HHsearch alignment for GI: 254780742 and conserved domain: PRK12550
>PRK12550 shikimate 5-dehydrogenase; Reviewed.
Probab=98.42 E-value=3.1e-06 Score=60.88 Aligned_cols=121 Identities=21% Similarity=0.237 Sum_probs=85.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
T Consensus 122 ~~~~lilGaGGaarai~~aL~~~G-~-~~i~I~nR~~~~a~~L~~~~~~~~----~~-------~~----------~~~~ 178 (272)
T PRK12550 122 DAVVALRGSGGMAKAVAAALRDAG-F-TDGTIVARNEKTGKALAELYGYEW----RP-------DL----------GGIE 178 (272)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHCCCCC----CC-------CC----------CCCC
T ss_conf 773899736233899999999769-9-879999899899999998739733----46-------43----------3466
Q ss_pred CCEEEECCCCCCC-------HHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHH
Q ss_conf 7299973761003-------278999986288689603664200001442000035775108888518869953750111
Q gi|254780742|r 82 SQIIINVGSSFLN-------MSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPG 154 (419)
Q Consensus 82 ~dvVin~~~p~~~-------~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PG 154 (419)
T Consensus 179 ~dliINaTpvGm~~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T--------------~ll~~A~~~G~~~i~Gl----- 239 (272)
T PRK12550 179 ADLLVNVTPIGMAGGPEADKLAFSEAEIDAASVVFDVVALPAET--------------PLIRYARARGKTVITGA----- 239 (272)
T ss_pred CCEEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCC--------------HHHHHHHHCCCCEECCH-----
T ss_conf 89799667665578975345889978858887899974389878--------------99999998849362769-----
Q ss_pred HHHHHHHHHHHH
Q ss_conf 488999999997
Q gi|254780742|r 155 VVNAFARLAQDE 166 (419)
Q Consensus 155 l~~lla~~~~~~ 166 (419)
T Consensus 240 --~MLi~Qa~~q 249 (272)
T PRK12550 240 --EVIALQAVEQ 249 (272)
T ss_pred --HHHHHHHHHH
T ss_conf --9999999999