RPSBLAST alignment of GI: 254780741 and protein with PDBid: 1f3t
>1f3t_A ODC, ornithine decarboxylase; beta-alpha-barrel, modified greek KEY beta-sheet, lyase; HET: PLP; 2.00A {Trypanosoma brucei} SCOP: b.49.2.3 c.1.6.1 PDB: 1qu4_A* 1szr_C* 2tod_A* 1njj_A* Length = 425
Score = 135 bits (342), Expect = 1e-32
Identities = 77/387 (19%), Positives = 135/387 (34%), Gaps = 37/387 (9%)
Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
P+++ D ++ +T + + V A+KC W + TL G +S E
Sbjct: 37 GDPFFVADLGDIVRKHET--WKKCLPRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTE 94
Query: 63 VMLGHE-KFGGETHAYNVAYK-DCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
+ E Y K I A S D + F+ V +L K K K+
Sbjct: 95 IQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKA--KMV 152
Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
LRI+ S ++ L+ ++ + +V G+ FH + F+ +
Sbjct: 153 LRISTDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAI 212
Query: 180 KNIEKEFGHFIT---QIEWISLGGGIHFT-DKDYPVKDFCQRLKEFSEKY-----SVQIY 230
+ F + + +GGG T D ++ + EK+ + I
Sbjct: 213 SDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIV 272
Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA-------TIY- 282
EPG V + TL V+ V + E++ ++ Y +Y
Sbjct: 273 AEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYD 332
Query: 283 -------------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
PN Y + V G +C D E ++ +++G+ + FED+ Y +
Sbjct: 333 HAVVRPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVV 392
Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIRE 356
+ FNG PTI +RE
Sbjct: 393 GTSSFNGFQSPTIYYVVSGLPDHVVRE 419