HHsearch alignment for GI: 254780742 and conserved domain: cd05294

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.56  E-value=0.0073  Score=38.07  Aligned_cols=79  Identities=25%  Similarity=0.272  Sum_probs=49.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCH--HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf             1999849-8779999999996089872599963999--999999987343024555557308994378989999999753
Q gi|254780742|r    4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTL--QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT   80 (419)
Q Consensus         4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~   80 (419)
T Consensus         2 KV~IiGAaG~VG~~~a~~l~~~~-~~~el~LiD~~~~~~~a~g~a~Dl~~~~~~~~-~~~~i~--~~~d~~----~~~--   71 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKED-VVKEINLISRPKSLEKLKGLRLDIYDALAAAG-IDAEIK--ISSDLS----DVA--   71 (309)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCC-CCCEEEEEECCCCCCCCCEEEHHHHCCCCCCC-CCCEEE--ECCCHH----HHC--
T ss_conf             89999999769999999998379-98759996055643423112355450343368-876798--279889----968--


Q ss_pred             CCCEEEECCCCC
Q ss_conf             972999737610
Q gi|254780742|r   81 NSQIIINVGSSF   92 (419)
Q Consensus        81 ~~dvVin~~~p~   92 (419)
T Consensus        72 daDivVitAG~~   83 (309)
T cd05294          72 GSDIVIITAGVP   83 (309)
T ss_pred             CCCEEEECCCCC
T ss_conf             999999878988