HHsearch alignment for GI: 254780742 and conserved domain: KOG0409

Probab=97.73  E-value=0.00035  Score=47.02  Aligned_cols=93  Identities=18%  Similarity=0.279  Sum_probs=62.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf             73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r    2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN   81 (419)
Q Consensus         2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~   81 (419)
T Consensus        35 ~~~iGFIGLG~MG~~M~~nLik~G~---kVtV~dr~~~k~~~f~~~Ga-----------~v----~~sPaeVae-----~   91 (327)
T KOG0409          35 KTRIGFIGLGNMGSAMVSNLIKAGY---KVTVYDRTKDKCKEFQEAGA-----------RV----ANSPAEVAE-----D   91 (327)
T ss_pred             CCEEEEEEECCCHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCH-----------HH----HCCHHHHHH-----H
T ss_conf             5513577434111899999997598---79999586788789997050-----------14----079799986-----3


Q ss_pred             CCEEEECCCCCCCH-HHH------HHHHHCCCCE-EEECCCCCC
Q ss_conf             72999737610032-789------9998628868-960366420
Q gi|254780742|r   82 SQIIINVGSSFLNM-SVL------RACIDSNVAY-IDTAIHESP  117 (419)
Q Consensus        82 ~dvVin~~~p~~~~-~v~------~a~i~~g~hy-vD~s~~~~~  117 (419)
T Consensus        92 sDvvitmv~~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~  135 (327)
T KOG0409          92 SDVVITMVPNPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPD  135 (327)
T ss_pred             CCEEEEECCCHHHHHHHHCCCCCCEEECCCCCCEEEECCCCCHH
T ss_conf             68899976880766888407786235215888347762446878