HHsearch alignment for GI: 254780742 and conserved domain: PRK04308

Probab=96.76  E-value=0.017  Score=35.61  Aligned_cols=89  Identities=15%  Similarity=0.127  Sum_probs=51.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHH--HHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf             73199984987799999999960898725999639999--9999998734302455555730899437898999999975
Q gi|254780742|r    2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQ--KCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK   79 (419)
Q Consensus         2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~   79 (419)
T Consensus         5 ~k~v~viGlG~sG~s~a~~L~~~G---~~v~~~D~~~~~~~~~~~~~~~---------~~i~~~~g~--~~~~---~~~-   66 (445)
T PRK04308          5 NKKILVAGLGGTGISMIAYLRKNG---AEVAAYDAELKAERVAQIGKMF---------DGLVFYTGR--LKDA---LDN-   66 (445)
T ss_pred             CCEEEEEEECHHHHHHHHHHHHCC---CEEEEEECCCCCCHHHHHHHCC---------CCCEEEECC--CHHH---HCC-
T ss_conf             998999998999999999999789---9199997999953189997436---------996899378--6365---015-


Q ss_pred             CCCCEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf             397299973761003278999986288689
Q gi|254780742|r   80 TNSQIIINVGSSFLNMSVLRACIDSNVAYI  109 (419)
Q Consensus        80 ~~~dvVin~~~p~~~~~v~~a~i~~g~hyv  109 (419)
T Consensus        67 -~~d~vV~SPgI~~~~p~l~~a~~~gi~i~   95 (445)
T PRK04308         67 -GFDILALSPGISERQPDIEAFKQNGGRVL   95 (445)
T ss_pred             -CCCEEEECCCCCCCCHHHHHHHHCCCCEE
T ss_conf             -99999989953899999999997599571