HHsearch alignment for GI: 254780742 and conserved domain: PRK08642

Probab=97.95  E-value=0.00015  Score=49.43  Aligned_cols=80  Identities=14%  Similarity=0.209  Sum_probs=60.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECC-HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf             731999849-877999999999608987259996399-999999998734302455555730899437898999999975
Q gi|254780742|r    2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRT-LQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK   79 (419)
Q Consensus         2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~   79 (419)
T Consensus         6 gK~alVTGas~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~g--------~~~~~~~~Dv~~~~~~~~~v~~   74 (254)
T PRK08642          6 EQIVLVTGGSRGLGAAIARAFAREGA---RVVVNYHRSEDAAEALADELG--------DRAIAIQADVTDRNQVDAMFAT   74 (254)
T ss_pred             CCEEEEECHHHHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHC--------CCEEEEEECCCCHHHHHHHHHH
T ss_conf             89999978111999999999998799---999961898899999999819--------9469998069999999999999


Q ss_pred             C-----C-CCEEEECCCCC
Q ss_conf             3-----9-72999737610
Q gi|254780742|r   80 T-----N-SQIIINVGSSF   92 (419)
Q Consensus        80 ~-----~-~dvVin~~~p~   92 (419)
T Consensus        75 ~~~~~G~~idilVnnA~~~   93 (254)
T PRK08642         75 ATEHFGKPITTVVNNALAD   93 (254)
T ss_pred             HHHHHCCCCEEEEECCEEC
T ss_conf             9999499776998676422