HHsearch alignment for GI: 254780742 and conserved domain: cd05294
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.56 E-value=0.0073 Score=38.07 Aligned_cols=79 Identities=25% Similarity=0.272 Sum_probs=49.0
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCH--HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 1999849-8779999999996089872599963999--999999987343024555557308994378989999999753
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTL--QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
T Consensus 2 KV~IiGAaG~VG~~~a~~l~~~~-~~~el~LiD~~~~~~~a~g~a~Dl~~~~~~~~-~~~~i~--~~~d~~----~~~-- 71 (309)
T cd05294 2 KVSIIGASGRVGSATALLLAKED-VVKEINLISRPKSLEKLKGLRLDIYDALAAAG-IDAEIK--ISSDLS----DVA-- 71 (309)
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-CCCEEEEEECCCCCCCCCEEEHHHHCCCCCCC-CCCEEE--ECCCHH----HHC--
T ss_conf 89999999769999999998379-98759996055643423112355450343368-876798--279889----968--
Q ss_pred CCCEEEECCCCC
Q ss_conf 972999737610
Q gi|254780742|r 81 NSQIIINVGSSF 92 (419)
Q Consensus 81 ~~dvVin~~~p~ 92 (419)
T Consensus 72 daDivVitAG~~ 83 (309)
T cd05294 72 GSDIVIITAGVP 83 (309)
T ss_pred CCCEEEECCCCC
T ss_conf 999999878988