HHsearch alignment for GI: 254780742 and conserved domain: TIGR01829
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase; InterPro: IPR011283 This entry represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of 1.1.1.36 from EC is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. ; GO: 0018454 acetoacetyl-CoA reductase activity, 0042619 poly-hydroxybutyrate biosynthetic process, 0005737 cytoplasm.
Probab=97.77 E-value=0.0002 Score=48.68 Aligned_cols=84 Identities=12% Similarity=0.172 Sum_probs=62.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
T Consensus 1 rvALVTGg~GGIGtAIC~rL~~dG~----~V~An~~p~N~~~a~~W~~~~~~--~g~~~~~~~~DV~~~e~c~~~v~~v~ 74 (244)
T TIGR01829 1 RVALVTGGTGGIGTAICTRLAKDGY----RVAANYVPSNEERAEAWLQEQGA--QGFDFAVVEGDVSSFEDCKAAVAKVE 74 (244)
T ss_pred CEEEEECCCCCHHHHHHHHHHHCCC----EEEECCCCCCHHHHHHHHHHHCC--CCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9478857877446899999987598----89881789825899999986269--85147898727677789999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
T Consensus 75 a~lGpvDvLVNNAGIT 90 (244)
T TIGR01829 75 AELGPVDVLVNNAGIT 90 (244)
T ss_pred HCCCCEEEEEECCCCC
T ss_conf 7119536898688644