HHsearch alignment for GI: 254780742 and conserved domain: PRK08655

>PRK08655 prephenate dehydrogenase; Provisional.
Probab=97.88  E-value=9.4e-05  Score=50.84  Aligned_cols=89  Identities=16%  Similarity=0.244  Sum_probs=66.0

Q ss_pred             EEEEE-CCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf             19998-49877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r    4 NVLII-GAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS   82 (419)
Q Consensus         4 ~ilv~-GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~   82 (419)
T Consensus         2 kI~IIGG~G~MG~~Fa~~f~~sG-y--eV~I~gRd~~k~~~va~~LGv~-----------------~~~~~~e~~~--~a   59 (441)
T PRK08655          2 KISIIGGTGGLGKWFARFLKDKG-Y--EVIVWGRDPKKGKEVAKELGVE-----------------YASDNIDAAK--DG   59 (441)
T ss_pred             EEEEEECCCHHHHHHHHHHHHCC-C--EEEEEECCCCHHHHHHHHHCCC-----------------CCCCHHHHHH--CC
T ss_conf             79999479817799999998679-8--8999815731356788873862-----------------2244788972--49


Q ss_pred             CEEEECCCCCCCHHHHH-HH--HHCCCCEEEECCC
Q ss_conf             29997376100327899-99--8628868960366
Q gi|254780742|r   83 QIIINVGSSFLNMSVLR-AC--IDSNVAYIDTAIH  114 (419)
Q Consensus        83 dvVin~~~p~~~~~v~~-a~--i~~g~hyvD~s~~  114 (419)
T Consensus        60 dvVIvsVPI~~T~~VI~~laP~l~~~~lL~DitSv   94 (441)
T PRK08655         60 DIVIVSVPINVTEDVIREVAPHVKEGSLLMDVTSV   94 (441)
T ss_pred             CEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCC
T ss_conf             99999848899999999974248999699983104