HHsearch alignment for GI: 254780742 and conserved domain: COG3268

>COG3268 Uncharacterized conserved protein [Function unknown].
Probab=100.00  E-value=3.5e-31  Score=229.49  Aligned_cols=355  Identities=14%  Similarity=0.090  Sum_probs=226.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf             9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r    1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK   79 (419)
Q Consensus         1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~   79 (419)
T Consensus         5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~---~aLAgRs~~kl~~l~~~LG~----------~~~~~p~~~p~~~~~~~~~   71 (382)
T COG3268           5 REYDIIIYGATGYAGGLVAEYLAREGLT---AALAGRSSAKLDALRASLGP----------EAAVFPLGVPAALEAMASR   71 (382)
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHCCCC---HHHCCCCHHHHHHHHHHCCC----------CCCCCCCCCHHHHHHHHHC
T ss_conf             6403899746552158999999974886---43216888999889985096----------6444677888999999742


Q ss_pred             CCCCEEEECCCCC--CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
Q ss_conf             3972999737610--03278999986288689603664200001442000035775108888518869953750111488
Q gi|254780742|r   80 TNSQIIINVGSSF--LNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVN  157 (419)
Q Consensus        80 ~~~dvVin~~~p~--~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~  157 (419)
T Consensus        72 ~--~VVlncvGPyt~~g~plv~aC~~~GTdY~DiTG---------Ei~~fe~~i~~yh~~A~~~Ga~Ii~~cGFDsIPsD  140 (382)
T COG3268          72 T--QVVLNCVGPYTRYGEPLVAACAAAGTDYADITG---------EIMFFENSIDLYHAQAADAGARIIPGCGFDSIPSD  140 (382)
T ss_pred             C--EEEEECCCCCCCCCCHHHHHHHHHCCCEEECCC---------CHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
T ss_conf             6--689961466120264799999971987241356---------17999999888777887559789666777767640


Q ss_pred             HHHHHHHHH-HCCCCCE---EEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCEEEEECCCCCCEE---EECC-C
Q ss_conf             999999997-4366638---976302478888666542568998862259829999995899546775268---9778-8
Q gi|254780742|r  158 AFARLAQDE-YFDKITD---IDIIDVNAGKHDKYFATNFDAEINLREFTGVVYSWQKNQWCVNKMFEISRT---YDLP-T  229 (419)
Q Consensus       158 lla~~~~~~-~~d~~~~---i~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~G~~~~~~~~~~~~~---~~fp-~  229 (419)
T Consensus       141 l~v~~l~~~~~~d~~~~~~~t~l~l~s~t~~g~S~GT---aat~~e~l~~~~~~~~~gr~~~~P~~~~~~r~~~iDf~~~  217 (382)
T COG3268         141 LGVYALLKQALPDGTEELIATHLALGSFTGSGISGGT---AATSVEGLATAGKDPEAGRLLRVPYALKKRRGAEIDFPSR  217 (382)
T ss_pred             HHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCCCCC---HHHHHHHHHHCCCCCCCCCEECCCCEECCCCCCCCCCCCC
T ss_conf             1899999864764444223321001312567746520---9989999875057814484543673231477777776667


Q ss_pred             CCCCEEEEECCCCHHHHHHCCCCC---EEEEECCCCHHHHHHHHHHH-HHHCCCCCCCHHHCCCEECHHHHHHHHCCCCC
Q ss_conf             776403640484234565348663---17882134887987776654-30001311001107934135899876423423
Q gi|254780742|r  230 VGQHKVYLSGHDEIHSLFKNIQGA---DIRFWMGFSDHYINVFTVLK-NIGLLSEQPIRTAENIEIAPLKIVKAVLPDPS  305 (419)
Q Consensus       230 ~g~~~~~~~~~~e~~tl~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~v~~~~~~~~~p~~~~~~~l~~~~  305 (419)
T Consensus       218 rg~~~a~~~~Wg~V~a~~~t~iv~rsn~l~~~~~~~pv~~~a~~~~~~~~~ll~~~~~------~~~~r~lv~r~~~k~g  291 (382)
T COG3268         218 RGRRLAPTLPWGFVAAAFNTTIVPRSNALEVWIYAAPVLALAGRGIGALLPLLGSAYV------RDLLRGLVLRVVPKPG  291 (382)
T ss_pred             CCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHH------HHHHHHHHHEECCCCC
T ss_conf             7410175457055556640675466661223311268999988320112134323777------5666766521056889


Q ss_pred             CCCCC---CCCEEEEEEEEEEEE-CCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH-HHHHHHCCC--CCCCCCC
Q ss_conf             56876---565179999999998-9967999998421153225755630456888899999-999998799--8778620
Q gi|254780742|r  306 SLAPN---YQGKTCIGCLINGIY-HGETREIFLYNICDHQNAYQEIASQGISYTAGTPPVA-TAILIAQGI--WDIGKMV  378 (419)
Q Consensus       306 ~~~~~---~~~~~~~~~~v~g~~-~g~~~~~~~~~~~~~~~~~~~~~~~am~~tTg~p~a~-aa~lil~g~--i~~~GV~  378 (419)
T Consensus       292 ~GPt~e~qarg~~~~--~~~~~tatG~r~~ari~t~~------------~-y~stav~~a~~~l~~ald~~~~~~~gGv~  356 (382)
T COG3268         292 TGPTEEAQARGRYTI--EGETTTATGERYTARITTDN------------D-YYSTAVLLAQAALALALDRDKLSEPGGVL  356 (382)
T ss_pred             CCCCHHHHHCCCCEE--EEEEEECCCCCEEEEEECCC------------C-HHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             998989985075147--89987514783036883166------------1-37899999999999974588646788612


Q ss_pred             CHHHCCHHHHHHHHHHCCCEEEEEE
Q ss_conf             7788594899999996798099997
Q gi|254780742|r  379 NIEELPPKPFLGTLQRMGLATSLRT  403 (419)
Q Consensus       379 ~Pe~~~~~~fl~~L~~~Gi~~~v~~  403 (419)
T Consensus       357 TPA~~lG~dlv~rLp~aGv~~~~~~  381 (382)
T COG3268         357 TPAAALGADLVERLPGAGVTFGTTR  381 (382)
T ss_pred             CHHHHHHHHHHHHCCCCCCEEECCC
T ss_conf             7578876789975656660221366