HHsearch alignment for GI: 254780742 and conserved domain: PRK00258
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed.
Probab=98.85 E-value=5.1e-08 Score=72.94 Aligned_cols=127 Identities=17% Similarity=0.267 Sum_probs=90.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
T Consensus 122 ~k~vlIlGaGGaarai~~al~~~g~--~~i~i~nR~~~~a~~l~~~~~~~--------~~~~-----~~~~~~~~~~--~ 184 (275)
T PRK00258 122 GKRILLLGAGGAARAVILPLLELGV--AEITIVNRTVERAEELAELFGEG--------VQAL-----GLDELAGELA--D 184 (275)
T ss_pred CCEEEEECCCCHHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHCCC--------CCEE-----EHHHHHHCCC--C
T ss_conf 8759998887107999999997699--98999958999999999983567--------6275-----3787543044--5
Q ss_pred CCEEEECCCCCCC---HHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHH
Q ss_conf 7299973761003---2789999862886896036642000014420000357751088885188699537501114889
Q gi|254780742|r 82 SQIIINVGSSFLN---MSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNA 158 (419)
Q Consensus 82 ~dvVin~~~p~~~---~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~l 158 (419)
T Consensus 185 ~diiInaTp~Gm~~~~~~~~~~~~~~~~~v~D~~Y~P~~T--------------~ll~~a~~~G~~~i~Gl-------~M 243 (275)
T PRK00258 185 FDLIINTTSAGMSGELPPLPASLLRPGTVVYDMIYGPLPT--------------PFLAWAKAQGARTVDGL-------GM 243 (275)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCC--------------HHHHHHHHCCCEEECCH-------HH
T ss_conf 7779965777777886511387648886699866579999--------------99999998829485779-------99
Q ss_pred HHHHHHHH
Q ss_conf 99999997
Q gi|254780742|r 159 FARLAQDE 166 (419)
Q Consensus 159 la~~~~~~ 166 (419)
T Consensus 244 li~Qa~~q 251 (275)
T PRK00258 244 LVHQAAEA 251 (275)
T ss_pred HHHHHHHH
T ss_conf 99999999