HHsearch alignment for GI: 254780742 and conserved domain: PRK08300

Probab=96.57  E-value=0.022  Score=34.88  Aligned_cols=148  Identities=15%  Similarity=0.126  Sum_probs=88.4

Q ss_pred             CCC-EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHH-HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf             973-1999849877999999999608987259996399999-99999873430245555573089943789899999997
Q gi|254780742|r    1 MKK-NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQK-CSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK   78 (419)
Q Consensus         1 M~k-~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~   78 (419)
T Consensus         2 ~~k~~vAIiGsGnIGtDLm~Ki~R-s~~le~~~~vG~dp~S~GL~rA~~lG----------v~t---s~~GId~ll~~~~   67 (298)
T PRK08300          2 MSKIKVAIIGSGNIGTDLMIKILR-SPHLEPVAMVGIDPESDGLARARRLG----------VAT---TAEGIDGLLAHPE   67 (298)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHC-CCCEEEEEEEECCCCCHHHHHHHHCC----------CCC---CCCCHHHHHHCCC
T ss_conf             875349998888338999999865-77610699980598984999999849----------966---3767999961833


Q ss_pred             HCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCC-CHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
Q ss_conf             53972999737610032789999862886896036642-00001442000035775108888518869953750111488
Q gi|254780742|r   79 KTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHES-PLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVN  157 (419)
Q Consensus        79 ~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~-~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~  157 (419)
T Consensus        68 ~~~idiVFDATSA~aH~~h~~~l~~~g~~~IDLTPAaiGp~~--VP~-------VNl~~~l~~~NvNMVTCGGQAtiPi-  137 (298)
T PRK08300         68 FDDIDIVFDATSAGAHVENAAKLRELGVRVIDLTPAAIGPYC--VPA-------VNLDEHLDAPNVNMVTCGGQATIPI-  137 (298)
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEE--ECC-------CCHHHHCCCCCCCEEEECCCHHHHH-
T ss_conf             568788997898066899999999739879967700269878--763-------7789955799864365557302189-


Q ss_pred             HHHHHHHHHHCCCCCEEEE
Q ss_conf             9999999974366638976
Q gi|254780742|r  158 AFARLAQDEYFDKITDIDI  176 (419)
Q Consensus       158 lla~~~~~~~~d~~~~i~~  176 (419)
T Consensus       138 --v-~Avsrv-~~V~YaEi  152 (298)
T PRK08300        138 --V-AAVSRV-APVHYAEI  152 (298)
T ss_pred             --H-HHHHHC-CCCCEEEE
T ss_conf             --9-998742-76317998