HHsearch alignment for GI: 254780742 and conserved domain: cd05291
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.61 E-value=0.00029 Score=47.58 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=56.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
T Consensus 1 rKI~IIGaG~VG~~~a~~l~~~~l-~~el~L~Di~~~~a~G~a~DL~~~~~~~-~~~~~i---~~~~~~~----~~--~a 69 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGI-ADELVLIDINEEKAEGEALDLEDALAFL-PSPVKI---KAGDYSD----CK--DA 69 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-CCEEEEECCCCCCCHHHHHHHHHHHHHC-CCCEEE---EECCHHH----HC--CC
T ss_conf 959999969889999999985799-8779998189870176999887013305-997399---6088788----47--89
Q ss_pred CEEEECCCCC
Q ss_conf 2999737610
Q gi|254780742|r 83 QIIINVGSSF 92 (419)
Q Consensus 83 dvVin~~~p~ 92 (419)
T Consensus 70 DvvVitAG~~ 79 (306)
T cd05291 70 DIVVITAGAP 79 (306)
T ss_pred CEEEECCCCC
T ss_conf 9999906766