HHsearch alignment for GI: 254780742 and conserved domain: PRK01438

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=96.74  E-value=0.018  Score=35.44  Aligned_cols=91  Identities=8%  Similarity=0.063  Sum_probs=51.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEE-CCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf             7319998498779999999996089872599963-999999999987343024555557308994378989999999753
Q gi|254780742|r    2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIAS-RTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT   80 (419)
Q Consensus         2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~-r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~   80 (419)
T Consensus        14 gk~v~V~GlG~sG~s~a~~L~~~G~---~v~~~D~~~~~~~~~~~~~l~~~-------g~~~~~g--~~~~~---~~~--   76 (481)
T PRK01438         14 GLRVVVAGLGVSGFPAADALHELGA---SVTVVADGDDDRSRERAALLEVL-------GATVRLG--DGETT---LPE--   76 (481)
T ss_pred             CCEEEEEEECHHHHHHHHHHHHCCC---EEEEEECCCCCCCHHHHHHHHHC-------CCEEEEC--CCHHH---HHC--
T ss_conf             9989999575889999999996799---89999799874486899988854-------9889968--87566---624--


Q ss_pred             CCCEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf             97299973761003278999986288689
Q gi|254780742|r   81 NSQIIINVGSSFLNMSVLRACIDSNVAYI  109 (419)
Q Consensus        81 ~~dvVin~~~p~~~~~v~~a~i~~g~hyv  109 (419)
T Consensus        77 ~~d~vV~SPGI~~~~p~~~~a~~~gi~i~  105 (481)
T PRK01438         77 GTELVVTSPGWRPTHPLLAAAAEAGIPVW  105 (481)
T ss_pred             CCCEEEECCCCCCCCHHHHHHHHCCCCEE
T ss_conf             89999989978998999999998699386