HHsearch alignment for GI: 254780742 and conserved domain: PRK08664

Probab=98.05  E-value=0.00023  Score=48.17  Aligned_cols=104  Identities=16%  Similarity=0.142  Sum_probs=64.4

Q ss_pred             CCC-EEEEECC-CHHHHHHHHHHHHCCCCCCEEE-EE-ECCHHHHHHHHHHHHHHCCCCC---CCCCEEEEECCCCHHHH
Q ss_conf             973-1999849-8779999999996089872599-96-3999999999987343024555---55730899437898999
Q gi|254780742|r    1 MKK-NVLIIGA-GGVAHVVAHKCAQNNDILGDIN-IA-SRTLQKCSKIIDSIYKKKSLKI---DGKLAIHQVDALNIKAV   73 (419)
Q Consensus         1 M~k-~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~-va-~r~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~D~~d~~~l   73 (419)
T Consensus         1 M~kikvaIvGatGy~G~ELirlL~~HP~~--ei~~l~aS~~~-aGk~~~~~~~~~~~~~~p~~~~~l~~~~~~---~~~-   73 (350)
T PRK08664          1 MDKLKVGVLGATGLVGQRFVQLLANHPWF--EVTALAASERS-AGKTYGEAVRWQLDGPIPEEVADLEVVSTD---PVD-   73 (350)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHCCCCC--EEEEEEECCCC-CCCCHHHHHCCCCCCCCCCCCCCEEEEECC---HHH-
T ss_conf             99777999898429999999999709996--68999965533-788415520322346676444650798688---457-


Q ss_pred             HHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCC
Q ss_conf             9999753972999737610032789999862886896036642
Q gi|254780742|r   74 VELIKKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHES  116 (419)
Q Consensus        74 ~~~~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~  116 (419)
T Consensus        74 ---~~--~~DvvF~AlPhg~s~~~~~~l~~~g~~VIDlSadfR  111 (350)
T PRK08664         74 ---VD--DVDIVFSALPSDVAAEVEEEFAKAGKPVFSNASAHR  111 (350)
T ss_pred             ---HC--CCCEEEECCCCHHHHHHHHHHHHCCCEEEECCHHHC
T ss_conf             ---43--899999989826999999999877988997862203