HHsearch alignment for GI: 254780742 and conserved domain: PRK08644

>PRK08644 thiamine biosynthesis protein ThiF; Provisional.
Probab=98.39  E-value=1.3e-05  Score=56.70  Aligned_cols=103  Identities=18%  Similarity=0.348  Sum_probs=73.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECC------------------HHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             731999849877999999999608987259996399------------------99999999873430245555573089
Q gi|254780742|r    2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRT------------------LQKCSKIIDSIYKKKSLKIDGKLAIH   63 (419)
Q Consensus         2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~------------------~~~~~~~~~~l~~~~~~~~~~~~~~~   63 (419)
T Consensus        27 ~s~VlivG~GGLG~~~a~~La~aG-V-G~i~lvD~D~Ve~SNL~RQ~~~~~diG~~Ka~~a~~~l~~iNp---~v~I~~~  101 (209)
T PRK08644         27 KAKVGIAGAGGLGSNIAVALARSG-V-GNLKLVDFDVVEPSNLNRQQYFISQIGMFKVEALKENLLRINP---FVKIEVH  101 (209)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHHC-C-CEEEEEECCEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCC---CEEEEEE
T ss_conf             296899888788999999999938-9-8189988999015411037567877597569999999874489---8289997


Q ss_pred             EECCCCHHHHHHHHHHCCCCEEEECCCCCC-CHHHHHHHHH-CCCCEEEEC
Q ss_conf             943789899999997539729997376100-3278999986-288689603
Q gi|254780742|r   64 QVDALNIKAVVELIKKTNSQIIINVGSSFL-NMSVLRACID-SNVAYIDTA  112 (419)
Q Consensus        64 ~~D~~d~~~l~~~~~~~~~dvVin~~~p~~-~~~v~~a~i~-~g~hyvD~s  112 (419)
T Consensus       102 ~~~-l~~~n~~~l~~~--~DiViDctDN~~tR~li~~~c~~~~~~plV~as  149 (209)
T PRK08644        102 QVK-IDEDNIEELFKD--CDIVVEAFDNAETKAMLVETVLEKKGKKVVSAS  149 (209)
T ss_pred             ECC-CCHHHHHHHHHC--CCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             224-898999999857--999999999999999999999997799689996