HHsearch alignment for GI: 254780742 and conserved domain: PRK08644
>PRK08644 thiamine biosynthesis protein ThiF; Provisional.
Probab=98.39 E-value=1.3e-05 Score=56.70 Aligned_cols=103 Identities=18% Similarity=0.348 Sum_probs=73.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECC------------------HHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 731999849877999999999608987259996399------------------99999999873430245555573089
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRT------------------LQKCSKIIDSIYKKKSLKIDGKLAIH 63 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~------------------~~~~~~~~~~l~~~~~~~~~~~~~~~ 63 (419)
T Consensus 27 ~s~VlivG~GGLG~~~a~~La~aG-V-G~i~lvD~D~Ve~SNL~RQ~~~~~diG~~Ka~~a~~~l~~iNp---~v~I~~~ 101 (209)
T PRK08644 27 KAKVGIAGAGGLGSNIAVALARSG-V-GNLKLVDFDVVEPSNLNRQQYFISQIGMFKVEALKENLLRINP---FVKIEVH 101 (209)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHC-C-CEEEEEECCEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCC---CEEEEEE
T ss_conf 296899888788999999999938-9-8189988999015411037567877597569999999874489---8289997
Q ss_pred EECCCCHHHHHHHHHHCCCCEEEECCCCCC-CHHHHHHHHH-CCCCEEEEC
Q ss_conf 943789899999997539729997376100-3278999986-288689603
Q gi|254780742|r 64 QVDALNIKAVVELIKKTNSQIIINVGSSFL-NMSVLRACID-SNVAYIDTA 112 (419)
Q Consensus 64 ~~D~~d~~~l~~~~~~~~~dvVin~~~p~~-~~~v~~a~i~-~g~hyvD~s 112 (419)
T Consensus 102 ~~~-l~~~n~~~l~~~--~DiViDctDN~~tR~li~~~c~~~~~~plV~as 149 (209)
T PRK08644 102 QVK-IDEDNIEELFKD--CDIVVEAFDNAETKAMLVETVLEKKGKKVVSAS 149 (209)
T ss_pred ECC-CCHHHHHHHHHC--CCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 224-898999999857--999999999999999999999997799689996