 351 >gi|312958754|ref|ZP_07773274.1| arginine decarboxylase [Pseudomonas fluorescens WH6] gi|311287297|gb|EFQ65858.1| arginine decarboxylase [Pseudomonas fluorescens WH6] Length = 637 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 81/298 (27%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIERLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E++ YKD E + + N + K Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVGLV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A K S + AD S+ G + + + Sbjct: 190 IEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPNIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|229588174|ref|YP_002870293.1| arginine decarboxylase [Pseudomonas fluorescens SBW25] gi|229360040|emb|CAY46894.1| biosynthetic arginine decarboxylase [Pseudomonas fluorescens SBW25] Length = 637 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 81/298 (27%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIERLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E++ YKD E + + N + K Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A K S + AD S+ G + + + Sbjct: 190 IEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G ++ + L V D+ ++ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPNIFSESGRSLTAHHAMLVVQVTDVEKHND 367 >gi|312129401|ref|YP_003996741.1| orn/dap/arg decarboxylase 2 [Leadbetterella byssophila DSM 17132] gi|311905947|gb|ADQ16388.1| Orn/DAP/Arg decarboxylase 2 [Leadbetterella byssophila DSM 17132] Length = 490 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 50/387 (12%), Positives = 110/387 (28%), Gaps = 50/387 (12%) Query: 12 QKLLNNLDTALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66 + + ++ K + K + DT ++ +SS +++ L Sbjct: 55 EHIEHSKILFKNAMKKYNYRGNYTYCYCTKSSHFKFILDTALKHNIHLETSSAFDIPLIE 114 Query: 67 --HEKFGGETHAYNVAYKDCEIDAVLSNCDTII---FNTVSQLNKFKDKAQKLHKKIGLR 121 +E+ Y + + + + I N L+ + L Sbjct: 115 TLYEEGKITKDTYVICNGHKMPQYLKNITNLINQGFVNCTPILDNLDEIDHYLENVTADH 174 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFL 173 +N + + + SRLG + KD E + L F N K Sbjct: 175 VNIGIRIATDEEPTFSFYTSRLGIRYKDVDDLYLKKIKPDERFKLKMLHFFINSGIKDTA 234 Query: 174 CFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 + + L ++ +++ I +GGG+ D+ + E E + Sbjct: 235 YYWSELTRFMFKYCEMKRICPELDSIDIGGGMPIQTSVVYNFDYQAMVDEIIENIQWICH 294 Query: 231 ----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS---VEAHVPDYLLYQE 277 E G V + + ++D + + + + + Q+ Sbjct: 295 KNNVPVPNIFTEFGSYTVGESGAILYKIIDQKQQNDRELWYMIDGSFITQLPDSWGIGQK 354 Query: 278 SATIYPNTGPYTA---MVCGRSCLAGDIFGEFHFEKPV------KIGD-RISFEDVAGYN 327 + N + G +C + D + + + + D I F Y Sbjct: 355 YIMLPINNWDAPYTKVNLGGLTCDSADYYNTESHSEDLYMPIIDEKNDQYIGFFHTGAYQ 414 Query: 328 INRKNWFNG-----INMPTIAVKNVDG 349 + + G I P + + D Sbjct: 415 ESLG-GYGGIQHCLIPAPKHVLIDRDE 440 >gi|325103507|ref|YP_004273161.1| Orn/DAP/Arg decarboxylase 2 [Pedobacter saltans DSM 12145] gi|324972355|gb|ADY51339.1| Orn/DAP/Arg decarboxylase 2 [Pedobacter saltans DSM 12145] Length = 463 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 31/235 (13%), Positives = 70/235 (29%), Gaps = 36/235 (15%) Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH-------- 203 V L F N + L+ +F +++ + +GGG+ Sbjct: 216 NFRVKLLHFFINSGISDTPYYWNELEKYVTLYCKFKKVNPELDTLDIGGGMPFKDSLVFD 275 Query: 204 --FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LV 259 + + +++ + I E G+ V + + VL + + Sbjct: 276 FDYEYMINEIVKRIKQICAAHDVMEPDIITEFGKYTVAEASGILYKVLGRKQQNDREKWL 335 Query: 260 IVDSSVEAHVPDYLL----YQESATIYPNTGPYTAMVCGRSCLAGDIFGE-----FHFEK 310 ++D S ++PD Y ++ + G +C D + + F Sbjct: 336 MLDGSFITNLPDVWALNQKYILLPINNWDSEYEKVNLGGITCDGQDYYSQEAHMNNVFMP 395 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNGI-----NMPTIAVKNVDGTIKAIREFSYN 360 + + F Y + + GI P + + R+ ++N Sbjct: 396 KTRKVQYLGFFHTGAYQEVL-SGYGGIHHCLLPSPKHVLIRRN------RDETFN 443 >gi|297567482|ref|YP_003686454.1| arginine decarboxylase [Meiothermus silvanus DSM 9946] gi|296851931|gb|ADH64946.1| arginine decarboxylase [Meiothermus silvanus DSM 9946] Length = 630 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 32/284 (11%), Positives = 77/284 (27%), Gaps = 43/284 (15%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH 67 + + Y + G L +K + +T+ + G + S E+ L Sbjct: 81 EAFRRAIQKYEYKAEYRG---LYPVKVNQRRIVVETIAKAGRPYAHGLEAGSKAELALIL 137 Query: 68 E-KFGGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E +KD + + I ++L + A++L + + Sbjct: 138 AQDLHPEAIIACNGFKDDDFIRLALMGKKLGKNVIITLEKFAELGRVMRIAKELGVEPSI 197 Query: 121 RINPSVSYSKFILADPN-RPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCE--- 168 I + + + ++ G + I + + L H + Sbjct: 198 GIRYKLKAKGSGQWEESGGESAKFGLTTPEIIRAVDLLAKAGMLGTIAMLHSHVGSQVTD 257 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-----------------DYPV 211 + + + + +++LGGG+ + Sbjct: 258 IRRIKQAVREIAQTYVQLRKLGAPVRYLNLGGGLAVDYDGSKTAFYASANYTLSEYAEDL 317 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + + + + + E G AI + L V+D Sbjct: 318 VYVTKEVCDGHGEPHPILVTESGRAITAYHSVLVLEVVDTIRPP 361 Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 23/98 (23%), Gaps = 24/98 (24%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEK---------PVKIGD--RISFEDVAGYNINRKNWFNG 336 A + +C + F F ++ G+ + Y N N Sbjct: 492 REATLVDITCDSDGKFDRFIDLHDVRNTLPVHELRPGERYYLGVFLTGAYQDVLGNSHNL 551 Query: 337 INMP--TIAVKNVDG-----------TIKAIREFSYND 361 + DG + I + Y D Sbjct: 552 FGRIGEAHVTIDEDGYDIERFVVGEKARRVIEKMGYED 589 >gi|260435501|ref|ZP_05789471.1| arginine decarboxylase [Synechococcus sp. WH 8109] gi|260413375|gb|EEX06671.1| arginine decarboxylase [Synechococcus sp. WH 8109] Length = 646 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 28/234 (11%), Positives = 66/234 (28%), Gaps = 31/234 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + L+ + A + + +KC + + L Sbjct: 67 PLLIRFDDILEDRLEQLHAAFERAIAQYSYPGRYQGVFPVKCNQQRHVVEELVSCGKRWN 126 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ E YKD + + +++ Sbjct: 127 FGLEAGSKAELLIALSLLDDPEALLICNGYKDRLYIETAILARRLGRQPVVVIEQPDEVD 186 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156 + D ++ L + I +S ++ G + + + + Sbjct: 187 RIIDASKSLGAAPYIGIRAKLSSRSTGRWGSSVGDKAKFGLSIPELLATVERLRENNLLP 246 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK 207 ++ L FH + L+ I E + ++ +GGG+ Sbjct: 247 DLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMGFLDVGGGLGIDYD 300 >gi|300771211|ref|ZP_07081087.1| arginine decarboxylase [Sphingobacterium spiritivorum ATCC 33861] gi|300761881|gb|EFK58701.1| arginine decarboxylase [Sphingobacterium spiritivorum ATCC 33861] Length = 463 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 46/393 (11%), Positives = 107/393 (27%), Gaps = 59/393 (15%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV----MLGH 67 L +N K K + + + +SS +++ L Sbjct: 66 AILKHNYR--------GSYKYCYCTKSSHFKHIVEEALKNDIHLETSSAFDMPMIDTLER 117 Query: 68 EK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ------LNKFKDKAQKLHKKIGL 120 + + +K + + + + + D +L + L Sbjct: 118 QGTVTKDITVICNGFKTYQYKQYIIDMIHDGYKNIIPVLDNKEEFNLYDDEIELDEPCNL 177 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGLMFHNNCENKSFLCFS 176 I + +R R + ++ V L F N + Sbjct: 178 GIRIASEEQPDSQFYTSRLGIRSEDIIDFYNNKIADNPNFRVKLLHFFINSGISDTPYYW 237 Query: 177 AMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSE 223 L+ +F +++ + +GGG+ + + + +++ E Sbjct: 238 NELEKYVTLYCKFKKINPELDTLDIGGGMPFKDSLVHDFDYEYMVNEIVNRIKQICAHHE 297 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLL----YQE 277 I E G+ V + + VL + ++D S ++PD Y Sbjct: 298 VMEPDIITEFGKYTVAEASGILYKVLGRKQQNDRERWFMIDGSFITNLPDVWALNQKYIL 357 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEF-----HFEKPVKIGDRISFEDVAGYNINRKN 332 ++ + G +C D + + F + + F Y + Sbjct: 358 LPINNWDSEYERVNLGGITCDGQDYYNQEAHMNSVFMPKTRKVQYLGFFHTGAYQDVL-S 416 Query: 333 WFNGI-----NMPTIAVKNVDGTIKAIREFSYN 360 + GI P + + R+ ++N Sbjct: 417 GYGGIHHCLLPSPKHVLVRRN------RDETFN 443 >gi|116071954|ref|ZP_01469222.1| arginine decarboxylase [Synechococcus sp. BL107] gi|116065577|gb|EAU71335.1| arginine decarboxylase [Synechococcus sp. BL107] Length = 646 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 28/234 (11%), Positives = 65/234 (27%), Gaps = 31/234 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + L+ + A + + +KC + + L Sbjct: 67 PLLIRFDDILEDRLERLHSAFERAIAQYGYKGRYQGVFPVKCNQQRHVVEELVSCGKRWN 126 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ + YKD + + +++ Sbjct: 127 FGLEAGSKAELLIALSLLDDPDALLICNGYKDRLYIETAILARRLGRRPVVVIEQPDEVD 186 Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIK 156 + + ++ L + I S S ++ G D + + Sbjct: 187 RIIEASRNLGAAPYIGIRAKLASRSTGRWGSSVGDKAKFGLAIPDLLTTVERLREHGLLD 246 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK 207 ++ L FH + L+ I E + ++ +GGG+ Sbjct: 247 DLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMGFLDVGGGLGIDYD 300 >gi|15603247|ref|NP_246321.1| arginine decarboxylase [Pasteurella multocida subsp. multocida str. Pm70] gi|48474635|sp|Q9CL60|SPEA_PASMU RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|12721756|gb|AAK03466.1| SpeA [Pasteurella multocida subsp. multocida str. Pm70] Length = 644 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 32/265 (12%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM- 52 + T + Q + + L + K A L+ +K + ++L Sbjct: 72 LPT-LFCF-PQIIQHRLRSINQAFKRAREDFGYEGNYFLVYPIKVNQHRRIVESLISSGQ 129 Query: 53 -DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLS-----NCDTIIFNTVSQL 104 G + S E+M L H N + L + ++ +S++ Sbjct: 130 PLGLEAGSKAELMAVLAHAGITQTVIVCNGYKDREYVRFALMGEKLGHKVYLVIEKLSEI 189 Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEI 155 ++A KL+ K L + ++ + + G + + Sbjct: 190 QLVLEEAAKLNVKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLSLVQMLKEHECL 249 Query: 156 KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK 212 + L FH + + E I+ +GGG+ + + Sbjct: 250 DCLQLLHFHLGSQLGNIRDVATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGNRTQ 309 Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAI 237 C + +Y+ + G+A Sbjct: 310 SDCS-VNYGLNEYADTVVWGIGQAC 333 >gi|298490894|ref|YP_003721071.1| arginine decarboxylase ['Nostoc azollae' 0708] gi|298232812|gb|ADI63948.1| arginine decarboxylase ['Nostoc azollae' 0708] Length = 669 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 86/295 (29%), Gaps = 48/295 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN-------AGV-KLLLALKCFAAWGMFDTLNQYM---- 52 P + L + ++ GV + + +KC + + L ++ Sbjct: 99 PLLIRFSDILEDRIERLNACFAKAIARYNYPGVYRGVFPVKCNQERHLIEDLVRFGKPHQ 158 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105 G + S E+M+ YKD E I+ + +++ Sbjct: 159 FGLEAGSKPELMIALALLNTPGALLVCNGYKDREYIETAMLSQRLGQTAIIVIEQIEEVD 218 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156 +L K L + +S + + G + +E+ K Sbjct: 219 LVIAANLQLGIKPILGVRAKLSTQGMGRWGTSTGDRAKFGLTIPEIMEAVDKLREANLLG 278 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206 + L FH + I E ++++ +GGG+ Sbjct: 279 CLQLLHFHIGSQISAINVIKDAIQEASRIYVELAMLGADMKYLDVGGGLGVDYDGSQTNF 338 Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251 K+Y ++++ + + + E G AI ++ + L VL Sbjct: 339 YASKNYNMQNYANDIVAELKDTCAERQITVPILISESGRAIASHQSVLIFDVLST 393 >gi|2331032|gb|AAB66828.1| ornithine decarboxylase [Plasmodium falciparum] Length = 947 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 82/310 (26%), Gaps = 11/310 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I T I+ QK+L V ++K + L +S+ Sbjct: 363 IDTSVVCINLQKILAQYVRFKKNL--PHVTPFYSVKSNNDEVVIKFLYGLNCNFDCASIG 420 Query: 62 EVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ + + + K + + + K + Sbjct: 421 EISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHPKCSL 480 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 LRIN K ++ E+ + N+ G+ FH K+ F Sbjct: 481 ILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAKKHNLNIVGVSFHVGSNTKNLFDFCLA 540 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +K F + + + + + D + K Y E + I Sbjct: 541 IKLCRDVFDMS-SNMVFNFYIINLGGVYPEELEYDNVK--KHDKIHYCTLSLQEIKKDIQ 597 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCL 298 T L + + ++ + D+ + P + MV S L Sbjct: 598 K--FLNEETFLKTKYGYYSFEKISLAINMSI-DHYFSHMKDNLRVICEPGSYMVAASSTL 654 Query: 299 AGDIFGEFHF 308 A I G+ Sbjct: 655 AVKIIGKRRP 664 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%) Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302 + V D + +I D + + N Y A V G+SC D+ Sbjct: 829 YFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMNFNLYLANVFGQSCDGLDM 888 Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + I D + +E Y + FNG Sbjct: 889 INSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 931 >gi|309785233|ref|ZP_07679864.1| arginine decarboxylase [Shigella dysenteriae 1617] gi|308926353|gb|EFP71829.1| arginine decarboxylase [Shigella dysenteriae 1617] gi|323162616|gb|EFZ48463.1| arginine decarboxylase [Escherichia coli E128010] gi|323183509|gb|EFZ68906.1| arginine decarboxylase [Escherichia coli 1357] gi|323188667|gb|EFZ73952.1| arginine decarboxylase [Escherichia coli RN587/1] Length = 652 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 81 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 140 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 141 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 200 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 201 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 260 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 261 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 320 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 321 S-VNYGLNEYANNIIWAIGDAC 341 >gi|227540421|ref|ZP_03970470.1| arginine decarboxylase, biosynthetic [Sphingobacterium spiritivorum ATCC 33300] gi|227239745|gb|EEI89760.1| arginine decarboxylase, biosynthetic [Sphingobacterium spiritivorum ATCC 33300] Length = 463 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 46/393 (11%), Positives = 107/393 (27%), Gaps = 59/393 (15%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV----MLGH 67 L +N K K + + + +SS +++ L Sbjct: 66 AILKHNYR--------GSYKYCYCTKSSHFKHIVEEALKNDIHLETSSAFDMPMIDTLER 117 Query: 68 EK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ------LNKFKDKAQKLHKKIGL 120 + + +K + + + + + D +L + L Sbjct: 118 QGTVTKDITVICNGFKTYQYKQYIIDMIHDGYKNIIPVLDNKEEFNLYDDEIELDEPCAL 177 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGLMFHNNCENKSFLCFS 176 I + +R R + ++ V L F N + Sbjct: 178 GIRIASEEQPDSQFYTSRLGIRSEDIIDFYNNKIADNPNFKVKLLHFFINSGISDTPYYW 237 Query: 177 AMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSE 223 L+ +F +++ + +GGG+ + + + +++ E Sbjct: 238 NELEKYVTLYCKFKKINPELDTLDIGGGMPFKDSLVHDFDYEYMVNEIVNRIKQICAHHE 297 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLL----YQE 277 I E G+ V + + VL + ++D S ++PD Y Sbjct: 298 VMEPDIITEFGKYTVAEASGILYKVLGRKQQNDRERWFMIDGSFITNLPDVWALNQKYIL 357 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEF-----HFEKPVKIGDRISFEDVAGYNINRKN 332 ++ + G +C D + + F + + F Y + Sbjct: 358 LPINNWDSEYERVNLGGITCDGQDYYNQEAHMNSVFMPKTRKVQYLGFFHTGAYQDVL-S 416 Query: 333 WFNGI-----NMPTIAVKNVDGTIKAIREFSYN 360 + GI P + + R+ ++N Sbjct: 417 GYGGIHHCLLPSPKHVLVRRN------RDETFN 443 >gi|325498498|gb|EGC96357.1| arginine decarboxylase [Escherichia fergusonii ECD227] Length = 652 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 81 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 140 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 141 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 200 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 201 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 260 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 261 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 320 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 321 S-VNYGLNEYANNIIWAIGDAC 341 >gi|294931193|ref|XP_002779780.1| arginine/diaminopimelate/ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983] gi|239889442|gb|EER11575.1| arginine/diaminopimelate/ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983] Length = 78 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 289 TAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 T ++ G +C D + ++IGD + + ++ Y FNG + P Sbjct: 13 TQVLFGPTCDGFDTIMQGVTHLPEMEIGDHLLWRNMGAYTTAAATNFNGFDTP 65 >gi|332162797|ref|YP_004299374.1| arginine decarboxylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604363|emb|CBY25861.1| biosynthetic arginine decarboxylase [Yersinia enterocolitica subsp. palearctica Y11] gi|325667027|gb|ADZ43671.1| arginine decarboxylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860342|emb|CBX70654.1| biosynthetic arginine decarboxylase [Yersinia enterocolitica W22703] Length = 659 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 88 PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 147 Query: 55 TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E +L H N I L + ++ +S++ Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLRDANSLESL 267 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351 >gi|308388669|gb|ADO30989.1| biosynthetic arginine decarboxylase [Neisseria meningitidis alpha710] Length = 630 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 70/265 (26%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + A G L+ +K + ++L G Sbjct: 59 PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118 Query: 55 TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E+M G +T YKD E + + + K + Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158 L + L + P S S+ G ++ + Sbjct: 179 LEEAEKLGVKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I +GGG+ + + C Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + +A + + Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322 >gi|290476618|ref|YP_003469523.1| arginine decarboxylase, PLP-binding, biosynthetic [Xenorhabdus bovienii SS-2004] gi|289175956|emb|CBJ82759.1| arginine decarboxylase, PLP-binding, biosynthetic [Xenorhabdus bovienii SS-2004] Length = 634 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 83/287 (28%), Gaps = 44/287 (15%) Query: 13 KLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM--DGTTSSSLYEVM-- 64 +L + R++ G K L+ +K + ++L G + S E+M Sbjct: 75 RLRSINAAFKRARESYGYKGDYFLVYPIKVNQQRRVIESLANAGEPIGLEAGSKAELMAV 134 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 L H N YKD E + + + + K + A L + L + P Sbjct: 135 LAHAGMTRTVIVCN-GYKDREYIRLALIGEKLGHKVYLVIEKMSEIAMVLEEAERLSVIP 193 Query: 125 S-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCE- 168 S S+ G ++ ++ L FH + Sbjct: 194 RLGVRARLASQGAGKWQSSGGEKSKFGLAAAQVLQLVETLRSAGKLNSLQLLHFHLGSQL 253 Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------------DYPVK 212 + E I+ +GGG+ + + Sbjct: 254 ANIRDVATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSECSVNYGLNEYAN 313 Query: 213 DFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + + E++ + E G A+ + T L + V+ + N Sbjct: 314 NVIWGIGDACEEHGLPHPTVITESGRALTAHHTVLISNVIGVEHNEF 360 >gi|238759316|ref|ZP_04620482.1| Biosynthetic arginine decarboxylase [Yersinia aldovae ATCC 35236] gi|238702477|gb|EEP95028.1| Biosynthetic arginine decarboxylase [Yersinia aldovae ATCC 35236] Length = 659 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 88 PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 147 Query: 55 TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E +L H N I L + ++ +S++ Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLRKANSLESL 267 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351 >gi|157110980|ref|XP_001651339.1| hypothetical protein AaeL_AAEL005694 [Aedes aegypti] gi|108878586|gb|EAT42811.1| conserved hypothetical protein [Aedes aegypti] Length = 417 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 91/336 (27%), Gaps = 26/336 (7%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P +L + ++ ++R + V ++ + T G SS EVM Sbjct: 36 PVHLTELDNVVK--RHYQWVRHLSAVHPFYTVRTNNDLRILGTTVLLDCGYVCSSKIEVM 93 Query: 65 LGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E E + A D + + F+T +L + I Sbjct: 94 QVLELGVDPEWILLKSAADSDDLLKFAQRKRLLLSFSTERELRNIHHVYSEAELLICFGY 153 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH---NNCENKSFLCFSAML 179 + + +V G + + ++ + Sbjct: 154 ELDPDA--------EHQSQIETHDLLNLAKELEMDVIGWSYEPSSVHLDHTTLHDAIRKG 205 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-----SVQIYLEPG 234 + I +I++G G+ KD+ + + ++ + + + I E G Sbjct: 206 REITDFAMIVGFNFNFINIGNGL-SIHKDHDISQYAAQVNRSLQDFFPDRGNFTIVAESG 264 Query: 235 EAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMV 292 T +T+ + + + ++ D+ P Sbjct: 265 PFHCAAAVTAISTINGKRVFWHPEFPSQIERVSYYLNHDFGDESSRFEPIIWKSPKDCGT 324 Query: 293 CGRSCL---AGDIFGEFHFEKPVKIGDRISFEDVAG 325 RS L + + + V D + FE+ Sbjct: 325 VCRSSLYASSNECLIDNLALPEVNEMDCMVFENQGA 360 >gi|218550186|ref|YP_002383977.1| arginine decarboxylase [Escherichia fergusonii ATCC 35469] gi|218357727|emb|CAQ90371.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia fergusonii ATCC 35469] Length = 658 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|163755454|ref|ZP_02162574.1| 50S ribosomal protein L19 [Kordia algicida OT-1] gi|161324874|gb|EDP96203.1| 50S ribosomal protein L19 [Kordia algicida OT-1] Length = 490 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 52/398 (13%), Positives = 113/398 (28%), Gaps = 61/398 (15%) Query: 13 KLLNNLDTALYIRKNAGVKLLLAL--------KCFAAWGMFDTLNQYMDGTTSSSLY--- 61 K+ N++ A NA K A K + + +SS + Sbjct: 53 KISENINNAKTWFANAMEKHNYAGNYNYCYCTKSSHFQHVLHEALKNDIHIETSSAFDID 112 Query: 62 --EVMLGHEKFGGETHAYNVAYKDCEI----DAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + K E + +K + +++N + + ++++ Sbjct: 113 IVENLKAQGKITDEAFVISNGFKRDQYVKNIGRLINNGHKNCIPIIDNYEEISLLSEEIQ 172 Query: 116 KKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171 + I + +R + + +D ++ + L F N + Sbjct: 173 GNYNIGIRIASEEEPKFEFYTSRLGIGYKNIVPFYNRDIKDNPRVTLKMLHFFINTGIRD 232 Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225 + + ++ +++GGG + DY + + + ++ Sbjct: 233 TAYYWNELLKCMKVYINLKKVCPSLDSLNIGGGFPIKNSLAFDYDYEYMIDEIIQQIKQT 292 Query: 226 S-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276 I+ E G V + VL + +++SS +PD Sbjct: 293 CDEAGVAVPNIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNMINSSFITTMPDTWAIN 352 Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEKPVKIGDRISFE 321 + ++ G +C + D +F EKP+ IG F Sbjct: 353 KRFIMLPINGWQKEYERVLLGGLTCDSDDYYNSEQHMNAIYLPKFSKEKPLYIG----FF 408 Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAI 354 + Y F G I P + + D + Sbjct: 409 NTGAYQETIG-GFGGLQHCLIPQPKHVLIDRDEEGNIV 445 >gi|123443613|ref|YP_001007585.1| arginine decarboxylase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090574|emb|CAL13443.1| biosynthetic arginine decarboxylase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 659 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 88 PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 147 Query: 55 TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E +L H N I L + ++ +S++ Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLRDANSLESL 267 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351 >gi|48474389|sp|Q83Q93|SPEA_SHIFL RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC Length = 662 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|332752983|gb|EGJ83367.1| arginine decarboxylase [Shigella flexneri 4343-70] Length = 658 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|315614900|gb|EFU95538.1| arginine decarboxylase [Escherichia coli 3431] Length = 652 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 81 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 140 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 141 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 200 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 201 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 260 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 261 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 320 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 321 S-VNYGLNEYANNIIWAIGDAC 341 >gi|147856|gb|AAA24646.1| arginine decarboxylase [Escherichia coli] Length = 658 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 75/262 (28%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + + + + G ++ ++ Sbjct: 207 LDEAERLNVVPRLGVRARLRSQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|30064254|ref|NP_838425.1| arginine decarboxylase [Shigella flexneri 2a str. 2457T] gi|30042511|gb|AAP18235.1| biosynthetic arginine decarboxylase [Shigella flexneri 2a str. 2457T] Length = 658 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|15803477|ref|NP_289510.1| arginine decarboxylase [Escherichia coli O157:H7 EDL933] gi|15833068|ref|NP_311841.1| arginine decarboxylase [Escherichia coli O157:H7 str. Sakai] gi|74313495|ref|YP_311914.1| arginine decarboxylase [Shigella sonnei Ss046] gi|82545438|ref|YP_409385.1| arginine decarboxylase [Shigella boydii Sb227] gi|82778290|ref|YP_404639.1| arginine decarboxylase [Shigella dysenteriae Sd197] gi|110643088|ref|YP_670818.1| arginine decarboxylase [Escherichia coli 536] gi|117625168|ref|YP_854156.1| arginine decarboxylase [Escherichia coli APEC O1] gi|157155489|ref|YP_001464290.1| arginine decarboxylase [Escherichia coli E24377A] gi|157162397|ref|YP_001459715.1| arginine decarboxylase [Escherichia coli HS] gi|170018818|ref|YP_001723772.1| arginine decarboxylase [Escherichia coli ATCC 8739] gi|187731827|ref|YP_001881712.1| arginine decarboxylase [Shigella boydii CDC 3083-94] gi|209920398|ref|YP_002294482.1| arginine decarboxylase [Escherichia coli SE11] gi|215488236|ref|YP_002330667.1| arginine decarboxylase [Escherichia coli O127:H6 str. E2348/69] gi|218555497|ref|YP_002388410.1| arginine decarboxylase [Escherichia coli IAI1] gi|218559930|ref|YP_002392843.1| arginine decarboxylase [Escherichia coli S88] gi|218691062|ref|YP_002399274.1| arginine decarboxylase [Escherichia coli ED1a] gi|218696536|ref|YP_002404203.1| arginine decarboxylase [Escherichia coli 55989] gi|218701650|ref|YP_002409279.1| arginine decarboxylase [Escherichia coli IAI39] gi|218706453|ref|YP_002413972.1| arginine decarboxylase [Escherichia coli UMN026] gi|227888493|ref|ZP_04006298.1| arginine decarboxylase [Escherichia coli 83972] gi|254794890|ref|YP_003079727.1| arginine decarboxylase [Escherichia coli O157:H7 str. TW14359] gi|260845608|ref|YP_003223386.1| biosynthetic arginine decarboxylase SpeA, PLP-binding [Escherichia coli O103:H2 str. 12009] gi|260857071|ref|YP_003230962.1| biosynthetic arginine decarboxylase SpeA, PLP-binding [Escherichia coli O26:H11 str. 11368] gi|291284259|ref|YP_003501077.1| Biosynthetic arginine decarboxylase [Escherichia coli O55:H7 str. CB9615] gi|293406446|ref|ZP_06650372.1| biosynthetic arginine decarboxylase [Escherichia coli FVEC1412] gi|293412300|ref|ZP_06655023.1| arginine decarboxylase [Escherichia coli B354] gi|293449270|ref|ZP_06663691.1| arginine decarboxylase [Escherichia coli B088] gi|298382183|ref|ZP_06991780.1| biosynthetic arginine decarboxylase [Escherichia coli FVEC1302] gi|300815592|ref|ZP_07095816.1| arginine decarboxylase [Escherichia coli MS 107-1] gi|300824838|ref|ZP_07104941.1| arginine decarboxylase [Escherichia coli MS 119-7] gi|300900247|ref|ZP_07118429.1| arginine decarboxylase [Escherichia coli MS 198-1] gi|300906501|ref|ZP_07124194.1| arginine decarboxylase [Escherichia coli MS 84-1] gi|300925069|ref|ZP_07140985.1| arginine decarboxylase [Escherichia coli MS 182-1] gi|300928121|ref|ZP_07143665.1| arginine decarboxylase [Escherichia coli MS 187-1] gi|300940784|ref|ZP_07155327.1| arginine decarboxylase [Escherichia coli MS 21-1] gi|300979971|ref|ZP_07174821.1| arginine decarboxylase [Escherichia coli MS 45-1] gi|300995541|ref|ZP_07181141.1| arginine decarboxylase [Escherichia coli MS 200-1] gi|301027317|ref|ZP_07190659.1| arginine decarboxylase [Escherichia coli MS 69-1] gi|301049269|ref|ZP_07196241.1| arginine decarboxylase [Escherichia coli MS 185-1] gi|301306382|ref|ZP_07212451.1| arginine decarboxylase [Escherichia coli MS 124-1] gi|301327351|ref|ZP_07220604.1| arginine decarboxylase [Escherichia coli MS 78-1] gi|307310439|ref|ZP_07590087.1| arginine decarboxylase [Escherichia coli W] gi|309794026|ref|ZP_07688451.1| arginine decarboxylase [Escherichia coli MS 145-7] gi|312964798|ref|ZP_07779038.1| arginine decarboxylase [Escherichia coli 2362-75] gi|331648692|ref|ZP_08349780.1| arginine 2-monooxygenase [Escherichia coli M605] gi|331654450|ref|ZP_08355450.1| arginine 2-monooxygenase [Escherichia coli M718] gi|331674420|ref|ZP_08375180.1| arginine 2-monooxygenase [Escherichia coli TA280] gi|331678931|ref|ZP_08379605.1| arginine 2-monooxygenase [Escherichia coli H591] gi|48474463|sp|Q8FE34|SPEA_ECOL6 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|48474910|sp|Q8XCX9|SPEA_ECO57 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|12517481|gb|AAG58069.1|AE005524_5 biosynthetic arginine decarboxylase [Escherichia coli O157:H7 str. EDL933] gi|13363286|dbj|BAB37237.1| biosynthetic arginine decarboxylase [Escherichia coli O157:H7 str. Sakai] gi|73856972|gb|AAZ89679.1| biosynthetic arginine decarboxylase [Shigella sonnei Ss046] gi|81242438|gb|ABB63148.1| biosynthetic arginine decarboxylase [Shigella dysenteriae Sd197] gi|81246849|gb|ABB67557.1| biosynthetic arginine decarboxylase [Shigella boydii Sb227] gi|110344680|gb|ABG70917.1| biosynthetic arginine decarboxylase [Escherichia coli 536] gi|115514292|gb|ABJ02367.1| arginine decarboxylase [Escherichia coli APEC O1] gi|157068077|gb|ABV07332.1| arginine decarboxylase [Escherichia coli HS] gi|157077519|gb|ABV17227.1| arginine decarboxylase [Escherichia coli E24377A] gi|169753746|gb|ACA76445.1| arginine decarboxylase [Escherichia coli ATCC 8739] gi|187428819|gb|ACD08093.1| arginine decarboxylase [Shigella boydii CDC 3083-94] gi|209760178|gb|ACI78401.1| biosynthetic arginine decarboxylase [Escherichia coli] gi|209760180|gb|ACI78402.1| biosynthetic arginine decarboxylase [Escherichia coli] gi|209760182|gb|ACI78403.1| biosynthetic arginine decarboxylase [Escherichia coli] gi|209760184|gb|ACI78404.1| biosynthetic arginine decarboxylase [Escherichia coli] gi|209760186|gb|ACI78405.1| biosynthetic arginine decarboxylase [Escherichia coli] gi|209913657|dbj|BAG78731.1| biosynthetic arginine decarboxylase [Escherichia coli SE11] gi|215266308|emb|CAS10739.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli O127:H6 str. E2348/69] gi|218353268|emb|CAU99219.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli 55989] gi|218362265|emb|CAQ99886.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli IAI1] gi|218366699|emb|CAR04456.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli S88] gi|218371636|emb|CAR19475.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli IAI39] gi|218428626|emb|CAR09410.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli ED1a] gi|218433550|emb|CAR14453.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli UMN026] gi|222034633|emb|CAP77375.1| biosynthetic arginine decarboxylase [Escherichia coli LF82] gi|227834762|gb|EEJ45228.1| arginine decarboxylase [Escherichia coli 83972] gi|254594290|gb|ACT73651.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli O157:H7 str. TW14359] gi|257755720|dbj|BAI27222.1| biosynthetic arginine decarboxylase SpeA, PLP-binding [Escherichia coli O26:H11 str. 11368] gi|257760755|dbj|BAI32252.1| biosynthetic arginine decarboxylase SpeA, PLP-binding [Escherichia coli O103:H2 str. 12009] gi|281179947|dbj|BAI56277.1| biosynthetic arginine decarboxylase [Escherichia coli SE15] gi|290764132|gb|ADD58093.1| Biosynthetic arginine decarboxylase [Escherichia coli O55:H7 str. CB9615] gi|291322360|gb|EFE61789.1| arginine decarboxylase [Escherichia coli B088] gi|291426452|gb|EFE99484.1| biosynthetic arginine decarboxylase [Escherichia coli FVEC1412] gi|291469071|gb|EFF11562.1| arginine decarboxylase [Escherichia coli B354] gi|294491214|gb|ADE89970.1| arginine decarboxylase [Escherichia coli IHE3034] gi|298277323|gb|EFI18839.1| biosynthetic arginine decarboxylase [Escherichia coli FVEC1302] gi|300298945|gb|EFJ55330.1| arginine decarboxylase [Escherichia coli MS 185-1] gi|300304814|gb|EFJ59334.1| arginine decarboxylase [Escherichia coli MS 200-1] gi|300356232|gb|EFJ72102.1| arginine decarboxylase [Escherichia coli MS 198-1] gi|300395092|gb|EFJ78630.1| arginine decarboxylase [Escherichia coli MS 69-1] gi|300401677|gb|EFJ85215.1| arginine decarboxylase [Escherichia coli MS 84-1] gi|300409373|gb|EFJ92911.1| arginine decarboxylase [Escherichia coli MS 45-1] gi|300418783|gb|EFK02094.1| arginine decarboxylase [Escherichia coli MS 182-1] gi|300454460|gb|EFK17953.1| arginine decarboxylase [Escherichia coli MS 21-1] gi|300463859|gb|EFK27352.1| arginine decarboxylase [Escherichia coli MS 187-1] gi|300522676|gb|EFK43745.1| arginine decarboxylase [Escherichia coli MS 119-7] gi|300531521|gb|EFK52583.1| arginine decarboxylase [Escherichia coli MS 107-1] gi|300838377|gb|EFK66137.1| arginine decarboxylase [Escherichia coli MS 124-1] gi|300846083|gb|EFK73843.1| arginine decarboxylase [Escherichia coli MS 78-1] gi|306909334|gb|EFN39829.1| arginine decarboxylase [Escherichia coli W] gi|307554920|gb|ADN47695.1| biosynthetic arginine decarboxylase [Escherichia coli ABU 83972] gi|308122433|gb|EFO59695.1| arginine decarboxylase [Escherichia coli MS 145-7] gi|312290354|gb|EFR18234.1| arginine decarboxylase [Escherichia coli 2362-75] gi|312947471|gb|ADR28298.1| arginine decarboxylase [Escherichia coli O83:H1 str. NRG 857C] gi|315062246|gb|ADT76573.1| biosynthetic arginine decarboxylase, PLP-binding protein [Escherichia coli W] gi|315256829|gb|EFU36797.1| arginine decarboxylase [Escherichia coli MS 85-1] gi|315289494|gb|EFU48889.1| arginine decarboxylase [Escherichia coli MS 110-3] gi|315293927|gb|EFU53279.1| arginine decarboxylase [Escherichia coli MS 153-1] gi|315295647|gb|EFU54970.1| arginine decarboxylase [Escherichia coli MS 16-3] gi|323377170|gb|ADX49438.1| arginine decarboxylase [Escherichia coli KO11] gi|323941973|gb|EGB38152.1| arginine decarboxylase [Escherichia coli E482] gi|323946562|gb|EGB42585.1| arginine decarboxylase [Escherichia coli H120] gi|323951621|gb|EGB47496.1| arginine decarboxylase [Escherichia coli H252] gi|323957337|gb|EGB53059.1| arginine decarboxylase [Escherichia coli H263] gi|324005512|gb|EGB74731.1| arginine decarboxylase [Escherichia coli MS 57-2] gi|324011790|gb|EGB81009.1| arginine decarboxylase [Escherichia coli MS 60-1] gi|324017264|gb|EGB86483.1| arginine decarboxylase [Escherichia coli MS 117-3] gi|324119735|gb|EGC13615.1| arginine decarboxylase [Escherichia coli E1167] gi|331042439|gb|EGI14581.1| arginine 2-monooxygenase [Escherichia coli M605] gi|331047832|gb|EGI19909.1| arginine 2-monooxygenase [Escherichia coli M718] gi|331068514|gb|EGI39909.1| arginine 2-monooxygenase [Escherichia coli TA280] gi|331073761|gb|EGI45082.1| arginine 2-monooxygenase [Escherichia coli H591] Length = 658 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|324115045|gb|EGC09010.1| arginine decarboxylase [Escherichia fergusonii B253] Length = 658 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|305677838|pdb|3NZQ|A Chain A, Crystal Structure Of Biosynthetic Arginine Decarboxylase Adc (Spea) From Escherichia Coli, Northeast Structural Genomics Consortium Target Er600 gi|305677839|pdb|3NZQ|B Chain B, Crystal Structure Of Biosynthetic Arginine Decarboxylase Adc (Spea) From Escherichia Coli, Northeast Structural Genomics Consortium Target Er600 Length = 666 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|78185739|ref|YP_378173.1| arginine decarboxylase [Synechococcus sp. CC9902] gi|78170033|gb|ABB27130.1| arginine decarboxylase [Synechococcus sp. CC9902] Length = 642 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 28/234 (11%), Positives = 66/234 (28%), Gaps = 31/234 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + L+ + A + + +KC + + L Sbjct: 63 PLLIRFDDILEDRLERLHSAFERAIAQYGYKGRYQGVFPVKCNQQRHVVEELVSCGKRWN 122 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E+++ + YKD + + +++ Sbjct: 123 FGLEAGSKAELLIALSLLDDPDALLICNGYKDRLYIETAILARRLGRRPVVVIEQPDEVD 182 Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIES--------EIK 156 + + ++ L + I S S ++ G D + + + Sbjct: 183 RIIEASRNLGAAPYIGIRAKLASRSTGRWGSSVGDKAKFGLAIPDLLTTVERLRDNGLLD 242 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK 207 ++ L FH + L+ I E + ++ +GGG+ Sbjct: 243 DLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMGFLDVGGGLGIDYD 296 >gi|331659074|ref|ZP_08360016.1| arginine 2-monooxygenase [Escherichia coli TA206] gi|331664522|ref|ZP_08365428.1| arginine 2-monooxygenase [Escherichia coli TA143] gi|331684567|ref|ZP_08385159.1| arginine 2-monooxygenase [Escherichia coli H299] gi|331053656|gb|EGI25685.1| arginine 2-monooxygenase [Escherichia coli TA206] gi|331058453|gb|EGI30434.1| arginine 2-monooxygenase [Escherichia coli TA143] gi|331078182|gb|EGI49388.1| arginine 2-monooxygenase [Escherichia coli H299] Length = 637 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 66 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 186 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 245 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 306 S-VNYGLNEYANNIIWAIGDAC 326 >gi|260869625|ref|YP_003236027.1| biosynthetic arginine decarboxylase SpeA, PLP-binding [Escherichia coli O111:H- str. 11128] gi|257765981|dbj|BAI37476.1| biosynthetic arginine decarboxylase SpeA, PLP-binding [Escherichia coli O111:H- str. 11128] gi|323180397|gb|EFZ65949.1| arginine decarboxylase [Escherichia coli 1180] Length = 658 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|238795139|ref|ZP_04638729.1| Biosynthetic arginine decarboxylase [Yersinia intermedia ATCC 29909] gi|238725538|gb|EEQ17102.1| Biosynthetic arginine decarboxylase [Yersinia intermedia ATCC 29909] Length = 654 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 83 PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 142 Query: 55 TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E +L H N I L + ++ +S++ Sbjct: 143 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 202 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 203 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLRDANSLESL 262 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 263 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 322 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 323 S-VNYGLNEYANNVIWGIGDACNEH 346 >gi|168747572|ref|ZP_02772594.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4113] gi|168753888|ref|ZP_02778895.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4401] gi|168760078|ref|ZP_02785085.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4501] gi|168766943|ref|ZP_02791950.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4486] gi|168773425|ref|ZP_02798432.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4196] gi|168781795|ref|ZP_02806802.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4076] gi|168785794|ref|ZP_02810801.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC869] gi|168797511|ref|ZP_02822518.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC508] gi|170679666|ref|YP_001745100.1| arginine decarboxylase [Escherichia coli SMS-3-5] gi|191167952|ref|ZP_03029755.1| arginine decarboxylase [Escherichia coli B7A] gi|193063536|ref|ZP_03044625.1| arginine decarboxylase [Escherichia coli E22] gi|193067289|ref|ZP_03048257.1| arginine decarboxylase [Escherichia coli E110019] gi|194426452|ref|ZP_03059007.1| arginine decarboxylase [Escherichia coli B171] gi|194431602|ref|ZP_03063893.1| arginine decarboxylase [Shigella dysenteriae 1012] gi|194436698|ref|ZP_03068798.1| arginine decarboxylase [Escherichia coli 101-1] gi|195936560|ref|ZP_03081942.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4024] gi|208807010|ref|ZP_03249347.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4206] gi|208812448|ref|ZP_03253777.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4045] gi|208819119|ref|ZP_03259439.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4042] gi|209398776|ref|YP_002272418.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4115] gi|217327209|ref|ZP_03443292.1| arginine decarboxylase [Escherichia coli O157:H7 str. TW14588] gi|256019259|ref|ZP_05433124.1| arginine decarboxylase [Shigella sp. D9] gi|256024551|ref|ZP_05438416.1| arginine decarboxylase [Escherichia sp. 4_1_40B] gi|261226252|ref|ZP_05940533.1| biosynthetic arginine decarboxylase, PLP-binding protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256491|ref|ZP_05949024.1| biosynthetic arginine decarboxylase SpeA, PLP-binding protein [Escherichia coli O157:H7 str. FRIK966] gi|301027741|ref|ZP_07191048.1| arginine decarboxylase [Escherichia coli MS 196-1] gi|306812157|ref|ZP_07446355.1| arginine decarboxylase [Escherichia coli NC101] gi|312972822|ref|ZP_07786995.1| arginine decarboxylase [Escherichia coli 1827-70] gi|331669681|ref|ZP_08370527.1| arginine 2-monooxygenase [Escherichia coli TA271] gi|226732564|sp|B5YQD6|SPEA_ECO5E RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|226732565|sp|B1LDE8|SPEA_ECOSM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|170517384|gb|ACB15562.1| arginine decarboxylase [Escherichia coli SMS-3-5] gi|187770953|gb|EDU34797.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4196] gi|188017820|gb|EDU55942.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4113] gi|189000561|gb|EDU69547.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4076] gi|189358378|gb|EDU76797.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4401] gi|189363682|gb|EDU82101.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4486] gi|189369222|gb|EDU87638.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4501] gi|189374158|gb|EDU92574.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC869] gi|189379697|gb|EDU98113.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC508] gi|190902037|gb|EDV61783.1| arginine decarboxylase [Escherichia coli B7A] gi|192930813|gb|EDV83418.1| arginine decarboxylase [Escherichia coli E22] gi|192959246|gb|EDV89681.1| arginine decarboxylase [Escherichia coli E110019] gi|194415760|gb|EDX32027.1| arginine decarboxylase [Escherichia coli B171] gi|194419958|gb|EDX36036.1| arginine decarboxylase [Shigella dysenteriae 1012] gi|194424180|gb|EDX40167.1| arginine decarboxylase [Escherichia coli 101-1] gi|208726811|gb|EDZ76412.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4206] gi|208733725|gb|EDZ82412.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4045] gi|208739242|gb|EDZ86924.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4042] gi|209160176|gb|ACI37609.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4115] gi|217319576|gb|EEC28001.1| arginine decarboxylase [Escherichia coli O157:H7 str. TW14588] gi|299879138|gb|EFI87349.1| arginine decarboxylase [Escherichia coli MS 196-1] gi|305854195|gb|EFM54633.1| arginine decarboxylase [Escherichia coli NC101] gi|307625487|gb|ADN69791.1| arginine decarboxylase [Escherichia coli UM146] gi|310332764|gb|EFP99977.1| arginine decarboxylase [Escherichia coli 1827-70] gi|320174065|gb|EFW49235.1| Biosynthetic arginine decarboxylase [Shigella dysenteriae CDC 74-1112] gi|320182149|gb|EFW57052.1| Biosynthetic arginine decarboxylase [Shigella boydii ATCC 9905] gi|320184286|gb|EFW59098.1| Biosynthetic arginine decarboxylase [Shigella flexneri CDC 796-83] gi|320189286|gb|EFW63945.1| Biosynthetic arginine decarboxylase [Escherichia coli O157:H7 str. EC1212] gi|320195056|gb|EFW69685.1| Biosynthetic arginine decarboxylase [Escherichia coli WV_060327] gi|320202602|gb|EFW77172.1| Biosynthetic arginine decarboxylase [Escherichia coli EC4100B] gi|320640585|gb|EFX10124.1| arginine decarboxylase [Escherichia coli O157:H7 str. G5101] gi|320645832|gb|EFX14817.1| arginine decarboxylase [Escherichia coli O157:H- str. 493-89] gi|320651132|gb|EFX19572.1| arginine decarboxylase [Escherichia coli O157:H- str. H 2687] gi|320656628|gb|EFX24524.1| arginine decarboxylase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662147|gb|EFX29548.1| arginine decarboxylase [Escherichia coli O55:H7 str. USDA 5905] gi|320667223|gb|EFX34186.1| arginine decarboxylase [Escherichia coli O157:H7 str. LSU-61] gi|323154646|gb|EFZ40845.1| arginine decarboxylase [Escherichia coli EPECa14] gi|323168009|gb|EFZ53698.1| arginine decarboxylase [Shigella sonnei 53G] gi|323173849|gb|EFZ59478.1| arginine decarboxylase [Escherichia coli LT-68] gi|326338974|gb|EGD62789.1| Biosynthetic arginine decarboxylase [Escherichia coli O157:H7 str. 1044] gi|326343145|gb|EGD66913.1| Biosynthetic arginine decarboxylase [Escherichia coli O157:H7 str. 1125] gi|330908972|gb|EGH37486.1| biosynthetic arginine decarboxylase [Escherichia coli AA86] gi|331063349|gb|EGI35262.1| arginine 2-monooxygenase [Escherichia coli TA271] gi|332087630|gb|EGI92757.1| arginine decarboxylase [Shigella dysenteriae 155-74] gi|332091331|gb|EGI96419.1| arginine decarboxylase [Shigella boydii 3594-74] gi|332999685|gb|EGK19270.1| arginine decarboxylase [Shigella flexneri VA-6] gi|333000598|gb|EGK20176.1| arginine decarboxylase [Shigella flexneri K-272] gi|333015279|gb|EGK34621.1| arginine decarboxylase [Shigella flexneri K-227] Length = 632 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321 >gi|110806847|ref|YP_690367.1| arginine decarboxylase [Shigella flexneri 5 str. 8401] gi|123342531|sp|Q0T0V3|SPEA_SHIF8 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|110616395|gb|ABF05062.1| biosynthetic arginine decarboxylase [Shigella flexneri 5 str. 8401] gi|313647989|gb|EFS12435.1| arginine decarboxylase [Shigella flexneri 2a str. 2457T] gi|332753782|gb|EGJ84161.1| arginine decarboxylase [Shigella flexneri K-671] gi|332754356|gb|EGJ84722.1| arginine decarboxylase [Shigella flexneri 2747-71] gi|332765356|gb|EGJ95574.1| arginine decarboxylase [Shigella flexneri 2930-71] gi|332999966|gb|EGK19549.1| arginine decarboxylase [Shigella flexneri K-218] gi|333015076|gb|EGK34419.1| arginine decarboxylase [Shigella flexneri K-304] Length = 632 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321 >gi|15676379|ref|NP_273515.1| arginine decarboxylase [Neisseria meningitidis MC58] gi|48474973|sp|Q9K0U3|SPEA_NEIMB RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|7225695|gb|AAF40905.1| biosynthetic arginine decarboxylase [Neisseria meningitidis MC58] gi|316984747|gb|EFV63706.1| arginine decarboxylase [Neisseria meningitidis H44/76] gi|325140888|gb|EGC63397.1| arginine decarboxylase [Neisseria meningitidis CU385] gi|325199653|gb|ADY95108.1| arginine decarboxylase [Neisseria meningitidis H44/76] Length = 630 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 68/265 (25%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + A G L+ +K + ++L G Sbjct: 59 PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118 Query: 55 TTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E+M G YKD E + + + K + Sbjct: 119 LEAGSKAELMAVLAHAGNRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158 L + L I P S S+ G ++ + Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I +GGG+ + + C Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + +A + + Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322 >gi|332086867|gb|EGI92003.1| arginine decarboxylase [Shigella boydii 5216-82] Length = 632 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321 >gi|226328786|ref|ZP_03804304.1| hypothetical protein PROPEN_02686 [Proteus penneri ATCC 35198] gi|225201972|gb|EEG84326.1| hypothetical protein PROPEN_02686 [Proteus penneri ATCC 35198] Length = 51 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 4/40 (10%), Positives = 10/40 (25%) Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 D Y + + +N + + R + Sbjct: 2 IHDTGAYGASMSSNYNSRPLIPEVLITEGVPQLIRRRQTI 41 >gi|311278144|ref|YP_003940375.1| arginine decarboxylase [Enterobacter cloacae SCF1] gi|308747339|gb|ADO47091.1| arginine decarboxylase [Enterobacter cloacae SCF1] Length = 658 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEVAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEILREHGRLDSI 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEEH 350 >gi|224584879|ref|YP_002638677.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469406|gb|ACN47236.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 652 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 81 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 140 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 141 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 200 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 201 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 260 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 261 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 320 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 321 S-VNYGLNEYANNIIWAIGDACEEH 344 >gi|113474916|ref|YP_720977.1| arginine decarboxylase [Trichodesmium erythraeum IMS101] gi|110165964|gb|ABG50504.1| arginine decarboxylase [Trichodesmium erythraeum IMS101] Length = 693 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 105/335 (31%), Gaps = 49/335 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52 P + L + ++ A + + +KC + + + ++ Sbjct: 98 PLIIRFSDILEDRIERLNACFSKAIARYKYKNIYRGVFPVKCNQNSHLVEEVVKFGKPHK 157 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105 G + S E+++ + YKD E I+ V ++ Sbjct: 158 FGLEAGSKPELLIAIATLNTTDGLIICNGYKDREYIETAILAQRLGKIPIIVIEQVEEVQ 217 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156 + ++KL+ K + I +S + G + I+ + Sbjct: 218 LVIEASRKLNIKPVVGIRVKLSTKGMGRWAGTTGDRAKFGLNIPEIIKVVNQLKSTGILD 277 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------- 206 ++ L FH + S ++ + E ++++ +GGG+ Sbjct: 278 SLQLLHFHIGSQISSISVIKDAIREASQIYVELAQLGANMKYLDVGGGLAVDYDGSKSNF 337 Query: 207 ---KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ + ++ + E G A+ ++ + L VL +S+ K Sbjct: 338 YASKNYDMQNYANDIVAEVKEACEEKNILPPILISESGRAVASHQSVLVFDVLGVSQIPK 397 Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291 V E + LY+ +I + Sbjct: 398 EEPPVIGKGEHLILQ-NLYETYQSINKDNYQEAYH 431 >gi|16130839|ref|NP_417413.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. MG1655] gi|89109715|ref|AP_003495.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. W3110] gi|170082492|ref|YP_001731812.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. DH10B] gi|188496429|ref|ZP_03003699.1| arginine decarboxylase [Escherichia coli 53638] gi|238902060|ref|YP_002927856.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli BW2952] gi|253772222|ref|YP_003035053.1| arginine decarboxylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162848|ref|YP_003045956.1| arginine decarboxylase [Escherichia coli B str. REL606] gi|300921274|ref|ZP_07137646.1| arginine decarboxylase [Escherichia coli MS 115-1] gi|300947666|ref|ZP_07161836.1| arginine decarboxylase [Escherichia coli MS 116-1] gi|300954217|ref|ZP_07166682.1| arginine decarboxylase [Escherichia coli MS 175-1] gi|301643710|ref|ZP_07243749.1| arginine decarboxylase [Escherichia coli MS 146-1] gi|331643631|ref|ZP_08344762.1| arginine 2-monooxygenase [Escherichia coli H736] gi|34395944|sp|P21170|SPEA_ECOLI RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|882467|gb|AAA69105.1| CG Site No. 161 [Escherichia coli str. K-12 substr. MG1655] gi|1789307|gb|AAC75975.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. MG1655] gi|85675748|dbj|BAE77001.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli str. K12 substr. W3110] gi|169890327|gb|ACB04034.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. DH10B] gi|188491628|gb|EDU66731.1| arginine decarboxylase [Escherichia coli 53638] gi|238860090|gb|ACR62088.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli BW2952] gi|242378464|emb|CAQ33248.1| arginine decarboxylase, biosynthetic [Escherichia coli BL21(DE3)] gi|253323266|gb|ACT27868.1| arginine decarboxylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974749|gb|ACT40420.1| arginine decarboxylase [Escherichia coli B str. REL606] gi|253978915|gb|ACT44585.1| arginine decarboxylase [Escherichia coli BL21(DE3)] gi|260448018|gb|ACX38440.1| arginine decarboxylase [Escherichia coli DH1] gi|284922883|emb|CBG35972.1| biosynthetic arginine decarboxylase [Escherichia coli 042] gi|300318801|gb|EFJ68585.1| arginine decarboxylase [Escherichia coli MS 175-1] gi|300411816|gb|EFJ95126.1| arginine decarboxylase [Escherichia coli MS 115-1] gi|300452781|gb|EFK16401.1| arginine decarboxylase [Escherichia coli MS 116-1] gi|301077912|gb|EFK92718.1| arginine decarboxylase [Escherichia coli MS 146-1] gi|309703295|emb|CBJ02631.1| biosynthetic arginine decarboxylase [Escherichia coli ETEC H10407] gi|323936056|gb|EGB32351.1| arginine decarboxylase [Escherichia coli E1520] gi|323960767|gb|EGB56388.1| arginine decarboxylase [Escherichia coli H489] gi|323971712|gb|EGB66940.1| arginine decarboxylase [Escherichia coli TA007] gi|331037102|gb|EGI09326.1| arginine 2-monooxygenase [Escherichia coli H736] Length = 658 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|121635391|ref|YP_975636.1| arginine decarboxylase [Neisseria meningitidis FAM18] gi|161870605|ref|YP_001599778.1| arginine decarboxylase [Neisseria meningitidis 053442] gi|120867097|emb|CAM10863.1| biosynthetic arginine decarboxylase [Neisseria meningitidis FAM18] gi|161596158|gb|ABX73818.1| biosynthetic arginine decarboxylase [Neisseria meningitidis 053442] gi|325132856|gb|EGC55535.1| arginine decarboxylase [Neisseria meningitidis M6190] gi|325138836|gb|EGC61387.1| arginine decarboxylase [Neisseria meningitidis ES14902] Length = 630 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + A G L+ +K + ++L G Sbjct: 59 PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118 Query: 55 TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E+M G +T YKD E + + + K + Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158 L + L I P S S+ G ++ + Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I +GGG+ + + C Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + +A + + Sbjct: 299 S-VNYSLNEYASTVVWGISQACLEH 322 >gi|293416201|ref|ZP_06658841.1| arginine decarboxylase [Escherichia coli B185] gi|291432390|gb|EFF05372.1| arginine decarboxylase [Escherichia coli B185] Length = 632 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321 >gi|301119305|ref|XP_002907380.1| ornithine decarboxylase, putative [Phytophthora infestans T30-4] gi|262105892|gb|EEY63944.1| ornithine decarboxylase, putative [Phytophthora infestans T30-4] Length = 298 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 93/283 (32%), Gaps = 22/283 (7%) Query: 82 KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS 141 + A N +F+++ +L K K + K+ LR+ S ++ Sbjct: 4 RSHLRFAREHNVPLTVFDSMDELVKIKR--EFPEAKLVLRLQVDDSKARHQFGPKFGTPM 61 Query: 142 RLGEKCKDKIESEIKNVNGLMFHNNC-------ENKSFLCFSAMLKNIEKEFGHFITQIE 194 + +S+ NV G+ FH E +F+ K + + Sbjct: 62 ADVPALLETAKSQELNVIGVCFHVGVGVGVGVLEASAFVDAIERAKQAFTMGLNAGYKFT 121 Query: 195 WISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 ++LGGG D + + F E V+I EPG V+ TL+ V Sbjct: 122 LLNLGGGFAGDDLGPVTFEAAARAINGVLDQLFPESSGVKIISEPGRYFVSACATLSVNV 181 Query: 249 LD--ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCL---AGDIF 303 + + + + A +P Y+ + P+ +V L D Sbjct: 182 IGRKVDPELTVSAQSSAEGNADLPRYMYVVNDGRHGSFSTPHLCVVSTPVVLKTANAD-- 239 Query: 304 GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 V +GD I+F + Y+ + FNG ++ Sbjct: 240 ESKAVPCSVWVGDWIAFPSMGAYSFATGSTFNGFSLHGELRVK 282 >gi|24114195|ref|NP_708705.1| arginine decarboxylase [Shigella flexneri 2a str. 301] gi|24053340|gb|AAN44412.1| biosynthetic arginine decarboxylase [Shigella flexneri 2a str. 301] Length = 668 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 91 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 150 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 151 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 210 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 211 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 270 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 271 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 330 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 331 S-VNYGLNEYANNIIWAIGDAC 351 >gi|323978765|gb|EGB73846.1| arginine decarboxylase [Escherichia coli TW10509] Length = 658 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|307139624|ref|ZP_07498980.1| arginine decarboxylase [Escherichia coli H736] gi|315137535|dbj|BAJ44694.1| arginine decarboxylase [Escherichia coli DH1] gi|332344837|gb|AEE58171.1| arginine decarboxylase SpeA [Escherichia coli UMNK88] Length = 632 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321 >gi|281602275|gb|ADA75259.1| Biosynthetic arginine decarboxylase [Shigella flexneri 2002017] Length = 662 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 91 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 150 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 151 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 210 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 211 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 270 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 271 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 330 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 331 S-VNYGLNEYANNIIWAIGDAC 351 >gi|26249359|ref|NP_755399.1| arginine decarboxylase [Escherichia coli CFT073] gi|91212320|ref|YP_542306.1| arginine decarboxylase [Escherichia coli UTI89] gi|237706410|ref|ZP_04536891.1| biosynthetic arginine decarboxylase [Escherichia sp. 3_2_53FAA] gi|332280369|ref|ZP_08392782.1| biosynthetic arginine decarboxylase [Shigella sp. D9] gi|26109767|gb|AAN81972.1|AE016766_60 Biosynthetic arginine decarboxylase [Escherichia coli CFT073] gi|91073894|gb|ABE08775.1| biosynthetic arginine decarboxylase [Escherichia coli UTI89] gi|226899450|gb|EEH85709.1| biosynthetic arginine decarboxylase [Escherichia sp. 3_2_53FAA] gi|332102721|gb|EGJ06067.1| biosynthetic arginine decarboxylase [Shigella sp. D9] Length = 662 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 91 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 150 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 151 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 210 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 211 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 270 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 271 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 330 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 331 S-VNYGLNEYANNIIWAIGDAC 351 >gi|56415025|ref|YP_152100.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|56129282|gb|AAV78788.1| biosynthetic arginine decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 658 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEEH 350 >gi|16761862|ref|NP_457479.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766387|ref|NP_462002.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143349|ref|NP_806691.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|46397722|sp|P60658|SPEA_SALTI RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|48429148|sp|P60659|SPEA_SALTY RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|25290911|pir||AG0876 arginine decarboxylase (EC 4.1.1.19) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421639|gb|AAL21961.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504164|emb|CAD02911.1| biosynthetic arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhi] gi|29138983|gb|AAO70551.1| biosynthetic arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|320087519|emb|CBY97284.1| biosynthetic arginine decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 658 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEEH 350 >gi|170766054|ref|ZP_02900865.1| arginine decarboxylase [Escherichia albertii TW07627] gi|170125200|gb|EDS94131.1| arginine decarboxylase [Escherichia albertii TW07627] Length = 632 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321 >gi|197119288|ref|YP_002139715.1| arginine decarboxylase [Geobacter bemidjiensis Bem] gi|226732566|sp|B5EIW4|SPEA_GEOBB RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|197088648|gb|ACH39919.1| biosynthetic arginine decarboxylase [Geobacter bemidjiensis Bem] Length = 635 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 88/297 (29%), Gaps = 38/297 (12%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + + + KNA + +K + + + + G S Sbjct: 67 NILEGRIASISRVFKNAISDNNYPAKYQTFYPIKVNQQRQVVEAIANFGKKYNIGLEVGS 126 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E++ G YKD E + TI+ + +L K + ++ Sbjct: 127 KPELVAAISMSTGNNLPILCNGYKDTEFIETVLFATRVGYDITIVVEKLFELEKIVEVSK 186 Query: 113 KLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIESEIK--------NVNGLMF 163 + L I +S + ++ G + + I + +V L F Sbjct: 187 RTGIVPKLGIRVKLSSKGIGKWSTSGGDDAKFGLRISELIAAIDMLKQNDMLDSVKLLHF 246 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + L + + +E++ +GGG+ + + Sbjct: 247 HVGSQITKIDKIKNALIEGTRIYAEMRKLGVNLEFLDIGGGLGVDYDG-SKSSYFSSVNY 305 Query: 221 FSEKYSVQIYLEPGEAI------VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD 271 E+Y+ + + N + + ++ +++++ + +PD Sbjct: 306 SLEEYANDVIYQVKNICDDAGVPCPNIISESGRATVAHYSVLVTDVLNNNTQTLMPD 362 >gi|254238439|ref|ZP_04931762.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa C3719] gi|126170370|gb|EAZ55881.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa C3719] Length = 636 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 80/298 (26%), Gaps = 46/298 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRKLTGAFDANIERLEYQNRYTALYPIKVNQQEAVVENIIATENVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIKLALMGQKLGHNVFIVIEKESEVQLV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A + S + AD ++ G + + V Sbjct: 190 IEEAANVGVQPQVGLRVRLSSLASSKWADTGGEKAKFGLSAAQLLSVVERFRQAGLDQGV 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + K + +G ++ I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y + D+ + +++ I+ E G A+ + L T V D+ + Sbjct: 310 SINYDIDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRALTAHHAVLITQVTDVERHND 367 >gi|238798629|ref|ZP_04642104.1| Biosynthetic arginine decarboxylase [Yersinia mollaretii ATCC 43969] gi|238717515|gb|EEQ09356.1| Biosynthetic arginine decarboxylase [Yersinia mollaretii ATCC 43969] Length = 659 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 88 PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVSSGEPLG 147 Query: 55 TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E +L H N I L + ++ +S++ Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLREANSLDSL 267 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351 Score = 36.3 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 26/204 (12%), Positives = 60/204 (29%), Gaps = 23/204 (11%) Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 E+ + ++ + +H Y + ++E+ + Sbjct: 400 ESLWDTWLEMQEPENRRSLREWLHDSQM-----DLHDVHTQYAHGMLELAQRAWAEELYL 454 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG- 286 I E + + + + ++ E + + + V+ S+ +PD + + P G Sbjct: 455 SICNEIQKQLDPSNRAHRPIIDELQERMADKLYVNFSLFQSMPDAWGIDQLFPVLPLEGL 514 Query: 287 ----PYTAMVCGRSCLA---------GDIFGEFHFEKPVKIGD--RISFEDVAGYNINRK 331 A++ +C + GD P + + F V Y Sbjct: 515 DKPPERRAVLLDITCDSDGTIDHYIDGDGVATTMPMPPYDAENPPLLGFFMVGAYQEILG 574 Query: 332 NWFNGIN-MPTI-AVKNVDGTIKA 353 N N + DGT++ Sbjct: 575 NMHNLFGDTAAVDVYVFPDGTVEV 598 >gi|238785650|ref|ZP_04629627.1| Biosynthetic arginine decarboxylase [Yersinia bercovieri ATCC 43970] gi|238713429|gb|EEQ05464.1| Biosynthetic arginine decarboxylase [Yersinia bercovieri ATCC 43970] Length = 659 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 88 PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVSSGEPLG 147 Query: 55 TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E +L H N I L + ++ +S++ Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLREANSLESL 267 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351 Score = 36.3 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 26/204 (12%), Positives = 60/204 (29%), Gaps = 23/204 (11%) Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 E+ + ++ + +H Y + ++E+ + Sbjct: 400 ESLWDTWLEMQEPENRRSLREWLHDSQM-----DLHDVHTQYAHGMLELAQRAWAEELYL 454 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG- 286 I E + + + + ++ E + + + V+ S+ +PD + + P G Sbjct: 455 SICNEIQKQLDPSNRAHRPIIDELQERMADKLYVNFSLFQSMPDAWGIDQLFPVLPLEGL 514 Query: 287 ----PYTAMVCGRSCLA---------GDIFGEFHFEKPVKIGD--RISFEDVAGYNINRK 331 A++ +C + GD P + + F V Y Sbjct: 515 DKPPERRAVLLDITCDSDGTIDHYIDGDGVATTMPMPPYDAENPPLLGFFMVGAYQEILG 574 Query: 332 NWFNGIN-MPTI-AVKNVDGTIKA 353 N N + DGT++ Sbjct: 575 NMHNLFGDTAAVDVYVFPDGTVEV 598 >gi|323966456|gb|EGB61889.1| arginine decarboxylase [Escherichia coli M863] Length = 658 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|304386759|ref|ZP_07369027.1| arginine 2-monooxygenase [Neisseria meningitidis ATCC 13091] gi|304339159|gb|EFM05245.1| arginine 2-monooxygenase [Neisseria meningitidis ATCC 13091] gi|325128780|gb|EGC51642.1| arginine decarboxylase [Neisseria meningitidis N1568] gi|325130766|gb|EGC53501.1| arginine decarboxylase [Neisseria meningitidis OX99.30304] gi|325202725|gb|ADY98179.1| arginine decarboxylase [Neisseria meningitidis M01-240149] gi|325208721|gb|ADZ04173.1| arginine decarboxylase [Neisseria meningitidis NZ-05/33] Length = 630 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + A G L+ +K + ++L G Sbjct: 59 PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118 Query: 55 TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E+M G +T YKD E + + + K + Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158 L + L I P S S+ G ++ + Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I +GGG+ + + C Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + +A + + Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322 >gi|123366942|ref|XP_001296836.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein [Trichomonas vaginalis G3] gi|121876656|gb|EAX83906.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein [Trichomonas vaginalis G3] Length = 113 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 27/65 (41%) Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 + G++C + D+ E +++GD ++ E Y + ++FNG + Sbjct: 48 ERVKTTLWGQTCDSADLVYEELLWPRLEVGDYLTIEKFGAYTYSPTSFFNGFPHHKVFHI 107 Query: 346 NVDGT 350 N + Sbjct: 108 NEEDK 112 >gi|326629123|gb|EGE35466.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 658 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 207 LEEAERLNVGPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEEH 350 >gi|326624835|gb|EGE31180.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 652 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 81 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 140 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 141 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 200 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 201 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 260 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 261 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 320 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 321 S-VNYGLNEYANNIIWAIGDACEEH 344 >gi|294634881|ref|ZP_06713403.1| arginine 2-monooxygenase [Edwardsiella tarda ATCC 23685] gi|291091754|gb|EFE24315.1| arginine 2-monooxygenase [Edwardsiella tarda ATCC 23685] Length = 638 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + + A L+ +K + ++L G Sbjct: 67 PALFCFPQILQHRLRSINAAFRRARASFGYQGDYFLVYPIKVNQQRRVIESLVNSGEPLG 126 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I L + ++ +S+++ Sbjct: 127 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKLSEIDLV 186 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158 ++AQ+L+ L + ++ + + G + ++++ Sbjct: 187 LEEAQRLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLSATQVLHLVETLRQAGHLESL 246 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 247 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 306 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 307 S-VNYGLNEYANNVIWGIGDACNEH 330 >gi|254037986|ref|ZP_04872044.1| biosynthetic arginine decarboxylase [Escherichia sp. 1_1_43] gi|226839610|gb|EEH71631.1| biosynthetic arginine decarboxylase [Escherichia sp. 1_1_43] Length = 662 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 91 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 150 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 151 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 210 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 211 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 270 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 271 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 330 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 331 S-VNYGLNEYANNIIWAIGDAC 351 >gi|218768768|ref|YP_002343280.1| arginine decarboxylase [Neisseria meningitidis Z2491] gi|48474971|sp|Q9JT25|SPEA_NEIMA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|121052776|emb|CAM09122.1| biosynthetic arginine decarboxylase [Neisseria meningitidis Z2491] gi|319411008|emb|CBY91406.1| biosynthetic arginine decarboxylase (ADC) [Neisseria meningitidis WUE 2594] Length = 630 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + A G L+ +K + ++L G Sbjct: 59 PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118 Query: 55 TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E+M G +T YKD E + + + K + Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158 L + L I P S S+ G ++ + Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I +GGG+ + + C Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + +A + + Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322 >gi|327251706|gb|EGE63392.1| arginine decarboxylase [Escherichia coli STEC_7v] Length = 632 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321 >gi|238752307|ref|ZP_04613786.1| Biosynthetic arginine decarboxylase [Yersinia rohdei ATCC 43380] gi|238709468|gb|EEQ01707.1| Biosynthetic arginine decarboxylase [Yersinia rohdei ATCC 43380] Length = 654 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 83 PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 142 Query: 55 TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E +L H N I L + ++ +S++ Sbjct: 143 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 202 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 203 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLREANSLESL 262 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 263 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 322 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 323 S-VNYGLNEYANNVIWGIGDACNEH 346 >gi|254805504|ref|YP_003083725.1| biosynthetic arginine decarboxylase [Neisseria meningitidis alpha14] gi|254669046|emb|CBA07513.1| biosynthetic arginine decarboxylase [Neisseria meningitidis alpha14] gi|325134833|gb|EGC57469.1| arginine decarboxylase [Neisseria meningitidis M13399] gi|325145005|gb|EGC67288.1| arginine decarboxylase [Neisseria meningitidis M01-240013] gi|325203572|gb|ADY99025.1| arginine decarboxylase [Neisseria meningitidis M01-240355] gi|325205532|gb|ADZ00985.1| arginine decarboxylase [Neisseria meningitidis M04-240196] Length = 630 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + A G L+ +K + ++L G Sbjct: 59 PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118 Query: 55 TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E+M G +T YKD E + + + K + Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158 L + L I P S S+ G ++ + Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I +GGG+ + + C Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + +A + + Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322 >gi|238787356|ref|ZP_04631155.1| Biosynthetic arginine decarboxylase [Yersinia frederiksenii ATCC 33641] gi|238724618|gb|EEQ16259.1| Biosynthetic arginine decarboxylase [Yersinia frederiksenii ATCC 33641] Length = 659 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 88 PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 147 Query: 55 TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E +L H N I L + ++ +S++ Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLREANSLESL 267 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351 >gi|254672566|emb|CBA06206.1| biosynthetic arginine decarboxylase [Neisseria meningitidis alpha275] gi|325136854|gb|EGC59452.1| arginine decarboxylase [Neisseria meningitidis M0579] gi|325142902|gb|EGC65264.1| arginine decarboxylase [Neisseria meningitidis 961-5945] gi|325198850|gb|ADY94306.1| arginine decarboxylase [Neisseria meningitidis G2136] Length = 630 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + A G L+ +K + ++L G Sbjct: 59 PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118 Query: 55 TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E+M G +T YKD E + + + K + Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158 L + L I P S S+ G ++ + Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I +GGG+ + + C Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + +A + + Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322 >gi|302205761|gb|ADL10103.1| Putative ornithine decarboxylase [Corynebacterium pseudotuberculosis C231] gi|308275995|gb|ADO25894.1| Putative ornithine decarboxylase [Corynebacterium pseudotuberculosis I19] Length = 452 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 55/402 (13%), Positives = 97/402 (24%), Gaps = 65/402 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQY-----MDGTTS 57 P++++ Q + L + G+ L K A L G Sbjct: 34 PFHVLYPQNFTDTARLWLDTAADTGITFGLRFGKKSNKAGCFARNLADLYAQGNNAGIDV 93 Query: 58 SSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLH 115 +S E+ GE E+ + S I + ++ + Sbjct: 94 ASTDELRAALCAGLPGEQLVVTGPTPTAELIRLASYHGSLITISRPEDIDVIAGTIYNIK 153 Query: 116 KKIGLRINPSVSYSKFILADPNRPFS---------------------------------- 141 LRI +S Sbjct: 154 PTKSLRILLRLSSDGVHTRFGMSLEQSYAVAQTLESGRYQDLPLDIAGVSFHCNGYDLDE 213 Query: 142 --RLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193 R+ K D + + + G F + + + Sbjct: 214 RIRMAHKATDAVLKLREWSSASIVSIGGGFPTSSISPELWNAVTEQLTPSMFVTGRVPGD 273 Query: 194 EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 ++ Y + LK+ + + + I EPG ++ VL E Sbjct: 274 QYPFAANCAGAEALRYILTQGTTSLKDKAISHGITILAEPGRSLCQAAGASYFPVLSCHE 333 Query: 254 NIKNLVIVDSSV------EAHVPDYLLYQESATIYPNT-----GPYTAMVCGRSCLAGDI 302 V D Y + I P + V G +CL D Sbjct: 334 LPNTEGNVTVVEGTSLSLSEQWFDSEYYPDPYLIRAGKILSQGNPTDSAVAGSTCLDSDY 393 Query: 303 FGEF--HFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPT 341 F + GD + + D AGY ++ + F+G P Sbjct: 394 LSRRFIRFPDRPQPGDILVYPDTAGYQMDSNESSFHGKEPPK 435 >gi|300858040|ref|YP_003783023.1| ornithine decarboxylase [Corynebacterium pseudotuberculosis FRC41] gi|300685494|gb|ADK28416.1| ornithine decarboxylase [Corynebacterium pseudotuberculosis FRC41] gi|302330319|gb|ADL20513.1| Putative ornithine decarboxylase [Corynebacterium pseudotuberculosis 1002] Length = 452 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 55/402 (13%), Positives = 97/402 (24%), Gaps = 65/402 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQY-----MDGTTS 57 P++++ Q + L + G+ L K A L G Sbjct: 34 PFHVLYPQNFTDTARLWLDTAADTGITFGLRFGKKSNKAGCFARNLADLYAQGNNAGIDV 93 Query: 58 SSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLH 115 +S E+ GE E+ + S I + ++ + Sbjct: 94 ASTDELRAALCAGLPGEQLVVTGPTPTAELIRLASYHGSLITISRPEDIDVIAGTIYNIK 153 Query: 116 KKIGLRINPSVSYSKFILADPNRPFS---------------------------------- 141 LRI +S Sbjct: 154 PTKSLRILLRLSSDGVHTRFGMSLEQSYAVAQTLESGRYQDLPLDIAGVSFHCNGYDLDE 213 Query: 142 --RLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193 R+ K D + + + G F + + + Sbjct: 214 RIRMAHKATDAVLKLREWSSASIVSIGGGFPTSSISPELWNAVTEQLTPSMFVTGRVPGD 273 Query: 194 EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 ++ Y + LK+ + + + I EPG ++ VL E Sbjct: 274 QYPFAANCAGAEALRYILTQGTTSLKDKAISHGITILAEPGRSLCQAAGASYFPVLSCHE 333 Query: 254 NIKNLVIVDSSV------EAHVPDYLLYQESATIYPNT-----GPYTAMVCGRSCLAGDI 302 V D Y + I P + V G +CL D Sbjct: 334 LPNTEGNVTVVEGTSLSLSEQWFDSEYYPDPYLIRAGKILSQGNPTDSAVAGSTCLDSDY 393 Query: 303 FGEF--HFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPT 341 F + GD + + D AGY ++ + F+G P Sbjct: 394 LSRRFIRFPDRPQPGDILVYPDTAGYQMDSNESSFHGKEPPK 435 >gi|189424734|ref|YP_001951911.1| arginine decarboxylase [Geobacter lovleyi SZ] gi|226732567|sp|B3EAF3|SPEA_GEOLS RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|189420993|gb|ACD95391.1| arginine decarboxylase [Geobacter lovleyi SZ] Length = 635 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 83/299 (27%), Gaps = 48/299 (16%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + + + +NA + +K + + + Y G S Sbjct: 67 DVLQGRIASINRVFRNAIAENDYPAKYQTFYPIKVNQQRQVVEAIASYGKRYNIGLEVGS 126 Query: 60 LYEVMLGHEKFGGE-THAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E++ G G YKD E + TI+ + +L K + A+ Sbjct: 127 KPELVAGIAISTGNGLPIICNGYKDAEYIETVLFATRVGYNITIVVEKLFELEKIIELAK 186 Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEIK--------NVNGLMF 163 K + L I +S ++ G + + + + VN L Sbjct: 187 KTGIRPSLGIRVKLSSKGTGKWATSGGEDAKFGLRMSEIMAAIKMLQEADLLDCVNLLHS 246 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207 H + I E I+++ +GGG+ Sbjct: 247 HIGSQVTKIDKIKTALIEAARIYSEMRKLGVNIQYLDIGGGLGVDYDGSKSSYFSSVNYT 306 Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 V + + + + I E G A V + + L T VL+ + Sbjct: 307 VEEYANDVIYQIKNICDEAGVDCPNIISESGRATVAHYSVLVTNVLNTNTQNLMPDYEQ 365 >gi|189459864|ref|ZP_03008649.1| hypothetical protein BACCOP_00494 [Bacteroides coprocola DSM 17136] gi|189433474|gb|EDV02459.1| hypothetical protein BACCOP_00494 [Bacteroides coprocola DSM 17136] Length = 630 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 91/313 (29%), Gaps = 49/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIR----KNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ + G + ++ +K + + + + Sbjct: 59 PMLVRFPDILDNRIEKISNCFTLASEEYGYQAQNFIIYPIKVNQMRPVVEEIISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ ++ YKD + ++ +++L Sbjct: 119 LGLEAGSKPELHAVIAINTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKLNELR 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156 A++L+ + + I ++ S + + S+ G + +E+ Sbjct: 179 LIAKIAKQLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFIEKKEMKD 238 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + + + +E++ +GGG+ Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHQLGFPVEFVDIGGGLGVDYDGTRSSY 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G ++ + + L VL+ + Sbjct: 299 SESSVNYSIQEYVNDSISIMVDASNKNNIPHPNIITESGRSLTAHHSVLIFEVLETASLP 358 Query: 256 KNLVIVDSSVEAH 268 + + S E H Sbjct: 359 EMEEEFEVSPEDH 371 >gi|157148490|ref|YP_001455809.1| arginine decarboxylase [Citrobacter koseri ATCC BAA-895] gi|157085695|gb|ABV15373.1| hypothetical protein CKO_04316 [Citrobacter koseri ATCC BAA-895] Length = 637 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 66 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 186 LDEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 245 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329 >gi|59801825|ref|YP_208537.1| arginine decarboxylase [Neisseria gonorrhoeae FA 1090] gi|194099290|ref|YP_002002384.1| arginine decarboxylase [Neisseria gonorrhoeae NCCP11945] gi|239999556|ref|ZP_04719480.1| arginine decarboxylase [Neisseria gonorrhoeae 35/02] gi|240014732|ref|ZP_04721645.1| arginine decarboxylase [Neisseria gonorrhoeae DGI18] gi|240017180|ref|ZP_04723720.1| arginine decarboxylase [Neisseria gonorrhoeae FA6140] gi|240081181|ref|ZP_04725724.1| arginine decarboxylase [Neisseria gonorrhoeae FA19] gi|240113394|ref|ZP_04727884.1| arginine decarboxylase [Neisseria gonorrhoeae MS11] gi|240116258|ref|ZP_04730320.1| arginine decarboxylase [Neisseria gonorrhoeae PID18] gi|240118544|ref|ZP_04732606.1| arginine decarboxylase [Neisseria gonorrhoeae PID1] gi|240121255|ref|ZP_04734217.1| arginine decarboxylase [Neisseria gonorrhoeae PID24-1] gi|240124090|ref|ZP_04737046.1| arginine decarboxylase [Neisseria gonorrhoeae PID332] gi|240126293|ref|ZP_04739179.1| arginine decarboxylase [Neisseria gonorrhoeae SK-92-679] gi|240128755|ref|ZP_04741416.1| arginine decarboxylase [Neisseria gonorrhoeae SK-93-1035] gi|254494273|ref|ZP_05107444.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae 1291] gi|260439927|ref|ZP_05793743.1| arginine decarboxylase [Neisseria gonorrhoeae DGI2] gi|268595368|ref|ZP_06129535.1| arginine decarboxylase [Neisseria gonorrhoeae 35/02] gi|268597293|ref|ZP_06131460.1| arginine decarboxylase [Neisseria gonorrhoeae FA19] gi|268599467|ref|ZP_06133634.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae MS11] gi|268601923|ref|ZP_06136090.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae PID18] gi|268604254|ref|ZP_06138421.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae PID1] gi|268682713|ref|ZP_06149575.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae PID332] gi|268684877|ref|ZP_06151739.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae SK-92-679] gi|268687140|ref|ZP_06154002.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae SK-93-1035] gi|291043205|ref|ZP_06568928.1| arginine decarboxylase [Neisseria gonorrhoeae DGI2] gi|293398534|ref|ZP_06642712.1| arginine decarboxylase [Neisseria gonorrhoeae F62] gi|59718720|gb|AAW90125.1| putative arginine decarboxylase [Neisseria gonorrhoeae FA 1090] gi|193934580|gb|ACF30404.1| arginine decarboxylase [Neisseria gonorrhoeae NCCP11945] gi|226513313|gb|EEH62658.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae 1291] gi|268548757|gb|EEZ44175.1| arginine decarboxylase [Neisseria gonorrhoeae 35/02] gi|268551081|gb|EEZ46100.1| arginine decarboxylase [Neisseria gonorrhoeae FA19] gi|268583598|gb|EEZ48274.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae MS11] gi|268586054|gb|EEZ50730.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae PID18] gi|268588385|gb|EEZ53061.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae PID1] gi|268622997|gb|EEZ55397.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae PID332] gi|268625161|gb|EEZ57561.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae SK-92-679] gi|268627424|gb|EEZ59824.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae SK-93-1035] gi|291012811|gb|EFE04794.1| arginine decarboxylase [Neisseria gonorrhoeae DGI2] gi|291611005|gb|EFF40102.1| arginine decarboxylase [Neisseria gonorrhoeae F62] gi|317164804|gb|ADV08345.1| arginine decarboxylase [Neisseria gonorrhoeae TCDC-NG08107] Length = 630 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + A G L+ +K + ++L G Sbjct: 59 PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118 Query: 55 TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E+M G +T YKD E + + + K + Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158 L + L I P S S+ G ++ + Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I +GGG+ + + C Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + +A + + Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322 >gi|267995251|gb|ACY90136.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|323131443|gb|ADX18873.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989953|gb|AEF08936.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 658 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEEH 350 >gi|253699938|ref|YP_003021127.1| arginine decarboxylase [Geobacter sp. M21] gi|259511346|sp|C6E3V4|SPEA_GEOSM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|251774788|gb|ACT17369.1| arginine decarboxylase [Geobacter sp. M21] Length = 635 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 88/297 (29%), Gaps = 38/297 (12%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + + + KNA + +K + + + + G S Sbjct: 67 NILEGRIASISRVFKNAISDNNYPAKYQTFYPIKVNQQRQVVEAIANFGKKYNIGLEVGS 126 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E++ G YKD E + TI+ + +L K + ++ Sbjct: 127 KPELVAAISMSTGNNLPILCNGYKDTEFIETVLFATRVGYDITIVVEKLFELEKIVEVSK 186 Query: 113 KLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIESEIK--------NVNGLMF 163 + L I +S + ++ G + + I + +V L F Sbjct: 187 RTGIVPKLGIRVKLSSKGIGKWSTSGGDDAKFGLRISELIAAIEMLKQNDMLDSVKLLHF 246 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + L + + +E++ +GGG+ + + Sbjct: 247 HVGSQITKIDKIKNALIEGTRIYAEMRKLGVNLEFLDIGGGLGVDYDG-SKSSYFSSVNY 305 Query: 221 FSEKYSVQIYLEPGEAI------VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD 271 E+Y+ + + N + + ++ +++++ + +PD Sbjct: 306 SLEEYANDVIYQVKNICDDAGVPCPNIISESGRATVAHYSVLVTDVLNNNTQTLMPD 362 >gi|307132688|ref|YP_003884704.1| biosynthetic arginine decarboxylase, PLP-binding protein [Dickeya dadantii 3937] gi|306530217|gb|ADN00148.1| biosynthetic arginine decarboxylase, PLP-binding protein [Dickeya dadantii 3937] Length = 658 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 79/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A G L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLINSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M LGH N I L + ++ +S++N Sbjct: 147 LEAGSKAELMAVLGHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEINMV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVELLRKANRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEY 350 >gi|254670605|emb|CBA06562.1| biosynthetic arginine decarboxylase [Neisseria meningitidis alpha153] gi|261391981|emb|CAX49445.1| biosynthetic arginine decarboxylase (ADC) [Neisseria meningitidis 8013] Length = 630 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + A G L+ +K + ++L G Sbjct: 59 PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118 Query: 55 TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E+M G +T YKD E + + + K + Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158 L + L I P S S+ G ++ + Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I +GGG+ + + C Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + +A + + Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322 >gi|119510057|ref|ZP_01629197.1| arginine decarboxylase [Nodularia spumigena CCY9414] gi|119465244|gb|EAW46141.1| arginine decarboxylase [Nodularia spumigena CCY9414] Length = 671 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 48/288 (16%) Query: 12 QKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + ++ A + + +KC + + L ++ G + S Sbjct: 108 DILEDRIERLNACFNKAIARYNYPGVYRGVFPVKCNQERHLIEDLVKFGKPHQFGLEAGS 167 Query: 60 LYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------AQ 112 E+M+ YKD E + ++ + + ++ + Sbjct: 168 KPELMIALALLDTPGALLICNGYKDREYVETAMLAQRLGQTSIIVIEQIEEVDLVIAAHR 227 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMF 163 +L K L + +S + + G + + + + + F Sbjct: 228 QLGIKPILGVRAKLSTQGMGRWGTSTGDRAKFGLTIPEIMGAVNKLREANLLDCLQLMHF 287 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYP 210 H + I E ++++ +GGG+ K+Y Sbjct: 288 HIGSQISAINVIKDAIQEASRIYVELAMLGADMKYLDVGGGLGVDYDGSQTNFYASKNYN 347 Query: 211 VKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251 ++++ + + + E G AI ++ + L VL Sbjct: 348 MQNYANDIVAELKDTCAERQIPVPTLISESGRAIASHQSVLIFDVLST 395 >gi|327412922|emb|CAX67936.1| biosynthetic arginine decarboxylase [Salmonella bongori] Length = 658 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEEH 350 >gi|312887815|ref|ZP_07747402.1| Orn/DAP/Arg decarboxylase 2 [Mucilaginibacter paludis DSM 18603] gi|311299634|gb|EFQ76716.1| Orn/DAP/Arg decarboxylase 2 [Mucilaginibacter paludis DSM 18603] Length = 464 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 47/393 (11%), Positives = 107/393 (27%), Gaps = 59/393 (15%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV--MLGHEK 69 + NN K K + + + +SS +++ + EK Sbjct: 66 AIIKNNYR--------GTYKYCYCTKSSHFKHIVEEALKNEIHLETSSAFDMPMIDALEK 117 Query: 70 ---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ------LNKFKDKAQKLHKKIGL 120 E +K + + + F+ + D ++ L Sbjct: 118 KGLLNKEMTVICNGFKTFQYKQYIIDMLHDGFSNIIPVLDNKEEFNIYDDEVEMSTPCNL 177 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGLMFHNNCENKSFLCFS 176 I + +R R+ + ++ V L F N + Sbjct: 178 GIRIAAEEQPDSQFYTSRLGVRIEDVIDFYYNKIEKNPNFRVKLLHFFINSGISDTPYYW 237 Query: 177 AMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSE 223 L+ +F ++ + +GGG+ + + + + + Sbjct: 238 NELEKYVTLYCKFKKINPDLDTLDIGGGMPFKDSLVFDFDYEYMVNEIVSRIKEICAEHD 297 Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLL----YQE 277 I E G+ V + + VL + +++D S ++PD Y Sbjct: 298 VMEPDIITEFGKYTVAEASGILYKVLGRKQQNDRERWLMLDGSFITNLPDVWALNQKYVL 357 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEF-----HFEKPVKIGDRISFEDVAGYNINRKN 332 ++ + G +C D + + F + + F Y + Sbjct: 358 LPINNWDSEYERVNLGGITCDGQDYYNQEAHMNSVFMPKTRKVQYVGFFHTGAYQEVL-S 416 Query: 333 WFNGI-----NMPTIAVKNVDGTIKAIREFSYN 360 + GI P + + R+ ++N Sbjct: 417 GYGGIHHCLLPSPKHVIIRRN------RDETFN 443 >gi|207858348|ref|YP_002244999.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206710151|emb|CAR34507.1| Biosynthetic arginine decarboxylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 637 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 66 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 186 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 245 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329 >gi|197363954|ref|YP_002143591.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197095431|emb|CAR60990.1| biosynthetic arginine decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 637 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 66 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 186 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 245 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329 >gi|161506362|ref|YP_001573474.1| arginine decarboxylase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867709|gb|ABX24332.1| hypothetical protein SARI_04559 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 637 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 66 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 186 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 245 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329 >gi|62181596|ref|YP_218013.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161616049|ref|YP_001590014.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553208|ref|ZP_02346958.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168234364|ref|ZP_02659422.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236154|ref|ZP_02661212.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242888|ref|ZP_02667820.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168463728|ref|ZP_02697645.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819885|ref|ZP_02831885.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194442484|ref|YP_002042345.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450533|ref|YP_002047074.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471977|ref|ZP_03077961.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735932|ref|YP_002116034.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250362|ref|YP_002148000.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265854|ref|ZP_03165928.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200388377|ref|ZP_03214989.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928011|ref|ZP_03219211.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213424118|ref|ZP_03357011.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213614407|ref|ZP_03371233.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648499|ref|ZP_03378552.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213863213|ref|ZP_03386468.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238909886|ref|ZP_04653723.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289828641|ref|ZP_06546451.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|75480949|sp|Q57K30|SPEA_SALCH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|189046765|sp|A9N4N1|SPEA_SALPB RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|226732570|sp|B5F5L1|SPEA_SALA4 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|226732572|sp|B4THH1|SPEA_SALHS RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|226734330|sp|B4T5J3|SPEA_SALNS RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|226734332|sp|B4TV55|SPEA_SALSV RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|62129229|gb|AAX66932.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161365413|gb|ABX69181.1| hypothetical protein SPAB_03850 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401147|gb|ACF61369.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408837|gb|ACF69056.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458341|gb|EDX47180.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711434|gb|ACF90655.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633388|gb|EDX51802.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197214065|gb|ACH51462.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197244109|gb|EDY26729.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290926|gb|EDY30280.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199605475|gb|EDZ04020.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322333|gb|EDZ07530.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205322284|gb|EDZ10123.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205331694|gb|EDZ18458.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338186|gb|EDZ24950.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343399|gb|EDZ30163.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|312914109|dbj|BAJ38083.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|322613484|gb|EFY10425.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621076|gb|EFY17934.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624140|gb|EFY20974.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628121|gb|EFY24910.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633240|gb|EFY29982.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636182|gb|EFY32890.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639520|gb|EFY36208.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647547|gb|EFY44036.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648731|gb|EFY45178.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653786|gb|EFY50112.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657892|gb|EFY54160.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663995|gb|EFY60194.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668994|gb|EFY65145.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673012|gb|EFY69119.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677997|gb|EFY74060.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681173|gb|EFY77206.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687897|gb|EFY83864.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716079|gb|EFZ07650.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323194907|gb|EFZ80094.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196658|gb|EFZ81806.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202642|gb|EFZ87682.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207871|gb|EFZ92817.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212577|gb|EFZ97394.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214940|gb|EFZ99688.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222670|gb|EGA07035.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225413|gb|EGA09645.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230572|gb|EGA14690.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235077|gb|EGA19163.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239116|gb|EGA23166.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244526|gb|EGA28532.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247141|gb|EGA31107.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253376|gb|EGA37205.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256317|gb|EGA40053.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262507|gb|EGA46063.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267397|gb|EGA50881.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269199|gb|EGA52654.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 632 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 301 S-VNYGLNEYANNIIWAIGDACEEH 324 >gi|85059996|ref|YP_455698.1| arginine decarboxylase [Sodalis glossinidius str. 'morsitans'] gi|84780516|dbj|BAE75293.1| biosynthetic arginine decarboxylase [Sodalis glossinidius str. 'morsitans'] Length = 640 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 84/308 (27%), Gaps = 48/308 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + + A G L+ +K + ++L G Sbjct: 69 PALFCFPQILQHRLRSINAAFQRARDSFGYQGGYFLVYPIKVNQHRRVIESLVNSGEPLG 128 Query: 55 TTSSSLYEVML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 + S E+M H N YKD E + + I + K + Sbjct: 129 LEAGSKAELMAVIAHAGMTRTVIVCN-GYKDREYIRLALIGEKIGHKVYLVIEKLSEITL 187 Query: 113 KLHKKIGLRINPSVSYSK-------FILADPNRPFSRLGEKCKDKIESEI--------KN 157 L + L + P + S+ G ++ + Sbjct: 188 VLEEAERLNVVPRLGVRTRLASQGSGKWQSSGGEKSKFGLAAAQVLQLVDLLRAKGRLDS 247 Query: 158 VNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------- 207 + L FH + + E +IE +GGG+ + Sbjct: 248 LQLLHFHLGSQLSNIRDIASGVRESARFYVELHKLGVRIECFDVGGGLGVDYEGTRSQSD 307 Query: 208 ---DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKN 257 +Y + ++ + + E G A+ + T L + V+ + N + Sbjct: 308 GSANYGLNEYANNVIWGIGDACNEYGLPHPTVITESGRAVTAHHTVLVSNVIGVERNEFS 367 Query: 258 LVIVDSSV 265 + Sbjct: 368 EPHPPEAD 375 >gi|330996866|ref|ZP_08320735.1| arginine 2-monooxygenase [Paraprevotella xylaniphila YIT 11841] gi|329572309|gb|EGG53968.1| arginine 2-monooxygenase [Paraprevotella xylaniphila YIT 11841] Length = 630 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 79/268 (29%), Gaps = 31/268 (11%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ K K ++ +K + + + + Sbjct: 59 PVLVRFPDILDNRIEKTSNCFEKAAKEYDYKGENFIIYPIKVNQIRPVVEEVISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ + YKD + ++ +++LN Sbjct: 119 LGLEAGSKPELHAVIAVNTDSASPIICNGYKDHNYIELALLAQKMGKRIFLVVEKLNELN 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156 + AQKL+ + + I ++ S + + S+ G + +E+ Sbjct: 179 TIYEVAQKLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDMLEAKGMKD 238 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + L+ + H +E++ GGG+ + Sbjct: 239 CLKLIHFHIGSQITKIRRIQTALREASQFYIQLHHLGYDVEFVDCGGGLGVDYDGTRSSN 298 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 + ++Y +A N Sbjct: 299 SESSVNYSIQEYVNDCIYTFVDAANKNN 326 >gi|282881177|ref|ZP_06289864.1| arginine 2-monooxygenase [Prevotella timonensis CRIS 5C-B1] gi|281304981|gb|EFA97054.1| arginine 2-monooxygenase [Prevotella timonensis CRIS 5C-B1] Length = 630 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 25/256 (9%), Positives = 70/256 (27%), Gaps = 28/256 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 ++D ++ K ++ +K + + + + G + S Sbjct: 67 ILD-NRIEKTASCFEQASKEYNYTGQNFIIYPIKVNQMQPVVEEIISHGQKFNLGLEAGS 125 Query: 60 LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + I+ +++L+ A+ Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQNYIELALLAQKMGKRIFIVIEKLNELDIIAKAAK 185 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163 K+ + + I ++ S + S+ G + + + ++ + F Sbjct: 186 KIGVRPNIGIRIKLASSGSGKWAESGGDASKFGLNSSELLLALKMLEEKGLKDCLHLIHF 245 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 H + ++++ GGG+ + + Sbjct: 246 HIGSQITKIRRIQTALREAAQYYINLHKMGYPVDFVDCGGGLGVDYDGTRSSNSESSVNY 305 Query: 221 FSEKYSVQIYLEPGEA 236 ++Y EA Sbjct: 306 SIQEYVNDCIYTFVEA 321 >gi|213420077|ref|ZP_03353143.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 404 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I +A + Sbjct: 301 S-VNYGLNEYANNIIWAISDACEEH 324 >gi|307640137|gb|ADN83826.1| diaminopimelate decarboxylase-like protein [Brachionus plicatilis] gi|307640139|gb|ADN83827.1| diaminopimelate decarboxylase-like protein [Brachionus plicatilis] Length = 142 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 27/54 (50%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341 + + + G +C D+ + + ++ + + F+D+ Y I+ FNGI +P Sbjct: 28 FKSSIWGPTCDGLDLVCKEIYVPELETNEFMVFKDMGAYTISGAVAFNGIPLPK 81 >gi|288933590|ref|YP_003437649.1| arginine decarboxylase [Klebsiella variicola At-22] gi|290511343|ref|ZP_06550712.1| arginine decarboxylase [Klebsiella sp. 1_1_55] gi|288888319|gb|ADC56637.1| arginine decarboxylase [Klebsiella variicola At-22] gi|289776336|gb|EFD84335.1| arginine decarboxylase [Klebsiella sp. 1_1_55] Length = 658 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALVGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158 ++A++L+ L + ++ + + G ++ ++++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEILRAAGHLESL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|205354010|ref|YP_002227811.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273791|emb|CAR38786.1| Biosynthetic arginine decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Length = 637 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 66 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 186 LEEAERLNVGPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 245 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329 >gi|168264469|ref|ZP_02686442.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205347081|gb|EDZ33712.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 632 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 301 S-VNYGLNEYANNIIWAIGDACEEH 324 >gi|152971892|ref|YP_001337001.1| arginine decarboxylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956741|gb|ABR78771.1| arginine decarboxylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 658 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALVGEKMGHKVYLVIEKMSEIAIV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158 ++A++L+ L + ++ + + G ++ ++++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEILREAGHLESL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347 >gi|327395094|dbj|BAK12516.1| biosynthetic arginine decarboxylase SpeA [Pantoea ananatis AJ13355] Length = 659 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 36/274 (13%), Positives = 78/274 (28%), Gaps = 31/274 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYTGDYFLVYPIKVNQHKRVIESLVNSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 147 LEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKIGHKVYLVLEKMTEVRMV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158 ++A++L+ L I ++ + + G ++ + Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRIDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIKCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL 249 + +Y+ + G A + TV+ Sbjct: 327 S-VNYGLNEYANNVIWGIG-AACDEHGLEHPTVI 358 >gi|167990388|ref|ZP_02571488.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331225|gb|EDZ17989.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] Length = 632 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 301 S-VNYGLNEYANNIIWAIGDACEEH 324 >gi|198244380|ref|YP_002217062.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|226732571|sp|B5FUJ7|SPEA_SALDC RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|197938896|gb|ACH76229.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 632 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 301 S-VNYGLNEYANNIIWAIGDACEEH 324 >gi|261248218|emb|CBG26055.1| ADC [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301159642|emb|CBW19161.1| Biosynthetic arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 637 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 66 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 186 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 245 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329 >gi|262042589|ref|ZP_06015745.1| arginine 2-monooxygenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|329998564|ref|ZP_08303161.1| arginine 2-monooxygenase [Klebsiella sp. MS 92-3] gi|259040023|gb|EEW41138.1| arginine 2-monooxygenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328538635|gb|EGF64734.1| arginine 2-monooxygenase [Klebsiella sp. MS 92-3] Length = 637 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 66 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALVGEKMGHKVYLVIEKMSEIAIV 185 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158 ++A++L+ L + ++ + + G ++ ++++ Sbjct: 186 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEILREAGHLESL 245 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 306 S-VNYGLNEYANNIIWAIGDAC 326 >gi|271502137|ref|YP_003335163.1| arginine decarboxylase [Dickeya dadantii Ech586] gi|270345692|gb|ACZ78457.1| arginine decarboxylase [Dickeya dadantii Ech586] Length = 658 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 30/263 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A G L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLINSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M LGH N I L + ++ +S++ Sbjct: 147 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKLV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVELLRNANRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ + G+A Sbjct: 327 S-VNYGLNEYANNVIWGIGDACN 348 >gi|206579063|ref|YP_002236610.1| arginine decarboxylase [Klebsiella pneumoniae 342] gi|226732568|sp|B5XUB1|SPEA_KLEP3 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|206568121|gb|ACI09897.1| arginine decarboxylase [Klebsiella pneumoniae 342] Length = 632 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALVGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158 ++A++L+ L + ++ + + G ++ ++++ Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEILRAAGHLESL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321 >gi|332880970|ref|ZP_08448640.1| arginine 2-monooxygenase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681144|gb|EGJ54071.1| arginine 2-monooxygenase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 630 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 79/268 (29%), Gaps = 31/268 (11%) Query: 5 PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ K K ++ +K + + + + Sbjct: 59 PVLVRFPDILDNRIEKTSNCFEKAAKEYDYKGENFIIYPIKVNQIRPVVEEVISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ + YKD + ++ +++LN Sbjct: 119 LGLEAGSKPELHAVIAVNTDSASPIICNGYKDHNYIELALLAQKMGKRIFLVVEKLNELN 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156 + AQKL+ + + I ++ S + + S+ G + +E+ Sbjct: 179 TIYEVAQKLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDMLEAKGMKD 238 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + L+ + H +E++ GGG+ + Sbjct: 239 CLKLIHFHIGSQITKIRRIQTALREASQFYIQLHHLGYDVEFVDCGGGLGVDYDGTRSSN 298 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 + ++Y +A N Sbjct: 299 SESSVNYSIQEYVNDCIYTFVDAANKNN 326 >gi|251788148|ref|YP_003002869.1| arginine decarboxylase [Dickeya zeae Ech1591] gi|247536769|gb|ACT05390.1| arginine decarboxylase [Dickeya zeae Ech1591] Length = 658 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 30/263 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A G L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLINSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M LGH N I L + ++ +S++ Sbjct: 147 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKLV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVELLRNANRLDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ + G+A Sbjct: 327 S-VNYGLNEYANNVIWGIGDACN 348 >gi|121999190|ref|YP_001003977.1| arginine decarboxylase [Halorhodospira halophila SL1] gi|121590595|gb|ABM63175.1| arginine decarboxylase [Halorhodospira halophila SL1] Length = 626 Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 35/293 (11%), Positives = 76/293 (25%), Gaps = 45/293 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P + L + +D A + + +K + + + G Sbjct: 61 PVLIRFPAILRDRVDALCDAFGAAMAEADYRGAYQPVYPIKVNQQRSVIEEIVGDGRRVG 120 Query: 55 TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVL------SNCDTIIFNTVSQLNKFK 108 + S E+M YKD E + ++ S+ Sbjct: 121 LEAGSKPELMAVLALAPTGGTVICNGYKDPEYVRLALRGLQLGLQVHLVLEKRSEARMII 180 Query: 109 DKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNVN 159 +A++L L + ++ + G D + ++ + Sbjct: 181 REARRLGVAPRLGLRVRLASMGAGKWQNTGGERSKFGLTAADALAVVEELREADLLERLE 240 Query: 160 GLMFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------- 207 L FH + + + E + + +GGG+ + Sbjct: 241 LLHFHLGSQIANVHDIRAGLSEGARFYTELRRLGAPVSKVDVGGGLGVDYEGTRSRAFCS 300 Query: 208 -----DYPVKDFCQRLKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDIS 252 + LK ++ + E G A+ + L T V+D Sbjct: 301 MNYSIAEYAHNVVAALKAVCDEAGLPHPTLITESGRAMTAHHAVLVTPVIDTD 353 >gi|332709030|ref|ZP_08429000.1| arginine decarboxylase [Lyngbya majuscula 3L] gi|332352219|gb|EGJ31789.1| arginine decarboxylase [Lyngbya majuscula 3L] Length = 715 Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 98/314 (31%), Gaps = 49/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + + A + + +KC + + + + Sbjct: 125 PLLIHFSDILADQIAQLNACFAQAITRYKYPGRYQGVFPVKCNQHRHVVEDVVYFGQPYQ 184 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------ 105 G S E+M+ ++ YKD E + N + L Sbjct: 185 FGLEVGSKPELMIALATLLTPDSLIICNGYKDREYLETALLARRLGHNPIIVLEQLEEVQ 244 Query: 106 -KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK------- 156 + A+ L + +S + + G K + +++ + Sbjct: 245 LIIEVAAELGGITPVLGVRAKLSTQSMGRWGNSVGDRAKFGLKIPEILQTIDQLREAGML 304 Query: 157 -NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD------ 206 ++ L FH + + ++ + + ++++ +GGG+ Sbjct: 305 ESLQLLHFHIGSQISAISAIKDAIREASQIYAELKGLGVNMQYLDVGGGLAVDYDGSKTN 364 Query: 207 ----KDYPVKDFC----QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENI 255 K+Y ++++ +KE E++ + + E G AI ++ + L VL S+ Sbjct: 365 FHASKNYNMQNYANDIVAAVKEACEEHQIPAPTLISESGRAIASHQSVLIFDVLSTSDVE 424 Query: 256 KNLVIVDSSVEAHV 269 + + + + Sbjct: 425 SQSPPLATEQDHLI 438 >gi|238896471|ref|YP_002921209.1| arginine decarboxylase [Klebsiella pneumoniae NTUH-K2044] gi|238548791|dbj|BAH65142.1| arginine decarboxylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 662 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 91 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 150 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 151 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALVGEKMGHKVYLVIEKMSEIAIV 210 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158 ++A++L+ L + ++ + + G ++ ++++ Sbjct: 211 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEILREAGHLESL 270 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 271 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 330 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 331 S-VNYGLNEYANNIIWAIGDAC 351 >gi|37527545|ref|NP_930889.1| arginine decarboxylase [Photorhabdus luminescens subsp. laumondii TTO1] gi|48474343|sp|Q7N121|SPEA_PHOLL RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|36786980|emb|CAE16054.1| biosynthetic arginine decarboxylase (ADC) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 634 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 75/263 (28%), Gaps = 32/263 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 63 PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQQRRVIESLASSGEPLG 122 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 + S E+M L H N YKD E + + + + K + AQ Sbjct: 123 LEAGSKAELMAVLAHAGMTRTVIVCN-GYKDREYIRLALIGEKLGHKVYLVIEKMSEIAQ 181 Query: 113 KLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKN 157 L + L + P S S+ G ++ + + Sbjct: 182 VLEEAERLNVIPRLGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLVETLRAVDRLDS 241 Query: 158 VNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF 214 + L FH + + E I+ +GGG+ + + Sbjct: 242 LQLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSD 301 Query: 215 CQRLKEFSEKYSVQIYLEPGEAI 237 C + +Y+ + G+A Sbjct: 302 CS-VNYGLNEYANNVIWGIGDAC 323 >gi|291618762|ref|YP_003521504.1| SpeA [Pantoea ananatis LMG 20103] gi|291153792|gb|ADD78376.1| SpeA [Pantoea ananatis LMG 20103] Length = 663 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 36/274 (13%), Positives = 78/274 (28%), Gaps = 31/274 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 91 PALFCFPQILQHRLRSINAAFKRARESYGYTGDYFLVYPIKVNQHKRVIESLVNSGEPLG 150 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 151 LEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKIGHKVYLVLEKMTEVRMV 210 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158 ++A++L+ L I ++ + + G ++ + Sbjct: 211 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRIDSL 270 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 271 QLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIKCFDVGGGLGVDYEGTRSQSDC 330 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL 249 + +Y+ + G A + TV+ Sbjct: 331 S-VNYGLNEYANNVIWGIG-AACDEHGLEHPTVI 362 >gi|254521053|ref|ZP_05133108.1| arginine decarboxylase [Stenotrophomonas sp. SKA14] gi|219718644|gb|EED37169.1| arginine decarboxylase [Stenotrophomonas sp. SKA14] Length = 629 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 98/332 (29%), Gaps = 46/332 (13%) Query: 29 GVKLLLALKCFAAWGMFDTLNQY---MDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCE 85 G + +K G+ TL + G + S E+M YKD E Sbjct: 92 GYTAVYPIKVNQHRGVAGTLASHHGEGFGLEAGSKPELMAVLALSRPGGLIVCNGYKDRE 151 Query: 86 IDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139 + I+ S+L ++++ L K GL + ++ + Sbjct: 152 YIRLALIGRKLGLQTFIVIEKPSELKLVLEESKALDVKPGLGVRMRLASLGAGKWQNSGG 211 Query: 140 FS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---G 187 + G + ++ ++ L FH + + + ++ + F Sbjct: 212 DKAKFGLSPRQLLDLWKSLRDTEYADCLSLLHFHMGSQISNVRDIANGMREATRYFVELS 271 Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDFCQR--------------LKEFSEKY---SVQIY 230 +I + +GGG+ + + FC L E++ +I Sbjct: 272 QLGAKITHVDVGGGLGVDYEGTRSRSFCSINYGLNSYASNIVQPLANACEEHGLTPPRIV 331 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE----AHVPDYL-LYQESATIYPNT 285 E G A+ + L V ++ + + V E H+ + + Sbjct: 332 TECGRAMTAHHAVLIANVSEVEQAQEGRVPDQHDDEPAAIRHLREIHEELDTRPAVELFQ 391 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 G LA G+ + +I D Sbjct: 392 EAQHFHAEG---LASYALGQIDLPQRARIDDL 420 >gi|198274366|ref|ZP_03206898.1| hypothetical protein BACPLE_00511 [Bacteroides plebeius DSM 17135] gi|198272732|gb|EDY97001.1| hypothetical protein BACPLE_00511 [Bacteroides plebeius DSM 17135] Length = 630 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 91/313 (29%), Gaps = 49/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIR----KNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52 P + L N ++ + G + ++ +K + + + + Sbjct: 59 PMLVRFPDILDNRIEKISNCFTQASEEYGYQAQNFIIYPIKVNQMRPVVEEIISHGKKFN 118 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ ++ YKD + ++ +++L Sbjct: 119 LGLEAGSKPELHAVIAINTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKLNELR 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IK 156 A++L+ + + I ++ S + + S+ G + +E+ Sbjct: 179 LIAKMAKQLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLEKKEMQD 238 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + FH + + + +E++ +GGG+ + Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHQLGFPVEFVDIGGGLGVDYDGTRSAN 298 Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + ++Y I E G ++ + + L VL+ + Sbjct: 299 SESSVNYSIQEYVNDSISIMVDASNKNNIPHPNIITESGRSLTAHHSVLIFEVLETASLP 358 Query: 256 KNLVIVDSSVEAH 268 + S + H Sbjct: 359 SMDEDFEVSADDH 371 >gi|317049417|ref|YP_004117065.1| arginine decarboxylase [Pantoea sp. At-9b] gi|316951034|gb|ADU70509.1| arginine decarboxylase [Pantoea sp. At-9b] Length = 658 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 77/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLD----TALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L R++ G K L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINGAFKRARESYGYKGDYFLVYPIKVNQHKRVIESLVNSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I L + ++ ++++ Sbjct: 147 LEAGSKAELMAVLAHAGKTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMTEVRMV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158 ++A++L+ L I ++ + + G ++ + Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLAASQVLQLVEIMRKAGRIESL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIKCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ + G+A Sbjct: 327 S-VNYGLNEYANNVIWAIGDAC 347 >gi|16329179|ref|NP_439907.1| arginine decarboxylase [Synechocystis sp. PCC 6803] gi|15214305|sp|P72587|SPEA2_SYNY3 RecName: Full=Biosynthetic arginine decarboxylase 2; Short=ADC 2 gi|1651659|dbj|BAA16587.1| arginine decarboxylase [Synechocystis sp. PCC 6803] Length = 659 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 102/345 (29%), Gaps = 59/345 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM---- 52 P + L + L+ A + + +KC + + L ++ Sbjct: 79 PLLIRFSDILADRLERLNSCFAKAIARYNYPNTYQAVYPVKCNQQRHLVEALVRFGQTSQ 138 Query: 53 DGTTSSSLYEVMLGHEKFGG---------ETHAYNVAYKDCEIDAVL------SNCDTII 97 G + S E+M+ + YKD + + II Sbjct: 139 CGLEAGSKPELMIALATLPPPLDRQDKHTKPLIICNGYKDQDYLETALLAKRLGHRPIII 198 Query: 98 FNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKF---ILADPNRPFSRLGEKCKDKIESE 154 + +L +Q+L+ K L + +S ++ N ++LG D + Sbjct: 199 IEQLRELEWVLHISQQLNIKPMLGVRARLSCQSLKSSEISSGNGDRAKLGLTMPDIVTVI 258 Query: 155 IK--------NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIH 203 + + L FH + ++ + E ++ ++++GGG+ Sbjct: 259 HRLEENNCLDCLKMLHFHLGTQVSDIALIKEAMREASQLYVELVKLGAKMRYLNVGGGLA 318 Query: 204 FTD----------KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNT 246 K+Y ++++ + + + E G AI+ + + L Sbjct: 319 VDYDGSKTNYPASKNYNMQNYANDIVAAIQDACELGQVSPPILVSESGRAIMAHQSVLVF 378 Query: 247 TVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291 VL S AH L++ TI Sbjct: 379 DVLG-SNQTGFSEPHPPDENAHPLLKNLWECYETITAEQYQEQYH 422 >gi|170078414|ref|YP_001735052.1| arginine decarboxylase [Synechococcus sp. PCC 7002] gi|169886083|gb|ACA99796.1| arginine decarboxylase [Synechococcus sp. PCC 7002] Length = 644 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 86/316 (27%), Gaps = 51/316 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P+ + L + ++ A + + +KC + + L + Sbjct: 72 PFLIRFPDILRDRIERLQDCFATAIARYDYPNHYRGVYPVKCNQQRHLVEDLVELGRTHH 131 Query: 53 DGTTSSSLYEVMLGHEKFGG----ETHAYNVAYKDCEIDAVL------SNCDTIIFNTVS 102 G + S E+M+ E YKD + I+ Sbjct: 132 LGLEAGSKPELMIAIALLEPEADQERLLICNGYKDQHYIETALLATQLGHRALIVIEQPE 191 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153 +L+ +Q L + L I ++ + + G + Sbjct: 192 ELDLVIRASQSLGIRPMLGIRAKLASRGIGRWGGSSGDRAKFGLTIPQILRLVEKLQAEE 251 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---- 206 + + L +H + I E + ++ +GGG+ Sbjct: 252 MLDCLQLLHYHIGSQLSSISVVKSAIREASQIYVELVKLGAPMGFLDVGGGLAVDYSGSK 311 Query: 207 ------KDYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISE 253 K+Y ++++ + + + E G AI ++ L VL SE Sbjct: 312 NNFPSSKNYNMQNYANDVVATVQDTCDETNVPVPVLVSESGRAIASHQAVLIFDVLGSSE 371 Query: 254 NIKNLVIVDSSVEAHV 269 L E V Sbjct: 372 VDPILPPKPDYKEHLV 387 >gi|86130427|ref|ZP_01049027.1| Orn/DAP/Arg decarboxylase [Dokdonia donghaensis MED134] gi|85819102|gb|EAQ40261.1| Orn/DAP/Arg decarboxylase [Dokdonia donghaensis MED134] Length = 487 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 54/398 (13%), Positives = 111/398 (27%), Gaps = 61/398 (15%) Query: 13 KLLNNLDTALYIRKNAGVKLLLAL--------KCFAAWGMFDTLNQYMDGTTSSSLY--- 61 K+ +N++ A A + A K + D + +SS + Sbjct: 52 KISDNINRAKTWFAAAIKEHNYAGSYNYCYCTKSSHFKHVLDEALKNDIHIETSSAFDID 111 Query: 62 --EVMLGHEKFGGETHAYNVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQK 113 E + K +T +K + + + I + A Sbjct: 112 IVENLKAQGKINDDTFVICNGFKRDQYVQNIARLINNGHKNCITVIDNYEEITLLSDAID 171 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENKS 171 + IG+RI + K+ ++ + L F N + Sbjct: 172 GNYNIGIRIASEEEPKFEFYTSRLGLGYKNIVPFFNKEIKDNPKVTLKMLHFFINTGIRD 231 Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225 + + ++ +++GGG + DY + ++ Sbjct: 232 TAYYWNELLKCMKVYIALKKVCPSLDSLNIGGGFPIKNSLAFDYDYAYMVSEIIGQIKQT 291 Query: 226 S-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276 I+ E G V + VL + I++SS +PD Sbjct: 292 CDEAGVAVPHIFTEFGSFTVGESGGAIYQVLYQKQQNDREKWNIINSSFITTIPDTWAIN 351 Query: 277 ESATIY----PNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321 + + ++ G +C + D +++ +KP+ IG F Sbjct: 352 KRFVMLAINGWQKEYERVLLGGLTCDSDDYYNSEQHMNGIYLPKYNKDKPLYIG----FF 407 Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAI 354 + Y + F G I P + + D K + Sbjct: 408 NTGAYQESIG-GFGGLQHCLIPTPKHVLIDRDEDGKLV 444 >gi|73974229|ref|XP_858529.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 5 [Canis familiaris] Length = 154 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 5/105 (4%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 +++ D K++ I +K +KC + + + L G SS E+ L Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 66 GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKF 107 E E Y K A +T+ + +L K Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKIGVNTMTCDNEVELKKI 142 >gi|304396746|ref|ZP_07378626.1| arginine decarboxylase [Pantoea sp. aB] gi|304355542|gb|EFM19909.1| arginine decarboxylase [Pantoea sp. aB] Length = 658 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 36/274 (13%), Positives = 78/274 (28%), Gaps = 31/274 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQHKRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 147 LEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVRLV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158 ++A++L+ L I ++ + + G ++ + Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRIDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIKCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL 249 + +Y+ + G A + TV+ Sbjct: 327 S-VNYGLNEYANNVIWAIG-AACDEHGLEHPTVI 358 >gi|37499419|gb|AAQ91788.1| Ornithine Decarboxylase [Metarhizium anisopliae] Length = 276 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 37/275 (13%), Positives = 69/275 (25%), Gaps = 30/275 (10%) Query: 54 GTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 G +S E+ E Y + + N + +K Sbjct: 1 GFDCASKGEIEQVLAMGTTPERIIYAQPCETNSYVRFVKNAGVKQMTFDNADELYKIAKL 60 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN--- 169 ++ LRI + S L+ E ++ NV G+ FH Sbjct: 61 YPEAELFLRIMTDDASSLCRLSMKFGATMDTTESLLAVAKNLGLNVVGVSFHVGSGASDP 120 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQ 228 +F + ++ F + + +GGG T + + F + Sbjct: 121 LAFYKAVRDAHAVFQQAAEFGFTMRTLDVGGGFCGDTFEQMSSVLRDALDESFPAGNGID 180 Query: 229 IYLEPGEAIVTNTTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL 273 I EPG V+ T+ ++ + N S + H Sbjct: 181 IIAEPGRYYVSTAFTIACNIIARRTVEDPTLDGKGYMVYINDGVYGNFSSIMFDHQHPVA 240 Query: 274 ----------LYQESATIYPNTGPYTAMVCGRSCL 298 +A + G +C Sbjct: 241 KILRSSGRTLYNTATANACNAGEGVEYSIWGPTCD 275 >gi|163869624|gb|ABY47890.1| arginine decarboxylase [Oryza sativa Japonica Group] Length = 702 Score = 62.9 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 71/260 (27%), Gaps = 34/260 (13%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + ++ A + + +KC + + + ++ G + S Sbjct: 118 DVLRHRVEALNAAFDYAVRSTGYGGRYQGVYPVKCNQDRHVVEDIVEFGEPFRFGLEAGS 177 Query: 60 LYEVMLGH----EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E++L + + YKD E ++ T+ NTV L + ++ + Sbjct: 178 KPELLLAMSCLAARGNPDALLICNGYKDDEYVSLALIARTMGLNTVIVLEQEEELDIMVD 237 Query: 116 KKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIES--------EIKNVNG 160 L + P V + + G + + + Sbjct: 238 ASRRLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNAAQILSVVAKLKTLGMLDCLQL 297 Query: 161 LMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 L FH + + I E + I +GGG+ Sbjct: 298 LHFHIGSQIPTTALLGDGVGEAAQIYCELARLGAAMRVIDVGGGLGIDYDGSHSAQTDMS 357 Query: 218 LKEFSEKYSVQIYLEPGEAI 237 + E+Y+ + G Sbjct: 358 VAYSLEEYAAAVVAAVGRVC 377 >gi|195363107|ref|XP_002045570.1| GM11484 [Drosophila sechellia] gi|194130730|gb|EDW52773.1| GM11484 [Drosophila sechellia] Length = 114 Score = 62.9 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 2/61 (3%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + D L L + ++ A+KC + L G +S E+ L Sbjct: 33 LNICDLSSLERKLRLWHKLMPR--IEPHYAVKCNDDPVVVKFLADLGTGFDCASKNELKL 90 Query: 66 G 66 Sbjct: 91 V 91 >gi|196229714|ref|ZP_03128578.1| arginine decarboxylase [Chthoniobacter flavus Ellin428] gi|196226040|gb|EDY20546.1| arginine decarboxylase [Chthoniobacter flavus Ellin428] Length = 643 Score = 62.9 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 21/227 (9%), Positives = 59/227 (25%), Gaps = 31/227 (13%) Query: 12 QKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59 L + ++T + + +K + + + G + S Sbjct: 67 DLLRDRVETINKAFAAAMQEANYRNEYRGVFPIKVNQLREVVEEIVDAGAPYHFGIEAGS 126 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E++ E+ YKD + + + K ++ A+ L Sbjct: 127 KPELLAAMAIHRDHESLIICNGYKDKLFIENALLGRKLGKKVILVVEKIEELAEILRVSK 186 Query: 119 GLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMF 163 + + P + A ++ G + + + + + F Sbjct: 187 EVGVEPMIGIRVRLAAKGAGKWATSGGENAKFGVSTAELVAASELLKKEGLPNALKLVHF 246 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 H + + + ++ ++ +GGG+ Sbjct: 247 HVGSQVPDIGTIKRAVREAARFYSKLHKLGHELGYLDVGGGLGVDYD 293 >gi|254413160|ref|ZP_05026932.1| arginine decarboxylase [Microcoleus chthonoplastes PCC 7420] gi|196180324|gb|EDX75316.1| arginine decarboxylase [Microcoleus chthonoplastes PCC 7420] Length = 699 Score = 62.9 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 90/313 (28%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + ++ A + + +KC + + L Q Sbjct: 95 PLLIRFSDILADRIERLNACFAKAIARYNYPGRYQGVYPVKCNQHRHLVEELVQVGHPYQ 154 Query: 53 DGTTSSSLYEVMLGHEKFGGE-THAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105 G + S E+M+ + +KD E I+ + ++ Sbjct: 155 FGLEAGSKPELMIALATLKTDGALLICNGHKDREYIETALLSMRLGQKPIIVIEQLEEVQ 214 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156 D + KL + + + +S + + G + + + Sbjct: 215 LVIDISAKLGIEPIVGVRAKLSTKGSGRWGESTGDRAKFGLTLPEILSGVNQLRDAGLLN 274 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206 + L FH + I E + ++ +GGG+ Sbjct: 275 ALQLLHFHIGSQTSAISVIKDAIREASQIYVELRALGANMNYLDVGGGLAIDYDGSKTNF 334 Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ + ++ + E G AI ++ + L VL+ S+ + Sbjct: 335 HASKNYNMQNYANDIVAEVKEACEARQIPAPVLISESGRAIASHQSVLIFDVLNTSDVLS 394 Query: 257 NLVIVDSSVEAHV 269 E + Sbjct: 395 GEPAPAHQNEHLI 407 >gi|213022569|ref|ZP_03337016.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 468 Score = 62.9 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 65 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 124 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 125 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 184 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 185 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 244 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 245 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 304 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+A + Sbjct: 305 S-VNYGLNEYANNIIWAIGDACEEH 328 >gi|308188031|ref|YP_003932162.1| biosynthetic arginine decarboxylase [Pantoea vagans C9-1] gi|308058541|gb|ADO10713.1| biosynthetic arginine decarboxylase [Pantoea vagans C9-1] Length = 658 Score = 62.9 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 73/262 (27%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQHKRVIESLIHSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ ++++ Sbjct: 147 LEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVRLV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158 ++A +L+ L I ++ + + G ++ + Sbjct: 207 LEEAGRLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRIDSL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIKCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ + G A Sbjct: 327 S-VNYGLNEYANNVIWAIGAAC 347 >gi|186686305|ref|YP_001869501.1| arginine decarboxylase [Nostoc punctiforme PCC 73102] gi|186468757|gb|ACC84558.1| arginine decarboxylase [Nostoc punctiforme PCC 73102] Length = 672 Score = 62.9 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 86/288 (29%), Gaps = 48/288 (16%) Query: 12 QKLLNNLDTALYIRKN-------AGV-KLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + ++ GV + + +KC + + L ++ G + S Sbjct: 109 DILEDRIERLNACFAKAIARYNYPGVYRGVFPVKCNQERHLIEDLVKFGKPHQFGLEAGS 168 Query: 60 LYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQ 112 E+M+ YKD E I+ + +++ D + Sbjct: 169 KPELMIALAVLDTPGALLVCNGYKDREYIETAMLAQRLGQTPIIVLEQIEEVDLVIDANR 228 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMF 163 +L K L + +S + + G + IE+ ++ + F Sbjct: 229 QLGIKPILGVRAKLSTQGMGRWGASSGDRAKFGLTMPEVIEAVDKLREANLLDSLQLMHF 288 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYP 210 H + I E ++++ +GGG+ K+Y Sbjct: 289 HIGSQISAINVIKDAIQEASRIYVELAMLGADMKYLDVGGGLGVDYDGSQTNFYASKNYN 348 Query: 211 VKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251 ++++ + + + E G AI ++ + L VL Sbjct: 349 MQNYANDIVAELKDTCAERQITVPTLISESGRAIASHQSVLIFDVLST 396 >gi|33860605|ref|NP_892166.1| arginine decarboxylase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|48474802|sp|Q7V3M9|SPEA_PROMP RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|33633547|emb|CAE18504.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 648 Score = 62.9 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 96/316 (30%), Gaps = 48/316 (15%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD 53 I TP + L + + A K + +KC + + + +Y D Sbjct: 66 INTPLIIRFNDILKDRIAELNNAFSQAIETYDYKNIYKGVFPIKCNQQRNVLEKIIEYGD 125 Query: 54 ----GTTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSN------CDTIIFNTVS 102 G S E+++G + YKD + I+ Sbjct: 126 RWNFGLEVGSKSELLIGLSILENQKSLLICNGYKDKKYIETAILARKLGKHPIIVIEQRD 185 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ES 153 ++ + + + L L I +S + S+ G + + + Sbjct: 186 EVKRIIEAVKDLKATPILGIRSKLSSKSSGRWSKSVGDNSKFGLSIPEIMLTIKELKEAN 245 Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDK--- 207 I + L FH + L+ + F +++I +GGG+ Sbjct: 246 LINEMMLLHFHVGSQISDISVIKDALQEASQIFVELSKLGAPMKYIDVGGGLGIDFDGTK 305 Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE 253 +Y ++++ + + I E G AI+++ + L +L S Sbjct: 306 MSSNTSTNYSLQNYANDVIATVKDSCEVNNIQHPIIISESGRAIISHCSVLIFNILGTSH 365 Query: 254 NIKNLVIVDSSVEAHV 269 + + D ++ + Sbjct: 366 VSSQVKVSDQKKQSLI 381 >gi|189220118|ref|YP_001940758.1| arginine decarboxylase [Methylacidiphilum infernorum V4] gi|189186976|gb|ACD84161.1| Arginine decarboxylase [Methylacidiphilum infernorum V4] Length = 668 Score = 62.9 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 81/311 (26%), Gaps = 47/311 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P L + L + + K A + + +K + + + Sbjct: 68 PLLLRFQDLLRHRVLNLNQAFKEAIEEADYRGKYRAVFPIKVNQLREVIEEIVDAGSPFH 127 Query: 54 -GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK----- 106 G + S E+ E +KD + + + L K Sbjct: 128 HGLEAGSKAELFAALAMLKDSEALLICNGFKDRLFVDSIFLGRKLGKKVIQVLEKVEELD 187 Query: 107 --FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIK 156 ++ I S + A + ++ G + ++ Sbjct: 188 LVIDGLSRFKVDPIIGVRIQLASKGRGHWAYSSGDEAKFGLSTAELLQVIQRLKENHLSH 247 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------ 207 + + FH + L ++ + + I++I +GGG+ Sbjct: 248 CLQLIHFHIGSQIPDILTIKRAVREAARYYARLYQLGFPIQYIDVGGGLGVDYDGSRSTD 307 Query: 208 ----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 + + + I E G A+V + L VL + IK Sbjct: 308 SSINYSLQEYARDIVYNIAEICNEEKVPHPTIVTESGRAVVAYHSVLIVDVLGTIQKIKP 367 Query: 258 LVIVDSSVEAH 268 + S ++ Sbjct: 368 AGLQPLSFHSN 378 >gi|162450725|ref|YP_001613092.1| arginine decarboxylase [Sorangium cellulosum 'So ce 56'] gi|161161307|emb|CAN92612.1| arginine decarboxylase [Sorangium cellulosum 'So ce 56'] Length = 647 Score = 62.9 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 27/237 (11%), Positives = 64/237 (27%), Gaps = 31/237 (13%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM- 52 ++TP + + L + + A + + +K + + + Sbjct: 65 LRTPLLIRFQDLLHHRVRALNEAFNRAIAESKFRGTYRGVFPIKVNQLREVVEEILDAGK 124 Query: 53 ---DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVS 102 G S EV G E+ YKD +I +S Sbjct: 125 TYHYGVEVGSKPEVFAGLSVHTDPESLIVCNGYKDDNFIRTALIGRKLGKKVILIAEKLS 184 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIESEIKN---- 157 ++ A++++ + + + + + ++ G + + + Sbjct: 185 EVRMITRVAKEMNVEPMIGLRVRLLTEGAGKWKTSGGENAKFGLSTAEILAAIRIMDEAG 244 Query: 158 ----VNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 L FH + + +IE+I +GGG+ Sbjct: 245 MSSSFKLLHFHIGSQVPDILIIKRAVREATRYYAKLRKMGQRIEYIDVGGGLAIDYD 301 >gi|320333839|ref|YP_004170550.1| Biosynthetic arginine decarboxylase [Deinococcus maricopensis DSM 21211] gi|319755128|gb|ADV66885.1| Biosynthetic arginine decarboxylase [Deinococcus maricopensis DSM 21211] Length = 636 Score = 62.9 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 39/351 (11%), Positives = 101/351 (28%), Gaps = 60/351 (17%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 Q L + + A + + +K + +T+ Q G + S Sbjct: 68 QILAGRVRQLNEAFRKAIQEYGYTGNYQGVFPIKVNQRRMVVETIAQAGYDYAHGLEAGS 127 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ L +KD L I S+L++ +A+ Sbjct: 128 KAELALCLAQDMHPNALLCCNGFKDDGFIKLALWGRTLGKNVVITIEKYSELDRILKQAR 187 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMF 163 L K + + + + + + + G + + + ++ L Sbjct: 188 ALGVKPAIGVRFKLHARGSGMWEESGGDQAKFGLNAYELLRVVERLREEDMLDSLVMLHT 247 Query: 164 HNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK----------DYP 210 H + ++ + + ++++++GGG+ +Y Sbjct: 248 HIGSQITDIRRVKVAVREATQVYAGLVADGVPLKYLNVGGGLGVDYDGSKTTFYVSTNYT 307 Query: 211 VKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS 263 ++++ + ++ I E G A+ + L V+D++ ++ Sbjct: 308 MQEYASDIVYTVQETCKAREVAEPTIVSESGRALTAHHAVLIVPVVDVTGPTLDVQA--- 364 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA--GDIFGEFHFEKPV 312 +P Q + + + GR+ D G+ + Sbjct: 365 -----IPPAQEGQ--HQVVTDMEEILGNISGRNYREMYNDAVGDKQTLHNL 408 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 23/96 (23%), Gaps = 24/96 (25%) Query: 296 SCLAGDIFGEFHFEKPVKI--------GD--RISFEDVAGYNINRKNWFNGINMPTIA-- 343 +C + +F + VK GD + F + Y + N + A Sbjct: 500 TCDSDGKIEKFIDLRDVKATLPLHALDGDPYYLGFFLMGAYQDVLGSAHNLFGKVSEAHV 559 Query: 344 ------------VKNVDGTIKAIREFSYNDYYNNLS 367 + I Y + S Sbjct: 560 TARPGGKYHIDLFVRGQKARRMIESMGYEEAMLRES 595 >gi|284929128|ref|YP_003421650.1| arginine decarboxylase [cyanobacterium UCYN-A] gi|284809587|gb|ADB95292.1| arginine decarboxylase [cyanobacterium UCYN-A] Length = 534 Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 85/313 (27%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYMD--- 53 P + + + ++ A V+ + +K + +++ Y Sbjct: 61 PLLVHFPDIIEDRIEQLNNCFAKAMVRYSYDGSYQGVFPIKVNQQRHIVESIVNYGYKHK 120 Query: 54 -GTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 G S E+++ + + YKD + + +N + + + + Sbjct: 121 YGLEVGSKPELLIALAQLKNSNSLLICNGYKDKKYVETAVIAYHLGYNILIVVEQLSEIY 180 Query: 112 ------QKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156 + K L I +S + + G + I + + Sbjct: 181 LVADVVLEHGIKPNLGIRAKLSAKGDSRWADSAGDRAKFGLSVTEIICALDQLRKSEMLT 240 Query: 157 NVNGLMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + L FH + + I +E+ +GGG+ Sbjct: 241 KLKLLHFHIGSQISAIATIKDALSEASQIYVNLCQLGAPMEYFDVGGGLGIDYDGSNTNF 300 Query: 214 FC--------------QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIK 256 +K ++ I E G ++ ++ + L VL I + + Sbjct: 301 PASKNYSMQNYANDVVAAIKTACNNNDIEVPVIVSESGRSVASHQSILIVNVLGIDKIEE 360 Query: 257 NLVIVDSSVEAHV 269 ++ + Sbjct: 361 FNDTIEIENCHTL 373 >gi|67551182|gb|AAY68498.1| MccE [Escherichia coli] Length = 508 Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 33/322 (10%), Positives = 81/322 (25%), Gaps = 24/322 (7%) Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 S+ E+ L K E+ + I + + + + + + Sbjct: 2 CSVDEMNLAKRDGFNRIVFDGPLKKTSELLKAIEIGALIEVDNIDECKRLNELCKLHKLT 61 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + S Y + + +SE ++G H + Sbjct: 62 CRIHLRLSHYYDDNLSRFGLSESEAINLLEMLISKSEYLILDGFHLHVGSNLPNAEKICK 121 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQRLKEFSEKYS---- 226 + + ++ ++LG GI + + F + + + Sbjct: 122 AVIQYHELILRYMPDDGTLNLGSGIPADSFSASSDNPTPCPEVFFSSIYDTIKNCFGTVC 181 Query: 227 --VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE------S 278 EPG +V + V+ V + +P + + Sbjct: 182 DKWNYIFEPGRHLVEDFGYFIGKVISTKNRYGVKVAQTNIGINWIPSIRNWDHSFTLFHN 241 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS-FEDVAGYNINRKNWFNGI 337 + ++ G +C D + D + Y++ N + Sbjct: 242 HNHISDDKSDEYIIAGFNCFECDCLFPSVILPS-NLSDYLFSVRGCGAYDMQTGNQW-TR 299 Query: 338 NMPTIAVKNVD--GTIKAIREF 357 N+ + D + R Sbjct: 300 NLYAVYTITNDVVNISRIHRRE 321 >gi|197285941|ref|YP_002151813.1| arginine decarboxylase [Proteus mirabilis HI4320] gi|227356449|ref|ZP_03840837.1| biosynthetic arginine decarboxylase [Proteus mirabilis ATCC 29906] gi|226732569|sp|B4F1A4|SPEA_PROMH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|194683428|emb|CAR44185.1| biosynthetic arginine decarboxylase [Proteus mirabilis HI4320] gi|227163559|gb|EEI48480.1| biosynthetic arginine decarboxylase [Proteus mirabilis ATCC 29906] Length = 635 Score = 62.5 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 38/329 (11%), Positives = 84/329 (25%), Gaps = 38/329 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + A L+ +K + ++L G Sbjct: 63 PALFCFPQILQHRLRSINAAFHRARESYGYKGDYFLVYPIKVNQQRRVIESLINAGEPLG 122 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I L + ++ +S++ Sbjct: 123 LEAGSKAELMAVLAHANMTSSVIVCNGYKDREYIRLALTGEKLGHKVFLVIEKMSEIKMV 182 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L L + ++ + + G ++ ++ Sbjct: 183 LEEAERLEVIPRLGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLIDTLRQAGRLDSL 242 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I++ +GGG+ + + C Sbjct: 243 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQYFDVGGGLGVDYEGTRSQSDC 302 Query: 216 QRLKEFSEKYSVQIYLEPGEAI------VTNTTTLNTTVLDISENIKNLVIVDSSVEAH- 268 + +Y+ + G+A T + L + ++ Sbjct: 303 S-VNYGLNEYANNVIWAIGDACDENELPHPTVITESGRALTAHHTVLISNVIGVERNEFT 361 Query: 269 -VPDYLLYQESATIYPNTGPYTAMVCGRS 296 + G S Sbjct: 362 AITPPAEDAPRPIASLWETWEEMQTKGNS 390 >gi|3914997|sp|Q43075|SPE1_PEA RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC gi|609220|emb|CAA85773.1| arginine decarboxylase [Pisum sativum] Length = 728 Score = 62.5 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 28/262 (10%), Positives = 77/262 (29%), Gaps = 33/262 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L + L++ + + + +KC + + + ++ Sbjct: 121 PLVVRFPDVLKDRLESIHAAFDGAIQLQGYESHYQGVYPVKCNQDRYIVEDIVEFGSSFR 180 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L E +KD E ++ I+ + Sbjct: 181 FGLEAGSKPELLLAMSCLCKGNREAFLVCNGFKDSEYISLALIARKLALNTVIVLEQEEE 240 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SE 154 L+ + + KL + + + + + G + Sbjct: 241 LDMVVEISNKLCIRPVIGVRAKLKTKHSGHFGATSGDKGKFGLTTIQILHVVKKLEQLDM 300 Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV 211 + + L FH + + + ++ + + Q++ + +GGG+ Sbjct: 301 LDCLQLLHFHIGSQIPTTELLADGVREASQIYCELLRLGAQMKVLDIGGGLGIDYDGSKS 360 Query: 212 KDFCQRLKEFSEKYSVQIYLEP 233 D + + E+Y+ + Sbjct: 361 GDSDESVAYGLEEYAAAVVHAV 382 >gi|167909410|ref|ZP_02496501.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 112] Length = 212 Score = 62.5 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 58/173 (33%), Gaps = 8/173 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP Y+ D Q +L G +L+++LK + + + + DG +S Sbjct: 25 LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + + N A D + A +++ I + + +F A + + Sbjct: 82 GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 121 RINPS----VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169 + +++ L D + + + V GL N Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGN 194 >gi|115466192|ref|NP_001056695.1| Os06g0131300 [Oryza sativa Japonica Group] gi|12229999|sp|Q9SNN0|SPE1_ORYSJ RecName: Full=Arginine decarboxylase 1; Short=ARGDC1; Short=OsADC1 gi|6006369|dbj|BAA84799.1| arginine decarboxylase [Oryza sativa Japonica Group] gi|47716667|gb|AAT37534.1| arginine decarboxylase [Oryza sativa] gi|113594735|dbj|BAF18609.1| Os06g0131300 [Oryza sativa Japonica Group] gi|125553918|gb|EAY99523.1| hypothetical protein OsI_21492 [Oryza sativa Indica Group] Length = 702 Score = 62.5 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 71/260 (27%), Gaps = 34/260 (13%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + ++ A + + +KC + + + ++ G + S Sbjct: 118 DVLRHRVEALNAAFDYAVRSTGYGGRYQGVYPVKCNQDRHVVEDIVEFGEPFRFGLEAGS 177 Query: 60 LYEVMLGH----EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E++L + + YKD E ++ T+ NTV L + ++ + Sbjct: 178 KPELLLAMSCLAARGNPDALLICNGYKDDEYVSLALIARTMGLNTVIVLEQEEELDIVVD 237 Query: 116 KKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIES--------EIKNVNG 160 L + P V + + G + + + Sbjct: 238 ASRRLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNAAQILSVVAKLKTLGMLDCLQL 297 Query: 161 LMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 L FH + + I E + I +GGG+ Sbjct: 298 LHFHIGSQIPTTALLGDGVGEAAQIYCELARLGAAMRVIDVGGGLGIDYDGSHSAQTDMS 357 Query: 218 LKEFSEKYSVQIYLEPGEAI 237 + E+Y+ + G Sbjct: 358 VAYSLEEYAAAVVAAVGRVC 377 >gi|269140306|ref|YP_003297007.1| arginine decarboxylase [Edwardsiella tarda EIB202] gi|267985967|gb|ACY85796.1| arginine decarboxylase [Edwardsiella tarda EIB202] gi|304560131|gb|ADM42795.1| Biosynthetic arginine decarboxylase [Edwardsiella tarda FL6-60] Length = 658 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 79/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + + A L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFRRARASFGYQGDYFLVYPIKVNQQRRVIESLVNSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I L + ++ +S+++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKLSEIDVV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158 ++A++L L + ++ + + G ++ ++++ Sbjct: 207 LEEAKRLDVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAVQVLQLVETLRQAGHLESL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEH 350 >gi|191171887|ref|ZP_03033433.1| arginine decarboxylase [Escherichia coli F11] gi|190907922|gb|EDV67515.1| arginine decarboxylase [Escherichia coli F11] Length = 632 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 75/262 (28%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPTKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 D+A++L+ L + ++ + + G ++ ++ Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I G+A Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321 >gi|255037181|ref|YP_003087802.1| Orn/DAP/Arg decarboxylase 2 [Dyadobacter fermentans DSM 18053] gi|254949937|gb|ACT94637.1| Orn/DAP/Arg decarboxylase 2 [Dyadobacter fermentans DSM 18053] Length = 501 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 51/390 (13%), Positives = 108/390 (27%), Gaps = 49/390 (12%) Query: 12 QKLLNNLDTALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 + + N K K K + + ++ +SS +++ + Sbjct: 54 EHIENANMFFRNAFKRHNYKGTYTYCYCTKSSHFSFVLEEALKHNIHIETSSAFDIPIIR 113 Query: 68 EKFGG---ETHAYNVAYKDCEIDAVLSNCDTII--FNTVSQLNKFKDKAQKLHKKIGLRI 122 E + Y +A + I FN V L+ K+ + + Sbjct: 114 ELYRRGKVNKSTYILANGYKLPRYTQYLSELINEGFNVVPILDNLKEIESYEQQVTADSV 173 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENK---S 171 + + + + SRLG + D + + L F N K Sbjct: 174 HFGMRIATDEEPNFAFYTSRLGIRYNDVQQLYKEKIEPNPRFKLKMLHFFINTGIKDSAY 233 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT---DKDYPVKDFCQRLKEFSEKYSV- 227 + E ++ I +GGG+ Y + + E + Sbjct: 234 YWSELTRFMFKYCEMKKICPDLDSIDIGGGLPIQTSLQSGYDYQQMIDEIIENIQWICNK 293 Query: 228 ------QIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLY-QES 278 I+ E G V + + ++D + + + +++ S +PD Q+ Sbjct: 294 NNVPVPHIFTEFGSYTVGESGAVIYEIIDKKLQNDKELWYMINGSFITQLPDSWGMNQKY 353 Query: 279 ATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPV-------KIGDRISFEDVAGYNI 328 + N + G +C + D + + I F Y Sbjct: 354 IMLPINNWDNPYQKVNLGGLTCDSQDFYNSEMHSADLYMPIFEDNEPQYIGFFHTGAYQE 413 Query: 329 NRKNWFNG-----INMPTIAVKNVDGTIKA 353 + + G I P + + D + Sbjct: 414 SLG-GYGGIQHCLIPAPKHVLIDRDDEGRL 442 >gi|225164353|ref|ZP_03726618.1| arginine decarboxylase [Opitutaceae bacterium TAV2] gi|224801033|gb|EEG19364.1| arginine decarboxylase [Opitutaceae bacterium TAV2] Length = 664 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 24/227 (10%), Positives = 65/227 (28%), Gaps = 31/227 (13%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYMDGTTSSS 59 L + ++ ++A + + +K + D + Y G + S Sbjct: 74 DLLRHRVEQINRCFRDAIKEEGYKGDYRGVFPIKVNQLREVVDEIVDAGKDYGYGLEAGS 133 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQ 112 E+M+ G + YKD + + I+ +S+++ A Sbjct: 134 KPELMIALAMHEGKDRLIICNGYKDLDYIRLALIGRKIGKKIIIVVEQLSEVDDIIAVAA 193 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMF 163 ++ K + + + + + G + + + K + + F Sbjct: 194 EIGVKPMIGFRAKLQTRGEGKWSSSSGDNAKFGLNTAEILFACDKLRKAKLTTALRLVHF 253 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 H + + + + ++ +GGG+ Sbjct: 254 HIGSQVPNILTIKNAVIEASRFYCQLHKMGFPMGYLDVGGGLGIDYD 300 >gi|253988569|ref|YP_003039925.1| arginine decarboxylase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780019|emb|CAQ83180.1| biosynthetic arginine decarboxylase [Photorhabdus asymbiotica] Length = 634 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 74/251 (29%), Gaps = 28/251 (11%) Query: 13 KLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM--DGTTSSSLYEVM-- 64 +L + R++ G K L+ +K + ++L G + S E+M Sbjct: 75 RLRSINAAFRRARESYGYKGDYFLVYPIKVNQQRRVIESLASSGEPLGLEAGSKAELMAV 134 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 L H N YKD E + + + + K + AQ L + L + P Sbjct: 135 LAHAGMTRTVIVCN-GYKDREYIRLALIGEKLGHKVYLVIEKMSEIAQVLEEAERLNVIP 193 Query: 125 S-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCE- 168 S S+ G ++ ++ L FH + Sbjct: 194 RLGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLVETLREVGRLDSLQLLHFHLGSQL 253 Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + E I+ +GGG+ + + C + +Y+ Sbjct: 254 ANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCS-VNYGLNEYA 312 Query: 227 VQIYLEPGEAI 237 + G+A Sbjct: 313 NNVIWGIGDAC 323 >gi|3062801|dbj|BAA25685.1| arginine decarboxylase [Nicotiana sylvestris] Length = 621 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 78/268 (29%), Gaps = 36/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ + A + + +KC + + + ++ G Sbjct: 117 PLVVRFPDILKNRLESLQSVFDYAVQSQGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 176 Query: 56 ---TSSSLYEVMLGHEKFGGETH---AYNVAYKDCEID------AVLSNCDTIIFNTVSQ 103 + S E++L +H +KD E L I+ + Sbjct: 177 FGLEAGSKPELLLAMSCLCKGSHEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 236 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 237 LDLVIDISKKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVKKLEESG 295 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + L FH + S I E +++I GGG+ Sbjct: 296 MLDCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGAGMKYIDCGGGLGIDYDGTK 355 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 D + ++Y+ ++ + Sbjct: 356 SCDSDCSVGYGLQEYA-STVVQAVRFVC 382 >gi|126656774|ref|ZP_01727988.1| arginine decarboxylase [Cyanothece sp. CCY0110] gi|126621994|gb|EAZ92702.1| arginine decarboxylase [Cyanothece sp. CCY0110] Length = 664 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 91/311 (29%), Gaps = 48/311 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + + + ++ +A + + +K + + + Sbjct: 95 PLLIHFPDIIEDRIEELNSCFAHAITRYNYEGSYQGVFPIKVNQQRHIVQAIVNCGNNHK 154 Query: 54 -GTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK- 110 G S E+++ + YKD + + + T+ + + + Sbjct: 155 YGLEVGSKPELLIALAQLKESNALLICNGYKDQKYIETALLARRLGYQTIVVVEQLSEIK 214 Query: 111 -AQKLHKKIGLRINPSVSYS-----KFILADPNRPFSRLGEKCKDKIESEIK-------- 156 A K G+R + + ++ G + +E+ + Sbjct: 215 LAIDTAKTQGIRPVLGIRAKLSSKGDSRWGNSAGDKAKFGLTISEIMEAIEQLKAAEMLE 274 Query: 157 NVNGLMFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206 ++ L FH + S I +++ +GGG+ Sbjct: 275 SLQLLHFHIGSQISSIATIKEALTEASQIYVNLSQLGASMKYFDVGGGLGIDYDGSHSHF 334 Query: 207 ---KDYPVKDFC----QRLKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ +K E I E G AI ++ + L T VL + + Sbjct: 335 PASKNYSMQNYANDVVAAIKIACETQKLKVPIIISESGRAIASHQSVLLTNVLGVDKIPT 394 Query: 257 NLVIVDSSVEA 267 + ++ Sbjct: 395 FPIDIEKDKCH 405 >gi|53803634|ref|YP_114478.1| arginine decarboxylase [Methylococcus capsulatus str. Bath] gi|53757395|gb|AAU91686.1| arginine decarboxylase [Methylococcus capsulatus str. Bath] Length = 625 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 76/281 (27%), Gaps = 43/281 (15%) Query: 14 LLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSLYEVM 64 L + + A G + +K + + L G + S E++ Sbjct: 72 LHDRVRLLTSAFGKARAAYHYGAGYTPVYPIKVNQQRNVIENILRAGGVGLEAGSKSELL 131 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQKLHKKIG 119 T N I L I+ +S+L +++ L Sbjct: 132 AILALAESGTIICNGYKDRAYIRLALIGSRLGLRVFIVVEKLSELELVVSESEALGIAPQ 191 Query: 120 LRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE-- 168 L + +S + + G + ++ + V + FH + Sbjct: 192 LGVRIRLSSISAGKWQNSGGEKSKFGLHAGEILKFLKRLERAGGLGWVRLMHFHMGSQVA 251 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----------DYPVKDFCQR 217 E ++ + +GGG+ + +Y V ++ Sbjct: 252 NINDVKTALREASRYYAELRRLGAPVDHVDVGGGLGIDYEGTHSVSDCSINYSVDEYAHS 311 Query: 218 LKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251 + + + E G A+ + L T V+DI Sbjct: 312 IVRAFSELCAEQGLPQPDLITEAGRAMSAHHAVLVTNVVDI 352 >gi|116626724|ref|YP_828880.1| arginine decarboxylase [Candidatus Solibacter usitatus Ellin6076] gi|116229886|gb|ABJ88595.1| arginine decarboxylase [Candidatus Solibacter usitatus Ellin6076] Length = 637 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 38/294 (12%), Positives = 82/294 (27%), Gaps = 47/294 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + L + A G + +K + + + ++ Sbjct: 63 PILIRFADILKHRLGEIHNAFQTAIAEHKYQGGYCCVYPIKVNQQRQVVEEVLEFGKPFR 122 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 G + S E+M ET +KD E + + + + K+ + Sbjct: 123 FGLEAGSKPELMAVMALADNETPIICNGFKDDEYIEMAMLAQKMGRKIIPVVEKYTELQL 182 Query: 113 KLHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEI--------KN 157 L + + P++ S S+ G + + + Sbjct: 183 ILKYSAKVGVRPAIGLRVKLASRGSGRWKSSGGYRSKFGLSATEAMRALQELKDLGMSDC 242 Query: 158 VNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK------- 207 +N L FH + + + + + ++++ +GGG+ Sbjct: 243 LNLLHFHLGSQITNIRQIKGAVNEAVRVYVDLARAGAGLKFLDVGGGLGIDYDGSQTDFE 302 Query: 208 ----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 + Q + + E I E G AI + L VL + Sbjct: 303 SSVNYTLQEYANDIIYHVQNVCDEVEVAHPTIITESGRAIAAYHSVLVFNVLGV 356 >gi|40645472|dbj|BAD06581.1| arginine decarboxylase [Nicotiana tabacum] Length = 733 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 78/268 (29%), Gaps = 36/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ + A + + +KC + + + ++ G Sbjct: 117 PLVVRFPDILKNRLESLQSVFDYAVQSQGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 176 Query: 56 ---TSSSLYEVMLGHEKFGGETH---AYNVAYKDCEID------AVLSNCDTIIFNTVSQ 103 + S E++L +H +KD E L I+ + Sbjct: 177 FGLEAGSKPELLLAMSCLCKGSHEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 236 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 237 LDLVIDISKKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVKKLEESG 295 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + L FH + S I E +++I GGG+ Sbjct: 296 MLDCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGAGMKYIDCGGGLGIDYDGTK 355 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 D + ++Y+ ++ + Sbjct: 356 SCDSDCSVGYGLQEYA-STVVQAVRFVC 382 >gi|158334821|ref|YP_001515993.1| arginine decarboxylase [Acaryochloris marina MBIC11017] gi|158305062|gb|ABW26679.1| arginine decarboxylase [Acaryochloris marina MBIC11017] Length = 674 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 104/348 (29%), Gaps = 58/348 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + ++ A + + +KC + + L ++ Sbjct: 104 PLLIRFSDILADRIERLNACFAKAIARYSYPGRYRGVFPVKCNQQRHLVEDLVRFGQPHQ 163 Query: 53 DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLS------NCDTIIFNTVSQLN 105 G + S E+++ YKD E + I+ + ++ Sbjct: 164 FGLEAGSKPELLIAIASLKTSGALLICNGYKDLEYVETAMLAQRLGHQAIIVIEQLEEVE 223 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156 + +++L + L + +S + + G + + + Sbjct: 224 LVIEASRRLQIQPILGVRAKLSAKGIGRWGTSAGDRAKFGLNIPEVVAAVEHLRAANLLN 283 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------- 206 ++ L FH + + L+ + E ++++ +GGG+ Sbjct: 284 SLQLLHFHIGSQISAISVIKDALREASQIYVELARLGANMKFLDVGGGLGVDYDGSKSNS 343 Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ + ++ + E G AI ++ + L VL S+ + Sbjct: 344 AASKNYNMQNYANDVVAEVKEACAEADIPVPTLVSESGRAIASHQSVLIMNVLGSSDTLN 403 Query: 257 NLVIVDSSVEAHV----------PDYLLYQESATIYPNTGPYTAMVCG 294 + E + D YQE+ + G Sbjct: 404 LTPEPAQADEHLIIRNLWETYQTIDTENYQEAYHDALQFKEEAVSLFG 451 >gi|254785714|ref|YP_003073143.1| arginine decarboxylase [Teredinibacter turnerae T7901] gi|239918944|gb|ACR12004.2| arginine 2-monooxygenase [Teredinibacter turnerae T7901] Length = 639 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 85/312 (27%), Gaps = 48/312 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + + L + + A + + +K + + + Q+ Sbjct: 66 PVLVRFEDLLEQQIGRLNNAFRKAIADTGYQAPYRGVFPIKVNQQCHVVEEICNVGAQFG 125 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------ 105 G + S E+++ + H YKD E + + + ++ + Sbjct: 126 HGLEAGSKPELIIALAHLESPDAHIVCNGYKDQEFIDLGLHACKMGYSCFFVVETPTELP 185 Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------K 156 ++++ L+ K + + S + S G +E Sbjct: 186 IIIERSRALNIKPLIGVRVKLASMVGGHWTATSGDRSIFGLSITQLVEVVDTLKAEGMLD 245 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + L +H + + + + ++ LGGG+ Sbjct: 246 CLQLLHYHLGSQIPNIRDIRTGVTEACQVYMNLVREGAAMGFLDLGGGLAVDYDGSNTNY 305 Query: 208 --------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + D + I E G A+V ++ L VLD++ Sbjct: 306 IHSRNYTLEEYCADIIDVIMSTLNPEQIAHPTIITESGRALVAYSSVLLFNVLDVASFQV 365 Query: 257 NLVIVDSSVEAH 268 + E H Sbjct: 366 GQLPESIPREEH 377 >gi|158145207|gb|ABW21835.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLVVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|315127973|ref|YP_004069976.1| arginine decarboxylase [Pseudoalteromonas sp. SM9913] gi|315016487|gb|ADT69825.1| arginine decarboxylase [Pseudoalteromonas sp. SM9913] Length = 626 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 86/308 (27%), Gaps = 46/308 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLN--QYMD 53 P + L N +DT A + +K + L + Sbjct: 60 PVLVRFTDILKNRVDTLTNAFTQARTNREYNGKYTCVYPIKVNQQRSVVSKLLAHPSGLV 119 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 G + S E+M YKD E + + + + K + Sbjct: 120 GLEAGSKPELMAILGVAKEPITIVCNGYKDSEFLRLACIGQAMGHSVKIVVEKLSELTTL 179 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNV 158 L + L I P+ S K + + G + S++ + Sbjct: 180 LEEIDNLGIEPAIGIRIRLNSVGKGKWQNTGGEKGKFGLTAGQVLSAVEVLKQHSKLHLM 239 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 + FH + + L+ + F + + + +GGG+ + Sbjct: 240 QMVHFHIGSQIANIRDIHRALRECARHFAELTQYGVPLNTVDVGGGLGVDYEGSGSRSAC 299 Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 + ++ + +++ I E G A+ + L T V+D+ + +L Sbjct: 300 SMNYTVEEYARNVVNAFADVCDQHNLTHPAIITESGRALTAHHAVLITDVIDVEKAPNHL 359 Query: 259 VIVDSSVE 266 Sbjct: 360 NPEPPLEN 367 >gi|327540610|gb|EGF27184.1| Arginine decarboxylase [Rhodopirellula baltica WH47] Length = 668 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 78/285 (27%), Gaps = 47/285 (16%) Query: 14 LLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLY 61 L + L KN + + + +K + + + G + S Sbjct: 74 LRDRLRELDRCFKNAIHDHKYQSRYRCVFPIKVNQQREVVQQIVSEGARLGFGIEAGSKP 133 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLNKFKDKAQKLH 115 E++ +KD E + + + VS+L+ D A+ + Sbjct: 134 ELVAAVAMGDANVPIVCNGFKDEEFIRLALLAQRLGRNVLPVVEKVSELDLILDVAKDIG 193 Query: 116 KKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNN 166 + + + ++ S+ G + + + L FH Sbjct: 194 VRPTIGMRVKLATRGSGRWQASGGYRSKFGLTVAELLAQLDRLIAMDMGDCLQLLHFHVG 253 Query: 167 CENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK---------------- 207 + + + I + + ++ +GGG+ Sbjct: 254 SQIGNIRQLKSAILEAARIYVDLVRRGAGMRYLDVGGGLGVDYDGSRSDSESSMNYTMQE 313 Query: 208 -DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 V Q + + + ++ E G A+ + + L L + Sbjct: 314 YANDVVYHTQTVCDEAGVPHPELISESGRAVAAHHSVLVMETLGV 358 >gi|297836704|ref|XP_002886234.1| hypothetical protein ARALYDRAFT_900320 [Arabidopsis lyrata subsp. lyrata] gi|297332074|gb|EFH62493.1| hypothetical protein ARALYDRAFT_900320 [Arabidopsis lyrata subsp. lyrata] Length = 702 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 81/278 (29%), Gaps = 36/278 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L+ + + + +KC + + + ++ Sbjct: 95 PLIVRFPDVLKNRLECLQSAFDYAIQSQGYGSHYQGVYPVKCNQDRFIIEDIVEFGSSFR 154 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L E +KD E ++ I+ + Sbjct: 155 FGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFKDSEYISLALFGRKLELNTVIVLEQEEE 214 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D +QK++ + GLR +S + + G + Sbjct: 215 LDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTIQIVRVVRKLSQVG 273 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + L FH + S A + E ++ I +GGG+ Sbjct: 274 MLECLQLLHFHIGSQIPSTALLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYDGSK 333 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 + + E+Y+ + + + + + Sbjct: 334 SGESDLSVAYSLEEYA-AAVVASVRFVCDQKSVKHPVI 370 >gi|158145229|gb|ABW21846.1| putative arginine decarboxylase [Solanum chilense] gi|158145237|gb|ABW21850.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDLFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|32472684|ref|NP_865678.1| arginine decarboxylase [Rhodopirellula baltica SH 1] gi|48474355|sp|Q7UTS2|SPEA_RHOBA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|32443921|emb|CAD73363.1| arginine decarboxylase [Rhodopirellula baltica SH 1] Length = 668 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 78/285 (27%), Gaps = 47/285 (16%) Query: 14 LLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLY 61 L + L KN + + + +K + + + G + S Sbjct: 74 LRDRLRELDRCFKNAIHDHKYQSRYRCVFPIKVNQQREVVQQIVSEGARLGFGIEAGSKP 133 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLNKFKDKAQKLH 115 E++ +KD E + + + VS+L+ D A+ + Sbjct: 134 ELVAAVAMGDANVPIVCNGFKDEEFIRLALLAQRLGRNVLPVVEKVSELDLILDVAKDIG 193 Query: 116 KKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNN 166 + + + ++ S+ G + + + L FH Sbjct: 194 VRPTIGMRVKLATRGSGRWQASGGYRSKFGLTVAELLAQLDRLIAMDMGDCLQLLHFHVG 253 Query: 167 CENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK---------------- 207 + + + I + + ++ +GGG+ Sbjct: 254 SQIGNIRQLKSAILEAARIYVDLVRRGAGMRYLDVGGGLGVDYDGSRSDSESSMNYTMQE 313 Query: 208 -DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 V Q + + + ++ E G A+ + + L L + Sbjct: 314 YANDVVYHTQTVCDEAGVPHPELISESGRAVAAHHSVLVMETLGV 358 >gi|260914641|ref|ZP_05921107.1| arginine 2-monooxygenase [Pasteurella dagmatis ATCC 43325] gi|260631240|gb|EEX49425.1| arginine 2-monooxygenase [Pasteurella dagmatis ATCC 43325] Length = 614 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 32/265 (12%) Query: 2 IKTPYYLIDKQKLLNNL----DTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52 + T + Q + + L R+N G + L+ +K + ++L Sbjct: 42 LPT-LFCF-PQIIQHRLCSINQAFQQARENFGYEGNYFLVYPIKVNQHRRVIESLINSGQ 99 Query: 53 -DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLS-----NCDTIIFNTVSQL 104 G + S E+M L H N I L + ++ +S++ Sbjct: 100 TLGLEAGSKAELMAVLAHAGVTQTVIVCNGYKDREYIRFALMGEKLGHKVYLVIEKLSEI 159 Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEI 155 ++A KL+ K L + ++ + + G + + Sbjct: 160 QLVLEEAAKLNVKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLSLVNMLKEHDCL 219 Query: 156 KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK 212 + L FH + + E I+ +GGG+ + + Sbjct: 220 DCLQLLHFHLGSQLGNIRDVATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGNRTQ 279 Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAI 237 C + +Y+ + G+A Sbjct: 280 SDCS-VNYGLNEYADTVVWGIGQAC 303 >gi|317455968|gb|ADV29076.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSECLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTDLLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|307824977|ref|ZP_07655199.1| arginine decarboxylase [Methylobacter tundripaludum SV96] gi|307734024|gb|EFO04879.1| arginine decarboxylase [Methylobacter tundripaludum SV96] Length = 608 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 85/308 (27%), Gaps = 45/308 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFD-TLNQYMDGT 55 P + L + + + A + +K + + L G Sbjct: 61 PVLVRFTDILKDRVTQLSNAFQKACVNNDYQGNYTPVYPIKVNQQRKVVEGILAADNIGL 120 Query: 56 TSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKD 109 + S E+ L + YKD + ++ +L + Sbjct: 121 EAGSKPEL-LAIMALSNKGVVVCNGYKDRAYIRLALIGLKMGLNLYLVIEKPLELELIIE 179 Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNVNG 160 +A +L+ K L + +S + + G + ++ + + Sbjct: 180 EAARLNIKPQLGVRIRLSSISAGKWQNSGGEKSKFGLHAPEVLQLIERLKQAGLLDTLKL 239 Query: 161 LMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK---------- 207 + FH + + LK E ++ + GGG+ Sbjct: 240 MHFHMGSQIANIHDIKIALKEAGQFYVELHRLGANVKIVDAGGGLGVDYDGSHSRRESSI 299 Query: 208 DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260 +Y + ++ Q + I E G A+ + L T V DI N Sbjct: 300 NYSLDEYAQNIVRSFADICAEKQVPQPDIITESGRALTAHHAVLITNVTDIESVYANHAE 359 Query: 261 VDSSVEAH 268 + + E H Sbjct: 360 LQALPEPH 367 >gi|226227457|ref|YP_002761563.1| biosynthetic arginine decarboxylase [Gemmatimonas aurantiaca T-27] gi|226090648|dbj|BAH39093.1| biosynthetic arginine decarboxylase [Gemmatimonas aurantiaca T-27] Length = 652 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 80/327 (24%), Gaps = 48/327 (14%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYMDGTTSSS 59 L + ++T A G + +K + + + + G S Sbjct: 81 DILRSRIETLSERFGAAIREFEYTGGYTTVYPIKVNQQRHVVEEIVRFGKTHGVGLECGS 140 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 E+ E YKD E + L + I+ VS+L+ + A Sbjct: 141 KPELQAVLGLSHSTEHLIVCNGYKDHEFMRLALMGQKLGHTVFIVLEQVSELDVLLEVAD 200 Query: 113 KLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMF 163 +L + S A S+ G + I+ + + F Sbjct: 201 ELGVTPTCGVRIKLASEGAGRWAQSGGEKSKFGLSSAELIKLIDKLQAANRLDILKLIHF 260 Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207 H + + E I + +GGG+ Sbjct: 261 HLGSQITDIRFIKSGLQEVARFYLELRAVGVDITHVDVGGGLGIDYDGTNSTNNASVNYT 320 Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS 263 V +E I E G A+ + L V+D+ + + Sbjct: 321 LQEYANDVVYTIAEACREAELSMPHIISESGRALTAHHALLLIKVIDVESQAEQPIPALD 380 Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTA 290 + + + P Sbjct: 381 DDDHSLLHEMYEDWRTLTERAARPRKV 407 >gi|166367422|ref|YP_001659695.1| arginine decarboxylase [Microcystis aeruginosa NIES-843] gi|166089795|dbj|BAG04503.1| arginine decarboxylase [Microcystis aeruginosa NIES-843] Length = 679 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 97/346 (28%), Gaps = 57/346 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52 P + L + ++ A + + +KC + ++L ++ Sbjct: 92 PLLIRFSDILEDRIERLNACFSRAIARYNYPNVYRGVYPIKCNQHRHIVESLVRFGKPYQ 151 Query: 53 DGTTSSSLYEVMLGHEKFGG---------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ 103 G + S E+M+ + YKD E + + Sbjct: 152 FGLEAGSKPELMIALATLEPALNGKNDKTQPLLICNGYKDKEYIETALLTTRLGHRPLIV 211 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSK-------FILADPNRPFSRLGEKCKDKIESEI- 155 + + ++ L L I P + ++ G + + Sbjct: 212 IEQLEELYLTLRVSRQLGIAPHLGVRAKLGTKGVGRWGCSTGDRAKFGLTVPEILTVVTE 271 Query: 156 -------KNVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFT 205 + L +H + + ++ + E + ++ +GGG+ Sbjct: 272 LEQAGMLDCLQLLHYHIGSQISAISVIKDAIREASQIYVELAKLGANMTYLDVGGGLGVD 331 Query: 206 D----------KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTV 248 K+Y ++++ + ++ + E G AI ++ + L + Sbjct: 332 YDGSKTNFYASKNYNMQNYANDIVAEVKEACEDAQISPPILISESGRAIASHQSVLVFDI 391 Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294 L SE +N + E + L++ I G Sbjct: 392 LGSSEVPQNPPDPCNGKEHLIL-RNLWETYTGIDERNYQEAYHDAG 436 >gi|158145259|gb|ABW21861.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------- 153 L+ D ++K+ + GLR +S + + G + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MFDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|320451384|ref|YP_004203480.1| arginine decarboxylase [Thermus scotoductus SA-01] gi|320151553|gb|ADW22931.1| arginine decarboxylase [Thermus scotoductus SA-01] Length = 630 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 81/299 (27%), Gaps = 48/299 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P L Q L + + A G + + +K + +T+ + Sbjct: 63 PLVLRFPQILEARVRELNEAFRRAMEKYGYHGGYRGVYPVKVNQRRLVLETVAKAGRPYH 122 Query: 53 DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 G + S E+ L E +KD + + + N V L KF + + Sbjct: 123 YGLEAGSKAELALILAQDLSPEALITTNGFKDDDFIRLALTGKKLSRNVVITLEKFAELS 182 Query: 112 QKLHKKIGLRINPSVSYSK-------FILADPNRPFSRLGEKCKDKIES--------EIK 156 + + L + P + ++ G + I + + Sbjct: 183 RVIRISKELGVRPKLGIRYKLKAKGAGQWEASGGENAKFGLTTPEIIRAVEILKEEGLLD 242 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + + H + + + +++++LGGG+ Sbjct: 243 ALVMIHAHIGSQVTDIRKIKAAVREAAQTYVQLRKLGAPLQYLNLGGGLAVDYDGSKTNF 302 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + + + E + + E G A+ L V+D+ Sbjct: 303 YASANYTLPEYAEDLVYVTKEVVEAQGEPHPTLVTESGRAVTAYHEVLVLEVIDVITPP 361 >gi|16332143|ref|NP_442871.1| arginine decarboxylase [Synechocystis sp. PCC 6803] gi|15214309|sp|P74576|SPEA1_SYNY3 RecName: Full=Biosynthetic arginine decarboxylase 1; Short=ADC 1 gi|1653772|dbj|BAA18683.1| arginine decarboxylase [Synechocystis sp. PCC 6803] Length = 695 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 102/342 (29%), Gaps = 57/342 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYM---- 52 P L L + ++ + + +KC + ++L +Y Sbjct: 101 PLLLRFSDILADRINRLNAAFARGIARYRYPNTYRGVYPIKCNQHRHIVESLVRYGTPYN 160 Query: 53 DGTTSSSLYEVMLGHEKFGG----------ETHAYNVAYKDCEIDAVL------SNCDTI 96 G + S E+M+ + YKD E + I Sbjct: 161 FGLEAGSKPELMIALAMLQPQENPEPDQQNQPLLICNGYKDREYIETALLARRLGHRPII 220 Query: 97 IFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI 155 + V+++ + + L K L + +S + + G + + + Sbjct: 221 VVEQVAEVALAIEISSNLGIKPILGVRAKLSTQGMGRWGISTGDRAKFGLTIPEMLTAIE 280 Query: 156 K--------NVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHF 204 + ++ L FH + S + + F + ++ +GGG+ Sbjct: 281 QLRRADMLDSLQLLHFHIGSQISSISVIKEAMTEASQIFVQLAKLGANMRYLDVGGGLGV 340 Query: 205 TD----------KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTT 247 K+Y ++++ + + + E G AI ++ + L Sbjct: 341 DYDGSKTNFYASKNYNIQNYVNDVISAVQDACVAAEVPCPVLISESGRAIASHQSVLIFD 400 Query: 248 VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 V+ ++ L V A + + + E+ T+ Y Sbjct: 401 VVATNDINPPLPKVKGKDHAILRNLMETWETITVDNYQEAYH 442 >gi|302842606|ref|XP_002952846.1| hypothetical protein VOLCADRAFT_93499 [Volvox carteri f. nagariensis] gi|300261886|gb|EFJ46096.1| hypothetical protein VOLCADRAFT_93499 [Volvox carteri f. nagariensis] Length = 499 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 16/152 (10%), Positives = 42/152 (27%), Gaps = 6/152 (3%) Query: 23 YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAY 81 A+K + + + G +SL E+ F + ++ Sbjct: 2 RAAFPHNTLHTFAVKANPVKRVLELMRDAGLGAEVASLGELRHALSCGFPPDRVVFDSPI 61 Query: 82 KDCEIDAVLSNCDTIIFNTVSQLN---KFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138 K + + N + + K + + R+ + ++ Sbjct: 62 KTAAELRFALEAGRTARRSGNPKNPQTQTATLSYKHNPETAPRVGEGRIAALSTAGRVSK 121 Query: 139 PFSRLGEKCKDKIES--EIKNVNGLMFHNNCE 168 + L E + + + + +N L H + Sbjct: 122 FGTPLLECRSELLAAFEKHPWINALHVHVGSQ 153 Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 34/116 (29%), Gaps = 14/116 (12%) Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 Q+ E G +V + V V+V + + E+ + Sbjct: 296 QLVTEFGRCLVAKSVFAVGRVEYSKRCGGRRVVVSGLGGDLLLRAVYLPETWPVRV---- 351 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343 + GR ++ P D + DV Y ++ + +N P + Sbjct: 352 ELYGIDGR--------RKYPPLPP--SCDWVVVPDVGAYCLSMYSRYNSRCSPAVW 397 >gi|254526034|ref|ZP_05138086.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9202] gi|221537458|gb|EEE39911.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9202] Length = 648 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 99/316 (31%), Gaps = 48/316 (15%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD 53 I TP + L + ++ A + + +KC + + + ++ Sbjct: 66 INTPLIIRFNDILKDRINALHDAFLKAIKTYKYKNIYQGVFPVKCNQQKNVLEKIIEFGS 125 Query: 54 ----GTTSSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCD------TIIFNTVS 102 G S E+++G + YKD + + + I+ Sbjct: 126 PWNFGLEVGSKSELLIGLALLENQNSLLICNGYKDKKYIEIATLARKLGKNPIIVIEQKD 185 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIE--------S 153 ++ + + Q L+ + I +S + S+ G + + + Sbjct: 186 EVKRIIEAVQDLNASPLIGIRAKLSSKSSGRWSKSVGDNSKFGLSIPEIMSTIKELKEAN 245 Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK--- 207 I + L FH + L+ + E +++I +GGG+ Sbjct: 246 LINEMRLLHFHIGSQISDIAVIKDALQEASQIYVELCKLGAPMKYIDVGGGLGIDFDGTK 305 Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE 253 +Y ++++ + + I E G AI+++ + L VL S Sbjct: 306 TSSNTSTNYSLQNYANDVIATIKDSCELNNIEHPTIISESGRAIISHCSVLIFNVLGTSH 365 Query: 254 NIKNLVIVDSSVEAHV 269 L I D ++ + Sbjct: 366 VSSKLKIYDDKNQSLI 381 >gi|190576182|ref|YP_001974027.1| arginine decarboxylase [Stenotrophomonas maltophilia K279a] gi|190014104|emb|CAQ47743.1| putative biosynthetic arginine decarboxylase [Stenotrophomonas maltophilia K279a] Length = 629 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 97/332 (29%), Gaps = 46/332 (13%) Query: 29 GVKLLLALKCFAAWGMFDTLNQY---MDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCE 85 G + +K G+ TL + G + S E+M YKD E Sbjct: 92 GYTAVYPIKVNQTRGVAGTLASHHGEGFGLEAGSKPELMAVLALSRPGGLIVCNGYKDRE 151 Query: 86 IDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139 + I+ S+L ++++ L K GL + ++ + Sbjct: 152 YIRLALIGRKLGLQTFIVIEKPSELKLVLEESKALDVKPGLGVRMRLASLGAGKWQNSGG 211 Query: 140 FS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---G 187 + G + ++ +N L FH + + + ++ + F Sbjct: 212 DKAKFGLSPRQLLDLWKSLRDTEYADCLNLLHFHMGSQISNVRDIANGMREATRYFVELS 271 Query: 188 HFITQIEWISLGGGIHFTDK----------DYPVKDFCQRLKEFSEK-------YSVQIY 230 +I + +GGG+ + +Y + + + + +I Sbjct: 272 RLGAKITHVDVGGGLGVDYEGTRSRSFCSINYGLHSYASNIVQPLANACEEFGLTPPRIV 331 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE----AHVPDYL-LYQESATIYPNT 285 E G A+ + L V ++ E + V E H+ + + Sbjct: 332 TECGRAMTAHHAVLIANVSEVEEAQEGRVPDQHDDEPAAIRHLREIHDELDVRPAVELFQ 391 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 G LA G+ + +I D Sbjct: 392 EAQHFHAEG---LASYALGQIDLPQRARIDDL 420 >gi|220936281|ref|YP_002515180.1| arginine decarboxylase [Thioalkalivibrio sp. HL-EbGR7] gi|219997591|gb|ACL74193.1| arginine decarboxylase [Thioalkalivibrio sp. HL-EbGR7] Length = 627 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 79/299 (26%), Gaps = 46/299 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLNQYMD-- 53 P + + L + + NA + +K + L D Sbjct: 62 PVLIRFQDILTDRVHRLRQAFDNARAETGFTGNYTAVYPIKVNQQRSVVEQILEAGGDRV 121 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVL------SNCDTIIFNTVSQLNKF 107 G + S E+M YKD E + + I+ S+L+ Sbjct: 122 GLEAGSKPELMAVLALSRPGGVIVCNGYKDREYLRLALIGRLLGHRVYIVIEKPSELDGV 181 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNR-----------PFSRLGEKCKDKIESEIK 156 + A+ L + L + ++ +L E+ +D + Sbjct: 182 MEAARDLGVRPMLGMRVRLASIGKGKWQNTGGEKAKFGLSASQSLKLLERLRDADMLDCM 241 Query: 157 NVNGLMFHNNC-ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 + + + E I+ + GGG+ + Sbjct: 242 QLLHFHMGSQIANIRDIQAGMGEAGRFYAELRRLGADIQVVDAGGGLGVDYEGSRSRNDC 301 Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 + + + +Y QI+ E G A+ + L T V+D + Sbjct: 302 SMNYSLQEYANNIVRGIMNTCREYDLPHPQIFTESGRALTAHHAVLVTNVIDTERAPEQ 360 >gi|222524483|ref|YP_002568954.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus sp. Y-400-fl] gi|222448362|gb|ACM52628.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus sp. Y-400-fl] Length = 503 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 83/337 (24%), Gaps = 38/337 (11%) Query: 28 AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-----EKFGGETHAYNVAYK 82 A A K A T +S+ ++++ H + K Sbjct: 85 APFHYAYATKANFAAEAVQTALAAGAHYETSATADLIIAHGLWRQGILPPDRLICCNGSK 144 Query: 83 DCEIDAVLS-----NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR-INPSVSYSKFILADP 136 + + C+T+I + G+R + D Sbjct: 145 EPAYRNAIRQLRLDGCETVIPVLDDLSELHDLITTPAPLQFGVRERAAGNRDGRHPGNDR 204 Query: 137 NRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN---IEKEFGHFITQI 193 E+ D I + + + + F L+ + + Sbjct: 205 FGLTMAEIEQAADLIATTEHRLVLYHAMIGSQIEDEGHFLTTLRASIENYCRLRRRVPTL 264 Query: 194 EWISLGGGIH----FTDKDYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTT 242 + + GGG+ ++ + F RL + E G V + Sbjct: 265 RYFNFGGGVPTAGYQLTFNFDYQRFLARLMATVRDLCAEYDVPVPELIGEFGRYTVATHS 324 Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHV---PDYLLYQESATIY-----PNTGPYTAMVCG 294 V + + + + PD L + + + G Sbjct: 325 AYLVEVGAVKAGQPDQPDWYLINGSLMVMLPDTLFVSGQEFVILPLSDWHRPVRPVRLAG 384 Query: 295 -RSCLAGDIFGE----FHFEKPVKIGDRISFEDVAGY 326 R+C + DI+ + G ++ + Y Sbjct: 385 RRTCDSDDIYPRPEQPPLWLPETDGGLVLAIFGIGAY 421 >gi|159030382|emb|CAO91278.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 679 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 97/346 (28%), Gaps = 57/346 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52 P + L + ++ A + + +KC + ++L ++ Sbjct: 92 PLLIRFSDILEDRIERLNACFSRAIARYNYPNVYRGVYPIKCNQHRHIVESLVRFGKPYQ 151 Query: 53 DGTTSSSLYEVMLGHEKFGG---------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ 103 G + S E+M+ + YKD E + + Sbjct: 152 FGLEAGSKPELMIALATLEPALSGKNDKTQPLLICNGYKDKEYLETALLTTRLGHRPLIV 211 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSK-------FILADPNRPFSRLGEKCKDKIESEI- 155 + + ++ L L I P + ++ G + + Sbjct: 212 IEQLEELYLTLRVSRQLGIAPHLGVRAKLGTKGVGRWGCSTGDRAKFGLTVPEILTVVTE 271 Query: 156 -------KNVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFT 205 + L +H + + ++ + E + ++ +GGG+ Sbjct: 272 LEQAGMLDCLQLLHYHIGSQISAISVIKDAIREASQIYVELAKLGANMTYLDVGGGLGVD 331 Query: 206 D----------KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTV 248 K+Y ++++ + ++ + E G AI ++ + L + Sbjct: 332 YDGSKTNFYASKNYNMQNYANDIVAEVKEACEDAQISPPILISESGRAIASHQSVLVFDI 391 Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294 L SE +N + E + L++ I G Sbjct: 392 LGSSEVPQNPPDPCNGKEHLIL-RNLWETYTGIDERNYQEAYHDAG 436 >gi|163846678|ref|YP_001634722.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus aurantiacus J-10-fl] gi|163667967|gb|ABY34333.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus aurantiacus J-10-fl] Length = 500 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 83/337 (24%), Gaps = 38/337 (11%) Query: 28 AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-----EKFGGETHAYNVAYK 82 A A K A T +S+ ++++ H + K Sbjct: 82 APFHYAYATKANFAAEAVQTALAAGAHYETSATADLIIAHGLWRQGILPPDRLICCNGSK 141 Query: 83 DCEIDAVLS-----NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR-INPSVSYSKFILADP 136 + + C+T+I + G+R + D Sbjct: 142 EPAYRNAIRQLRLDGCETVIPVLDDLSELHDLITTPAPLQFGVRERAAGNRDGRHPGNDR 201 Query: 137 NRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN---IEKEFGHFITQI 193 E+ D I + + + + F L+ + + Sbjct: 202 FGLTMAEIEQAADLIATTEHRLVLYHAMIGSQIEDEGHFLTTLRASIENYCRLRRRVPTL 261 Query: 194 EWISLGGGIH----FTDKDYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTT 242 + + GGG+ ++ + F RL + E G V + Sbjct: 262 RYFNFGGGVPTAGYQLTFNFDYQRFLARLMATVRDLCAEYDVPVPELIGEFGRYTVATHS 321 Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHV---PDYLLYQESATIY-----PNTGPYTAMVCG 294 V + + + + PD L + + + G Sbjct: 322 AYLVEVGAVKAGQPDQPDWYLINGSLMVMLPDTLFVSGQEFVILPLSDWHRPVRPVRLAG 381 Query: 295 -RSCLAGDIFGE----FHFEKPVKIGDRISFEDVAGY 326 R+C + DI+ + G ++ + Y Sbjct: 382 RRTCDSDDIYPRPEQPPLWLPETDGGLVLAIFGIGAY 418 >gi|330891073|gb|EGH23734.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. mori str. 301020] Length = 122 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 30/121 (24%), Gaps = 9/121 (7%) Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPYT-------AMV 292 VLD + +V + I+ P T V Sbjct: 1 CGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQGHDHPVIHVPCAPATGASEEQAYTV 60 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTI 351 G+ C D+ K V IGD + Y N + F P + Sbjct: 61 VGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGYNISHVDFLCHPRPVQHFVRNGERV 120 Query: 352 K 352 + Sbjct: 121 R 121 >gi|254442154|ref|ZP_05055630.1| arginine decarboxylase [Verrucomicrobiae bacterium DG1235] gi|198256462|gb|EDY80770.1| arginine decarboxylase [Verrucomicrobiae bacterium DG1235] Length = 656 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 32/295 (10%), Positives = 84/295 (28%), Gaps = 48/295 (16%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD 53 IK P + + L + ++ + + + +K + + + + Sbjct: 61 IKAPMVIRFQDLLRHRVERLNKAFAESIKEEEYPANYRGVFPIKVNQLREVIEEIQDAGE 120 Query: 54 ----GTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVS 102 G + S E+++ + YKD + + N I+ +S Sbjct: 121 NHSYGLEAGSKPELLIAMAMHQNSNSLLVCNGYKDEDYIRLALNYRKIGKKIIIVAEQLS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEIK----- 156 ++ + +++L + + + ++ G + +E+ Sbjct: 181 EVELIIEMSRELEVDPLVGLRAKLGTRGEGKWAMSTGDNAKFGLSAMEMLEAARMLEKAE 240 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 ++ L FH + + + + ++ +GGG+ Sbjct: 241 LSGSLRLLHFHIGSQVPNIITLKTAVVEATRYYCQLQKMGFPMGFLDVGGGLAIDYDGSR 300 Query: 208 --------------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 V +++ + + E G AIV + L T V Sbjct: 301 SNYESSTNYTLEEYARDVVYNVKQICVKMKVPCPDLITESGRAIVAPHSVLITEV 355 >gi|304380083|ref|ZP_07362805.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304341349|gb|EFM07266.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 82 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 Y+ D L ++L + ++ A+K + + DT++QY++G +S E+ G Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 67 H 67 Sbjct: 80 L 80 >gi|325955691|ref|YP_004239351.1| Orn/DAP/Arg decarboxylase 2, N-terminal protein [Weeksella virosa DSM 16922] gi|323438309|gb|ADX68773.1| Orn/DAP/Arg decarboxylase 2, N-terminal protein [Weeksella virosa DSM 16922] Length = 464 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 62/422 (14%), Positives = 121/422 (28%), Gaps = 64/422 (15%) Query: 3 KTPY-YLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMD 53 TP + K+ N+ A +A KL K + + Sbjct: 42 GTPLKFTY-LPKISQNIQRAKSWFNDARKKLNYQGTYNYCYCTKSSHFRHIIKEALKNDI 100 Query: 54 GTTSSSLY-----EVMLGHEKFGGETHAYNVAYKDCEIDAV------LSNCDTIIFNTVS 102 +SS Y E +L + + +K E + TI Sbjct: 101 HIETSSAYDINIVESLLNEGLMNHDQYVICNGFKREEYVENIARLINNGHRKTITVIDNY 160 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--KIESEIKNVNG 160 + + A + +IG+RI + + +E V Sbjct: 161 EEVELFSDAIEGDFEIGIRIASEEEPKFEFYTSRLGIGYKDIVPFYNNMVKPNERIKVKM 220 Query: 161 LMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDF 214 L F N K + + +++ +++GGG + +Y Sbjct: 221 LHFFINTGIKDNSYYWNELVKCLRVYVNLKKVCPELDSLNIGGGFPIKNSLTFEYDYAYM 280 Query: 215 CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSV 265 + + +K+ I+ E G V + + VL + + ++DSS Sbjct: 281 AEEILGQIKKFCDEEGIPVPNIFTEFGSFTVGESGGMIYKVLYQKKQNDKEYWDMIDSSF 340 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEK 310 +PD + ++ G +C + D ++ K Sbjct: 341 MTTLPDAWAISKRFVMLPLNRWYDTYERVLLGGLTCDSDDYYNSEQHVNAIYLPKYDSAK 400 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAI-REFSYNDYYN 364 P+ IG F + Y N + F+G I P + + + ++ +E Y Sbjct: 401 PLYIG----FFNTGAYQDNI-SGFDGVHHCLIPQPKYILIDENYQVEVFYQEQDYQSVLK 455 Query: 365 NL 366 L Sbjct: 456 KL 457 >gi|254441493|ref|ZP_05054986.1| hypothetical protein OA307_908 [Octadecabacter antarcticus 307] gi|198251571|gb|EDY75886.1| hypothetical protein OA307_908 [Octadecabacter antarcticus 307] Length = 93 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 2/59 (3%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66 ++D +++ A + A+K A L ++S E+ LG Sbjct: 8 VMDLNRVVQQYHALKAGLGAAD--IHYAVKANPAPETIARLVDLGSHFDAASRGEIELG 64 >gi|312383524|gb|EFR28580.1| hypothetical protein AND_03314 [Anopheles darlingi] Length = 1312 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 18/43 (41%) Query: 304 GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346 + +IGD I F+++ Y + FNG T+ V Sbjct: 3 CQDVDFPEHQIGDYIVFDNLGAYGMVLATNFNGFPKATVQVYR 45 >gi|158145245|gb|ABW21854.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ + GLR +S + + G + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|158145231|gb|ABW21847.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ + GLR +S + + G + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|158145225|gb|ABW21844.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ + GLR +S + + G + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|158145199|gb|ABW21831.1| putative arginine decarboxylase [Solanum chilense] gi|158145203|gb|ABW21833.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVARKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|92112677|ref|YP_572605.1| arginine decarboxylase [Chromohalobacter salexigens DSM 3043] gi|91795767|gb|ABE57906.1| arginine decarboxylase [Chromohalobacter salexigens DSM 3043] Length = 633 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 31/319 (9%), Positives = 86/319 (26%), Gaps = 50/319 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-----NQY 51 P + L + ++ +A G + +K + + + + Sbjct: 61 PVLVRFTDILHDRVERLCGAFDSAMHDEAYHGGYTAVYPIKVNQQRRVVEEILATQARGH 120 Query: 52 M-DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQ 103 G + S E++ L G N + L + ++ S+ Sbjct: 121 GRVGLEAGSKPELLAVLALSGDGPSLIVCNGYKDREYVRLALMGEKLGHRVYLVVEKHSE 180 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK------ 156 L ++A++L + + +S + G ++ + Sbjct: 181 LTLILEEARRLDVTPRIGLRARLSSVGKGKWQNTGGEKSKFGLTASQILDVVERLDAAGA 240 Query: 157 --NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---- 207 ++ + FH + + + ++ + +GGG+ + Sbjct: 241 LASLQLVHFHLGSQIANIRDIQRGLRECARFYQSLRALGAPVDTVDVGGGLGVDYEGTRS 300 Query: 208 ------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISEN 254 +Y + ++ + + + E G A+ + L T V+ Sbjct: 301 RSFCSINYSMHEYASNVVWAFRQICDAENLPHPHLISESGRALTAHHAVLITNVIGEERL 360 Query: 255 IKNLVIVDSSVEAHVPDYL 273 +A + + Sbjct: 361 SDTPPERRLEGDAELDELW 379 >gi|61967684|gb|AAX56864.1| putative arginine decarboxylase [Solanum chilense] gi|61967688|gb|AAX56866.1| putative arginine decarboxylase [Solanum chilense] gi|61967692|gb|AAX56868.1| putative arginine decarboxylase [Solanum chilense] gi|61967696|gb|AAX56870.1| putative arginine decarboxylase [Solanum chilense] gi|61967698|gb|AAX56871.1| putative arginine decarboxylase [Solanum chilense] gi|158145195|gb|ABW21829.1| putative arginine decarboxylase [Solanum chilense] gi|158145197|gb|ABW21830.1| putative arginine decarboxylase [Solanum chilense] gi|158145201|gb|ABW21832.1| putative arginine decarboxylase [Solanum chilense] gi|158145205|gb|ABW21834.1| putative arginine decarboxylase [Solanum chilense] gi|158145213|gb|ABW21838.1| putative arginine decarboxylase [Solanum chilense] gi|158145217|gb|ABW21840.1| putative arginine decarboxylase [Solanum chilense] gi|158145223|gb|ABW21843.1| putative arginine decarboxylase [Solanum chilense] gi|158145235|gb|ABW21849.1| putative arginine decarboxylase [Solanum chilense] gi|158145239|gb|ABW21851.1| putative arginine decarboxylase [Solanum chilense] gi|158145249|gb|ABW21856.1| putative arginine decarboxylase [Solanum chilense] gi|158145255|gb|ABW21859.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ + GLR +S + + G + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|317455852|gb|ADV29018.1| arginine decarboxylase [Solanum habrochaites] gi|317455862|gb|ADV29023.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDVEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|3915016|sp|Q96412|SPE1_DIACA RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC gi|1575499|gb|AAB67887.1| arginine decarboxylase [Dianthus caryophyllus] Length = 725 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 70/236 (29%), Gaps = 33/236 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L + L++ + + + +KC + + + ++ G Sbjct: 116 PVIIRFPDVLKHRLESLQSAFDFAVRTHGYGSHYQGVYPVKCNQDRYIVEDIVEFGSGFR 175 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL--NKF 107 + S E+++ K ++ +KD E ++ + NTV + + Sbjct: 176 FGLEAGSKPELLMAMSSLCKGSPDSLLVCNGFKDAEYISLAIIGRKLGLNTVIVIEQEEE 235 Query: 108 KDKAQKLHKKIGLRINPSVSY-----SKFILADPNRPFSRLGEKCKDKIESEI------- 155 D A +L +K+G+R V + + G + Sbjct: 236 VDMAIELSRKMGIRPVVGVRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLENFGM 295 Query: 156 -KNVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + A + E + I +GGG+ Sbjct: 296 LDCLQLLHFHIGSQIPTTTLLSDGVAEASQVYCELTRLGAHMRVIDIGGGLGIDYD 351 >gi|119471405|ref|ZP_01613877.1| arginine decarboxylase [Alteromonadales bacterium TW-7] gi|119445681|gb|EAW26965.1| arginine decarboxylase [Alteromonadales bacterium TW-7] Length = 515 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 85/308 (27%), Gaps = 46/308 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLN--QYMD 53 P + L N +DT A + +K + L + Sbjct: 60 PVLVRFTDILKNRVDTLTNAFTKARSNREYNGKYTCVYPIKVNQQRSVVSKLLAHPSGLV 119 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 G + S E+M YKD E + + + + K + Sbjct: 120 GLEAGSKPELMAILGVAKEPITIVCNGYKDSEFLRLACIGQAMGHSVKIVVEKLSELTTL 179 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158 L + L I P+ S K + + G + + + Sbjct: 180 LEEIDNLGIEPAIGIRIRLNSVGKGKWQNTGGEKGKFGLTAGQVLSAVEVLKKHNKLHLM 239 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 + FH + + L+ + F + + +GGG+ + Sbjct: 240 QMVHFHIGSQIANIRDIHRALRECARHFAELTQLGVPLNTVDVGGGLGVDYEGSGSRSAC 299 Query: 208 --DYPVKDFC-------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 +Y V+++ + + + I E G A+ + L T V+D+ + +L Sbjct: 300 SMNYTVEEYARNVVNAFAEVCDQHDLTHPAIITESGRALTAHHAVLITDVIDVEKAPNHL 359 Query: 259 VIVDSSVE 266 Sbjct: 360 NPEPPLEN 367 >gi|224613246|gb|ACN60202.1| Antizyme inhibitor 1 [Salmo salar] Length = 299 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 78/264 (29%), Gaps = 29/264 (10%) Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 L++ S + + + + + V G+ FH +S Sbjct: 2 LLQVATEASSEGDEMGMAFGSKLKDCRHLLESAKEQGLQVVGVRFHIPSSCDDPQAYSHA 61 Query: 179 LKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYL-E 232 + + F + + +GGG + ++ + L + S + E Sbjct: 62 VSDARCVFDMGEDIGFSMTLLDIGGGFNGSETQLKQINSAVRPLLDLYFPASSGVSIMAE 121 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------VPDYLLYQESATIYPN 284 PG V+++ TL ++ ++L + + D + ++ + N Sbjct: 122 PGSYYVSSSFTLAVNIIAKEVGARDLHGNHDEPSPNDEPEFLYYMNDGVYGSFTSKLADN 181 Query: 285 TGPYTA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330 P A + G S D + + +GD + F + Y++ Sbjct: 182 VIPAPALPKSGVSEDPVFASSLWGPSGDELDQVVDQCLLPELSVGDWLIFNNAGAYSLGP 241 Query: 331 KNWFNGINMPTIAV-KNVDGTIKA 353 + F P + + + Sbjct: 242 PSTFTESPRPPVYYTISTGDWFEM 265 >gi|317455890|gb|ADV29037.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 69/237 (29%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVWKLKESG 244 Query: 156 --KNVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + + + E + +I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTQLLADGVGEAAQVYSELVRLGAGMNFIDIGGGLGIDYD 301 >gi|77164082|ref|YP_342607.1| arginine decarboxylase [Nitrosococcus oceani ATCC 19707] gi|254435104|ref|ZP_05048611.1| arginine decarboxylase [Nitrosococcus oceani AFC27] gi|76882396|gb|ABA57077.1| arginine decarboxylase [Nitrosococcus oceani ATCC 19707] gi|207088215|gb|EDZ65487.1| arginine decarboxylase [Nitrosococcus oceani AFC27] Length = 629 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 71/297 (23%), Gaps = 46/297 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL---NQYMD 53 P + L + + A + +K + + + Sbjct: 62 PVLVRFSGILHHRAKSLRTAFTKAMTATHYQGFFSAVYPIKVNQQRQVIQEILAADSEHL 121 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKF 107 G + S E++ YKD E + ++ S+L Sbjct: 122 GLEAGSKPELLAVMALSRPGALVICNGYKDREYIRLALMGRQLGLRIYLVVEKPSELEHI 181 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 +AQ L + L + ++ + G + + + Sbjct: 182 IHQAQALKVEPLLGVRVRLASIGKGKWQNTGGEKGKFGLSAEQVLMMIQRLRQIGMLHCL 241 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + +GGG+ Sbjct: 242 TLLHFHMGSQLPNIADIQRGIREAGRYYATLRELGVPLRSVDVGGGLGVDYDGTHTRGLC 301 Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 L E E + +I E G A+V + L + ++DI Sbjct: 302 STNYTLPEYAHKIVHGLWEICEAHQLPHPEIITEAGRAMVAHHAILISNIIDIQPAP 358 >gi|84468436|dbj|BAE71301.1| putative arginine decarboxylase [Trifolium pratense] Length = 729 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 28/236 (11%), Positives = 65/236 (27%), Gaps = 33/236 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ + + + +KC + + + ++ G Sbjct: 118 PLVVRFPDVLKNRLESIQGAFDGAIQLQGYESHYQGVYPVKCNQDRFVVEDIVEFGSGFR 177 Query: 56 ---TSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L E +KD E ++ I+ + Sbjct: 178 FGLEAGSKPELLLAMSCLCKGNREAFLICNGFKDSEYISLALVARKLALNTVIVLEQEEE 237 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SE 154 L+ + + KL + + + + + G + Sbjct: 238 LDMVVEISNKLCIRPVIGVRAKLRTKHSGHFGSTSGDKGKFGLTTIQILRVVKKLEQLDM 297 Query: 155 IKNVNGLMFHNNCENKSFL---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + + L FH + + I E Q+ + +GGG+ Sbjct: 298 LDCLQLLHFHIGSQIPTTELLADGVGEAAQIYCELLRLGAQMRVLDIGGGLGIDYD 353 >gi|84468336|dbj|BAE71251.1| putative arginine decarboxylase [Trifolium pratense] Length = 729 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 28/236 (11%), Positives = 65/236 (27%), Gaps = 33/236 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ + + + +KC + + + ++ G Sbjct: 118 PLVVRFPDVLKNRLESIQGAFDGAIQLQGYESHYQGVYPVKCNQDRFVVEDIVEFGSGFR 177 Query: 56 ---TSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L E +KD E ++ I+ + Sbjct: 178 FGLEAGSKPELLLAMSCLCKGNREAFLICNGFKDSEYISLALVARKLALNTVIVLEQEEE 237 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SE 154 L+ + + KL + + + + + G + Sbjct: 238 LDMVVEISNKLCIRPVIGVRAKLRTKHSGHFGSTSGDKGKFGLTTIQILRVVKKLEQLDM 297 Query: 155 IKNVNGLMFHNNCENKSFL---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + + L FH + + I E Q+ + +GGG+ Sbjct: 298 LDCLQLLHFHIGSQIPTTELLADGVGEAAQIYCELLRLGAQMRVLDIGGGLGIDYD 353 >gi|317456006|gb|ADV29095.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|317455998|gb|ADV29091.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|317455990|gb|ADV29087.1| arginine decarboxylase [Solanum arcanum] gi|317455994|gb|ADV29089.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|317455930|gb|ADV29057.1| arginine decarboxylase [Solanum habrochaites] gi|317455932|gb|ADV29058.1| arginine decarboxylase [Solanum habrochaites] gi|317455934|gb|ADV29059.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|317455900|gb|ADV29042.1| arginine decarboxylase [Solanum habrochaites] gi|317455902|gb|ADV29043.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|317455898|gb|ADV29041.1| arginine decarboxylase [Solanum habrochaites] gi|317455910|gb|ADV29047.1| arginine decarboxylase [Solanum habrochaites] gi|317455914|gb|ADV29049.1| arginine decarboxylase [Solanum habrochaites] gi|317455926|gb|ADV29055.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|317455880|gb|ADV29032.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|158145227|gb|ABW21845.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSERYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|158145209|gb|ABW21836.1| putative arginine decarboxylase [Solanum chilense] gi|158145215|gb|ABW21839.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|158145189|gb|ABW21826.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|158145177|gb|ABW21820.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|158145173|gb|ABW21818.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|158145127|gb|ABW21795.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145129|gb|ABW21796.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145131|gb|ABW21797.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145133|gb|ABW21798.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145135|gb|ABW21799.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145139|gb|ABW21801.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145141|gb|ABW21802.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145143|gb|ABW21803.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145145|gb|ABW21804.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145147|gb|ABW21805.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145149|gb|ABW21806.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145151|gb|ABW21807.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145159|gb|ABW21811.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145163|gb|ABW21813.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145167|gb|ABW21815.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|73808422|gb|AAZ85211.1| arginine decarboxylase [Solanum chmielewskii] gi|73808424|gb|AAZ85212.1| arginine decarboxylase [Solanum chmielewskii] gi|73808426|gb|AAZ85213.1| arginine decarboxylase [Solanum chmielewskii] gi|73808428|gb|AAZ85214.1| arginine decarboxylase [Solanum chmielewskii] gi|73808430|gb|AAZ85215.1| arginine decarboxylase [Solanum chmielewskii] gi|73808432|gb|AAZ85216.1| arginine decarboxylase [Solanum chmielewskii] gi|73808434|gb|AAZ85217.1| arginine decarboxylase [Solanum chmielewskii] gi|73808436|gb|AAZ85218.1| arginine decarboxylase [Solanum chmielewskii] gi|73808438|gb|AAZ85219.1| arginine decarboxylase [Solanum chmielewskii] gi|73808440|gb|AAZ85220.1| arginine decarboxylase [Solanum chmielewskii] gi|317455976|gb|ADV29080.1| arginine decarboxylase [Solanum arcanum] gi|317455986|gb|ADV29085.1| arginine decarboxylase [Solanum arcanum] gi|317455988|gb|ADV29086.1| arginine decarboxylase [Solanum arcanum] gi|317455992|gb|ADV29088.1| arginine decarboxylase [Solanum arcanum] gi|317455996|gb|ADV29090.1| arginine decarboxylase [Solanum arcanum] gi|317456000|gb|ADV29092.1| arginine decarboxylase [Solanum arcanum] gi|317456002|gb|ADV29093.1| arginine decarboxylase [Solanum arcanum] gi|317456004|gb|ADV29094.1| arginine decarboxylase [Solanum arcanum] gi|317456008|gb|ADV29096.1| arginine decarboxylase [Solanum arcanum] gi|317456010|gb|ADV29097.1| arginine decarboxylase [Solanum arcanum] gi|317456012|gb|ADV29098.1| arginine decarboxylase [Solanum arcanum] gi|317456014|gb|ADV29099.1| arginine decarboxylase [Solanum arcanum] gi|317456016|gb|ADV29100.1| arginine decarboxylase [Solanum arcanum] gi|317456018|gb|ADV29101.1| arginine decarboxylase [Solanum arcanum] gi|317456020|gb|ADV29102.1| arginine decarboxylase [Solanum arcanum] gi|317456024|gb|ADV29104.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|61967666|gb|AAX56855.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|61967670|gb|AAX56857.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145137|gb|ABW21800.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145153|gb|ABW21808.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145155|gb|ABW21809.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145157|gb|ABW21810.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145165|gb|ABW21814.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145169|gb|ABW21816.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145181|gb|ABW21822.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145221|gb|ABW21842.1| putative arginine decarboxylase [Solanum chilense] gi|317455978|gb|ADV29081.1| arginine decarboxylase [Solanum arcanum] gi|317455982|gb|ADV29083.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|61967672|gb|AAX56858.1| putative arginine decarboxylase [Solanum peruvianum] gi|61967676|gb|AAX56860.1| putative arginine decarboxylase [Solanum peruvianum] gi|61967680|gb|AAX56862.1| putative arginine decarboxylase [Solanum peruvianum] gi|61967686|gb|AAX56865.1| putative arginine decarboxylase [Solanum chilense] gi|61967690|gb|AAX56867.1| putative arginine decarboxylase [Solanum chilense] gi|61967694|gb|AAX56869.1| putative arginine decarboxylase [Solanum chilense] gi|61967700|gb|AAX56872.1| putative arginine decarboxylase [Solanum chilense] gi|61967702|gb|AAX56873.1| putative arginine decarboxylase [Solanum chilense] gi|158145171|gb|ABW21817.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145179|gb|ABW21821.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145185|gb|ABW21824.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145193|gb|ABW21828.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145211|gb|ABW21837.1| putative arginine decarboxylase [Solanum chilense] gi|158145219|gb|ABW21841.1| putative arginine decarboxylase [Solanum chilense] gi|158145233|gb|ABW21848.1| putative arginine decarboxylase [Solanum chilense] gi|158145241|gb|ABW21852.1| putative arginine decarboxylase [Solanum chilense] gi|158145251|gb|ABW21857.1| putative arginine decarboxylase [Solanum chilense] gi|158145253|gb|ABW21858.1| putative arginine decarboxylase [Solanum chilense] gi|158145257|gb|ABW21860.1| putative arginine decarboxylase [Solanum chilense] gi|317455952|gb|ADV29068.1| arginine decarboxylase [Solanum arcanum] gi|317455954|gb|ADV29069.1| arginine decarboxylase [Solanum arcanum] gi|317455956|gb|ADV29070.1| arginine decarboxylase [Solanum arcanum] gi|317455958|gb|ADV29071.1| arginine decarboxylase [Solanum arcanum] gi|317455960|gb|ADV29072.1| arginine decarboxylase [Solanum arcanum] gi|317455962|gb|ADV29073.1| arginine decarboxylase [Solanum arcanum] gi|317455964|gb|ADV29074.1| arginine decarboxylase [Solanum arcanum] gi|317455966|gb|ADV29075.1| arginine decarboxylase [Solanum arcanum] gi|317455970|gb|ADV29077.1| arginine decarboxylase [Solanum arcanum] gi|317455972|gb|ADV29078.1| arginine decarboxylase [Solanum arcanum] gi|317455974|gb|ADV29079.1| arginine decarboxylase [Solanum arcanum] gi|317455980|gb|ADV29082.1| arginine decarboxylase [Solanum arcanum] gi|317455984|gb|ADV29084.1| arginine decarboxylase [Solanum arcanum] gi|317456022|gb|ADV29103.1| arginine decarboxylase [Solanum arcanum] gi|317456026|gb|ADV29105.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|61967712|gb|AAX56878.1| putative arginine decarboxylase [Solanum habrochaites] gi|317455876|gb|ADV29030.1| arginine decarboxylase [Solanum habrochaites] gi|317455892|gb|ADV29038.1| arginine decarboxylase [Solanum habrochaites] gi|317455894|gb|ADV29039.1| arginine decarboxylase [Solanum habrochaites] gi|317455896|gb|ADV29040.1| arginine decarboxylase [Solanum habrochaites] gi|317455904|gb|ADV29044.1| arginine decarboxylase [Solanum habrochaites] gi|317455906|gb|ADV29045.1| arginine decarboxylase [Solanum habrochaites] gi|317455908|gb|ADV29046.1| arginine decarboxylase [Solanum habrochaites] gi|317455912|gb|ADV29048.1| arginine decarboxylase [Solanum habrochaites] gi|317455916|gb|ADV29050.1| arginine decarboxylase [Solanum habrochaites] gi|317455918|gb|ADV29051.1| arginine decarboxylase [Solanum habrochaites] gi|317455920|gb|ADV29052.1| arginine decarboxylase [Solanum habrochaites] gi|317455922|gb|ADV29053.1| arginine decarboxylase [Solanum habrochaites] gi|317455924|gb|ADV29054.1| arginine decarboxylase [Solanum habrochaites] gi|317455928|gb|ADV29056.1| arginine decarboxylase [Solanum habrochaites] gi|317455936|gb|ADV29060.1| arginine decarboxylase [Solanum habrochaites] gi|317455938|gb|ADV29061.1| arginine decarboxylase [Solanum habrochaites] gi|317455940|gb|ADV29062.1| arginine decarboxylase [Solanum habrochaites] gi|317455942|gb|ADV29063.1| arginine decarboxylase [Solanum habrochaites] gi|317455944|gb|ADV29064.1| arginine decarboxylase [Solanum habrochaites] gi|317455946|gb|ADV29065.1| arginine decarboxylase [Solanum habrochaites] gi|317455948|gb|ADV29066.1| arginine decarboxylase [Solanum habrochaites] gi|317455950|gb|ADV29067.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|61967716|gb|AAX56880.1| putative arginine decarboxylase [Solanum habrochaites] gi|317455878|gb|ADV29031.1| arginine decarboxylase [Solanum habrochaites] gi|317455884|gb|ADV29034.1| arginine decarboxylase [Solanum habrochaites] gi|317455886|gb|ADV29035.1| arginine decarboxylase [Solanum habrochaites] gi|317455888|gb|ADV29036.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|61967682|gb|AAX56863.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|61967668|gb|AAX56856.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDCAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|61967674|gb|AAX56859.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEEYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|61967664|gb|AAX56854.1| putative arginine decarboxylase [Solanum peruvianum] gi|61967678|gb|AAX56861.1| putative arginine decarboxylase [Solanum peruvianum] gi|73808452|gb|AAZ85226.1| arginine decarboxylase [Solanum pimpinellifolium] gi|158145161|gb|ABW21812.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145175|gb|ABW21819.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145183|gb|ABW21823.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145187|gb|ABW21825.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145191|gb|ABW21827.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|297193993|ref|ZP_06911391.1| lysine/ornithine decarboxylase [Streptomyces pristinaespiralis ATCC 25486] gi|297152049|gb|EFH31499.1| lysine/ornithine decarboxylase [Streptomyces pristinaespiralis ATCC 25486] Length = 319 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 60/191 (31%), Gaps = 17/191 (8%) Query: 27 NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAY-NVAYKDC 84 +A V A+K + L+ G +S E+ L + + A Sbjct: 129 DAPVLHAFAVKAAPLVPVLALLHAEGIGAEVASPGELALARAAGLPAGSIVLDSPAKTVA 188 Query: 85 EIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADPNRPFSR 142 E+ L + + +L + D A +GLR+N V P S+ Sbjct: 189 ELREALDLGIAVNADNWQELARIDDLVAAGPTASPLGLRVNAQVGGGSIGALSTATPTSK 248 Query: 143 LGEKCKD--------KIESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFI 190 G +D + E + L H+ + + A+ + E+ Sbjct: 249 FGVTLRDEGARDRVVRACLERPWLTRLHTHSGSQGMALTRMTEGVLAVYELAEEINAAAG 308 Query: 191 -TQIEWISLGG 200 Q + I +GG Sbjct: 309 RRQFDTIDIGG 319 >gi|270158389|ref|ZP_06187046.1| arginine decarboxylase [Legionella longbeachae D-4968] gi|289163366|ref|YP_003453504.1| biosynthetic arginine decarboxylase [Legionella longbeachae NSW150] gi|269990414|gb|EEZ96668.1| arginine decarboxylase [Legionella longbeachae D-4968] gi|288856539|emb|CBJ10334.1| putative biosynthetic arginine decarboxylase [Legionella longbeachae NSW150] Length = 632 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 90/339 (26%), Gaps = 52/339 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQ---YMD 53 P + L + + A KL+ +K + L + + Sbjct: 58 PLLIRSPDILHDRVHRIYEAFTQAKEENEYAGNYKLVYPIKVNQEQSVVRELLKSPNHTI 117 Query: 54 GTTSSSLYEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 G + S E+M E+ YKD + + K + A Sbjct: 118 GLEAGSKPELMAVIGMLSNHQESTIVCNGYKDSYYIRTALIAQQMGHKVFIVIEKISELA 177 Query: 112 QKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIK 156 L + L I P+ +S S S+ G K + + Sbjct: 178 IILKESARLNIKPTLGVRIRLISKSAGKWEHTGGVKSKFGLNAKQVLELIAQLKAHDMLD 237 Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 + + H + + ++ E I+ I +GGG+ + Sbjct: 238 CLQLMHCHLGSQIANIHDIRHCMQEVSRYYVELRQLNAPIDTIDVGGGLSVDYEGTHSNQ 297 Query: 214 FCQ--------------RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDIS--EN 254 C ++ ++Y+ I E G A+ + L + DI Sbjct: 298 GCSMNYSLHEYATHILLAIQYLCQEYNVPEPNIISESGRALTAHHAVLIADISDIEIIHK 357 Query: 255 IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293 L + S + D +Y +I + Sbjct: 358 QPTLPEITSEDSHVIRD--IYDTYQSITNSAPIEIYNYA 394 >gi|261345670|ref|ZP_05973314.1| arginine 2-monooxygenase [Providencia rustigianii DSM 4541] gi|282566153|gb|EFB71688.1| arginine 2-monooxygenase [Providencia rustigianii DSM 4541] Length = 634 Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 75/262 (28%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 63 PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQQRRVIESLVNSGEPLG 122 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L + N I L + ++ +S++ Sbjct: 123 LEAGSKAELMAVLANAGRTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIEMV 182 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 +A++L+ L + ++ + + G ++ ++ Sbjct: 183 LKEAERLNVTPRLGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLVEILRNANRLDSL 242 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E IE +GGG+ + + C Sbjct: 243 QLLHFHLGSQMANIRDIATGVREAARFYVELHQLGVNIECFDVGGGLGVDYEGTRSQSDC 302 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ + G+A Sbjct: 303 S-VNYGLNEYANNVIWAIGDAC 323 >gi|73808420|gb|AAZ85210.1| arginine decarboxylase [Solanum ochranthum] Length = 444 Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|15805278|ref|NP_293967.1| arginine decarboxylase [Deinococcus radiodurans R1] gi|46397735|sp|Q9RXR4|SPEA_DEIRA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|6457912|gb|AAF09826.1|AE001885_10 arginine decarboxylase [Deinococcus radiodurans R1] Length = 662 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 31/277 (11%), Positives = 80/277 (28%), Gaps = 44/277 (15%) Query: 19 DTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHE-K 69 + +K + +T+ G + S E+ L K Sbjct: 104 EAFQAAINEYNYSGHYQGVFPIKVNQRRAVVETVAAAGYDYAHGLEAGSKAELALCLAQK 163 Query: 70 FGGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + +KD L I ++L++ +A+ L K + + Sbjct: 164 MHPDALLCCNGFKDDGFIKLALWGRTLGKNVVITIEKFTELDRILKQAKALGVKPAVGVR 223 Query: 124 PSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLC 174 + + + + G + + + + ++ L H + Sbjct: 224 FKLHARGSGQWEESGGDQAKFGLNAYELLRVVERLKEENMLDSLVMLHTHIGSQITDIRR 283 Query: 175 FSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK----------DYPVKDFCQRLKEF 221 ++ + + ++++++GGG+ +Y VK++ + Sbjct: 284 VKVAVREAAQTYAGLIAAGADLKYLNVGGGLGVDYDGSKTTFYASMNYTVKEYAADIVYT 343 Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251 ++ I E G A+ + L V+D+ Sbjct: 344 VQEVCKAREVPEPVIVSESGRALTAHHAVLILPVVDV 380 >gi|12229969|sp|O82475|SPE1_BRAJU RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC gi|3342902|gb|AAC62017.1| arginine decarboxylase [Brassica juncea] Length = 702 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 82/278 (29%), Gaps = 36/278 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ + + + + +KC + + + ++ Sbjct: 101 PLIVRFPDVLKNRLESLQSAFEFAIQTQGYESRYQGVYPVKCNQDRFIIEDIVEFGSSFR 160 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L E +KD E ++ I+ + Sbjct: 161 FGLEAGSKPEILLAMSCLCKGSPEAFLVCNGFKDAEYVSLALLGRKLQLNTVIVLEQEEE 220 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ ++K++ + GLR +S + + G I Sbjct: 221 LDLVIALSKKVNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTVQIIRVVRKLRDVG 279 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + L FH + S + + E ++E I +GGG+ Sbjct: 280 MLDCLQLLHFHIGSQIPSTALLSDGVSEAAQLYCELVRLGARMEVIDIGGGLGIDYDGSK 339 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 + + E+Y+ + + + + + Sbjct: 340 SGESDLSVAYSLEEYA-AAVVASVRFVCDQKSVKHPVI 376 >gi|88810930|ref|ZP_01126186.1| Arginine decarboxylase [Nitrococcus mobilis Nb-231] gi|88791469|gb|EAR22580.1| Arginine decarboxylase [Nitrococcus mobilis Nb-231] Length = 639 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 34/286 (11%), Positives = 72/286 (25%), Gaps = 42/286 (14%) Query: 12 QKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTL---NQYMDGTTSSSLYEVM 64 ++ G + +K + + G S E+M Sbjct: 72 DRVERLCRAFRQAMITHGYAGSYTAVYPIKVNQQRRVVQEILAGADNHVGLECGSKPELM 131 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 YKD E + + + + K + + + L + P Sbjct: 132 GAIAVAPPGGRIICNGYKDREYIRLALRSRQLGLDCWIVVEKCSELELIIAESRRLGVEP 191 Query: 125 S-------VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCEN 169 S + + S+ G + + ++ L FH + Sbjct: 192 RLGLRVRLASIGEGKWQNTGGEKSKFGLSAAQALAVVERLRAVDRLASLQMLHFHLGSQI 251 Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----------DYPVKDFCQ 216 + E I + +GGG+ + +Y V+++ Sbjct: 252 PNIADIQRGIREAARYYVELHRLGAPIGCVDVGGGLGVDYEGTRSRSFCSMNYTVEEYAH 311 Query: 217 RLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + + I E G A+ + L T V+D+ Sbjct: 312 NIVHTLGELASAAGLDHPDIVTESGRAMTAHHAVLITDVVDVDRIP 357 >gi|158145247|gb|ABW21855.1| putative arginine decarboxylase [Solanum chilense] gi|158145261|gb|ABW21862.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGVLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ + GLR +S + + G + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|94985871|ref|YP_605235.1| arginine decarboxylase [Deinococcus geothermalis DSM 11300] gi|94556152|gb|ABF46066.1| arginine decarboxylase [Deinococcus geothermalis DSM 11300] Length = 706 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 33/277 (11%), Positives = 74/277 (26%), Gaps = 44/277 (15%) Query: 19 DTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHE-K 69 + G +K + +T+ G + S E+ L K Sbjct: 149 EAFRQAIAEYGYSGHYQGVFPIKVNQRRVVVETIAAAGYEYAHGLEAGSKAELALCLAQK 208 Query: 70 FGGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 +KD L I S+L + +A+ L K + + Sbjct: 209 LNPNALLCCNGFKDDGFIKLALWGRTLGKNVVITIEKFSELERILKQARALGVKPAIGVR 268 Query: 124 PSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLC 174 + + + + G + + + + + L H + Sbjct: 269 FKLHARGSGQWEESGGDQAKFGLNAYELLRVVERLREENMLDALVMLHTHIGSQITDIRR 328 Query: 175 FSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK-----------------DYPVKDF 214 ++ + + +++++++GGG+ V Sbjct: 329 IKVAVREATQTYAGLIAAGARLKYLNVGGGLGVDYDGSKTTFYASMNYTVAEYAADVVYT 388 Query: 215 CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 Q + E I E G A+ + L V+D+ Sbjct: 389 VQEVCRAREVPEPTIVSESGRALTAHHAVLVMPVVDV 425 Score = 39.7 bits (91), Expect = 0.76, Method: Composition-based stats. Identities = 12/100 (12%), Positives = 22/100 (22%), Gaps = 24/100 (24%) Query: 292 VCGRSCLAGDIFGEFHFEKPVK-------IGD---RISFEDVAGYNINRKNWFNGINMPT 341 + +C + +F + VK GD + + Y + N Sbjct: 566 IVDITCDSDGKIEKFIDLRDVKATLPLHEPGDRPYYLGVFLMGAYQDVLGSAHNLFGKVN 625 Query: 342 IA--------------VKNVDGTIKAIREFSYNDYYNNLS 367 A + I Y + S Sbjct: 626 EAHVTVRPGGKFHIDLFVRGQKARRMIESMGYEEIMLRDS 665 >gi|2183223|gb|AAB60880.1| arginine decarboxylase [Dianthus caryophyllus] Length = 725 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 71/236 (30%), Gaps = 33/236 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L + L++ + + + +KC + + + ++ G Sbjct: 116 PVIIRFPDVLKHRLESLQSAFDFAVRTHGYGSHYQGVYPVKCNQDRYIVEDIVEFGSGFR 175 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL--NKF 107 + S E+++ K ++ +KD E ++ + NTV + + Sbjct: 176 FGLEAGSKPELLMAMSSLCKGSPDSLLVCNGFKDAEYISLAIIGRKLGLNTVIVIEQEEE 235 Query: 108 KDKAQKLHKKIGLRINPSVSY-----SKFILADPNRPFSRLGEKCKDKIESEI------- 155 D A +L +K+G+R V + + G + Sbjct: 236 VDMAIELSRKMGIRPVVGVRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLESFGM 295 Query: 156 -KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + + A + E + I +GGG+ Sbjct: 296 LDCLQLLHFHIGSQIPTTALLSDGVAEASQVYCELTRLGAHMRVIDIGGGLGIDYD 351 >gi|238921231|ref|YP_002934746.1| arginine decarboxylase [Edwardsiella ictaluri 93-146] gi|238870800|gb|ACR70511.1| biosynthetic arginine decarboxylase (ADC) [Edwardsiella ictaluri 93-146] Length = 658 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 33/265 (12%), Positives = 78/265 (29%), Gaps = 30/265 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + + L+ +K + ++L G Sbjct: 87 PALFCFPQILQHRLRSINAAFQCARASFGYQGDYFLVYPIKVNQQRRVIESLVNSGEPLG 146 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I L + ++ +S+++ Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKLSEIDVV 206 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158 ++A++L L + ++ + + G ++ ++++ Sbjct: 207 LEEAKRLDVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAVQVLQLVETLRQAGHLESL 266 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ + G+A + Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEH 350 >gi|221133566|ref|ZP_03559871.1| arginine decarboxylase [Glaciecola sp. HTCC2999] Length = 644 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 66/234 (28%), Gaps = 31/234 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTL----NQYM 52 P + L + + + +K + + + +Y Sbjct: 68 PVVVRFHDVLRAQVVHLNKAFNKCIQEANYQGQYRGVYPVKVNQMREVVEEIVDAGKEYH 127 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105 G + S E++ E YKD E + I+ S++ Sbjct: 128 YGLEAGSKAELITILAYNTTPEALTVLNGYKDEEFVNLAFLAQKLGRKVLIVVEKFSEIA 187 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIK 156 A +L + + + +S + + + G + I + + Sbjct: 188 TIIKIANELGEMPMIGLRAKMSVKGRGKWEGSGGDRAKFGLTISEIINAGKTLADAGMGE 247 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 ++ L FH + ++ I E H +E++ +GGG+ Sbjct: 248 SLKLLHFHIGSQLTDIRAVKEAINEGALIYAELRHLGFNLEYVDIGGGLGIDYD 301 >gi|1711492|sp|P49726|SPE1_SOLLC RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC gi|295350|gb|AAA61347.1| arginine decarboxylase [Solanum lycopersicum] Length = 502 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L+T A + + +KC + + + ++ Sbjct: 2 PLVVRFPDVLKNRLETLQSAFDMAINSQGYEAHYQGVYPVKCNQDRFVVEDIVKFGSPYR 61 Query: 54 -GTTSSSLYEVMLG---HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E++L K + +KD E ++ ++ N+V L + ++ Sbjct: 62 FGLEAGSKPELLLAMNCLSKGSADALLVCNGFKDTEYISLALVARKLLLNSVIVLEQEEE 121 Query: 110 K--------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 + IGLR +S + + G + Sbjct: 122 LDLVIDISRKMSVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVKKLDESG 180 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + + + + + + +++I +GGG+ Sbjct: 181 MLDCLQLLHFHIGSQIPTTELLADGVGEATQIYSELVRLGAGMKFIDIGGGLGIDYD 237 >gi|86610204|ref|YP_478966.1| arginine decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558746|gb|ABD03703.1| arginine decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 640 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 84/300 (28%), Gaps = 44/300 (14%) Query: 12 QKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 ++ ++ + G + + +K + + + ++ G + S E+ Sbjct: 78 DRMRQICESFQQAIQRFGYPNVYRGVYPVKVNQQRHLVEEVVKHGRAYHFGLEAGSKPEL 137 Query: 64 MLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLHK 116 ++ YKD + I+ + +L A +L Sbjct: 138 LIALALLDTPGALLICNGYKDRDFMETALLAQRLGRTPIIVLERLQELELVLQAADQLGI 197 Query: 117 KIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNNC 167 L + +S + + G + ++ + L +H Sbjct: 198 DPILGVRAKLSAQGSGRWGTSAGDRAKFGLTATEILQVVERLREAGKLHCLRLLHYHIGS 257 Query: 168 ENKSFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----------DYPVKDF 214 + I E + ++ +GGG+ Y ++D+ Sbjct: 258 QISMVSVHGRAVREASQIYIELVKLGAPMGYLDIGGGLGVDYDGSQSPNPFSQSYSMEDY 317 Query: 215 CQRLKE-------FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA 267 + + + E G A++++ + L V D++ + + +A Sbjct: 318 AATVVQTVLTALEPHGIQPPVLVTESGRALMSHQSVLVFDVQDVNAASPYPMPTQLTSDA 377 >gi|317456028|gb|ADV29106.1| arginine decarboxylase [Solanum arcanum] gi|317456030|gb|ADV29107.1| arginine decarboxylase [Solanum arcanum] gi|317456032|gb|ADV29108.1| arginine decarboxylase [Solanum arcanum] gi|317456034|gb|ADV29109.1| arginine decarboxylase [Solanum arcanum] gi|317456036|gb|ADV29110.1| arginine decarboxylase [Solanum arcanum] gi|317456038|gb|ADV29111.1| arginine decarboxylase [Solanum arcanum] gi|317456040|gb|ADV29112.1| arginine decarboxylase [Solanum arcanum] gi|317456042|gb|ADV29113.1| arginine decarboxylase [Solanum arcanum] gi|317456044|gb|ADV29114.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFG-STSGETGKFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|88799147|ref|ZP_01114727.1| arginine decarboxylase [Reinekea sp. MED297] gi|88778130|gb|EAR09325.1| arginine decarboxylase [Reinekea sp. MED297] Length = 635 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 32/269 (11%), Positives = 80/269 (29%), Gaps = 35/269 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + + K A + L +K + + + + Sbjct: 56 PLLVRFPHILHDRVARINEAFKAAIKIENYQNVYQPLYPIKVNQQRRIVEEIIKGQRLAG 115 Query: 53 ---DGTTSSSLYEVMLGHEKF--GGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E+M + G T N + I L + ++ +S Sbjct: 116 TPRIGLEAGSKPELMAVMAEAARGATTIVCNGYKDEEYIRLALSAEKLGHHVYLVVEKIS 175 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 ++ + A++++ + + +S + + + G + I Sbjct: 176 EVEWILNIAEEMNVLPRIGVRARLSSVGKGKWENSGGEKSKFGLTASEIITITEHLREHD 235 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + L FH + + E H I+ + +GGG+ + Sbjct: 236 RLDSFQLLHFHLGSQIANIRDIQLGLRECARFYVELRHLNVPIDIVDVGGGLGVDYEGTQ 295 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 ++ C + ++Y+ + +A Sbjct: 296 SRESCS-MNYSLQEYANNVVFAFRDACTQ 323 >gi|302030074|gb|ADK91572.1| arginine decarboxylase [Solanum lycopersicum] Length = 502 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 73/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA----GVKLLL----ALKCFAAWGMFDTLNQYMD--- 53 P + L N L+T A G ++ +KC + + + ++ Sbjct: 2 PLVVRFPDVLKNRLETLQSAFDMAINSQGYEVHYQGVYPVKCNQDRFVVEDIVKFGSPYR 61 Query: 54 -GTTSSSLYEVMLG---HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E++L K + +KD E ++ ++ N+V L + ++ Sbjct: 62 FGLEAGSKSELLLAMNCLSKGSADALLVCNGFKDTEYISLALVARKLLLNSVIVLEQEEE 121 Query: 110 K--------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 + IGLR +S + + G + Sbjct: 122 LDLVIDISRKMSVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVLKKLDESG 180 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + + + + + + +++I +GGG+ Sbjct: 181 MLDCLQLLHFHIGSQIPTSELLADGVGEATQIYSELVRLGAGMKFIDIGGGLGIDYD 237 >gi|332995551|gb|AEF05606.1| arginine decarboxylase [Alteromonas sp. SN2] Length = 636 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 31/313 (9%), Positives = 95/313 (30%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L + + + +++ + + +K + + + + Sbjct: 61 PVVVRFHDILRSQVASLNKAFRSSIEEAEYKGLYQGVYPVKVNQMREVVEEIVEAGAPFN 120 Query: 54 -GTTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E++ E YKD E + + + S+L Sbjct: 121 YGLEAGSKAELLTVLAMNTNEDSLTILNGYKDDEFMRLALLGRKLGRKIVVVVEKYSELL 180 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156 +++L+ + + ++ + + + G + I++ Sbjct: 181 LLVKVSKELNIDPIIGVRAKMTVKGRGKWESSGGERAKFGLTITEIIKTARYLEEQGMSH 240 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + L FH + ++ I + ++++ +GGG+ Sbjct: 241 CLKLLHFHIGSQLTDIRAVKEAMTEGARIYADLHKMGFPLDYVDVGGGLGIDYDGSNSTN 300 Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++++ + ++ + E G AI + + + T ++ ++ Sbjct: 301 ESSRNYSMQEYVADVVYGMKEMCDLEGVPHPNLVSESGRAITAHHSCVVTEIVGEIKSNA 360 Query: 257 NLVIVDSSVEAHV 269 + + HV Sbjct: 361 AQIDTSENENEHV 373 >gi|212712731|ref|ZP_03320859.1| hypothetical protein PROVALCAL_03828 [Providencia alcalifaciens DSM 30120] gi|212684647|gb|EEB44175.1| hypothetical protein PROVALCAL_03828 [Providencia alcalifaciens DSM 30120] Length = 634 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 75/262 (28%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 63 PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQQRRVIESLVNSGEPLG 122 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L + N I L + ++ +S++ Sbjct: 123 LEAGSKAELMAVLANAGRTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIEMV 182 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A+KL L + ++ + + G ++ ++ Sbjct: 183 LEEAKKLEVTPRLGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLVEILRNANRLDSL 242 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 243 QLLHFHLGSQMANIRDIATGVRESARFYVELHQLGVNIQCFDVGGGLGVDYEGTRSQSDC 302 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ + G+A Sbjct: 303 S-VNYGLNEYANNVIWAIGDAC 323 >gi|332290904|ref|YP_004429513.1| Orn/DAP/Arg decarboxylase 2 [Krokinobacter diaphorus 4H-3-7-5] gi|332168990|gb|AEE18245.1| Orn/DAP/Arg decarboxylase 2 [Krokinobacter diaphorus 4H-3-7-5] Length = 463 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 47/397 (11%), Positives = 114/397 (28%), Gaps = 61/397 (15%) Query: 13 KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLY--- 61 K+ +N+ + G + K + + +SS + Sbjct: 52 KISDNIQRAKKWFADAIQANGYEGSYNYCYCTKSSHFKHVLNEALSNDIHIETSSAFDID 111 Query: 62 --EVMLGHEKFGGETHAYNVAYKDCEIDAVL----SNCDTIIFNTVSQLNKFKDKAQKLH 115 E + K +T+ + +K + +N + + + +++ Sbjct: 112 IVESLKAAGKITDDTYVISNGFKRERYVENIARLINNGHKNAIPVIDNYEEIDLLSNQIN 171 Query: 116 KKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENK- 170 K + I + +R + + +E + L F N + Sbjct: 172 GKFKVGIRIASEEEPKFEFYTSRLGIGYKNIVPFFNNQIKNNEKVELKMLHFFINTGIRD 231 Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHF-------TDKDYPVKDFCQRLKEF 221 + + ++ +++GGG D Y + + ++K+ Sbjct: 232 TAYYWNELMKCIKVYINLKKICPSLDSLNIGGGFPIKNSLAFEYDYAYMINEIIAQIKQA 291 Query: 222 SEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276 + I+ E G V + VL + +++SS +PD Sbjct: 292 CDDADVKVPNIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNMINSSFITTLPDTWAIN 351 Query: 277 ESATI----YPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEKPVKIGDRISFE 321 + + N ++ G +C + D ++ +KP+ IG F Sbjct: 352 KRFIMLAVNRWNEEYERVLLGGLTCDSDDYYNSEQHMNAIYMPKYKKDKPLYIG----FF 407 Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353 + Y + F G + P + + + + Sbjct: 408 NTGAYQESIG-GFGGLQHCLVPSPKHILIDRNEDGEI 443 >gi|157412394|ref|YP_001483260.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9215] gi|166979641|sp|A8G243|SPEA_PROM2 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|157386969|gb|ABV49674.1| Orn/DAP/Arg decarboxylase family 2 [Prochlorococcus marinus str. MIT 9215] Length = 648 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 100/316 (31%), Gaps = 48/316 (15%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD 53 I TP + L + ++ A + + +KC + + + ++ Sbjct: 66 INTPLIIRFNDILKDRINALHDAFLKAIKTYKYKNIYQGVFPVKCNQQKNVLEKIIEFGS 125 Query: 54 ----GTTSSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCD------TIIFNTVS 102 G S E+++G + YKD + + + I+ Sbjct: 126 PWNFGLEVGSKSELLIGLALLENQNSLLICNGYKDKKYIEIATLARKLGKNPIIVIEQKD 185 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIE--------S 153 ++N+ + Q L+ + I +S + S+ G + + + Sbjct: 186 EVNRIIEAVQDLNASPLIGIRAKLSSKSSGRWSKSVGDNSKFGLSIPEIMSTIKELKEAN 245 Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK--- 207 I + L FH + L+ + + +++I +GGG+ Sbjct: 246 LINEMRLLHFHIGSQISDIAVIKDALQEASQIYVELFKLGAPMKYIDVGGGLGIDFDGTK 305 Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE 253 +Y ++++ + + I E G AI+++ + L VL S Sbjct: 306 TSSNTSTNYSLQNYANDVIATIKDSCELNNIEHPTIISESGRAIISHCSVLIFNVLGTSH 365 Query: 254 NIKNLVIVDSSVEAHV 269 L I D ++ + Sbjct: 366 VSSKLKIYDDKKQSLI 381 >gi|89890104|ref|ZP_01201615.1| arginine decarboxylase [Flavobacteria bacterium BBFL7] gi|89518377|gb|EAS21033.1| arginine decarboxylase [Flavobacteria bacterium BBFL7] Length = 463 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 50/404 (12%), Positives = 115/404 (28%), Gaps = 63/404 (15%) Query: 3 KTPY-YLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMD 53 +P + K+ +N+ A K K + DT Sbjct: 42 GSPLKFTY-LPKISDNIQRAQKWFNDAFAKADYKAKYHYCYCTKSSHFKHVLDTALSNDI 100 Query: 54 GTTSSSLYEV---MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 +SS +++ + + Y ++ + + D I + + + Sbjct: 101 HLETSSAFDIDIIKKLKAEGKIKDDTYIISNGFKREKYIDNIADLINSGHKNCIPIIDNY 160 Query: 111 --------AQKLHKKIGLRINPSVSYSKFILADPNRPFSR--LGEKCKDKIESEIKNVNG 160 K+G+RI + L E++ ++ Sbjct: 161 EELNLLTNVTDKKFKVGIRIASEEEPKFEFYTSRLGIGYKNILSFYKNQIQENQQVSLKM 220 Query: 161 LMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH----------FTDK 207 L F N + + + ++ +++GGG + Sbjct: 221 LHFFINTGIRDNAYYWNELHKCLKVYISLKKICPSLDSLNIGGGFPIKNSLAFEFDYEYM 280 Query: 208 DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSV 265 + + +++ + ++ I+ E G V + VL + +++SS Sbjct: 281 INEIVNQIKQVCDEADVDVPHIFTEFGSFTVGESGGAIYKVLYQKQQNDREKWNMINSSF 340 Query: 266 EAHVPDYLLYQESATI----YPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEK 310 +PD + + N ++ G +C + D ++H +K Sbjct: 341 ITTLPDSWAISKRFIMLALNRWNEEYERVLLGGLTCDSDDYYNSEQNVNAIYLPKYHKDK 400 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDG 349 P+ IG F + Y + + G I P + + D Sbjct: 401 PLYIG----FFNTGAYQESIG-GYGGIQHCLIPAPKHILIDRDE 439 >gi|300113294|ref|YP_003759869.1| arginine decarboxylase [Nitrosococcus watsonii C-113] gi|299539231|gb|ADJ27548.1| arginine decarboxylase [Nitrosococcus watsonii C-113] Length = 629 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 74/309 (23%), Gaps = 46/309 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L + + A + +K + + Sbjct: 62 PVLVRFSGILHHRAQSLRAAFTEAMTATHYQGSFSAVYPIKVNQQRQVIQEILAADSDRL 121 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKF 107 G + S E++ YKD E + ++ S+L Sbjct: 122 GLEAGSKPELLAVMALSRPGALVICNGYKDREYIRLALMGRQLGLRIYLVVEKPSELEHI 181 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158 +AQ L + L + ++ + G + + I + Sbjct: 182 IRQAQALKVEPLLGVRVRLASIGKGKWQNTGGEKGKFGLSAEQVLMMIQRLRQIGMIHCL 241 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + +GGG+ Sbjct: 242 TLLHFHMGSQLPNIADIQRGIREAGRYYATLRELGVPLRSVDVGGGLGVDYDGTHTRGLC 301 Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 L E E + +I E G A+V + L + ++DI Sbjct: 302 STNYTLPEYAHKIVHGLWETCETHQLPHPEIITEAGRAMVAHHAILISNIIDIQPAPGKE 361 Query: 259 VIVDSSVEA 267 +V+ Sbjct: 362 EPPAPAVDD 370 >gi|301062808|ref|ZP_07203406.1| arginine 2-monooxygenase [delta proteobacterium NaphS2] gi|300443070|gb|EFK07237.1| arginine 2-monooxygenase [delta proteobacterium NaphS2] Length = 639 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 79/306 (25%), Gaps = 48/306 (15%) Query: 11 KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58 + L + + A + + +K + + + ++ G + Sbjct: 73 ENILRSQIKELNDSFAAAIQEYGYQGAYRAVYPIKVNQQQQVVEAIARFGSEYHHGLEAG 132 Query: 59 SLYEVMLGHEKF-GGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQLNKFKDKA 111 S E++ E YKD E + + +L+ +++ Sbjct: 133 SKAELIAALSFLDDPEACLICNGYKDREFVDLGLYACRMGLKCFFVVEIPGELDLILERS 192 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLM 162 + L + + + VS + G + + L Sbjct: 193 KALGIRPLIGVRIKVSTQGGGHWMESGGDRSIFGLSITQVLTVVEKLKRCEMLDCFQLLH 252 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK------------ 207 +H + + + + + + + + LGGG+ Sbjct: 253 YHLGSQIPNIRDIRSAVMEACRVYAGLVDEGAPMRYFDLGGGLAVDYDGSNTNYVTSRNY 312 Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 + D + + ++ I E G AIV + L VLD + Sbjct: 313 GLNEYCSDIIESIMSILDEENIPHPTIITETGRAIVAYYSVLLFNVLDSRRFEGEPIPET 372 Query: 263 SSVEAH 268 H Sbjct: 373 LPENTH 378 >gi|33340511|gb|AAQ14851.1|AF321137_1 arginine decarboxylase [Nicotiana tabacum] Length = 721 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 66/237 (27%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ A + + +KC + + + ++ Sbjct: 113 PLVVRFPDVLKNRLESLQSAFDLAVHSQGYGAHYQGVYPVKCNQDRFVVEDIVKFGSPFR 172 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQ 103 G + S E++L E +KD E L I+ + Sbjct: 173 FGLEAGSKPELLLAMSCLCKGSAEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 232 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D + K+ IGLR +S + + G + Sbjct: 233 LDLVIDISHKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVKKLEESG 291 Query: 156 --KNVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + I E +++I +GGG+ Sbjct: 292 MLDCLQLLHFHIGSQIPSTGLLADGVGEAAQIYCELVRLGAGMKFIDIGGGLGIDYD 348 >gi|7230375|gb|AAF42972.1|AF127241_1 arginine decarboxylase 2 [Nicotiana tabacum] Length = 721 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 66/237 (27%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ A + + +KC + + + ++ Sbjct: 113 PLVVRFPDVLKNRLESLQSAFDLAVHSQGYGAHYQGVYPVKCNQDRFVVEDIVKFGSPFR 172 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQ 103 G + S E++L E +KD E L I+ + Sbjct: 173 FGLEAGSKPELLLAMSCLCKGSAEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 232 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D + K+ IGLR +S + + G + Sbjct: 233 LDLVIDISHKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVKKLEESG 291 Query: 156 --KNVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + I E +++I +GGG+ Sbjct: 292 MLDCLQLLHFHIGSQIPSTGLLADGVGEAAQIYCELVRLGAGMKFIDIGGGLGIDYD 348 >gi|296164216|ref|ZP_06846811.1| decarboxylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900432|gb|EFG79843.1| decarboxylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 146 Score = 60.2 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 41/113 (36%), Gaps = 4/113 (3%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 P++++ + NL + +AG++ + A K A Q G ++S E Sbjct: 33 PFHVLFAPRFAQNLKAFTDVIDSAGIQGQVFFAKKANKAGCWLRVCAQVGAGVDAASAPE 92 Query: 63 VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 ++ G + A + + + I + + +L++ A + Sbjct: 93 LVHALSCGVRGSDIVVTGPAKSEQLLWLAARHGCLIAVDALDELDRVIALAHR 145 >gi|330863542|emb|CBX73658.1| hypothetical protein YEW_CV11700 [Yersinia enterocolitica W22703] Length = 111 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 9/89 (10%), Positives = 26/89 (29%), Gaps = 6/89 (6%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 P + D + + + ++ + A K + + +++ S SL E+ Sbjct: 27 PVWAYDGEIITSKINQLWNFDV-----IRFAQKACSNIHILRLMHEQGVKVDSVSLGEIE 81 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSN 92 F + ++ + Sbjct: 82 RALQAGFQPGRNLLRLSLPPICWIRLPYC 110 >gi|328950147|ref|YP_004367482.1| Biosynthetic arginine decarboxylase [Marinithermus hydrothermalis DSM 14884] gi|328450471|gb|AEB11372.1| Biosynthetic arginine decarboxylase [Marinithermus hydrothermalis DSM 14884] Length = 630 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 29/303 (9%), Positives = 76/303 (25%), Gaps = 44/303 (14%) Query: 11 KQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM----DGTTSSSLYE 62 + ++ + G + +K + +T+ + G + S E Sbjct: 73 EARVRELNEAFRAAIAKYGYQGAYQGVYPVKVNQRRVVVETIARAGRPYAFGLEAGSKAE 132 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-------IIFNTVSQLNKFKDKAQKLH 115 + L + E E L+ I ++L + A +L Sbjct: 133 LALILAQELAEDALVTCNGFKDEDFVRLALMGKKLGKRVVITLEKFAELARVLRVAHELG 192 Query: 116 KKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 + L + + + ++ G + + + ++ L H Sbjct: 193 VRPLLGLRFKLRAKGSGQWASSGGEGAKFGLSAPEVLRAVEVLREVGMLDSLVMLHAHIG 252 Query: 167 CENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------------- 207 + + I +++LGGG+ Sbjct: 253 SQITDIRRIKAAVREAAQTYVQLRRLGAPIRYLNLGGGLAVDYDGSKSAFYASANYTTWE 312 Query: 208 -DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE 266 + + + + + + E G A+ + L V+D+ + Sbjct: 313 YAEDLVYVTKEVADQHREVHPILVTESGRALTAYHSVLVLQVIDVIRPPGEAAVEVPEDA 372 Query: 267 AHV 269 + Sbjct: 373 HQL 375 >gi|146281364|ref|YP_001171517.1| arginine decarboxylase [Pseudomonas stutzeri A1501] gi|145569569|gb|ABP78675.1| biosynthetic arginine decarboxylase [Pseudomonas stutzeri A1501] Length = 637 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 89/314 (28%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + L +K + + + Sbjct: 70 PLLVRFPGILQDRVRRLTGAFDANIERMEYAGKYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKF 107 G + S E+M YKD E L + I+ S++ Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHKVFIVIEKESEVGLV 189 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A +L + + +S + G + + + Sbjct: 190 IEEANELKLTPQVGLRVRLSSLASSKWADTGGERSKFGLSAAQLLSVIERFRAAEMDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + + + + +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYRQGFREAIRYYAELRALNLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 +Y + ++ + +++ I+ E G A+ + L V D+ + + Sbjct: 310 SINYDIDEYAGTVVGMLKEFCEAQGLPHPNIFSESGRAMTAHHAVLVMQVTDVERHNDEV 369 Query: 259 VIVDSSVEAHVPDY 272 +D+ E +PD Sbjct: 370 PQIDNYAE--LPDV 381 >gi|46371995|gb|AAP36992.2| arginine decarboxylase [Cucumis sativus] Length = 717 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 34/278 (12%), Positives = 78/278 (28%), Gaps = 35/278 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ + + + +KC + + + ++ Sbjct: 121 PLIVRFPDVLKNRLESLQSAFDYAIQSQGYGSHYQGVYPVKCNQDRFVVEDIVKFGSSFR 180 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E++L + +KD E ++ + NTV + + ++ Sbjct: 181 FGLEAGSKPELLLAMSCLCKGNSDAFLVCNGFKDAEYISLALIARKLALNTVIVIEQEEE 240 Query: 110 KAQKLHKKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIE--------SE 154 + L + P V + + G + Sbjct: 241 IDLVIDLSKRLFVRPVVGMRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLEQADM 300 Query: 155 IKNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 + + L FH + S I E + I +GGG+ Sbjct: 301 LDCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGANMRVIDIGGGLGIDYDGSKS 360 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL 249 D + E+Y+ + V + ++ ++ Sbjct: 361 SDSELSVAYGLEEYAAAVVDAVR--CVCDCRSVKHPII 396 >gi|21115130|gb|AAM43099.1| biosynthetic arginine decarboxylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575582|gb|AAY50992.1| biosynthetic arginine decarboxylase [Xanthomonas campestris pv. campestris str. 8004] Length = 675 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 99/332 (29%), Gaps = 46/332 (13%) Query: 29 GVKLLLALKCFAAWGMFDTLNQY---MDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCE 85 G + +K G+ TL + G + S E+M YKD E Sbjct: 138 GYTAVYPIKVNQHRGVAGTLASHHGEGFGLEAGSKPELMAVLALSRPGGLIVCNGYKDRE 197 Query: 86 IDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139 + I+ S+LN ++A+ L K GL + ++ + Sbjct: 198 YIRLALIGRKLGLQTFIVIEKPSELNLVLEEARALDVKPGLGVRMRLASLGAGKWQNSGG 257 Query: 140 FS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---G 187 + G + ++ ++N L FH + + + ++ + F Sbjct: 258 DKAKFGLSPRQVLDLWKSLRDTEYADSLNLLHFHMGSQISNVRDIANGMREATRYFVELS 317 Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDFCQR--------------LKEFSEKY---SVQIY 230 +I + +GGG+ + + +C L E++ +I Sbjct: 318 RLGAKISHVDVGGGLGIDYEGTRSRSYCSINYGLHSYASNIVQPLASACEEHGLPPPRIV 377 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE----AHVPDYL-LYQESATIYPNT 285 E G A+ + L V ++ + + V E H+ + + Sbjct: 378 TECGRAMTAHHAVLIANVSEVEQAPEGRVPDAHDDEPAAIRHLREIHDELDVRPAVELFQ 437 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 G L+ G+ +I D Sbjct: 438 EAQHFHAEG---LSAYALGQIDLTHRARIDDL 466 >gi|327479540|gb|AEA82850.1| arginine decarboxylase [Pseudomonas stutzeri DSM 4166] Length = 637 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 85/307 (27%), Gaps = 46/307 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + L +K + + + Sbjct: 70 PLLVRFPGILQDRVRRLTGAFDANIERMEYAGKYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKF 107 G + S E+M YKD E L + I+ S++ Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHKVFIVIEKESEVGLV 189 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158 ++A +L + + +S + G + + + Sbjct: 190 IEEANELKLTPQVGLRVRLSSLASSKWADTGGERSKFGLSAAQLLSVIERFRAAEMDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 L FH + + + + + + +++I +GGG+ Sbjct: 250 RLLHFHMGSQIANLADYRQGFREAIRYYAELRALNLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 +Y + ++ + +++ I+ E G A+ + L V D+ + + Sbjct: 310 SINYDIDEYAGTVVGMLKEFCEAQGLPHPNIFSESGRAMTAHHAVLVMQVTDVERHNDEI 369 Query: 259 VIVDSSV 265 +D+ Sbjct: 370 PQIDNYD 376 >gi|73808446|gb|AAZ85223.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808448|gb|AAZ85224.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808450|gb|AAZ85225.1| arginine decarboxylase [Solanum pimpinellifolium] Length = 448 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGTGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|59668404|emb|CAI39242.1| arginine decarboxylase [Solanum lycopersicum] Length = 707 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 109 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGTGFR 168 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 169 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 228 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 229 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 287 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 288 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 344 >gi|289207388|ref|YP_003459454.1| arginine decarboxylase [Thioalkalivibrio sp. K90mix] gi|288943019|gb|ADC70718.1| arginine decarboxylase [Thioalkalivibrio sp. K90mix] Length = 634 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 92/327 (28%), Gaps = 55/327 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD--- 53 P + + L + A + +K + D + D Sbjct: 63 PVLVRFQDVLDGRVRRLARAFDAAARELEYEGAFTAIYPIKVNQQRSVVDQILAAGDQPD 122 Query: 54 --------GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVL------SNCDTIIFN 99 G + S E+M + YKD E + + I+ Sbjct: 123 AEGLTPRVGLEAGSKPELMAVLAQSRPGAAIICNGYKDREYVRLALIGRQLGHRVYIVIE 182 Query: 100 TVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES----- 153 S+L + +A+ + + L + ++ + G D + Sbjct: 183 KPSELEEVIRQAEAMQVEPLLGLRVRLASIGKGKWQNTGGEKAKFGLSAADVLGILGRLR 242 Query: 154 ---EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK 207 + + L FH + + + F + + +GGG+ + Sbjct: 243 GLGWLDRLQLLHFHMGSQIANIRDIQNGMGEAASYFAALTEAGAALRVVDVGGGLGIDYE 302 Query: 208 ----------DYPVKDFC-------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD 250 +Y V+++ +R+ E +++ E G A+ + L T V+D Sbjct: 303 GSRSRNECSINYSVEEYALNILRPLKRICEEQGLAMPEVFSESGRALTAHHAVLITNVID 362 Query: 251 ISENIKNLVIVDSSVEAHVPDYLLYQE 277 E V + +P+ + Sbjct: 363 -CEPAPGDGDVPPAENGELPEIAAMRA 388 >gi|118113174|ref|XP_001236802.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor, partial [Gallus gallus] Length = 111 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 22/56 (39%) Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 + G SC D E + +GD + F+++ + ++ FN P I Sbjct: 52 LWGPSCDELDQIVENCLLPELSVGDWLIFDNMGSGTLGEQSTFNDYQRPLIYYMMS 107 >gi|254429276|ref|ZP_05042983.1| arginine decarboxylase [Alcanivorax sp. DG881] gi|196195445|gb|EDX90404.1| arginine decarboxylase [Alcanivorax sp. DG881] Length = 626 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 31/235 (13%), Positives = 60/235 (25%), Gaps = 31/235 (13%) Query: 14 LLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL---NQYM--DGTTSSSL 60 L + + A + +K + + G + S Sbjct: 69 LRQRVKLLAGAFREAIESHQYQGDYTPVYPIKVNQQRRVVHEILRARDEGERVGLEAGSK 128 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E++ YKD E L I+ +S+L A +L Sbjct: 129 PELLAVLALSNPGDTIVCNGYKDAEYLRLALMGEKLGFRVHIVVEKMSELPALLALADEL 188 Query: 115 HKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHN 165 + + +S SK + S+ G + + V L FH Sbjct: 189 GVSPRIGLRVRLMSISKGNWQNTGGEKSKFGLSAPQLMAAIEHCRAAGRLDCVKLLHFHL 248 Query: 166 NCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 + + E +E + +GGG+ + + +C Sbjct: 249 GSQVANIQDIKAGMREAARYYTEMRALGAAVETVDVGGGLGVDYEGTHSRSYCSM 303 >gi|188993450|ref|YP_001905460.1| arginine decarboxylase [Xanthomonas campestris pv. campestris str. B100] gi|167735210|emb|CAP53422.1| Arginine decarboxylase [Xanthomonas campestris pv. campestris] Length = 675 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 99/332 (29%), Gaps = 46/332 (13%) Query: 29 GVKLLLALKCFAAWGMFDTLNQY---MDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCE 85 G + +K G+ TL + G + S E+M YKD E Sbjct: 138 GYTAVYPIKVNQHRGVAGTLASHHGEGFGLEAGSKPELMAVLALSRPGGLIVCNGYKDRE 197 Query: 86 IDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139 + I+ S+LN ++A+ L K GL + ++ + Sbjct: 198 YIRLALIGRKLGLQTFIVIEKPSELNLVLEEARALDVKPGLGVRMRLASLGAGKWQNSGG 257 Query: 140 FS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---G 187 + G + ++ ++N L FH + + + ++ + F Sbjct: 258 DKAKFGLSPRQVLDLWKSLRDTEYADSLNLLHFHMGSQISNVRDIANGMREATRYFVELS 317 Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDFCQR--------------LKEFSEKY---SVQIY 230 +I + +GGG+ + + +C L E++ +I Sbjct: 318 RLGAKISHVDVGGGLGIDYEGTRSRSYCSINYGLHSYASNIVQPLASACEEHGLPPPRIV 377 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE----AHVPDYL-LYQESATIYPNT 285 E G A+ + L V ++ + + V E H+ + + Sbjct: 378 TECGRAMTAHHAVLIANVSEVEQAPEGRVPDAHDDEPAAIRHLREIHDELDVRPAVELFQ 437 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 G L+ G+ +I D Sbjct: 438 EAQHFHAEG---LSAYALGQIDLTHRARIDDL 466 >gi|312282713|dbj|BAJ34222.1| unnamed protein product [Thellungiella halophila] Length = 725 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 70/237 (29%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L+ ++ + + +KC + + + ++ Sbjct: 115 PLIVRFPDVLKNRLECLQSAFDFAIQSQGYDSHYQGVYPVKCNQDRFVVEDIVRFGSPFR 174 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L + +KD E ++ I+ + Sbjct: 175 FGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFKDAEYISLALLGRKLALNTLIVLEQEEE 234 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D +QK++ + GLR +S + + G + Sbjct: 235 LDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTSQIVRVMRKLSQSG 293 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + S A + E I+ I +GGG+ Sbjct: 294 MLDCLQLLHFHIGSQIPSTPLLTDGVAEAAQLYCELVRLGANIKVIDIGGGLGIDYD 350 >gi|297798446|ref|XP_002867107.1| hypothetical protein ARALYDRAFT_491183 [Arabidopsis lyrata subsp. lyrata] gi|297312943|gb|EFH43366.1| hypothetical protein ARALYDRAFT_491183 [Arabidopsis lyrata subsp. lyrata] Length = 707 Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 70/237 (29%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L+ ++ + + +KC + + + ++ Sbjct: 104 PLIVRFPDVLKNRLECLQSAFDFAIKSQGYDSHYQGVYPVKCNQDRFVVEDIVKFGSSFR 163 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L + +KD E ++ I+ + Sbjct: 164 FGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFKDAEYISLALLGRKLALNTVIVLEQEEE 223 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D +QK++ + GLR +S + + G + Sbjct: 224 LDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVLRKLSQSG 282 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + S A + E ++ I +GGG+ Sbjct: 283 MLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYD 339 >gi|61967704|gb|AAX56874.1| putative arginine decarboxylase [Solanum habrochaites] gi|61967706|gb|AAX56875.1| putative arginine decarboxylase [Solanum habrochaites] gi|61967710|gb|AAX56877.1| putative arginine decarboxylase [Solanum habrochaites] gi|61967714|gb|AAX56879.1| putative arginine decarboxylase [Solanum habrochaites] gi|61967718|gb|AAX56881.1| putative arginine decarboxylase [Solanum habrochaites] gi|317455848|gb|ADV29016.1| arginine decarboxylase [Solanum habrochaites] gi|317455850|gb|ADV29017.1| arginine decarboxylase [Solanum habrochaites] gi|317455854|gb|ADV29019.1| arginine decarboxylase [Solanum habrochaites] gi|317455856|gb|ADV29020.1| arginine decarboxylase [Solanum habrochaites] gi|317455858|gb|ADV29021.1| arginine decarboxylase [Solanum habrochaites] gi|317455860|gb|ADV29022.1| arginine decarboxylase [Solanum habrochaites] gi|317455864|gb|ADV29024.1| arginine decarboxylase [Solanum habrochaites] gi|317455866|gb|ADV29025.1| arginine decarboxylase [Solanum habrochaites] gi|317455868|gb|ADV29026.1| arginine decarboxylase [Solanum habrochaites] gi|317455870|gb|ADV29027.1| arginine decarboxylase [Solanum habrochaites] gi|317455872|gb|ADV29028.1| arginine decarboxylase [Solanum habrochaites] gi|317455874|gb|ADV29029.1| arginine decarboxylase [Solanum habrochaites] gi|317455882|gb|ADV29033.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 71/237 (29%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + + +I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMNFIDIGGGLGIDYD 301 >gi|61967708|gb|AAX56876.1| putative arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 71/237 (29%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + + +I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMNFIDIGGGLGIDYD 301 >gi|83649041|ref|YP_437476.1| arginine decarboxylase [Hahella chejuensis KCTC 2396] gi|83637084|gb|ABC33051.1| arginine decarboxylase [Hahella chejuensis KCTC 2396] Length = 636 Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 79/297 (26%), Gaps = 50/297 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTL-------N 49 P + L + ++ A +L + +K + + + Sbjct: 61 PVLVRFADILHHRVNHLCEAFNRAAEQLAYSGRYTAVYPVKVNQQRRVIEEIVAAQPAAA 120 Query: 50 QYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E++ YKD E + + + + K + Sbjct: 121 NGQIGLEAGSKPELIAVLAMSNPGATIVCNGYKDREFIRLALLGQQMGYKVYIVVEKLNE 180 Query: 110 KAQKLHKKIGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKIESEI------- 155 L + + + P + K + S+ G ++ Sbjct: 181 LTYVLEESRSMGVTPRIGVRARLASIGKGNWQNTGGEKSKFGLSSVQILQVLDTLKQANA 240 Query: 156 -KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---- 207 +++ L FH + + E ++ + +GGG+ + Sbjct: 241 LESLQLLHFHLGSQIANIRDIQTGLRECARFYGELRRQGADVKIVDVGGGLGIDYEGTRS 300 Query: 208 ----------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251 + +KE ++ + E G AI + L T V+D Sbjct: 301 RSACSVNYSVHEYAFHVLRTIKEECDREGIPHPNVITESGRAITAHHAVLITDVIDR 357 >gi|77747964|ref|NP_639208.2| arginine decarboxylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761320|ref|YP_245012.2| arginine decarboxylase [Xanthomonas campestris pv. campestris str. 8004] gi|48474871|sp|Q8P448|SPEA_XANCP RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC Length = 628 Score = 59.8 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 99/332 (29%), Gaps = 46/332 (13%) Query: 29 GVKLLLALKCFAAWGMFDTLNQY---MDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCE 85 G + +K G+ TL + G + S E+M YKD E Sbjct: 91 GYTAVYPIKVNQHRGVAGTLASHHGEGFGLEAGSKPELMAVLALSRPGGLIVCNGYKDRE 150 Query: 86 IDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139 + I+ S+LN ++A+ L K GL + ++ + Sbjct: 151 YIRLALIGRKLGLQTFIVIEKPSELNLVLEEARALDVKPGLGVRMRLASLGAGKWQNSGG 210 Query: 140 FS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---G 187 + G + ++ ++N L FH + + + ++ + F Sbjct: 211 DKAKFGLSPRQVLDLWKSLRDTEYADSLNLLHFHMGSQISNVRDIANGMREATRYFVELS 270 Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDFCQR--------------LKEFSEKY---SVQIY 230 +I + +GGG+ + + +C L E++ +I Sbjct: 271 RLGAKISHVDVGGGLGIDYEGTRSRSYCSINYGLHSYASNIVQPLASACEEHGLPPPRIV 330 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE----AHVPDYL-LYQESATIYPNT 285 E G A+ + L V ++ + + V E H+ + + Sbjct: 331 TECGRAMTAHHAVLIANVSEVEQAPEGRVPDAHDDEPAAIRHLREIHDELDVRPAVELFQ 390 Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 G L+ G+ +I D Sbjct: 391 EAQHFHAEG---LSAYALGQIDLTHRARIDDL 419 >gi|302538022|ref|ZP_07290364.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. C] gi|302446917|gb|EFL18733.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. C] Length = 487 Score = 59.8 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 22/247 (8%), Positives = 67/247 (27%), Gaps = 14/247 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59 + +P ++ ++ NL + + + ++ A K + + L G ++S Sbjct: 33 LGSPLNVLLPDQIALNLGAFRSVLRGHQLSGRVFFAHKANRSSALVRRLTTTEAGLDAAS 92 Query: 60 LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 L E+ F G+ + + + + +L + + Sbjct: 93 LAELQHALGSGFTGDKVMVTGPKDPEFLWLAARAGAIVNADGIGELVEAAGFVRSHGLPR 152 Query: 119 GLRI-----NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173 + + + + D +ES + + + + + Sbjct: 153 LRILLRLSEFETSGARTLSRTSRFGTSFKALGRLLDTLESFKEELEPIGVGYHLDTTGLD 212 Query: 174 CFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEKYSV 227 + L+ + +GGG + + + + K++ Sbjct: 213 EKATALEGCLIAVEELRLRGFGPRAVDVGGGFGISYLAHADQWERYTSALTQAVLGKHTP 272 Query: 228 QIYLEPG 234 + G Sbjct: 273 MTWGGHG 279 >gi|301792365|ref|XP_002931149.1| PREDICTED: LOW QUALITY PROTEIN: ornithine decarboxylase-like [Ailuropoda melanoleuca] Length = 497 Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 34/331 (10%), Positives = 70/331 (21%), Gaps = 32/331 (9%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + + D +L ++ + V K + TL G +S V L Sbjct: 85 FNVADLGDILKT--HLRWLEASPRVTPFY-XKGNDSRTTVKTLPALGTGLDCASKIGVQL 141 Query: 66 GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E Y + ++ + + +L + K+ LRI Sbjct: 142 VQSLGVPPERKIYANPRQQASQIKYAASNRIQMMTSGGELELMEVPGAHPKAKLVLRIAT 201 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 S + L+ D+ +V G+ F + Sbjct: 202 DDSKAVCGLSVKFGXTLHTSGLLLDRAGERGIDVIGVSFPVGSGCTNPETXCGATPAAPC 261 Query: 185 EFGH--------------------FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 FG ++++ + S Sbjct: 262 VFGMGAEVAFSLXLLDAGGGFPGSGDGKLKFEEIASVTDPRTSPSGQTQEXDSQPVASAF 321 Query: 225 YSVQIYLEPGEAIVTNTTTLNTT----VLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + A + ++ + AH + Sbjct: 322 TLTVNIVXLLRAQTRSDDEEEPREQTFPCYVNGGVDGCSHCILCDHAHXEPLQQKRPKP- 380 Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP 311 Y+ G +C + D E Sbjct: 381 ---GEKYYSTSAQGPTCASLDRVVERRDLPE 408 >gi|296164218|ref|ZP_06846812.1| orn/DAP/Arg decarboxylase 2 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900424|gb|EFG79836.1| orn/DAP/Arg decarboxylase 2 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 302 Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 6/125 (4%) Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMV 292 P + TVL +S ++ S E L QE++ GP V Sbjct: 171 PVQGFKRRGDYGIITVLGLSMSLSEQW---KSSEFLPDPTLWPQEASDELQPAGPVRCCV 227 Query: 293 CGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDG 349 G SCL D+ + + + GD + + + AGY +++ + F+G+ +P D Sbjct: 228 GGASCLDYDMLTWRKVKLPRQPRYGDLLIYPNTAGYQMDKNESEFHGLPLPPKLEVTRDD 287 Query: 350 TIKAI 354 + Sbjct: 288 EGRLR 292 >gi|23397086|gb|AAN31828.1| putative arginine decarboxylase SPE2 [Arabidopsis thaliana] Length = 711 Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 69/237 (29%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L+ + + + +KC + + + ++ Sbjct: 107 PLIVRFPDVLKNRLECLQSAFDYAIKSQGYDSHYQGVYPVKCNQDRFVVEDIVKFGSSFR 166 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L + +KD E ++ I+ + Sbjct: 167 FGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFKDAEYISLALLGRKLALNTVIVLEQEEE 226 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ + +QK++ + GLR +S + + G + Sbjct: 227 LDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVRKLRQSG 285 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + S A + E ++ I +GGG+ Sbjct: 286 MLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYD 342 >gi|15236176|ref|NP_195197.1| ADC2 (ARGININE DECARBOXYLASE 2); arginine decarboxylase [Arabidopsis thaliana] gi|42573175|ref|NP_974684.1| ADC2 (ARGININE DECARBOXYLASE 2); arginine decarboxylase [Arabidopsis thaliana] gi|12229960|sp|O23141|SPE2_ARATH RecName: Full=Arginine decarboxylase 2; Short=ADC 2; Short=ARGDC 2; AltName: Full=ADC-N gi|2271485|gb|AAB72179.1| arginine decarboxylase [Arabidopsis thaliana] gi|3096940|emb|CAA18850.1| arginine decarboxylase SPE2 [Arabidopsis thaliana] gi|7270422|emb|CAB80188.1| arginine decarboxylase SPE2 [Arabidopsis thaliana] gi|14517492|gb|AAK62636.1| AT4g34710/T4L20_290 [Arabidopsis thaliana] gi|20334764|gb|AAM16243.1| AT4g34710/T4L20_290 [Arabidopsis thaliana] gi|332661013|gb|AEE86413.1| arginine decarboxylase 2 [Arabidopsis thaliana] gi|332661014|gb|AEE86414.1| arginine decarboxylase 2 [Arabidopsis thaliana] Length = 711 Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 69/237 (29%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L+ + + + +KC + + + ++ Sbjct: 107 PLIVRFPDVLKNRLECLQSAFDYAIKSQGYDSHYQGVYPVKCNQDRFVVEDIVKFGSSFR 166 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L + +KD E ++ I+ + Sbjct: 167 FGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFKDAEYISLALLGRKLALNTVIVLEQEEE 226 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ + +QK++ + GLR +S + + G + Sbjct: 227 LDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVRKLRQSG 285 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + S A + E ++ I +GGG+ Sbjct: 286 MLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYD 342 >gi|268591781|ref|ZP_06126002.1| arginine 2-monooxygenase [Providencia rettgeri DSM 1131] gi|291312743|gb|EFE53196.1| arginine 2-monooxygenase [Providencia rettgeri DSM 1131] Length = 634 Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 77/250 (30%), Gaps = 26/250 (10%) Query: 13 KLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM--DGTTSSSLYEVMLG 66 +L + R++ G K L+ +K + ++L G + S E+M Sbjct: 75 RLRSINAAFRRARESYGYKGDYFLVYPIKVNQQRRVIESLVNSGEPLGLEAGSKAELMAV 134 Query: 67 HEKFGG-ETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 G +T YKD E L + ++ +S++ +A+ L+ Sbjct: 135 LANAGKTQTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIEMVLAEAESLNVTPR 194 Query: 120 LRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNNCE-- 168 L + ++ + + G ++ ++ L FH + Sbjct: 195 LGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLVEILRNANRLDSLQLLHFHLGSQMA 254 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + E I+ +GGG+ + + C + +Y+ Sbjct: 255 NIRDIATGVRESARFYVELHRLGVNIQCFDVGGGLGVDYEGTRSQSDCS-VNYGLNEYAN 313 Query: 228 QIYLEPGEAI 237 + G+A Sbjct: 314 NVIWAIGDAC 323 >gi|325281202|ref|YP_004253744.1| Biosynthetic arginine decarboxylase [Odoribacter splanchnicus DSM 20712] gi|324313011|gb|ADY33564.1| Biosynthetic arginine decarboxylase [Odoribacter splanchnicus DSM 20712] Length = 629 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 30/264 (11%), Positives = 74/264 (28%), Gaps = 32/264 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM---- 52 P L L N ++ + A + ++ +K + + + + Sbjct: 59 PVLLRFPDILDNRIEKISNCFQAAAREYGYSAKNFIIYPIKVNQMRPVVEEIVSHGNKFN 118 Query: 53 DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+ E YKD + ++ + +L Sbjct: 119 IGLEAGSKPELHAVLSIDIDDEAMIICNGYKDESYIELALLAQKMGKRIFLVVEKLMELK 178 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEI--------K 156 A+K++ K + I ++ S + + S+ G + +++ Sbjct: 179 TIARLAKKMNVKPNIGIRIKLASSGSGKWEESGGDVSKFGVNSSELLDALDILEKNKMAD 238 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 ++ + FH + + E I ++ +GGG+ Sbjct: 239 SLQLIHFHIGSQVTNIRRIKTALKEASQFYVELKRMGYNINFVDIGGGLGVDYDG-TRSA 297 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAI 237 + ++Y +A Sbjct: 298 TSNSMNYSIQEYVNDAVSSIVDAC 321 >gi|90021245|ref|YP_527072.1| arginine decarboxylase [Saccharophagus degradans 2-40] gi|89950845|gb|ABD80860.1| arginine decarboxylase [Saccharophagus degradans 2-40] Length = 639 Score = 59.4 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 86/312 (27%), Gaps = 48/312 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQ----YM 52 P + + L + A + + +K + + + + Y Sbjct: 66 PVLIRFEDLLEEQIGRLNNAFTTAIKASNYQGQYRGVFPIKVNQQCHVIEEIAEVGAKYG 125 Query: 53 DGTTSSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------ 105 G + S E+++ + YKD E + + + + Sbjct: 126 HGLEAGSKPELIIALAHLESQDACIVCNGYKDAEFIDLGLQACKMGYKCFFVIETPSELP 185 Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------K 156 ++++KL K + + S + S G IE Sbjct: 186 IIIERSRKLGIKPMIGVRVKLASMVGGHWNATSGDRSIFGLSIAQLIEMVDTLKAEGMLD 245 Query: 157 NVNGLMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + L +H + + + ++ E + ++ LGGG+ Sbjct: 246 CLKLLHYHLGSQIPNIRDIRSGVLEACHVYNELVKEGAAMGYLDLGGGLAVDYDGSKSNY 305 Query: 208 --------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 D D + + I E G A + ++ L VLD+++ Sbjct: 306 IHSKNYTLDEYCTDIVDVIISTLDPQGVEHPTIITESGRATIAYSSVLVFNVLDVAKFEP 365 Query: 257 NLVIVDSSVEAH 268 + + + H Sbjct: 366 ASPVDEVQEDEH 377 >gi|118581018|ref|YP_902268.1| arginine decarboxylase [Pelobacter propionicus DSM 2379] gi|166979640|sp|A1AS90|SPEA_PELPD RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|118503728|gb|ABL00211.1| arginine decarboxylase [Pelobacter propionicus DSM 2379] Length = 635 Score = 59.4 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 81/297 (27%), Gaps = 48/297 (16%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + + + +NA + +K + + + + G S Sbjct: 67 NILEGRIASINRVFRNAIQTNNYPAQYQTFYPIKVNQQRQVVEAIANFGKKYNIGLEVGS 126 Query: 60 LYEVMLGHEKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK------DKAQ 112 E++ + YKD E + I +N + K + ++ Sbjct: 127 KPELVAAISISTNNSLPIICNGYKDTEFIETVLYATKIGYNITIVIEKLFELEKVIELSR 186 Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIES--------EIKNVNGLMF 163 K L I +S ++ G + + I + I +V L Sbjct: 187 KTGITPKLGIRVKLSSKGTGKWATSGGEDAKFGLRISEIITAIDLLKQYNLIDSVKLLHS 246 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207 H + I E +E+I +GGG+ Sbjct: 247 HIGSQVTKIDKIKNALIEGARIYVEMKKLGVNLEYIDIGGGLGVDYDGSKSSYFSSVNYS 306 Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260 V + + + + I E G A V + + + T +L+ + + Sbjct: 307 VEEYANDVIYQIKNICDEAGVDCPNIISESGRATVAHYSVMVTNILNTNTQNQMPDF 363 >gi|6715490|gb|AAF26434.1| arginine decarboxylase [Brassica juncea] Length = 692 Score = 59.4 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 69/237 (29%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L+ + + + +KC + + + ++ G Sbjct: 96 PVIVRFPDVLKNRLECLQSAFDLAVQSQGYGSHYQGVYPVKCNQDRFIVEDIVKFGSGFR 155 Query: 56 ---TSSSLYEVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L E +KD E ++ I+ + Sbjct: 156 FGLEAGSKPEILLAMSCLSKGNREAFLVCNGFKDVEYISLALLGRKLALNTVIVLEQEEE 215 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----- 156 L+ D ++K++ + GLR +S + + G + + Sbjct: 216 LDLVIDLSRKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTGQIVRVVRRLRESC 274 Query: 157 ---NVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + S + E ++ I +GGG+ Sbjct: 275 MLDCLQLLHFHIGSQIPSTALLSDGVGEAAQLYCELVRLGADMKVIDVGGGLGIDYD 331 >gi|86604858|ref|YP_473621.1| arginine decarboxylase [Synechococcus sp. JA-3-3Ab] gi|86553400|gb|ABC98358.1| arginine decarboxylase [Synechococcus sp. JA-3-3Ab] Length = 641 Score = 59.4 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 22/223 (9%), Positives = 59/223 (26%), Gaps = 27/223 (12%) Query: 12 QKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 ++ ++ + G + + +K + + + ++ G + S E+ Sbjct: 78 DRMRRICESFQQAIERFGYPNVYRGVYPVKVNQQRHLVEEVVKHGRAYHFGLEAGSKPEL 137 Query: 64 MLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLHK 116 ++ YKD + I+ + +L A+ L Sbjct: 138 LIALALLDTPGALLICNGYKDRDFMETALLAQRLGRTPIIVLERLQELELVLQAAEHLGI 197 Query: 117 KIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNNC 167 L + +S + + G + ++ + L +H Sbjct: 198 DPLLGVRAKLSAQGSGRWGTSAGDRGKFGLTATEMLQVVERLREVGKLHCLRLLHYHIGS 257 Query: 168 ENKSFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + I E + ++ +GGG+ Sbjct: 258 QISMVSVHGRAVREASQIYIELVKLGAPMGYLDVGGGLGVDYD 300 >gi|183599929|ref|ZP_02961422.1| hypothetical protein PROSTU_03449 [Providencia stuartii ATCC 25827] gi|188022203|gb|EDU60243.1| hypothetical protein PROSTU_03449 [Providencia stuartii ATCC 25827] Length = 634 Score = 59.4 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 76/262 (29%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + + A L+ +K + ++L G Sbjct: 63 PALFCFPQILQHRLRSINAAFRRARESYGYTGDYFLVYPIKVNQQRRVIESLVNSGEPLG 122 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L + N I L + ++ +S++ Sbjct: 123 LEAGSKAELMAVLANAGRTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIEVV 182 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 +A+ L+ L + ++ + + G ++ +++ Sbjct: 183 LKEAESLNVTPRLGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLVEILRQAGRLESL 242 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E +I+ +GGG+ + + C Sbjct: 243 QLLHFHLGSQMANIRDIATGVRESARFYVELHRLGVKIQCFDVGGGLGVDYEGTRSQSDC 302 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ + G+A Sbjct: 303 S-VNYGLNEYANNVIWAIGDAC 323 >gi|114777251|ref|ZP_01452262.1| arginine decarboxylase [Mariprofundus ferrooxydans PV-1] gi|114552396|gb|EAU54879.1| arginine decarboxylase [Mariprofundus ferrooxydans PV-1] Length = 634 Score = 59.4 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 88/318 (27%), Gaps = 41/318 (12%) Query: 12 QKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLG 66 ++ A + G + +K + + + ++ G + S E+ Sbjct: 74 AQIHQRFAIAREEAEYEGRYFGVYPIKVNQQRQVVEEIVEFGTEYNWGLEAGSKPELHAT 133 Query: 67 HEKF-GGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E YKD E + I+ ++L+ + +++L + Sbjct: 134 LAMLEDVEGLIVCNGYKDREFIELAMIGCKMGKRVFIVVEKPNELDMIMEASRRLGVEPL 193 Query: 120 LRINPSVSYSKFILADPNRPF-SRLGEKCKDKI--------ESEIKNVNGLMFHNNCE-- 168 + + + + + + S+ G + + + + + L FH + Sbjct: 194 IGLRCRLVATSQGKWEDSGGDSSKFGLAATELMDVVRKLRENNMLSALRLLHFHIGSQVP 253 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-----------------DYP 210 + E IE++ +GGG+ Sbjct: 254 RIRHIKQAMQEAARFYVELRKLGAPIEFMDVGGGLGVNYDGSISGTQTSVDYSLQEYAND 313 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP 270 + + + I E G A+V + L VL I+ + + + A + Sbjct: 314 IVWTLKAVCNEEGLPHPHIISESGRALVAHHAVLVIDVLGITRRTSRVSVDEPDENAPLQ 373 Query: 271 DYLLYQESATIYPNTGPY 288 ++ A Sbjct: 374 LRQMWDTWADFDCIEPRE 391 >gi|223937508|ref|ZP_03629412.1| arginine decarboxylase [bacterium Ellin514] gi|223893859|gb|EEF60316.1| arginine decarboxylase [bacterium Ellin514] Length = 646 Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 87/312 (27%), Gaps = 48/312 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + + L N +++ +N+ + + +K + + + + Sbjct: 67 PVLIRFQDILRNRVESINTAFRNSITEFNYQGSYRGVFPIKVNQLREVVEEILEAGKPFN 126 Query: 53 DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLN 105 G S E+ L + G N I + ++ + +L Sbjct: 127 FGLEVGSKPELFAGLALQNQIGSLIICNGYKDAGFIKMAILGQKLGKKVIMVVEKLEELR 186 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIES--------EIK 156 + +++L + + I + + ++ G + + + + Sbjct: 187 QIITISKQLGVEPSVGIRARLHSKGAGKWAESGGENAKFGLSTSELLAATEMLKSEGLGQ 246 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 L FH + + + IE++ +GGG+ Sbjct: 247 CFKLLHFHIGSQVPDILTVKKAVQEASRFYAKLFKMGFNIEYMDVGGGLGVDYDGSRSAF 306 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + + + I E G AIV + + L V E I+ Sbjct: 307 DSSTNYTLQEYTNDIVYYVGDVCNAEKVPHPHIISESGRAIVAHHSMLVVEVFGAIEKIR 366 Query: 257 NLVIVDSSVEAH 268 + + + H Sbjct: 367 SGNGIHYTENEH 378 >gi|158145243|gb|ABW21853.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ A + + +KC + + + ++ Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSDFR 125 Query: 54 -GTTSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ + GLR +S + + G + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|115446149|ref|NP_001046854.1| Os02g0482400 [Oryza sativa Japonica Group] gi|47848622|dbj|BAD22471.1| putative ornithine decarboxylase [Oryza sativa Japonica Group] gi|113536385|dbj|BAF08768.1| Os02g0482400 [Oryza sativa Japonica Group] Length = 457 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 47/167 (28%), Gaps = 7/167 (4%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + +ID ++ + GV+ A+KC + L G +S E+ Sbjct: 63 FNVIDLGEVARLFAAWWRGLR--GVRPYYAVKCNPNPALLGALAGLGAGFDCASRAEMEA 120 Query: 66 GHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y + A D F++ ++ K K + ++ Sbjct: 121 VLALGVAADRVVYANPCKLEPHLEYAAGVGVDLTTFDSEEEVGKIKRCHPGCRLLLRIKA 180 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNC 167 +L + + E + V G+ FH Sbjct: 181 PDGDDGGGAMLNLGTKYGAHRDEVVPLLAAARRAGMAVVGVSFHVGS 227 >gi|304312431|ref|YP_003812029.1| Arginine decarboxylase [gamma proteobacterium HdN1] gi|301798164|emb|CBL46386.1| Arginine decarboxylase [gamma proteobacterium HdN1] Length = 633 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 87/304 (28%), Gaps = 46/304 (15%) Query: 12 QKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLN-------QYMDGTTSSSL 60 ++ + L+ +K + + + G + S Sbjct: 70 DRVRRLCKAFSESMADLDYNGSYTLVYPIKVNQQQSVVQEIVNTKVDIPRCSAGLEAGSK 129 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E+M + YKD E I+ +S+L ++A+++ Sbjct: 130 PELMAVLAMAREGSTIVCNGYKDREYIRLALIGEKTGRKVYIVVEKLSELQLILEEAEEM 189 Query: 115 HKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHN 165 + + S+ K + S+ G I+ + L FH Sbjct: 190 QVTPRIGLRTRLNSHGKGNWQNTGGEKSKFGLAATQIIKVLAVLRASGKLDCLQLLHFHL 249 Query: 166 NCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK--------------D 208 + + A +K + F ++ I +GGG+ + + Sbjct: 250 GSQISNIRDIQAGMKEAARYFSELRLAGAGVQCIDVGGGLGVDYEGTRSRSNCSMNYSME 309 Query: 209 YPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265 Q L+ +++ I+ E G A+ + L + V+ I S Sbjct: 310 EYAYAIVQALRNTCDEHDLDMPDIFTESGRAVTAHHAVLVSNVIGCESPFSGGAIAAPSP 369 Query: 266 EAHV 269 +A + Sbjct: 370 DASM 373 >gi|239996379|ref|ZP_04716903.1| arginine decarboxylase [Alteromonas macleodii ATCC 27126] Length = 636 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 30/313 (9%), Positives = 94/313 (30%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + + +++ + + +K + + + Sbjct: 61 PVVVRFHDILRSQVAGLNKAFRSSIEEAEYQGQYQGVYPVKVNQMREVVEEIVDAGKPFN 120 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E++ E+ YKD E+ + + + ++L Sbjct: 121 YGLEAGSKAELLTVLAMNTNEESLTILNGYKDDEVMRLALLGRKLGRRVVVVVEKYTELL 180 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156 A++L + + ++ + + + G + I + Sbjct: 181 LLVKIAKELDIDPIIGVRSKMTVKGRGKWESSGGERAKFGLTITEIINAARYLEEQGMAH 240 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + L FH + ++ I + +++++ +GGG+ Sbjct: 241 CLKLLHFHIGSQLTDIRAVKEAVTEGARIYADLHKMGFELDYVDVGGGLGIDYDGSNSTN 300 Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++++ + ++ + E G AI + + + T ++ ++ Sbjct: 301 ESSRNYSMQEYVADVVYGMKEMCDLEGVPHPHLVSESGRAITAHHSCVITEIVGEIKSNA 360 Query: 257 NLVIVDSSVEAHV 269 + + + H Sbjct: 361 SQMDTSAKAGEHF 373 >gi|73808442|gb|AAZ85221.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808444|gb|AAZ85222.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808454|gb|AAZ85227.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808456|gb|AAZ85228.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808458|gb|AAZ85229.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808460|gb|AAZ85230.1| arginine decarboxylase [Solanum pimpinellifolium] Length = 448 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ A + + +KC + + + ++ Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGLR 125 Query: 54 -GTTSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L K E +KD E ++ I+ + Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 + L FH + S + + + + +++I +GGG+ Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301 >gi|192358903|ref|YP_001981997.1| arginine decarboxylase [Cellvibrio japonicus Ueda107] gi|190685068|gb|ACE82746.1| arginine decarboxylase [Cellvibrio japonicus Ueda107] Length = 640 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 86/306 (28%), Gaps = 48/306 (15%) Query: 11 KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSS 58 + + + T A + +K + + ++ G + Sbjct: 74 ENLVDKRISTLNDSFALAIEASGYQGQYRGAFPIKVNQQSHVIAEIARFGERYNHGLEAG 133 Query: 59 SLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 S E+M+ E+ YKD E + + F + + + + Sbjct: 134 SKAELMIALATLKNRESLIICNGYKDPEFITLGLQARKLGFKCFFVVETLAELPHIIERS 193 Query: 118 IGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLM 162 L I P + + ++ + S G + I + + L Sbjct: 194 QALGIEPLIGVRLKLSTKVEGHWSEDSGDRSLFGLNTNELITVVDELRKANLLHCFQLLH 253 Query: 163 FHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207 FH + + A E + +I LGGG+ Sbjct: 254 FHLGSQIPNIRSIRAGVLEACRYYIELVAEGAPLGYIDLGGGLAIDYDGTSSTSGHSRNY 313 Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 D + ++E +++ I E G A V +T L +LD++ + + Sbjct: 314 SVQEYCIDVVEAIQECLDEHQIVHPTIVTESGRATVAHTAVLLFNILDVTHFEPTEPLGE 373 Query: 263 SSVEAH 268 + H Sbjct: 374 LPQDCH 379 >gi|170047366|ref|XP_001851194.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167869851|gb|EDS33234.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 430 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 90/333 (27%), Gaps = 40/333 (12%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE--KFGGETHA 76 ++R V+ + + T G SS EV+ E G Sbjct: 50 RHYDWLRNLPRVRPYYTVGSNDDVRIIGTTALLDCGYVCSSKAEVLKVLEFRVDPGVVLL 109 Query: 77 YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136 V + ++F++ +L + I R++ Sbjct: 110 ERVGGNAELLRFARRKDVRVVFDSEEELRMIHQYFPEAEVLIRFRLSED----------- 158 Query: 137 NRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FI 190 +P + + +D + +V G F+ F + + H Sbjct: 159 VQPGCQADGEARDLLNLAKELNMDVIGWCFNAGSSCCDPAIFYTAISKGREITDHATIVG 218 Query: 191 TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD 250 ++I+LG G+ KD + + + E Y + A V + + Sbjct: 219 FNFKFINLGVGV-CGQKDVQGQRYASYINRALEDYFPERRGWTIAAEVGSFHSAAAVTAI 277 Query: 251 ISENIKNLVIVDSSVEAHVPDYLLY------QESATIYPNTGPYTAMV------CGRSC- 297 + K + + Y + S ++ + P +V CG C Sbjct: 278 TAIRGKRIFWNQRHPSR-IDQVFYYVSGRVERTSHSLIHASDPVCPIVWKDRDECGVECR 336 Query: 298 ------LAGDIFGEFHFEKPVKIGDRISFEDVA 324 + + + + D + FE Sbjct: 337 TTLYEAGSDECICKDLLLPELNENDFMVFESQG 369 >gi|226355284|ref|YP_002785024.1| arginine decarboxylase [Deinococcus deserti VCD115] gi|226317274|gb|ACO45270.1| putative arginine decarboxylase [Deinococcus deserti VCD115] Length = 640 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 33/286 (11%), Positives = 85/286 (29%), Gaps = 48/286 (16%) Query: 14 LLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLY 61 L + + A + + +K + +T+ G + S Sbjct: 72 LAGRVKHLNEVFGQAIAEYGYTRHYQGVFPIKVNQRRAVVETVASAGYDYAHGLEAGSKA 131 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E+ L + + +KD L I S+L++ +A+ L Sbjct: 132 ELALCLAQRMHPDALLCCNGFKDDGFIKLALWGRTLGKNVVITIEKFSELDRILKQAKAL 191 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNVNGLMFHN 165 + + + + + + + G + + I ++ L H Sbjct: 192 GVRPAIGVRFKLHARGSGQWEESGGDQAKFGLNAYELLRVVERLKEEGMIDSLVMLHTHI 251 Query: 166 NCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK----------DYPVK 212 + ++ + + +++++++GGG+ +Y VK Sbjct: 252 GSQITDIRRVKVAVREATQTYAGLIAAGAELKYLNVGGGLGVDYDGSKTTFYASMNYTVK 311 Query: 213 DFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251 ++ + ++ I E G A+ + L V+D+ Sbjct: 312 EYAADVVYTIQETCKARGVPEPIIISESGRALTAHHAVLILPVIDV 357 >gi|332663150|ref|YP_004445938.1| Orn/DAP/Arg decarboxylase 2 [Haliscomenobacter hydrossis DSM 1100] gi|332331964|gb|AEE49065.1| Orn/DAP/Arg decarboxylase 2 [Haliscomenobacter hydrossis DSM 1100] Length = 469 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 40/395 (10%), Positives = 106/395 (26%), Gaps = 51/395 (12%) Query: 12 QKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67 ++ + K+ + K + + + ++ +SS +++ L Sbjct: 58 AQIKKARNLFTRAMKSLNYNGKYQYCYCTKSNHFSYILEEVIKHDVQLETSSAFDIDLIR 117 Query: 68 E-----KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNT----VSQLNKFKDKAQKLHKKI 118 + +K + + F + + + Q + Sbjct: 118 KLYKKGLIDKNITVVCNGFKPDHYKQRIVDLIHDGFENVIPVCDNIQEIEYYEQHIQGVC 177 Query: 119 GLRINPSVSYSKFILADPNRPFSR----LGEKCKDKIESEIKNVNGLMFHNNCENK---S 171 + I + +R R L + + + L F + K Sbjct: 178 KIGIRVATEEEPNFEFYTSRLGIRNSDVLPFFNEKIKNNPKFKLTLLHFFVDTGIKDSLY 237 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRL-------KEF 221 + + + +++GGG+ + ++ K + + + Sbjct: 238 YWGELRKAVRLYAHLRRESEDLGILNIGGGMPIRNSLGFEFDYKYMIKEIVKTILQACQK 297 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVEAHVPDYLLYQES- 278 + ++ E G+ V + +VL + ++D+S+ +PD E Sbjct: 298 EQIPEPDLFTEFGKYTVGESGAALFSVLAQKQQNDAERWYMIDNSLMTTLPDVWGIGERF 357 Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEF-----HFEKPVKIGD----RISFEDVAGY 326 + G SC D + + + G+ + F Y Sbjct: 358 ILLPINKWYNEYQRVNIGGLSCDNSDYYNAEVNQAQVYLPTFENGEPEPLFLGFFHTGAY 417 Query: 327 NINRKNWFNGINM-----PTIAVKNVDGTIKAIRE 356 ++ + + GI P + D + Sbjct: 418 Q-DQISGYGGIKHCLIPSPKHVLIYKDPQGNIVDR 451 >gi|332533231|ref|ZP_08409098.1| biosynthetic arginine decarboxylase [Pseudoalteromonas haloplanktis ANT/505] gi|332037310|gb|EGI73765.1| biosynthetic arginine decarboxylase [Pseudoalteromonas haloplanktis ANT/505] Length = 626 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 83/308 (26%), Gaps = 46/308 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLN--QYMD 53 P + L N +DT A + +K + L + Sbjct: 60 PVLVRFTDILKNRVDTLTNAFTQARANREYNGKYTCVYPIKVNQQRSVVSKLLAHPSGLV 119 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 G + S E+M YKD E + + + + K + Sbjct: 120 GLEAGSKPELMAILGVAKEPITIVCNGYKDSEFLRLACIGQAMGHSVKIVVEKLSELTTL 179 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158 L + L I P+ S K + + G + + + Sbjct: 180 LEEIDNLGIEPAIGIRIRLNSVGKGKWQNTGGEKGKFGLTAGQVLSAVEVLKKHNKLHLM 239 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 + FH + + L+ + F + + +GGG+ + Sbjct: 240 QMVHFHIGSQIANIRDIHRALRECARHFAELTQLNVPLNTVDVGGGLGVDYEGSGSRSAC 299 Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 + ++ E +++ I E G A+ + L T V+D+ + +L Sbjct: 300 SMNYTVEEYARNVVNAFAEVCDQHNLTHPAIITESGRALTAHHAVLITDVIDVEKAPNHL 359 Query: 259 VIVDSSVE 266 Sbjct: 360 NPEPPLEN 367 >gi|170049411|ref|XP_001855912.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167871259|gb|EDS34642.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 69 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 21/46 (45%) Query: 309 EKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354 ++I D + FE++ Y I + FNG +P I T + + Sbjct: 1 MPELQIDDWVVFENMGAYTIPVASPFNGFPLPKIYCYISKDTWEML 46 >gi|325282835|ref|YP_004255376.1| Biosynthetic arginine decarboxylase [Deinococcus proteolyticus MRP] gi|324314644|gb|ADY25759.1| Biosynthetic arginine decarboxylase [Deinococcus proteolyticus MRP] Length = 706 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 78/280 (27%), Gaps = 43/280 (15%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH 67 + + + Y GV +K + + + Q G + S E+ L Sbjct: 95 EAFRSAIKEYDYAGGYQGV---FPIKVNQRRAVVEEVAQAGYEYAHGLEAGSKAELALCL 151 Query: 68 E-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------AQKLHKKIGL 120 K E +KD + T+ N V + KF + A+ L + Sbjct: 152 AQKMHPEALLSCNGFKDDGFIKLALWGRTLGKNVVITIEKFSELDRTLKQAKALGVRPAF 211 Query: 121 RINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171 + + + + + G + + + + L H + Sbjct: 212 GVRFKLHARGSGQWEESGGDQAKFGLNAYELLRVVERLKEEDMLDTLVMLHTHIGSQITD 271 Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK-----------------DYPV 211 ++ + + Q+++++LGGG+ V Sbjct: 272 IRRVKVAVREATQTYAGLIAAGAQLKYLNLGGGLAVDYDGSKTTFYASMNYTLAEYAADV 331 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 Q + I E G A+ + L V+D+ Sbjct: 332 VYTAQEVCRARGVPEPTIVTESGRALTAHHAVLVIPVVDV 371 Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 41/170 (24%), Gaps = 29/170 (17%) Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----- 281 L+ +V N + D+ + + I + S+ +PD I Sbjct: 442 FHAILKKVAKLVRNEKYVPDEFEDLQSILADQYICNFSLFQSLPDNWAIDALFPIVPLDR 501 Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK-------IGD---RISFEDVAGYNINRK 331 A + +C + +F + VK GD + Y Sbjct: 502 LDQKPTRQATLVDITCDSDGKIEKFIDLRDVKTTLPVHEPGDQPYYLGVFLAGAYQDVLG 561 Query: 332 NWFNGINMPTIA--------------VKNVDGTIKAIREFSYNDYYNNLS 367 N N + A + I Y + S Sbjct: 562 NAHNLFGKVSEAHVTVTGQGKYDIDLFVRGQKARRMIESMGYEEVMLRDS 611 >gi|25141367|ref|NP_740834.1| hypothetical protein F53F10.2 [Caenorhabditis elegans] gi|20198830|gb|AAM15576.1|U97191_3 Hypothetical protein F53F10.2b [Caenorhabditis elegans] Length = 263 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 7/163 (4%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63 P++++D + L+ + V+ A+ C A + L+ +D S+ E+ Sbjct: 56 PFFVMDVAAIERRLEALRVMLPR--VRPNYAVACNADPVLARVLSNNIDVNFEVSNTAEL 113 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 L + + F S+ +I L + Sbjct: 114 ELVSMNVEPSRAVFCSQLMTRKAIKNAVLAGCSTFVVESEKQVTDVMNASPEAEIILAVC 173 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166 S + P E+ D NV G+ Sbjct: 174 LPYSTGEV----PFGCSVDEIEEILDMAHLLGANVTGIYLELG 212 >gi|168701034|ref|ZP_02733311.1| arginine decarboxylase [Gemmata obscuriglobus UQM 2246] Length = 645 Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 83/301 (27%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTL----NQYM 52 P L L + + + + + +K + + + Y Sbjct: 70 PLLLRFTDILQHRIGEIAGAFERSRKEYGYAGEYHCVYPIKVNQQRHVVEEVLSFGKDYN 129 Query: 53 DGTTSSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111 G + S E++ G +T +KD E ++ I N + + KF + Sbjct: 130 FGLEAGSKPELLAVLALTNGVDTPIICNGFKDDEFIKMVVMSRKIGKNIIPVVEKFTELE 189 Query: 112 QKLHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEIK-------- 156 + L + + S S+ G + +E+ Sbjct: 190 LIVKYMEELGVRQPIGVRVKLASRGSGRWRGSAGYRSKFGLTLTEVLEAYEFLKSKGLGD 249 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + FH + + + I E +++I +GGG+ Sbjct: 250 CLQMTHFHMGSQVSDIRKVKDALSEAARIYVELCRLGAGLKYIDVGGGLGIDYDGSQTAF 309 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + + + I E G A+V + L VL S+ K Sbjct: 310 ESSMNYTLQEYANDVVYRIKSVCDEAGVPHPAIISESGRALVAYHSVLVFDVLGTSDFDK 369 Query: 257 N 257 Sbjct: 370 C 370 >gi|326491615|dbj|BAJ94285.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326527709|dbj|BAK08129.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 711 Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 73/260 (28%), Gaps = 34/260 (13%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59 L + ++T A + + +KC + + + ++ G + S Sbjct: 122 DVLRHRVETLNAAFDYAVRSTGYAGRYQGVYPVKCNQDRYVVEDIVEFGAPFGFGLEAGS 181 Query: 60 LYEVMLGH----EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK-----FKDK 110 E++L + + YKD E ++ T+ NTV L + + Sbjct: 182 KPELLLTMSCLVARGSPDALLICNGYKDLEYVSLALIARTMGLNTVIVLEQEEELDIVVE 241 Query: 111 AQKLHKKIGLRINPSVSYSKFILAD--PNRPFSRLGEKCKDKIES--------EIKNVNG 160 A + + + +K + + G + + + Sbjct: 242 ASRRLNIRPVVGMRAKLRTKHAGHFGATSGEKGKFGLNAAQILSVVAKLKALGMLDCLQL 301 Query: 161 LMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 L FH + + I E + I +GGG+ + Sbjct: 302 LHFHIGSQIPTTALLADGVGEAAQIYCELARLGAAMRVIDVGGGLGIDYDGTHSAETDMS 361 Query: 218 LKEFSEKYSVQIYLEPGEAI 237 + E+Y+ + G Sbjct: 362 VAYSLEEYAAAVVAAVGRVC 381 >gi|301167358|emb|CBW26940.1| putative arginine decarboxylase [Bacteriovorax marinus SJ] Length = 635 Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 28/311 (9%), Positives = 84/311 (27%), Gaps = 48/311 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L + + + + + +K + + + Sbjct: 62 PAVIRFHDILRSRVRLINKVFRETIEEYDYEGRYYGVYPIKVNQMREVVEEIIDAGLKYD 121 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVA--YKDCEIDAVLSNCD-----TIIFNTVSQLN 105 G + S E++ + + D + L + I+ S++ Sbjct: 122 YGLEAGSKPELLAVLAMNDSKKALTILNGYKDDDYMKLALLGREVGRKIIIVIEKFSEIK 181 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILAD-PNRPFSRLGEKCKDKIES--------EIK 156 K ++++ + + + +S + ++ G + +++ Sbjct: 182 KIIRLSKEVGVEPLIGLRGKMSVPGCGRWSGSSGERAKFGLSVSEMLQAVELFRANGLGD 241 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY---- 209 + FH + F + + + +E+ +GGG+ Sbjct: 242 CIKLFHFHIGSQIPEIRSFKEAISEGGRIYAKLVQAGVPLEYFDIGGGLGVDYDGTRTIN 301 Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V +++ + I E G A+ + + + T V+ + Sbjct: 302 DSSTNYSLSEYVADVIYSLKQICDLEGVTHPNIVTESGRAVTAHHSCVVTNVIGKIDATS 361 Query: 257 NLVIVDSSVEA 267 + + E Sbjct: 362 DFNTKKVTGEH 372 >gi|332289354|ref|YP_004420206.1| arginine decarboxylase [Gallibacterium anatis UMN179] gi|330432250|gb|AEC17309.1| arginine decarboxylase [Gallibacterium anatis UMN179] Length = 643 Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 70/266 (26%), Gaps = 34/266 (12%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM- 52 + T + Q + + L + A L+ +K + ++L Sbjct: 71 LPT-LFCF-PQIIQHRLRSINAAFAQARADFGYEGNYFLVYPIKVNQYRRIIESLITSGQ 128 Query: 53 -DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E+M L H N YKD E + + + K + Sbjct: 129 PLGLEAGSKAELMAVLAHAGQTKTVIVCN-GYKDREYIRFALMGEKLGHKVYLVIEKISE 187 Query: 110 KAQKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI------- 155 L + L + P S S+ G ++ Sbjct: 188 IFLVLEEAKKLNVRPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLDLVNLLKDQQS 247 Query: 156 -KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 + L FH + + E I+ +GGG+ Sbjct: 248 LDCLQLLHFHLGSQLGNIRDVATGVRESARFYIELHRLGVNIQCFDVGGGLGVDYDGNRT 307 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAI 237 + C + +Y+ + G+A Sbjct: 308 ESDCS-VNYGLREYAETVVWGIGQAC 332 >gi|309792220|ref|ZP_07686692.1| Orn/DAP/Arg decarboxylase 2 [Oscillochloris trichoides DG6] gi|308225761|gb|EFO79517.1| Orn/DAP/Arg decarboxylase 2 [Oscillochloris trichoides DG6] Length = 508 Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 95/354 (26%), Gaps = 39/354 (11%) Query: 12 QKLLNNLDTALYIRKNAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG---- 66 +++ + A I + G L A K A T +S+ +VM+ Sbjct: 68 ERMRTWAEEARQISEYTGTFLYAYATKANFAAEAVATALAAGVHYETSAAADVMIAQRLW 127 Query: 67 HEK-FGGETHAYNVAYKDCEIDAVLS-----NCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 + + K+ A + C+TI + G+ Sbjct: 128 RQGTLPKGRLIFCHGSKEPNYLAAIRELRSDGCETITPVLDDLNELEDLITCPHTMQFGV 187 Query: 121 R-INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 R + D + + I + + + + F L Sbjct: 188 RERAAGNRDGRHPGQDRFGLSGAEITRAAEMIAASRHRLVLYHAMIGSQVEDEAHFLNTL 247 Query: 180 KNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFSEKYSVQ 228 ++ + + + + GGG+ + + + +++ +Y V Sbjct: 248 RDSVVGYCRLRQQVPTLRYFNFGGGVPTSGYRLGFEFDYVGFLTRLMRVIRDTCTEYDVP 307 Query: 229 I---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV---PDYLLYQESATIY 282 + E G V + V + + + PD +L + + Sbjct: 308 MPDLVGEFGRYTVATHSVFLLEVGAVKSGQPGEPDWYLVNGSLMVSLPDSILVEGQEFVI 367 Query: 283 -----PNTGPYTAMVCGR-SCLAGDIFGEF----HFEKPVKIGDRISFEDVAGY 326 + + GR +C + D++ + G ++ V Y Sbjct: 368 VPLNGWDRPVRPVRLAGRRTCDSDDVYPRPDQPPLMLPDIGEGLVLAICGVGAY 421 >gi|187736146|ref|YP_001878258.1| arginine decarboxylase [Akkermansia muciniphila ATCC BAA-835] gi|187426198|gb|ACD05477.1| arginine decarboxylase [Akkermansia muciniphila ATCC BAA-835] Length = 645 Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 84/289 (29%), Gaps = 48/289 (16%) Query: 11 KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58 + L + + + A + + +K + + + ++ G + Sbjct: 79 RDLLRSRIAELNDSFRKAIKEAGYQGKYQGVYPIKVNQQRQVVEEIAEFGTKYDYGLEAG 138 Query: 59 SLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKA 111 S E++ + YKD E + I+ S+L+ ++A Sbjct: 139 SKPELIAAMAHMHNPNAYLICNGYKDDEFIDLALTAQKMGLNIFIVLEMPSELDVILERA 198 Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSR-LGEKCKDKIE--------SEIKNVNGLM 162 +++ + L + ++ L + G ++ + + L Sbjct: 199 RRMDIRPNLGVRVKLAAKGSGLWQESAGDKSVFGLNAAQVVDVVDKLKQVDALDCLKLLH 258 Query: 163 FHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207 +H + + I + + + +GGG+ Sbjct: 259 YHQGSQIPNISVVREGLTEAVRIYVDLVKEGAPLGTLDMGGGLAVDYDGSKTNFHSSCNY 318 Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251 +D + + + KY + E G A+V + L VLD+ Sbjct: 319 SIAEFARDVVEVVGDMCSKYGVPHPTLVTESGRAVVAYYSVLVFNVLDV 367 >gi|77361749|ref|YP_341324.1| arginine decarboxylase [Pseudoalteromonas haloplanktis TAC125] gi|76876660|emb|CAI87882.1| arginine decarboxylase, PLP-binding, biosynthetic [Pseudoalteromonas haloplanktis TAC125] Length = 626 Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 87/311 (27%), Gaps = 46/311 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGV--------KLLLALKCFAAWGMF-DTLN--QYMD 53 P + L N +DT A + +K + L + Sbjct: 60 PVLVRFTDILQNRVDTLTNAFTQARANREYQGEYTCVYPIKVNQQRSVVSKLLAHPSGLV 119 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKF 107 G + S E+M YKD I + + I+ +S+L Sbjct: 120 GLEAGSKPELMAILGVAKEPITIVCNGYKDSEFLRLACIGQAMGHKVKIVVEKLSELTTL 179 Query: 108 KDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158 ++ L + + I S K + + G + + + Sbjct: 180 LEEIDNLGIEPAIGIRIRLNSVGKGKWQNTGGEKGKFGLTAGQVLSAVEVLKKHNKLHLM 239 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207 + FH + + L+ + F + + +GGG+ + Sbjct: 240 QMVHFHIGSQIANIRDIHRALRECARHFAELTQLGVPLNTVDVGGGLGVDYEGSGSRSAC 299 Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 ++ E +++ I E G A+ + L T V+D+ + +L Sbjct: 300 SMNYTVAEYARNVVNAFSEVCDQHQLTHPAIITESGRALTAHHAVLITDVIDVEKAPNHL 359 Query: 259 VIVDSSVEAHV 269 + + + Sbjct: 360 NPEAPAQNSTL 370 >gi|256830090|ref|YP_003158818.1| arginine decarboxylase [Desulfomicrobium baculatum DSM 4028] gi|256579266|gb|ACU90402.1| arginine decarboxylase [Desulfomicrobium baculatum DSM 4028] Length = 655 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 85/296 (28%), Gaps = 43/296 (14%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGH 67 + + Y + GV +K + + +++ D G S E++ Sbjct: 83 DSFASAIKALQYSGEFRGV---YPVKVNQQQQVLEEISKVGDRYNHGYEVGSKAELIAAL 139 Query: 68 EKFG-GETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGL 120 + YKD + + ++ S+L D+A+ L K + Sbjct: 140 SFLKNPKACLVCNGYKDRDYIDLALYACKMGFLCFLVLEMPSELPLILDRAKALGIKPRI 199 Query: 121 RINPSVSYSKFILADPNRPF-SRLGEKCKDKI--------ESEIKNVNGLMFHNNCE--- 168 + VS + S G + + +S + V L FH + Sbjct: 200 GVRIKVSTQAGGHWAESAGDLSIFGLSTAEVVDVLDLLRGQSMLDCVQLLHFHLGSQIPN 259 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------------DYPVKDF 214 + + E + ++ LGGG+ + D Sbjct: 260 IRDIRTAVHEATRMYAELAKEGCAMGFLDLGGGLAVDYDGSHTNYASSRNYSLEEYCTDI 319 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA 267 + + +++ I E G A V + L VLD+S V E Sbjct: 320 VESVMATVDEHDLPHPHIITESGRATVAYYSVLLFNVLDVSRLENRTVPQTLDEED 375 >gi|169245554|gb|ACA50823.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 39/153 (25%), Gaps = 21/153 (13%) Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +E I LGGG+ + D +K + +EPG + Sbjct: 3 GKPLETIDLGGGLGIPYFAGETPLDLAAVSAAIPDLKALVKAHPLITDAHVIVEPGRFLA 62 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288 + V + + +V H + + Sbjct: 63 GSGGVYVAEVNSVKTSRGTTFVVMDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADYEE 122 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 TA + G C D +K GD ++ Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|38037092|gb|AAR08423.1| arginine decarboxylase 2 [Pringlea antiscorbutica] Length = 711 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 82/278 (29%), Gaps = 36/278 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L+ ++ + + +KC + + + ++ Sbjct: 113 PLIVRFPDVLKNRLECLQSAFDCAIQSLGYDSHYQGVFPVKCNQDRFVVEDIVRFGSPFR 172 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L + +KD E ++ I+ + Sbjct: 173 FGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFKDAEYVSLALLGRKLALNTVIVLEQEEE 232 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D +QK++ + GLR +S + + G + Sbjct: 233 LDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVMGKLSQTG 291 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + L FH + S A + E ++ I +GGG+ Sbjct: 292 MLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYDGSK 351 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248 + + E+Y+ + + + + + + Sbjct: 352 CGESDLSVAYTLEEYA-EAVVASVRYVCDRRSVKHPVI 388 >gi|37222548|gb|AAO49839.1| ornithine decarboxylase [Vitis vinifera] Length = 276 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 35/275 (12%), Positives = 71/275 (25%), Gaps = 27/275 (9%) Query: 40 AAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTI 96 L +S E+ + + K A + Sbjct: 1 PDPTFLAALAALGSSFDCASRTEIETVLGLGVSSDRIIFANPCKAESHIKYAASVGVNLT 60 Query: 97 IFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIES 153 F++ ++ K + H K L I + L E+ + Sbjct: 61 TFDSRDEIEKIRKY----HPKCALLIRVKPPDDSGARCPLESKYGALPEEVTPLLQAAQD 116 Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDY 209 V+G+ FH + + F + ++ +++GGG Sbjct: 117 ARLTVSGVSFHIGSGATLAQAYRGAIAEARAVFDTASRLGLPRMHVLNIGGGFTXGPHFD 176 Query: 210 PVKDFCQ--RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-----D 262 + F ++ + I EPG + TL T ++ + Sbjct: 177 DATXAIKSSLQAYFPNEHGLTIIAEPGRYFAESAFTLVTNIIGKRVRSELREYWINDGIY 236 Query: 263 SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSC 297 S+ + D AT+ T+ +C Sbjct: 237 GSLNCILND------HATVTAKPLACTSNSVNPTC 265 >gi|7230371|gb|AAF42970.1|AF127239_1 arginine decarboxylase 1 [Nicotiana tabacum] gi|7230373|gb|AAF42971.1|AF127240_1 arginine decarboxylase 1 [Nicotiana tabacum] Length = 720 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 67/237 (28%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ A + + +KC + + + ++ Sbjct: 112 PLVVRFPDVLKNRLESLQSAFDLAVHSQGYGAHYQGVYPVKCNQDRFVVEDIVKFGSSFR 171 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQ 103 G + S E++L E +KD E L I+ + Sbjct: 172 FGLEAGSKPELLLAMSCLCRGSAEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 231 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K+ IGLR +S + + G + Sbjct: 232 LDLVIDISRKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVKKLEESG 290 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + S I E +++I GGG+ Sbjct: 291 MLDCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELIRLGAGMKFIDTGGGLGIDYD 347 >gi|298206695|ref|YP_003714874.1| putative arginine decarboxylase [Croceibacter atlanticus HTCC2559] gi|83849326|gb|EAP87194.1| putative arginine decarboxylase [Croceibacter atlanticus HTCC2559] Length = 486 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 48/394 (12%), Positives = 105/394 (26%), Gaps = 61/394 (15%) Query: 13 KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 K+ +N++ K K K + + +SS +++ Sbjct: 52 KISDNINRAKEWFRVAMKEHNYKGKYHYCYCTKSSHFQYVLHEALKNDIHIETSSAFDID 111 Query: 65 LG---HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--------AQK 113 + E+ + + + + + I + + + Sbjct: 112 IVESLKEQGKIKNDTFVICNGFKRDQYLENIARLINNGHENCIPVIDNYEELNLLGDVIT 171 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENKS 171 IG+RI + ++ N+ L F N + Sbjct: 172 KKYNIGIRIASEEEPKFEFYTSRLGIGYKNIVPFYNNQIKDNPQVNLKMLHFFINTGIRD 231 Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225 + L ++ +++GGG + +Y + + ++ Sbjct: 232 TAYYWNELVKCLKVYVSLKKICPTLDSLNIGGGFPIKNSLAFEYDYQYMISEIINQIKQV 291 Query: 226 S-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276 I+ E G V + VL + +++SS +PD Sbjct: 292 CDEADVPVPNIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNMINSSFITTMPDTWAIN 351 Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEKPVKIGDRISFE 321 + A N ++ G +C + D ++ +KP+ IG F Sbjct: 352 KRFVMLAVNRWNEEYERVLLGGLTCDSDDYYNSEQHMNAIYLPKYKKDKPLYIG----FF 407 Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350 + Y F G I P + + D Sbjct: 408 NTGAYQETIG-GFGGLHHCLIPQPKHLLIDKDEE 440 >gi|317051330|ref|YP_004112446.1| arginine decarboxylase [Desulfurispirillum indicum S5] gi|316946414|gb|ADU65890.1| arginine decarboxylase [Desulfurispirillum indicum S5] Length = 624 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 41/372 (11%), Positives = 97/372 (26%), Gaps = 62/372 (16%) Query: 2 IKTPY-----YLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYM 52 + TP+ +LI +++ + ++ K + +K + L Y Sbjct: 55 LSTPFIIRFPFLI-GEQIKKFYRAFQHAKEEFNYKGEHKAVFPIKVNQNRHFIERLLHYG 113 Query: 53 ----DGTTSSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF 107 G + S E+ +KD E + + + + Sbjct: 114 KDFSYGLEAGSKAELFAVLISDIPENALITCNGFKDREFLDLAVIGKQLGKDICVIIESV 173 Query: 108 KDKAQKLHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKI--------E 152 ++ + P + S + ++ G + + Sbjct: 174 EELVGLIDIYRRAETIPDIGFRIKLSSRGSGKWEKSSGEGAKFGLSSTEILLAIDLLKEH 233 Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTD--- 206 + VN L FH + + ++ F I+++++GGGI Sbjct: 234 DLLDRVNLLHFHIGSQITNVRTMKRAIREAGVIFAEVAKLGLNIKYLNIGGGIGVDYSGS 293 Query: 207 -------KDYPVKDFCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLDIS 252 +Y +++F + E + I E G I + T +++I Sbjct: 294 KSSSLASAEYSIEEFANDVVFTMEDMCNKHGLERPGIVTESGRVIAAYHAIVVTDLVEIM 353 Query: 253 ENIKNLVIVDSSVE------------AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300 +L + ++ + + M C Sbjct: 354 GAEYDLSHYQQTQNEVKPLLELKYALEYMNEKNYIEYYHDALEFKEDLRTMFTLGLCSLV 413 Query: 301 DIFGEFHFEKPV 312 D + + Sbjct: 414 DKSNGDILFQEI 425 >gi|110835259|ref|YP_694118.1| arginine decarboxylase [Alcanivorax borkumensis SK2] gi|110648370|emb|CAL17846.1| arginine decarboxylase, biosynthetic [Alcanivorax borkumensis SK2] Length = 626 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 48/285 (16%) Query: 14 LLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLNQYMDG----TTSSSL 60 L + + A + +K + + L DG + S Sbjct: 69 LRQRVKLLAGAFREAIEGHQYQGDYTPVYPIKVNQQRRVVHEILRARDDGERVGLEAGSK 128 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E++ YKD E L I+ S+L A +L Sbjct: 129 PELLAVLALSNPGDTIVCNGYKDAEYLRLALMGEKLGFHVQIVVEKTSELPALLALADEL 188 Query: 115 HKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHN 165 + + +S SK + S+ G + + V L FH Sbjct: 189 GVSPRIGLRVRLMSISKGNWQNTGGEKSKFGLSAPQLMAAIEHCRAAGRLDCVKLLHFHL 248 Query: 166 NCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----- 217 + + E +E + +GGG+ + + +C Sbjct: 249 GSQVANIQDIKAGMREAARYYTEMRALGAAVETVDVGGGLGVDYEGTHSRSYCSMNYGVA 308 Query: 218 ---------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLD 250 L++ ++ I E G A+ + L + D Sbjct: 309 DYARHIVQTLQQQCAEHGVPEPHIISESGRALTAHHAVLLVNITD 353 >gi|38037070|gb|AAR08422.1| arginine decarboxylase 1 [Pringlea antiscorbutica] Length = 735 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 71/237 (29%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ ++ + + +KC + + + ++ Sbjct: 128 PLIVRFPDVLKNRLESLQSAFDFAIQTQGYDSHYQGVYPVKCNQDRFIIEDIVEFGSSFR 187 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E++L + +KD E ++ + NTV L + ++ Sbjct: 188 FGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFKDAEYVSLALLGRKLELNTVIVLEQEEE 247 Query: 110 --------KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 K + IGLR +S + + G + Sbjct: 248 LELVIDLSKKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTIQIVRVVRKLRQVG 306 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + S + + E ++E I +GGG+ Sbjct: 307 MLDCLQLLHFHIGSQIPSTALLSDGVSEAAQLYCELIRLGARMEVIDIGGGLGIDYD 363 >gi|86142066|ref|ZP_01060590.1| arginine decarboxylase [Leeuwenhoekiella blandensis MED217] gi|85831629|gb|EAQ50085.1| arginine decarboxylase [Leeuwenhoekiella blandensis MED217] Length = 466 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 44/393 (11%), Positives = 106/393 (26%), Gaps = 61/393 (15%) Query: 13 KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 K+ N++ K K + D + +SS +++ Sbjct: 52 KISENINRAKGWFADAIAKHNYKGSYNYCYCTKSSHFKHVLDEALKNDIHIETSSAFDID 111 Query: 65 LGHEKFGGETHA---YNVAYKDCEIDAVLSNCDTIIFNTVSQ------LNKFKDKAQKLH 115 + ++ + + + + I + + + + Sbjct: 112 IVNKLKENGKITEDTFVICNGFKRDQYINNIAALINGGQKNCIPIIDNYEEINLLTEGIK 171 Query: 116 KKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171 + I + +R + + + ++ ++ L F N + Sbjct: 172 GDFKIGIRIASEEEPKFEFYTSRLGIGYKNIVPFYEEQIKNNDQVDLKMLHFFINTGIRD 231 Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQRLKEF 221 + L ++ +++GGG D Y V + ++K Sbjct: 232 NAYYWNELNKCLKVYIRLKKICPSLDSLNIGGGFPIKNSLAFDYDYAYMVDEIINQIKIT 291 Query: 222 SEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276 ++ I+ E G V + VL + +++SS +PD Sbjct: 292 CDEAEVPVPNIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNMINSSFITTLPDTWAIS 351 Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEKPVKIGDRISFE 321 + + ++ G +C + D + +KP+ IG F Sbjct: 352 KRFIMLPVNRWDEEYERVLLGGLTCDSDDYYNSEQHSNAIYLPRYKKDKPLYIG----FF 407 Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDG 349 + Y + G I P + + D Sbjct: 408 NTGAYQETIG-GYGGLQHCLIPQPKHILIDRDE 439 >gi|148656953|ref|YP_001277158.1| Orn/DAP/Arg decarboxylase 2 [Roseiflexus sp. RS-1] gi|148569063|gb|ABQ91208.1| Orn/DAP/Arg decarboxylase 2 [Roseiflexus sp. RS-1] Length = 522 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/333 (11%), Positives = 81/333 (24%), Gaps = 40/333 (12%) Query: 34 LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-----EKFGGETHAYNVAYKDCEIDA 88 A K A + T +S+ +V + H + + + KD A Sbjct: 88 YATKANFAEEVVRTAIGAGAHYETSAAADVTIAHRLWQQGVLPSDRYIFCNGSKDDAYLA 147 Query: 89 -----VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYS---KFILADPNRPF 140 + ++ A + + Sbjct: 148 AISALRRAGFARVVPVIDDLDELETLLAMCREPLLLGVRERHAPADVDADHPGGERFGLT 207 Query: 141 SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWIS 197 E+ +++ + + + ++ L + + + Sbjct: 208 PDEIEQVVERLRHTPHRLVMYHAMVGSQIEDADRWNMRLARSAEAYARLRQQAPSLMLFN 267 Query: 198 LGGGIHFT----DKDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNT 246 GGG+ + D + F +RL + E G V + Sbjct: 268 FGGGMPTSAYSLDFRFDYVGFLERLMRTLASTCAAHNVPQPTLVGEFGRYTVASHNVFIM 327 Query: 247 TVLDISENIKNLVIVDSSVEAHV---PDYLLYQESATIY-----PNTGPYTAMVCGR-SC 297 V + + + + PD L+ I + + GR +C Sbjct: 328 EVGRVKRGQGDAPDWVLINGSLMVSLPDSLIVPGQEFIILPLDGWDRPVRPVRLAGRLTC 387 Query: 298 LAGDIFGEFHFEKPVKI----GDRISFEDVAGY 326 + D F + G +I+F V Y Sbjct: 388 DSDDFFPRPGAPPLLLPDPYPGQKIAFFGVGAY 420 >gi|169245568|gb|ACA50830.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 38/153 (24%), Gaps = 21/153 (13%) Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +E I LGGG+ + D LK I +EPG + Sbjct: 3 GKPLETIDLGGGLGIPYFAGETPLDLEKVSAAIPDLKALLKAHPLVADAHIIVEPGRFLA 62 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288 V + + +V H + + Sbjct: 63 GPAGIYVAEVNSVKNSRGTTFVVMDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADYEE 122 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 TA + G C D +K GD ++ Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|3915009|sp|Q39827|SPE1_SOYBN RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC gi|1163181|gb|AAD09204.1| arginine decarboxylase [Glycine max] Length = 692 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 91/332 (27%), Gaps = 50/332 (15%) Query: 12 QKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59 L N L++ + + + +KC + + + ++ G + S Sbjct: 120 DVLKNRLESLQSAFDYAIQSGGYESHYQGVYPVKCNQDRFVVEDIVKFGSPFRFGLEAGS 179 Query: 60 LYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNT------VSQLNKFKDK 110 E++L + +KD E ++ + + NT +++ + Sbjct: 180 KPELLLAMSCLCKGNPDGLLICNGFKDAEYISLALVANKLALNTVIVVEQEEEVDLIVEL 239 Query: 111 AQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL------- 161 ++KL K GLR +S R + + ++ G+ Sbjct: 240 SKKLCIKPVIGLRAKLRTKHSGHFGGIFRRRGKFGLTTARVLRVVKNLDLAGMLDCLQLL 299 Query: 162 MFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----------- 207 FH + S I E + I +GGG+ Sbjct: 300 HFHIGSQIPSTALLADGVGEAAQIYCELVRLGANMRVIDIGGGLGIDYDGSKSCDSDISV 359 Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIV 261 + ++ ++ + E G AIV++ + L + S Sbjct: 360 EYGLEEYAAAVVHAVQCVCDRSVKHPVICSESGRAIVSHHSVLIFEAVGTSSTNGGGAPP 419 Query: 262 DSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293 S + + G Y + Sbjct: 420 ALSAHYLAEELSEDYGYLSELAFRGDYETCLV 451 >gi|171913043|ref|ZP_02928513.1| arginine decarboxylase [Verrucomicrobium spinosum DSM 4136] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 84/298 (28%), Gaps = 48/298 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYM---- 52 P + L ++ NA + + +K + + + +Y Sbjct: 65 PVLIRFGDLLRWRIEELNESFNNAIREANYKGVYRGVYPIKVNQQQEVIEEVTRYGRKYH 124 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLN 105 G + S E++ E + YKD E + ++ S+L+ Sbjct: 125 YGLEAGSKPELIAALAYMQDPEAYIVCNGYKDEEFIDLALRAQKMGLQVILVLEMPSELD 184 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSR-LGEKCKDKIESEI--------K 156 ++++ L L + +S + G + + Sbjct: 185 LILERSRLLGITPQLGVRIRLSTESAGHWSESGGDQSVFGLNISQVMRTVDVLREKGMLD 244 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---- 209 + L +H + ++ + + ++ + LGGG+ + Sbjct: 245 CLQMLHYHQGSQIPSIRAIRNAAVEAARVYVGLVQEGAKMGILDLGGGLAISYDGLKSNE 304 Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 V + + + + I E G AIV + L VLDI+ Sbjct: 305 TSSADYGMKEYCADVIEAISEVTDEAGIPHPNIISESGRAIVAYYSVLVINVLDINRY 362 >gi|57167760|ref|ZP_00366900.1| arginine decarboxylase [Campylobacter coli RM2228] gi|305432216|ref|ZP_07401380.1| arginine 2-monooxygenase [Campylobacter coli JV20] gi|57020882|gb|EAL57546.1| arginine decarboxylase [Campylobacter coli RM2228] gi|304444759|gb|EFM37408.1| arginine 2-monooxygenase [Campylobacter coli JV20] Length = 611 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 88/289 (30%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 +++ + + RK K + LK G L + G + S E+ Sbjct: 57 KQIESIYGSFNKARKEFNYKGKFNAVYPLKVNQYPGFVKNLVRLGKDYNYGLEAGSKAEL 116 Query: 64 MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L + +KD I A + + T+ +++L D A K Sbjct: 117 LLAMAYNNEDAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIVDIAKERFKP 176 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 IGLR+ S I A S+ G + IE+ + + FH Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 235 Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + L I E ++ I+LGGG+ + Sbjct: 236 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 295 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E + I++E G + N L VL++ Sbjct: 296 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLVAPVLELFSQEY 344 >gi|226328362|ref|ZP_03803880.1| hypothetical protein PROPEN_02256 [Proteus penneri ATCC 35198] gi|225203095|gb|EEG85449.1| hypothetical protein PROPEN_02256 [Proteus penneri ATCC 35198] Length = 546 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 33/294 (11%), Positives = 77/294 (26%), Gaps = 30/294 (10%) Query: 32 LLLALKCFAAWGMFDTLNQYM--DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID 87 L+ +K + ++L G + S E+M L H N I Sbjct: 9 LVYPIKVNQQRRVIESLINAGEPLGLEAGSKAELMAVLAHANMTSSVIVCNGYKDREYIR 68 Query: 88 -----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS- 141 L + ++ +S++ ++A++L L + ++ + Sbjct: 69 LALTGEKLGHKVFLVIEKMSEIKMVLEEAERLEVIPRLGVRARLASQGSGKWQASGGEKS 128 Query: 142 RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFI 190 + G ++ ++ L FH + + E Sbjct: 129 KFGLAATQVLQLIDMLRQAGRIDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHKLG 188 Query: 191 TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI------VTNTTTL 244 I++ +GGG+ + + C + +Y+ + G+A T Sbjct: 189 VNIQYFDVGGGLGVDYEGTRSQSDCS-VNYGLNEYANNVIWAIGDACDENDLPHPTVITE 247 Query: 245 NTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATIYPNTGPYTAMVCGRS 296 + L + ++ + G S Sbjct: 248 SGRALTAHHTVLISNVIGVERNEFTAITPPEEDAARPIASLWETWEEMQTKGHS 301 >gi|169245574|gb|ACA50833.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 38/153 (24%), Gaps = 21/153 (13%) Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +E I LGGG+ + D LK I +EPG + Sbjct: 3 GKPLETIDLGGGLGIPYFAGETPLDLEKVSAAIPDLKALLKAHPLVADAHIIVEPGRFLA 62 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288 V + + ++ H + + Sbjct: 63 GPAGIYVAEVNSVKNSRGTTFVLMDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADYEE 122 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 TA + G C D +K GD ++ Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|149570734|ref|XP_001506306.1| PREDICTED: similar to arginine decarboxylase, partial [Ornithorhynchus anatinus] Length = 142 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 Y++ + G +C + E +++GD ++FE++ Y + F P V Sbjct: 36 YSSSLWGPACDGPEPIAEGLRLPDLQVGDWLTFENMGAYTAGPASPF-SAARPRRIVY 92 >gi|6715492|gb|AAF26435.1| arginine decarboxylase [Brassica juncea] Length = 680 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 94/325 (28%), Gaps = 36/325 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L+ + + + +KC + + + ++ Sbjct: 97 PVIVRFPDVLKNRLECLQSAFDFAVQSQGYESHYQGVYPVKCNQDRFVVEDIVRFGSQFR 156 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E++L E +KD E ++ + NTV L + ++ Sbjct: 157 FGLEAGSKPEILLAMSCLCKGNNEAFLICNGFKDAEYVSLALLGRKLALNTVIVLEQEEE 216 Query: 110 K--------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-- 159 + IGLR +S + + G + K V Sbjct: 217 LDLGIDLSHKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVRKLVCLT 275 Query: 160 ---GLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 L FH + S + + E ++ I +GGG+ + Sbjct: 276 VSSFLHFHIGSQIPSTSLLSDGVSEAAQLYCELVRLGANMKVIDIGGGLGIDYDGSKSGE 335 Query: 214 FCQRLKEFSEKYSVQIYLE----PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269 + E+Y+ + V + + + I + L+ S H Sbjct: 336 SDLSVAYTLEEYAEAVVASVRFVCERRSVKHPVICSESGRAIVSHHSVLIFEAVSTVKHQ 395 Query: 270 PDYLLYQESATIYPNTGPYTAMVCG 294 D+ Q Y+A++ G Sbjct: 396 ADHDDIQFLLEGDDYEELYSAVMRG 420 >gi|182415277|ref|YP_001820343.1| arginine decarboxylase [Opitutus terrae PB90-1] gi|177842491|gb|ACB76743.1| arginine decarboxylase [Opitutus terrae PB90-1] Length = 645 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 25/227 (11%), Positives = 62/227 (27%), Gaps = 31/227 (13%) Query: 12 QKLLNNL----DTALYIRKNAGVKLLL----ALKCFAAWGMFDTL----NQYMDGTTSSS 59 L + + + K G K +K + D + Y G + S Sbjct: 71 DLLRHRVIQLNEMFQKAIKEEGYKGSYRGVFPIKVNQLREVVDEIVAAGKDYAFGLEAGS 130 Query: 60 LYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQ 112 E+M+ G + YKD + + I+ +++L+ A Sbjct: 131 KPELMIALAMHEGSQRLIICNGYKDHDYIRLALLGRKLGKKIIIVVEQLAELDDIIRLAA 190 Query: 113 KLHKKIGLRINPSVSYSKFILAD-PNRPFSRLGEKCKDKIES--------EIKNVNGLMF 163 + K + + ++ G + + + +++ + F Sbjct: 191 ETGVKPMIGFRAKLQTRGEGKWALSTGDNAKFGLNTAEILFAIEKLRAAKLTQSLRLIHF 250 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 H + + + + ++ +GGG+ Sbjct: 251 HIGSQVPNIITIKNAVIEATRFYCQLAKMGFPMGYLDVGGGLGIDYD 297 >gi|86152170|ref|ZP_01070382.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 260.94] gi|86153261|ref|ZP_01071465.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613374|ref|YP_001000453.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|167005396|ref|ZP_02271154.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|283957254|ref|ZP_06374715.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 1336] gi|315124287|ref|YP_004066291.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840955|gb|EAQ58205.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 260.94] gi|85842987|gb|EAQ60198.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249384|gb|EAQ72344.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|283791266|gb|EFC30074.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 1336] gi|315018009|gb|ADT66102.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 610 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 87/289 (30%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 +++ N RK G K + LK G L + G + S E+ Sbjct: 56 KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 115 Query: 64 MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L +KD I A + + T+ +++L D A K Sbjct: 116 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 175 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 IGLR+ S I A S+ G + IE+ + + FH Sbjct: 176 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 234 Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + L I E ++ I+LGGG+ + Sbjct: 235 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 294 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E + I++E G + N L VL++ Sbjct: 295 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 343 >gi|332969581|gb|EGK08599.1| arginine 2-monooxygenase [Kingella kingae ATCC 23330] Length = 629 Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 74/262 (28%), Gaps = 30/262 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL--NQYMDG 54 P L Q L + L + + A L+ +K + ++L + G Sbjct: 58 PILLCFPQILQHRLRSINQAFQAAREDFGYNGNYCLVYPIKVNQHRRVIESLIHSNQPHG 117 Query: 55 TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + S E+M G +T YKD E + + + K + Sbjct: 118 LEAGSKAELMAVLAHAGTTQTLIVCNGYKDREYIRFALMGEKLGHKVYLVIEKLSEIQMV 177 Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNV 158 L + L + P S S+ G ++ + + + Sbjct: 178 LEEAAKLGVKPRLGVRARLASQGSGKWQASGGDKSKFGLSASQVLQLVELLKQNNHLDCL 237 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + E I+ +GGG+ + + C Sbjct: 238 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIQCFDVGGGLGVDYEGNRTQSDC 297 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ + G+A Sbjct: 298 S-VNYSLSEYASTVVWGIGQAC 318 >gi|86150176|ref|ZP_01068403.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597564|ref|ZP_01100798.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 84-25] gi|85839292|gb|EAQ56554.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190156|gb|EAQ94131.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 84-25] gi|315058218|gb|ADT72547.1| Arginine decarboxylase [Campylobacter jejuni subsp. jejuni S3] gi|315928309|gb|EFV07625.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 610 Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 87/289 (30%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 +++ N RK G K + LK G L + G + S E+ Sbjct: 56 KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 115 Query: 64 MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L +KD I A + + T+ +++L D A K Sbjct: 116 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 175 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 IGLR+ S I A S+ G + IE+ + + FH Sbjct: 176 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 234 Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + L I E ++ I+LGGG+ + Sbjct: 235 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 294 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E + I++E G + N L VL++ Sbjct: 295 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 343 >gi|148926933|ref|ZP_01810610.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp. jejuni CG8486] gi|157415035|ref|YP_001482291.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81116] gi|145845017|gb|EDK22114.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp. jejuni CG8486] gi|157385999|gb|ABV52314.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81116] gi|307747674|gb|ADN90944.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni M1] gi|315931179|gb|EFV10151.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 327] Length = 610 Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 87/289 (30%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 +++ N RK G K + LK G L + G + S E+ Sbjct: 56 KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 115 Query: 64 MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L +KD I A + + T+ +++L D A K Sbjct: 116 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 175 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 IGLR+ S I A S+ G + IE+ + + FH Sbjct: 176 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 234 Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + L I E ++ I+LGGG+ + Sbjct: 235 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 294 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E + I++E G + N L VL++ Sbjct: 295 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 343 >gi|145520869|ref|XP_001446290.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124413767|emb|CAK78893.1| unnamed protein product [Paramecium tetraurelia] Length = 318 Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 71/259 (27%), Gaps = 26/259 (10%) Query: 99 NTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV 158 SQ+ + A ++ + I L K +I+ + Sbjct: 39 EFKSQVQIIQKIAPQMKILWRISIVEENPGQMATLFSGKFGDDVPNLDAAHKRFKQIQQM 98 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQR 217 + + S + S+ + + G IH Sbjct: 99 GIQLHGIHFHCGSAVQGSSSFGKTIDLAQDYGVVRYRRGFPTGNIHEN-------AIKAL 151 Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 + ++ ++ EPG N+ +L +L L + H + +L Sbjct: 152 KRTENDPLGYEVIAEPGRHFSANSCSLLFRILTKRIKHGRLCYHVNESLYHSFNSILMDG 211 Query: 278 SATIYPNTGPYTA-----------------MVCGRSCLAGDIFGEFHFEK-PVKIGDRIS 319 + N Y+ + G +C D+ + +GD + Sbjct: 212 ISFENLNDQFYSVLNSDESQNSQISDQSNVSIFGMTCDGADVIANNITVPTDMNVGDWLC 271 Query: 320 FEDVAGYNINRKNWFNGIN 338 + + Y I K+ FNG+ Sbjct: 272 MQGMGSYTIGPKSTFNGMK 290 >gi|6646840|emb|CAB64599.1| arginine decarboxylase 1 [Datura stramonium] Length = 724 Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 68/230 (29%), Gaps = 35/230 (15%) Query: 12 QKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59 L N L++ A + + +KC + + + ++ G + S Sbjct: 124 DVLKNRLESLQSAFDMAVHSQGYEAHYQGVYPVKCNQDRFVVEDIVKFGSPYRFGLEAGS 183 Query: 60 LYEVMLG---HEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDK 110 E++L K + +KD E ++ I+ +L+ D Sbjct: 184 KPELLLAMSCLSKGSADALLVCNGFKDTEYISLALVARKLLLNTVIVLEQEEELDLVIDI 243 Query: 111 AQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNG 160 ++K+ IGLR +S + + G + + Sbjct: 244 SRKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVKKLDESGMLDCLQL 302 Query: 161 LMFHNNCENKSFL---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 L FH + S I E +++I +GGG+ Sbjct: 303 LHFHIGSQIPSTDLLADGVGEATQIYSELARLGAGMKFIDIGGGLGIDYD 352 >gi|57237609|ref|YP_178857.1| arginine decarboxylase [Campylobacter jejuni RM1221] gi|57166413|gb|AAW35192.1| arginine decarboxylase [Campylobacter jejuni RM1221] Length = 611 Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 87/289 (30%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 +++ N RK G K + LK G L + G + S E+ Sbjct: 57 KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 116 Query: 64 MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L +KD I A + + T+ +++L D A K Sbjct: 117 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 176 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 IGLR+ S I A S+ G + IE+ + + FH Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 235 Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + L I E ++ I+LGGG+ + Sbjct: 236 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 295 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E + I++E G + N L VL++ Sbjct: 296 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 344 >gi|308048328|ref|YP_003911894.1| arginine decarboxylase [Ferrimonas balearica DSM 9799] gi|307630518|gb|ADN74820.1| arginine decarboxylase [Ferrimonas balearica DSM 9799] Length = 633 Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 76/299 (25%), Gaps = 47/299 (15%) Query: 5 PYYLIDKQKLLNNLD----TALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---D 53 P + + L + + + G K + +K + L Sbjct: 61 PLLVRFPEILHSQVQGLCGAFRNAISDYGYKGDYLAVYPIKVNQQRSVVTELIAGGREQL 120 Query: 54 GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 G + S E+M + YKD E + + + + K + Sbjct: 121 GLEAGSKGELMAVLAMAQDAASVIVCNGYKDREYVRLALIGQKMGYEVYLVIEKMSELDL 180 Query: 113 KLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEIK--------N 157 L + L + P S K S+ G ++ + Sbjct: 181 VLEEGRKLGVIPRLGVRARLASQGKGKWQSSGGEKSKFGLSAAQILKLVERLRAEGQLDC 240 Query: 158 VNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------- 207 + L FH + + E + + +GGG+ + Sbjct: 241 LQLLHFHLGSQMSNIRDIQKGLTECGRFYMELRKIGAPVAIVDVGGGLGVDYEGTRSQSS 300 Query: 208 ---DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++++ + Q E G A+ + L V+ + Sbjct: 301 CSVNYSLQEYANNVVYAIGDVCRQYQLPHPRLISESGRAMTAHHAVLIADVIGVEAYQP 359 >gi|297569192|ref|YP_003690536.1| arginine decarboxylase [Desulfurivibrio alkaliphilus AHT2] gi|296925107|gb|ADH85917.1| arginine decarboxylase [Desulfurivibrio alkaliphilus AHT2] Length = 643 Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 28/258 (10%), Positives = 70/258 (27%), Gaps = 33/258 (12%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYMDGTTSSS 59 L N + A + + +K + + + + Y G S Sbjct: 74 DLLRNRVARINRAFSEAIAEAEYRNQYRGVYPVKVNQLREVVEEILDAGHDYHHGLEVGS 133 Query: 60 LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQ 112 E+ ++ YKD + V ++ V ++ + Sbjct: 134 KPELHAALALHEDPDSLIVCNGYKDEDYVRVALIGRKLGKKVILVVEKVEEIRQIIAMVN 193 Query: 113 KLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMF 163 K+ + + +S K A+ ++ G D + + + + F Sbjct: 194 KMKVEPLIGFRVRLMSGGKGKWAESGGENAKFGLSTIDIMRASRLLQEANMAHCLKLVHF 253 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219 H + L ++ + +E++ +GGG+ F + Sbjct: 254 HIGSQVPDILTIKKAVREGAMFYAKLSKLAHPGLEYLDVGGGLGVDYDG-SRTTFHSSIN 312 Query: 220 EFSEKYSVQIYLEPGEAI 237 +Y+ + + Sbjct: 313 YSLNEYARDVIYNIMDVC 330 >gi|218562392|ref|YP_002344171.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|112360098|emb|CAL34892.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926010|gb|ADC28362.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni IA3902] Length = 611 Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 87/289 (30%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 +++ N RK G K + LK G L + G + S E+ Sbjct: 57 KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 116 Query: 64 MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L +KD I A + + T+ +++L D A K Sbjct: 117 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 176 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 IGLR+ S I A S+ G + IE+ + + FH Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 235 Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + L I E ++ I+LGGG+ + Sbjct: 236 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 295 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E + I++E G + N L VL++ Sbjct: 296 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 344 >gi|94499816|ref|ZP_01306352.1| arginine decarboxylase [Oceanobacter sp. RED65] gi|94428017|gb|EAT12991.1| arginine decarboxylase [Oceanobacter sp. RED65] Length = 647 Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 26/251 (10%), Positives = 74/251 (29%), Gaps = 32/251 (12%) Query: 11 KQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58 + L + A + + +K + + + + G + Sbjct: 78 ENLLDARISALNEAFARAIQSYQYGNVYRGVFPIKVNQQCHVVEEIADFGSRYHHGLEAG 137 Query: 59 SLYEVMLGHEKF-GGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKA 111 S E+++ K E+ YKD E + + ++ +L +++ Sbjct: 138 SKAELIIALSKLHDNESMIVCNGYKDAEFIELGLYAKEMGINCIFVLESLKELPIILERS 197 Query: 112 QKLHKKIGLRINPSVS-YSKFILADPNRPFSRLGEK-------CKDKIESEIKN-VNGLM 162 + L + L + S + + S G ++ ++ + + + L Sbjct: 198 EALGIEPLLGVRIRSSVTVDGHWNEDSGDRSIFGMSTHSLVRVVEELKQANMLHCLQLLH 257 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219 H + + + + + + ++ LGGG+ + + + Sbjct: 258 CHLGSQIPNIRNIRMGVMEACRFYSGLIEQGAPMGYLDLGGGLAVDYEG-ASSNHTHSMN 316 Query: 220 EFSEKYSVQIY 230 ++Y I Sbjct: 317 YQLDEYCNNIV 327 >gi|78778431|ref|YP_396543.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9312] gi|123554841|sp|Q31DD8|SPEA_PROM9 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|78711930|gb|ABB49107.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9312] Length = 648 Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 95/313 (30%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L + ++ A + + +KC + + + ++ Sbjct: 69 PLIIRFNDILKDRINALHDSFFKAIKTYKYKNIYQGVFPVKCNQQKNVLEKIIEFGSQWN 128 Query: 54 -GTTSSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105 G S E+++G + YKD + + + I+ ++ Sbjct: 129 FGLEVGSKSELLIGLALLENQNSLLICNGYKDKKYIEIATLARKLGKNPIIVIEQRDEVK 188 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156 + Q+L+ + I +S S+ G + + + I Sbjct: 189 RIIQAVQELNATPLIGIRAKLSSKSSGRWGKSIGDNSKFGLSIPEIMLTIKELKEANLIN 248 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK------ 207 + L FH + L+ + E +++I +GGG+ Sbjct: 249 EMKLLHFHIGSQISDIAVIKDALQEASQIYVELCKLGAPMQYIDVGGGLGIDFDGTKTSS 308 Query: 208 ----DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++++ + + I E G AI+++ + L VL S Sbjct: 309 NTSTNYSLQNYANDVIATIKDSCELNNIKHPIIISESGRAIISHCSVLIFNVLGTSHVSS 368 Query: 257 NLVIVDSSVEAHV 269 L I D + + Sbjct: 369 KLQIFDKKNQQLI 381 >gi|311693163|gb|ADP96036.1| biosynthetic arginine decarboxylase [marine bacterium HP15] Length = 636 Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 38/323 (11%), Positives = 82/323 (25%), Gaps = 56/323 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-------N 49 P + L + ++ G + +K + + L + Sbjct: 61 PVLVRFVDILHDRVNKLCNAFNKVAEEHAYQGGYTAVYPIKVNQQRRVVEELLAAEPAAS 120 Query: 50 QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E+M L + G N I L + I+ S Sbjct: 121 NGQIGLEAGSKPELMAVLAMSQQPGSVIVCNGYKDREYIRLALIGQTLGHRVFIVVEKKS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEI------ 155 +L ++A+ L + + ++ + S+ G ++ Sbjct: 181 ELPLILEEAKSLGVSPLIGVRARLATIGKGNWQNTGGEKSKFGLSASQVLDVVDTLREAG 240 Query: 156 --KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + L FH + + E I + +GGG+ + Sbjct: 241 ALDTLQLLHFHLGSQIANIRDIQTGLRECARFYSELRQMGAPIGTVDIGGGLGVDYEGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE 253 + L+ +++ + E G A+ + + L T V+D Sbjct: 301 SRSSCSMNYSVYEYAYNVVHVLQAECDRHGTPHPDLISESGRALTAHHSVLVTNVIDHEA 360 Query: 254 NIKNLVIVDSSV-----EAHVPD 271 + D Sbjct: 361 PENRTPQQPGATASAPLHDLWRD 383 >gi|33340101|gb|AAQ14538.1|AF306451_1 arginine decarboxylase [Pinus sylvestris] Length = 551 Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 68/236 (28%), Gaps = 33/236 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + L++ + + + +KC + + + ++ Sbjct: 56 PLIIRFPDVLKHRLESLQSAFDSAMRMQSYESYFQGVYPVKCNQDRYVVENIVEFGKPYA 115 Query: 53 DGTTSSSLYEVMLGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E++L + YKD E ++ + FN V L + ++ Sbjct: 116 FGLEAGSKPELLLAMASMCKASPKALLVCNGYKDEEYISLALTARRLNFNCVIVLEQEEE 175 Query: 110 KAQKLHKKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIESEI------- 155 L+ L + P + + + G + + Sbjct: 176 LDLVLNVSRKLSVRPVIGVRAKLRTKHGGHFGATSGEKGKFGLTSLEIVGIVRKLQKLGM 235 Query: 156 -KNVNGLMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + + I E ++ I +GGG+ + Sbjct: 236 LDCLQLLHFHIGSQIPCVEVLNDGVSEAAYIYSELAKLGANMKIIDIGGGLGIDYE 291 >gi|153952578|ref|YP_001398308.1| arginine decarboxylase [Campylobacter jejuni subsp. doylei 269.97] gi|152940024|gb|ABS44765.1| arginine decarboxylase [Campylobacter jejuni subsp. doylei 269.97] Length = 610 Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 87/289 (30%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 +++ N +K G K + LK G L + G + S E+ Sbjct: 56 KQIENIYGNFNKAKKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 115 Query: 64 MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L +KD I A + + T+ +++L D A K Sbjct: 116 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 175 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 IGLR+ S I A S+ G + IE+ + + FH Sbjct: 176 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKFLEQFTMIHFHLG 234 Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + L I E ++ I+LGGG+ + Sbjct: 235 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKNRNYTLREY 294 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E + I++E G + N L VL++ Sbjct: 295 ANDVIFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 343 >gi|157888667|emb|CAP09405.1| antizyme inhibitor 1 [Danio rerio] Length = 230 Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 30/198 (15%) Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDF 214 V G+ F K ++ L + F + + +GGG ++ Sbjct: 7 VAGVTFQVPASCKDPQAYTHALSDARCIFDMGKELGFDMNILDIGGGFSGSEFQLKQVHS 66 Query: 215 CQ---RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHV 269 F + V I EPG V + TL V+ + D + Sbjct: 67 VIRPLLEAYFPSESGVSIIAEPGNFFVFSCFTLAVNVIGKKAAYRNLHTSTHDKLTSSDA 126 Query: 270 PDYLLYQ----------------------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFH 307 P+++ Y ++ + +++ + G SC D E Sbjct: 127 PEFVYYMNDGVYGSFMGRLFGNIISTPSVHKMSLTLDEPVFSSSLWGPSCDPLDQVVERC 186 Query: 308 FEKPVKIGDRISFEDVAG 325 + +GD + F ++ Sbjct: 187 LLPELAVGDWLVFSNMGA 204 >gi|195976673|dbj|BAG68575.1| arginine decarboxylase [Prunus persica] Length = 725 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 68/236 (28%), Gaps = 33/236 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ + + + +KC + + + ++ Sbjct: 112 PLIVRLPDVLKNRLESLQGAFDLAIQSHDYGSHYQGVFPVKCNQDRFVVEDIVRFGSPFR 171 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E++L E +KD E ++ + NTV L + ++ Sbjct: 172 FGLEAGSKPELLLAMSCLCKGNPEALLICNGFKDFEYISLALFARKLALNTVIVLEQEEE 231 Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPF-------SRLGEKCKDKIESEI------- 155 + L + P + + + F + G + Sbjct: 232 LDVVIDLSKKLGVRPVIGARAKLKTKHSGHFGSTSGEKGKFGLTTTQILRVVKKLDQLGL 291 Query: 156 -KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 L FH + S + I E +++I +GGG+ Sbjct: 292 LDCFQLLHFHIGSQIPSTALLADGVSEAAQIYCELVRLGAHMKFIDIGGGLGIDYD 347 >gi|225012423|ref|ZP_03702859.1| Orn/DAP/Arg decarboxylase 2 [Flavobacteria bacterium MS024-2A] gi|225003400|gb|EEG41374.1| Orn/DAP/Arg decarboxylase 2 [Flavobacteria bacterium MS024-2A] Length = 465 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 48/407 (11%), Positives = 110/407 (27%), Gaps = 61/407 (14%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG 54 TP + K+ + A + + K + D + Sbjct: 43 GTPLKVTYLPKISEKIKHAKALFQKTISALNYEGAYNYCYCTKSAHFSHILDEALKNDIH 102 Query: 55 TTSSSLYEVMLGHEKFGGETHA---YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK- 110 +SS +++ + + + + + + + I + + + Sbjct: 103 IETSSAFDIEIVKKLKAQGKITQNTFVICNGFKRDQYIENIAELINSGDYNCIPIIDNYD 162 Query: 111 -------AQKLHKKIGLRINPSVSYSKFILADPNRPF--SRLGEKCKDKIESEIKNVNGL 161 +IG+RI + + ++ + + L Sbjct: 163 EIQLLDGQINRPFQIGIRIASEEEPKFEFYTSRLGIGYKNIVPFYKREIKTNPKLELKML 222 Query: 162 MFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKD 208 F N K + L+ E + +++GGG + Sbjct: 223 HFFINTGIKDNSYYWNELQKCLNVYVELKKNCHSLTDLNIGGGFPTKDSLGFDFDYEYMI 282 Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVE 266 + + + Q + I+ E G V + + VL + +++SS Sbjct: 283 FEIINLIQTVCNEGGVPVPNIFTEFGSYTVGESGAIFYEVLYQKQQNDREKWNMINSSFI 342 Query: 267 AHVPDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEF---------HFEK--P 311 +PD + + N ++ G +C + D + F + P Sbjct: 343 TTLPDSWAINKRFMMLPINHWNQPYERVLLGGLTCDSDDYYNNEQHVNAIYLPVFPQKKP 402 Query: 312 VKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353 + IG F + Y + F G I P + + T + Sbjct: 403 LYIG----FFNTGAYQESLG-GFGGLQHCLIPQPKHILIHKTETGEL 444 >gi|46397625|gb|AAR00209.1| ornithine decarboxylase [Magnaporthe grisea] Length = 286 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 71/284 (25%), Gaps = 39/284 (13%) Query: 54 GTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 G +S E+ + Y K ++ + +K Sbjct: 1 GFDCASKTEIEQVLDMGVNPARIIYAQPCKTNSYVRYVAGEGVRQMTFDNADELYKIAKL 60 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 ++ LRI S S L+ + NV G+ FH Sbjct: 61 FPEAELYLRILTDDSSSLCRLSLKFGAALDATDGLLALARELGLNVVGVSFHVGSGASDP 120 Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSV 227 L F +++ F ++ + +GGG D + + FS V Sbjct: 121 LAFLNAVRDANFVFEQAAADGFDMKTLDVGGGFCSDDTFEAMAGVLRDALDEYFSPHRGV 180 Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIK--------------NLVIVDSSVEAHVPDYL 273 + EPG V+ T+ V+ +V V+ + + + Sbjct: 181 SLIAEPGRYFVSAAFTIACNVIARRTVEDPNGSVYGSLAAAASYMVYVNDGLYGNFRSIM 240 Query: 274 LYQESAT-------------------IYPNTGPYTAMVCGRSCL 298 + + + G +C Sbjct: 241 FDHQHPVAKVLRSSGNFFYNTTDADSPETPSEGIEYSIWGPTCD 284 >gi|169245576|gb|ACA50834.1| LysA [Agrobacterium tumefaciens] gi|169245578|gb|ACA50835.1| LysA [Agrobacterium tumefaciens] gi|169245582|gb|ACA50837.1| LysA [Agrobacterium tumefaciens] gi|169245584|gb|ACA50838.1| LysA [Agrobacterium tumefaciens] gi|169245586|gb|ACA50839.1| LysA [Agrobacterium tumefaciens] gi|169245588|gb|ACA50840.1| LysA [Agrobacterium tumefaciens] gi|169245590|gb|ACA50841.1| LysA [Agrobacterium tumefaciens] gi|169245592|gb|ACA50842.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 38/153 (24%), Gaps = 21/153 (13%) Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +E I LGGG+ + D ++ I +EPG + Sbjct: 3 GRPLETIDLGGGLGIPYFAGETPLDLAAVSAAIPDLKALVQAHPLIADAHIIVEPGRFLA 62 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288 V + + +V H + + Sbjct: 63 GPGGIYVAEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADYEE 122 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 TA + G C D +K GD ++ Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|54778600|gb|AAV39553.1| ornithine decarboxylase [Oryza sativa Japonica Group] Length = 457 Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 47/167 (28%), Gaps = 7/167 (4%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65 + +ID ++ + GV+ A+KC + L G +S E+ Sbjct: 63 FNVIDLGEVARLFAAWWRGLR--GVRPYYAVKCNPNPALLGALAGLGAGFDCASRAEMEA 120 Query: 66 GHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + Y + A D F++ ++ K K + ++ Sbjct: 121 VLALGVAADRVVYANPCKLEPHLEYAAGVGVDLTTFDSEEEVGKIKRCHPGCRLLLRIKA 180 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNC 167 +L + + E + V G+ FH Sbjct: 181 PDGDDGGGAMLNLGTKYGAHRDEVVPLLAAARRAGMAVVGVPFHAGS 227 >gi|268679913|ref|YP_003304344.1| arginine decarboxylase [Sulfurospirillum deleyianum DSM 6946] gi|268617944|gb|ACZ12309.1| arginine decarboxylase [Sulfurospirillum deleyianum DSM 6946] Length = 616 Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 78/300 (26%), Gaps = 45/300 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEV 63 +++ + ++ + + LK L G + S E+ Sbjct: 56 KQIRMIYKSFSDAKREFNYEGSFNAVYPLKVNQFPNFVKNLVSLGQKYNYGLEAGSKAEL 115 Query: 64 MLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L +KD E+ A + + T+ +++L A Sbjct: 116 LLAMAYNNPNAPITVNGFKDNEMISLGFIAAEMGHNITLTIEGINELESIISIAKDRFGC 175 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNN 166 IGLRI S I A S+ G + +E+ + FH Sbjct: 176 VPNIGLRIRLHSSGIG-IWAKSGGINSKFGLTSTELLEAVNMIRDANLLEKFTMIHFHIG 234 Query: 167 CENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQR----- 217 + L+ + + I+LGGG+ + Sbjct: 235 SQITDIAPLKKALREAGNIYAELCRMGATNLRAINLGGGLAVEYSQHKTTLHKNYSLSEY 294 Query: 218 ----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA 267 + I++E G + + L VL++ + Sbjct: 295 ANDVVYLLKDIANRKNVSEPDIFIESGRFVAAHHAVLVAPVLELFSQEYTDQKLHLKENN 354 >gi|126664242|ref|ZP_01735234.1| arginine decarboxylase, biosynthetic [Flavobacteria bacterium BAL38] gi|126623774|gb|EAZ94470.1| arginine decarboxylase, biosynthetic [Flavobacteria bacterium BAL38] Length = 469 Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 52/408 (12%), Positives = 115/408 (28%), Gaps = 63/408 (15%) Query: 3 KTPY-YLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMD 53 TP + K+ N++ + G + K + + + Sbjct: 42 GTPLKFTY-LPKISQNINRAKMWFRNSMEKHGYEAKYFYCYCTKSSHFEFILNEALKNNI 100 Query: 54 GTTSSSLY-----EVMLGHEKFGGETHAYNVAYKDCEI----DAVLSNCDTIIFNTVSQL 104 +SS + E ++ K + +K + +++N + Sbjct: 101 HIETSSAFDIDIVENLMAQGKINKNSFVVCNGFKRAQYVTNIARLINNGHKNTIPVIDNF 160 Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNG 160 + +++ K + I + +R L K +++ + Sbjct: 161 EELDLLQEEIDGKFKIGIRIAAEEEPKFEFYTSRLGIGYKDILPFYRKQIADNKKVELKM 220 Query: 161 LMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIH----------FTDK 207 L F N + + + ++ +++GGG + Sbjct: 221 LHFFINAGIRDTAYYWNELLKCMKVYIALKKECPSLDSLNIGGGFPIKNSLAFDYDYQYM 280 Query: 208 DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSV 265 + + + + +E I+ E G V VL + +N ++DSS Sbjct: 281 VDEILNQIKIACDDAEVEVPHIFTEFGSFTVGEAGGALYQVLYQKKQNDRENWNMIDSSF 340 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEK 310 +PD + A N ++ G +C D +++ EK Sbjct: 341 ITTLPDTWAINKRFVMMAVNRWNDTYERVLLGGLTCDGDDYYNSEQHMNAVYLPKYNKEK 400 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353 P+ IG F + Y F G + P + + D Sbjct: 401 PLYIG----FFNTGAYQETIG-GFGGLSHCILPQPKHILIDKDKNGII 443 >gi|95929080|ref|ZP_01311825.1| arginine decarboxylase [Desulfuromonas acetoxidans DSM 684] gi|95134981|gb|EAT16635.1| arginine decarboxylase [Desulfuromonas acetoxidans DSM 684] Length = 632 Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 42/359 (11%), Positives = 97/359 (27%), Gaps = 56/359 (15%) Query: 11 KQKLLNNL----DTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYMD----GTTSS 58 + L + + +T AG + +K + + + ++ G + Sbjct: 71 ENLLQSRIVYLNETFRGAIAAAGYQGRYRGVFPVKVNQQCQIIEEICRFGAPYQHGLEAG 130 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQ 112 S E++L YKD E + + + ++L +++ Sbjct: 131 SKAELVLALANLTPGGLLVLNGYKDREFIDLGLWAHKLGHPCFFVIESPAELELLIERSH 190 Query: 113 KLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMF 163 +L+ + + +S + + + S G + I + L Sbjct: 191 QLNVRPHIGARIKISTQVSGMWTETSGDRSSFGLSSTQLLAMVETLQAAEMIDCLEMLHC 250 Query: 164 HNNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDK----------DYP 210 H + ++ + + ++ LGGG+ +Y Sbjct: 251 HLGSQIPCLEDIGRGVEEACRYYINLCREGAPMGYLDLGGGLAVDYSGRCSGDGHSRNYS 310 Query: 211 VKDFCQRLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD- 262 ++D+CQ + I E G A V ++ L +LD+ + + Sbjct: 311 LEDYCQAIVTTIAATLDNTGIAHPHIVTESGRATVAYSSMLLFNILDVMHFEADPLPQPF 370 Query: 263 --------SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313 + + G+ L GE F + Sbjct: 371 PANEAEILQEQHRFFTTLNGHDYHQAVILRDRMRQQFRDGQLSLRQRTLGENLFLATAQ 429 >gi|125595934|gb|EAZ35714.1| hypothetical protein OsJ_20004 [Oryza sativa Japonica Group] Length = 651 Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 75/262 (28%), Gaps = 30/262 (11%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLNQYM----DGTTS 57 +++ D + Y ++ G + + +KC + + + ++ G + Sbjct: 65 FFVNDDGDVAALNAAFDYAVRSTGYGGRYQGVYPVKCNQDRHVVEDIVEFGEPFRFGLEA 124 Query: 58 SSLYEVMLGH----EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 S E++L + + YKD E ++ T+ NTV L + ++ Sbjct: 125 GSKPELLLAMSCLAARGNPDALLICNGYKDDEYVSLALIARTMGLNTVIVLEQEEELDIV 184 Query: 114 LHKKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 + L + P V + + G + + + Sbjct: 185 VDASRRLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNAAQILSVVAKLKTLGMLDCL 244 Query: 159 NGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 L FH + + I E + I +GGG+ Sbjct: 245 QLLHFHIGSQIPTTALLGDGVGEAAQIYCELARLGAAMRVIDVGGGLGIDYDGSHSAQTD 304 Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237 + E+Y+ + G Sbjct: 305 MSVAYSLEEYAAAVVAAVGRVC 326 >gi|126695386|ref|YP_001090272.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9301] gi|166220850|sp|A3PA96|SPEA_PROM0 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|126542429|gb|ABO16671.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str. MIT 9301] Length = 648 Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 94/313 (30%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L + ++ A + + +KC + + + + Sbjct: 69 PLIIRFNDILKDRINALHDSFFKAIKTYKYKNIYQGVFPVKCNQQKNVLEKIIDFGSQWN 128 Query: 54 -GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105 G S E+++G + YKD + + + I+ ++ Sbjct: 129 FGLEVGSKSELLIGLALLENHNSLLICNGYKDKKYIEIATLARKLGKNPIIVIEQRDEVK 188 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156 + Q+L+ + I +S S+ G + + + I Sbjct: 189 RIIQAVQELNATPLIGIRAKLSSKSSGRWGKSIGDNSKFGLSIPEIMLTIKELKEANLIN 248 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK------ 207 + L FH + L+ + E +++I +GGG+ Sbjct: 249 EMKLLHFHIGSQISDIAVIKDALQEASQIYVELCKLGAPMQYIDVGGGLGIDFDGTKTSS 308 Query: 208 ----DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++++ + + I E G AI+++ + L VL S Sbjct: 309 NTSTNYSLQNYANDVIATIKDSCELNNIKHPTIISESGRAIISHCSVLIFNVLGTSHVSS 368 Query: 257 NLVIVDSSVEAHV 269 L I D + + Sbjct: 369 KLQIFDKKNQQLI 381 >gi|54295989|ref|YP_122358.1| arginine decarboxylase [Legionella pneumophila str. Paris] gi|53749774|emb|CAH11154.1| hypothetical protein lpp0006 [Legionella pneumophila str. Paris] Length = 630 Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 42/330 (12%), Positives = 94/330 (28%), Gaps = 47/330 (14%) Query: 12 QKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMD---GTTSSSLYEVM 64 ++ R++ +L+ +K + L + D G + S E+M Sbjct: 69 DRVHRIYQAFTQAREDTYYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLEAGSKPELM 128 Query: 65 LGHEKFGGETHAY-NVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 G YKD + + I+ S+L+ ++ +L K Sbjct: 129 AVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQMGHKVFIVIEKKSELDIILKESARLQIK 188 Query: 118 IGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCE 168 L + VS S + S+ G K + + + + H + Sbjct: 189 PTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQLMHCHLGSQ 248 Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDK----------DYPVKDFC 215 + ++ + + I I +GGG+ + +Y + ++ Sbjct: 249 IANIHDIRHCMQEVARYYIELRQLNAPISTIDVGGGLSVDYEGTRSNKGCSMNYSLVEYA 308 Query: 216 QRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNL--VIVDSSVE 266 + + + E G A+ + L + + D+ K + Sbjct: 309 THIMLALKHLCQEAEIPEPDLISESGRALTAHHAVLVSNITDVEIINKAPVLPEISEDDS 368 Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 + D +Y I ++ S Sbjct: 369 HVIRD--IYDTYQAITDSSPTEIYNYAAHS 396 >gi|169245558|gb|ACA50825.1| LysA [Agrobacterium tumefaciens] gi|169245566|gb|ACA50829.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 36/153 (23%), Gaps = 21/153 (13%) Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY-----------LEPGEAIV 238 +E I LGGG+ + ++ +EPG + Sbjct: 3 GRPLETIDLGGGLGIPYFAGETPLDLAAVSAAIPDLKALMHAHPLIANAHIIVEPGRFLA 62 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288 V + + +V H + + Sbjct: 63 GPGGIYVAEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADNEE 122 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 TA + G C D +K GD ++ Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|254447620|ref|ZP_05061086.1| arginine decarboxylase [gamma proteobacterium HTCC5015] gi|198262963|gb|EDY87242.1| arginine decarboxylase [gamma proteobacterium HTCC5015] Length = 633 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 30/297 (10%), Positives = 75/297 (25%), Gaps = 45/297 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIR--------KNAGVKLLLALKCFAAWGMFDTL--NQYMDG 54 P + L + ++ + +K + + L G Sbjct: 66 PVLVRFNDILRDRVERLYQAFCHALTQREMAPHYTPIYPIKVNQQASVVEALLKADAPLG 125 Query: 55 TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------KFK 108 + S E+ YKD E + + + Sbjct: 126 LEAGSKAELAAVIASAPAGATIICNGYKDREYIRMALIAKHMGHACYLVIEQSSELTLVN 185 Query: 109 DKAQKLHKKIGLRINPSVSYSKF-ILADPNRPFSRLGEKCKDK--------IESEIKNVN 159 + +++L L + ++ + + G + S+++ + Sbjct: 186 EVSRQLDIAPLLGLRIRLATLGTGRWQNSGGEGGKFGLTAAEAYRLIEDLKQSSQLECLK 245 Query: 160 GLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------- 207 L H + + + + ++ + +GGG+ + Sbjct: 246 LLHVHMGSQIAELSAIEQGVREICQFYADLCALGAPLDTLDIGGGLGVDYEGSANHSEFS 305 Query: 208 -DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 Y + + + + Q++ E G A+ + L T V DI Sbjct: 306 MGYTLSGYAEAVVATVHGAMQSARLPMPQLFSESGRALTAHHAVLLTEVGDIESPFN 362 >gi|218883962|ref|YP_002428344.1| Orn/DAP/Arg decarboxylase 2 [Desulfurococcus kamchatkensis 1221n] gi|218765578|gb|ACL10977.1| Orn/DAP/Arg decarboxylase 2 [Desulfurococcus kamchatkensis 1221n] Length = 592 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 84/281 (29%), Gaps = 41/281 (14%) Query: 11 KQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYE 62 ++ + + + K G K + +K + D + +Y G + SL E Sbjct: 71 ERAIRTVYEAFTELAKVHGFKGSLQPVFPMKVNPIEVVIDAIWRYGEKYKWGFNTGSLGE 130 Query: 63 VMLGHEKF--GGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 + L + GG Y+ D + I + L+ ++ Sbjct: 131 LELLSKYLEKGGRILIYDGVVSDSVMKILVRFKENGWRVIIDVESEHDLDIL---SKYPE 187 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNVN----GLMFHNNCEN 169 +IGLRI P A + G + E K + L H + Sbjct: 188 FEIGLRIKPLFRPGG-KWAHSAGLEGKFGLTVNTLVKLREEYKWIEERGRLLHIHPGSQI 246 Query: 170 KSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDY-------PVKDFCQRL 218 + A + + F H IE + LGGG+ + D P + Sbjct: 247 YKWSDMEAFINEVYNIFTQLQSHGFPSIEIVDLGGGLAYPYLDTRDGTIESPDYGLIEYF 306 Query: 219 KEFSE-----KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 + + + E G IV+ L V+DI Sbjct: 307 NHILKIFSRLEKHPTLVYEGGRYIVSAHRILVAKVVDIRPY 347 >gi|123967583|ref|YP_001008441.1| arginine decarboxylase [Prochlorococcus marinus str. AS9601] gi|166220853|sp|A2BNH3|SPEA_PROMS RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|123197693|gb|ABM69334.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str. AS9601] Length = 648 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 94/313 (30%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L + ++ A + + +KC + + + ++ Sbjct: 69 PLIIRFNDILKDRINALHDSFLKAIKTYKYKNIYQGVFPVKCNQQKNVLEKIIEFGSQWN 128 Query: 54 -GTTSSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105 G S E+++G + YKD + + + I+ ++ Sbjct: 129 FGLEVGSKSELLIGLALLENQNSLLICNGYKDKKYIEIATLARKLGKNPIIVIEQRDEVK 188 Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156 + Q+L + I +S S+ G + + + I Sbjct: 189 RIIQAVQELKATPLIGIRAKLSSKSSGRWGKSIGDNSKFGLSIPEIMLTIKELKEANLIN 248 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK------ 207 + L FH + L+ + E +++I +GGG+ Sbjct: 249 EMKLLHFHIGSQISDIAVIKDALQEASQIYVELCKLGAPMQYIDVGGGLGIDFDGTKTSS 308 Query: 208 ----DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++++ + + I E G AI+++ + L VL S Sbjct: 309 NTSTNYSLQNYANDVIATIKDSCELNNIKHPTIISESGRAIISHCSVLIFNVLGTSHVSS 368 Query: 257 NLVIVDSSVEAHV 269 L I D + + Sbjct: 369 KLQIFDKKNQQLI 381 >gi|332143282|ref|YP_004429020.1| arginine decarboxylase [Alteromonas macleodii str. 'Deep ecotype'] gi|327553304|gb|AEB00023.1| arginine decarboxylase [Alteromonas macleodii str. 'Deep ecotype'] Length = 639 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 31/313 (9%), Positives = 93/313 (29%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P + L + + ++A + + +K + + + Sbjct: 64 PVVVRFHDILRSQVAGLNKAFRHAIEEAEYQGQYQGVYPVKVNQMREVVEEIVDAGKPYN 123 Query: 53 DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105 G + S E++ E+ YKD E+ + + + ++L Sbjct: 124 YGLEAGSKAELLTVLAMNTNEESLTILNGYKDDEVMRLALLGRKLGRRVVVVVEKFTELL 183 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156 A++L + + + ++ + + + G + I + Sbjct: 184 LLVKTAKELGIEPIIGVRSKMTVKGRGKWESSGGERAKFGLTITEIINAARYLEEQGMAH 243 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + L FH + ++ I + ++++ +GGG+ Sbjct: 244 CLKLLHFHIGSQLTDIRAVKEAVTEGARIYADLHKMGFALDYVDVGGGLGIDYDGSNSTN 303 Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++++ + ++ + E G AI + + + T ++ + Sbjct: 304 ESSRNYSMQEYVADVVYGMKEMCDLEGVPHPHLVSESGRAITAHHSCVITEIVGEIKTNA 363 Query: 257 NLVIVDSSVEAHV 269 + ++ H Sbjct: 364 AQMDTSATEGEHF 376 >gi|325108714|ref|YP_004269782.1| arginine decarboxylase [Planctomyces brasiliensis DSM 5305] gi|324968982|gb|ADY59760.1| arginine decarboxylase [Planctomyces brasiliensis DSM 5305] Length = 653 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 33/279 (11%), Positives = 77/279 (27%), Gaps = 44/279 (15%) Query: 19 DTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEKF 70 + ++A + +K + + + G + S E+++ Sbjct: 99 EAFRAAIEDANYRGTYRGVFPIKVNQQSHVIAEIARVGERFSHGLEAGSKAELLIAMSTL 158 Query: 71 -GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------KFKDKAQKLHKKIGLRIN 123 + YKD E + I F L ++A+ + + + Sbjct: 159 RSKDCLIVCNGYKDEEFIDLGLQARKIGFECFFVLETVKELSIILERAKHWDVEPLIGVR 218 Query: 124 PSVSYS-KFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCE---NKS 171 +S ++ + S G +E + + + L FH + ++ Sbjct: 219 VKLSTKVDGHWSNDSGDRSMFGLTTMQIVEVVDRLKEANMLHCLQLLHFHLGSQIPNIRN 278 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------------DYPVKDFCQR 217 + + + + +LGGG+ + D + Sbjct: 279 IRDGVTEACRYYMDLVNDGAPMGYFNLGGGLAVDYDGSASTHMHSRNYDLNEYCVDIVET 338 Query: 218 LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE 253 L + + I E G V + L +L +S Sbjct: 339 LMNNLDAHEIEHPTIITESGRWTVAPMSVLLFNILSVSH 377 >gi|255543883|ref|XP_002513004.1| arginine decarboxylase, putative [Ricinus communis] gi|223548015|gb|EEF49507.1| arginine decarboxylase, putative [Ricinus communis] Length = 724 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 26/229 (11%), Positives = 64/229 (27%), Gaps = 33/229 (14%) Query: 12 QKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59 L N L++ ++ + + +KC + + + ++ G + S Sbjct: 122 DILKNRLESLQSAFNFAIQSQGYDSHYQGVYPVKCNQDRFVVEDIVRFGSPFRFGLEAGS 181 Query: 60 LYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDK 110 E++L + +KD E ++ I+ +L+ Sbjct: 182 KPELLLAMSCLCKGSPDALLVCNGFKDGEYISLALLARKLALNTVIVLEQEEELDLVIGL 241 Query: 111 AQKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGL 161 ++K+ + + + + + + G + + L Sbjct: 242 SKKMSVRPVIGVRAKLRTRHSGHFGSTSGEKGKFGLTTIQILRVVKKLEEAGMLDCLQLL 301 Query: 162 MFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 FH + S I E ++ I +GGG+ Sbjct: 302 HFHIGSQIPSTSLLADGVGEAAQIYCELVRLGANMQVIDIGGGLGIDYD 350 >gi|283954332|ref|ZP_06371853.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp. jejuni 414] gi|283794131|gb|EFC32879.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp. jejuni 414] Length = 610 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 88/289 (30%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 +++ N RK G K + LK G L + G + S E+ Sbjct: 56 KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 115 Query: 64 MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L +KD I A + + T+ +++L D A K Sbjct: 116 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 175 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 IGLR+ S I A +S+ G + IE+ + + FH Sbjct: 176 KPNIGLRVRL-HSAGVGIWAKSGGIYSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 234 Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + L I E ++ I+LGGG+ + Sbjct: 235 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKNRNYTLREY 294 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E + I++E G + N L VL++ Sbjct: 295 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 343 >gi|3360275|gb|AAC27892.1| ornithine decarboxylase [Haemonchus contortus] Length = 110 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 3/93 (3%) Query: 33 LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEID--AV 89 A+KC + TL G +S E+ + + E Y K A Sbjct: 1 FYAVKCNTDRVLVRTLAALGTGFDCASREEIDIVMDLGVSAERIVYANPCKTRSFITHAK 60 Query: 90 LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 N + F++ +L K + + + + Sbjct: 61 ERNVSMMTFDSAEELAKVAQLHPQAKMILRIAV 93 >gi|169245564|gb|ACA50828.1| LysA [Agrobacterium tumefaciens str. C58] Length = 157 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 37/153 (24%), Gaps = 21/153 (13%) Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +E I LGGG+ + D LK + +EPG + Sbjct: 3 GKPLETIDLGGGLGIPYFAGETSLDLAKVAAAIPDLKALLKAHPLIADAHVIVEPGRFLA 62 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288 V + + +V H + + Sbjct: 63 GPGGLYVVEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQAAHDE 122 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 TA + G C D + GD ++ Sbjct: 123 TATIVGPLCTPLDTLARNATLPKLNAGDLLAIL 155 >gi|255322191|ref|ZP_05363337.1| arginine decarboxylase [Campylobacter showae RM3277] gi|255300564|gb|EET79835.1| arginine decarboxylase [Campylobacter showae RM3277] Length = 611 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 85/289 (29%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEV 63 +++ + + G K + LK G L +Y G + S E+ Sbjct: 57 KQISQIYKSFESAKNEFGYKGSFNAVYPLKVNQYPGFVKNLVRHGQKYGYGLEAGSKAEL 116 Query: 64 MLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L +KD E+ A + + T+ +++L A Sbjct: 117 LLVMAYNNEGAPITVNGFKDKEMINIGFIAAEMGHNITLTIEGLNELEAIIAIAKERFTP 176 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 IGLRI S I A S+ G + IE+ N + FH Sbjct: 177 KPNIGLRIRL-HSSGSGIWAKSGGINSKFGLTATELIEAVNLLKEANLLDRFNMIHFHIG 235 Query: 167 CENKSFLCFS---AMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + NI E ++ I+LGGG+ + Sbjct: 236 SQITEIHPLKKALIEAGNIYAELRKMGAKNLKAINLGGGLAIEYSQFKENSSRNYTLSEY 295 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + + I++E G + + L VL++ Sbjct: 296 ANDVVYLLKTMATQRNEVEPDIFIESGRFVSASHAVLVAPVLELFSQDY 344 >gi|169245556|gb|ACA50824.1| LysA [Agrobacterium tumefaciens] gi|169245560|gb|ACA50826.1| LysA [Agrobacterium tumefaciens] gi|169245580|gb|ACA50836.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 36/153 (23%), Gaps = 21/153 (13%) Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY-----------LEPGEAIV 238 +E I LGGG+ + ++ +EPG + Sbjct: 3 GRPLETIDLGGGLGIPYFAGETPLDLAAVSAAISDLKALMHAHPLIANAHIIVEPGRFLA 62 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288 V + + +V H + + Sbjct: 63 GPGGIYVAEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADYEE 122 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 TA + G C D +K GD ++ Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|72383214|ref|YP_292569.1| arginine decarboxylase [Prochlorococcus marinus str. NATL2A] gi|72003064|gb|AAZ58866.1| arginine decarboxylase [Prochlorococcus marinus str. NATL2A] Length = 647 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 33/294 (11%), Positives = 85/294 (28%), Gaps = 48/294 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + L + L + A + + +KC + + L +++ Sbjct: 68 PLLIRFDDILEDCLKNLHKAFEKAINDYQYQGKYQGVFPIKCNQQRHVVEELITCGSKWN 127 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105 G + S E+++ + YKD ++ + + Sbjct: 128 FGLEAGSKPELLIALSILEDPKALLICNGYKDQRYIETAILARQLGRQPIVVIEQANDVE 187 Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIES--------EIK 156 + L + I S S + S+ G + +++ + Sbjct: 188 LIIKSSNLLGASPLIGIRAKLSSQSSGRWSSSIGDKSKFGLSIPEILKAIKRLKEANLLN 247 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------ 207 + L FH + L+ + + + ++ +GGG+ Sbjct: 248 ELKLLHFHLGSQINDIGVLKDALQEAGQIYAELINLGAPMGYLDVGGGLGIDYDGSQTAS 307 Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD 250 +Y ++++ + ++ + E G AI ++ + L +L Sbjct: 308 IASTNYSLQNYANDVVATIKECCESKKIPLPTLITESGRAIASHFSILIFNILG 361 >gi|56460321|ref|YP_155602.1| arginine decarboxylase [Idiomarina loihiensis L2TR] gi|56179331|gb|AAV82053.1| Arginine decarboxylase [Idiomarina loihiensis L2TR] Length = 636 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 34/333 (10%), Positives = 90/333 (27%), Gaps = 49/333 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIR----KNAGVKLLL----ALKCFAAWGMFDTLNQYMD--- 53 P + L + ++ + A + +K + + + + Sbjct: 61 PAVIRFHDILRSQVEIINETFGKQIEEANYQGQYCGVFPIKVNQMREVVEEIMDAGEPYN 120 Query: 54 -GTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105 G + S E+M E YKD + + I+ S+L Sbjct: 121 YGLEAGSKPELMAVMAYNDNPEALTILNGYKDKDYLTLALLGRQLKRKMIIVIEKFSELE 180 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIK 156 A+++ K + + + + + G + + + Sbjct: 181 MLIPLAKQMGVKPMIGLRSKMMVKSSGKWAGSSGDRAKFGLSIAEILNVIERLREEDMLH 240 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY---- 209 L FH + + + + +E++ +GGG+ Sbjct: 241 CAKLLHFHIGSQLSDIRKIKEAVNEGARLYAKLVLEGMPLEYLDIGGGLGIDYDGTSTTN 300 Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V +++ + + + E G A+ + + + T ++ + Sbjct: 301 DSSRNYSTEEYVADVVWGVKQICDLEKVPHPNLVSESGRAMTAHHSCVVTNIVGEMKPAG 360 Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 + +S + H+ +E + P Sbjct: 361 TQYDISASSDEHIL-VKNMRELHSSGDQFHPQE 392 >gi|291297208|ref|YP_003508606.1| arginine decarboxylase [Meiothermus ruber DSM 1279] gi|290472167|gb|ADD29586.1| arginine decarboxylase [Meiothermus ruber DSM 1279] Length = 647 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 32/284 (11%), Positives = 77/284 (27%), Gaps = 43/284 (15%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH 67 + + Y G L +K + +T+ + G + S E+ L Sbjct: 98 EAFRRAIKKYHYNASYQG---LFPVKVNQRRMVVETVARAGKPFAYGLEAGSKAELALIL 154 Query: 68 E-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126 E+ +KD + + + N V L KF + + + + + P + Sbjct: 155 AQDLHPESIIACNGFKDDDFIRLALMGKKLGRNVVVTLEKFAELGRVIRIAKEIGVEPQI 214 Query: 127 SYS-------KFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCE--- 168 + ++ G + I++ + L H + Sbjct: 215 GIRYKLKTKGSGAWEESGGEAAKFGFTTPEIIKAVDMLAEAGLLGTIAMLHSHIGSQVTD 274 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-----------------DYPV 211 + + + + +++LGGG+ + Sbjct: 275 IRRIKQAVREIAQTYVQLRKLGAPVRYLNLGGGLAVDYDGSKTAFYASANYTLEEYAEDL 334 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + + + + + E G A+ + L V+D Sbjct: 335 VYVTKEICDGHGEPHPILVTESGRAVTAYHSVLVLEVIDTIRPP 378 >gi|307608756|emb|CBW98138.1| hypothetical protein LPW_00051 [Legionella pneumophila 130b] Length = 630 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 94/330 (28%), Gaps = 47/330 (14%) Query: 12 QKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMD---GTTSSSLYEVM 64 ++ R++ +L+ +K + L + D G + S E+M Sbjct: 69 DRVHRIYQAFTQAREDTYYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLEAGSKPELM 128 Query: 65 LGHEKFGGETHAY-NVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 G YKD + + I+ S+L+ ++ +L K Sbjct: 129 AVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQMGHKVFIVIEKKSELDIILKESARLQIK 188 Query: 118 IGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCE 168 L + VS S + S+ G K + + + + H + Sbjct: 189 PTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQLMHCHLGSQ 248 Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDK----------DYPVKDFC 215 + ++ + + I I +GGG+ + +Y + ++ Sbjct: 249 IANIHDIRHCMQEVARYYIELRQLNAPIGTIDVGGGLSVDYEGTRSNKGCSMNYSLVEYA 308 Query: 216 QRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNL--VIVDSSVE 266 + + I E G A+ + L + + D+ K + Sbjct: 309 THIMLALKHLCQEAEISEPDIISESGRALTAHHAVLISNITDVEIINKAPVLPEISEDDS 368 Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 + D +Y I ++ S Sbjct: 369 HVIRD--IYDTYQAITDSSPTEIYNYAAHS 396 >gi|54292970|ref|YP_125385.1| arginine decarboxylase [Legionella pneumophila str. Lens] gi|53752802|emb|CAH14236.1| hypothetical protein lpl0006 [Legionella pneumophila str. Lens] Length = 630 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 42/330 (12%), Positives = 94/330 (28%), Gaps = 47/330 (14%) Query: 12 QKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMD---GTTSSSLYEVM 64 ++ R++ +L+ +K + L + D G + S E+M Sbjct: 69 DRVHRIYQAFTQAREDTYYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLEAGSKPELM 128 Query: 65 LGHEKFGGETHAY-NVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 G YKD + + I+ S+L+ ++ +L K Sbjct: 129 AVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQMGHKVFIVIEKKSELDIILKESARLQIK 188 Query: 118 IGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCE 168 L + VS S + S+ G K + + + + H + Sbjct: 189 PTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQLMHCHLGSQ 248 Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDK----------DYPVKDFC 215 + ++ + + I I +GGG+ + +Y + ++ Sbjct: 249 IANIHDIRHCMQEVARYYIELRQLNAPIGTIDVGGGLSVDYEGTRSNKGCSMNYSLVEYA 308 Query: 216 QRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNL--VIVDSSVE 266 + + + E G A+ + L + + D+ K + Sbjct: 309 THIMLALKHLCQEAEISEPDLISESGRALTAHHAVLISNITDVEIINKAPVLPEISEDDS 368 Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 + D +Y I ++ S Sbjct: 369 HVIRD--IYDTYQAITDSSPTEIYNYAAHS 396 >gi|296242242|ref|YP_003649729.1| Orn/DAP/Arg decarboxylase 2 [Thermosphaera aggregans DSM 11486] gi|296094826|gb|ADG90777.1| Orn/DAP/Arg decarboxylase 2 [Thermosphaera aggregans DSM 11486] Length = 588 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 35/284 (12%), Positives = 72/284 (25%), Gaps = 30/284 (10%) Query: 16 NNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEKF 70 T + G + + +K + D + +Y G + S+ E+ L H+ Sbjct: 75 ETYKTLSQVHGYTGKFQPVFPMKVNPIPIVIDAIWKYGEEFNWGFNTGSIGEIKLLHKYL 134 Query: 71 --GGETHAYNVAYKDC-----EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 G Y+ D + + L A Sbjct: 135 NKGSRLLIYDGVVSDNVLKLLMDFEKAGWNVIVDVESEHDLQVLSKYANIHVGLRVKPFY 194 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSAMLKN 181 + + K E + N + H + +A+ + Sbjct: 195 KPGGKWSHSAGLEGKFGLTINTLLKLIKEYKWLNERAILIHVHGGSQIYELKHIAAIFEE 254 Query: 182 IEKEFGH----FITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFSEKYSV 227 + I I GGG+ + +Y + D+ L + + Sbjct: 255 AKTLLNDLRNIGFENISIIDTGGGMAYPYHDSRKGTPESPNYTIVDYINLLIKKFKDAQP 314 Query: 228 QI--YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269 E G IV + + V+D+ ++ A + Sbjct: 315 HPTLVFEGGRYIVASHRIVVAKVVDVRPYSTEYKPFENGNGARM 358 >gi|326336144|ref|ZP_08202316.1| arginine decarboxylase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691653|gb|EGD33620.1| arginine decarboxylase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 463 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 49/399 (12%), Positives = 104/399 (26%), Gaps = 59/399 (14%) Query: 13 KLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 K+ N+ A + A K + + +SS +++ Sbjct: 52 KISENIQRAKRWFEKAIKKHKYKGDYNYCYCTKSSHFKHVMVEALKNDIHMETSSAFDID 111 Query: 65 ----LGHEKF-GGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQK 113 L E F E + +K I + D+ K Sbjct: 112 IINNLIKEGFLNKENYILCNGFKRDAYIDGIADLINRGYDRCIPIIDNYEEINLFDQKIK 171 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENK- 170 IG+RI + K+ +++ ++ L F N K Sbjct: 172 GKYNIGIRIASEEDPRSEFYTSRLGIGYKNIVPFYNKELKDNKKVSLKMLHFFINTGIKD 231 Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRL 218 + + + +++ +++GGG + + + Sbjct: 232 NAYYWNELLKCLKVYIQLKKVAPELDSLNIGGGFPIKTSLAFEYDYAYMVDEIIRQIKIA 291 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276 + + I+ E G V ++ + +++SS +PD Sbjct: 292 CDQEKVPVPNIFTEFGSFTVGEAGGAIYEIMYQKQQNDREKWNMINSSFITTLPDTWAIN 351 Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321 + N + G +C D +++ KP+ IG F Sbjct: 352 KRFVLLPINRWNDEYERVFLGGLTCDGDDYYNSEQNMNAIYLPKYNRNKPLYIG----FF 407 Query: 322 DVAGY----NINRKNWFNGINMPTIAVKNVDGTIKAIRE 356 + Y I P I + + + + I Sbjct: 408 NTGAYQDSIGGVGGLQHCLIPQPKIVLIDKNKNGEIISR 446 >gi|223040993|ref|ZP_03611253.1| arginine decarboxylase [Campylobacter rectus RM3267] gi|222877749|gb|EEF12870.1| arginine decarboxylase [Campylobacter rectus RM3267] Length = 611 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 85/289 (29%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEV 63 +++ + + G K + LK G L +Y G + S E+ Sbjct: 57 KQISQIYKSFESAKNEFGYKGSFNAVYPLKVNQYPGFVKNLVRHGQKYGYGLEAGSKAEL 116 Query: 64 MLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L +KD E+ A + + T+ +++L A Sbjct: 117 LLVMAYNNEGAPITVNGFKDKEMINIGFIAAEMGHNITLTIEGLNELEAIIAIAKERFAP 176 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 IGLRI S S A S+ G + IE+ N + FH Sbjct: 177 KPNIGLRIRLHSSGSGV-WAKSGGINSKFGLTATELIEAVNLLKEANLLDRFNMIHFHIG 235 Query: 167 CENKSFLCFS---AMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + NI E ++ I+LGGG+ + Sbjct: 236 SQITEIHPLKKALIEAGNIYAELRKMGAKNLKAINLGGGLAIEYSQFKENSSRNYTLSEY 295 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + + I++E G + + L VL++ Sbjct: 296 ANDVVYLLKTMATQRNEVEPDIFIESGRFVSASHAVLVAPVLELFSQDY 344 >gi|224080476|ref|XP_002306141.1| predicted protein [Populus trichocarpa] gi|222849105|gb|EEE86652.1| predicted protein [Populus trichocarpa] Length = 730 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 34/331 (10%), Positives = 91/331 (27%), Gaps = 42/331 (12%) Query: 12 QKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59 L N L++ A + + +KC + + + ++ G + S Sbjct: 128 DVLKNRLESLQSAFDFAIQSQVYEAHYQGVYPVKCNQDRFVVEDIVRFGSPFRFGLEAGS 187 Query: 60 LYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDK 110 E++L E +KD E ++ I+ +++ + Sbjct: 188 KPELLLAMSCLCKGNPEALLICNGFKDGEYISLALIARKLALNTVIVLEQEEEIDLVIEL 247 Query: 111 AQKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGL 161 ++K+ + + + + + + G + L Sbjct: 248 SKKMSVRPVVGVRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVKKLEQAGMLDCFQLL 307 Query: 162 MFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218 FH + S + I E +++ I +GGG+ + + Sbjct: 308 HFHIGSQIPSTSLLADGVSEAAQIYCELVRLGARMQVIDIGGGLGIDYDGSKSGNSDLSV 367 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278 E+Y++ + V + + V+ + + + + + Sbjct: 368 AYGLEEYALAVVQAVK--FVCDRKNVKHPVICSESGRAIVSHHSI----LIFEAISSSST 421 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309 + + + G L D ++ Sbjct: 422 SAASMTSYEMQYYLGG---LTEDARADYRNL 449 >gi|52840262|ref|YP_094061.1| arginine decarboxylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627373|gb|AAU26114.1| biosynthetic arginine decarboxylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 630 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 42/330 (12%), Positives = 94/330 (28%), Gaps = 47/330 (14%) Query: 12 QKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMD---GTTSSSLYEVM 64 ++ R++ +L+ +K + L + D G + S E+M Sbjct: 69 DRVHRIYQAFTQAREDTCYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLEAGSKPELM 128 Query: 65 LGHEKFGGETHAY-NVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 G YKD + + I+ S+L+ ++ +L K Sbjct: 129 AVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQMGHKVFIVIEKKSELDIILKESARLQIK 188 Query: 118 IGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCE 168 L + VS S + S+ G K + + + + H + Sbjct: 189 PTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQLMHCHLGSQ 248 Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDK----------DYPVKDFC 215 + ++ + + I I +GGG+ + +Y + ++ Sbjct: 249 IANIHDIRHCMQEVARYYIELRQLNAPIGTIDVGGGLSVDYEGTRSNKGCSMNYSLVEYA 308 Query: 216 QRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNL--VIVDSSVE 266 + + + E G A+ + L + + D+ K + Sbjct: 309 THIMLALKHLCQEAEISEPDLISESGRALTAHHAVLISNITDVEIINKAPVLPEISEDDS 368 Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 + D +Y I ++ S Sbjct: 369 HVIRD--IYDTYQAITDSSPTEIYNYAAHS 396 >gi|15858871|gb|AAL08053.1| ornithine decarboxylase-like protein variant 6 [Homo sapiens] gi|56202450|emb|CAI19353.1| arginine decarboxylase [Homo sapiens] gi|119627881|gb|EAX07476.1| arginine decarboxylase, isoform CRA_h [Homo sapiens] Length = 204 Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58 +++ D ++ +++ V+ A+KC ++ G+ L Q G + + Sbjct: 41 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCA 91 >gi|148358145|ref|YP_001249352.1| biosynthetic arginine decarboxylase [Legionella pneumophila str. Corby] gi|296105503|ref|YP_003617203.1| arginine decarboxylase [Legionella pneumophila 2300/99 Alcoy] gi|148279918|gb|ABQ54006.1| biosynthetic arginine decarboxylase [Legionella pneumophila str. Corby] gi|295647404|gb|ADG23251.1| arginine decarboxylase [Legionella pneumophila 2300/99 Alcoy] Length = 630 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 42/330 (12%), Positives = 94/330 (28%), Gaps = 47/330 (14%) Query: 12 QKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMD---GTTSSSLYEVM 64 ++ R++ +L+ +K + L + D G + S E+M Sbjct: 69 DRVHRIYQAFTQAREDTYYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLEAGSKPELM 128 Query: 65 LGHEKFGGETHAY-NVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 G YKD + + I+ S+L+ ++ +L K Sbjct: 129 AVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQMGHKVFIVIEKKSELDIILKESARLQIK 188 Query: 118 IGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCE 168 L + VS S + S+ G K + + + + H + Sbjct: 189 PTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQLMHCHLGSQ 248 Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDK----------DYPVKDFC 215 + ++ + + I I +GGG+ + +Y + ++ Sbjct: 249 IANIHDIRHCMQEVARYYIELRQLNAPIGTIDVGGGLSVDYEGTRSNKGCSMNYSLVEYA 308 Query: 216 QRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNL--VIVDSSVE 266 + + + E G A+ + L + + D+ K + Sbjct: 309 THIMLALKHLCQEAEIPEPDLISESGRALTAHHAVLISNITDVEIINKAPVLPEISEDDS 368 Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296 + D +Y I ++ S Sbjct: 369 HVIRD--IYDTYQAITDSSPTEIYNYAAHS 396 >gi|315226159|ref|ZP_07867947.1| diaminopimelate decarboxylase [Parascardovia denticolens DSM 10105] gi|315120291|gb|EFT83423.1| diaminopimelate decarboxylase [Parascardovia denticolens DSM 10105] Length = 129 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 1/90 (1%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 +TPY + D + + + + G KL ALK + L + G +S Sbjct: 27 ETPYIIFDFTGIRHAVQEYQHSICLLGNAKLNFALKACYEPDILRLLREEKLGVDVASSN 86 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLS 91 E L + E A ++ + + Sbjct: 87 EFKLAQKIGFDEISATGPSFTHPDQVDIWH 116 >gi|255536389|ref|YP_003096760.1| putative arginine decarboxylase [Flavobacteriaceae bacterium 3519-10] gi|255342585|gb|ACU08698.1| putative arginine decarboxylase [Flavobacteriaceae bacterium 3519-10] Length = 463 Score = 55.9 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 58/420 (13%), Positives = 119/420 (28%), Gaps = 69/420 (16%) Query: 3 KTPY-YLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD 53 TP + K+ N+ A K A G + K + + + Sbjct: 42 GTPLKFNY-LPKISMNIQRAKAWFKEAIEKNDYKKGYRYCYCTKSSQFAFVLEEALKNDI 100 Query: 54 GTTSSSLYEVMLGHE-----KFGGETHAYNVAYKDCEIDAVL-------SNCDTIIFNTV 101 +SS Y++ + K+ + +K + A + + + Sbjct: 101 SIETSSAYDMDIVKALYDKGKYDKDVEVICNGFKTDDYLAKISDLINSGFQNIVPVLDNY 160 Query: 102 SQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VN 159 +L+K + + IG+RI + + +E N + Sbjct: 161 RELDKLTE-SIDTTFNIGIRIASEEEPKFEFYTSRLGIGYKDIIPYYSQKIAEHPNARLK 219 Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFT---DKDYPVKD 213 L F N K + L + + +++ +++GGG + DY + Sbjct: 220 MLHFFINTGIKDTAYYWNELYKCLRVYARLKKIAPEVDSLNIGGGFPIKTSLNFDYDYQY 279 Query: 214 FCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSS 264 + +K+ IY E G V + ++ + + ++DSS Sbjct: 280 MVNEIVSQIKKFCEEEGVEEPNIYTEFGSFTVGESGGNLYKIISQKRQNDREKWNMIDSS 339 Query: 265 VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIF-----GEFHFEK----- 310 +PD + + G +C + D + + Sbjct: 340 FMTTLPDTWAISRHFIMLPLNRWDDTYERVFLGGLTCDSDDYYNSEQHTNAIYLPVFSDT 399 Query: 311 -PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAIREFSYNDYYN 364 P+ IG F Y + G + P + N D F+Y + Sbjct: 400 KPLYIG----FFHTGAYQETIG-GYGGVHHCLMPQPKHILINKDEEGN----FTYEVFRE 450 >gi|222823751|ref|YP_002575325.1| arginine decarboxylase [Campylobacter lari RM2100] gi|222538973|gb|ACM64074.1| arginine decarboxylase [Campylobacter lari RM2100] Length = 609 Score = 55.9 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 85/289 (29%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEV 63 +++ D +K K + LK G L +Y G + S E+ Sbjct: 57 KQIEQIYDKFAKAKKEFNYKGSFNAVYPLKVNQYPGFVKNLVNLGREYNYGLEAGSKAEL 116 Query: 64 MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L +KD I + + T+ +++L + A K Sbjct: 117 LLAMAYNNEGAPITVNGFKDKELINMGFIACEMGHNITLTMEGLNELEAMIEIAKNRFKP 176 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 IGLR+ S I A S+ G + IE+ + FH Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKANKLLDQFTMIHFHLG 235 Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + L I E ++ I+LGGG+ + Sbjct: 236 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNETSRNYTLSEY 295 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E + I++E G + N L VL++ Sbjct: 296 ANDVVFILKSIAEQKKDLEPDIFIESGRFVAANHAVLVAPVLELFSQEY 344 >gi|183178878|gb|ACC43927.1| arginine decarboxylase [Malus hupehensis] Length = 728 Score = 55.9 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 29/236 (12%), Positives = 65/236 (27%), Gaps = 33/236 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L + L++ + + + +KC + + + ++ Sbjct: 112 PLIVRLPDVLKDRLESLQGAFDLAIRSHDYGSHYQGVYPVKCNQDRFVVEDIVKFGSPFR 171 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E++L + +KD E ++ + NTV L + ++ Sbjct: 172 FGLEAGSKPELLLAMSCLCKGNPDALLICNGFKDLEYISLALFARKLALNTVIVLEQEEE 231 Query: 110 KAQKLHKKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIESEI------- 155 + L + P + + + G + Sbjct: 232 LDLVVDFSQKLGVRPVIGVRAKLKTKHSGHYGSTSGEKGKFGLTTTQILRVVKKLDKLGM 291 Query: 156 -KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 L FH + S + I E ++ I +GGG+ Sbjct: 292 LDCFQLLHFHIGSQIPSTALLADGVSEASQIYCELVRLGAHMKVIDIGGGLGIDYD 347 >gi|302519673|ref|ZP_07272015.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB78] gi|302428568|gb|EFL00384.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB78] Length = 220 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 40/137 (29%), Gaps = 4/137 (2%) Query: 210 PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--- 266 + + + G +++ L V + + V + Sbjct: 44 DTRRCSRFSVPGLFDGRYALVTGFGRSLLAGHGFLLARVEYVRAMGGRRLAVTHAGTRMA 103 Query: 267 AHVPDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 H L A P GP A + G + G++ ++ GD ++ D Sbjct: 104 GHACGRRLAAYDAQGRPKEGPALAQDLAGPAQFDGELLASGAELPELEQGDWLAVLDTGA 163 Query: 326 YNINRKNWFNGINMPTI 342 Y R ++ + P I Sbjct: 164 YGFARHQAYDSLTRPGI 180 >gi|254492362|ref|ZP_05105534.1| arginine decarboxylase [Methylophaga thiooxidans DMS010] gi|224462254|gb|EEF78531.1| arginine decarboxylase [Methylophaga thiooxydans DMS010] Length = 648 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 29/251 (11%), Positives = 70/251 (27%), Gaps = 32/251 (12%) Query: 11 KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58 + L + A + + +K + + + Y G + Sbjct: 82 ENLLDQRITQLNEAFAKAINEAGYNNHYRGVFPIKVNQQCHVIEEIADYGSRYHHGLEAG 141 Query: 59 SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 S E+++ + E+ YKD E + + N L + L + Sbjct: 142 SKAELIIALTQLKDPESLIICNGYKDEEFIELGLYARQMGINCFFVLETAMELDIILERS 201 Query: 118 IGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLM 162 L I+P + S + + + S G + + + L Sbjct: 202 RALGIDPLIGVRIRLASMVEGHWNEDSGDRSIFGLSTNALLGVIEKLKQADMLHCLQLLH 261 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219 H + + + + + + + +I +GGG+ + + + Sbjct: 262 SHLGSQIPNIRNIRSGVMEACRFYAGLIEEGAPMGYIDIGGGLAVDYEG-ARSNSTHSMN 320 Query: 220 EFSEKYSVQIY 230 ++Y I Sbjct: 321 YGLDEYCYSIV 331 >gi|23012521|ref|ZP_00052585.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 121 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 4/54 (7%) Query: 289 TAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338 +V G +C + D+ E + + IGD++ E Y FNG Sbjct: 61 PCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGTGAYTTTYAAVAFNGFP 114 >gi|57506109|ref|ZP_00372031.1| arginine decarboxylase [Campylobacter upsaliensis RM3195] gi|57015593|gb|EAL52385.1| arginine decarboxylase [Campylobacter upsaliensis RM3195] Length = 610 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 88/289 (30%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 +++ N + RK K + LK G L + G + S E+ Sbjct: 57 KQIENIYGSFTKARKEFDYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 116 Query: 64 MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L + +KD I A + + T+ +++L D A K Sbjct: 117 LLAMAYNNENSPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 176 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNN 166 IGLR+ S I A S+ G + IE+ I+ + FH Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGIHSKFGLTSTELIEAVNLLKENKLIEQFTMIHFHLG 235 Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + L I E ++ I+LGGG+ + Sbjct: 236 SQINEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKDEKSRNYTLREY 295 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E I++E G + + L VL++ Sbjct: 296 ANDVVFILKNIAEQKSDIEPDIFIESGRFVAASHAILIAPVLELFSQEY 344 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 43/133 (32%), Gaps = 18/133 (13%) Query: 249 LDISENIKNLVIVDSSVEAHVPDYL----LYQESATIYPNTGP-YTAMVCGRSCLAGDIF 303 + I ++ +V+ S+ +PD+ + + P +A + +C + D Sbjct: 429 IAIQNEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEKPTRSASIWDITCDS-DGE 487 Query: 304 GEFHFEKPVKIGD--------RISFEDVAGYNINRKNWFNGINMPTI--AVKNVDGTIK- 352 + + P+ + D + F + Y N PT + +G + Sbjct: 488 ISYSKDNPLLLHDVDVEKENYFLGFFLMGAYQEVLGMKHNLFTHPTEASVYIDENGYVLK 547 Query: 353 -AIREFSYNDYYN 364 I S D Sbjct: 548 DIIEAQSILDILE 560 >gi|315638101|ref|ZP_07893286.1| arginine 2-monooxygenase [Campylobacter upsaliensis JV21] gi|315481949|gb|EFU72568.1| arginine 2-monooxygenase [Campylobacter upsaliensis JV21] Length = 610 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 88/289 (30%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 +++ N + RK K + LK G L + G + S E+ Sbjct: 57 KQIENIYGSFTKARKEFDYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 116 Query: 64 MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L + +KD I A + + T+ +++L D A K Sbjct: 117 LLAMAYNNENSPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 176 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNN 166 IGLR+ S I A S+ G + IE+ I+ + FH Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGIHSKFGLTSTELIEAVNLLKENKLIEQFTMIHFHLG 235 Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + L I E ++ I+LGGG+ + Sbjct: 236 SQINEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKDEKSRNYTLREY 295 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E I++E G + + L VL++ Sbjct: 296 ANDVVFILKNIAEQKSDIEPDIFIESGRFVAASHAILIAPVLELFSQEY 344 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 43/133 (32%), Gaps = 18/133 (13%) Query: 249 LDISENIKNLVIVDSSVEAHVPDYL----LYQESATIYPNTGP-YTAMVCGRSCLAGDIF 303 + I ++ +V+ S+ +PD+ + + P +A + +C + D Sbjct: 429 IAIQNEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEKPTRSASIWDITCDS-DGE 487 Query: 304 GEFHFEKPVKIGD--------RISFEDVAGYNINRKNWFNGINMPTI--AVKNVDGTIK- 352 + + P+ + D + F + Y N PT + +G + Sbjct: 488 ISYSKDNPLLLHDVDVEKENYFLGFFLMGAYQEVLGMKHNLFTHPTEASVYIDENGYVLK 547 Query: 353 -AIREFSYNDYYN 364 I S D Sbjct: 548 DIIEAQSILDILE 560 >gi|282892086|ref|ZP_06300561.1| hypothetical protein pah_c207o009 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497981|gb|EFB40325.1| hypothetical protein pah_c207o009 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 623 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 92/307 (29%), Gaps = 48/307 (15%) Query: 14 LLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLY 61 + + + + +++ +K + +T+ G S Sbjct: 62 VRDRIQRLNAAFQAAIREFNYRNTHQMVFPIKVNPQRHVVETVQHAGQEFKMGLEVGSKP 121 Query: 62 EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKL 114 E++ +T YKD E ++ II +L D A+KL Sbjct: 122 ELIAVFAIDTHPDTILLCNGYKDIEYISLALIASKLGRRTLIIIEQAYELQLVLDAAKKL 181 Query: 115 HKKIGLRINPSVS-YSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHN 165 + + +S S+ G + I + + L FH Sbjct: 182 GVEAEIGFRMKLSNTGSGRWKSSGGEHSKFGLFSHEIIACIETLQHHEKTHWLKLLHFHL 241 Query: 166 NCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIH----------FTDKDYPVK 212 + + LK + E + + + +GGG+ + +Y ++ Sbjct: 242 GSQITTIESVKKTLKEASRMYTELATMLPFLSFFDVGGGLAVDYDGSKSDSDSSMNYTME 301 Query: 213 DFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265 ++ + + + I E G AIV + + L T V+D++ ++ Sbjct: 302 EYARDVVFAIGEACLSADVADPIIITEAGRAIVAHHSVLVTEVIDVTTTPNIPEKWNAHS 361 Query: 266 EAHVPDY 272 + + Sbjct: 362 KHEILTT 368 >gi|147782234|emb|CAN65288.1| hypothetical protein VITISV_008959 [Vitis vinifera] Length = 613 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 66/236 (27%), Gaps = 33/236 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ + + + +KC + + + ++ Sbjct: 21 PLIVRLPDVLQNRLESLQSAFDFAIQSQGYESHYQGVFPVKCNQDRFIVEDVVKFGSAFR 80 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L E +KD + A+ I+ + Sbjct: 81 FGLEAGSKPELLLAMSCLCKGNPEALLVCNGFKDADYIALALVARKLALNTVIVLEQEEE 140 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEI------- 155 L+ + +QKL + + + + + G + Sbjct: 141 LDLVINLSQKLSVHPVIGVRAKLRTKHAGHFGSTSGEKGKFGLTTXQILRVVRKLEQAGM 200 Query: 156 -KNVNGLMFHNNCENKSFL---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 ++ L FH + S + I E + I +GGG+ Sbjct: 201 LDSLQLLHFHIGSQIPSTDLLADGVSEAAQIYCELVRLGAHMRVIDIGGGLGIDYD 256 >gi|298715473|emb|CBJ34056.1| conserved unknown protein [Ectocarpus siliculosus] Length = 139 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 17/47 (36%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL 48 + TP Y+ D L N + L G+ + A+K + Sbjct: 91 VGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLF 137 >gi|292493374|ref|YP_003528813.1| arginine decarboxylase [Nitrosococcus halophilus Nc4] gi|291581969|gb|ADE16426.1| arginine decarboxylase [Nitrosococcus halophilus Nc4] Length = 629 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 33/297 (11%), Positives = 68/297 (22%), Gaps = 46/297 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLL--------ALKCFAAWGMFDTL---NQYMD 53 P + L + + A +K + + + Sbjct: 62 PVLVRFSGILHHRAKSLQTAFTEAMAATHYQGSFNAVYPIKVNQQRQVVKEILAADPEHM 121 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKF 107 G + S E++ YKD E + ++ S+L Sbjct: 122 GLEAGSKPELLAVMALSRPGAPVICNGYKDREYIRLALMGRQLGLRIYLVVEKPSELEHI 181 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNV 158 +A+ L K L + ++ + G + I + Sbjct: 182 IREARALKVKPLLGVRVRLASIGKGKWQNTGGEKGKFGLSSAQVLTMLQRLRQMEMIDCL 241 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + +GGG+ Sbjct: 242 TLLHFHMGSQLPNIADIQRGIREAGRYYATLRELGVPLRSVDVGGGLGVDYDGTHTRGFC 301 Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 L E + + +I E G A+ + L + ++D Sbjct: 302 STNYTLSEYAHKIVHGLWEICDAHQLPHPEIITEAGRAMTAHHAVLISNIIDTQPAP 358 >gi|169245570|gb|ACA50831.1| LysA [Agrobacterium tumefaciens] gi|169245572|gb|ACA50832.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 39/153 (25%), Gaps = 21/153 (13%) Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +E I LGGG+ + D LK + +EPG + Sbjct: 3 GKPLETIDLGGGLGIPYFAGETPLDLAKVAAAIPDLKALLKAHPLIADAHVIVEPGRFLA 62 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288 V + + +V + H + + Sbjct: 63 GPGGLYVAEVNSVKISRGTTFLVTNGGMHHHLAASGNLGQIVKRNYPIVAPAMMQAAYEE 122 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 TA + G C D +K GD ++ Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|320352212|ref|YP_004193551.1| arginine decarboxylase [Desulfobulbus propionicus DSM 2032] gi|320120714|gb|ADW16260.1| arginine decarboxylase [Desulfobulbus propionicus DSM 2032] Length = 638 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 89/305 (29%), Gaps = 46/305 (15%) Query: 19 DTALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEKF 70 +T + G K +K + + + Q+ G + S E++ Sbjct: 84 ETFRSAMEELGYKGTFMGAYPIKVNQQQQVVEKIAQFGSRYHHGLEAGSKAELIAAMGMM 143 Query: 71 -GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------FKDKAQKLHKKIGLRIN 123 + YKD E + I F + + ++++ L+ K L I Sbjct: 144 RDKKAALICNGYKDEEFIDLGLYATKIGFTCILVVEMPDELPLIIERSKALNAKPILGIR 203 Query: 124 PSVSYS-KFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFLC 174 +S ++ S G I++ + + +H + + Sbjct: 204 IKLSAQAGGHWSESGGERSIFGLNTSQIIQAVDLLASAGMLDCLKLVHYHLGSQISNIRE 263 Query: 175 FSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK--------------DYPVKDFCQR 217 + + + Q++++ LGGG+ D + Sbjct: 264 IRTAVNEACRVYAGLVKEGAQVQYLDLGGGLAVDYDGSQSNFLSSRNYTLKEYCTDIIEA 323 Query: 218 LKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274 + E+ I E G A+V + L +LD+++ + P L Sbjct: 324 VMTSLEEDQIPHPVIVTESGRALVAYYSILLFNILDVTQFHAEPLPAKLPEGC--PPQLE 381 Query: 275 YQESA 279 Y A Sbjct: 382 YMHQA 386 >gi|313207184|ref|YP_004046361.1| orn/dap/arg decarboxylase 2 [Riemerella anatipestifer DSM 15868] gi|312446500|gb|ADQ82855.1| Orn/DAP/Arg decarboxylase 2 [Riemerella anatipestifer DSM 15868] gi|315022415|gb|EFT35442.1| putative arginine decarboxylase [Riemerella anatipestifer RA-YM] gi|325335377|gb|ADZ11651.1| arginine decarboxylase [Riemerella anatipestifer RA-GD] Length = 463 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 58/424 (13%), Positives = 116/424 (27%), Gaps = 68/424 (16%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYMDG 54 TP + K+ N+ A A K K + + + Sbjct: 42 GTPLKISYLPKISQNIQRAKKWFSEAIAKNEYRNTYRYCYCTKSSHFSFVLEEALKNDIS 101 Query: 55 TTSSSLYEVMLGHEKFGG-------ETHAYNVAYKDCEIDAVLSNCDTI-----IFNTVS 102 +SS +++ + + + E D + I + Sbjct: 102 METSSAFDMDIVRKLYDKGKVTKDIEVICNGFKTDDYLEKISDLINEGFENITPILDNYR 161 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNG 160 +L+K + + IG+RI + + +E N + Sbjct: 162 ELDKLTE-SIDTTFNIGIRIASEEEPKFEFYTSRLGIGYKDIIPYYSQKIAEHPNARLKM 220 Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFT---DKDYPVKDF 214 L F N K + L + + +++ +++GGG + DY + Sbjct: 221 LHFFINTGIKDTAYYWNELFKCLRVYARLKKIAPEVDSLNIGGGFPIKTSLNFDYDYEYM 280 Query: 215 CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSV 265 + +K+ IY E G V + ++ + + ++DSS Sbjct: 281 VNEIVSQIKKFCEEEGVEEPNIYTEFGSFTVGESGANLYQIISQKRQNDREKWDMIDSSF 340 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIF-----GEFHFEK------ 310 +PD + G +C + D + + Sbjct: 341 MTTLPDTWAISRHFIMLPLNRWEDSYERVFLGGLTCDSDDYYNSEQHTNAIYLPVFSDTK 400 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGT----IKAIRE-FSYN 360 P+ IG F + Y + + + G I P + D + RE S Sbjct: 401 PLYIG----FFNTGAYQESI-SGYGGAHHCLIPQPRHILITKDEEGNFVYELFREKQSPE 455 Query: 361 DYYN 364 D Sbjct: 456 DVLK 459 >gi|307546595|ref|YP_003899074.1| arginine decarboxylase [Halomonas elongata DSM 2581] gi|307218619|emb|CBV43889.1| arginine decarboxylase [Halomonas elongata DSM 2581] Length = 636 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 30/266 (11%), Positives = 77/266 (28%), Gaps = 34/266 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL------NQ 50 P + L + ++ A G + +K + + + + Sbjct: 64 PVLVRFTDILHDRVEQLCAAFDGAMAEEDFEGGYTAVYPIKVNQQHRVVEEILATQERGR 123 Query: 51 YMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQ 103 G + S E++ L G N I L + ++ +S+ Sbjct: 124 GRVGLEAGSKPELLAVLALSGDGPSLIVCNGYKDREYIRLALMGERLGHRVYLVVEKLSE 183 Query: 104 LNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDK--------IESE 154 L ++A+ L + + + S K + S+ G Sbjct: 184 LPLILEEAEHLGVRPRIGLRARLASVGKGKWQNTGGEKSKFGLTASQIQAMIERLSEADA 243 Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPV 211 + ++ + FH + + L+ + + ++ + +GGG+ + Sbjct: 244 LGSLQLVHFHLGSQIANIHDIQRGLRECARFYQNLLAMGAPVDTVDVGGGLGIDYEGTRS 303 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAI 237 + FC + +Y+ + + Sbjct: 304 RSFCS-INYSMREYARNVVTAFSQVC 328 >gi|332701702|ref|ZP_08421790.1| arginine decarboxylase [Desulfovibrio africanus str. Walvis Bay] gi|332551851|gb|EGJ48895.1| arginine decarboxylase [Desulfovibrio africanus str. Walvis Bay] Length = 639 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 88/305 (28%), Gaps = 29/305 (9%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH 67 + + Y K GV +K + D + +Y G + S E++ Sbjct: 85 ESFRAAIKKLDYKGKFRGV---YPIKVNQQEQVVDEVTRYGQRFHHGLEAGSKAELIAAL 141 Query: 68 EKF-GGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E YKD E + + S+L+ +A L+ + L Sbjct: 142 AMLRDKEACLVCNGYKDQEFIDLGLFATKMGYKLFFVLEMPSELDLIMSRAAYLNIRPLL 201 Query: 121 RINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNNCENKS 171 + ++ + G +E + L +H + + Sbjct: 202 GVRLKLATQAGGHWTESGGDRSIFGLNTSQLVEVVDSLKERGMLDCLQLLHYHLGSQIPN 261 Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + ++ ++ LGGG+ +F E+Y Sbjct: 262 IRDIRSAALEASRIYAELVKEGVKMGYLDLGGGLAVDYDG-SHTNFTNSRNYSLEEYCAD 320 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288 I E + + T+ I+E+ + LV S + ++ D ++ + Sbjct: 321 IIETVMETMENAGVDHHPTI--ITESGRALVAYYSVLLFNILDVSRFEAAPVPETLPEDT 378 Query: 289 TAMVC 293 + Sbjct: 379 PEHLV 383 >gi|17939910|emb|CAD19513.1| DAP decarboxylase [Rhizobium etli] Length = 61 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 13/38 (34%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCF 39 + TP+Y+ L + + + A+K Sbjct: 24 VGTPFYVYSTATLERHYRVFSEAFADVDSMVCYAMKAN 61 >gi|225427782|ref|XP_002269030.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 720 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 66/236 (27%), Gaps = 33/236 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ + + + +KC + + + ++ Sbjct: 117 PLIVRLPDVLQNRLESLQSAFDFAIQSQGYESHYQGVFPVKCNQDRFIVEDVVKFGSAFR 176 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L E +KD + A+ I+ + Sbjct: 177 FGLEAGSKPELLLAMSCLCKGNPEALLVCNGFKDADYIALALVARKLALNTVIVLEQEEE 236 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEI------- 155 L+ + +QKL + + + + + G + Sbjct: 237 LDLVINLSQKLSVHPVIGVRAKLRTKHAGHFGSTSGEKGKFGLTTIQILRVVRKLEQAGM 296 Query: 156 -KNVNGLMFHNNCENKSFL---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 ++ L FH + S + I E + I +GGG+ Sbjct: 297 LDSLQLLHFHIGSQIPSTDLLADGVSEAAQIYCELVRLGAHMRVIDIGGGLGIDYD 352 >gi|37523639|ref|NP_927016.1| arginine decarboxylase [Gloeobacter violaceus PCC 7421] gi|48474347|sp|Q7NE10|SPEA_GLOVI RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|35214644|dbj|BAC92011.1| arginine decarboxylase [Gloeobacter violaceus PCC 7421] Length = 644 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 82/306 (26%), Gaps = 48/306 (15%) Query: 12 QKLLNNLDTALYIR-------KNAG-VKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L + + G K + +K + + + ++ G + S Sbjct: 67 DILADRIARLNACFVEAIREYDYPGIYKGVYPVKVNQQRHVVEEVVEFGRPFQYGLEAGS 126 Query: 60 LYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------AQ 112 E+++ YKD E + + +F + AQ Sbjct: 127 KPELLIALATLKTPGALIICNGYKDSEYIETALLAQRLGHTPFVVIERFHELTLLIEAAQ 186 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMF 163 KL + + + ++ + + G + +E + ++ L F Sbjct: 187 KLGIRPLIGVRAKLTARGIGRWGDSTGDRAKFGLSAGEIMEVVAQLKAADLLSSLQLLHF 246 Query: 164 HNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK------------- 207 H + + L+ E +++ +GGG+ Sbjct: 247 HIGSQISAINVIKTALREASCVYVELAQMGAPMQYCDVGGGLAIDYDGSKTNFRASKNYN 306 Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS 263 Y V Q + E G AI ++ + L V+ +S + Sbjct: 307 MQEYAYDVVAAFQDACRTKNVPVPTLVSESGRAITSHQSVLVFDVMGVSHLQFGEPEPPA 366 Query: 264 SVEAHV 269 E + Sbjct: 367 RNEHSI 372 >gi|51236712|gb|AAT99013.1| ornithine decarboxylase [Glomerella lindemuthiana] Length = 278 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 72/278 (25%), Gaps = 35/278 (12%) Query: 54 GTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDK 110 G +S E+ E Y K + + F+ +L K Sbjct: 1 GFDCASKTEIDQVLSMGTSPERIIYAQPCKTNSYVRYVKAMGVKQMTFDNADELRKVARL 60 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + + + S + + + + NV G+ FH Sbjct: 61 FPDAELFLRIMTDDESSLCRLSMKFGAAKDATNELLAT--AKDLGLNVVGVSFHVGSGAS 118 Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYS 226 + F + + + F + Q++ + +GGG T +D + F + Sbjct: 119 DPMAFYKAVYDAHEVFEQGRAYGFQMKTLDIGGGFCGDTFEDMAAVLRGALDEYFPVSSN 178 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---------------- 270 V I EPG V+ T+ ++ + ++ Sbjct: 179 VNIIAEPGRYYVSAAFTIACNIIARRTVEDPAAEGEKCYMVYISGGLYGNFSSIMFDHQH 238 Query: 271 ---------DYLLYQESATIYPNTGP-YTAMVCGRSCL 298 LY + G + G +C Sbjct: 239 PVAKVLRAGPATLYDCPSANACPDGEGIRYSIWGPTCD 276 >gi|219114479|ref|XP_002176410.1| ornithine decarboxylase [Phaeodactylum tricornutum CCAP 1055/1] gi|217402656|gb|EEC42646.1| ornithine decarboxylase [Phaeodactylum tricornutum CCAP 1055/1] Length = 564 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 40/387 (10%), Positives = 93/387 (24%), Gaps = 63/387 (16%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-------TTSS 58 ++L+D L++ L + + V L ++ A + L++ Sbjct: 177 FWLVDLSSLVHRLASWKRTFR--DVVFLYQVRHNANAKLLQILHRSGAVGLVTTTKADI- 233 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT----------IIFNTVSQLNKFK 108 + L E+F + + +C + + + + + +F Sbjct: 234 ---QACLAAERFLDPRCSRMPCWDNCGVTCKPNGYIRKLVCDAHSRVLAVDGPDDVRRFA 290 Query: 109 DKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNN 166 + + I+ V L + +L E + S V G+ F + Sbjct: 291 TLINNFVARKSV-IDLPVLQYMIRLPQNLAEWKQLTEDTLQAVSEGSTESQVVGVSFDLS 349 Query: 167 CENKSFLCFSAMLKNIEK---------------EFGHFITQIEWISLGGGIHFTDKDYPV 211 + L E +E S + Sbjct: 350 AASGEENSRIRQLAVEELLDFLSSQETVTAEKLRVDLTGVPLEDGSFAAETVSLWQYLQS 409 Query: 212 KDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS 264 ++ + + + + N +D + Sbjct: 410 MPNVDKVTVDATHLLVSPAASLCTRIIGFRQTETKSNEIRNHYYIDDGCYGSLYQGAEEG 469 Query: 265 VEAHV-----PDYLLYQESATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGD 316 + + +++ + V G +C D + D Sbjct: 470 SFCPLPLISSRPSVNSNDTSGAADFAEETSVQLSTVWGPTCDGLDKVCTDIPLPLLHRDD 529 Query: 317 RISFED---VAGYNINRKNWFNGINMP 340 + F + V G FNG + P Sbjct: 530 WLVFPNIKSVGG----LCTAFNGFDPP 552 >gi|169245562|gb|ACA50827.1| LysA [Agrobacterium rhizogenes] Length = 157 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 37/153 (24%), Gaps = 21/153 (13%) Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 +E I LGGG+ + D ++ I +EPG + Sbjct: 3 GRPLETIDLGGGLGIPYFAGETPLDLATVSAAIPDLKALVQAHPLITDAHIIVEPGRFLA 62 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288 V + + +V H + Sbjct: 63 GPGGLYVAEVNSVKSSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIVAPAKMQADHDE 122 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 TA + G C D +K GD ++ Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKTGDLLAIL 155 >gi|108563397|ref|YP_627713.1| arginine decarboxylase [Helicobacter pylori HPAG1] gi|107837170|gb|ABF85039.1| arginine decarboxylase [Helicobacter pylori HPAG1] Length = 615 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 91/314 (28%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + +A K + LK +F + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ + +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAIRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKENNNPP 362 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|94265402|ref|ZP_01289155.1| Arginine decarboxylase [delta proteobacterium MLMS-1] gi|93454104|gb|EAT04436.1| Arginine decarboxylase [delta proteobacterium MLMS-1] Length = 642 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 23/264 (8%), Positives = 62/264 (23%), Gaps = 32/264 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYM---- 52 P + + L N ++ + +K + + + + Sbjct: 65 PMLIRFQDLLRNRVERINRAFAEAIAEAEYQNRFSGVYPVKVNQLREVVEEVIEAGRPFH 124 Query: 53 DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI-------IFNTVSQL 104 G S E+ + YKD + + + + Sbjct: 125 HGLEVGSKPELHAALALHEDPRSLIVCNGYKDRDYIRMALLGRKLDKKVILVVERVEEVE 184 Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------K 156 + + + +S K ++ G D + + Sbjct: 185 RIIAEVDKMQVVPLIGFRVRLMSGGKGKWEKSGGENAKFGLSSMDIMRASHLLKEAGLAA 244 Query: 157 NVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 N+ + FH + + + +E++ +GGG+ Sbjct: 245 NLKLVHFHIGSQVPDALTIKKAVREGAMFYAKLAKMGHGLEYLDVGGGLGVDYDG-SRTT 303 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAI 237 F + +Y+ + + Sbjct: 304 FHSSINYSLNEYARDVIYNIMDVC 327 >gi|302753700|ref|XP_002960274.1| hypothetical protein SELMODRAFT_139552 [Selaginella moellendorffii] gi|300171213|gb|EFJ37813.1| hypothetical protein SELMODRAFT_139552 [Selaginella moellendorffii] Length = 627 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 83/296 (28%), Gaps = 47/296 (15%) Query: 24 IRKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK--FGGETHAY 77 + + +KC + + + ++ D G + S E+++ K + Sbjct: 39 FFSTRHFQGVFPIKCNHDRYLLEDIVKFGDQCKFGLEAGSKPELLIAIAKLRGSKDALLI 98 Query: 78 NVAYKDCEIDAVLSNCD------------TIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125 YK D + I+ + +L + L + + + Sbjct: 99 CNGYKAFICDPDRVYIESVLLARQLGVNAIIVLEQMEELEMVIQACRILKVRPMVGVRAK 158 Query: 126 VSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFLCFS 176 +S + + G + + + L FH + S Sbjct: 159 LSTRHTGHWGGSSGDKGKFGLTVTEIVRVVYTLRKEGMLDCLQLLHFHIGSQIPSISIIK 218 Query: 177 AMLKNIEKEFGH---FITQIEWISLGGGIHFTDK---------------DYPVKDFCQRL 218 ++ F +++I +GGG+ +Y + Sbjct: 219 EAMREGSHIFCELALMGAPMQYIDVGGGLGIDYDGSKTQSSASTNYSMQNYANDVVAALV 278 Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272 K Q + E G A+ ++ + L VL E +N + + V + Y Sbjct: 279 DACILKGVAQPVIISESGRALASHHSVLVFDVLSTFERSENTSLANLEVLTNNSPY 334 >gi|94269477|ref|ZP_01291472.1| Arginine decarboxylase [delta proteobacterium MLMS-1] gi|93451200|gb|EAT02109.1| Arginine decarboxylase [delta proteobacterium MLMS-1] Length = 642 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 23/264 (8%), Positives = 62/264 (23%), Gaps = 32/264 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYM---- 52 P + + L N ++ + +K + + + + Sbjct: 65 PMLIRFQDLLRNRVERINRAFAEAIAEAEYQNRFSGVYPVKVNQLREVVEEVIEAGRPFH 124 Query: 53 DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI-------IFNTVSQL 104 G S E+ + YKD + + + + Sbjct: 125 HGLEVGSKPELHAALALHEDPRSLIVCNGYKDRDYIRMALLGRKLDKKVILVVERVEEVE 184 Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------K 156 + + + +S K ++ G D + + Sbjct: 185 RIIAEVDKMQVVPLIGFRVRLMSGGKGKWEKSGGENAKFGLSSMDIMRASHLLKEAGLAA 244 Query: 157 NVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213 N+ + FH + + + +E++ +GGG+ Sbjct: 245 NLKLVHFHIGSQVPDALTIKKAVREGAMFYAKLAKMGHGLEYLDVGGGLGVDYDG-SRTT 303 Query: 214 FCQRLKEFSEKYSVQIYLEPGEAI 237 F + +Y+ + + Sbjct: 304 FHSSINYSLNEYARDVIYNIMDVC 327 >gi|305677836|pdb|3NZP|A Chain A, Crystal Structure Of The Biosynthetic Arginine Decarboxylase Spea From Campylobacter Jejuni, Northeast Structural Genomics Consortium Target Br53 gi|305677837|pdb|3NZP|B Chain B, Crystal Structure Of The Biosynthetic Arginine Decarboxylase Spea From Campylobacter Jejuni, Northeast Structural Genomics Consortium Target Br53 Length = 619 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 86/289 (29%), Gaps = 45/289 (15%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 +++ N RK G K + LK G L + G + S E+ Sbjct: 57 KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 116 Query: 64 MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L +KD I A + T+ +++L D A K Sbjct: 117 LLAXAYNNEGAPITVNGFKDRELINIGFIAAEXGHNITLTIEGLNELEAIIDIAKERFKP 176 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 IGLR+ S I A S+ G + IE+ + + FH Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTXIHFHLG 235 Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209 + L I E ++ I+LGGG+ + Sbjct: 236 SQITEIHPLKKALNEAGNIYTELRKXGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 295 Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E + I++E G + N L VL++ Sbjct: 296 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 344 >gi|210135195|ref|YP_002301634.1| arginine decarboxylase [Helicobacter pylori P12] gi|210133163|gb|ACJ08154.1| arginine decarboxylase [Helicobacter pylori P12] Length = 615 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 91/314 (28%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + +A K + LK +F + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ + +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKY 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKENNNPP 362 Score = 40.1 bits (92), Expect = 0.51, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|56377971|dbj|BAD74163.1| arginine decarboxylase [Malus x domestica] Length = 728 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 29/236 (12%), Positives = 65/236 (27%), Gaps = 33/236 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L + L++ + + + +KC + + + ++ Sbjct: 112 PLIVRLPDVLKDRLESLQGAFDLAIRSHDYGSHYQGVYPVKCNQDRFVVEDIVKFGSPFR 171 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 G + S E++L + +KD E ++ + NTV L + ++ Sbjct: 172 FGLEAGSKPELLLAMSCLCKGHPDALLICNGFKDLEYISLALFARKLALNTVIVLEQEEE 231 Query: 110 KAQKLHKKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIESEI------- 155 + L + P + + + G + Sbjct: 232 LDLVVDFSQKLGVRPVIGVRAKLKTKHSGHFGSTSGEEGKFGLTTTQILRVVKKLDKLGM 291 Query: 156 -KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 L FH + S + I E ++ I +GGG+ Sbjct: 292 LDCFQLLHFHTGSQIPSTALLADGVSEASQIYCELVRLGAHMKVIDIGGGLGIDYD 347 >gi|308184772|ref|YP_003928905.1| arginine decarboxylase [Helicobacter pylori SJM180] gi|308060692|gb|ADO02588.1| arginine decarboxylase [Helicobacter pylori SJM180] Length = 615 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 88/314 (28%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + A K + LK + + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKENNNPP 362 Score = 40.5 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + + + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|46199579|ref|YP_005246.1| arginine decarboxylase [Thermus thermophilus HB27] gi|46197205|gb|AAS81619.1| arginine decarboxylase [Thermus thermophilus HB27] Length = 630 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 83/312 (26%), Gaps = 48/312 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM---- 52 P L Q L + A K + +K + +T+ + Sbjct: 63 PLVLRFPQILEARVRALNEAFLEAMAKYGYQGTYRGVYPVKVNQRRLVLETVARAGRPYH 122 Query: 53 DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--- 108 G + S E+ L E +KD + + + N V L KF Sbjct: 123 LGLEAGSKPELALILAQDLSEEALITTNGFKDDDFVRLALMGRKLGRNVVITLEKFAELF 182 Query: 109 ---DKAQKLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIES--------EIK 156 +++L K L I + + + ++ G + + + + Sbjct: 183 RVLRLSKELGVKPLLGIRYKLKAKGAGQWEASGGENAKFGLTTPEIVRAVEVLQEEGLLD 242 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + L H + + + + +++LGGG+ Sbjct: 243 ALVMLHAHIGSQVTDIRRIKAAVREAAQTYVQLRKLGAPLRYLNLGGGLAVDYDGSKTNF 302 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + + E + + E G AI L V+D+ Sbjct: 303 YASANYTLSEYAENLVYVTKEVVEAQGEPHPILVTESGRAITAYHEVLVLQVIDVIAPPG 362 Query: 257 NLVIVDSSVEAH 268 EAH Sbjct: 363 EARPSPPPPEAH 374 >gi|85711055|ref|ZP_01042115.1| arginine decarboxylase [Idiomarina baltica OS145] gi|85694968|gb|EAQ32906.1| arginine decarboxylase [Idiomarina baltica OS145] Length = 636 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 30/313 (9%), Positives = 84/313 (26%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIR------KNAGVKLL--LALKCFAAWGMFDTLNQYMD--- 53 P + L + ++ + +K + + + + Sbjct: 61 PAVIRFHDILRSQVEIINETFNKCIEEAEYNGQYCGVFPIKVNQMREVVEEIMDAGEPYN 120 Query: 54 -GTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105 G + S E+M E YKD + + I+ S+L Sbjct: 121 YGLEAGSKPELMAVMAYNDNPEALTVLNGYKDKDYLTLALLGRQLKRKMIIVVEKFSELE 180 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156 A++L + + + + + + G + + + Sbjct: 181 MLIPLAKQLGVEPMIGLRSKMMVRSSGKWAGSSGDRAKFGLSIAEILNAIERLREEDMLH 240 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---- 209 L FH + + + + + ++E++ +GGG+ Sbjct: 241 CAKLLHFHIGSQLSDIRKIKEAVSEGARLYAKLVQEGVELEYLDIGGGLGIDYDGTSSTT 300 Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V +++ + I E G A+ + + + + ++ Sbjct: 301 DSSRNYSTEEYVADVVWGIKQVCDLENVPHPNIVSESGRAMTAHHSCVVSNIVGEVNPSG 360 Query: 257 NLVIVDSSVEAHV 269 + ++ + H+ Sbjct: 361 TDFDLSATEDEHI 373 >gi|88802967|ref|ZP_01118494.1| arginine decarboxylase [Polaribacter irgensii 23-P] gi|88781825|gb|EAR13003.1| arginine decarboxylase [Polaribacter irgensii 23-P] Length = 482 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 43/392 (10%), Positives = 109/392 (27%), Gaps = 61/392 (15%) Query: 13 KLLNNLDT----ALYIRKNAGVKL--LLAL--KCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 K+ N++ K + K + + + +SS +++ Sbjct: 52 KISENINKAKGWFQASIDKHNYKGNYFYSYCTKSSHFKHVLNEALKNDIHIETSSAFDID 111 Query: 65 LGH---EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------- 114 + ++ + + + + + + I + + + + Sbjct: 112 IVLNLKKEGKIKDSTFVICNGFKRDQYIQNIGNLINSGHENCIPIIDNFEELPLLQKETS 171 Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENK- 170 K+G+RI + ++ ++E + L F N + Sbjct: 172 KPFKVGIRIASEEEPKFEFYTSRLGIGYKNIVSFYEREIADNEQVELKMLHFFINTGIRD 231 Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225 + N+ ++ +++GGG + D+ + + ++ Sbjct: 232 NAYYWNELMKCLNVYINLKKVCPTLDSLNIGGGFPIKNSLAFDFDYQYMIDEIVHQIKQA 291 Query: 226 S-------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQ 276 I+ E G V + +L + + +++SS +PD Sbjct: 292 CDEAEVSVPNIFTEFGSFTVGESGATIYEILYQKKQNDRERWNMINSSFITTLPDSWAIN 351 Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEKPVKIGDRISFE 321 + N ++ G +C + D + P+ IG F Sbjct: 352 KRFIMLPINKWNKQYERVLLGGLTCDSDDYYNSEQHINGIYLPVYEKNNPLYIG----FF 407 Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVD 348 + Y + F G I P + + D Sbjct: 408 NTGAYQESIG-GFGGLQHCLIPHPKHLLLDRD 438 >gi|115719588|ref|XP_001180893.1| PREDICTED: similar to ornithine decarboxylase, partial [Strongylocentrotus purpuratus] gi|115802940|ref|XP_001196287.1| PREDICTED: similar to ornithine decarboxylase, partial [Strongylocentrotus purpuratus] Length = 94 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 21/55 (38%), Gaps = 2/55 (3%) Query: 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60 +++ D ++ ++R V+ A+KC + L+ G +S Sbjct: 42 FFIGDLGDIIQKHR--KWLRNLPRVEPHYAVKCNPDLHVLKLLSGLNLGFDCASK 94 >gi|329895587|ref|ZP_08271083.1| Biosynthetic arginine decarboxylase [gamma proteobacterium IMCC3088] gi|328922266|gb|EGG29616.1| Biosynthetic arginine decarboxylase [gamma proteobacterium IMCC3088] Length = 679 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 90/306 (29%), Gaps = 48/306 (15%) Query: 11 KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58 + L + + NA + + +K + + + Y G + Sbjct: 113 ENLLDHRISAINEAFANAIASAGYNNEYRGVFPIKVNQQCHVVEEIADYGARYHHGLEAG 172 Query: 59 SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 S E+++ + + YKD E + + N L + + + Sbjct: 173 SKAELIIALTQLKDRHSLIICNGYKDQEFIELGLYARKMGINCFFVLETLGELDIIIERS 232 Query: 118 IGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLM 162 L I P++ + + + S G + + + + L Sbjct: 233 EALGIEPAIGARIRLSSMVEGHWNEDSGDRSIFGLSTDSLLCVVDKLRAHNMLHCMQMLH 292 Query: 163 FHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK----------DY 209 H + + + + +I LGGG+ + +Y Sbjct: 293 CHLGSQIPNIRNIRSGVLEACRYYTGLVAEGAAMGYIDLGGGLAVDYEGRRTNETHSMNY 352 Query: 210 PVKDFCQRLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 + ++C + E ++ + E G A+V ++ L +LD+ ++ + Sbjct: 353 GLNEYCANIIETLQESLDSEDVPHPVVITESGRALVAYSSMLLFNILDVRDHKPGKLPET 412 Query: 263 SSVEAH 268 E H Sbjct: 413 IPDEGH 418 >gi|254423696|ref|ZP_05037414.1| arginine decarboxylase [Synechococcus sp. PCC 7335] gi|196191185|gb|EDX86149.1| arginine decarboxylase [Synechococcus sp. PCC 7335] Length = 681 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 96/313 (30%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52 P + + L + L+ A + + +KC + + L ++ Sbjct: 105 PVLIRFSEILEDRLERINACFAKAIARYSYEGVYQGVFPVKCNQQRHIVEDLVRFGKAFQ 164 Query: 53 DGTTSSSLYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLN 105 G + + E+M+ G N + I+ + I+ V ++ Sbjct: 165 FGLEAGTKPELMIALASLNTPGALIICNGYKDESYIETAMLGQRLGQKPIIVLEQVEEVA 224 Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIK 156 A++L + L + ++ + + G + I + Sbjct: 225 VAIATAKRLGIQPNLGVRAKLAAKGSGRWGTSAGDRAKFGLTIPEIITVVEKLKAADMLD 284 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD------- 206 ++ L FH + + ++ + + + ++ +GGG+ Sbjct: 285 SLQLLHFHIGSQVNAISVIKDAMREACQIYVELVSLGAPMGYLDVGGGLGVDYDGSKTSS 344 Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+Y ++++ + + + E G AI ++ + L VL SE I Sbjct: 345 QGSKNYSIQNYANDVVAHVKDACVARELPMPTLVSESGRAIASHQSVLIFDVLGTSEAIP 404 Query: 257 NLVIVDSSVEAHV 269 E ++ Sbjct: 405 EDPAPYQDGEHNL 417 >gi|332519087|ref|ZP_08395554.1| Orn/DAP/Arg decarboxylase 2 [Lacinutrix algicola 5H-3-7-4] gi|332044935|gb|EGI81128.1| Orn/DAP/Arg decarboxylase 2 [Lacinutrix algicola 5H-3-7-4] Length = 465 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 54/394 (13%), Positives = 113/394 (28%), Gaps = 61/394 (15%) Query: 13 KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLY--- 61 ++ NN+ + K K + + +SS + Sbjct: 52 QISNNIQRAKQWFANAIEKHDYKGTYNYCYCTKSSHFKHVLNEALTNNIHIETSSAFDID 111 Query: 62 --EVMLGHEKFGGETHAYNVAYKDCEI----DAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + K ET + +K + +++N + + + ++ Sbjct: 112 IVENLKAEGKITNETFVISNGFKRAQYVTNIARLINNGQKNCIPIIDNYEEIDLLSAEIK 171 Query: 116 KKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171 + I + +R + + +E N+ L F N + Sbjct: 172 GNYNIGIRIASEEEPKFEFYTSRLGIGYKNIVPFYKNKIQNNEKVNLKMLHFFINTGIRD 231 Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQRLKEF 221 + L+ + +++GGG D +Y V + ++K Sbjct: 232 NAYYWNELQKCLKVYTSLKKICPSLNSLNIGGGFPIKNSLAFDFDYEYMVDEIVNQIKLT 291 Query: 222 SEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276 E+ I+ E G V + VL + +++SS +PD Sbjct: 292 CEEEEVDVPNIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNMINSSFITTLPDTWAIN 351 Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321 + A + ++ G +C + D +++ +KP+ IG F Sbjct: 352 KRFIMLAINRWESSYERVLLGGLTCDSDDYYNSEQHMNAIYLPKYNKDKPLYIG----FF 407 Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350 + Y F G I P + N D Sbjct: 408 NTGAYQETIG-GFGGLQHCLIPSPKHILINKDKD 440 >gi|256822352|ref|YP_003146315.1| arginine decarboxylase [Kangiella koreensis DSM 16069] gi|256795891|gb|ACV26547.1| arginine decarboxylase [Kangiella koreensis DSM 16069] Length = 644 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 37/293 (12%), Positives = 82/293 (27%), Gaps = 54/293 (18%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD---------- 53 L N +++ A + +K + + + Q Sbjct: 73 DILHNRVNSLCEAFNQAIKEYEFQGRYTICYPIKVNQQRRVVEEIVQSQAAINNNNDKQI 132 Query: 54 GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLS-----NCDTIIFNTVSQLNK 106 G + S E+M L + T N I L + I+ +++L Sbjct: 133 GLEAGSKPELMAVLALSEHTNSTIVCNGYKDREYIRTALIGTQLGHKVYIVVEKLTELQL 192 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKN 157 ++A+ + K + + ++ + + G + ++ Sbjct: 193 VLEEAESMGVKPTIGVRARLASKGESKWQTSGGDHSKFGLSASQILRLVETLQASDQVDI 252 Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------- 207 L FH + S LK + + +E + +GGG+ + Sbjct: 253 FKLLHFHLGSQITSIRDIQNALKECARFYAELHALGVPVETVDVGGGLGVDYEGTRSQSH 312 Query: 208 ---DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLD 250 +Y + ++ + I E G A+ + L V+D Sbjct: 313 CSINYSLSEYANNVVWAFYDVANENDLPHPNIITESGRALTAHHAVLIANVID 365 >gi|15982891|gb|AAL09792.1| AT4g34710/T4L20_290 [Arabidopsis thaliana] Length = 711 Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 69/237 (29%), Gaps = 35/237 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L+ + + + +KC + + + ++ Sbjct: 107 PLIVRFPDVLKNRLECLQSAFDYAIKSQGYDSHYQGVYPVKCXQDRFVVEDIVKFGSSFR 166 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L + +KD E ++ I+ + Sbjct: 167 FGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFKDAEYISLALLGRKLALNTVIVLEQEEE 226 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ + +QK++ + GLR +S + + G + Sbjct: 227 LDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVRKLRQSG 285 Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + L FH + S A + E ++ I +GGG+ Sbjct: 286 MLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYD 342 >gi|2347054|emb|CAA65585.1| arginine decarboxylase [Vitis vinifera] Length = 630 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 67/236 (28%), Gaps = 33/236 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ + + + +KC + + + ++ Sbjct: 27 PLIVRLPDVLQNRLESLQSAFDFAIQSQGYESHYQGVFPVKCNQDRFIVEDVVKFGSAFR 86 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L E +KD + A+ I+ + Sbjct: 87 FGLEAGSKPELLLAMSCLCKGNPEALLVCNGFKDADYIALALVARKLALNTVIVLEQEEE 146 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEI------- 155 L+ + +QKL + + + + + + G + Sbjct: 147 LDLVINLSQKLSVRPVIGVRAKLRTKHAGHFGSTSGEKGKFGLTTTQILRVVRKLEQAGM 206 Query: 156 -KNVNGLMFHNNCENKSFL---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 ++ L FH + S + I E + I +GGG+ Sbjct: 207 LDSLQLLHFHIGSQIPSTDLLADGVSEAAQIYCELVRLGAHMRVIDIGGGLGIDYD 262 >gi|91214945|ref|ZP_01251917.1| putative arginine decarboxylase [Psychroflexus torquis ATCC 700755] gi|91186550|gb|EAS72921.1| putative arginine decarboxylase [Psychroflexus torquis ATCC 700755] Length = 466 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 50/394 (12%), Positives = 105/394 (26%), Gaps = 61/394 (15%) Query: 13 KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 K+ N+ + + K + D + +SS +++ Sbjct: 52 KISENIHRAQKWFKDAIEKNNYRATYNYCYCTKSSHFKHVLDEALKNDIHIETSSAFDID 111 Query: 65 LG-----HEKFGGETHAYNVAYKDCEI------DAVLSNCDTIIFNTVSQLNKFKDKAQK 113 + K +T+ +K + + + I + KA Sbjct: 112 IVNSLKERGKITKDTYVICNGFKRDQYVSNIANLINNGHQNCIPVIDNYEEIDLLTKAID 171 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENKS 171 KIG+RI + ++ + L F N + Sbjct: 172 KDFKIGIRIASEEEPKFEFYTSRLGIGYKNIIPFYEDQIKNNDQVELKMLHFFINTGIRD 231 Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225 + L+ ++ +++GGG + +Y + + + + Sbjct: 232 NAYYWNELQKCLRVYTRLKKVCPSLDSLNIGGGFPIKNSLAFEYDYQYIIEEVVSQIKLT 291 Query: 226 S-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276 I+ E G V + VL + I++SS +PD Sbjct: 292 CEEEEVPVPHIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNIINSSFITTLPDSWAIS 351 Query: 277 ESATI----YPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321 + + N ++ G +C + D ++ E P+ IG F Sbjct: 352 KRFIMLALNRWNDRYERVLLGGLTCDSDDYYNSEQHVNAIYLPKYEKENPLYIG----FF 407 Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350 + Y F G I P + + Sbjct: 408 NTGAYQETIG-GFGGLQHCLIPSPKHILIQKNDD 440 >gi|221105722|ref|XP_002170379.1| PREDICTED: similar to ornithine decarboxylase, partial [Hydra magnipapillata] Length = 127 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 40/129 (31%), Gaps = 5/129 (3%) Query: 36 LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSN 92 +K + L + +S E+ + E + + A N Sbjct: 1 VKSNPNHVVIALLARLGVNFDCASKCEIETVLDMDVDPERIIFANPCKQESHVKYAREKN 60 Query: 93 CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 + F++ +L K K+ I ++++ S S K + +K + Sbjct: 61 VRKMTFDSEGELYKIKENFPGAELVIRIKVDDSNSAYKLGRKFGASLENT--QKLLQLAK 118 Query: 153 SEIKNVNGL 161 NV G+ Sbjct: 119 DLDLNVTGV 127 >gi|317011227|gb|ADU84974.1| arginine decarboxylase [Helicobacter pylori SouthAfrica7] Length = 615 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 35/314 (11%), Positives = 86/314 (27%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + A K + LK + + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ + +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKENNNPP 362 Score = 40.1 bits (92), Expect = 0.52, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY ++S + P Sbjct: 415 HLIVKKAVQLLYFKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQSFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + + + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTELSVVFDEKGDYEV 552 >gi|55981609|ref|YP_144906.1| arginine decarboxylase [Thermus thermophilus HB8] gi|55773022|dbj|BAD71463.1| arginine decarboxylase [Thermus thermophilus HB8] Length = 628 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 84/302 (27%), Gaps = 44/302 (14%) Query: 11 KQKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYE 62 + ++ + + L G + + +K + +T+ + G + S E Sbjct: 71 EARVRDLNEAFLEAMAKYGYQGTYRGVYPVKVNQRRLVLETVARAGRPYHLGLEAGSKPE 130 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK------DKAQKLH 115 + L E +KD + + + N V L KF +++L Sbjct: 131 LALILAQDLSEEALITTNGFKDDDFVRLALMGRKLGRNVVITLEKFAELFRVLRLSKELG 190 Query: 116 KKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIES--------EIKNVNGLMFHNN 166 K L I + + + ++ G + + + + + L H Sbjct: 191 VKPLLGIRYKLKAKGAGQWEASGGENAKFGLTTPEIVRAVEVLQEEGLLDALVMLHAHIG 250 Query: 167 CE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------------- 207 + + + + +++LGGG+ Sbjct: 251 SQVTDIRRIKAAVREAAQTYVQLRKLGAPLRYLNLGGGLAVDYDGSKTNFYASANYTLSE 310 Query: 208 -DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE 266 + + + E + + E G AI L V+D+ E Sbjct: 311 YAENLVYVTKEVVEAQGEPHPILVTESGRAITAYHEVLVLQVIDVIAPPGEARPSPPPPE 370 Query: 267 AH 268 AH Sbjct: 371 AH 372 >gi|261749633|ref|YP_003257319.1| arginine decarboxylase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497726|gb|ACX84176.1| arginine decarboxylase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 463 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 79/300 (26%), Gaps = 40/300 (13%) Query: 90 LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD 149 N I+ N+ I + + + + Sbjct: 150 FYNTIPILDNSDELEKLSFFIHYPFKLGIRIASEEEPKFEFYTSRLGIGYKDIIVFYLNK 209 Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTD 206 + + L F N K + L + +++ +++GGG Sbjct: 210 IKNNPKVELKMLHFFINTGIKDTAYYWNELFKCLHIYAKLKKIAPELDILNIGGGFPIKT 269 Query: 207 KD---YPVKDFCQRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLD--ISEN 254 Y + + +K+ IY E G V + + +L + Sbjct: 270 SMSFKYDYEYMTNEIVYQIKKFCQEENISEPHIYTEFGAYTVGESGGIIYRILSQKRQND 329 Query: 255 IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGD--------- 301 + ++DSS +PD A N + G +C + D Sbjct: 330 REKWNMIDSSFMTTLPDTWAISRRFIMMAINRWNDSYERVFLGGLTCDSDDYYNSEQHMN 389 Query: 302 --IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAI 354 F P+ IG F + Y + + G I P + + D K + Sbjct: 390 AIYLPRFRENPPLYIG----FFNTGAYQDTI-SGYGGVHHCLIPQPIHILIDHDDQKKLV 444 >gi|302768036|ref|XP_002967438.1| hypothetical protein SELMODRAFT_144682 [Selaginella moellendorffii] gi|300165429|gb|EFJ32037.1| hypothetical protein SELMODRAFT_144682 [Selaginella moellendorffii] Length = 573 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 77/297 (25%), Gaps = 47/297 (15%) Query: 25 RKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK--FGGETHAYN 78 + + +KC + + + ++ D G + S E+++ K + Sbjct: 40 FSTRHFQGVFPIKCNHDRYLLEDIVKFGDRCKFGLEAGSKPELLIAIAKLRGSKDALLIC 99 Query: 79 VAYKDCEIDAVLSNCD------------TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126 YK D + I+ + +L + L + + + + Sbjct: 100 NGYKAFICDPDRVYIESVLLARQLGVNAIIVLEQMEELEMVIQACRILGVRPMVGVRAKL 159 Query: 127 SYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFLCFSA 177 S + + G + + + L FH + S Sbjct: 160 STKHTGHWGGSSGDKGKFGLTVTEIVRVVYTLRKEGMLDCLQLLHFHIGSQIPSISIIKE 219 Query: 178 MLKNIEKEFGH---FITQIEWISLGGGIHFTDK---------------DYPVKDFCQRLK 219 ++ F +++I +GGG+ +Y + Sbjct: 220 AMREGSHIFCELALMGAPMQYIDVGGGLGIDYDGSKTQSSASTNYSMQNYANDVVAALVD 279 Query: 220 EFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274 K Q + E G A+ ++ + L VL E + Sbjct: 280 ACILKGVAQPVIISESGRALASHHSVLVFDVLSTFERPAADQDPGEYLLHTFEKVYN 336 >gi|167909409|ref|ZP_02496500.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 112] Length = 185 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 49/172 (28%), Gaps = 18/172 (10%) Query: 192 QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 + ++LGGG D + + K ++ E G AI N T V + Sbjct: 15 PVTHLNLGGGFSEKGHDDATFERYRARIAPLAKRYTLVH-EAGRAIFANAGVFVTRVRAV 73 Query: 252 SENIKNLVIVDSSVEAHVP--------------DYLLYQESATIYPNTGPYTAMVCGRSC 297 ++ V +H L+ +A + G +C Sbjct: 74 KVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAPTLVPAGAADAHRAPNARPITFVGNTC 133 Query: 298 LAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNV 347 D+ G + + GD + F Y+ + + F P Sbjct: 134 NRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSYTVSGFLSH-KPAQVYIRQ 184 >gi|317012807|gb|ADU83415.1| arginine decarboxylase [Helicobacter pylori Lithuania75] Length = 615 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 88/314 (28%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + +A K + LK +F + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ + +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKENNNPP 362 Score = 40.1 bits (92), Expect = 0.51, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|255021517|ref|ZP_05293561.1| Biosynthetic arginine decarboxylase [Acidithiobacillus caldus ATCC 51756] gi|209574084|gb|ACI62980.1| arginine decarboxylase SpeA [Acidithiobacillus caldus] gi|254969045|gb|EET26563.1| Biosynthetic arginine decarboxylase [Acidithiobacillus caldus ATCC 51756] Length = 629 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 40/293 (13%), Positives = 89/293 (30%), Gaps = 46/293 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTL---NQYMD 53 P L Q L + + A + +K + +++ Sbjct: 61 PCLLRFPQILAQRVQSLQSAFAAAMAAWNYPAPYTAVYPIKVNQHRRVVESILQAGDGGV 120 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107 G + S E++ + YKD E + + ++ S+L Sbjct: 121 GLEAGSKPELLTVLALSPEKATIVCNGYKDAEYIRLALMGERLGRRVFLVVEKSSELPLI 180 Query: 108 KDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158 A++L + + + S + S+ G + ++ +N+ Sbjct: 181 LGIARELQVQPRIGVRARLASAGAGKWQNTGGEKSKFGLSSHEILQLLEDLRAADALQNL 240 Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + + +E H I + +GGG+ + Sbjct: 241 QLLHFHLGSQIPNIQHIQGGMRECARLYQELRHQGADIRVVDVGGGLGVDYEGTHSRAYC 300 Query: 208 --DYPVKDFCQRLKEFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLDI 251 +Y V D+ Q + + + +L E G A+ + L + ++D+ Sbjct: 301 SVNYRVSDYAQSVVGILAELCQREHLPYPEIVSESGRALTAHHAVLISNIIDV 353 >gi|127512548|ref|YP_001093745.1| arginine decarboxylase [Shewanella loihica PV-4] gi|166220857|sp|A3QDD8|SPEA_SHELP RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|126637843|gb|ABO23486.1| arginine decarboxylase [Shewanella loihica PV-4] Length = 637 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 80/311 (25%), Gaps = 55/311 (17%) Query: 1 MIKT----PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMF-DT 47 M+K+ P + Q L + +++ + L+ +K + + Sbjct: 53 MVKSGVALPVLVRFPQILHHRVNSLCNAFNQAITRYDYQSDYLLVYPIKVNQQQTVVEEI 112 Query: 48 LNQYMD------GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNT 100 L + G + S E+M + YKD E + + + Sbjct: 113 LASQVSKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDVEYIRLALIGEKLGHQV 172 Query: 101 VSQLNKFKDKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKIE- 152 L K + L + L + P + K S+ G + Sbjct: 173 YIVLEKLSELKVVLEEAKKLGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLNV 232 Query: 153 -------SEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202 + ++ L FH + + + E ++ +GGG+ Sbjct: 233 INSLKDEDMLDSLQLLHFHLGSQIANIRDIRSGVSEAGRFYCELQKMGANVKCFDVGGGL 292 Query: 203 HFTDK--------------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLN 245 + L + ++ + E G + + L Sbjct: 293 AVDYDGTRSQSSNSMNYGLTEYANNIVSVLNDMCREHDQPMPRLISESGRYLTAHHAVLI 352 Query: 246 TTVLDISENIK 256 T V+ Sbjct: 353 TDVIGTEAYKP 363 >gi|56404221|gb|AAV87173.1| arginine decarboxylase [Phaseolus vulgaris] Length = 386 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 93/327 (28%), Gaps = 44/327 (13%) Query: 28 AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVA 80 + + + +KC + + + ++ G + S E++L + Sbjct: 1 SHYQGVYPVKCNQDRFVVEDIVKFGSPFRFGLEAGSKPELLLAMSCLCKGNPDALLICNG 60 Query: 81 YKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFI 132 +KD E ++ + I+ +++ + ++KL K GLR +S Sbjct: 61 FKDAEYISLALVANKLALNTVIVLEQEEEVDLIIELSKKLCIKPVIGLRAKLRTKHSGHF 120 Query: 133 LADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKN 181 R S+ G + + L FH + S Sbjct: 121 GGYF-RRESKFGLTTAQILRVVKKLDLAGMLDCLQLLHFHIGSQIPSTALLADGVGEAAQ 179 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 I E + I +GGG+ D + E+Y+ + Sbjct: 180 IYCELVRLGANMRVIDIGGGLGIDYDGSKSCDSDISVGYSLEEYASAVVHAI------QC 233 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301 +V + ++ + S V + + + + + AGD Sbjct: 234 VCDRRSVKNPVICSESGRAIVSHQSILVFEAVGTSTTVGGVSSAFSAPYV-------AGD 286 Query: 302 IFGEFHFEKPVKI-GDRISFEDVAGYN 327 + ++ F GD E Y Sbjct: 287 LSEDYRFLSEAAFGGDY---ESCLAYT 310 >gi|257459504|ref|ZP_05624613.1| arginine decarboxylase [Campylobacter gracilis RM3268] gi|257442929|gb|EEV18063.1| arginine decarboxylase [Campylobacter gracilis RM3268] Length = 612 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 88/290 (30%), Gaps = 45/290 (15%) Query: 11 KQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQ----YMDGTTSSSLYE 62 K++++ K G K + LK G L Y G + S E Sbjct: 56 KKQIVEIYSNFNRAIKEFGYKGKFHAVYPLKVNQFPGFVRNLVDIGEPYGYGLEAGSKPE 115 Query: 63 VMLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QK 113 ++L +KD I A + + T+ +++L + A Sbjct: 116 LLLAMAYNKYGAPITVNGFKDKELINIGFIAAEMGHNVTLTIEGLNELETIIETAKERFA 175 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHN 165 IGLRI S S + A S+ G + IE+ I+ + FH Sbjct: 176 PKPFIGLRIRLHNSGSG-LWAKSGGINSKFGLTSTELIEAINLLKKNDLIEQFTMIHFHI 234 Query: 166 NCENKSFLCFS---AMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKD------------- 208 + NI E ++ I+LGGG+ Sbjct: 235 GSQITEIHPLKKALIEAGNIYTELRKMGAKNLKSINLGGGLAIEYSQAKESSSRNYTLKE 294 Query: 209 --YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E ++ I++E G + + L +L++ Sbjct: 295 YANDVVFLLKSIAEDKKEAEPDIFIESGRYVAASHAVLVAPILELFTQEY 344 >gi|152990564|ref|YP_001356286.1| arginine decarboxylase [Nitratiruptor sp. SB155-2] gi|151422425|dbj|BAF69929.1| arginine decarboxylase [Nitratiruptor sp. SB155-2] Length = 612 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 77/290 (26%), Gaps = 45/290 (15%) Query: 11 KQKLLNNLDTALYIRKNAGVK----LLLALKCFAAW----GMFDTLNQYMDGTTSSSLYE 62 K+++ N K + LK + + +Y G + S E Sbjct: 56 KKQIDNLFKEFQKSIDQFNYKGNFNAVFPLKVNQFPNFVSSLVEIAKEYNYGLEAGSKAE 115 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---------AQK 113 +++ +KD + + + ++T + + + Sbjct: 116 LIIAMAYNNKNAPITVNGFKDKGMITLGFLAAKMGYDTTLTIEGLGELENIIEAAKEYKD 175 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHN 165 IGLRI S I A S+ G + +E+ + + FH Sbjct: 176 PIPNIGLRIRLHSSGIG-IWAKSGGINSKFGLTATELLEAMELLKRNDLLEKFTMIHFHI 234 Query: 166 NCENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQR---- 217 + L+ + + I+LGGG+ + Sbjct: 235 GSQIGEINPVKKALREAGNIYAELKKMGAMNLRNINLGGGLAVEYSQHENVHQRNYTLTE 294 Query: 218 -----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + I+ E G I + L VL++ Sbjct: 295 FTNDVVFLLKEIAQQKGVEEPNIFTESGRFIAASHAVLIAPVLELFSQEY 344 >gi|218296254|ref|ZP_03497010.1| arginine decarboxylase [Thermus aquaticus Y51MC23] gi|218243326|gb|EED09856.1| arginine decarboxylase [Thermus aquaticus Y51MC23] Length = 630 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 82/295 (27%), Gaps = 48/295 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P L Q L + A G + + +K + +T+ + Sbjct: 63 PLVLRFPQILEARVRELNEAFLRAMEKYAYRGGYRGVYPVKVNQRRLVLETVARAGRPYH 122 Query: 53 DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--- 108 G + S E+ L E +KD + + + N V L KF Sbjct: 123 YGLEAGSKPELALILAQDLSKEALITTNGFKDDDFIRLALMGKKLGRNVVITLEKFAELP 182 Query: 109 ---DKAQKLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIES--------EIK 156 ++++ + L I + + + ++ G + +++ + Sbjct: 183 RVLRLSREVGVRPSLGIRYKLKAKGAGQWEASGGENAKFGLTTPEIVKAVEILKEEGLLD 242 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + L H + + + + +++LGGG+ Sbjct: 243 TLVMLHAHIGSQVTDIRRIKAAVREAAQTYVQLRKLSAPLRYLNLGGGLAVDYDGSKTNF 302 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 + + + E + + E G A+ L V+D+ Sbjct: 303 YASANYTLQEYAEDLVYVTKEVVEAHGEPHPILVTESGRAVTAYHEVLVLEVIDV 357 >gi|307637695|gb|ADN80145.1| Arginine decarboxylase [Helicobacter pylori 908] gi|325996297|gb|ADZ51702.1| Arginine decarboxylase [Helicobacter pylori 2018] gi|325997886|gb|ADZ50094.1| Arginine decarboxylase [Helicobacter pylori 2017] Length = 615 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 35/314 (11%), Positives = 86/314 (27%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + +A K + LK + + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKENNNPP 362 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|159901027|ref|YP_001547274.1| Orn/DAP/Arg decarboxylase 2 [Herpetosiphon aurantiacus ATCC 23779] gi|159894066|gb|ABX07146.1| Orn/DAP/Arg decarboxylase 2 [Herpetosiphon aurantiacus ATCC 23779] Length = 576 Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 47/392 (11%), Positives = 98/392 (25%), Gaps = 45/392 (11%) Query: 20 TALYIRKNAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG----HEKFGGET 74 A G L A K + + T +S+ +V++ + E Sbjct: 132 AAQAASSYTGSFLYAYATKANFSEEVVRTALNAGAHYETSAAADVVIAHHLWRQGVLSED 191 Query: 75 --HAYNVAYKDCE---IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY- 128 N + + I A+ + + L++ + + + Sbjct: 192 RYIFCNGSKEPMYLDGILALRQAGYERVVAVLDDLDELDYILAHCRVPMLFGVRERHAPD 251 Query: 129 ---SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185 A+ + ++ + + + + A L Sbjct: 252 VVDRNHAGAERFGLTPAEMQLVAQRLAGTQHQLVVYHAMVGSQIEDAAAWEARLARSANA 311 Query: 186 FGHFI---TQIEWISLGGGIH---------FTDKDYPVKDFCQRLKEFSEK--YSVQIYL 231 + + + GGG+ F + +E + I Sbjct: 312 YAALASTTPSLTMFNFGGGMPTSGYDLAFQFDYVGFLTNLMANTQAICAEHGVAAPMIIA 371 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV--PDYLLYQESATIYPNTGPYT 289 E G V N V + E + V PD L+ + + P G T Sbjct: 372 ECGRYTVANHNLYLIEVGRVKEAGAIEPWYLLNGSLMVSAPDTLIVDQEFVVVPLDGWDT 431 Query: 290 ----AMVCGR-SCLAGDIFGE----FHFEKPVKIGDRISFEDVAGYNINR-----KNWFN 335 + GR +C + D++ + G ++ V Y Sbjct: 432 AVQAVRLGGRRTCDSDDLYPRSHRPALMLPEFQAGMVLAVCGVGAYQ-AMIGGKGGAHHC 490 Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367 + DG +RE + + +S Sbjct: 491 LNPEMRRIIIEQDGDQLVMREIAPQNLMAQMS 522 >gi|208434905|ref|YP_002266571.1| arginine decarboxylase [Helicobacter pylori G27] gi|208432834|gb|ACI27705.1| arginine decarboxylase [Helicobacter pylori G27] Length = 615 Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 90/314 (28%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + A K + LK +F + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ + +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKESNNPP 362 Score = 40.1 bits (92), Expect = 0.52, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|315586925|gb|ADU41306.1| arginine 2-monooxygenase [Helicobacter pylori 35A] Length = 615 Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 90/314 (28%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + +A K + LK +F + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPVTVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKENNNPP 362 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|15645050|ref|NP_207220.1| arginine decarboxylase [Helicobacter pylori 26695] gi|2313524|gb|AAD07486.1| arginine decarboxylase (speA) [Helicobacter pylori 26695] Length = 615 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 88/314 (28%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + +A K + LK +F + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ + +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKENNNPP 362 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|295136029|ref|YP_003586705.1| arginine decarboxylase [Zunongwangia profunda SM-A87] gi|294984044|gb|ADF54509.1| arginine decarboxylase [Zunongwangia profunda SM-A87] Length = 464 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 53/399 (13%), Positives = 112/399 (28%), Gaps = 65/399 (16%) Query: 13 KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLY--- 61 K+ +N++ KN K K + + + +SS + Sbjct: 52 KISDNINRAKGWFKAAMKNLDYKGTYNYCYCTKSSHFQYVMNEALKNDIHIETSSAFDIN 111 Query: 62 --EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + K + + +K + A I + + + + + Sbjct: 112 IVEKLKASGKLKDDAYVICNGFKRDQYVAN--IGRLINNGHKNCIPIIDNYEELSLLEDR 169 Query: 120 LR--INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCEN 169 + + + SRLG K+ + + N+ L F N Sbjct: 170 INDDFEVGIRIASEEEPKFEFYTSRLGIGYKNIVPFYNQSIKDNDKVNLKMLHFFINTGI 229 Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQ 216 + + L ++ +++GGG + + + Q Sbjct: 230 RDTAYYWNELNKCLKVYINLKRICPTLDSLNIGGGFPIKNSLAFDYDYQYMVEEIINQIQ 289 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLL 274 + ++ ++ E G V + +L + +++SS +PD Sbjct: 290 LACKEADVEVPNLFTEFGSFTVGESGGAIYEILYQKQQNDREKWNMINSSFITTLPDTWA 349 Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRIS 319 + A N ++ G +C + D +F +KP+ IG Sbjct: 350 ISKKFVMLAINRWNDEYERVLLGGLTCDSDDYYNSEQNTNAIYLPKFKKDKPLYIG---- 405 Query: 320 FEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353 F + Y F G I P + + D K Sbjct: 406 FFNTGAYQQTIG-GFGGLQHCLIPQPKHVLIDKDENGKI 443 >gi|317180168|dbj|BAJ57954.1| arginine decarboxylase [Helicobacter pylori F32] Length = 615 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 90/314 (28%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + +A K + LK +F + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKENNNPP 362 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDGKGDYEV 552 >gi|315929199|gb|EFV08421.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 311 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 70/227 (30%), Gaps = 30/227 (13%) Query: 12 QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63 +++ N RK G K + LK G L + G + S E+ Sbjct: 56 KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 115 Query: 64 MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114 +L +KD I A + + T+ +++L D A K Sbjct: 116 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 175 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 IGLR+ S I A S+ G + IE+ + + FH Sbjct: 176 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 234 Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY 209 + L I E ++ I+LGGG+ + Sbjct: 235 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQF 281 >gi|298242855|ref|ZP_06966662.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963] gi|297555909|gb|EFH89773.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963] Length = 370 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 55/209 (26%), Gaps = 11/209 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP L+D +L N+ A V+L +K + Q G T++ L Sbjct: 11 VDTPALLVDLARLEKNIRRYADSAAKARVRLRPHIKTHKTLEIAKMQLQAGAGGITAAKL 70 Query: 61 YEVMLGHEKFGGETHA-----YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + G E + + + + + A ++ Sbjct: 71 GEAE-VFAEAGIEDIFVAYPIIGPEKALRAARLAQHCRLIVGVESEKGVQQLSEAASQIG 129 Query: 116 KKIGLRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + +R+ + + R I G F + Sbjct: 130 STLLVRVEIDSGLGRTGVGQEAAGKLCRQVLDAPGLSLDGIFTFRGASFPEASSRDPQIL 189 Query: 175 FSAMLKNI---EKEFGHFITQIEWISLGG 200 + + + I+ IS+G Sbjct: 190 GRLEGEMMVAIAERLRRAGIPIQEISVGS 218 >gi|317009644|gb|ADU80224.1| arginine decarboxylase [Helicobacter pylori India7] Length = 615 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 90/314 (28%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + +A K + LK +F + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKENNNPP 362 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|207092618|ref|ZP_03240405.1| arginine decarboxylase [Helicobacter pylori HPKX_438_AG0C1] Length = 593 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + A K + LK +F + + +D Sbjct: 27 PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 86 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ + +KD E+ + + T+ +++L Sbjct: 87 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 146 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 147 IIAVAKQNDFVACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 206 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 207 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 266 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 267 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 326 Query: 257 N 257 N Sbjct: 327 N 327 Score = 40.1 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 393 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 452 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 453 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 512 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 513 THPTEFSVVFDEKGDYEV 530 >gi|300776464|ref|ZP_07086322.1| arginine decarboxylase [Chryseobacterium gleum ATCC 35910] gi|300501974|gb|EFK33114.1| arginine decarboxylase [Chryseobacterium gleum ATCC 35910] Length = 464 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 57/426 (13%), Positives = 116/426 (27%), Gaps = 68/426 (15%) Query: 3 KTPYYLIDKQKLLNNLDT----ALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMDG 54 TP + ++ N+ + K + + + Sbjct: 42 GTPLKISYLPRISQNIQKAKGWFKEAFEKTEYKKNYTYCYCTKSSHFNFVLEEALKNDIS 101 Query: 55 TTSSSLYEVMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCD-------TIIFNTVS 102 +SS Y++ + K +K + A +S+ T I + Sbjct: 102 IETSSAYDMDIVKSLYEKGKVDKNIEVICNGFKTDDYLAKISDMINSGFENITPILDNYR 161 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNG 160 +L+K + + IG+RI + + +E N + Sbjct: 162 ELDKLTE-SIDSTFDIGIRIASEEEPKFEFYTSRLGIGYKDIIPYYSQKIAEHPNARLKM 220 Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFT---DKDYPVKDF 214 L F N K + L + + +++ +++GGG + DY + Sbjct: 221 LHFFINTGIKDTAYYWNELYKCLRVYARLKKIAPEVDSLNIGGGFPIKTSLNFDYDYQYM 280 Query: 215 CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSV 265 + + +K+ IY E G V + ++ + + ++DSS Sbjct: 281 VEEIVSQIKKFCEEEGVEEPNIYTEFGSFTVGESGANLYKIISQKRQNDREKWNMIDSSF 340 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIF-----GEFHFEK------ 310 +PD + G +C + D + + Sbjct: 341 MTTLPDTWAISRHFIMLPLNRWEDTYERVFLGGLTCDSDDYYNSEQHTNAIYLPVFSDTK 400 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDG----TIKAIRE-FSYN 360 P+ IG F Y + G + P + D + RE Sbjct: 401 PLYIG----FFHTGAYQETIG-GYGGVHHCLMPQPRHVLIQKDENGELQYEIFREKQEPE 455 Query: 361 DYYNNL 366 D L Sbjct: 456 DVLKLL 461 >gi|332673834|gb|AEE70651.1| arginine 2-monooxygenase [Helicobacter pylori 83] Length = 615 Score = 53.6 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 88/301 (29%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + +A K + LK +F + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ + +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 N 257 N Sbjct: 349 N 349 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDGKGDYEV 552 >gi|307293936|ref|ZP_07573780.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1] gi|306880087|gb|EFN11304.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1] Length = 156 Score = 53.6 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 29/129 (22%), Gaps = 14/129 (10%) Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY--PNTGP 287 E G + +LD+ + H + + P Sbjct: 9 FECGRILTAYHAAYVCEILDLKFVHGRTFALLRGGTHHFRLPSSWGHNHPFLILPRDAWP 68 Query: 288 YTAM----------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336 + + G C D+ + +IGD F Y + + F Sbjct: 69 HPWPRPECRDINLTLAGELCTPKDVLARNVPVERARIGDLACFLMAGAYGWDISHHDFLC 128 Query: 337 INMPTIAVK 345 P Sbjct: 129 HPHPQHVYL 137 >gi|15612027|ref|NP_223679.1| arginine decarboxylase [Helicobacter pylori J99] gi|4155545|gb|AAD06541.1| arginine decarboxylase [Helicobacter pylori J99] Length = 615 Score = 53.6 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 35/314 (11%), Positives = 85/314 (27%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + A K + LK + + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKENNNPP 362 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLFYVKDHNDILRIQEQVQERYLLNWSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|254779590|ref|YP_003057696.1| arginine decarboxylase [Helicobacter pylori B38] gi|254001502|emb|CAX29520.1| Biosynthetic arginine decarboxylase(ADC) [Helicobacter pylori B38] Length = 615 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 90/314 (28%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + +A K + LK +F + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ + +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 ++ +I S + A S+ G + +E+ Sbjct: 169 IIAVTKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKENNNPP 362 Score = 40.1 bits (92), Expect = 0.51, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|150025756|ref|YP_001296582.1| arginine decarboxylase [Flavobacterium psychrophilum JIP02/86] gi|149772297|emb|CAL43775.1| Arginine decarboxylase [Flavobacterium psychrophilum JIP02/86] Length = 464 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 49/408 (12%), Positives = 109/408 (26%), Gaps = 63/408 (15%) Query: 3 KTPY-YLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMD 53 TP + ++ +N+ + + K + + + Sbjct: 42 GTPLKFTY-LPQISSNIKRAKAWFRNAMEKNNYEGKYYYCYCTKSSHFEYIMNEAFKNNI 100 Query: 54 GTTSSSLYEVMLG---HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 +SS +++ + + Y + + + I + + + Sbjct: 101 HIETSSAFDIDIVENLLQNGKINKSTYVICNGFKRDQYIENIARIINNGHKNTIPIIDNY 160 Query: 111 A--------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNG 160 K KIG+RI + + K E++ + Sbjct: 161 EELDLLQAEIKGKFKIGIRIAAEEEPKFEFYTSRLGIGYKNIVQFYRKQIQENDKLELKM 220 Query: 161 LMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDF 214 L F N + + ++ +++GGG + +Y + Sbjct: 221 LHFFINTGINDNAYYWNELVKCIKVYISLKKECPTLDGLNIGGGFPIKNSLTFEYDYQYM 280 Query: 215 CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSV 265 + + I+ E G V + +L + ++DSS Sbjct: 281 IDEIINQIKIACEEAEVDVPNIFTEFGSFTVGESGGAIYQILYQKQQNDREKWNMIDSSF 340 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEK 310 +PD + A N ++ G +C + D +++ EK Sbjct: 341 ITTLPDTWAINKRFIMLAINRWNDQYERVLLGGMTCDSDDYYNSEQNMNAIYLPKYNKEK 400 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353 P+ IG F + Y + G I P + + D Sbjct: 401 PLYIG----FFNTGAYQETIG-GYGGLHHCLIPQPKHILIDKDENGII 443 >gi|1620470|emb|CAA65422.1| arginine decarboxylase [Synechocystis sp. PCC 6803] Length = 302 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 60/206 (29%), Gaps = 38/206 (18%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM---- 52 P + L + L+ A + + +KC + + L ++ Sbjct: 79 PLLIRFSDILADRLERLNSCFAKAIARYNYPNTYQAVYPVKCNQQRHLVEALVRFGQTSQ 138 Query: 53 DGTTSSSLYEVMLGHEKFGG---------ETHAYNVAYKDCEIDAVL------SNCDTII 97 G + S E+M+ + YKD + + II Sbjct: 139 CGLEAGSKPELMIALATLPPPLDRQDKHTKPLIICNGYKDQDYLETALLAKRLGHRPIII 198 Query: 98 FNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKF---ILADPNRPFSRLGEKCKDKIESE 154 + +L +Q+L+ K L + +S ++ N ++LG D + Sbjct: 199 IEQLRELEWVLHISQQLNIKPMLGVRARLSCQSLKSSEISSGNGDRAKLGLTMPDIVTVI 258 Query: 155 IK--------NVNGLMFHNNCENKSF 172 + + L FH + Sbjct: 259 HRLEENNCLDCLKMLHFHLGTQVSDI 284 >gi|332881893|ref|ZP_08449535.1| Pyridoxal-dependent decarboxylase, sheet domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680128|gb|EGJ53083.1| Pyridoxal-dependent decarboxylase, sheet domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 463 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 50/396 (12%), Positives = 103/396 (26%), Gaps = 59/396 (14%) Query: 13 KLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 K+ N+ A + A K + + +SS +++ Sbjct: 52 KISENIQRAKKWFEKAIKKHKYKGEYNYCYCTKSSHFKHVMVEALKNDIHMETSSAFDIN 111 Query: 65 ----LGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQK 113 L E E+H +K + I + ++ K Sbjct: 112 IINNLISEGLINKESHILCNGFKRDAYIDGIADLINRGYHNCIPIIDNYEEINLFEEKIK 171 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPF--SRLGEKCKDKIESEIKNVNGLMFHNNCENK- 170 IG+RI + L ++ ++ + L F N K Sbjct: 172 DKYSIGIRIASEEDPRSEFYTSRLGIGYKNILPFYNREIKDNPKVRLKMLHFFINTGIKD 231 Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225 + + + +++ +++GGG +Y + + Sbjct: 232 NAYYWNELLKCLRVYIQLKKVAPELDSLNIGGGFPIKSSLAFEYDYAYMVDEIIRQIKIT 291 Query: 226 S-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276 I+ E G V ++ + +++SS +PD Sbjct: 292 CDQEKVPVPNIFTEFGSFTVGEAGGAIYEIMYQKQQNDREKWDMINSSFITTLPDSWAIN 351 Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321 + N ++ G +C D +++ KP+ IG F Sbjct: 352 KRFVLLPINRWNDEYERVLLGGLTCDGDDYYNSEQNMNAIYLPKYNKNKPLYIG----FF 407 Query: 322 DVAGY----NINRKNWFNGINMPTIAVKNVDGTIKA 353 + Y I P I + + D K Sbjct: 408 NTGAYQDSIGGVGGLQHCLIPQPKIVLIDKDKDGKI 443 >gi|118474532|ref|YP_892067.1| arginine decarboxylase [Campylobacter fetus subsp. fetus 82-40] gi|118413758|gb|ABK82178.1| arginine decarboxylase [Campylobacter fetus subsp. fetus 82-40] Length = 613 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 87/290 (30%), Gaps = 45/290 (15%) Query: 11 KQKLLNNLDTALYI---RKNAG-VKLLLALKCFAAWGMFDTLNQ----YMDGTTSSSLYE 62 K++++ + + +G + LK G + L + Y G + S E Sbjct: 57 KKQIVQVYSSFDRAKKEFEYSGSFNAVYPLKVNQYPGFVENLVKLGESYGYGLEAGSKAE 116 Query: 63 VMLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QK 113 ++L +KD I A + + T+ +++L A Sbjct: 117 LLLAMAYNNYGAPITVNGFKDKELIDIGFIAAEMGHNITLTIEGLNELEAIIATAKERFT 176 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHN 165 IGLRI S + A S+ G + IE+ I+ + FH Sbjct: 177 PKPSIGLRIRL-HSSGTGVWAKSGGINSKFGLTSTELIEAVNLLKDNELIEQFTMIHFHI 235 Query: 166 NCENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDY------------ 209 + L + ++ I+LGGG+ + Sbjct: 236 GSQINEIHPLKKALVEAGNIYAELRKMGASNLKAINLGGGLAIEYSQFKEHPSRNYTLKE 295 Query: 210 ---PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + + I++E G I N L VL++ Sbjct: 296 YANDVVYLLKTIANQKNEIEPDIFIESGRYIAANHAVLVAPVLELFSQEY 345 >gi|228065909|gb|ACP56699.1| arginine decarboxylase [Lithospermum erythrorhizon] Length = 708 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 60/196 (30%), Gaps = 32/196 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ + +A + + +KC + + + Q+ Sbjct: 102 PMIVRFPDVLKNRLESLQFAFDSAILAQGYGGHYQGVYPVKCNQDRYIVEDIVQFGSSFR 161 Query: 54 -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L E+ +KD E A+ I+ + Sbjct: 162 FGLEAGSKPELLLAMSCLCKGSPESLLICNGFKDAEYIALACVARKLLLNTVIVLEQEEE 221 Query: 104 LNKFKDKAQK--LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 L+ D ++K + IGLR +S + + G + Sbjct: 222 LDLVIDISRKISVIPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTAQILRVVKKLEQAG 280 Query: 156 --KNVNGLMFHNNCEN 169 + L FH + Sbjct: 281 MLDCLQLLHFHIGSQI 296 >gi|307246498|ref|ZP_07528570.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306852561|gb|EFM84794.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 131 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 5/105 (4%) Query: 48 LNQYMDGTTSSSLYEVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQL 104 + + G S E+ ++ K A+ ++++L Sbjct: 1 MARLGSGFDIVSQGELERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAEL 60 Query: 105 NKFKDKAQKLHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKC 147 ++ + A +L K I LR+NP V ++ G Sbjct: 61 HRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSV 105 >gi|291276448|ref|YP_003516220.1| biosynthetic arginine decarboxylase [Helicobacter mustelae 12198] gi|290963642|emb|CBG39474.1| biosynthetic arginine decarboxylase [Helicobacter mustelae 12198] Length = 614 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 32/277 (11%), Positives = 80/277 (28%), Gaps = 39/277 (14%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWG-MFDTLNQYMD---GTTSSSLYEVMLGHEKFGGET 74 + + LK + + ++ G + S E+++ Sbjct: 68 KAMREYKYEGHFHAVFPLKVNQMPNFVLPLMKSSLNRSYGLEAGSKSELIIAMAYTNKHA 127 Query: 75 HAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSV 126 +KD E+ A + + T+ +++L A+++ Sbjct: 128 PITVNGFKDKEMIHLGFIAANMGHSITLTIEGLNELETIIAVAKEMGEPYPDIGLRIRLH 187 Query: 127 SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNNCENKSFLCFSAM 178 S + A S+ G + +E+ + + FH + Sbjct: 188 STGTGVWAKSGGIHSKFGLTSTELLEAISLLEKSKLLHKFRMIHFHIGSQISDISPLKKA 247 Query: 179 LKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQR---------------LK 219 ++ + + ++ +++GGG+ + + C + Sbjct: 248 IREVGNIYAELRKMGAKKLTAVNIGGGLAVEYTQHQGCNNCNYTLSEFSGDVVFSLKEIV 307 Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + ++ IY+E G I N L VL++ Sbjct: 308 KNKKEKEPDIYIESGRYISANHAVLVAPVLELFSQEY 344 >gi|149371929|ref|ZP_01891248.1| arginine decarboxylase, biosynthetic [unidentified eubacterium SCB49] gi|149355069|gb|EDM43630.1| arginine decarboxylase, biosynthetic [unidentified eubacterium SCB49] Length = 463 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 49/394 (12%), Positives = 107/394 (27%), Gaps = 61/394 (15%) Query: 13 KLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY--- 61 K+ N+ A +N+ K + + +SS + Sbjct: 52 KISENIQRAKQWFENSIKAQNYKGSYNYCYCTKSSHFKHVLHEATKNDIHIETSSAFDIN 111 Query: 62 --EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ----LNKFKDKAQKLH 115 E + K +T +K + ++ + ++ + Sbjct: 112 IIENLKAEGKITDKTFVICNGFKREQYITNITRLINDGQENCIPIIDNYEELDLLSEGIK 171 Query: 116 KKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENK- 170 + I + +R + + +E + L F N + Sbjct: 172 GDFKVGIRIASEEEPKFEFYTSRLGIGYKNIVPFYENQIKNNEKVELKMLHFFINTGMRD 231 Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHF-------TDKDYPVKDFCQRLKEF 221 + + ++ +++GGG D Y V + ++K Sbjct: 232 NAYYWNELLKCLKVYTRLKKICPTLDSLNIGGGFPIKNSLAFEYDYQYMVDEIINQIKIT 291 Query: 222 SEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276 E+ I+ E G V + +L + +++SS +PD Sbjct: 292 CEEEGVSVPHIFTEFGSFTVGESGGAIYEILYQKQQNDREKWNMINSSFITTLPDTWAIS 351 Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321 + A N ++ G +C + D + E+P+ IG F Sbjct: 352 KRFIMMAINRWNDTYERVLLGGLTCDSDDYYNSEQNMNAIYLPRYKKEQPLYIG----FF 407 Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350 + Y + F G + P + + D Sbjct: 408 NTGAYQESIG-GFGGLQHCLVPSPKHILIDKDKD 440 >gi|157165425|ref|YP_001466860.1| arginine decarboxylase [Campylobacter concisus 13826] gi|112801270|gb|EAT98614.1| arginine decarboxylase [Campylobacter concisus 13826] Length = 611 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 88/300 (29%), Gaps = 49/300 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLL--------ALKCFAAWGMFDTLNQYM---- 52 P L + ++ A + LK G L + Sbjct: 46 PLLLRFPHLIQKQIEQIHASFAKAKKEFAYKGSFNAVFPLKVNQYPGFVKNLVRLGKPYN 105 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106 G + S E++L + +KD E+ A + + T+ +++L Sbjct: 106 YGLEAGSKAELLLTMAYNNDKAPITVNGFKDKEMINIGFIAAEMGHNITLTIEGLNELEA 165 Query: 107 FKDKA---QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------- 156 A K KIGLRI S + A S+ G + IE+ Sbjct: 166 IIAIAKERFKPKPKIGLRIRL-HSTGSGLWAKSGGIHSKFGLTSTELIEAVKMLKKANLL 224 Query: 157 -NVNGLMFHNNCENKSFLCFS---AMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDY-- 209 N + FH + NI E ++ I+LGGG+ + Sbjct: 225 ENFTMIHFHIGSQISEIHPLKKALIEAGNIYAELRKMGATNLKAINLGGGLAIEYSQFKE 284 Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + E ++ I++E G I + L VL++ Sbjct: 285 ESSRNYTLNEYANDVVYMLKTISEQKKEIEPDIFIESGRYIAASHALLVAPVLELFSQEY 344 >gi|148906158|gb|ABR16236.1| unknown [Picea sitchensis] Length = 479 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 28/258 (10%), Positives = 74/258 (28%), Gaps = 33/258 (12%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 +L+ + A + + +KC + + ++ G S Sbjct: 132 DIVLHRIQKLQECFDMAISRYGYQQSFQGVFPIKCNHDSFLIKDIIEFGHQFKFGLEVGS 191 Query: 60 LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVL------SNCDTIIFNTVSQLNKFKDKA 111 E+++ K + YKD ++ + +L+ + Sbjct: 192 KPELLIAVSKLCCNKDALLICNGYKDSVYIESALLAMQLGIKVVLVLEQMEELDLVIKTS 251 Query: 112 QKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLM 162 +KL + + +S A+ + + G I+ + + L Sbjct: 252 RKLKVLPIIGLRAKLSTKHDGHWAETSGDSGKFGLSVSKLIQVVHRLKKENMLQCLQLLH 311 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219 FH + S ++ + ++ +I +GGG+ + Sbjct: 312 FHIGSQIPSISTMKEAMREGSHIYCELVLMGARMHYIDVGGGLGIDYDGTGDPSNAS-IS 370 Query: 220 EFSEKYSVQIYLEPGEAI 237 + Y+ ++ + +A Sbjct: 371 YSMQCYANEVVVALRDAC 388 >gi|325286965|ref|YP_004262755.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Cellulophaga lytica DSM 7489] gi|324322419|gb|ADY29884.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Cellulophaga lytica DSM 7489] Length = 467 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 48/408 (11%), Positives = 108/408 (26%), Gaps = 63/408 (15%) Query: 3 KTPY-YLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD 53 +P + K+ +N+ A A K + Sbjct: 42 GSPLKFTY-LPKISDNISRAKNWFAIAMEKYQYKGKYHYCYCTKSSHFKPVLHEALNNNI 100 Query: 54 GTTSSS---LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ------L 104 +SS + V ++ + Y + + + I + Sbjct: 101 HIETSSAFDINIVEHLKQEGKIKDDTYVICNGFKRDQYITNIARLINEGHRNCIPIIDNY 160 Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNG 160 + + ++++ + I + +R + + +++ + Sbjct: 161 EEIDLLSNEINEDFKVGIRIASEEEPKFEFYTSRLGIGYKNIVPFYENQIRDNDKVQLKM 220 Query: 161 LMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDF 214 L F N K + + + ++ +++GGG + DY + Sbjct: 221 LHFFINTGIKDNAYYWNELLKCLKVYVKLKKICPSLDSLNIGGGFPIKNSLVFDYDYQYM 280 Query: 215 CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSV 265 + + I+ E G V +L + ++DSS Sbjct: 281 IDEIINQIKLTCDEAGVDVPNIFTEFGSFTVGEAGGAIYEILYQKQQNDREKWNMIDSSF 340 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEK 310 +PD + N ++ G +C + D ++ K Sbjct: 341 ITTLPDTWAINKRFIMLPINRWNDEYERVLLGGLTCDSDDYYNSEQHTNAIYLPKYKKNK 400 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353 P+ IG F + Y + + G I P + N D K Sbjct: 401 PLYIG----FFNTGAYQESIG-GYGGLQHCLIPQPKHILINKDAEGKI 443 >gi|86140070|ref|ZP_01058633.1| arginine decarboxylase [Roseobacter sp. MED193] gi|85823165|gb|EAQ43377.1| arginine decarboxylase [Roseobacter sp. MED193] Length = 629 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 31/303 (10%), Positives = 76/303 (25%), Gaps = 44/303 (14%) Query: 11 KQKLLNNLDTALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMD----GTTSSSLYE 62 + ++ + + + G K + +K + D + ++ G + S E Sbjct: 70 ENEIRHINQSFANAIQRVGYKAPYRGVFPIKVNQQAQVIDRIVEFGSKYDFGLEAGSKPE 129 Query: 63 VMLGHEK--FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 +++ N I L I+ + + + ++L Sbjct: 130 LVIALAHRLAKDALIVCNGVKDAEFIRLAILSRRLGFNTIIVLESPKEAETVIEVTRELG 189 Query: 116 KKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166 + L + + + + S G + + H Sbjct: 190 IEPLLGVRVKLTNQIGGKWQESSGDRSAFGMNSDQLLRVVDRLKDVGLLHCLRLQHSHLG 249 Query: 167 CENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY-------------- 209 + + F + + LGGG+ Sbjct: 250 SQVPDVNDVRRATAEACRYFIELTREGVPLTHLDLGGGLGIDYTGEKRAAENSINYSIEE 309 Query: 210 ---PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE 266 V + + +E + E G A+V ++ L VL+ + + Sbjct: 310 YASNVVETVAYAMDDAEVAHPVLVTESGRAVVATSSMLIFDVLETTLYDAPDAPDVQPED 369 Query: 267 AHV 269 H+ Sbjct: 370 HHL 372 >gi|261251833|ref|ZP_05944407.1| biosynthetic arginine decarboxylase [Vibrio orientalis CIP 102891] gi|260938706|gb|EEX94694.1| biosynthetic arginine decarboxylase [Vibrio orientalis CIP 102891] Length = 636 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 70/270 (25%), Gaps = 35/270 (12%) Query: 5 PYYLIDKQKLLNN----LDTALYIRKN----AGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + L+ +K + D + + Sbjct: 61 PVLVRFPQILHQRVHGICQAFNQAIEEYQYQNNYLLVYPIKVNQQKEVVDEILESQAQLE 120 Query: 54 ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N + L + I+ +S Sbjct: 121 TKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L I ++ + + G + E Sbjct: 181 ELDLVLKEAKSLGVKPRLGIRIRLASQGAGKWQSSGGEKSKFGLSASQVLTVIERLKQEE 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 ++ + + FH + + E I++ +GGG+ Sbjct: 241 QLDAMQLVHFHLGSQMANIRDIRNGVNESARFYCELREMGADIKYFDIGGGLAVDYDG-T 299 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+ Sbjct: 300 RSQSSNSMNYGLIEYARNIVSTVGDVCQQY 329 >gi|124024772|ref|YP_001013888.1| arginine decarboxylase [Prochlorococcus marinus str. NATL1A] gi|123959840|gb|ABM74623.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str. NATL1A] Length = 647 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 86/294 (29%), Gaps = 48/294 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + L + L + A + + +KC + + L +++ Sbjct: 68 PLLIRFDDILEDCLKNLHKAFEKAINDYQYEGKYQGVFPIKCNQQRHVVEELITCGSKWN 127 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105 G + S E+++G + YKD ++ + + Sbjct: 128 FGLEAGSKPELLIGLSILENPKALLICNGYKDQRYIETAILARQLGRQPIVVIEQANDVE 187 Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIE--------SEIK 156 + L + I S S + S+ G + ++ + + Sbjct: 188 LIIKSSDLLGASPLIGIRAKLSSQSSGRWSSSIGDKSKFGLSIPEILKTIKRLKEANLLN 247 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------ 207 + L FH + L+ + + + ++ +GGG+ Sbjct: 248 ELKLLHFHLGSQINDIGVLKDALQEAGQIYAELINLGAPMGYLDVGGGLGIDYDGSQTAS 307 Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD 250 +Y ++++ + ++ + E G AI ++ + L +L Sbjct: 308 IASTNYSLQNYANDVVATIKECCESKKIPLPTLITESGRAIASHFSILIFNILG 361 >gi|319953364|ref|YP_004164631.1| orn/dap/arg decarboxylase 2, c-terminal protein [Cellulophaga algicola DSM 14237] gi|319422024|gb|ADV49133.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Cellulophaga algicola DSM 14237] Length = 466 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 46/397 (11%), Positives = 106/397 (26%), Gaps = 61/397 (15%) Query: 13 KLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 K+ N++ A K A K + + + +SS Y++ Sbjct: 52 KISENINRAKAWFKIAMEKNDYKGKYHYCYCTKSSHFQPVLNEVLNNDVHIETSSAYDIN 111 Query: 65 LGHEKFGGETH---AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--------AQK 113 + + Y + + + + I + + + Sbjct: 112 IVEKLKKKGKIKDDTYVICNGFKRDEYIDNIGRLINEGHRNCIPIIDNYEEIDLLSDVIG 171 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPF--SRLGEKCKDKIESEIKNVNGLMFHNNCENK- 170 K+G+RI + + +++ + L F N + Sbjct: 172 DTFKVGIRIASEEEPKFEFYTSRLGIGYKNIVPFYENQIKDNDKVELKMLHFFINTGIRD 231 Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRL 218 + + ++ +++GGG + + + Sbjct: 232 NAYYWNELVKCLKVYIRLKKMCPSLDSLNIGGGFPIKNSLAFDYDYQYMIDEIINQINIA 291 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276 + +E I+ E G V + +L + ++DSS +PD Sbjct: 292 CQEAEVPVPHIFTEFGSFTVGESGGAIYEILYQKQQNDREKWNMIDSSFITTLPDTWAIN 351 Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEKPVKIGDRISFE 321 + ++ G +C + D ++ +KP+ IG F Sbjct: 352 KRFVMLPINRWQDEYERVLLGGLTCDSDDYYNSEQNMNAIYLPKYRRDKPLFIG----FF 407 Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353 + Y + + G I P + + D K Sbjct: 408 NTGAYQESIG-GYGGLQHCLIPQPKHILIDRDENGKL 443 >gi|87311553|ref|ZP_01093671.1| arginine decarboxylase [Blastopirellula marina DSM 3645] gi|87285675|gb|EAQ77591.1| arginine decarboxylase [Blastopirellula marina DSM 3645] Length = 637 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 41/334 (12%), Positives = 90/334 (26%), Gaps = 47/334 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTL----NQYM 52 P + L L + + +K + + + Q+ Sbjct: 65 PILIRFSGILETRLQEIRDVFDVAIREYGYQNKYACVYPIKVNQQRQVVEEVLQYGRQHG 124 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 G + S E++ +T +KD E + + + N + + K+ + Sbjct: 125 FGLEAGSKPELLAVIALTDNDTPIICNGFKDAEYIEIAMHALKLGRNIIPVVEKYSELEL 184 Query: 113 KLHKKIGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKIESE--------IKN 157 L + + P + + S+ G + ++ Sbjct: 185 ILEYSAKIGVRPQIGMRVKLASRGAGKWSASGGYRSKFGLTVTEVLKGLEELKSRGMEDC 244 Query: 158 VNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------- 207 L +H + + I + + ++ +GGG+ Sbjct: 245 FKLLHYHQGSQVSNIRHVKSALVESARIYVDLVRRGAGLCYLDVGGGLGVDYDGSQTDFE 304 Query: 208 ----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 V Q + + + + E G AIV + L VL ++E Sbjct: 305 SSMNYTIEEYARDVVSHVQGICDAAGVAHPHLLSESGRAIVAFHSMLIFEVLGVAEQTTG 364 Query: 258 LVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291 I +A P LY+ ++ T + Sbjct: 365 DEIEPVPDDAPSPLRELYEAYQSVTQRTVLESFH 398 >gi|313682358|ref|YP_004060096.1| arginine decarboxylase [Sulfuricurvum kujiense DSM 16994] gi|313155218|gb|ADR33896.1| arginine decarboxylase [Sulfuricurvum kujiense DSM 16994] Length = 609 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 89/287 (31%), Gaps = 42/287 (14%) Query: 12 QKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLG 66 L +N A++ G + LK D + + + G + S E+ L Sbjct: 60 DALYSNFRRAIFENDYTGKFHAVFPLKVNQFPEAVDAIVELGEKYSYGLEAGSKAELALA 119 Query: 67 HEKFG-GETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKL---HKK 117 K G N + + A + + TI + +L D AQ Sbjct: 120 MAKTAIGAPITVNGFKDEEMVTLGFMAAQMGHNITITIEGLGELEWIIDVAQSCGLKVPN 179 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCEN 169 IG+R+ S I A + ++ G + IE+ + + + + FH + Sbjct: 180 IGIRVRL-QSEGSGIWAKSSGMSAKFGLTSTELIEAMLMLQENNMLEHFSMIHFHIGSQM 238 Query: 170 KSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQR-------- 217 + +L+ + ++ I++GGG+ + Sbjct: 239 QDIAPLKRVLREAGNIYAELKKMGADNLKAINIGGGLAVEYSQHTSTRMRNYTLEEFSNS 298 Query: 218 -------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 + I+ E G IV + + L VL++ + Sbjct: 299 VVFLLREIMNAKGVAHPDIFTESGRFIVASHSVLIAPVLELFSHDYQ 345 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 4/47 (8%) Query: 317 RISFEDVAGYNINRKNWFNGINMPTI--AVKNVDGTIKAIREFSYND 361 ++F +V Y N P+ + N G I F+ +D Sbjct: 509 FLAFFNVGAYQETLGMNHNLFTHPSECTIIINDTGYE--IENFTESD 553 >gi|307721017|ref|YP_003892157.1| arginine decarboxylase [Sulfurimonas autotrophica DSM 16294] gi|306979110|gb|ADN09145.1| arginine decarboxylase [Sulfurimonas autotrophica DSM 16294] Length = 609 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 85/296 (28%), Gaps = 49/296 (16%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTS 57 IKT Y ++ + N + LK + + G + Sbjct: 59 IKT-LYNYFEKAIEEN--NYKGSFNA-----VFPLKVNQFPAAVEAITSQGAKYNYGLEA 110 Query: 58 SSLYEVMLGHEK-FGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKA 111 S E++L K G N + I A + T+ +++L + A Sbjct: 111 GSKAELILAMSKTLDGANITVNGFKDEEMLTLGFIAAQSGHNITVTIEGLNELETIIEVA 170 Query: 112 QKLH---KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNG 160 + IG+R+ S I A ++ G + IE+ I+ + Sbjct: 171 AQCSLKVPNIGIRVRL-HSAGSGIWAKSGGMDAKFGLTSTEIIEAVNLLKDAGLIQQLKM 229 Query: 161 LMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQ 216 + FH + NI E + + I++GGG+ + Sbjct: 230 IHFHIGSQMADIAPLKKALREAGNIYAELKKMGAESLSSINIGGGLAVEYDQHEQSHARN 289 Query: 217 R---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 + I+ E G IV + L T VL++ Sbjct: 290 YSIDEFSSSVVFLLGEIMNAKNVAHPDIFTESGRFIVASHAVLITPVLELFTQDYQ 345 Score = 37.4 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 27/89 (30%), Gaps = 12/89 (13%) Query: 269 VPDYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIFG----EFHFEKPVKIGD--- 316 +PDY + + P T A + +C + G + + V I + Sbjct: 449 LPDYWGLGQHFPVMPIHHLNTTPLRAASLWDITCDSDGEIGFNPEKPLYLHDVNIDEEDY 508 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVK 345 ++F +V Y N P Sbjct: 509 FLAFFNVGAYQETLGMDHNLFTHPNEYTI 537 >gi|224436999|ref|ZP_03657980.1| arginine decarboxylase [Helicobacter cinaedi CCUG 18818] gi|313143471|ref|ZP_07805664.1| arginine decarboxylase [Helicobacter cinaedi CCUG 18818] gi|313128502|gb|EFR46119.1| arginine decarboxylase [Helicobacter cinaedi CCUG 18818] Length = 616 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 91/300 (30%), Gaps = 49/300 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLNQYMD-- 53 P L + N +D + A K + LK + + Q D Sbjct: 46 PLLLRFPHLIKNQVDKVFKAFEGAIKEYSYKGKFKAVFPLKVNQMPNFVLPLVEQSQDKC 105 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106 G + S E++L + +KD E+ A + + T+ +++L Sbjct: 106 YGLEAGSKSELILAMAYTNKNSPITVNGFKDKEMISLGFSAANMGHDITLTIEGLNELET 165 Query: 107 FKDKAQ---KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EI 155 + A + + IGLRI S I A S+ G + +E+ + Sbjct: 166 IIEVAHELGEPYPNIGLRIRL-HSTGVGIWAKSGGINSKFGLTSTELLEAIKMLEKEQLL 224 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-- 209 + FH + + ++ +++GGG+ + Sbjct: 225 HKFTMIHFHIGSQISDISPLKKAIREAGNIYAELRKKGAKNLQCVNIGGGLAVEYTQHEG 284 Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + + ++ I++E G I + L VL++ Sbjct: 285 KNNRNYTLSEFSGDVVFSLREIAKNKKEPEPDIFIESGRFIAASHAVLVAPVLELFSQEY 344 >gi|3421202|gb|AAC68531.1| arginine decarboxylase [Sisymbrium altissimum] Length = 403 Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 74/245 (30%), Gaps = 28/245 (11%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEKF---GGETHAYNVAYK 82 + + +KC + + + ++ G + S E++L F E +K Sbjct: 1 YQGVYPVKCNQDRFIIEDIVRFGSSFGFGLEAGSKPEILLAMSCFCKGNPEAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E + I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DSEYVSFALLGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTIQILRVVRNLRQLGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + + + + Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYA-EAVVASVRFVCDQKSV 238 Query: 244 LNTTV 248 + + Sbjct: 239 KHPVI 243 >gi|3421206|gb|AAC68532.1| arginine decarboxylase [Stanleya pinnata] Length = 403 Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 74/245 (30%), Gaps = 28/245 (11%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEKF---GGETHAYNVAYK 82 + + +KC + + + ++ G + S E++L F E +K Sbjct: 1 YQGVYPVKCNQDRFIIEDIVRFGSSFGFGLEAGSKPEILLAMSCFCKGNPEAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E + I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DSEYVSFALLGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTIQILRVVRNLRQLGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + + + + Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYA-EAVVASVRFVCDQKSV 238 Query: 244 LNTTV 248 + + Sbjct: 239 KHPVI 243 >gi|149194437|ref|ZP_01871534.1| arginine decarboxylase [Caminibacter mediatlanticus TB-2] gi|149135612|gb|EDM24091.1| arginine decarboxylase [Caminibacter mediatlanticus TB-2] Length = 608 Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 99/353 (28%), Gaps = 55/353 (15%) Query: 14 LLNNLDTALYIRKNA--------GVKLLLALKCFAAW----GMFDTLNQYMDGTTSSSLY 61 + +++ A + LK + N++ G + S Sbjct: 54 IRKQINSLYSAFNKAIKEFNYKGKFHAVFPLKVNQFPTFVKPLIKIANKFNYGLEAGSKA 113 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---------AQ 112 E++L +KD ++ + + ++ + + + Sbjct: 114 ELILAMAYNNKNAPITINGFKDKDMIRLAFIAGFMGYDVTITIEGLNELNSIIEVSKEYE 173 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFH 164 K+ IG+RI S I A S+ G + IE+ + + FH Sbjct: 174 KIPVNIGIRIRLHTSGVG-IWAKSGGIESKFGLSSTEIIEAIDILKKEKMLDKLKMIHFH 232 Query: 165 NNCENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY----------- 209 + ++ I + + I++GGG+ + Sbjct: 233 IGSQINDISPLKKAIRESGNIYADLRKMGAKNLSAINIGGGLAIEYSQWEEKRDKNYSIE 292 Query: 210 ----PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265 V + + + E I+ E G I + +T L V+++ + + Sbjct: 293 EFSNDVVYLLKEISQKKEVPMPDIFTESGRFIASPSTILIAPVIELFSQEYHEKNLKLKD 352 Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 + PD + N Y A D F + I D I Sbjct: 353 KN--PDLVEELYDLYKTINENNYIEYFH----DALDHFESLLTLFDLGIIDLI 399 >gi|195996327|ref|XP_002108032.1| hypothetical protein TRIADDRAFT_52094 [Trichoplax adhaerens] gi|190588808|gb|EDV28830.1| hypothetical protein TRIADDRAFT_52094 [Trichoplax adhaerens] Length = 470 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 16/81 (19%), Gaps = 7/81 (8%) Query: 272 YLLYQESATIYPNTGPYTA--MVCGRSCLAGDIFGEFHFEKP---VKIGDRI--SFEDVA 324 + + G + D + I D + ++ Sbjct: 348 MSYGCRYPKVNGKKSKKLYSTCLWGPTVSGSDCIFHECYLPEERDCAIKDILWTILIEMG 407 Query: 325 GYNINRKNWFNGINMPTIAVK 345 Y FNG P Sbjct: 408 AYTSVLATNFNGFTRPVSYYV 428 >gi|3421190|gb|AAC68528.1| arginine decarboxylase [Brassica oleracea] Length = 401 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 73/245 (29%), Gaps = 28/245 (11%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEKF---GGETHAYNVAYK 82 + + +KC + + + ++ G + S E++L F E +K Sbjct: 1 YQGVYPVKCNQDRFIIEDIVRFGSSFRFGLEAGSKPEILLAMSCFCKGNPEAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E + I+ +L+ D + K++ + GLR +S + Sbjct: 61 DSEYVSFALLGRKLELNTVIVLEQEEELDLVIDLSPKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTIQILRVVRNLRQLGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + + + + Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYA-EAVVASVRFVCDQKSV 238 Query: 244 LNTTV 248 + + Sbjct: 239 KHPVI 243 >gi|78355618|ref|YP_387067.1| arginine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218023|gb|ABB37372.1| arginine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 650 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 78/289 (26%), Gaps = 48/289 (16%) Query: 11 KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58 + L + + +NA G + + +K + + + Y G Sbjct: 83 ENILESRISLLHKSFRNAIESLGYQGGYRGVFPIKVNQQQQVIEKIATYGSMYHHGLEVG 142 Query: 59 SLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKA 111 S E++ + E YKD E + + + +L ++ Sbjct: 143 SKAELIAAISQAQDKEACIVCNGYKDEEFIDLGLHAVRMGFKCFFVLEMPRELELILRRS 202 Query: 112 QKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLM 162 Q++ + + S + +D S G E + L Sbjct: 203 QQMGVRPLIGTRVKLASKAGGHWSDSGGELSTFGLTTAQIMDVVDRLQKEDMLDCFRLLH 262 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207 +H + + + + ++ LGGG+ Sbjct: 263 YHLGSQVPNIRDIRSAVMEATRVYAGLVSEGAAMGYLDLGGGLAVDYDGSHTNFVSSRNY 322 Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251 D D + + ++ I E G A V + L +LD+ Sbjct: 323 TQDEYCTDIVEAVMSILDETGVPHPHIITESGRATVAYYSMLLFNILDV 371 >gi|217034353|ref|ZP_03439769.1| hypothetical protein HP9810_491g46 [Helicobacter pylori 98-10] gi|216943238|gb|EEC22705.1| hypothetical protein HP9810_491g46 [Helicobacter pylori 98-10] Length = 615 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 88/301 (29%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + +A K + LK +F + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L T VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVTPVLELFSHEY 348 Query: 257 N 257 N Sbjct: 349 N 349 Score = 40.1 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PD+ +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDHWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|317014418|gb|ADU81854.1| arginine decarboxylase [Helicobacter pylori Gambia94/24] Length = 615 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 82/301 (27%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + A K + LK + + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 N 257 N Sbjct: 349 N 349 Score = 39.4 bits (90), Expect = 0.98, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLKQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|261839769|gb|ACX99534.1| arginine decarboxylase [Helicobacter pylori 52] Length = 615 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 87/314 (27%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + +A K + LK +F + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKENNNPP 362 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|217032299|ref|ZP_03437796.1| hypothetical protein HPB128_142g47 [Helicobacter pylori B128] gi|298735968|ref|YP_003728493.1| arginine decarboxylase [Helicobacter pylori B8] gi|216946065|gb|EEC24678.1| hypothetical protein HPB128_142g47 [Helicobacter pylori B128] gi|298355157|emb|CBI66029.1| arginine decarboxylase [Helicobacter pylori B8] Length = 615 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 88/314 (28%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + +A K + LK +F + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ + +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKESNNPP 362 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|261838368|gb|ACX98134.1| arginine decarboxylase [Helicobacter pylori 51] Length = 615 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + +A K + LK +F + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 N 257 N Sbjct: 349 N 349 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PD+ +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDHWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|317182285|dbj|BAJ60069.1| arginine decarboxylase [Helicobacter pylori F57] Length = 615 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + +A K + LK +F + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 N 257 N Sbjct: 349 N 349 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|317177783|dbj|BAJ55572.1| arginine decarboxylase [Helicobacter pylori F16] Length = 615 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + +A K + LK +F + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 N 257 N Sbjct: 349 N 349 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|308183138|ref|YP_003927265.1| arginine decarboxylase [Helicobacter pylori PeCan4] gi|308065323|gb|ADO07215.1| arginine decarboxylase [Helicobacter pylori PeCan4] Length = 615 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 87/301 (28%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53 P + + + + +A K + LK +F + + +D Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ + +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 ++ +I S + A S+ G + +E+ Sbjct: 169 IIAVTKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 N 257 N Sbjct: 349 N 349 Score = 40.5 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + + + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|114332153|ref|YP_748375.1| arginine decarboxylase [Nitrosomonas eutropha C91] gi|114309167|gb|ABI60410.1| arginine decarboxylase [Nitrosomonas eutropha C91] Length = 652 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 86/295 (29%), Gaps = 44/295 (14%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYM----DGTTSSS 59 +I ++ T +G + + +K + + + G S Sbjct: 75 VIS-SRVRRLNQTFRKAIHESGYEGTYRSIYPIKVNQLQEVVAEVLEAGQEFNIGLECGS 133 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLNKFKDKAQK 113 E++ ET KD + ++ N I I S+ + + A+ Sbjct: 134 KAELLAMLPLVADETLLLCNGVKDRTMLTLMLNAQQIGQQVMPIIEKYSEFEQLMNLAEA 193 Query: 114 LHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFH 164 K L + ++ + S+ G + ++ + L FH Sbjct: 194 RQMKPRLGVRLKLNTKGSGRWFESGGANSKFGLTISELVQLIRTLENREMAGQLELLHFH 253 Query: 165 NNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGG-----------------GIHF 204 + + ++ I + + QI+++ +GG Sbjct: 254 LGSQIADIQVLRSAIREIMQVYADLMLRGMQIKYLDVGGGLGVNYGGDYDNPESSINYGL 313 Query: 205 TDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259 + V + + + + Q+ E G A+ + + L VL + + + Sbjct: 314 REYANVVVYTVKEICDQRQVPMPQLLSESGRALTAHHSVLVVPVLGVHKPDSPYM 368 >gi|3421188|gb|AAC68527.1| arginine decarboxylase [Brassica nigra] Length = 401 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 31/245 (12%), Positives = 74/245 (30%), Gaps = 28/245 (11%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEKF---GGETHAYNVAYK 82 + + +KC + + + ++ G + S E++L F E +K Sbjct: 1 YQGVYPVKCNQDRFIIEDIVRFGSSFRFGLEAGSKPEILLAMSCFCKGNPEAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E + I+ +L+ D + K++ + GLR +S + Sbjct: 61 DSEYVSFALLGRKLELNTVIVLEQEEELDLVIDLSPKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186 + G + + L FH + S S + + + Sbjct: 121 TSGEKG-KFGLTTIQILRVVRNLRQLGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179 Query: 187 GH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 ++ I +GGG+ + + E+Y+ + + + + Sbjct: 180 SELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYA-EAVVASVRFVCDQKSV 238 Query: 244 LNTTV 248 + + Sbjct: 239 KHPVI 243 >gi|188527815|ref|YP_001910502.1| arginine decarboxylase [Helicobacter pylori Shi470] gi|188144055|gb|ACD48472.1| arginine decarboxylase [Helicobacter pylori Shi470] Length = 615 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 83/301 (27%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + +A K + LK + + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 N 257 N Sbjct: 349 N 349 Score = 40.5 bits (93), Expect = 0.44, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + + + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|296124022|ref|YP_003631800.1| arginine decarboxylase [Planctomyces limnophilus DSM 3776] gi|296016362|gb|ADG69601.1| arginine decarboxylase [Planctomyces limnophilus DSM 3776] Length = 636 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 64/237 (27%), Gaps = 31/237 (13%) Query: 2 IKTPYYLIDKQKLLNNLDTAL----YIRKNAGVK----LLLALKCFAAWGMFDTL----N 49 + TP L Q L N L + G + + +K + + Sbjct: 60 LHTPLLLRFPQILTNQLKKLATSYIQAIEEYGYQGRHFPVFPMKVNPRREVVEEFLKDSA 119 Query: 50 QYMDGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108 ++ G S E+ G + + +KD + N V + K Sbjct: 120 RFNVGLECGSKPELYAGLAQVQHPNSLLICNGFKDDSFIRLAMLGVEAGKNVVIVIEKLS 179 Query: 109 DKAQKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 + L+ + P S A ++ G + ++ Sbjct: 180 ELITTLNLADETGVMPMIGLRSKLYSRGSGKWASSGGDSAKFGLTTSELLDCVRLLKDRG 239 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207 ++ L H + +K + + T I+ + +GGG+ Sbjct: 240 RLSSLKLLHSHIGSQITEIKRVKMAMKEAARVYAKLRQLGTPIDTMDIGGGLGVDYD 296 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 13/73 (17%) Query: 296 SCLAGDIFGEFHFEKPV---------KIGD--RISFEDVAGYNINRKNWFNGINMP--TI 342 +C + +F K V K + + V Y ++ N +P Sbjct: 502 TCDSDGRIDKFVDLKDVREVLELHKWKPEEPYYLGIFLVGAYQEVMGSFHNLFGLPNEAH 561 Query: 343 AVKNVDGTIKAIR 355 V + +G + Sbjct: 562 VVMDAEGRWHITK 574 >gi|294141296|ref|YP_003557274.1| biosynthetic arginine decarboxylase [Shewanella violacea DSS12] gi|293327765|dbj|BAJ02496.1| biosynthetic arginine decarboxylase [Shewanella violacea DSS12] Length = 656 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 90/311 (28%), Gaps = 55/311 (17%) Query: 1 MIKT----PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTL 48 M+K+ P + Q L + +++ + + L+ +K + + + Sbjct: 72 MVKSGVALPVLVRFPQILHHRVNSLCHAFNLAIQKYQYESDYLLVYPIKVNQQQTVVEEI 131 Query: 49 -----NQYM--DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCD 94 ++ + G + S E+M + YKD E L + Sbjct: 132 LASQKSKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDIEYIRLALIGEKLGHKV 191 Query: 95 TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI-- 151 I+ +S+L +A+KL L + +++ + + G + Sbjct: 192 YIVLEKLSELKCILQEAKKLGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLTV 251 Query: 152 ------ESEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202 E + + L FH + + + E T ++ +GGG+ Sbjct: 252 IESLKDEEMLDCLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELQKLGTNVKCFDVGGGL 311 Query: 203 HFTDK--------------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLN 245 + L + ++Y + E G + + L Sbjct: 312 AVDYDGTRSQSSNSMNYGLTEYANNIVSVLTDICKEYQQPMPQIISESGRYLTAHHAVLI 371 Query: 246 TTVLDISENIK 256 + V+ Sbjct: 372 SDVIGTEAYKP 382 >gi|51703308|gb|AAR84411.2| arginine decarboxylase [Daucus carota] Length = 570 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 60/200 (30%), Gaps = 25/200 (12%) Query: 33 LLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCE 85 A+KC + D + ++ G + S E++L ++ +KD E Sbjct: 1 FYAVKCNQDKFVVDDIVKFGSAFRFGLEAGSKPELLLAMSALCKGSPDSFLVCNGFKDAE 60 Query: 86 IDAVLSNCDTIIFNTVS--QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN-----R 138 + + FNTV +L + D L +K+G+R + + Sbjct: 61 YITLALIGRKLNFNTVIVLELEEEVDLVIDLSRKLGVRPVIGMRAKLRTKHQGHFGSTSG 120 Query: 139 PFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFG 187 + G + + L FH + + + E Sbjct: 121 EKGKFGLTTTQILRVVKKLAQCGMLDCLQLLHFHIGSQIPTTALLADGVGEAAQVYCELV 180 Query: 188 HFITQIEWISLGGGIHFTDK 207 ++ I +GGG+ Sbjct: 181 RLGARMGVIDIGGGLGIDYD 200 >gi|291288493|ref|YP_003505309.1| arginine decarboxylase [Denitrovibrio acetiphilus DSM 12809] gi|290885653|gb|ADD69353.1| arginine decarboxylase [Denitrovibrio acetiphilus DSM 12809] Length = 641 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 89/294 (30%), Gaps = 44/294 (14%) Query: 19 DTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEKF 70 +T + K G K + +K + +T+ +Y G + S E++ Sbjct: 86 ETFRNVIKETGYTGEFKGVFPIKVNQQEQVIETITKYGKKYNHGLEAGSKPELIAAISML 145 Query: 71 GG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------KFKDKAQKLHKKIGLRIN 123 + + YKD E + + + FN + ++A+K+ K L + Sbjct: 146 DNRDAYLICNGYKDEEFIDLGLHAVKMGFNCYFVVEVPGEINVILERAKKMGVKPLLGLR 205 Query: 124 PSVSYSKFILADPNRPFSR-LGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLC 174 ++ + + G I+ + + ++ L +H + + Sbjct: 206 TKLTTQAEGQWSESGGDNSVFGLTISQMIDVIDKLKEENMLDCLHLLHYHIGSQIANIRD 265 Query: 175 FSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDK--------------DYPVKDFCQR 217 A + + ++ I GGG+ + D + Sbjct: 266 IRAGAMEACRVYEEMVKEGANMKIIDFGGGLAVDYDGSNTNYHSSRNYSTEEYCYDIVES 325 Query: 218 LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH 268 + +K I E G A V + L +LD+S + + + Sbjct: 326 IITVLDKNNIPHPTIITESGRATVAYYSVLLFNILDVSSFTPHPLPEKLPETTN 379 >gi|330508848|ref|YP_004385276.1| arginine decarboxylase [Methanosaeta concilii GP-6] gi|328929656|gb|AEB69458.1| arginine decarboxylase [Methanosaeta concilii GP-6] Length = 652 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 34/295 (11%), Positives = 80/295 (27%), Gaps = 46/295 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIR-------KNAG-VKLLLALKCFAAWGMFDTLNQYMD--- 53 P L Q L + +D +G + + +K + + + +Y Sbjct: 59 PVLLRFPQMLEDRIDEITGAFMGAIEEFNYSGTYQPIFPMKVNQRKEVIEYIIKYGAKHK 118 Query: 54 -GTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNK 106 G + E++ YKD + N I+ + ++ Sbjct: 119 IGMEVGTKAELLAALSLGLPRYAPLICNGYKDEDYLRLALSIHNLNNIIIVVDLFEEIYD 178 Query: 107 FKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIES--------EIKN 157 A + + + + + ++ G + +E + Sbjct: 179 ILKYADAMGVVPRVGMRVKLFARGSGRWVESGGESAKFGLSTSEALELMRILEERGLTSS 238 Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGH--FITQIEWISLGGGIHFTDK-------- 207 + L FH + + + + + IE++++GGG+ Sbjct: 239 LKMLHFHIGSQITDIRTVKNAMNEAARVYAKARKMADIEYLNVGGGLSVDYNGSNTATPS 298 Query: 208 ---------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 + Q++ + E I E G AI + L ++ Sbjct: 299 SANYSLQEYANDIVYTVQKICDDEEVPCPTIVSESGRAIAAYHSMLIFKIIGRKN 353 >gi|34495199|emb|CAE02645.1| arginine decarboxylase [Lotus japonicus] Length = 587 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 28/225 (12%), Positives = 63/225 (28%), Gaps = 33/225 (14%) Query: 16 NNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEV 63 N L++ + + + +KC + + + ++ G S S E+ Sbjct: 20 NRLESLQSAFDYAVQSEGYGSHYQGVYPVKCNQDRFVVEDIVRFGSSFRFGLESGSKPEL 79 Query: 64 MLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKL 114 ++ E +KD E ++ I+ +++ D + K+ Sbjct: 80 LMAMSCLCKGNAEALLICNGFKDAEYISLALAARKLALNSVIVLEQEEEVDLIIDLSNKM 139 Query: 115 HKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHN 165 H + + + + + + G + + L FH Sbjct: 140 HIRPVIGMRAKLRTKHSGHFGGTSGERGKFGLTTAQILRVVKKLEHAGMLDCLQLLHFHI 199 Query: 166 NCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 + S I E Q+ I +GGG+ Sbjct: 200 GSQIPSTALLADGVGEAAQIYCELVRLGAQMRVIDIGGGLGIDYD 244 >gi|207722228|ref|YP_002252664.1| siderophore synthesis decarboxylase (partial sequence c terminus) protein [Ralstonia solanacearum MolK2] gi|207728413|ref|YP_002256807.1| putative siderophore synthesis decarboxylase (partial sequence c terminus) protein [Ralstonia solanacearum MolK2] gi|206587404|emb|CAQ17986.1| putative siderophore synthesis decarboxylase (partial sequence c terminus) protein [Ralstonia solanacearum MolK2] gi|206591659|emb|CAQ57271.1| putative siderophore synthesis decarboxylase (partial sequence c terminus) protein [Ralstonia solanacearum MolK2] Length = 114 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 3/94 (3%) Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHF 308 + A VP+ P+ +CG C D+ Sbjct: 4 GGTHHFRLPASWQHNHPFAIVPNAQW--TYPFARPSVQAQAVTLCGELCTPKDVLARDVV 61 Query: 309 EKPVKIGDRISFEDVAGYNINRKNW-FNGINMPT 341 + +GDRI F+ Y + + F P Sbjct: 62 VDRLSVGDRIVFQLAGAYGWHISHHDFLSHPHPE 95 >gi|109900172|ref|YP_663427.1| arginine decarboxylase [Pseudoalteromonas atlantica T6c] gi|109702453|gb|ABG42373.1| arginine decarboxylase [Pseudoalteromonas atlantica T6c] Length = 642 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 90/313 (28%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNN--------LDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L + ++T + + +K + + + Sbjct: 66 PVVVRFHDILRSQVACLNQTFINTIEEAQYQGKYMGVYPVKVNQMREVVEEIVDAGAPFN 125 Query: 54 -GTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK- 110 G + S E++ ++ YKD E + + + + K+ + Sbjct: 126 YGLEAGSKAELITVMAYNTNIDSLTILNGYKDAEFMRLALLGRKLGRKMIVVIEKYSELS 185 Query: 111 -----AQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156 A++L + + ++ + + + G + I + Sbjct: 186 LLVNAAKQLDVMPIIGLRSKMTVKGRGKWESSGGDRAKFGLTTSEMICAARYLESEGMGE 245 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + L FH + ++ + I E ++E++ +GGG+ Sbjct: 246 CLKLLHFHIGSQLTDIRAVKEAISEGGRIYAELHRMGFKLEYVDVGGGLGIDYDGSKSTN 305 Query: 208 ----DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++++ + + + E G AI + + + V+ Sbjct: 306 DSSRNYTMEEYVADVVYGMREVCDLEGVPHPTLVSESGRAITAHHSCVVAQVVGEIRANS 365 Query: 257 NLVIVDSSVEAHV 269 + D HV Sbjct: 366 AELPTDKLPNDHV 378 >gi|77360018|ref|YP_339593.1| arginine decarboxylase [Pseudoalteromonas haloplanktis TAC125] gi|76874929|emb|CAI86150.1| arginine decarboxylase, PLP-binding, biosynthetic [Pseudoalteromonas haloplanktis TAC125] Length = 637 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 89/325 (27%), Gaps = 51/325 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDT-------LN 49 P + Q L + + + A L+ +K + + L Sbjct: 62 PALVRFPQILHHRVHSLCAAFNTAIADYGYPKDYLLVYPIKVNQQREVVEEIVASQAQLE 121 Query: 50 QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 + G + S E++ L + N + L + I+ +S Sbjct: 122 KKQLGLEAGSKPELLTVLALAEKTSAVIVCNGYKDKEYVRLALIGEKLGHKVYIVLEKLS 181 Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIE--------S 153 +L+ +A++L+ K + I S K S+ G + Sbjct: 182 ELDMVLSQAKELNVKPRIGIRVRLASQGKGKWQASGGEKSKFGLSASQVLHVVNRLKESD 241 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 ++ V + FH + + + E +IE + +GGG+ Sbjct: 242 QLDLVQLVHFHLGSQMANIRDVRLGVSEAARFYCELRKLGAKIECLDVGGGLAVDYDGTR 301 Query: 208 -------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISE 253 +Y + ++ + Q E G A+ + L + V+ Sbjct: 302 SQSHNSMNYSLAEYANNIVYTIGDICKQYEQPFPTIISESGRALTAHHAVLISNVIGTES 361 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQES 278 + + + + Sbjct: 362 YTPEEIEAPADDAPQLLKNMWMSWQ 386 >gi|126465116|ref|YP_001040225.1| arginine decarboxylase [Staphylothermus marinus F1] gi|126013939|gb|ABN69317.1| arginine decarboxylase [Staphylothermus marinus F1] Length = 589 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 79/273 (28%), Gaps = 40/273 (14%) Query: 18 LDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEK 69 + + + G K + LK + + DT+ +Y G + + EV L + Sbjct: 70 YEAFMEAFRKFGYKGAFKPVYPLKSNSTPIVVDTIWRYGIKYSWGFNAGTYPEVKLISKY 129 Query: 70 F--GGETHAYNVAYK----DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + D S + ++ + ++ IGLR+ Sbjct: 130 INEKPRLLVVDGIKDNKLLDLLSKMCDSWEIIVDIESMRDADLL---SKYQDLNIGLRVK 186 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKS----FL 173 + S S + + + S+ G E K+ L H + Sbjct: 187 VT-SKSSGLWSHSSGLDSKFGLLINTLDEMVEKHPWVPNRTVLLHVHAGSQITDKNRLED 245 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFS-- 222 + I +I GGG+ + +Y + ++ + L + Sbjct: 246 IIRETIILYNNLVKTGFKNIRYIDFGGGLAYPYIEASNHVFSANYSLNEYAEILVKELVK 305 Query: 223 -EKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 + + I E G IV T ++D Sbjct: 306 SAENTPDIVFEGGRYIVAPHRITVTKIIDTRPY 338 >gi|154148932|ref|YP_001406487.1| arginine decarboxylase [Campylobacter hominis ATCC BAA-381] gi|153804941|gb|ABS51948.1| arginine decarboxylase [Campylobacter hominis ATCC BAA-381] Length = 613 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 83/285 (29%), Gaps = 42/285 (14%) Query: 13 KLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH 67 ++ +N A + G + LK G L + G + S E++L Sbjct: 62 EIYSNFARARKEFEYKGEFHAVYPLKVNQYPGFVKNLVKLGKHYKYGLEAGSKAELLLAM 121 Query: 68 EKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKLHKKI 118 + +KD I A + + TI +S+L + A I Sbjct: 122 TYNNFDAPITVNGFKDKELINIGFIAAEMGHNITITIEGLSELKAIIETAKERFAPKPFI 181 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNNCENK 170 GLRI S I A S+ G + IE+ I + FH + Sbjct: 182 GLRIRLHNSG-TGIWAKSGGINSKFGLTSTELIEAISMLKEANLIDRFTMIHFHIGSQIS 240 Query: 171 SFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKD---------------YPV 211 L + ++ I+LGGG+ V Sbjct: 241 EIHPLKKALTEAGNIYAELRKMGACNLKSINLGGGLAIEYSQTKENANRNYTLREYANDV 300 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + + I++E G + + L VL++ Sbjct: 301 VFLLKTIANHKKVDEPDIFVESGRFVSASHAVLIAPVLELFSQEY 345 Score = 37.8 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 57/171 (33%), Gaps = 19/171 (11%) Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273 + + + + V + ++ +++ N +L I + ++ +V+ S+ +PD+ Sbjct: 397 YVDLIDRSNGEILVHLIMKKSISMLGN-KQNYADLLKIQDEVQERYLVNFSIFQSLPDFW 455 Query: 274 LYQESATIYPNTGPYT-----AMVCGRSCLA-----GDIFGEFHFEKPV---KIGDRISF 320 ++ I P A + +C + D F + K I F Sbjct: 456 GIKQHFPIMPLEKLDERPTLSASIWDITCDSDGEISFDSIKNPLFLHDIDPEKENYFIGF 515 Query: 321 EDVAGYNINRKNWFNGINMPTIAVKN--VDGTIKA---IREFSYNDYYNNL 366 V Y N PT A DG + + S +D ++ Sbjct: 516 FLVGAYQEVLGMSHNLFAHPTEATIRLKDDGGYEICDLLESQSVSDILEDM 566 >gi|282857080|ref|ZP_06266327.1| metal-activated pyridoxal enzyme [Pyramidobacter piscolens W5455] gi|282585089|gb|EFB90410.1| metal-activated pyridoxal enzyme [Pyramidobacter piscolens W5455] Length = 369 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 93/330 (28%), Gaps = 13/330 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP L+D++ +++N+ GV L K + G + L Sbjct: 6 LDTPALLVDREIMMDNIRAMQNRANRKGVALRPHTKTHKTPAIALIQRDCGCKGIAVAKL 65 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + F + N D ++ + +I + + A+K+ Sbjct: 66 GEAEVMADAGFD-DIFIANEIVGDIKMKRLRKLAQSIKLSWGIDCPDHVEAAEKVFASAS 124 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG-LMFHNNCEN--------K 170 ++ V S + ++ ++ G +C N K Sbjct: 125 VKAEVLVEIEVGERRSGIIEESDFLDLLDSIKKAPHVHLKGVFSHEGHCYNSPDLATCRK 184 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 F+ + +IE +S+G D+PV + + + Sbjct: 185 EFIASQKRTLRFVQIAKEQGFEIETVSIGSTPSLMHDDFPVLEGISEFRPGTYVLMDASM 244 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290 + T+ TV+ + ++ V + + + G Sbjct: 245 ANAAGTLSRCAATVLATVISRPTPERVILDVGAKGITMQRRSQGITATEGLGTVKGYDNV 304 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + I F VKIGD++ Sbjct: 305 YIHD-VYDEHAIIYNKTFHDAVKIGDKVEI 333 >gi|120437944|ref|YP_863630.1| arginine decarboxylase [Gramella forsetii KT0803] gi|117580094|emb|CAL68563.1| arginine decarboxylase [Gramella forsetii KT0803] Length = 467 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 52/393 (13%), Positives = 110/393 (27%), Gaps = 61/393 (15%) Query: 13 KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLYE-- 62 K+ N++ + K K + + + +SS ++ Sbjct: 52 KISQNINRAKDWFKSAIEKHDYKGSYNYCYCTKSSHFEHVLNEALKNDIHIETSSAFDIN 111 Query: 63 ----VMLGHEKFGGETHAYNVAYKDCEIDAVL---SNCDTIIFNTVSQLNKFKDKAQKLH 115 + + N +D I+ + + + + ++K+ Sbjct: 112 IVEKLKKAGKISDDRWVICNGFKRDQYIENISRLLNGGHKNCLPIIDNYEELDLLSEKID 171 Query: 116 KKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171 K + I + +R + + K E++ + L F N + Sbjct: 172 DKFQVGIRIASEEEPKFEFYTSRLGIGYKNIVPFYNKQIKENDQVELKMLHFFINTGIRD 231 Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRL 218 + L ++ +++GGG + + + + Sbjct: 232 TAYYWNELNKCLKVYIALKKVAPHLDSLNIGGGFPIKNSLAFEYDYAYMVDEIINHIKLT 291 Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276 + +E I+ E G V + VL + +++SS +PD Sbjct: 292 CDDAEVDVPNIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNMINSSFITTLPDTWAIS 351 Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321 + A N ++ G +C + D +F EKP+ IG F Sbjct: 352 KKFVMLAVNRWNDEYERVLLGGLTCDSDDYYNSEQHTNAIYLPKFKKEKPLYIG----FF 407 Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDG 349 + Y F G I P + N D Sbjct: 408 NTGAYQDTIG-GFGGLQHCLIPQPKHILINKDE 439 >gi|323697600|ref|ZP_08109512.1| arginine decarboxylase [Desulfovibrio sp. ND132] gi|323457532|gb|EGB13397.1| arginine decarboxylase [Desulfovibrio desulfuricans ND132] Length = 637 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 80/295 (27%), Gaps = 42/295 (14%) Query: 18 LDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH-EKFGG 72 L + +K + + + ++ G + S E++ Sbjct: 86 LQAMKKLAYRGSYLGAYPIKVNQQQQVVEAVTRHGRRYHHGLEAGSKAELIAALGMHNDP 145 Query: 73 ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------FKDKAQKLHKKIGLRINPSV 126 E YKD E + + + F V + ++++ L K L + + Sbjct: 146 EAVLVCNGYKDEEFVDLALHAVQLGFQCVLVVEMPNELPLIIERSKALGVKPILGVRAKL 205 Query: 127 SYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSA 177 S + G IE + + + L +H + + A Sbjct: 206 SSQATGQWAESGGDRSIFGLNATQIIEVIDRLGEANMLDCLQLLHYHLGSQIPNIREIRA 265 Query: 178 MLKNIEKEFG---HFITQIEWISLGGGIHFTDK--------------DYPVKDFCQRLKE 220 + + + + ++ LGGG+ D + + Sbjct: 266 GVAEASRIYAGLTAEGAGMRYLDLGGGLAVDYDGTRTSLSSSRNYSVHEYCADVIEGVMT 325 Query: 221 FSEKY---SVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVP 270 ++ I E G A+V + L V+D E + H+ Sbjct: 326 VLDEQGVDHPTIITESGRALVAYYSVLLLNVVDAARFEPEPLPEALPEDTNIHIR 380 >gi|297380210|gb|ADI35097.1| arginine decarboxylase [Helicobacter pylori v225d] Length = 615 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 83/301 (27%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + +A K + LK + + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFFSAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 N 257 N Sbjct: 349 N 349 Score = 40.5 bits (93), Expect = 0.44, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + + + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|260432796|ref|ZP_05786767.1| arginine decarboxylase [Silicibacter lacuscaerulensis ITI-1157] gi|260416624|gb|EEX09883.1| arginine decarboxylase [Silicibacter lacuscaerulensis ITI-1157] Length = 629 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 37/327 (11%), Positives = 80/327 (24%), Gaps = 34/327 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM----DGTTSSSL 60 ++++ + ++ G K +K + D + ++ G + S Sbjct: 68 YLEREIAHINESFRDAIARTGYKGSYRGVFPIKVNQQAQVVDRIVEFGKQYNYGLEAGSK 127 Query: 61 YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFN------TVSQLNKFKDKAQK 113 E+++ E KD E + I FN + + + + + Sbjct: 128 PELVIALAHRLAPEALIVCNGVKDAEFIELAILSRKIGFNTVIVLESPKEADTVIEVYNE 187 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSR-LGEKCKDKIESEI--------KNVNGLMFH 164 L + L + ++ + G + + H Sbjct: 188 LGIEPLLGVRVKLTNQISGKWQESSGDRSTFGMNTDQLVAVVDKLRDAGLLHCLKLQHSH 247 Query: 165 NNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221 + E + + LGGG+ K + Sbjct: 248 LGSQVPDVNDVRRAVGEACRYYTELTREGVPLTHLDLGGGMGVDYTGE-KKATENSINYT 306 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH---VPDYLLYQES 278 E+Y + E + + T++ S + D E Sbjct: 307 VEEYCANVV-ETVAYAMDEAEVDHPTLVTESGRAVVATSSMLVFNVLESTLYDAPNGPEV 365 Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE 305 + A V G L+ D E Sbjct: 366 EPDDHHLVSDLAAVNGY--LSHDRLQE 390 >gi|332308197|ref|YP_004436048.1| arginine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175526|gb|AEE24780.1| arginine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 640 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 90/313 (28%), Gaps = 48/313 (15%) Query: 5 PYYLIDKQKLLNN--------LDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L + +DT + + +K + + + Sbjct: 64 PVVVRFHDILRSQVACLNQTFIDTIEEAQYQGKYMGVYPVKVNQMREVVEEIVDAGAPFN 123 Query: 54 -GTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK- 110 G + S E++ ++ YKD E + + + + K+ + Sbjct: 124 YGLEAGSKAELITVMAYNTNIDSLTILNGYKDAEFMRLALLGRKLGRKMIVVIEKYSELG 183 Query: 111 -----AQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156 A++L+ + ++ + + + G + I + Sbjct: 184 LLVDAAKQLNVMPIIGFRSKMTVKGRGKWESSGGDRAKFGLTTSEMICAARYLESQGMGE 243 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + L FH + ++ + I E ++E++ +GGG+ Sbjct: 244 CLKLLHFHIGSQLTDIRAVKEAISEGGRIYAEMHRMGFKLEYVDVGGGLGIDYDGSQSTN 303 Query: 208 ----DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 +Y ++++ + + + E G AI + + + V+ Sbjct: 304 DSSRNYTMEEYVADVVYGMREVCDLEGVPHPTLVSESGRAITAHHSCVVAQVVGEIRANS 363 Query: 257 NLVIVDSSVEAHV 269 + D HV Sbjct: 364 AELPTDPLPNDHV 376 >gi|323496406|ref|ZP_08101464.1| arginine decarboxylase [Vibrio sinaloensis DSM 21326] gi|323318683|gb|EGA71636.1| arginine decarboxylase [Vibrio sinaloensis DSM 21326] Length = 636 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/272 (11%), Positives = 70/272 (25%), Gaps = 35/272 (12%) Query: 5 PYYLIDKQKLLNN----LDTALYIRKN----AGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + L+ +K + D + + Sbjct: 61 PVLVRFPQILHQRVHGICQAFNQAIEEYQYSNNYLLVYPIKVNQQKEVVDEILESQAQLE 120 Query: 54 ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N + L + I+ +S Sbjct: 121 TKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L I ++ + + G + E Sbjct: 181 ELDLVLKEAKSLGVKPRLGIRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVIERLKQEE 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 ++ + + FH + + E I++ +GGG+ Sbjct: 241 QLDAMQLVHFHLGSQMANIRDIRNGVNESARFYCELRAMGAGIKYFDIGGGLAVDYDG-T 299 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 + +Y+ I G+ Sbjct: 300 RSQSSNSMNYGLIEYARNIVSTVGDVCQQYGQ 331 >gi|3421180|gb|AAC68525.1| arginine decarboxylase [Boechera stricta] Length = 405 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 73/245 (29%), Gaps = 28/245 (11%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +KC + + + ++ G + S E++L E +K Sbjct: 1 YQGVYPVKCNQDRFIIEDIVEFGSSFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DSEYISLALFGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTIQILRVVRKLRQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + + + Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYA-AAVVASVRFVCDQKSV 238 Query: 244 LNTTV 248 + + Sbjct: 239 KHPVI 243 >gi|3421198|gb|AAC68530.1| arginine decarboxylase [Arabidopsis arenosa] Length = 405 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 73/245 (29%), Gaps = 28/245 (11%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +KC + + + ++ G + S E++L E +K Sbjct: 1 YQGVYPVKCNQDRFIIEDIVEFGSSFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DSEYISLALFGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTIQILRVVRKLSQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + + + Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYA-AAVVASVRFVCDQKSV 238 Query: 244 LNTTV 248 + + Sbjct: 239 KHPVI 243 >gi|2558608|emb|CAA74609.1| ornithine decarboxylase [Plasmodium falciparum] Length = 253 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 50/185 (27%), Gaps = 6/185 (3%) Query: 36 LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSN 92 +KC + L+ +S+ E+ + + + K Sbjct: 6 VKCNNDEVVIKFLHGLNCNFDCASIGEISKVIKLLPNLSRDRIIFANTIKSINSLIYARK 65 Query: 93 CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 + + + K + LRIN K ++ E+ + Sbjct: 66 ENINLCTFDNLDVLKKIYKYHPKCSLILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAK 125 Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY 209 N+ G+ FH K+ F +K F I+LGGG + Sbjct: 126 KHNLNIVGVSFHVGSNTKNLFDFCLAIKLCRDVFDMSSNMGFNFYIINLGGGYPEELEYD 185 Query: 210 PVKDF 214 K Sbjct: 186 NAKKH 190 >gi|167623733|ref|YP_001674027.1| arginine decarboxylase [Shewanella halifaxensis HAW-EB4] gi|189046767|sp|B0TQX3|SPEA_SHEHH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|167353755|gb|ABZ76368.1| arginine decarboxylase [Shewanella halifaxensis HAW-EB4] Length = 637 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 85/320 (26%), Gaps = 55/320 (17%) Query: 1 MIKT----PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DT 47 M+K+ P + Q L + +++ A L+ +K + + Sbjct: 53 MVKSGVALPVLVRFPQILHHRVNSLCQAFNQAIQKYQYENDYLLVYPIKVNQQQTVVEEI 112 Query: 48 LNQYM------DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNT 100 L + G + S E+M + YKD E + + + Sbjct: 113 LASQVEKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDKEYIRLALIGEKLGHKV 172 Query: 101 VSQLNKFKDKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKIE- 152 L K + L + L + P + K S+ G ++ Sbjct: 173 YIVLEKISELKVVLEQAKELGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLQV 232 Query: 153 -------SEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202 + + ++ L FH + + + E ++ +GGG+ Sbjct: 233 ITSLKQENMLDSLELLHFHLGSQIANIRDIRQGVSEAGRFYCELMKLGANVKCFDVGGGL 292 Query: 203 HFTDK--------------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLN 245 + L + ++Y + E G + + L Sbjct: 293 AVDYDGTRSQSSHSMNYGLTEYANNIVSVLTDMCKEYEQPMPRIISESGRYLTAHHAVLL 352 Query: 246 TTVLDISENIKNLVIVDSSV 265 T V+ + + Sbjct: 353 TDVIGTEAYKPEDIQPPAED 372 >gi|3421210|gb|AAC68533.1| arginine decarboxylase [Thlaspi arvense] gi|3421214|gb|AAC68534.1| arginine decarboxylase [Eutrema salsugineum] Length = 403 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 74/245 (30%), Gaps = 28/245 (11%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +KC + + + ++ G + S E++L E +K Sbjct: 1 YQGVYPVKCNQDRFIIEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DSEYISLALLGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTIQILRVVRNLRQAGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + + + + Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYA-EAVVASVRFVCDQKSV 238 Query: 244 LNTTV 248 + + Sbjct: 239 KHPVI 243 >gi|120553457|ref|YP_957808.1| arginine decarboxylase [Marinobacter aquaeolei VT8] gi|166220849|sp|A1TY02|SPEA_MARAV RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|120323306|gb|ABM17621.1| arginine decarboxylase [Marinobacter aquaeolei VT8] Length = 637 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 79/303 (26%), Gaps = 51/303 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTL-------N 49 P + L + ++ + +K + + L + Sbjct: 61 PVLIRFTDILHDRVNKLCNAFNKVTQEQGYRGRYTAVYPIKVNQQRRVVEELLSAEPAAS 120 Query: 50 QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E+M L K G N I L + I+ S Sbjct: 121 ANQVGLEAGSKPELMAVLALAKQAGSVIVCNGYKDREYIRLALIGQKLGHRVFIVVEKQS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIK----- 156 +L ++A+KL + + ++ + S+ G ++ Sbjct: 181 ELPLILEEAKKLGISPLIGVRARLATIGKGNWQNTGGEKSKFGLSASQVLDVVDTLKQAG 240 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + L FH + + E I + +GGG+ + Sbjct: 241 ALGTLQLLHFHLGSQIANIRDIQTGLRECARFYTELHAMGAPIGTVDIGGGLGVDYEGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE 253 + L+ ++ + E G A+ + + L T V+D Sbjct: 301 SRSSCSMNYSVFEYAYNVVHVLQSECDRQGIPHPDLISESGRALTAHHSVLVTNVIDREY 360 Query: 254 NIK 256 Sbjct: 361 PDN 363 >gi|3421184|gb|AAC68526.1| arginine decarboxylase [Barbarea vulgaris] Length = 405 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 73/245 (29%), Gaps = 28/245 (11%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +KC + + + ++ G + S E++L E +K Sbjct: 1 YQGVYPVKCNQDRFIIEDIVEFGSKFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DSEYISLALLGKKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTIQILRVVRKLRQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + + + Sbjct: 180 CELVRLGANMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYA-AAVVASVRFVCDQKSV 238 Query: 244 LNTTV 248 + + Sbjct: 239 KHPVI 243 >gi|221326406|gb|ACM17082.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+F + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVFEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMEVQPMIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|308062311|gb|ADO04199.1| arginine decarboxylase [Helicobacter pylori Cuz20] Length = 615 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 84/301 (27%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + +A K + LK +F + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 N 257 N Sbjct: 349 N 349 Score = 40.5 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + + + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|221326370|gb|ACM17064.1| arginine decarboxylase [Solanum chmielewskii] Length = 222 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGGKG-KFGLTTTQILR 214 >gi|109947192|ref|YP_664420.1| arginine decarboxylase [Helicobacter acinonychis str. Sheeba] gi|109714413|emb|CAJ99421.1| arginine decarboxylase [Helicobacter acinonychis str. Sheeba] Length = 615 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 88/314 (28%), Gaps = 48/314 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + A K + LK + + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +T +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPKTPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ I +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLICPKIGIRIRLHSTGIGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 NLVIVDSSVEAHVP 270 N + + P Sbjct: 349 NEKSLKIKESDNPP 362 Score = 40.1 bits (92), Expect = 0.52, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY ++S + P Sbjct: 415 HLIVKKAVQLLYFKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQSFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + + + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|317178664|dbj|BAJ56452.1| arginine decarboxylase [Helicobacter pylori F30] Length = 615 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 84/301 (27%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + +A K + LK +F + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 N 257 N Sbjct: 349 N 349 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + I + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|308063817|gb|ADO05704.1| arginine decarboxylase [Helicobacter pylori Sat464] Length = 615 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 35/301 (11%), Positives = 84/301 (27%), Gaps = 48/301 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52 P + + + + +A K + LK +F + Sbjct: 49 PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ + + T+ +++L Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168 Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 A++ +I S + A S+ G + +E+ Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 ++ + + FH + + + +++GGG+ + Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G I N L VL++ + Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348 Query: 257 N 257 N Sbjct: 349 N 349 Score = 40.5 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%) Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284 +L +A+ + +L I E ++ +++ S +PDY +++ + P Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474 Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337 +A + +C + F + + + ++F V Y N Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534 Query: 338 NMPTI--AVKNVDGTIKA 353 PT V + G + Sbjct: 535 THPTEFSVVFDEKGDYEV 552 >gi|3421218|gb|AAC68535.1| arginine decarboxylase [Nasturtium officinale] Length = 405 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 73/245 (29%), Gaps = 28/245 (11%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +KC + + + ++ G + S E++L E +K Sbjct: 1 YQGVYPVKCNQDRFIIEDIVEFGSKFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DSEYISLALLGKKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTIQILRVVRKLRQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + + + Sbjct: 180 CELVRLGANMKVIEIGGGLGIDYDGSKSGESDLSVAYTLEEYA-AAVVASVRFVCDQKSV 238 Query: 244 LNTTV 248 + + Sbjct: 239 KHPVI 243 >gi|225011270|ref|ZP_03701727.1| Orn/DAP/Arg decarboxylase 2 [Flavobacteria bacterium MS024-3C] gi|225004580|gb|EEG42545.1| Orn/DAP/Arg decarboxylase 2 [Flavobacteria bacterium MS024-3C] Length = 466 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 48/410 (11%), Positives = 104/410 (25%), Gaps = 77/410 (18%) Query: 3 KTPY-YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCF---------------AAWGMFD 46 TP + K+ N+ A N A+K + + Sbjct: 42 GTPLKFTY-LPKISENIQHAKGWFDN-------AIKKNDYKGKYYYCYCTKSAHFKHVLE 93 Query: 47 TLNQYMDGTTSSSLYEVMLG---HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ 103 +SS +++ + E + + + V + I + Sbjct: 94 EALSNDIHIETSSAFDINIVESLKEAGKIKPDTFVICNGFKRAQYVDNIARLINSGHENC 153 Query: 104 ------LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIES 153 + ++K+ + I + +R + + + Sbjct: 154 IPIIDNYEEISLLSEKIDGDYKIGIRIASEEEPKFEFYTSRLGIGYRNIVPFYEDQIKGN 213 Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH------- 203 + + L F N + L ++ +++GGG Sbjct: 214 DKVELKMLHFFINTGIGDNAYYWNELSKCLKVYVRLKKICPSLDSLNIGGGFPIKNSLAF 273 Query: 204 ---FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--L 258 + + + + ++ I+ E G V + VL + Sbjct: 274 EYDYAYMIEEILNQINAICAEADVPVPHIFTEFGSFTVGESGGAIYQVLYQKQQNDREKW 333 Query: 259 VIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE----- 309 ++DSS +PD + ++ G +C + D + Sbjct: 334 NMIDSSFITTLPDTWAINKRFIMLPINRWQDEYERVLLGGLTCDSDDYYNSEQNMNAIYL 393 Query: 310 ------KPVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVD 348 KP+ IG F + Y + F G I P + D Sbjct: 394 PVFKKEKPLYIG----FFNTGAYQESIG-GFGGLQHCLIPTPKHVLIQKD 438 >gi|332532495|ref|ZP_08408373.1| biosynthetic arginine decarboxylase [Pseudoalteromonas haloplanktis ANT/505] gi|332038138|gb|EGI74585.1| biosynthetic arginine decarboxylase [Pseudoalteromonas haloplanktis ANT/505] Length = 637 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 53/304 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + + + A L+ +K + + + Sbjct: 62 PALVRFPQILHHRVHSLCGAFNTAIENYGYPKDYLLVYPIKVNQQREVVEEIVASQAQVE 121 Query: 54 ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N + L + I+ +S Sbjct: 122 KKQLGLEAGSKPELLTVLALAEKTSAVIVCNGYKDKEYVRLALIGEKLGHKVYIVLEKLS 181 Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG- 160 +L+ +A++L+ K + I S K S+ G + + + G Sbjct: 182 ELDMVLSQAKELNVKPRIGIRVRLASQGKGKWQASGGEKSKFGLSASQVLH-VVNRLKGA 240 Query: 161 --------LMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-- 207 + FH + + + E +I+ + +GGG+ Sbjct: 241 NQLDLLQLVHFHLGSQMANIRDVRLGVSEAARFYCELRKLGAEIDCLDVGGGLAVDYDGT 300 Query: 208 --------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDIS 252 +Y + ++ + Q E G A+ + L + V+ Sbjct: 301 RSQSHNSMNYSLAEYANNIVYTIGDTCKQYEQPMPTIISESGRALTAHHAVLISNVIGTE 360 Query: 253 ENIK 256 Sbjct: 361 SYTP 364 >gi|224372415|ref|YP_002606787.1| arginine decarboxylase [Nautilia profundicola AmH] gi|223588493|gb|ACM92229.1| arginine decarboxylase [Nautilia profundicola AmH] Length = 608 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 82/291 (28%), Gaps = 49/291 (16%) Query: 14 LLNNLDTALYIRKNA--------GVKLLLALKCFAAW----GMFDTLNQYMDGTTSSSLY 61 + +++ A + + LK + N+Y G + S Sbjct: 54 IRKQINSLYTSFNKAIKDFDYKGKFQAVFPLKVNQFPTFLKPLIKIANRYNYGLEAGSKA 113 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---------AQ 112 E++L +KD ++ + + +N + + Sbjct: 114 ELILAMAYNNKTAPITINGFKDKDMIRLAFIAGFMGYNVTITIEGLNELKSIIEVSGEYH 173 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFH 164 K+ IG+RI S I A S+ G + IE+ + + FH Sbjct: 174 KMPVNIGIRIRLHTSGVG-IWAKSGGIESKFGLSSTEIIEAIEILKQHNMLDKLKMIHFH 232 Query: 165 NNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY----------- 209 + ++ + + I++GGG+ + Sbjct: 233 IGSQINDISPLKKAIRESGNIYADLRKLGAKNLSAINIGGGLAIEYSQWEEKRDKNYSIE 292 Query: 210 ----PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + + I+ E G I + +T L V+++ Sbjct: 293 EFSNDVVYLLKEISNKKQVPMPDIFTESGRFIASPSTILIAPVIELFSQEY 343 >gi|221195320|ref|ZP_03568376.1| alanine racemase domain protein [Atopobium rimae ATCC 49626] gi|221185223|gb|EEE17614.1| alanine racemase domain protein [Atopobium rimae ATCC 49626] Length = 386 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 36/322 (11%), Positives = 87/322 (27%), Gaps = 10/322 (3%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYM-DGTTSSSLYEVM 64 Y++D L+ N ++L LK + TL++ G E Sbjct: 31 YIVDLDSLIENAQKLKKKANEKNIQLYFMLKQLGRNPLIAQTLDELGYAGAVCVDYREAT 90 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E H N+ + + + + + + + + A++L + + Sbjct: 91 TLGENGVRLGHVGNLVQIPLQSIERILTYRPEIVTVFSREEAKRIGEVAERLGFVQSIML 150 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD-KIESEIKNVNGLM-FHNNCENKSFLCFSAMLK 180 + + E+ + ++ ++ G+ F + + Sbjct: 151 KVLDTEDVQYSGQSGGFYVDELEQVEQEIAKTSGVHIAGVCSFPCFLFSDQTNRIETLHN 210 Query: 181 N-IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 ++ ++ + + +L + V Q E P A Sbjct: 211 VSTVQKACEYLHSVGYDNLQVNLPSQSCTALVDRVSQLQGTHMEPGHGLTGTTPYHAAGN 270 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + T+ + +SE NL + T V + + Sbjct: 271 DMD-EKTSYVYVSEISHNLGSNSYCYGGGFYRRGHLHRALVGKREDSAKTCEVNAPTPES 329 Query: 300 GDIFGEFHFEKPVKIGDRISFE 321 D + E + +GD + Sbjct: 330 IDYYFELS--QNATVGDTVLMC 349 >gi|313673051|ref|YP_004051162.1| arginine decarboxylase [Calditerrivibrio nitroreducens DSM 19672] gi|312939807|gb|ADR18999.1| arginine decarboxylase [Calditerrivibrio nitroreducens DSM 19672] Length = 615 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 82/302 (27%), Gaps = 49/302 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLNQ-YMD- 53 P + + +D K + G L LK + + Sbjct: 46 PLLIRFPHLIKEQIDLLFKAFKKSMKEYGYQGGFNALFPLKVNQFPNFVIPLMEMTKGIP 105 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106 G + S E+++ + +KD E+ A + + T+ +++L Sbjct: 106 YGLEAGSKPELIIAMAYNNPGSPIMVNGFKDKEMISLGFIAAKMGHDITLTIEGLNELET 165 Query: 107 FKDKAQKLHKKI---GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------- 156 A+++ K GLRI S I A S+ G + IE+ Sbjct: 166 ILTVAKEMGKPYPKIGLRIRLHSSGIG-IWAKSGGINSKFGLTSSELIEAMNMLKNSNML 224 Query: 157 -NVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 + FH + + + ++ I LGGG+ + Sbjct: 225 EYFTMIHFHIGSQISEISPLKKALREAGNIHAELYKMGAHNLKSIDLGGGLAVEYAQHDG 284 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + IYLE G + L VL++ Sbjct: 285 LSQRHYTLEEYASDVVFLLKTIAHNKHVPDPDIYLEAGRFVAAKHAVLVAPVLELFSQEY 344 Query: 257 NL 258 + Sbjct: 345 DQ 346 >gi|260773926|ref|ZP_05882841.1| biosynthetic arginine decarboxylase [Vibrio metschnikovii CIP 69.14] gi|260610887|gb|EEX36091.1| biosynthetic arginine decarboxylase [Vibrio metschnikovii CIP 69.14] Length = 636 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 79/303 (26%), Gaps = 51/303 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQY- 51 P + Q L + A L+ +K + D + + Sbjct: 61 PVLVRFPQILHQRVHNICDAFNQAIEECDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 120 Query: 52 --MDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 121 TKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156 +L+ +A+ L K L + ++ + + G + + Sbjct: 181 ELDLILKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVVERLRAEN 240 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + + FH + + E QI++ +GGG+ Sbjct: 241 QLEALQLVHFHLGSQMANIRDVRNGVNEAARFYCELRELGAQIDYFDVGGGLAIDYDGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISE 253 ++ + + Y I E G +I + L T V+ Sbjct: 301 SQSSNSMNYGLQEYARNIVNVVADMCNLYEQPKPIIISESGRSITAHHAVLITNVIGTEA 360 Query: 254 NIK 256 + Sbjct: 361 YMP 363 >gi|238501228|ref|XP_002381848.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357] gi|220692085|gb|EED48432.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357] Length = 155 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 2/106 (1%) Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284 Y+ + + + +L +++ I + + L QE+ + Sbjct: 32 YTAACKVVARRKQIGQDKLSQSDMLYLNDGIYGCFMNAVAENEIYRPILFKQETTSSTER 91 Query: 285 T-GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328 G + V G +C D + VK+GD + FE++ G+ Sbjct: 92 EAGEHRYSVWGPTCDGLDCIAKEATMGCEVKVGDWVKFENMGGFTA 137 >gi|212635804|ref|YP_002312329.1| arginine decarboxylase [Shewanella piezotolerans WP3] gi|226734333|sp|B8CR70|SPEA_SHEPW RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|212557288|gb|ACJ29742.1| Arginine decarboxylase [Shewanella piezotolerans WP3] Length = 637 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 91/326 (27%), Gaps = 51/326 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMF-DTLNQYM--- 52 P + Q L + +++ A L+ +K + + L + Sbjct: 61 PVLVRFPQILHHRVNSLCQAFNQAIQKYKYEADYLLVYPIKVNQQQTVVEEILASQVEKE 120 Query: 53 ---DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCDTIIFNTVS 102 G + S E++ + YKD E L + I+ +S Sbjct: 121 VPQLGLEAGSKPELLAVLAMAQKASSVIICNGYKDKEYIRLALIGEKLGHKVYIVLEKMS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L ++A++L L + +++ + + G + E Sbjct: 181 ELKVVLEQAKELGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLKVIELLQHEE 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + ++ L FH + + + E Q++ +GGG+ Sbjct: 241 MLDSLELLHFHLGSQIANIRDIRQGVSEAGRFYCELMKLGAQVKCFDVGGGLAVDYDGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253 + L + ++Y + E G + + L T V+ Sbjct: 301 SQSNNSMNYGLTEYANNIVSVLTDMCKEYEQPMPRIISESGRYLTAHHAVLLTDVIGTES 360 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESA 279 ++ S + + + Sbjct: 361 YKPETILPPSEDAPLLLQNMWQSWTE 386 >gi|254458054|ref|ZP_05071481.1| arginine decarboxylase [Campylobacterales bacterium GD 1] gi|207085447|gb|EDZ62732.1| arginine decarboxylase [Campylobacterales bacterium GD 1] Length = 609 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 81/292 (27%), Gaps = 49/292 (16%) Query: 14 LLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLN----QYMDGTTSSSLY 61 + + T A + LK + ++ G + S Sbjct: 55 IKKQITTLYSYFDKAIRYNNYQGNFHAVFPLKVNQYPHAVKAIAEQGREFGYGLEAGSKA 114 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEI------DAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E++L + +KD E+ A + T+ + +L + A + + Sbjct: 115 ELILAMSQTTHGAPITVNGFKDKEMMTLGFIAAQSGHNITLTIEGLGELETIIEVANECN 174 Query: 116 ---KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFH 164 IG+R+ S I A ++ G + IE+ N + FH Sbjct: 175 LKVPNIGIRVRL-HSAGTGIWAKSGGMDAKFGLTSTEIIEAITLLRNENMLDNFTMIHFH 233 Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQR--- 217 + + L+ + + I++GGG+ + Sbjct: 234 IGSQMEDIAPLKRALREAGNIYAELKKMGANSLNSINIGGGLAVEYDQHTHSKSRNYSVD 293 Query: 218 ------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 + IY E G IV + L T VL++ Sbjct: 294 EFSSSVVFLIGEIMNAKNVSHPDIYTESGRFIVASHAVLITPVLELFTQDYQ 345 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 42/141 (29%), Gaps = 13/141 (9%) Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288 ++ +A+ + + ++ ++++S+ +PDY + + P Sbjct: 409 VHSIIKKALYLTNAYSTNEFVQLQVRLQERYLINASIFQSLPDYWGLDQHFPVMPLHHLD 468 Query: 289 TAMV-----CGRSCLAGDIFGEFHFEK------PVKIGDR-ISFEDVAGYNINRKNWFNG 336 + +C + G + + D + F +V Y N Sbjct: 469 VVPLRAASLWDITCDSDGEIGFNPEKPLYLHDVNLDEEDYFLGFFNVGAYQETLGMNHNL 528 Query: 337 INMPTIAVKN-VDGTIKAIRE 356 P N D + I E Sbjct: 529 FTHPNEYTVNIDDTSYNIINE 549 >gi|297526616|ref|YP_003668640.1| Orn/DAP/Arg decarboxylase 2 [Staphylothermus hellenicus DSM 12710] gi|297255532|gb|ADI31741.1| Orn/DAP/Arg decarboxylase 2 [Staphylothermus hellenicus DSM 12710] Length = 589 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 37/281 (13%), Positives = 82/281 (29%), Gaps = 34/281 (12%) Query: 18 LDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEK 69 + + + G K + LK + + DT+ QY G + + E+ L + Sbjct: 70 YEAFMEAFRKFGYEGEFKPVYPLKSNSTTIVVDTIWQYGVKYNWGFNAGTYPEIKLLSKY 129 Query: 70 FGGETH-----AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + + N + I+ + K + L+ + +++ Sbjct: 130 TNKKPRLLVVDGIKDNKILDLLVKMNDNWEIIVDIESMRDADLLSKYRDLNIGLRIKVVS 189 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG----LMFHNNCENKSFLCFSAMLK 180 S + + F L + I+ + G L H + +++ Sbjct: 190 KSSGLWSHSSGLDSKFGLLINTLDEIIKE-HPWIPGRTVLLHVHAGSQITDKNKLENIIR 248 Query: 181 NIEKEFGH----FITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFS---EK 224 + I +I GGG+ + +Y + ++ + L + + Sbjct: 249 ETITLYNSLVNTGFKNIRYIDFGGGLAYPYVEASDHMFSSNYSLNEYAEILVKEVVESAE 308 Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265 I E G IV T ++D S Sbjct: 309 NIPGIVFEGGRYIVAPHRITVTKIIDTRPYSTPEDDETSYP 349 >gi|146300561|ref|YP_001195152.1| Orn/DAP/Arg decarboxylase 2 [Flavobacterium johnsoniae UW101] gi|146154979|gb|ABQ05833.1| Orn/DAP/Arg decarboxylase 2 [Flavobacterium johnsoniae UW101] Length = 467 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 52/408 (12%), Positives = 109/408 (26%), Gaps = 63/408 (15%) Query: 3 KTPY-YLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMD 53 TP + ++ N++ + + K + + + Sbjct: 42 GTPLKFTY-LPQISENINKAKSWFRKAMEKNKYEAKYYYCYCTKSSHFEYIMNEAFKNNI 100 Query: 54 GTTSSSLYEVMLG---HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 +SS ++V + E Y + + + + I + + + Sbjct: 101 HIETSSAFDVNIVENLLENGKINKSTYVICNGFKRDEYISNIARLINNGHKNTIPIIDNY 160 Query: 111 A--------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNG 160 K KIG+RI + K E++ + Sbjct: 161 EELDLLQGEIKGKFKIGIRIAAEEEPKFEFYTSRLGIGYKNIVSFYKKQIQENDKLELKM 220 Query: 161 LMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDK---DYPVKDF 214 L F N + L ++ +++GGG + +Y + Sbjct: 221 LHFFINTGINDTSYYWNELVKCIKVYIALKKECPTLDGLNIGGGFPIKNSLAFEYDYQYM 280 Query: 215 CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSV 265 + + I+ E G V + +L + ++DSS Sbjct: 281 IDEIINQIKIACEEAEVDVPNIFTEFGSFTVGESGGAIYQILYQKQQNDREKWNMIDSSF 340 Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEK 310 +PD + A N ++ G +C + D +++ EK Sbjct: 341 ITTLPDTWAINKRFIMLAINRWNDTYERVLLGGLTCDSDDYYNSEQNMNAIYLPKYNKEK 400 Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353 P+ IG F + Y + G I P + + D Sbjct: 401 PLYIG----FFNTGAYQETIG-GYGGLHHCLIPQPKHILIDRDENGIL 443 >gi|3421194|gb|AAC68529.1| arginine decarboxylase [Capsella bursa-pastoris] Length = 405 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 31/245 (12%), Positives = 73/245 (29%), Gaps = 28/245 (11%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +KC + + + ++ G + S E++L + +K Sbjct: 1 YQGVYPVKCNQDRFIIEDIVEFGSSFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DSEYISLALFGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTIQILRVVRKLRQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + + + Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYA-AAVVASVRFVCDQKSV 238 Query: 244 LNTTV 248 + + Sbjct: 239 KHPVI 243 >gi|262340848|ref|YP_003283703.1| arginine decarboxylase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272185|gb|ACY40093.1| arginine decarboxylase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 463 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 68/243 (27%), Gaps = 40/243 (16%) Query: 147 CKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIH 203 + + L F N K + L + +++ +++GGG Sbjct: 207 LNKIKNNPKVELKMLHFFINTGIKDTAYYWNELFKCLHIYAGLKKIAPELDILNIGGGFP 266 Query: 204 FTDKD---YPVKDFCQRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLD--I 251 Y + + +K+ IY E G V + + +L Sbjct: 267 IKTSMSFNYDYEYMANEIVYQIKKFCQEENVSDPHIYTEFGAYTVGESGGILYKILSQKR 326 Query: 252 SENIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFH 307 + + ++DSS +PD A N + G +C + D + Sbjct: 327 QNDREKWNMIDSSFMTTLPDTWAISRRFIMMAINRWNDCYERVFLGGLTCDSDDYYNSEQ 386 Query: 308 FEK-----------PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTI 351 P+ IG F + Y + + G I P + N D Sbjct: 387 HMNAIYLPCFRKKTPLYIG----FFNTGAYQDTI-SGYGGVHHCLIPQPIHVLINHDEKN 441 Query: 352 KAI 354 + Sbjct: 442 NLV 444 >gi|302339741|ref|YP_003804947.1| arginine decarboxylase [Spirochaeta smaragdinae DSM 11293] gi|301636926|gb|ADK82353.1| arginine decarboxylase [Spirochaeta smaragdinae DSM 11293] Length = 639 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 83/300 (27%), Gaps = 48/300 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52 P L L + T + + +K + + + ++ Sbjct: 67 PVLLRFPDILGERIRTLNESFAKTMKQYEYRGAYRGVFPIKVNQQQQVIEEVVRFGGAYH 126 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105 G + S E+++ ET YKD E + ++ +++ Sbjct: 127 HGLEAGSKPELLIALGMVRDPETPIICNGYKDEEFVDLALYGVKMGLQVILVIEQPGEIS 186 Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK-------- 156 +++KL + L + S A+ S G +++ + Sbjct: 187 TIIRRSKKLGIEPTLGLRVKLSSTVGGKWAESAGDHSVFGLTAGQLVDAIEELSRADMLG 246 Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207 + L +H + + H + ++ +GGG+ Sbjct: 247 TLRLLHYHLGSQIPNIRDIRSAVHEASRYYTALVHEGAPMGYLDIGGGLGVDYDGSRTTF 306 Query: 208 --------DYPVKDFCQRLKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 D D +K ++ + E G A V + L +LD++ Sbjct: 307 VSSKNYSLDEYCSDVVDVIKMVMDEAGVEHPTVVTESGRATVAYYSVLLFNILDVNSLHD 366 >gi|254508082|ref|ZP_05120209.1| arginine decarboxylase [Vibrio parahaemolyticus 16] gi|219549049|gb|EED26047.1| arginine decarboxylase [Vibrio parahaemolyticus 16] Length = 636 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 71/270 (26%), Gaps = 35/270 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + A L+ +K + D + + Sbjct: 61 PVLVRFPQILHQRVHGICDAFNQAIDEYQYTNNYLLVYPIKVNQQKEVVDEILESQAQLE 120 Query: 54 ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N + L + I+ +S Sbjct: 121 TKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K + I ++ + + G + E Sbjct: 181 ELDLVLKEAKSLGVKPRMGIRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVIDRLREED 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 ++ + + FH + + E I++ +GGG+ Sbjct: 241 QLDALQLVHFHLGSQMANIRDIRNGVNESARFYCELRGMGADIQFFDIGGGLAVDYDG-T 299 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+ Sbjct: 300 RSQSSNSMNYGLIEYARNIVSTVGDVCQQY 329 >gi|221326500|gb|ACM17129.1| arginine decarboxylase [Solanum pennellii] gi|221326502|gb|ACM17130.1| arginine decarboxylase [Solanum pennellii] Length = 222 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLAFVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|269837390|ref|YP_003319618.1| alanine racemase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269786653|gb|ACZ38796.1| alanine racemase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 366 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 2/97 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP ++ + L N++ + GV + LK + + G T + L Sbjct: 7 LDTPCLVVHESILRRNVEEMAAFAREHGVAMRPHLKTHKTAEITRMQREAGAIGFTCAKL 66 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTI 96 E L + + +I +L+ D I Sbjct: 67 GEAEALADAGVLDDVLLAYQIVGEQKIRRLLALMDRI 103 >gi|63002634|dbj|BAD97829.1| arginine decarboxylase [Prunus persica] Length = 404 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 60/203 (29%), Gaps = 25/203 (12%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +KC + + + ++ G + S E++L E +K Sbjct: 1 YQGVYPVKCNQDRFVVEDIVRFGSPFRFGLEAGSKPELLLAMSCLCKGNPEALLICNGFK 60 Query: 83 DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-- 140 D E ++ + NTV L + ++ + L + P + + + F Sbjct: 61 DFEYISLALFARKLALNTVIVLEQEEELDVVIDLSKKLGVRPVIGARAKLKTKHSGHFGS 120 Query: 141 -----SRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIEK 184 + G + L FH + S + I Sbjct: 121 TSGEKGKFGLTTTQILRVVKKLDQLGLLDCFQLLHFHIGSQIPSTALLADGVSEAAQIYC 180 Query: 185 EFGHFITQIEWISLGGGIHFTDK 207 E +++I +GGG+ Sbjct: 181 ELVRLGAHMKFIDIGGGLGIDYD 203 >gi|213962635|ref|ZP_03390896.1| arginine decarboxylase [Capnocytophaga sputigena Capno] gi|213954630|gb|EEB65951.1| arginine decarboxylase [Capnocytophaga sputigena Capno] Length = 463 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 66/236 (27%), Gaps = 38/236 (16%) Query: 148 KDKIESEIKNVNGLMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHF 204 ++ ++ + L F N K + + + +++ +++GGG Sbjct: 208 REIKDNPKVRLKMLHFFINTGIKDNAYYWNELLKCLRVYIQLKKVAPELDSLNIGGGFPI 267 Query: 205 TDK---DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISEN 254 +Y + + I+ E G V ++ + Sbjct: 268 KSSLAFEYDYAYMVDEIIRQIKITCDQEKVPVPNIFTEFGSFTVGEAGGAIYEIMYQKQQ 327 Query: 255 IKN--LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDI------ 302 +++SS +PD + N ++ G +C D Sbjct: 328 NDREKWNMINSSFITTLPDSWAINKRFVLLPINRWNDEYERVLLGGLTCDGDDYYNSEQN 387 Query: 303 -----FGEFHFEKPVKIGDRISFEDVAGY----NINRKNWFNGINMPTIAVKNVDG 349 +++ KP+ IG F + Y I P I + + D Sbjct: 388 MNAIYLPKYNKNKPLYIG----FFNTGAYQDSIGGVGGLQHCLIPQPKIVLIDKDK 439 >gi|209574004|gb|ACI62940.1| arginine decarboxylase SpeA [Acidithiobacillus thiooxidans] Length = 634 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 83/295 (28%), Gaps = 46/295 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P L Q L + ++ A + +K + + + + Sbjct: 66 PCLLRFPQILGHRVEKLRGAFTTAMQDTRYQGDYTPVYPIKVNQQRRVVEEILRAGSGNV 125 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 G + S E++ YKD E + + + + + K + Sbjct: 126 GLEAGSKPELLAVLGLMPVGGTVICNGYKDREYIRLALSGEKLGLRVYLVVEKISELPLI 185 Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEIK--------NV 158 L + + + P + S + S+ G ++ ++ Sbjct: 186 LSESRDIGVQPRIGVRARLASAGAGKWQNTGGEKSKFGLSTAHILDLLEHLRRENALQSL 245 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK-------- 207 L FH + + ++ + E +E + +GGG+ + Sbjct: 246 QLLHFHLGSQIPNIQFIKGGMRECARLYAELRRLGAALEVVDVGGGLGVDYEGTHSRAYC 305 Query: 208 -------DYPVKDFCQRLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISE 253 DY + ++ + ++ E G A+ + L T V D+ Sbjct: 306 STNYHVSDYAHAIVSALAEVSRQENLPEPHVVSESGRALTAHHAILLTNVTDVEM 360 >gi|315658302|ref|ZP_07911174.1| diaminopimelate decarboxylase [Staphylococcus lugdunensis M23590] gi|315496631|gb|EFU84954.1| diaminopimelate decarboxylase [Staphylococcus lugdunensis M23590] Length = 67 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 16/42 (38%), Gaps = 2/42 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAW 42 TP + D+ ++ + + K +G + A K F Sbjct: 26 GTPTIVYDEDQIRHQMRRYHSAFKQSGLTYNISYASKAFTCL 67 >gi|221326494|gb|ACM17126.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILH 214 >gi|315127025|ref|YP_004069028.1| arginine decarboxylase [Pseudoalteromonas sp. SM9913] gi|315015539|gb|ADT68877.1| arginine decarboxylase [Pseudoalteromonas sp. SM9913] Length = 637 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 83/303 (27%), Gaps = 51/303 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + + + A L+ +K + + + Sbjct: 62 PALVRFPQILHHRVHSLCGAFNTAIESYGYPKDYLLVYPIKVNQQREVVEEIVASQAQVE 121 Query: 54 ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N + L + I+ +S Sbjct: 122 KKQLGLEAGSKPELLTVLALAEKTSAVIVCNGYKDKEYVRLALIGEKLGHKVYIVLEKLS 181 Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIE--------S 153 +L+ +A++L+ K + I S K S+ G + Sbjct: 182 ELDMVLSQAKELNVKPRIGIRVRLASQGKGKWQASGGEKSKFGLSASQVLYVVNRLKETD 241 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 ++ V + FH + + + E IE + +GGG+ Sbjct: 242 QLDLVQLVHFHLGSQMANIRDVRLGVSEAARFYCELRKLGAHIECLDVGGGLAVDYDGTR 301 Query: 208 -------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISE 253 +Y + ++ + Q E G A+ + L + V+ Sbjct: 302 SQSHNSMNYSLAEYANNIVYTIGDICKQYEQPFPTIISESGRALTAHHAVLISNVIGTET 361 Query: 254 NIK 256 Sbjct: 362 YTP 364 >gi|325971327|ref|YP_004247518.1| arginine decarboxylase [Spirochaeta sp. Buddy] gi|324026565|gb|ADY13324.1| arginine decarboxylase [Spirochaeta sp. Buddy] Length = 637 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 33/315 (10%), Positives = 83/315 (26%), Gaps = 40/315 (12%) Query: 18 LDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEKF-GG 72 L+ + + +K + + + +Y G + S E+++ Sbjct: 82 LNAIKDAGYQGTYRGVYPIKVNQQQQVVEEICKYGQQYHHGLETGSKAELIIALAHIDDP 141 Query: 73 ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------FKDKAQKLHKKIGLRINPSV 126 E + YKD E + + TV + +++ L K + + Sbjct: 142 EAYVICNGYKDEEYIDLALKGLQLGIQTVLVVEMPGEVGIILQRSRALGIKPNIGLRMKP 201 Query: 127 SYSKFILADPNRPFSR-LGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSA 177 S + G ++ + + + L +H + + Sbjct: 202 STMASGHWTDSGGDRSVFGLNTTQVVQVVDRLRKENMLDCLKLLHYHLGSQIPNIHDIRV 261 Query: 178 MLKNIEKEFG---HFITQIEWISLGGGIHFTDK--------------DYPVKDFCQRLKE 220 + + H + + +GGG+ D + + Sbjct: 262 GATEAARFYAGLVHEGAAMGLLDMGGGLAIDYDGSHSNSSNSRNYSTKEYCDDVVEEIMT 321 Query: 221 FSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277 ++ + E G A+V+ + L +LD + + + + L Sbjct: 322 ICKEENIPHPTLISESGRALVSYYSVLLMNILDTNVFWDGKNSEEDVYDDAMMPALENLL 381 Query: 278 SATIYPNTGPYTAMV 292 N + Sbjct: 382 YVRTMLNEKNAQECL 396 >gi|242399214|ref|YP_002994638.1| putative amino acid racemase [Thermococcus sibiricus MM 739] gi|242265607|gb|ACS90289.1| putative amino acid racemase [Thermococcus sibiricus MM 739] Length = 375 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 35/333 (10%), Positives = 87/333 (26%), Gaps = 15/333 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP ++D KL N+ K +L +K + + + + G ++ Sbjct: 7 LPTPLVVVDLDKLEFNIKEVAKEAKKHNKQLFPMVKTHKSVYVANLQKKAGAGGFLCGTI 66 Query: 61 YEVMLGHEKFGGE------THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E E GE + ++V A+ Sbjct: 67 DEAEALAEAGLGETLMLAYPIMDKENFSRVARLIEDGLRVIFRIDSVDAAEFLD--AELK 124 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + V ++ K+ E + + + Sbjct: 125 KRGLRAEFTIIVDTGGVRYGIEPEKVGNFAKRVKEYSNLEFVGIT-THPGHVYNATNPKE 183 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 A+ + K + + ++ I + + +Y + Sbjct: 184 VKAIAEQATKGMKIALRSLRQWNMNPEIVGIGSTPTFRFDIEEEIYTHLFPGNYVYYDRQ 243 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---QESATIYPNTGPYTAM 291 +A++ + L L I + ++ + LY + + Sbjct: 244 QALIFGSANLERCALTIFVTVTSIAERCGKRFGLINAGSLYFDKRGHEILGSFGQAVEYP 303 Query: 292 VCGRSCLAGDI-FGEFHFEKPVKIGDRI-SFED 322 L+ ++ + E VK+G++I + Sbjct: 304 RAKLIGLSQEVGKIDVTNEPDVKVGEKINVIPN 336 >gi|32266732|ref|NP_860764.1| arginine decarboxylase [Helicobacter hepaticus ATCC 51449] gi|32262783|gb|AAP77830.1| arginine decarboxylase [Helicobacter hepaticus ATCC 51449] Length = 617 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 91/300 (30%), Gaps = 49/300 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLNQYMD-- 53 P L + N +D ++A K + LK + + Q D Sbjct: 46 PLLLRFPHLIKNQVDKVFKAFESAIKEYSYKGKFKAVFPLKVNQMPNFVLPLVEQSQDKC 105 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106 G + S E++L +KD E+ A + + T+ +++L Sbjct: 106 YGLEAGSKSELILAMAYVNKNAPITVNGFKDKEMISLGFSAANMGHDITLTIEGLNELET 165 Query: 107 FKDKAQ---KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 + A+ + + IGLRI S I A S+ G + +E+ Sbjct: 166 IIEVAKELGEPYPNIGLRIRL-HSIGVGIWAKSGGINSKFGLTSTELLEAINMLEKEQLL 224 Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 + FH + + ++ +++GGG+ + Sbjct: 225 HKFTMIHFHIGSQMSDISPLKKAIREAGNIYAELRKKGAKNLQCVNIGGGLAVEYTQHEG 284 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 K+ C + + ++ I +E G I N L VL++ Sbjct: 285 KNSCNYTLSEFSGDVVFSLREIAKNKKEPEPDILIESGRFIAANHAVLIAPVLELFSQEY 344 >gi|62202126|gb|AAH92747.1| Zgc:110131 [Danio rerio] gi|182891682|gb|AAI64997.1| Zgc:110131 protein [Danio rerio] Length = 198 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 44/148 (29%), Gaps = 6/148 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62 K+ ++ D ++ ++ +K ++ + + L G S+ +E Sbjct: 37 KSAFFAADLGVIVQQQARWRNKMDQ--IRPFYTVKSNSSPVVVELLASLRTGFICSNKHE 94 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + L + K A N ++ + +++ K + K + Sbjct: 95 LDLVKGFGVSSQDIILGGTCKQLSHIKYAAKHNIPLLVCDNEAEMRKI-ARCHPKAKVLL 153 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC 147 L + S + L E+ Sbjct: 154 LLTSESCCEVCLRMCWRGLEQVLLLEEV 181 >gi|198283310|ref|YP_002219631.1| arginine decarboxylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667242|ref|YP_002425898.1| arginine decarboxylase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247831|gb|ACH83424.1| arginine decarboxylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519455|gb|ACK80041.1| arginine decarboxylase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 637 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 81/308 (26%), Gaps = 46/308 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P L Q L + + +A + +K + + + + Sbjct: 60 PCLLRFPQILGDRVARLHGAFGDAIRALDYKGSFTPVYPIKVNQQRRVVEEILRAGAGSV 119 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKF 107 G + S E++ YKD E L ++ S+L Sbjct: 120 GLEAGSKPELLAVIGLMPVGGTIICNGYKDKEYIRLALTGEKLGMQVYLVVEKPSELPLI 179 Query: 108 KDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NV 158 ++A +L K + + S + S+ G D +E + ++ Sbjct: 180 LNEASRLGVKPRIGVRARLASAGSGKWQNTGGEKSKFGLSTADILELVHRLRAENALDSL 239 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWIS-----------------L 198 L FH + + ++ + E +E + Sbjct: 240 QLLHFHLGSQIPNIQFIRGGMRECARLYAELRRLGAALEVVDVGGGLGVDYEGTHSRAYC 299 Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 H +D + + + +I E G A+ + L V D+ Sbjct: 300 STNYHVSDYAHAIVATLADVSRQEGLPEPRIISESGRALTAHHAILVANVSDVEMAAGEH 359 Query: 259 VIVDSSVE 266 S + Sbjct: 360 PPSTPSAD 367 >gi|323492818|ref|ZP_08097960.1| arginine decarboxylase [Vibrio brasiliensis LMG 20546] gi|323312889|gb|EGA66011.1| arginine decarboxylase [Vibrio brasiliensis LMG 20546] Length = 636 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 69/270 (25%), Gaps = 35/270 (12%) Query: 5 PYYLIDKQKLLNN----LDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + L+ +K + D + + Sbjct: 61 PVLVRFPQILHQRVHGICQAFNQAIEENQYQNNYLLVYPIKVNQQKEVVDEILESQAQLE 120 Query: 54 ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 121 TKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 181 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVIERLKQEQ 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 ++ + + FH + + E I + +GGG+ Sbjct: 241 QLDAMQLVHFHLGSQMANIRDIRNGVNESARFYCELRAMGADITYFDIGGGLAVDYDG-T 299 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 + +Y+ I G+ Sbjct: 300 RSQSSNSMNYGLIEYARNIVSTVGDVCQQY 329 >gi|327403924|ref|YP_004344762.1| Orn/DAP/Arg decarboxylase 2 [Fluviicola taffensis DSM 16823] gi|327319432|gb|AEA43924.1| Orn/DAP/Arg decarboxylase 2 [Fluviicola taffensis DSM 16823] Length = 465 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 82/316 (25%), Gaps = 39/316 (12%) Query: 87 DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEK 146 + + ++++ + KIG+RI R Sbjct: 146 IEDKRLNIIPVVDNTAEIHDLIAATGENELKIGIRIASEEEPKFEFYTSRLGIRYREIVP 205 Query: 147 CKDKIESEIKN--VNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGG 201 + + L F N + L + ++ +++GGG Sbjct: 206 FYKAFIQDNPRVQIKMLHFFINTGINDTSYYWNELTKCLRIYSDLKKVCPTLDSLNIGGG 265 Query: 202 IH----------FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 + + +R+ ++ IY E G V + VL Sbjct: 266 FPIKKSLAFEFDYAYMVREILMQVKRVCSDNDIPEPNIYTEFGSFTVGESGGAIFNVLHQ 325 Query: 252 SENIKN--LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIF-- 303 + ++DSS ++PD + A N ++ G +C + D + Sbjct: 326 KQQNDREKWNMIDSSFMTNLPDTWAINQRFIMLAINRWNDDYERVLLGGLTCDSDDYYNS 385 Query: 304 ---GEFHFEKPVKIGDRISF--EDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353 + + + Y F G I P + D K Sbjct: 386 EQHSNAIYLPKFDKNKPLYIGYFNTGAYQETIG-GFGGLKHCLIPEPKHVLIQRDEHGKI 444 Query: 354 I-----REFSYNDYYN 364 + E + D+ Sbjct: 445 VTELFSEEQTAEDFMR 460 >gi|221326302|gb|ACM17030.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 15/116 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDFAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN 105 + S E++L K E +KD + ++ + FNTV L Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDADYISLALVARKLQFNTVIVLE 160 >gi|78777330|ref|YP_393645.1| arginine decarboxylase [Sulfurimonas denitrificans DSM 1251] gi|78497870|gb|ABB44410.1| arginine decarboxylase [Sulfurimonas denitrificans DSM 1251] Length = 609 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 85/291 (29%), Gaps = 45/291 (15%) Query: 11 KQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYMD----GTTSSSLYE 62 K ++ + + + + LK + G + S E Sbjct: 56 KSQIRTLYNYFDKAIQQNNYQGSFNAVFPLKVNQFPHAIAAITSQGAQFNYGLEAGSKAE 115 Query: 63 VMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKLH- 115 ++L K + +KD E+ A + TI + +L + A++ Sbjct: 116 LILAMSKTPSGANITVNGFKDKEMITLGFIAAQSGHNITITIEGLGELETIIEVAKECKL 175 Query: 116 --KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHN 165 IG+R+ S I A ++ G + IE+ + ++ + FH Sbjct: 176 KVPNIGIRVRL-HSAGSGIWAKSGGMDAKFGLTSTEIIEAITLLREADLLDYLSMIHFHI 234 Query: 166 NCENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQR---- 217 + L+ + ++ I++GGG+ + + Sbjct: 235 GSQMSDIAPLKKALREAGNIYAELKKMGATKLNSINIGGGLAVEYDQHTHSNSRNYSIDE 294 Query: 218 -----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257 + I+ E G IV + L T VL++ Sbjct: 295 FSSSVVFLLGEIMNAKNVSHPDIFTESGRFIVASHAVLITPVLELFTQDFQ 345 Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 13/98 (13%) Query: 269 VPDYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIFG------EFHFEKPVKIGDR 317 +PDY + + P T A + +C + G + + + D Sbjct: 449 LPDYWGLNQHFPVMPLHHLNTTPLRAASLWDITCDSDGEIGFNPDKPLYLHDVNLDEEDY 508 Query: 318 -ISFEDVAGYNINRKNWFNGINMPTIA-VKNVDGTIKA 353 + F +V Y N P+ + + + Sbjct: 509 FLGFFNVGAYQETLGMNHNLFTHPSEYTIIIGENDYEI 546 >gi|221326214|gb|ACM16986.1| arginine decarboxylase [Solanum corneliomuelleri] Length = 222 Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 52/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQ 103 + S E++L K E +KD E L I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLHLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221326482|gb|ACM17120.1| arginine decarboxylase [Solanum peruvianum] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ + GLR +S + + G + Sbjct: 165 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221325932|gb|ACM16845.1| arginine decarboxylase [Solanum chilense] gi|221325956|gb|ACM16857.1| arginine decarboxylase [Solanum chilense] gi|221325960|gb|ACM16859.1| arginine decarboxylase [Solanum chilense] gi|221325962|gb|ACM16860.1| arginine decarboxylase [Solanum chilense] gi|221325964|gb|ACM16861.1| arginine decarboxylase [Solanum chilense] gi|221326140|gb|ACM16949.1| arginine decarboxylase [Solanum chilense] gi|221326142|gb|ACM16950.1| arginine decarboxylase [Solanum chilense] gi|221326144|gb|ACM16951.1| arginine decarboxylase [Solanum chilense] gi|221326244|gb|ACM17001.1| arginine decarboxylase [Solanum chilense] gi|221326246|gb|ACM17002.1| arginine decarboxylase [Solanum chilense] gi|221326300|gb|ACM17029.1| arginine decarboxylase [Solanum chilense] gi|221326378|gb|ACM17068.1| arginine decarboxylase [Solanum chilense] gi|221326380|gb|ACM17069.1| arginine decarboxylase [Solanum chilense] gi|221326404|gb|ACM17081.1| arginine decarboxylase [Solanum chilense] gi|221326424|gb|ACM17091.1| arginine decarboxylase [Solanum chilense] gi|221326428|gb|ACM17093.1| arginine decarboxylase [Solanum chilense] gi|221326432|gb|ACM17095.1| arginine decarboxylase [Solanum chilense] gi|221326436|gb|ACM17097.1| arginine decarboxylase [Solanum chilense] gi|221326440|gb|ACM17099.1| arginine decarboxylase [Solanum chilense] gi|221326442|gb|ACM17100.1| arginine decarboxylase [Solanum chilense] gi|221326448|gb|ACM17103.1| arginine decarboxylase [Solanum chilense] gi|221326464|gb|ACM17111.1| arginine decarboxylase [Solanum chilense] gi|221326472|gb|ACM17115.1| arginine decarboxylase [Solanum chilense] gi|221326474|gb|ACM17116.1| arginine decarboxylase [Solanum chilense] gi|221326488|gb|ACM17123.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ + GLR +S + + G + Sbjct: 165 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221326228|gb|ACM16993.1| arginine decarboxylase [Solanum habrochaites] gi|221326230|gb|ACM16994.1| arginine decarboxylase [Solanum habrochaites] gi|221326400|gb|ACM17079.1| arginine decarboxylase [Solanum habrochaites] gi|221326402|gb|ACM17080.1| arginine decarboxylase [Solanum habrochaites] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDVEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|269837824|ref|YP_003320052.1| alanine racemase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269787087|gb|ACZ39230.1| alanine racemase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 370 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 46/168 (27%), Gaps = 14/168 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60 + TP +ID + N+ KL K + + L G T + L Sbjct: 16 VDTPALVIDADAMERNIARMAAFFAERPAKLRPHAKTHKSPIIAHKQLEAGAVGITCAKL 75 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII----FNTVSQLNKFKDKAQKLHK 116 E E + N +I ++ + + + + A Sbjct: 76 GEAEALVEGGIKDILIANQIVGPVKIARLVRLARHANLAVAVDDLDNARQISEAAVAAGS 135 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH 164 + + + +V NR G + + + GL F Sbjct: 136 TVRVLVEVNVG--------MNRCGVEPGAPAVELAQRVAS-LPGLHFF 174 >gi|330963447|gb|EGH63707.1| arginine decarboxylase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 278 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 51/209 (24%), Gaps = 26/209 (12%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158 ++ A+ S + AD S+ G + + + Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFG 187 L FH + + + K + +G Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYG 278 >gi|169608606|ref|XP_001797722.1| hypothetical protein SNOG_07385 [Phaeosphaeria nodorum SN15] gi|160701681|gb|EAT84851.2| hypothetical protein SNOG_07385 [Phaeosphaeria nodorum SN15] Length = 708 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 57/212 (26%), Gaps = 13/212 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP ++D + N+ + GV + LK + + L G + L Sbjct: 352 LDTPSMIVDLDLMEANIKKLMERLLPTGVNIRPHLKTTKSALLAQRLVDAGAKGGCVAKL 411 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEID----AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + + F + I+ ++ D+ +K Sbjct: 412 SEAEVMCAKGFDDLLITCEIIGAPKVKRLAELFKKHKSIRIVVDSEVGARAINDELKKSG 471 Query: 116 KKIGLRINPSVSYSKFILADPNR-PFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + + P +L + V G H + Sbjct: 472 VDGRIAVLIDLDVGLHRTGIQPGEPALKLAACIAQLDHMALIGVQGYEGHLQHVHSFEER 531 Query: 175 FSAMLKNI------EKEFGHFITQIEWISLGG 200 + L+++ QI+ ++ GG Sbjct: 532 KAKCLESMQILTSTANALREAGHQIDVVTTGG 563 >gi|221325938|gb|ACM16848.1| arginine decarboxylase [Solanum peruvianum] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 52/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L + A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLKSLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221326486|gb|ACM17122.1| arginine decarboxylase [Solanum peruvianum] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221326292|gb|ACM17025.1| arginine decarboxylase [Solanum arcanum] gi|221326294|gb|ACM17026.1| arginine decarboxylase [Solanum arcanum] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221326286|gb|ACM17022.1| arginine decarboxylase [Solanum pennellii] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVKSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221326234|gb|ACM16996.1| arginine decarboxylase [Solanum pennellii] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYVVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221326200|gb|ACM16979.1| arginine decarboxylase [Solanum arcanum] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221326176|gb|ACM16967.1| arginine decarboxylase [Solanum lycopersicum] gi|221326178|gb|ACM16968.1| arginine decarboxylase [Solanum lycopersicum] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221326170|gb|ACM16964.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326240|gb|ACM16999.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326242|gb|ACM17000.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326248|gb|ACM17003.1| arginine decarboxylase [Solanum huaylasense] gi|221326250|gb|ACM17004.1| arginine decarboxylase [Solanum huaylasense] gi|221326282|gb|ACM17020.1| arginine decarboxylase [Solanum huaylasense] gi|221326332|gb|ACM17045.1| arginine decarboxylase [Solanum huaylasense] gi|221326384|gb|ACM17071.1| arginine decarboxylase [Solanum peruvianum] gi|221326386|gb|ACM17072.1| arginine decarboxylase [Solanum peruvianum] gi|221326414|gb|ACM17086.1| arginine decarboxylase [Solanum peruvianum] gi|221326484|gb|ACM17121.1| arginine decarboxylase [Solanum peruvianum] gi|221326496|gb|ACM17127.1| arginine decarboxylase [Solanum peruvianum] gi|221326498|gb|ACM17128.1| arginine decarboxylase [Solanum peruvianum] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221326146|gb|ACM16952.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221326024|gb|ACM16891.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326026|gb|ACM16892.1| arginine decarboxylase [Solanum pimpinellifolium] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221325950|gb|ACM16854.1| arginine decarboxylase [Solanum peruvianum] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDCAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221325934|gb|ACM16846.1| arginine decarboxylase [Solanum chilense] gi|221325936|gb|ACM16847.1| arginine decarboxylase [Solanum peruvianum] gi|221325940|gb|ACM16849.1| arginine decarboxylase [Solanum peruvianum] gi|221325942|gb|ACM16850.1| arginine decarboxylase [Solanum peruvianum] gi|221325944|gb|ACM16851.1| arginine decarboxylase [Solanum peruvianum] gi|221325946|gb|ACM16852.1| arginine decarboxylase [Solanum peruvianum] gi|221325948|gb|ACM16853.1| arginine decarboxylase [Solanum peruvianum] gi|221325952|gb|ACM16855.1| arginine decarboxylase [Solanum chilense] gi|221325958|gb|ACM16858.1| arginine decarboxylase [Solanum chilense] gi|221325966|gb|ACM16862.1| arginine decarboxylase [Solanum chilense] gi|221325968|gb|ACM16863.1| arginine decarboxylase [Solanum chilense] gi|221325972|gb|ACM16865.1| arginine decarboxylase [Solanum peruvianum] gi|221325974|gb|ACM16866.1| arginine decarboxylase [Solanum peruvianum] gi|221325976|gb|ACM16867.1| arginine decarboxylase [Solanum neorickii] gi|221325978|gb|ACM16868.1| arginine decarboxylase [Solanum neorickii] gi|221325980|gb|ACM16869.1| arginine decarboxylase [Solanum neorickii] gi|221325982|gb|ACM16870.1| arginine decarboxylase [Solanum neorickii] gi|221325984|gb|ACM16871.1| arginine decarboxylase [Solanum habrochaites] gi|221325986|gb|ACM16872.1| arginine decarboxylase [Solanum habrochaites] gi|221325988|gb|ACM16873.1| arginine decarboxylase [Solanum habrochaites] gi|221325990|gb|ACM16874.1| arginine decarboxylase [Solanum habrochaites] gi|221325992|gb|ACM16875.1| arginine decarboxylase [Solanum habrochaites] gi|221325994|gb|ACM16876.1| arginine decarboxylase [Solanum habrochaites] gi|221325996|gb|ACM16877.1| arginine decarboxylase [Solanum habrochaites] gi|221325998|gb|ACM16878.1| arginine decarboxylase [Solanum habrochaites] gi|221326000|gb|ACM16879.1| arginine decarboxylase [Solanum habrochaites] gi|221326002|gb|ACM16880.1| arginine decarboxylase [Solanum habrochaites] gi|221326004|gb|ACM16881.1| arginine decarboxylase [Solanum habrochaites] gi|221326006|gb|ACM16882.1| arginine decarboxylase [Solanum habrochaites] gi|221326008|gb|ACM16883.1| arginine decarboxylase [Solanum pennellii] gi|221326010|gb|ACM16884.1| arginine decarboxylase [Solanum pennellii] gi|221326016|gb|ACM16887.1| arginine decarboxylase [Solanum habrochaites] gi|221326018|gb|ACM16888.1| arginine decarboxylase [Solanum habrochaites] gi|221326028|gb|ACM16893.1| arginine decarboxylase [Solanum arcanum] gi|221326030|gb|ACM16894.1| arginine decarboxylase [Solanum arcanum] gi|221326032|gb|ACM16895.1| arginine decarboxylase [Solanum arcanum] gi|221326034|gb|ACM16896.1| arginine decarboxylase [Solanum arcanum] gi|221326044|gb|ACM16901.1| arginine decarboxylase [Solanum lycopersicum] gi|221326046|gb|ACM16902.1| arginine decarboxylase [Solanum lycopersicum] gi|221326050|gb|ACM16904.1| arginine decarboxylase [Solanum lycopersicum] gi|221326068|gb|ACM16913.1| arginine decarboxylase [Solanum habrochaites] gi|221326070|gb|ACM16914.1| arginine decarboxylase [Solanum habrochaites] gi|221326072|gb|ACM16915.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326074|gb|ACM16916.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326076|gb|ACM16917.1| arginine decarboxylase [Solanum neorickii] gi|221326078|gb|ACM16918.1| arginine decarboxylase [Solanum neorickii] gi|221326080|gb|ACM16919.1| arginine decarboxylase [Solanum neorickii] gi|221326082|gb|ACM16920.1| arginine decarboxylase [Solanum neorickii] gi|221326084|gb|ACM16921.1| arginine decarboxylase [Solanum neorickii] gi|221326086|gb|ACM16922.1| arginine decarboxylase [Solanum neorickii] gi|221326088|gb|ACM16923.1| arginine decarboxylase [Solanum neorickii] gi|221326090|gb|ACM16924.1| arginine decarboxylase [Solanum neorickii] gi|221326136|gb|ACM16947.1| arginine decarboxylase [Solanum arcanum] gi|221326138|gb|ACM16948.1| arginine decarboxylase [Solanum arcanum] gi|221326152|gb|ACM16955.1| arginine decarboxylase [Solanum habrochaites] gi|221326154|gb|ACM16956.1| arginine decarboxylase [Solanum habrochaites] gi|221326160|gb|ACM16959.1| arginine decarboxylase [Solanum pennellii] gi|221326162|gb|ACM16960.1| arginine decarboxylase [Solanum pennellii] gi|221326164|gb|ACM16961.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326166|gb|ACM16962.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326168|gb|ACM16963.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326172|gb|ACM16965.1| arginine decarboxylase [Solanum chmielewskii] gi|221326174|gb|ACM16966.1| arginine decarboxylase [Solanum chmielewskii] gi|221326180|gb|ACM16969.1| arginine decarboxylase [Solanum neorickii] gi|221326182|gb|ACM16970.1| arginine decarboxylase [Solanum neorickii] gi|221326184|gb|ACM16971.1| arginine decarboxylase [Solanum chmielewskii] gi|221326186|gb|ACM16972.1| arginine decarboxylase [Solanum chmielewskii] gi|221326196|gb|ACM16977.1| arginine decarboxylase [Solanum huaylasense x Solanum peruvianum] gi|221326198|gb|ACM16978.1| arginine decarboxylase [Solanum huaylasense x Solanum peruvianum] gi|221326202|gb|ACM16980.1| arginine decarboxylase [Solanum arcanum] gi|221326204|gb|ACM16981.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326206|gb|ACM16982.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326212|gb|ACM16985.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326220|gb|ACM16989.1| arginine decarboxylase [Solanum arcanum] gi|221326222|gb|ACM16990.1| arginine decarboxylase [Solanum arcanum] gi|221326232|gb|ACM16995.1| arginine decarboxylase [Solanum pennellii] gi|221326236|gb|ACM16997.1| arginine decarboxylase [Solanum pennellii] gi|221326238|gb|ACM16998.1| arginine decarboxylase [Solanum pennellii] gi|221326252|gb|ACM17005.1| arginine decarboxylase [Solanum arcanum x Solanum peruvianum] gi|221326254|gb|ACM17006.1| arginine decarboxylase [Solanum arcanum x Solanum peruvianum] gi|221326256|gb|ACM17007.1| arginine decarboxylase [Solanum habrochaites] gi|221326258|gb|ACM17008.1| arginine decarboxylase [Solanum habrochaites] gi|221326268|gb|ACM17013.1| arginine decarboxylase [Solanum arcanum] gi|221326270|gb|ACM17014.1| arginine decarboxylase [Solanum arcanum] gi|221326272|gb|ACM17015.1| arginine decarboxylase [Solanum habrochaites] gi|221326274|gb|ACM17016.1| arginine decarboxylase [Solanum habrochaites] gi|221326276|gb|ACM17017.1| arginine decarboxylase [Solanum neorickii] gi|221326278|gb|ACM17018.1| arginine decarboxylase [Solanum neorickii] gi|221326280|gb|ACM17019.1| arginine decarboxylase [Solanum huaylasense] gi|221326284|gb|ACM17021.1| arginine decarboxylase [Solanum pennellii] gi|221326288|gb|ACM17023.1| arginine decarboxylase [Solanum habrochaites] gi|221326290|gb|ACM17024.1| arginine decarboxylase [Solanum habrochaites] gi|221326296|gb|ACM17027.1| arginine decarboxylase [Solanum chilense] gi|221326298|gb|ACM17028.1| arginine decarboxylase [Solanum chilense] gi|221326308|gb|ACM17033.1| arginine decarboxylase [Solanum chmielewskii] gi|221326310|gb|ACM17034.1| arginine decarboxylase [Solanum chmielewskii] gi|221326312|gb|ACM17035.1| arginine decarboxylase [Solanum chmielewskii] gi|221326314|gb|ACM17036.1| arginine decarboxylase [Solanum chmielewskii] gi|221326316|gb|ACM17037.1| arginine decarboxylase [Solanum neorickii] gi|221326318|gb|ACM17038.1| arginine decarboxylase [Solanum neorickii] gi|221326324|gb|ACM17041.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326326|gb|ACM17042.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326328|gb|ACM17043.1| arginine decarboxylase [Solanum huaylasense] gi|221326334|gb|ACM17046.1| arginine decarboxylase [Solanum huaylasense] gi|221326336|gb|ACM17047.1| arginine decarboxylase [Solanum arcanum] gi|221326338|gb|ACM17048.1| arginine decarboxylase [Solanum arcanum] gi|221326340|gb|ACM17049.1| arginine decarboxylase [Solanum pennellii] gi|221326342|gb|ACM17050.1| arginine decarboxylase [Solanum pennellii] gi|221326344|gb|ACM17051.1| arginine decarboxylase [Solanum peruvianum] gi|221326346|gb|ACM17052.1| arginine decarboxylase [Solanum peruvianum] gi|221326348|gb|ACM17053.1| arginine decarboxylase [Solanum chmielewskii] gi|221326350|gb|ACM17054.1| arginine decarboxylase [Solanum chmielewskii] gi|221326352|gb|ACM17055.1| arginine decarboxylase [Solanum chmielewskii] gi|221326354|gb|ACM17056.1| arginine decarboxylase [Solanum chmielewskii] gi|221326356|gb|ACM17057.1| arginine decarboxylase [Solanum chmielewskii] gi|221326358|gb|ACM17058.1| arginine decarboxylase [Solanum chmielewskii] gi|221326360|gb|ACM17059.1| arginine decarboxylase [Solanum neorickii] gi|221326362|gb|ACM17060.1| arginine decarboxylase [Solanum neorickii] gi|221326364|gb|ACM17061.1| arginine decarboxylase [Solanum chmielewskii] gi|221326366|gb|ACM17062.1| arginine decarboxylase [Solanum chmielewskii] gi|221326368|gb|ACM17063.1| arginine decarboxylase [Solanum chmielewskii] gi|221326372|gb|ACM17065.1| arginine decarboxylase [Solanum chmielewskii] gi|221326374|gb|ACM17066.1| arginine decarboxylase [Solanum chmielewskii] gi|221326376|gb|ACM17067.1| arginine decarboxylase [Solanum chilense] gi|221326382|gb|ACM17070.1| arginine decarboxylase [Solanum chilense] gi|221326408|gb|ACM17083.1| arginine decarboxylase [Solanum peruvianum] gi|221326410|gb|ACM17084.1| arginine decarboxylase [Solanum peruvianum] gi|221326412|gb|ACM17085.1| arginine decarboxylase [Solanum peruvianum] gi|221326416|gb|ACM17087.1| arginine decarboxylase [Solanum pennellii] gi|221326418|gb|ACM17088.1| arginine decarboxylase [Solanum pennellii] gi|221326420|gb|ACM17089.1| arginine decarboxylase [Solanum pennellii] gi|221326422|gb|ACM17090.1| arginine decarboxylase [Solanum pennellii] gi|221326426|gb|ACM17092.1| arginine decarboxylase [Solanum chilense] gi|221326430|gb|ACM17094.1| arginine decarboxylase [Solanum chilense] gi|221326434|gb|ACM17096.1| arginine decarboxylase [Solanum chilense] gi|221326438|gb|ACM17098.1| arginine decarboxylase [Solanum chilense] gi|221326450|gb|ACM17104.1| arginine decarboxylase [Solanum chilense] gi|221326456|gb|ACM17107.1| arginine decarboxylase [Solanum chilense] gi|221326458|gb|ACM17108.1| arginine decarboxylase [Solanum chilense] gi|221326466|gb|ACM17112.1| arginine decarboxylase [Solanum chilense] gi|221326476|gb|ACM17117.1| arginine decarboxylase [Solanum chilense] gi|221326478|gb|ACM17118.1| arginine decarboxylase [Solanum chilense] gi|221326480|gb|ACM17119.1| arginine decarboxylase [Solanum peruvianum] gi|221326490|gb|ACM17124.1| arginine decarboxylase [Solanum chilense] gi|221326492|gb|ACM17125.1| arginine decarboxylase [Solanum chilense] gi|221326504|gb|ACM17131.1| arginine decarboxylase [Solanum peruvianum] gi|221326506|gb|ACM17132.1| arginine decarboxylase [Solanum peruvianum] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|256820695|ref|YP_003141974.1| Orn/DAP/Arg decarboxylase 2 [Capnocytophaga ochracea DSM 7271] gi|256582278|gb|ACU93413.1| Orn/DAP/Arg decarboxylase 2 [Capnocytophaga ochracea DSM 7271] Length = 463 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 84/322 (26%), Gaps = 46/322 (14%) Query: 70 FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 ETH +K + I + ++ K IG+RI Sbjct: 122 ISKETHILCNGFKRDAYIDGIADLINRGYHNCIPIIDNYEEINLFEEKIKGSYSIGIRIA 181 Query: 124 PSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENK---SFLCFSAM 178 + ++ ++ + L F N K + Sbjct: 182 SEEDPRSEFYTSRLGIGYKNIVPFYNREIKDNPKVQLKMLHFFINTGIKDNAYYWNELLK 241 Query: 179 LKNIEKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + +++ +++GGG + + + + + Sbjct: 242 CLRVYIQLKKVAPELDSLNIGGGFPIKSSLAFEFDYAYMVDEIIRQIKITCDQEKVPVPN 301 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQES----ATIY 282 I+ E G V ++ + +++SS +PD + Sbjct: 302 IFTEFGSFTVGEAGGAIYEIMYQKQQNDREKWDMINSSFITTLPDSWAINKRFVLLPINR 361 Query: 283 PNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFEDVAGY----N 327 N ++ G +C D +++ KP+ IG F + Y Sbjct: 362 WNDEYERVLLGGLTCDGDDYYNSEQNMNAIYLPKYNKNKPLYIG----FFNTGAYQDSIG 417 Query: 328 INRKNWFNGINMPTIAVKNVDG 349 I P I + + D Sbjct: 418 GVGGLQHCLIPQPKIVLIDKDK 439 >gi|221326216|gb|ACM16987.1| arginine decarboxylase [Solanum neorickii] gi|221326218|gb|ACM16988.1| arginine decarboxylase [Solanum neorickii] Length = 222 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYVAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221326444|gb|ACM17101.1| arginine decarboxylase [Solanum lycopersicoides] gi|221326446|gb|ACM17102.1| arginine decarboxylase [Solanum lycopersicoides] gi|221326460|gb|ACM17109.1| arginine decarboxylase [Solanum lycopersicoides] gi|221326462|gb|ACM17110.1| arginine decarboxylase [Solanum lycopersicoides] gi|221326468|gb|ACM17113.1| arginine decarboxylase [Solanum lycopersicoides] gi|221326470|gb|ACM17114.1| arginine decarboxylase [Solanum lycopersicoides] Length = 222 Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|149376959|ref|ZP_01894713.1| arginine decarboxylase [Marinobacter algicola DG893] gi|149358736|gb|EDM47206.1| arginine decarboxylase [Marinobacter algicola DG893] Length = 636 Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 83/309 (26%), Gaps = 51/309 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-------N 49 P + L + ++ G + +K + + L + Sbjct: 61 PVLIRFTDILHDRVNKLCGAFNKVAREHGYQGGYTAVYPIKVNQQRRVVEELLCAEPAAS 120 Query: 50 QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E+M L + N I L + I+ S Sbjct: 121 DNQIGLEAGSKPELMAVLALSRQQESVIVCNGYKDREYIRLALIGQKLGHRVFIVVEKQS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEI------ 155 +L ++A++L + + ++ + S+ G ++ Sbjct: 181 ELPLILEEARRLGVTPLIGVRARLATIGKGNWQNTGGEKSKFGLSASQVLDVVETLHRAG 240 Query: 156 --KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 +++ L FH + + E H + + +GGG+ + Sbjct: 241 ALESLQLLHFHLGSQIANIRDIQTGLRECARFYSELRHMGAPVGTVDIGGGLGVDYEGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 + L+ ++ + E G A+ + + L T V+D Sbjct: 301 SRSSCSMNYSVHEYAYNVIHILQSECDRAGIPHPNLISESGRALTAHHSVLVTNVIDREV 360 Query: 254 NIKNLVIVD 262 K Sbjct: 361 PDKRPPEQP 369 >gi|315223822|ref|ZP_07865670.1| arginine decarboxylase [Capnocytophaga ochracea F0287] gi|314946152|gb|EFS98153.1| arginine decarboxylase [Capnocytophaga ochracea F0287] Length = 463 Score = 49.8 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 84/322 (26%), Gaps = 46/322 (14%) Query: 70 FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 ETH +K + I + ++ K IG+RI Sbjct: 122 ISKETHILCNGFKRDAYIDGIADLINRGYHNCIPIIDNYEEINLFEEKIKGSYSIGIRIA 181 Query: 124 PSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENK---SFLCFSAM 178 + ++ ++ + L F N K + Sbjct: 182 SEEDPRSEFYTSRLGIGYKNIVPFYNREIKDNPKVQLKMLHFFINTGIKDNAYYWNELLK 241 Query: 179 LKNIEKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + +++ +++GGG + + + + + Sbjct: 242 CLRVYIQLKKVAPELDSLNIGGGFPIKSSLAFEFDYAYMVDEIIRQIKITCDQEKVPVPN 301 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQES----ATIY 282 I+ E G V ++ + +++SS +PD + Sbjct: 302 IFTEFGSFTVGEAGGAIYEIMYQKQQNDREKWDMINSSFITTLPDSWAINKRFVLLPINR 361 Query: 283 PNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFEDVAGY----N 327 N ++ G +C D +++ KP+ IG F + Y Sbjct: 362 WNDEYERVLLGGLTCDGDDYYNSEQNMNAIYLPKYNKNKPLYIG----FFNTGAYQDSIG 417 Query: 328 INRKNWFNGINMPTIAVKNVDG 349 I P I + + D Sbjct: 418 GVGGLQHCLIPQPKIVLIDKDK 439 >gi|120599183|ref|YP_963757.1| arginine decarboxylase [Shewanella sp. W3-18-1] gi|146292747|ref|YP_001183171.1| arginine decarboxylase [Shewanella putrefaciens CN-32] gi|166220858|sp|A4Y5Y9|SPEA_SHEPC RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|166220860|sp|A1RKK8|SPEA_SHESW RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|120559276|gb|ABM25203.1| arginine decarboxylase [Shewanella sp. W3-18-1] gi|145564437|gb|ABP75372.1| arginine decarboxylase [Shewanella putrefaciens CN-32] gi|319426051|gb|ADV54125.1| arginine decarboxylase [Shewanella putrefaciens 200] Length = 637 Score = 49.8 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 80/324 (24%), Gaps = 51/324 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + +++ A L+ +K + + + Sbjct: 61 PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKE 120 Query: 54 ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108 G + S E+M + YKD E + + + L K Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180 Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153 + L + L + P + K S+ G + Sbjct: 181 ELKMVLAESKRLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILTVVDQLKQND 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + ++ L FH + + + E + +GGG+ Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRELGASVNCFDVGGGLAVDYDGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253 + L + +Y+ + E G + + L T V+ Sbjct: 301 SQSNNSMNYGLTEYANNIVNVLTDICNEYAQPMPRIISESGRYLTAHHAVLITDVIGTEA 360 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQE 277 + + + + + Sbjct: 361 YQPENIQPPAEESPQLLHNMWHSW 384 >gi|224135745|ref|XP_002327293.1| predicted protein [Populus trichocarpa] gi|222835663|gb|EEE74098.1| predicted protein [Populus trichocarpa] Length = 63 Score = 49.8 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 1/48 (2%) Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRIS-FEDVAGYNINRKNWFNGI 337 M+ SC + D+ +++ D I + + Y + FNG Sbjct: 1 MLFKPSCDSHDVSTSDEQMPELQVNDLIILYYYMGAYTTSAGTKFNGF 48 >gi|157962301|ref|YP_001502335.1| arginine decarboxylase [Shewanella pealeana ATCC 700345] gi|189046768|sp|A8H5G3|SPEA_SHEPA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|157847301|gb|ABV87800.1| arginine decarboxylase [Shewanella pealeana ATCC 700345] Length = 637 Score = 49.8 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 39/333 (11%), Positives = 93/333 (27%), Gaps = 59/333 (17%) Query: 1 MIKT----PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DT 47 M+K+ P + Q L + +++ A L+ +K + + Sbjct: 53 MVKSGVALPVLVRFPQILHHRVNSVCQAFNQAINKYQYENDYLLVYPIKVNQQQTVVEEI 112 Query: 48 LNQYMD------GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCD 94 L + G + S E+M + YKD E L + Sbjct: 113 LASQVAKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDKEYIRLALIGEKLGHKV 172 Query: 95 TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES 153 I+ +S+L ++A++L L + +++ + + G ++ Sbjct: 173 YIVLEKMSELKVVLEQAKELGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLQV 232 Query: 154 EI--------KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202 +++ L FH + + + E ++ +GGG+ Sbjct: 233 INSLKQENMLESLELLHFHLGSQIANIRDIRQGVSEAGRFYCELMKLGASVKCFDVGGGL 292 Query: 203 HFTDK--------------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLN 245 + L + ++Y + E G + + L Sbjct: 293 AVDYDGTRSQSSHSMNYGLTEYANNIVSVLTDMCKEYEQPMPRIISESGRYLTAHHAVLL 352 Query: 246 TTVLDISENIKNLVIVDSSVE----AHVPDYLL 274 T V+ + + ++ + Sbjct: 353 TDVIGTEAYKPEDIQPPAEDAPQLLHNMWQSWI 385 >gi|188586547|ref|YP_001918092.1| alanine racemase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351234|gb|ACB85504.1| alanine racemase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 362 Score = 49.8 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 37/333 (11%), Positives = 89/333 (26%), Gaps = 28/333 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D L N++ ++ + +K + +++ G T + Sbjct: 14 LPTPALLLDMSNLEYNINLLADFFRDKPCDIRPHMKGHKNLTIAHMQIDRGAIGVTCAKT 73 Query: 61 YEVMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E + + N + + + ++ A + Sbjct: 74 SEAEVMVNGGIKDILIANQVIESGKINLLAELARRADIKVAVDSYQNCENLSRIAVEHGV 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK-----S 171 IG+ + + L ++ + E + V G + + Sbjct: 134 TIGVLVEMDIG-LGRCGVKSFDEGINLVQEIQKLDNLEFRGVMGYEGPFRDKTQSEKSDM 192 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGG-GIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 + + +++ Q+E +S G G +YP Q + Sbjct: 193 VKESLSRVVQLKRRIEQENIQVEIVSCGSTGTWDITGNYPEITEIQAGTYPLMEVPYLED 252 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290 P + L + + + ++ + Q + P Sbjct: 253 GLP-----------FKSALSVLATVISKSHDKLILDCGLKAVTDDQGIPKLMDYDSP--- 298 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 + G I H + ++IGD+I Sbjct: 299 -IVG-INEEHSIVEIDHETEKLEIGDKIRILPA 329 >gi|156046673|ref|XP_001589715.1| hypothetical protein SS1G_09437 [Sclerotinia sclerotiorum 1980] gi|154693832|gb|EDN93570.1| hypothetical protein SS1G_09437 [Sclerotinia sclerotiorum 1980 UF-70] Length = 135 Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 38/132 (28%), Gaps = 1/132 (0%) Query: 36 LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD 94 +KC + + + L Q G +S+ E+ + + K E A Sbjct: 3 VKCNSDTVLLNVLMQLGAGFDCASVEEMHTVLSLGTHPSSINFANPCKAPESLAFAYKVG 62 Query: 95 TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE 154 + K + ++ LRI + S + L D + Sbjct: 63 IRKTTFDNLDELDNIKKYMPNAQLLLRIYANDSSAVVSLGDKYGAPLESCHALLVRAREL 122 Query: 155 IKNVNGLMFHNN 166 +V G FH Sbjct: 123 GMDVVGTTFHIG 134 >gi|221326260|gb|ACM17009.1| arginine decarboxylase [Solanum arcanum] gi|221326262|gb|ACM17010.1| arginine decarboxylase [Solanum arcanum] Length = 222 Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFG-STSGETGKFGLTTTQILR 214 >gi|220904174|ref|YP_002479486.1| arginine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868473|gb|ACL48808.1| arginine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 638 Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 80/291 (27%), Gaps = 47/291 (16%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYMD----GTTSSS 59 ++D ++ N ++ KN G +K + + + Q+ G S Sbjct: 74 ILD-SRIANIHESFRKAIKNLGYTGAYRGVFPIKVNQQQQVVEKIAQFGAQYHHGLEVGS 132 Query: 60 LYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--------FKDK 110 E++ E YKD E + + FN L + K Sbjct: 133 KAELIAAVSLMQDREACIVCNGYKDEEFMDLGLQALRMGFNVFFVLEMPSELNVLLERSK 192 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLM 162 A + IG+R +V D S G + + L Sbjct: 193 ALGVRPNIGVRAKLAVKAGGH-WTDSGGERSTFGLSPAQVVDVVDTLKSHDMLDCFKLLH 251 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207 +H + + + + ++ LGGG+ Sbjct: 252 YHLGSQVSNIRDIRTGVMEGARLYVGLIQEGAPMGYLDLGGGLAVDYDGSHTNFISSRNY 311 Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE 253 D D + + ++ I E G A V + L VLD+S Sbjct: 312 NLDEYCTDVVETIMSILDEENVPHPHIITESGRATVAYYSVLLFNVLDVSM 362 >gi|89899781|ref|YP_522252.1| alanine racemase-like protein [Rhodoferax ferrireducens T118] gi|89344518|gb|ABD68721.1| alanine racemase-like [Rhodoferax ferrireducens T118] Length = 379 Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 66/210 (31%), Gaps = 12/210 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60 ++TP ++D+ ++ N++ + GV +K + L + D T S+L Sbjct: 9 LETPALILDEARMDRNIERMRSHLRRLGVSFRPHVKTNKCIDVARRLLETPQDPITVSTL 68 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQKLH 115 E G + Y V ++D V++ D ++ +++ ++A+ Sbjct: 69 LEAEY-FAAHGVKDILYAVCIAPNKLDHVMALQDKGVRLSLLLDSMETTRLLAERARATR 127 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN-----K 170 + + I + + +G + + +C + Sbjct: 128 RHFDVLIEIDSDGHRSGVTPDASELVEIGLFLESAGIPVKGVLTHAGSSYDCASIEAIRA 187 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGG 200 A + + +S+G Sbjct: 188 MAEQERAAVVLAAQRLRAAGIACPVVSMGS 217 >gi|90410123|ref|ZP_01218140.1| biosynthetic arginine decarboxylase [Photobacterium profundum 3TCK] gi|90329476|gb|EAS45733.1| biosynthetic arginine decarboxylase [Photobacterium profundum 3TCK] Length = 640 Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 81/298 (27%), Gaps = 51/298 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-------N 49 P + L N +D+ + + +K + + Sbjct: 61 PVLVRFPDILQNRVDSLCSAFNQSIESYDYQNSYLAVYPIKVNQQQAVVSEILKSQYAKQ 120 Query: 50 QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 Q G + S E+M L + N I L + I+ +S Sbjct: 121 QRQLGLEAGSKPELMAVLAMAQEASSVIVCNGYKDREYIRLALIGEKLGHEVYIVLEKMS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ES 153 +LN ++A++L L + S K S+ G + Sbjct: 181 ELNIILEEAKQLGVTPRLGLRARLASQGKGKWQSSGGEKSKFGLCASQVLTVIDLLRERD 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + + L FH + + I E I + +GGG+ + Sbjct: 241 MLGCLQLLHFHLGSQLANIRDVRNGVGEAGRIYAELKKMGVGITTVDVGGGLAIDYEGTR 300 Query: 208 -------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDI 251 +Y + ++ + ++ E G + + L T V+ + Sbjct: 301 SQSSCSMNYNLSEYANNVVYTLGDVCIEYDIAMPRIISESGRNLTAHHAVLITDVIGV 358 >gi|331005656|ref|ZP_08329023.1| Biosynthetic arginine decarboxylase [gamma proteobacterium IMCC1989] gi|330420514|gb|EGG94813.1| Biosynthetic arginine decarboxylase [gamma proteobacterium IMCC1989] Length = 655 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 87/306 (28%), Gaps = 48/306 (15%) Query: 11 KQKLLNNLD----TALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM----DGTTSS 58 + L + + K K +K + + ++ + G + Sbjct: 74 ENLLDHRISCLNIAFADAIKTLDYKSHYRGVFPIKVNQQHHVIEEISHFGGHYNHGLEAG 133 Query: 59 SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------KFKDKA 111 S E+++ + + YKD E + + + + +++ Sbjct: 134 SKAELIIALSHITDNDAYIICNGYKDSEFIDLGLHAIKLGVKCFFVIETPSELPIIIERS 193 Query: 112 QKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLM 162 ++L K L + S +D + S G + + + L Sbjct: 194 RELGVKPLLGVRLKLASKVDGHWSDDSGDRSIFGLNTMQLMRLIEQLTESKLLDCLQLLH 253 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207 FH + ++ E +++I LGGG+ Sbjct: 254 FHLGSQLPNIRNIRSGMLEACRYYIELVQEGVPLQYIDLGGGLAVDYDGSQSNNTHSMNY 313 Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262 + D + + E E + I E G A V ++ L +LD+S + Sbjct: 314 SLNEYCVDIVESIIEALEPHNIPHPVIITESGRATVAYSSVLLFNILDVSHFDPQPLPEH 373 Query: 263 SSVEAH 268 S H Sbjct: 374 LSASQH 379 >gi|221325954|gb|ACM16856.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVAIKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|163751586|ref|ZP_02158807.1| arginine decarboxylase [Shewanella benthica KT99] gi|161328498|gb|EDP99652.1| arginine decarboxylase [Shewanella benthica KT99] Length = 637 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 89/306 (29%), Gaps = 55/306 (17%) Query: 1 MIKT----PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTL 48 M+K+ P + Q L + + + + + L+ +K + + + Sbjct: 53 MVKSGVALPVLVRFPQILHHRVHSICHAFNLAIQKYQYESDYLLVYPIKVNQQKTVVEEI 112 Query: 49 -----NQYM--DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCD 94 ++ + G + S E+M + YKD E L + Sbjct: 113 LASQKSKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDVEYIRLALIGEKLGHKV 172 Query: 95 TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI-- 151 I+ +S+L +A+ L L + +++ + + G + Sbjct: 173 YIVLEKLSELKSILQEAKNLGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLTV 232 Query: 152 ------ESEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202 E+ + + L FH + + + E T ++ +GGG+ Sbjct: 233 IESLKDENMLDCLQLLHFHLGSQIANIRDIRQGVSEASRFYCELQKLGTNVKCFDVGGGL 292 Query: 203 HFTDK--------------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLN 245 + L + ++Y + E G + + L Sbjct: 293 AVDYDGTRSQSSNSMNYGLTEYANNIVSVLTDICKEYQQPMPQIISESGRYLTAHHAVLI 352 Query: 246 TTVLDI 251 + V+ Sbjct: 353 SDVIGT 358 >gi|320156083|ref|YP_004188462.1| biosynthetic arginine decarboxylase [Vibrio vulnificus MO6-24/O] gi|319931395|gb|ADV86259.1| biosynthetic arginine decarboxylase [Vibrio vulnificus MO6-24/O] Length = 636 Score = 49.4 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 35/316 (11%), Positives = 80/316 (25%), Gaps = 51/316 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + + A L+ +K + D + Sbjct: 61 PVLVRFPQILHQRVHSICDAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLE 120 Query: 54 ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 121 TKQLGLEAGSKPELLAVLAMAQHASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKMS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153 +L+ +A+ L L I ++ + + G + + Sbjct: 181 ELDLVLREAKSLGVTPRLGIRIRLASQGAGKWQASGGEKSKFGLSASQVLNVISRLKKEN 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 ++ + + FH + + E I + +GGG+ Sbjct: 241 QLDTLQLVHFHLGSQMANIRDVRNGVNESARFYCELRTLGANITYFDVGGGLAIDYDGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253 ++ + + + Y + E G ++ + L + V+ Sbjct: 301 SQSSNSMNYGLVEYARNIVNTVGDVCKDYKQPMPVIISESGRSLTAHHAVLISNVIGTET 360 Query: 254 NIKNLVIVDSSVEAHV 269 V + Sbjct: 361 YKPETVTEPEEDFPLL 376 >gi|297787810|pdb|3N2O|A Chain A, X-Ray Crystal Structure Of Arginine Decarboxylase Complexed Arginine From Vibrio Vulnificus gi|297787811|pdb|3N2O|B Chain B, X-Ray Crystal Structure Of Arginine Decarboxylase Complexed Arginine From Vibrio Vulnificus gi|297787812|pdb|3N2O|C Chain C, X-Ray Crystal Structure Of Arginine Decarboxylase Complexed Arginine From Vibrio Vulnificus gi|297787813|pdb|3N2O|D Chain D, X-Ray Crystal Structure Of Arginine Decarboxylase Complexed Arginine From Vibrio Vulnificus Length = 648 Score = 49.4 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 35/316 (11%), Positives = 80/316 (25%), Gaps = 51/316 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + + A L+ +K + D + Sbjct: 65 PVLVRFPQILHQRVHSICDAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLE 124 Query: 54 ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 125 TKQLGLEAGSKPELLAVLAMAQHASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKMS 184 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153 +L+ +A+ L L I ++ + + G + + Sbjct: 185 ELDLVLREAKSLGVTPRLGIRIRLASQGAGKWQASGGEKSKFGLSASQVLNVISRLKKEN 244 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 ++ + + FH + + E I + +GGG+ Sbjct: 245 QLDTLQLVHFHLGSQMANIRDVRNGVNESARFYCELRTLGANITYFDVGGGLAIDYDGTR 304 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253 ++ + + + Y + E G ++ + L + V+ Sbjct: 305 SQSSNSMNYGLVEYARNIVNTVGDVCKDYKQPMPVIISESGRSLTAHHAVLISNVIGTET 364 Query: 254 NIKNLVIVDSSVEAHV 269 V + Sbjct: 365 YKPETVTEPEEDFPLL 380 >gi|37680170|ref|NP_934779.1| arginine decarboxylase [Vibrio vulnificus YJ016] gi|326423989|ref|NP_761203.2| arginine decarboxylase [Vibrio vulnificus CMCP6] gi|46397728|sp|Q7MK24|SPEA_VIBVY RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|37198916|dbj|BAC94750.1| arginine decarboxylase [Vibrio vulnificus YJ016] gi|319999367|gb|AAO10730.2| arginine decarboxylase [Vibrio vulnificus CMCP6] Length = 640 Score = 49.4 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 35/316 (11%), Positives = 80/316 (25%), Gaps = 51/316 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + + A L+ +K + D + Sbjct: 65 PVLVRFPQILHQRVHSICDAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLE 124 Query: 54 ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 125 TKQLGLEAGSKPELLAVLAMAQHASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKMS 184 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153 +L+ +A+ L L I ++ + + G + + Sbjct: 185 ELDLVLREAKSLGVTPRLGIRIRLASQGAGKWQASGGEKSKFGLSASQVLNVISRLKKEN 244 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 ++ + + FH + + E I + +GGG+ Sbjct: 245 QLDTLQLVHFHLGSQMANIRDVRNGVNESARFYCELRTLGANITYFDVGGGLAIDYDGTR 304 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253 ++ + + + Y + E G ++ + L + V+ Sbjct: 305 SQSSNSMNYGLVEYARNIVNTVGDVCKDYKQPMPVIISESGRSLTAHHAVLISNVIGTET 364 Query: 254 NIKNLVIVDSSVEAHV 269 V + Sbjct: 365 YKPETVTEPEEDFPLL 380 >gi|113969899|ref|YP_733692.1| arginine decarboxylase [Shewanella sp. MR-4] gi|114047134|ref|YP_737684.1| arginine decarboxylase [Shewanella sp. MR-7] gi|123030693|sp|Q0HW78|SPEA_SHESR RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|123130514|sp|Q0HJY2|SPEA_SHESM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|113884583|gb|ABI38635.1| arginine decarboxylase [Shewanella sp. MR-4] gi|113888576|gb|ABI42627.1| arginine decarboxylase [Shewanella sp. MR-7] Length = 637 Score = 49.4 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 37/324 (11%), Positives = 78/324 (24%), Gaps = 55/324 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + +++ A L+ +K + + + Sbjct: 61 PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQKTVVEEILASQASKE 120 Query: 54 ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108 G + S E+M + YKD E + + + L K Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180 Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153 + L + L + P + K S+ G + Sbjct: 181 ELKMVLAESKRLGVKPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILTVVDQLKEND 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + ++ L FH + + + E I +GGG+ Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAARFYCELRELGASINCFDVGGGLAVDYDGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253 + L + +Y + E G + + L T V+ Sbjct: 301 SQSNNSMNYGLSEYANNIVNVLTDICNEYEQPMPRIISESGRHLTAHHAVLITDVIGTEA 360 Query: 254 NIKNLVIVDSSVE----AHVPDYL 273 + + ++ Sbjct: 361 YQVEDIQPPAEESPQLLHNMWQSW 384 >gi|24373435|ref|NP_717478.1| arginine decarboxylase [Shewanella oneidensis MR-1] gi|48474856|sp|Q8EFU5|SPEA_SHEON RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|24347716|gb|AAN54922.1|AE015630_4 biosynthetic arginine decarboxylase [Shewanella oneidensis MR-1] Length = 637 Score = 49.4 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 37/324 (11%), Positives = 77/324 (23%), Gaps = 55/324 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + +++ A L+ +K + + + Sbjct: 61 PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQKTVVEEILASQASKE 120 Query: 54 ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108 G + S E+M + YKD E + + + L K Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180 Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKIE--------S 153 + L + L + P + K S+ G + Sbjct: 181 ELKMVLAESKRLGVKPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILTVVDQLKQSD 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + ++ L FH + + + E I +GGG+ Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAARFYCELRELGASINCFDVGGGLAVDYDGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253 + L + +Y + E G + + L T V+ Sbjct: 301 SQSNNSMNYGLSEYANNIVNVLTDICNEYEQPMPRIISESGRHLTAHHAVLITDVIGTEA 360 Query: 254 NIKNLVIVDSSVE----AHVPDYL 273 + ++ Sbjct: 361 YQVEDIQPPEEESPQLLHNMWQSW 384 >gi|73950479|ref|XP_544447.2| PREDICTED: similar to Ornithine decarboxylase (ODC) [Canis familiaris] Length = 165 Score = 49.4 bits (116), Expect = 9e-04, Method: Composition-based stats. Identities = 16/164 (9%), Positives = 33/164 (20%), Gaps = 24/164 (14%) Query: 26 KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDC 84 V KC ++ + L G +S E+ Y K Sbjct: 18 APPRVLPFYVEKCNSSAWVLHVLASLGTGFDCASQLELEQVRGLGAAPSHIIYANPCKPV 77 Query: 85 EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLG 144 L +++ + K + + +L Sbjct: 78 SHIHTLPATGLVLWLWTQDNESILPLSAKFGAPL--------DVCEHLLG---------- 119 Query: 145 EKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188 V G FH ++ + + + Sbjct: 120 -----LARDLGLAVVGTSFHVGSHCQAAHSSMQAIADCRRVLEM 158 >gi|196018615|ref|XP_002118839.1| hypothetical protein TRIADDRAFT_9870 [Trichoplax adhaerens] gi|190578025|gb|EDV18675.1| hypothetical protein TRIADDRAFT_9870 [Trichoplax adhaerens] Length = 54 Score = 49.4 bits (116), Expect = 9e-04, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 17/54 (31%), Gaps = 1/54 (1%) Query: 35 ALKCFAAWGMFDTLNQYMDGTTSSSLYEVM-LGHEKFGGETHAYNVAYKDCEID 87 A+KC + TL +SL E+ + + + Y K Sbjct: 1 AMKCNNDPVLLRTLINLGVSFDCASLGEIQSIINAGVNPDRIIYANTIKAISHL 54 >gi|221326330|gb|ACM17044.1| arginine decarboxylase [Solanum huaylasense] Length = 222 Score = 49.4 bits (116), Expect = 9e-04, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 12/76 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE 68 + S E++L Sbjct: 105 FGLEAGSKPELLLAMS 120 >gi|237807154|ref|YP_002891594.1| arginine decarboxylase [Tolumonas auensis DSM 9187] gi|259511348|sp|C4L9A9|SPEA_TOLAT RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|237499415|gb|ACQ92008.1| arginine decarboxylase [Tolumonas auensis DSM 9187] Length = 635 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 30/266 (11%), Positives = 74/266 (27%), Gaps = 33/266 (12%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD-- 53 TP L + ++ + A + + +K + +++ + Sbjct: 60 TPVLLRFPDIIKTRINALFGAFEQAIQSYGYKGRYQCVYPIKVNQQNQVIESVTRAFADK 119 Query: 54 ---GTTSSSLYEVMLGHEKFG--GETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQ 103 G + S E++ G N + L + I+ S+ Sbjct: 120 PALGLEAGSKPELLAVLSHHHDLGSVIVCNGYKDREYVRHALLGSLLGHHVYIVVEKPSE 179 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SE 154 L D+A +L+ + + ++ + + G + + Sbjct: 180 LELILDEAARLNITPRIGVRARLASQGSGKWQASGGEKSKFGLNAAQILRLVERLREADK 239 Query: 155 IKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 + + + FH + + E H IE + +GGG+ + Sbjct: 240 LDCLQLVHFHLGSQIANIRDIQGGIRECGRFYAELRHLGANIEVVDVGGGLGVDYEGSRS 299 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAI 237 + C +Y+ + G+ Sbjct: 300 QSHCSA-NYNLREYANNVVWGIGDVC 324 >gi|307305223|ref|ZP_07584971.1| arginine decarboxylase [Shewanella baltica BA175] gi|306911526|gb|EFN41951.1| arginine decarboxylase [Shewanella baltica BA175] Length = 637 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 79/324 (24%), Gaps = 51/324 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + +++ A L+ +K + + + Sbjct: 61 PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKE 120 Query: 54 ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108 G + S E+M + YKD E + + + L K Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180 Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153 + L + L + P + K S+ G + Sbjct: 181 ELKMVLAESKRLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILLVVEQLKQND 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + ++ L FH + + + E + +GGG+ Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRALGASVNCFDVGGGLAVDYDGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253 + L + +Y + E G + + L T V+ Sbjct: 301 SQSNNSMNYGLTEYANNIVNVLTDICNEYEQPMPRIISESGRYLTAHHAVLITDVIGTEA 360 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQE 277 + + + + + Sbjct: 361 YQPEDIQPPAEESPQLLHNMWHSW 384 >gi|160874920|ref|YP_001554236.1| arginine decarboxylase [Shewanella baltica OS195] gi|189046766|sp|A9KY70|SPEA_SHEB9 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|160860442|gb|ABX48976.1| arginine decarboxylase [Shewanella baltica OS195] gi|315267156|gb|ADT94009.1| arginine decarboxylase [Shewanella baltica OS678] Length = 637 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 79/324 (24%), Gaps = 51/324 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + +++ A L+ +K + + + Sbjct: 61 PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKE 120 Query: 54 ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108 G + S E+M + YKD E + + + L K Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180 Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153 + L + L + P + K S+ G + Sbjct: 181 ELKMVLAESKRLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILLVVEQLKQND 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + ++ L FH + + + E + +GGG+ Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRALGASVNCFDVGGGLAVDYDGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253 + L + +Y + E G + + L T V+ Sbjct: 301 SQSNNSMNYGLTEYANNIVNVLTDICNEYEQPMPRIISESGRYLTAHHAVLITDVIGTEA 360 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQE 277 + + + + + Sbjct: 361 YQPEDIQPPAEESPQLLHNMWHSW 384 >gi|126173995|ref|YP_001050144.1| arginine decarboxylase [Shewanella baltica OS155] gi|153000286|ref|YP_001365967.1| arginine decarboxylase [Shewanella baltica OS185] gi|217973683|ref|YP_002358434.1| arginine decarboxylase [Shewanella baltica OS223] gi|304411455|ref|ZP_07393069.1| arginine decarboxylase [Shewanella baltica OS183] gi|166220855|sp|A3D3G2|SPEA_SHEB5 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|166220856|sp|A6WM65|SPEA_SHEB8 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|254772920|sp|B8EAI2|SPEA_SHEB2 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|125997200|gb|ABN61275.1| arginine decarboxylase [Shewanella baltica OS155] gi|151364904|gb|ABS07904.1| arginine decarboxylase [Shewanella baltica OS185] gi|217498818|gb|ACK47011.1| arginine decarboxylase [Shewanella baltica OS223] gi|304350310|gb|EFM14714.1| arginine decarboxylase [Shewanella baltica OS183] Length = 637 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 79/324 (24%), Gaps = 51/324 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + +++ A L+ +K + + + Sbjct: 61 PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKE 120 Query: 54 ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108 G + S E+M + YKD E + + + L K Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180 Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153 + L + L + P + K S+ G + Sbjct: 181 ELKMVLAESKRLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILLVVEQLKQND 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + ++ L FH + + + E + +GGG+ Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRALGASVNCFDVGGGLAVDYDGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253 + L + +Y + E G + + L T V+ Sbjct: 301 SQSNNSMNYGLTEYANNIVNVLTDICNEYEQPMPRIISESGRYLTAHHAVLITDVIGTEA 360 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQE 277 + + + + + Sbjct: 361 YQPEDIQPPAEESPQLLHNMWHSW 384 >gi|213410262|ref|XP_002175901.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] gi|212003948|gb|EEB09608.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] Length = 408 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 50/171 (29%), Gaps = 6/171 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS-L 60 I TP +++D++ + NN D L + G +K D Q S + Sbjct: 31 IPTPAFVVDQKVVKNNCDEMLKSIEATGALFRPHVKTHKCIEAMDLQLQGRVNAVVVSTI 90 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSN-----CDTIIFNTVSQLNKFKDKAQKLH 115 E + + Y + ++ + ++ + ++ ++ K AQK Sbjct: 91 REAIAVVASGKVDDILYGLPVCRSRLEELYELSKNVKSVRLLIDNLAHIDILKQFAQKHS 150 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166 K + + S I N+ G H Sbjct: 151 IKRPFSVFIKIDMGTSRAGLQVGSPELQDLIDTTLNASGIINLFGFYCHAG 201 >gi|260060980|ref|YP_003194060.1| arginine decarboxylase [Robiginitalea biformata HTCC2501] gi|88785112|gb|EAR16281.1| arginine decarboxylase [Robiginitalea biformata HTCC2501] Length = 487 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 48/406 (11%), Positives = 103/406 (25%), Gaps = 59/406 (14%) Query: 3 KTPY-YLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMD 53 +P + K+ N++ A A K K + + Sbjct: 42 GSPLKFTY-LPKISQNINRAKDWFAEAMEKHDYPGKYYYCYCTKSSHFRYVLHEALKNDI 100 Query: 54 GTTSSSLY-----EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108 +SS + E + T+ +K V + I + + Sbjct: 101 HIETSSAFDIDIVENLKAQGLISDRTYVICNGFK--REAYVDNIGRLINEGHRNCIPIID 158 Query: 109 DK--------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNV 158 + K+G+RI + +++ + Sbjct: 159 NYEELSLLDEVIDQPFKVGIRIASEEEPKFEFYTSRLGIGYKDIVPFYENQIRDNDKVEL 218 Query: 159 NGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FT 205 L F N + + L ++ +++GGG + Sbjct: 219 RMLHFFINTGIRDNAYYWNELNKCLKVYVRLKKLCPSLDSLNIGGGFPTKNSLSFQYDYA 278 Query: 206 DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDS 263 + + + E + I+ E G V + VL + ++DS Sbjct: 279 YMVDEIVNQIKLTCEEGDVPPPNIFTEFGSFTVGESGGAVYKVLYQKQQNDREKWNMIDS 338 Query: 264 SVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIF-----GEFHFEKPVKI 314 S +PD + + + ++ G +C + D + + Sbjct: 339 SFITTLPDSWAINKRFIMLSVNRWDDPYERVLLGGLTCDSDDYYNSQQDMNAIYLPKFHS 398 Query: 315 GD--RISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353 G I F + Y F G I P + + + + Sbjct: 399 GKPLYIGFFNTGAYQETIG-GFGGLHHCLIPQPKHLLIDREENGEV 443 >gi|117920071|ref|YP_869263.1| arginine decarboxylase [Shewanella sp. ANA-3] gi|166220859|sp|A0KVN8|SPEA_SHESA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|117612403|gb|ABK47857.1| arginine decarboxylase [Shewanella sp. ANA-3] Length = 637 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 75/302 (24%), Gaps = 51/302 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + +++ A L+ +K + + + Sbjct: 61 PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQKTVVEEILASQASKE 120 Query: 54 ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108 G + S E+M + YKD E + + + L K Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180 Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153 + L + L + P + K S+ G + E Sbjct: 181 ELKMVLAESKRLGVKPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILTVVDQLKQED 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + ++ L FH + + + E I +GGG+ Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAARFYCELRELGASINCFDVGGGLAVDYDGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253 + L + +Y + E G + + L T V+ Sbjct: 301 SQSNNSMNYGLSEYANNIVNVLTDICNEYEQPMPRIISESGRHLTAHHAVLITDVIGTEA 360 Query: 254 NI 255 Sbjct: 361 YQ 362 >gi|260769401|ref|ZP_05878334.1| biosynthetic arginine decarboxylase [Vibrio furnissii CIP 102972] gi|260614739|gb|EEX39925.1| biosynthetic arginine decarboxylase [Vibrio furnissii CIP 102972] gi|315181932|gb|ADT88845.1| biosynthetic arginine decarboxylase [Vibrio furnissii NCTC 11218] Length = 636 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L + A L+ +K + D + Sbjct: 61 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 120 Query: 54 ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N + L + I+ +S Sbjct: 121 TKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYMRLALIGEKLGHKVFIVLEKLS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 181 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVIERLKAEQ 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 ++ + + FH + + E QI++ +GGG+ Sbjct: 241 QLDALQLVHFHLGSQMANIRDVRNGVNEAARFYCELRELGAQIQYFDVGGGLAVDYDG-T 299 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I G+ Sbjct: 300 RSQSSNSMNYGLLEYARNIVNTVGDMCN 327 >gi|149912635|ref|ZP_01901169.1| arginine decarboxylase [Roseobacter sp. AzwK-3b] gi|149813041|gb|EDM72867.1| arginine decarboxylase [Roseobacter sp. AzwK-3b] Length = 628 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 41/338 (12%), Positives = 97/338 (28%), Gaps = 38/338 (11%) Query: 2 IKTPYYL----IDKQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM- 52 I+TP L + + + +G + +K + D + + Sbjct: 56 IQTPMVLRVTSYLEHAIQQINHGFRDAIERSGYRGTYRGVFPIKVNQQAQVVDRIVDFGR 115 Query: 53 ---DGTTSSSLYEVMLGHEK--FGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVS 102 G + S E+++ N + + +C I+ +V Sbjct: 116 SHDFGLEAGSKPELVIALAHKLARDALIVCNGVKDAEFVGLAIQSCKLGFNTVIVLESVM 175 Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 +++ + ++ L + L + + A + S G +E Sbjct: 176 EVDTVIETSRALGTEPMLGVRVKLTNQIGGNWAASSGDRSTFGMNTAQLVEVIDKLRDAG 235 Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYP 210 + H + + + F + + LGGG+ F Sbjct: 236 LLHCLMLQHSHLGSQVPDVNDVRRSVGEACRYFSEMKAEGAPLTHLDLGGGLGFDYTGE- 294 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL---DISENIKNLVIVDSSVEA 267 K + E+Y +E + + T++ + + +++ + +EA Sbjct: 295 KKASANSINYSIEEYCAN-IVETVGYAMDEAGIDHPTLVTESGRAVAASSSMLIFNVLEA 353 Query: 268 HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE 305 + D ++ + V G L+GD E Sbjct: 354 TLFDASEAPDAEPGDHHLVSDLIAVGGY--LSGDRLRE 389 >gi|73973286|ref|XP_852691.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Canis familiaris] Length = 194 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 36/122 (29%), Gaps = 4/122 (3%) Query: 6 YYLID-KQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 +Y+ D + L +L + A KC M TL ++ ++ Sbjct: 42 FYVTDPRDILKKHLRCLK---ALPRLIAFYAAKCNDNRTMVKTLAAIGTVFDFANKTKMQ 98 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 L FG E +V + +N +T I F A L I+ Sbjct: 99 LQQASFGAEELYIDVISVSFHAGSGCTNPETFIQTISDTCCIFDKGADVGFNMYLLDISG 158 Query: 125 SV 126 Sbjct: 159 GF 160 >gi|34391661|gb|AAN77734.1| arginine decarboxylase [Capsicum annuum] Length = 409 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 73/233 (31%), Gaps = 27/233 (11%) Query: 27 NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLG---HEKFGGETHAYNV 79 ++ + + +KC + + + ++ G + S E++L K + Sbjct: 1 DSHYQGVYPVKCNQDRFVVEDIVKFGSPYRFGLEAGSKPELLLAMNCLSKGSADALLVCN 60 Query: 80 AYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKF 131 +KD E ++ I+ +L+ D ++K+ IGLR +S Sbjct: 61 GFKDTEYISLALIARKLLLNTVIVLEQEEELDLVIDISRKMAVRPVIGLRAKLRTKHSGH 120 Query: 132 ILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + + G + + L FH + + + + Sbjct: 121 FGSTSGEKG-KFGLTTTQILRVVKKLEGSGMLDCLQLLHFHIGSQIPTTELLADGVGEAT 179 Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + + +++I +GGG+ D + E+Y+ + Sbjct: 180 QIYSELVRLGAGMKFIDIGGGLGIDYDGSKSSDSDVSVAYGIEEYASAVVQAV 232 >gi|56695514|ref|YP_165862.1| arginine decarboxylase [Ruegeria pomeroyi DSS-3] gi|56677251|gb|AAV93917.1| arginine decarboxylase [Ruegeria pomeroyi DSS-3] Length = 661 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 24/258 (9%), Positives = 66/258 (25%), Gaps = 29/258 (11%) Query: 19 DTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK- 69 D+ +G K +K + D + ++ G + S E+++ Sbjct: 110 DSFADAIARSGYKGAYRGVFPIKVNQQAQVIDRIVEFGHRYSYGLEAGSKPELVIALAHK 169 Query: 70 -FGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 N + + + I+ + + + ++L + L + Sbjct: 170 LATDALIVCNGVKDAEFVRLAILSRKLGFNTVIVLESPKEADTVIAVYEELGIEPLLGVR 229 Query: 124 PSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNVNGLMFHNNCENKSFLC 174 ++ + + G + I + H + Sbjct: 230 VKLTNQISGKWEESSGDRSSFGMNTDQLVRVVDKLRDAGLIHCLKLQHSHLGSQVPDVND 289 Query: 175 FSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231 + + F + + LGGG+ + + E+Y + Sbjct: 290 VRRAVGEACRYFTELSAEGVPLTHLDLGGGMGVDYTGE-KRATENSINYTVEEYCANVV- 347 Query: 232 EPGEAIVTNTTTLNTTVL 249 E + + T++ Sbjct: 348 ETVAYAMDEAGIDHPTIV 365 >gi|269961366|ref|ZP_06175731.1| biosynthetic arginine decarboxylase [Vibrio harveyi 1DA3] gi|269833917|gb|EEZ88011.1| biosynthetic arginine decarboxylase [Vibrio harveyi 1DA3] Length = 640 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 29/253 (11%), Positives = 66/253 (26%), Gaps = 31/253 (12%) Query: 18 LDTALYIRKN----AGVKLLLALKCFAAWGMFDT-------LNQYMDGTTSSSLYEVM-- 64 + L+ +K + D L G + S E++ Sbjct: 82 CQAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLENKQLGLEAGSKPELLAV 141 Query: 65 LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 L + G N + L + I+ +S+L+ ++A+ L Sbjct: 142 LALAQQGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVTPR 201 Query: 120 LRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNVNGLMFHNNCE-- 168 L + ++ + + G + E ++ + + FH + Sbjct: 202 LGLRIRLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREDKLDTMQLVHFHLGSQMA 261 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + E I++ +GGG+ + +Y+ Sbjct: 262 NIRDVRNGVNESARFYCELRAMGANIDYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYAR 320 Query: 228 QIYLEPGEAIVTN 240 I G+ Sbjct: 321 NIVNTVGDVCQQY 333 >gi|221326156|gb|ACM16957.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326158|gb|ACM16958.1| arginine decarboxylase [Solanum pimpinellifolium] Length = 222 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSVGYEAHYQGVYPVKCNQDRFVVEDIVKFGTGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|221325924|gb|ACM16841.1| arginine decarboxylase [Solanum lycopersicum] gi|221325926|gb|ACM16842.1| arginine decarboxylase [Solanum lycopersicum] gi|221325928|gb|ACM16843.1| arginine decarboxylase [Solanum lycopersicum] gi|221325930|gb|ACM16844.1| arginine decarboxylase [Solanum lycopersicum] gi|221326012|gb|ACM16885.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326014|gb|ACM16886.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326036|gb|ACM16897.1| arginine decarboxylase [Solanum lycopersicum x Solanum pimpinellifolium] gi|221326038|gb|ACM16898.1| arginine decarboxylase [Solanum lycopersicum x Solanum pimpinellifolium] gi|221326040|gb|ACM16899.1| arginine decarboxylase [Solanum lycopersicum] gi|221326042|gb|ACM16900.1| arginine decarboxylase [Solanum lycopersicum] gi|221326048|gb|ACM16903.1| arginine decarboxylase [Solanum lycopersicum] gi|221326052|gb|ACM16905.1| arginine decarboxylase [Solanum lycopersicum] gi|221326054|gb|ACM16906.1| arginine decarboxylase [Solanum lycopersicum] gi|221326056|gb|ACM16907.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326058|gb|ACM16908.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326060|gb|ACM16909.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326062|gb|ACM16910.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326064|gb|ACM16911.1| arginine decarboxylase [Solanum lycopersicum] gi|221326066|gb|ACM16912.1| arginine decarboxylase [Solanum lycopersicum] gi|221326092|gb|ACM16925.1| arginine decarboxylase [Solanum lycopersicum] gi|221326094|gb|ACM16926.1| arginine decarboxylase [Solanum lycopersicum] gi|221326096|gb|ACM16927.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326098|gb|ACM16928.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326100|gb|ACM16929.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326102|gb|ACM16930.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326104|gb|ACM16931.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326106|gb|ACM16932.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326108|gb|ACM16933.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326110|gb|ACM16934.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326112|gb|ACM16935.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326114|gb|ACM16936.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326116|gb|ACM16937.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326118|gb|ACM16938.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326120|gb|ACM16939.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326122|gb|ACM16940.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326124|gb|ACM16941.1| arginine decarboxylase [Solanum galapagense] gi|221326126|gb|ACM16942.1| arginine decarboxylase [Solanum galapagense] gi|221326128|gb|ACM16943.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326130|gb|ACM16944.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326132|gb|ACM16945.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326134|gb|ACM16946.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326148|gb|ACM16953.1| arginine decarboxylase [Solanum galapagense] gi|221326150|gb|ACM16954.1| arginine decarboxylase [Solanum galapagense] gi|221326188|gb|ACM16973.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326190|gb|ACM16974.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326192|gb|ACM16975.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326194|gb|ACM16976.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326208|gb|ACM16983.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326210|gb|ACM16984.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326224|gb|ACM16991.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326226|gb|ACM16992.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326264|gb|ACM17011.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326266|gb|ACM17012.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326304|gb|ACM17031.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326306|gb|ACM17032.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326320|gb|ACM17039.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326322|gb|ACM17040.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326388|gb|ACM17073.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326390|gb|ACM17074.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326392|gb|ACM17075.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326394|gb|ACM17076.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326396|gb|ACM17077.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326398|gb|ACM17078.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326452|gb|ACM17105.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326454|gb|ACM17106.1| arginine decarboxylase [Solanum pimpinellifolium] Length = 222 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGTGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|3421170|gb|AAC68522.1| arginine decarboxylase [Thlaspi arvense] Length = 407 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 34/277 (12%), Positives = 78/277 (28%), Gaps = 29/277 (10%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +K + + + ++ G + S E++L + +K Sbjct: 1 YQGVYPVKGNQDRFVVEDIVKFGSPFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTTQIVRVMRKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + V + + Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYAEAVVASVR--FVCDRRS 237 Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + V+ + + V A Sbjct: 238 VKHPVICSESGRAIVSHHSVLIFEAVSAVKPMAHHAN 274 >gi|3421174|gb|AAC68523.1| arginine decarboxylase [Eutrema salsugineum] Length = 407 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 34/277 (12%), Positives = 78/277 (28%), Gaps = 29/277 (10%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +K + + + ++ G + S E++L + +K Sbjct: 1 YQGVYPVKGNQDRFVVEDIVKFGSPFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTTQIVRVMRKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + V + + Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYAEAVVASVR--FVCDRRS 237 Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + V+ + + V A Sbjct: 238 VKHPVICSESGRAIVSHHSVLIFEAVSAVKPMAHHAN 274 >gi|303328270|ref|ZP_07358708.1| arginine 2-monooxygenase [Desulfovibrio sp. 3_1_syn3] gi|302861600|gb|EFL84536.1| arginine 2-monooxygenase [Desulfovibrio sp. 3_1_syn3] Length = 638 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 75/280 (26%), Gaps = 43/280 (15%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGH 67 + + T Y + GV +K + + + Q+ G S E++ Sbjct: 84 ESFRKAIKTLNYTGEYRGV---FPIKVNQQQQVVEKIAQFGAHYHHGLEVGSKAELIAAV 140 Query: 68 EKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------FKDKAQKLHKKIGL 120 E YKD E + + FN L ++A+ L + + Sbjct: 141 SLMRDTEACIVCNGYKDAEFIDLGLQALRLGFNVFFVLEMPGELDVLLERAKVLGVRPNI 200 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCE--- 168 + ++ D S G + + L +H + Sbjct: 201 GVRAKLAVKAGGHWTDSGGERSTFGLSPAQIVDVVDTLKAHDMLDCFRLLHYHLGSQVSN 260 Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------------DYPVKDF 214 + + + ++ LGGG+ D D Sbjct: 261 IRDIRTGVMEGARLYVGLVQEGAPMGYLDLGGGLAVDYDGSHTNYISSRNYNLDEYCADV 320 Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251 + + ++ I E G A V + L +LD+ Sbjct: 321 VEAIMSILDEQQVPHPHIITESGRATVAYYSVLLFNILDV 360 >gi|156977941|ref|YP_001448847.1| arginine decarboxylase [Vibrio harveyi ATCC BAA-1116] gi|156529535|gb|ABU74620.1| hypothetical protein VIBHAR_06737 [Vibrio harveyi ATCC BAA-1116] Length = 640 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 30/254 (11%), Positives = 65/254 (25%), Gaps = 33/254 (12%) Query: 18 LDTALYIRKN----AGVKLLLALKCFAAWGMFDT-------LNQYMDGTTSSSLYEVM-- 64 + L+ +K + D L G + S E++ Sbjct: 82 CQAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLENKQLGLEAGSKPELLAV 141 Query: 65 LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 L + G N + L + I+ +S+L+ ++A+ L Sbjct: 142 LALAQQGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVTPR 201 Query: 120 LRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKNVNG---------LMFHNNCE- 168 L + ++ + + G + S I + + FH + Sbjct: 202 LGLRIRLASQGAGKWQASGGEKSKFGLSASQVL-SVIDRLKCEDQLDTMQLVHFHLGSQM 260 Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + E I++ +GGG+ + +Y+ Sbjct: 261 ANIRDVRNGVNESARFYCELRAMGANIDYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYA 319 Query: 227 VQIYLEPGEAIVTN 240 I G+ Sbjct: 320 RNIVNTVGDVCQQY 333 >gi|326201060|ref|ZP_08190932.1| arginine decarboxylase [Clostridium papyrosolvens DSM 2782] gi|325988628|gb|EGD49452.1| arginine decarboxylase [Clostridium papyrosolvens DSM 2782] Length = 639 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 35/258 (13%), Positives = 71/258 (27%), Gaps = 34/258 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYM---- 52 P L + L + + A KL + +K + + + ++ Sbjct: 67 PVLLRFENLLDSQISFLNNSFNEAMHKLNYKGAYRGVYPIKVNQQQQVVEEVTRFGQRYH 126 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------ 105 G S E++ E YKD E + + F + Sbjct: 127 HGLEVGSKAELVAALSVMKDKEACLICNGYKDEEFIDLGLYSVKMGFKCFFVIEIPGELD 186 Query: 106 --KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------- 156 + +A + IG+RI S + S G I + Sbjct: 187 IVLERSRALGIKPNIGIRIKLSAKAGGH-WTESGGDRSIFGLNMSQVISMVDRLKEEGML 245 Query: 157 -NVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVK 212 ++ L +H + + + + + + + ++ LGGG+ Sbjct: 246 DSLKLLHYHLGSQIPNIRDIRSAVLEAARVYAELVKEGAPMGYLDLGGGLAVDYDGSNTN 305 Query: 213 DFCQRLKEFSEKYSVQIY 230 R E+Y + I Sbjct: 306 YTNSR-NYTVEEYCMDIV 322 >gi|48474851|sp|Q8DA54|SPEA_VIBVU RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC Length = 641 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 80/317 (25%), Gaps = 52/317 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLNQYMD-- 53 P + Q L + + A L+ +K + + L Sbjct: 65 PVLVRFPQILHQRVHSICDAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILAASQAQL 124 Query: 54 -----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTV 101 G + S E++ L + N I L + I+ + Sbjct: 125 ETKQLGLEAGSKPELLAVLAMAQHASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKM 184 Query: 102 SQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE-------- 152 S+L+ +A+ L L I ++ + + G + Sbjct: 185 SELDLVLREAKSLGVTPRLGIRIRLASQGAGKWQASGGEKSKFGLSASQVLNVISRLKKE 244 Query: 153 SEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-- 207 +++ + + FH + + E I + +GGG+ Sbjct: 245 NQLDTLQLVHFHLGSQMANIRDVRNGVNESARFYCELRTLGANITYFDVGGGLAIDYDGT 304 Query: 208 ------------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDIS 252 ++ + + + Y + E G ++ + L + V+ Sbjct: 305 RSQSSNSMNYGLVEYARNIVNTVGDVCKDYKQPMPVIISESGRSLTAHHAVLISNVIGTE 364 Query: 253 ENIKNLVIVDSSVEAHV 269 V + Sbjct: 365 TYKPETVTEPEEDFPLL 381 >gi|297193992|ref|ZP_06911390.1| LOW QUALITY PROTEIN: lysine/ornithine decarboxylase [Streptomyces pristinaespiralis ATCC 25486] gi|297152048|gb|EFH31498.1| LOW QUALITY PROTEIN: lysine/ornithine decarboxylase [Streptomyces pristinaespiralis ATCC 25486] Length = 79 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 15/41 (36%) Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342 + E ++ GD ++ D Y + +N + + Sbjct: 1 MLAEKRALPLLEPGDVVAALDTGAYYFSSHYGYNSLPRTAV 41 >gi|59714023|ref|YP_206798.1| arginine decarboxylase [Vibrio fischeri ES114] gi|59482271|gb|AAW87910.1| biosynthetic arginine decarboxylase, PLP-binding [Vibrio fischeri ES114] Length = 636 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 29/246 (11%), Positives = 70/246 (28%), Gaps = 27/246 (10%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDT-------LNQYMDGTTSSSLYEVM--LGHEK 69 + L+ +K + D L Q G + S E++ L + Sbjct: 83 QAIDEYQYENHYLLVYPIKVNQQKEVVDEILASQAQLEQKQLGLEAGSKPELLAVLALAQ 142 Query: 70 FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 N + L + I+ +S+L+ +A+ L K L + Sbjct: 143 KASSVIVCNGYKDREYVRLALIGEKLGHSVFIVLEKLSELDLVLSEAKALGVKPRLGLRI 202 Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNVNGLMFHNNCE---NKSF 172 ++ + + G + E ++ + + FH + + Sbjct: 203 RLASQGAGKWQASGGEKSKFGLSASQVLTVINRLKAEDQLDILELVHFHLGSQMANIRDV 262 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 + E +++++ +GGG+ + +Y+ I + Sbjct: 263 RNGVSEAARFYCELRDIGAKLKYLDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVMT 321 Query: 233 PGEAIV 238 G+ Sbjct: 322 IGDICQ 327 >gi|254511855|ref|ZP_05123922.1| arginine decarboxylase [Rhodobacteraceae bacterium KLH11] gi|221535566|gb|EEE38554.1| arginine decarboxylase [Rhodobacteraceae bacterium KLH11] Length = 629 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/316 (10%), Positives = 82/316 (25%), Gaps = 48/316 (15%) Query: 2 IKTPYYL----IDKQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM- 52 IKTP L + ++ + ++ G K +K + D + ++ Sbjct: 57 IKTPMVLRVSSYLEHEITHINESFAKAIARVGYKGAYRGVFPIKVNQQAQVIDRIVEFGK 116 Query: 53 ---DGTTSSSLYEVMLGHEK--FGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVS 102 G + S E+++ N + + + I+ + Sbjct: 117 KYNYGLEAGSKPELVVALAHRLARDALIVCNGVKDAEFVQLAILSRKIGFNTVIVLESPK 176 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI------ 155 + + + +L + L + ++ + + G + + Sbjct: 177 EADTVIEVYNELGIEPQLGVRVKLTNQISGKWEESSGDRSAFGMNTDQLVATVDKLQSAG 236 Query: 156 --KNVNGLMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY- 209 + H + + E + + LGGG+ Sbjct: 237 LLHCLKLQHSHLGSQVQDVNDVRRAVGEACRYYTELTREGVPLSHLDLGGGMGVDYTGEK 296 Query: 210 ----------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 V + + +E + E G A+V ++ L VL+ + Sbjct: 297 KAAENSINYTVEEYCANVVETVAYAMDEAETDHPTLVTESGRAVVATSSMLVFNVLESTL 356 Query: 254 NIKNLVIVDSSVEAHV 269 + H+ Sbjct: 357 YDAPTGPEVDPDDHHL 372 >gi|157375744|ref|YP_001474344.1| arginine decarboxylase [Shewanella sediminis HAW-EB3] gi|189046769|sp|A8FWJ3|SPEA_SHESH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|157318118|gb|ABV37216.1| arginine decarboxylase [Shewanella sediminis HAW-EB3] Length = 637 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 89/311 (28%), Gaps = 55/311 (17%) Query: 1 MIKT----PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMF-DT 47 M+K+ P + Q L + +++ + L+ +K + + Sbjct: 53 MVKSGVALPVLIRFPQILHHRVNSVCQAFNQAIQKYEYQSDYLLVYPIKVNQQQTVVEEI 112 Query: 48 LNQYMD------GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCD 94 L + G + S E+M + YKD E L + Sbjct: 113 LASQVSKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDVEYIRLALIGEKLGHKV 172 Query: 95 TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE- 152 I+ +S+L ++A+KL L +++ + + G + Sbjct: 173 YIVLEKLSELKIILEEAEKLGVTPRLGCRVRLAFQGKGKWQASGGEKSKFGLSASQVLTV 232 Query: 153 -------SEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202 + ++ L FH + + + E ++ +GGG+ Sbjct: 233 IDSLKQSQMLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELQKLGANVKCFDVGGGL 292 Query: 203 HFTDK----------DYPVKDFCQRL-------KEFSEKYSVQIYLEPGEAIVTNTTTLN 245 +Y + ++ + ++ +I E G + + L Sbjct: 293 AVDYDGTRSQSSSSMNYGLTEYANNIVSVLTDLCNEYKEPMPRIISESGRFLTAHHAVLI 352 Query: 246 TTVLDISENIK 256 T V+ Sbjct: 353 TDVIGTEAYKP 363 >gi|3421132|gb|AAC68510.1| arginine decarboxylase [Aethionema grandiflorum] Length = 407 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 34/277 (12%), Positives = 78/277 (28%), Gaps = 29/277 (10%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +K + + + ++ G + S E++L + +K Sbjct: 1 YQGVYPVKGNQDRFVVEDIVKFGSPFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTTQIVRVVRKLRQAGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + V + + Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYADAVVASVR--FVCDRKS 237 Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + V+ + + V A Sbjct: 238 VKHPVICSESGRAIVSHHSVLIFEAVSAAKPMAHHAN 274 >gi|197337800|ref|YP_002158519.1| arginine decarboxylase [Vibrio fischeri MJ11] gi|197315052|gb|ACH64501.1| arginine decarboxylase [Vibrio fischeri MJ11] Length = 636 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 29/246 (11%), Positives = 70/246 (28%), Gaps = 27/246 (10%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDT-------LNQYMDGTTSSSLYEVM--LGHEK 69 + L+ +K + D L Q G + S E++ L + Sbjct: 83 QAIDEYQYENHYLLVYPIKVNQQKEVVDEILASQAQLEQKQLGLEAGSKPELLAVLALAQ 142 Query: 70 FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 N + L + I+ +S+L+ +A+ L K L + Sbjct: 143 KASSVIVCNGYKDREYVRLALIGEKLGHSVFIVLEKLSELDLVLSEAKALGVKPRLGLRI 202 Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNVNGLMFHNNCE---NKSF 172 ++ + + G + E ++ + + FH + + Sbjct: 203 RLASQGAGKWQASGGEKSKFGLSASQVLTVINRLKAEDQLDILELVHFHLGSQMANIRDV 262 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 + E +++++ +GGG+ + +Y+ I + Sbjct: 263 RNGVSEAARFYCELRDIGAKLKYLDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVMT 321 Query: 233 PGEAIV 238 G+ Sbjct: 322 IGDICQ 327 >gi|119472547|ref|ZP_01614595.1| arginine decarboxylase [Alteromonadales bacterium TW-7] gi|119444871|gb|EAW26171.1| arginine decarboxylase [Alteromonadales bacterium TW-7] Length = 637 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 82/298 (27%), Gaps = 51/298 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFD-------TLN 49 P + Q L + + + A L+ +K + + L Sbjct: 62 PALVRFPQILHHRVHSLCGAFNTAIENYGYPKDYLLVYPIKVNQQREVVEEIVASQAELE 121 Query: 50 QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 + G + S E++ L + N + L + I+ +S Sbjct: 122 KKQLGLEAGSKPELLTVLAMAEKTSAVIVCNGYKDKEYVRLALIGEKLGHKVYIVLEKLS 181 Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK----- 156 +L+ +A+ L+ K + I S K S+ G + + Sbjct: 182 ELDMVLSQAKALNVKPRIGIRVRLASQGKGKWQASGGEKSKFGLSASQVLHVVNRLKEAG 241 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + + FH + + + E IE + +GGG+ Sbjct: 242 QLDLMQLVHFHLGSQMANIRDVRLGVSEAARFYCELRKLGASIECLDVGGGLAIDYDGTR 301 Query: 208 -------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDI 251 +Y + ++ + Q E G A+ + L + V+ Sbjct: 302 SQSHNSMNYSLAEYANNIVYTIGDTCKQYAQPMPTIISESGRALTAHHAVLISNVIGT 359 >gi|119775098|ref|YP_927838.1| arginine decarboxylase [Shewanella amazonensis SB2B] gi|166220854|sp|A1S712|SPEA_SHEAM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|119767598|gb|ABM00169.1| arginine decarboxylase [Shewanella amazonensis SB2B] Length = 636 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 83/298 (27%), Gaps = 51/298 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMF-DTLNQYMD-- 53 P + Q L + +D + + L+ +K + + L + Sbjct: 61 PVLVRFPQILHHRVDHLCQMFNQAIQKYEYQSDYLLVYPIKVNQQQTVVEEILASQVSKT 120 Query: 54 ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108 G + S E+M + YKD E + + + + L K Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDKEYIRLALIGEKLGHSVYIVLEKMS 180 Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153 + L + L + P + K S+ G + E Sbjct: 181 ELQMVLEESKKLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILKVVERLKDED 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 ++++ L FH + + E ++ +GGG+ Sbjct: 241 MLESLQLLHFHLGSQIANIRDIRHGVGEAARFYCELRKLGAKVNCFDVGGGLAVDYDGTR 300 Query: 208 -------DYPVKDFCQRL-------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251 +Y + ++ + +E+ +I E G + + L T V+ Sbjct: 301 SQSNNSMNYALAEYANNIVSVLTDVCNQNEQPMPRIISESGRYLTAHHAVLITDVIGT 358 >gi|256425177|ref|YP_003125830.1| Orn/DAP/Arg decarboxylase 2 [Chitinophaga pinensis DSM 2588] gi|256040085|gb|ACU63629.1| Orn/DAP/Arg decarboxylase 2 [Chitinophaga pinensis DSM 2588] Length = 465 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 89/297 (29%), Gaps = 39/297 (13%) Query: 93 CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN---RPFSRLGEKCKD 149 + + +L +K + K + F R L Sbjct: 152 NVIPVLDNKEELEDYKKFIRTKDKVKLGLRIAAEEEPTFDFYTSRLGIRSRDVLEFYVDK 211 Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD 206 +E + L F N K + + + + + +++ I++GGG Sbjct: 212 LKGNEKFELKMLHFFMNKGIKDDIYYWSQFNRVVNLYCQLKKICPELDSINVGGGFPIKH 271 Query: 207 K-------DYPVKDFCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLD--ISEN 254 +Y V + +K +K IY E G V + + +V+ + + Sbjct: 272 SLGFDYDYNYIVNEIVANIKSICKKNKVPVPDIYTEFGSFTVGESGAVIYSVVGEKMQND 331 Query: 255 IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEF---- 306 +N ++DSS +PD E + + G +C D + Sbjct: 332 RENWYMIDSSFITTLPDTWGIGEKFLMLPINKWDQEYQEVHLGGLTCDGYDFYTSEEHIN 391 Query: 307 -HFEKPVKIGD---RISFEDVAGYNINRKNWFNGINM-----PTIAVK--NVDGTIK 352 F + G+ I F Y + + GI P + + +G +K Sbjct: 392 AVFLPKL-AGEEPLYIGFFHTGAYQDQL-SGYGGIKHCLIPSPKHVIIGYDKNGQLK 446 >gi|163803240|ref|ZP_02197121.1| arginine decarboxylase [Vibrio sp. AND4] gi|159172995|gb|EDP57831.1| arginine decarboxylase [Vibrio sp. AND4] Length = 636 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 29/253 (11%), Positives = 66/253 (26%), Gaps = 31/253 (12%) Query: 18 LDTALYIRKN----AGVKLLLALKCFAAWGMFDT-------LNQYMDGTTSSSLYEVM-- 64 + L+ +K + D L G + S E++ Sbjct: 78 CQAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLENKQLGLEAGSKPELLAV 137 Query: 65 LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 L + G N + L + I+ +S+L+ ++A+ L Sbjct: 138 LALAQQGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVTPR 197 Query: 120 LRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNVNGLMFHNNCE-- 168 L + ++ + + G + E ++ + + FH + Sbjct: 198 LGLRIRLASQGAGKWQASGGEKSKFGLSASQVLSVIGRLKREDQLGTMQLVHFHLGSQMA 257 Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227 + E I++ +GGG+ + +Y+ Sbjct: 258 NIRDVRNGVNESARFYCELRAMGANIDYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYAR 316 Query: 228 QIYLEPGEAIVTN 240 I G+ Sbjct: 317 NIVNTVGDVCQQY 329 >gi|228472806|ref|ZP_04057564.1| arginine 2-monooxygenase [Capnocytophaga gingivalis ATCC 33624] gi|228275857|gb|EEK14623.1| arginine 2-monooxygenase [Capnocytophaga gingivalis ATCC 33624] Length = 463 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 29/237 (12%), Positives = 68/237 (28%), Gaps = 38/237 (16%) Query: 148 KDKIESEIKNVNGLMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH- 203 K+ +++ + L F N K + + + +++ +++GGG Sbjct: 208 KEIKDNKKVTLKMLHFFINTGIKDNAYYWNELLKCLKVYIQLKKVAPELDSLNIGGGFPI 267 Query: 204 ---------FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 + + + + + I+ E G V ++ + Sbjct: 268 KTSLAFEYDYAYMVDEIIRQIKIACDQEKVPVPNIFTEFGSFTVGEAGGAIYEIMYQKQQ 327 Query: 255 IKN--LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDI------ 302 +++SS +PD + N ++ G +C D Sbjct: 328 NDREKWNMINSSFITTLPDTWAINKRFVLLPINRWNDEYERVLLGGLTCDGDDYYNSEQN 387 Query: 303 -----FGEFHFEKPVKIGDRISFEDVAGY----NINRKNWFNGINMPTIAVKNVDGT 350 +++ KP+ IG F + Y I P I + + + Sbjct: 388 MNAIYLPKYNKNKPLYIG----FFNTGAYQDSIGGVGGLQHCLIPQPKIVLIDRNKD 440 >gi|220928548|ref|YP_002505457.1| arginine decarboxylase [Clostridium cellulolyticum H10] gi|219998876|gb|ACL75477.1| arginine decarboxylase [Clostridium cellulolyticum H10] Length = 639 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 84/312 (26%), Gaps = 50/312 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYM---- 52 P L + L + + A KL + +K + + + ++ Sbjct: 67 PVLLRFENLLDSQISFLNNSFNEAMHKLNYKGAYRGVYPIKVNQQQQVVEEVTRFGQRYH 126 Query: 53 DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------ 105 G S E++ E YKD E + + F + Sbjct: 127 HGLEVGSKAELVAALSVMKDKEACLICNGYKDEEFVDLGLYSVKMGFKCFFVIEIPGELD 186 Query: 106 --KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------- 156 + +A + IG+RI S + S G I + Sbjct: 187 IVLERSRALGVKPNIGIRIKLSAKAGGH-WTESGGDRSIFGLNMSQVISMVDRLKAEGML 245 Query: 157 -NVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK----- 207 ++ L +H + + + + + + + ++ LGGG+ Sbjct: 246 DSLKLLHYHLGSQIPNIRDIRSAVLEAARVYAELVKEGAPMGYLDLGGGLAVDYDGSNTN 305 Query: 208 ---------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255 + D + + + I E G V + L VLDI + Sbjct: 306 YTNSRNYTVEEYCSDIVEAVMTTLDSSDVPHPVIVTESGRTTVAYYSVLIFNVLDIEKFE 365 Query: 256 KNLVIVDSSVEA 267 ++ + Sbjct: 366 EHDIPDKLDENT 377 >gi|159901911|gb|ABX10644.1| alanine racemase [uncultured planctomycete 3FN] Length = 363 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 37/331 (11%), Positives = 83/331 (25%), Gaps = 29/331 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTS--S 58 I TP ID +L N+ T + G + KC + + G T Sbjct: 10 IDTPALCIDLNQLDANIKTMADFIISRGKQWRPHEKCHKTPAIALKQIAAGAIGVTCAKV 69 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S EVM A + + I + +Q+ ++ Sbjct: 70 SEAEVMAA-AGIHDILIANMIVGTPKWERVAALCRTTDVIIACDHFAQVEPLAAICRRNG 128 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 + + + ++ + L ++ + G H Sbjct: 129 VTCRVIVEVDIGLNRVGTRPGV-DTTELARSIHALDGLQLAGIMGYEGHLLTIADRDEKR 187 Query: 176 SAMLKNI----EKEFGHFITQIEWISL-GGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 + + + + + + GG + + Sbjct: 188 TKIAEAMNVLVHCRDELLGADLPCEIVSAGGTGSFQITSDCEGITELQAGGGIFADPHYQ 247 Query: 231 LEPGEAIVTNTTTLNTTVLDIS---ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287 + ++ T+ TV+ I + + H+ + A + + Sbjct: 248 THCDLQDLPSSLTVLATVVSRPSLERAILDAGRKSHHPDFHM-PIVKGHSDAEVVRVSAE 306 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 + + G + +KIGD+I Sbjct: 307 HCEVKLGP------------KAQDLKIGDKI 325 >gi|237750347|ref|ZP_04580827.1| arginine decarboxylase [Helicobacter bilis ATCC 43879] gi|229373877|gb|EEO24268.1| arginine decarboxylase [Helicobacter bilis ATCC 43879] Length = 616 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 86/290 (29%), Gaps = 45/290 (15%) Query: 11 KQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWG-MFDT--LNQYMD-GTTSSSLYE 62 + ++ D K + LK + L++ G + S E Sbjct: 56 ENQITKVYDAFHTAIKEYQYQGCFKAVFPLKVNQMPNFVLPLVELSKGKCYGLEAGSKSE 115 Query: 63 VMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 +++ + +KD E+ A + + T+ +++L + A ++ + Sbjct: 116 LIVAMAYTNKGSPITVNGFKDKEMISLGFIAANMGHDITLTIEGLNELKTIIEIASEMAE 175 Query: 117 KI---GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHN 165 GLRI S I A S+ G + +E+ + FH Sbjct: 176 PYPNIGLRIRL-HSVGTGIWAKSGGITSKFGLTSTELLEAMKMLEYSKLLHKFTMIHFHI 234 Query: 166 NCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQR---- 217 + ++ + + + +++GGG+ + + Sbjct: 235 GSQISDISPLKKAIREVGNIYAELRKMGAKNLTAVNIGGGLAVEYAQHESMNCKNYTLTE 294 Query: 218 -----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + + I++E G I + L VL++ Sbjct: 295 FSGDVVFSLKEIAKNKNELEPDIFIESGRFISASHAVLVAPVLELFSQEY 344 >gi|257462583|ref|ZP_05626993.1| alanine racemase, biosynthetic [Fusobacterium sp. D12] gi|317060235|ref|ZP_07924720.1| alanine racemase [Fusobacterium sp. D12] gi|313685911|gb|EFS22746.1| alanine racemase [Fusobacterium sp. D12] Length = 354 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 23/219 (10%), Positives = 56/219 (25%), Gaps = 15/219 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYMDGT-TSSSLYEV 63 ID + L +N+ + G+++ +K A + L + +SL E Sbjct: 7 IDTEHLRHNIREIQKRAE--GLEVCGVIKANAYGLGVLPVTKILEEEGIHFFAVASLEEA 64 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 GE + + ++A + I ++ +L A K+ I Sbjct: 65 KEVRSAGIAGEILILGSLFHEEILEAEEAGF-HINVSSREELEWISQHAPKVK------I 117 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + L + + K + + ++ ++ Sbjct: 118 HIKIDTGMTRLGFSYQEGRDILAFAKQLSLQISGIFSHFSDADGFSQEAQKYTETQIERF 177 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221 I G + + + Sbjct: 178 LPYANQKDIPYRHIFNSGALVQHRNQKIGNMVRAGICMY 216 >gi|328675673|gb|AEB28348.1| Biosynthetic arginine decarboxylase [Francisella cf. novicida 3523] Length = 550 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 31/273 (11%), Positives = 74/273 (27%), Gaps = 30/273 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG-- 54 P L + L N +D + A L +K + + Y Sbjct: 53 PLVLYFEHILKNQIDKLYNSFEKAISNLGYTGKYSLAYPIKVNPEQKIVKAIYDYHQHNQ 112 Query: 55 ----TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 + E++ +KD + I + + + + Sbjct: 113 ISLDYEVGTKSELLAVLSTATKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEI 172 Query: 111 AQK---LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLM 162 L + ++ + + F + F + + I N + L Sbjct: 173 NIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQKFGLSLSQINECINFLKTNQLQEKLVLLH 232 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDF 214 H + KS A ++ + K + ++++I GGG+ Y + Sbjct: 233 SHIGSQLKSTDKVVANIQRLIKIYSELKSDFIKLKYIDFGGGLAVNYDKYDRPSYDFDSY 292 Query: 215 CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT 247 + + + + Y+ + I + + Sbjct: 293 AETIVKNCKYYAEYYNCDMPNIITESGRAITAE 325 >gi|241668785|ref|ZP_04756363.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877316|ref|ZP_05250026.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843337|gb|EET21751.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 365 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 61/190 (32%), Gaps = 12/190 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYMDGTTSSSLYEVM 64 I KQ L NN+ K+ +K A + + + +D ++ E Sbjct: 6 ISKQTLRNNIKIIREYVG--NAKICFPVKANAYGHGIEEIVENTHDLVDFFAVANSLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + V Y + V N + + K + A++L+KKI + IN Sbjct: 64 RVTAITKKPVLVFGVIYYEYLERMVSEN-IRVSIQDYDDIEKLEQIAKELNKKIYVHINV 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + ++ + + K S+ + G+ H C + + K Sbjct: 123 NTGMNRMGVCYNDVC-----RTIKRAYNSKWVVLEGVYSHLACADNRDHPTNTKQKKRFS 177 Query: 185 EFGHFITQIE 194 E + ++ Sbjct: 178 EIVEYAKELS 187 >gi|170726410|ref|YP_001760436.1| arginine decarboxylase [Shewanella woodyi ATCC 51908] gi|226734334|sp|B1KRD4|SPEA_SHEWM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|169811757|gb|ACA86341.1| arginine decarboxylase [Shewanella woodyi ATCC 51908] Length = 637 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 67/245 (27%), Gaps = 38/245 (15%) Query: 1 MIKT----PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DT 47 M+K+ P + Q L + +++ A L+ +K + + Sbjct: 53 MVKSGVNLPVLVRFPQILHHRVNSLCQAFNQAIQKYQYQADYLLVYPIKVNQQQTVVEEI 112 Query: 48 LNQYM------DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNT 100 L + G + S E+M + YKD E + + + Sbjct: 113 LASQVEKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDIEYIRLALIGEKLGHKV 172 Query: 101 VSQLNKFKDKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI-- 151 L K + L + L + P + K S+ G + Sbjct: 173 YIVLEKLSELKTVLEESKKLGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSASQVLTV 232 Query: 152 ------ESEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202 E + ++ L FH + + + E ++ +GGG+ Sbjct: 233 IESLKSEEMLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELQKLGANVKCFDVGGGL 292 Query: 203 HFTDK 207 Sbjct: 293 AVDYD 297 >gi|221325970|gb|ACM16864.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55 P + L N L++ A + + +KC + + + ++ G Sbjct: 45 PIVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 56 ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ + GLR +S + + G + Sbjct: 165 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|289806500|ref|ZP_06537129.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 205 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 56/190 (29%), Gaps = 26/190 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 1 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 60 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 61 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 120 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158 ++A++L+ L + ++ + + G ++ ++ Sbjct: 121 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 180 Query: 159 NGLMFHNNCE 168 L FH + Sbjct: 181 QLLHFHLGSQ 190 >gi|242309691|ref|ZP_04808846.1| arginine decarboxylase [Helicobacter pullorum MIT 98-5489] gi|239523692|gb|EEQ63558.1| arginine decarboxylase [Helicobacter pullorum MIT 98-5489] Length = 617 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 89/300 (29%), Gaps = 49/300 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLNQYMD-- 53 P + + ++ +N+ K + +K + + Q + Sbjct: 46 PLLVRFPHLIKKQVEKIFSHFENSIKEYHYKGKFKAVFPIKVNHFPNFILPLMEQTQNRC 105 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ A + + T+ +++L Sbjct: 106 YGLEAGSKSELIIAMAYTNENAPITVNGFKDKEMISLGFIAAKMGHDITLTIEGLNELET 165 Query: 107 FKDKAQKLHKKI---GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155 + ++ + K GLRI S I A S+ G + +E+ Sbjct: 166 IIEVSKSMGKPYPNIGLRIRL-HSTGVGIWAKSGGINSKFGLTATELVEAIYLLKKNKLL 224 Query: 156 KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPV 211 + FH + L+ + + +++GGG+ + Sbjct: 225 DKFTMIHFHIGSQISDIAPLKKALREAGNIYAELRKMGAKNLNNVNIGGGLAVEYTQHEA 284 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G + N L + VL++ Sbjct: 285 HQNRNYTLGEFSGNVIFTLKEIAKNKKEPEPNIFIESGRYVSANHAVLISPVLELFSQEY 344 >gi|27379075|ref|NP_770604.1| hypothetical protein bll3964 [Bradyrhizobium japonicum USDA 110] gi|27352225|dbj|BAC49229.1| bll3964 [Bradyrhizobium japonicum USDA 110] Length = 359 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 23/203 (11%), Positives = 50/203 (24%), Gaps = 11/203 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLY 61 TP +ID K+ N+ AGV +K + + G T L Sbjct: 14 GTPCAVIDMDKVERNIARIQKACDEAGVANRPHIKTHKNPTIAKMQIAAGAKGITCQKLG 73 Query: 62 EVM-LGHEKFGGETHAYNVAYKDCEIDAV---LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E + + +YN+ ++ T+ + + + A + Sbjct: 74 EAEIMANAGIDDILISYNLLGEEKMARLGALQAKANMTVAADNSTVVAGLPKAAAASGRP 133 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + + + + + K + F + Sbjct: 134 LSVVVECDTG------RKRAGVETPAEAIALAREIAGSKGLEFAGFMLYPTETGWADAQK 187 Query: 178 MLKNIEKEFGHFITQIEWISLGG 200 + +S GG Sbjct: 188 FYDEALAGVRAHGLDAKIVSTGG 210 >gi|84393203|ref|ZP_00991966.1| arginine decarboxylase [Vibrio splendidus 12B01] gi|84376169|gb|EAP93054.1| arginine decarboxylase [Vibrio splendidus 12B01] Length = 629 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 75/267 (28%), Gaps = 35/267 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDT-------LN 49 P + Q + + A L+ +K + D L Sbjct: 54 PALVRFPQIVHQRVHNICNAFNQAIDEYQYDNRYLLVYPIKVNQQKEVVDEILASQAQLE 113 Query: 50 QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 Q G + S E++ L + N I L + I+ +S Sbjct: 114 QKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 173 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 174 ELDLVLSEAKALGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQVLTVIERLKAED 233 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 ++ + + FH + + + E Q++++ +GGG+ Sbjct: 234 QLDVLELVHFHLGSQMANIRDVRNGVSEAARFYCELRDIGAQLKYLDVGGGLAVDYDG-T 292 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I + G+ Sbjct: 293 RSQSSNSMNYGLLEYARNIVMTVGDIC 319 >gi|219885457|gb|ACL53103.1| unknown [Zea mays] Length = 639 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 26/239 (10%), Positives = 64/239 (26%), Gaps = 23/239 (9%) Query: 12 QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59 L N ++T + + + + +K + + ++ G + S Sbjct: 73 DVLKNRIETLHNAFNSAMESTGYTSRYQGVFPIKVNQNKHVVQDMVRFGQQWNYGLEAGS 132 Query: 60 LYEVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E+++ + + YKD + A+ + + N + L ++ A L Sbjct: 133 KPELLIAMSCLPVTEAEPKPYLICNGYKDADYIALALSARAMGLNPIIVLEMEEELAIVL 192 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + L+ + F + + + + Sbjct: 193 DQYRKLQQKLPDD------DAVRKKFEPIIGIRAKLLTKLPGHFGSTAGKHGKFGMLADQ 246 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + + + KE Q+ +G I T K Y + +L Sbjct: 247 IYEVAETLGKEGKLHWLQLLHFHIGSMIPTTGKVYDAVSEAAGIYCNLVNEHGAKWLAT 305 >gi|221326020|gb|ACM16889.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326022|gb|ACM16890.1| arginine decarboxylase [Solanum pimpinellifolium] Length = 222 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + L N L++ A + + +KC + + + ++ Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGLR 104 Query: 54 -GTTSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103 G + S E++L K E +KD E ++ I+ + Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164 Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152 L+ D ++K+ IGLR +S + + G + Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214 >gi|224367265|ref|YP_002601428.1| arginine decarboxylase [Desulfobacterium autotrophicum HRM2] gi|223689981|gb|ACN13264.1| SpeA [Desulfobacterium autotrophicum HRM2] Length = 639 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 31/247 (12%), Positives = 69/247 (27%), Gaps = 27/247 (10%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH 67 + + T Y + GV +K + + + G + S E++ Sbjct: 85 ESFRTAIRTFDYKGEFKGV---FPIKVNQQKQVIEAITNIGTQYHHGLEAGSKAELIAAL 141 Query: 68 EKF-GGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E YKD E + + S+L+ +++ L + + Sbjct: 142 SFLKDKEACLVCNGYKDREFIDLGLYACKMGYKCFFVLEMPSELDLILERSSALGIRPLI 201 Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171 + +S + S G IE + + L +H + + Sbjct: 202 GVRFKLSTQAGGHWTESAGDRSIFGLSTSQIIEVIEKLKSLEMLDCLQLLHYHLGSQISN 261 Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 A ++ + + + + LGGG+ ++ E+Y Sbjct: 262 IRDIRASVQEACQVYAGLVKEGAAMGYFDLGGGLAVDYDG-SHTNYMNSRNYSLEEYCAD 320 Query: 229 IYLEPGE 235 + E Sbjct: 321 VIEAIME 327 >gi|327485814|gb|AEA80220.1| Biosynthetic arginine decarboxylase [Vibrio cholerae LMA3894-4] Length = 636 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 61 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 120 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 121 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 181 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 +++ + + FH + + E I++ +GGG+ Sbjct: 241 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 299 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 300 RSQSSNSMNYGLHEYARNIVSTVSDVCN 327 >gi|229522364|ref|ZP_04411780.1| biosynthetic arginine decarboxylase [Vibrio cholerae TM 11079-80] gi|229340349|gb|EEO05355.1| biosynthetic arginine decarboxylase [Vibrio cholerae TM 11079-80] Length = 661 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 86 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 +++ + + FH + + E I++ +GGG+ Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352 >gi|229526675|ref|ZP_04416079.1| biosynthetic arginine decarboxylase [Vibrio cholerae bv. albensis VL426] gi|229528324|ref|ZP_04417715.1| biosynthetic arginine decarboxylase [Vibrio cholerae 12129(1)] gi|254284449|ref|ZP_04959416.1| biosynthetic arginine decarboxylase [Vibrio cholerae AM-19226] gi|297580164|ref|ZP_06942091.1| biosynthetic arginine decarboxylase [Vibrio cholerae RC385] gi|150425234|gb|EDN17010.1| biosynthetic arginine decarboxylase [Vibrio cholerae AM-19226] gi|229334686|gb|EEO00172.1| biosynthetic arginine decarboxylase [Vibrio cholerae 12129(1)] gi|229336833|gb|EEO01851.1| biosynthetic arginine decarboxylase [Vibrio cholerae bv. albensis VL426] gi|297535810|gb|EFH74644.1| biosynthetic arginine decarboxylase [Vibrio cholerae RC385] Length = 661 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 86 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 +++ + + FH + + E I++ +GGG+ Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352 >gi|153827278|ref|ZP_01979945.1| biosynthetic arginine decarboxylase [Vibrio cholerae MZO-2] gi|149738795|gb|EDM53137.1| biosynthetic arginine decarboxylase [Vibrio cholerae MZO-2] Length = 354 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 79 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 138 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 139 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 198 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 199 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 258 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 +++ + + FH + + E I++ +GGG+ Sbjct: 259 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 317 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 318 RSQSSNSMNYGLHEYARNIVSTVSDVCN 345 >gi|153830156|ref|ZP_01982823.1| biosynthetic arginine decarboxylase [Vibrio cholerae 623-39] gi|148874374|gb|EDL72509.1| biosynthetic arginine decarboxylase [Vibrio cholerae 623-39] Length = 661 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 86 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 +++ + + FH + + E I++ +GGG+ Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352 >gi|254227104|ref|ZP_04920657.1| biosynthetic arginine decarboxylase [Vibrio cholerae V51] gi|125620374|gb|EAZ48755.1| biosynthetic arginine decarboxylase [Vibrio cholerae V51] Length = 649 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 86 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 +++ + + FH + + E I++ +GGG+ Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352 >gi|153215898|ref|ZP_01950202.1| biosynthetic arginine decarboxylase [Vibrio cholerae 1587] gi|153802696|ref|ZP_01957282.1| biosynthetic arginine decarboxylase [Vibrio cholerae MZO-3] gi|124114542|gb|EAY33362.1| biosynthetic arginine decarboxylase [Vibrio cholerae 1587] gi|124121781|gb|EAY40524.1| biosynthetic arginine decarboxylase [Vibrio cholerae MZO-3] Length = 661 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 86 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 +++ + + FH + + E I++ +GGG+ Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352 >gi|68165772|gb|AAY87846.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165774|gb|AAY87847.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165776|gb|AAY87848.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165778|gb|AAY87849.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165780|gb|AAY87850.1| biosynthetic arginine decarboxylase [Vibrio cholerae] Length = 331 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 43 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 102 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 103 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 162 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 163 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 222 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 +++ + + FH + + E I++ +GGG+ Sbjct: 223 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 281 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 282 RSQSSNSMNYGLHEYARNIVSTVSDVCN 309 >gi|262173509|ref|ZP_06041186.1| biosynthetic arginine decarboxylase [Vibrio mimicus MB-451] gi|261890867|gb|EEY36854.1| biosynthetic arginine decarboxylase [Vibrio mimicus MB-451] Length = 654 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 79 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQREVVDEILASQAELE 138 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 139 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 198 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 199 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 258 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 +++ + + FH + + E I++ +GGG+ Sbjct: 259 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 317 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 318 RSQSSNSMNYGLHEYARNIVSTVSDVCN 345 >gi|261212825|ref|ZP_05927109.1| biosynthetic arginine decarboxylase [Vibrio sp. RC341] gi|260837890|gb|EEX64567.1| biosynthetic arginine decarboxylase [Vibrio sp. RC341] Length = 654 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 79 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQREVVDEILASQAELE 138 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 139 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 198 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 199 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 258 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 +++ + + FH + + E I++ +GGG+ Sbjct: 259 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 317 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 318 RSQSSNSMNYGLHEYARNIVSTVSDVCN 345 >gi|258623205|ref|ZP_05718214.1| biosynthetic arginine decarboxylase [Vibrio mimicus VM573] gi|258584503|gb|EEW09243.1| biosynthetic arginine decarboxylase [Vibrio mimicus VM573] Length = 661 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 86 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQREVVDEILASQAELE 145 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 +++ + + FH + + E I++ +GGG+ Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352 >gi|258624997|ref|ZP_05719921.1| biosynthetic arginine decarboxylase [Vibrio mimicus VM603] gi|258582723|gb|EEW07548.1| biosynthetic arginine decarboxylase [Vibrio mimicus VM603] Length = 661 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 86 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQREVVDEILASQAELE 145 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 +++ + + FH + + E I++ +GGG+ Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352 >gi|302552096|ref|ZP_07304438.1| alanine racemase domain-containing protein [Streptomyces viridochromogenes DSM 40736] gi|302469714|gb|EFL32807.1| alanine racemase domain-containing protein [Streptomyces viridochromogenes DSM 40736] Length = 364 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/198 (8%), Positives = 49/198 (24%), Gaps = 8/198 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP ++D L +N++ + G L K + D L G + +++ Sbjct: 9 LATPALVVDPDVLESNIERMAEASRAQGFVLRPHAKAHKCAQIGDLQLRAGARGLSVATI 68 Query: 61 YEVML-GHEKFGGETHAYN----VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E AY + ++ + + Sbjct: 69 GEAEAFARVGVDDLFIAYPVWLDADKAQRLRRLADRIALRVGVESIEGAQRLGNAVHGSA 128 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 + + + + + + +G+ D + ++ Sbjct: 129 RPVEVLVEVDSGSRRTGVQPHMAGE--VGKAAADAGLLVAGVFTFPGHGYGHDARAREHA 186 Query: 176 SAMLKNIEKEFGHFITQI 193 + + + + + Sbjct: 187 ARDEERTLGQAAQVLRDL 204 >gi|195643260|gb|ACG41098.1| arginine decarboxylase [Zea mays] Length = 639 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/239 (10%), Positives = 64/239 (26%), Gaps = 23/239 (9%) Query: 12 QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59 L N ++T + + + + +K + + ++ G + S Sbjct: 73 DVLKNRIETLHNAFNSAMESTGYTSRYQGVFPIKVNQNKHVVQDMVRFGQQWNYGLEAGS 132 Query: 60 LYEVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E+++ + + YKD + A+ + + N + L ++ A L Sbjct: 133 KPELLIAMSCLPVTEAEPKPYLICNGYKDADYIALALSARAMGLNPIIVLEMEEELAIVL 192 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + L+ + F + + + + Sbjct: 193 DQYKKLQQKLPDD------DAVRKKFEPVIGIRAKLLTKLPGHFGSTAGKHGKFGMLADQ 246 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + + + KE Q+ +G I T K Y + +L Sbjct: 247 IYEVAETLGKEGKLHWLQLLHFHIGSMIPTTGKVYDAVSEAAGIYCNLVNEHGAKWLAT 305 >gi|254469431|ref|ZP_05082836.1| arginine decarboxylase [Pseudovibrio sp. JE062] gi|211961266|gb|EEA96461.1| arginine decarboxylase [Pseudovibrio sp. JE062] Length = 325 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/215 (10%), Positives = 57/215 (26%), Gaps = 23/215 (10%) Query: 18 LDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEK-FGG 72 D + + + +K + D + ++ G + S E+++ Sbjct: 81 ADAIKRVGYKGKYRGVFPIKVNQQAQVVDRIVEFGRPYSYGLEAGSKPELVIALAHRLPK 140 Query: 73 ETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQKLHKKIGLRINPS- 125 + KD E + I+ + +L D ++L ++ L + Sbjct: 141 DALIVCNGVKDEEFIRLAILSRKLGFNTIIVLESPKELETVIDVVEELGEEPLLGVRVKL 200 Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSA 177 + + + S G + + + H + Sbjct: 201 TNQIGGKWEESSGDRSTFGMNTDQLVSVIDKLREAKLLHCLKLQHSHLGSQVPDVNDVRR 260 Query: 178 MLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY 209 + + F ++ + LGGG+ Sbjct: 261 AVGEACRYFVELTREGAELTHLDLGGGLGVDYTGE 295 >gi|227812381|ref|YP_002812391.1| biosynthetic arginine decarboxylase [Vibrio cholerae M66-2] gi|227011523|gb|ACP07734.1| biosynthetic arginine decarboxylase [Vibrio cholerae M66-2] Length = 661 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 86 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156 +L+ +A+ L K L + ++ + + G + + Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 265 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + E I++ +GGG+ Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352 >gi|153820258|ref|ZP_01972925.1| biosynthetic arginine decarboxylase [Vibrio cholerae NCTC 8457] gi|255746431|ref|ZP_05420378.1| biosynthetic arginine decarboxylase [Vibrio cholera CIRS 101] gi|262158214|ref|ZP_06029331.1| biosynthetic arginine decarboxylase [Vibrio cholerae INDRE 91/1] gi|262169090|ref|ZP_06036783.1| biosynthetic arginine decarboxylase [Vibrio cholerae RC27] gi|126509199|gb|EAZ71793.1| biosynthetic arginine decarboxylase [Vibrio cholerae NCTC 8457] gi|255736185|gb|EET91583.1| biosynthetic arginine decarboxylase [Vibrio cholera CIRS 101] gi|262022371|gb|EEY41079.1| biosynthetic arginine decarboxylase [Vibrio cholerae RC27] gi|262029896|gb|EEY48543.1| biosynthetic arginine decarboxylase [Vibrio cholerae INDRE 91/1] Length = 654 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 79 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 138 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 139 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 198 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156 +L+ +A+ L K L + ++ + + G + + Sbjct: 199 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 258 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + E I++ +GGG+ Sbjct: 259 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 317 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 318 RSQSSNSMNYGLHEYARNIVSTVSDVCN 345 >gi|68165764|gb|AAY87842.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165766|gb|AAY87843.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165768|gb|AAY87844.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165770|gb|AAY87845.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165782|gb|AAY87851.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165784|gb|AAY87852.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165786|gb|AAY87853.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165788|gb|AAY87854.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165790|gb|AAY87855.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165792|gb|AAY87856.1| biosynthetic arginine decarboxylase [Vibrio cholerae] gi|68165794|gb|AAY87857.1| biosynthetic arginine decarboxylase [Vibrio cholerae] Length = 331 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 43 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 102 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 103 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 162 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156 +L+ +A+ L K L + ++ + + G + + Sbjct: 163 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 222 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + E I++ +GGG+ Sbjct: 223 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 281 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 282 RSQSSNSMNYGLHEYARNIVSTVSDVCN 309 >gi|15601570|ref|NP_233201.1| arginine decarboxylase [Vibrio cholerae O1 biovar eltor str. N16961] gi|121591146|ref|ZP_01678452.1| biosynthetic arginine decarboxylase [Vibrio cholerae 2740-80] gi|121729781|ref|ZP_01682218.1| biosynthetic arginine decarboxylase [Vibrio cholerae V52] gi|147672120|ref|YP_001215260.1| arginine decarboxylase [Vibrio cholerae O395] gi|229506032|ref|ZP_04395541.1| biosynthetic arginine decarboxylase [Vibrio cholerae BX 330286] gi|229510112|ref|ZP_04399592.1| biosynthetic arginine decarboxylase [Vibrio cholerae B33] gi|229517758|ref|ZP_04407203.1| biosynthetic arginine decarboxylase [Vibrio cholerae RC9] gi|229605563|ref|YP_002876267.1| arginine decarboxylase [Vibrio cholerae MJ-1236] gi|254849973|ref|ZP_05239323.1| arginine decarboxylase [Vibrio cholerae MO10] gi|298499604|ref|ZP_07009410.1| arginine decarboxylase [Vibrio cholerae MAK 757] gi|9658242|gb|AAF96713.1| biosynthetic arginine decarboxylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546992|gb|EAX57136.1| biosynthetic arginine decarboxylase [Vibrio cholerae 2740-80] gi|121628478|gb|EAX60967.1| biosynthetic arginine decarboxylase [Vibrio cholerae V52] gi|146314503|gb|ABQ19043.1| biosynthetic arginine decarboxylase [Vibrio cholerae O395] gi|227015463|gb|ACP11672.1| biosynthetic arginine decarboxylase [Vibrio cholerae O395] gi|229345794|gb|EEO10767.1| biosynthetic arginine decarboxylase [Vibrio cholerae RC9] gi|229352557|gb|EEO17497.1| biosynthetic arginine decarboxylase [Vibrio cholerae B33] gi|229356383|gb|EEO21301.1| biosynthetic arginine decarboxylase [Vibrio cholerae BX 330286] gi|229372049|gb|ACQ62471.1| biosynthetic arginine decarboxylase [Vibrio cholerae MJ-1236] gi|254845678|gb|EET24092.1| arginine decarboxylase [Vibrio cholerae MO10] gi|297541585|gb|EFH77636.1| arginine decarboxylase [Vibrio cholerae MAK 757] Length = 661 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 86 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156 +L+ +A+ L K L + ++ + + G + + Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 265 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + E I++ +GGG+ Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352 >gi|48474667|sp|Q9KLD1|SPEA_VIBCH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC Length = 640 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 65 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 124 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 125 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 184 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156 +L+ +A+ L K L + ++ + + G + + Sbjct: 185 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 244 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + E I++ +GGG+ Sbjct: 245 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 303 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 304 RSQSSNSMNYGLHEYARNIVSTVSDVCN 331 >gi|262403432|ref|ZP_06079990.1| biosynthetic arginine decarboxylase [Vibrio sp. RC586] gi|262349936|gb|EEY99071.1| biosynthetic arginine decarboxylase [Vibrio sp. RC586] Length = 654 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 79 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQREVVDEILASQAELE 138 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 139 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 198 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156 +L+ +A+ L K L + ++ + + G + + Sbjct: 199 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 258 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + E I++ +GGG+ Sbjct: 259 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 317 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 318 RSQSSNSMNYGLHEYARNIVSTVSDVCN 345 >gi|229514249|ref|ZP_04403710.1| biosynthetic arginine decarboxylase [Vibrio cholerae TMA 21] gi|229348229|gb|EEO13187.1| biosynthetic arginine decarboxylase [Vibrio cholerae TMA 21] Length = 661 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P + Q L + A L+ +K + D + + Sbjct: 86 PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQREVVDEILASQAELE 145 Query: 53 D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ L + N I L + I+ +S Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156 +L+ +A+ L K L + ++ + + G + + Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 265 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + FH + + E I++ +GGG+ Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + +Y+ I + Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352 >gi|297517545|ref|ZP_06935931.1| arginine decarboxylase [Escherichia coli OP50] Length = 229 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 50/166 (30%), Gaps = 18/166 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 61 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107 + S E+M L H N I + + ++ +S++ Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180 Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE 152 D+A++L+ L + ++ + + G ++ Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQ 226 >gi|212704456|ref|ZP_03312584.1| hypothetical protein DESPIG_02512 [Desulfovibrio piger ATCC 29098] gi|212672177|gb|EEB32660.1| hypothetical protein DESPIG_02512 [Desulfovibrio piger ATCC 29098] Length = 644 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 78/289 (26%), Gaps = 48/289 (16%) Query: 11 KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58 + L + + + + A + + +K + + + Q+ G Sbjct: 78 ENILDSRIASLHESFRKAIKNLNYQGQYRGVFPIKVNQQQQVVEKIAQFGSRYHHGLEVG 137 Query: 59 SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------FKDKA 111 S E++ E YKD E + + FN L ++ Sbjct: 138 SKAELIAAVSLMRDTEACIVCNGYKDEEFIDLGLQAQRLGFNLFFVLEMPSELDVLLSRS 197 Query: 112 QKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLM 162 ++L + + + +S D S G ++ + L Sbjct: 198 RELGIRPNIGVRAKLSVKASGHWTDSGGERSTFGLSPAQIVDVVDKLKACDMLDCFRLLH 257 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207 +H + + + + ++ LGGG+ Sbjct: 258 YHLGSQVSNIRDIRTGVMEGARLYVGLVQEGAPMGYLDLGGGLAVDYDGSHTNYISSRNY 317 Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251 D D + + ++ I E G A V + L VLD+ Sbjct: 318 NLDEYSADIVEAIMSILDEQQVPHPHIITESGRATVAYYSVLLFNVLDV 366 >gi|261266393|gb|ACX56223.1| arginine decarboxylase [Humulus lupulus] Length = 554 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 28/229 (12%), Positives = 64/229 (27%), Gaps = 33/229 (14%) Query: 12 QKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59 L N L++ + + +K + + + ++ G + S Sbjct: 34 DVLKNRLESLQSAFDIAIQSQDYENHYQGVYPMKFNQDRFVVEDIVKFGSPFRFGLEAGS 93 Query: 60 LYEVMLGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E++L + ++ +KD E ++ + NTV L + ++ + Sbjct: 94 KPELLLAVSCYVQGSPDSFLVCNGFKDVEYISLALVARKLALNTVIVLEQEEELDLVIEL 153 Query: 117 KIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGL 161 L I P + + + G + + L Sbjct: 154 SRKLSIRPVIGPRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLEQAGMLDYLQLL 213 Query: 162 MFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 FH + + + I E ++ I +GGG+ Sbjct: 214 HFHIGSQIPTTALLADGVSEAAQIYCELVRLGAHMQVIDIGGGLGIDYD 262 >gi|218709231|ref|YP_002416852.1| arginine decarboxylase [Vibrio splendidus LGP32] gi|218322250|emb|CAV18374.1| Biosynthetic arginine decarboxylase [Vibrio splendidus LGP32] Length = 635 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 75/267 (28%), Gaps = 35/267 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDT-------LN 49 P + Q + + A L+ +K + D L Sbjct: 60 PALVRFPQIVHQRVHNICNAFNQAIDEYQYDNRYLLVYPIKVNQQKEVVDEILASQAQLE 119 Query: 50 QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 Q G + S E++ L + N I L + I+ +S Sbjct: 120 QKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 179 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 180 ELDLVLSEAKALGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQVLTVIERLKAED 239 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 ++ + + FH + + + E Q++++ +GGG+ Sbjct: 240 QLDVLELVHFHLGSQMANIRDVRNGVSEAARFYCELRDIGAQLKFLDVGGGLAVDYDG-T 298 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I + G+ Sbjct: 299 RSQSSNSMNYGLLEYARNIVMTVGDIC 325 >gi|209809065|ref|YP_002264603.1| arginine decarboxylase [Aliivibrio salmonicida LFI1238] gi|208010627|emb|CAQ81008.1| biosynthetic arginine decarboxylase [Aliivibrio salmonicida LFI1238] Length = 641 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 35/324 (10%), Positives = 83/324 (25%), Gaps = 43/324 (13%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDT-------LNQYMDGTTSSSLYEVM--LGHEK 69 + L+ +K + D L Q G + S E++ L + Sbjct: 88 QAIDEYQYENHYLLVYPIKVNQQKEVVDEILASQAQLEQKQLGLEAGSKPELLAVLALAQ 147 Query: 70 FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 N + L + I+ +S+L+ +A+ L L + Sbjct: 148 KASSVIVCNGYKDREYVRLALIGEKLGHSVFIVLEKLSELDLVLSEAKALGVTPRLGLRI 207 Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172 ++ + + G + + + + FH + + Sbjct: 208 RLASQGAGKWQASGGEKSKFGLSASQVLTVIDRLKAQGQLDILELVHFHLGSQMANIRDV 267 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 + E +++++ +GGG+ + +Y+ I Sbjct: 268 RNGVSEAARFYCELRDIGAELKYLDVGGGLAVDYDG-TRSQSSNSMNYGLTEYARNIV-- 324 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMV 292 TT+ DI + + V S + + Sbjct: 325 -------------TTIGDICQLYSQPMPVIISESGRSLTAHHAVLITNVIGTESYTPEAI 371 Query: 293 CGRSCLAGDIFGE-FHFEKPVKIG 315 C A + + + ++ G Sbjct: 372 EAPHCDAPLLLHNMWRNLEQLENG 395 >gi|148979434|ref|ZP_01815518.1| arginine decarboxylase [Vibrionales bacterium SWAT-3] gi|145961793|gb|EDK27087.1| arginine decarboxylase [Vibrionales bacterium SWAT-3] Length = 635 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 75/267 (28%), Gaps = 35/267 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDT-------LN 49 P + Q + + A L+ +K + D L Sbjct: 60 PALVRFPQIVHQRVHNICNAFNQAIEEYQYDNRYLLVYPIKVNQQKEVVDEILASQAQLE 119 Query: 50 QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 Q G + S E++ L + N I L + I+ +S Sbjct: 120 QKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 179 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 180 ELDLVLSEAKALGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQVLTVIERLKAED 239 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 ++ + + FH + + + E Q++++ +GGG+ Sbjct: 240 QLDVLELVHFHLGSQMANIRDVRNGVSEAARFYCELRDIGAQLKFLDVGGGLAVDYDG-T 298 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I + G+ Sbjct: 299 RSQSSNSMNYGLLEYARNIVMTVGDIC 325 >gi|86147538|ref|ZP_01065849.1| arginine decarboxylase [Vibrio sp. MED222] gi|85834706|gb|EAQ52853.1| arginine decarboxylase [Vibrio sp. MED222] Length = 629 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 75/267 (28%), Gaps = 35/267 (13%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDT-------LN 49 P + Q + + A L+ +K + D L Sbjct: 54 PALVRFPQIVHQRVHNICNAFNQAIDEYQYDNRYLLVYPIKVNQQKEVVDEILASQAQLE 113 Query: 50 QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 Q G + S E++ L + N I L + I+ +S Sbjct: 114 QKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 173 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153 +L+ +A+ L K L + ++ + + G + E Sbjct: 174 ELDLVLSEAKALGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQVLTVIERLKAED 233 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 ++ + + FH + + + E Q++++ +GGG+ Sbjct: 234 QLDVLELVHFHLGSQMANIRDVRNGVSEAARFYCELRDIGAQLKFLDVGGGLAVDYDG-T 292 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAI 237 + +Y+ I + G+ Sbjct: 293 RSQSSNSMNYGLLEYARNIVMTVGDIC 319 >gi|91793632|ref|YP_563283.1| arginine decarboxylase [Shewanella denitrificans OS217] gi|123166011|sp|Q12LW6|SPEA_SHEDO RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|91715634|gb|ABE55560.1| arginine decarboxylase [Shewanella denitrificans OS217] Length = 636 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 84/303 (27%), Gaps = 51/303 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLNQYMD-- 53 P + Q L + +++ A L+ +K + + L + Sbjct: 61 PVLVRFPQILHHRVESLCDAFNQAIQKYEYQNDYLLVYPIKVNQQKTVVEEILASQVSKE 120 Query: 54 ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E+M L + N + L + I+ +S Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDKEYVRLALIGEKLGHKVYIVLEKMS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153 +L ++A++L L + +++ + + G ++ + Sbjct: 181 ELKMVLEEARELGVTPRLGLRTRLAFQGKGKWQASGGEKSKFGLSAAQVLKVVDELKEAN 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 ++++ L FH + + + E I +GGG+ Sbjct: 241 MLESLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRQLGASINCFDVGGGLAVDYDGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253 + L + +Y + E G + + L T V+ Sbjct: 301 SQSNNSMNYGLTEYANNIVNVLTDLCNEYEQPMPRIISESGRHLTAHHAVLITDVIGTEA 360 Query: 254 NIK 256 + Sbjct: 361 YMP 363 >gi|268316970|ref|YP_003290689.1| arginine decarboxylase [Rhodothermus marinus DSM 4252] gi|262334504|gb|ACY48301.1| arginine decarboxylase [Rhodothermus marinus DSM 4252] Length = 653 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 33/316 (10%), Positives = 69/316 (21%), Gaps = 53/316 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYMD--- 53 P L + L + + A + A +K + + + + Sbjct: 71 PVLLRFQDLLRTRVQQLNRAFRRAIAETGYANTYRGVYPIKVNQLREVVEEILEAGAPFS 130 Query: 54 -GTTSSSLYEVMLGHEKFGGETH--AYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLN 105 G S E++ + N + +L+ + +++ Sbjct: 131 FGLECGSKSELLATLPYLDRDDMLLICNGCKDRAMMQLILAGQRLGKKVIPVIERMAEFR 190 Query: 106 KFKDK------------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES 153 + A + + D+I Sbjct: 191 LLLEALEDRSLPQAGVPAIFGVRLRLSATGAGLWSESGGETSKFGLSLSELLGLLDRIGD 250 Query: 154 EIKNVNGL--MFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDK- 207 V+ FH + I I ++ +GGG+ T + Sbjct: 251 GHSGVSLQLLHFHMGSQIAHLAHIREAVTEAARIYARLRKRGLGITYLDIGGGLGVTYEA 310 Query: 208 --------------DYPVKDFCQRLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDI 251 +Y + + L E G A+ + T VLD Sbjct: 311 GNPDAPGSIDYSLGEYAHTVVATVQQVCEAEGVPPPVLISESGRALTAYHSVFVTEVLDT 370 Query: 252 SENIKNLVIVDSSVEA 267 L + Sbjct: 371 RSRHYELPAWANGGIH 386 >gi|317152609|ref|YP_004120657.1| arginine decarboxylase [Desulfovibrio aespoeensis Aspo-2] gi|316942860|gb|ADU61911.1| arginine decarboxylase [Desulfovibrio aespoeensis Aspo-2] Length = 637 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 27/228 (11%), Positives = 65/228 (28%), Gaps = 24/228 (10%) Query: 14 LLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHE 68 + N +A+ G +K + + + ++ G + S E++ Sbjct: 81 INENFRSAIKSLGYRGSYLGAYPIKVNQQQQVVEAVTRHGKKYHHGLEAGSKAELVAAMG 140 Query: 69 KF-GGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E YKD E + + ++ +L ++++ K L Sbjct: 141 MLRDTEAVLVCNGYKDEEFIDLGLHATQLGFTCILVVEMPGELPLIIERSKAKKVKPILG 200 Query: 122 INPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSF 172 + +S L + G I+ + + L +H + + Sbjct: 201 VRVKLSTQANGLWAESGGDRSIFGLNATQIIDVIDRLKEADMLDCLQLLHYHLGSQIPNI 260 Query: 173 LCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQR 217 + + + + Q+ ++ LGGG+ R Sbjct: 261 REIRSAVAEASRVYAGIVAEGAQMRYLDLGGGLAVDYDGTQTNFMSSR 308 >gi|320100688|ref|YP_004176280.1| arginine decarboxylase [Desulfurococcus mucosus DSM 2162] gi|319753040|gb|ADV64798.1| arginine decarboxylase [Desulfurococcus mucosus DSM 2162] Length = 601 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 73/256 (28%), Gaps = 31/256 (12%) Query: 29 GVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVMLG--HEKFGGETHAYNVAYK 82 G++ + +K + D + +Y G + S+ E+ L + G Y+ Sbjct: 102 GLQPVFPMKVNPIDIVIDAIWRYGEKYGWGFNTGSIGELELLSKYAGKGPRILVYDGVLS 161 Query: 83 DCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF 140 D + V + ++ ++GLRI P A Sbjct: 162 DNVARILEGFREKGWRVVVDVESEHDLDILSKHPELEVGLRIKPLFKPGG-KWAHSAGLE 220 Query: 141 SRLGEKCKDK--IESEIKNVN----GLMFHNNCENKSFLCFSAMLKNIEKEF----GHFI 190 + G + E K + L H + + A + + + + Sbjct: 221 GKFGLTVNTLVKLREEYKWIEERARLLHVHAGSQIYKWSDVEAFINEVYNIYVQLTANGF 280 Query: 191 TQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFSE-----KYSVQIYLEPGEAIV 238 +++E + GGG+ + D P + E G IV Sbjct: 281 SRLELVDPGGGLAYPYLDTRSGSIESPDYTVVDYFNHMLRVFSRLDKHPVLVYEGGRYIV 340 Query: 239 TNTTTLNTTVLDISEN 254 + V+D+ Sbjct: 341 AAHRIVVAKVVDVRPY 356 >gi|88857270|ref|ZP_01131913.1| arginine decarboxylase, PLP-binding, biosynthetic [Pseudoalteromonas tunicata D2] gi|88820467|gb|EAR30279.1| arginine decarboxylase, PLP-binding, biosynthetic [Pseudoalteromonas tunicata D2] Length = 637 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 51/303 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q L N + A L+ +K + + + Sbjct: 62 PALVRFPQILHNRVHNLCAAFNEAIANYNYPEKYLLVYPIKVNQQREVVEEIVASQANNE 121 Query: 54 ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108 G + S E++ + YKD E + + + L K Sbjct: 122 VKQLGLEAGSKAELLAVLAMAQKASSVIVCNGYKDVEYIRLALIGEKLGHKVNIVLEKLS 181 Query: 109 DKAQKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 + L + L ++P S K S+ G + Sbjct: 182 ELDMVLAEAEKLNVSPRLGLRVRLASQGKGKWQASGGEKSKFGLSASQVLTVLKKLKDLG 241 Query: 156 --KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + + FH + + + E ++ + +GGG+ Sbjct: 242 KSDTLQLVHFHLGSQMANIRDVRTGVSEAARFYCELRRLGAELVCMDVGGGLAIDYDGTR 301 Query: 208 -------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISE 253 +Y + ++ + Q E G A+ + L + V+ Sbjct: 302 SQSHNSMNYSLAEYANNIVYTIGDICKQYNQPMPTIISESGRALTAHHAVLISNVIGTES 361 Query: 254 NIK 256 Sbjct: 362 YNP 364 >gi|258510371|ref|YP_003183805.1| alanine racemase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477097|gb|ACV57416.1| alanine racemase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 400 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 75/338 (22%), Gaps = 33/338 (9%) Query: 5 PYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMF-DTLNQYMDGTTSS 58 P + +ID L +N+ G L++A+K A + + + + + Sbjct: 4 PLFAVIDLAHLSHNIRYLKSRL-RPGASLMVAVKADAYGHGVRAVVGRLVREGVHHVAVA 62 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 SL E + G A I +S +++ ++L + Sbjct: 63 SLEEALEIRAFHRGVNILVLGAVTPDACMKAAEAEVEIALTDLSPIDEIPRLPKRLRVHL 122 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 L + K + + + + + G M Sbjct: 123 PLDTGMNRLGVKRTDEAVALARAIAKREDLELVGA------GTHLAAADAEDPAHAAGQM 176 Query: 179 LKNIEKE--FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + + I G ++ Y A Sbjct: 177 ERLGAFVRALEQAGLRPPRIHAGNSAALLR---NPAWHLDMVRVGIAAYGYSPDPSVLPA 233 Query: 237 IVTNTTTL-NTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTGPY 288 VL +++ + + N G Sbjct: 234 PSLRPVMSLYAGVLRVAQAQPGETVGYGATFTVTRPMTIATVAGGYADGYPRHLSNEGEV 293 Query: 289 TA-----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 V GR C D V GD ++ Sbjct: 294 LVRGEFRPVIGRVC--MDQLMVDVTGLDVATGDVVALF 329 >gi|238504745|ref|XP_002383603.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] gi|317155184|ref|XP_001824975.2| metal-activated pyridoxal enzyme [Aspergillus oryzae RIB40] gi|220689717|gb|EED46067.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] Length = 367 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 23/213 (10%), Positives = 53/213 (24%), Gaps = 15/213 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTS--S 58 + TP ++D + N+ G+ + LK + + L G Sbjct: 13 LDTPSMIVDLDLMEANIKKLFDSLLPTGLNIRPHLKTTKSAILAQKLAAAGAKGCCVAKV 72 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEID----AVLSNCDTIIFNTVSQLNKFKDKAQKL 114 S E + F + + I+ ++ + + Sbjct: 73 SEAEAITA-AGFDDILITCEIIGEPKVKRLVELFKKHKKIRIVVDSEVGATAISNALAQA 131 Query: 115 HKKIGLRINPSVSYSKFI-LADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173 + + + + L K+ + + V G H + Sbjct: 132 GVAEPISVLIDLDVGLHRTGVANAQAALALARHIKNLRQLRLIGVQGYEGHLQHLHSWED 191 Query: 174 CFSAMLK------NIEKEFGHFITQIEWISLGG 200 L+ + + IE ++ GG Sbjct: 192 RKKQCLESMKILTDTATLLRNEGFNIEVVTTGG 224 >gi|117620250|ref|YP_856149.1| arginine decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166200063|sp|A0KIP8|SPEA_AERHH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|117561657|gb|ABK38605.1| arginine decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 633 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 36/266 (13%), Positives = 73/266 (27%), Gaps = 33/266 (12%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD-- 53 TP L L + +D A + +K + +T++Q Sbjct: 60 TPVLLRFPDILKSRVDALFNAFGQAIEKSGYEGDYLCVYPIKVNQQRRVIETISQSYSDK 119 Query: 54 ---GTTSSSLYEVMLGHEKFG--GETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQ 103 G + S E++ G N I + + I+ S+ Sbjct: 120 PRLGLEAGSKPELLAVLSHHHEQGSVIVCNGYKDREYIRHALLGNLMGHKVYIVVEKPSE 179 Query: 104 LNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK------ 156 L D++ +L+ K + + S + S+ G + + Sbjct: 180 LEMVLDESARLNIKPNIGVRAKLASTGSGMWESSGGSMSKFGLSASQILALIERLRGLGK 239 Query: 157 --NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 + L FH + + E IE + +GGG+ + Sbjct: 240 LDCLQLLHFHLGSQIANIRDIQGGIRECGRFYAELRRLGANIEVVDVGGGLGVDYEGTRS 299 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAI 237 + C +Y+ + G+ Sbjct: 300 QSHCSA-NYSLSEYANNVVWGIGDVC 324 >gi|306845963|ref|ZP_07478530.1| metal-activated pyridoxal protein [Brucella sp. BO1] gi|306273598|gb|EFM55443.1| metal-activated pyridoxal protein [Brucella sp. BO1] Length = 355 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 89/324 (27%), Gaps = 15/324 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP L+D +++ N++ A AGVKL +K + G T L Sbjct: 11 VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + YN+ ++ + I TV AQ + Sbjct: 71 GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNETSLAGLAQHFMNEKR 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + P I + + L Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAR---IIEKSAGLCFGGLMTYPATGRADEAERWL 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + E IS GG P + + + Y + + G A + Sbjct: 188 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + + +S I+D+ +A D L + + A V G S Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301 Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322 G + G+ + IGDR+ D Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322 >gi|325849932|ref|ZP_08170971.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325479956|gb|EGC83039.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 246 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 30/211 (14%) Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168 L INP V + S+ G +D IE+ N+ G H + Sbjct: 36 CLLSINPDVKTDTHKFIQTSNADSKFGLNIRDENTEKIIEKIIENPNINLLGFHAHIGSQ 95 Query: 169 NKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224 K+ F M + F ++LGGG + ++ + Sbjct: 96 VKNLEFFKEEAKIMADFTKNIQDKFKKCFSHLNLGGGFGTRENLEDEDLDLEKFLKGLIV 155 Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPD 271 + ++ +EPG ++++ ++ V ++ L+ VD + ++ Sbjct: 156 FMEDLFEKNKLSITNLSIEPGRSLISKVGSILYRVGSTKVTMEGYPLIFVDGGMSDNIRP 215 Query: 272 YLLYQESATIY----PNTGPYTAMVCGRSCL 298 L + I N T V G+ C Sbjct: 216 SLYGARYSAILANKLDNEKNQTYRVGGKLCE 246 >gi|302387296|ref|YP_003823118.1| alanine racemase domain protein [Clostridium saccharolyticum WM1] gi|302197924|gb|ADL05495.1| alanine racemase domain protein [Clostridium saccharolyticum WM1] Length = 373 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 22/216 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 ++TP +ID N+ AG +L +K G T + + Sbjct: 11 LETPCLVIDVDLAEKNIRRMQDAADKAGCRLRPHIKTHKMPLFAQMQEMAGASGITCAKV 70 Query: 61 YEVMLGHEKFGGETHAYNVAY------KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E G E + A + +++ A Sbjct: 71 SEAE-VMADGGMEDIFIAYPMIGRFRIRRAMDLAERIRRLILAIDSLEGAKALDQAASDR 129 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL---------MFHN 165 + +R+ + + R E E + N+ G+ Sbjct: 130 DVVLEVRMEIDTGAGRTGVPM-----ERAVELALAVKEMKHLNLTGIFTFKSLILSGKPT 184 Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGG 201 + M+ + +I+ IS G Sbjct: 185 EDNLLAAQEEGNMMAETARMLKEAGVEIQDISAGSS 220 >gi|3421151|gb|AAC68516.1| arginine decarboxylase [Brassica nigra] gi|3421155|gb|AAC68517.1| arginine decarboxylase [Brassica oleracea] Length = 403 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 34/277 (12%), Positives = 77/277 (27%), Gaps = 29/277 (10%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +K + + + ++ G + S E++L + +K Sbjct: 1 YQGVYPVKGNQDRFVVEDIVRFGSQFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E + I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DAEYIFLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTTQIVRVMRKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + V + + Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYAEAVVASVR--FVCDRRS 237 Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + V+ + + V A Sbjct: 238 VKHPVICSESGRAIVSHHSVLIFEAVSAVKPMAHQAN 274 >gi|330828933|ref|YP_004391885.1| Biosynthetic arginine decarboxylase [Aeromonas veronii B565] gi|328804069|gb|AEB49268.1| Biosynthetic arginine decarboxylase [Aeromonas veronii B565] Length = 624 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 36/266 (13%), Positives = 73/266 (27%), Gaps = 33/266 (12%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD-- 53 TP L L + +D A + +K + +T++Q Sbjct: 51 TPVLLRFPDILKSRVDALFNAFGQAIEKSGYEGDYLCVYPIKVNQQRRVIETISQSYSDK 110 Query: 54 ---GTTSSSLYEVMLGHEKFG--GETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQ 103 G + S E++ G N I + + I+ S+ Sbjct: 111 PRLGLEAGSKPELLAVLSHHHEQGSVIVCNGYKDREYIRHALLGNLMGHKVYIVVEKPSE 170 Query: 104 LNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK------ 156 L D++ +L+ K + + S + S+ G + + Sbjct: 171 LEMVLDESARLNIKPNIGVRAKLASTGSGMWESSGGSMSKFGLSASQILALIERLRGLGK 230 Query: 157 --NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 + L FH + + E IE + +GGG+ + Sbjct: 231 LDCLQLLHFHLGSQIANIRDIQGGIRECGRFYAELRRLGANIEVVDVGGGLGVDYEGTRS 290 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAI 237 + C +Y+ + G+ Sbjct: 291 QSHCSA-NYSLSEYANNVVWGIGDVC 315 >gi|239815227|ref|YP_002944137.1| alanine racemase domain protein [Variovorax paradoxus S110] gi|239801804|gb|ACS18871.1| alanine racemase domain protein [Variovorax paradoxus S110] Length = 381 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 24/186 (12%), Positives = 48/186 (25%), Gaps = 8/186 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D L N++ K GV L +K + + + G + +L Sbjct: 21 LDTPALLLDLGALTRNIERMAAFAKARGVGLRPHVKTHKSVEIARRQVAAGAIGVSCVTL 80 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVS-----QLNKFKDKAQKLH 115 E + + + + A +I V+ + N A L Sbjct: 81 GEAEVMVKAGIPDVLITSPAVTPSKIARVVKLARLAGPGGMMVVVDDPRNAADLAAATLG 140 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 L + +++ E + + GL + Sbjct: 141 LPHPLEVLVDYGAG--YNRTGAASEAQVLELARRIAAEPRLKLRGLQAYAGNLQHIVDRE 198 Query: 176 SAMLKN 181 Sbjct: 199 QRSAAA 204 >gi|114569759|ref|YP_756439.1| alanine racemase [Maricaulis maris MCS10] gi|114340221|gb|ABI65501.1| alanine racemase [Maricaulis maris MCS10] Length = 366 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 76/337 (22%), Gaps = 37/337 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYMD----GTT 56 P +ID + N + A V + +K A + L Sbjct: 15 PRLIIDLAAIKRNYAALQTLAPTASVGAV--VKANGYGLGAAQVVPALADAGCRCFYVAH 72 Query: 57 SSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 +S E + +N + E+ + + N + QL + A Sbjct: 73 TSEAREAREALAGRPADIFVFN-GFWPSELAELRQLSLFPVINDLQQLEDLRALA--PDL 129 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + + +S + + +I++ + + L Sbjct: 130 PCAIHFDTGMSRLG-----LDAAETEALLADPARIDALDVRQIMSHLACSDDPDHPLNEQ 184 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + + G + + + L EP A Sbjct: 185 QRQRFERIRHALPGIPASLSNSTGTLLGQAYHFDMLRPGLALFSGMPAPGQASPFEPVVA 244 Query: 237 IVTNT-TTLNTTVLDISENIKNLVIVDS---------SVEAHVPDYLLYQESATIYPNTG 286 I D + + + G Sbjct: 245 IDAPILQIRTLQPGDTVGYGACWTADRPRRVATVAAGYADGLLRAFGNGGY-----GRIG 299 Query: 287 PYTAMVCGRSCLAGDIFGEFHF--EKPVKIGDRISFE 321 + GR + D+ E+PV+ GD + F Sbjct: 300 ETQVPILGRV--SMDLICVDIDAVEEPVRPGDPVRFL 334 >gi|306841724|ref|ZP_07474411.1| metal-activated pyridoxal protein [Brucella sp. BO2] gi|306288254|gb|EFM59638.1| metal-activated pyridoxal protein [Brucella sp. BO2] Length = 355 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 90/324 (27%), Gaps = 15/324 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP L+D +++ N++ A AGVKL +K + G T L Sbjct: 11 VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + YN+ ++ + I TV AQ+ + Sbjct: 71 GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQRFMNEKR 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + P I + + L Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAR---IIEKSAGLCFGGLMTYPATGRADEAERWL 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + E IS GG P + + + Y + + G A + Sbjct: 188 RAARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + + +S I+D+ +A D L + + A V G S Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301 Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322 G + G+ + IGDR+ D Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322 >gi|224417721|ref|ZP_03655727.1| arginine decarboxylase [Helicobacter canadensis MIT 98-5491] gi|253827066|ref|ZP_04869951.1| arginine decarboxylase [Helicobacter canadensis MIT 98-5491] gi|313141263|ref|ZP_07803456.1| arginine decarboxylase [Helicobacter canadensis MIT 98-5491] gi|253510472|gb|EES89131.1| arginine decarboxylase [Helicobacter canadensis MIT 98-5491] gi|313130294|gb|EFR47911.1| arginine decarboxylase [Helicobacter canadensis MIT 98-5491] Length = 618 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 31/299 (10%), Positives = 79/299 (26%), Gaps = 47/299 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLNQYMD-- 53 P + + ++ +N+ K + +K + + Q + Sbjct: 46 PLLIRFPHLMKKQVEKIFSHFENSIKEYHYKGKFKAVFPIKVNHFPNFILPLMEQTQNRC 105 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-- 110 G + S E+++ +KD E+ ++ + + + + Sbjct: 106 YGLEAGSKSELIIAMAYTNENAPITVNGFKDKEMISLGFIAAKMGHDITLTIEGLNELET 165 Query: 111 ------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------K 156 A S I A S+ G + +E+ + Sbjct: 166 IIEVAKAMGKPYPKIGLRIRLHSTGVGIWAKSGGINSKFGLTATELVEAIYLLQKNKLLE 225 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVK 212 + FH + L+ + + +++GGG+ Y Sbjct: 226 QFTMIHFHIGSQISDIAPLKKALREAGNIYAELRKMGAKNLNNVNIGGGLAVEYTQYEAY 285 Query: 213 DFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G + + L + VL++ Sbjct: 286 QNRNYTLGEFSGNVIFTLKEIAKNKKEPEPDIFIESGRYVSASHAVLISPVLELFSQEY 344 >gi|114562874|ref|YP_750387.1| arginine decarboxylase [Shewanella frigidimarina NCIMB 400] gi|122299985|sp|Q083L6|SPEA_SHEFN RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|114334167|gb|ABI71549.1| arginine decarboxylase [Shewanella frigidimarina NCIMB 400] Length = 636 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 88/312 (28%), Gaps = 51/312 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-----NQY 51 P + Q L + +++ +A L+ +K + + + ++ Sbjct: 61 PVLVRFPQILHHRVESLCEAFNDAIKKYDYQNDYLLVYPIKVNQQKTVVEEILASQKSKE 120 Query: 52 M--DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 + G + S E+M L + N I L + I+ +S Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDKEYIRLALIGEKLGHKVYIVLEKMS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153 +L +A+KL L + +++ + + G ++ + Sbjct: 181 ELKMVLIEAEKLGITPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLKVIAELKSAN 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + ++ L FH + + + E I+ +GGG+ Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRQLGASIDCFDVGGGLAVDYDGTR 300 Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253 + + L + +Y + E G + + L T V+ Sbjct: 301 SQSNNSMNYGLNEYANNIVNVLTDLCNEYEQPMPRIISESGRHLTAHHAVLITDVIGTEA 360 Query: 254 NIKNLVIVDSSV 265 + S Sbjct: 361 YQPENIQEPSED 372 >gi|328470011|gb|EGF40922.1| arginine decarboxylase [Vibrio parahaemolyticus 10329] Length = 636 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 29/248 (11%), Positives = 65/248 (26%), Gaps = 27/248 (10%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-------GTTSSSLYEVM--LGHEK 69 + L+ +K + D + G + S E++ L + Sbjct: 83 QAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLETKQLGLEAGSKPELLAVLALAQ 142 Query: 70 FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G N + L + I+ +S+L+ ++A+ L K L + Sbjct: 143 QGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRI 202 Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172 ++ + + G + + + + FH + + Sbjct: 203 RLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREGSLDAMQLVHFHLGSQMANIRDV 262 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 E IE+ +GGG+ + +Y+ I Sbjct: 263 RNGVNESARFYCELRALGANIEYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVNT 321 Query: 233 PGEAIVTN 240 G+ Sbjct: 322 VGDVCQQY 329 >gi|308095303|ref|ZP_05904841.2| arginine 2-monooxygenase [Vibrio parahaemolyticus Peru-466] gi|308085161|gb|EFO34856.1| arginine 2-monooxygenase [Vibrio parahaemolyticus Peru-466] Length = 636 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 29/248 (11%), Positives = 65/248 (26%), Gaps = 27/248 (10%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-------GTTSSSLYEVM--LGHEK 69 + L+ +K + D + G + S E++ L + Sbjct: 83 QAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLETKQLGLEAGSKPELLAVLALAQ 142 Query: 70 FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G N + L + I+ +S+L+ ++A+ L K L + Sbjct: 143 QGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRI 202 Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172 ++ + + G + + + + FH + + Sbjct: 203 RLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREGSLDAMQLVHFHLGSQMANIRDV 262 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 E IE+ +GGG+ + +Y+ I Sbjct: 263 RNGVNESARFYCELRALGANIEYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVNT 321 Query: 233 PGEAIVTN 240 G+ Sbjct: 322 VGDVCQQY 329 >gi|28900025|ref|NP_799680.1| arginine decarboxylase [Vibrio parahaemolyticus RIMD 2210633] gi|153837551|ref|ZP_01990218.1| arginine decarboxylase [Vibrio parahaemolyticus AQ3810] gi|260365955|ref|ZP_05778442.1| arginine 2-monooxygenase [Vibrio parahaemolyticus K5030] gi|260899760|ref|ZP_05908155.1| arginine 2-monooxygenase [Vibrio parahaemolyticus AQ4037] gi|308094977|ref|ZP_05892959.2| arginine 2-monooxygenase [Vibrio parahaemolyticus AN-5034] gi|48474828|sp|Q87JS8|SPEA_VIBPA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|28808308|dbj|BAC61513.1| biosynthetic arginine decarboxylase [Vibrio parahaemolyticus RIMD 2210633] gi|149749147|gb|EDM59952.1| arginine decarboxylase [Vibrio parahaemolyticus AQ3810] gi|308092545|gb|EFO42240.1| arginine 2-monooxygenase [Vibrio parahaemolyticus AN-5034] gi|308110386|gb|EFO47926.1| arginine 2-monooxygenase [Vibrio parahaemolyticus AQ4037] gi|308112871|gb|EFO50411.1| arginine 2-monooxygenase [Vibrio parahaemolyticus K5030] Length = 640 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 29/248 (11%), Positives = 65/248 (26%), Gaps = 27/248 (10%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-------GTTSSSLYEVM--LGHEK 69 + L+ +K + D + G + S E++ L + Sbjct: 87 QAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLETKQLGLEAGSKPELLAVLALAQ 146 Query: 70 FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G N + L + I+ +S+L+ ++A+ L K L + Sbjct: 147 QGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRI 206 Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172 ++ + + G + + + + FH + + Sbjct: 207 RLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREGSLDAMQLVHFHLGSQMANIRDV 266 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 E IE+ +GGG+ + +Y+ I Sbjct: 267 RNGVNESARFYCELRALGANIEYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVNT 325 Query: 233 PGEAIVTN 240 G+ Sbjct: 326 VGDVCQQY 333 >gi|254227886|ref|ZP_04921316.1| arginine decarboxylase [Vibrio sp. Ex25] gi|262396126|ref|YP_003287979.1| biosynthetic arginine decarboxylase [Vibrio sp. Ex25] gi|151939382|gb|EDN58210.1| arginine decarboxylase [Vibrio sp. Ex25] gi|262339720|gb|ACY53514.1| biosynthetic arginine decarboxylase [Vibrio sp. Ex25] Length = 640 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 29/248 (11%), Positives = 65/248 (26%), Gaps = 27/248 (10%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-------GTTSSSLYEVM--LGHEK 69 + L+ +K + D + G + S E++ L + Sbjct: 87 QAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLETKQLGLEAGSKPELLAVLALAQ 146 Query: 70 FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G N + L + I+ +S+L+ ++A+ L K L + Sbjct: 147 QGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRI 206 Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172 ++ + + G + + + + FH + + Sbjct: 207 RLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREGSLDAMQLVHFHLGSQMANIRDV 266 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 E IE+ +GGG+ + +Y+ I Sbjct: 267 RNGVNESARFYCELRALGANIEYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVNT 325 Query: 233 PGEAIVTN 240 G+ Sbjct: 326 VGDVCQQY 333 >gi|223936213|ref|ZP_03628126.1| alanine racemase domain protein [bacterium Ellin514] gi|223895075|gb|EEF61523.1| alanine racemase domain protein [bacterium Ellin514] Length = 368 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 35/133 (26%), Gaps = 9/133 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSS 58 + TP L+D L N+D + +G++ K + Q G T + Sbjct: 17 VDTPSLLLDADALQANIDRMAAFFVNRPSGLRPHF--KSHKCTKIVRLQMQAGAVGITCA 74 Query: 59 SLYEVM-LGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 L E L A I + ++ A Sbjct: 75 KLGEAEVLADAGIREILIANQIVGHVKIARLIQLAKRAAPIVAVDSEENARMLSAAASAA 134 Query: 115 HKKIGLRINPSVS 127 + +I + + Sbjct: 135 NVEIRALVEVDIG 147 >gi|3421157|gb|AAC68518.1| arginine decarboxylase [Capsella bursa-pastoris] Length = 407 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 74/245 (30%), Gaps = 28/245 (11%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +K + + + ++ G + S E++L + +K Sbjct: 1 YQGVYPVKGNQDRFVVEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ + +QK++ + GLR +S + Sbjct: 61 DAEYISLALLGRKLALNTVIVLEQEEELDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTTQIVRVVRKLSQSGMLDRLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + + + ++ Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYA-EAVVASVRFVCDRSSV 238 Query: 244 LNTTV 248 + + Sbjct: 239 KHPVI 243 >gi|218886631|ref|YP_002435952.1| arginine decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757585|gb|ACL08484.1| arginine decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 645 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 79/315 (25%), Gaps = 53/315 (16%) Query: 11 KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58 + L + + + + A + + +K + + + Q+ G Sbjct: 79 ENILDSQITSLHQSFRKAIGSLGYKGEYRGIFPIKVNQQQQVVEKIAQFGSRYHHGLEVG 138 Query: 59 SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 S E++ + E YKD E + + + + L + L + Sbjct: 139 SKAELIAAVSQLRDHEACLVCNGYKDEEFIDLGLHAVRMGYKCFFVLEMASELPLILERS 198 Query: 118 IGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLM 162 L + P + D S G + + L Sbjct: 199 KCLGVRPLIGVRAKLSVKAGGHWTDSGGERSTFGLTTAQIVDVVDQLKDHDMLDCFQLLH 258 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207 +H + + I + ++ LGGG+ Sbjct: 259 YHLGSQVPNIRDIRAAVMEACRIYGGLVAEGAAMGYLDLGGGLAVDYDGSHTNYVSSRNY 318 Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLD-----ISENIKN 257 D D + + ++ I E G A V + L +LD I Sbjct: 319 SLDEYCADIIEAVMNILDEEGIAHPHIVTESGRATVAYYSMLLFNILDVSRVEIGNLPDI 378 Query: 258 LVIVDSSVEAHVPDY 272 L ++ + Sbjct: 379 LPDDCPEPVRNMREA 393 >gi|3421161|gb|AAC68519.1| arginine decarboxylase [Arabidopsis arenosa] Length = 407 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 74/245 (30%), Gaps = 28/245 (11%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +K + + + ++ G + S E++L + +K Sbjct: 1 YQGVYPVKGNQDRFVVEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ + +QK++ + GLR +S + Sbjct: 61 DAEYISLALLGRKLALNTVIVLEQEEELDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTTQIVRVVRKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + + + ++ Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYA-EAVVASVRFVCDRSSV 238 Query: 244 LNTTV 248 + + Sbjct: 239 KHPVI 243 >gi|171317786|ref|ZP_02906967.1| alanine racemase domain protein [Burkholderia ambifaria MEX-5] gi|171097070|gb|EDT41925.1| alanine racemase domain protein [Burkholderia ambifaria MEX-5] Length = 376 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 79/322 (24%), Gaps = 31/322 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ NN+ GVK +K + D + G T S+L Sbjct: 6 VNTPAALIDVDRMRNNIARMQAHLDALGVKFRPHVKTTKCQHVVDAQIAAGAQGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V ++ II +++ + A Sbjct: 66 KEAEQFFAA-GVRDIVYAVGMIPAKLGQALALRRQGCDLKIIADSLETAHAI--AAFGRE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE------- 168 + V RP L + + G++ H Sbjct: 123 HGERFDVWIEVDVDGHR--SGIRPDDGLLIDVGRALVDGGMALGGVLAHAGSSYEYDTHN 180 Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + + +S+G + + + Sbjct: 181 ALIAIAEQERSRTVHAAERLRAAGLPCPVVSIG-STPTALSAANLDGVTEVRAGVYVLFD 239 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 + ++ A+ ++ TTV+ + + D S Sbjct: 240 LVMHNIGVCALADIALSVLTTVIGHQQEKGWA----------IVDAGWMAMSRDRGTQRQ 289 Query: 287 PYTAMVCGRSCLAGDIFGEFHF 308 GD+ GE+ Sbjct: 290 ARDFGYGQVCTEDGDVLGEYVM 311 >gi|3421164|gb|AAC68520.1| arginine decarboxylase [Sisymbrium altissimum] gi|3421166|gb|AAC68521.1| arginine decarboxylase [Stanleya pinnata] Length = 407 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 34/277 (12%), Positives = 78/277 (28%), Gaps = 29/277 (10%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +K + + + ++ G + S E++L + +K Sbjct: 1 YQGVYPVKGNQDRFVVEDIVRFGSPFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTTQIVRVMRKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 E ++ I +GGG+ + + E+Y+ + V + + Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYAEAVVASVR--FVCDRRS 237 Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280 + V+ + + V A Sbjct: 238 VKHPVICSESGRAIVSHHSVLIFEAVSAVKPMAHQAN 274 >gi|212723010|ref|NP_001132198.1| hypothetical protein LOC100193626 [Zea mays] gi|194693732|gb|ACF80950.1| unknown [Zea mays] Length = 639 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 26/239 (10%), Positives = 64/239 (26%), Gaps = 23/239 (9%) Query: 12 QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59 L N ++T + + + + +K + + ++ G + S Sbjct: 73 DVLKNRIETLHNAFNSAMESTGYTSRYQGVFPIKVNQNKYVVQDMVRFGQQWNYGLEAGS 132 Query: 60 LYEVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E+++ + + YKD + A+ + + N + L ++ A L Sbjct: 133 KPELLIAMSCLPVTEAEPKPYLICNGYKDADYIALALSARAMGLNPIIVLEMEEELAIVL 192 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + L+ + F + + + + Sbjct: 193 DQYRKLQQKLPDD------DAVRKKFEPIIGIRAKLLTKLPGHFGSTAGKHGKFGMLADQ 246 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + + + KE Q+ +G I T K Y + +L Sbjct: 247 IYEVAETLGKEGKLHWLQLLHFHIGSMIPTTGKVYDAVSEAAGIYCNLVNEHGAKWLAT 305 >gi|299472468|emb|CBN77253.1| Ornithine decarboxylase [Ectocarpus siliculosus] Length = 320 Score = 46.7 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 19/78 (24%), Gaps = 3/78 (3%) Query: 263 SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIG-DRISF 320 H + V G +C D ++ G D + F Sbjct: 216 HCQTDH-GPSTSDALAHCRTACRNELPCTVWGPTCDGLDCVCRMTQLPDDMEPGRDWLFF 274 Query: 321 EDVAGYNINRKNWFNGIN 338 DV FNG+ Sbjct: 275 PDVGIRGGADVTGFNGLK 292 >gi|269965523|ref|ZP_06179641.1| biosynthetic arginine decarboxylase [Vibrio alginolyticus 40B] gi|269829886|gb|EEZ84117.1| biosynthetic arginine decarboxylase [Vibrio alginolyticus 40B] Length = 640 Score = 46.7 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 29/248 (11%), Positives = 66/248 (26%), Gaps = 27/248 (10%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-------GTTSSSLYEVM--LGHEK 69 + L+ +K + D + G + S E++ L + Sbjct: 87 QAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLETKQLGLEAGSKPELLAVLALAQ 146 Query: 70 FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G N + L + I+ +S+L+ ++A+ L K L + Sbjct: 147 QGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRI 206 Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172 ++ + + G + + + + FH + + Sbjct: 207 RLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREGNLDAMQLVHFHLGSQMANIRDV 266 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 E IE+ +GGG+ + +Y+ I Sbjct: 267 RNGVNESARFYCELRALGANIEYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVNT 325 Query: 233 PGEAIVTN 240 G+ + Sbjct: 326 VGDVCLQY 333 >gi|254488689|ref|ZP_05101894.1| metal-activated pyridoxal enzyme [Roseobacter sp. GAI101] gi|214045558|gb|EEB86196.1| metal-activated pyridoxal enzyme [Roseobacter sp. GAI101] Length = 351 Score = 46.7 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 40/330 (12%), Positives = 80/330 (24%), Gaps = 26/330 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTS--S 58 + TP LID N+D + L +K + Q G T Sbjct: 6 LDTPAVLIDLDIAEANIDRFQAHCDAHDLNLRPHIKTHKLPMLAKRQVQAGAIGITCQKV 65 Query: 59 SLYEVMLGHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E M+ +N +++ + + ++ Sbjct: 66 SEAEAMISEGGIDDVLITFNILGTGKLSRLRAIADKVRLSVVADNTTTIDGLAGAFSDAD 125 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNNCENKSFL 173 + + + R + + + + + Sbjct: 126 APLSVLVECDTGA--------ARCGVATPQAAGELATYIAGQPGLTFGGLMTYPPAEQER 177 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + L + + IS GG L+ Sbjct: 178 FVQSWLTEAKDLIEASGLDVPVISNGGSPGM---WQAQDVPVATEYRIGTYVFNDRSLQD 234 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293 + LN V +S +N ++D+ + D L + G V Sbjct: 235 RGVCTWDDCALNVLVTVVSVPARNRAVIDAGTKVLTSDLLGLDGHGHVL---GRPDIEVA 291 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRI-SFED 322 G S G + + +K+GDR+ + Sbjct: 292 GLSEEHGVLMADSI---NLKVGDRLRIIPN 318 >gi|91228096|ref|ZP_01262138.1| arginine decarboxylase [Vibrio alginolyticus 12G01] gi|91188214|gb|EAS74514.1| arginine decarboxylase [Vibrio alginolyticus 12G01] Length = 640 Score = 46.7 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 29/248 (11%), Positives = 66/248 (26%), Gaps = 27/248 (10%) Query: 19 DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-------GTTSSSLYEVM--LGHEK 69 + L+ +K + D + G + S E++ L + Sbjct: 87 QAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLETKQLGLEAGSKPELLAVLALAQ 146 Query: 70 FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 G N + L + I+ +S+L+ ++A+ L K L + Sbjct: 147 QGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRI 206 Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172 ++ + + G + + + + FH + + Sbjct: 207 RLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREGNLDAMQLVHFHLGSQMANIRDV 266 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 E IE+ +GGG+ + +Y+ I Sbjct: 267 RNGVNESARFYCELRALGANIEYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVNT 325 Query: 233 PGEAIVTN 240 G+ + Sbjct: 326 VGDVCLQY 333 >gi|167646643|ref|YP_001684306.1| alanine racemase domain-containing protein [Caulobacter sp. K31] gi|167349073|gb|ABZ71808.1| alanine racemase domain protein [Caulobacter sp. K31] Length = 383 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 1/70 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP +ID+ L N+ + GVKL K + + + G + + Sbjct: 20 LNTPVLVIDRPALERNIARMARFAADKGVKLRPHAKTHKSVDIAKLQVAAGAVGLCCAKI 79 Query: 61 YEVMLGHEKF 70 E E Sbjct: 80 GEAEALAEGG 89 >gi|218198899|gb|EEC81326.1| hypothetical protein OsI_24498 [Oryza sativa Indica Group] Length = 424 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 4/48 (8%), Positives = 13/48 (27%), Gaps = 5/48 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM 52 P + D + + + + A K + + + + Sbjct: 27 PVWAYDADIISQRIAQLRHFD-----TIRFAQKACSNIHILRLMREQG 69 >gi|262274662|ref|ZP_06052473.1| biosynthetic arginine decarboxylase [Grimontia hollisae CIP 101886] gi|262221225|gb|EEY72539.1| biosynthetic arginine decarboxylase [Grimontia hollisae CIP 101886] Length = 639 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 80/299 (26%), Gaps = 53/299 (17%) Query: 5 PYYLIDKQKLLNN----LDTALYIRKNAGVK----LLLALKCFAAWGMF-DTLNQYMD-- 53 P + + L + G + L+ +K + + L Sbjct: 61 PVLVRFPEILHHRVDSLCAHFNDAIAEYGYEGEYLLVYPIKVNQQKEVVGEILKSQYASQ 120 Query: 54 ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF 107 G + S E+M L + N YKD E + + + L K Sbjct: 121 KRQLGLEAGSKPELMAVLAMAQQASSVIVCN-GYKDREYIRLALIGEKLGHEVYIVLEKL 179 Query: 108 KDKAQKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIE-------- 152 + L + L + P S K S+ G + Sbjct: 180 SELDTVLTEAKALGVKPRLGLRARLASQGKGKWQASGGEKSKFGLSASQVMTVMNRLREL 239 Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-- 207 + + L FH + + + + + F I + +GGG+ + Sbjct: 240 DMLDTLQLLHFHLGSQIANIRDVRSGVNEAARVFAELYQMGAGITTLDVGGGLAVDYEGT 299 Query: 208 --------DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDI 251 +Y +++ + +I E G + + L T V+ + Sbjct: 300 RSQSSCSMNYSQREYANNVVFTIGDVCKAFNIKMPRIISESGRNLTAHHAVLITDVMGV 358 >gi|242046596|ref|XP_002400274.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215497604|gb|EEC07098.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 159 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 2/92 (2%) Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHF 308 +D+ N N V +++ + D LY + + G +C D E Sbjct: 16 VDVFINESNNNCVCANLYQFL-DIQLYPLKPP-FDRPRNVLTSLWGATCNPIDRMEERTL 73 Query: 309 EKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340 V + + + +++ Y++ FNG P Sbjct: 74 MFDVSVDEWLFMDNMGAYSLIGVTGFNGFGFP 105 >gi|237752646|ref|ZP_04583126.1| arginine decarboxylase [Helicobacter winghamensis ATCC BAA-430] gi|229376135|gb|EEO26226.1| arginine decarboxylase [Helicobacter winghamensis ATCC BAA-430] Length = 618 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 90/300 (30%), Gaps = 49/300 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLNQYM--- 52 P + + ++ + + K + +K + + Q + Sbjct: 46 PLLVRFPHLMKKQVEKIFTNFEASIKEHHYKGRFKAVFPIKVNHYPNFILPLMEQNIKRC 105 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106 G + S E+++ +KD E+ A + + T+ +++L Sbjct: 106 YGLEAGSKSELIIAMAYTNDNAPITVNGFKDKEMISLGFIAAKMGHDITLTIEGLNELET 165 Query: 107 FKDKAQ---KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EI 155 + A+ K + IGLRI S I A S+ G + +E+ + Sbjct: 166 IIEVAKTLGKPYPNIGLRIRL-HSTGVGIWAKSGGINSKFGLTATELVEAISLLQKNKLL 224 Query: 156 KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPV 211 + FH + L+ + + +++GGG+ + Sbjct: 225 DKFTMIHFHIGSQISDIAPLKKALREAGNIYAELRKMGAKNLNNVNIGGGLAVEYAQHEN 284 Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 + + ++ I++E G + + L + VL++ Sbjct: 285 TQNRNYTLAEFSGNVVFTLKEIAKNKKEPEPDIFIESGRYVSASHAVLISPVLELFSQEY 344 >gi|3421144|gb|AAC68514.1| arginine decarboxylase [Boechera stricta] Length = 407 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 61/204 (29%), Gaps = 27/204 (13%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +K + + + ++ G + S E++L + +K Sbjct: 1 YQGVYPVKGNQDRFVVEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ + +QK++ + GLR +S + Sbjct: 61 DAEYISLALLGRKLALNTVIVLEQEEELDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTTQIVRVVRKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDK 207 E ++ I +GGG+ Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYD 203 >gi|254513257|ref|ZP_05125322.1| metal-activated pyridoxal enzyme [Rhodobacteraceae bacterium KLH11] gi|221532261|gb|EEE35257.1| metal-activated pyridoxal enzyme [Rhodobacteraceae bacterium KLH11] Length = 351 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 51/211 (24%), Gaps = 16/211 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTS--S 58 I TP L+D N+D + + +K + + G T Sbjct: 6 IDTPAVLVDLDIAEANIDRFQGHCAKHELAVRPHIKTHKLPKLARRQLEAGAIGITCQKV 65 Query: 59 SLYEVMLGHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E M+ +N A +++ + ++ Sbjct: 66 SEAEAMIAEGGIDDVLITFNILGDAKLARLRALSEKVRLSVVADNTETVDGLSKSFSDAA 125 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNNCENKSFL 173 +G+ + R E+ +D V L + Sbjct: 126 TPLGVLVECDTGA--------ARCGVTTPEQARDLARYIDSQPGVTFLGLMTYPPVGQEV 177 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHF 204 L ++E + +S GG Sbjct: 178 AVQEWLTRAKREVEEAGLPVHVVSHGGSPGM 208 >gi|319647068|ref|ZP_08001294.1| hypothetical protein HMPREF1012_02332 [Bacillus sp. BT1B_CT2] gi|317390892|gb|EFV71693.1| hypothetical protein HMPREF1012_02332 [Bacillus sp. BT1B_CT2] Length = 383 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 30/327 (9%), Positives = 84/327 (25%), Gaps = 17/327 (5%) Query: 4 TP-YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYMDG-TTSSSL 60 +P Y++D + N + ++L K F + + + G + Sbjct: 27 SPNTYVLDLDTVKKNAKVLSEKARKQDIELFFMTKQFGRNPLVAQAIAESGIGKAVAVDP 86 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 +E + + H ++ + + + D + ++ A+K+ +K Sbjct: 87 WEAITLSQNGIKIGHVGHLVQIPIHMIPAILELHPDYVTVFSLENAQNINRVAKKMGRKQ 146 Query: 119 GLRINPSVSYSKFILADPNRPFS----RLGEKCKDKIESEIKNVN-GLMFHNNCENKSFL 173 + + + + E + EI + + Sbjct: 147 KVFLRIANKEDYIYKGQEGGFTFEQIVKDIESIEQLEGLEIAGLTSFPCILIQDGLPAVT 206 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 A ++ ++ + +++ ++ + + Sbjct: 207 PNVASMQTVKSFLMERGYKKLEMNMPSATSCATMKLLKENGATQGEPGHALIGTTPIHAT 266 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293 + T V IS + + +H+ L+ Sbjct: 267 KQLAERPAMVYVTEVSHISNHHAYVFGGGFYPRSHMKAALVG------TNKDHLKKVQAI 320 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISF 320 + D +G + K+GD F Sbjct: 321 EMTPDHIDYYGSLNTV-EAKVGDTAIF 346 >gi|52079158|ref|YP_077949.1| putative alanine racemase [Bacillus licheniformis ATCC 14580] gi|52784525|ref|YP_090354.1| hypothetical protein BLi00725 [Bacillus licheniformis ATCC 14580] gi|52002369|gb|AAU22311.1| putative alanine racemase [Bacillus licheniformis ATCC 14580] gi|52347027|gb|AAU39661.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580] Length = 383 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 30/327 (9%), Positives = 84/327 (25%), Gaps = 17/327 (5%) Query: 4 TP-YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYMDG-TTSSSL 60 +P Y++D + N + ++L K F + + + G + Sbjct: 27 SPNTYVLDLDTVKKNAKVLSEKARKQDIELFFMTKQFGRNPLVAQAIAESGIGKAVAVDP 86 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 +E + + H ++ + + + D + ++ A+K+ +K Sbjct: 87 WEAITLSQNGIKIGHVGHLVQIPIHMIPAILELHPDYVTVFSLENAQNINRVAKKMGRKQ 146 Query: 119 GLRINPSVSYSKFILADPNRPFS----RLGEKCKDKIESEIKNVN-GLMFHNNCENKSFL 173 + + + + E + EI + + Sbjct: 147 KVFLRIANKEDYIYKGQEGGFTFEQIVKDIESIEQLEGLEIAGLTSFPCILIQDGLPAVT 206 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 A ++ ++ + +++ ++ + + Sbjct: 207 PNVASMQTVKSFLMERGYKKLEMNMPSATSCATMKLLKENGATQGEPGHALIGTTPIHAT 266 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293 + T V IS + + +H+ L+ Sbjct: 267 KQLAERPAMVYVTEVSHISNHHAYVFGGGFYPRSHMKAALVG------TNKDHLKKVQAI 320 Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISF 320 + D +G + K+GD F Sbjct: 321 EMTPDHIDYYGSLNTV-EAKVGDTAIF 346 >gi|301061165|ref|ZP_07201954.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300444707|gb|EFK08683.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 365 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 84/337 (24%), Gaps = 38/337 (11%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 TP+Y+ +++ L + +G L + +SL E Sbjct: 24 TPFYVYNEETLNEIFFDLSAMDALSG--LFYPYHLNFHQAVLQKAFDLDAYFRCNSLLEA 81 Query: 64 MLGHEKF---GGETHAY---NVAYKDCEIDAVLSNCDTIIFN---TVSQLNKFKDKAQKL 114 + F + + ++CE A + + + L F+DK+ L Sbjct: 82 DHLRDHFPKLPPSRIFFLSDHKHKRECEDAAHQGLHVAVRADKNTMNACLEAFQDKSIFL 141 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFHNNCEN 169 +G I S K P SR C ++ +GL Sbjct: 142 CLDMGDEIPQSGIPKKTTHGIYVCPDSRFLSLCSQDEKISLFKTLAHQFSGLSTLVLGNA 201 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 + S M E ++ I+ + + V L + + + Sbjct: 202 ANNESISPMDGMELSEIETYLEAIQEACPQFELRLELPMHLVSYAGALLVKALASGTAEG 261 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 + N L + I NL + Y+ + Sbjct: 262 MPYIQTDLPMN-DALYHEIHGTPHQIVNLSRPEEERIILTRMIQQYKHAENGIVYLNTPC 320 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 V+ GD I + Y Sbjct: 321 F---------------------VEQGDIILLTHMGAY 336 >gi|254513241|ref|ZP_05125306.1| threonine aldolase family protein [Rhodobacteraceae bacterium KLH11] gi|221532245|gb|EEE35241.1| threonine aldolase family protein [Rhodobacteraceae bacterium KLH11] Length = 382 Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 20/193 (10%), Positives = 52/193 (26%), Gaps = 14/193 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D N++ A + + G LK + + G +S+ Sbjct: 27 LDTPCLLVDLPVFKQNIERAAQMVADTGKAFTPHLKAHKTPDIAEMQCAASAAGFCVASI 86 Query: 61 YEVML-GHEKFGGETH----AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + T + + T++ +T + + + Sbjct: 87 GEAEVFAKYGDTPLTITSATVTGRQMARIAALSKQVSELTVVVDTPPNIRALANLDATVS 146 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 I + + S ++ ++ + + N+ GL + + Sbjct: 147 VLIDIDMGRGRSACT--------EEAQAVHLAREIMGAPNLNLAGLQCYAGQLSHMNDFH 198 Query: 176 SAMLKNIEKEFGH 188 + + Sbjct: 199 DREEQAAASDRRA 211 >gi|159031803|dbj|BAF91873.1| arginine decarboxylase [Nicotiana benthamiana] Length = 199 Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 59/200 (29%), Gaps = 27/200 (13%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +KC + + + ++ G + S E++L E +K Sbjct: 1 YQGVYPVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPELLLAMSCLCKGSAEGLLICNGFK 60 Query: 83 DCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILA 134 D E L I+ +L+ D ++ + IGLR +S + Sbjct: 61 DAEYISLALVARKLMLNTVIVLEQEEELDLVIDLSRNMAVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFL---CFSAMLKNIE 183 + G + + L FH + S I Sbjct: 121 TSGEKG-KFGLTTTQIVRVVKKLEESGMLDCLQLLHFHIGSQIPSTELLADGVGEAAQIY 179 Query: 184 KEFGHFITQIEWISLGGGIH 203 E +++I +GGG+ Sbjct: 180 CELIRLGAGMKFIDIGGGLG 199 >gi|3421138|gb|AAC68512.1| arginine decarboxylase [Carica papaya] Length = 408 Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 24/203 (11%), Positives = 59/203 (29%), Gaps = 25/203 (12%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +K + + + ++ G + S E++L + +K Sbjct: 1 YQGVYPVKSNQDRFVVEDIVKFGSSFRFGLEAGSKPELLLAMSCLCKGSPDAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY-SKFILAD 135 D E ++ I+ +++ D +QKL K + + + Sbjct: 61 DAEYISLALFARKLALNTVIVLEQEEEIDLVIDLSQKLSVKPVIGVRAKLRTKHSGHFGS 120 Query: 136 PNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNNCENKS---FLCFSAMLKNIEK 184 + + G + + + L FH + S I Sbjct: 121 TSGEKGKFGLTTTQILRVVGKLKQAGMLDCLQLLHFHIGSQIPSTALLSDGVGEAAQIYC 180 Query: 185 EFGHFITQIEWISLGGGIHFTDK 207 E +++ + +GGG+ Sbjct: 181 ELTRLGARMQVVDIGGGLGIDYD 203 >gi|89075860|ref|ZP_01162239.1| biosynthetic arginine decarboxylase [Photobacterium sp. SKA34] gi|89048389|gb|EAR53966.1| biosynthetic arginine decarboxylase [Photobacterium sp. SKA34] Length = 639 Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 80/303 (26%), Gaps = 51/303 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-------N 49 P + + + + +D+ + + +K + + Sbjct: 61 PVLVRFPEVMHHRVDSLCSVFNQTIENYGYTGDYLAVYPIKVNQQQEVVSEILKSQYAKQ 120 Query: 50 QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 Q G + S E+M L + N I L + I+ +S Sbjct: 121 QRQLGLEAGSKPELMAVLAMAQEASSVIVCNGYKDKEYIRLALIGEKLGHEVYIVLEKLS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ES 153 +L ++A++L L + S K S+ G + Sbjct: 181 ELRIILEQAKELGVTPRLGLRARLASQGKGKWQASGGEKSKFGLSASQVLTVVDELRQRD 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + L FH + + + E I + +GGG+ + Sbjct: 241 MLDCLQLLHFHLGSQIASIRDVRNGVGEAGRVYAELKKIGVGITTVDVGGGLAVDYEGTR 300 Query: 211 VKDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 ++ C + + +I E G + + L T V+ I Sbjct: 301 CQNSCSMNYSINEYANNIVYVLGDICTEYDISMPRIISESGRNLTAHHAVLITDVVGIES 360 Query: 254 NIK 256 Sbjct: 361 YKP 363 >gi|284041650|ref|YP_003391990.1| alanine racemase domain protein [Conexibacter woesei DSM 14684] gi|283945871|gb|ADB48615.1| alanine racemase domain protein [Conexibacter woesei DSM 14684] Length = 372 Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 2/79 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP ++D+ L N++ + ++AGV L K + L+ G T + L Sbjct: 6 VDTPALVVDRDVLRANVEAMAALARDAGVALRPHAKTHKLPQVARMQLDAGAAGLTVAKL 65 Query: 61 YEVML-GHEKFGGETHAYN 78 E + AY Sbjct: 66 GEAEVFADAGVTDLLIAYP 84 >gi|227819408|ref|YP_002823379.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234] gi|227338407|gb|ACP22626.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234] Length = 352 Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 30/259 (11%), Positives = 72/259 (27%), Gaps = 16/259 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTS--S 58 I+TP L+D N+ G+++ +K M + + G T Sbjct: 5 IETPAVLVDLDIARRNVRAFQAYADRHGIRVRPHIKTHKLPQMAELQLEAGAVGITCQKV 64 Query: 59 SLYEVML-GHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 S E M+ G + YN A +++ + + ++ D Sbjct: 65 SEAEAMVDGSARIKDVLITYNILGEAKLARLARLNERLTLSVVADNAAVVDGLSDYFSGA 124 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 K + + + + + +E+ + + Sbjct: 125 QKPLTVLVECNTGAD----RCGVATPDEAAALARRIVEAA--GLRFGGLMTYPPVGAAAR 178 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + + + Q+ ++ GG + + Y+ + + G Sbjct: 179 VQSFMSEARRLIEADGLQVPTVTSGGTPSMMQAAEA--PVATEYRPGTYIYNDRSLVARG 236 Query: 235 EAIVTNTT-TLNTTVLDIS 252 A + T+ TV+ + Sbjct: 237 VATWDDCALTVLATVVSVP 255 >gi|149178497|ref|ZP_01857086.1| alanine racemase-like protein [Planctomyces maris DSM 8797] gi|148842710|gb|EDL57084.1| alanine racemase-like protein [Planctomyces maris DSM 8797] Length = 366 Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 40/331 (12%), Positives = 83/331 (25%), Gaps = 29/331 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTS--S 58 + TP ID + N+ + G KC + + G T Sbjct: 13 LDTPILCIDLDIMEANIQKMSDYILSRGKTWRPHEKCHKTPAIALAQMGAGAIGVTCAKV 72 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S EVM A + K I + +Q+ Sbjct: 73 SEAEVMAA-AGVKDILIANMIVGKTKWERVVSLCRHARPIIACDHYAQIEPLAKMCADAG 131 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 + ++ ++ + P + L E+ + G H Sbjct: 132 VVCRMMPEVNIGLNRV-GSRPGQDTLDLAMAIDKLEGVELAGIMGYEGHLLQIQDQAEKE 190 Query: 176 SAMLKN------IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 +++ + E +S GG + + Sbjct: 191 EKIIEAMRTLVGCKTTIEAKGIPCEIVSAGGT-GSYQITSNCEGITELQAGGGIFADPMY 249 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA--HVPDYLLYQESATIYPNTGP 287 + G + + ++ TV+ E + ++ + A + + Sbjct: 250 VNKCGLTGLDYSLSVLATVVSRPEKGRMVLDCGRKTMHPDFQLPLVKAWPDAEVTALSAE 309 Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 + A+ G + D +KIGD+I Sbjct: 310 HCAVTLGP--ESQD----------LKIGDKI 328 >gi|258545136|ref|ZP_05705370.1| arginine 2-monooxygenase [Cardiobacterium hominis ATCC 15826] gi|258519655|gb|EEV88514.1| arginine 2-monooxygenase [Cardiobacterium hominis ATCC 15826] Length = 637 Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 76/288 (26%), Gaps = 48/288 (16%) Query: 12 QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59 L N + A + + +K + + + ++ G + S Sbjct: 72 NLLENQIKLINESFSKAIADSNYRGKYRGVFPIKVNQQAQVIEDIVRFGKPWQHGLEAGS 131 Query: 60 LYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNC------DTIIFNTVSQLNKFKDKAQ 112 E+M+ YKD E + + T ++L + +Q Sbjct: 132 KAELMIALSMLSEPGPLIVCNGYKDREFVELGLGMTKLGFQVIFVIETPAELPIIVESSQ 191 Query: 113 KLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMF 163 + + + + S + S G + + L + Sbjct: 192 AMGVRPVIGVRAKLFSRVSGRWNATSGDRSMFGLNASQLVGVIDGLKAAGMLDCLQFLHY 251 Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207 H + + E + ++ LGGG+ Sbjct: 252 HLGSQIPNIRDIRTGVREACRYYVELVEEGAPMRFLDLGGGLAVDYDGSRTSAIHSRNYA 311 Query: 208 -DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251 + D + ++ ++ I E G + V +T L +LD+ Sbjct: 312 LEEYCVDVVETIQSVLDEKGIEHPTIVTESGRSTVAYSTVLMFNILDV 359 >gi|3421140|gb|AAC68513.1| arginine decarboxylase [Polanisia dodecandra] Length = 408 Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 59/203 (29%), Gaps = 25/203 (12%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +K + + + ++ G + S E++L E +K Sbjct: 1 YQGVYPVKGNQDRFVVEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY-SKFILAD 135 D E ++ I+ +L+ D +QK++ + + I + Sbjct: 61 DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGIRAKLRTKHSGHFGS 120 Query: 136 PNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIEK 184 + + G + + L FH + S A + Sbjct: 121 TSGEKGKFGLNTIQIVRVVRKLCQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLYC 180 Query: 185 EFGHFITQIEWISLGGGIHFTDK 207 E Q+ I +GGG+ Sbjct: 181 ELVRLGAQMRVIDVGGGLGIDYD 203 >gi|149915930|ref|ZP_01904454.1| alanine racemase-like protein [Roseobacter sp. AzwK-3b] gi|149810253|gb|EDM70099.1| alanine racemase-like protein [Roseobacter sp. AzwK-3b] Length = 387 Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 25/214 (11%), Positives = 62/214 (28%), Gaps = 18/214 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57 I+TP ++D L N+ K G++ + K + + + G Sbjct: 27 IQTPCLVLDLDALERNIRKMGDYAKAHGMRHRVHGKMHKSVDVAKLQVELGGACGVCCQK 86 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------ 111 S EV + G + + ++ L+ + T+ ++ + A Sbjct: 87 VSEAEV---FARGGIKDVLVSNQVREPAKIDRLARMPKLGARTICCVDDIDNVADLSAAA 143 Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169 + + I+ ++ + + ++ G M H + Sbjct: 144 QKHGTQIECLVEIDCGAGRCGVTQTADVVRIAKAIDAAPGLKFAGLQAYQGAMQHMDSYE 203 Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200 AM+++ + + + GG Sbjct: 204 DRKTKVDIAIAMVRDAVDALKADGIECDIVGGGG 237 >gi|13124555|sp|O81160|SPE2_THECC RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC gi|3421134|gb|AAC68511.1| arginine decarboxylase [Theobroma cacao] Length = 406 Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 24/203 (11%), Positives = 57/203 (28%), Gaps = 25/203 (12%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +K + + + ++ G + S E++L E +K Sbjct: 1 YQGVYPVKSNQDRFVVEDIVKFGSSFRFGLEAGSKPELLLAMSCLCKGNPEALLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY-SKFILAD 135 D E ++ I+ +++ D +QKL + + + + Sbjct: 61 DAEYISLALLARKLALKHVIVLEQEEEVDMVIDISQKLSVRPVIGVRAKLRTKHSGHFGS 120 Query: 136 PNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIEK 184 + + G + + L FH + S I Sbjct: 121 TSGEKGKFGLTTTQVLRVVKKLQDSGMLDCLQLLHFHIGSQIPSTALLSDGVGEAAQIYS 180 Query: 185 EFGHFITQIEWISLGGGIHFTDK 207 E +++ + GGG+ Sbjct: 181 ELVRLGARMKVVDFGGGLGIDYN 203 >gi|262201693|ref|YP_003272901.1| alanine racemase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262085040|gb|ACY21008.1| alanine racemase domain protein [Gordonia bronchialis DSM 43247] Length = 360 Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 24/209 (11%), Positives = 51/209 (24%), Gaps = 11/209 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLY 61 TP+ ++D ++L NL ++AGV + K + + G T +++ Sbjct: 6 GTPFLVVDDERLEANLARVADRARDAGVLVRPHAKTHKCVEIARRQIAHGAAGLTVATVG 65 Query: 62 EVML------GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + E F A I + ++ D + Sbjct: 66 EAEVFAAVDEVREIFIAYPLWVTPAMAGRLISIARIVSLRVGIDSAEGARHLADSLHEAG 125 Query: 116 KKIG-LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE---NKS 171 L + + + R + D + ++ Sbjct: 126 DGGAPLEVVVEIDSGQHRTGTSPRVAGEVARAAVDAGLDVVGVFTFPGHSYGPGDTRARA 185 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGG 200 L + + S G Sbjct: 186 ADQEITALAEAAQGLRANGIEPRVRSGGS 214 >gi|145299665|ref|YP_001142506.1| arginine decarboxylase [Aeromonas salmonicida subsp. salmonicida A449] gi|166200064|sp|A4SPD6|SPEA_AERS4 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|142852437|gb|ABO90758.1| biosynthetic arginine decarboxylase [Aeromonas salmonicida subsp. salmonicida A449] Length = 633 Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 35/266 (13%), Positives = 74/266 (27%), Gaps = 33/266 (12%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD-- 53 TP L L + +D A + +K + +T++Q Sbjct: 60 TPVLLRFPDILKSRVDALFNAFGQAIEKSGYEGDYLCVYPIKVNQQSRVIETISQSYSDK 119 Query: 54 ---GTTSSSLYEVMLGHEKFG--GETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQ 103 G + S E++ G N I + + I+ S+ Sbjct: 120 PRLGLEAGSKPELLAVLSHHHEQGSVIVCNGYKDREYIRHALLGNLMGHKVYIVVEKPSE 179 Query: 104 LNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIE--------SE 154 L D++ +L+ K + + S + S+ G + + Sbjct: 180 LEMVLDESARLNIKPNIGVRAKLASTGSGMWESSGGSMSKFGLSASQILALVERLRSLDK 239 Query: 155 IKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211 + + L FH + + E I+ + +GGG+ + Sbjct: 240 LDCLQLLHFHLGSQIANIRDIQGGIRECGRFYSELRRLGVPIDVVDVGGGLGVDYEGTRS 299 Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAI 237 + C +Y+ + G+ Sbjct: 300 QSHCSA-NYSLSEYANNVVWGIGDVC 324 >gi|254705776|ref|ZP_05167604.1| metal-activated pyridoxal protein [Brucella pinnipedialis M163/99/10] gi|261313198|ref|ZP_05952395.1| alanine racemase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261302224|gb|EEY05721.1| alanine racemase domain-containing protein [Brucella pinnipedialis M163/99/10] Length = 355 Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 90/324 (27%), Gaps = 15/324 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP L+D +++ N++ A AGVKL +K + G T L Sbjct: 11 VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + YN+ ++ + I TV AQ + Sbjct: 71 GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKR 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + P I + + + L Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAH---IIEKSAGLCFVGLMTYPATGRGDEAERWL 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + E IS GG P + + + Y + + G A + Sbjct: 188 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + + +S I+D+ +A D L + + A V G S Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301 Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322 G + G+ + IGDR+ D Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322 >gi|90578385|ref|ZP_01234196.1| arginine decarboxylase [Vibrio angustum S14] gi|90441471|gb|EAS66651.1| arginine decarboxylase [Vibrio angustum S14] Length = 639 Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 81/303 (26%), Gaps = 51/303 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-------N 49 P + + + + +D+ A + +K + + Sbjct: 61 PVLVRFPEVMHHRVDSLCSAFNQAIENYGYTGDYLAVYPIKVNQQQEVVSEILKSQYAKQ 120 Query: 50 QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 Q G + S E+M L + N I L + I+ +S Sbjct: 121 QRQLGLEAGSKPELMAVLAMAQEASSVIVCNGYKDKEYIRLALIGEKLGHEVYIVLEKLS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ES 153 +L ++A++L L + S K S+ G + + Sbjct: 181 ELRIILEQAKELGVTPRLGLRARLASQGKGKWQASGGEKSKFGLSASQVLTVVDELRQRN 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + + L FH + + + E I + +GGG+ + Sbjct: 241 MLDCLQLLHFHLGSQIANIRDVRNGVGEAGRVYAELKKIGVGITTVDVGGGLAVDYEGTR 300 Query: 211 VKDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 ++ C + + +I E G + + L T V+ I Sbjct: 301 CQNSCSMNYSINEYANNIVYVLGDICTEYDIAMPRIISESGRNLTAHHAVLITDVVGIES 360 Query: 254 NIK 256 Sbjct: 361 YKP 363 >gi|161620802|ref|YP_001594688.1| alanine racemase [Brucella canis ATCC 23365] gi|161337613|gb|ABX63917.1| Alanine racemase [Brucella canis ATCC 23365] Length = 355 Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 89/324 (27%), Gaps = 15/324 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP L+D +++ N++ A AGVKL +K + G T L Sbjct: 11 VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + YN+ ++ + I TV AQ + Sbjct: 71 GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKR 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + P I + + L Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAH---IIEKSAGLCFGGLMTYPATGRGDEAERWL 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + E IS GG P + + + Y + + G A + Sbjct: 188 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + + +S I+D+ +A D L + + A V G S Sbjct: 246 DCALTVLATV-VSHPTPKRAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301 Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322 G + G+ + IGDR+ D Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322 >gi|154251070|ref|YP_001411894.1| alanine racemase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154155020|gb|ABS62237.1| alanine racemase domain protein [Parvibaculum lavamentivorans DS-1] Length = 381 Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 22/80 (27%), Gaps = 2/80 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 I TP ++D N+ K + + + K + + G + L Sbjct: 22 IPTPALVLDLDAFERNVARMAEHCKVSNLSIRPHAKTHKCVTIAKAQIAAGAVGQCCAKL 81 Query: 61 YEVMLGHEKFGGETHAYNVA 80 E G E+ Sbjct: 82 GEAE-AMAAGGIESILITSP 100 >gi|256848377|ref|ZP_05553820.1| alanine racemase [Lactobacillus coleohominis 101-4-CHN] gi|256714975|gb|EEU29953.1| alanine racemase [Lactobacillus coleohominis 101-4-CHN] Length = 378 Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 23/208 (11%), Positives = 58/208 (27%), Gaps = 8/208 (3%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKC----FAAWGMFDTLNQYM-DGTTSSSLYE 62 ++D L +N+ AG + +K + L++ G + L E Sbjct: 12 VVDLGALRHNIRAQKAALP-AGSHIFGVVKADAYGNGMTQVAHVLSEEGVAGFCVALLDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 ET N ++ +V L +++ AQ H + L++ Sbjct: 71 GFTLRNAGLQETILVLGITPVQYAPLAAENGISLTVGSVDWLKEYQQVAQTNHVRQPLKV 130 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + + + E E + + ++ F L Sbjct: 131 HLGLDTGMGRIGFQDVTEFKQALQLVQTPEFEFEGI--FTHFATVDSADKTYFEHQLTKW 188 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYP 210 ++ + ++ + Sbjct: 189 KQFLAVVDHRPRYVHMANSATGLWHQQD 216 >gi|3421147|gb|AAC68515.1| arginine decarboxylase [Barbarea vulgaris] Length = 407 Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 62/204 (30%), Gaps = 27/204 (13%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +K + + + ++ G + S E++L + +K Sbjct: 1 YQGVYPVKGNQDRFVVEDIVRFGSPFRFGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTTQIVRVVSKLSQSGMLDRLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDK 207 E ++ I +GGG+ Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYD 203 >gi|254699959|ref|ZP_05161787.1| metal-activated pyridoxal protein [Brucella suis bv. 5 str. 513] gi|261750439|ref|ZP_05994148.1| alanine racemase domain-containing protein [Brucella suis bv. 5 str. 513] gi|261740192|gb|EEY28118.1| alanine racemase domain-containing protein [Brucella suis bv. 5 str. 513] Length = 355 Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 89/324 (27%), Gaps = 15/324 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP L+D +++ N++ A AGVKL +K + G T L Sbjct: 11 VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + YN+ ++ + I TV AQ + Sbjct: 71 GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKR 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + P I + + L Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAH---IIEKSAGLCFGGLMTYPATGRGDEAERWL 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + E IS GG P + + + Y + + G A + Sbjct: 188 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + + +S I+D+ +A D L + + A V G S Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301 Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322 G + G+ + IGDR+ D Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322 >gi|23500480|ref|NP_699920.1| amino acid processing-like protein [Brucella suis 1330] gi|148557939|ref|YP_001257694.1| amino acid processing-like protein [Brucella ovis ATCC 25840] gi|163844874|ref|YP_001622529.1| hypothetical protein BSUIS_B0735 [Brucella suis ATCC 23445] gi|254703081|ref|ZP_05164909.1| metal-activated pyridoxal protein [Brucella suis bv. 3 str. 686] gi|254711007|ref|ZP_05172818.1| metal-activated pyridoxal protein [Brucella pinnipedialis B2/94] gi|256015507|ref|YP_003105516.1| amino acid processing enzyme-related protein [Brucella microti CCM 4915] gi|256029389|ref|ZP_05443003.1| metal-activated pyridoxal protein [Brucella pinnipedialis M292/94/1] gi|256043620|ref|ZP_05446547.1| metal-activated pyridoxal protein [Brucella melitensis bv. 1 str. Rev.1] gi|256059078|ref|ZP_05449287.1| metal-activated pyridoxal protein [Brucella neotomae 5K33] gi|256111342|ref|ZP_05452368.1| metal-activated pyridoxal protein [Brucella melitensis bv. 3 str. Ether] gi|256157582|ref|ZP_05455500.1| metal-activated pyridoxal protein [Brucella ceti M490/95/1] gi|256253443|ref|ZP_05458979.1| metal-activated pyridoxal protein [Brucella ceti B1/94] gi|260167522|ref|ZP_05754333.1| metal-activated pyridoxal protein [Brucella sp. F5/99] gi|260564811|ref|ZP_05835296.1| alanine racemase domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|260567990|ref|ZP_05838459.1| alanine racemase domain-containing protein [Brucella suis bv. 4 str. 40] gi|261220568|ref|ZP_05934849.1| alanine racemase domain-containing protein [Brucella ceti B1/94] gi|261318591|ref|ZP_05957788.1| alanine racemase domain-containing protein [Brucella pinnipedialis B2/94] gi|261323024|ref|ZP_05962221.1| alanine racemase domain-containing protein [Brucella neotomae 5K33] gi|261753697|ref|ZP_05997406.1| alanine racemase domain-containing protein [Brucella suis bv. 3 str. 686] gi|261756939|ref|ZP_06000648.1| alanine racemase domain-containing protein [Brucella sp. F5/99] gi|265986391|ref|ZP_06098948.1| alanine racemase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|265990040|ref|ZP_06102597.1| alanine racemase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265992849|ref|ZP_06105406.1| alanine racemase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|265996085|ref|ZP_06108642.1| alanine racemase domain-containing protein [Brucella ceti M490/95/1] gi|294853480|ref|ZP_06794152.1| metal-activated pyridoxal protein [Brucella sp. NVSL 07-0026] gi|23464109|gb|AAN33925.1| amino acid processing enzyme-related protein [Brucella suis 1330] gi|148369224|gb|ABQ62096.1| amino acid processing enzyme-related protein [Brucella ovis ATCC 25840] gi|163675597|gb|ABY39707.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|255998167|gb|ACU49854.1| amino acid processing enzyme-related protein [Brucella microti CCM 4915] gi|260152454|gb|EEW87547.1| alanine racemase domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|260154655|gb|EEW89736.1| alanine racemase domain-containing protein [Brucella suis bv. 4 str. 40] gi|260919152|gb|EEX85805.1| alanine racemase domain-containing protein [Brucella ceti B1/94] gi|261297814|gb|EEY01311.1| alanine racemase domain-containing protein [Brucella pinnipedialis B2/94] gi|261299004|gb|EEY02501.1| alanine racemase domain-containing protein [Brucella neotomae 5K33] gi|261736923|gb|EEY24919.1| alanine racemase domain-containing protein [Brucella sp. F5/99] gi|261743450|gb|EEY31376.1| alanine racemase domain-containing protein [Brucella suis bv. 3 str. 686] gi|262550382|gb|EEZ06543.1| alanine racemase domain-containing protein [Brucella ceti M490/95/1] gi|262763719|gb|EEZ09751.1| alanine racemase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263000709|gb|EEZ13399.1| alanine racemase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|264658588|gb|EEZ28849.1| alanine racemase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|294819135|gb|EFG36135.1| metal-activated pyridoxal protein [Brucella sp. NVSL 07-0026] Length = 355 Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 89/324 (27%), Gaps = 15/324 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP L+D +++ N++ A AGVKL +K + G T L Sbjct: 11 VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + YN+ ++ + I TV AQ + Sbjct: 71 GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKR 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + P I + + L Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAH---IIEKSAGLCFGGLMTYPATGRGDEAERWL 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + E IS GG P + + + Y + + G A + Sbjct: 188 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + + +S I+D+ +A D L + + A V G S Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301 Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322 G + G+ + IGDR+ D Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322 >gi|17988891|ref|NP_541524.1| metal-activated pyridoxal protein [Brucella melitensis bv. 1 str. 16M] gi|225629220|ref|ZP_03787253.1| metal-activated pyridoxal protein [Brucella ceti str. Cudo] gi|17984718|gb|AAL53788.1| metal-activated pyridoxal enzyme [Brucella melitensis bv. 1 str. 16M] gi|225615716|gb|EEH12765.1| metal-activated pyridoxal protein [Brucella ceti str. Cudo] Length = 360 Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 89/324 (27%), Gaps = 15/324 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP L+D +++ N++ A AGVKL +K + G T L Sbjct: 16 VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 75 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + YN+ ++ + I TV AQ + Sbjct: 76 GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKR 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + P I + + L Sbjct: 136 PLKVLVECDTGMGRCGVQTPGQARELAH---IIEKSAGLCFGGLMTYPATGRGDEAERWL 192 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + E IS GG P + + + Y + + G A + Sbjct: 193 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 250 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + + +S I+D+ +A D L + + A V G S Sbjct: 251 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 306 Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322 G + G+ + IGDR+ D Sbjct: 307 GKVTGDV---ANLNIGDRVRVIPD 327 >gi|3421178|gb|AAC68524.1| arginine decarboxylase [Nasturtium officinale] Length = 407 Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 62/204 (30%), Gaps = 27/204 (13%) Query: 30 VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82 + + +K + + + ++ G + S E++L + +K Sbjct: 1 YQGVYPVKGNQDRFVVEDIVRFGSPFRFGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFK 60 Query: 83 DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134 D E ++ I+ +L+ D +QK++ + GLR +S + Sbjct: 61 DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120 Query: 135 DPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNNCENKS---FLCFSAMLKNIE 183 + G + + + L FH + S A + Sbjct: 121 TSGEKG-KFGLTTTQIVRVVSKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179 Query: 184 KEFGHFITQIEWISLGGGIHFTDK 207 E ++ I +GGG+ Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYD 203 >gi|149920522|ref|ZP_01908990.1| arginine decarboxylase [Plesiocystis pacifica SIR-1] gi|149818703|gb|EDM78148.1| arginine decarboxylase [Plesiocystis pacifica SIR-1] Length = 676 Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 24/204 (11%), Positives = 60/204 (29%), Gaps = 29/204 (14%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTL----N 49 + +P+ L ++ ++ + A + LK + +T+ Sbjct: 96 VHSPFVLRFPGMIVAAMERLHRAFELAAEENEYQGEHMGMYPLKVNQRRSVVETVVAARE 155 Query: 50 QYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQ 103 + G + S E++L + + YKD A L + ++ ++ + Sbjct: 156 RCAYGLEAGSKPELLLAMAQPVSKAPLICNGYKDREFIRLAFHAAELGHEVILVLESMRE 215 Query: 104 LNKFKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIE-------- 152 + ++ D + K + S S+ G + +E Sbjct: 216 VQRYLDIYAQGEWKATPFLGMRAKLYSRGSGRWQSSGGERSKFGLTTNEMLEVVRRLEGA 275 Query: 153 SEIKNVNGLMFHNNCENKSFLCFS 176 + ++ L FH + Sbjct: 276 DALDRLSLLHFHIGSQITQIKRIK 299 >gi|163797415|ref|ZP_02191367.1| alanine racemase-like protein [alpha proteobacterium BAL199] gi|159177334|gb|EDP61891.1| alanine racemase-like protein [alpha proteobacterium BAL199] Length = 378 Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 9/174 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 I TP +ID NLD + G+++ K + + +++ G + Sbjct: 16 IDTPALVIDLDAFERNLDRMAKFAHDTGIRVRPHAKTHKSPAVARAQMHRGAVGQCCQKV 75 Query: 61 YEVM-LGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E L + + + Q+ + + A++ Sbjct: 76 GEAEVLVQAGIENVLVSNQVVGASKLARLAALARRAWIGVCADDAEQVRAYGEAARRAQV 135 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 + + + V + P + E K ++ + GL ++ Sbjct: 136 DLHVLVEIDVGAA----RCGVLPGAPAVELAKMIADTPGLSFEGLQAYHGSAQH 185 >gi|254720286|ref|ZP_05182097.1| metal-activated pyridoxal protein [Brucella sp. 83/13] gi|265985304|ref|ZP_06098039.1| alanine racemase domain-containing protein [Brucella sp. 83/13] gi|306839821|ref|ZP_07472620.1| metal-activated pyridoxal protein [Brucella sp. NF 2653] gi|264663896|gb|EEZ34157.1| alanine racemase domain-containing protein [Brucella sp. 83/13] gi|306405097|gb|EFM61377.1| metal-activated pyridoxal protein [Brucella sp. NF 2653] Length = 355 Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 91/324 (28%), Gaps = 15/324 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP L+D +++ N++ A AGVKL +K + + G T L Sbjct: 11 VDTPAILVDVDRVVANIEKAQARADAAGVKLRPHIKTHKSPFFARMQVKAGAVGITCQKL 70 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + YN+ ++ + I TV AQ+ + Sbjct: 71 GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQRFMNEKR 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + P I + + L Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAR---IIEKSAGLCFGGLMTYPATGRGDEAERWL 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + E IS GG P + + + Y + + G A + Sbjct: 188 RAARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + + +S I+D+ +A D L + + A V G S Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301 Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322 G + G+ + IGDR+ D Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322 >gi|167626353|ref|YP_001676853.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|226711043|sp|B0TYB0|ALR_FRAP2 RecName: Full=Alanine racemase gi|167596354|gb|ABZ86352.1| Alanine racemase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 365 Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 62/190 (32%), Gaps = 12/190 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYMDGTTSSSLYEVM 64 I KQ L NN+ K+ +K A + + + +D ++ E Sbjct: 6 ISKQTLTNNIKIIREYVG--NAKICFPVKANAYGHGIEEIVENTHDLVDFFAVANSLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + V Y + V N + + K + A++L+KKI + IN Sbjct: 64 RVTAITKKPVLVFGVIYYEYLERMVSEN-IRVSIQDYDDIEKLEQIAKELNKKIYVHINV 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + ++ + + K S+ + G+ H C + +A K Sbjct: 123 NTGMNRMGVCYNDVC-----RTIKRAYNSKWIILEGVYSHLACADNRDHPTNAKQKKRFS 177 Query: 185 EFGHFITQIE 194 E + ++ Sbjct: 178 EIVEYAKELS 187 >gi|284172920|ref|YP_003406301.1| alanine racemase [Haloterrigena turkmenica DSM 5511] gi|284017680|gb|ADB63628.1| alanine racemase domain protein [Haloterrigena turkmenica DSM 5511] Length = 371 Score = 45.5 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 26/219 (11%), Positives = 65/219 (29%), Gaps = 15/219 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY--MDGTTSSS 59 ++TP L+D + N++ + V L +K + ++ G + Sbjct: 12 LETPALLVDIDAMERNIEEYAAVADENDVTLRSHIKTHKNAELAALEDEMTDGGGICCQT 71 Query: 60 LYEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDT----IIFNTVSQLNKFKDKAQKL 114 L EV + +Y V + + ++ + ++ +D AQ Sbjct: 72 LGEVETMARNGIDDIYLSYQVVGERKLDRFCWLSQKVEKLATTVDSAATIDLLQDAAQAH 131 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + V + P L E+ + + H E ++ Sbjct: 132 EITADVILEVDVGLHRT-GVAPGPEAVALAERIDEAANLSFDGILAYESHVKAEAETESE 190 Query: 175 FSAML-------KNIEKEFGHFITQIEWISLGGGIHFTD 206 F + +++ + ++ + +GG Sbjct: 191 FDELCWEAMELGEDVVDDIEAAGIPVDEVKVGGTATSRY 229 >gi|83772085|dbj|BAE62215.1| unnamed protein product [Aspergillus oryzae] Length = 128 Score = 45.5 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 17/49 (34%), Gaps = 7/49 (14%) Query: 290 AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337 + G +C D + K+ D + ++++ FNG Sbjct: 1 MPIWGPTCDGCDYVVRGATLRCEAKVRDWLVYKNMGA------TRFNGF 43 >gi|300310473|ref|YP_003774565.1| amino acid aldolase or racemase [Herbaspirillum seropedicae SmR1] gi|300073258|gb|ADJ62657.1| amino acid aldolase or racemase protein [Herbaspirillum seropedicae SmR1] Length = 376 Score = 45.5 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 54/214 (25%), Gaps = 20/214 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ N+ GV+ +K + L G T S+L Sbjct: 6 LPTPAALIDVARMQRNITRMQQRMDALGVRFRPHVKTTKCNEVVQAQLQAGASGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V ++ I+ ++V A Sbjct: 66 KEAEQFFAA-GISDIVYAVGMAPTKLGQALALRRQGCNLKIVADSVVCAEAI--VAFGQA 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE------- 168 ++ + + P + + + + G++ H Sbjct: 123 QEECFDVWIEIDVDGHR--SGIAPEDATLLAVGNVLHAGGMRIGGVIAHAGSSYDYDNDE 180 Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200 A + + +S+G Sbjct: 181 ALIAVAEQERAGCVRAAERLREAGLPCDVVSIGS 214 >gi|260829763|ref|XP_002609831.1| hypothetical protein BRAFLDRAFT_78677 [Branchiostoma floridae] gi|229295193|gb|EEN65841.1| hypothetical protein BRAFLDRAFT_78677 [Branchiostoma floridae] Length = 336 Score = 45.5 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 33/282 (11%), Positives = 76/282 (26%), Gaps = 30/282 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59 I TP L+D KL NL T + +++ + +KL K + + G Sbjct: 17 IDTPALLVDLDKLEENLKTMPITLKEYSNLKLRPHAKSHKCPTLARLQVTHGAVGVCVQK 76 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 L E + N +I+ ++ + D AQ++ IG Sbjct: 77 LTEAQAMVHGGVEDVLVTNE-----------HATISIVVDSQQNIRDLSDAAQQMGVDIG 125 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK--------- 170 + ++ +V P + + + GL + Sbjct: 126 VLVDVNVGMP----RCGVLPGPEVVQLASLINSLPNVTLKGLHCYQGANQHIRKAEERAE 181 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEKYS 226 + K ++++ GG + + + + ++ Sbjct: 182 ATAAAVEKAATALKALEDAEISCDYVTGGGTGTYMYEAKSGVFTEVQPGSYVFMDADYGR 241 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH 268 + + TV + + ++ + H Sbjct: 242 NFGEDGQPVHQFHQSLFVLATVQSVPVYPNSDIVYHCGGDEH 283 >gi|91790640|ref|YP_551592.1| alanine racemase-like protein [Polaromonas sp. JS666] gi|91699865|gb|ABE46694.1| alanine racemase-like protein [Polaromonas sp. JS666] Length = 380 Score = 45.5 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 11/171 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 ++TP L+D ++ N++ GV +K + L G T S+L Sbjct: 9 LETPALLLDTARMDRNIERMRGRMTRHGVHFRPHVKTNKCMDVTQRLLDAGARGITVSTL 68 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLNKFKDKAQKLH 115 E + G Y V ++ L T+I ++V + + + Sbjct: 69 REAEY-FSERGITDILYAVCLSPNKLAHALRLRRQGIRLTVIVDSVEMALQLNPERIQGD 127 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166 ++ + I +P S ++S+ V G+M H Sbjct: 128 DRLDVLIEIDCDGH----RSGVQPDSPALLAIAQALQSQGLAVGGVMTHAG 174 >gi|256784445|ref|ZP_05522876.1| lysine/ornithine decarboxylase [Streptomyces lividans TK24] Length = 158 Score = 45.5 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 14/129 (10%) Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVP--DYLLYQE 277 + +EPG +V + + V+ ++E ++ + + + D L Y+ Sbjct: 16 HLDFVVEPGRHLVADHGAIRAHVVRLTERRAADGERQHWLYLSCGKFNGLYEMDALQYRL 75 Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP----VKIGDRISFEDVAGYNINRKNW 333 +P+ A+V G +C + D + P + GD + Y + Sbjct: 76 VFPGHPDGPCVPAVVAGPTCDSDDAYSHEEGLVPVPAALASGDPVWVLSCGAYATSYTTR 135 Query: 334 -FNGI-NMP 340 FNG +P Sbjct: 136 GFNGFAPLP 144 >gi|239834177|ref|ZP_04682505.1| alanine racemase domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239822240|gb|EEQ93809.1| alanine racemase domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 354 Score = 45.5 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 50/329 (15%), Positives = 91/329 (27%), Gaps = 25/329 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60 + TP LID ++ N+ GVKL +K + G T L Sbjct: 10 VDTPAILIDIDRVKANIARVQAHADAIGVKLRPHIKTHKLPFFAKMQVEAGAAGITCQKL 69 Query: 61 YEVM-LGHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E + YN D ++ + + L + Sbjct: 70 GEAEVMADAGLTDIFLPYNILGREKLDRLHALHQRVTLSVTVDNSTSLAGLAARFADEKH 129 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNVNGLMFHNNCENKSFLC 174 + + + R + + + I + + Sbjct: 130 PLKVLVECDTG--------MGRCGVQTPAEALELARIIDQSAGLGFGGLMTYPAAGKPDQ 181 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 L + + E IS GG P + + Y + +E G Sbjct: 182 AEQWLYSARELLDANGLSCETISSGGT--PDMWRKPSDSVVTEYRPGTYIYFDRYQVEKG 239 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294 A V + + + +S I+D+ +A D L + + G A V G Sbjct: 240 AATVDDCAFTVLSTI-VSHPTAERAIIDAGSKALSSDTLGLSDFGEVR---GRSDARVVG 295 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRI-SFED 322 S G + G+ +K+G+R+ D Sbjct: 296 LSEEHGKLTGDV---ADLKVGERVRIIPD 321 >gi|257460796|ref|ZP_05625897.1| GlnD family protein [Campylobacter gracilis RM3268] gi|257442127|gb|EEV17269.1| GlnD family protein [Campylobacter gracilis RM3268] Length = 368 Score = 45.5 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 41/329 (12%), Positives = 93/329 (28%), Gaps = 12/329 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60 I TP LID++ +L NL AGV L K G T + Sbjct: 6 IDTPALLIDREIVLRNLQKMQSYADAAGVSLRPHTKTHKMPYFAKLQKSLGAAGITVAKT 65 Query: 61 YEVML-----GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + + F + ++ + +++ Q + ++ Sbjct: 66 GEAEIMAANGLKDIFIANEIVGELKFRRIIALLRAGINLSFGTDSIEQAGLIERAFERSG 125 Query: 116 KKIGLRINPSVSYS--KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN--NCENKS 171 K + V + F+ F + + CK+ + + +G + E + Sbjct: 126 TKACVLAEIEVGENRSGFVEKQDFAAFIKFIKGCKNIEFRGVFSHDGHSYKAADKSECER 185 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231 + + + + G D+ + ++ + + Sbjct: 186 IHLAAQRRTLEFADIARELALPARVVSIGSTPSLINDFEILKGITEIRPGTYIFMDASQA 245 Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291 + N ++ TTV+ + + V + + + + G Sbjct: 246 QAYGDYSMNAASILTTVISRPTADRIITDVGAKGLTQQRRTEGFTATPGLGRIKGTE-VW 304 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + G I + V++GDR+ Sbjct: 305 ING-VYDEHAIIYDRALRDAVRVGDRLEI 332 >gi|51891691|ref|YP_074382.1| putative alanine racemase [Symbiobacterium thermophilum IAM 14863] gi|51855380|dbj|BAD39538.1| putative alanine racemase [Symbiobacterium thermophilum IAM 14863] Length = 383 Score = 45.5 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 17/47 (36%), Gaps = 1/47 (2%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYM 52 Y++D + NN T + G++L K + + + Sbjct: 31 YVLDLDAIRNNARTLAEAARREGIQLYFMSKQLNRNPQVIAAVAEAG 77 >gi|310815136|ref|YP_003963100.1| alanine racemase domain protein [Ketogulonicigenium vulgare Y25] gi|308753871|gb|ADO41800.1| alanine racemase domain protein [Ketogulonicigenium vulgare Y25] Length = 373 Score = 45.5 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 22/184 (11%), Positives = 46/184 (25%), Gaps = 4/184 (2%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCF--AAWGMFDTLNQYMD-GTTS 57 M+ TP +ID N+ GV L K A + + Q G Sbjct: 21 MVDTPALVIDLDVFDANIARMKAYAAQMGVALRPHAKTHKSADIALLQ-MQQGGAVGVCC 79 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 + E + + + N ++ A+ + I + + Sbjct: 80 QKVSEAVALADAGVTDILIANEVVGPAKVAALAALAGRIKLAVCADHPVQVAAYSAAAVQ 139 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 G+ ++ V +P + + + GL + + Sbjct: 140 AGVTLDVLVEIDCGSHRCGVQPGQPAVDLALAIDAAPNLHFAGLQSYFGRAQHIYDAAER 199 Query: 178 MLKN 181 Sbjct: 200 RAAL 203 >gi|260429750|ref|ZP_05783726.1| metal-activated pyridoxal enzyme [Citreicella sp. SE45] gi|260419233|gb|EEX12487.1| metal-activated pyridoxal enzyme [Citreicella sp. SE45] Length = 387 Score = 45.5 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 63/211 (29%), Gaps = 12/211 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59 I+TP ++D L N+ K G++ + K + + + G Sbjct: 27 IQTPCLVLDLDALERNIKVMGDYAKAHGMRHRVHGKMHKSVDVAKLQEKLGGAVGVCCQK 86 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLS-----NCDTIIFNTVSQLNKFKDKAQKL 114 + E + + N +ID + + + V + + + A + Sbjct: 87 VSEAEVFARGGIKDVLVSNQVRDPQKIDRLAQLPKLGGRIIVCVDDVENVAELSEAAVRH 146 Query: 115 HKKIGLRINPSVSY--SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN--- 169 ++ + I ++ E + + I+ G M H + Sbjct: 147 GTELDIFIEIDCGAGRCGVSSTPAVVEIAKAVEAAPNLNFAGIQAYQGAMQHIDSYEARK 206 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200 + AM+++ E +S GG Sbjct: 207 EKLDTAIAMVEDAVAGLKAEGIDCELVSGGG 237 >gi|255659976|ref|ZP_05405385.1| alanine racemase [Mitsuokella multacida DSM 20544] gi|260847728|gb|EEX67735.1| alanine racemase [Mitsuokella multacida DSM 20544] Length = 369 Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 91/327 (27%), Gaps = 26/327 (7%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMD-GTTSSSLYEV 63 ID L +N + + G KL +K A A + + ++L E Sbjct: 10 IDLAALRHNYEEIKKNIRG-GAKLCAVVKADAYGHGALAVARVAVEAGASYLAVATLGEA 68 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E E ++ T + + +A + HK + + Sbjct: 69 IELREAGFTVPILLLGLVLPDEARDIVDYDVTQVVCELPLAEAISREAVRQHKTAKVHLK 128 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL-MFHNNCENKSFLCFSAMLKNI 182 + + +G + + G+ ++K L Sbjct: 129 VETGMGRIGIRP-----EEIGALAAAVKQLPNIEIEGMFSHFAMADSKDKTYTKGQLAKF 183 Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFSEKYSVQIYLEPG 234 E+ +++ + + D Q S++ + I L+P Sbjct: 184 EQALRAVEEAGVKLKIRHIAESAAILEIPEAHYDMVRAGVIQYGMWPSDEVTHPIDLKPV 243 Query: 235 EAIVTNTTTLNT-TVLDISENIKNLVIVDSSVEAHVP----DYLLYQESATIYPNTGPYT 289 + + T + + + S A +P D + Y + G Sbjct: 244 MKVCAKVVFMKTLHPGESIGYGRQFIAERESRIATLPIGYADGYIRAYGNGGYVSFGGRK 303 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGD 316 A + GR C+ + + VK GD Sbjct: 304 APIAGRVCMDQ-VMVDVTDLPDVKEGD 329 >gi|91790642|ref|YP_551594.1| D-3-hydroxyaspartate aldolase [Polaromonas sp. JS666] gi|91699867|gb|ABE46696.1| D-3-hydroxyaspartate aldolase [Polaromonas sp. JS666] Length = 371 Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 26/94 (27%), Gaps = 1/94 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP ++D NL K + V+L K + + G + Sbjct: 16 VDTPALVLDLDAFERNLHRMADALKGSQVRLRPHAKSHKCPEIALRQIALGAVGVCCQKV 75 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD 94 E + + N +I ++ Sbjct: 76 SEAAVFVAAGVRDVLITNEVVGPVKIRHLMELAR 109 >gi|330447659|ref|ZP_08311307.1| arginine decarboxylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491850|dbj|GAA05804.1| arginine decarboxylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 639 Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 80/303 (26%), Gaps = 51/303 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-------N 49 P + + + + +D+ + A + +K + + Sbjct: 61 PVLVRFPEVMHHRVDSLCSVFNQAIENYGYQGDYLAVYPIKVNQQEEVVSEILKSQYAKQ 120 Query: 50 QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 Q G + S E+M L + N I L + I+ +S Sbjct: 121 QRQLGLEAGSKPELMAVLAMAQEASSVIVCNGYKDKEYIRLALIGEKLGHEVYIVLEKLS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK----- 156 +L ++AQ+L L + S K S+ G + + Sbjct: 181 ELKIILEQAQELGVTPRLGLRARLASQGKGKWQASGGEKSKFGLSASQVLTVVDELRQRN 240 Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 + L FH + + + E I + +GGG+ + Sbjct: 241 MLGCLQLLHFHLGSQIANIRDVRSGVGEAGRVYAELKKLGAGITTVDVGGGLAVDYEGTR 300 Query: 211 VKDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 + C + E +I E G + + L T V+ I Sbjct: 301 CQSSCSMNYSINEYANNIVYVLGDICTEYEMPMPRIISESGRNLTAHHAVLITDVVGIES 360 Query: 254 NIK 256 Sbjct: 361 YKP 363 >gi|307265382|ref|ZP_07546939.1| alanine racemase domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306919666|gb|EFN49883.1| alanine racemase domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 373 Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 51/162 (31%), Gaps = 7/162 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP +L+D KL +N+ + G +L +K + + Y G ++ Sbjct: 7 LPTPSFLVDLDKLESNIKEMADTCRKNGKELWPMVKTHKSTAIAKMQQNYGSKGFLVGTI 66 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E E F AY VA K+ + F+ V K ++ ++ Sbjct: 67 DEAEKLTENGFKEIMIAYPVASKENIERILTLAQKAHVILSFDGVEAAAKVEETCNRIGL 126 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV 158 + I L EK K + K + Sbjct: 127 SMDYLIIIDSGL--HRFGVVPEKVLELAEKLKSFTHLKFKGI 166 >gi|301059307|ref|ZP_07200234.1| alanine racemase, N-terminal domain protein [delta proteobacterium NaphS2] gi|300446536|gb|EFK10374.1| alanine racemase, N-terminal domain protein [delta proteobacterium NaphS2] Length = 370 Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 61/208 (29%), Gaps = 10/208 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I TP+ L+D+ + +NL G + +K + + D + + + Sbjct: 12 IPTPFILVDEGIVKSNLRRIHDYAHRHGFSVRAHVKTHKSLALARMQMAMGDVSIAVAKA 71 Query: 62 EVMLGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTII--FNTVSQLNKFKDKAQKLHK 116 E G V E A L+ I ++ + +D A Sbjct: 72 EEAQVMVGLGHVDITVAYPAVGKARAEKIARLAGTHKIGVAVDSEYVMKGLEDAATAYGV 131 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS----F 172 +IG+ + + + LGE + + V + H E F Sbjct: 132 EIGISVMLDAGLHRC-GVSDPQALITLGEYARQSPSLRYEGVQMYVGHLYGEAADDPASF 190 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGG 200 + + + E +SLG Sbjct: 191 ERINRIWDPAYESLCSVGLTPERVSLGS 218 >gi|115456836|ref|NP_001052018.1| Os04g0107600 [Oryza sativa Japonica Group] gi|75296441|sp|Q7XRA1|ADC2_ORYSJ RecName: Full=Arginine decarboxylase 2; Short=ARGDC2; Short=OsADC2 gi|38345309|emb|CAE02767.2| OSJNBb0085F13.14 [Oryza sativa Japonica Group] gi|113563589|dbj|BAF13932.1| Os04g0107600 [Oryza sativa Japonica Group] gi|116310897|emb|CAH67837.1| B0616E02-H0507E05.13 [Oryza sativa Indica Group] gi|125546953|gb|EAY92775.1| hypothetical protein OsI_14579 [Oryza sativa Indica Group] gi|125589100|gb|EAZ29450.1| hypothetical protein OsJ_13525 [Oryza sativa Japonica Group] gi|215765040|dbj|BAG86737.1| unnamed protein product [Oryza sativa Japonica Group] gi|215768092|dbj|BAH00321.1| unnamed protein product [Oryza sativa Japonica Group] Length = 623 Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 25/267 (9%), Positives = 68/267 (25%), Gaps = 36/267 (13%) Query: 12 QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59 L N LD+ + + + +K + L + G + S Sbjct: 76 DVLKNRLDSLHAAFHGAVDSTGYASRYQGVFPIKVNQNKAVVQDLVTFGHGYSYGLEAGS 135 Query: 60 LYEVMLG---HEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDK 110 E+++ K + YKD + A + I+ +L+ ++ Sbjct: 136 KPELLIAMSCLAKAKPGAYLVCNGYKDADYVALALSARAMGLNAIIVLEMEEELDIVVEQ 195 Query: 111 AQKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGL 161 + +L + + + + + G ++ + L Sbjct: 196 SARLGVEPVIGVRAKLLTKIPGHFGSTAGKHGKFGMLADKIYEVAGKLKKMGKLHWLKLL 255 Query: 162 MFHNNCENKSFLCFSAMLKNIEKEFGHFITQ-----IEWISLGGGIHFTDKDYPVKDFCQ 216 +H + + + + + + GGG+ Sbjct: 256 HYHVGSMIPTTDIVYNAAAEAAGIYCALVKEHGATGMTTLDCGGGLGVDYDGTRSGSSDM 315 Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTT 243 + E+Y+ ++ + Sbjct: 316 SVAYGLEQYA-SSIVQAVRLTCDDNGV 341 >gi|152981283|ref|YP_001351715.1| low-specificity D-threonine aldolase [Janthinobacterium sp. Marseille] gi|151281360|gb|ABR89770.1| low-specificity D-threonine aldolase [Janthinobacterium sp. Marseille] Length = 379 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 47/176 (26%), Gaps = 10/176 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTS--S 58 + TP L+D +NL AG+K+ K + + L G Sbjct: 24 VDTPALLVDLDAFEDNLARVHTRVLQAGLKVRSHGKAHKSPAIAHRQLAAGATGICCQKV 83 Query: 59 SLYEVMLGHEKFGGETHAYNVA---YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E+ + I + Q+ + D A + Sbjct: 84 SEAEI-FVEAGITDVLITNQIVGLRKVTRVAALAARARLGICVDHPIQVEQIGDAASRQG 142 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171 + + I + + + +++ ++ L + S G+ Sbjct: 143 SHLDVLIEVDIGHQRCGISNAHQA-IDLARTIEQ--YSPHLRFAGIHAFRGSAQHM 195 >gi|330869029|gb|EGH03738.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 378 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 47/171 (27%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ N+ + GV+L +K + + G T S+L Sbjct: 8 LDTPVALLDVPRMQRNIQRMQHRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A D + + C I+ ++V A Sbjct: 68 KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQQH 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + ++ G+M H Sbjct: 126 DEHFDVWIEIDCDGHRSGLTV--DDPALVDVARTLVEGGMHLRGVMTHAGS 174 >gi|289646519|ref|ZP_06477862.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 378 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 47/171 (27%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ N+ + GV+L +K + + G T S+L Sbjct: 8 LDTPVALLDVPRMQRNIQRMQHRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A D + + C I+ ++V A Sbjct: 68 KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQQH 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + ++ G+M H Sbjct: 126 DEHFDVWIEIDCDGHRSGLTV--DDPALVDVARTLVEGGMHLRGVMTHAGS 174 >gi|312883710|ref|ZP_07743433.1| alanine racemase domain-containing protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309368627|gb|EFP96156.1| alanine racemase domain-containing protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 368 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 24/195 (12%), Positives = 51/195 (26%), Gaps = 16/195 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP L+D K+ N++T + G+ L K + + G + L Sbjct: 6 LDTPALLVDLDKMNQNIETMQQRINDLGLMLRPHTKAHKSPIIAQRQIDAGAKGICVAKL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTI-------IFNTVSQLNKFKDKAQK 113 E + E + + +I +++ + + + K A K Sbjct: 66 GEAEVMAEGGISDILITTPIAGEKKIQRLINLYLKYPDFRFIQVIDHHDHVAKIGQFALK 125 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173 + L I R +GE + I + + Sbjct: 126 AGVCVELMIEVESG--------QQRCGVDVGEPLLELIRAIKNTQGVSYAGIQAYSGHLQ 177 Query: 174 CFSAMLKNIEKEFGH 188 + + Sbjct: 178 HVKGYAERNHQARNA 192 >gi|332798070|ref|YP_004459569.1| alanine racemase domain-containing protein [Tepidanaerobacter sp. Re1] gi|332695805|gb|AEE90262.1| alanine racemase domain protein [Tepidanaerobacter sp. Re1] Length = 371 Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 54/210 (25%), Gaps = 13/210 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60 ++TP L+D L NN+ A + +L +K + + + G +L Sbjct: 6 LQTPAILVDLDILENNIKKAQALCDAHDKELWPMIKTHKSTEIVKMQQEAGAAGFLCGTL 65 Query: 61 YEVM-LGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E L +AY + I+ I + D A+ Sbjct: 66 DECEGLAKAGIKNIMYAYPVASPVNIQRVIELSKKCNFIIRIDNYDGAKMLNDAAEAAGV 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK------ 170 K+ I KD ++ H +K Sbjct: 126 KVNYTIIIDSGL--HRFGILPEKVLDFANSLKDFKALNFLGISTHPGHVYSASKQEDIPL 183 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGG 200 +K +++ I+ G Sbjct: 184 YVKDEKNAVKTAADSLRAAGYELKLITSGS 213 >gi|320323989|gb|EFW80073.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. glycinea str. B076] Length = 378 Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 48/171 (28%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ N+ + GV+L +K + + G T S+L Sbjct: 8 LDTPVALLDVPRMQRNIQRMQHRINELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A D + + C I+ ++V A Sbjct: 68 KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQRH 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + ++ G+M H Sbjct: 126 DENFDVWIEIDCDGHR--SGLTIDDPSLVEVARTLIEGGMHLRGVMTHAGS 174 >gi|71735273|ref|YP_275478.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555826|gb|AAZ35037.1| Alanine racemase, N-terminal domain family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 377 Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 48/171 (28%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ N+ + GV+L +K + + G T S+L Sbjct: 8 LDTPVALLDVPRMQRNIQRMQHRINELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A D + + C I+ ++V A Sbjct: 68 KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQRH 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + ++ G+M H Sbjct: 126 DENFDVWIEIDCDGHR--SGLTIDDPSLVEVARTLIEGGMHLRGVMTHAGS 174 >gi|221236140|ref|YP_002518577.1| alanine racemase [Caulobacter crescentus NA1000] gi|220965313|gb|ACL96669.1| alanine racemase [Caulobacter crescentus NA1000] Length = 402 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 44/132 (33%), Gaps = 5/132 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61 +TP ++D+ L NL + AGV+L K + + + G ++ Sbjct: 16 QTPLLVVDRAALERNLARMQALCDAAGVRLRAHGKTHKCSTLGRLIIERGAVGLCCQTVG 75 Query: 62 EVMLGHEKFGGETHAY--NVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKK 117 E + + + + A+ I + + Q+++ D A Sbjct: 76 EAEAYVAGGIQDVLVTAPSPPWGAARLAALAKTGARIGAVADDEGQIDRLSDAAVAAGVT 135 Query: 118 IGLRINPSVSYS 129 + L ++ + Sbjct: 136 LDLVVDLDLGTH 147 >gi|118497341|ref|YP_898391.1| alanine racemase [Francisella tularensis subsp. novicida U112] gi|195536029|ref|ZP_03079036.1| alanine racemase [Francisella tularensis subsp. novicida FTE] gi|226711045|sp|A0Q5X2|ALR_FRATN RecName: Full=Alanine racemase gi|118423247|gb|ABK89637.1| alanine racemase [Francisella novicida U112] gi|194372506|gb|EDX27217.1| alanine racemase [Francisella tularensis subsp. novicida FTE] Length = 365 Score = 44.7 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVM 64 I Q L NN+ + K+ +K A + + + +D +++ E Sbjct: 6 ISAQTLRNNIRIIKEYVGS--AKICFPVKANAYGHGLELIVEHSHDLVDFFAVANVLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + + ID +LS + + + K + A+ +KK + +N Sbjct: 64 RVLDVVEKPVMIFG-VIEYNYIDRILSKNIRVSIQDYNDIEKLEKFAKYYNKKPFVHVNL 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + ++ + + + ES+ + G+ H C + + K Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173 >gi|298487772|ref|ZP_07005813.1| alanine racemase, N-terminal domain family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157864|gb|EFH98943.1| alanine racemase, N-terminal domain family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 378 Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ N+ + GV+L +K + + G T S+L Sbjct: 8 LDTPVALLDVPRMQRNIQRMQHRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A D + + C I+ ++V A Sbjct: 68 KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQRH 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + S + ++ G+M H Sbjct: 126 DENFDVWIEIDCDGHRSGLTVDDPSLF--DVARTLIEGGMHLRGVMTHAGS 174 >gi|332977731|gb|EGK14494.1| amino acid aldolase or racemase family protein [Desmospora sp. 8437] Length = 396 Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 59/174 (33%), Gaps = 15/174 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD---GTTSS 58 + P+ +D L N+ + V++ A K + + + + + G Sbjct: 16 VPKPFAFLDLDLLRENIKNIRDRSRGKNVRI--ASKSIRSVPVLRLILESGEPFRGVMCY 73 Query: 59 SLYEVM-LGHEKFGGETHAYNVAYKDCEI----DAVLSNCDTIIFNTVSQLNKFKDKAQK 113 S E + L + F AY K+ T++ ++ +++ + ++ Sbjct: 74 SPLEALFLAEQGFDDLLVAYPAWEKEHLRAVAARVKAGKEITLMVDSPPHVDRLEQVGRE 133 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSR-----LGEKCKDKIESEIKNVNGLM 162 + + ++ VS S L E K +++ ++G+M Sbjct: 134 QEVCLPVCLDLDVSVSLPGLHFGVHRSPLSTRDSFLETAKKIRDAKHLRLDGIM 187 >gi|213583105|ref|ZP_03364931.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 206 Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 47/152 (30%), Gaps = 13/152 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54 P Q L + L + K A L+ +K + ++L G Sbjct: 51 PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 110 Query: 55 TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 + S E+M L H N YKD E + + + + K + A Sbjct: 111 LEAGSKAELMAVLAHAGMTRSVIVCN-GYKDREYIRLALIGEKMGHKVYLVIEKMSEIAI 169 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLG 144 L + L + P + + + + + G Sbjct: 170 VLEEAERLNVVPRLGVRARLASQGSGKWQSSG 201 >gi|150389494|ref|YP_001319543.1| alanine racemase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149949356|gb|ABR47884.1| alanine racemase domain protein [Alkaliphilus metalliredigens QYMF] Length = 367 Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 17/131 (12%), Positives = 37/131 (28%), Gaps = 5/131 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP ++D +L N++ + K+ GV L +K + + + G ++ L Sbjct: 6 LDTPCLVVDLDQLEKNIEEMGVLAKDHGVALWPMVKTHKSEYIVKKQLENGAEGVLAAKL 65 Query: 61 YEVMLGHEKFGGETH----AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E E + + +++ +KA Sbjct: 66 GEAEKMVEAGAKKVMMAYPIIGEGKLKRLVALTEKAEVFCSIDSLEVAEILNEKAITEGI 125 Query: 117 KIGLRINPSVS 127 I Sbjct: 126 VFQCIILIDSG 136 >gi|134804|sp|P22220|SPE1_AVESA RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC gi|16120|emb|CAA40137.1| arginine decarboxylase [Avena sativa] Length = 607 Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 26/257 (10%), Positives = 67/257 (26%), Gaps = 35/257 (13%) Query: 12 QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59 L + +++ N + + + +K + + + G + S Sbjct: 71 DVLRHRINSLHTAFANAIKYTQYGSVYQGVFPVKVNQHKDVVQDMVHFGYDHSYGLEAGS 130 Query: 60 LYEVMLGHEKFGGETHA---YNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDK 110 E+++ YKD A + I+ +L+ ++ Sbjct: 131 KPELLIAMSCLTKAKPGAYLVCNGYKDSAYVALALAARAMGLNVIIVLEMEEELDIVIEE 190 Query: 111 AQKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGL 161 + KL + + + + + G + +++ + L Sbjct: 191 SSKLGVEPVIGVRAKLLTKIPGHFGSTAGKHGKFGLPAEKIYEVAKKLKALNKLHWLKLL 250 Query: 162 MFHNNCENKS----FLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQ 216 FH + F S + + + + GGG+ Sbjct: 251 HFHVGSMIPTTDIVFKAASEASDIYCALVKEYGVETMTTLDCGGGLGVDYDGTRSGSSDM 310 Query: 217 RLKEFSEKYSVQIYLEP 233 + E+Y+ I Sbjct: 311 SVAYGLEEYASSIVQAV 327 Score = 42.8 bits (99), Expect = 0.079, Method: Composition-based stats. Identities = 28/322 (8%), Positives = 63/322 (19%), Gaps = 41/322 (12%) Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------------ 111 G E ++ KA Sbjct: 220 KHGKFGLPAEKIYEVAKKLKALNKLHWLKLLHFHVGSMIPTTDIVFKAASEASDIYCALV 279 Query: 112 --------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--KNVNGL 161 L GL ++ + S + + V Sbjct: 280 KEYGVETMTTLDCGGGLGVDYDGTRSGSSDMSVAYGLEEYASSIVQAVRLKCDYHGVPHP 339 Query: 162 MFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221 + S ++ + + + Sbjct: 340 VLCTESGRAMASYHSMIILEALSAIPEPKDDEDEATTEQLHGRIRDL-----SSKLQPTG 394 Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE---- 277 S ++++ + + + + ++ SV + +PDY Q Sbjct: 395 LSMSSHAVHIKKHGIEMYKLGKKLSKSVTTDAHTIYNYHMNLSVFSLMPDYWGIQHLFPM 454 Query: 278 -SATIYPNTGPYTAMVCGRSCLAG---DIFGEFHFEKPVKIGD------RISFEDVAGYN 327 + + A + +C + D F P+ D ++ Y Sbjct: 455 MPVSRLDEKPTHKATLVDVTCDSDGKVDKFIRDTETMPLHPLDPKLGGYYVAVLLTGAYQ 514 Query: 328 INRKNWFNGINMPTIAVKNVDG 349 N N P++ G Sbjct: 515 EALSNKHNLFGGPSLVRVVGTG 536 >gi|156740573|ref|YP_001430702.1| alanine racemase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156231901|gb|ABU56684.1| alanine racemase domain protein [Roseiflexus castenholzii DSM 13941] Length = 349 Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 23/213 (10%), Positives = 54/213 (25%), Gaps = 14/213 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP +ID +L N+ G+ +K + + G T L Sbjct: 6 LDTPAVVIDLDRLEANIARFQAHLDRHGIANRPHIKTHKIPQIAQMQIAAGAVGITCQKL 65 Query: 61 YEVM-LGHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E + YN A + + ++ ++ + Sbjct: 66 GEAEVMADAGITDIFLPYNILGAAKLERLVALARRVQVSVTADSPDVVTGLGAAMSGAGL 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 ++ + + + + + E + GLM + + Sbjct: 126 ELPVLVECD----TGMGRCGVQTPAEAAELAFQIARTAGLRFGGLMTYPSSPA-----IG 176 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY 209 ++ + +E +S GG Sbjct: 177 PFMREAVRLLRERGLPVERVSGGGTAGMWHAHE 209 >gi|71278090|ref|YP_271044.1| decarboxylase domain-containing protein [Colwellia psychrerythraea 34H] gi|71143830|gb|AAZ24303.1| decarboxylase domain protein [Colwellia psychrerythraea 34H] Length = 171 Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 11/44 (25%) Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331 + G C DI + +GD + Y Sbjct: 113 ELVNIVGPICNPLDILADKIMLPKASMGDYVVVFQSGTYVATAS 156 >gi|328676829|gb|AEB27699.1| Alanine racemase [Francisella cf. novicida Fx1] Length = 365 Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVM 64 I Q L NN+ + K+ +K A + + + +D +++ E Sbjct: 6 ISAQTLRNNIRIIKEYVGS--AKICFPVKANAYGHGLELIVEHSHDLVDFFAVANVLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + + ID +LS + + + K + A+ +KK + +N Sbjct: 64 RVLDVVEKPVMIFG-VIEYNYIDRILSKNIRVSIQDYNDIEKLEKFAKYYNKKPFVHVNL 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + ++ + + + ES+ + G+ H C + + K Sbjct: 123 NTGMNRMGVDYSDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173 >gi|323528944|ref|YP_004231096.1| alanine racemase domain-containing protein [Burkholderia sp. CCGE1001] gi|323385946|gb|ADX58036.1| alanine racemase domain protein [Burkholderia sp. CCGE1001] Length = 376 Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 39/148 (26%), Gaps = 9/148 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID +++ N+ GVK +K + ++ G T S+L Sbjct: 6 LNTPAALIDVERMQRNIARMQQRMNALGVKFRPHVKTTKCEQVVRAQMDAGASGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V + I+ ++V+ A Sbjct: 66 KEAEQFFAG-GVRDIVYAVGMAPTKLPQALALRRQGCDLKIVADSVACAEAI--VAFGRE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRL 143 + + L Sbjct: 123 HDERFEVWIEIDVDGHRSGIAPEDDMLL 150 >gi|163795243|ref|ZP_02189211.1| urocanate hydratase [alpha proteobacterium BAL199] gi|159179641|gb|EDP64170.1| urocanate hydratase [alpha proteobacterium BAL199] Length = 378 Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 49/174 (28%), Gaps = 9/174 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSL 60 I TP +ID NLD + G+++ K + + + + G + Sbjct: 16 IDTPALVIDLDAFERNLDRMAAFSHDTGIRVRPHAKTHKSPAVARQQMQRGAVGQCCQKV 75 Query: 61 YEVMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E + N + + Q+ + + A++ Sbjct: 76 GEAEVLVHGGINNVLVSNQIVGANKVARLAALARRAWIGVCADDPIQVKAYGEAARRAQV 135 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170 ++ + + V + P + E K ++ GL ++ Sbjct: 136 ELHVLVEIDVGAA----RCGVMPGAPAVELAKYIADTPGLVFEGLQAYHGSAQH 185 >gi|254374164|ref|ZP_04989646.1| alanine racemase [Francisella novicida GA99-3548] gi|151571884|gb|EDN37538.1| alanine racemase [Francisella novicida GA99-3548] Length = 365 Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVM 64 I Q L NN+ + K+ +K A + + + +D +++ E Sbjct: 6 ISVQTLRNNITIIKEYVGS--AKICFPVKANAYGHGLELIVEHSHDLVDFFAVANVLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + + ID +LS I + + K + A+ +KK + +N Sbjct: 64 RVLDVVEKPVMIFG-VIEYNYIDRILSKNIRISIQDYNDIEKLEKFAKYYNKKPFVHVNI 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + ++ + + + ES+ + G+ H C + + K Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQQAYESDWLILEGVYSHLACADNRDHPTNIKQK 173 >gi|73662116|ref|YP_300897.1| alanine racemase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123643046|sp|Q49Z24|ALR_STAS1 RecName: Full=Alanine racemase gi|72494631|dbj|BAE17952.1| alanine racemase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 382 Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 34/340 (10%), Positives = 89/340 (26%), Gaps = 40/340 (11%) Query: 7 YL-IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMD-GTTSSSL 60 Y+ +D ++ N + N V + +K + + L ++L Sbjct: 10 YVNVDLNAIVANFQVFQKLHPNKTVMPV--VKANGYGLGSIKVARQLMDNGAEFFAVATL 67 Query: 61 YEV-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E L + V + A+ + + + K+ + K + Sbjct: 68 DEAIELRMHGIDAKILVLGVIPTEHINKAIQHRVAITVPSKSWLVEAVKEIPESNEKDLW 127 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + R + E+ K+ IE + + + + Sbjct: 128 IHVKLDTG--------MGRLGMKTAEEYKEVIELINGHSHLIFEGVFTHFACADEPGDSM 179 Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + F + ++I KD + + Y + Sbjct: 180 NRQQTMFEEIVGQADKPDYIHSQNSAGALMKDTQFCNAVRVGISLYGYYPSAYVKSNVKV 239 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEA-------HVPDYLLYQESATIYPNTGPYT 289 + + + ++ + SV V + ++ Sbjct: 240 HLKPSAQWISEIVQTKLLHAGESVSYGSVYTADEKTKIGVIPVGYADGYPRMM---KGFS 296 Query: 290 AMVCGRSCLAGDIFGEFHFEK-------PVKIGDRISFED 322 V G+ C + G+ ++ +++GD++ D Sbjct: 297 VNVNGKQCE---VIGKVCMDQTIIKIPDEIQVGDKVIIMD 333 >gi|218288214|ref|ZP_03492513.1| alanine racemase [Alicyclobacillus acidocaldarius LAA1] gi|218241573|gb|EED08746.1| alanine racemase [Alicyclobacillus acidocaldarius LAA1] Length = 400 Score = 44.7 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 39/338 (11%), Positives = 76/338 (22%), Gaps = 33/338 (9%) Query: 5 PYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYMDG-TTSS 58 P + +ID L +N+ G L++A+K A + D L + + Sbjct: 4 PLFAVIDLGHLSHNIRYLQSRL-RPGTSLMVAVKADAYGHGVRAVVDRLAREGVRQVAVA 62 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 S+ E + A I +S +++ ++L + Sbjct: 63 SIEEALEIRAFDRDVNILVLGAVTPDACMKAAEAEVEIALTDLSPIDEIPRLPKRLRVHL 122 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK--SFLCFS 176 L + K + + + + + G Sbjct: 123 PLDTGMNRLGVKRTDEAVALARAIAAREDLELVGA------GTHLAAADAEDPAHAAGQM 176 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 LK + + I G ++ Y A Sbjct: 177 ERLKAFVRALEAAGLRPPRIHAGNSAALLR---DPDWHLDMVRVGIAAYGYSPDPSVLPA 233 Query: 237 IVTNTTTL-NTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTGPY 288 VL +++ + + + N G Sbjct: 234 PSLRPVMSLYAGVLRVAQAEAGETVGYGATFVVTRPMVIATVAGGYADGYPRHLSNEGEV 293 Query: 289 TA-----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 V GR C D V GD ++ Sbjct: 294 LVRGELRPVIGRVC--MDQLMVDVTGLDVATGDVVALF 329 >gi|324503634|gb|ADY41575.1| Ornithine decarboxylase [Ascaris suum] Length = 344 Score = 44.4 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 72/259 (27%), Gaps = 51/259 (19%) Query: 143 LGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWIS 197 +GE + + V G+ F S ++ + + F + + Sbjct: 37 MGEAPELLSMAADLGVKVVGISFSIGAGACSLGIYAYAIAQACRLFGVAASLGHDLCVLD 96 Query: 198 LGGGIHFTDKD--YPVKDFCQRLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTV 248 +GGG + ++Y V+I EPG + +L T + Sbjct: 97 IGGGFPCGSPTRGPSFSQVAATISASLDEYFPESSFGHVRIIAEPGRYFAASVFSLITNI 156 Query: 249 LDIS------------------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG---- 286 +D + S + + + + Sbjct: 157 IDKRAVDASVVTNDVFDSGTAGFVYQTNEGFFGSFGCRLTAFCEPKCRPLVECVHDVSAD 216 Query: 287 PYTA-MVCGRSCLAG-DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN-------GI 337 YT + G + DI ++IG+ + ++D+ Y++ N G Sbjct: 217 NYTYATILGPTLSNNVDIVQPVARLPQMQIGEWLLWDDMGAYSMG-----NRETLGEDGQ 271 Query: 338 NMPTI-AVKNVDGTIKAIR 355 PTI + + R Sbjct: 272 PSPTIYYFVDDERWQHMSR 290 >gi|88800247|ref|ZP_01115814.1| alanine racemase [Reinekea sp. MED297] gi|88776962|gb|EAR08170.1| alanine racemase [Reinekea sp. MED297] Length = 358 Score = 44.4 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 90/328 (27%), Gaps = 34/328 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFAAWGMFDTLNQYM---DGTTSSSLYEV 63 LI + L +NL + A + A+ K A D + + DG SSL E Sbjct: 8 LISRSALTHNLGRVRHYAPQANI---WAVIKANAYGHGADVAAEALSAADGFAVSSLDEA 64 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + + + + + ++ +Q+ + + + + L+I Sbjct: 65 IALRDSGVSHPILLLSGVTQADHWAEAAALGLHCVVHSRTQVEQIRTQTLPSPLSVWLKI 124 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + FS L S++ NV+ + + + + Sbjct: 125 DSGMHRLGLTPENVPAAFSAL---------SQVSNVSVIGALTHMASADVPERDNATRQQ 175 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 + F S+G V D+ + + + + Sbjct: 176 FEVFQAASPATLQTSVGNSATILRHADCVGDWVR-PGIMLYGATPTTEASAADYGLQPVM 234 Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLL----------YQESAT--IYPNTGPYTA 290 V+ + + + + Y A G Sbjct: 235 AFEAPVIAVRDIAAGESVGYGHRWQASRPARIATLAAGYGDGYPRHAPDGTPVWLGGQRV 294 Query: 291 MVCGRSCLAGDIFGEFHFE--KPVKIGD 316 + GR + D+ + VK+GD Sbjct: 295 PIAGRV--SMDLITVDVSLLSEEVKVGD 320 >gi|158422863|ref|YP_001524155.1| alanine racemase [Azorhizobium caulinodans ORS 571] gi|158329752|dbj|BAF87237.1| alanine racemase [Azorhizobium caulinodans ORS 571] Length = 381 Score = 44.4 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 2/84 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60 + TP ++D+ ++L N+ GV L LK + + + +G T S+L Sbjct: 10 LPTPCLILDEARMLRNIARLKTHLDGLGVALRPHLKTLKSVEAARRVLKDGNGPATVSTL 69 Query: 61 YEVMLGHEKFGGETHAYNVAYKDC 84 E G Y V Sbjct: 70 KEAE-VFAAAGVRDIIYAVGIAPQ 92 >gi|21325381|dbj|BAC00003.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] Length = 380 Score = 44.4 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 2/101 (1%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59 MI TP LID+++L N+ + L +K + G T ++ Sbjct: 39 MIDTPAVLIDRERLTANISRMAAHAGAHEIALRPHVKTHKIIEIAQMQVDAGARGITCAT 98 Query: 60 LYEVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN 99 + E + F AY + D + + + I Sbjct: 99 IGEAEIFAGAGFTDIFIAYPLYLTDHAVQRLNAIPGEISIG 139 >gi|19553808|ref|NP_601810.1| hypothetical protein NCgl2520 [Corynebacterium glutamicum ATCC 13032] gi|62391448|ref|YP_226850.1| hypothetical protein cg2890 [Corynebacterium glutamicum ATCC 13032] gi|41326789|emb|CAF21271.1| PUTATIVE AMINO ACID PROCESSING ENZYME [Corynebacterium glutamicum ATCC 13032] Length = 343 Score = 44.4 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 2/101 (1%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59 MI TP LID+++L N+ + L +K + G T ++ Sbjct: 2 MIDTPAVLIDRERLTANISRMAAHAGAHEIALRPHVKTHKIIEIAQMQVDAGARGITCAT 61 Query: 60 LYEVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN 99 + E + F AY + D + + + I Sbjct: 62 IGEAEIFAGAGFTDIFIAYPLYLTDHAVQRLNAIPGEISIG 102 >gi|291279676|ref|YP_003496511.1| arginine decarboxylase [Deferribacter desulfuricans SSM1] gi|290754378|dbj|BAI80755.1| arginine decarboxylase [Deferribacter desulfuricans SSM1] Length = 613 Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats. Identities = 41/347 (11%), Positives = 90/347 (25%), Gaps = 55/347 (15%) Query: 14 LLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY----MDGTTSSSLY 61 L ++++ + LK L + G + S Sbjct: 54 LKKHVNSLFNKFNKYIKEYEYSGKFSSVFPLKVNQYPNFVKYLMEKTKGKNYGLEAGSKP 113 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E+++ + +KD E+ A + T+ +++L + A+++ Sbjct: 114 ELIIAMSYVNEKCSIVVNGFKDKEMISLGFISAKMGQNITLTIEGLNELETIVEVAKEMG 173 Query: 116 KKI---GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFH 164 GLRI S I A S+ G + IE+ + + FH Sbjct: 174 PPYPNIGLRIKLHSSGIG-IWAKSGGINSKFGLTSVELIEALRILKEEGLIDYLTMIHFH 232 Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR--- 217 + + + ++ I +GGG+ + Sbjct: 233 IGSQISEISPVKKALREAGNIYAELYKMGAKNLKKIDIGGGLAVEYSQHKTLHSINYTLD 292 Query: 218 ------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265 + I++E G + + L VL++ + + Sbjct: 293 EYASDVVFLLKMIANNKGVPEPDIFIEAGRYVAASHAVLVVPVLELF--SQEYNEQKLCL 350 Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV 312 + H P + N + + D + Sbjct: 351 KEHNPPLIEELYELYNTINEKNAVEFLH----DSLDHMESLLTLFDL 393 >gi|254467580|ref|ZP_05080989.1| threonine aldolase, low-specificity [Rhodobacterales bacterium Y4I] gi|206684328|gb|EDZ44812.1| threonine aldolase, low-specificity [Rhodobacterales bacterium Y4I] Length = 387 Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 66/214 (30%), Gaps = 18/214 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57 I+TP ++D L N+ K G++ + K + + + G Sbjct: 27 IQTPALVLDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVAKLQEELGGAVGVCCQK 86 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------ 111 S EV + G + + +D + L+ + T+ ++ + A Sbjct: 87 VSEAEV---FARGGIKDILVSNQVRDPQKIDRLARLPKLGARTIVCVDDIDNVADLSAAA 143 Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169 ++ + I+ + ++ ++ S I+ G M H + Sbjct: 144 QKHGTELEVFVEIDCGAGRCGVTTTEAVVEIAKAVNAAENLKFSGIQAYQGAMQHMDSYE 203 Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGG 200 A + + + + E +S GG Sbjct: 204 DRKAKLDIAIAQVADAVEGLKAEGIECELVSGGG 237 >gi|254448149|ref|ZP_05061612.1| alanine racemase [gamma proteobacterium HTCC5015] gi|198262275|gb|EDY86557.1| alanine racemase [gamma proteobacterium HTCC5015] Length = 323 Score = 44.4 bits (103), Expect = 0.029, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 83/309 (26%), Gaps = 20/309 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG-MFDTLN--QYMDGTTSSSLYEVML 65 ID + + +N+ A + ++L A+K A + L+ + +D +S+ E + Sbjct: 9 IDLEAIRHNVKVAKRAAPQS--RVLAAVKADAYGHGLTRVLSAFEEVDALAVASVEEAVA 66 Query: 66 GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125 + + + + +F Q + ++ + L + Sbjct: 67 LRAVSDKDIVVLQGIRQPEHLALCTKHALQPVF---HQSQQLDWLSRWSSQDSMLSVWLK 123 Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185 V L R + D + + V + +++S LK E+ Sbjct: 124 VDSGMHRLGFDLDAVERAFVRLSD--HAAVNRVACMTHMACADDRSDDYTLQQLKAFERV 181 Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEKYSVQIYLEPGEAIVTNTT 242 + + + Y L F + L+P + Sbjct: 182 TADLSAPRSAANSACVLGWPQAHYDWVRPGIMLYGASPFIGDTAQDWGLQPAMRLTAPIV 241 Query: 243 TLNTT-----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSC 297 + V + + V D + +T + GR Sbjct: 242 AIKHCRKGDAVGYGRSWVCPKPMTLGVVAIGYGDGYPRHANNQTPAWVKGHTTHLVGRV- 300 Query: 298 LAGDIFGEF 306 + D+ Sbjct: 301 -SMDMIAID 308 >gi|301167975|emb|CBW27561.1| alanine racemase [Bacteriovorax marinus SJ] Length = 375 Score = 44.4 bits (103), Expect = 0.030, Method: Composition-based stats. Identities = 43/332 (12%), Positives = 99/332 (29%), Gaps = 28/332 (8%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG-MFDTLN----QYMDG-TTSSSLYE 62 I +KL NN I K++ +K A + + + +SL E Sbjct: 9 ISFEKLENNYKKLKEIC--VDNKIIFMVKANAYGHGVIPIVRHSVEKLGITEFGCASLGE 66 Query: 63 VMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 +L E+ E + ++ + A + II ++ + + + Sbjct: 67 ALLLREELYDLEFEIYVFSDVQVELRECAEIYLNRRIIPVISNRDDLDFILNSREFENFP 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 L I + ++ L + + I + +++ ++ + F Sbjct: 127 LFIKFNTGMNRLGLEMDKVDEVIRSIRVSGRKSIYHLMTHLSSSSLPIKKNKRNIIQFE- 185 Query: 178 MLKNIEKEFGHFITQIEWISL--------GGGIH--FTDKDYPVKDFCQRLKEFSEKYSV 227 + I+K F ++E S+ G G+ + L ++S+ Sbjct: 186 NFEKIKKAFSDAGIEVERTSIANSGAIEQGAGLGETHVRPGLMMYGPSSMLPQYSDLSLW 245 Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285 +I + +++ + + V D + T + Sbjct: 246 SGEIISKLETYVISIFDVEKGQPVGYGATPCPSKGKVAIVALGYGDGFTTRYIGTHLYHK 305 Query: 286 GPYTAMVCGRSC-LAGDIFGEFHFEKPVKIGD 316 V GR +F + + +K+GD Sbjct: 306 -DIKGKVVGRVNMDMAQVFFDENSLPDLKVGD 336 >gi|34556973|ref|NP_906788.1| arginine decarboxylase [Wolinella succinogenes DSM 1740] gi|34482688|emb|CAE09688.1| ARGININE DECARBOXYLASE (SPEA) [Wolinella succinogenes] Length = 615 Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 49/300 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P L + +D + + K + LK L + Sbjct: 46 PLLLRFPHLIKKQVDKIFTHFETSIKQYHYKGQFKAVFPLKVNQFPNFVLPLVELSQNRC 105 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106 G + S E+++ + +KD E+ A + + T+ +++L Sbjct: 106 YGLEAGSKAELIIAMAYTNKGSPITVNGFKDKEMISLGFIAANMGHEITLTIEGLNELET 165 Query: 107 FKDKAQ---KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI--------ESEI 155 + A+ K IGLRI S I A S+ G + + I Sbjct: 166 IIEVAEEMGKPCPNIGLRIRLHSSGIG-IWAKSGGINSKFGLTSTELLEGIRLLEKHKLI 224 Query: 156 KNVNGLMFHNNCENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY-- 209 + + FH + ++ I E ++ +++GGG+ + Sbjct: 225 EKFTMIHFHIGSQISDISPLKKAMREAGNIYAELRKMGAKNLKSVNIGGGLAVEYTQHEG 284 Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + + ++ IY+E G I + L VL++ Sbjct: 285 SPNRNYTLDEFAGDVVFSLKEIAKNKKEPEPDIYIESGRYIAASHALLVAPVLELFSQEY 344 >gi|332184182|gb|AEE26436.1| Alanine racemase [Francisella cf. novicida 3523] Length = 365 Score = 44.0 bits (102), Expect = 0.035, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 62/187 (33%), Gaps = 12/187 (6%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVMLGH 67 Q L NN+ V++ +K A + + + +D +++ E Sbjct: 9 QTLRNNIKLIKEYVG--NVRICFPVKANAYGHGLELIVQHSHDLVDFFAVANVLEAFRVL 66 Query: 68 EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVS 127 + + + ID +LS + + + K + A+ +KK + +N + Sbjct: 67 DVVQKPVMIFG-VIEYNYIDRILSKNIRVSIQDYNDIEKLEKFAKYYNKKPFVHVNINTG 125 Query: 128 YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG 187 ++ + + + ES+ + G+ H C + + KN Sbjct: 126 MNRMGVDYNDAC-----RTIQKAFESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIV 180 Query: 188 HFITQIE 194 F ++ Sbjct: 181 EFTKELS 187 >gi|254469935|ref|ZP_05083340.1| alanine racemase, N-terminal domain protein [Pseudovibrio sp. JE062] gi|211961770|gb|EEA96965.1| alanine racemase, N-terminal domain protein [Pseudovibrio sp. JE062] Length = 375 Score = 44.0 bits (102), Expect = 0.036, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 44/134 (32%), Gaps = 4/134 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60 ++TP L+D+ + N+ K GV L LK + + L + D T S+L Sbjct: 5 LQTPCLLLDEAAMNRNIKGMADRFKQIGVPLRPHLKTAKSIDVARILQDHGADRWTVSTL 64 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVS--QLNKFKDKAQKLHKKI 118 E FG + Y V+ +++ ++ ++ + Sbjct: 65 KEAEY-FSSFGLKDILYAVSIVPQKMERIMQLNRAGAQMSICLDSTEMATHLSTMTLDGP 123 Query: 119 GLRINPSVSYSKFI 132 R+ V Sbjct: 124 KPRVYLEVDVDGHR 137 >gi|153865083|ref|ZP_01997738.1| hypothetical protein BGS_0150 [Beggiatoa sp. SS] gi|152145421|gb|EDN72261.1| hypothetical protein BGS_0150 [Beggiatoa sp. SS] Length = 86 Score = 44.0 bits (102), Expect = 0.036, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 20/79 (25%), Gaps = 1/79 (1%) Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVK 345 + G C + I D IS + +F MP + Sbjct: 2 ENPITLGGPLCTRMQVSTTKGELPEANINDIISIYYSCADGFSANLFYFLTAPMPAEDIV 61 Query: 346 NVDGTIKAIREFSYNDYYN 364 A R + D+ + Sbjct: 62 QNGQHFVARRRGTKEDFLS 80 >gi|257484843|ref|ZP_05638884.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 221 Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 49/171 (28%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ N+ + GV+L +K + + G T S+L Sbjct: 10 LDTPVALLDVPRMQRNIQRMQHRINELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 69 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A D + + C I+ ++V+ A Sbjct: 70 KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVAAAQSI--VAFGQRH 127 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + ++ G+M H Sbjct: 128 DENFDVWIEIDCDGHRSGLTV--DDPSLVEVARTLIEGGMHLRGVMTHAGS 176 >gi|225686513|ref|YP_002734485.1| alanine racemase domain-containing protein [Brucella melitensis ATCC 23457] gi|256262349|ref|ZP_05464881.1| alanine racemase domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|225642618|gb|ACO02531.1| alanine racemase domain protein [Brucella melitensis ATCC 23457] gi|263092078|gb|EEZ16375.1| alanine racemase domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|326410894|gb|ADZ67958.1| alanine racemase domain-containing protein [Brucella melitensis M28] gi|326554185|gb|ADZ88824.1| alanine racemase domain-containing protein [Brucella melitensis M5-90] Length = 355 Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 88/324 (27%), Gaps = 15/324 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP L+D +++ N++ A AGVKL +K + G T L Sbjct: 11 VDTPAILVDVDRVVANIEKAQVHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + YN+ + + I TV AQ + Sbjct: 71 GEAEVMADAGLTDIFLPYNILGLEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKR 130 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + P I + + L Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAH---IIEKSAGLCFGGLMTYPATGRGDEAERWL 187 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 + E IS GG P + + + Y + + G A + Sbjct: 188 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299 + + +S I+D+ +A D L + + A V G S Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301 Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322 G + G+ + IGDR+ D Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322 >gi|257452886|ref|ZP_05618185.1| alanine racemase, biosynthetic [Fusobacterium sp. 3_1_5R] gi|257466749|ref|ZP_05631060.1| alanine racemase, biosynthetic [Fusobacterium gonidiaformans ATCC 25563] gi|315917898|ref|ZP_07914138.1| alanine racemase [Fusobacterium gonidiaformans ATCC 25563] gi|317059428|ref|ZP_07923913.1| alanine racemase [Fusobacterium sp. 3_1_5R] gi|313685104|gb|EFS21939.1| alanine racemase [Fusobacterium sp. 3_1_5R] gi|313691773|gb|EFS28608.1| alanine racemase [Fusobacterium gonidiaformans ATCC 25563] Length = 354 Score = 44.0 bits (102), Expect = 0.038, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 45/159 (28%), Gaps = 19/159 (11%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYMDG-TTSSSLYEV 63 ID + L +N+ + GV + +K A + L + +SL E Sbjct: 7 IDTENLRHNIREIQKRAEGFGVWGV--IKANAYGLGVLPVAKILAEEGIHYFAVASLEEA 64 Query: 64 MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 GE + D EI S I + +L A K + + Sbjct: 65 KEVRNANITGEILILGSLFHD-EILEAESLDFHINVSCREELEWIAKNAPKTKIHLKIDT 123 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL 161 + G + + + N+ G+ Sbjct: 124 ----------GMTRLGFSYQEGMEVIEFAKKLSLNITGV 152 >gi|115401094|ref|XP_001216135.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114190076|gb|EAU31776.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 367 Score = 44.0 bits (102), Expect = 0.039, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 55/212 (25%), Gaps = 13/212 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP ++D + N+ + G+ + LK + + L + G + + Sbjct: 13 LDTPSMIVDLDLMEANIKKLMDKLLPTGLSIRPHLKTTKSAILAGKLAKAGAKGGCVAKI 72 Query: 61 YEVML-GHEKFGGETHAYNVAYKDCEID----AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + F + I+ ++ + D + Sbjct: 73 SEAEAIAAQGFDDLLITCEIVGPAKVQRLVELYRKHRKIRIVVDSEVAASAINDALARSG 132 Query: 116 KKIGLRINPSVSYSKFILADPNR-PFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + P L ++ V G H + Sbjct: 133 IDEPIATLIDLDVGLHRTGVKPGEPALALARHVGGLKHLKLIGVQGYEGHLQHLHDYNDR 192 Query: 175 FSAMLKNI------EKEFGHFITQIEWISLGG 200 + L+++ F IE ++ GG Sbjct: 193 KTQCLESMRTLTSTADAFRKAGFNIEVVTTGG 224 >gi|295688285|ref|YP_003591978.1| alanine racemase domain-containing protein [Caulobacter segnis ATCC 21756] gi|295430188|gb|ADG09360.1| alanine racemase domain protein [Caulobacter segnis ATCC 21756] Length = 401 Score = 44.0 bits (102), Expect = 0.040, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 25/86 (29%), Gaps = 1/86 (1%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61 +TP ++D+ L N+D + AGV+L K + + G ++ Sbjct: 11 QTPLLVVDRAALERNIDRMQALCDAAGVRLRAHGKTHKCSTLGRLIVARGAVGLCCQTVG 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEID 87 E + Sbjct: 71 EAEAYVAGGIKDVLVTAPVPAWGPPR 96 >gi|299065741|emb|CBJ36917.1| conserved protein of unknown function, Alanine racemase domain protein [Ralstonia solanacearum CMR15] Length = 376 Score = 44.0 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 79/322 (24%), Gaps = 31/322 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 I TP LID ++ N++ GV+ +K + L G T S+L Sbjct: 6 INTPAALIDVARMTRNIERMQQRLDALGVRFRPHVKTTKCEPVVRAQLAAGAQGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V + I+ ++V+ A Sbjct: 66 KEAEQFFAA-GIRDIVYAVGMAPAKLPQALALRRRGCDLKIVADSVTCAQAI--AAFGGE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC- 174 + V P + + G++ H + Sbjct: 123 HGEAFDVWIEVDVDGHR--SGIAPDDDRLIAVGRVLAEGGMRLGGVLAHAGSSYEYHAHD 180 Query: 175 --------FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + E +S+G + + + Sbjct: 181 ALVRIAELERSGCVRAAERLRAAGWPCETVSIG-STPTALSAEHLDGVTEVRAGVYVMFD 239 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 + ++ A+ ++ TTV+ E+ + D S Sbjct: 240 LVMHNVGVCALSDIALSVLTTVIGHQEDKGWA----------IVDAGWMAMSRDRGTQKQ 289 Query: 287 PYTAMVCGRSCLAGDIFGEFHF 308 P+ G++ GE+ Sbjct: 290 PHDFGYGLVCSEHGEVLGEYLM 311 >gi|212702875|ref|ZP_03311003.1| hypothetical protein DESPIG_00908 [Desulfovibrio piger ATCC 29098] gi|212673737|gb|EEB34220.1| hypothetical protein DESPIG_00908 [Desulfovibrio piger ATCC 29098] Length = 371 Score = 44.0 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 11/170 (6%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYE 62 TP L++ +KL N+D GV L LK + + G T S+L E Sbjct: 9 TPCLLLEDEKLQANMDRLARRLHERGVSLRPHLKTCKNIEIARRCMESPTGPATVSTLAE 68 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQKLHKK 117 G Y V +++ V+ ++ + + A++ + Sbjct: 69 AEY-FAAGGVRDICYAVGIAPNKLERVVELRRRGIDLSVVLDNEESARLLVNFARQRDCR 127 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + RP + + V G++ H Sbjct: 128 LAVLLEIDCDGH----RAGLRPDDPRLTAIAALLRDGGQEVRGVLTHAGS 173 >gi|227548088|ref|ZP_03978137.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079814|gb|EEI17777.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length = 229 Score = 44.0 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 7/108 (6%) Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNL-----VIVDSSVEAHVPDYLLYQESATIY 282 +++LEPG +++ + V + L + + DYL+ Sbjct: 92 RLHLEPGRSLLDGCGVILAQVAFVKTRSDGLPLVGLHMNRTQCRTTSDDYLVDPILVKRT 151 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFH--FEKPVKIGDRISFEDVAGYNI 328 P + A + G C+ ++ F + V GD I+ + AGY + Sbjct: 152 PASEEIEAFLVGAYCIEDEVILRRRIRFPQGVSAGDIIAIPNTAGYFM 199 >gi|254373953|ref|ZP_04989435.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|151571673|gb|EDN37327.1| conserved hypothetical protein [Francisella novicida GA99-3548] Length = 520 Score = 44.0 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 30/259 (11%), Positives = 70/259 (27%), Gaps = 30/259 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG-- 54 P L + L N +D + A L +K + + Y Sbjct: 23 PLVLYFEHILKNKIDKLYNSFEKAISNLGYTGKYSLAYPIKVNPEQKIIKAIYDYHQHNQ 82 Query: 55 ----TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 + E++ +KD + I + + + + Sbjct: 83 VSLDYEVGTKSELLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEI 142 Query: 111 AQK---LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLM 162 L + ++ + + F + F + + I N + L Sbjct: 143 NIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQKFGLSLSQINECINFLKTNQLQQKLLLLH 202 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDF 214 H + KS A ++ + + + +E+I GGG+ Y + Sbjct: 203 SHIGSQLKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGGLAVNYDEYDRPSYDFDSY 262 Query: 215 CQRLKEFSEKYSVQIYLEP 233 + + + + Y+ + Sbjct: 263 AKTIIKNCKYYAEYYNCDM 281 >gi|157164932|ref|YP_001467250.1| putative GlnD family protein [Campylobacter concisus 13826] gi|112801837|gb|EAT99181.1| metal-activated pyridoxal enzyme [Campylobacter concisus 13826] Length = 368 Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 50/209 (23%), Gaps = 14/209 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 I TP LIDK +L NL+ V L K + G T + + Sbjct: 6 IDTPALLIDKDIVLKNLEKMQKYADKFNVSLRPHTKTHKMPYFAKLQVKCGAKGITVAKV 65 Query: 61 YEVM-LGHEK----FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + E F + + + V L + + Sbjct: 66 GEAEVMAKEGLSDIFIANEIVTRQKFARIIALVRSGVKVSFGVDNVGVLRLIDEVFGEAG 125 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 + L + V NR + + + + N + Sbjct: 126 EIARLLVEIEVGE--------NRSGVIEEGDFRALMGAFKECKNVEFCGVFSHDGHSYKA 177 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHF 204 + + +++ + + Sbjct: 178 KDKRECEQIFRVATDRTLKFADIAREFGY 206 >gi|326381918|ref|ZP_08203611.1| hypothetical protein SCNU_03202 [Gordonia neofelifaecis NRRL B-59395] gi|326199344|gb|EGD56525.1| hypothetical protein SCNU_03202 [Gordonia neofelifaecis NRRL B-59395] Length = 354 Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 41/133 (30%), Gaps = 6/133 (4%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59 M TP+ +D +L NL + G++L K + + G + ++ Sbjct: 1 MPDTPFLFVDVDRLDRNLTAMADWAERHGIRLRPHAKTHKCAEIARRQLEAGAVGLSVAT 60 Query: 60 LYEVML-GHEKFGGETHAY----NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 + E + AY + + ++V+ + + D Sbjct: 61 IGEAEIFAELGVDDLFIAYPLWLSENKARRLRALAGRVQLAVGADSVAGVRRLADAIGDT 120 Query: 115 HKKIGLRINPSVS 127 + + ++ + Sbjct: 121 TATVLIEVDSGMH 133 >gi|257453160|ref|ZP_05618459.1| Serine racemase [Fusobacterium sp. 3_1_5R] gi|317059695|ref|ZP_07924180.1| serine racemase [Fusobacterium sp. 3_1_5R] gi|313685371|gb|EFS22206.1| serine racemase [Fusobacterium sp. 3_1_5R] Length = 369 Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 15/211 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 +KTP L++ L +N+ + G +L +K + G+ + + G +L Sbjct: 6 LKTPTILLNIGVLKDNIHRYQKLCNQYGKELWPMIKTHKSKGILEIQIEEGASGALCGTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSN-----CDTIIFNTVSQLNKFKDKAQKLH 115 E + +K G + Y E + I + K + A K Sbjct: 66 EEAEMC-QKMGVKKIMYAYPVSTKENIQRVIELASKSYFIIRLDNEEGAKKINEMAIKED 124 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN------ 169 I I +F ++ N EK K + ++ H Sbjct: 125 VIINYTIIVDSGLHRFGVSVDNILG--FAEKLKQFQNLKFVGISSHPGHVYSSTCSKDIE 182 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200 K L + I++++ G Sbjct: 183 KYVEDECDTLHKAKSILEEAGYSIKYVTTGS 213 >gi|120603560|ref|YP_967960.1| arginine decarboxylase [Desulfovibrio vulgaris DP4] gi|120563789|gb|ABM29533.1| arginine decarboxylase [Desulfovibrio vulgaris DP4] gi|311232696|gb|ADP85550.1| arginine decarboxylase [Desulfovibrio vulgaris RCH1] Length = 639 Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 80/289 (27%), Gaps = 48/289 (16%) Query: 11 KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58 + L + + + +NA + + +K + + + Q+ G Sbjct: 73 ENILDSQITSLHTSFRNAIGSLGYKGEYRGIFPIKVNQQQQVVEKIAQFGSHYHHGLEVG 132 Query: 59 SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKA 111 S E++ + E YKD E + + + +L+ ++ Sbjct: 133 SKAELIAAVSQLRDREACLVCNGYKDEEFIDLGLHAVRLGFMCIFVLEMPGELDLILERG 192 Query: 112 QKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLM 162 + L K + + +S D S G ++ + L Sbjct: 193 EALGVKPIIGVRAKLSVKAGGHWTDSGGERSTFGLTTSQIVDVVDRLKEKGMLDCFKLLH 252 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207 +H + + I + ++ LGGG+ Sbjct: 253 YHLGSQVPNIRDIRAAVMEACRIYAGLVQEGAAMGFLDLGGGLAVDYDGSHTNFVSSRNY 312 Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251 D D + + ++ I E G A V + L +LD+ Sbjct: 313 TLDEYCADIVEAVMTTLDEQNIPHPHIVTESGRATVAYYSMLLFNILDV 361 >gi|312961902|ref|ZP_07776399.1| alanine racemase [Pseudomonas fluorescens WH6] gi|311283712|gb|EFQ62296.1| alanine racemase [Pseudomonas fluorescens WH6] Length = 378 Score = 43.6 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 53/171 (30%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ N+ + GV+L +K + + G T S+L Sbjct: 8 LDTPAALIDIPRMQRNIQRMQQRLNDLGVRLRPHIKTSKCLPVIHAQIAAGASGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + A + C+ ++ ++V+ AQ+ + Sbjct: 68 KEAQHCFAAGIRDVFYAVAIAPGKLPQALALRRQGCNLSLLTDSVAGAEAIVAFAQQQDE 127 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + I + + + + ++ G+M H Sbjct: 128 RFDMWIEIDCDGH----RSGLAADAPALLEVAQSLSNGGMHLRGVMTHAGS 174 >gi|330899492|gb|EGH30911.1| alanine racemase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330940623|gb|EGH43657.1| alanine racemase [Pseudomonas syringae pv. pisi str. 1704B] gi|330976056|gb|EGH76122.1| alanine racemase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 378 Score = 43.6 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 40/136 (29%), Gaps = 7/136 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ +N+ GV+L +K + + G T S+L Sbjct: 8 LDTPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A + + C I+ ++V+ A Sbjct: 68 KEAEHCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVTAARAI--VAFGQAH 125 Query: 117 KIGLRINPSVSYSKFI 132 + + Sbjct: 126 DERFDVWIEIDCDGHR 141 >gi|116691668|ref|YP_837201.1| alanine racemase domain-containing protein [Burkholderia cenocepacia HI2424] gi|116649668|gb|ABK10308.1| alanine racemase domain protein [Burkholderia cenocepacia HI2424] Length = 375 Score = 43.6 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 80/313 (25%), Gaps = 13/313 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ N+ GV+ +K + D + G T S+L Sbjct: 6 LNTPAALIDIDRMQRNIARMQTHLDALGVRFRPHVKTTKCRHVVDAQIAAGAQGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V ++ I+ +++ + A Sbjct: 66 KEAEQFFAH-GIRDIVYAVGMVPAKLGQALALRRQGCDLKIVADSLPAAHAI--AAFGRE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 + V P P + L + + G++ H + Sbjct: 123 HGERFDVWIEVDVDGHRSGIP--PDADLLIDVGRALTDGGMLLGGVLAHAGSSYEYDAPE 180 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + ++ + G + + +Y+ + Sbjct: 181 ALAAIAEQERSRTVRAAERLRTAGLPCPVVSIGSTPTALAAERLDGVTEVRAGVYVMF-D 239 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295 ++ N + + +S + + A + D S Sbjct: 240 LVMHNVGVCELSDIALSVLTTVIGHQEEKGWA-IVDAGWMAMSRDRGTQRQARDFGYGQV 298 Query: 296 SCLAGDIFGEFHF 308 AGD+ G++ Sbjct: 299 CTEAGDVLGDYLL 311 >gi|90418439|ref|ZP_01226351.1| putative alanine racemase [Aurantimonas manganoxydans SI85-9A1] gi|90338111|gb|EAS51762.1| putative alanine racemase [Aurantimonas manganoxydans SI85-9A1] Length = 368 Score = 43.6 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 20/177 (11%), Positives = 44/177 (24%), Gaps = 10/177 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL- 60 + TP L+D L +NLD +AG++L K + + Q Sbjct: 16 VDTPALLVDLDALEHNLDRMAAFAASAGIRLRPHAKTHKSPVIAHWQAQRGAVGQCVQKV 75 Query: 61 YEVM-LGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E L + + + + + A+ Sbjct: 76 GEAEILAWAGVPDILITNEIVSPRKLARVAALSKMTNIALCADDAGVVALIEAAAEAASC 135 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173 ++ + + V ++I S + G + + + Sbjct: 136 RLTVLVEIHVGA-----NRAGVGSPAAAIALAERIASSHTLIFGGLQAYHGGAQHLR 187 >gi|332654151|ref|ZP_08419895.1| alanine racemase [Ruminococcaceae bacterium D16] gi|332517237|gb|EGJ46842.1| alanine racemase [Ruminococcaceae bacterium D16] Length = 372 Score = 43.6 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 32/329 (9%), Positives = 65/329 (19%), Gaps = 25/329 (7%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM----DGTTSSSL 60 ID L +N AG + L K A A + L Q Sbjct: 12 IDLSALEHNYRALR-AMLPAGCRFLGVCKANAYGHGAVPVAQKLEQLGADMLAVACVDEA 70 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ +L T ++ D A K + + Sbjct: 71 RELRQAGITLP---ILCLGNTPVELAPMLLEYQVTQAVGDLATGQALSDAAVAAGKTLTI 127 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + S+ +R + + + + + + + Sbjct: 128 HVKLDTGMSRLGFLWQGEQTAREIARLCALPGLKAEGMFTHFADADSSEEYTMGQLTKFL 187 Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240 + + G + D + Y + Sbjct: 188 DARAALEKLGVTFKICHCGASGAVLNYPCTHIDMVRPGIALYGYYPAPEMEGLDGPGLRP 247 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-------DYLLYQESA-----TIYPNTGPY 288 T+ + + + E + + Sbjct: 248 VMTVKSRIAAVRELPAGTCVSYGRTAVLKRDSKLAVVPIGYGDGYPRSLSNRMVMEIHGV 307 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317 + GR C+ + VK GD Sbjct: 308 LCPIVGRVCMDM-CMVDVTDLPDVKPGDI 335 >gi|160941522|ref|ZP_02088855.1| hypothetical protein CLOBOL_06421 [Clostridium bolteae ATCC BAA-613] gi|158435548|gb|EDP13315.1| hypothetical protein CLOBOL_06421 [Clostridium bolteae ATCC BAA-613] Length = 394 Score = 43.6 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 34/329 (10%), Positives = 83/329 (25%), Gaps = 26/329 (7%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF--------AAWGMFDTLNQYMDGTTSSSL 60 +D ++ N+ G ++ +K A + + + T S Sbjct: 20 VDLDRIAFNVRQIK-AMAGPGTQVAAVVKADGYGHGALGIAPAIMENGASLLAVATLSEA 78 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + + D + VL +T++Q A + ++ + Sbjct: 79 VELKQAYPGYPVLIMGLTP---DRLLPYVLEYGIIQTIDTLAQARLLNRLASEKKQQAVI 135 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG-LMFHNNCENKSFLCFSAML 179 I ++ + G +++S Sbjct: 136 HIKYD----TGFHRIGFPDCPESLDEIRQICSMPWLKPEGIYSHLALKDDQSNQVQFRCF 191 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238 + E + + I D D + K + L+ +A+ Sbjct: 192 MDAVNELESEGCHFRYKHIADSIAAVDFPEYRLDMIRAGAIVYGLKGFHKGQLDIRQALT 251 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHV--PDYLLYQESATIYPNTGPYT-----AM 291 T + T + + + + + + V + T Sbjct: 252 FKTRISHITPVLKGQGVSYDYLWTAPQDTRVAALPFGYADGYPRNLRGKAMVTLRGKQVP 311 Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V G C+ + + +IGD++ Sbjct: 312 VIGVICMDQCMI-DLTDVPEAQIGDQVII 339 >gi|296536540|ref|ZP_06898627.1| threonine aldolase [Roseomonas cervicalis ATCC 49957] gi|296263136|gb|EFH09674.1| threonine aldolase [Roseomonas cervicalis ATCC 49957] Length = 368 Score = 43.6 bits (101), Expect = 0.048, Method: Composition-based stats. Identities = 37/329 (11%), Positives = 80/329 (24%), Gaps = 26/329 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP ++D NLD G KL K + + + + G + Sbjct: 16 VDTPALILDLDAFEANLDAMAAFLAPTGAKLRAHAKTHKSPVVALQQMRRGAVGQCVQKV 75 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT----IIFNTVSQLNKFKDKAQKLHK 116 E + N ++ +L+ + + + + + A+ + Sbjct: 76 AEAEALAWGGVPDILVSNEVVSPRKLARLLALSAISKVALCADDAAGVALIEQAAEAAGQ 135 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC--ENKSFLC 174 + + + V P S GL ++ +S Sbjct: 136 RATVLVEIDVGA----GRCGVAPGPEAVALASRIAASPHLIFGGLQAYHGSAQHIRSPEG 191 Query: 175 FSAMLKNIEKEFGHFITQIE-----WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229 +A ++ + Q+ +GG T ++ S + Sbjct: 192 RAAAIEAAIGHTRRSVEQLRQQGLACAIVGGAGTGTFPHEAASGVYNEVQAGSYAFMDAD 251 Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 Y +A VL + P Sbjct: 252 YAANEQAPPFRHALF---VLAQVMSAPRQGFAVLDAGHKAAPTDSGFPKVWQRPG----- 303 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 G S G++ E + G+++ Sbjct: 304 LRYAGASDEHGNLLAEDGPAPKL--GEKL 330 >gi|254372706|ref|ZP_04988195.1| alanine racemase [Francisella tularensis subsp. novicida GA99-3549] gi|151570433|gb|EDN36087.1| alanine racemase [Francisella novicida GA99-3549] Length = 365 Score = 43.6 bits (101), Expect = 0.048, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVM 64 I Q L NN+ + K+ +K A + + + +D +++ E Sbjct: 6 ISVQTLRNNITIIKEYVGS--AKICFPVKANAYGHGLELIVEHSHDLVDFFAVANVLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + + ID +LS I + + K + A+ +KK + +N Sbjct: 64 RVLDVVEKPVMIFG-VIEYNYIDRILSKNIRISIQDYNDIEKLEKFAKYYNKKPFVHVNI 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + ++ + + + ES+ + G+ H C + + K Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173 >gi|46578833|ref|YP_009641.1| arginine decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|46448245|gb|AAS94900.1| arginine decarboxylase [Desulfovibrio vulgaris str. Hildenborough] Length = 659 Score = 43.6 bits (101), Expect = 0.049, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 80/289 (27%), Gaps = 48/289 (16%) Query: 11 KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58 + L + + + +NA + + +K + + + Q+ G Sbjct: 93 ENILDSQITSLHTSFRNAIGSLGYKGEYRGIFPIKVNQQQQVVEKIAQFGSHYHHGLEVG 152 Query: 59 SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKA 111 S E++ + E YKD E + + + +L+ ++ Sbjct: 153 SKAELIAAVSQLRDREACLVCNGYKDEEFIDLGLHAVRLGFMCIFVLEMPGELDLILERG 212 Query: 112 QKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLM 162 + L K + + +S D S G ++ + L Sbjct: 213 EALGVKPIIGVRAKLSVKAGGHWTDSGGERSTFGLTTSQIVDVVDRLKEKGMLDCFKLLH 272 Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207 +H + + I + ++ LGGG+ Sbjct: 273 YHLGSQVPNIRDIRAAVMEACRIYAGLVQEGAAMGFLDLGGGLAVDYDGSHTNFVSSRNY 332 Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251 D D + + ++ I E G A V + L +LD+ Sbjct: 333 TLDEYCADIVEAVMTTLDEQNIPHPHIVTESGRATVAYYSMLLFNILDV 381 >gi|115360046|ref|YP_777184.1| alanine racemase domain-containing protein [Burkholderia ambifaria AMMD] gi|115285334|gb|ABI90850.1| alanine racemase domain protein [Burkholderia ambifaria AMMD] Length = 376 Score = 43.6 bits (101), Expect = 0.049, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 48/172 (27%), Gaps = 11/172 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ NN+ GVK +K + D + G T S+L Sbjct: 6 LNTPAALIDVDRMRNNIARMQAHLDALGVKFRPHVKTTKCQQVVDAQIAAGAQGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V ++ I+ +++ N + Sbjct: 66 KEAEQFFAA-GVRDIVYAVGMIPAKLGQALALRRQGCDLKIVADSLETANAIAE--FGRE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + V RP L + + G++ H Sbjct: 123 HGERFDVWIEVDVDGHR--SGIRPDDALLIDVGRALVDGGMALGGVLAHAGS 172 >gi|83950233|ref|ZP_00958966.1| threonine aldolase, low-specificity [Roseovarius nubinhibens ISM] gi|83838132|gb|EAP77428.1| threonine aldolase, low-specificity [Roseovarius nubinhibens ISM] Length = 387 Score = 43.6 bits (101), Expect = 0.049, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 66/211 (31%), Gaps = 12/211 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59 I+TP ++D L N+ K+ G++ + K + + ++ G Sbjct: 27 IQTPCLVLDLDALERNIKKMGDYAKSHGMRHRVHGKMHKSVDVAKLQHELGGAVGVCCQK 86 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQKL 114 + E + + N +ID + + + + + + + AQK Sbjct: 87 VSEAEVFARGGIKDILVSNQVRDPAKIDRLAQLPKFGARVIVCVDDIDNVAELSEAAQKH 146 Query: 115 HKKIGLRINPSVSY--SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN--- 169 + + I + + ++ + S I+ G M H + Sbjct: 147 GTTLDIFIEIDCGAGRCGVVTTEAVIDIAKAVDAAPALRFSGIQAYQGAMQHIDSYEARK 206 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200 + AM+++ E +S GG Sbjct: 207 EKLDVAIAMVQDAVDGLKAEGLSCELVSGGG 237 >gi|125624499|ref|YP_001032982.1| alanine racemase [Lactococcus lactis subsp. cremoris MG1363] gi|20137246|sp|Q9RLU5|ALR_LACLM RecName: Full=Alanine racemase gi|16974088|emb|CAB56755.2| alanine racemase [Lactococcus lactis subsp. cremoris MG1363] gi|124493307|emb|CAL98277.1| Alr protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071289|gb|ADJ60689.1| alanine racemase [Lactococcus lactis subsp. cremoris NZ9000] Length = 367 Score = 43.6 bits (101), Expect = 0.050, Method: Composition-based stats. Identities = 22/184 (11%), Positives = 58/184 (31%), Gaps = 9/184 (4%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63 ++D + + NN++ N ++ A+K A + + ++ + G S+L E Sbjct: 12 IVDLKAIRNNIEKFKKHI-NPNAEIWPAVKADAYGHGSIEVSKAVSDLVGGFCVSNLDEA 70 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + ++D + ++ + L K Q+ + L+I+ Sbjct: 71 IELRNHLVTKPILVLSGIVPEDVDIAAALNISLTAPS---LEWLKLVVQEEAELSDLKIH 127 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 V + + + + DK + + F + + + Sbjct: 128 IGVDSGMGRIGIRDVEEANQMIELADKYAINFEGI-FTHFATADMADETKFKNQQARFNK 186 Query: 184 KEFG 187 G Sbjct: 187 IMAG 190 >gi|208779130|ref|ZP_03246476.1| alanine racemase [Francisella novicida FTG] gi|208744930|gb|EDZ91228.1| alanine racemase [Francisella novicida FTG] Length = 365 Score = 43.6 bits (101), Expect = 0.051, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVM 64 I Q L NN+ + K+ +K A + + + +D +++ E Sbjct: 6 ISVQTLRNNITIIKEYVGS--AKICFPVKANAYGHGLELIVEHSHDLVDFFAVANVLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + + + ID +LS I + + K + A+ +KK + +N Sbjct: 64 RVLDVVEKPVMIFG-VIEYNYIDRILSKNIRISIQDYNDIEKLEKFAKYYNKKPFVHVNI 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + ++ + + + ES+ + G+ H C + + K Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173 >gi|254481208|ref|ZP_05094453.1| alanine racemase [marine gamma proteobacterium HTCC2148] gi|214038371|gb|EEB79033.1| alanine racemase [marine gamma proteobacterium HTCC2148] Length = 360 Score = 43.6 bits (101), Expect = 0.052, Method: Composition-based stats. Identities = 35/331 (10%), Positives = 79/331 (23%), Gaps = 35/331 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF------AAWG-MFDTLNQYMDGTTSSSLY 61 +D L +NL A + K++ +K +F + + Sbjct: 9 LDLAALRHNLAHARQLAPE--CKVMCVVKANGYGHGALNVARVFAPMADALAVACIEEAI 66 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E+ ++ E+ ++ + L + L+ Sbjct: 67 ELR--DGGIETPILLLQGVFEAQELIIASQQNFWVMVDNRQHLYWLEQARLPAPVTCWLK 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I+ + L + ++ + V F + E + Sbjct: 125 IDTGM----HRLGVQPEEAAEFHQRLSSCENRTGELVTCTHFASADELDKPQTTEQLALF 180 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 + + G + + + Y S P + Sbjct: 181 ESITADLPGPR-SAANSSGLLGWPNSHYDWIRPG----YMLYGNSPFTATHPNTDTLHPV 235 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTGP-----YT 289 TL + V+ I + ++ + N P Sbjct: 236 MTLCSAVISIRNVASGESVGYAANWTAQRPSRIATVSIGYGDGYPRLAANGTPVLINGQR 295 Query: 290 AMVCGRSCLAGDIFGEFHF-EKPVKIGDRIS 319 A + GR + D+ VK+GD++ Sbjct: 296 APLAGRV--SMDMITVDITDLDDVKLGDQVI 324 >gi|294102773|ref|YP_003554631.1| alanine racemase domain protein [Aminobacterium colombiense DSM 12261] gi|293617753|gb|ADE57907.1| alanine racemase domain protein [Aminobacterium colombiense DSM 12261] Length = 377 Score = 43.2 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 57/210 (27%), Gaps = 12/210 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60 + TP L+D + N+ + AGV L +K + L G T + L Sbjct: 17 LDTPSLLVDLDVMERNISWMQQKAQRAGVNLRPHIKTHRTPDIAKKQLAAGAKGITVAKL 76 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + E A +A + T + V + K A+ + Sbjct: 77 GEGEVMAAEGIDDIFIANELAGDIKMDRLLALARKTTLAVGVDHPDHVKMLAETFDGESR 136 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG--------LMFHNNCENKS 171 + + E K + + G E +S Sbjct: 137 PM-EIMIDVDTGYHRTGVGSKEEILELAKLIRYRDSLKLRGIFTHDGNCYNATTISEVRS 195 Query: 172 FLCFSAMLKN-IEKEFGHFITQIEWISLGG 200 S + + + +E IS+G Sbjct: 196 ISQSSQNMMLEMAEFLRKEGIGVEEISIGS 225 >gi|288941546|ref|YP_003443786.1| alanine racemase [Allochromatium vinosum DSM 180] gi|288896918|gb|ADC62754.1| alanine racemase [Allochromatium vinosum DSM 180] Length = 367 Score = 43.2 bits (100), Expect = 0.059, Method: Composition-based stats. Identities = 23/210 (10%), Positives = 49/210 (23%), Gaps = 11/210 (5%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEVM 64 I + +N A + + + +K A A + TL DG + + E + Sbjct: 12 IHLDAIRHNYRRAKSLAPRSRALAV--VKANAYGHGAIAVARTLADEADGFAVACVEEAL 69 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 E E + A++ + + H L Sbjct: 70 ELRESGIQEPMLLLEGVFSPDEIALVERAGLAMVV--HCREQLDWV-LNAHPSRRLDCWI 126 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184 + + F+ + + + V F E SA ++ E+ Sbjct: 127 KLDTGMHRVGFSLSEFAEVNARLA-ACPHVGERVAMTHFARADEIDHP-YTSAQIEAFEQ 184 Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDF 214 + + Sbjct: 185 ALNGARIGRSLANSAAVFAWPQAHGDWTRP 214 >gi|170697287|ref|ZP_02888381.1| alanine racemase domain protein [Burkholderia ambifaria IOP40-10] gi|170137907|gb|EDT06141.1| alanine racemase domain protein [Burkholderia ambifaria IOP40-10] Length = 376 Score = 43.2 bits (100), Expect = 0.061, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 79/322 (24%), Gaps = 31/322 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP LID ++ NN+ GV+ +K + D G T S+L Sbjct: 6 LNTPAALIDVDRMRNNIARMQAHLDALGVRFRPHVKTTKCQHVVDAQIAGGAQGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V ++ I+ ++V N + Sbjct: 66 KEAEQFFAA-GVRDIVYAVGMIPAKLGQALALRRQGCDLKIVADSVETANAIAE--FGRE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF--- 172 + + P P L + + G++ H + Sbjct: 123 HGERFDVWIEIDVDGHRSGIP--PDDGLLIDVGRALVDGGMALGGVLAHAGSSYEYDMRD 180 Query: 173 ------LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + + +S+G + + + Sbjct: 181 ALVAIAEQERSRTVHAAERLRAAGLPCPVVSIG-STPTALSATNLDGVTEVRAGVYVLFD 239 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 + ++ A+ ++ TTV+ E + D S Sbjct: 240 LVMHNIGVCALADIALSVLTTVIGHQEEKGWA----------IVDAGWMAMSRDRGTQRQ 289 Query: 287 PYTAMVCGRSCLAGDIFGEFHF 308 GD+ GE+ Sbjct: 290 ARDFGYGQVCTEDGDVLGEYVM 311 >gi|302188653|ref|ZP_07265326.1| alanine racemase, N-terminal [Pseudomonas syringae pv. syringae 642] Length = 378 Score = 43.2 bits (100), Expect = 0.062, Method: Composition-based stats. Identities = 21/171 (12%), Positives = 46/171 (26%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ +N+ GV+L +K + + G T S+L Sbjct: 8 LDTPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A + + C I+ ++V+ Sbjct: 68 KEAEHCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVAAARAI--VVFGQAH 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + + G+M H Sbjct: 126 DERFDVWIEIDCDGHRSGLTV--DDPSLIEVARTLVDGGMQLRGVMTHAGS 174 >gi|146340130|ref|YP_001205178.1| putative amino acid processing-like protein [Bradyrhizobium sp. ORS278] gi|146192936|emb|CAL76943.1| putative amino acid processing enzyme-related protein (aldolase or racemase) [Bradyrhizobium sp. ORS278] Length = 359 Score = 43.2 bits (100), Expect = 0.062, Method: Composition-based stats. Identities = 27/256 (10%), Positives = 62/256 (24%), Gaps = 26/256 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61 TP +ID K+ N+ AGV +K + + + G T + Sbjct: 14 GTPCAVIDMDKVERNIARIQAQCAAAGVANRPHIKTHKSPVLAKLQIEAGAQGITCQKIG 73 Query: 62 EVM-LGHEKFGGETHAYNVAYKDCEIDAV---LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E + +YN+ ++ T+ + + + A++ + Sbjct: 74 EAEIMADAGINNILISYNLIGEEKMARLAALQAKADMTVAADNATVIAGLPQAAKQSGRT 133 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + + + + + SE G M + E+ Sbjct: 134 LSVVVECD----TGRKRAGVETPAEAIQLARQIKASEGLRFAGFMLY-PTESGWDDAQRF 188 Query: 178 MLKNIEKEFGHFITQIEWISLGGG---------------IHFTDKDYPVKDFCQRLKEFS 222 + + + +S GG T + + Sbjct: 189 YDEALAGVRAE-GLEASIVSTGGSPNLKNIGKLKGATEHRPGTYIYNDRMQVAAGVATWD 247 Query: 223 EKYSVQIYLEPGEAIV 238 + A Sbjct: 248 DCALHIYSTVVSRAAP 263 >gi|320328125|gb|EFW84130.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 378 Score = 43.2 bits (100), Expect = 0.064, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 48/171 (28%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ N+ + GV+L +K + + G T S+L Sbjct: 8 LDTPVALLDVPRMQRNIQRMQHRINELGVRLRPHVKTSKCLPVIQAQIAADASGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A D + + C I+ ++V A Sbjct: 68 KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQRH 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + ++ G+M H Sbjct: 126 DENFDVWIEIDCDGHR--SGLTIDDPSLVEVARTLIEGGMHLRGVMTHAGS 174 >gi|148255000|ref|YP_001239585.1| putative amino acid processing enzyme-like protein [Bradyrhizobium sp. BTAi1] gi|146407173|gb|ABQ35679.1| putative amino acid processing enzyme-related protein (aldolase or racemase) [Bradyrhizobium sp. BTAi1] Length = 359 Score = 43.2 bits (100), Expect = 0.068, Method: Composition-based stats. Identities = 26/256 (10%), Positives = 60/256 (23%), Gaps = 26/256 (10%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLY 61 TP +ID ++ N+ AGV +K + + + G T + Sbjct: 14 GTPCAVIDMDRVERNIARIQAQCAAAGVANRPHIKTHKSPELAKLQIAAGAQGITCQKIG 73 Query: 62 EVM-LGHEKFGGETHAYNVAYKDCEIDAV---LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 E + +YN+ ++ T+ + + + A++ + Sbjct: 74 EAEIMAEAGIDNVLISYNLIGEEKMARLAALQAKADMTVAADNPVVVAGLPEAAKQSGRT 133 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + + + + + SE G M + E Sbjct: 134 LSVVVECD----TGRKRAGVETPAEAIQLARQIKVSEGLRFAGFMLY-PTETGWDEAQRF 188 Query: 178 MLKNIEKEFGHFITQIEWISLGGG---------------IHFTDKDYPVKDFCQRLKEFS 222 + + +S GG T + + Sbjct: 189 FDEALAGVRAE-GLDAAIVSTGGSPNLKNLGKLKGATEHRPGTYIYNDRMQVAAGVATWD 247 Query: 223 EKYSVQIYLEPGEAIV 238 + A Sbjct: 248 DCALHIYSTVVSRAAP 263 >gi|89055095|ref|YP_510546.1| D-3-hydroxyaspartate aldolase [Jannaschia sp. CCS1] gi|88864644|gb|ABD55521.1| D-3-hydroxyaspartate aldolase [Jannaschia sp. CCS1] Length = 387 Score = 43.2 bits (100), Expect = 0.069, Method: Composition-based stats. Identities = 26/229 (11%), Positives = 63/229 (27%), Gaps = 10/229 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59 I+TP ++D L N+ + G++ + K + + + G Sbjct: 27 IQTPCLVLDLDALERNIKKMGDYAREHGMRHRVHGKMHKSVDVAKLQEELGGACGVCCQK 86 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQKL 114 + E + + N +ID + + + + A K Sbjct: 87 VSEAEVFARGGIKDVMVSNQVTDPQKIDRLARMPKFGARVLCCVDDPANVADLSAAAVKH 146 Query: 115 HKKIGLRINPSVSY--SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 +I + +++ + + + I+ G M H + ++ Sbjct: 147 GTQIEALVEIDCGAGRCGVTTTQEVVNIAKMIDAAEGLKFAGIQAYQGAMQHLDSYDERA 206 Query: 173 LCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 + +E +E +GGG + L+ Sbjct: 207 SKTQVAIDMVEDAIAGLKANGLECDIVGGGGTGSYYFESNSGAFNELQC 255 >gi|309779212|ref|ZP_07673975.1| alanine racemase, N- domain protein [Ralstonia sp. 5_7_47FAA] gi|308922016|gb|EFP67650.1| alanine racemase, N- domain protein [Ralstonia sp. 5_7_47FAA] Length = 382 Score = 43.2 bits (100), Expect = 0.070, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 52/172 (30%), Gaps = 11/172 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 I TP LID ++ +N+ + GVK +K + G T S+L Sbjct: 11 IDTPAALIDLPRMQHNIARMQHRMNALGVKFRPHVKTTKCLDVVRAQVAAGAQGITVSTL 70 Query: 61 YEVMLGHEKFGGETHAYNVA----YKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLH 115 E G + Y V + CD ++ + + D A+ Sbjct: 71 KEAE-AFFAAGIKDILYAVGIVATKLPRAMALRKRGCDLKLVVDNAEAAHAVVDYARAHG 129 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + V + L +++ +V+G+M H Sbjct: 130 --ERCEVWIEVDTDGHRSGITPEQDALLEVG--RILKNGGIDVSGVMTHAGS 177 >gi|158422357|ref|YP_001523649.1| putative amino acid aldolase [Azorhizobium caulinodans ORS 571] gi|158329246|dbj|BAF86731.1| putative amino acid aldolase [Azorhizobium caulinodans ORS 571] Length = 369 Score = 43.2 bits (100), Expect = 0.070, Method: Composition-based stats. Identities = 24/200 (12%), Positives = 51/200 (25%), Gaps = 3/200 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL- 60 + TP ++D NLDT + K G KL K + + Q Sbjct: 16 VDTPALILDLDAFEANLDTMAALLKPTGAKLRAHAKTHKSAVIARLQMQRGAVGQCVQKV 75 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E + + N + ++ + + + + + G+ Sbjct: 76 GEAEALAQAGINDILVSNEVVEPRKLKRLAALSSIARVQLCADDPAAIPPIEAAAEAAGI 135 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN--KSFLCFSAM 178 R++ V P + E S+ GL + + Sbjct: 136 RLSVLVEIEVGAKRCGLEPGAPAAELAARIAGSKHLTFGGLQAYYGSAQHKRQPEERRQA 195 Query: 179 LKNIEKEFGHFITQIEWISL 198 + + ++ L Sbjct: 196 IAFAAGCVEQTLDALKTRGL 215 >gi|319956784|ref|YP_004168047.1| arginine decarboxylase [Nitratifractor salsuginis DSM 16511] gi|319419188|gb|ADV46298.1| arginine decarboxylase [Nitratifractor salsuginis DSM 16511] Length = 622 Score = 43.2 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 77/303 (25%), Gaps = 50/303 (16%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P L + +DT + A + LK ++L + Sbjct: 47 PLLLRFPHLIRKQIDTLFGAFERARREFKYSGKFHAVFPLKVNQYPNFVESLIEVSGRRR 106 Query: 54 -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-- 110 G + S E+++ K +KD E+ A+ N + + Sbjct: 107 YGLEAGSKAELIIAMAKTPLGAPITVNGFKDKEMIALAFIAAKSGHNITLTIEGINELET 166 Query: 111 -----------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--- 156 A S I A S+ G + +E+ Sbjct: 167 IIEVHRECNRDASAPITPKIGMRIRLHSTGVGIWAKSGGYSSKFGLTSTELLEAYEMLRQ 226 Query: 157 -----NVNGLMFHN---NCENKSFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDK 207 ++ + FH E NI E + + I++GGG+ Sbjct: 227 EDLIGSLAMIHFHIGSQMSEIGPLKKALREAGNIYAELKRRGAENLHAINIGGGLAVEYS 286 Query: 208 DY-------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254 + V Q + I+ E G I L VL++ Sbjct: 287 QHQPSRNYSIKEFANDVVFAMQEIARQKGVEEPDIFTESGRFIAAPHAVLVAPVLELFSQ 346 Query: 255 IKN 257 + Sbjct: 347 EYH 349 >gi|291557577|emb|CBL34694.1| alanine racemase [Eubacterium siraeum V10Sc8a] Length = 379 Score = 43.2 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 84/326 (25%), Gaps = 19/326 (5%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSS-LYEV 63 ID L +N + + K + + +K A + L + S L+E Sbjct: 12 IDLDALEHNYNEIKKLAKGKDILAV--VKANAYGHDDKAVCLKLQELGVKYYGVSNLWEG 69 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + T + D +L T +V + D A K+ + I Sbjct: 70 EKLRQHGITGTILTFGYTDEDYFDELLEYGITQTAGSVQYAKQLSDYAVSKGVKLPVHIK 129 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + ++ + L D + ++ + + + Sbjct: 130 VNTGMTRVGIDSQQEMLDILAMPGLDCKAAY----THFAAADSLDPSDVEYTDRQQEKLM 185 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 K I + GG I+ D + L Y +++ + + + Sbjct: 186 KIAKDKGLFIHSQNSGGIIYHGDFGGDIVRAGVILYGHYPNYPLEVPFDMKSVMTVKSVV 245 Query: 244 LNTTVL--DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-----YTAMVCGRS 296 + + + + V + + G V GR Sbjct: 246 SQLKTIPAGTQISYGRTYTAEKEMTVAVIPIGYADGYFRDFSSKGKMLINGVLCNVVGRV 305 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFED 322 C+ + +K GD + Sbjct: 306 CMDQ-TIVDVSNVPDIKTGDIVYVYS 330 >gi|315453395|ref|YP_004073665.1| biosynthetic arginine decarboxylase [Helicobacter felis ATCC 49179] gi|315132447|emb|CBY83075.1| biosynthetic arginine decarboxylase [Helicobacter felis ATCC 49179] Length = 626 Score = 42.8 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 86/306 (28%), Gaps = 55/306 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLN-----Q 50 P L + ++ + A K + LK + + + Sbjct: 46 PLLLRFPHLISKQVNKLFNMFSQAIEQYHYSGAFKAVFPLKVNHMPHFVLPLVEISKRFK 105 Query: 51 YMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 G + S E++L +KD E+ + ++ + + + Sbjct: 106 GCYGLEAGSKAELILAMSYVQEGAPITVNGFKDREMIELGFIAASMGADITLTIEGLNEL 165 Query: 111 -------------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI------ 151 + KL KIG+R+ S + A ++ G + + Sbjct: 166 KTILEVARARGIGSNKLCPKIGIRVRLHSSGVG-MWAKSTGIHAKFGLASTELLEAMRLL 224 Query: 152 --ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFT 205 + + + + FH + LK + ++ +++GGG+ Sbjct: 225 EDHALLAQLRMIHFHIGSQISDITPLKKALKEAGNIYAELRKMGAFNLDSVNIGGGLAIE 284 Query: 206 DKDY---------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD 250 + V + + + ++ I++E G I L VL+ Sbjct: 285 YAQHKHQCERNYTLEEFAGDVVFLLKEIVKHKQELEPNIFIESGRFISATHAVLVAPVLE 344 Query: 251 ISENIK 256 + Sbjct: 345 LFSQDY 350 >gi|330986553|gb|EGH84656.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 378 Score = 42.8 bits (99), Expect = 0.077, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 47/171 (27%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ N+ + GV+L +K + + G S+L Sbjct: 8 LDTPVALLDVPRMQRNIQRMQHRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVAVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A D + + C I+ ++V A Sbjct: 68 KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQRH 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + ++ G+M H Sbjct: 126 DENFDVWIEIDCDGHRSGLTV--DDPSLVEVARTLIEGGMHLRGVMTHAGS 174 >gi|254255433|ref|ZP_04948749.1| hypothetical protein BDAG_04773 [Burkholderia dolosa AUO158] gi|124901170|gb|EAY71920.1| hypothetical protein BDAG_04773 [Burkholderia dolosa AUO158] Length = 398 Score = 42.8 bits (99), Expect = 0.078, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 76/318 (23%), Gaps = 23/318 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ N++ GV+ +K + D + G T S+L Sbjct: 28 LNTPAALIDVARMNRNIERMQQRMNALGVRFRPHVKTTKCTQVVDAQMKAGARGITVSTL 87 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V + I+ ++V+ + A Sbjct: 88 KEAERFFAG-GIRDIVYAVGIAPSKLPQALALRRQGCDLKIVADSVACADAI--VAFGRE 144 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 + + L + + + Sbjct: 145 HAERFDVWIEIDVDGHRSGIAPDGDRLLPV----ATTLVNGGMQLGGVIAHAGSSYDYDT 200 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 L I ++ + G+ +E + G Sbjct: 201 HDELVRIAEQERAGCVRAAERIRAAGLPCDVVSIGSTPTA----LAAEHLEGVTEVRAGV 256 Query: 236 AIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291 ++ + N V D SE ++ S + D S Sbjct: 257 YVMFDLVMHNVGVSDTSEIALSVLTTVIGHQSDKGWAIVDAGWMAMSRDRGTQRQKRDFG 316 Query: 292 VCGRSC-LAGDIFGEFHF 308 G C GD+ G++ Sbjct: 317 -YGLVCAENGDVLGDYLL 333 >gi|146305685|ref|YP_001186150.1| alanine racemase [Pseudomonas mendocina ymp] gi|145573886|gb|ABP83418.1| alanine racemase [Pseudomonas mendocina ymp] Length = 358 Score = 42.8 bits (99), Expect = 0.080, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 44/145 (30%), Gaps = 9/145 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFAA----WGMFDTLNQYMDGTTSSSLYE 62 ++D + +N A A+ K A + L++ DG +SL E Sbjct: 7 IVDLSAIAHNYAVAKRCAPGRQA---FAVVKANAYGHGVREVVTALHEVADGFAVASLEE 63 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLR 121 G + A+ + ++ + +Q + + L+ Sbjct: 64 AAEVRAMHGEARILLLEGCFEASEYAIAAQLGLDLVVQSAAQADALLACEPARPLNVWLK 123 Query: 122 INPSVSYSKFILADPNRPFSRLGEK 146 ++ + F A + +RL Sbjct: 124 LDSGMHRLGFDAASLRQWHARLEMA 148 >gi|167750416|ref|ZP_02422543.1| hypothetical protein EUBSIR_01390 [Eubacterium siraeum DSM 15702] gi|167656567|gb|EDS00697.1| hypothetical protein EUBSIR_01390 [Eubacterium siraeum DSM 15702] Length = 379 Score = 42.8 bits (99), Expect = 0.080, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 83/328 (25%), Gaps = 23/328 (7%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSS---LY 61 ID L +N + + K + + +K A + L + S Sbjct: 12 IDLDALEHNYNEIKKLAKGKDILAV--VKANAYGHDDKAVCLKLQELGVKYYGVSNLWEG 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + H G + +D + + +V + D A K+ + Sbjct: 70 EKLRCH-GITGTILTFGYTDEDYFDELLEYGITQ-TAGSVQYAKQLSDYAVSKGVKLPVH 127 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 I + ++ + L D + ++ + + Sbjct: 128 IKVNTGMTRVGIDSQQEMLDILAMPGLDCKAAY----THFAAADSLDPSDVEYTDRQQEK 183 Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 + K I + GG I+ D + L Y +++ + + + Sbjct: 184 LMKIAKDKGLLIHSQNSGGIIYHGDFGGDIVRAGVILYGHYPNYPLEVPFDMKSVMTVKS 243 Query: 242 TTLNTTVL--DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-----YTAMVCG 294 + + + + V + + G V G Sbjct: 244 VVSQLKTIPAGTQISYGRTYTAEKEMTVAVIPIGYADGYFRDFSSKGKMLINGVLCNVVG 303 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFED 322 R C+ + +K GD + Sbjct: 304 RVCMDQ-TIVDVSNVPDIKTGDIVYVYS 330 >gi|168704641|ref|ZP_02736918.1| alanine racemase domain protein [Gemmata obscuriglobus UQM 2246] Length = 366 Score = 42.8 bits (99), Expect = 0.082, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 2/71 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60 + TP L+D + N+ + GV++ + K G+ + DG ++ L Sbjct: 18 LDTPQLLVDLDVVDGNVRRMFAAARGRGVRVRVHFKSLKCTGLARHVAAAGPDGFAAAKL 77 Query: 61 YEVM-LGHEKF 70 E L Sbjct: 78 NEAEALADAGV 88 >gi|94313121|ref|YP_586330.1| amino acid processing enzyme (aldolase or racemase) [Cupriavidus metallidurans CH34] gi|93356973|gb|ABF11061.1| amino acid processing enzyme (aldolase or racemase) [Cupriavidus metallidurans CH34] Length = 382 Score = 42.8 bits (99), Expect = 0.082, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 22/78 (28%), Gaps = 2/78 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 I TP ++D N+ AGVKL K + + Q G + Sbjct: 20 IDTPSLVVDLDVFARNISRMQAAADAAGVKLRPHAKAHKCPDVSVAQIAQGAVGICCQKV 79 Query: 61 YEVM-LGHEKFGGETHAY 77 E + + Sbjct: 80 SEAVPFARAGIHDIHISN 97 >gi|229083912|ref|ZP_04216217.1| hypothetical protein bcere0022_5660 [Bacillus cereus Rock3-44] gi|228699393|gb|EEL52073.1| hypothetical protein bcere0022_5660 [Bacillus cereus Rock3-44] Length = 390 Score = 42.8 bits (99), Expect = 0.083, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 62/171 (36%), Gaps = 15/171 (8%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL---NQYMDGTTSSSLY 61 P +D++ L N+ + + + V++ A K + + + ++ G S Sbjct: 12 PCAFLDEEALERNIQSIVQLCGRKKVRI--ASKSLRSVSVMKKILDTDRCFQGIMCFSPR 69 Query: 62 EVM-LGHEKFGGETHAYN----VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E + L + F Y A ++ + T + + V ++ + A ++ Sbjct: 70 EALFLVKQGFDDLLLGYPAYDQQALQEISLLTKQGLTITCMVDCVEHIDYLEKIAMEVDG 129 Query: 117 KIGLRINPSVSYSKFILADPNRPFSR-----LGEKCKDKIESEIKNVNGLM 162 + I+ +S F L R + + I+S + ++G+M Sbjct: 130 CFRICIDIDMSSQFFQLHFGVRRSPIRTATEILMVIEKIIQSPVLQIDGVM 180 >gi|319794305|ref|YP_004155945.1| alanine racemase domain protein [Variovorax paradoxus EPS] gi|315596768|gb|ADU37834.1| alanine racemase domain protein [Variovorax paradoxus EPS] Length = 380 Score = 42.8 bits (99), Expect = 0.084, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 44/133 (33%), Gaps = 8/133 (6%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSS 59 ++ TP LID + N++ K G+ L +K + + + G + + Sbjct: 20 LLDTPALLIDLPAMTRNIERMAAFAKARGIGLRPHVKTHKSIEIARRQVAAGAIGVSCVT 79 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEI-------DAVLSNCDTIIFNTVSQLNKFKDKAQ 112 + E + + + A +I + ++ + ++ + A Sbjct: 80 VGEAEIMVDGGIRSVLITSPAVTPSKIARLVKLAERAAPGGVMVVADNLTNVADLARAAS 139 Query: 113 KLHKKIGLRINPS 125 L + + ++ Sbjct: 140 GLLHPLPVLVDYG 152 >gi|152975352|ref|YP_001374869.1| alanine racemase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024104|gb|ABS21874.1| alanine racemase [Bacillus cytotoxicus NVH 391-98] Length = 392 Score = 42.8 bits (99), Expect = 0.087, Method: Composition-based stats. Identities = 29/335 (8%), Positives = 83/335 (24%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM----DGTTSSSL 60 ++ + +N+ N + ++ A+K A A + + Sbjct: 13 VNLDAIKHNVKEFKKRIHNENITMMAAVKANAYGHGAVEVAKAATEAGVQQLAVAFVDEG 72 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y + +S + A++L K + Sbjct: 73 IELREAGVTVPILVLGYTPVEAAQDAIEYDIMMTVYRIEELSS---INEIAKQLQTKARV 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC----ENKSFLCFS 176 + ++ + K+ + V G+ H + + + Sbjct: 130 HVKID-----TGMSRIGLQEEEVAPFLKELQKMNHIEVEGMYTHYSTADELDKTYTNMQT 184 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 + + I +I + ++ + + + + Sbjct: 185 KLFEKAVNTAKELGMPIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSREVDHTVVS 244 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 245 LQPALSLKSKVAHIKRAKKNRGVSYGNTYMTTGEEWIATVPIGYADGYNRQLSNKGHALI 304 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 305 NGIRVPVLGRVCMDQ-LMLDVTKAMPVRVGDEVVF 338 >gi|152992949|ref|YP_001358670.1| arginine decarboxylase [Sulfurovum sp. NBC37-1] gi|151424810|dbj|BAF72313.1| arginine decarboxylase [Sulfurovum sp. NBC37-1] Length = 626 Score = 42.8 bits (99), Expect = 0.087, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 78/305 (25%), Gaps = 52/305 (17%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52 P L + + T + A + LK L QY Sbjct: 46 PLLLRFPHLIKKQISTLFSTFEEAKKEFGYQGNFHAVFPLKVNQFPNFIHALIDVSQQYD 105 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ--------- 103 G + S E+++ K +KD E+ ++ + N Sbjct: 106 YGLEAGSKAELIIAITKTPLGAPITVNGFKDKEMISLCFIAAKMGHNITVTIEGLGELET 165 Query: 104 ----LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--- 156 +F + S I A S+ G + +E+ Sbjct: 166 IIEVNEEFNKGSDTPVSPKIGVRIRLHSSGIGIWAKSGGYTSKFGLTSTELLEAYGMLKQ 225 Query: 157 -----NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDK 207 + + FH + L+ + + + I++GGG+ Sbjct: 226 HKLLDRLWMIHFHIGSQMGDIAPLKKALREAGNIYAELKRRGADSLTAINIGGGLAVEYS 285 Query: 208 DY---------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252 + V Q + + I+ E G I + + L VL++ Sbjct: 286 QHGSSIERNYSLREFANDVVYLMQEIAKRKGVAEPDIFTESGRYIAASHSVLIAPVLELF 345 Query: 253 ENIKN 257 + Sbjct: 346 SQEYH 350 Score = 42.8 bits (99), Expect = 0.089, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 27/99 (27%), Gaps = 14/99 (14%) Query: 269 VPDYLLYQESATI-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEK----PVKIGD--- 316 +PD+ + + T A + +C + G + +G Sbjct: 454 LPDFWGLAQHFPVMPLDRLNTTPTNPASIWDITCDSDGEMGFNRELPLYLHDIDVGKEEY 513 Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVK--NVDGTIKA 353 ++F Y N PT V N DG Sbjct: 514 FLAFFLTGAYQEVLGMQHNLFTHPTECVINFNEDGGYHI 552 >gi|116511664|ref|YP_808880.1| alanine racemase [Lactococcus lactis subsp. cremoris SK11] gi|123125695|sp|Q030B4|ALR_LACLS RecName: Full=Alanine racemase gi|116107318|gb|ABJ72458.1| alanine racemase [Lactococcus lactis subsp. cremoris SK11] Length = 367 Score = 42.8 bits (99), Expect = 0.089, Method: Composition-based stats. Identities = 22/184 (11%), Positives = 58/184 (31%), Gaps = 9/184 (4%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63 ++D + + NN++ N ++ A+K A + + ++ + G S+L E Sbjct: 12 IVDLKAIRNNIEKFKKHI-NPNAEIWPAVKADAYGHGSVEVSKAVSDLVGGFCVSNLDEA 70 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + ++D + ++ + L K Q+ + L+I+ Sbjct: 71 IELRNHLVTKPILVLSGIVPEDVDIAAALNISLTAPS---LEWLKLVVQEEAELSDLKIH 127 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 V + + + + DK + + F + + + Sbjct: 128 IGVDSGMGRIGIRDVEEANQMIELADKYAINFEGI-FTHFATADMADETKFKNQQARFNK 186 Query: 184 KEFG 187 G Sbjct: 187 IMAG 190 >gi|298244439|ref|ZP_06968245.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963] gi|297551920|gb|EFH85785.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963] Length = 370 Score = 42.8 bits (99), Expect = 0.093, Method: Composition-based stats. Identities = 28/212 (13%), Positives = 59/212 (27%), Gaps = 15/212 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTS---S 58 + TP ++D + N+D + + + + LK + + L Sbjct: 13 LDTPSMIVDLTLMEENIDRLMQRFREKKIHVRPHLKTVKSPELARRLLAAGAVGGCVAKV 72 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT----IIFNTVSQLNKFKDKAQKL 114 S EVM E + K V ++ ++ + + Sbjct: 73 SEAEVM-AQEGIDDLLITTEIVGKPKLSRLVTLIQHHPRIKVVIDSFIGAQELNTALHEA 131 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN-NCENKSFL 173 +I + I+ +V ++ P + L C + V G H + + Sbjct: 132 QLEIDVLIDLNVGQNRC-GVLPGKEALTLAHYCSKLPHLHLVGVQGYEGHLQHIHSPEER 190 Query: 174 CFSAMLKNI-----EKEFGHFITQIEWISLGG 200 + IE ++ GG Sbjct: 191 TQRCHQAMRLLTETAAQLRFEGFPIEVVTTGG 222 >gi|149187270|ref|ZP_01865568.1| arginine decarboxylase [Vibrio shilonii AK1] gi|148838806|gb|EDL55745.1| arginine decarboxylase [Vibrio shilonii AK1] Length = 636 Score = 42.8 bits (99), Expect = 0.095, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 83/325 (25%), Gaps = 51/325 (15%) Query: 5 PYYLIDKQKLLNN----LDTALYIRKNAGV----KLLLALKCFAAWGMF-DTLNQYM--- 52 P + Q + D + G L+ +K + L Sbjct: 61 PALVRFPQIIHQRVHGICDAFNQAINDYGYNNEYLLVYPIKVNQQKDVVEQILASQAEAE 120 Query: 53 ---DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E+M L + N + L + I+ +S Sbjct: 121 TKQLGLEAGSKPELMAVLAMAQRASSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLS 180 Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153 +L+ +A+ L+ K + + ++ + + G ++ Sbjct: 181 ELDIVLKEAKALNVKPRVGLRIRLASQGAGKWQASGGEKSKFGLSASQVLQVVERLKAED 240 Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210 +++ + + FH + + E I + +GGG+ Sbjct: 241 QLEMLQLVHFHLGSQMANIRDVRNGVNEAARFYCELRKMSVPIAYFDVGGGLAVDYDGTR 300 Query: 211 VKDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253 + + E+ + I E G ++ + L T V+ Sbjct: 301 SQSSSSMNYGLAEYARNIVSTVGDVCALYEESAPVIISESGRSLTAHHAVLITNVIGTES 360 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQES 278 V S + + Sbjct: 361 YNVETVDAPSEDAPLLLQNMWQNWQ 385 >gi|56707576|ref|YP_169472.1| putative arginine decarboxylase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670047|ref|YP_666604.1| putative arginine decarboxylase [Francisella tularensis subsp. tularensis FSC198] gi|224456646|ref|ZP_03665119.1| putative arginine decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370096|ref|ZP_04986102.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874397|ref|ZP_05247107.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604068|emb|CAG45065.1| putative arginine decarboxylase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320380|emb|CAL08448.1| putative arginine decarboxylase [Francisella tularensis subsp. tularensis FSC198] gi|151568340|gb|EDN33994.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254840396|gb|EET18832.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282158733|gb|ADA78124.1| putative arginine decarboxylase [Francisella tularensis subsp. tularensis NE061598] Length = 469 Score = 42.8 bits (99), Expect = 0.096, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 62/235 (26%), Gaps = 25/235 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG-- 54 P L + L N LD A L +K + + Y Sbjct: 52 PLVLYFEHILKNQLDKLYTSFGKAIDDFSYTCKYSLAYPIKVNPEQKIIKAIYDYHQHNQ 111 Query: 55 ----TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 + E + +KD + I + + + + Sbjct: 112 VSLDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEI 171 Query: 111 AQK---LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLM 162 L + ++ + + F + F + + I N + L Sbjct: 172 NIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQKFGLSLSQINECINFLKTNQLQQKLLLLH 231 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214 H + KS A ++ + + + +E+I GGG+ +Y + Sbjct: 232 SHIGSQIKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGGLAVNYDEYDRPSY 286 >gi|306832114|ref|ZP_07465268.1| alanine racemase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425553|gb|EFM28671.1| alanine racemase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 368 Score = 42.4 bits (98), Expect = 0.096, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 7/99 (7%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+D K A+ K A A + ++ +DG S++ E Sbjct: 12 VIDLDAICQNIDAVK--ANIPQDKKAFAVVKANAYGHGATSVAQAIHHLVDGFCVSNIDE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTV 101 + E ET E+ T+ + Sbjct: 70 ALELREAGIEETILILGVIMPDEVALARDYHVTLTVASQ 108 >gi|288906075|ref|YP_003431297.1| alanine racemase [Streptococcus gallolyticus UCN34] gi|288732801|emb|CBI14377.1| Putative alanine racemase [Streptococcus gallolyticus UCN34] Length = 368 Score = 42.4 bits (98), Expect = 0.096, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 7/99 (7%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+D K A+ K A A + ++ +DG S++ E Sbjct: 12 VIDLDAICQNIDAVK--ANIPQDKKAFAVVKANAYGHGATSVAQAIHHLVDGFCVSNIDE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTV 101 + E ET E+ T+ + Sbjct: 70 ALELREAGIEETILILGVIMPDEVALARDYHVTLTVASQ 108 >gi|148657962|ref|YP_001278167.1| alanine racemase domain-containing protein [Roseiflexus sp. RS-1] gi|148570072|gb|ABQ92217.1| alanine racemase domain protein [Roseiflexus sp. RS-1] Length = 349 Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats. Identities = 26/213 (12%), Positives = 54/213 (25%), Gaps = 14/213 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP +ID +L N+ G+ +K + + G T L Sbjct: 6 LDTPVAIIDLDRLERNIARFQTYLSQHGIANRPHIKTHKIPQIARMQMAAGAVGITCQKL 65 Query: 61 YEVM-LGHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E + YN A + ++ ++V+ + + Sbjct: 66 GEAEVMADAGIDDIFIPYNIIGAAKLERLTALARRVRLSVAADSVAVITGLGNAMAGTGL 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 ++ + + R + + + I GL F S Sbjct: 126 ELTVLVECDTG--------MGRCGVQTPAEAVELA-LLITRTPGLRFGGLMTYPSSPEIG 176 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY 209 + + +E +S GG Sbjct: 177 PFMHEAVRLLRDRGIAVERVSGGGTAGMWRAHE 209 >gi|331015908|gb|EGH95964.1| hypothetical protein PLA106_07905 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 378 Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 51/171 (29%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ N+ GV+L +K + + + G T S+L Sbjct: 8 LDTPVALLDMPRMQRNIQRMQQRMNELGVRLRPHVKTSKSLPVIQAQMAAGARGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A D + C I+ ++V A Sbjct: 68 KEAEHCFAEGISDVFYAVAIAPGKLDQALKLRRIGCRLSILTDSVVAAQAI--VAFGQQH 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 ++ + + + L E + + + G+M H Sbjct: 126 DEQFQVWIEIDCDGHR-SGLTVEDNALIEVARTLV-EGGMQLRGVMTHAGS 174 >gi|213968918|ref|ZP_03397058.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|213926217|gb|EEB59772.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 378 Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 51/171 (29%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ N+ GV+L +K + + + G T S+L Sbjct: 8 LDTPVALLDMPRMQRNIQRMQQRMNELGVRLRPHVKTSKSLPVIQAQMAAGARGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A D + C I+ ++V A Sbjct: 68 KEAEHCFAEGISDVFYAVAIAPGKLDQALKLRRIGCRLSILTDSVVAAQAI--VAFGQQH 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 ++ + + + L E + + + G+M H Sbjct: 126 DEQFQVWIEIDCDGHR-SGLTVEDNALIEVARTLV-EGGMQLRGVMTHAGS 174 >gi|28870797|ref|NP_793416.1| hypothetical protein PSPTO_3640 [Pseudomonas syringae pv. tomato str. DC3000] gi|28854046|gb|AAO57111.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 378 Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 51/171 (29%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ N+ GV+L +K + + + G T S+L Sbjct: 8 LDTPVALLDMPRMQRNIQRMQQRMNELGVRLRPHVKTSKSLPVIQAQMAAGARGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A D + C I+ ++V A Sbjct: 68 KEAEHCFAEGISDVFYAVAIAPGKLDQALKLRRIGCRLSILTDSVVAAQAI--VAFGQQH 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 ++ + + + L E + + + G+M H Sbjct: 126 DEQFQVWIEIDCDGHR-SGLTVEDNALIEVARTLV-EGGMQLRGVMTHAGS 174 >gi|15672826|ref|NP_267000.1| alanine racemase [Lactococcus lactis subsp. lactis Il1403] gi|281491333|ref|YP_003353313.1| alanine racemase [Lactococcus lactis subsp. lactis KF147] gi|20137230|sp|Q9CH94|ALR_LACLA RecName: Full=Alanine racemase gi|12723770|gb|AAK04942.1|AE006318_5 alanine racemase [Lactococcus lactis subsp. lactis Il1403] gi|281375074|gb|ADA64592.1| Alanine racemase [Lactococcus lactis subsp. lactis KF147] Length = 367 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 21/184 (11%), Positives = 56/184 (30%), Gaps = 9/184 (4%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63 ++D + + NN++ ++ A+K A + + ++ + G S+L E Sbjct: 12 IVDLKAIRNNIEKFKKHIH-PNAEIWPAVKADAYGHGSVEVSKAVSDLVGGFCVSNLDEA 70 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + ++D + ++ + L K Q+ + L+I+ Sbjct: 71 IELRNHLVTKPILVLSGIVPEDVDIAAALNISLTAPS---LEWLKLVVQEEAELSDLKIH 127 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 V + + + + DK + + F + + Sbjct: 128 IGVDSGMGRIGIRDVEEANQMIELADKYAINFEGI-FTHFATADMADDTKFKDQQARFNK 186 Query: 184 KEFG 187 G Sbjct: 187 IMAG 190 >gi|266619447|ref|ZP_06112382.1| alanine racemase domain protein [Clostridium hathewayi DSM 13479] gi|288869010|gb|EFD01309.1| alanine racemase domain protein [Clostridium hathewayi DSM 13479] Length = 371 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 49/168 (29%), Gaps = 13/168 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 ++TP +ID K N+ AG +L +K L G T + + Sbjct: 9 LETPCVVIDMAKAEENVIRMQAEADAAGCRLRPHIKTHKMPLFARMQLAHGAAGITCAKV 68 Query: 61 YEVMLGHEKFGGETHAYNVAY------KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E G + K A + +++ + A+ Sbjct: 69 SEAE-VMADGGADDIFIAYPMVGGFRIKRAVALARRLKRLILAVDSMECAVPLNEAAKAA 127 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM 162 + +R+ + + ++ E K+ + N+ G+ Sbjct: 128 GITLEVRLEVDTGAKRTGVQR-----TKAAELAKEVHQLSNLNLTGIY 170 >gi|316934654|ref|YP_004109636.1| alanine racemase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315602368|gb|ADU44903.1| alanine racemase domain protein [Rhodopseudomonas palustris DX-1] Length = 360 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 2/88 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP +ID ++ +N+ + AGV +K + + G T L Sbjct: 13 VGTPALVIDMDRVEHNIARIQALCDAAGVANRPHIKTHKSPLLAKMQIDAGARGITCQKL 72 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEID 87 E + +YN+ ++ Sbjct: 73 GEAEVMADAGIDDILISYNLIGEEKMAR 100 >gi|283797687|ref|ZP_06346840.1| alanine racemase [Clostridium sp. M62/1] gi|291074583|gb|EFE11947.1| alanine racemase [Clostridium sp. M62/1] Length = 422 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 33/333 (9%), Positives = 72/333 (21%), Gaps = 27/333 (8%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYM-DGTTSSSLYEV 63 ID + +N G+K++ A+K A L Q D ++ E Sbjct: 14 IDLDTIRSNFAALRS-MAGPGIKIMPAVKANAYGHGIVESCRALEQAGADYLGVGNIDEA 72 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 +L E + + D + +V ++ H + Sbjct: 73 ILLRENGIQTPILIFAGNLVEEVADLYIRYSLIPTIFSVKAAQAISRLSKAEHP-----V 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + L F + +I+ + M + +K + Sbjct: 128 FLGIETGRGRLGVNAEEFPDFVRQTAALPGIKIEGIYSHMAAADWPDKPHEYADWQYRRF 187 Query: 183 E---KEFGHFITQIEWISLGG-----GIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + + ++ L EK L Sbjct: 188 LDGTRVLKELGLSVPFMQLANTPGSIAYPNLRLSGICPGRAVWGYSPLEKRDGHPALSFP 247 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH------VPDYLLYQESATIYPNTGPY 288 + + V+ + + + D + + Sbjct: 248 MKAWKSRLLMVKDVIGGKFGPGYQAVRLDVPKHIGVMAGGISDGISPNFANGGSVLLRGK 307 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 V CL + GD + Sbjct: 308 RVPVASSICLEH-TILDLTDCPEAAEGDEVVLF 339 >gi|242371567|ref|ZP_04817141.1| alanine racemase [Staphylococcus epidermidis M23864:W1] gi|242350719|gb|EES42320.1| alanine racemase [Staphylococcus epidermidis M23864:W1] Length = 382 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 37/336 (11%), Positives = 90/336 (26%), Gaps = 28/336 (8%) Query: 5 PYYL-IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMD-GTTSS 58 P YL ++ +L N + + ++ +K + + + L ++ + Sbjct: 8 PTYLNVNLDAILANYQIFDQL--HHNKTVISVIKANSYGLGSVRIAQHLMEHGASFFAVA 65 Query: 59 SLYEV-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 +L E L + V + A+ + + K+ + KK Sbjct: 66 TLDEAIELRMHGIKAKILILGVIRTEDISKAIQHRVALTVPSKAWLKEAIKNIPEDNEKK 125 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + L + + E + E G+ H ++ + Sbjct: 126 LWLHAKLD----TGMGRLGMKDVEEYREVVDLIDKREHLVFEGVYTHFASADEPGDSMNE 181 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 + + + +I D + + Y Q + + Sbjct: 182 QFEFFKTVVNQV-EKPTYIHTQNSAASLLMDGQFCNAIRLGISLYGYYPSQYVKDHVKVH 240 Query: 238 VTNTTTLNTTVLDISE---NIKNLVIVDSSVEAHVPDYL--------LYQESATIYPNTG 286 + + L + ++ + + + + Y N Sbjct: 241 LRPSAQLVSEIVQVKTLKAGETVSYGRTFKATEEMRIAILPIGYADGYLRAMQGAYVNVN 300 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322 + V GR C+ I + VK+GD++ D Sbjct: 301 GHQCEVVGRVCMDQTIL---RVPEDVKVGDKVILMD 333 >gi|289678897|ref|ZP_06499787.1| alanine racemase, N-terminal [Pseudomonas syringae pv. syringae FF5] Length = 337 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 7/135 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLY 61 TP L+D ++ +N+ GV+L +K + + G T S+L Sbjct: 12 DTPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTLK 71 Query: 62 EVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117 E + + A + + C I+ ++V+ A Sbjct: 72 EAEHCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVTAARAI--VAFGQAHD 129 Query: 118 IGLRINPSVSYSKFI 132 + + Sbjct: 130 ERFDVWIEIDCDGHR 144 >gi|172062516|ref|YP_001810167.1| alanine racemase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171995033|gb|ACB65951.1| alanine racemase domain protein [Burkholderia ambifaria MC40-6] Length = 376 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 79/322 (24%), Gaps = 31/322 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ NN+ GVK +K + D + G T S+L Sbjct: 6 LNTPAALIDVDRMRNNIARMQAHLDALGVKFRPHVKTTKCQQVVDAQIAAGAQGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V ++ I+ +++ N + Sbjct: 66 KEAEQFFAA-GVRDIVYAVGMIPAKLGQALALRRQGCDLKIVADSLQTANSIAE--FGRE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF--- 172 + V RP L + + G++ H + Sbjct: 123 HGERFDVWIEVDVDGHR--SGIRPDDGLLIDVGRALVDGGMALGGVLAHAGSSYEYDTHD 180 Query: 173 ------LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + +S+ G + + + Sbjct: 181 ALVAIAEQERGRTVHAAERLRAAGLPCPVVSI-GSTPTALSATNLDGVTEVRAGVYVLFD 239 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 + ++ A+ ++ TTV+ E + D S Sbjct: 240 LVMHNIGVCALADIALSVLTTVIGHQEEKGWA----------IVDAGWMAMSRDRGTQRQ 289 Query: 287 PYTAMVCGRSCLAGDIFGEFHF 308 GD+ GE+ Sbjct: 290 ARDFGYGQVCTEDGDVLGEYVM 311 >gi|330953813|gb|EGH54073.1| alanine racemase [Pseudomonas syringae Cit 7] Length = 378 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 20/171 (11%), Positives = 46/171 (26%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ +N+ GV+L +K + + G T S+L Sbjct: 8 LDTPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A + + C ++ ++V+ Sbjct: 68 KEAEHCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSLLTDSVAAARAI--VVFGQAH 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + + + G+M H Sbjct: 126 DERFDVWIEIDCDGHRSGLTV--DDASLVEVARTLVDGGMQLRGVMTHAGS 174 >gi|159043441|ref|YP_001532235.1| alanine racemase domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911201|gb|ABV92634.1| alanine racemase domain protein [Dinoroseobacter shibae DFL 12] Length = 387 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 63/214 (29%), Gaps = 18/214 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57 I+TP ++D L N+ K GV+ + K + + + G Sbjct: 27 IQTPCLVVDLDALERNVVKMGNFAKEMGVRHRVHGKMHKSVDVAKLQMELGGACGVCCQK 86 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------ 111 S E + G + + +D L+ + + ++ ++ A Sbjct: 87 VSEAE---AFARGGIKDVLVSNQVRDPAKIDRLARIPRLGARAICCVDDIENVADLSAAA 143 Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169 + + I+ ++ + S ++ G M H + + Sbjct: 144 TKHGTQIECLVEIDCGAGRCGVTTTPAVVEIAKAIDAAPGLKFSGLQAYQGAMQHLDSYD 203 Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGG 200 + AM+K+ + + + GG Sbjct: 204 ERKAKIDIAVAMVKDAVDALKAEGLECDIVGGGG 237 >gi|10952530|gb|AAG24954.1|AF242414_1 unknown [Paenibacillus alginolyticus] Length = 226 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 51/171 (29%), Gaps = 12/171 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTS--S 58 ++TP LID + + N+ + GVKL K + + G T Sbjct: 7 LETPCVLIDSEIMQRNIAAMAAVAAKHGVKLRPHAKTHKLPSVALRQITAGAVGVTVAKV 66 Query: 59 SLYEVMLGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S EVM G AY + + + ++++ ++ A +L Sbjct: 67 SEAEVMAAG-GVGSIFIAYPLVTPGKIERAVRLSQQIELIVGMDSLAGAQLLEETAARLG 125 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166 + +R+ L F E + + G+ Sbjct: 126 ATLQVRLEID-----TGLRRTGVGFESALEVADEIARLPHLRLTGIYTFRG 171 >gi|170747958|ref|YP_001754218.1| alanine racemase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170654480|gb|ACB23535.1| alanine racemase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 373 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 32/134 (23%), Gaps = 8/134 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCF--AAWGMFDTLNQYMDGTTS-- 57 + TP L+D L N+D K G++ K + + G Sbjct: 16 VDTPCLLVDLDALERNVDKLGRFMKAHGLRHRAHAKTHKSSDITVLQIERGGACGVCCQK 75 Query: 58 SSLYEVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 S E L + + + + ++ A K Sbjct: 76 VSEAEA-LVSAGIRDVLVSNQVVAPKKIERLAALATRARVLVCVDDLGNVDDLSAAAVKY 134 Query: 115 HKKIGLRINPSVSY 128 + + V Sbjct: 135 GVTLECLVEIDVGA 148 >gi|260576176|ref|ZP_05844169.1| alanine racemase domain protein [Rhodobacter sp. SW2] gi|259021656|gb|EEW24959.1| alanine racemase domain protein [Rhodobacter sp. SW2] Length = 372 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 42/154 (27%), Gaps = 8/154 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTS--S 58 ++TP ++D L N+ + AGV+L + K + + + G Sbjct: 21 VQTPSLILDLDALEANIASMQSQADAAGVRLRVHGKMHKSAEIAQMQIAAGACGICCQKV 80 Query: 59 SLYEVMLGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIF-NTVSQLNKFKDKAQKL 114 S E D L + + + + + AQ+ Sbjct: 81 SEAEA-FARAGLRDILITNQVRGAVKTDRLARLPLLGARILTCVDDPANVAELSAAAQRH 139 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK 148 +I + + + +A P Sbjct: 140 GTEIEVLVEIDCGAGRCGVAPDQAPGLAQAIVAA 173 >gi|282855759|ref|ZP_06265065.1| alanine racemase domain protein [Pyramidobacter piscolens W5455] gi|282586391|gb|EFB91653.1| alanine racemase domain protein [Pyramidobacter piscolens W5455] Length = 369 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 36/133 (27%), Gaps = 6/133 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP LID++ + +N+ L G KL K + + G + + Sbjct: 6 LDTPSLLIDREIMRDNMRFMLDYAARHGAKLRPHTKTHKMPAVARLQVEMGARGIAVAKV 65 Query: 61 YEVML-GHEKFG----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + ++ A + ++ L + Sbjct: 66 GEAEAMAADGLDDIFIANEIVGVQKWERIRALAQRGVTVSFGVDSPETLPGIQKVFSGAD 125 Query: 116 KKIGLRINPSVSY 128 + + I V Sbjct: 126 RPAEVMIEIEVGE 138 >gi|291617494|ref|YP_003520236.1| Hypothetical Protein PANA_1941 [Pantoea ananatis LMG 20103] gi|291152524|gb|ADD77108.1| Hypothetical Protein PANA_1941 [Pantoea ananatis LMG 20103] Length = 388 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 55/209 (26%), Gaps = 10/209 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSL 60 I TPY L+DK K N++ + ++ LK L T S+L Sbjct: 19 ITTPYLLLDKVKFERNINRLYQRIEGQRCQIRPHLKTLRTLQSAPYLLKASSSPATVSTL 78 Query: 61 YEVML-GHEKFGGETHAYNVAYKDCEIDAVLSN---CDTIIFNTVSQLNKFKDKAQKLHK 116 E F +A +A A L ++ ++++Q D A + Sbjct: 79 AEAEAFVAAGFSNVLYAVGIAPAKLPRIAALRCSGKQVHVLLDSMAQAQAISDYALQHQV 138 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG----LMFHNNCENKSF 172 + I + + + + + + + + Sbjct: 139 TFSVFIEIDCDGHRGGIRPDDGTLAEIAGHLHQHGMVVEGVMTHAGESYHCRTPQDIQRA 198 Query: 173 LCFSAMLKNI-EKEFGHFITQIEWISLGG 200 + +S+G Sbjct: 199 AQQECQAAITAAQHIRAAGIPCPVVSVGS 227 >gi|284107226|ref|ZP_06386367.1| Alanine racemase [Candidatus Poribacteria sp. WGA-A3] gi|283829973|gb|EFC34252.1| Alanine racemase [Candidatus Poribacteria sp. WGA-A3] Length = 386 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 33/327 (10%), Positives = 84/327 (25%), Gaps = 15/327 (4%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-----GTTSSSLYE 62 +ID L +NL + V +L +K + L + + +S++E Sbjct: 13 IIDLNALAHNLRELRRVLA-PRVDILAVIKANGYGHGYKALAEALSQLGVRRFGVASVHE 71 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 +L E E ++ ++ + ++ + + + + + Sbjct: 72 GVLLREAGRLEDVIVMGGMLPGQVKDLVHANLIPTLSDADTMHALSREVSQHDRPYPIHV 131 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + N + L + + Sbjct: 132 KVDTGMRRLGFTTREVLPLLQSPAFSHLLSCQGLMTHLADADNPDPAFTLLQLDRFHETV 191 Query: 183 EKEFGHFITQIEW-ISLGGGIHFTDKDYPVKDFCQRLKEF--SEKYSVQIYLEPGEAIVT 239 + + + + L + ++ V + L+P ++ T Sbjct: 192 SSLPANGPRPWRHAANTAAILWHPRAHLDMVRPGLLLYGYTPAQDRDVPVSLQPVLSLTT 251 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY-----TAMVCG 294 L T + +L + NTG + G Sbjct: 252 KVVHLKTAGKGEPVSYGDLYRTRRDSRLAILPIGYAHGYNRRLSNTGEVIIHDRRFPIVG 311 Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFE 321 R C+ + + +K GD + Sbjct: 312 RICMDM-TVVDVTDDPTIKQGDDVILM 337 >gi|239834636|ref|ZP_04682964.1| Serine racemase [Ochrobactrum intermedium LMG 3301] gi|239822699|gb|EEQ94268.1| Serine racemase [Ochrobactrum intermedium LMG 3301] Length = 418 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Query: 2 IKTPYYL-IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59 I+TP Y+ ID+ +L+ NL AGV+L +K + + + Q G T+S Sbjct: 52 IQTP-YVEIDEDRLIRNLKEMQQKADKAGVRLRPHIKTHKSLMIANRQLQLGAIGVTASK 110 Query: 60 LYEVMLGHEKFGGET 74 E ++ E Sbjct: 111 PDEALVFVEGGIPSV 125 >gi|117619060|ref|YP_857116.1| alanine racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560467|gb|ABK37415.1| alanine racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 408 Score = 42.1 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 83/340 (24%), Gaps = 42/340 (12%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL-----NQYMDGTTSSSLYEV 63 +D +N+ T + G K+ +K A D L + +S E Sbjct: 46 VDLGAFEHNIQTLKDRLGDKGPKICAIMKADAYGHGIDLLVPSVVKAGIPCIGIASNEEA 105 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + EK A E++ L + ++ D AQ+ H I + I Sbjct: 106 RVAREKGFTGRLMRVRAATPAEVEQALPYKMEELIGSLVSAQGIADIAQRHHTNIPVHI- 164 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEI-KNVNGLMFHNNCENKSFLCFSA----- 177 N RL + +D + K + + + + Sbjct: 165 ----ALNSAGMSRNGIDLRLADSKEDALAMLKLKGITPVGIMTHFPVEEKEDVKMGLAQF 220 Query: 178 ----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 + I + + D + + L Sbjct: 221 KLDSQWLLEAGKLDRSKITIHAANSFATLEVPDAYFDMVRPGGLL-------YGDSIPSY 273 Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL------YQESATIYPNTGP 287 E T V ++ + D L Y + + Sbjct: 274 TEY--KRVMAFKTQVASVNHYPAGNTVGYDRTFTLKRDSWLANLPLGYSDGYRRALSNKA 331 Query: 288 Y------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 Y V G++ + I + K VK GD + Sbjct: 332 YVLIQGQKVPVVGKTSMNT-IMVDVTDLKGVKPGDEVVLF 370 >gi|150376682|ref|YP_001313278.1| alanine racemase domain-containing protein [Sinorhizobium medicae WSM419] gi|150031229|gb|ABR63345.1| alanine racemase domain protein [Sinorhizobium medicae WSM419] Length = 352 Score = 42.1 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 23/260 (8%), Positives = 62/260 (23%), Gaps = 18/260 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 I+TP L+D N+ G+++ +K + + L+ G T + Sbjct: 5 IETPAVLVDLDIARRNILAFQAYADRHGIRVRPHIKTHKLPQLAELQLDSGAIGITCQKV 64 Query: 61 YEVML---GHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E G + YN +++ + + ++ Sbjct: 65 TEAEAMVDGSARIKEVLITYNLLGEEKLARLARLSEKVTVSVVADNATVVDGLGAFFADA 124 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNNCENKSF 172 K + + + + R + + + Sbjct: 125 GKPMTVLVECNTGA--------ERCGVATPAEAARLAMRIAAAPGLRFGGLMTYPPADGA 176 Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232 + ++ ++ ++ GG R + + Sbjct: 177 ARVQTFMSEAKQLIEARGIEVPCVTSGGTPGMMQAAEAPVASEHRPGTYIY-NDRSLVAR 235 Query: 233 PGEAIVTNTTTLNTTVLDIS 252 + T+ TV+ + Sbjct: 236 GVASWDDCALTVLATVVSVP 255 >gi|62261120|gb|AAX77961.1| unknown protein [synthetic construct] Length = 504 Score = 42.1 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 62/235 (26%), Gaps = 25/235 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG-- 54 P L + L N LD A L +K + + Y Sbjct: 78 PLVLYFEHILKNQLDKLYTSFGKAIDDFSYTCKYSLAYPIKVNPEQKIIKAIYDYHQHNQ 137 Query: 55 ----TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 + E + +KD + I + + + + Sbjct: 138 VSLDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEI 197 Query: 111 AQK---LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLM 162 L + ++ + + F + F + + I N + L Sbjct: 198 NIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQKFGLSLSQINECINFLKTNQLQQKLLLLH 257 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214 H + KS A ++ + + + +E+I GGG+ +Y + Sbjct: 258 SHIGSQIKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGGLAVNYDEYDRPSY 312 >gi|291530912|emb|CBK96497.1| alanine racemase [Eubacterium siraeum 70/3] Length = 379 Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 84/326 (25%), Gaps = 19/326 (5%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSS-LYEV 63 ID L +N + + K + + +K A + L + S L+E Sbjct: 12 IDLDALEHNYNEIKKLAKGKDILAV--VKANAYGHDDKAVCLKLQELGVKYYGVSNLWEG 69 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + T + D +L T +V + D A K+ + I Sbjct: 70 EKLRQHGITGTILTFGYTDEDYFDELLEYGITQTAGSVQYAKQLSDYAVSKGVKLPVHIK 129 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + ++ + + D + ++ + + + Sbjct: 130 VNTGMTRVGIDSQQEMLDIIAMPGLDCKAAY----THFAAADSLDPSDVEYTDRQQEKLM 185 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 K I + GG I+ D + L Y +++ + + + Sbjct: 186 KIAKDKGLLIHSQNSGGIIYHGDFGGDIVRAGVILYGHYPNYPLEVPFDMKSVMTVKSVV 245 Query: 244 LNTTVL--DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-----YTAMVCGRS 296 + + + + V + + G V GR Sbjct: 246 SQLKTIPAGTQISYGRTYTAEKEMTVAVIPIGYADGYFRDFSSKGKMLINGVLCNVVGRV 305 Query: 297 CLAGDIFGEFHFEKPVKIGDRISFED 322 C+ + +K GD + Sbjct: 306 CMDQ-TIVDVSNVPDIKTGDIVYVYS 330 >gi|332716644|ref|YP_004444110.1| alanine racemase [Agrobacterium sp. H13-3] gi|325063329|gb|ADY67019.1| alanine racemase [Agrobacterium sp. H13-3] Length = 362 Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 48/207 (23%), Gaps = 15/207 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTS--S 58 I TP +ID+ +L N+ A G+ +K + Q G Sbjct: 15 ISTPMPVIDEDRLAANIARAQSYLDGHGMAFRPHIKTHKIPAIAKQQLQAGAIGINCQKV 74 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT----IIFNTVSQLNKFKDKAQKL 114 S EV F YN+ N ++ ++ A Sbjct: 75 SEAEV-FADAGFDDILITYNILGVAKLSRLRALNARIGQLSVVADSAVT---IAGLAGTF 130 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + L + + + + + + + N G Sbjct: 131 DAERPLSVLVECD--TGGKRCGVQTPDAVLQLAEKIVAAPGLNFKG--ILTYPAPGGAEK 186 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGG 201 ++ S GG Sbjct: 187 VENFIRETMALLAEKGIDCPVRSSGGS 213 >gi|302390371|ref|YP_003826192.1| alanine racemase domain protein [Thermosediminibacter oceani DSM 16646] gi|302200999|gb|ADL08569.1| alanine racemase domain protein [Thermosediminibacter oceani DSM 16646] Length = 372 Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 2/81 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP +L+D L N+ I K G +L +K + + G +L Sbjct: 6 LPTPVFLVDLDVLEQNIKETADIVKTYGKRLWPMVKTHKSTEIAAMQKAAGAEGFLVGTL 65 Query: 61 YEV-MLGHEKFGGETHAYNVA 80 E L + F AY VA Sbjct: 66 LEAERLVEKGFNDIMLAYPVA 86 >gi|322378630|ref|ZP_08053066.1| arginine decarboxylase [Helicobacter suis HS1] gi|321148937|gb|EFX43401.1| arginine decarboxylase [Helicobacter suis HS1] Length = 624 Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 34/298 (11%), Positives = 85/298 (28%), Gaps = 53/298 (17%) Query: 11 KQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWG-MFDTLN-----QYMDGTTSSSL 60 ++++ + + + + LK + + + G + S Sbjct: 56 EKQVKKLFNMFSSAIEQYHYSGAFRAVFPLKVNHMPYFVLPLVEISKHFEGHYGLEAGSK 115 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---------- 110 E++L +KD E+ + ++ + + + Sbjct: 116 AELILAMSYIHEGAPITVNGFKDKEMIELGFIAASMGADITLTIEGLSELKSILEVALEN 175 Query: 111 -----AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KN 157 +L KIG+R+ S A ++ G + +E+ + Sbjct: 176 NTTGENTRLCPKIGIRVRLHSSGVGV-WAKSTGIHAKFGLASTELLEAMHLLEAHGLLEQ 234 Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY---- 209 ++ + FH + LK + + I++GGG+ + Sbjct: 235 LSMIHFHIGSQISDITPLKKALKEAGNIYAELRKMGAFNLNSINIGGGLAIEYSQHKHRC 294 Query: 210 -----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + + ++ I++E G I + L VL++ Sbjct: 295 GRNYTLEEFAGDVVFLLKEIVKNKKELEPNIFIESGRFISASHAVLVAPVLELFSQDY 352 >gi|304317133|ref|YP_003852278.1| alanine racemase domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778635|gb|ADL69194.1| alanine racemase domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 393 Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 21/191 (10%), Positives = 52/191 (27%), Gaps = 7/191 (3%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYMD-GTTSSSLYEVM 64 Y++D + N + L K F + + + + + E Sbjct: 31 YVLDLDSIYENAKLLKEAANKNNIILYYMTKQFGRNPIVAKIIEEAGIEKAVAVDIDEAK 90 Query: 65 LGHE---KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + ++ K G H + D + ++ + D I + + + D A+KL + + Sbjct: 91 ILYKNGLKIGHIGHLVQIPKNDI-MASLKMHPDVITCFSYDKAAELSDIAEKLGIRQNIL 149 Query: 122 INPSVSYSKFILADPNR-PFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + L + + + + ++ G+ Sbjct: 150 LRVIDDKDDIYPGQYGGIKLKDLRKIASNILRLKNIDIVGITSFPCFLYDYNSRKIKATH 209 Query: 181 NIEKEFGHFIT 191 N E Sbjct: 210 NAETLLRAKNI 220 >gi|218281653|ref|ZP_03488054.1| hypothetical protein EUBIFOR_00621 [Eubacterium biforme DSM 3989] gi|218217260|gb|EEC90798.1| hypothetical protein EUBIFOR_00621 [Eubacterium biforme DSM 3989] Length = 383 Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 34/343 (9%), Positives = 81/343 (23%), Gaps = 34/343 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM-DGTTSSSLYEV 63 ID + +N+ + KN + + +K A L + D SS+ E Sbjct: 12 IDYDAIRHNVKEVKKLVKNTKIMGI--VKANAYGLGDVACAKALQKCGVDYFGVSSIDEA 69 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + ++ + A++ KI Sbjct: 70 LNLRNAGIQDNILILGYTPSMHFHYLHEQNIVQSLVSIEYARELNAYAKENDVKIRCHCK 129 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL-----CFSAM 178 + + + + ++E+ F + + Sbjct: 130 VDTGMCRTGIVYQEQDKHIEDIYEEYRLENLCVEGIFSHFPVSDCLDEDCTEFTKKQIQL 189 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--RLKEFSEKYSVQIYLEPGEA 236 + L + ++C+ L + Sbjct: 190 FDEVIDLLKSQGIDPGIRHLQNSYGILNYPELEYEYCRPGLLYMGVTSDDHIKIKTNPDF 249 Query: 237 IVTNTTTLNTTVL--------------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282 I + N +++ I+E + + +P L Q + Sbjct: 250 IPIMSMYANVSLVKWIYPGQSVSYGRHFIAEKPTKVATMSIGYADGLPRLLSNQGFEVLV 309 Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + G C+ + + + VK GD + V Sbjct: 310 HG---QRCKLIGNLCMDQCMI-DVTEVEDVKEGDVVCI--VGH 346 >gi|87122819|ref|ZP_01078691.1| putative threonine aldolase [Marinomonas sp. MED121] gi|86161925|gb|EAQ63218.1| putative threonine aldolase [Marinomonas sp. MED121] Length = 382 Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 16/232 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD--GTTS-- 57 I+TP ++D L N+ T K+ GV+ + K + + Q D G Sbjct: 24 IQTPCLVVDLDALEKNIKTMGQYAKDMGVRHRVHGKMHKSVDIALLQEQLGDSCGVCCQK 83 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------ 111 S EV + G + + +D L+ + T+ ++ ++ A Sbjct: 84 VSEAEV---FARGGIKDVLVSNQVRDPAKIDRLARMPKLGARTICCVDDIENVAELAAAV 140 Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169 + + I+ P ++ S I+ G M H Sbjct: 141 AKHDTQIECLVEIDCGAGRCGVQAGQPVVDIAKAIAATPGLKFSGIQAYQGAMQHMESYA 200 Query: 170 KSFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQRLKE 220 ++ + + + +E +GGG + L+ Sbjct: 201 DRKEKIDIAVEMVARSIEMLKAEGLECDIVGGGGTGSYYFEGNSGVFNELQC 252 >gi|315425297|dbj|BAJ46964.1| alanine racemase domain protein [Candidatus Caldiarchaeum subterraneum] Length = 360 Score = 42.1 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 100/333 (30%), Gaps = 28/333 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60 I TP ++D + L N+ ++ G KL +K + + DG L Sbjct: 6 IDTPALIVDVKVLKRNITEMADFARSLGKKLRPHVKTHKTPEIAWMQMEAGADGICVQKL 65 Query: 61 YEVMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E + E + N + ++ + V +++ ++ Sbjct: 66 GEAEVMAEAGLDDILVSNEVVGVQKMHRLVKLAEKVKLSVAVDDVENVSELGRFCRENGV 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 ++G+ ++ + + L EK + + G H Sbjct: 126 EVGVYVDVDCGMHRTGVPPEKAW--LLAEKVTRTEGVYLVGLMGYEGHAGSPTSREERHK 183 Query: 177 AMLK------NIEKEFGHFITQIEWISLGGG--IHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + K + + +S+G + + + V + + F++ Y V+ Sbjct: 184 LIEEAVKATLHAAKLMKNNGIEPGEVSMGSSATVRVSGRYEGVTELQPGMYVFNDWYLVE 243 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288 E + T + + + ++ + E IY + + Sbjct: 244 REAATQETCALHVLTTVMSKTSPERCVVDAGSKAFHLDMGRYPVCVGVEGVEIYKLSEEH 303 Query: 289 -TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + G++ VK+GDR+ F Sbjct: 304 GWVKLSGKAVD------------KVKLGDRLEF 324 >gi|62319461|dbj|BAD94828.1| diaminopimelate decarboxylase - like protein [Arabidopsis thaliana] Length = 43 Score = 42.1 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 7/34 (20%), Positives = 15/34 (44%), Gaps = 1/34 (2%) Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYN 360 ++ + +N P DG+I IR +++ Sbjct: 1 MSMASTYNLKMRPPEYWVEEDGSITKIRHAETFD 34 >gi|237799332|ref|ZP_04587793.1| hypothetical protein POR16_10901 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022188|gb|EGI02245.1| hypothetical protein POR16_10901 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 381 Score = 42.1 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 49/171 (28%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ N+ GV+L +K + + + G T S+L Sbjct: 11 LDTPVALLDVPRMQRNIQRMQQRMNELGVRLRPHVKTSKSLPVIQAQIAAGASGVTVSTL 70 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A + C I+ ++V A Sbjct: 71 KEAAHCFAEGINDVFYAVAIAPGKLHQALKLRSDGCRLSILTDSVVAAQAI--VAFGQQH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + S L E K + + G+M H Sbjct: 129 DERFEVWIEIDCDGHR-SGLAVEDSALTEVAKTLV-EGGMQLRGVMTHAGS 177 >gi|187931921|ref|YP_001891906.1| alanine racemase [Francisella tularensis subsp. mediasiatica FSC147] gi|226711044|sp|B2SHB9|ALR_FRATM RecName: Full=Alanine racemase gi|187712830|gb|ACD31127.1| alanine racemase [Francisella tularensis subsp. mediasiatica FSC147] Length = 365 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64 I KQ L NN+ K+ +K A + + + +D ++ E Sbjct: 6 ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + V Y + I+ ++S + + K + A++L KK+ IN Sbjct: 64 RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + ++ + + + ES+ + G+ H C + + K Sbjct: 123 NTGMNRMGVNYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173 >gi|170780960|ref|YP_001709292.1| putative alanine racemase fusion protein [Clavibacter michiganensis subsp. sepedonicus] gi|169155528|emb|CAQ00640.1| putative alanine racemase fusion protein [Clavibacter michiganensis subsp. sepedonicus] Length = 578 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 37/332 (11%), Positives = 74/332 (22%), Gaps = 25/332 (7%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA--------AWGMFDTLNQYMDGTTSSS 59 +ID + +N+ T + A + A+K A A ++ + + +S Sbjct: 21 VIDLDAIRHNVRTLAALAAPARTMV--AVKADAYGHGALQVARAALESGAESLAVLDVAS 78 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ A+ AV D + + + +L + + + Sbjct: 79 AVELRRA--GIDARLLAWLHGVDTDFRVAVEEEID-LGVSALWELKRIAAAGRATGIRAR 135 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S+ P D + + + Sbjct: 136 VHLKADTGLSRNGATPELWPDLVRAAVAADSAGELTLHALWSHLADASPEDDDAALARFR 195 Query: 180 K----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + E + S G + D + S + Sbjct: 196 EAVRVAEELGARPVEKHLAASSAGIRLPAARFDMVRFGIAVYGISPFDDRSGRDLGLIPA 255 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPY-----T 289 + V L + V I Sbjct: 256 MTLEADVVSVKRVEAGHGVSYGLDHRTAGPSTLVLVPLGYADGIPRIAAPRASVLLNGRR 315 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 V GR A D + PV++GD Sbjct: 316 FPVAGRI--AMDQLVLDVGDLPVEVGDTAVIL 345 >gi|46117817|ref|XP_384835.1| hypothetical protein FG04659.1 [Gibberella zeae PH-1] Length = 366 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 23/211 (10%), Positives = 50/211 (23%), Gaps = 12/211 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP ++D + N+ + G + LK + + L G + L Sbjct: 13 LDTPSMIVDLDVMEANIKKLMDRLLPTGRNIRPHLKTTKSAIIAKKLVAAGAKGGCVAKL 72 Query: 61 YEVMLG-HEKFGGETHAYNVAYKDCEID----AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E F + I+ + + Sbjct: 73 SEAEAITAAGFTDLLITCEIVGPAKVRRLVELFKKHQDLRIVVDDADAATAINNALANSG 132 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 + + + + L + + V G H + Sbjct: 133 SQDPINVLIDLDVGLHRTGVKPEGALPLARHIDTLKQMRLIGVQGYEGHLQHLHDFQDRK 192 Query: 176 SAMLKNI------EKEFGHFITQIEWISLGG 200 L+++ +E IE ++ GG Sbjct: 193 EQCLESMRILTETAQELKKEGFNIEVVTTGG 223 >gi|315426064|dbj|BAJ47711.1| alanine racemase domain protein [Candidatus Caldiarchaeum subterraneum] Length = 366 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 100/333 (30%), Gaps = 28/333 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60 I TP ++D + L N+ ++ G KL +K + + DG L Sbjct: 12 IDTPALIVDVKVLKRNITEMADFARSLGKKLRPHVKTHKTPEIAWMQMEAGADGICVQKL 71 Query: 61 YEVMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E + E + N + ++ + V +++ ++ Sbjct: 72 GEAEVMAEAGLDDILVSNEVVGVQKMHRLVKLAEKVKLSVAVDDVENVSELGRFCRENGV 131 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 ++G+ ++ + + L EK + + G H Sbjct: 132 EVGVYVDVDCGMHRTGVPPEKAW--LLAEKVTRTEGVYLVGLMGYEGHAGSPTSREERHK 189 Query: 177 AMLK------NIEKEFGHFITQIEWISLGGG--IHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 + + + K + + +S+G + + + V + + F++ Y V+ Sbjct: 190 LIEEAVKATLHAAKLMKNNGIEPGEVSMGSSATVRVSGRYEGVTELQPGMYVFNDWYLVE 249 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288 E + T + + + ++ + E IY + + Sbjct: 250 REAATQETCALHVLTTVMSKTSPERCVVDAGSKAFHLDMGRYPVCVGVEGVEIYKLSEEH 309 Query: 289 -TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 + G++ VK+GDR+ F Sbjct: 310 GWVKLSGKAVD------------KVKLGDRLEF 330 >gi|118590603|ref|ZP_01548004.1| threonine aldolase, low-specificity [Stappia aggregata IAM 12614] gi|118436579|gb|EAV43219.1| threonine aldolase, low-specificity [Stappia aggregata IAM 12614] Length = 387 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 54/196 (27%), Gaps = 13/196 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57 I+TP ++D L N+ K G++ + K + + + G Sbjct: 27 IQTPCLVLDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVAKLQERLGGAVGVCCQK 86 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 S EV + G + + +D L+ T+ ++ + A Sbjct: 87 VSEAEV---FARGGIKDILVSNQVRDKAKIDRLARLPKFGCRTIVCVDDLANVADLSEAA 143 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 + + + + G D + K V+ +++ Sbjct: 144 VK-----HGTTLEVFIEIDCGAGRC-GVTTSDAVVEIAKAVDAASNLKFTGIQAYQGAMQ 197 Query: 178 MLKNIEKEFGHFITQI 193 + + E I Sbjct: 198 HIDSFEARKEKLDIAI 213 >gi|322379882|ref|ZP_08054168.1| arginine decarboxylase [Helicobacter suis HS5] gi|321147677|gb|EFX42291.1| arginine decarboxylase [Helicobacter suis HS5] Length = 624 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 35/298 (11%), Positives = 86/298 (28%), Gaps = 53/298 (17%) Query: 11 KQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWG-MFDTLN-----QYMDGTTSSSL 60 ++++ + + + + LK + + + G + S Sbjct: 56 EKQVKKLFNMFSSAIEQYHYSGAFRAVFPLKVNHMPYFVLPLVEISKHFEGHYGLEAGSK 115 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---------- 110 E++L +KD E+ + ++ + + + Sbjct: 116 AELILAMSYIHEGAPITVNGFKDKEMIELGFIAASMGADITLTIEGLSELKSILEVALEN 175 Query: 111 -----AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KN 157 +L KIG+R+ S I A ++ G + +E+ + Sbjct: 176 NTTGENTRLCPKIGIRVRLHSSGVG-IWAKSTGIHAKFGLASTELLEAMHLLEAHGLLEQ 234 Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY---- 209 ++ + FH + LK + + I++GGG+ + Sbjct: 235 LSMIHFHIGSQISDITPLKKALKEAGNIYAELRKMGAFNLNSINIGGGLAIEYSQHKHRC 294 Query: 210 -----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256 V + + + ++ I++E G I + L VL++ Sbjct: 295 GRNYTLEEFAGDVVFLLKEIVKNKKELEPNIFIESGRFISASHAVLVAPVLELFSQDY 352 >gi|307306768|ref|ZP_07586509.1| alanine racemase domain protein [Sinorhizobium meliloti BL225C] gi|306902059|gb|EFN32657.1| alanine racemase domain protein [Sinorhizobium meliloti BL225C] Length = 352 Score = 41.7 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 27/258 (10%), Positives = 66/258 (25%), Gaps = 14/258 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 I+TP L+D N+ G+++ +K M + L+ G T + Sbjct: 5 IETPAVLVDLDIARRNVLAFQAYADRHGIRVRPHIKTHKLPQMAELQLDAGAIGITCQKV 64 Query: 61 YEVML---GHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E G + YN +++ + + ++ Sbjct: 65 TEAEAMVDGGARIKDVLITYNLLGEQKLARLARLNERVTVSVVADNATVVDGLAAFFADA 124 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 K + + + + D + + +E + Sbjct: 125 GKPLTVLVECNTGA------DRCGVGTPSEAARLARRIAEAPGLRFGGLMTYPPADGAAR 178 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 A + + ++ ++ I+ GG R + + Sbjct: 179 VQAFMSDAKRLIEAEGLEVPCITSGGTPGMMQAAEAPIASEHRPGTYIY-NDRSLVARGV 237 Query: 235 EAIVTNTTTLNTTVLDIS 252 + T+ TV+ + Sbjct: 238 ASWEDCALTVLATVVSVP 255 >gi|16264461|ref|NP_437253.1| putative amino acid processing enzyme, low specificity D-threonine aldolase protein [Sinorhizobium meliloti 1021] gi|15140598|emb|CAC49113.1| amino acid aldolase or racemase [Sinorhizobium meliloti 1021] Length = 352 Score = 41.7 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 27/258 (10%), Positives = 66/258 (25%), Gaps = 14/258 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 I+TP L+D N+ G+++ +K M + L+ G T + Sbjct: 5 IETPAVLVDLDIARRNVLAFQAYADRHGIRVRPHIKTHKLPQMAELQLDAGAIGITCQKV 64 Query: 61 YEVML---GHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E G + YN +++ + + ++ Sbjct: 65 TEAEAMVDGGARIKDVLITYNLLGEQKLARLARLNERVTVSVVADNATVVDGLAAFFADA 124 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 K + + + + D + + +E + Sbjct: 125 GKPLTVLVECNTGA------DRCGVGTPSEAARLARRIAEAPGLRFGGLMTYPPADGAAR 178 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 A + + ++ ++ I+ GG R + + Sbjct: 179 VQAFMSDAKRLIEAEGLEVPCITSGGTPGMMQAAEAPIASEHRPGTYIY-NDRSLVARGV 237 Query: 235 EAIVTNTTTLNTTVLDIS 252 + T+ TV+ + Sbjct: 238 ASWEDCALTVLATVVSVP 255 >gi|325979040|ref|YP_004288756.1| alanine racemase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178968|emb|CBZ49012.1| Alanine racemase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 368 Score = 41.7 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 7/99 (7%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFAAWG----MFDTLNQYMDGTTSSSLYE 62 +ID + N+D K A+ K A + ++ +DG S++ E Sbjct: 12 VIDLDAICQNIDAVK--ANIPQDKKAFAVVKANAYGHGATNVAQAIHHLVDGFCVSNIDE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTV 101 + E ET E+ T+ + Sbjct: 70 ALELREAGIEETILILGVIMPDEVALARDYHVTLTVASQ 108 >gi|328957818|ref|YP_004375204.1| hypothetical protein CAR_c15290 [Carnobacterium sp. 17-4] gi|328674142|gb|AEB30188.1| conserved hypothetical protein [Carnobacterium sp. 17-4] Length = 385 Score = 41.7 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 23/206 (11%), Positives = 56/206 (27%), Gaps = 11/206 (5%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYMD-GTTSSSLYEVM 64 Y++D + N + K ++L LK + L + E Sbjct: 31 YVLDLDIIRENAKKLIETAKKNDIELFFMLKQIGRNPTIAKMLVELGIKNAVVVDFREAK 90 Query: 65 LGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + E + ++ D ++ + ++ +L A+++ K + + Sbjct: 91 IMMENNIPLGNVGHLVQIPQMLLKDIMMYGSKYLTVYSLEKLQAINGLAKEIGIKQKILL 150 Query: 123 NPSVSYSKFILADPNRPFSR----LGEKCKDKIESEIKNVNGLMFHNNC---ENKSFLCF 175 + + L K+ EI V E Sbjct: 151 RVVSDEDELYPGQYGGFTLKELPSLISLFKELKYIEISGVTSFPCFLYNAEKEILEPTHN 210 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGG 201 + +K +K I+ +++ Sbjct: 211 TETVKAAKKLLEKEGITIQELNIPSA 236 >gi|254369512|ref|ZP_04985523.1| hypothetical protein FTAG_01386 [Francisella tularensis subsp. holarctica FSC022] gi|157122466|gb|EDO66601.1| hypothetical protein FTAG_01386 [Francisella tularensis subsp. holarctica FSC022] Length = 365 Score = 41.7 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64 I KQ L NN+ K+ +K A + + + +D ++ E Sbjct: 6 ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + V Y + I+ ++S + + K + A++L KK+ IN Sbjct: 64 RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + ++ + + + ES+ + G+ H C + + K Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173 >gi|255539084|ref|XP_002510607.1| ornithine decarboxylase, putative [Ricinus communis] gi|223551308|gb|EEF52794.1| ornithine decarboxylase, putative [Ricinus communis] Length = 78 Score = 41.7 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 15/43 (34%) Query: 22 LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64 + R V+ L A+KC TL +S ++ Sbjct: 3 KWTRTLPMVRPLYAVKCNPEPTPVGTLATLGSNFDCASRADLK 45 >gi|123443312|ref|YP_001007286.1| hypothetical protein YE3103 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090273|emb|CAL13139.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 391 Score = 41.7 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 75/307 (24%), Gaps = 19/307 (6%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYM-DGTTSSSLYEVM 64 Y+ID ++ N L G+ L L K F + L + G + E Sbjct: 31 YVIDVDQVKQNARLLLETATRYGITLYLMSKQFGRNPLLCKLLLECGYQGIVAVDFKEAR 90 Query: 65 LGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 ++ H ++ + V + I ++ + + A + +K+ L + Sbjct: 91 QLYQYNLPVAHVGHLVQIPSAMVDEVVSRQPEVITVYSIDKAREIAAAAVRQNKEQALLL 150 Query: 123 NPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIKNVNG-LMFHNN-----CENKSFLCF 175 L ++ + G F Sbjct: 151 KVCHHGDLVYPGQEAGFSLDELPTVIREIKTIPGIRLVGVTHFPCMLFDNEKGKTLPSPN 210 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + L + Q+E ++ K + +PG Sbjct: 211 LSTLIEAKSILEQQGIQVEQVNGPSATGVESLPQLAKWGVTHAEPGHSLTGTMPSNQPGN 270 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295 T V + H+ + L+Y + + A V Sbjct: 271 QPEHVAMLYLTEVSHCHQGKSYCYGGGYYRRGHLSNALVYDQQW--------HAAKVVSP 322 Query: 296 SCLAGDI 302 + + D Sbjct: 323 ANDSIDY 329 >gi|54113967|gb|AAV29617.1| NT02FT0827 [synthetic construct] Length = 365 Score = 41.7 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64 I KQ L NN+ K+ +K A + + + +D ++ E Sbjct: 6 ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + V Y + I+ ++S + + K + A++L KK+ IN Sbjct: 64 RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + ++ + + + ES+ + G+ H C + + K Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173 >gi|315931021|gb|EFV09996.1| carboxynorspermidine decarboxylase domain protein [Campylobacter jejuni subsp. jejuni 327] Length = 38 Score = 41.7 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 20/33 (60%) Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362 + FNGI +P + + + ++ IREFSY DY Sbjct: 2 KNTTFNGIRLPNLMLLDHKNELQMIREFSYKDY 34 >gi|134302328|ref|YP_001122297.1| alanine racemase [Francisella tularensis subsp. tularensis WY96-3418] gi|172044165|sp|A4IZ25|ALR_FRATW RecName: Full=Alanine racemase gi|134050105|gb|ABO47176.1| alanine racemase [Francisella tularensis subsp. tularensis WY96-3418] Length = 365 Score = 41.7 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64 I KQ L NN+ K+ +K A + + + +D ++ E Sbjct: 6 ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + V Y + I+ ++S + + K + A++L KK+ IN Sbjct: 64 RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + ++ + + + ES+ + G+ H C + + K Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173 >gi|56707702|ref|YP_169598.1| alanine racemase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670173|ref|YP_666730.1| alanine racemase [Francisella tularensis subsp. tularensis FSC198] gi|254370208|ref|ZP_04986214.1| alanine racemase [Francisella tularensis subsp. tularensis FSC033] gi|81820797|sp|Q5NH94|ALR_FRATT RecName: Full=Alanine racemase gi|123359566|sp|Q14IP6|ALR_FRAT1 RecName: Full=Alanine racemase gi|56604194|emb|CAG45206.1| alanine racemase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320506|emb|CAL08589.1| alanine racemase [Francisella tularensis subsp. tularensis FSC198] gi|151568452|gb|EDN34106.1| alanine racemase [Francisella tularensis subsp. tularensis FSC033] gi|282158869|gb|ADA78260.1| alanine racemase [Francisella tularensis subsp. tularensis NE061598] Length = 365 Score = 41.7 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64 I KQ L NN+ K+ +K A + + + +D ++ E Sbjct: 6 ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + V Y + I+ ++S + + K + A++L KK+ IN Sbjct: 64 RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + ++ + + + ES+ + G+ H C + + K Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173 >gi|229085084|ref|ZP_04217335.1| Alanine racemase [Bacillus cereus Rock3-44] gi|228698209|gb|EEL50943.1| Alanine racemase [Bacillus cereus Rock3-44] Length = 391 Score = 41.7 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 31/337 (9%), Positives = 80/337 (23%), Gaps = 36/337 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM----DGTTSSSL 60 ++ + +N+ + + ++ A+K A A + + Sbjct: 13 VNLDAIKHNVREFKKRVNDENMTMMAAVKANAYGHGAVEVAKAAIEAGVNQLAVAFVDEG 72 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y + + + A++L KK + Sbjct: 73 IELREAGISVPILILGYTPVEAAKDAIEYDIMMTVYRIEDLKG---IDEVAKRLGKKARI 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG--LMFHNNCEN--KSFLCFS 176 ++ ++ + ++ + + G + E + Sbjct: 130 QVKID-----TGMSRIGLQEEEVAPFLEELKNMKHIEMEGVFTHYSTADEIDKTYTNMQT 184 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 + + + +I + ++ + Y Q Sbjct: 185 NLFEKAVTTAKEMGIHLPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSQEV-AHTVV 243 Query: 237 IVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNTGP---- 287 + +L + V I K ++ E + + + Sbjct: 244 SLQPALSLKSKVAHIKHAKKNRGVSYGNTYVATGEEWIATVPIGYADGYNRQLSNKGHAL 303 Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320 V GR C D PV++GD + F Sbjct: 304 INGVRVPVLGRVC--MDQLMLDVTNAMPVQVGDEVVF 338 >gi|94500388|ref|ZP_01306920.1| alanine racemase [Oceanobacter sp. RED65] gi|94427423|gb|EAT12401.1| alanine racemase [Oceanobacter sp. RED65] Length = 365 Score = 41.7 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 44/345 (12%), Positives = 90/345 (26%), Gaps = 34/345 (9%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63 +ID + L +N A + + + +K A A L + +S+ E Sbjct: 8 IIDLEALRSNYRLADSLAPQSQSIAV--VKANAYGHGAVPCAKALEPIVPAFAVASIDEA 65 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + E + + S + ++ + L + K L+ Sbjct: 66 IELREGGIRKPILLLEGPFSFGEVQIASEHEFWLMIENHNHLAFIEQCEHKKLICKPLKC 125 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + L + + +K K + V F + + A +K Sbjct: 126 WLKMDSGMHRLGFMPFEIAAIYQKLKSTSIVHDEIVVATHFAT-----ADVEGDAFVKEQ 180 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242 F I+ + ++ R S + + + + Sbjct: 181 IDCFNEAISGLGCLTSLCNSAGVMAWPQAHGSWNRPGFMLYGASPFELPQHNDKTLQSVM 240 Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPD-------YLLYQESATIYPNTGP-----YTA 290 TL + V+ + K + D N P Sbjct: 241 TLQSKVISVRNVKKGEAVGYGKTWIAQRDSRIATVTVGYGDGYPRHAKNGTPILVNNQRC 300 Query: 291 MVCGRSCLAGDIFGEFHFE-KPVKIGDRIS-------FEDVAGYN 327 + GR + D+ + V IGD + +VA Y+ Sbjct: 301 KLAGRV--SMDMITVDVTDVGSVNIGDDVICWGKDLPINEVAHYS 343 >gi|325001747|ref|ZP_08122859.1| metal-activated pyridoxal enzyme [Pseudonocardia sp. P1] Length = 336 Score = 41.7 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 4/72 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLYE 62 TP ++D L NL + ++ +K + L G T +++ E Sbjct: 8 TPALVVDASALEANLADMAAVLPGPRLRPH--VKAHKTTELSRRQLAHGHAGFTCATVRE 65 Query: 63 VM-LGHEKFGGE 73 V + G + Sbjct: 66 VEGMAAAGLGTD 77 >gi|114762422|ref|ZP_01441880.1| threonine aldolase, low-specificity [Pelagibaca bermudensis HTCC2601] gi|114545040|gb|EAU48044.1| threonine aldolase, low-specificity [Roseovarius sp. HTCC2601] Length = 387 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 43/136 (31%), Gaps = 11/136 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57 I+TP ++D L N+ K G++ K + + + G Sbjct: 27 IQTPALVLDLDALERNVKKMGDYAKAHGMRHRAHGKMHKSVDVLKLQMELGGAAGVCCQK 86 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQ 112 S EV + N +ID + + + V+ + + + AQ Sbjct: 87 VSEAEV-FVRAGI-KDVLVSNQVRDPAKIDRLAQLPKHGSEITVCVDDVANVAELSEAAQ 144 Query: 113 KLHKKIGLRINPSVSY 128 K ++G+ + Sbjct: 145 KHGTELGIFVEIDCGA 160 >gi|297204429|ref|ZP_06921826.1| alanine racemase domain-containing protein [Streptomyces sviceus ATCC 29083] gi|197715830|gb|EDY59864.1| alanine racemase domain-containing protein [Streptomyces sviceus ATCC 29083] Length = 382 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 3/84 (3%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSSL 60 TP+ ++D K+ N++ + GV L +K + + L+ T S+L Sbjct: 8 DTPFAVVDVHKVRRNVERLATRAERLGVTLRPHVKTAKSLDVAALLHAGDRPCPVTVSTL 67 Query: 61 YEVMLGHEKFGGETHAYNVAYKDC 84 E G Y V Sbjct: 68 AEAE-AFADGGYRDITYAVGIDPH 90 >gi|309812008|ref|ZP_07705774.1| alanine racemase, N-terminal domain protein [Dermacoccus sp. Ellin185] gi|308434066|gb|EFP57932.1| alanine racemase, N-terminal domain protein [Dermacoccus sp. Ellin185] Length = 200 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 2/80 (2%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSS 59 M TP + D L N+D + ++AGV L +K + G T ++ Sbjct: 1 MTATPRLVADLDVLERNIDAMASLGRDAGVALRPHVKTHKMPEIATMQRDAATHGITVAT 60 Query: 60 LYEVML-GHEKFGGETHAYN 78 + E + F + AY Sbjct: 61 IGEAEVFVDAGFDDVSIAYP 80 >gi|303273406|ref|XP_003056064.1| predicted protein [Micromonas pusilla CCMP1545] gi|226462148|gb|EEH59440.1| predicted protein [Micromonas pusilla CCMP1545] Length = 602 Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 78/257 (30%), Gaps = 41/257 (15%) Query: 49 NQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK-- 106 + G + S E++L + YKD + + + NT + K Sbjct: 121 AREGFGLEAGSKAELILSSDYSLPTPFLICNGYKDGDYVGLAVQSAALRVNTFIVIEKPS 180 Query: 107 ---FKDKAQ------KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----- 152 + A +G+R+ + +S + ++ G K+ I Sbjct: 181 DLQYYITAVGDLPRSAHRPFLGIRVRLTTGHSGHWG-PTSGDNAKFGLCAKEMIWLVASL 239 Query: 153 ---SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD 206 S + + L FH + + F ++ + + + ++ +GGG+ Sbjct: 240 ADESMLDCLRLLHFHVGSQVSNIATFKEAMRESTQMYAELVRLGAPMGFVDVGGGLGVEY 299 Query: 207 K-----------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTV 248 +Y ++++ + + ++ E G AIV+ L V Sbjct: 300 HGSQGWGGQRSTNYDMQNYANDVVAALQDTIMRTGIKPPVLVTESGRAIVSAADVLIFEV 359 Query: 249 LDISENIKNLVIVDSSV 265 + D S Sbjct: 360 VSTEPRGAMPSFDDDSF 376 >gi|84514523|ref|ZP_01001887.1| threonine aldolase, low-specificity [Loktanella vestfoldensis SKA53] gi|84511574|gb|EAQ08027.1| threonine aldolase, low-specificity [Loktanella vestfoldensis SKA53] Length = 387 Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 45/150 (30%), Gaps = 19/150 (12%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP ++D L N+ K+ G++ + K +++ +D Sbjct: 27 IQTPCLVLDLDALERNIKKMGDFAKSHGMRHRVHGK----------MHKSVDVA------ 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L EK GG + E+ A D ++ N V K A+ Sbjct: 71 ---LLQEKLGGSVGVCCQKVSEAEVFARGGIKDVLVSNQVRHPAKIDRLARIPKLGARAI 127 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKI 151 + L+ + E + Sbjct: 128 CCVDDIANIADLSAAAQKHGTQIECLVEID 157 >gi|255946227|ref|XP_002563881.1| Pc20g14030 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588616|emb|CAP86732.1| Pc20g14030 [Penicillium chrysogenum Wisconsin 54-1255] Length = 367 Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 24/214 (11%), Positives = 52/214 (24%), Gaps = 17/214 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALK----CFAAWGMFDTLNQYMDGTTS 57 + TP + D + N+ + G+ + LK A M + Sbjct: 13 LDTPSMIADLDLVEANIKKLMDKLLPTGLDIRPHLKTTKSAILADKMVKAGAKGGCVA-K 71 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEID----AVLSNCDTIIFNTVSQLNKFKDKAQK 113 S EV+ F + I+ ++ + Sbjct: 72 VSEAEVIAA-AGFDDLFITCEIIGPAKVQRLVELYRKHRKIRIVVDSEAGATAIDKALAA 130 Query: 114 LHKKIGLRINPSVSYSKFILADPNR-PFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 + + + P L + ++ ++G H + Sbjct: 131 AGIDEPISVLIDLDVGLHRTGVLPGDPAMTLARHVQGLKHLKLIGLHGYEGHLQHLHDKE 190 Query: 173 LCFSAMLKNI------EKEFGHFITQIEWISLGG 200 S L+++ IE ++ GG Sbjct: 191 DRRSQCLQSMATLTNTADVLRKAGFNIEVVTTGG 224 >gi|221633166|ref|YP_002522391.1| Alanine racemase, N-terminal domain family [Thermomicrobium roseum DSM 5159] gi|221156807|gb|ACM05934.1| Alanine racemase, N-terminal domain family [Thermomicrobium roseum DSM 5159] Length = 370 Score = 41.3 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 1/59 (1%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSS 58 ++ TP ++D +L NL + G+ L LK + + G T + Sbjct: 9 LLDTPCLVVDLDRLERNLAEMAEYARTHGLALRPHLKTHKTAEIARMQQAHGVVGFTCA 67 >gi|56460862|ref|YP_156143.1| amino acid aldolase or racemase [Idiomarina loihiensis L2TR] gi|56179872|gb|AAV82594.1| Predicted amino acid aldolase or racemase [Idiomarina loihiensis L2TR] Length = 375 Score = 41.3 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 22/269 (8%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-------DGT 55 TPY LID+ KL +N++ ++ G L TL Sbjct: 12 DTPYLLIDEAKLKSNINYLKQRVESLGSHLR------PHLKTLRTLEAAGYLLDSKSAPA 65 Query: 56 TSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQLNKFKDK 110 T S+L E + K G Y V ++ V I+ + ++Q D Sbjct: 66 TVSTLAEAE-AYAKAGYTDLLYAVGIAPAKLKRVAALRQQGINLHILLDNITQAQAVVDY 124 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-FHNNCEN 169 A + + + I + + + + + + + + G + Sbjct: 125 AAEFGQDFSVFIEIDSDDHRGGIKPSDSKLLTIAKTLGEHFTGLMTHAGGSYACNTEQGL 184 Query: 170 KSFLCFSAM-LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228 K+F ++ S+ G D + + + Sbjct: 185 KNFAKQECDAVRIARNNLETAGIHCAITSV-GSTPTAHFGEDFSDISEVRAGVYTTFDLV 243 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKN 257 + ++ TTV+ ++ Sbjct: 244 MKNIGVCDFSHIAMSVVTTVIGHNKEKNW 272 >gi|210621786|ref|ZP_03292815.1| hypothetical protein CLOHIR_00760 [Clostridium hiranonis DSM 13275] gi|210154550|gb|EEA85556.1| hypothetical protein CLOHIR_00760 [Clostridium hiranonis DSM 13275] Length = 388 Score = 41.3 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 51/393 (12%), Positives = 104/393 (26%), Gaps = 57/393 (14%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLN----QYMDGTTSSSL 60 ID NL + + N G K+ +K A + + TL +Y+ + + Sbjct: 15 IDLDAFKRNLKSIRKVLNN-GEKICGIVKADAYGHGSVEIAKTLEENDVEYLAVSRAEEA 73 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + Y + ++ N ++ K + A++L + Sbjct: 74 MELRRKGLELPILILGYTP---EQRYRDIIRNDVMFTIYSMEDAVKLNEAAEELEMDAKV 130 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 I + + + K E + ++ G+ F E Sbjct: 131 HIKID----TGMNRLGFKVTEESICEIKKISEMDRISIKGIFTHFAAADEVDKSFTEMQG 186 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 K + ++ + D D D + Y ++ Sbjct: 187 EKFKYMLNRLKEEGVEVPLVHAANSAAIVDCDDLKFDMVRAGIIMYGCYPSDDIMK-ERV 245 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYLLYQESATIYPNTGP---- 287 V T+ T V I I + + + P Sbjct: 246 PVEPVMTIKTRVSHIKTIEPGEKISYGCTYEAKEKERIATLAIGYADGFVRGRKNPKVCI 305 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF----------- 334 V GR C+ + + + +K+GD G + F Sbjct: 306 NGKDYEVVGRICMDQCMI-KIGMDDDIKVGDEAVVFGKGG---VSISEFAEDCGTISHEI 361 Query: 335 ---NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364 +P + +++ D I+ Y+DY Sbjct: 362 MCNISRRIPRVFIEHED----IIK---YDDYLR 387 >gi|227328089|ref|ZP_03832113.1| hypothetical protein PcarcW_12445 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 387 Score = 41.3 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 39/134 (29%), Gaps = 7/134 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSL 60 ++TP+ LID+ + N+D + G ++ LK + L T S+L Sbjct: 10 LETPFLLIDEFRFQRNIDRLYQRTEKLGSQIRPHLKTLRSIEAGRYLLKDAASPATVSTL 69 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V + I+ ++ Q D A Sbjct: 70 AEAE-AFANVGYTNLLYAVGIAPHKLPRIANLIHKGVNVHILLDSAEQARAVTDFALANS 128 Query: 116 KKIGLRINPSVSYS 129 + I Sbjct: 129 VTFSVFIEIDCDGH 142 >gi|330972501|gb|EGH72567.1| alanine racemase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 378 Score = 41.3 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 5/133 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ +N+ GV+L +K + + G T S+L Sbjct: 8 LDTPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A + + C I+ ++V+ Q + Sbjct: 68 KEAEHCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVAAARAIAVFGQAHDE 127 Query: 117 KIGLRINPSVSYS 129 + + I Sbjct: 128 RFDVWIEIDCDGH 140 >gi|66046627|ref|YP_236468.1| alanine racemase, N-terminal [Pseudomonas syringae pv. syringae B728a] gi|63257334|gb|AAY38430.1| Alanine racemase, N-terminal [Pseudomonas syringae pv. syringae B728a] Length = 378 Score = 41.3 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 5/133 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP L+D ++ +N+ GV+L +K + + G T S+L Sbjct: 8 LDTPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A + + C I+ ++V+ Q + Sbjct: 68 KEAEHCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVAAARAIAVFGQAHDE 127 Query: 117 KIGLRINPSVSYS 129 + + I Sbjct: 128 RFDVWIEIDCDGH 140 >gi|91976729|ref|YP_569388.1| alanine racemase-like [Rhodopseudomonas palustris BisB5] gi|91683185|gb|ABE39487.1| alanine racemase-like [Rhodopseudomonas palustris BisB5] Length = 360 Score = 41.3 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 2/88 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 I TP +ID ++ N+ + AGV +K + + + G T + Sbjct: 13 IGTPALVIDMDRVERNIARVQALCDAAGVANRPHIKTHKSPLLAQMQIAAGARGITCQKI 72 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEID 87 E + +YN+ ++ Sbjct: 73 GEAEVMADAGIDDILISYNLIGEEKMAR 100 >gi|153831634|ref|ZP_01984301.1| metal-activated pyridoxal enzyme [Vibrio harveyi HY01] gi|148872144|gb|EDL70961.1| metal-activated pyridoxal enzyme [Vibrio harveyi HY01] Length = 368 Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 21/209 (10%), Positives = 52/209 (24%), Gaps = 18/209 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 ++TP +D K+ N+ + G+ L K + G + L Sbjct: 6 LETPSLFVDIDKMKTNIKAMQQRINDLGLTLRPHTKAHKIPAIAQMQLDAGAQGICVAKL 65 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQK 113 E + +A + + + D + + + + A Sbjct: 66 GEAEVMAQGGIKDILITTPIAGQKKIQRLITLHQDHPDARFIQVIDDYYHVVEIAKAASA 125 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--KNVNGLMFHNNCENKS 171 + + L I R ++G+ I + V+ + + Sbjct: 126 ANLCVELMIEVESG--------QQRCGVQVGDDLVQLIHAIQITDGVSYVGLQAYSGHLQ 177 Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGG 200 + + + +L Sbjct: 178 HVKGYCSRNEQARSVVVPLFDFITSTLEP 206 >gi|169628346|ref|YP_001701995.1| hypothetical protein MAB_1253c [Mycobacterium abscessus ATCC 19977] gi|169240313|emb|CAM61341.1| Conserved hypothetical protein (alanine racemase?) [Mycobacterium abscessus] Length = 360 Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 14/132 (10%), Positives = 38/132 (28%), Gaps = 6/132 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP+ +D + N++ + G++L K + G T +++ Sbjct: 13 LDTPFLAVDLAVMDRNIERLAGRLRGTGIRLRPHAKSHKCIEIARRQIDSGAIGLTVATV 72 Query: 61 YEVML-GHEKFGGETHAY----NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + F AY + ++ + + + L Sbjct: 73 GEAEVFAEAGFIDLFIAYPLWVTAQKARRLRQVASRAALRVAVDSAAGAQQLAEHLGDLP 132 Query: 116 KKIGLRINPSVS 127 + + ++ Sbjct: 133 ITVVIEVDSGHH 144 >gi|145296605|ref|YP_001139426.1| hypothetical protein cgR_2513 [Corynebacterium glutamicum R] gi|140846525|dbj|BAF55524.1| hypothetical protein [Corynebacterium glutamicum R] Length = 380 Score = 41.3 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 2/101 (1%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59 MI TP LID+++L N+ G+ L +K + G T ++ Sbjct: 39 MIDTPAVLIDRERLTANIFKMAAHAAANGIALRPHVKTHKIIEIAQMQVDAGARGITCAT 98 Query: 60 LYEVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN 99 + E + F AY + D + + + I Sbjct: 99 VGEAEIFAGAGFTDIFIAYPLYLTDHAVQRLNAIPGAISIG 139 >gi|126733774|ref|ZP_01749521.1| threonine aldolase [Roseobacter sp. CCS2] gi|126716640|gb|EBA13504.1| threonine aldolase [Roseobacter sp. CCS2] Length = 387 Score = 41.3 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 19/124 (15%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP ++D L N+ K+ G++ + K +++ +D Sbjct: 27 IQTPCLVLDLDALERNIKKMGDFAKSHGMRHRVHGK----------MHKSVDVA------ 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L EK GG + E+ A D ++ N V Q K A+ Sbjct: 71 ---LLQEKLGGSVGVCCQKVSEAEVFARGGIKDVLVSNQVRQPEKIDRLARLPKLGARAI 127 Query: 122 INPS 125 Sbjct: 128 CCVD 131 >gi|163731488|ref|ZP_02138935.1| threonine aldolase [Roseobacter litoralis Och 149] gi|161394942|gb|EDQ19264.1| threonine aldolase [Roseobacter litoralis Och 149] Length = 387 Score = 41.3 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 19/124 (15%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP ++D L N+ K+ G++ + K +++ +D Sbjct: 27 IQTPCLVLDLDALERNIKKMGDFAKSHGMRHRVHGK----------MHKSVDVA------ 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L E+ GG + E+ A D ++ N V Q K A+ Sbjct: 71 ---LLQEELGGSVGVCCQKVSEAEVFARGGIKDVLVSNQVRQPEKIDRLARLPKLGARAI 127 Query: 122 INPS 125 Sbjct: 128 CCVD 131 >gi|297172025|gb|ADI23009.1| predicted amino acid aldolase or racemase [uncultured Planctomycetales bacterium HF0500_40D21] gi|297183364|gb|ADI19499.1| predicted amino acid aldolase or racemase [uncultured Planctomycetales bacterium HF0500_40D21] Length = 367 Score = 41.3 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 45/328 (13%), Positives = 78/328 (23%), Gaps = 23/328 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTS--S 58 + TP ID + N+ G + KC + G T Sbjct: 14 LDTPSLCIDLDVMEANISRMASFMAERGKQWRPHEKCHKTPEIAHRQRAAGAIGVTCAKV 73 Query: 59 SLYEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 S EVM + I + +Q + Sbjct: 74 SEAEVMAAGGITDILVANMIVGAPKVQRVARLCETADPIIALDHFAQAQPLAAACHEAGV 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175 + + +V + P R L ++ + G H Sbjct: 134 TCRVILEINVG-LDRVGVLPGRDAIELARATAQLDGLQLVGIMGYEGHLLRVEDPDEKRT 192 Query: 176 -----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 +L+ + +S GG + Sbjct: 193 LINASMRLLEETRDAMRDEGLCCDIVSAGGT-GSYQFTSDCPAITELQAGGGIFADPVYQ 251 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290 L+ G + T+ TV +S KN ++DS + PD L + G Sbjct: 252 LQMGVTGLEYGLTVLATV--VSRPEKNRAVLDSGRKTLSPDAHL----PLVKDYPGTEVV 305 Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRI 318 + C E + IGD++ Sbjct: 306 RMSAEHCELS--LVEDS--VDLTIGDKV 329 >gi|270159139|ref|ZP_06187795.1| putative metal-activated pyridoxal enzyme [Legionella longbeachae D-4968] gi|289166027|ref|YP_003456165.1| alanine racemase [Legionella longbeachae NSW150] gi|269987478|gb|EEZ93733.1| putative metal-activated pyridoxal enzyme [Legionella longbeachae D-4968] gi|288859200|emb|CBJ13132.1| putative alanine racemase [Legionella longbeachae NSW150] Length = 374 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 23/200 (11%), Positives = 48/200 (24%), Gaps = 11/200 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALY--IRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSS 58 + TP +IDK L NL+ I +K K + +Y G + Sbjct: 13 LDTPCLVIDKNILKTNLEKMKKHGIENEINIKPH--CKTHKCSKLAGLQIEYGAIGVCVA 70 Query: 59 SLYEVM-LGHEKFGGETH---AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 + E L E+ I + T++ + ++A Sbjct: 71 KISEAEVLIKEEIPNILITSPVITKNKISRLIACLEKAPSTMVVVDSKENILALNEA-GA 129 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + + + + + V N SF Sbjct: 130 RHNKRIHVLLDIDPGIGRTGIKPEHALNFARELQRLPWLHLMGVQCYA-GNLQHIPSFNE 188 Query: 175 FSAMLKNIEKEFGHFITQIE 194 + + ++ Sbjct: 189 RRERSLQTMQMASEVVKNLK 208 >gi|332160780|ref|YP_004297357.1| hypothetical protein YE105_C1158 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604662|emb|CBY26160.1| protein containing an Alanine Racemase Domain [Yersinia enterocolitica subsp. palearctica Y11] gi|325665010|gb|ADZ41654.1| hypothetical protein YE105_C1158 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860399|emb|CBX70708.1| uncharacterized protein yhfX [Yersinia enterocolitica W22703] Length = 391 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 76/307 (24%), Gaps = 19/307 (6%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYM-DGTTSSSLYEVM 64 Y+ID ++ N L G+ L L K F + L + G + EV Sbjct: 31 YVIDVDQVKQNARLLLETATRYGITLYLMSKQFGRNPLLCKLLLECGYQGIVAVDFKEVR 90 Query: 65 LGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 ++ H ++ + V + I ++ + + A + +K+ L + Sbjct: 91 QLYQYNLPVAHVGHLVQIPSAMVDEVVSRQPEVITVYSIDKAREIAAAAVRQNKEQALLL 150 Query: 123 NPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIKNVNG-LMFHNN-----CENKSFLCF 175 L ++ + G F Sbjct: 151 KVCHHGDLVYPGQEAGFSLDELPTVIREIKTIPGIRLVGVTHFPCMLFDNEKGKTLPSRN 210 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + L + Q+E ++ K + +PG Sbjct: 211 LSTLIEAKSILEQQGIQVEQVNGPSATGVESLPQLAKWGVTHAEPGHSLTGTMPSNQPGN 270 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295 T V ++ H+ + L+Y + + V Sbjct: 271 QPEHVAMLYLTEVSHCHQDKSYCYGGGYYRRGHLSNALVYDQQW--------HATNVVSP 322 Query: 296 SCLAGDI 302 + + D Sbjct: 323 ANDSIDY 329 >gi|224814618|gb|ACN65507.1| arginine decarboxylase 2 [Oryza sativa Japonica Group] Length = 629 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 27/273 (9%), Positives = 66/273 (24%), Gaps = 42/273 (15%) Query: 12 QKLLNNLDTALYIRKNAGVKLLLAL--------------KCFAAWGMFDTLNQYMD---- 53 L N LD+ A A K + L + Sbjct: 76 DVLKNRLDSLHAAFHGAVDSTGYASRYQGVFPIKVNQNKKVNQNKAVVQDLVTFGHGYSY 135 Query: 54 GTTSSSLYEVMLG---HEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQL 104 G + S E+++ K + YKD + A + I+ +L Sbjct: 136 GLEAGSKPELLIAMSCLAKAKPGAYLVCNGYKDADYVALALSARAMGLNAIIVLEMEEEL 195 Query: 105 NKFKDKAQKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDK--------IESEI 155 + +++ +L + + + + + G ++ Sbjct: 196 DIVVEQSARLGVEPVIGVRAKLLTKIPGHFGSTAGKHGKFGMLADKIYEVAGKLKKMGKL 255 Query: 156 KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ-----IEWISLGGGIHFTDKDYP 210 + L +H + + + + + + GGG+ Sbjct: 256 HWLKLLHYHVGSMIPTTDIVYNAAAEAAGIYCALVKEHGATGMTTLDCGGGLGVDYDGTR 315 Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 + E+Y+ ++ + Sbjct: 316 SGSSDMSVAYGLEQYA-SSIVQAVRLTCDDNGV 347 >gi|255020460|ref|ZP_05292525.1| alanine racemase [Acidithiobacillus caldus ATCC 51756] gi|254970070|gb|EET27567.1| alanine racemase [Acidithiobacillus caldus ATCC 51756] Length = 365 Score = 41.3 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 95/336 (28%), Gaps = 27/336 (8%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA---WGMF--DTLNQYMDGTTSSSLYE 62 I L +N+ A + G KL+ A+K A + + ++G +S+ E Sbjct: 8 CISASALAHNVAVAR--ARMPGAKLMAAVKANAYGHGLAVCAPELARAGVEGFAVASMEE 65 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 ++ G + EI + ++ + +QL +++ I ++ Sbjct: 66 AEQLYDLALGPSACLLAGPFAPGEIPLAAARGHILVIHRAAQLAWLQEQRWNRPLSIWIK 125 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + F + F L ++S ++ + + + + + ++ Sbjct: 126 FDSGMHRLGFAPSALGPVFEALA-----AVQSPLRILGLMSHLARSDTPNDPHNTRQIRE 180 Query: 182 IEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFCQRLK---EFSEKYSVQIYLEPG 234 G + + + G + + +P L F + + L P Sbjct: 181 FRAAIGQWGERTLGEHSLANSGAVLALGEARFPWMRPGLMLYGLSPFPGQTGRDLGLRPV 240 Query: 235 EAIVTNTTTLNTT-----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289 + + + V D G Sbjct: 241 LSWQAQIIATRRLAPGEWLGYGAAYQAPHEQRVGVVACGYGDGFDRHLGQGAPVWIGSQR 300 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 + GR + D+ + + GD ++ V Sbjct: 301 SQTLGRV--SMDLLFVDLQDSDAQEGDWVTLMGVGA 334 >gi|110635638|ref|YP_675846.1| alanine racemase-like [Mesorhizobium sp. BNC1] gi|110286622|gb|ABG64681.1| alanine racemase-like protein [Chelativorans sp. BNC1] Length = 388 Score = 41.3 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 36/137 (26%), Gaps = 13/137 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57 I+TP ++D L N+ + G++ K + + + G Sbjct: 28 IQTPCLILDLDALERNIKKMGDYARAHGMRHRAHGKMHKSVDVLKLQMELGGAIGVCCQK 87 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKA 111 S EV F + + +D + + + + A Sbjct: 88 VSEAEV-FARAGF--KDILVSNQVRDAAKIDRLAKLPAYGARVIVCVDDPANVADLSAAA 144 Query: 112 QKLHKKIGLRINPSVSY 128 QK I + Sbjct: 145 QKHGTVIECFVEIDCGA 161 >gi|326406390|gb|ADZ63461.1| alanine racemase [Lactococcus lactis subsp. lactis CV56] Length = 367 Score = 40.9 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 21/184 (11%), Positives = 56/184 (30%), Gaps = 9/184 (4%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63 ++D + + NN++ ++ A+K A + + ++ + G S+L E Sbjct: 12 IVDLKAIRNNIEKFKKHIH-PNAEIWPAVKADAYGHGSVEVSKAVSDLVGGFCVSNLDEA 70 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + ++D + ++ + L K Q+ + L+I+ Sbjct: 71 IELRNHLVTKPILVLSGIVQEDVDIAAALNISLTAPS---LEWLKLVVQEEAELSDLKIH 127 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 V + + + + DK + + F + + Sbjct: 128 IGVDSGMGRIGIRDVEEANQMIELADKYAINFEGI-FTHFATADMADDTKFKDQQARFNK 186 Query: 184 KEFG 187 G Sbjct: 187 IMAG 190 >gi|326317869|ref|YP_004235541.1| alanine racemase domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374705|gb|ADX46974.1| alanine racemase domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 377 Score = 40.9 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 50/180 (27%), Gaps = 11/180 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID Q++ N+ + GV+ K + + G T S+L Sbjct: 7 LGTPSALIDTQRMERNIRRMQDRMQAMGVRFRPHAKTTKCLPVVQAQIAAGAQGITVSTL 66 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQLNKFKDKAQKLH 115 E E G + Y V ++ II ++V+ + Sbjct: 67 KEAEQFFEA-GIQDILYAVGMVPGKLGQALALRQRGCQLKIITDSVAAAREIGR--FGAA 123 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 + + + L + + + V G++ H Sbjct: 124 HGAVFEVWIEIDTDGHRSGIKPEEDALL--QVANVLRDAGMVVGGVLAHAGSSYDHDDPQ 181 >gi|327393933|dbj|BAK11355.1| hypothetical protein PAJ_1275 [Pantoea ananatis AJ13355] Length = 388 Score = 40.9 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 55/196 (28%), Gaps = 5/196 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSL 60 I TPY L+DK K N++ + ++ LK L T S+L Sbjct: 19 ITTPYLLLDKVKFERNINRLYQRIEGQRCQIRPHLKTLRTLQSAPYLLKASSSPATVSTL 78 Query: 61 YEVML-GHEKFGGETHAYNVAYKDCEIDAVLSN---CDTIIFNTVSQLNKFKDKAQKLHK 116 E F +A +A A L ++ ++++Q D A + Sbjct: 79 AEAEAFVAAGFSNVLYAVGIAPAKLPRIAALRCSGKQVHVLLDSMAQAQAISDYALQHQV 138 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + I + + + + + + +C + + Sbjct: 139 TFSVFIEIDCDGHRGGIRPEDETLAEIAGHLHQHGMVVEGVMTHAGESYHCRTPQDIQRA 198 Query: 177 AMLKNIEKEFGHFITQ 192 A + + Sbjct: 199 AQQECQAVITAAQHIR 214 >gi|110680093|ref|YP_683100.1| threonine aldolase [Roseobacter denitrificans OCh 114] gi|109456209|gb|ABG32414.1| threonine aldolase [Roseobacter denitrificans OCh 114] Length = 387 Score = 40.9 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 19/124 (15%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP ++D L N+ K G++ + K +++ +D Sbjct: 27 IQTPCLVLDLDALERNIKKMGDFAKAHGMRHRVHGK----------MHKSVDVA------ 70 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L E+ GG + E+ A D ++ N V Q K A+ Sbjct: 71 ---LLQEELGGSVGVCCQKVSEAEVFARGGIKDVLVSNQVRQPEKIDRLARLPKLGARAI 127 Query: 122 INPS 125 Sbjct: 128 CCVD 131 >gi|126737976|ref|ZP_01753706.1| hypothetical protein RSK20926_20082 [Roseobacter sp. SK209-2-6] gi|126721369|gb|EBA18073.1| hypothetical protein RSK20926_20082 [Roseobacter sp. SK209-2-6] Length = 382 Score = 40.9 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 2/84 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60 + TP ++D+ K+ N+ + GV L LK + + + G T S+L Sbjct: 11 LPTPSLVVDEAKMRRNIKRQEKRVQALGVTLRPHLKTVKSVDIARQMLTGGTGPATVSTL 70 Query: 61 YEVMLGHEKFGGETHAYNVAYKDC 84 E G Y V Sbjct: 71 EEAE-IFAAAGIRDIIYAVGIVPQ 93 >gi|89256641|ref|YP_514003.1| alanine racemase [Francisella tularensis subsp. holarctica LVS] gi|167011039|ref|ZP_02275970.1| alanine racemase [Francisella tularensis subsp. holarctica FSC200] gi|254367956|ref|ZP_04983976.1| alanine racemase [Francisella tularensis subsp. holarctica 257] gi|122500527|sp|Q2A2P9|ALR_FRATH RecName: Full=Alanine racemase gi|89144472|emb|CAJ79777.1| alanine racemase [Francisella tularensis subsp. holarctica LVS] gi|134253766|gb|EBA52860.1| alanine racemase [Francisella tularensis subsp. holarctica 257] Length = 365 Score = 40.9 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64 I KQ L NN+ K+ +K A + + + +D ++ E Sbjct: 6 ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + V Y + I+ ++S + + K + A++L KK+ IN Sbjct: 64 RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEYIEKLEQIAKELDKKVYAHINI 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + ++ + + + ES+ + G+ H C + + K Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173 >gi|169656659|ref|YP_001428845.2| alanine racemase [Francisella tularensis subsp. holarctica FTNF002-00] gi|290953541|ref|ZP_06558162.1| alanine racemase [Francisella tularensis subsp. holarctica URFT1] gi|295313145|ref|ZP_06803827.1| alanine racemase [Francisella tularensis subsp. holarctica URFT1] gi|189027647|sp|A7ND36|ALR_FRATF RecName: Full=Alanine racemase gi|164551727|gb|ABU61889.2| alanine racemase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 365 Score = 40.9 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64 I KQ L NN+ K+ +K A + + + +D ++ E Sbjct: 6 ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + V Y + I+ ++S + + K + A++L KK+ IN Sbjct: 64 RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEYIEKLEQIAKELDKKVYAHINI 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + ++ + + + ES+ + G+ H C + + K Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173 >gi|86139515|ref|ZP_01058083.1| threonine aldolase, low-specificity [Roseobacter sp. MED193] gi|85823698|gb|EAQ43905.1| threonine aldolase, low-specificity [Roseobacter sp. MED193] Length = 388 Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 59/214 (27%), Gaps = 17/214 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57 I+TP ++D L N+ K G++ K + + + G Sbjct: 27 IQTPALVLDLDALERNIKKMGDYAKAHGMRHRAHGKMHKSVDVLKLQMEIGGAIGVCCQK 86 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLS------NCDTIIFNTVSQLNKFKDKA 111 S EV E N +I ++ + + V+ + A Sbjct: 87 VSEAEV-FARAGI-KEILVSNQVRDPGKIARLVQLPKFSGGEVIVCVDDVASVADLSSAA 144 Query: 112 QKLHKKIGLRINPSVSY--SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169 + ++G+ I ++ + I+ G M H + + Sbjct: 145 KNAGTELGVFIEIDCGAGRCGVTTTPAVVEIAKAVVAADNLTYRGIQAYQGAMQHMDSFD 204 Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGG 200 +++ + + +S GG Sbjct: 205 DRKAKIDTAIRQVQDAVNALKDEGIETDLVSGGG 238 >gi|253688636|ref|YP_003017826.1| alanine racemase domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755214|gb|ACT13290.1| alanine racemase domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 380 Score = 40.9 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 7/134 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSL 60 ++TP+ LID+ + N+D + G ++ LK + L T S+L Sbjct: 10 LETPFLLIDEFRFQRNIDRLYQRTEALGSRVRPHLKTLRSIEAGRYLLKDANSPATVSTL 69 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLNKFKDKAQKLH 115 E K G Y V ++ + + I+ ++ Q D A+ Sbjct: 70 AEAE-AFAKAGYTNLLYAVGIAPHKLPRIANLIRNGVNIHILLDSAEQAQAVVDFARANS 128 Query: 116 KKIGLRINPSVSYS 129 + I Sbjct: 129 VTFSVFIEIDCDGH 142 >gi|254249069|ref|ZP_04942389.1| Alanine racemase [Burkholderia cenocepacia PC184] gi|124875570|gb|EAY65560.1| Alanine racemase [Burkholderia cenocepacia PC184] Length = 376 Score = 40.9 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 87/323 (26%), Gaps = 33/323 (10%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ N+ GV+ +K + D + G T S+L Sbjct: 6 LNTPAALIDVARMQRNIARMQTHLDALGVRFRPHVKTTKCRQVVDVQIAAGAQGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V ++ I+ +++ + A Sbjct: 66 KEAEQFFAH-GIRDIVYAVDMVPAKLGQALALRRQGCDLKIVADSLPAAHAI--AAFGRE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF--- 172 + V P P + L + + G++ H + Sbjct: 123 HGERFDVWIEVDVDGHRSGIP--PDADLLIDVGRALTDGGMLLGGVLAHAGSSYEYDTPE 180 Query: 173 ------LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + +S+G P +RL +E + Sbjct: 181 ALAAIAEQERSRTVRAAERLRAAGLPCPVVSIGST--------PTALAAERLDGVTEVRA 232 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 L + ++ N + + +S + + A + D S Sbjct: 233 GVYVL--FDLVMHNVGVCELSDIALSVLTTVIGHQEEKGWA-IVDAGWMAMSRDRGTQRQ 289 Query: 287 PYTAMVCGRSC-LAGDIFGEFHF 308 G+ C AGD+ G++ Sbjct: 290 ARDFG-YGQICTEAGDVLGDYLL 311 >gi|260430565|ref|ZP_05784538.1| metal-activated pyridoxal enzyme [Citreicella sp. SE45] gi|260418594|gb|EEX11851.1| metal-activated pyridoxal enzyme [Citreicella sp. SE45] Length = 387 Score = 40.9 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 20/199 (10%), Positives = 55/199 (27%), Gaps = 19/199 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMD-GTTSSS 59 I+TP ++D L N+ + G++ + K + + + G Sbjct: 27 IQTPCLVLDLDALERNIRKMGDYARAHGMRHRVHGKMHKSVDVAKLQMRLGGAIGVCCQK 86 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQKL 114 + E + + N +ID + + + ++ + + + AQ+ Sbjct: 87 VSEAEVFVRGGIKDVLVSNQVRDPQKIDRLAGLPKLGAKIIVCVDDLANVAELSEAAQRH 146 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + R G + + + ++ +++ Sbjct: 147 GTTLECFVEIDCGA------------GRCGVTTAEAVVEIAQAIDAAEGLRFTGIQAYQG 194 Query: 175 FSAMLKNIEKEFGHFITQI 193 L + E I Sbjct: 195 AMQHLDSYEARRDKLNAAI 213 >gi|115315060|ref|YP_763783.1| alanine racemase [Francisella tularensis subsp. holarctica OSU18] gi|122324934|sp|Q0BL88|ALR_FRATO RecName: Full=Alanine racemase gi|115129959|gb|ABI83146.1| alanine racemase [Francisella tularensis subsp. holarctica OSU18] Length = 365 Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64 I KQ L NN+ K+ +K A + + + +D ++ E Sbjct: 6 ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124 + V Y + I+ ++S + + K + A++L KK+ IN Sbjct: 64 RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEYIEKLEQIAKELDKKVYAHINI 122 Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 + ++ + + + ES+ + G+ H C + + K Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173 >gi|268591426|ref|ZP_06125647.1| alanine racemase [Providencia rettgeri DSM 1131] gi|291313080|gb|EFE53533.1| alanine racemase [Providencia rettgeri DSM 1131] Length = 360 Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 21/211 (9%), Positives = 65/211 (30%), Gaps = 10/211 (4%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63 LI+++ L +NL I N+ + + +K A G+ + + +DG + L E Sbjct: 7 LINRRALRHNLQRVKEIAPNSQMIAV--VKANAYGHGLVGVGQAVEELVDGFGVARLNEA 64 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 +L + + + + ++ + I + + + + + L++ Sbjct: 65 LLLRQHGVIKPIVLLEGFFEQSDLLLM--AEHQIDTVIHCIEQLEML-EATKLPYPLKVW 121 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + L + + + + +N + + + + Sbjct: 122 MKLDTGMHRLGILPKDAEGF-YQRLQRCQQVQLPINIVSHFCQADAPHLPTTEKQIACFK 180 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDF 214 + + + G + + + Y Sbjct: 181 QFIDGKEGEKSIAASAGILLWPEAHYDWVRP 211 >gi|254517892|ref|ZP_05129948.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226911641|gb|EEH96842.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 387 Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 31/275 (11%), Positives = 70/275 (25%), Gaps = 12/275 (4%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYM-DGTTSSSLYEVM 64 Y+ID L+ N G+KL K + + DG E Sbjct: 31 YVIDLDTLIENAKKLKDEADKYGIKLYFMTKQIGRNPLICKEFMKLGYDGAVVVDFKEAE 90 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + H ++ + S D I ++ + + + ++L+ K + + Sbjct: 91 VMIDNGIKIGHVGHLVQIPKALIEKVVKSRPDYITVYSIEKAKEINEVCERLNIKQNIML 150 Query: 123 N----PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN----NCENKSFLC 174 YS +G + + V + E K Sbjct: 151 RVLGENDNLYSGQYGGFKLNELKSIGSELVKLKNLNLAGVTSFPCFLFDEESNEIKRTNN 210 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + + E F +IE +++ ++ + Y + Sbjct: 211 IDTIKEAKEILEKEFNIKIEQLNMPSATCVNSIKKIHEEGGTHGEPGHGLTGSTPYHKFN 270 Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269 + + V + +H+ Sbjct: 271 DGDELPAMVYVSEVSHNLLDRAYCYGGGHYRRSHM 305 >gi|52081132|ref|YP_079923.1| putative alanine racemase [Bacillus licheniformis ATCC 14580] gi|52786510|ref|YP_092339.1| hypothetical protein BLi02775 [Bacillus licheniformis ATCC 14580] gi|319644904|ref|ZP_07999137.1| hypothetical protein HMPREF1012_00170 [Bacillus sp. BT1B_CT2] gi|52004343|gb|AAU24285.1| putative alanine racemase [Bacillus licheniformis ATCC 14580] gi|52349012|gb|AAU41646.1| putative protein [Bacillus licheniformis ATCC 14580] gi|317392713|gb|EFV73507.1| hypothetical protein HMPREF1012_00170 [Bacillus sp. BT1B_CT2] Length = 368 Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 20/195 (10%), Positives = 54/195 (27%), Gaps = 10/195 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP LIDK +L+N+ V L K + + G + + Sbjct: 6 LDTPALLIDKDVMLSNMKDMQNYANEQKVSLRPHTKTHKMPKLAKLQEEMGAVGIAVAKV 65 Query: 61 YEVM-LGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E + A + + + + ++ Q+ + ++ + K Sbjct: 66 GEAEVMARNGLKDIFIANEIVGKSKLERIRKLSETIDISFGIDSAYQVREIEEVFEGASK 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 K + + V + + + G+ F ++ + + Sbjct: 126 KAQVLVEIEVGE----QRSGIIEEDDFRTLLELIKTCQNVELKGI-FSHDGHSYKAKSVA 180 Query: 177 AMLKNIEKEFGHFIT 191 + ++ + Sbjct: 181 HCKELYKESVERTLH 195 >gi|119963284|ref|YP_946033.1| alanine racemase N-terminal domain-containing protein [Arthrobacter aurescens TC1] gi|119950143|gb|ABM09054.1| putative alanine racemase, N-terminal domain protein [Arthrobacter aurescens TC1] Length = 366 Score = 40.9 bits (94), Expect = 0.34, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 2/77 (2%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYE 62 TP LID L N++ + G++L +K + L G T +++ E Sbjct: 10 TPAVLIDVDVLDRNIERMAGNMRGRGLQLRPHVKTHKTLEIARKQLAAGALGITVATIGE 69 Query: 63 VML-GHEKFGGETHAYN 78 + + A+ Sbjct: 70 AEVFAADGVKDIFIAFP 86 >gi|149922547|ref|ZP_01910977.1| diaminopimelate decarboxylase [Plesiocystis pacifica SIR-1] gi|149816574|gb|EDM76069.1| diaminopimelate decarboxylase [Plesiocystis pacifica SIR-1] Length = 814 Score = 40.9 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 22/217 (10%), Positives = 51/217 (23%), Gaps = 19/217 (8%) Query: 9 IDKQKLLNNL--DTALYIRKNAGVKLLLALKCF--AAWGMFDTLNQYMDGTTSSSLYEVM 64 +D + + ++ + A K + G +SL E+ Sbjct: 95 VDAALERERVLVEALQRSVGELPLRNMAAFKANHSSLLQFARVQADAGAGVEVASLPELY 154 Query: 65 LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + + F + ++ G+ Sbjct: 155 TALCVGVRPGAVVFGNTNLNARELLIAMHLGVTAFCFDHPAKLARVLDCARTREGGVARL 214 Query: 124 PSVSYSKFILADPNRPFSRLGEKCK----------DKIESEIKNVNGLMFHNNCENKSFL 173 + A R G D++ + + G+ FH +S Sbjct: 215 RPLLRLAAPYASAALSMERFGLDVDKSPGLLEAVLDRLAAAGSALTGVSFHVGIGARSTA 274 Query: 174 CFSAML----KNIEKEFGHFITQIEWISLGGGIHFTD 206 + + + +GGG+ F D Sbjct: 275 VYEQVFAQAEAVFAAAKARTGVAPWIVDIGGGLGFDD 311 >gi|146275923|ref|YP_001166083.1| alanine racemase domain-containing protein [Novosphingobium aromaticivorans DSM 12444] gi|145322614|gb|ABP64557.1| alanine racemase domain protein [Novosphingobium aromaticivorans DSM 12444] Length = 393 Score = 40.9 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 2/84 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60 ++TP ++D ++ N+ GV L LK + + + +G T S+L Sbjct: 22 LETPCLVLDADRMDRNIARLRDRIAGLGVTLRPHLKTAKSVEVARRVMATSEGPATVSTL 81 Query: 61 YEVMLGHEKFGGETHAYNVAYKDC 84 E G Y V Sbjct: 82 KEAEF-FADAGVRDIIYAVGIAPW 104 >gi|86750314|ref|YP_486810.1| alanine racemase-like [Rhodopseudomonas palustris HaA2] gi|86573342|gb|ABD07899.1| Alanine racemase-like [Rhodopseudomonas palustris HaA2] Length = 360 Score = 40.5 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 22/205 (10%), Positives = 51/205 (24%), Gaps = 11/205 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 I TP +ID ++ N+ + AGV +K + + + G T L Sbjct: 13 IGTPALVIDMDRVERNIARVQGLCDAAGVANRPHIKTHKSPLLAQMQIKAGARGITCQKL 72 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCD---TIIFNTVSQLNKFKDKAQKLHK 116 E + +YN+ ++ + + + + A + + Sbjct: 73 GEAEVMAEAGIDDILISYNLIGEEKMARLGALHERAQMIVAADNEVVIAGLPAAAARAGR 132 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 +G+ + + + + + + Sbjct: 133 PLGVVVECDTG------RQRAGVETPAEAIALARTIAASDGLVFKGLMLYPTEDGWPQAQ 186 Query: 177 AMLKNIEKEFGHFITQIEWISLGGG 201 E +S GG Sbjct: 187 RFFDEALAGIRAHGLDAEIVSTGGS 211 >gi|148273757|ref|YP_001223318.1| putative alanine racemase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831687|emb|CAN02656.1| putative alanine racemase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 566 Score = 40.5 bits (93), Expect = 0.39, Method: Composition-based stats. Identities = 36/332 (10%), Positives = 74/332 (22%), Gaps = 25/332 (7%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA--------AWGMFDTLNQYMDGTTSSS 59 ++D + +N+ T + A + A+K A A + + + +S Sbjct: 19 VVDLDAIRHNVRTLAALAAPARTMV--AVKADAYGHGALQVARAALEAGAESLAVLDVAS 76 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E+ A+ AV + D + + + +L + + + Sbjct: 77 AVELR--RSGITARLLAWLHGVDTDFRVAVENGID-LGVSALWELERIAAAGRATGIRAR 133 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + + S+ P D + + + Sbjct: 134 VHLKADTGLSRNGATPELWPDLVRAAVAADAAGELTLHALWSHLADASPEDDDAALARFH 193 Query: 180 K----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + E + S G + D + S + Sbjct: 194 EAVRVAEELGARPVEKHLAASSAGIRLPAARFDMVRFGIAVYGISPFDDRSGRDLGLIPA 253 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPY-----T 289 + V L + V I Sbjct: 254 MTLEADVVSVKRVEAGHGVSYGLDHRTAGPSTLVLVPLGYADGIPRIAAPRASVLLNGRR 313 Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 V GR A D + PV++GD Sbjct: 314 FPVAGRI--AMDQLVLDVGDLPVEVGDTAVIL 343 >gi|307942316|ref|ZP_07657667.1| alanine racemase [Roseibium sp. TrichSKD4] gi|307774602|gb|EFO33812.1| alanine racemase [Roseibium sp. TrichSKD4] Length = 382 Score = 40.5 bits (93), Expect = 0.40, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 2/84 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60 ++TP ++D+ K++ N+ + GV L LK + + L G T S+L Sbjct: 11 LQTPALILDEAKMMRNIRRLASQVDSLGVSLRPHLKTVKSIEVARRLLTDGTGPATVSTL 70 Query: 61 YEVMLGHEKFGGETHAYNVAYKDC 84 E G + Y V Sbjct: 71 IEAE-VFAGAGIKDVIYAVGITPQ 93 >gi|17547428|ref|NP_520830.1| hypothetical protein RSc2709 [Ralstonia solanacearum GMI1000] gi|17429731|emb|CAD16416.1| putative ipr001608 alanine racemase, n-terminal protein [Ralstonia solanacearum GMI1000] Length = 376 Score = 40.5 bits (93), Expect = 0.41, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 78/322 (24%), Gaps = 31/322 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ N++ GV+ +K + L G T S+L Sbjct: 6 LNTPAALIDVARMTRNIERMQQRLDALGVRFRPHVKTTKCEPVVRAQLAAGAQGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V I+ ++V+ A Sbjct: 66 KEAEQ-FFSAGICDIVYAVGMAPARLPQALALRRRGCDLKIVADSVTCAQAI--AAFGGE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC- 174 + V P + + G++ H + Sbjct: 123 HGEAFDVWIEVDVDGHR--SGIAPDDDRLITVGRVLAEGGMRLGGVLAHAGSSYEYHAHD 180 Query: 175 --------FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + E +S+G ++ + + Sbjct: 181 ALVRIAELERSGCVRAAERLRAAGLPCETVSIG-STPTALSAEHLEGVTEVRAGVYVMFD 239 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 + ++ A+ ++ TTV+ E+ + D S Sbjct: 240 LVMHNVGVCALSDIALSVLTTVIGHQEDKGWA----------IVDAGWMAMSRDRGTQKQ 289 Query: 287 PYTAMVCGRSCLAGDIFGEFHF 308 P G++ GE+ Sbjct: 290 PRDFGYGLVCSEHGEVLGEYLM 311 >gi|330948109|gb|EGH48369.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 51 Score = 40.5 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 14/49 (28%), Gaps = 1/49 (2%) Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352 K V IGD + Y N + F P+ ++ Sbjct: 2 RRQPLKGVNIGDLLVLPLAGAYGYNISHADFLCHPRPSQHFVRNGERVR 50 >gi|119945753|ref|YP_943433.1| alanine racemase [Psychromonas ingrahamii 37] gi|119864357|gb|ABM03834.1| alanine racemase [Psychromonas ingrahamii 37] Length = 375 Score = 40.5 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 91/337 (27%), Gaps = 30/337 (8%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLL-ALKCFAAWGMFDTLNQYMDGT-----TSSSLY 61 +I L +N+ K AG + L A+K A + + +++ ++ L Sbjct: 12 IIHLDHLTHNMKVLQ---KKAGKRPLFPAIKANAYGHDAEIIAKHLISLGYTTLCTAHLS 68 Query: 62 EV-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E L + + + + + I+ ++ QL A++ K+I + Sbjct: 69 EAAELVEKGVNATFIILSPTLAENSDYLLDYDFQPIV-SSQVQLQALAQAARRRDKQITI 127 Query: 121 RINPSVSYS----------KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN- 169 + F+ +P +G C ++ N++ N Sbjct: 128 HVKVDTGMGRMGVRPDQLLMFLDECKAQPEIIIGGVCSHFPRADENNLSFSKTQINTFTA 187 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWIS---LGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + + +E + GI V L + S Sbjct: 188 LKKETKAYNIPLYHIANSAALFALEEAHLDAIRPGISIYGLKPSVSMVVPELNDLKPIMS 247 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 + + + +V +T + + I + I G Sbjct: 248 LVSRITLLKEVVQDTGISYGHLHYTDKPSLIATIPIGYGDGLSRSLSN-----RIEVLIG 302 Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 G C+ + V IGD + Sbjct: 303 NERCRQIGNICMDQCMIDVTQLRGKVSIGDEVVIIGT 339 >gi|306834227|ref|ZP_07467347.1| alanine racemase [Streptococcus bovis ATCC 700338] gi|304423800|gb|EFM26946.1| alanine racemase [Streptococcus bovis ATCC 700338] Length = 368 Score = 40.5 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 7/99 (7%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFAAWG----MFDTLNQYMDGTTSSSLYE 62 +ID + N+D K A+ K A + ++ +DG S++ E Sbjct: 12 VIDLDVICQNIDAVK--ANIPQDKKAFAVVKANAYGHGATNVAHAIHHLVDGFCVSNIDE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTV 101 + E ET E+ T+ + Sbjct: 70 ALELREAGIEETILILGVIMPDEVALARDYHVTLTVASQ 108 >gi|37525915|ref|NP_929259.1| hypothetical protein plu1996 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785344|emb|CAE14289.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 392 Score = 40.5 bits (93), Expect = 0.44, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 50/163 (30%), Gaps = 5/163 (3%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYM-DGTTSSSLYEVM 64 Y+ID ++L N L + ++ G+ L L K + L + G T+ E Sbjct: 31 YVIDVDQVLENARRLLAVAEHYGIALYLMTKQVGRNSWLARKLMELGYQGVTAVDFKEAR 90 Query: 65 LGHEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 THA ++ + + + + + I ++ + + A++ + + Sbjct: 91 ALMSGKIPVTHAGHLVQIPRNMVSSVMQQHPEVITVYSLEKAEEISSLARREGNVQRIML 150 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-KNVNGLMFH 164 + I + + GL Sbjct: 151 KIYDDHDHLYPGQEAGFHLSELHTIVQHIMAMPGVKLTGLTHF 193 >gi|217979517|ref|YP_002363664.1| alanine racemase domain protein [Methylocella silvestris BL2] gi|217504893|gb|ACK52302.1| alanine racemase domain protein [Methylocella silvestris BL2] Length = 383 Score = 40.5 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP ++D N+ I GV L K + + + G +++ Sbjct: 26 LNTPSLILDLDVFDANVARMQAICDANGVNLRPHAKSHKSSRIAQAQREAGAIGVCCATI 85 Query: 61 YEVML-GHEKFGGETHA 76 E GG Sbjct: 86 NEAEAMAVAGVGGLLIT 102 >gi|163790693|ref|ZP_02185120.1| predicted amino acid racemase [Carnobacterium sp. AT7] gi|159873994|gb|EDP68071.1| predicted amino acid racemase [Carnobacterium sp. AT7] Length = 385 Score = 40.5 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 16/47 (34%), Gaps = 1/47 (2%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYM 52 Y++D + N + K ++L LK + L + Sbjct: 31 YVLDLDIIRENAKKLIETAKKNDIELFFMLKQIGRNPAIAKMLVELG 77 >gi|330873739|gb|EGH07888.1| arginine decarboxylase [Pseudomonas syringae pv. glycinea str. race 4] Length = 194 Score = 40.5 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 14/113 (12%), Positives = 27/113 (23%), Gaps = 11/113 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEK 182 >gi|289675722|ref|ZP_06496612.1| arginine decarboxylase [Pseudomonas syringae pv. syringae FF5] Length = 231 Score = 40.5 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 14/113 (12%), Positives = 27/113 (23%), Gaps = 11/113 (9%) Query: 5 PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53 P + L + + + L +K + + + Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 54 GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK 106 G + S E+M YKD E + + N + K Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEK 182 >gi|153011211|ref|YP_001372425.1| alanine racemase domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151563099|gb|ABS16596.1| alanine racemase domain protein [Ochrobactrum anthropi ATCC 49188] Length = 354 Score = 40.5 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 49/201 (24%), Gaps = 5/201 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP LID ++ N+ A GVKL +K + G T L Sbjct: 10 VDTPAILIDIDRVKANIAKAQAHADAVGVKLRPHIKTHKLPLFAKMQVEAGATGITCQKL 69 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + YN+ ++ + + TV A + + Sbjct: 70 GEAEVMADAGLTNIFLPYNILGQEKLDRLHTLHQRITLSVTVDNRTSLAGLAARFTDEKH 129 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 + P L I + + L Sbjct: 130 PLKVLVECDTGMGRCGVQTPAEALELAR---IIDQSAGLRFGGLMTYPAAGKPDEAEQWL 186 Query: 180 KNIEKEFGHFITQIEWISLGG 200 + + E IS GG Sbjct: 187 YSARELLEANSLPCETISSGG 207 >gi|170745253|ref|YP_001766710.1| alanine racemase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170658854|gb|ACB27908.1| alanine racemase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 393 Score = 40.5 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 1/76 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60 ++TP L+D+ +L NL GV L LK + + G S+L Sbjct: 22 LQTPCLLLDEARLRANLAGMRAHLDRLGVTLRPHLKTAKSIDVARLAMAGPAGPAMVSTL 81 Query: 61 YEVMLGHEKFGGETHA 76 E E + Sbjct: 82 REAEYFAEGGVRDMIY 97 >gi|91778101|ref|YP_553309.1| metal-activated pyridoxal protein [Burkholderia xenovorans LB400] gi|91690761|gb|ABE33959.1| Metal-activated pyridoxal enzyme [Burkholderia xenovorans LB400] Length = 379 Score = 40.5 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 44/172 (25%), Gaps = 11/172 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 I+TP LID ++ N+ GV +K + + G T S+L Sbjct: 6 IETPAALIDIARMQKNIARMQGHMNTLGVAFRPHVKTTKCIDVVRAQIAAGARGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G E Y V+ + ++ + + A Sbjct: 66 KEAE-AFFAAGVEDILYAVSMAPSKLPRALALRRQGCDLKLVVDNPNAAA--AIAAFSDQ 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + V + L + V G+M H Sbjct: 123 HGQTFEVCIEVDTDGHRSGITPEQDTLLEVG--RILHENGVKVGGVMTHAGS 172 >gi|288563211|pdb|3LLX|A Chain A, Crystal Structure Of An Ala Racemase-Like Protein (Il1761) From Idiomarina Loihiensis At 1.50 A Resolution Length = 376 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 21/212 (9%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-------DGT 55 TPY LID+ KL +N++ ++ G L TL Sbjct: 13 DTPYLLIDEAKLKSNINYLKQRVESLGSHLR------PHLXTLRTLEAAGYLLDSKSAPA 66 Query: 56 TSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQLNKFKDK 110 T S+L E + K G Y V ++ V I+ + ++Q D Sbjct: 67 TVSTLAEAE-AYAKAGYTDLLYAVGIAPAKLKRVAALRQQGINLHILLDNITQAQAVVDY 125 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-FHNNCEN 169 A + + + I + + + + + + + G + Sbjct: 126 AAEFGQDFSVFIEIDSDDHRGGIKPSDSKLLTIAKTLGEHFTGLXTHAGGSYACNTEQGL 185 Query: 170 KSFLCFSAM-LKNIEKEFGHFITQIEWISLGG 200 K+F ++ S+G Sbjct: 186 KNFAKQECDAVRIARNNLETAGIHCAITSVGS 217 >gi|163854345|ref|YP_001628643.1| putative amino acid aldolase or racemase [Bordetella petrii DSM 12804] gi|163258073|emb|CAP40372.1| putative amino acid aldolase or racemase [Bordetella petrii] Length = 379 Score = 40.1 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 19/78 (24%), Gaps = 2/78 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP ++D +NL GV L K + G + Sbjct: 25 VDTPSLVLDLDAFESNLRQMQAWADRHGVALRPHAKAHKCPEIARRQLALGARGICCQKV 84 Query: 61 YEVM-LGHEKFGGETHAY 77 E + + Sbjct: 85 SEALPFVAAGIDDVHISN 102 >gi|149909881|ref|ZP_01898531.1| metal-activated pyridoxal enzyme [Moritella sp. PE36] gi|149807046|gb|EDM67004.1| metal-activated pyridoxal enzyme [Moritella sp. PE36] Length = 363 Score = 40.1 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTS--- 57 + TP +IDK+KL++N++T + K + L+ G + Sbjct: 9 LDTPCLVIDKRKLMHNIETMQKFAAAKSKHVRPHAKTHKCVEICQLQLDAGSIGISITKP 68 Query: 58 SSLYEVMLGH 67 S YE+ H Sbjct: 69 SEAYELAKAH 78 >gi|330829095|ref|YP_004392047.1| alanine racemase [Aeromonas veronii B565] gi|328804231|gb|AEB49430.1| Alanine racemase [Aeromonas veronii B565] Length = 408 Score = 40.1 bits (92), Expect = 0.51, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 88/333 (26%), Gaps = 28/333 (8%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL-----NQYMDGTTSSSLYEV 63 +D +N+ T + G ++ +K A D L + +S E Sbjct: 46 VDLGAFEHNIQTLKDRLGDKGPQICAIMKADAYGHGIDLLVPSVVKANIPCIGIASNEEA 105 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + E F G A D A+ + +I ++ D AQ+ H I + I Sbjct: 106 RVAREKGFTGRLMRVRAATPDEVEQALPYKMEELI-GSLVSAQGIADIAQRHHTTIPVHI 164 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-KNVNGLMFHNNCENKSFLCFSA---- 177 N RL + +D + K + + + + Sbjct: 165 -----ALNSAGMSRNGIDLRLADAKQDALAMLKLKGITPVGIMTHFPVEEKEDVKMGLAQ 219 Query: 178 -----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK----EFSEKYSVQ 228 + I + + D + + L +Y Sbjct: 220 FKLDSQWLLEAGKLDRSKITIHAANSFATLAVPDAYFDMVRPGGLLYGDSIPSHTEYKRV 279 Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288 + + A V N TV +++ D S Y Sbjct: 280 MAFKTQVASV-NHYAAGNTVGYDRTFTLKRDSWLANLPLGYSDGYRRSLSNKAYVLIQGQ 338 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321 V G++ + I + K VK GD + Sbjct: 339 KVPVVGKTSMNT-IMVDVTDLKGVKPGDEVVLF 370 >gi|307727882|ref|YP_003911095.1| alanine racemase domain-containing protein [Burkholderia sp. CCGE1003] gi|307588407|gb|ADN61804.1| alanine racemase domain protein [Burkholderia sp. CCGE1003] Length = 376 Score = 40.1 bits (92), Expect = 0.52, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 36/137 (26%), Gaps = 9/137 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ N++ GV +K + L G T S+L Sbjct: 6 LNTPAALIDVARMNRNIERMQQRMNTLGVSFRPHVKTTKCEQVVRAQLAAGARGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V + I+ ++V+ A Sbjct: 66 KEAEQFFAA-GIRDIVYAVGMAPTKLPQALALRRQGCDLKIVADSVACAEAI--VAFGRR 122 Query: 116 KKIGLRINPSVSYSKFI 132 + + Sbjct: 123 YDEAFEVWIEIDVDGHR 139 >gi|124265522|ref|YP_001019526.1| low-specificity D-threonine aldolase [Methylibium petroleiphilum PM1] gi|124258297|gb|ABM93291.1| low-specificity D-threonine aldolase [Methylibium petroleiphilum PM1] Length = 372 Score = 40.1 bits (92), Expect = 0.53, Method: Composition-based stats. Identities = 16/166 (9%), Positives = 43/166 (25%), Gaps = 7/166 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 I +P +++ NL ++ GV+L K + + + G + Sbjct: 15 IDSPALVVEIDAFERNLAAMDAFARSHGVRLRPHAKTHKCSAIALHQVARGAVGVCVQKV 74 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSN----CDTIIFNTVSQLNKFKDKAQKLHK 116 E + + N ++ + + I ++V + + A Sbjct: 75 GEALALAAGGVRDVFVSNEVIAPTKLARLAALPSDVQLAIAVDSVVGIERL--AAAIQAS 132 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM 162 + + + + P L + + Sbjct: 133 GRQIDVYVEIDAGQGRCGVPAAEAGALARQVVAHDGLRFAGLQAYH 178 >gi|170745477|ref|YP_001766934.1| alanine racemase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170659078|gb|ACB28132.1| alanine racemase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 392 Score = 40.1 bits (92), Expect = 0.53, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 36/135 (26%), Gaps = 9/135 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57 I+TP ++D L N+ + G++ K + + G Sbjct: 32 IQTPCLILDLDALEGNIRKMGDYARAHGMRHRAHGKMHKSVDILKLQQSLGGACGVCCQK 91 Query: 58 SSLYEVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIF-NTVSQLNKFKDKAQK 113 S EV + D I+ + V+ + + AQ+ Sbjct: 92 VSEAEV-FARAGITDILVSNQVRDPGKIDRLARLPRHGARIIVCLDDVANVAELSAAAQR 150 Query: 114 LHKKIGLRINPSVSY 128 ++ + Sbjct: 151 HGTQLDCFVEIDCGA 165 >gi|295699224|ref|YP_003607117.1| alanine racemase domain protein [Burkholderia sp. CCGE1002] gi|295438437|gb|ADG17606.1| alanine racemase domain protein [Burkholderia sp. CCGE1002] Length = 382 Score = 40.1 bits (92), Expect = 0.55, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 45/172 (26%), Gaps = 11/172 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 I+TP LID ++ N+ GV +K + + G T S+L Sbjct: 6 IETPAALIDVARMQKNIARMQGRMNELGVAFRPHVKTTKCIDVVRAQIAAGARGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G + Y V+ + ++ + + A Sbjct: 66 KEAE-AFFAAGVDDILYAVSMVPSKLPRALALRRQGCDLKLVVDNPTAAA--ALAAFGDQ 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + V +P + + V G+M H Sbjct: 123 HGETFEVWIEVDTDGHR--SGIQPEQQTLLDVGRILHENGVKVGGVMTHAGS 172 >gi|254441228|ref|ZP_05054721.1| hypothetical protein OA307_643 [Octadecabacter antarcticus 307] gi|198251306|gb|EDY75621.1| hypothetical protein OA307_643 [Octadecabacter antarcticus 307] Length = 69 Score = 40.1 bits (92), Expect = 0.55, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 4/61 (6%) Query: 289 TAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAV 344 + C + D+ E +K GD I + + + + FNG + V Sbjct: 9 PCVFAAPPCDSADVLYEKQPMLLPVTLKAGDGIVNRNCDAHTSSYSSVGFNGFPPLDVLV 68 Query: 345 K 345 Sbjct: 69 I 69 >gi|300782672|ref|YP_003762963.1| alanine racemase [Amycolatopsis mediterranei U32] gi|299792186|gb|ADJ42561.1| alanine racemase [Amycolatopsis mediterranei U32] Length = 371 Score = 40.1 bits (92), Expect = 0.55, Method: Composition-based stats. Identities = 34/335 (10%), Positives = 95/335 (28%), Gaps = 27/335 (8%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMD-GTTSSSLYEV 63 ID + +NL + G +++ +K A A + + + SL E Sbjct: 12 IDLDAIRHNLTLL--GARAPGSEVMAVVKADAYGHGALPVARAAVEAGATWLGTCSLGEA 69 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKIGLRI 122 + E + D + + N + +++ +L + A+ ++ L+I Sbjct: 70 LALREAGITARLFSWLDTPDVDFAPGVENDIDLAASSLGELRRISAAAKPGTPARVHLKI 129 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + +S + A + + ++ + ++ + + Sbjct: 130 DTGLSRNGCPPAAWAELVEAAAAEPRVEVVAIWSHLACADEPEHPSIDL--QAKRFAEAY 187 Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE---AIVT 239 + + + ++ + ++ Y + +P + A+ Sbjct: 188 DTARAAGLDPMRHLANSAALLTR-----PDLHFDIVRPGIAMYGLNPVPQPEDLRPAMTF 242 Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA-------MV 292 + ++ E++ +S E ++ +G V Sbjct: 243 RSAVALVKRIEAGESVSYGHTWTASRETNLALVPAGYADGVPRSLSGRMDVLLGGQRRPV 302 Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327 GR C D + +GD + + Sbjct: 303 AGRVC--MDQLVVDCGDYEPSVGDEVVLFGAGAHG 335 >gi|297587277|ref|ZP_06945922.1| alanine racemase [Finegoldia magna ATCC 53516] gi|297575258|gb|EFH93977.1| alanine racemase [Finegoldia magna ATCC 53516] Length = 391 Score = 40.1 bits (92), Expect = 0.56, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 95/342 (27%), Gaps = 33/342 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM-DGTTSSSLYEV 63 +D KL +N I VK+ +K A A + L D S++ E Sbjct: 10 VDLDKLKHNYKEIKNISNL--VKMCAVVKANAYGQGAAFITKELEYLGIDYFAVSNINEA 67 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + + I+ + N + + + A+ L+K + I Sbjct: 68 LELRKNGIFKPIMILGYISNENIEVAIKNNIELTVYDYETAVEINNVAKSLNKICKVHIK 127 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L E ++ NV +++ + +S + Sbjct: 128 IDTGMTRLGFQVRLDKDKCLEEI---FKIYKMDNVVLQGIYSHFSDADSEDYSYTKEQYN 184 Query: 184 KEFGHF------ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 G + + Y D + ++ E Sbjct: 185 TYIGFMIDVENRGITVPIKHIANDAGAIIHGY-FLDMIRCGIGLYGYHASDYVRENSRLN 243 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTG---- 286 + ++L TTV I K I + + N Sbjct: 244 LEEISSLYTTVSMIKTVPKGTDIGYGRTFTTNSETVVATATIGYADGYPLELSNKAYVII 303 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE---DVA 324 A + G+ C+ I + + + VK+GD+I D+ Sbjct: 304 NGKKAKILGKVCMDQ-IMIDVTYIRDVKVGDKILLFGKDDMG 344 >gi|156362167|ref|XP_001625652.1| predicted protein [Nematostella vectensis] gi|156212495|gb|EDO33552.1| predicted protein [Nematostella vectensis] Length = 112 Score = 40.1 bits (92), Expect = 0.56, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 1/62 (1%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYE 62 TP L+D + N+ + +N+GV+ K + + G L E Sbjct: 14 TPVLLVDLCRFERNIRKLMKTLENSGVRARPHAKAHKCPAIAHIQISHGANGVCCQKLSE 73 Query: 63 VM 64 Sbjct: 74 AE 75 >gi|170744100|ref|YP_001772755.1| alanine racemase domain-containing protein [Methylobacterium sp. 4-46] gi|168198374|gb|ACA20321.1| alanine racemase domain protein [Methylobacterium sp. 4-46] Length = 359 Score = 40.1 bits (92), Expect = 0.56, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 2/83 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61 +P +ID ++ N+ AG+ +K + + + G T +L Sbjct: 13 GSPAVMIDLDRVERNIARLQAACDAAGLANRPHIKTHKSPVLARMQREAGARGLTCQTLG 72 Query: 62 EVM-LGHEKFGGETHAYNVAYKD 83 E + +YN+ + Sbjct: 73 EAEVMAEAGLDDILISYNLVGPE 95 >gi|103488650|ref|YP_618211.1| threonine aldolase family protein [Sphingopyxis alaskensis RB2256] gi|98978727|gb|ABF54878.1| threonine aldolase family protein [Sphingopyxis alaskensis RB2256] Length = 381 Score = 40.1 bits (92), Expect = 0.56, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 2/77 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP ++D++ L N+ + K AGV L K + + G + + Sbjct: 21 LNTPVLILDREALDRNIARMAALTKAAGVALRPHAKTHKSVDIARRQLDAGAVGVCCAKI 80 Query: 61 YEVM-LGHEKFGGETHA 76 E L G Sbjct: 81 GEAEILADGGITGILIT 97 >gi|320536161|ref|ZP_08036211.1| alanine racemase [Treponema phagedenis F0421] gi|320146997|gb|EFW38563.1| alanine racemase [Treponema phagedenis F0421] Length = 379 Score = 40.1 bits (92), Expect = 0.57, Method: Composition-based stats. Identities = 17/163 (10%), Positives = 48/163 (29%), Gaps = 13/163 (7%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCF-----AAWGMFDTLNQYMDGTTSSSLYE 62 +I L N+ K GVK+ L +K A + + +S+ E Sbjct: 7 IIHLDNLQYNIAEIKKRLK-PGVKICLPVKADAYGHGAFRVAVAAIRAGVSSLAVASIQE 65 Query: 63 -VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + L + + ++ + + N ++ ++ ++A ++ + Sbjct: 66 GIDLRNAGIVAPIISLSLPILEEIHSIIEYNIHPLVIDSEFIHA-LNEEAARMKTVQAVH 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH 164 + + + ++ + G+ H Sbjct: 125 LKID-----TGMNRIGCKPEDAITLAAEIVQLPNLKLEGVCTH 162 >gi|125717409|ref|YP_001034542.1| alanine racemase [Streptococcus sanguinis SK36] gi|125497326|gb|ABN43992.1| Alanine racemase, putative [Streptococcus sanguinis SK36] Length = 369 Score = 40.1 bits (92), Expect = 0.57, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 47/180 (26%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + ++ +DG S++ E Sbjct: 13 VIDLAAIAFNIRQLSAHLPQKTEK--WAVVKANAYGHGAIEVSKHIDPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L GL Sbjct: 71 ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEVDHYKFEAQLARFH 186 >gi|229591485|ref|YP_002873604.1| putative metal-activated pyridoxal enzyme [Pseudomonas fluorescens SBW25] gi|229363351|emb|CAY50481.1| putative metal-activated pyridoxal enzyme [Pseudomonas fluorescens SBW25] Length = 378 Score = 40.1 bits (92), Expect = 0.57, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 9/171 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ +N+ GV+L +K + L G T S+L Sbjct: 8 LDTPAALIDIPRMQHNIQRMQQRMNTLGVRLRPHIKTSKCLPVIQAQLAAGASGVTVSTL 67 Query: 61 YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + + A + C+ ++ ++V+ A Sbjct: 68 KEAQHCFSQGILDVFYAVAVAPGKLPQALALRRQGCNLSLLTDSVAGAQAL--VAFAQQH 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 L + + + ++ G+M H Sbjct: 126 DERLDVWIEIDCDGHR--SGLAAEDEALLDVARILSDGGMHLRGVMTHAGS 174 >gi|325688113|gb|EGD30132.1| alanine racemase [Streptococcus sanguinis SK72] Length = 369 Score = 40.1 bits (92), Expect = 0.58, Method: Composition-based stats. Identities = 19/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIAFNIRQLSAHLPQMTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L GL Sbjct: 71 ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + +R + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAREAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLTRFH 186 >gi|218897074|ref|YP_002445485.1| alanine racemase [Bacillus cereus G9842] gi|218544621|gb|ACK97015.1| alanine racemase [Bacillus cereus G9842] Length = 391 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 34/335 (10%), Positives = 88/335 (26%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 ID + +N++ + +K++ A+K A + + Sbjct: 13 IDLNAVKHNVNEFKKHVNDEKIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 72 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y ++ + + A +L KK+ + Sbjct: 73 IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 ++ S+ L + ++ E V G+ + E + Sbjct: 130 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 184 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + QI +I + ++ + + K + Sbjct: 185 SLFEKAVNTARELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHTIVS 244 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 304 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 305 NGIRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338 >gi|295680721|ref|YP_003609295.1| alanine racemase domain protein [Burkholderia sp. CCGE1002] gi|295440616|gb|ADG19784.1| alanine racemase domain protein [Burkholderia sp. CCGE1002] Length = 376 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 49/172 (28%), Gaps = 11/172 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ +N+D G + +K + D + G T S+L Sbjct: 6 LNTPAALIDVARMRHNIDNMQARLDKLGARFRPHVKTTKCKQVVDAQVAAGACGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V ++ I+ +++ D Sbjct: 66 KEAEQFFAS-GVRDIVYAVGMVPTKLPQALALRQRGCDLKIVVDSLQVARAVAD--FGRE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + +P L + + + + G++ H Sbjct: 123 HDERFEVWVEIDVDGHR--SGIQPDDDLLVEVGRALVAGGMTLGGVLAHAGS 172 >gi|227820182|ref|YP_002824153.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234] gi|227339181|gb|ACP23400.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234] Length = 387 Score = 40.1 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 21/199 (10%), Positives = 48/199 (24%), Gaps = 19/199 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59 I+TP ++D L N+ K ++ K + + + G Sbjct: 27 IQTPCLILDLDALERNIRKMGDYAKAHNMRHRAHGKMHKSVDVLRLQQELGGAIGVCCQK 86 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 + E + + N + A + + ++ + + QK Sbjct: 87 VSEAEVFVRGGIKDVLVSNQVRDPLKIDRLARLAKQDARIIVCVDDLANVAELSAATQKH 146 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + + R G + + VNG +++ Sbjct: 147 GATLECFVEIDCGA------------GRCGVTSISAVVALADAVNGAPGLTFAGIQAYQG 194 Query: 175 FSAMLKNIEKEFGHFITQI 193 + E I Sbjct: 195 AMQHIDKYEDRKAKLDIAI 213 >gi|327461776|gb|EGF08107.1| alanine racemase [Streptococcus sanguinis SK1] Length = 369 Score = 39.7 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L GL Sbjct: 71 ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALDAEEDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186 >gi|254472752|ref|ZP_05086151.1| alanine racemase domain protein [Pseudovibrio sp. JE062] gi|211958216|gb|EEA93417.1| alanine racemase domain protein [Pseudovibrio sp. JE062] Length = 383 Score = 39.7 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 21/184 (11%), Positives = 51/184 (27%), Gaps = 15/184 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57 ++TP ++D +NL GV+ K + + + G Sbjct: 25 VQTPALIVDLDAFDHNLFKMRDEIARYGVRHRAHCKMHKSAEIAKLQMEQGHACGVCCQK 84 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQ 112 S E L + N +ID + + + + + + A Sbjct: 85 VSEAEA-LARAGIT-DIMVSNEVCDPYKIDRLAQLPKLGARILVCTDNLPNIAALSEAAV 142 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 K ++ + + S + + E + I + + G+ + ++ Sbjct: 143 KHGTELEVLVELDCGGS----RCGVADSAAVLELATEIINAPNLHFAGIQSYQGAAQHAY 198 Query: 173 LCFS 176 Sbjct: 199 EYAD 202 >gi|332363899|gb|EGJ41678.1| alanine racemase [Streptococcus sanguinis SK355] Length = 369 Score = 39.7 bits (91), Expect = 0.66, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSKHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L GL Sbjct: 71 ALELRSAGIGKRILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALAAEKDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186 >gi|83747285|ref|ZP_00944327.1| Alanine racemase [Ralstonia solanacearum UW551] gi|207744276|ref|YP_002260668.1| ipr001608 alanine racemase, n-terminal protein [Ralstonia solanacearum IPO1609] gi|83726109|gb|EAP73245.1| Alanine racemase [Ralstonia solanacearum UW551] gi|206595681|emb|CAQ62608.1| ipr001608 alanine racemase, n-terminal protein [Ralstonia solanacearum IPO1609] Length = 376 Score = 39.7 bits (91), Expect = 0.66, Method: Composition-based stats. Identities = 37/323 (11%), Positives = 75/323 (23%), Gaps = 31/323 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ N+ GV+ +K + L G T S+L Sbjct: 6 LNTPAALIDVARMTGNIARMQQRLDALGVRFRPHVKTTKCEPVVRAQLAAGAQGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V I+ ++V+ A Sbjct: 66 KEAEQFFAA-GIRDIVYAVGMAPTRLPQALALRRRGCDLKIVADSVACAQAI--AAFGSA 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC- 174 + V P + + G++ H + Sbjct: 123 HGEAFEVWIEVDVDGHRSGIV--PDDDRLIAVGRVLAEGGMRLGGVLAHAGSSYEYHAHD 180 Query: 175 --------FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 + + E +S+G + + + Sbjct: 181 ALVRIAELERSGCVRAAERLRAAGLPCETVSIG-STPTALSAEHLDGVTEVRAGVYVMFD 239 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 + ++ A+ ++ TTV+ E+ + D S Sbjct: 240 LVMHNVGVCALSDIALSVLTTVIGHQEDKGWA----------IVDAGWMAMSRDRGTQKQ 289 Query: 287 PYTAMVCGRSCLAGDIFGEFHFE 309 P G++ ++ Sbjct: 290 PRDFGYGLVCSEQGEVLADYLMM 312 >gi|187931379|ref|YP_001891363.1| putative arginine decarboxylase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712288|gb|ACD30585.1| putative arginine decarboxylase [Francisella tularensis subsp. mediasiatica FSC147] Length = 469 Score = 39.7 bits (91), Expect = 0.66, Method: Composition-based stats. Identities = 27/235 (11%), Positives = 54/235 (22%), Gaps = 25/235 (10%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG-- 54 P L + L N LD A L +K + + Y Sbjct: 52 PLVLYFEHILKNQLDKLYTSFGKAIDDFSYTGKYSLAYPIKVNPEQKIIKAIYDYHQHNQ 111 Query: 55 ----TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 + E + +KD + I + + + + Sbjct: 112 VSLDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEI 171 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLM 162 + D + G + + L Sbjct: 172 NIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQKFGLSLSQINKCINFLKTNQLQQKLLLLH 231 Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214 H + KS A ++ + + + +E+I GGG+ +Y + Sbjct: 232 SHIGSQLKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGGLAVNYDEYDRPSY 286 >gi|325696971|gb|EGD38858.1| alanine racemase [Streptococcus sanguinis SK160] Length = 369 Score = 39.7 bits (91), Expect = 0.67, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L GL Sbjct: 71 ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEKDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186 >gi|116748009|ref|YP_844696.1| alanine racemase [Syntrophobacter fumaroxidans MPOB] gi|189027394|sp|A0LFQ9|ALR_SYNFM RecName: Full=Alanine racemase gi|116697073|gb|ABK16261.1| alanine racemase [Syntrophobacter fumaroxidans MPOB] Length = 375 Score = 39.7 bits (91), Expect = 0.67, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 47/164 (28%), Gaps = 11/164 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSL-YEV 63 ID L +N A G ++L +K A + L + S +E Sbjct: 8 IDLAALRHNYSRAKERLA-PGSRILGVVKSDAYGHGMIPVARELVACGASFLAVSKHWEA 66 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + E+ + N + + + D A+ L+ + + Sbjct: 67 VDLRAAGIRLPILCLLGVEPSEMAEAIRNEIRPVIYRIDHARRLSDTARSLNATATVHVK 126 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + + L + + + G++ H Sbjct: 127 LDTGMGRLGIPCRH-----LEAFLNELLTLPAIRLEGVLSHFAS 165 >gi|330837455|ref|YP_004412096.1| alanine racemase domain-containing protein [Spirochaeta coccoides DSM 17374] gi|329749358|gb|AEC02714.1| alanine racemase domain protein [Spirochaeta coccoides DSM 17374] Length = 387 Score = 39.7 bits (91), Expect = 0.67, Method: Composition-based stats. Identities = 23/275 (8%), Positives = 58/275 (21%), Gaps = 11/275 (4%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYM-DGTTSSSLYEVM 64 Y+ID +L N + V L LK + L G + E + Sbjct: 31 YVIDMDRLALNAENLKKTADAESVSLYFMLKQVGHNPVIARLLTDMGYAGAVAVDYREAL 90 Query: 65 -LGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G K + + + + ++ + + + LH + + + Sbjct: 91 EYVDQGIPLGNVGHLVQTPKATLPKILSARPEIMTIYSLEKAQEIEHICSHLHMEQQVML 150 Query: 123 N-PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN------CENKSFLCF 175 + L E + ++ G+ Sbjct: 151 RVMDNGDICLPGQTGGFSLASLPEVVSSLRKLPHVHIAGVTAFPCFLYDEKRGTIFPTHN 210 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 S+ + + ++L + + Sbjct: 211 SSTVVKAAAWLRDRGIPVSQVNLPSATCSDTIPLIHQIGGTHGEPGHGLTGTTPLHAEKN 270 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP 270 + V + +H+ Sbjct: 271 CAEIPGIVYVSEVSHTEGGMSFCYGGGHYRRSHMR 305 >gi|295110109|emb|CBL24062.1| alanine racemase [Ruminococcus obeum A2-162] Length = 388 Score = 39.7 bits (91), Expect = 0.67, Method: Composition-based stats. Identities = 37/382 (9%), Positives = 88/382 (23%), Gaps = 54/382 (14%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKC----FAAWGMFDTLN--QYMDGTTSSSLY 61 ++ + +N + G K++ +K A + + +Y+ G +++ Sbjct: 10 VVSLDAIAHNFEEMKKNIAE-GTKIVAVIKADGYGHGAEAIARLIEDYEYIWGYATATPE 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E + + + + ++++ + ++A + +++ + Sbjct: 69 EALQLRDAGIDKPILILGIVFEEYYKELIAHEVRMTVCEYEMAAALSEEAVRQGRQVHIH 128 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFSA 177 I + E K + G+ F E + Sbjct: 129 IGLD----TGMSRIGFADVPESVETIKKIAALPNVEIEGMFTHFARADETDRSPAITQLN 184 Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE--PGE 235 + +I + + Y Sbjct: 185 RYLAFTELLEKAGVEIPMKHCSNSAGIIRVPEANLNAVRAGITIYGIYPSNEVERDIVKL 244 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----DYLLYQESATIYPNTGP---- 287 + + V D+ + E + N G Sbjct: 245 IPAMELKSHVSYVKDLPAGTPISYGGTFASEKDLRVATIPVGYADGYPRSLSNKGWVLIH 304 Query: 288 -YTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 A + GR C D F + VK GD + + Sbjct: 305 GQKAPIIGRVC--MDQFMVDVTDIPEVKHGD------------------------EVTLI 338 Query: 346 NVDGTIKAIREFSYNDYYNNLS 367 DG + I ++ D S Sbjct: 339 GKDGE-EFISIETFGDLSGRFS 359 >gi|206562454|ref|YP_002233217.1| putative alanine racemase [Burkholderia cenocepacia J2315] gi|198038494|emb|CAR54452.1| putative alanine racemase [Burkholderia cenocepacia J2315] Length = 376 Score = 39.7 bits (91), Expect = 0.68, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 45/178 (25%), Gaps = 9/178 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ N+ GV+ +K + D + G T S+L Sbjct: 6 LNTPAALIDVGRMQRNIARMQTHLDALGVRFRPHVKTTKCRHVVDAQIAAGAQGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V ++ I+ +++ A Sbjct: 66 KEAEQFFAH-GIRDIVYAVGMVPAKLGQALALRRQGCDLKIVADSLPAAQAI--AAFGRE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173 + V P + + ++ E+ + Sbjct: 123 HGERFDVWIEVDVDGHRSGIPPEADLLIDVGRALTGGGTLLGGVLAHAGSSYEHDTPD 180 >gi|308178610|ref|YP_003918016.1| alanine racemase-like protein [Arthrobacter arilaitensis Re117] gi|307746073|emb|CBT77045.1| alanine racemase-like protein [Arthrobacter arilaitensis Re117] Length = 366 Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 18/211 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60 I TP L+D KL N+D + + G+KL K + +N G T +++ Sbjct: 8 ISTPQILVDVAKLEKNIDRVAHRVASQGLKLRPHAKTHKMQEIAERQMNAGAAGLTVATV 67 Query: 61 YEVM-LGHEKFGGETHAYN----VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + AY A ++ + +I ++V + + + Sbjct: 68 GEALSFALHGVAKIFIAYPLWVDQAQATRILELMRRAKLSIGTDSVEAVEQMAKMLGEKV 127 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG-LMFHNNCENKS--- 171 K+ L I + + + + + + V+G F + Sbjct: 128 SKVKLIIEIDSGH------HRSGVSPQGAVEIAEAARAVGMRVHGVFTFPGHSYAPEGID 181 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGG 200 L I+ IS G Sbjct: 182 AALNDEHKALAEAACLLRDAGHTIKRISGGS 212 >gi|160941188|ref|ZP_02088525.1| hypothetical protein CLOBOL_06081 [Clostridium bolteae ATCC BAA-613] gi|158435749|gb|EDP13516.1| hypothetical protein CLOBOL_06081 [Clostridium bolteae ATCC BAA-613] Length = 392 Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats. Identities = 26/254 (10%), Positives = 56/254 (22%), Gaps = 20/254 (7%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG-MFDTLNQY-MDGTT---SSSLYEV 63 I + +N VK++ A+K A + + G S+ E Sbjct: 14 ISLDNVRDNFFAFKK-MVGPDVKVMPAVKANAYGHGIVPCGKELEACGADYLGMGSISEA 72 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + E + + + + + + D A + Sbjct: 73 IKLRENGVKMPLLVFASNTIEEVAELYIQYHLIPTILSEREAKAISDAASSPVP-----V 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + L F K ++ V M N + S + Sbjct: 128 FVKIDTGRGRLGVNAEEFPDFYRKITALPNLYVEGVYSHMAAVNWPDVSAEYGLWQYERF 187 Query: 183 E---KEFGHFITQIEWISL-----GGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 + G +I + L G + ++ L+ Sbjct: 188 SAAIEVLGEEGKKIPFCQLANTPGGIALPEIRMTGVCPGRAIWGYSPLDRREGHPQLKHP 247 Query: 235 EAIVTNTTTLNTTV 248 + V Sbjct: 248 ITAWKSRLIHINQV 261 >gi|75763091|ref|ZP_00742872.1| Alanine racemase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228900692|ref|ZP_04064911.1| Alanine racemase [Bacillus thuringiensis IBL 4222] gi|74489425|gb|EAO52860.1| Alanine racemase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228858950|gb|EEN03391.1| Alanine racemase [Bacillus thuringiensis IBL 4222] Length = 408 Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats. Identities = 34/335 (10%), Positives = 88/335 (26%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 ID + +N++ + +K++ A+K A + + Sbjct: 30 IDLNAVKHNVNEFKKHVNDEKIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y ++ + + A +L KK+ + Sbjct: 90 IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 ++ S+ L + ++ E V G+ + E + Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 201 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + QI +I + ++ + + K + Sbjct: 202 SLFEKAVNTARELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHTIVS 261 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 322 NGIRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355 >gi|326533006|dbj|BAJ89348.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 548 Score = 39.7 bits (91), Expect = 0.71, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 60/216 (27%), Gaps = 22/216 (10%) Query: 44 MFDTLNQYMDGTTSSSLYEVMLGH----EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN 99 + + + G + S E++L + + YKD E ++ T+ N Sbjct: 3 IVEFGAPFGFGLEAGSKPELLLTMSCLVARGSPDALLICNGYKDLEYVSLALIARTMGLN 62 Query: 100 TVSQLNK-----FKDKAQKLHKKIGLRINPSVSYSKFILAD--PNRPFSRLGEKCKDKIE 152 TV L + +A + + + +K + + G + Sbjct: 63 TVIVLEQEEELDIVVEASRRLNIRPVVGMRAKLRTKHAGHFGATSGEKGKFGLNAAQILS 122 Query: 153 S--------EIKNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGG 201 + + L FH + + I E + I +GGG Sbjct: 123 VVAKLKALGMLDCLQLLHFHIGSQIPTTALLADGVGEAAQIYCELARLGAAMRVIDVGGG 182 Query: 202 IHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 + + + E+Y+ + G Sbjct: 183 LGIDYDGTHSAETDMSVAYSLEEYAAAVVAAVGRVC 218 >gi|302379690|ref|ZP_07268175.1| alanine racemase [Finegoldia magna ACS-171-V-Col3] gi|302312597|gb|EFK94593.1| alanine racemase [Finegoldia magna ACS-171-V-Col3] Length = 391 Score = 39.7 bits (91), Expect = 0.72, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 95/342 (27%), Gaps = 33/342 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM-DGTTSSSLYEV 63 +D KL +N I VK+ +K A A + L D S++ E Sbjct: 10 VDLDKLKHNYKEIKNISNL--VKMCAVVKANAYGQGAAFITKELEYLGIDYFAVSNINEA 67 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + + I+ + N + + + A+ L+K + I Sbjct: 68 LELRKNGIFKPIMILGYISNENIEVAIKNNIELTVYDYDTAVEINNVAKSLNKICKVHIK 127 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L E ++ NV +++ + +S + Sbjct: 128 IDTGMTRLGFQVRLDHDKCLEEI---FKIYKMDNVVLQGIYSHFSDADSEDYSYTKEQYN 184 Query: 184 KEFGHF------ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 G + + Y D + ++ E Sbjct: 185 TYIGFMIDVENRGITVPIKHIANDAGAIIHGY-FLDMIRCGIGLYGYHASDYVTENSRLN 243 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTG---- 286 + ++L TTV I K I + + N Sbjct: 244 LEEISSLYTTVSMIKTVPKGTDIGYGRTFTTNSETIVATATIGYADGYPLELSNKAYVII 303 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE---DVA 324 A + G+ C+ I + + + VK+GD++ D+ Sbjct: 304 NGKKAKILGKVCMDQ-IMIDVTYIRDVKVGDKVLLFGKDDMG 344 >gi|67541953|ref|XP_664744.1| hypothetical protein AN7140.2 [Aspergillus nidulans FGSC A4] gi|40742202|gb|EAA61392.1| hypothetical protein AN7140.2 [Aspergillus nidulans FGSC A4] gi|259483529|tpe|CBF78993.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 414 Score = 39.7 bits (91), Expect = 0.73, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 46/173 (26%), Gaps = 11/173 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG----TTS 57 + TP ++ K + N+ L + G+ +K + + + +G + Sbjct: 15 LPTPALVLSKPTIERNIKQLLQDVERLGIAFRPHVKTLKSLEVTRMM--LGNGQHRRIVA 72 Query: 58 SSLYEVM----LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 S+L E+ L E E Y + + I + + Sbjct: 73 STLPEIEGAIPLAKEGVLDECLYSMPIYPTVLPRLLKFSKSLKILLMIDNEQHIDVLEKF 132 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166 + + A S L K ES + G H Sbjct: 133 SGSTAPWPVFIKIDV-GTRRAGILNSSSALPNLVKRVEESSAVELYGFYCHAG 184 >gi|327458867|gb|EGF05215.1| alanine racemase [Streptococcus sanguinis SK1057] Length = 369 Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSKHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L GL Sbjct: 71 ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALAAEKDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186 >gi|255953449|ref|XP_002567477.1| Pc21g04310 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589188|emb|CAP95328.1| Pc21g04310 [Penicillium chrysogenum Wisconsin 54-1255] Length = 410 Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 49/176 (27%), Gaps = 13/176 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT----S 57 + TP ++ K L N L K G++ +K + + DG + Sbjct: 19 LPTPALILSKPVLERNTQILLEDVKQLGIEFRPHIKTLKCTEVTRMM--LGDGLHRRIVA 76 Query: 58 SSLYEVM----LGHEKFGGETHA---YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110 S+L E+ L E E + + S ++ ++ Q++ + Sbjct: 77 STLAEIRGSLDLVKEGKIDECLYGLPISASALPFLETLNKSLKIILMVDSEQQIDLLEAY 136 Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166 A K + A L + S V G H Sbjct: 137 AAKSSSPVVPWPVFIKIDVGSQRAGMTTHSPCLPRLIQRIESSSAATVYGFYCHAG 192 >gi|196005009|ref|XP_002112371.1| hypothetical protein TRIADDRAFT_56315 [Trichoplax adhaerens] gi|190584412|gb|EDV24481.1| hypothetical protein TRIADDRAFT_56315 [Trichoplax adhaerens] Length = 370 Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats. Identities = 24/211 (11%), Positives = 51/211 (24%), Gaps = 18/211 (8%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYE 62 TP ++D QKL NL K + + K + ++ G L E Sbjct: 17 TPALVVDLQKLDYNLKRLPESLKGININIRPHAKAHKCPSLAHFQIKHGSVGMCCQKLCE 76 Query: 63 VMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 + N + + T+ + ++ A+ L+ ++ Sbjct: 77 AESMVTGGIKDILLSNELVGKSKLTRLALLARNAHITVCIDNEDVASQLSHIAKDLNVEL 136 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS------- 171 + V P + + G+ + Sbjct: 137 DALVEIDVGQE----RCGVPPGEAAVNLARHLTSLPNLHYKGIQAYQGWNQHIRKYNDRK 192 Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGG 200 +K + E ++ GG Sbjct: 193 AAVDMVVTKVKVTLEALRKHNLPCEIVTGGG 223 >gi|126444781|ref|YP_001061081.1| Orn/DAP/Arg decarboxylase family protein [Burkholderia pseudomallei 668] gi|126224272|gb|ABN87777.1| Orn/DAP/Arg decarboxylase family 2 [Burkholderia pseudomallei 668] Length = 38 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 4/38 (10%), Positives = 8/38 (21%), Gaps = 1/38 (2%) Query: 309 EKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVK 345 + GD + Y + F + Sbjct: 1 MATARPGDLLVVFQSGAYGLTASPNGFLSQPAAREVIV 38 >gi|299533035|ref|ZP_07046422.1| alanine racemase-like protein [Comamonas testosteroni S44] gi|298719259|gb|EFI60229.1| alanine racemase-like protein [Comamonas testosteroni S44] Length = 394 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 22/82 (26%), Gaps = 10/82 (12%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV------KLLLALKCFAAWGMFDTLNQYMDGT 55 I TP +ID + N++ + GV KL K + + Sbjct: 19 IDTPALVIDLDAMDRNIERMARFAQQHGVLWRPHAKLH---KSAHIAHLLEHAGACGHCV 75 Query: 56 TSSSLYEVMLGHEKFGGETHAY 77 S E L + Sbjct: 76 QKVSEAEA-LAQGGITNIFISN 96 >gi|264680409|ref|YP_003280319.1| alanine racemase [Comamonas testosteroni CNB-2] gi|262210925|gb|ACY35023.1| alanine racemase-like protein [Comamonas testosteroni CNB-2] Length = 394 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 22/82 (26%), Gaps = 10/82 (12%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV------KLLLALKCFAAWGMFDTLNQYMDGT 55 I TP +ID + N++ + GV KL K + + Sbjct: 19 IDTPALVIDLDAMDRNIERMARFAQQHGVLWRPHAKLH---KSAHIAHLLEHAGACGHCV 75 Query: 56 TSSSLYEVMLGHEKFGGETHAY 77 S E L + Sbjct: 76 QKVSEAEA-LAQGGITNIFISN 96 >gi|221064978|ref|ZP_03541083.1| alanine racemase domain protein [Comamonas testosteroni KF-1] gi|220710001|gb|EED65369.1| alanine racemase domain protein [Comamonas testosteroni KF-1] Length = 394 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 22/82 (26%), Gaps = 10/82 (12%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGV------KLLLALKCFAAWGMFDTLNQYMDGT 55 I TP +ID + N++ + GV KL K + + Sbjct: 19 IDTPALVIDLDAMDRNIERMARFAQQHGVLWRPHAKLH---KSAHIAHLLEHAGACGHCV 75 Query: 56 TSSSLYEVMLGHEKFGGETHAY 77 S E L + Sbjct: 76 QKVSEAEA-LAQGGITNIFISN 96 >gi|329928943|ref|ZP_08282753.1| alanine racemase [Paenibacillus sp. HGF5] gi|328937195|gb|EGG33622.1| alanine racemase [Paenibacillus sp. HGF5] Length = 395 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 40/159 (25%), Gaps = 12/159 (7%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLA-LKCFA----AWGMFDTLNQYM-DGTTSSSLYE 62 I+ L N + LLA +K A A + L Q + + L E Sbjct: 12 INLDHLRANYNAFREAL--PDHMKLLACVKANAYGHGAVEVARELQQLGAAYLSVAFLDE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + ++ TI + L K K K + + I Sbjct: 70 ALELRQGGISVPILVLGYTPPEAVEIAYEYDVTITLFSSEVLQAIKALPVKPEKPLKVHI 129 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL 161 + P ++ V G+ Sbjct: 130 KIDSG----MGRLGLLPGEDAISFIEEAFSLPQVVVEGM 164 >gi|309777378|ref|ZP_07672339.1| alanine racemase [Erysipelotrichaceae bacterium 3_1_53] gi|308914919|gb|EFP60698.1| alanine racemase [Erysipelotrichaceae bacterium 3_1_53] Length = 398 Score = 39.7 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 48/164 (29%) Query: 44 MFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ 103 + T+ D +S YE E + D ++ + T + Sbjct: 61 VARTIEDESDWFAVASFYEAKELREHGITKPILVFGFLDDSHVEEAVQRDITCSALSYEY 120 Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMF 163 ++ ++ + I + + + E+ + E+E ++ G+ Sbjct: 121 AMHLAHLCEQKKLRLSMHIKLDTGFHRLGIDCDENRLQEAYEEVRQLYETEALHITGIYT 180 Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207 H + A LK + F + ++ + GI Sbjct: 181 HFSTAGSKVAQDEAFLKRQYQLFCEILQCLKEDQIDPGIRHCCN 224 >gi|295115115|emb|CBL35962.1| Alanine racemase [butyrate-producing bacterium SM4/1] Length = 155 Score = 39.7 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 33/120 (27%), Gaps = 13/120 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF--------AAWGMFDTLNQYMDGTTSSSL 60 ID + +N G+K++ A+K + + + Y+ ++ Sbjct: 14 IDLDTIRSNFAALRS-MAGPGIKIMPAVKANAYGHGIVESCRALEEAEADYLG---VGNI 69 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E +L E + + D + +V ++ H Sbjct: 70 DEAILLREIGIQTPILIFAGNLVEEVADLYIRYSLIPTIFSVKAAQAISRLSKAEHPVFL 129 >gi|170016499|ref|YP_001727418.1| alanine racemase [Leuconostoc citreum KM20] gi|169803356|gb|ACA81974.1| Alanine racemase [Leuconostoc citreum KM20] Length = 370 Score = 39.7 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 24/204 (11%), Positives = 56/204 (27%), Gaps = 11/204 (5%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA-WGMFDTLNQYMD----GTTSSSLYEV 63 I ++ L NN+ + K+ LA+K A G+ T + G + + E Sbjct: 13 ISQKALKNNVAVVKRVSGAE--KIFLAVKSNAYGLGLIPTAKAAVAGGVYGLAVAIIDEA 70 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + + + L+ ++ AQ L + L ++ Sbjct: 71 LALRHERITAPILILGISPAEYAELMAVQHIMATVVS---LDWLQEAAQYLTGEQRLHVS 127 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 V + +R V ++ F+ L+ Sbjct: 128 LGVDTGMGRIGFRDRQSLSEAIDYVQAHRDIFDYVGLATHFAESDSADTDYFNMQLQRW- 186 Query: 184 KEFGHFITQIEWISLGGGIHFTDK 207 + + + E+ + Sbjct: 187 HKLTDGLPEPEYYHVANSGAAMYH 210 >gi|325182550|emb|CCA17005.1| unnamed protein product [Albugo laibachii Nc14] Length = 412 Score = 39.4 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 22/170 (12%), Positives = 49/170 (28%), Gaps = 10/170 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLL--ALKCFAAWGM--FDTLNQYMDGTTS 57 I+TP L+D + L N+ + G ++ + K + G Sbjct: 38 IETPCLLVDLRALEKNVRFLPESLQRIGAQVHIRPHAKAHKCAAIGRLQIQESQAVGLCC 97 Query: 58 SSLYEVMLGHEKFGGET-----HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 + E + + Y+ A T++F+ + + + + A Sbjct: 98 QKVCEAEAMFKGGIKDLLLSNEIIGIAQYERVAALAAQGAKMTLVFDNMLAIQQAQQVAM 157 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM 162 KL + + +V + + + L KD + Sbjct: 158 KLQVDLHALVEVNVGQDRCGVDTFEQV-LDLALCIKDASNLTFDGLQCYH 206 >gi|324993504|gb|EGC25424.1| alanine racemase [Streptococcus sanguinis SK405] Length = 369 Score = 39.4 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 47/180 (26%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L+ GL Sbjct: 71 ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LDWLDLALTAEEDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186 >gi|259417981|ref|ZP_05741900.1| metal-activated pyridoxal enzyme [Silicibacter sp. TrichCH4B] gi|259346887|gb|EEW58701.1| metal-activated pyridoxal enzyme [Silicibacter sp. TrichCH4B] Length = 387 Score = 39.4 bits (90), Expect = 0.85, Method: Composition-based stats. Identities = 22/180 (12%), Positives = 47/180 (26%), Gaps = 9/180 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57 I+TP ++D L N+ + G++ + K + + G Sbjct: 27 IQTPCLVLDLDALERNIKKMGDYARAHGMRHRVHGKMHKSVDVAKLQESLGGAVGVCCQK 86 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117 S EV + G + + +D L+ + T+ ++ + A Sbjct: 87 VSEAEV---FARGGIKDILVSNQVQDAAKIDRLARLPKLGARTIVCVDDLANVADLSAGA 143 Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 G I V + E + + G+ + Sbjct: 144 QKHGTEIECFVEIDCGAGRCGVTTTEAVVEIAQAIDAAAGLKFTGIQAYQGAMQHIDSYE 203 >gi|148508315|gb|ABQ76098.1| Aspartate decarboxylase [uncultured haloarchaeon] Length = 119 Score = 39.4 bits (90), Expect = 0.86, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 17/50 (34%), Gaps = 6/50 (12%) Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359 K+GD I Y + N +PTI I+ IR + Sbjct: 76 HRAKVGDTIIII---AYTLTPANN---RPVPTIVHVTDTNEIETIRRHTL 119 >gi|99082541|ref|YP_614695.1| D-3-hydroxyaspartate aldolase [Ruegeria sp. TM1040] gi|99038821|gb|ABF65433.1| D-3-hydroxyaspartate aldolase [Ruegeria sp. TM1040] Length = 387 Score = 39.4 bits (90), Expect = 0.86, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 39/134 (29%), Gaps = 7/134 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59 I+TP ++D L N+ + G++ + K + + + G Sbjct: 27 IQTPCLVLDLDALERNIKKMGDYARAHGMRHRVHGKMHKSVDVAKLQERLGGAIGVCCQK 86 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLNKFKDKAQKL 114 + E + + N +ID + + + + + AQK Sbjct: 87 VSEAEVFARGGIKDVLVSNQVRDPAKIDRLARLPKLGARTIVCVDDPANVADLSAAAQKH 146 Query: 115 HKKIGLRINPSVSY 128 +I + Sbjct: 147 DTEIECFVEIDCGA 160 >gi|327194730|gb|EGE61574.1| metal-activated pyridoxal enzyme [Rhizobium etli CNPAF512] Length = 387 Score = 39.4 bits (90), Expect = 0.87, Method: Composition-based stats. Identities = 20/187 (10%), Positives = 48/187 (25%), Gaps = 11/187 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59 I+TP ++D L N+ K ++ K + + + G Sbjct: 27 IQTPCLILDLDALERNIRKMGDYAKAHNMRHRAHGKMHKSVDVLRLQEKLGGAIGVCCQK 86 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQKL 114 + E + + N +ID + + + + + + A+K Sbjct: 87 VSEAEVFVRGGIKDVLVSNQVRDPAKIDRLARLPKLGARIIVCVDDPANVAELASAARKH 146 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 I + V + + + K ++ G+ + Sbjct: 147 GTTIECFVEIDVGA----GRCGVSSSAAVVDLAKAIAGAQGLRFAGVQAYQGAMQHIDKY 202 Query: 175 FSAMLKN 181 K Sbjct: 203 ADRKAKL 209 >gi|228965092|ref|ZP_04126189.1| Alanine racemase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794636|gb|EEM42145.1| Alanine racemase [Bacillus thuringiensis serovar sotto str. T04001] Length = 408 Score = 39.4 bits (90), Expect = 0.87, Method: Composition-based stats. Identities = 34/335 (10%), Positives = 88/335 (26%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 ID + +N++ + +K++ A+K A + + Sbjct: 30 IDLNAVKHNVNEFKKHVNDEKIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y ++ + + A +L KK+ + Sbjct: 90 IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 ++ S+ L + ++ E V G+ + E + Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 201 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + QI +I + ++ + + K + Sbjct: 202 SLFEKAVNTARELGIQIPYIHSSNSAGSIELSNTFQNMVRVGIGVYGMYPSKEVDHTIVS 261 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 322 NGIRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355 >gi|254454116|ref|ZP_05067553.1| threonine aldolase, low-specificity [Octadecabacter antarcticus 238] gi|198268522|gb|EDY92792.1| threonine aldolase, low-specificity [Octadecabacter antarcticus 238] Length = 387 Score = 39.4 bits (90), Expect = 0.87, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 31/135 (22%), Gaps = 9/135 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD--GTTS-- 57 I+TP ++D L N+ K G++ K + + G Sbjct: 27 IQTPCLILDLDALERNVKKMGDYAKAHGMRHRAHGKMHKSVDVLKLQQDMGAAIGVCCQK 86 Query: 58 SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLS----NCDTIIFNTVSQLNKFKDKAQK 113 S EV + V + + + D A Sbjct: 87 VSEAEV-FARGGIKDVMISNQVTEPAKIKRLAEMPKYGCRVLVCVDDPENVKNLSDAAVA 145 Query: 114 LHKKIGLRINPSVSY 128 +I + Sbjct: 146 AGTQIEALVEVDCGA 160 >gi|226946802|ref|YP_002801875.1| alanine racemase [Azotobacter vinelandii DJ] gi|226721729|gb|ACO80900.1| alanine racemase [Azotobacter vinelandii DJ] Length = 361 Score = 39.4 bits (90), Expect = 0.90, Method: Composition-based stats. Identities = 32/235 (13%), Positives = 62/235 (26%), Gaps = 23/235 (9%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63 LID L +N R+ G + L +K A A L DG + + E Sbjct: 7 LIDLAALRHNYRL---ARELGGARALAVVKADAYGHGAVRCARALEAEADGFAVACIEEA 63 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN-TVSQLNKFKDKAQKLHKKIGLRI 122 + E + + + D + QL + A L++ Sbjct: 64 LELREAGIAAPILLLEGFFESAELEPIQRHDLWCVVHSPWQLEAIERTALTRPLTCWLKL 123 Query: 123 NPSVSYSKF---ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK--------- 170 + + F + G+ + S + L E Sbjct: 124 DSGMHRVGFAPADYRAAHARLMASGKVARIVAMSHFARADELDCPRVAEQLAQFETATAG 183 Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222 F ++ +F EW+ G ++ ++ +L+ Sbjct: 184 LVAEFSLRNSPALLGWPQFFRHGHGDEWLRPGIMLYGATPFERYQEQAAQLRPVM 238 >gi|256824351|ref|YP_003148311.1| amino acid aldolase or racemase [Kytococcus sedentarius DSM 20547] gi|256687744|gb|ACV05546.1| predicted amino acid aldolase or racemase [Kytococcus sedentarius DSM 20547] Length = 371 Score = 39.4 bits (90), Expect = 0.90, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 2/77 (2%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYE 62 TP+ ++D+ +L N+D + + G L K + + G T ++L E Sbjct: 11 TPFAVVDRDRLQANIDRVARLAADRGQALRPHAKTHKCPQIAALQLEAGASGLTVATLGE 70 Query: 63 VML-GHEKFGGETHAYN 78 + AY Sbjct: 71 AEVFADAGCTDLLIAYP 87 >gi|228997192|ref|ZP_04156817.1| Alanine racemase [Bacillus mycoides Rock3-17] gi|229004853|ref|ZP_04162583.1| Alanine racemase [Bacillus mycoides Rock1-4] gi|228756406|gb|EEM05721.1| Alanine racemase [Bacillus mycoides Rock1-4] gi|228762586|gb|EEM11508.1| Alanine racemase [Bacillus mycoides Rock3-17] Length = 391 Score = 39.4 bits (90), Expect = 0.91, Method: Composition-based stats. Identities = 25/335 (7%), Positives = 83/335 (24%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 ++ + +N+ + + ++ A+K A + + Sbjct: 13 VNLDAVKHNVREFKKRVNDKNIAMMAAVKANGYGHGAVEVAKAAIEAGVNQLAVAFVDEG 72 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y + + + A++L KK + Sbjct: 73 IELREAGVTVPILVLGYTPVEVAKDAIGYDIMMTVYRIEDLKG---INEIAKQLEKKAHI 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENKSF--LCFS 176 ++ ++ + ++ + + G+ + E + Sbjct: 130 QVKID-----TGMSRIGLQEEEVAPFLEELKNMKYIEIEGMFTHYSTADEINKIYTNMQT 184 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + + +I + ++ + + K + Sbjct: 185 SLFEKAVNAAKEMGIHLPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHTVVS 244 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALI 304 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 305 NGIRVPVLGRVCMDQ-LMLDVTKAMPVQVGDEVVF 338 >gi|121610311|ref|YP_998118.1| alanine racemase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121554951|gb|ABM59100.1| D-3-hydroxyaspartate aldolase [Verminephrobacter eiseniae EF01-2] Length = 372 Score = 39.4 bits (90), Expect = 0.92, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 22/79 (27%), Gaps = 1/79 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 I TP ++D N+ AG++L K + + G + Sbjct: 15 IDTPALIVDLDAFERNMKKMAAFADLAGIRLRPHAKTHRCAAIALKQIQMGAVGQCCQKV 74 Query: 61 YEVMLGHEKFGGETHAYNV 79 E + + N Sbjct: 75 GEAEALVQGGVRDIFVSNE 93 >gi|291220866|ref|XP_002730436.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 357 Score = 39.4 bits (90), Expect = 0.93, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 23/82 (28%), Gaps = 2/82 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59 I TP ++D K+ N+D K KL K + Q G Sbjct: 26 IDTPALVVDLDKMERNMDKMTEFMKEFPSCKLRPHAKSHKCPAIARMQIQRGAVGVCVQK 85 Query: 60 LYEVMLGHEKFGGETHAYNVAY 81 + E + N Y Sbjct: 86 VTEAEAMVNGGIKDVLVTNEIY 107 >gi|332286614|ref|YP_004418525.1| alanine racemase, catabolic [Pusillimonas sp. T7-7] gi|330430567|gb|AEC21901.1| alanine racemase, catabolic [Pusillimonas sp. T7-7] Length = 388 Score = 39.4 bits (90), Expect = 0.93, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 54/166 (32%), Gaps = 8/166 (4%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLAL-KCFAAWGMFDTLNQYMDGTT--- 56 +P LID + +NL+ + L+ A+ K A + + Sbjct: 24 SPLALIDHTAIRHNLNRLRQLLAYPKTLPTPLIWAVAKADAYGHTLEHAYAGLCEADGLA 83 Query: 57 SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 +L E + G A + ++ + +I + QL + Sbjct: 84 VLTLDEARHCRSLGWTGPILAMSAQITQAALEDPILYPLHLIIDHQEQLAAIQSLRPPFS 143 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL 161 + LR ++++ F A ++ L +D +E+ ++ Sbjct: 144 PHVWLRYRGRLNHAGFDQAGYKSAYASLQSGLRDGRLAELGHLQHY 189 >gi|117923575|ref|YP_864192.1| alanine racemase [Magnetococcus sp. MC-1] gi|117607331|gb|ABK42786.1| alanine racemase [Magnetococcus sp. MC-1] Length = 396 Score = 39.4 bits (90), Expect = 0.93, Method: Composition-based stats. Identities = 29/309 (9%), Positives = 79/309 (25%), Gaps = 26/309 (8%) Query: 5 PYYL-IDKQKLLNNLDTALYIRKNAGVKL-LLAL-KC----FAAWGMFDTLNQYMDGTTS 57 P +L ID L +N R G ++ + K A + TL + DG Sbjct: 20 PTWLEIDLAALRHN---LRQARTATGPQVAHFPVIKADGYGIGAIAVAHTLEEEADGFCV 76 Query: 58 SSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + + E ++ Y E A+ + + + + ++ ++ Sbjct: 77 ALVEEAEQLRTAGINKRIMLFSGLYPGLEERAIRARVEPFLSDEINLNALWQAAKCYGPI 136 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + ++I+ ++ + +L + K+ + ++ + + + Sbjct: 137 SVHIKIDSGMARLGYHPEHVPSLLDQLAHMPELKLAGLVSHMACAD-DRHSPITNAQLAT 195 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 Q+ + + + Y ++ Y + A Sbjct: 196 LSPILEHPLVKQTQAQLSLANSATILGHPNAHYQW------VRPGIMIYGASPFFPHTNA 249 Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV---PDYLL-----YQESATIYPNTGPY 288 + V I + + Sbjct: 250 ANEGLQPVVRWVTHIQRIHTLEKGKSLGYGHTFTATRPTRIAQLPVGYADGYNRLWSNKG 309 Query: 289 TAMVCGRSC 297 + ++ G+ C Sbjct: 310 SVLIAGQHC 318 >gi|332365661|gb|EGJ43419.1| alanine racemase [Streptococcus sanguinis SK1059] Length = 369 Score = 39.4 bits (90), Expect = 0.94, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIDFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L GL Sbjct: 71 ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186 >gi|332363340|gb|EGJ41125.1| alanine racemase [Streptococcus sanguinis SK49] Length = 369 Score = 39.4 bits (90), Expect = 0.94, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIDFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L GL Sbjct: 71 ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186 >gi|324990138|gb|EGC22076.1| alanine racemase [Streptococcus sanguinis SK353] Length = 369 Score = 39.4 bits (90), Expect = 0.94, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIDFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L GL Sbjct: 71 ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186 >gi|323353285|ref|ZP_08087818.1| alanine racemase [Streptococcus sanguinis VMC66] gi|322121231|gb|EFX92994.1| alanine racemase [Streptococcus sanguinis VMC66] Length = 369 Score = 39.4 bits (90), Expect = 0.94, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIDFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L GL Sbjct: 71 ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186 >gi|87311059|ref|ZP_01093183.1| hypothetical protein DSM3645_18606 [Blastopirellula marina DSM 3645] gi|87286150|gb|EAQ78060.1| hypothetical protein DSM3645_18606 [Blastopirellula marina DSM 3645] Length = 371 Score = 39.4 bits (90), Expect = 0.94, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 1/65 (1%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSS 59 +I TP +ID + NL G+ + K + L Q G T + Sbjct: 12 LISTPAMVIDLPIVEKNLQKLHSYADQHGLHVRPHTKTHKSRYFARMQLKQGSSGLTVAK 71 Query: 60 LYEVM 64 + E Sbjct: 72 VGEAE 76 >gi|19111844|ref|NP_595052.1| alanine racemase Alr2 [Schizosaccharomyces pombe 972h-] gi|12229663|sp|Q9P5N3|ALR2_SCHPO RecName: Full=Putative alanine racemase C359.02 gi|7838267|emb|CAB91571.1| alanine racemase Alr2 [Schizosaccharomyces pombe] Length = 370 Score = 39.4 bits (90), Expect = 0.96, Method: Composition-based stats. Identities = 44/336 (13%), Positives = 90/336 (26%), Gaps = 33/336 (9%) Query: 8 LIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFA----AWGMFDTLNQYMD--GTTSSS 59 +ID + + N + + KN +L LK A A + L +Y G +S Sbjct: 7 VIDLRAIGYNYNLIRELLDEKNPDAHILCILKANAYGHGAVEVAQFLAKYCSAEGFGVAS 66 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 + E + + E + L + + K + Sbjct: 67 IEEALELRLSGIQNRILLLEGFFTDEDELSLIDKYNFSITIHCEEQLKSFMNYPFKKPVE 126 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE-NKSFLCFSAM 178 + + ++ K ++ KNV+G++ + Sbjct: 127 VHLKLDSGMNRLGFTPAEYAD-------KYRLLKNHKNVSGIVKATHFAFADIPEKSEYT 179 Query: 179 LKNIEKEFGHFITQIEWISLGGG---IHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 LK + +S GGG + + + + + + Y + Sbjct: 180 LKQWRIFEKAAGCLPDPLSAGGGVIVVGWLNTIHMDWLRTGSMLYGLDPYDLDAKAPELP 239 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY-----------QESATIYPN 284 + L +T++ + K+ I D L+ Q Sbjct: 240 KPLIPAMKLMSTIVCVKHVEKDQPIGYGGAYVTTRDSLIGVVAIGYGDGFPQVRNGCPVI 299 Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRIS 319 G+ C D+ + VK GD + Sbjct: 300 INGKRVPTVGKVC--MDMLAIDVTDVPDVKRGDDVV 333 >gi|254496840|ref|ZP_05109691.1| metal-activated pyridoxal enzyme [Legionella drancourtii LLAP12] gi|254353967|gb|EET12651.1| metal-activated pyridoxal enzyme [Legionella drancourtii LLAP12] Length = 375 Score = 39.4 bits (90), Expect = 1.00, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 45/165 (27%), Gaps = 6/165 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP ++DK L +NLD + L K + Y G ++ + Sbjct: 13 LDTPCLVLDKDILRSNLDVMRQHVITNKINLRPHCKTHKCSKLAQLQIDYGAIGVCAAKI 72 Query: 61 YEVMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E + + + + + + T++ + + A + + Sbjct: 73 SEAEVLIQNRIPNVLITSPIVTKNKITRLMACIETAPATLVVVDNEENILALNHAGESCQ 132 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL 161 K+ + + V K ++ + Sbjct: 133 KM-IHVLVDVDSGIGRTGVKPEHALNFAMKISALPWLKLMGIQCY 176 >gi|254501148|ref|ZP_05113299.1| Alanine racemase, N-terminal domain family [Labrenzia alexandrii DFL-11] gi|222437219|gb|EEE43898.1| Alanine racemase, N-terminal domain family [Labrenzia alexandrii DFL-11] Length = 351 Score = 39.4 bits (90), Expect = 1.00, Method: Composition-based stats. Identities = 32/259 (12%), Positives = 62/259 (23%), Gaps = 17/259 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSS-- 58 I+TP L+D N++ G+ L +K + LN G T Sbjct: 6 IQTPAVLVDLDIAEANIEAYQAYCTKHGLALRPHIKTHKLPFLAKRQLNAGAIGITCQKI 65 Query: 59 SLYEVMLGHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 S E M+ +N + +++ + S + D Sbjct: 66 SEAEAMIADGGINDVLITFNILGAEKLERLKALARKVRLSVVADNTSTVKGLSDAFSDTD 125 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNVNGLMFHNNCENKSFL 173 + + + R E +D + ++ + Sbjct: 126 SPLTVLVECDTGA--------ERCGVTSPEAAQDLAQVINQSPGLTFGGLMTYPPAGREA 177 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 L Q+ IS GG + V + + Sbjct: 178 EVHDWLTKARDMIEADALQVAVISNGGS-PGMWQADAVPVATEYRIGTYVYNDRSLVERG 236 Query: 234 GEAIVTNTTTLNTTVLDIS 252 T+ TV+ + Sbjct: 237 VCDWGDCALTVLATVVSVP 255 >gi|317034639|ref|XP_001400774.2| hypothetical protein ANI_1_238124 [Aspergillus niger CBS 513.88] Length = 416 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 20/181 (11%), Positives = 52/181 (28%), Gaps = 15/181 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD--GTTSSS 59 + TP ++ K L N++ + G+ +K + + G +S+ Sbjct: 19 LPTPSLILSKPVLEKNINRLQQDVQELGLSFRPHVKTLKTLEITRLMLANGLHRGLIAST 78 Query: 60 LYEVM----LGHEKFGGETHA------YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 L E+ L E E + + + + I+ ++ + + Sbjct: 79 LSELRGVLPLAEEGILNEALYGLPIYPSALPHLHSMRQSHPNLNILIMVDSPQHIPVIEA 138 Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNNC 167 + + + A + G + ++ + E V F+ + Sbjct: 139 FNKSTPNVRPWPVFIKLDV-GSRRAGVDVYSPDSGPELEELVNVVEESSAVELYGFYCHA 197 Query: 168 E 168 Sbjct: 198 G 198 >gi|134081446|emb|CAK41927.1| unnamed protein product [Aspergillus niger] Length = 424 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 20/181 (11%), Positives = 52/181 (28%), Gaps = 15/181 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD--GTTSSS 59 + TP ++ K L N++ + G+ +K + + G +S+ Sbjct: 19 LPTPSLILSKPVLEKNINRLQQDVQELGLSFRPHVKTLKTLEITRLMLANGLHRGLIAST 78 Query: 60 LYEVM----LGHEKFGGETHA------YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 L E+ L E E + + + + I+ ++ + + Sbjct: 79 LSELRGVLPLAEEGILNEALYGLPIYPSALPHLHSMRQSHPNLNILIMVDSPQHIPVIEA 138 Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNNC 167 + + + A + G + ++ + E V F+ + Sbjct: 139 FNKSTPNVRPWPVFIKLDV-GSRRAGVDVYSPDSGPELEELVNVVEESSAVELYGFYCHA 197 Query: 168 E 168 Sbjct: 198 G 198 >gi|134294396|ref|YP_001118131.1| carotenoid oxygenase [Burkholderia vietnamiensis G4] gi|134137553|gb|ABO53296.1| Carotenoid oxygenase [Burkholderia vietnamiensis G4] Length = 443 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 22/261 (8%), Positives = 56/261 (21%), Gaps = 13/261 (4%) Query: 38 CFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTI 96 + + + + + + G HA + I Sbjct: 102 ANPNVSVLRHAGELLALAEGGAPLAITAALDTLGEPARHAGLGGAMTAHPKLDPVTGELI 161 Query: 97 IFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK 156 +F + + + + + V + L Sbjct: 162 LFRADWREPWLRYGVADAYGVQRVDMVVDVRAPSMMHDLAITETRSLLLDL--------- 212 Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI-HFTDKDYPVKDFC 215 NV ++ L + + W + Y C Sbjct: 213 NVGYDFAMLKQGHRMPLRWHDERDARIGVLPRHGGDVRWFGIEPCFIQHVVNAYDCDPSC 272 Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYL 273 L + +++ G L V+D + + + + + + Sbjct: 273 IVLDVVRYPWFLRLDARTGRFADNPVGELWRYVIDTANGLIDEGPLADGGIELPRIDESR 332 Query: 274 LYQESATIYPNTGPYTAMVCG 294 + +Y P +A + G Sbjct: 333 TGRSYRYLYAAEQPDSAEMRG 353 >gi|159474868|ref|XP_001695545.1| hypothetical protein CHLREDRAFT_175110 [Chlamydomonas reinhardtii] gi|158275556|gb|EDP01332.1| predicted protein [Chlamydomonas reinhardtii] Length = 390 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 21/85 (24%), Gaps = 3/85 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDT-LNQYMD-GTTSS 58 + TP ++D N + + GV + K + L G Sbjct: 44 VDTPALILDLDAFDRNCEKLKGVMAGFPGVAVRPHAKAHKCAEVARRQLQLLGAKGVCCQ 103 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKD 83 + E E + N Sbjct: 104 KVIEAEAMAEGGVSDLLLSNEVIAP 128 >gi|257469535|ref|ZP_05633627.1| Serine racemase [Fusobacterium ulcerans ATCC 49185] gi|317063779|ref|ZP_07928264.1| serine racemase [Fusobacterium ulcerans ATCC 49185] gi|313689455|gb|EFS26290.1| serine racemase [Fusobacterium ulcerans ATCC 49185] Length = 369 Score = 39.0 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 65/211 (30%), Gaps = 15/211 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 +KTP L++ L NN+ T + + G +L +K + + + G +L Sbjct: 6 LKTPAILLNFDALENNIKTYQKMCDDNGKELWPMIKTHKSMELLKLQIEAGATGALCGTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSN-----CDTIIFNTVSQLNKFKDKAQKLH 115 E G + Y E + + + + D A Sbjct: 66 DEAEACCR-IGLKKIMYAYPAASKESIERIIELTKKSDFIVRLDNLEAAKMINDMAIAAG 124 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN---GLMFHNNCEN--- 169 + I P +K KD +++ ++ G ++ CEN Sbjct: 125 VVVSYTIIVDSGL--HRFGLPVDKIVEFADKLKDMKGLKLRGLSTHPGHVYSATCENEVP 182 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200 K + +K ++E+I+ G Sbjct: 183 KYIADECQTIAAAKKYMNDAGYELEYITSGS 213 >gi|332827252|gb|EGK00022.1| hypothetical protein HMPREF9455_03611 [Dysgonomonas gadei ATCC BAA-286] Length = 367 Score = 39.0 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 26/272 (9%), Positives = 77/272 (28%), Gaps = 23/272 (8%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTS 57 I +P ++ +++ N+D A+ I + KL +K + + + T Sbjct: 13 IDSPALVVYPERIQENIDLAIQIARGTN-KLRPHVKTNKMREVCAIMLKSGITKYKCATI 71 Query: 58 SSLYEV--------MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109 + + +L ++ G + K + D Sbjct: 72 AEAEMLALVNAPDVLLAYQPVGPKIERLIELIKAYPDTRFSCL-----VDNEENAKAISD 126 Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169 ++ + + + I+ ++ + + L + D I ++G H + E+ Sbjct: 127 LCRENNITLNIFIDLNIGMDRTGIKPEKAID--LVQAIIDLPRIHIAGLHGYDGHIHDED 184 Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE---FSEKYS 226 C + + E + + + +P+ + + + Sbjct: 185 TEIRCKKSDISFALAEKAYKEIKPLLPHPIALVMGGTPTFPIHIHRENCECSPGTFVFWD 244 Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258 + + + V+ I ++ Sbjct: 245 WGYKHMLEDLPFKYAAVVISRVISIIDSTHIC 276 >gi|170736332|ref|YP_001777592.1| alanine racemase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169818520|gb|ACA93102.1| alanine racemase domain protein [Burkholderia cenocepacia MC0-3] Length = 376 Score = 39.0 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 47/172 (27%), Gaps = 11/172 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID + N+ GV+ +K + D + G T S+L Sbjct: 6 LNTPAALIDVAHMQRNIARMQTHLDALGVRFRPHVKTTKCQQVVDAQIAAGAQGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V ++ I+ +++ + A Sbjct: 66 KEAEQFFAD-GIRDIVYAVGMVPAKLGQALALRRQGCDLKIVADSLPAAHAI--AAFGRE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + V P P + L + + G++ H Sbjct: 123 HGERFDVWIEVDVDGHRSGIP--PDADLLIDVGRALTDGGMLLGGVLAHAGS 172 >gi|85706729|ref|ZP_01037821.1| threonine aldolase, low-specificity [Roseovarius sp. 217] gi|85668787|gb|EAQ23656.1| threonine aldolase, low-specificity [Roseovarius sp. 217] Length = 387 Score = 39.0 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 54/187 (28%), Gaps = 13/187 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTS--- 57 I+TP ++D L N+ ++ G++ + K + L + + G Sbjct: 27 IQTPCLVLDLDALERNIKKMGDWARDHGMRHRVHGK--MHKSVDVALLQESLGGACGVCC 84 Query: 58 --SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--K 113 S EV + G + + +D L+ + T+ ++ + A Sbjct: 85 QKVSEAEV---FARGGIKDVLVSNQVRDPAKIDRLARMPKLGARTICCVDDLTNVADLSA 141 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173 +K G +I V + E K + G+ + Sbjct: 142 AAQKHGTQIECLVEIDCGAGRCGVTTTPAVVEIAKAIDAAPGLKFAGIQAYQGAMQHMDK 201 Query: 174 CFSAMLK 180 K Sbjct: 202 YEDRKAK 208 >gi|229043862|ref|ZP_04191559.1| Alanine racemase [Bacillus cereus AH676] gi|228725487|gb|EEL76747.1| Alanine racemase [Bacillus cereus AH676] Length = 408 Score = 39.0 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 ID + +N+ + +K++ A+K A + + Sbjct: 30 IDLDAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVDEA 89 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y ++ + + A +L KK+ + Sbjct: 90 IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 ++ S+ L + ++ E V G+ + E + Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 201 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + QI +I + ++ + + K + Sbjct: 202 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 261 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355 >gi|148543492|ref|YP_001270862.1| alanine racemase [Lactobacillus reuteri DSM 20016] gi|184152900|ref|YP_001841241.1| alanine racemase [Lactobacillus reuteri JCM 1112] gi|227363641|ref|ZP_03847755.1| alanine racemase [Lactobacillus reuteri MM2-3] gi|325681836|ref|ZP_08161355.1| alanine racemase [Lactobacillus reuteri MM4-1A] gi|166969414|sp|A5VI51|ALR_LACRD RecName: Full=Alanine racemase gi|226711051|sp|B2G5M9|ALR_LACRJ RecName: Full=Alanine racemase gi|148530526|gb|ABQ82525.1| alanine racemase [Lactobacillus reuteri DSM 20016] gi|183224244|dbj|BAG24761.1| alanine racemase [Lactobacillus reuteri JCM 1112] gi|227071310|gb|EEI09619.1| alanine racemase [Lactobacillus reuteri MM2-3] gi|324978927|gb|EGC15875.1| alanine racemase [Lactobacillus reuteri MM4-1A] Length = 375 Score = 39.0 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 60/192 (31%), Gaps = 11/192 (5%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDT-LNQYMDGTTSSSLYE 62 ++D L +N+ + K+L +K A + T + G + L E Sbjct: 12 IVDLDALRHNIQEQKKVLPE-NSKILAVVKANAYGNGLIPVAQTAMTSGASGLCVAILDE 70 Query: 63 VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + + T + + + A + ++ ++ L ++ AQ K L+ Sbjct: 71 ALELRDNGIEAMTLVLGITSVEDALIAAQAG-VSLTVGSLDWLEQYHQLAQVAKPKKPLK 129 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 ++ + + + + ++S G+ H + + Sbjct: 130 VHLGIDSGMGRIGFTEVAAFK---QAVKLLDSPEFEFEGMFTHFATADSPDENYFNQQVQ 186 Query: 182 IEKEFGHFITQI 193 +F + ++ Sbjct: 187 RWHQFVASLAEL 198 >gi|325681053|ref|ZP_08160585.1| alanine racemase [Ruminococcus albus 8] gi|324107282|gb|EGC01566.1| alanine racemase [Ruminococcus albus 8] Length = 374 Score = 39.0 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 32/335 (9%), Positives = 70/335 (20%), Gaps = 25/335 (7%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTL-----NQYMDGTTSSS 59 ID + N+ + AG +L+ +K + L +Y Sbjct: 11 IDLSAVEYNVTEYKKLLP-AGTELMYVVKAACYGHDDSLIVPFLQEKLGAEYFAVAD--- 66 Query: 60 LYEV-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 L E L G+ + N + K+ + Sbjct: 67 LDEAIRLRGMGISGDILILGYTLPEYAPLIAKHNVIQACTDLSYARELSKNAEGTVRVHG 126 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 + + + S + +E + + ++ + Sbjct: 127 AVDTGMTRIGVHGTAEEQAAELSEIAATPNIALEGIFTHFSSADGTAQADDDYTNMQAER 186 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE-AI 237 + +++ + + Y P E Sbjct: 187 FFRVRDLLTAGGIELKHAHIKNSAGGAYGFGEGSTLARLGIIMYGLYPDPAKPLPFEPKP 246 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----DYLLYQESATIYPNTGP-----Y 288 V + + V I + + N G Sbjct: 247 VMTWKAVVSQVKWIDAGTAVSYGRTFVSDRRMKLATITAGYADGYPRALSNKGEVIIGGK 306 Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323 +CGR C+ + ++ GD D Sbjct: 307 RCRICGRVCMDQ-FMCDVTDLPDIRSGDEAILMDA 340 >gi|148907442|gb|ABR16854.1| unknown [Picea sitchensis] Length = 43 Score = 39.0 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 17/38 (44%), Gaps = 1/38 (2%) Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364 ++ + +N + P DG++K IR + D+ Sbjct: 1 MSMASCYNLKSRPPEYWVADDGSVKKIRHVEMFEDHLR 38 >gi|317127511|ref|YP_004093793.1| alanine racemase domain protein [Bacillus cellulosilyticus DSM 2522] gi|315472459|gb|ADU29062.1| alanine racemase domain protein [Bacillus cellulosilyticus DSM 2522] Length = 367 Score = 39.0 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 74/204 (36%), Gaps = 11/204 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 I+TP ++D++KL N+D + + ++ GV + K + + + + G T ++ Sbjct: 7 IETPALILDEKKLNKNIDRMMKVSEH-GVTIRPHFKTHKSVWIAKRQIEKGASGITVATA 65 Query: 61 YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD---TIIFNTVSQLNKFKDKAQKLHK 116 E L E A+ +A + + + ++ Q+ + A++L Sbjct: 66 SEAELLFENGLTDILLAFPLADPVRLKKLLKWSKRARLILTVDSEEQVKIIEAIAKELIV 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 + I + + P + +E ++ G+ H + + C Sbjct: 126 TPEVWIKVNSG----LNRCGVEPGVEAFNLAECINNTETLDLTGMYTHAG-HSYAAKCEE 180 Query: 177 AMLKNIEKEFGHFITQIEWISLGG 200 + + ++E + +E G Sbjct: 181 EVNRIAKQEAESILRSVELCEKNG 204 >gi|90421986|ref|YP_530356.1| alanine racemase-like [Rhodopseudomonas palustris BisB18] gi|90104000|gb|ABD86037.1| alanine racemase-like [Rhodopseudomonas palustris BisB18] Length = 393 Score = 39.0 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 2/99 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60 + TP L+D+ +L N+ T + GV LK + + G T S+L Sbjct: 21 LATPCLLLDEARLRGNVATMKRHLEMLGVGFRPHLKTAKCLEVARIAMTHPGGPATVSTL 80 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN 99 E + Y V ++D V + + Sbjct: 81 REAEFFAAGGVRDMI-YAVGIAPQKLDRVGAIRKRFGAD 118 >gi|325690295|gb|EGD32299.1| alanine racemase [Streptococcus sanguinis SK115] Length = 369 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIDFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L GL Sbjct: 71 ALELRSAGIGKKILALGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLTRFH 186 >gi|296532599|ref|ZP_06895304.1| alanine racemase domain protein [Roseomonas cervicalis ATCC 49957] gi|296267090|gb|EFH13010.1| alanine racemase domain protein [Roseomonas cervicalis ATCC 49957] Length = 352 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 67/260 (25%), Gaps = 15/260 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 ++TP +ID + NL + G+ L +K + + G T L Sbjct: 6 LETPVPVIDLDVVEANLARMQAYCDSHGIALRPHIKTHKLPALARRQVELGARGITCQKL 65 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCD---TIIFNTVSQLNKFKDKAQKLHK 116 E + +Y + + + L + A+ Sbjct: 66 GEAEVMVEAGIDDILMSYPLLGAAKAARLAKLAPRARFRVGLDNAQSLATVAEAARLSGA 125 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176 +IG+ + ++ + L E + + +G+M + Sbjct: 126 EIGILVEFDSGTARTGVMTI----EELLELARAARATPGLRFDGVMTYPLG-----PKAR 176 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236 A L + IS GGG + + + Sbjct: 177 AFLDAALPRLKAEGLEPAVIS-GGGTPKAFEAHAAAPITELRVGTYIYNDRMTVAAGHAT 235 Query: 237 IVTNTTTLNTTVLDISENIK 256 L+ TV+ E + Sbjct: 236 WADCALHLHVTVISRPEAHR 255 >gi|70922820|ref|XP_734515.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56507329|emb|CAH84777.1| hypothetical protein PC301232.00.0 [Plasmodium chabaudi chabaudi] Length = 194 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 14/35 (40%) Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326 + G+SC D+ + I D I +E Y Sbjct: 160 IYGQSCDGLDMITSSTYLPECNINDWIIYEYSGAY 194 >gi|254502163|ref|ZP_05114314.1| Alanine racemase, N-terminal domain family [Labrenzia alexandrii DFL-11] gi|222438234|gb|EEE44913.1| Alanine racemase, N-terminal domain family [Labrenzia alexandrii DFL-11] Length = 387 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 15/134 (11%), Positives = 38/134 (28%), Gaps = 7/134 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59 I+TP ++D L N+ K G++ + K + + + G Sbjct: 27 IQTPCLVLDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVAKLQERLGGAVGVCCQK 86 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLNKFKDKAQKL 114 + E + + N +I + + + + + + A + Sbjct: 87 VSEAEVFARGGIKDVLVSNQVRDPAKIKRLAQLPKLGARTLVCVDDIDNVAELSAAAVEA 146 Query: 115 HKKIGLRINPSVSY 128 + + I Sbjct: 147 GTTLEVFIEIDCGA 160 >gi|213025495|ref|ZP_03339942.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 81 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 4/42 (9%), Positives = 11/42 (26%), Gaps = 5/42 (11%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD 46 P ++ D + + + A K + + Sbjct: 45 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILP 81 >gi|163747972|ref|ZP_02155301.1| hypothetical protein OIHEL45_19411 [Oceanibulbus indolifex HEL-45] gi|161378769|gb|EDQ03209.1| hypothetical protein OIHEL45_19411 [Oceanibulbus indolifex HEL-45] Length = 173 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 2/94 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLY 61 TP L+D+ ++ N+ GV L LK + + L G T S+L Sbjct: 10 DTPALLLDEARMERNISRLASHADALGVALRPHLKTAKSIDVARRLAGGTPGPITVSTLA 69 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT 95 E G Y V ++ + + + Sbjct: 70 EAE-VFFAAGHSDILYAVGIAPQKLKRIQALREK 102 >gi|33151809|ref|NP_873162.1| alanine racemase [Haemophilus ducreyi 35000HP] gi|71152228|sp|Q7VNC9|ALR_HAEDU RecName: Full=Alanine racemase gi|33148030|gb|AAP95551.1| alanine racemase [Haemophilus ducreyi 35000HP] Length = 374 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 33/256 (12%), Positives = 70/256 (27%), Gaps = 21/256 (8%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYEV 63 I +Q L +N+ + LLA+ K A TL +DG + L+E Sbjct: 8 ISRQALRHNIQLIKKLAPKQK---LLAMIKANAYGQGLLPAAATLADLVDGFGVARLHEA 64 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + E + D E + + + + QL + A++ + R Sbjct: 65 LEVQETGYTGKILLVEGFFDREELLKTLSRGFDTVIHCLEQLELLEQVAKEWQIEQQKRF 124 Query: 123 NPSVSYSKFILADPNRPF---SRLGEKCKD-----KIESEIKNVNGLMFHNN-CENKSFL 173 + F + + RLG + V + F ++ Sbjct: 125 WQRKTKIYFPINIWLKIDTGMHRLGIHPEQVDLFYARLKSCPLVATISFMSHFSRADELD 184 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233 C + E S+ + ++ + + + +P Sbjct: 185 CGYTEQQIATFEMATEQYSAHSRSIAASSGILYWPQAHY---EWVRPGIIMHGISPHYQP 241 Query: 234 GEAIVTNTTTLNTTVL 249 + ++ L Sbjct: 242 ITQLGFKPVMTLSSTL 257 >gi|315649168|ref|ZP_07902258.1| alanine racemase [Paenibacillus vortex V453] gi|315275387|gb|EFU38745.1| alanine racemase [Paenibacillus vortex V453] Length = 395 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 47/203 (23%), Gaps = 16/203 (7%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLA-LKCFA----AWGMFDTLNQYM-DGTTSSSLYE 62 I+ L N + LLA +K A A + L Q + + L E Sbjct: 12 INLDHLRANYNVFREAL--PKHMELLACVKANAYGHGAVEVARELQQLGAAYLSVAFLDE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + ++ TI + L K K K + + I Sbjct: 70 ALELRQGGISIPILVLGYTPPEAVETAYEYDVTITLFSSEVLKAIKALPVKPEKPLKVHI 129 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENKSFLCFSAMLK 180 + P ++ V G+ F E+ + Sbjct: 130 KIDSG----MGRLGLLPGEDALTFIEEACSLPQVVVEGMFTHFARADEHNKDYTLEQYRR 185 Query: 181 NI--EKEFGHFITQIEWISLGGG 201 I I G Sbjct: 186 FQGVADALRDKGYHIPIIHTGNS 208 >gi|332360532|gb|EGJ38342.1| alanine racemase [Streptococcus sanguinis SK1056] Length = 369 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L GL Sbjct: 71 ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWMDLALDAEEDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEVIHRLQAAGAVAEGI-FTHFATADEVDHYKFEAQLARFH 186 >gi|325473141|gb|EGC76337.1| alanine racemase [Treponema denticola F0402] Length = 379 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 61/201 (30%), Gaps = 13/201 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA--AWGM---FDTLNQYMDGTTSSSLYE 62 +I L N+ VK+ L +K A + + + +S+ E Sbjct: 7 IIHLDNLQYNIKEIKKRLNK-NVKICLPVKADAYGHGAVRVAVAAIRAGVSYLAVASIQE 65 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + ++ + + + + + ++ + + A+KL+KK G+ Sbjct: 66 AVELREAGIVAPIISLSLPVLEEIPELLKYDIEPLVIDEEFIND-LNRFAKKLNKKAGVH 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + +E + G+ H + + K Sbjct: 125 LKID-----TGMRRIGCSPMEAVKLAVQIDRAENLELKGVCTHFAVSDSTDEKNIKFTKK 179 Query: 182 IEKEFGHFITQIEWISLGGGI 202 F I +I+ + G+ Sbjct: 180 QISVFKDSIKEIKKAGINPGL 200 >gi|239624944|ref|ZP_04667975.1| D-threonine aldolase [Clostridiales bacterium 1_7_47_FAA] gi|239521330|gb|EEQ61196.1| D-threonine aldolase [Clostridiales bacterium 1_7_47FAA] Length = 374 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 22/208 (10%), Positives = 57/208 (27%), Gaps = 11/208 (5%) Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLYE 62 TP + + N+ A+ + G L +K M + + +++ E Sbjct: 15 TPALVYYLDIIKENIKKAVDLAGGPGY-LWPHVKTHKMAQMVRLQMEAGITRFKCATIAE 73 Query: 63 VMLGHEKFGGETHAY------NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 + G N++ + A C + + Q+ + Sbjct: 74 AEMAAGCGAGHVLVAYPLVGPNISRFIQLMQAYPKVCFWTVGDNEDQIRALGQLCSEAGL 133 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM---FHNNCENKSFL 173 + + ++ ++ + + + + D + + K Sbjct: 134 RANVLVDVNLGMDRTGVPVKDTEAFFMDCALMDGVSMMGLHCYDGHRTEHDFTQRKKEAD 193 Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGG 201 +A +K I + + LGG Sbjct: 194 TSAAQIKTICSHLCEKGYSCKTLVLGGS 221 >gi|228989810|ref|ZP_04149790.1| hypothetical protein bpmyx0001_5790 [Bacillus pseudomycoides DSM 12442] gi|228996000|ref|ZP_04155656.1| hypothetical protein bmyco0003_5960 [Bacillus mycoides Rock3-17] gi|229003617|ref|ZP_04161433.1| hypothetical protein bmyco0002_5900 [Bacillus mycoides Rock1-4] gi|228757659|gb|EEM06888.1| hypothetical protein bmyco0002_5900 [Bacillus mycoides Rock1-4] gi|228763773|gb|EEM12664.1| hypothetical protein bmyco0003_5960 [Bacillus mycoides Rock3-17] gi|228769957|gb|EEM18540.1| hypothetical protein bpmyx0001_5790 [Bacillus pseudomycoides DSM 12442] Length = 390 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 36/328 (10%), Positives = 94/328 (28%), Gaps = 17/328 (5%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT---SSSLY 61 P +D++ L N+++ + + V++ A K + + + S Sbjct: 12 PCAFLDEEALERNIESIVQLCGGKKVRI--ASKSLRSVPVMKKILASNSCFQGIMCFSPR 69 Query: 62 EVM-LGHEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 EV+ L + F Y + + ++L+ II V + + + G Sbjct: 70 EVIFLIKQGFNDLLLGYPVHDEQALQEISLLTKQGFIITCMVDCIEHIAYLEKIAIETGG 129 Query: 120 -LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178 RI + S + + K + + + + + A Sbjct: 130 RFRICIDIDMSSHFFQFHFGVRRSPIRTTSEALNVIEKAIQSSVL----QIDGVMGYEAQ 185 Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238 + + + + + +S + ++ ++ E+ ++ G Sbjct: 186 IAGVGDDVPKQGFKNKIVSY---LKRKSVFEVMERRQSVVRALQEQGITLRFVNGGGTGS 242 Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCL 298 TT + +V +I+ + + I + G + Sbjct: 243 IKTTMQDESVTEITIGSAFYSPKLFDYYKDIRFEPAVGFALPIVRQPSQHIYTCLGGGYM 302 Query: 299 AGDIFGEFHFEKPVKI-G-DRISFEDVA 324 A G+ + + G ++ E Sbjct: 303 ASGAVGKDKQPEIWEPSGAKLLALEGAG 330 >gi|149201464|ref|ZP_01878439.1| alanine racemase-like protein [Roseovarius sp. TM1035] gi|149145797|gb|EDM33823.1| alanine racemase-like protein [Roseovarius sp. TM1035] Length = 387 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 54/187 (28%), Gaps = 13/187 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTS--- 57 I+TP ++D L N+ ++ G++ + K + L + + G Sbjct: 27 IQTPCLVLDLDALERNIKKMGDWARDHGMRHRVHGK--MHKSVDVALLQESLGGACGVCC 84 Query: 58 --SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--K 113 S EV + G + + +D L+ + T+ ++ + A Sbjct: 85 QKVSEAEV---FARGGIKDVLVSNQVRDPAKIDRLARMPKLGARTICCVDDLTNVADLSA 141 Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173 +K G +I V + E K + G+ + Sbjct: 142 AAQKHGTQIECLVEIDCGAGRCGVTTTPAVVEIAKAIDAAPGLKFAGIQAYQGAMQHMDK 201 Query: 174 CFSAMLK 180 K Sbjct: 202 YEDRKAK 208 >gi|119900214|ref|YP_935427.1| alanine racemase [Azoarcus sp. BH72] gi|166919546|sp|A1KCI5|ALR_AZOSB RecName: Full=Alanine racemase gi|119672627|emb|CAL96541.1| alanine racemase [Azoarcus sp. BH72] Length = 353 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 43/141 (30%), Gaps = 8/141 (5%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63 LID L +N R G + L +K A A L DG + L E Sbjct: 7 LIDLDALRHNYRL---ARSRHGGRALAVVKANAYGHGAVRCAQALAAEADGFAVAFLDEA 63 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTV-SQLNKFKDKAQKLHKKIGLRI 122 + +T D + +Q+ + A I L++ Sbjct: 64 LELRAAGITQTIVLLEGVFDAAELEQVVAHGLWPVVHHAAQIEMIEQAALARPLDIWLKV 123 Query: 123 NPSVSYSKFILADPNRPFSRL 143 N ++ + F+ + RL Sbjct: 124 NSGMNRAGFVGDAVGSAWQRL 144 >gi|148360017|ref|YP_001251224.1| metal-activated pyridoxal enzyme [Legionella pneumophila str. Corby] gi|296108162|ref|YP_003619863.1| metal-activated pyridoxal enzyme [Legionella pneumophila 2300/99 Alcoy] gi|148281790|gb|ABQ55878.1| metal-activated pyridoxal enzyme [Legionella pneumophila str. Corby] gi|295650064|gb|ADG25911.1| metal-activated pyridoxal enzyme [Legionella pneumophila 2300/99 Alcoy] Length = 397 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 1/65 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP +ID +KL +NL+ G+ + K + +Y G +++ L Sbjct: 34 LDTPCLVIDYEKLKHNLEIMQQHGFTWGIGIRPHCKTHKCTQIARLQLEYGAIGISAAKL 93 Query: 61 YEVML 65 E Sbjct: 94 SEAAA 98 >gi|89092607|ref|ZP_01165560.1| alanine racemase [Oceanospirillum sp. MED92] gi|89083119|gb|EAR62338.1| alanine racemase [Oceanospirillum sp. MED92] Length = 358 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 34/332 (10%), Positives = 91/332 (27%), Gaps = 36/332 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEVM 64 I + + +N A + + G + +K A A + L+ DG + + E + Sbjct: 9 ISLEAIRHNYSLAKSVAPDQGALAI--IKANAYGHGAVEVAKALSDIADGFGVACIEEAI 66 Query: 65 LGHEKFGGETH-----AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E ++ D L +++Q++ KI Sbjct: 67 ELREAGIKLPILLLEGFFSADELDYISRENLWCAVH----SLAQIDIIAAAKIDTPIKIW 122 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179 L+++ + D + RL + ++K V + ++ + + + Sbjct: 123 LKMDSGMHRLGVAPDDYQEAYQRLNDLT------QVKEVVLMTHFSSADEPDLAVTAEQI 176 Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239 +K + + G + + + + + + + Sbjct: 177 ALFDKVTQGIEADVSLANSAGTMAYPEARRSWQRPG----IMLYGATPFAMPQEVADKLK 232 Query: 240 NTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294 TL++ V+ + + V + +V G Sbjct: 233 PAMTLSSEVIAVRDLEPGEAVGYSCTWVCDKPTRVGTVAMGYADGYPRYAKSGTPVLVNG 292 Query: 295 RSCL-----AGDIFGEFHFE-KPVKIGDRISF 320 + + D+ + ++G + F Sbjct: 293 QKSQIIGRVSMDMLAVDLTDIPDAEVGSYVEF 324 >gi|169824891|ref|YP_001692502.1| alanine racemase [Finegoldia magna ATCC 29328] gi|167831696|dbj|BAG08612.1| alanine racemase [Finegoldia magna ATCC 29328] Length = 391 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 95/342 (27%), Gaps = 33/342 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM-DGTTSSSLYEV 63 +D KL +N I VK+ +K A A + L D S++ E Sbjct: 10 VDLDKLKHNYKEIKNISNL--VKMCAVVKANAYGQGAAFITKELEYLGIDYFAVSNINEA 67 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + + I+ + N + + + A+ L+K + I Sbjct: 68 LELRKNGIFKPIMILGYISNENIEVAIKNNIELTVYDYDTAVEINNVAKSLNKICKVHIK 127 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L E ++ NV +++ + +S + Sbjct: 128 IDTGMTRLGFQVRLDRDKCLEEI---FKIYKMDNVVLQGIYSHFSDADSEDYSYTKEQYN 184 Query: 184 KEFGHF------ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 G + + Y D + ++ E Sbjct: 185 TYIGFMIDVENRGITVPIKHIANDAGAIIHGY-FLDMIRCGIGLYGYHASDYVRENSRLN 243 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTG---- 286 + ++L TTV I K I + + N Sbjct: 244 LEEISSLYTTVSMIKTVPKGTDIGYGRTFTTNSETVVATATIGYADGYPLELSNKAYVII 303 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE---DVA 324 A + G+ C+ I + + + VK+GD++ D+ Sbjct: 304 NGKKAKILGKVCMDQ-IMIDVTYIRDVKVGDKVLLFGKDDMG 344 >gi|90577958|ref|ZP_01233769.1| threonine aldolase, low-specificity [Vibrio angustum S14] gi|90441044|gb|EAS66224.1| threonine aldolase, low-specificity [Vibrio angustum S14] Length = 368 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 15/136 (11%), Positives = 32/136 (23%), Gaps = 8/136 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP ++D K+ NN+ + L K + + G ++ L Sbjct: 6 LPTPALIVDFDKMKNNIHEMQQRIDALQLNLRPHTKAHKSPTIAKMQIDAGAQGICTAKL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-------IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113 E + + + + + + + A Sbjct: 66 GEAEVMAAGGINDILITTPIAGKNKIQRLVKLYQQYPDYRFIQVIDHKQHIIDISEAATD 125 Query: 114 LHKKIGLRINPSVSYS 129 I L I Sbjct: 126 AGICIELMIEVESGQQ 141 >gi|163740918|ref|ZP_02148311.1| hypothetical protein RG210_13796 [Phaeobacter gallaeciensis 2.10] gi|161385909|gb|EDQ10285.1| hypothetical protein RG210_13796 [Phaeobacter gallaeciensis 2.10] Length = 382 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 5/133 (3%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60 ++TP ++D+ K++ N+ GV L LK + + L G T S+L Sbjct: 11 LQTPALVLDETKMMRNIQRLAKQVDGLGVSLRPHLKTVKSTEISRRLLTDGSGPATVSTL 70 Query: 61 YEVMLGHEKFGGETH---AYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116 E + E + D CD ++ ++V+Q + D + +L Sbjct: 71 IEAEVFAEAGVKDIIYAVGITPQKLDRVAAIRSKGCDLAVVLDSVAQAHAVADASARLGL 130 Query: 117 KIGLRINPSVSYS 129 I I Sbjct: 131 AIPALIELDCDGH 143 >gi|311032754|ref|ZP_07710844.1| alanine racemase domain protein [Bacillus sp. m3-13] Length = 390 Score = 38.6 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 57/170 (33%), Gaps = 10/170 (5%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61 TP ++D Q LL N+ K V L +K + + ++ G T++ L Sbjct: 9 DTPTLILDGQILLKNIRKMSDFAKENKVNLRPHIKTHKSVEIAKLQLEHGAIGITTAKLE 68 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLNKFKDKAQKLHK 116 E + + +I+ +++ D I +++ Q+ + +K Sbjct: 69 EAEVMAASGIKDILVAYPVSSPAKIERIIALLDQEVDLKITVDSLEQVKLLQKALEKTSH 128 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166 + + I + + P R E K I + G+ H Sbjct: 129 SLEVWIKVNSG----LNRCGVEPGERAVELAKAIILLSRLRIGGIFTHAG 174 >gi|254510187|ref|ZP_05122254.1| threonine aldolase, low-specificity [Rhodobacteraceae bacterium KLH11] gi|254512679|ref|ZP_05124745.1| threonine aldolase, low-specificity [Rhodobacteraceae bacterium KLH11] gi|221532678|gb|EEE35673.1| threonine aldolase, low-specificity [Rhodobacteraceae bacterium KLH11] gi|221533898|gb|EEE36886.1| threonine aldolase, low-specificity [Rhodobacteraceae bacterium KLH11] Length = 387 Score = 38.6 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 39/134 (29%), Gaps = 7/134 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59 I+TP ++D L N+ K G++ + K + + + G Sbjct: 27 IQTPCLVLDLDALERNIVKMGDYAKAHGMRHRVHGKMHKSVDVAKLQEKLGGAIGVCCQK 86 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSN-----CDTIIFNTVSQLNKFKDKAQKL 114 + E + + N +ID + + + V + A K Sbjct: 87 VSEAEVFARGGIKDVLVSNQVRDPAKIDRLARLPKLGAHVIVCVDDVDNVADLSAAAVKH 146 Query: 115 HKKIGLRINPSVSY 128 ++ + + Sbjct: 147 GTELSVFVEIDCGA 160 >gi|303234171|ref|ZP_07320817.1| alanine racemase [Finegoldia magna BVS033A4] gi|302494712|gb|EFL54472.1| alanine racemase [Finegoldia magna BVS033A4] Length = 391 Score = 38.6 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 95/342 (27%), Gaps = 33/342 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM-DGTTSSSLYEV 63 +D KL +N I VK+ +K A A + L D S++ E Sbjct: 10 VDLDKLKHNYKEIKNISNL--VKMCAVVKANAYGQGAAFITKELEYLGIDYFAVSNINEA 67 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + + I+ + N + + + A+ L+K + I Sbjct: 68 LELRKNGIFKPIMILGYISNENIEVAIKNNIELTVYDYDTAVEINNVAKSLNKICKVHIK 127 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 ++ L E ++ NV +++ + +S + Sbjct: 128 IDTGMTRLGFQVRLDHDKCLEEI---FKIYKMDNVVLQGIYSHFSDADSEDYSYTKEQYN 184 Query: 184 KEFGHF------ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237 G + + Y D + ++ E Sbjct: 185 TYIGFMIDVENRGITVPIKHIANDAGAIIHGY-FLDMIRCGIGLYGYHASDYVRENSRLN 243 Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTG---- 286 + ++L TTV I K I + + N Sbjct: 244 LEEISSLYTTVSMIKTVPKGTDIGYGRTFTTNSETVVATATIGYADGYPLELSNKAYVII 303 Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE---DVA 324 A + G+ C+ I + + + VK+GD++ D+ Sbjct: 304 NGKKAKILGKVCMDQ-IMIDVTYIRDVKVGDKVLLFGKDDMG 344 >gi|220926980|ref|YP_002502282.1| alanine racemase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219951587|gb|ACL61979.1| alanine racemase domain protein [Methylobacterium nodulans ORS 2060] Length = 359 Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 2/83 (2%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61 +P +ID ++ N+ AG+ +K + + + G T +L Sbjct: 13 GSPAVMIDLDQVERNIARLQAACDAAGLANRPHIKTHKSPVLARLQQEAGARGLTCQTLG 72 Query: 62 EVM-LGHEKFGGETHAYNVAYKD 83 E + +YN+ + Sbjct: 73 EAEVMAEAGLSDILISYNLVGPE 95 >gi|325693570|gb|EGD35489.1| alanine racemase [Streptococcus sanguinis SK150] Length = 369 Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIAFNIRQLSAQLPQTTEK--WAVVKANAYGHGAIEVSRYIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L GL Sbjct: 71 ALELRSAGIGKKILVLGVSDLAALSLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186 >gi|33591729|ref|NP_879373.1| putative metal-activated pyridoxal enzyme [Bordetella pertussis Tohama I] gi|33571372|emb|CAE44851.1| putative metal-activated pyridoxal enzyme [Bordetella pertussis Tohama I] gi|332381147|gb|AEE65994.1| putative metal-activated pyridoxal enzyme [Bordetella pertussis CS] Length = 381 Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 42/172 (24%), Gaps = 11/172 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP ++D ++ +N+ GV L +K + L G T S+L Sbjct: 12 LDTPAAIVDVARMQHNIARMQDRMNGLGVSLRPHVKTSKCTPVALAQLAAGAHGVTVSTL 71 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V + II + D Sbjct: 72 KEAEQFFAA-GITDILYAVGMAEHRLPAALALRRRGCDLKIITDNAGSARAIAD--FGRA 128 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + +P + + G+M H Sbjct: 129 HDEVFEVWIEIDTDGHR--SGIKPEEAALLAVGAALHEGGMRLGGVMTHAGS 178 >gi|307320836|ref|ZP_07600246.1| alanine racemase domain protein [Sinorhizobium meliloti AK83] gi|306893546|gb|EFN24322.1| alanine racemase domain protein [Sinorhizobium meliloti AK83] Length = 352 Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 26/258 (10%), Positives = 63/258 (24%), Gaps = 14/258 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 I+TP L+D N+ G+++ +K M + G T + Sbjct: 5 IETPAVLVDLDIARRNVVAFQAYADRHGIRVRPHIKTHKLPQMAELQLDTGAIGITCQKV 64 Query: 61 YEVML---GHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114 E G + YN +++ + + ++ Sbjct: 65 TEAEAMVDGSARIKDVLITYNLLGEEKLARLARLNERVTVSVVGDNATVVDGLAAFFADA 124 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 K + + + + D + + +E + Sbjct: 125 GKPLTVLVECNTGA------DRCGVGTPSEAARLARRIAEAPGLRFGGLMTYPPADGAAR 178 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234 A + ++ ++ I+ GG R + + Sbjct: 179 VQAFMSEAKRLIEAEGLEVPCITSGGTPGMMQAAEAPIASEHRPGTYIY-NDRSLVARGV 237 Query: 235 EAIVTNTTTLNTTVLDIS 252 + T+ TV+ + Sbjct: 238 ASWEDCALTVLATVVSVP 255 >gi|290993126|ref|XP_002679184.1| predicted protein [Naegleria gruberi] gi|284092800|gb|EFC46440.1| predicted protein [Naegleria gruberi] Length = 437 Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 42/138 (30%), Gaps = 13/138 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-----LNQYMDGTT 56 +KTP +++D ++ N + + G+ L +K L + + Sbjct: 64 MKTPCFVVDLERFERNCQNMIKKASDCGISLRPHVKTHKTLEGARLQTKDMLERKIV--- 120 Query: 57 SSSLYEVMLGHEKFGGETH----AYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKA 111 S+L E + H + + + + I + L+ +D A Sbjct: 121 VSTLAEAEFYGSDMFNDIHYAVPISSKSKLEQVAKLTQNLKAFHIEVDNEDSLDLIEDYA 180 Query: 112 QKLHKKIGLRINPSVSYS 129 + K L + Sbjct: 181 KLNKVKFSLFVQVDSGQH 198 >gi|163760387|ref|ZP_02167469.1| alanine racemase-like protein [Hoeflea phototrophica DFL-43] gi|162282338|gb|EDQ32627.1| alanine racemase-like protein [Hoeflea phototrophica DFL-43] Length = 387 Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 35/135 (25%), Gaps = 9/135 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57 I+TP ++D L N+ K+ GV+ + K + + + G Sbjct: 27 IQTPCLVLDLDALERNIIKMGEQAKSMGVRHRVHGKMHKSVDVAKLQERLGGAVGVCCQK 86 Query: 58 SSLYEVMLGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIF-NTVSQLNKFKDKAQK 113 S E + + D TI + + + A + Sbjct: 87 VSEAEA-FARGGIKDVLISNQVRDPLKIDRLARMPKLGARTICCVDDAANIADLSQAAVR 145 Query: 114 LHKKIGLRINPSVSY 128 + + Sbjct: 146 HGTMVECLVEIDCGA 160 >gi|328945680|gb|EGG39831.1| alanine racemase [Streptococcus sanguinis SK1087] Length = 369 Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 17/180 (9%), Positives = 45/180 (25%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + + ++ + L GL Sbjct: 71 ALELRSAGISKKILVLGVSDLAALPLSRKGKVSLTVAS---LEWLDLALDAEEDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEVIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186 >gi|187779310|ref|ZP_02995783.1| hypothetical protein CLOSPO_02906 [Clostridium sporogenes ATCC 15579] gi|187772935|gb|EDU36737.1| hypothetical protein CLOSPO_02906 [Clostridium sporogenes ATCC 15579] Length = 386 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 51/160 (31%), Gaps = 5/160 (3%) Query: 7 YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYMD-GTTSSSLYEVM 64 Y+ID +++N G++L K F + L + G + E + Sbjct: 31 YIIDLDNIVDNARKIKEEADKYGIELYFMTKQFGRNPIVCHELMKLGYKGAVTVDFKEAI 90 Query: 65 LGHEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E H ++ + + I +V + + AQKL + I Sbjct: 91 TLKENNISLGHVGHLVQIPTHSMEDIIEAKPEVITVYSVEKAVEVSKVAQKLGLVQNIMI 150 Query: 123 NPSVSYSKFILADPNRPFSR-LGEKCKDKIESEIKNVNGL 161 A + + L EK K+ + N+ G+ Sbjct: 151 RVLDDEDTLYPAQYGGFYLKDLIEKAKEIKKLPNINIYGI 190 >gi|126668086|ref|ZP_01739049.1| putative D-b-hydroxy-aspartate aldolase [Marinobacter sp. ELB17] gi|126627477|gb|EAZ98111.1| putative D-b-hydroxy-aspartate aldolase [Marinobacter sp. ELB17] Length = 387 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 36/135 (26%), Gaps = 9/135 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59 I+TP ++D L N+ K G++ + K + + G Sbjct: 27 IQTPCLILDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVARLQEDLGGAIGVCCQK 86 Query: 60 LYEVML-GHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQK 113 E + + N +ID + + V ++ QK Sbjct: 87 PSEAEVFARAGI-KDVLVSNQVRDPLKIDRLAQLPKYGGRIIVCVDDVDNVSDLSMACQK 145 Query: 114 LHKKIGLRINPSVSY 128 ++ + Sbjct: 146 HSTELHCFVEIDCGA 160 >gi|119944622|ref|YP_942302.1| arginine decarboxylase [Psychromonas ingrahamii 37] gi|119863226|gb|ABM02703.1| arginine decarboxylase [Psychromonas ingrahamii 37] Length = 637 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 85/324 (26%), Gaps = 51/324 (15%) Query: 5 PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53 P + Q + ++ + NA L+ +K + + + D Sbjct: 62 PALVRFPQIIHQRVNGLCEVFNNAIEQYQYNEKYLLVYPIKVNQQREVVNEILASQDNKE 121 Query: 54 ----GTTSSSLYEVMLGHEKF--GGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102 G + S E++ N + L + ++ +S Sbjct: 122 VKQLGLEAGSKAELLAVLALAQKASSVIVCNGYKDREYVRLALIGEKLGHKVHLVLEKMS 181 Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155 +L +A+KL+ L I S K S+ G ++ Sbjct: 182 ELEMILSEAKKLNVAPRLGIRVRLASQGKGKWQASGGEKSKFGLSASQVLKVLDVLKENN 241 Query: 156 --KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207 + + FH + + + E +I + +GGG+ Sbjct: 242 KLDTLQLVHFHLGSQIANIRDVRLGVSEAARFYCELRDLGAEITCMDVGGGLAVDYDGTR 301 Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE 253 +Y + ++ + I E G ++ + L + V+ Sbjct: 302 SQSHNSMNYSLAEYANNIVYTIGDICKSYDQPVPMIISESGRSLTAHHAVLISNVIGAES 361 Query: 254 NIKNLVIVDSSVEAHVPDYLLYQE 277 + ++ + + Sbjct: 362 YAPEKLTNPKKNDSLLLKNMWQSW 385 >gi|326939811|gb|AEA15707.1| alanine racemase [Bacillus thuringiensis serovar chinensis CT-43] Length = 391 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 32/335 (9%), Positives = 86/335 (25%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 ID + +N+ + +K++ A+K A + + Sbjct: 13 IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 72 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y ++ + + A +L KK+ + Sbjct: 73 IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 ++ ++ + ++ E V G+ + E + Sbjct: 130 QVKID-----TGMSRIGLQEEEVKPFLEELNRMEYIEVVGIFTHYSTADEIDKSYTNMQT 184 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + QI +I + ++ + + K + Sbjct: 185 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 244 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 304 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 305 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338 >gi|324995181|gb|EGC27093.1| alanine racemase [Streptococcus sanguinis SK678] gi|327469131|gb|EGF14603.1| alanine racemase [Streptococcus sanguinis SK330] gi|327473513|gb|EGF18933.1| alanine racemase [Streptococcus sanguinis SK408] gi|327489061|gb|EGF20856.1| alanine racemase [Streptococcus sanguinis SK1058] Length = 369 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 47/180 (26%), Gaps = 11/180 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62 +ID + N+ K A+ K A A + + +DG S++ E Sbjct: 13 VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + G+ + ++ + L+ GL Sbjct: 71 ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LDWLDLALDAEEDLTGLNF 127 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182 + + + + ++ + + + F E + + + + Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQVAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186 >gi|75343523|sp|O82872|DTA_ARTSP RecName: Full=D-threonine aldolase gi|3299792|dbj|BAA31547.1| metal-activated pyridoxal enzyme [Arthrobacter sp.] Length = 379 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 24/210 (11%), Positives = 49/210 (23%), Gaps = 12/210 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP ++D NL V L K + L G + Sbjct: 24 VDTPSLVLDLAPFEANLRAMQAWADRHDVALRPHAKAHKCPEIALRQLALGARGICCQKV 83 Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119 E + + V I V + +Q + + G Sbjct: 84 SEALPFVAAGIQDIHISNEVVGPAKLALLGQLARVAKISVCVDNAHNLSQVSQAMV-QAG 142 Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS-------- 171 +I+ V + + + + N GL ++ Sbjct: 143 AQIDVLVEVDVGQGRCGVSDDALVLALAQQARDLPGVNFAGLQAYHGSVQHYRTREERAE 202 Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGG 200 + + + + + I+ GG Sbjct: 203 VCRQAARIAASYAQLLRESGIACDTITGGG 232 >gi|256828939|ref|YP_003157667.1| alanine racemase domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256578115|gb|ACU89251.1| alanine racemase domain protein [Desulfomicrobium baculatum DSM 4028] Length = 382 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 4/83 (4%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLY 61 TP L+D++++ N+ + A V LK +W + L G T S+L Sbjct: 13 GTPCLLVDEERMERNIARLRDRLRAAEVAFRPHLKTAKSWEVSRLLMTTPQGPATVSTLR 72 Query: 62 EV-MLGHEKFGGETHAYNVAYKD 83 E L + Y V Sbjct: 73 EAEELAAHGV--KDITYAVGISP 93 >gi|330501216|ref|YP_004378085.1| alanine racemase [Pseudomonas mendocina NK-01] gi|328915502|gb|AEB56333.1| alanine racemase [Pseudomonas mendocina NK-01] Length = 357 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 8/141 (5%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63 LID L +N R+ +G + L +K A A L DG + + E Sbjct: 7 LIDLDALRHNYQL---ARELSGARALAVVKADAYGHGAVRCAQALEAEADGFAVACIEEA 63 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNT-VSQLNKFKDKAQKLHKKIGLRI 122 + E G + + + A++ D Q+ + + L++ Sbjct: 64 LALREAGIGAPILLLEGFFETDELALIDQHDLWCVVHAQWQIEAIEQAQLSKPLSVWLKL 123 Query: 123 NPSVSYSKFILADPNRPFSRL 143 + + +D + + RL Sbjct: 124 DSGMHRVGLHPSDYQQAYRRL 144 >gi|253576997|ref|ZP_04854320.1| alanine racemase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843607|gb|EES71632.1| alanine racemase [Paenibacillus sp. oral taxon 786 str. D14] Length = 392 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 22/203 (10%), Positives = 47/203 (23%), Gaps = 16/203 (7%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM-DGTTSS---SL 60 ID L +N + +++ + +K A A + L Q D + + Sbjct: 12 IDLDALRSNFEELRRRQQDMKMLAC--VKANAYGHGAVPVAKELEQIGADYLSVAFLDEA 69 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ + Y + + T+ + L + Sbjct: 70 LELRKAGIQLPILVLGYTP---PHGVRTAWEHDVTLNVFSNEVLEAIEALNPAEFPHKLK 126 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180 S + P K E++ + + E + Sbjct: 127 VHIKIDSGMGRVGLLPGDEAVAFVRKAMQVPHVEVEGL-FTHYATADEEDKSYTLEQYRR 185 Query: 181 NI--EKEFGHFITQIEWISLGGG 201 + +I I G Sbjct: 186 FQGVVEALREHNIRIPIIHTGNS 208 >gi|262402336|ref|ZP_06078897.1| alanine racemase [Vibrio sp. RC586] gi|262351118|gb|EEZ00251.1| alanine racemase [Vibrio sp. RC586] Length = 407 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 51/167 (30%), Gaps = 10/167 (5%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKC----FAAWGMFD-TLNQYMDGTTSSSLYEV 63 I + +N++ N+ K+ +K G+ + Q + +S E Sbjct: 47 ISLGQFQSNIEQFKSHM-NSDTKICAIMKADAYGNGIRGLMPTIIAQGILCVGVASNAEA 105 Query: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 E F GE A + N + +I + + A+K K + + + Sbjct: 106 RAVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQAME-LAELAKKNGKTVKVHM 164 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169 + D + ++ N+ G+M H N Sbjct: 165 ALNDGGMGRNGIDMTTEAGK--KEAVSIATQPSLNIVGIMTHFPNYN 209 >gi|253744161|gb|EET00405.1| Hypothetical protein GL50581_2360 [Giardia intestinalis ATCC 50581] Length = 731 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 42/147 (28%), Gaps = 6/147 (4%) Query: 13 KLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFG 71 L T I + + ALK F + L + E+ L KF Sbjct: 21 TLRELFGTLSVILNKSASSTIYALKGFPNLAV-KELRVGSLEACAVRDMELELAILPKFS 79 Query: 72 -GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSK 130 Y+ A +D E ++ N + +K + + + + S Sbjct: 80 HPHILKYHQALRDGETIYIIMNRHQRTVENMLVRHK---RTKHPIPEQKILCILEQVASG 136 Query: 131 FILADPNRPFSRLGEKCKDKIESEIKN 157 + G+ D + +K+ Sbjct: 137 LAYLHDSNKTDVNGDHLPDIVHRNVKH 163 >gi|261409040|ref|YP_003245281.1| alanine racemase [Paenibacillus sp. Y412MC10] gi|261285503|gb|ACX67474.1| alanine racemase [Paenibacillus sp. Y412MC10] Length = 395 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 39/159 (24%), Gaps = 12/159 (7%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLA-LKCFA----AWGMFDTLNQYM-DGTTSSSLYE 62 I+ L N + LLA +K A A + L Q + + L E Sbjct: 12 INLDHLRANYNAFREAL--PDHMKLLACVKANAYGHGAVEVARELQQLGAAYLSVAFLDE 69 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + + TI + L K K K + + I Sbjct: 70 AIELRQGGISVPILVLGYTPPEAVGIAYEYDVTITLFSSEVLQAIKALPVKPEKPLKVHI 129 Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL 161 + P ++ V G+ Sbjct: 130 KIDSG----MGRLGLLPGEDAISFIEEAFSLPQVVVEGM 164 >gi|253583474|ref|ZP_04860672.1| alanine racemase [Fusobacterium varium ATCC 27725] gi|251834046|gb|EES62609.1| alanine racemase [Fusobacterium varium ATCC 27725] Length = 364 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 81/331 (24%), Gaps = 29/331 (8%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMD-GTTSSSLYEV 63 ID L NL+ + V + +K + A + L+++ +SL E Sbjct: 7 IDMDNLKYNLNKIKELVHGTNVLGV--IKANSYGFGAIEIAKELSKFGIEIFGVASLEEA 64 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 M E E + + EI+ I +++ Q+ + I + Sbjct: 65 MELREGGIEEEILILGSLFNDEIEIAAEKKFQITVSSMRQIEFLESNKIDAEIHIKIDTG 124 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 G K D + V G+ H + + K Sbjct: 125 MGRLGFT----------PSEGRKAVDYCINRGLKVVGIYSHLSDADGMNDEAYNYTKEQI 174 Query: 184 KEFG--HFITQIEWISLGGGIHFTDKDYPVKDF-CQRLKEFSEKYSVQIYLEPGEAIVTN 240 +F I++I + + K + + Sbjct: 175 NKFKIFEEYKTIKYIHILNSGGILRFNDGFKGNLVRAGICMYGMLGNERVPGFKRVFTMK 234 Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-------YTAMVC 293 T L L+ I + + + + Sbjct: 235 TRILFIRTLEEDSYISYGRTIKLKKGETFATLAIGYADGMKKEFSNKTYALIEGEKCPIV 294 Query: 294 GRSCLAGDIF-GEFHFEKPVKIG-DRISFED 322 G C+ + K + IG + I D Sbjct: 295 GEICMDMCMVKIPESILKKINIGTEAIVIRD 325 >gi|254440988|ref|ZP_05054481.1| Alanine racemase, N-terminal domain family [Octadecabacter antarcticus 307] gi|198251066|gb|EDY75381.1| Alanine racemase, N-terminal domain family [Octadecabacter antarcticus 307] Length = 394 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 19/128 (14%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61 I+TP ++D L N+ K G++ + K +++ + L Sbjct: 33 IQTPCLVLDLDALERNIKKMGDYAKAHGMRHRVHGK----------MHKS---VDVAMLQ 79 Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 E K GG + E+ A D ++ N V+ K A+ + Sbjct: 80 E------KLGGAVGVCCQKVSEAEVFARGGIKDVMVSNQVTAPAKIDRLARMPKLGARVL 133 Query: 122 INPSVSYS 129 + Sbjct: 134 CCVDDPEN 141 >gi|228907821|ref|ZP_04071674.1| Alanine racemase [Bacillus thuringiensis IBL 200] gi|228851823|gb|EEM96624.1| Alanine racemase [Bacillus thuringiensis IBL 200] Length = 408 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 32/335 (9%), Positives = 86/335 (25%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 ID + +N+ + +K++ A+K A + + Sbjct: 30 IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y ++ + + A +L KK+ + Sbjct: 90 IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 ++ ++ + ++ E V G+ + E + Sbjct: 147 QVKID-----TGMSRIGLQEEEVKPFLEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 201 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + QI +I + ++ + + K + Sbjct: 202 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNAFQNMVRVGIGVYGMYPSKEVDHSVVS 261 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355 >gi|228952487|ref|ZP_04114567.1| Alanine racemase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229069638|ref|ZP_04202925.1| Alanine racemase [Bacillus cereus F65185] gi|229150330|ref|ZP_04278548.1| Alanine racemase [Bacillus cereus m1550] gi|229178496|ref|ZP_04305862.1| Alanine racemase [Bacillus cereus 172560W] gi|228605004|gb|EEK62459.1| Alanine racemase [Bacillus cereus 172560W] gi|228633139|gb|EEK89750.1| Alanine racemase [Bacillus cereus m1550] gi|228713478|gb|EEL65366.1| Alanine racemase [Bacillus cereus F65185] gi|228807182|gb|EEM53721.1| Alanine racemase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 408 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 ID + +N+ + +K++ A+K A + + Sbjct: 30 IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVDEA 89 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y ++ + + A +L KK+ + Sbjct: 90 IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 ++ S+ L + ++ E V G+ + E + Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGMFTHYSTADEIDKSYTNMQT 201 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + QI +I + ++ + + K + Sbjct: 202 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 261 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355 >gi|255940316|ref|XP_002560927.1| Pc16g05900 [Penicillium chrysogenum Wisconsin 54-1255] gi|211585550|emb|CAP93260.1| Pc16g05900 [Penicillium chrysogenum Wisconsin 54-1255] Length = 415 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 17/55 (30%), Gaps = 2/55 (3%) Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334 PY V G+ CL GD G ++FED + F Sbjct: 286 WRLYKHQPYPYWVKGKVCLLGD--AAHPMMPDQSQGSCMAFEDAGALGLVFHKNF 338 >gi|314985124|gb|EFT29216.1| alanine racemase [Propionibacterium acnes HL005PA1] gi|314990744|gb|EFT34835.1| alanine racemase [Propionibacterium acnes HL005PA3] Length = 375 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 37/336 (11%), Positives = 85/336 (25%), Gaps = 25/336 (7%) Query: 3 KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTL-----NQYM 52 +P + +ID + NL + K+L A+K A A + + ++ Sbjct: 5 PSPSHAIIDLSAIAANLAVVRK--RAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWL 62 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 T + E++ ++DA +++ + L A Sbjct: 63 AVATVAEGQELVEAGITLP---ILNLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAV 119 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--IKNVNGLMFHNNCENK 170 +L + I + L +E E ++ E Sbjct: 120 RLGITAKIHIAVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFT 179 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 + M E + ++ G I D + + Sbjct: 180 RREIDTFMTAVSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADR 239 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290 + A+ + + + + I +S + + + Sbjct: 240 ADLHPALSWISHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSNKGHV 299 Query: 291 -------MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + GR C+ + + V +GD + Sbjct: 300 LIRGSVHPIVGRICMDQ-FMVDLGPDSNVTVGDEVV 334 >gi|254460291|ref|ZP_05073707.1| threonine aldolase [Rhodobacterales bacterium HTCC2083] gi|206676880|gb|EDZ41367.1| threonine aldolase [Rhodobacteraceae bacterium HTCC2083] Length = 386 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 27/229 (11%), Positives = 61/229 (26%), Gaps = 10/229 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59 I+TP ++D L N+ K+ G++ + K + + G Sbjct: 26 IQTPALVLDLDALERNIKKMGDYAKSHGMRHRVHGKMHKSVDVAKLQESLGGACGVCCQK 85 Query: 60 LYEVMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIF-NTVSQLNKFKDKAQKL 114 + E + + N A D + + + + A K Sbjct: 86 VSEAEVFARGGIKDVMVSNQVTDLAKIDRLARMPKFGARVLCCVDDPANVADLSAAAVKH 145 Query: 115 HKKIGLRINPSVSY--SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172 +I + + +++ + + + I+ G M H + Sbjct: 146 GTQIEALVEIDCGAGRCGVTTTEAVVEIAKMIDAAEGLKFAGIQAYQGAMQHMDSYADRS 205 Query: 173 LCFSAMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220 + +E +E +GGG + L+ Sbjct: 206 EKTGVAIGMVEDALAGLKAVGLECDIVGGGGTGSYYFESNSGAFNELQC 254 >gi|207721615|ref|YP_002252054.1| alanine racemase [Ralstonia solanacearum MolK2] gi|206586776|emb|CAQ17361.1| ipr001608 alanine racemase, n-terminal protein [Ralstonia solanacearum MolK2] Length = 376 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 42/179 (23%), Gaps = 11/179 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP LID ++ N+ GV+ +K + G T S+L Sbjct: 6 LNTPAALIDVARMTGNIARMQQRLDALGVRFRPHVKTTKCEPVVRAQLDAGAQGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V I+ ++V+ A Sbjct: 66 KEAEQFFAA-GIRDIVYAVGMAPTRLPQALALRRRGCDLKIVADSVACAQAI--AAFGSA 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + V P + + G++ H + Sbjct: 123 HGEAFEVWIEVDVDGHRSGIV--PDDDRLISVGRVLAEGGMRLGGVLAHAGSSYEYHAH 179 >gi|170692411|ref|ZP_02883574.1| alanine racemase domain protein [Burkholderia graminis C4D1M] gi|170142841|gb|EDT11006.1| alanine racemase domain protein [Burkholderia graminis C4D1M] Length = 380 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 46/171 (26%), Gaps = 11/171 (6%) Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLY 61 +TP ++D +K+ N+ GVK +K + + G T S+L Sbjct: 7 ETPAAIVDVRKMEKNIAAMQERMNALGVKFRPHVKTSKCVEVAQAQIAAGARGITVSTLK 66 Query: 62 EVMLGHEKFGGETHAYNVAYKD-----CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116 E G Y V+ I+ + S + + Sbjct: 67 EAE-SFFAAGIVDILYAVSIVPSKLPRVMALRKRGCDLKIVVDNASAALAIVEFCKTAG- 124 Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 L + V + L + + V G++ H Sbjct: 125 -ESLEVWIEVDTDGHRSGLKPEEDALLEIG--RILHAGAIKVGGVLTHAGS 172 >gi|187736490|ref|YP_001878602.1| alanine racemase [Akkermansia muciniphila ATCC BAA-835] gi|187426542|gb|ACD05821.1| alanine racemase [Akkermansia muciniphila ATCC BAA-835] Length = 368 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 85/302 (28%), Gaps = 23/302 (7%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYM-DGTTSSSLYEV 63 ID + +NL+ K + +K A + TL+ +++ E Sbjct: 13 IDLGAIRHNLNVVKQAAKGEYYMPV--VKAGAYGHGLEQVCRTLDSEGIAFFGVANVGEA 70 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E + ++ N +T+ + + A+ K + + ++ Sbjct: 71 RRISQAGCRTRPYILGPAFPEEREEIVLNGWRSFISTMEEAAHYNSLARLYGKTLPIHLS 130 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + +L E E + ++ GL H C ++ + E Sbjct: 131 VD-----TGMGRGGFLPDQLEELLSRLGELDSLHLEGLGAHLPCADEDREITLRQISRFE 185 Query: 184 KEFGHFITQ--IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241 + + +++ L D + P + C + Y P A + Sbjct: 186 QMAARIREKLPLKYCHLANSAASLDYEIPSNNMC---RPGLVLYGFSPIPSPWAAQLKPA 242 Query: 242 T--TLNTTVLDISENIKNLVIVDSSVEAHVPDY----LLYQESATIYPNTGPYTAMVCGR 295 TV+ + + V H + Y + MV G Sbjct: 243 MALFSRLTVVRTLPEGHGISYGGTFVTDHPTRVATVGIGYADGYLRSLAHKGARVMVDGV 302 Query: 296 SC 297 SC Sbjct: 303 SC 304 >gi|228939234|ref|ZP_04101827.1| Alanine racemase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972113|ref|ZP_04132729.1| Alanine racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978725|ref|ZP_04139096.1| Alanine racemase [Bacillus thuringiensis Bt407] gi|228780986|gb|EEM29193.1| Alanine racemase [Bacillus thuringiensis Bt407] gi|228787597|gb|EEM35560.1| Alanine racemase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820429|gb|EEM66461.1| Alanine racemase [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 408 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 ID + +N+ + +K++ A+K A + + Sbjct: 30 IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y ++ + + A +L KK+ + Sbjct: 90 IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 ++ S+ L + ++ E V G+ + E + Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYIEVVGIFTHYSTADEIDKSYTNMQT 201 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + QI +I + ++ + + K + Sbjct: 202 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 261 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355 >gi|209546068|ref|YP_002277958.1| alanine racemase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538925|gb|ACI58858.1| alanine racemase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 366 Score = 38.2 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 24/203 (11%), Positives = 46/203 (22%), Gaps = 9/203 (4%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCF--AAWGMFDTLN-QYMDGTTSS 58 + TP +ID+ +L N+ G+ +K A + Sbjct: 19 LSTPRPVIDEDRLAANIARVQSYMDEHGLNFRPHIKTHKIPALAVAQIAAGAKGINCQKV 78 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN-KFKDKAQKLHKK 117 S EV FG +N+ + N V+ A Sbjct: 79 SEAEV-FAEAGFGDILITFNIIGQQKLERLARLNEKIPALKVVADSETTIDGLAAHFSGH 137 Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177 L + + + ++ + + +S A Sbjct: 138 KPLTVLVECD--TGGGRCGVQRPEEAASLARRIAAAD--GLTFGGIVTYPKPQSAASVEA 193 Query: 178 MLKNIEKEFGHFITQIEWISLGG 200 + +S GG Sbjct: 194 FITETLDCLKSDGIDCPIVSNGG 216 >gi|330819823|ref|YP_004348685.1| hypothetical protein bgla_2g07000 [Burkholderia gladioli BSR3] gi|327371818|gb|AEA63173.1| hypothetical protein bgla_2g07000 [Burkholderia gladioli BSR3] Length = 376 Score = 38.2 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 21/181 (11%), Positives = 48/181 (26%), Gaps = 11/181 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ N++ GV+ +K + L G T S+L Sbjct: 6 LPTPSALIDVPRMQRNIERMQQRLDALGVRFRPHVKTTKCEPVVRAQLAAGARGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + G + Y V ++ ++ +++ A Sbjct: 66 KEAEQFFAQ-GIDDIVYAVGMVPGKLPQALALIRRGCDLKLVADSLVSAKAI--AAFGRE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 + + + + + + + G++ H Sbjct: 123 QGLSFEVWVEIDVDGHRSGLAPADERL--IEVGRALVEGGMKLGGVLAHAGSSYDYHRHE 180 Query: 176 S 176 Sbjct: 181 D 181 >gi|218234797|ref|YP_002366787.1| alanine racemase [Bacillus cereus B4264] gi|296502685|ref|YP_003664385.1| alanine racemase [Bacillus thuringiensis BMB171] gi|218162754|gb|ACK62746.1| alanine racemase [Bacillus cereus B4264] gi|296323737|gb|ADH06665.1| alanine racemase [Bacillus thuringiensis BMB171] Length = 391 Score = 38.2 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 ID + +N+ + +K++ A+K A + + Sbjct: 13 IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVDEA 72 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y ++ + + A +L KK+ + Sbjct: 73 IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 ++ S+ L + ++ E V G+ + E + Sbjct: 130 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 184 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + QI +I + ++ + + K + Sbjct: 185 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 244 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 304 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 305 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338 >gi|227541786|ref|ZP_03971835.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182492|gb|EEI63464.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51866] Length = 368 Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 7/65 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYM-DGTTSSSLYEV 63 ID + +N NA V + +K A + L + G +++ E Sbjct: 8 IDLDAIASNAREVQKAAGNADVMAV--VKANAYNHGVDLVVPVLEKAGIAGFGVATIPEA 65 Query: 64 MLGHE 68 E Sbjct: 66 RQVRE 70 >gi|227487051|ref|ZP_03917367.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51867] gi|227093125|gb|EEI28437.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51867] Length = 377 Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 7/65 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYM-DGTTSSSLYEV 63 ID + +N NA V + +K A + L + G +++ E Sbjct: 17 IDLDAIASNAREVQKAAGNADVMAV--VKANAYNHGVDLVVPVLEKAGIAGFGVATIPEA 74 Query: 64 MLGHE 68 E Sbjct: 75 RQVRE 79 >gi|206972055|ref|ZP_03233003.1| alanine racemase [Bacillus cereus AH1134] gi|206732978|gb|EDZ50152.1| alanine racemase [Bacillus cereus AH1134] Length = 391 Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 ID + +N+ + +K++ A+K A + + Sbjct: 13 IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVDEA 72 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y ++ + + A +L KK+ + Sbjct: 73 IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 ++ S+ L + ++ E V G+ + E + Sbjct: 130 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 184 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + QI +I + ++ + + K + Sbjct: 185 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 244 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 304 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 305 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338 >gi|325290796|ref|YP_004266977.1| alanine racemase [Syntrophobotulus glycolicus DSM 8271] gi|324966197|gb|ADY56976.1| alanine racemase [Syntrophobotulus glycolicus DSM 8271] Length = 376 Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 37/125 (29%), Gaps = 8/125 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMD-GTTSSSLYE 62 ID L N +++ +K A A + TL + + L E Sbjct: 10 CIDLGALRRNYRRICR---QTNSEVMAIVKANAYGHGALEIVRTLKEEGVRRFGVAILEE 66 Query: 63 VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + EKF T + + +++ + Q F +A+K L I Sbjct: 67 ALQIREKFPEVTVMLIGPTMPDQAERIVAEGIIPEVFRLEQAEAFSLEAEKKGIPAILHI 126 Query: 123 NPSVS 127 Sbjct: 127 KVDTG 131 >gi|194014407|ref|ZP_03053024.1| putative alanine racemase [Bacillus pumilus ATCC 7061] gi|194013433|gb|EDW22998.1| putative alanine racemase [Bacillus pumilus ATCC 7061] Length = 369 Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 54/195 (27%), Gaps = 12/195 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP LIDKQ ++ NL VKL K + + G T + + Sbjct: 7 LDTPALLIDKQVMMENLAAMQQYADRQQVKLRPHTKTHKTPSLAKVQEEMGASGLTVAKV 66 Query: 61 YEVMLGHEK-----FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + F S + + V +++ +D + Sbjct: 67 GEAEVMAAHGLTDIFIANQIV-GETKLKRIRKLAESIHISFGIDCVEHVHQIEDVFRGAE 125 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 KK + I V S + + E ++ G+ F ++ Sbjct: 126 KKAEVLIEIEVGEE----RSGVIEESDFRQILQAIKTCEFVHLKGI-FSHDGHTYKAESK 180 Query: 176 SAMLKNIEKEFGHFI 190 + E + Sbjct: 181 AHCQTLYEDAVNRTL 195 >gi|261367671|ref|ZP_05980554.1| alanine racemase [Subdoligranulum variabile DSM 15176] gi|282570464|gb|EFB75999.1| alanine racemase [Subdoligranulum variabile DSM 15176] Length = 395 Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 36/342 (10%), Positives = 71/342 (20%), Gaps = 31/342 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSS-LYEV 63 ID L +N + +K A + L + + S L E Sbjct: 14 IDLDALRHNFAFIKRTIGGPVCAV---VKADAYGHGDIVVARVLQEEGAAAFAVSCLAEA 70 Query: 64 MLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 Y + + ++ A + K+ L Sbjct: 71 KRLRRHGITVPVLILGYADPSEASALAQEDIATACFSTE-YAKALSAAAVAAGVQVKVHL 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN-----NCENKSFLCF 175 +I+ + F + R E I + F Sbjct: 130 KIDTGMGRIGFAAQSDWQAVVRELEALCSLPGLSICGI-FQHFAVADSLEPDAQTYTDNQ 188 Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 + + + + + D + P Sbjct: 189 YTLFRKVVDQLQADGYDTGTVHCANSAAQLRHPEWRNDMTRAGIILYGLDPSDELHFPVL 248 Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP------------DYLLYQESATIYP 283 V + T V D+ + +A + +L Sbjct: 249 KPVMTLKCIVTFVKDLLPGQSVSYGRTFTAKAPMRVATACVGYADGYPRMLSGSQGQGLM 308 Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325 A V GR C+ + V++GD ++ Sbjct: 309 MVNGRPAPVLGRVCMDQ-TLLDVTNIPGVRMGDEVTVFGPGA 349 >gi|30262102|ref|NP_844479.1| alanine racemase [Bacillus anthracis str. Ames] gi|47527372|ref|YP_018721.1| alanine racemase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184943|ref|YP_028195.1| alanine racemase [Bacillus anthracis str. Sterne] gi|165870205|ref|ZP_02214861.1| alanine racemase [Bacillus anthracis str. A0488] gi|167633047|ref|ZP_02391373.1| alanine racemase [Bacillus anthracis str. A0442] gi|167638340|ref|ZP_02396617.1| alanine racemase [Bacillus anthracis str. A0193] gi|170686461|ref|ZP_02877682.1| alanine racemase [Bacillus anthracis str. A0465] gi|170706003|ref|ZP_02896465.1| alanine racemase [Bacillus anthracis str. A0389] gi|177650850|ref|ZP_02933747.1| alanine racemase [Bacillus anthracis str. A0174] gi|190568000|ref|ZP_03020911.1| alanine racemase [Bacillus anthracis Tsiankovskii-I] gi|227815101|ref|YP_002815110.1| alanine racemase [Bacillus anthracis str. CDC 684] gi|229604370|ref|YP_002866463.1| alanine racemase [Bacillus anthracis str. A0248] gi|254684669|ref|ZP_05148529.1| alanine racemase [Bacillus anthracis str. CNEVA-9066] gi|254737113|ref|ZP_05194817.1| alanine racemase [Bacillus anthracis str. Western North America USA6153] gi|254743702|ref|ZP_05201387.1| alanine racemase [Bacillus anthracis str. Kruger B] gi|30256728|gb|AAP25965.1| alanine racemase [Bacillus anthracis str. Ames] gi|47502520|gb|AAT31196.1| alanine racemase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178870|gb|AAT54246.1| alanine racemase [Bacillus anthracis str. Sterne] gi|164714093|gb|EDR19614.1| alanine racemase [Bacillus anthracis str. A0488] gi|167513641|gb|EDR89010.1| alanine racemase [Bacillus anthracis str. A0193] gi|167531859|gb|EDR94524.1| alanine racemase [Bacillus anthracis str. A0442] gi|170129005|gb|EDS97870.1| alanine racemase [Bacillus anthracis str. A0389] gi|170669537|gb|EDT20279.1| alanine racemase [Bacillus anthracis str. A0465] gi|172083311|gb|EDT68372.1| alanine racemase [Bacillus anthracis str. A0174] gi|190561055|gb|EDV15029.1| alanine racemase [Bacillus anthracis Tsiankovskii-I] gi|227006748|gb|ACP16491.1| alanine racemase [Bacillus anthracis str. CDC 684] gi|229268778|gb|ACQ50415.1| alanine racemase [Bacillus anthracis str. A0248] Length = 391 Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 30/337 (8%), Positives = 84/337 (24%), Gaps = 36/337 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM------DGTTSS 58 +D + +N+ + + ++ A+K A + + Sbjct: 13 VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD-- 70 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ Y + + + L + A +L KK Sbjct: 71 EAIELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKA 127 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLC 174 +++ ++ + ++ E V G+ + E Sbjct: 128 QIQVKID-----TGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNM 182 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIY 230 +++ + I +I + ++ + + K Sbjct: 183 QTSLFEKAVNTAKELGIHIPYIHSSNSAGSMEPSNTFQNMVRVGIGIYGMYPSKEVNHSV 242 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287 + A+ + + + + ++ E + + + Sbjct: 243 VSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHA 302 Query: 288 ----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 303 LINGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338 >gi|134292751|ref|YP_001116487.1| alanine racemase domain-containing protein [Burkholderia vietnamiensis G4] gi|134135908|gb|ABO57022.1| alanine racemase domain protein [Burkholderia vietnamiensis G4] Length = 376 Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 53/214 (24%), Gaps = 20/214 (9%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60 + TP LID ++ N+ GV +K + D + G T S+L Sbjct: 6 VTTPAALIDVDRMHANIARLHAHLDAFGVAFRPHVKTTKCQQVVDAQIAAGARGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V I+ +++ A Sbjct: 66 KEAEQFFAS-GVRDIVYAVGMIPARLPQALALRRRGCDLKIVADSLHTAQAI--AAFGRE 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF--- 172 + + RP L + + + G++ H + Sbjct: 123 HGERFEVWIEIDVDGHR--SGIRPDDDLLIDVGRTLAAGGMTLGGVLAHAGSSYEYDTHD 180 Query: 173 ------LCFSAMLKNIEKEFGHFITQIEWISLGG 200 A + + + +S+G Sbjct: 181 ALVAIAEQERARTVHAAQRLRAAGLPCDVVSIGS 214 >gi|330960246|gb|EGH60506.1| hypothetical protein PMA4326_16961 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 367 Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 36/130 (27%), Gaps = 7/130 (5%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLYEVMLG 66 L+D ++ N+ GV+L +K + + + G T S+L E Sbjct: 3 LLDVPRMQRNIRRMQQRMNELGVRLRPHVKTSKSLPVIQAQIAAGATGVTVSTLKEAEHC 62 Query: 67 HEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRI 122 + + A D + C I+ ++V A + Sbjct: 63 FAEGIEDVFYAVAIAPGKLDQAFRLRRNGCRLSILTDSVVAAQAI--VAFGQQHDERFEV 120 Query: 123 NPSVSYSKFI 132 + Sbjct: 121 WIEIDCDGHR 130 >gi|313833423|gb|EFS71137.1| alanine racemase [Propionibacterium acnes HL056PA1] Length = 375 Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 37/336 (11%), Positives = 86/336 (25%), Gaps = 25/336 (7%) Query: 3 KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTL-----NQYM 52 +P + +ID + NL + K+L A+K A A + + ++ Sbjct: 5 PSPSHAIIDLSAIAANLAVVRK--RAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWL 62 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 T + E++ ++DA +++ + L A Sbjct: 63 AVATVAEGQELVEAGITLP---ILKLPPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAV 119 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--IKNVNGLMFHNNCENK 170 +L + I + L +E E ++ E+ Sbjct: 120 RLGITAKIHIAVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEST 179 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 + M E + ++ G I D + + Sbjct: 180 RREIDTFMTAVSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADR 239 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290 + A+ + + + + I +S + + + Sbjct: 240 ADLHPALSWISHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSNKGHV 299 Query: 291 -------MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + GR C+ + + V +GD + Sbjct: 300 LIRGSVHPIVGRICMDQ-FMVDLGPDSNVTVGDEVV 334 >gi|257093754|ref|YP_003167395.1| alanine racemase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046278|gb|ACV35466.1| alanine racemase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 356 Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 10/96 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYMDGTTSSSLYE---- 62 LID KL +N+ I ++AGV+ + K C + + D L L E Sbjct: 4 LIDLAKLDHNVAVIQEICRHAGVQAVWVTKGCHSHPAVVDLLASRGAAV----LGEVYAD 59 Query: 63 -VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII 97 + + F GE A+ ++ Sbjct: 60 NLRRIRDGFAGELLMIQPPSGHQLDAALACADTLLV 95 >gi|30020200|ref|NP_831831.1| alanine racemase [Bacillus cereus ATCC 14579] gi|228962874|ref|ZP_04124117.1| Alanine racemase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229079274|ref|ZP_04211819.1| Alanine racemase [Bacillus cereus Rock4-2] gi|229109560|ref|ZP_04239150.1| Alanine racemase [Bacillus cereus Rock1-15] gi|229127502|ref|ZP_04256494.1| Alanine racemase [Bacillus cereus BDRD-Cer4] gi|229144707|ref|ZP_04273107.1| Alanine racemase [Bacillus cereus BDRD-ST24] gi|29895750|gb|AAP09032.1| Alanine racemase [Bacillus cereus ATCC 14579] gi|228638759|gb|EEK95189.1| Alanine racemase [Bacillus cereus BDRD-ST24] gi|228655959|gb|EEL11805.1| Alanine racemase [Bacillus cereus BDRD-Cer4] gi|228673896|gb|EEL29150.1| Alanine racemase [Bacillus cereus Rock1-15] gi|228704024|gb|EEL56465.1| Alanine racemase [Bacillus cereus Rock4-2] gi|228796804|gb|EEM44171.1| Alanine racemase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 408 Score = 38.2 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 ID + +N+ + +K++ A+K A + + Sbjct: 30 IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVDEA 89 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y ++ + + A +L KK+ + Sbjct: 90 IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 ++ S+ L + ++ E V G+ + E + Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 201 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + QI +I + ++ + + K + Sbjct: 202 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 261 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355 >gi|303327206|ref|ZP_07357648.1| putative alanine racemase, N- domain protein [Desulfovibrio sp. 3_1_syn3] gi|302863194|gb|EFL86126.1| putative alanine racemase, N- domain protein [Desulfovibrio sp. 3_1_syn3] Length = 193 Score = 38.2 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 13/173 (7%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT--LNQYMDGTTSSS 59 + TP L+D+ +L N+ + GV L K + + ++ T S+ Sbjct: 1 MPTPSLLLDEARLRRNIARLDERLRALGVALRPHCKTCKSMDVARLCMVSPQGP-ITVST 59 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQKL 114 L E + G Y V ++ L+ ++ ++ + A++ Sbjct: 60 LAEAEY-FAEHGVTDICYAVGVTPGKLARALALRQRGVRLSLLLDSAESARQLAAFARER 118 Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 L + RP + + +N+ G++ H Sbjct: 119 KHIFDLLLEIDCDGH----RSGLRPDDPELTETAALLAGAGQNLLGVLTHAGS 167 >gi|33599435|ref|NP_886995.1| putative metal-activated pyridoxal enzyme [Bordetella bronchiseptica RB50] gi|33567031|emb|CAE30944.1| putative metal-activated pyridoxal enzyme [Bordetella bronchiseptica RB50] Length = 381 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 42/172 (24%), Gaps = 11/172 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60 + TP ++D ++ +N+ GV L +K + L G T S+L Sbjct: 12 LDTPAAIVDVARMQHNIARMQDRMNGLGVSLRPHVKTSKCTPVALAQLAAGARGVTVSTL 71 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E + Y V + II + D Sbjct: 72 KEAEQFFAAGIAD-ILYAVGMAEHRLPAALALRRRGCDLKIITDNAESARTIAD--FGRA 128 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167 + + +P + + G+M H Sbjct: 129 HDEVFEVWIEIDTDGHR--SGIKPEEAALLAVGAALHEGGMRLGGVMTHAGS 178 >gi|226227945|ref|YP_002762051.1| hypothetical protein GAU_2539 [Gemmatimonas aurantiaca T-27] gi|226091136|dbj|BAH39581.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 397 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 ++TP ++D +L +NLD G+KL +K + + + G + ++L Sbjct: 27 LETPVPVVDLDRLAHNLDRMAAYVTLHGLKLRPHVKTHKSPRIAAEQLRLGAVGLSCATL 86 Query: 61 YEVM 64 E Sbjct: 87 REAE 90 >gi|294508466|ref|YP_003572524.1| Alanine racemase [Salinibacter ruber M8] gi|294344794|emb|CBH25572.1| Alanine racemase [Salinibacter ruber M8] Length = 388 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 2/88 (2%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP LI++ +L NL V L +K + + + Q G T +++ Sbjct: 6 LSTPALLIEQARLQANLAAMQATANANDVTLRPHVKTHKSVAIAEQQQQRGATGLTVATV 65 Query: 61 YEVML-GHEKFGGETHAYNVAYKDCEID 87 +E F AY V + Sbjct: 66 HEAEAFVAAGFDDVRVAYPVVGRPKHER 93 >gi|269218932|ref|ZP_06162786.1| alanine racemase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212043|gb|EEZ78383.1| alanine racemase [Actinomyces sp. oral taxon 848 str. F0332] Length = 382 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 24/217 (11%), Positives = 55/217 (25%), Gaps = 14/217 (6%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYMDGTTSSSLYEVM 64 ID + +NL + A V + +K A + L D ++ L E + Sbjct: 20 IDLSAIRSNLSSVREAAGEAAVLAV--VKADAYGHGRAEVARALAPAADYLGAAQLGEAL 77 Query: 65 LGHEKFGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E+ G + A L + +++ A++ + + Sbjct: 78 ALREEVGPGPRILTWIFAPGAPLAQALRADVELSAGAFWAIDEIARAARETGTTAKVHLK 137 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN---NCENKSFLCFSAMLK 180 ++ + + + V E+ + + Sbjct: 138 VDTGMARGGFNLADVAEASRRLRALQADG-LFSVVGLWSHLARADEPESGATERQIERFE 196 Query: 181 NIEKEFGHFITQIEWISL---GGGIHFTDKDYPVKDF 214 + E + L GG + Y + Sbjct: 197 QARAAARSEGIEPEILHLAASGGALWHPAARYDMVRP 233 >gi|196036671|ref|ZP_03104064.1| alanine racemase [Bacillus cereus W] gi|195990740|gb|EDX54715.1| alanine racemase [Bacillus cereus W] Length = 391 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 30/335 (8%), Positives = 84/335 (25%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 +D + +N+ + + ++ A+K A + + Sbjct: 13 VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 72 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y + + + L + A +L KK + Sbjct: 73 IELREAGINVPILILGYTSV---AATEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQI 129 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 ++ ++ + ++ E V G+ + E + Sbjct: 130 QVKID-----TGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQT 184 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + I +I + ++ + + K + Sbjct: 185 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVNHSVVS 244 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALI 304 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 305 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338 >gi|119386626|ref|YP_917681.1| alanine racemase domain-containing protein [Paracoccus denitrificans PD1222] gi|119377221|gb|ABL71985.1| D-3-hydroxyaspartate aldolase [Paracoccus denitrificans PD1222] Length = 387 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 7/134 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59 I+TP ++D L N+ K G++ K + + G Sbjct: 27 IQTPCLILDLDALERNIRKMGDYAKAHGMRHRSHGKMHKSVDVQKLQESLGGSVGVCCQK 86 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQKL 114 + E + N + +ID + T+ + V + AQK Sbjct: 87 VSEAEAFARGGIKDVLVTNEVREPAKIDRLARLPKTGATVTVCVDDVQNIADLSAAAQKH 146 Query: 115 HKKIGLRINPSVSY 128 ++G+ + Sbjct: 147 GTELGIFVEIDCGA 160 >gi|326692928|ref|ZP_08229933.1| alanine racemase [Leuconostoc argentinum KCTC 3773] Length = 370 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 56/212 (26%), Gaps = 11/212 (5%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA-WGMFDT----LNQYMDGTTSSSLYEV 63 I ++ L NN+ K+ LA+K A G+ T + + G + + E Sbjct: 13 ISQKALKNNVAVVKQTSGAD--KIFLAVKSNAYGLGLIPTSKAAIAGGVYGLAVAIIDEA 70 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + + + + + + L+ K+ A L + L ++ Sbjct: 71 LALRHERLTAPILILGISPAQYAELMAVQHIMAMVVS---LDWLKEAATYLSGEQRLHVS 127 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 V + +R V ++ + F L Sbjct: 128 LGVDTGMGRIGFRDRAALAEAIAYVQAHHDLFDYVGLATHFAESDSANTDYFEMQLARW- 186 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215 E + + E+ + V Sbjct: 187 HELTDGLPEPEYYHVANSGAAMYHADEVPHDV 218 >gi|254751429|ref|ZP_05203466.1| alanine racemase [Bacillus anthracis str. Vollum] gi|254758301|ref|ZP_05210328.1| alanine racemase [Bacillus anthracis str. Australia 94] Length = 408 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 30/337 (8%), Positives = 84/337 (24%), Gaps = 36/337 (10%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM------DGTTSS 58 +D + +N+ + + ++ A+K A + + Sbjct: 30 VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD-- 87 Query: 59 SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118 E+ Y + + + L + A +L KK Sbjct: 88 EAIELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKA 144 Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLC 174 +++ ++ + ++ E V G+ + E Sbjct: 145 QIQVKID-----TGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNM 199 Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIY 230 +++ + I +I + ++ + + K Sbjct: 200 QTSLFEKAVNTAKELGIHIPYIHSSNSAGSMEPSNTFQNMVRVGIGIYGMYPSKEVNHSV 259 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287 + A+ + + + + ++ E + + + Sbjct: 260 VSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHA 319 Query: 288 ----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 320 LINGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355 >gi|23495371|dbj|BAC20179.1| D-b-hydroxy-aspartate aldolase [Paracoccus denitrificans] Length = 387 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 7/134 (5%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59 I+TP ++D L N+ K G++ K + + G Sbjct: 27 IQTPCLILDLDALERNIRKMGDYAKAHGMRHRSHGKMHKSVDVQKLQESLGGSVGVCCQK 86 Query: 60 LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQKL 114 + E + N + +ID + T+ + V + AQK Sbjct: 87 VSEAEAFARGGIKDVLVTNEVREPAKIDRLARLPKTGATVTVCVDDVQNIADLSAAAQKH 146 Query: 115 HKKIGLRINPSVSY 128 ++G+ + Sbjct: 147 GTELGIFVEIDCGA 160 >gi|259047269|ref|ZP_05737670.1| alanine racemase [Granulicatella adiacens ATCC 49175] gi|259036045|gb|EEW37300.1| alanine racemase [Granulicatella adiacens ATCC 49175] Length = 371 Score = 37.8 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 8/73 (10%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLA-LKCFA----AWGMFDTLNQYMD-GTTSSSLY 61 ++D + N+ + K + A +K A + + G +++ Sbjct: 12 VVDLSIIKQNISKLKSKLNPS--KQVYAVVKANAYGHGMIPVAKAALEAGVQGFCVANVD 69 Query: 62 EVMLGHEKFGGET 74 E + E E Sbjct: 70 EALALREAGIMEP 82 >gi|227544692|ref|ZP_03974741.1| alanine racemase [Lactobacillus reuteri CF48-3A] gi|300909066|ref|ZP_07126529.1| alanine racemase [Lactobacillus reuteri SD2112] gi|227185338|gb|EEI65409.1| alanine racemase [Lactobacillus reuteri CF48-3A] gi|300894473|gb|EFK87831.1| alanine racemase [Lactobacillus reuteri SD2112] Length = 375 Score = 37.8 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 60/192 (31%), Gaps = 11/192 (5%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDT-LNQYMDGTTSSSLYE 62 ++D L +N+ + ++L +K A + T + G + L E Sbjct: 12 IVDLDALRHNIQEQRKVLPE-NSRILAVVKANAYGNGLIPVAQTAMTSGASGLCVAILDE 70 Query: 63 VM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 + L T + + + A + ++ ++ L ++ AQ K L+ Sbjct: 71 ALELWDNGIEAMTLVLGITPVEDALIAAQAG-VSLTVGSLDWLEQYHQLAQVAKPKKPLK 129 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 ++ + + + + ++S G+ H + + Sbjct: 130 VHLGIDSGMGRIGFTEVATFK---QAVKLLDSPEFEFEGMFTHFATADSPDENYFNQQVQ 186 Query: 182 IEKEFGHFITQI 193 +F + ++ Sbjct: 187 RWHQFVASLDEL 198 >gi|261855604|ref|YP_003262887.1| alanine racemase [Halothiobacillus neapolitanus c2] gi|261836073|gb|ACX95840.1| alanine racemase [Halothiobacillus neapolitanus c2] Length = 378 Score = 37.8 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 9/65 (13%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYE-- 62 ID L +N A + K G KLL A+K A + L +DG ++L E Sbjct: 25 IDLAALRHNAAVARQVAK--GRKLLAAVKADAYGHGMATVARALRDRVDGFMVATLGEGE 82 Query: 63 -VMLG 66 + L Sbjct: 83 ALRLA 87 >gi|228920796|ref|ZP_04084136.1| Alanine racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229190195|ref|ZP_04317198.1| Alanine racemase [Bacillus cereus ATCC 10876] gi|228593312|gb|EEK51128.1| Alanine racemase [Bacillus cereus ATCC 10876] gi|228838907|gb|EEM84208.1| Alanine racemase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 408 Score = 37.8 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60 ID + +N+ + +K++ A+K A + + Sbjct: 30 IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVDEA 89 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120 E+ Y ++ + + A +L KK+ + Sbjct: 90 IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146 Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176 ++ S+ L + ++ E V G+ + E + Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 201 Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232 ++ + QI +I + ++ + + K + Sbjct: 202 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 261 Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287 A+ + + + + ++ E + + + Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321 Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320 V GR C+ + + PV++GD + F Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355 >gi|255018554|ref|ZP_05290680.1| hypothetical protein LmonF_14096 [Listeria monocytogenes FSL F2-515] Length = 54 Score = 37.8 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 4/23 (17%), Positives = 7/23 (30%) Query: 3 KTPYYLIDKQKLLNNLDTALYIR 25 TP Y+ D + + Sbjct: 32 GTPLYVYDVALIRDRARGFKKTF 54 >gi|42526605|ref|NP_971703.1| alanine racemase [Treponema denticola ATCC 35405] gi|81831436|sp|Q73NQ7|ALR_TREDE RecName: Full=Alanine racemase gi|41816798|gb|AAS11584.1| alanine racemase [Treponema denticola ATCC 35405] Length = 379 Score = 37.8 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 24/201 (11%), Positives = 60/201 (29%), Gaps = 13/201 (6%) Query: 8 LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA--AWGM---FDTLNQYMDGTTSSSLYE 62 +I L N+ VK+ L +K A + + + +S+ E Sbjct: 7 IIHLDNLQYNIKEIKKRLNK-NVKICLPVKADAYGHGAVRVAVAAIRAGVSYLAVASIQE 65 Query: 63 V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121 L + ++ + + + + + ++ + + A+KL+KK + Sbjct: 66 AVELREAGIVAPIISLSLPVLEEIPELLKYDIEPLVIDEEFIND-LNRFAKKLNKKAWVH 124 Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181 + + + +E + G+ H + + K Sbjct: 125 LKID-----TGMRRIGCSPMEAVKLAVQIDRAENLELKGVCTHFAVSDSTDEKNIKFTKK 179 Query: 182 IEKEFGHFITQIEWISLGGGI 202 F I +I+ + G+ Sbjct: 180 QISVFKDSIKEIKKAGINPGL 200 >gi|327457519|gb|EGF04174.1| alanine racemase [Propionibacterium acnes HL092PA1] Length = 375 Score = 37.8 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 89/336 (26%), Gaps = 25/336 (7%) Query: 3 KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTL-----NQYM 52 +P + +ID + + NL + K+L A+K A A + + ++ Sbjct: 5 PSPSHAIIDLRAIAANLAVVRK--RAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWL 62 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 T + E L + A A+ S + + L A Sbjct: 63 AVATVAEGQE--LVEAGITLPILKLSPADPWDMDAAITSGMRLTVVD-FDTLEAVSKAAV 119 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--IKNVNGLMFHNNCENK 170 +L + I + L + +++E E ++ E+ Sbjct: 120 RLGITARIHIAVDSGMGRIGLRPEHLAQLTAAADRTERVEVEGVFTHLPMSDVPEGEEST 179 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 + M + + + ++ G I D + + Sbjct: 180 RHEIDAFMTAVTQTQTDRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPDPHANR 239 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290 + A+ + ++ + I +S + + + Sbjct: 240 ADLHPALSWISHVTFVKTINPGDAIGYGRTWTASETTKIATVPVGYADGLSRGLSNKGHV 299 Query: 291 -------MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + GR C+ + + V +GD + Sbjct: 300 LIGGSVHPIVGRICMDQ-FMVDLGPDSSVTVGDEVV 334 >gi|182414552|ref|YP_001819618.1| alanine racemase [Opitutus terrae PB90-1] gi|177841766|gb|ACB76018.1| alanine racemase [Opitutus terrae PB90-1] Length = 382 Score = 37.8 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 23/273 (8%), Positives = 66/273 (24%), Gaps = 13/273 (4%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-----DTLNQYMDGTTSSSLYEV 63 ID L NL + + +K A ++ D ++L E Sbjct: 16 IDLAALERNLRLIRASLPAHMRYVAV-VKADAYGHGLPQTAARLMHAGADLFAVATLAEA 74 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 E G E + T +++ ++++F+ + + I + + Sbjct: 75 ATVRELGPGWPVLLLSPLLPEEDRYLAEYDLTATVSSIEEVDRFEAAGRVAGRVISVHLK 134 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 + + + + + G+ H ++ + + Sbjct: 135 IDTGMGRLGVWHEQTASV-----YEHLARAPHLRLAGVFTHFAAPEEAAFTSEQRRRFLA 189 Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP--GEAIVTNT 241 ++ I + + ++ ++ + + E Sbjct: 190 ALAACQGIPLDSIFVHADNSAGIETMSSATPFNAVRIGLLQFGILPHPNSLLSEVHTEPV 249 Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274 + T V + I + Sbjct: 250 FSFLTRVGLVKSLPAGYTISYGRTYTLGRPTRI 282 >gi|315099423|gb|EFT71399.1| alanine racemase [Propionibacterium acnes HL059PA2] Length = 375 Score = 37.8 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 37/336 (11%), Positives = 86/336 (25%), Gaps = 25/336 (7%) Query: 3 KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTL-----NQYM 52 +P + +ID + NL + K+L A+K A A + + ++ Sbjct: 5 PSPSHAIIDLSAIAANLAVVRK--RAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWL 62 Query: 53 DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112 T + E++ ++DA +++ + L A Sbjct: 63 AVATVAEGQELVEAGITLP---ILKLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAV 119 Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--IKNVNGLMFHNNCENK 170 +L + I + L +E E ++ E+ Sbjct: 120 RLGITAKIHIAVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEST 179 Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230 + M E + ++ G I D + + Sbjct: 180 RREIDTFMTAVSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADR 239 Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290 + A+ + + + + I +S + + + Sbjct: 240 ADLHPALSWISHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSNKGHV 299 Query: 291 -------MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 + GR C+ + + V +GD + Sbjct: 300 LIRGSVHPIVGRICMDQ-FMVDLGPDSNVTVGDEVV 334 >gi|121592921|ref|YP_984817.1| alanine racemase domain-containing protein [Acidovorax sp. JS42] gi|120605001|gb|ABM40741.1| alanine racemase domain protein [Acidovorax sp. JS42] Length = 393 Score = 37.8 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 19/69 (27%), Gaps = 3/69 (4%) Query: 1 MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM---FDTLNQYMDGTTS 57 +I TP ++D + N+ V+ K + + + Sbjct: 22 LIDTPALVVDLDAMERNIQRMAEFAHKHQVRWRPHAKMHKSAEIALQLEWSGARGHCVQK 81 Query: 58 SSLYEVMLG 66 S E + Sbjct: 82 VSEAEALAA 90 >gi|300703088|ref|YP_003744690.1| hypothetical protein RCFBP_10743 [Ralstonia solanacearum CFBP2957] gi|299070751|emb|CBJ42046.1| conserved protein of unknown function, Alanine racemase domain protein [Ralstonia solanacearum CFBP2957] Length = 376 Score = 37.8 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 42/179 (23%), Gaps = 11/179 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP LID ++ N+ GV+ +K + G T S+L Sbjct: 6 LNTPAALIDVARMTGNIARMQQRLDALGVRFRPHVKTTKCEPVVRAQLDAGAQGITVSTL 65 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115 E G Y V I+ ++V+ A Sbjct: 66 KEAEQFFAA-GLRDIVYAVGMAPTRLPQALALRRRGCDLKIVADSVACAQAI--AAFGNT 122 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174 + V P + + G++ H + Sbjct: 123 HGEAFEVWIEVDVDGHRSGIV--PDDDRLIAVGRVLAEGGMRLGGVLAHAGSSYEYHAH 179 >gi|296875898|ref|ZP_06899959.1| alanine racemase [Streptococcus parasanguinis ATCC 15912] gi|296433139|gb|EFH18925.1| alanine racemase [Streptococcus parasanguinis ATCC 15912] Length = 370 Score = 37.8 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 22/184 (11%), Positives = 51/184 (27%), Gaps = 11/184 (5%) Query: 9 IDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFAA----WGMFDTLNQYMDGTTSSSLYEV 63 +D + N+ + +K A+ K A + L +DG S++ E Sbjct: 13 VDLDAIAFNVQQVSEHIPSQALK--YAVVKANAYGHGVVAVTQKLAPQVDGFCVSNMDEA 70 Query: 64 MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123 + E+ ++ + + + L + GL+++ Sbjct: 71 LEIREEGLQHPILILGVVPSETVNLAKEHDIRLTVAS---LAWLDQLLGEEADLSGLKVH 127 Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183 V + ++ E+ +EI+ + F E + E Sbjct: 128 IKVDSGMGRIGFRTIEDIKVAERLLLAAGAEIEGI-FTHFATADEADDRKFQAQYHFFKE 186 Query: 184 KEFG 187 Sbjct: 187 VLAA 190 >gi|241864906|gb|ACS68536.1| low-specificity threonine aldolase [uncultured bacterium FLS18] Length = 407 Score = 37.8 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 23/211 (10%), Positives = 63/211 (29%), Gaps = 13/211 (6%) Query: 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60 + TP LID ++ NL + V L K + G ++ + Sbjct: 48 LSTPALLIDLDRMDGNLRKMADHARGKNVGLRPHTKTHKCPIIAKMQIDLGAVGVCAAKV 107 Query: 61 YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQKLH 115 E + G + +I V++ ++ + ++ F + A+ Sbjct: 108 SEAEVMAAGGVGNVLITSPVVTSEKISRVVALAKKSSGIQMVVDNAKTIDDFNEAAKAAG 167 Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175 ++ + ++ + + +P L ++ + + H Sbjct: 168 IELRVILDLDTGTKRTGI-AVGKPALALAQQIDKCDALQFDGLQVYAGHLMHITGHAQRK 226 Query: 176 SAMLK------NIEKEFGHFITQIEWISL