HHsearch alignment for GI: 254780742 and conserved domain: COG1091
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane].
Probab=98.03 E-value=4.6e-05 Score=52.96 Aligned_cols=82 Identities=23% Similarity=0.388 Sum_probs=62.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
T Consensus 1 M~--iLi~G~~GqLG~~L~~~l~--~~--~~v~a~~~--------------------------~~~Ditd~~~v~~~i~~ 48 (281)
T COG1091 1 MK--ILITGANGQLGTELRRALP--GE--FEVIATDR--------------------------AELDITDPDAVLEVIRE 48 (281)
T ss_pred CC--EEEECCCCHHHHHHHHHHC--CC--CEEEECCC--------------------------CCCCCCCHHHHHHHHHH
T ss_conf 95--8997698767999999717--78--43995157--------------------------65555685899999986
Q ss_pred CCCCEEEECCCCCC--------------C----HHHHHHHHHCCCCEEEECCC
Q ss_conf 39729997376100--------------3----27899998628868960366
Q gi|254780742|r 80 TNSQIIINVGSSFL--------------N----MSVLRACIDSNVAYIDTAIH 114 (419)
Q Consensus 80 ~~~dvVin~~~p~~--------------~----~~v~~a~i~~g~hyvD~s~~ 114 (419)
T Consensus 49 ~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTD 101 (281)
T COG1091 49 TRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTD 101 (281)
T ss_pred HCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
T ss_conf 19998998732036541338989977767799999999999719769996344