HHsearch alignment for GI: 254780742 and conserved domain: cd05290
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.61 E-value=0.00015 Score=49.46 Aligned_cols=79 Identities=14% Similarity=0.148 Sum_probs=57.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
T Consensus 1 KI~IIGaG~VG~~~A~~l~~~~~-~~elvL~Di~~~~a~g~a~Dl~h~~~~~~~---~~~~~~~~~y~~~----~--~aD 70 (307)
T cd05290 1 KLVVIGAGHVGSAVLNYALALGL-FSEIVLIDVNEGVAEGEALDFHHATALTYS---TNTKIRAGDYDDC----A--DAD 70 (307)
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-CCEEEEEECCCCCCHHHHHHHHHHCCCCCC---CCEEECCCCHHHH----C--CCC
T ss_conf 98999969899999999985699-887999928898237999987612035899---8658667998994----6--999
Q ss_pred EEEECCCCC
Q ss_conf 999737610
Q gi|254780742|r 84 IIINVGSSF 92 (419)
Q Consensus 84 vVin~~~p~ 92 (419)
T Consensus 71 iVVitaG~~ 79 (307)
T cd05290 71 IIVITAGPS 79 (307)
T ss_pred EEEECCCCC
T ss_conf 999867776