HHsearch alignment for GI: 254780742 and conserved domain: cd01078
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.35 E-value=4.8e-06 Score=59.60 Aligned_cols=99 Identities=18% Similarity=0.250 Sum_probs=71.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
T Consensus 28 g~~~~V~G~tG~vG~~~A~~lA~~Ga---~v~lv~R~~ek~~~~a~~i~~r~g------~~~~~~~~~~~~~~~~~l~-- 96 (194)
T cd01078 28 GKTAVVLGGTGPVGQRAAVLLAREGA---RVVLVGRDLERAQKAADSLRARFG------EGVGAVETSDDAARAAAIK-- 96 (194)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHCC------CCCCCCCCCCHHHHHHHHC--
T ss_conf 98899985885789999999998399---799995878889999999999709------8731135788778997746--
Q ss_pred CCCEEEECCCCCCCHHHHHHHHH---CCCCEEEECC
Q ss_conf 97299973761003278999986---2886896036
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRACID---SNVAYIDTAI 113 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~i~---~g~hyvD~s~ 113 (419)
T Consensus 97 ~adiV~~a~aAGv--~~~~~~~~~~k~l~Vv~DVNA 130 (194)
T cd01078 97 GADVVFAAGAAGV--ELLEKLAWAPKPLAVAADVNA 130 (194)
T ss_pred CCCEEEECCHHHH--HHHHHHHHCCCCCEEEEECCC
T ss_conf 6989996427778--887888850888659986589