HHsearch alignment for GI: 254780742 and conserved domain: KOG1200

Probab=97.91  E-value=8.5e-05  Score=51.15  Aligned_cols=86  Identities=12%  Similarity=0.184  Sum_probs=67.2

Q ss_pred             CCCEEEEECCC-HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf             97319998498-77999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r    1 MKKNVLIIGAG-GVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK   79 (419)
Q Consensus         1 M~k~ilv~GaG-~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~   79 (419)
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~G---arv~v~dl~~~~A~ata~~L~g~~------~h~aF~~DVS~a~~v~~~l~e   83 (256)
T KOG1200          13 MSKVAAVTGGSSGIGRAIAQLLAKKG---ARVAVADLDSAAAEATAGDLGGYG------DHSAFSCDVSKAHDVQNTLEE   83 (256)
T ss_pred             HCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHCCCCC------CCCEEEECCCCHHHHHHHHHH
T ss_conf             46224873487507799999997469---679975032244799986268877------652353046757889999999


Q ss_pred             C-----CCCEEEECCCCCCCH
Q ss_conf             3-----972999737610032
Q gi|254780742|r   80 T-----NSQIIINVGSSFLNM   95 (419)
Q Consensus        80 ~-----~~dvVin~~~p~~~~   95 (419)
T Consensus        84 ~~k~~g~psvlVncAGItrD~  104 (256)
T KOG1200          84 MEKSLGTPSVLVNCAGITRDG  104 (256)
T ss_pred             HHHHCCCCCEEEECCCCCCCC
T ss_conf             998429972899757646530