HHsearch alignment for GI: 254780742 and conserved domain: TIGR01963
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase; InterPro: IPR011294 This entry represents a subfamily of the short chain dehydrogenases. Characterised members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polymers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.; GO: 0003858 3-hydroxybutyrate dehydrogenase activity.
Probab=98.05 E-value=7.7e-05 Score=51.45 Aligned_cols=85 Identities=14% Similarity=0.201 Sum_probs=72.7
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECC--HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 731999849-877999999999608987259996399--99999999873430245555573089943789899999997
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRT--LQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
T Consensus 1 ~ktalVTGaaSGIG~~iA~~LA~aGa---~v~~~d~~~~~~~~~~~~~~~~~~G-----~~v~~~~~D~T~~~e~~~~~~ 72 (258)
T TIGR01963 1 GKTALVTGAASGIGLAIAKALAAAGA---NVVVNDLGEADEGAEAAAKVATDAG-----GSVIYLVADVTKEEEIADMIQ 72 (258)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHH
T ss_conf 94899965871678999999987298---8998467887899999999999618-----835775147888899999999
Q ss_pred HC-----CCCEEEECCCCCCC
Q ss_conf 53-----97299973761003
Q gi|254780742|r 79 KT-----NSQIIINVGSSFLN 94 (419)
Q Consensus 79 ~~-----~~dvVin~~~p~~~ 94 (419)
T Consensus 73 ~~~~~fG~~DiLVNNAG~QhV 93 (258)
T TIGR01963 73 AVAAEFGGLDILVNNAGIQHV 93 (258)
T ss_pred HHHHHHCCCCEEEECCCEEEC
T ss_conf 999985688748844640141