HHsearch alignment for GI: 254780742 and conserved domain: TIGR01830
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284 This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis . Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process.
Probab=97.79 E-value=0.00024 Score=48.11 Aligned_cols=142 Identities=17% Similarity=0.198 Sum_probs=91.3
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCCCCEEEEEEC-CHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC--
Q ss_conf 999849-87799999999960898725999639-99999999987343024555557308994378989999999753--
Q gi|254780742|r 5 VLIIGA-GGVAHVVAHKCAQNNDILGDINIASR-TLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT-- 80 (419)
Q Consensus 5 ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-- 80 (419)
T Consensus 1 AlVTGasRGIG~AIA~~LA~~Ga---~V~i~y~~~e~~~~~~~~e~~~~G-----~~a~~~~~dvs~~~~~~~~~~~~~~ 72 (238)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA---KVIITYRTSEEGAEEVVEEIKELG-----VKAAGVVLDVSDREDVKALVEEAEE 72 (238)
T ss_pred CEECCCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHCC-----CEEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 96716786167999999986799---599965982578889999998569-----7599996038888999999999999
Q ss_pred --CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHH
Q ss_conf --972999737610032789999862886896036642000014420000357751088885188699537501114889
Q gi|254780742|r 81 --NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNA 158 (419)
Q Consensus 81 --~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~l 158 (419)
T Consensus 73 ~~GiDiLVNNAGITrD~--------------------Ll~RMk~---------edWd~V-i~~NL~g~------F~~t~~ 116 (238)
T TIGR01830 73 ELGIDILVNNAGITRDN--------------------LLMRMKE---------EDWDAV-INVNLKGV------FNLTQA 116 (238)
T ss_pred HHCCEEEEECCCCCCCC--------------------HHCCCCH---------HHHHHH-HHHHHHHH------HHHHHH
T ss_conf 82990899787413430--------------------1004885---------568999-98612668------788899
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCCC-CCC
Q ss_conf 99999997436663897630247888866-654
Q gi|254780742|r 159 FARLAQDEYFDKITDIDIIDVNAGKHDKY-FAT 190 (419)
Q Consensus 159 la~~~~~~~~d~~~~i~~~~~~~~~~~~~-~~~ 190 (419)
T Consensus 117 v~~~M~K~R~GrIINisSVVG~~GN~GQaNYaA 149 (238)
T TIGR01830 117 VLRPMIKQRSGRIINISSVVGLMGNAGQANYAA 149 (238)
T ss_pred HHHHHHHHCCCCEEEEEEHHHHHCCCCHHHHHH
T ss_conf 889887506743486100200006874267888