HHsearch alignment for GI: 254780742 and conserved domain: PRK13940
>PRK13940 glutamyl-tRNA reductase; Provisional.
Probab=98.28 E-value=1.1e-05 Score=57.19 Aligned_cols=73 Identities=32% Similarity=0.440 Sum_probs=57.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
T Consensus 181 ~~~vlvvGaGem~~l~~k~L~~~g~--~~i~v~nRt~~ra~~la~~~~~~~--------------~~~~~~l~~~l~--~ 242 (414)
T PRK13940 181 SKNVLIIGAGQTGELLFRHVTALAP--KQIMLANRTIEKAQKITSAFRNAS--------------AHYLSELPQLIK--K 242 (414)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--CEEEEECCCHHHHHHHHHHHCCCC--------------CCCHHHHHHHHH--H
T ss_conf 2838996686478999999997699--879994575677999999708885--------------016999999986--3
Q ss_pred CCEEEECCCCC
Q ss_conf 72999737610
Q gi|254780742|r 82 SQIIINVGSSF 92 (419)
Q Consensus 82 ~dvVin~~~p~ 92 (419)
T Consensus 243 aDivisaT~a~ 253 (414)
T PRK13940 243 ADIIIAAVNVL 253 (414)
T ss_pred CCEEEEECCCC
T ss_conf 88799816982