Query gi|254780742|ref|YP_003065155.1| hypothetical protein CLIBASIA_03145 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 419
No_of_seqs 133 out of 1287
Neff 8.7
Searched_HMMs 39220
Date Sun May 29 20:40:16 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780742.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1748 LYS9 Saccharopine dehy 100.0 0 0 513.2 35.7 377 2-406 1-382 (389)
2 pfam03435 Saccharop_dh Sacchar 100.0 0 0 464.6 37.4 367 5-399 1-383 (384)
3 KOG0172 consensus 100.0 1.2E-41 0 300.2 18.7 372 1-402 1-443 (445)
4 KOG2733 consensus 100.0 2E-36 5E-41 264.9 17.0 377 3-404 6-422 (423)
5 COG3268 Uncharacterized conser 100.0 3.5E-31 8.9E-36 229.5 23.7 355 1-403 5-381 (382)
6 pfam06408 consensus 99.6 4.2E-12 1.1E-16 100.5 20.7 239 3-253 2-303 (471)
7 PRK13304 L-aspartate dehydroge 98.9 7.9E-08 2E-12 71.6 13.8 144 1-178 1-144 (265)
8 cd01065 NAD_bind_Shikimate_DH 98.9 2E-08 5E-13 75.7 10.1 127 2-166 19-149 (155)
9 PRK07024 short chain dehydroge 98.9 2.8E-08 7.2E-13 74.6 10.8 83 1-93 1-89 (256)
10 COG0673 MviM Predicted dehydro 98.9 5.1E-07 1.3E-11 66.2 16.1 150 1-178 2-152 (342)
11 PRK00258 aroE shikimate 5-dehy 98.8 5.1E-08 1.3E-12 72.9 10.8 127 2-166 122-251 (275)
12 PRK12384 sorbitol-6-phosphate 98.8 1.2E-07 3.1E-12 70.4 11.4 87 1-93 1-93 (259)
13 PRK08251 short chain dehydroge 98.8 1.1E-07 2.7E-12 70.7 11.0 85 2-92 2-92 (248)
14 PRK11579 putative oxidoreducta 98.8 4.8E-07 1.2E-11 66.3 14.2 143 1-177 1-148 (346)
15 PRK13302 putative L-aspartate 98.8 1.2E-06 3.1E-11 63.6 16.2 142 3-179 7-148 (271)
16 COG1086 Predicted nucleoside-d 98.8 8.3E-07 2.1E-11 64.7 15.1 163 2-200 250-432 (588)
17 PRK12549 shikimate 5-dehydroge 98.8 8.6E-08 2.2E-12 71.4 9.5 130 2-166 127-260 (284)
18 PRK13301 putative L-aspartate 98.8 2.8E-07 7.1E-12 68.0 12.1 132 1-161 1-133 (267)
19 PRK06482 short chain dehydroge 98.8 1.8E-07 4.5E-12 69.3 11.0 82 1-93 1-88 (276)
20 PRK08643 acetoin reductase; Va 98.7 2.6E-07 6.6E-12 68.2 11.4 85 1-93 1-91 (256)
21 CHL00194 ycf39 Ycf39; Provisio 98.7 1.1E-06 2.9E-11 63.8 14.3 138 4-160 2-156 (319)
22 PRK07454 short chain dehydroge 98.7 3.5E-07 8.9E-12 67.3 11.4 84 2-93 6-95 (241)
23 COG0300 DltE Short-chain dehyd 98.7 2.6E-07 6.7E-12 68.1 10.7 86 1-93 5-96 (265)
24 PRK07775 short chain dehydroge 98.7 3E-07 7.7E-12 67.7 10.7 84 2-93 10-99 (275)
25 PRK08263 short chain dehydroge 98.7 4.4E-07 1.1E-11 66.6 11.2 82 1-93 2-89 (275)
26 pfam01408 GFO_IDH_MocA Oxidore 98.7 8.4E-07 2.2E-11 64.7 12.5 118 4-148 2-119 (120)
27 PRK07832 short chain dehydroge 98.7 4.2E-07 1.1E-11 66.7 10.7 83 3-92 1-89 (272)
28 PRK06181 short chain dehydroge 98.7 5.7E-07 1.4E-11 65.9 11.2 83 3-93 2-90 (263)
29 PRK06940 short chain dehydroge 98.6 5.6E-07 1.4E-11 65.9 10.9 83 1-92 3-90 (277)
30 COG0169 AroE Shikimate 5-dehyd 98.6 3.4E-07 8.6E-12 67.4 9.8 128 3-166 127-259 (283)
31 COG5310 Homospermidine synthas 98.6 3.1E-07 7.9E-12 67.6 9.4 238 3-251 14-311 (481)
32 TIGR02356 adenyl_thiF thiazole 98.6 8.6E-07 2.2E-11 64.6 11.5 106 2-113 21-148 (210)
33 PRK05653 fabG 3-ketoacyl-(acyl 98.6 8.2E-07 2.1E-11 64.8 11.2 83 3-93 6-94 (246)
34 PRK05872 short chain dehydroge 98.6 5.1E-07 1.3E-11 66.1 10.0 81 2-93 9-95 (296)
35 PRK05866 short chain dehydroge 98.6 7.4E-07 1.9E-11 65.1 10.8 84 3-94 41-130 (290)
36 PRK07062 short chain dehydroge 98.6 9.6E-07 2.5E-11 64.3 11.3 85 3-93 9-99 (265)
37 PRK09072 short chain dehydroge 98.6 8.8E-07 2.2E-11 64.6 11.1 82 2-93 5-91 (262)
38 PRK07326 short chain dehydroge 98.6 8.6E-07 2.2E-11 64.6 11.0 82 2-93 5-92 (235)
39 PRK08277 D-mannonate oxidoredu 98.6 8.3E-07 2.1E-11 64.7 10.9 82 2-91 10-97 (278)
40 TIGR03206 benzo_BadH 2-hydroxy 98.6 9.7E-07 2.5E-11 64.3 11.2 84 2-93 3-92 (250)
41 PRK05867 short chain dehydroge 98.6 8.4E-07 2.1E-11 64.7 10.8 83 3-93 10-98 (253)
42 PRK10206 putative dehydrogenas 98.6 4E-06 1E-10 60.1 14.1 148 1-177 1-152 (345)
43 TIGR01035 hemA glutamyl-tRNA r 98.6 2.9E-07 7.4E-12 67.8 8.2 99 2-113 185-294 (436)
44 TIGR02632 RhaD_aldol-ADH rhamn 98.6 4.7E-07 1.2E-11 66.4 9.3 87 2-94 424-528 (709)
45 PRK13303 L-aspartate dehydroge 98.6 1.7E-06 4.2E-11 62.7 11.9 143 3-179 2-145 (265)
46 PRK06139 short chain dehydroge 98.6 8.8E-07 2.3E-11 64.5 10.5 83 2-92 6-94 (324)
47 PRK05993 short chain dehydroge 98.6 1.7E-06 4.2E-11 62.7 11.9 82 1-96 3-91 (277)
48 pfam05368 NmrA NmrA-like famil 98.6 8E-07 2.1E-11 64.8 10.3 92 5-110 1-99 (232)
49 PRK07201 short chain dehydroge 98.6 1.1E-06 2.8E-11 63.9 10.9 102 4-114 2-128 (663)
50 PRK08762 molybdopterin biosynt 98.6 1.8E-06 4.7E-11 62.4 12.0 104 2-113 138-261 (379)
51 PRK08223 hypothetical protein; 98.6 2.1E-06 5.3E-11 62.0 12.3 103 2-113 27-152 (287)
52 PRK12826 3-ketoacyl-(acyl-carr 98.6 1.5E-06 3.9E-11 62.9 11.6 84 2-93 6-95 (253)
53 PRK12939 short chain dehydroge 98.6 1.3E-06 3.2E-11 63.5 11.0 83 3-93 8-96 (250)
54 PRK09186 flagellin modificatio 98.6 1.3E-06 3.2E-11 63.5 11.0 96 2-112 4-105 (255)
55 PRK07774 short chain dehydroge 98.6 1.3E-06 3.2E-11 63.5 11.0 84 2-93 6-95 (250)
56 PRK07666 fabG 3-ketoacyl-(acyl 98.6 1.4E-06 3.5E-11 63.3 11.2 82 3-92 7-94 (238)
57 PRK07109 short chain dehydroge 98.6 1.3E-06 3.4E-11 63.3 11.0 84 2-93 8-97 (338)
58 PRK05875 short chain dehydroge 98.6 1.4E-06 3.5E-11 63.2 11.0 86 2-92 7-98 (277)
59 PRK07102 short chain dehydroge 98.6 8.7E-07 2.2E-11 64.6 9.9 84 1-92 1-87 (243)
60 PRK12824 acetoacetyl-CoA reduc 98.6 1.5E-06 3.9E-11 63.0 11.0 87 1-94 1-93 (245)
61 PRK08267 short chain dehydroge 98.6 1.4E-06 3.7E-11 63.1 10.9 82 3-94 2-90 (258)
62 PRK08324 short chain dehydroge 98.6 1.4E-06 3.6E-11 63.2 10.8 81 3-92 422-508 (676)
63 PRK07063 short chain dehydroge 98.5 1.7E-06 4.2E-11 62.7 11.1 84 3-93 8-97 (259)
64 PRK06125 short chain dehydroge 98.5 1.7E-06 4.3E-11 62.6 11.1 83 3-92 8-92 (259)
65 PRK12743 acetoin dehydrogenase 98.5 1.7E-06 4.2E-11 62.7 11.1 86 1-94 1-93 (253)
66 PRK07479 consensus 98.5 1.7E-06 4.3E-11 62.6 11.1 82 3-92 6-93 (252)
67 COG0373 HemA Glutamyl-tRNA red 98.5 1.7E-06 4.4E-11 62.6 11.1 93 2-113 178-275 (414)
68 PRK05690 molybdopterin biosynt 98.5 1.6E-06 4E-11 62.9 10.9 104 2-113 32-155 (245)
69 PRK07576 short chain dehydroge 98.5 1.9E-06 4.9E-11 62.3 11.3 84 2-93 8-97 (260)
70 cd00757 ThiF_MoeB_HesA_family 98.5 1.5E-06 3.8E-11 63.0 10.7 104 2-113 21-144 (228)
71 PRK06949 short chain dehydroge 98.5 1.9E-06 4.9E-11 62.3 11.3 83 3-93 10-98 (258)
72 PRK13394 3-hydroxybutyrate deh 98.5 1.8E-06 4.7E-11 62.4 11.2 83 3-93 8-96 (262)
73 PRK08217 fabG 3-ketoacyl-(acyl 98.5 1E-06 2.6E-11 64.1 9.9 84 2-93 5-94 (253)
74 PRK05650 short chain dehydroge 98.5 1.3E-06 3.3E-11 63.4 10.4 83 4-94 2-90 (270)
75 PRK05855 short chain dehydroge 98.5 1.5E-06 3.9E-11 62.9 10.7 82 3-92 316-403 (582)
76 PRK07814 short chain dehydroge 98.5 1.7E-06 4.3E-11 62.7 10.8 84 2-93 10-99 (263)
77 PRK07688 thiamine/molybdopteri 98.5 3.2E-06 8.2E-11 60.8 12.3 104 2-113 24-149 (339)
78 PRK08340 glucose-1-dehydrogena 98.5 1.8E-06 4.7E-11 62.4 11.0 80 4-92 2-87 (259)
79 PRK06194 hypothetical protein; 98.5 1.6E-06 4.1E-11 62.8 10.6 82 3-92 7-94 (301)
80 pfam01488 Shikimate_DH Shikima 98.5 8.2E-07 2.1E-11 64.8 9.0 95 2-113 12-109 (134)
81 PRK08213 gluconate 5-dehydroge 98.5 1.7E-06 4.3E-11 62.7 10.5 83 3-93 13-101 (259)
82 PRK12429 3-hydroxybutyrate deh 98.5 2.3E-06 5.8E-11 61.8 11.2 84 2-93 4-93 (258)
83 PRK07890 short chain dehydroge 98.5 2.2E-06 5.7E-11 61.8 11.1 82 2-91 5-92 (258)
84 PRK07231 fabG 3-ketoacyl-(acyl 98.5 2E-06 5E-11 62.2 10.8 80 3-92 7-92 (250)
85 PRK07478 short chain dehydroge 98.5 2.2E-06 5.7E-11 61.8 11.0 82 3-92 7-94 (254)
86 PRK00045 hemA glutamyl-tRNA re 98.5 2.2E-06 5.5E-11 61.9 10.9 93 2-113 182-281 (429)
87 PRK07825 short chain dehydroge 98.5 2.2E-06 5.7E-11 61.8 10.9 79 2-92 5-89 (273)
88 PRK12548 shikimate 5-dehydroge 98.5 3.4E-06 8.8E-11 60.6 11.8 135 2-166 126-269 (289)
89 PRK07067 sorbitol dehydrogenas 98.5 2.5E-06 6.4E-11 61.5 11.0 80 3-93 6-91 (256)
90 PRK09291 short chain dehydroge 98.5 2.3E-06 6E-11 61.7 10.9 88 1-97 1-89 (257)
91 PRK12475 thiamine/molybdopteri 98.5 3.9E-06 9.8E-11 60.2 12.0 104 2-113 24-149 (337)
92 PRK06124 gluconate 5-dehydroge 98.5 2.9E-06 7.3E-11 61.1 11.3 84 2-93 14-103 (259)
93 PRK07677 short chain dehydroge 98.5 2.8E-06 7.2E-11 61.1 11.3 83 3-93 4-92 (254)
94 PRK06914 short chain dehydroge 98.5 2.1E-06 5.3E-11 62.1 10.5 88 1-94 1-94 (280)
95 PRK06346 consensus 98.5 2.5E-06 6.4E-11 61.5 10.9 82 3-92 6-93 (251)
96 PRK06138 short chain dehydroge 98.5 2.3E-06 5.8E-11 61.8 10.7 82 3-93 6-93 (252)
97 PRK08085 gluconate 5-dehydroge 98.5 2.4E-06 6.1E-11 61.6 10.7 82 3-92 10-97 (254)
98 PRK07523 gluconate 5-dehydroge 98.5 2.7E-06 6.9E-11 61.2 11.0 80 3-93 10-95 (251)
99 COG1712 Predicted dinucleotide 98.5 6.4E-06 1.6E-10 58.7 12.9 141 4-177 2-142 (255)
100 PRK06200 2,3-dihydroxy-2,3-dih 98.5 2.3E-06 6E-11 61.7 10.6 79 3-92 7-91 (263)
101 TIGR00507 aroE shikimate 5-deh 98.5 1.4E-06 3.6E-11 63.2 9.4 132 2-166 121-261 (286)
102 COG4221 Short-chain alcohol de 98.5 2.1E-06 5.2E-11 62.1 10.2 90 3-102 7-102 (246)
103 PRK08017 short chain dehydroge 98.5 3.2E-06 8.2E-11 60.8 11.2 79 1-93 1-86 (256)
104 PRK06113 7-alpha-hydroxysteroi 98.5 3E-06 7.6E-11 61.0 11.0 81 3-91 12-98 (255)
105 PRK10538 3-hydroxy acid dehydr 98.5 2.7E-06 6.9E-11 61.2 10.8 78 4-92 2-85 (248)
106 PRK06180 short chain dehydroge 98.5 3.3E-06 8.5E-11 60.6 11.0 81 2-93 4-90 (277)
107 cd05213 NAD_bind_Glutamyl_tRNA 98.5 3.1E-06 7.8E-11 60.9 10.8 93 2-113 178-274 (311)
108 PRK06172 short chain dehydroge 98.5 3.4E-06 8.6E-11 60.6 11.0 82 3-92 8-95 (253)
109 PRK05786 fabG 3-ketoacyl-(acyl 98.5 3.1E-06 7.8E-11 60.9 10.8 85 2-95 5-95 (238)
110 PRK09310 aroDE bifunctional 3- 98.5 8E-07 2E-11 64.9 7.8 77 31-114 4-88 (477)
111 PRK07035 short chain dehydroge 98.5 3.4E-06 8.6E-11 60.6 11.0 82 2-91 8-95 (252)
112 PRK07097 gluconate 5-dehydroge 98.5 4E-06 1E-10 60.1 11.4 85 2-94 10-100 (265)
113 PRK12829 short chain dehydroge 98.5 3.1E-06 8E-11 60.8 10.7 80 3-92 12-97 (264)
114 PRK12828 short chain dehydroge 98.5 3.7E-06 9.5E-11 60.3 11.0 81 3-93 8-94 (239)
115 PRK08219 short chain dehydroge 98.5 3.2E-06 8E-11 60.8 10.5 80 1-94 1-83 (226)
116 PRK12936 3-ketoacyl-(acyl-carr 98.5 3E-06 7.6E-11 61.0 10.4 81 2-93 6-92 (245)
117 PRK08265 short chain dehydroge 98.5 3.3E-06 8.5E-11 60.6 10.6 80 3-93 7-92 (261)
118 PRK06500 short chain dehydroge 98.5 4.3E-06 1.1E-10 59.9 11.1 79 3-92 7-91 (249)
119 PRK05854 short chain dehydroge 98.4 3.1E-06 7.9E-11 60.9 10.4 84 3-92 15-104 (314)
120 PRK06182 short chain dehydroge 98.4 5.3E-06 1.4E-10 59.3 11.4 79 1-93 1-86 (273)
121 PRK05600 thiamine biosynthesis 98.4 4.2E-06 1.1E-10 60.0 10.8 103 2-113 41-164 (370)
122 PRK06057 short chain dehydroge 98.4 3.8E-06 9.6E-11 60.3 10.5 76 3-91 8-89 (255)
123 TIGR01921 DAP-DH diaminopimela 98.4 3.9E-07 1E-11 66.9 5.4 148 1-179 1-149 (326)
124 PRK06720 hypothetical protein; 98.4 4E-06 1E-10 60.1 10.6 81 3-91 17-103 (169)
125 PRK05597 molybdopterin biosynt 98.4 5.2E-06 1.3E-10 59.3 11.0 104 2-113 28-151 (355)
126 PRK09242 tropinone reductase; 98.4 4.9E-06 1.2E-10 59.5 10.9 86 2-93 10-101 (258)
127 PRK07878 molybdopterin biosynt 98.4 4.6E-06 1.2E-10 59.7 10.7 104 2-113 42-165 (392)
128 PRK12550 shikimate 5-dehydroge 98.4 3.1E-06 7.9E-11 60.9 9.8 121 2-166 122-249 (272)
129 PRK08339 short chain dehydroge 98.4 6.5E-06 1.7E-10 58.7 11.4 83 3-92 9-96 (263)
130 PRK06196 oxidoreductase; Provi 98.4 4.4E-06 1.1E-10 59.9 10.4 78 3-92 27-110 (316)
131 PRK07041 short chain dehydroge 98.4 6.1E-06 1.5E-10 58.9 10.9 83 2-93 7-91 (240)
132 PRK05876 short chain dehydroge 98.4 5.1E-06 1.3E-10 59.4 10.4 82 3-92 7-94 (275)
133 PRK05717 oxidoreductase; Valid 98.4 6.2E-06 1.6E-10 58.8 10.8 79 3-92 11-95 (255)
134 PRK05693 short chain dehydroge 98.4 8.4E-06 2.1E-10 58.0 11.4 86 3-102 2-93 (274)
135 PRK06483 short chain dehydroge 98.4 6.5E-06 1.7E-10 58.7 10.8 80 1-93 1-86 (236)
136 PRK06197 short chain dehydroge 98.4 5.1E-06 1.3E-10 59.4 10.2 86 2-93 16-107 (306)
137 PRK06227 consensus 98.4 7.9E-06 2E-10 58.1 11.2 83 3-93 6-94 (256)
138 PRK07074 short chain dehydroge 98.4 7.6E-06 1.9E-10 58.2 11.1 83 2-94 2-89 (256)
139 PRK08644 thiamine biosynthesis 98.4 1.3E-05 3.3E-10 56.7 12.2 103 2-112 27-149 (209)
140 PRK07707 consensus 98.4 5.9E-06 1.5E-10 59.0 10.5 83 1-93 1-87 (239)
141 cd01492 Aos1_SUMO Ubiquitin ac 98.4 1.2E-05 3.1E-10 56.9 12.0 103 2-113 21-143 (197)
142 TIGR01850 argC N-acetyl-gamma- 98.4 2.5E-06 6.3E-11 61.5 8.5 198 3-217 1-222 (361)
143 PRK12825 fabG 3-ketoacyl-(acyl 98.4 8.7E-06 2.2E-10 57.9 11.2 83 3-93 8-97 (250)
144 PRK08862 short chain dehydroge 98.4 8.3E-06 2.1E-10 58.0 11.0 81 3-91 6-93 (227)
145 PRK06198 short chain dehydroge 98.4 1E-05 2.5E-10 57.4 11.3 84 3-93 7-96 (268)
146 PRK07411 hypothetical protein; 98.4 5.6E-06 1.4E-10 59.1 10.0 104 2-113 38-161 (390)
147 PRK05599 hypothetical protein; 98.4 5.9E-06 1.5E-10 59.0 10.0 81 4-92 2-88 (246)
148 PRK09134 short chain dehydroge 98.4 6.8E-06 1.7E-10 58.6 10.3 84 2-93 9-99 (256)
149 PRK08328 hypothetical protein; 98.4 4E-06 1E-10 60.1 9.1 104 2-113 27-151 (230)
150 PRK08063 enoyl-(acyl carrier p 98.4 1E-05 2.5E-10 57.4 11.1 83 3-93 5-94 (250)
151 PRK07831 short chain dehydroge 98.4 9.7E-06 2.5E-10 57.5 11.0 86 2-93 16-108 (261)
152 PRK06841 short chain dehydroge 98.4 9.3E-06 2.4E-10 57.6 10.9 80 3-93 16-101 (255)
153 cd01078 NAD_bind_H4MPT_DH NADP 98.4 4.8E-06 1.2E-10 59.6 9.4 99 2-113 28-130 (194)
154 TIGR03325 BphB_TodD cis-2,3-di 98.4 7.9E-06 2E-10 58.1 10.5 79 2-91 5-89 (262)
155 PRK12749 quinate/shikimate deh 98.3 1E-05 2.6E-10 57.4 11.0 134 2-166 124-266 (288)
156 PRK11908 NAD-dependent epimera 98.3 6.3E-06 1.6E-10 58.8 9.8 98 1-113 1-118 (347)
157 PRK06484 short chain dehydroge 98.3 1E-05 2.7E-10 57.3 10.8 79 2-91 5-89 (530)
158 PRK07776 consensus 98.3 1E-05 2.6E-10 57.3 10.8 80 2-91 8-93 (252)
159 cd01485 E1-1_like Ubiquitin ac 98.3 8.9E-05 2.3E-09 51.0 15.5 105 2-113 19-146 (198)
160 TIGR03466 HpnA hopanoid-associ 98.3 8.6E-06 2.2E-10 57.9 10.2 93 4-112 2-112 (328)
161 PRK08226 short chain dehydroge 98.3 1.2E-05 3.1E-10 56.9 10.9 81 3-92 7-93 (263)
162 PRK08945 short chain dehydroge 98.3 1.1E-05 2.9E-10 57.1 10.7 84 2-92 13-104 (245)
163 PRK06484 short chain dehydroge 98.3 1.2E-05 3E-10 57.0 10.7 79 3-92 275-359 (530)
164 cd01487 E1_ThiF_like E1_ThiF_l 98.3 2.9E-05 7.3E-10 54.3 12.6 101 4-113 1-122 (174)
165 PRK06101 short chain dehydroge 98.3 1.1E-05 2.8E-10 57.2 10.5 78 1-91 1-81 (241)
166 PRK07453 protochlorophyllide o 98.3 1.3E-05 3.3E-10 56.7 10.7 83 2-92 6-94 (322)
167 PRK05565 fabG 3-ketoacyl-(acyl 98.3 1.6E-05 4.1E-10 56.1 11.2 84 2-93 5-95 (247)
168 PRK07060 short chain dehydroge 98.3 1E-05 2.7E-10 57.3 10.3 78 3-93 10-89 (245)
169 pfam00899 ThiF ThiF family. Th 98.3 1.3E-05 3.3E-10 56.7 10.6 104 2-113 1-124 (134)
170 PRK08589 short chain dehydroge 98.3 1.5E-05 3.8E-10 56.3 10.8 80 3-91 7-92 (272)
171 PRK05557 fabG 3-ketoacyl-(acyl 98.3 1.6E-05 4.1E-10 56.1 10.9 84 3-93 6-95 (248)
172 PRK13940 glutamyl-tRNA reducta 98.3 1.1E-05 2.8E-10 57.2 9.9 73 2-92 181-253 (414)
173 PRK09135 pteridine reductase; 98.3 1.9E-05 4.9E-10 55.5 11.0 86 2-94 6-98 (249)
174 TIGR01181 dTDP_gluc_dehyt dTDP 98.3 4.7E-06 1.2E-10 59.7 7.8 81 4-90 1-82 (340)
175 cd01483 E1_enzyme_family Super 98.3 2.7E-05 6.8E-10 54.6 11.7 103 4-114 1-123 (143)
176 PRK12746 short chain dehydroge 98.3 2E-05 5.2E-10 55.3 11.0 83 3-93 7-102 (254)
177 PRK06123 short chain dehydroge 98.3 2.3E-05 5.9E-10 55.0 11.2 85 1-93 2-93 (249)
178 PRK06947 glucose-1-dehydrogena 98.3 2E-05 5.1E-10 55.4 10.8 83 2-92 6-95 (252)
179 cd00755 YgdL_like Family of ac 98.3 1.2E-05 3.1E-10 56.9 9.6 126 2-152 11-137 (231)
180 PRK10217 dTDP-glucose 4,6-dehy 98.3 5.6E-06 1.4E-10 59.2 7.9 81 1-91 1-84 (355)
181 KOG1205 consensus 98.3 1.3E-05 3.2E-10 56.7 9.7 86 2-93 12-103 (282)
182 PRK10675 UDP-galactose-4-epime 98.3 3.3E-05 8.3E-10 54.0 11.8 102 4-112 2-123 (338)
183 PRK08177 short chain dehydroge 98.3 1.4E-05 3.7E-10 56.3 10.0 78 2-92 1-82 (225)
184 PRK07806 short chain dehydroge 98.3 2.1E-05 5.3E-10 55.3 10.8 81 3-91 7-94 (248)
185 PRK06114 short chain dehydroge 98.2 2.7E-05 6.9E-10 54.5 11.2 84 2-93 16-106 (262)
186 PRK08278 short chain dehydroge 98.2 3.2E-05 8.2E-10 54.0 11.5 83 3-93 7-102 (273)
187 PRK12827 short chain dehydroge 98.2 1.1E-05 2.9E-10 57.1 9.2 87 3-93 7-99 (251)
188 PRK06179 short chain dehydroge 98.2 1.1E-05 2.9E-10 57.0 9.2 76 2-93 4-85 (270)
189 PRK12745 3-ketoacyl-(acyl-carr 98.2 2.7E-05 6.8E-10 54.5 11.0 83 2-92 5-94 (259)
190 PRK12935 acetoacetyl-CoA reduc 98.2 2.6E-05 6.6E-10 54.7 10.8 83 3-93 7-96 (247)
191 PRK10084 dTDP-glucose 4,6 dehy 98.2 1.8E-05 4.5E-10 55.8 9.9 79 4-91 2-83 (352)
192 pfam03446 NAD_binding_2 NAD bi 98.2 1.5E-05 3.8E-10 56.2 9.5 119 3-157 2-127 (163)
193 pfam00106 adh_short short chai 98.2 3.3E-05 8.4E-10 53.9 11.1 84 3-93 1-92 (167)
194 PRK08416 7-alpha-hydroxysteroi 98.2 2.9E-05 7.3E-10 54.3 10.5 83 3-92 9-98 (260)
195 pfam02719 Polysacc_synt_2 Poly 98.2 2.1E-05 5.5E-10 55.2 9.8 82 5-91 1-83 (280)
196 COG0569 TrkA K+ transport syst 98.2 7E-05 1.8E-09 51.7 12.4 99 3-116 1-103 (225)
197 pfam01370 Epimerase NAD depend 98.2 4E-05 1E-09 53.4 11.1 75 5-92 1-76 (235)
198 TIGR03589 PseB UDP-N-acetylglu 98.2 1.4E-05 3.7E-10 56.3 8.8 102 2-113 4-125 (324)
199 KOG1208 consensus 98.2 3.2E-05 8.2E-10 54.0 10.5 87 3-95 36-128 (314)
200 PRK08220 2,3-dihydroxybenzoate 98.2 2.4E-05 6.2E-10 54.8 9.8 75 3-93 9-89 (253)
201 PRK12744 short chain dehydroge 98.2 1.9E-05 4.9E-10 55.5 9.2 83 3-93 9-101 (257)
202 pfam08659 KR KR domain. This e 98.2 2.1E-05 5.4E-10 55.2 9.2 87 4-94 2-94 (181)
203 COG0002 ArgC Acetylglutamate s 98.2 1.3E-05 3.4E-10 56.6 8.2 151 1-165 1-166 (349)
204 PRK08936 glucose-1-dehydrogena 98.2 4.9E-05 1.2E-09 52.8 11.0 83 3-93 8-97 (261)
205 PRK11863 N-acetyl-gamma-glutam 98.1 2.4E-05 6.1E-10 54.9 9.3 123 1-160 1-127 (314)
206 PRK08703 short chain dehydroge 98.1 5.1E-05 1.3E-09 52.7 10.9 85 2-93 6-99 (239)
207 PRK12823 benD 1,6-dihydroxycyc 98.1 4.5E-05 1.1E-09 53.0 10.6 81 3-92 9-95 (260)
208 PRK11559 garR tartronate semia 98.1 4.1E-05 1E-09 53.3 10.2 119 3-157 2-127 (295)
209 PRK11880 pyrroline-5-carboxyla 98.1 2.5E-05 6.3E-10 54.8 9.1 93 1-112 1-94 (267)
210 PRK08374 homoserine dehydrogen 98.1 9.3E-05 2.4E-09 50.9 11.9 155 1-177 1-168 (316)
211 cd01489 Uba2_SUMO Ubiquitin ac 98.1 4.7E-05 1.2E-09 52.9 10.3 103 4-113 1-123 (312)
212 PRK07791 short chain dehydroge 98.1 5.7E-05 1.5E-09 52.3 10.7 82 3-92 7-103 (285)
213 TIGR02853 spore_dpaA dipicolin 98.1 1.2E-05 3.1E-10 56.9 7.2 122 3-164 153-274 (288)
214 cd01484 E1-2_like Ubiquitin ac 98.1 5E-05 1.3E-09 52.7 10.4 39 4-44 1-39 (234)
215 PRK07889 enoyl-(acyl carrier p 98.1 4.6E-05 1.2E-09 52.9 10.2 79 3-92 8-95 (256)
216 PRK12859 3-ketoacyl-(acyl-carr 98.1 5.5E-05 1.4E-09 52.4 10.5 84 3-94 7-109 (257)
217 PRK06935 2-deoxy-D-gluconate 3 98.1 4.7E-05 1.2E-09 52.9 10.0 82 3-93 16-103 (258)
218 PRK06077 fabG 3-ketoacyl-(acyl 98.1 6E-05 1.5E-09 52.2 10.4 83 3-93 4-93 (249)
219 TIGR01214 rmlD dTDP-4-dehydror 98.1 9.5E-06 2.4E-10 57.6 6.3 70 4-92 1-71 (317)
220 PRK12937 short chain dehydroge 98.1 7.5E-05 1.9E-09 51.5 10.9 84 2-93 5-95 (245)
221 PRK00048 dihydrodipicolinate r 98.1 4.8E-05 1.2E-09 52.8 9.7 139 1-166 1-143 (265)
222 PRK08306 dipicolinate synthase 98.1 0.00015 3.7E-09 49.5 11.9 37 4-43 154-190 (296)
223 PRK08628 short chain dehydroge 98.1 6.2E-05 1.6E-09 52.1 10.0 81 3-92 8-94 (258)
224 TIGR01963 PHB_DH 3-hydroxybuty 98.1 7.7E-05 2E-09 51.5 10.3 85 2-94 1-93 (258)
225 PRK06349 homoserine dehydrogen 98.1 1.5E-05 3.8E-10 56.2 6.7 144 1-175 1-155 (432)
226 PRK08664 aspartate-semialdehyd 98.0 0.00023 6E-09 48.2 12.8 104 1-116 1-111 (350)
227 PRK09496 trkA potassium transp 98.0 0.00021 5.4E-09 48.5 12.4 92 4-109 2-95 (455)
228 COG1091 RfbD dTDP-4-dehydrorha 98.0 4.6E-05 1.2E-09 53.0 8.9 82 1-114 1-101 (281)
229 KOG1502 consensus 98.0 0.00013 3.3E-09 49.9 11.1 102 1-112 5-128 (327)
230 KOG1014 consensus 98.0 5.8E-05 1.5E-09 52.3 9.3 86 3-95 50-140 (312)
231 PRK06701 short chain dehydroge 98.0 0.0001 2.6E-09 50.6 10.5 83 3-93 46-135 (289)
232 COG3804 Uncharacterized conser 98.0 0.00013 3.3E-09 49.9 11.0 158 1-179 1-160 (350)
233 PRK06463 fabG 3-ketoacyl-(acyl 98.0 0.0001 2.6E-09 50.6 10.5 78 3-93 8-91 (254)
234 PRK08415 enoyl-(acyl carrier p 98.0 0.00012 3.1E-09 50.1 10.8 80 3-91 6-93 (274)
235 PRK08291 ornithine cyclodeamin 98.0 0.00016 4E-09 49.3 11.3 103 3-121 133-236 (330)
236 pfam03447 NAD_binding_3 Homose 98.0 4.2E-05 1.1E-09 53.2 8.3 113 9-147 1-115 (116)
237 PTZ00142 6-phosphogluconate de 98.0 0.00028 7.1E-09 47.7 12.4 107 2-113 5-131 (474)
238 KOG1201 consensus 98.0 7.4E-05 1.9E-09 51.5 9.4 92 2-113 38-135 (300)
239 PRK09496 trkA potassium transp 98.0 6.4E-05 1.6E-09 52.0 9.1 76 3-92 233-308 (455)
240 PRK09730 hypothetical protein; 98.0 0.00011 2.9E-09 50.3 10.4 83 3-93 2-91 (247)
241 PRK06171 sorbitol-6-phosphate 98.0 5.8E-05 1.5E-09 52.3 8.8 73 3-92 10-88 (266)
242 PRK07589 ornithine cyclodeamin 98.0 0.00022 5.7E-09 48.3 11.8 103 3-120 130-233 (346)
243 PRK06505 enoyl-(acyl carrier p 98.0 0.00017 4.4E-09 49.0 10.8 81 3-92 8-96 (271)
244 PRK06128 oxidoreductase; Provi 98.0 0.00012 3E-09 50.2 9.9 82 3-92 56-145 (300)
245 pfam04321 RmlD_sub_bind RmlD s 98.0 0.00013 3.4E-09 49.8 10.1 58 5-91 1-59 (284)
246 PRK09987 dTDP-4-dehydrorhamnos 98.0 0.00013 3.2E-09 50.0 10.0 86 4-115 2-106 (299)
247 pfam02423 OCD_Mu_crystall Orni 98.0 0.00019 4.8E-09 48.8 10.8 103 3-121 130-233 (312)
248 PRK08642 fabG 3-ketoacyl-(acyl 98.0 0.00015 3.9E-09 49.4 10.3 80 2-92 6-93 (254)
249 PRK07904 short chain dehydroge 97.9 0.00015 3.7E-09 49.6 10.2 85 2-92 8-98 (253)
250 PRK12491 pyrroline-5-carboxyla 97.9 8.2E-05 2.1E-09 51.2 8.9 94 1-113 1-98 (272)
251 PRK08618 ornithine cyclodeamin 97.9 0.00015 3.8E-09 49.5 10.2 102 3-120 128-229 (325)
252 pfam01073 3Beta_HSD 3-beta hyd 97.9 9.8E-05 2.5E-09 50.7 9.2 76 6-92 1-77 (280)
253 PRK08264 short chain dehydroge 97.9 8.9E-05 2.3E-09 51.0 8.9 75 2-92 5-81 (235)
254 PRK12748 3-ketoacyl-(acyl-carr 97.9 0.0002 5.1E-09 48.6 10.7 86 1-94 4-108 (257)
255 PRK07792 fabG 3-ketoacyl-(acyl 97.9 0.00019 4.8E-09 48.8 10.4 82 3-92 10-97 (303)
256 PRK06079 enoyl-(acyl carrier p 97.9 0.00018 4.6E-09 49.0 10.3 79 3-92 8-94 (252)
257 PRK06270 homoserine dehydrogen 97.9 0.00011 2.8E-09 50.4 9.3 153 1-177 1-178 (342)
258 PRK12938 acetyacetyl-CoA reduc 97.9 0.00019 4.9E-09 48.7 10.3 85 1-93 1-93 (246)
259 PRK06598 aspartate-semialdehyd 97.9 0.00029 7.4E-09 47.5 11.2 126 1-150 1-131 (348)
260 KOG1200 consensus 97.9 8.5E-05 2.2E-09 51.1 8.5 86 1-95 13-104 (256)
261 smart00822 PKS_KR This enzymat 97.9 0.00022 5.6E-09 48.3 10.4 83 4-93 2-93 (180)
262 PRK08159 enoyl-(acyl carrier p 97.9 0.00024 6.2E-09 48.0 10.6 82 3-93 11-100 (272)
263 PRK07856 short chain dehydroge 97.9 0.00013 3.3E-09 49.9 9.2 75 2-93 8-88 (254)
264 PRK08594 enoyl-(acyl carrier p 97.9 0.00022 5.6E-09 48.4 10.2 83 2-91 6-96 (256)
265 COG2084 MmsB 3-hydroxyisobutyr 97.9 0.00023 5.9E-09 48.2 10.3 119 3-156 1-126 (286)
266 pfam01210 NAD_Gly3P_dh_N NAD-d 97.9 8.8E-05 2.2E-09 51.0 8.1 101 3-112 1-104 (159)
267 PRK08655 prephenate dehydrogen 97.9 9.4E-05 2.4E-09 50.8 8.2 89 4-114 2-94 (441)
268 PRK07985 oxidoreductase; Provi 97.9 0.00026 6.7E-09 47.8 10.5 83 3-93 50-140 (294)
269 PRK05884 short chain dehydroge 97.9 0.00018 4.5E-09 49.0 9.6 75 4-91 2-79 (223)
270 PRK06199 ornithine cyclodeamin 97.9 0.00038 9.6E-09 46.8 11.2 100 3-113 156-260 (379)
271 PRK07533 enoyl-(acyl carrier p 97.9 0.00026 6.7E-09 47.8 10.4 79 3-90 7-93 (254)
272 COG2423 Predicted ornithine cy 97.9 0.00028 7.1E-09 47.7 10.5 103 3-120 131-233 (330)
273 PRK08303 short chain dehydroge 97.9 0.00025 6.5E-09 47.9 10.3 79 3-89 9-103 (305)
274 TIGR01289 LPOR light-dependent 97.9 9E-05 2.3E-09 51.0 8.0 85 1-92 2-93 (321)
275 PRK06953 short chain dehydroge 97.9 0.00021 5.2E-09 48.6 9.8 76 3-92 2-81 (222)
276 PRK08057 cobalt-precorrin-6x r 97.9 0.001 2.6E-08 43.8 13.3 93 3-113 2-97 (241)
277 PRK06398 aldose dehydrogenase; 97.9 0.00013 3.3E-09 49.9 8.5 72 3-92 7-84 (256)
278 PRK07069 short chain dehydroge 97.9 0.00028 7.2E-09 47.6 10.3 83 4-92 1-90 (251)
279 KOG2741 consensus 97.8 0.0016 4E-08 42.6 14.0 148 4-176 8-158 (351)
280 PRK12481 2-deoxy-D-gluconate 3 97.8 0.00034 8.6E-09 47.1 10.5 81 2-93 8-95 (251)
281 PRK07984 enoyl-(acyl carrier p 97.8 0.00036 9.1E-09 46.9 10.6 80 3-91 7-94 (262)
282 COG4091 Predicted homoserine d 97.8 0.00083 2.1E-08 44.5 12.4 140 4-164 19-174 (438)
283 KOG0725 consensus 97.8 0.00037 9.5E-09 46.8 10.4 88 2-94 8-102 (270)
284 PRK07578 short chain dehydroge 97.8 0.00012 3E-09 50.2 7.5 64 4-93 2-67 (199)
285 COG2099 CobK Precorrin-6x redu 97.8 0.00056 1.4E-08 45.6 11.0 98 1-113 1-101 (257)
286 TIGR01830 3oxo_ACP_reduc 3-oxo 97.8 0.00024 6.1E-09 48.1 9.1 142 5-190 1-149 (238)
287 PRK12490 6-phosphogluconate de 97.8 0.00091 2.3E-08 44.2 12.0 121 4-157 2-126 (298)
288 TIGR01179 galE UDP-glucose 4-e 97.8 0.00015 3.7E-09 49.6 8.0 101 4-112 1-125 (341)
289 PRK06407 ornithine cyclodeamin 97.8 0.0002 5.1E-09 48.6 8.6 103 3-121 119-222 (302)
290 PRK08993 2-deoxy-D-gluconate 3 97.8 0.0002 5E-09 48.7 8.6 82 2-93 10-97 (253)
291 PRK07370 enoyl-(acyl carrier p 97.8 0.0004 1E-08 46.6 10.0 82 2-91 7-98 (259)
292 pfam02254 TrkA_N TrkA-N domain 97.8 0.001 2.6E-08 43.9 12.0 110 5-147 1-113 (115)
293 PRK06523 short chain dehydroge 97.8 0.00026 6.6E-09 47.9 9.0 73 2-91 9-87 (260)
294 TIGR01829 AcAcCoA_reduct aceto 97.8 0.0002 5E-09 48.7 8.3 84 3-92 1-90 (244)
295 pfam02571 CbiJ Precorrin-6x re 97.8 0.002 5E-08 41.9 13.5 96 3-113 1-99 (246)
296 PRK07340 ornithine cyclodeamin 97.8 0.00027 6.8E-09 47.8 8.9 101 3-121 126-226 (304)
297 pfam01262 AlaDh_PNT_C Alanine 97.7 0.00066 1.7E-08 45.1 10.7 98 3-116 21-125 (150)
298 PRK00066 ldh L-lactate dehydro 97.7 0.00016 4E-09 49.4 7.5 80 2-93 6-85 (315)
299 PRK06046 alanine dehydrogenase 97.7 0.0004 1E-08 46.6 9.5 101 3-120 130-231 (326)
300 TIGR00036 dapB dihydrodipicoli 97.7 0.00082 2.1E-08 44.5 11.0 176 4-201 3-186 (281)
301 TIGR02415 23BDH acetoin reduct 97.7 0.00038 9.8E-09 46.7 9.3 155 3-177 1-181 (258)
302 PRK12747 short chain dehydroge 97.7 0.0007 1.8E-08 45.0 10.6 82 3-92 5-99 (252)
303 KOG0409 consensus 97.7 0.00035 8.8E-09 47.0 9.1 93 2-117 35-135 (327)
304 PRK05447 1-deoxy-D-xylulose 5- 97.7 0.0025 6.3E-08 41.3 13.4 157 3-177 2-168 (379)
305 cd05293 LDH_1 A subgroup of L- 97.7 0.00015 3.9E-09 49.5 7.2 80 2-92 3-82 (312)
306 COG0743 Dxr 1-deoxy-D-xylulose 97.7 0.00034 8.6E-09 47.1 8.8 142 2-157 1-151 (385)
307 PRK06141 ornithine cyclodeamin 97.7 0.00036 9.2E-09 46.9 8.9 102 3-121 126-228 (313)
308 COG1088 RfbB dTDP-D-glucose 4, 97.7 0.0002 5.2E-09 48.6 7.6 82 3-90 1-83 (340)
309 PRK00094 gpsA NAD(P)H-dependen 97.7 0.0005 1.3E-08 45.9 9.6 98 3-112 2-105 (325)
310 TIGR03649 ergot_EASG ergot alk 97.7 0.00044 1.1E-08 46.3 9.3 93 4-113 1-105 (285)
311 PRK12742 oxidoreductase; Provi 97.7 0.0008 2E-08 44.6 10.5 78 3-93 7-87 (237)
312 PRK09599 6-phosphogluconate de 97.7 0.0019 4.7E-08 42.1 12.4 121 4-157 2-126 (301)
313 COG2910 Putative NADH-flavin r 97.7 0.00014 3.5E-09 49.7 6.5 73 3-93 1-74 (211)
314 PRK06550 fabG 3-ketoacyl-(acyl 97.7 0.00039 9.9E-09 46.7 8.8 74 1-92 4-79 (237)
315 pfam01118 Semialdhyde_dh Semia 97.7 0.00012 3.1E-09 50.1 6.1 99 4-115 1-100 (121)
316 PRK08261 fabG 3-ketoacyl-(acyl 97.7 0.00087 2.2E-08 44.3 10.4 22 4-25 42-63 (447)
317 PRK06813 homoserine dehydrogen 97.7 0.00061 1.5E-08 45.4 9.5 157 1-176 1-174 (341)
318 PRK06924 short chain dehydroge 97.6 0.00081 2.1E-08 44.5 10.0 79 3-91 2-90 (251)
319 PRK06997 enoyl-(acyl carrier p 97.6 0.0011 2.7E-08 43.8 10.5 77 3-91 7-94 (260)
320 PRK06928 pyrroline-5-carboxyla 97.6 0.00068 1.7E-08 45.1 9.3 93 1-113 1-98 (275)
321 PRK07634 pyrroline-5-carboxyla 97.6 0.00042 1.1E-08 46.4 8.3 80 2-100 4-85 (245)
322 KOG1371 consensus 97.6 0.0011 2.9E-08 43.6 10.4 82 1-91 1-87 (343)
323 COG1179 Dinucleotide-utilizing 97.6 0.00039 9.8E-09 46.7 8.0 96 2-109 30-125 (263)
324 COG3967 DltE Short-chain dehyd 97.6 0.00045 1.2E-08 46.2 8.4 80 4-95 7-92 (245)
325 PTZ00117 malate dehydrogenase; 97.6 0.00018 4.6E-09 48.9 6.3 80 1-92 1-80 (313)
326 cd05290 LDH_3 A subgroup of L- 97.6 0.00015 3.9E-09 49.5 5.8 79 4-92 1-79 (307)
327 COG0460 ThrA Homoserine dehydr 97.6 0.0014 3.6E-08 42.9 10.8 149 1-175 2-164 (333)
328 cd05291 HicDH_like L-2-hydroxy 97.6 0.00029 7.3E-09 47.6 7.2 79 3-92 1-79 (306)
329 TIGR03451 mycoS_dep_FDH mycoth 97.6 0.0021 5.4E-08 41.7 11.6 37 4-42 179-215 (358)
330 PRK09260 3-hydroxybutyryl-CoA 97.6 0.0001 2.6E-09 50.6 4.9 47 1-50 1-47 (289)
331 PRK06823 ornithine cyclodeamin 97.6 0.00094 2.4E-08 44.1 9.8 102 3-121 129-231 (315)
332 PRK09009 C factor cell-cell si 97.6 0.00075 1.9E-08 44.7 9.2 75 4-92 2-78 (235)
333 COG0289 DapB Dihydrodipicolina 97.6 0.0016 4.2E-08 42.5 10.8 142 1-169 1-145 (266)
334 PRK06476 pyrroline-5-carboxyla 97.6 0.00072 1.8E-08 44.9 8.9 79 4-100 2-80 (255)
335 PRK00436 argC N-acetyl-gamma-g 97.6 0.0013 3.3E-08 43.1 10.2 141 1-155 1-156 (345)
336 pfam03807 F420_oxidored NADP o 97.6 0.00048 1.2E-08 46.0 7.9 89 4-112 1-91 (93)
337 PRK08690 enoyl-(acyl carrier p 97.6 0.00066 1.7E-08 45.1 8.5 77 3-91 7-94 (261)
338 pfam01113 DapB_N Dihydrodipico 97.6 0.00039 1E-08 46.7 7.3 116 4-146 2-119 (122)
339 cd05292 LDH_2 A subgroup of L- 97.5 0.0003 7.5E-09 47.5 6.5 77 4-92 2-78 (308)
340 KOG1198 consensus 97.5 0.0011 2.8E-08 43.6 9.4 99 2-116 158-261 (347)
341 PRK06392 homoserine dehydrogen 97.5 0.0015 3.8E-08 42.7 10.1 154 4-177 2-169 (326)
342 COG0345 ProC Pyrroline-5-carbo 97.5 0.0015 3.8E-08 42.8 10.0 92 3-113 2-96 (266)
343 PRK07502 cyclohexadienyl dehyd 97.5 0.0018 4.6E-08 42.2 10.4 94 1-113 5-101 (307)
344 PRK05396 tdh L-threonine 3-deh 97.5 0.002 5E-08 41.9 10.5 13 29-41 30-42 (341)
345 TIGR00715 precor6x_red precorr 97.5 0.00036 9.3E-09 46.9 6.7 97 4-113 2-102 (260)
346 PRK12428 3-alpha-hydroxysteroi 97.5 0.00058 1.5E-08 45.5 7.6 72 2-92 5-79 (261)
347 COG1028 FabG Dehydrogenases wi 97.5 0.0023 5.7E-08 41.5 10.5 87 1-94 4-99 (251)
348 PRK00141 murD UDP-N-acetylmura 97.5 0.0011 2.7E-08 43.8 8.8 89 1-109 16-104 (476)
349 COG0702 Predicted nucleoside-d 97.5 0.0014 3.5E-08 43.0 9.3 93 3-112 1-106 (275)
350 PTZ00082 L-lactate dehydrogena 97.5 0.00064 1.6E-08 45.2 7.6 79 2-91 7-85 (322)
351 cd01488 Uba3_RUB Ubiquitin act 97.5 0.0018 4.7E-08 42.1 9.8 39 4-44 1-39 (291)
352 KOG1209 consensus 97.5 0.00094 2.4E-08 44.1 8.2 85 2-99 7-99 (289)
353 PRK10309 galactitol-1-phosphat 97.5 0.0033 8.4E-08 40.4 10.9 39 361-401 300-342 (347)
354 KOG1478 consensus 97.4 0.001 2.6E-08 43.9 8.2 78 1-79 2-82 (341)
355 COG1064 AdhP Zn-dependent alco 97.4 0.0045 1.1E-07 39.5 11.4 93 3-113 168-260 (339)
356 PRK06603 enoyl-(acyl carrier p 97.4 0.0026 6.5E-08 41.1 10.1 81 3-92 9-97 (260)
357 PRK07577 short chain dehydroge 97.4 0.0015 3.9E-08 42.7 9.0 74 2-94 3-81 (234)
358 TIGR01915 npdG NADPH-dependent 97.4 0.0021 5.3E-08 41.8 9.6 151 4-165 2-162 (233)
359 PRK06130 3-hydroxybutyryl-CoA 97.4 0.00039 9.9E-09 46.7 5.6 45 3-50 6-50 (310)
360 COG1087 GalE UDP-glucose 4-epi 97.4 0.001 2.6E-08 43.8 7.7 96 4-112 2-116 (329)
361 PRK07680 late competence prote 97.4 0.0019 4.9E-08 42.0 9.0 92 4-113 2-97 (273)
362 TIGR03366 HpnZ_proposed putati 97.4 0.013 3.3E-07 36.4 14.7 136 3-163 122-258 (280)
363 PRK12439 NAD(P)H-dependent gly 97.4 0.0045 1.2E-07 39.5 10.7 98 2-112 6-110 (340)
364 COG0476 ThiF Dinucleotide-util 97.4 0.0027 7E-08 41.0 9.6 104 2-113 30-153 (254)
365 PRK06223 malate dehydrogenase; 97.4 0.0012 3E-08 43.4 7.7 79 4-92 2-80 (312)
366 KOG2018 consensus 97.4 0.0019 4.8E-08 42.1 8.7 101 4-115 76-200 (430)
367 TIGR01505 tartro_sem_red 2-hyd 97.3 0.0013 3.4E-08 43.1 7.8 89 4-116 1-97 (291)
368 PRK08293 3-hydroxybutyryl-CoA 97.3 0.00055 1.4E-08 45.7 5.8 45 2-49 3-47 (288)
369 PRK08125 bifunctional UDP-gluc 97.3 0.0023 5.9E-08 41.4 8.8 95 2-110 315-429 (660)
370 PRK07531 bifunctional 3-hydrox 97.3 0.0011 2.8E-08 43.6 7.1 88 1-94 1-91 (489)
371 PRK05671 aspartate-semialdehyd 97.3 0.0013 3.2E-08 43.2 7.1 96 1-115 1-100 (336)
372 TIGR03026 NDP-sugDHase nucleot 97.3 0.0062 1.6E-07 38.6 10.6 164 4-209 2-173 (411)
373 TIGR00872 gnd_rel 6-phosphoglu 97.3 0.0076 1.9E-07 37.9 11.0 108 4-116 3-125 (341)
374 PRK03369 murD UDP-N-acetylmura 97.3 0.0039 1E-07 39.9 9.4 87 2-109 12-98 (487)
375 PRK08229 2-dehydropantoate 2-r 97.2 0.0022 5.6E-08 41.6 8.1 92 1-102 1-94 (341)
376 PRK06395 phosphoribosylamine-- 97.2 0.0047 1.2E-07 39.4 9.7 95 1-113 1-97 (435)
377 TIGR02355 moeB molybdopterin s 97.2 0.0037 9.5E-08 40.1 9.1 107 3-113 25-147 (240)
378 PRK05472 redox-sensing transcr 97.2 0.003 7.6E-08 40.7 8.5 90 3-109 85-174 (211)
379 pfam00056 Ldh_1_N lactate/mala 97.2 0.0013 3.2E-08 43.2 6.5 79 4-93 2-81 (142)
380 COG1063 Tdh Threonine dehydrog 97.2 0.0057 1.4E-07 38.8 9.6 75 4-90 171-247 (350)
381 PRK13789 phosphoribosylamine-- 97.2 0.0067 1.7E-07 38.3 10.0 98 1-113 3-100 (426)
382 cd00300 LDH_like L-lactate deh 97.2 0.0016 4E-08 42.6 6.7 78 5-93 1-78 (300)
383 pfam03721 UDPG_MGDP_dh_N UDP-g 97.2 0.0065 1.6E-07 38.4 9.8 163 4-209 2-171 (185)
384 COG2085 Predicted dinucleotide 97.2 0.0066 1.7E-07 38.4 9.8 91 3-114 2-95 (211)
385 PRK05708 2-dehydropantoate 2-r 97.2 0.0026 6.6E-08 41.1 7.7 87 1-98 1-87 (305)
386 PRK07023 short chain dehydroge 97.1 0.0053 1.3E-07 39.0 9.1 76 3-91 2-87 (243)
387 PRK09880 L-idonate 5-dehydroge 97.1 0.011 2.7E-07 37.0 10.5 18 362-379 298-315 (343)
388 PRK05808 3-hydroxybutyryl-CoA 97.1 0.0021 5.5E-08 41.7 6.8 46 2-50 3-48 (282)
389 PTZ00325 malate dehydrogenase; 97.1 0.0024 6.2E-08 41.3 7.0 78 1-92 1-79 (313)
390 PRK04207 glyceraldehyde-3-phos 97.1 0.0035 9E-08 40.2 7.9 145 1-156 1-151 (338)
391 cd00650 LDH_MDH_like NAD-depen 97.1 0.0023 5.8E-08 41.5 6.8 80 5-93 1-82 (263)
392 cd01491 Ube1_repeat1 Ubiquitin 97.1 0.0038 9.7E-08 40.0 7.8 97 2-110 19-135 (286)
393 KOG1611 consensus 97.1 0.0067 1.7E-07 38.3 9.1 84 3-93 4-96 (249)
394 PRK10083 putative dehydrogenas 97.1 0.013 3.2E-07 36.4 10.5 38 362-401 291-333 (339)
395 TIGR01771 L-LDH-NAD L-lactate 97.1 0.0015 3.9E-08 42.7 5.7 78 7-94 1-78 (302)
396 PRK07679 pyrroline-5-carboxyla 97.1 0.0045 1.2E-07 39.5 8.1 91 3-112 4-99 (279)
397 PRK10669 putative cation:proto 97.0 0.028 7.1E-07 34.2 12.6 113 4-148 419-534 (558)
398 KOG4169 consensus 97.0 0.0032 8.2E-08 40.5 7.3 87 3-96 6-98 (261)
399 PRK00885 phosphoribosylamine-- 97.0 0.014 3.5E-07 36.2 10.5 93 4-113 2-94 (424)
400 cd05298 GH4_GlvA_pagL_like Gly 97.0 0.0079 2E-07 37.8 9.1 119 4-130 2-126 (437)
401 KOG2013 consensus 97.0 0.0019 4.8E-08 42.0 5.9 103 3-112 13-135 (603)
402 smart00829 PKS_ER Enoylreducta 97.0 0.011 2.8E-07 36.9 9.8 97 3-113 106-206 (288)
403 PRK07660 consensus 97.0 0.0018 4.5E-08 42.2 5.8 45 3-50 4-48 (283)
404 KOG1430 consensus 97.0 0.0051 1.3E-07 39.1 8.1 99 4-110 6-122 (361)
405 TIGR01809 Shik-DH-AROM shikima 97.0 0.0033 8.4E-08 40.4 7.0 103 4-118 132-245 (291)
406 KOG2017 consensus 97.0 0.0058 1.5E-07 38.7 8.2 102 3-113 67-189 (427)
407 COG0240 GpsA Glycerol-3-phosph 97.0 0.0081 2.1E-07 37.8 9.0 102 2-112 1-105 (329)
408 COG0287 TyrA Prephenate dehydr 97.0 0.003 7.6E-08 40.7 6.7 92 1-113 2-99 (279)
409 pfam02670 DXP_reductoisom 1-de 97.0 0.012 3.1E-07 36.6 9.8 101 5-109 1-118 (129)
410 COG0604 Qor NADPH:quinone redu 97.0 0.016 4E-07 35.9 10.3 97 3-115 144-244 (326)
411 PRK02472 murD UDP-N-acetylmura 97.0 0.0082 2.1E-07 37.7 8.7 91 3-110 10-101 (450)
412 pfam07993 NAD_binding_4 Male s 97.0 0.0097 2.5E-07 37.2 9.1 82 7-91 1-95 (245)
413 cd01075 NAD_bind_Leu_Phe_Val_D 97.0 0.0036 9.3E-08 40.1 6.9 115 3-154 29-144 (200)
414 PRK03562 glutathione-regulated 96.9 0.036 9.1E-07 33.4 12.0 124 3-156 400-524 (615)
415 PRK06728 aspartate-semialdehyd 96.9 0.0045 1.1E-07 39.5 7.1 146 3-176 6-155 (347)
416 PRK09117 consensus 96.9 0.0034 8.7E-08 40.3 6.4 44 3-49 3-46 (282)
417 PRK07530 3-hydroxybutyryl-CoA 96.9 0.0028 7.2E-08 40.9 5.9 46 2-50 4-49 (292)
418 pfam02629 CoA_binding CoA bind 96.9 0.0037 9.5E-08 40.1 6.5 88 2-109 3-90 (96)
419 PRK12464 1-deoxy-D-xylulose 5- 96.9 0.019 4.9E-07 35.2 10.1 136 7-157 1-150 (392)
420 COG0451 WcaG Nucleoside-diphos 96.9 0.0046 1.2E-07 39.4 6.9 73 4-92 2-75 (314)
421 cd01339 LDH-like_MDH L-lactate 96.9 0.0045 1.1E-07 39.5 6.7 77 5-92 1-77 (300)
422 PRK06035 3-hydroxyacyl-CoA deh 96.9 0.0024 6.1E-08 41.4 5.3 45 2-49 3-47 (291)
423 cd05297 GH4_alpha_glucosidase_ 96.9 0.013 3.3E-07 36.4 9.0 134 4-147 2-143 (423)
424 pfam02737 3HCDH_N 3-hydroxyacy 96.8 0.0051 1.3E-07 39.1 6.9 44 4-50 1-44 (180)
425 PRK06129 3-hydroxyacyl-CoA deh 96.8 0.0021 5.4E-08 41.7 4.9 45 3-50 3-47 (308)
426 PRK06545 prephenate dehydrogen 96.8 0.021 5.4E-07 35.0 9.9 91 3-112 1-93 (357)
427 COG1023 Gnd Predicted 6-phosph 96.8 0.022 5.6E-07 34.8 10.0 107 4-115 2-122 (300)
428 PRK07819 3-hydroxybutyryl-CoA 96.8 0.0039 1E-07 39.9 6.1 45 3-50 3-47 (284)
429 PRK03659 glutathione-regulated 96.8 0.02 5.1E-07 35.1 9.7 90 4-108 402-492 (602)
430 cd01337 MDH_glyoxysomal_mitoch 96.8 0.0074 1.9E-07 38.0 7.5 77 4-92 2-79 (310)
431 PRK09422 alcohol dehydrogenase 96.8 0.038 9.8E-07 33.2 11.1 35 362-398 294-329 (338)
432 PRK07066 3-hydroxybutyryl-CoA 96.8 0.0041 1E-07 39.8 5.9 45 3-50 8-52 (321)
433 PRK04308 murD UDP-N-acetylmura 96.8 0.017 4.3E-07 35.6 9.0 89 2-109 5-95 (445)
434 PRK01438 murD UDP-N-acetylmura 96.7 0.018 4.6E-07 35.4 9.0 91 2-109 14-105 (481)
435 TIGR01692 HIBADH 3-hydroxyisob 96.7 0.0087 2.2E-07 37.6 7.3 115 7-157 1-122 (290)
436 smart00859 Semialdhyde_dh Semi 96.7 0.0064 1.6E-07 38.5 6.6 98 4-115 1-102 (122)
437 pfam02056 Glyco_hydro_4 Family 96.7 0.032 8.2E-07 33.7 10.2 158 4-176 1-166 (183)
438 cd05197 GH4_glycoside_hydrolas 96.7 0.015 3.8E-07 36.0 8.3 122 4-133 2-129 (425)
439 pfam02844 GARS_N Phosphoribosy 96.7 0.031 8E-07 33.8 9.9 89 4-109 1-89 (99)
440 PRK06522 2-dehydropantoate 2-r 96.7 0.016 4.1E-07 35.8 8.4 84 4-99 2-86 (307)
441 PRK03806 murD UDP-N-acetylmura 96.6 0.017 4.3E-07 35.6 8.3 89 2-110 6-94 (438)
442 COG2344 AT-rich DNA-binding pr 96.6 0.012 3.1E-07 36.5 7.6 90 3-109 85-174 (211)
443 PRK07417 arogenate dehydrogena 96.6 0.024 6.1E-07 34.6 9.0 89 3-113 2-93 (280)
444 KOG2865 consensus 96.6 0.01 2.6E-07 37.1 7.0 97 5-113 64-177 (391)
445 PRK08268 3-hydroxybutyryl-CoA 96.6 0.0067 1.7E-07 38.3 6.0 79 3-94 4-95 (503)
446 COG1004 Ugd Predicted UDP-gluc 96.6 0.018 4.5E-07 35.5 8.2 131 3-166 1-137 (414)
447 KOG1610 consensus 96.6 0.027 6.8E-07 34.3 9.0 80 2-91 29-116 (322)
448 PRK08300 acetaldehyde dehydrog 96.6 0.022 5.5E-07 34.9 8.5 148 1-176 2-152 (298)
449 PRK00683 murD UDP-N-acetylmura 96.6 0.0079 2E-07 37.8 6.2 85 2-109 3-87 (418)
450 cd05294 LDH-like_MDH_nadp A la 96.6 0.0073 1.9E-07 38.1 6.0 79 4-92 2-83 (309)
451 PRK08040 putative semialdehyde 96.6 0.0032 8.2E-08 40.5 4.1 134 1-157 1-140 (337)
452 cd05313 NAD_bind_2_Glu_DH NAD( 96.5 0.066 1.7E-06 31.6 11.0 131 2-153 38-181 (254)
453 COG0039 Mdh Malate/lactate deh 96.5 0.0072 1.8E-07 38.1 5.7 81 3-93 1-81 (313)
454 KOG0069 consensus 96.5 0.042 1.1E-06 33.0 9.6 12 136-147 101-112 (336)
455 PRK01710 murD UDP-N-acetylmura 96.5 0.029 7.4E-07 34.0 8.8 92 2-110 14-106 (458)
456 PRK08309 short chain dehydroge 96.5 0.019 4.9E-07 35.3 7.7 67 4-79 2-68 (182)
457 PRK08507 prephenate dehydrogen 96.5 0.011 2.7E-07 37.0 6.3 89 4-113 2-92 (275)
458 PRK10754 quinone oxidoreductas 96.4 0.049 1.2E-06 32.5 9.6 43 1-43 1-47 (327)
459 COG0686 Ald Alanine dehydrogen 96.4 0.018 4.5E-07 35.5 7.3 41 69-111 19-60 (371)
460 PRK02318 mannitol-1-phosphate 96.4 0.062 1.6E-06 31.8 10.0 85 4-94 2-93 (381)
461 PRK01390 murD UDP-N-acetylmura 96.4 0.016 4.2E-07 35.7 7.0 85 2-109 9-97 (457)
462 COG1648 CysG Siroheme synthase 96.4 0.082 2.1E-06 31.0 11.3 130 2-164 12-144 (210)
463 PRK00421 murC UDP-N-acetylmura 96.4 0.051 1.3E-06 32.4 9.4 87 3-110 9-96 (459)
464 PRK02705 murD UDP-N-acetylmura 96.4 0.046 1.2E-06 32.7 9.1 93 5-109 3-96 (459)
465 PRK13790 phosphoribosylamine-- 96.4 0.06 1.5E-06 31.9 9.7 94 4-113 2-95 (415)
466 PRK05086 malate dehydrogenase; 96.4 0.0058 1.5E-07 38.8 4.5 78 4-92 2-80 (312)
467 PRK09287 6-phosphogluconate de 96.3 0.075 1.9E-06 31.2 10.1 95 13-112 1-114 (459)
468 COG0136 Asd Aspartate-semialde 96.3 0.012 3E-07 36.7 5.9 98 2-114 1-99 (334)
469 PRK02006 murD UDP-N-acetylmura 96.3 0.086 2.2E-06 30.8 10.3 34 2-38 7-40 (501)
470 PRK04663 murD UDP-N-acetylmura 96.3 0.025 6.5E-07 34.4 7.6 89 3-109 8-96 (438)
471 TIGR03376 glycerol3P_DH glycer 96.3 0.05 1.3E-06 32.4 9.1 106 4-112 1-116 (342)
472 PRK11259 solA N-methyltryptoph 96.3 0.0068 1.7E-07 38.3 4.6 34 1-37 2-35 (377)
473 PRK09288 purT phosphoribosylgl 96.3 0.057 1.5E-06 32.0 9.3 90 2-109 12-102 (395)
474 KOG0024 consensus 96.3 0.093 2.4E-06 30.6 11.6 80 2-92 170-253 (354)
475 PRK05784 phosphoribosylamine-- 96.2 0.096 2.5E-06 30.5 10.7 95 4-112 2-100 (485)
476 KOG1203 consensus 96.2 0.097 2.5E-06 30.5 11.3 100 3-111 80-198 (411)
477 COG1250 FadB 3-hydroxyacyl-CoA 96.2 0.018 4.5E-07 35.5 6.4 47 1-50 2-48 (307)
478 KOG1210 consensus 96.2 0.054 1.4E-06 32.2 8.9 84 3-92 34-123 (331)
479 TIGR00877 purD phosphoribosyla 96.2 0.045 1.1E-06 32.7 8.5 97 3-112 1-99 (459)
480 PRK01368 murD UDP-N-acetylmura 96.2 0.029 7.4E-07 34.0 7.5 87 2-110 6-92 (450)
481 cd01490 Ube1_repeat2 Ubiquitin 96.2 0.051 1.3E-06 32.4 8.7 105 4-113 1-131 (435)
482 cd01493 APPBP1_RUB Ubiquitin a 96.2 0.054 1.4E-06 32.2 8.6 101 2-112 20-144 (425)
483 PRK11064 wecC UDP-N-acetyl-D-m 96.2 0.11 2.7E-06 30.2 13.2 124 2-165 3-135 (415)
484 TIGR02824 quinone_pig3 putativ 96.1 0.058 1.5E-06 32.0 8.7 97 4-113 147-246 (334)
485 pfam01564 Spermine_synth Sperm 96.1 0.11 2.9E-06 30.0 10.9 81 3-90 77-157 (240)
486 PRK05562 precorrin-2 dehydroge 96.1 0.11 2.9E-06 30.0 11.5 130 2-163 24-155 (222)
487 PRK11730 fadB multifunctional 96.1 0.014 3.5E-07 36.3 5.2 44 3-49 314-357 (715)
488 TIGR00978 asd_EA aspartate-sem 96.1 0.0087 2.2E-07 37.6 4.2 106 4-112 2-111 (358)
489 PRK00811 spermidine synthase; 96.1 0.12 3E-06 29.9 10.1 81 2-89 79-160 (283)
490 cd05296 GH4_P_beta_glucosidase 96.1 0.064 1.6E-06 31.7 8.5 123 4-134 2-131 (419)
491 COG0677 WecC UDP-N-acetyl-D-ma 96.0 0.12 3.1E-06 29.8 11.2 147 1-187 8-166 (436)
492 TIGR01763 MalateDH_bact malate 96.0 0.01 2.7E-07 37.0 4.4 94 2-108 1-111 (308)
493 pfam02558 ApbA Ketopantoate re 96.0 0.035 9E-07 33.5 7.0 86 5-101 1-86 (150)
494 cd01486 Apg7 Apg7 is an E1-lik 96.0 0.044 1.1E-06 32.8 7.4 34 4-39 1-34 (307)
495 PRK05225 ketol-acid reductoiso 96.0 0.028 7.2E-07 34.1 6.4 81 2-100 37-117 (489)
496 PRK07729 glyceraldehyde-3-phos 96.0 0.12 3.2E-06 29.8 9.7 108 1-113 1-121 (343)
497 TIGR02817 adh_fam_1 zinc-bindi 95.9 0.034 8.6E-07 33.6 6.7 77 1-113 150-227 (338)
498 TIGR03215 ac_ald_DH_ac acetald 95.9 0.078 2E-06 31.1 8.4 128 2-155 1-130 (285)
499 PRK04690 murD UDP-N-acetylmura 95.9 0.09 2.3E-06 30.7 8.7 91 2-110 8-98 (468)
500 PRK12921 2-dehydropantoate 2-r 95.9 0.039 1E-06 33.1 6.8 85 4-100 2-87 (306)
No 1
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=0 Score=513.19 Aligned_cols=377 Identities=42% Similarity=0.722 Sum_probs=353.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.++|||+|||+||+.++++|+++.+ .+|++|||+.+++.++.+... .+++++++|+.|.+++.++++++
T Consensus 1 m~~ilviGaG~Vg~~va~~la~~~d--~~V~iAdRs~~~~~~i~~~~~--------~~v~~~~vD~~d~~al~~li~~~- 69 (389)
T COG1748 1 MMKILVIGAGGVGSVVAHKLAQNGD--GEVTIADRSKEKCARIAELIG--------GKVEALQVDAADVDALVALIKDF- 69 (389)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHCC--------CCCEEEEECCCCHHHHHHHHHCC-
T ss_conf 9728998986667999999985789--629998488889999875334--------66316994256758899987257-
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHH
Q ss_conf 72999737610032789999862886896036642000014420000357751088885188699537501114889999
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAFAR 161 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~lla~ 161 (419)
|+|||++|||++..++++|+++|+||+|+|++.+. + ++++++|+++|+++|++||+|||++|+++.
T Consensus 70 -d~VIn~~p~~~~~~i~ka~i~~gv~yvDts~~~~~------------~-~~~~~~a~~Agit~v~~~G~dPGi~nv~a~ 135 (389)
T COG1748 70 -DLVINAAPPFVDLTILKACIKTGVDYVDTSYYEEP------------P-WKLDEEAKKAGITAVLGCGFDPGITNVLAA 135 (389)
T ss_pred -CEEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCH------------H-HHHHHHHHHCCCEEECCCCCCCCHHHHHHH
T ss_conf -78999287054299999999859988975467750------------6-565489887490797166768645799999
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCC---CCCCCCCCHHHHHHHCCCCEEEEECCEEEEECCCCCCEEEECCCCCCCEEEEE
Q ss_conf 999974366638976302478888---66654256899886225982999999589954677526897788776403640
Q gi|254780742|r 162 LAQDEYFDKITDIDIIDVNAGKHD---KYFATNFDAEINLREFTGVVYSWQKNQWCVNKMFEISRTYDLPTVGQHKVYLS 238 (419)
Q Consensus 162 ~~~~~~~d~~~~i~~~~~~~~~~~---~~~~~~~s~~~~l~~~~~~~~~~~~G~~~~~~~~~~~~~~~fp~~g~~~~~~~ 238 (419)
+++++++|++++|++++++.|.++ ..|+++||++.+|+++++|+++|+||+|+.++|++..+.++||..|....|.+
T Consensus 136 ~a~~~~~~~i~si~iy~g~~g~~~~~~l~ya~tws~e~~l~e~~~p~~~~~~Gk~~~v~~~~~~~~~~~~~~G~~~~y~~ 215 (389)
T COG1748 136 YAAKELFDEIESIDIYVGGLGEHGDNPLGYATTWSPEINLREYTRPARYWENGKWVEVDPLEEREVFEFPVIGYGDVYAF 215 (389)
T ss_pred HHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEECHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEC
T ss_conf 99998616564899998258989887765326625788689754755998478799816656323324677873258953
Q ss_pred CCCCHHHHHHCCC-CCEEEEECC-CCHHHHHHHHHHHHHHCCCCCCCHHHCCCEECHHHHHHHHCCCCCCCCCCCCCEEE
Q ss_conf 4842345653486-631788213-48879877766543000131100110793413589987642342356876565179
Q gi|254780742|r 239 GHDEIHSLFKNIQ-GADIRFWMG-FSDHYINVFTVLKNIGLLSEQPIRTAENIEIAPLKIVKAVLPDPSSLAPNYQGKTC 316 (419)
Q Consensus 239 ~~~e~~tl~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~ 316 (419)
+|+|+.||.++++ .++.+++++ ++++|.++++.+.++|+++.+|++.. +.+.|++++.++++++.++.++.+|.++
T Consensus 216 ~~~el~sL~~~i~~~~~~~~~~t~r~~g~~~~i~~L~~lGll~~~~v~~~--~~i~p~eflk~vl~~~~s~~~~~~d~t~ 293 (389)
T COG1748 216 YHDELRSLVKTIPGVVRTRFEMTFRYPGHLEVIKALRDLGLLSREPVKVQ--QEIVPLEFLKAVLPDPLSLAPDYKDVTV 293 (389)
T ss_pred CCCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCC--CCCCHHHHHHHHCCCCCCCCCCCCCEEE
T ss_conf 78227779775754000467760486409999999987578865543335--5446488899863450136877686599
Q ss_pred EEEEEEEEECCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHCC
Q ss_conf 99999999899679999984211532257556304568888999999999987998778620778859489999999679
Q gi|254780742|r 317 IGCLINGIYHGETREIFLYNICDHQNAYQEIASQGISYTAGTPPVATAILIAQGIWDIGKMVNIEELPPKPFLGTLQRMG 396 (419)
Q Consensus 317 ~~~~v~g~~~g~~~~~~~~~~~~~~~~~~~~~~~am~~tTg~p~a~aa~lil~g~i~~~GV~~Pe~~~~~~fl~~L~~~G 396 (419)
+++.++|.|+|+.++.+ |+..+|..++.+.+.|+|++|||.|++++++++++|+|.++||+.||.+++++|+..+...|
T Consensus 294 i~v~v~G~kdG~~~~~~-y~~~~~~~~~~~~~~~ais~ttg~pa~~~a~ll~~g~~~~~Gv~~~E~l~~~~~~~~~~~~~ 372 (389)
T COG1748 294 IGVEVKGTKDGRDKTVF-YNVKDHAEAYSEVGSSAISYTTGVPAAIGAELLAEGEWETPGVVNPEELGPDPFLEKLLIRG 372 (389)
T ss_pred EEEEEEEEECCEEEEEE-ECCHHHHHHHHCCCCCEEEHHCCCCHHHHHHHHHCCCCCCCCEECHHHHCCCHHHHHHHHCC
T ss_conf 99999977868656897-41113677752056210123105417999999975887868574299907870378885225
Q ss_pred CEEEEEECCC
Q ss_conf 8099997278
Q gi|254780742|r 397 LATSLRTNHK 406 (419)
Q Consensus 397 i~~~v~~~~~ 406 (419)
++++..++++
T Consensus 373 l~~~~~~~~~ 382 (389)
T COG1748 373 LPWRGVENEG 382 (389)
T ss_pred CCCHHCCCCC
T ss_conf 7510014677
No 2
>pfam03435 Saccharop_dh Saccharopine dehydrogenase. This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase.
Probab=100.00 E-value=0 Score=464.55 Aligned_cols=367 Identities=32% Similarity=0.513 Sum_probs=325.3
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE
Q ss_conf 99984987799999999960898725999639999999999873430245555573089943789899999997539729
Q gi|254780742|r 5 VLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQI 84 (419)
Q Consensus 5 ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dv 84 (419)
|||+|||.||+.++++|+++.+. .+|+|+||+.++++++++.. ...+++..++|+.|.++|.+++++ .|+
T Consensus 1 IlvlGaG~vG~~~~~~L~~~~~~-~~i~vad~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~l~~~~~~--~di 70 (384)
T pfam03435 1 VLIIGAGGVGQGVAPLLARHGDV-DEITVADRSLEKAQALAAPK-------LGLRFIAIAVDADNYEALAALLKE--GDL 70 (384)
T ss_pred CEEECCCHHHHHHHHHHHHCCCC-CEEEEEECCHHHHHHHHHHC-------CCCCEEEEEECCCCHHHHHHHHHC--CCE
T ss_conf 98989778799999999728998-86999989889989877523-------698538999577899999998712--899
Q ss_pred EEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHH
Q ss_conf 99737610032789999862886896036642000014420000357751088885188699537501114889999999
Q gi|254780742|r 85 IINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAFARLAQ 164 (419)
Q Consensus 85 Vin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~lla~~~~ 164 (419)
|||++||+++..++++|+++|+||+|+++.. ..+++||++|+++|++++++||++||++|++|++++
T Consensus 71 Vv~~~p~~~~~~i~~~c~~~g~~yvd~s~~~-------------~~~~~l~~~a~~ag~~~~~~~G~~PGi~~~~a~~~~ 137 (384)
T pfam03435 71 VINLAPPFLSLTVLKACIETGVHYVDTSYLR-------------EAQLALHEKAKEAGVTAVLGCGFDPGLVSVFAKYAL 137 (384)
T ss_pred EEECCCHHHCHHHHHHHHHCCCCEEECCCCH-------------HHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 9999843416999999997399757534366-------------889999997765696899678889884689999999
Q ss_pred HHHCCCCCEEEEEECCCCCC------CCCCCCCCCHHHHHHHCCCCEEEEECCEEEEECCCCCCEEEECCC-CCCCEEEE
Q ss_conf 97436663897630247888------866654256899886225982999999589954677526897788-77640364
Q gi|254780742|r 165 DEYFDKITDIDIIDVNAGKH------DKYFATNFDAEINLREFTGVVYSWQKNQWCVNKMFEISRTYDLPT-VGQHKVYL 237 (419)
Q Consensus 165 ~~~~d~~~~i~~~~~~~~~~------~~~~~~~~s~~~~l~~~~~~~~~~~~G~~~~~~~~~~~~~~~fp~-~g~~~~~~ 237 (419)
+++.++.+.+..+.+++|.. |+.|+++||++++++++.+|+++|+||+++.++|++..+.+.||. ++....|.
T Consensus 138 ~~l~~~~~~i~~~~~~~Gg~p~~~~~p~~y~~sws~~g~i~e~~~~a~~~~nG~~~~v~~~s~~~~~~~~~~~~~g~~~e 217 (384)
T pfam03435 138 DDLADELAKVLSVKIHCGGRPEPKDNGLEFANTWSPEGLLEELTNPARYWENGKWVEVGWGSHERTIPFPYGHGPGYAYE 217 (384)
T ss_pred HHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEECHHHHHHHHCCCCEEEECCEEEEECCCCCCEEECCCCCCCCCEEEE
T ss_conf 99875258289999842688888877654226744889898736864799999999967987435412664447630689
Q ss_pred ECCCCHHHHHHCCCC----CEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCEECHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 048423456534866----3178821348879877766543000131100110793413589987642342356876565
Q gi|254780742|r 238 SGHDEIHSLFKNIQG----ADIRFWMGFSDHYINVFTVLKNIGLLSEQPIRTAENIEIAPLKIVKAVLPDPSSLAPNYQG 313 (419)
Q Consensus 238 ~~~~e~~tl~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~ 313 (419)
..|++..+.++.+.. .++.+++.++++|++.++.+..+++++.+++.. ...|+++++++++.++++.+.++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~~tlr~~g~~~~~~~l~~lgl~~~~~~~~----~~~~~~~l~~~l~~~~~~~~~~~d 293 (384)
T pfam03435 218 IYHNRPGTLTRVRSWLPEAGGVLFGTIRIPGYLTVIKLLGDLGLLRPTVHYA----YIPPLDALKALLESPASLGPEEQD 293 (384)
T ss_pred EECCCCCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHC----CCCHHHHHHHHCHHHHHCCCCCCC
T ss_conf 9779885202673178766718997323177999999998556888871011----388799999858444513898898
Q ss_pred EEEEEEEEEEE-ECCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH-CCHHHHHHH
Q ss_conf 17999999999-8996799999842115322575563045688889999999999879987786207788-594899999
Q gi|254780742|r 314 KTCIGCLINGI-YHGETREIFLYNICDHQNAYQEIASQGISYTAGTPPVATAILIAQGIWDIGKMVNIEE-LPPKPFLGT 391 (419)
Q Consensus 314 ~~~~~~~v~g~-~~g~~~~~~~~~~~~~~~~~~~~~~~am~~tTg~p~a~aa~lil~g~i~~~GV~~Pe~-~~~~~fl~~ 391 (419)
.+++++.++|+ ++|+..+...++..++... .+.+.++|++|||+|+++++++|++|+|+++||++||+ +++++|++.
T Consensus 294 ~~~~~~~v~g~~k~G~~~~~~~~~~~~~~~~-~~~~~~ama~ttg~p~ai~a~li~~g~i~~~GV~~PE~~~~~~~~~~~ 372 (384)
T pfam03435 294 KVRIGVEVEGIDKLGVLLTGHIYNVYGSGLS-IEEGRSAMPYTTGTPAQVAAALLAGGEWAKPGVVEPEEDLDPDPFLPA 372 (384)
T ss_pred EEEEEEEEEEEECCCCEEEEEEEEEECCCCC-CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHH
T ss_conf 2899999999946981899999987624225-212454868988598999999996897288957994236884479999
Q ss_pred HHHC---CCEE
Q ss_conf 9967---9809
Q gi|254780742|r 392 LQRM---GLAT 399 (419)
Q Consensus 392 L~~~---Gi~~ 399 (419)
|++. |+.+
T Consensus 373 l~~l~~~Gi~~ 383 (384)
T pfam03435 373 LPYLGKVGIYI 383 (384)
T ss_pred HHHHHHCCCCC
T ss_conf 99988539736
No 3
>KOG0172 consensus
Probab=100.00 E-value=1.2e-41 Score=300.22 Aligned_cols=372 Identities=16% Similarity=0.170 Sum_probs=300.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHH-HHHHHHHH
Q ss_conf 97319998498779999999996089872599963999999999987343024555557308994378989-99999975
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIK-AVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~-~l~~~~~~ 79 (419)
|+|+||++|+|.|+++++.+|+++.++ +++||.|...+++++++.. .++.+.+|+.+.+ +|.+.+++
T Consensus 1 ~~~~vlllgsg~v~~p~~d~ls~~~dv--~vtva~~~~~~~~~~~~~~----------~~~av~ldv~~~~~~L~~~v~~ 68 (445)
T KOG0172 1 TKKGVLLLGSGFVSRPVADFLSRKKDV--NVTVASRTLKDAEALVKGI----------NIKAVSLDVADEELALRKEVKP 68 (445)
T ss_pred CCCCEEEECCCCCCCHHHHHHHHCCCC--EEEEEHHHHHHHHHHHCCC----------CCCCEEEECCCHHHHHHHHHCC
T ss_conf 986269953753133478887416782--3898634677899984278----------8650677742517889865154
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
Q ss_conf 39729997376100327899998628868960366420000144200003577510888851886995375011148899
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAF 159 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ll 159 (419)
+ |+||+..|+.+|..|+++|+..+.|.+..|+.+++++ +|+..++.+|++++.++|++||++||+
T Consensus 69 ~--D~viSLlP~t~h~lVaK~~i~~~~~~vtsSyv~pe~~-------------~L~~~~v~AG~ti~~e~gldpGidhm~ 133 (445)
T KOG0172 69 L--DLVISLLPYTFHPLVAKGCIITKEDSVTSSYVDPELE-------------ELEKAAVPAGSTIMNEIGLDPGIDHMP 133 (445)
T ss_pred C--CEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH-------------HHHHHCCCCCCEEECCCCCCCCHHHHH
T ss_conf 1--1266404301338899888886403541103688898-------------621121478855764456674444413
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCC--------CCCCCCCHHHHHHHCCCCEEEEECCEEEEECCCC---CCEEEECC
Q ss_conf 999999743666389763024788886--------6654256899886225982999999589954677---52689778
Q gi|254780742|r 160 ARLAQDEYFDKITDIDIIDVNAGKHDK--------YFATNFDAEINLREFTGVVYSWQKNQWCVNKMFE---ISRTYDLP 228 (419)
Q Consensus 160 a~~~~~~~~d~~~~i~~~~~~~~~~~~--------~~~~~~s~~~~l~~~~~~~~~~~~G~~~~~~~~~---~~~~~~fp 228 (419)
++..++.....+..+++|.++||..|. +|+++||+.+++....+++++|.||....++.-+ ....++|-
T Consensus 134 a~~ti~~vh~hgg~i~sf~sycGglpape~s~nplgykfsws~~gvl~a~rnsAky~~~Gkiv~v~g~~~~~~~~~~~~~ 213 (445)
T KOG0172 134 AMKTIDLVHEHGGKIKSFKSYCGGLPAPERSNNPLGYKFSWSPLGVLLALRNSAKYYKNGKIVEVDGGDLADTATHYDFY 213 (445)
T ss_pred HHCCCHHHHHHCCEEEEHHHHCCCCCCHHHCCCCCCEEECCCHHHHHHHCCCCCHHCCCCEEEEECCCCHHHHCCCCCCC
T ss_conf 31243678863346655154327866742378976505514654566651140012027717873350087631574447
Q ss_pred CCCCCEEEEECCCCHHHHHHCCC--CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHC--C----------------
Q ss_conf 87764036404842345653486--631788213488798777665430001311001107--9----------------
Q gi|254780742|r 229 TVGQHKVYLSGHDEIHSLFKNIQ--GADIRFWMGFSDHYINVFTVLKNIGLLSEQPIRTAE--N---------------- 288 (419)
Q Consensus 229 ~~g~~~~~~~~~~e~~tl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~--~---------------- 288 (419)
+...+.+|+......+...+..+ ++++...+.++.+|...+..+...|++..+-...+. +
T Consensus 214 pg~al~~yPNrdst~y~evy~I~~ea~tilrgtlryqgf~~~i~aL~~~G~~~~da~~~~~~~an~L~W~~~~~~~~g~~ 293 (445)
T KOG0172 214 PGPALECYPNRDSTEYSEVYGIPREAKTILRGTLRYQGFVLIIGALVRCGLLACDALEKFSIPANILTWKELLTSLGGPF 293 (445)
T ss_pred CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCC
T ss_conf 66511026896425677774662889999850333345889999998717651435766089888654778888623987
Q ss_pred --------------------------------------CEECHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCEEE
Q ss_conf --------------------------------------341358998764234235687656517999999999899679
Q gi|254780742|r 289 --------------------------------------IEIAPLKIVKAVLPDPSSLAPNYQGKTCIGCLINGIYHGETR 330 (419)
Q Consensus 289 --------------------------------------~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~v~g~~~g~~~ 330 (419)
..-.+.|.++..++.+..+.+++.|++.+.+.+..+-.....
T Consensus 294 ~~i~ed~i~~i~~~~~~~~~~~l~~~e~Lg~~~~k~v~~~~~~~DTl~~~l~~~l~y~~~e~Dmvvl~h~~~~~~p~g~~ 373 (445)
T KOG0172 294 SEIEEDDIKVICIYLSGKDPRILSTLEWLGLFSDKLVTVRGVSLDTLCPHLEEPLYYVDTEFDMVVLQHKFGTEPPEGKV 373 (445)
T ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCEECCCCCCCEEEEEECCEEECCCCCE
T ss_conf 67648899999998616864001145761797666135567741003534530000367755416897314056798735
Q ss_pred EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH-HCCHHHHHHHHHHCCCEEEEE
Q ss_conf 999984211532257556304568888999999999987998778620778-859489999999679809999
Q gi|254780742|r 331 EIFLYNICDHQNAYQEIASQGISYTAGTPPVATAILIAQGIWDIGKMVNIE-ELPPKPFLGTLQRMGLATSLR 402 (419)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~am~~tTg~p~a~aa~lil~g~i~~~GV~~Pe-~~~~~~fl~~L~~~Gi~~~v~ 402 (419)
+......++ ...+.|.++|++|+|+|+|++++++++|+|+.+|++.|- .=-..|.+++|.++||....+
T Consensus 374 e~~t~~l~~---yg~~ng~samaktVg~p~ai~~~~~l~~~I~akgl~~p~~~ev~~p~l~~l~~~gi~~~~~ 443 (445)
T KOG0172 374 ESITHTLVL---YGRENGESAMAKTVGSPTAIAAKMLLDGWIRAKGLLRPMSAEVYRPALDRLKAYGIKLTEK 443 (445)
T ss_pred EEEEECHHH---CCCCCCHHHHHHHCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf 786513766---2786514378775175676666642643340343344366876318999999728244441
No 4
>KOG2733 consensus
Probab=100.00 E-value=2e-36 Score=264.95 Aligned_cols=377 Identities=12% Similarity=0.127 Sum_probs=231.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCC-CCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-877999999999608-9872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNN-DILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~-~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.+++|+|| |.+|..+++++.+.. -....|.|||||++|++++.+++...........+ +..+|.+|+++|.+++++
T Consensus 6 yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~- 83 (423)
T KOG2733 6 YDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQ- 83 (423)
T ss_pred EEEEEECCCCCCCEEEHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCE-EEEECCCCHHHHHHHHHH-
T ss_conf 359998156665302489886430246754787327888999999998632488866543-899437887899999864-
Q ss_pred CCCEEEECCCCC--CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHH
Q ss_conf 972999737610--032789999862886896036642000014420000357751088885188699537501114889
Q gi|254780742|r 81 NSQIIINVGSSF--LNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNA 158 (419)
Q Consensus 81 ~~dvVin~~~p~--~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~l 158 (419)
+.||+||+||| ++++|++||+|+|+||+|++| |+.|++.|+++||++|+++|+.+|..||||+.+.+|
T Consensus 84 -~~vivN~vGPyR~hGE~VVkacienG~~~vDISG---------EP~f~E~mq~kYhd~A~ekGVYIVsaCGfDSIPaDl 153 (423)
T KOG2733 84 -ARVIVNCVGPYRFHGEPVVKACIENGTHHVDISG---------EPQFMERMQLKYHDLAKEKGVYIVSACGFDSIPADL 153 (423)
T ss_pred -HEEEEECCCCCEECCCHHHHHHHHCCCCEECCCC---------CHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
T ss_conf -1787751556312471899999875985331478---------879999998878777775573999504667777510
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC-HHHHHHHCCCCEEEE--E---------CC--EEEEECCCCCCEE
Q ss_conf 99999997436663897630247888866654256-899886225982999--9---------99--5899546775268
Q gi|254780742|r 159 FARLAQDEYFDKITDIDIIDVNAGKHDKYFATNFD-AEINLREFTGVVYSW--Q---------KN--QWCVNKMFEISRT 224 (419)
Q Consensus 159 la~~~~~~~~d~~~~i~~~~~~~~~~~~~~~~~~s-~~~~l~~~~~~~~~~--~---------~G--~~~~~~~~~~~~~ 224 (419)
-+.+..+...+.+..|+.+..-.-..|.+|..+.. .+.++..+.+..... + ++ ..+++++...
T Consensus 154 Gv~f~~k~fdg~ln~VEsfl~Lh~~gp~G~sln~gTweSallg~~n~~~l~~lR~~~~p~~ip~~~~~lkkR~~l~~--- 230 (423)
T KOG2733 154 GVMFLRKNFDGVLNHVESFLQLHSKGPSGYSLNTGTWESALLGVANASELKALRKSIMPQPIPNGCPPLKKRPTLWK--- 230 (423)
T ss_pred EEEEEHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE---
T ss_conf 01443633256488899898551567765532444199999874584888988764277767667878887773003---
Q ss_pred EECCCCCCCEEEEECCCCHHHHHHC-------CCCC--EEEEECCCCHHHHHHHHH---HHHHHCCCCCCCHHHCCCEEC
Q ss_conf 9778877640364048423456534-------8663--178821348879877766---543000131100110793413
Q gi|254780742|r 225 YDLPTVGQHKVYLSGHDEIHSLFKN-------IQGA--DIRFWMGFSDHYINVFTV---LKNIGLLSEQPIRTAENIEIA 292 (419)
Q Consensus 225 ~~fp~~g~~~~~~~~~~e~~tl~~~-------~~~~--~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~v~~~~~~~~~ 292 (419)
..+.+ ..+.+++..+..-+.|+ ...+ .+..+... ++.....+. ...+++++.... .......
T Consensus 231 --~~e~~-g~alpFpgaD~SVV~RSQ~~l~~~~~~rPv~~~ay~~~-~s~~~~~~~~~~~~~~~~fskf~~--gR~lLlk 304 (423)
T KOG2733 231 --IKEKG-GVALPFPGADKSVVRRSQYYLYESRKVRPVHMQAYITV-GSRFGAIKLVFFGWILGFFSKFSF--GRRLLLK 304 (423)
T ss_pred --EEECC-CEEEECCCCCHHHEEHHHHHHHHHCCCCCEEEEEEEEE-CCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHH
T ss_conf --53136-16865588863421057777777516886267879855-530179999999999999985317--7899986
Q ss_pred HHHHHHHHCCCCCCCCCCCCCEEEEEEEE--EEEECCEE----EEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 58998764234235687656517999999--99989967----9999984211532257556304568888999999999
Q gi|254780742|r 293 PLKIVKAVLPDPSSLAPNYQGKTCIGCLI--NGIYHGET----REIFLYNICDHQNAYQEIASQGISYTAGTPPVATAIL 366 (419)
Q Consensus 293 p~~~~~~~l~~~~~~~~~~~~~~~~~~~v--~g~~~g~~----~~~~~~~~~~~~~~~~~~~~~am~~tTg~p~a~aa~l 366 (419)
.-+++.-.++.+..+.+.+.+......++ +|.+++.+ .+......+-....+++.|+ .+|.+.+.-+|.-
T Consensus 305 yP~~fSfg~fsksGPSe~qm~~AtFt~~f~g~Gy~~~~~l~~~~~~~~~~kl~~~~sGPd~gY----iaT~i~vlsaalt 380 (423)
T KOG2733 305 YPDFFSFGMFSKSGPSEEQMEEATFTMWFFGYGYKEGEPLDKQHEQKTDKKLLVRCSGPDPGY----IATSICVLSAALT 380 (423)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCH----HHCCHHHHHHHHH
T ss_conf 735111322014799888973207999999852677874101466665527999842898531----0002899999999
Q ss_pred HHCC---CCCCCCCCCHH-HCCHHHHHHHHHHCCCEEEEEEC
Q ss_conf 9879---98778620778-85948999999967980999972
Q gi|254780742|r 367 IAQG---IWDIGKMVNIE-ELPPKPFLGTLQRMGLATSLRTN 404 (419)
Q Consensus 367 il~g---~i~~~GV~~Pe-~~~~~~fl~~L~~~Gi~~~v~~~ 404 (419)
+|.. ..+.+||++|. ++.-..++++|+++||.|++..+
T Consensus 381 ~L~~~~~lpk~GGV~tPaaaF~~T~i~~~L~~~GI~Fel~s~ 422 (423)
T KOG2733 381 LLKDKDKLPKGGGVYTPAAAFGNTKIIDRLAKHGIKFELISE 422 (423)
T ss_pred HHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHCCCEEEEEEC
T ss_conf 987764188788704820621677199999865925898737
No 5
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=3.5e-31 Score=229.49 Aligned_cols=355 Identities=14% Similarity=0.090 Sum_probs=226.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.++++|+|| |.+|..++++|+++... -++|+||..|++++...|.. ++...+..++..+.+++++
T Consensus 5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~---~aLAgRs~~kl~~l~~~LG~----------~~~~~p~~~p~~~~~~~~~ 71 (382)
T COG3268 5 REYDIIIYGATGYAGGLVAEYLAREGLT---AALAGRSSAKLDALRASLGP----------EAAVFPLGVPAALEAMASR 71 (382)
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHCCCC---HHHCCCCHHHHHHHHHHCCC----------CCCCCCCCCHHHHHHHHHC
T ss_conf 6403899746552158999999974886---43216888999889985096----------6444677888999999742
Q ss_pred CCCCEEEECCCCC--CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
Q ss_conf 3972999737610--03278999986288689603664200001442000035775108888518869953750111488
Q gi|254780742|r 80 TNSQIIINVGSSF--LNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVN 157 (419)
Q Consensus 80 ~~~dvVin~~~p~--~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ 157 (419)
+ +||+||+||| ++.+++++|+.+|+||+|+++ |..|++..+.+||++|+++|+.|+++||||..++|
T Consensus 72 ~--~VVlncvGPyt~~g~plv~aC~~~GTdY~DiTG---------Ei~~fe~~i~~yh~~A~~~Ga~Ii~~cGFDsIPsD 140 (382)
T COG3268 72 T--QVVLNCVGPYTRYGEPLVAACAAAGTDYADITG---------EIMFFENSIDLYHAQAADAGARIIPGCGFDSIPSD 140 (382)
T ss_pred C--EEEEECCCCCCCCCCHHHHHHHHHCCCEEECCC---------CHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
T ss_conf 6--689961466120264799999971987241356---------17999999888777887559789666777767640
Q ss_pred HHHHHHHHH-HCCCCCE---EEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCEEEEECCCCCCEE---EECC-C
Q ss_conf 999999997-4366638---976302478888666542568998862259829999995899546775268---9778-8
Q gi|254780742|r 158 AFARLAQDE-YFDKITD---IDIIDVNAGKHDKYFATNFDAEINLREFTGVVYSWQKNQWCVNKMFEISRT---YDLP-T 229 (419)
Q Consensus 158 lla~~~~~~-~~d~~~~---i~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~G~~~~~~~~~~~~~---~~fp-~ 229 (419)
+-++.+.++ +.|..++ .+.........+.+..+ ..+..+.+....+..++|+...+|..-.++. ++|| +
T Consensus 141 l~v~~l~~~~~~d~~~~~~~t~l~l~s~t~~g~S~GT---aat~~e~l~~~~~~~~~gr~~~~P~~~~~~r~~~iDf~~~ 217 (382)
T COG3268 141 LGVYALLKQALPDGTEELIATHLALGSFTGSGISGGT---AATSVEGLATAGKDPEAGRLLRVPYALKKRRGAEIDFPSR 217 (382)
T ss_pred HHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCCCCC---HHHHHHHHHHCCCCCCCCCEECCCCEECCCCCCCCCCCCC
T ss_conf 1899999864764444223321001312567746520---9989999875057814484543673231477777776667
Q ss_pred CCCCEEEEECCCCHHHHHHCCCCC---EEEEECCCCHHHHHHHHHHH-HHHCCCCCCCHHHCCCEECHHHHHHHHCCCCC
Q ss_conf 776403640484234565348663---17882134887987776654-30001311001107934135899876423423
Q gi|254780742|r 230 VGQHKVYLSGHDEIHSLFKNIQGA---DIRFWMGFSDHYINVFTVLK-NIGLLSEQPIRTAENIEIAPLKIVKAVLPDPS 305 (419)
Q Consensus 230 ~g~~~~~~~~~~e~~tl~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~v~~~~~~~~~p~~~~~~~l~~~~ 305 (419)
.|...+..++-+.+.+..++--.. .+..|.-..+-..-..+.+. .+.++...++ .-.++....+..+++.
T Consensus 218 rg~~~a~~~~Wg~V~a~~~t~iv~rsn~l~~~~~~~pv~~~a~~~~~~~~~ll~~~~~------~~~~r~lv~r~~~k~g 291 (382)
T COG3268 218 RGRRLAPTLPWGFVAAAFNTTIVPRSNALEVWIYAAPVLALAGRGIGALLPLLGSAYV------RDLLRGLVLRVVPKPG 291 (382)
T ss_pred CCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHH------HHHHHHHHHEECCCCC
T ss_conf 7410175457055556640675466661223311268999988320112134323777------5666766521056889
Q ss_pred CCCCC---CCCEEEEEEEEEEEE-CCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH-HHHHHHCCC--CCCCCCC
Q ss_conf 56876---565179999999998-9967999998421153225755630456888899999-999998799--8778620
Q gi|254780742|r 306 SLAPN---YQGKTCIGCLINGIY-HGETREIFLYNICDHQNAYQEIASQGISYTAGTPPVA-TAILIAQGI--WDIGKMV 378 (419)
Q Consensus 306 ~~~~~---~~~~~~~~~~v~g~~-~g~~~~~~~~~~~~~~~~~~~~~~~am~~tTg~p~a~-aa~lil~g~--i~~~GV~ 378 (419)
.-+.. +++...+ +..++. .|++...++.+.. . ++.|++..+. ++.+.++.. ...+||+
T Consensus 292 ~GPt~e~qarg~~~~--~~~~~tatG~r~~ari~t~~------------~-y~stav~~a~~~l~~ald~~~~~~~gGv~ 356 (382)
T COG3268 292 TGPTEEAQARGRYTI--EGETTTATGERYTARITTDN------------D-YYSTAVLLAQAALALALDRDKLSEPGGVL 356 (382)
T ss_pred CCCCHHHHHCCCCEE--EEEEEECCCCCEEEEEECCC------------C-HHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 998989985075147--89987514783036883166------------1-37899999999999974588646788612
Q ss_pred CHHHCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 7788594899999996798099997
Q gi|254780742|r 379 NIEELPPKPFLGTLQRMGLATSLRT 403 (419)
Q Consensus 379 ~Pe~~~~~~fl~~L~~~Gi~~~v~~ 403 (419)
+|.....+.++++|...|..+.+.+
T Consensus 357 TPA~~lG~dlv~rLp~aGv~~~~~~ 381 (382)
T COG3268 357 TPAAALGADLVERLPGAGVTFGTTR 381 (382)
T ss_pred CHHHHHHHHHHHHCCCCCCEEECCC
T ss_conf 7578876789975656660221366
No 6
>pfam06408 consensus
Probab=99.56 E-value=4.2e-12 Score=100.54 Aligned_cols=239 Identities=16% Similarity=0.191 Sum_probs=147.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCC-CCEEEEEECCHHHHH-HHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 3199984987799999999960898-725999639999999-99987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDI-LGDINIASRTLQKCS-KIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~-~~~i~va~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.+||++|+|.||+.+.-.|.+|.+. ..+|+|.|.+..+.. +.+.+ .++++++--+ .++.+.+++...
T Consensus 2 g~Iv~iGfGSIgq~~LPLl~rH~~~~~~~Itiid~~d~~~~~~~~~~----------~Gi~fi~~~l-T~eNy~~~L~~~ 70 (471)
T pfam06408 2 GPILMIGFGSIGRGTLPLIERHFKFDRSNIVVIDPRDTKKDRKLLAE----------KGIRFVQTAV-TKDNYKNVLDPL 70 (471)
T ss_pred CCEEEECCCHHHHHHHHHHHHHCCCCHHHEEEECCCCCHHHHHHHHH----------CCCEEEECCC-CHHHHHHHHHHH
T ss_conf 97799875716742067888760788789899767875456677875----------6976886145-878899999998
Q ss_pred -----CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCC--CCHH------CCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf -----97299973761003278999986288689603664--2000------0144200003577510888851886995
Q gi|254780742|r 81 -----NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHE--SPLK------ICESPPWYNNYEWSLLDECRTKSITAIL 147 (419)
Q Consensus 81 -----~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~--~~~~------~~~~~~~~~~~~~~l~~~a~~ag~~~i~ 147 (419)
+-|++||++-.---..+++.|.++|+.|+|++-+. +... ...+.-+.++..+++.... ..|.++|.
T Consensus 71 L~~gg~gdflvnLSvniss~~ii~~C~e~GvlYldT~iEpW~g~y~d~~~~p~~RTnYalre~~r~~~~~~-~~GpTAv~ 149 (471)
T pfam06408 71 LKGGGGQGFCVNLSVDTSSLDLMRLCREHGVLYVDTVVEPWLGFYFDADADNEARTNYALRETVRELKRDW-PGGPTAVS 149 (471)
T ss_pred HHCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC-CCCCEEEE
T ss_conf 62677788799801157889999999980987755440356886667779855666699999999999657-99980777
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCC------------------------CCEEEEEECCCC--CCCC---CCCCCCCHHHHH
Q ss_conf 37501114889999999974366------------------------638976302478--8886---665425689988
Q gi|254780742|r 148 GAGFDPGVVNAFARLAQDEYFDK------------------------ITDIDIIDVNAG--KHDK---YFATNFDAEINL 198 (419)
Q Consensus 148 ~~G~~PGl~~lla~~~~~~~~d~------------------------~~~i~~~~~~~~--~~~~---~~~~~~s~~~~l 198 (419)
+||..||+.+.+++.+.-.+-.. +..|++...-.. ..|. -+--+||.++.+
T Consensus 150 ~hGANPGlVShfvKqaLldiA~~~~~~~~~p~~~~r~~wa~LA~~LgVkvIHiaERDTQ~s~~PK~~~eFvNTWSveGF~ 229 (471)
T pfam06408 150 TCGANPGMVSWFVKQALVDLAADLGLDNSEPSNDDREGWAKLAKKLGVKGIHIAERDTQRASDPKPVNEFVNTWSVEGFI 229 (471)
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCHHHHH
T ss_conf 46899518999999999999998644567887413688999999829958995141132347899889445466211146
Q ss_pred HHCCCCEEEE---------------ECC---EEEEECCCCCCEEEE-CCCCCCCEEEEECCCCHHHHHHCCCCC
Q ss_conf 6225982999---------------999---589954677526897-788776403640484234565348663
Q gi|254780742|r 199 REFTGVVYSW---------------QKN---QWCVNKMFEISRTYD-LPTVGQHKVYLSGHDEIHSLFKNIQGA 253 (419)
Q Consensus 199 ~~~~~~~~~~---------------~~G---~~~~~~~~~~~~~~~-fp~~g~~~~~~~~~~e~~tl~~~~~~~ 253 (419)
++-..|+..= .+| .+....|...+..-+ .|..|....+...|.|.+++...+...
T Consensus 230 ~EG~qPAElGWGTHE~~~P~~a~~h~~G~~~~I~l~~pG~~T~VrSW~P~~g~~~G~lI~H~Ea~sI~d~lTv~ 303 (471)
T pfam06408 230 EEGLQPAELGWGTHETWMPKNAKKHKKGPKAAIYLPQPGANTRVRSWCPTLGAQYGFLVTHNEAISISDFLTVR 303 (471)
T ss_pred HHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCEEHHHEEEEC
T ss_conf 53675242053346543687764478898746887488646469875589885267998556301520236742
No 7
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=98.92 E-value=7.9e-08 Score=71.64 Aligned_cols=144 Identities=15% Similarity=0.222 Sum_probs=102.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 97319998498779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.| |-++|+|.+|+.+++.|.+......-..|.+|+.++++.++..... .. +.+.+ ++++
T Consensus 1 M~r-VgiIG~GaIG~~Va~~l~~g~~~~~L~~V~~r~~~~a~~~a~~~~~----------~~----~~~ld---~l~~-- 60 (265)
T PRK13304 1 MLK-IGIVGCGAIANLITKAIDSGRINAELLAFYDRNLEKAENLAEKTGA----------PA----CLSID---ELVK-- 60 (265)
T ss_pred CCE-EEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCC----------CC----CCCHH---HHHH--
T ss_conf 949-9998657899999999867998649999978987898877641599----------71----27989---9833--
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH
Q ss_conf 97299973761003278999986288689603664200001442000035775108888518869953750111488999
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAFA 160 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~lla 160 (419)
++|+||-|+++..-......++++|+|++-+|--- .. -.....++-+.|++.|..+..-.|.-.|++.+-+
T Consensus 61 ~~DlVVE~A~~~av~~~~~~~L~~G~dlvv~SvGA-La--------D~~l~~~L~~~A~~~g~~i~ipsGAigGlD~l~a 131 (265)
T PRK13304 61 DVDLVVECASQKAVEDTVPKSLNNGKDVIIMSVGA-LA--------DKELFLKLYKLAKENGCKIYLPSGAIAGIDGIKA 131 (265)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCCEEEECHHH-HC--------CHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH
T ss_conf 89999989898999999999997599899981368-55--------9899999999997379779982613442788999
Q ss_pred HHHHHHHCCCCCEEEEEE
Q ss_conf 999997436663897630
Q gi|254780742|r 161 RLAQDEYFDKITDIDIID 178 (419)
Q Consensus 161 ~~~~~~~~d~~~~i~~~~ 178 (419)
. . ...++++.+..
T Consensus 132 a---~--~~~l~~V~~~t 144 (265)
T PRK13304 132 A---S--LGEIESVTLTT 144 (265)
T ss_pred H---H--CCCCCEEEEEE
T ss_conf 8---6--58975799998
No 8
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.90 E-value=2e-08 Score=75.71 Aligned_cols=127 Identities=27% Similarity=0.338 Sum_probs=90.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.|+|+|+|+|+++++++..|....- .+|.|..||.+|++++++.+..... ... ..+ ...... +
T Consensus 19 ~k~vlIlGaGGaarai~~aL~~~g~--~~I~i~nR~~~r~~~l~~~~~~~~~-------~~~---~~~---~~~~~~--~ 81 (155)
T cd01065 19 GKKVLILGAGGAARAVAYALAELGA--AKIVIVNRTLEKAKALAERFGELGI-------AIA---YLD---LEELLA--E 81 (155)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHCCC-------CEE---ECC---HHHHHC--C
T ss_conf 9999998675899999999997199--8228860899999999998501366-------401---045---344315--6
Q ss_pred CCEEEECCCCCC----CHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
Q ss_conf 729997376100----3278999986288689603664200001442000035775108888518869953750111488
Q gi|254780742|r 82 SQIIINVGSSFL----NMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVN 157 (419)
Q Consensus 82 ~dvVin~~~p~~----~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ 157 (419)
+|+||||.|--+ ..++-..-+..+...+|+.|..... .+-..|++.|..++.|. +
T Consensus 82 ~dliIN~tp~G~~~~~~~p~~~~~~~~~~~~~D~iY~P~~T--------------~ll~~a~~~g~~~i~Gl-------~ 140 (155)
T cd01065 82 ADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLET--------------PLLKEARALGAKTIDGL-------E 140 (155)
T ss_pred CCEEEECCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCC--------------HHHHHHHHCCCEEECCH-------H
T ss_conf 88798767787778776767887759986898653178788--------------99999999839587739-------9
Q ss_pred HHHHHHHHH
Q ss_conf 999999997
Q gi|254780742|r 158 AFARLAQDE 166 (419)
Q Consensus 158 lla~~~~~~ 166 (419)
|+..+++.+
T Consensus 141 Mli~Qa~~~ 149 (155)
T cd01065 141 MLVYQAAEA 149 (155)
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 9
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.89 E-value=2.8e-08 Score=74.65 Aligned_cols=83 Identities=16% Similarity=0.287 Sum_probs=69.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.|+|||.|| .++|+.+++.|+++.. ++++.+|+.+++++++++++. .++....+|+.|.+++.++++.
T Consensus 1 M~~~VlITGassGIG~a~A~~la~~G~---~v~l~~R~~~~L~~~~~~~~~-------~~~~~~~~Dv~d~~~~~~~~~~ 70 (256)
T PRK07024 1 MPLKVFITGASSGIGQALAREYARQGA---TLGLVARRTDALQAFAARLPK-------ARVSVYAADVRDADALAAAAAD 70 (256)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCCC-------CCEEEEEECCCCHHHHHHHHHH
T ss_conf 999899984602999999999998899---899998988999999997679-------9769998117999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. ..|++||.+|-..
T Consensus 71 ~~~~~g~iDilinNAGi~~ 89 (256)
T PRK07024 71 FIAAHGCPDVVIANAGISV 89 (256)
T ss_pred HHHHHCCCCEEEECCCCCC
T ss_conf 9998399879998885567
No 10
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=98.85 E-value=5.1e-07 Score=66.18 Aligned_cols=150 Identities=12% Similarity=0.095 Sum_probs=100.1
Q ss_pred CCCEEEEECCCHH-HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849877-999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGAGGV-AHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~GaG~v-G~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|+.+|.|+|+|++ ++..+..+....+...-+.++|||.++++++++.++.. - ...++.+++.+
T Consensus 2 ~~irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~-------------~---~~~~~~~ll~~ 65 (342)
T COG0673 2 KMIRVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIA-------------K---AYTDLEELLAD 65 (342)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCC-------------C---CCCCHHHHHCC
T ss_conf 9327999898767888889999738874699999649989999999981997-------------4---52999999459
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
Q ss_conf 39729997376100327899998628868960366420000144200003577510888851886995375011148899
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAF 159 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ll 159 (419)
...|+|+.+.|+.+|..++.+|+++|+|.+.==- . ..-.....++-+.|+++|+.+..+.-.---+.-.-
T Consensus 66 ~~iD~V~Iatp~~~H~~~a~~AL~aGkhVl~EKP---l-------a~t~~ea~~l~~~a~~~g~~l~v~~~~Rf~p~~~~ 135 (342)
T COG0673 66 PDIDAVYIATPNALHAELALAALEAGKHVLCEKP---L-------ALTLEEAEELVELARKAGVKLMVGFNRRFDPAVQA 135 (342)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC---C-------CCCHHHHHHHHHHHHHCCCEEEEEEHHHCCHHHHH
T ss_conf 9998899969806779999999977996999289---9-------89999999999999975994999884654989999
Q ss_pred HHHHHHHHCCCCCEEEEEE
Q ss_conf 9999997436663897630
Q gi|254780742|r 160 ARLAQDEYFDKITDIDIID 178 (419)
Q Consensus 160 a~~~~~~~~d~~~~i~~~~ 178 (419)
++.++++ ++++.+....
T Consensus 136 ~k~li~~--g~iG~i~~~~ 152 (342)
T COG0673 136 LKELIDS--GALGEVVSVQ 152 (342)
T ss_pred HHHHHHC--CCCCCEEEEE
T ss_conf 9999865--9874159999
No 11
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=98.85 E-value=5.1e-08 Score=72.94 Aligned_cols=127 Identities=17% Similarity=0.267 Sum_probs=90.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.|+++|+|||+++++++..|....- .++.|.+|+.++++++++++... +... +.+.+..... +
T Consensus 122 ~k~vlIlGaGGaarai~~al~~~g~--~~i~i~nR~~~~a~~l~~~~~~~--------~~~~-----~~~~~~~~~~--~ 184 (275)
T PRK00258 122 GKRILLLGAGGAARAVILPLLELGV--AEITIVNRTVERAEELAELFGEG--------VQAL-----GLDELAGELA--D 184 (275)
T ss_pred CCEEEEECCCCHHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHCCC--------CCEE-----EHHHHHHCCC--C
T ss_conf 8759998887107999999997699--98999958999999999983567--------6275-----3787543044--5
Q ss_pred CCEEEECCCCCCC---HHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHH
Q ss_conf 7299973761003---2789999862886896036642000014420000357751088885188699537501114889
Q gi|254780742|r 82 SQIIINVGSSFLN---MSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNA 158 (419)
Q Consensus 82 ~dvVin~~~p~~~---~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~l 158 (419)
+|+||||.|--+. .++....+..+...+|+.|..... .|-..|+++|..++.|. +|
T Consensus 185 ~diiInaTp~Gm~~~~~~~~~~~~~~~~~v~D~~Y~P~~T--------------~ll~~a~~~G~~~i~Gl-------~M 243 (275)
T PRK00258 185 FDLIINTTSAGMSGELPPLPASLLRPGTVVYDMIYGPLPT--------------PFLAWAKAQGARTVDGL-------GM 243 (275)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCC--------------HHHHHHHHCCCEEECCH-------HH
T ss_conf 7779965777777886511387648886699866579999--------------99999998829485779-------99
Q ss_pred HHHHHHHH
Q ss_conf 99999997
Q gi|254780742|r 159 FARLAQDE 166 (419)
Q Consensus 159 la~~~~~~ 166 (419)
+..+++.+
T Consensus 244 li~Qa~~q 251 (275)
T PRK00258 244 LVHQAAEA 251 (275)
T ss_pred HHHHHHHH
T ss_conf 99999999
No 12
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.80 E-value=1.2e-07 Score=70.42 Aligned_cols=87 Identities=16% Similarity=0.242 Sum_probs=73.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.|.+||.|+ +++|+.+++.|+++.- +++++||+.++++++++++..... ..++...++|+.|.+++.++++.
T Consensus 1 mnKvalITG~s~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~ 74 (259)
T PRK12384 1 MNKVAVVIGGGQTLGAFLCHGLAEEGY---RVAVADINSEKAANVAQEINAEYG---EGMAYGFGADATSEQSVLALSRG 74 (259)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHCC---CCEEEEEECCCCCHHHHHHHHHH
T ss_conf 997899946886899999999998799---999997988999999999986248---86089998327999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||++|...
T Consensus 75 ~~~~~G~iDilVnnAG~~~ 93 (259)
T PRK12384 75 VDEIFGRVDLLVYSAGIAK 93 (259)
T ss_pred HHHHHCCCCEEEECCCCCC
T ss_conf 9998299719998997778
No 13
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.79 E-value=1.1e-07 Score=70.74 Aligned_cols=85 Identities=18% Similarity=0.280 Sum_probs=69.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
||+|||.|| .++|+.+++.|+++.. ++++++|+.++++++++++....+ ..++.+..+|+.|.+++.+++.+.
T Consensus 2 ~K~vlITGAssGIG~alA~~la~~G~---~v~l~~r~~~~l~~~~~el~~~~~---~~~v~~~~~Dvsd~~~v~~~~~~~ 75 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR---DLALCARRTDRLEELKAELLARYP---GIKVAVAALDVNDHDQVFEVFAEF 75 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHCC---CCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 99899947863999999999998799---899998988899999999987379---973999978678689999999999
Q ss_pred -----CCCEEEECCCCC
Q ss_conf -----972999737610
Q gi|254780742|r 81 -----NSQIIINVGSSF 92 (419)
Q Consensus 81 -----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 76 ~~~~g~iD~lvnNAGi~ 92 (248)
T PRK08251 76 SDELGGLDRVIVNAGIG 92 (248)
T ss_pred HHHHCCCCEEEECCCCC
T ss_conf 99809998999857657
No 14
>PRK11579 putative oxidoreductase; Provisional
Probab=98.79 E-value=4.8e-07 Score=66.34 Aligned_cols=143 Identities=11% Similarity=0.062 Sum_probs=94.5
Q ss_pred CCC--EEEEECCCHHHHH-HHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 973--1999849877999-9999996089872599963999999999987343024555557308994378989999999
Q gi|254780742|r 1 MKK--NVLIIGAGGVAHV-VAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELI 77 (419)
Q Consensus 1 M~k--~ilv~GaG~vG~~-~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~ 77 (419)
|.| +|-|+|+|.+|+. -+..|....+. .-+.|+|+|.+|+++- . ..+.+ ..| +.+++
T Consensus 1 M~~~irvgiiG~G~~~~~~h~~~~~~~~~~-~l~av~d~~~~~~~a~---~---------~~~~~----~~~---~~~ll 60 (346)
T PRK11579 1 MSDKIRVGLIGYGYASKTFHAPLIAGTPGL-ELAAVSSSDETKVKAD---W---------PTVTV----VSE---PKHLF 60 (346)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCE-EEEEEECCCHHHHHCC---C---------CCCCE----ECC---HHHHH
T ss_conf 998875999936299999999999629991-9999979899999502---5---------89953----899---99994
Q ss_pred HHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECC--CHHHHH
Q ss_conf 753972999737610032789999862886896036642000014420000357751088885188699537--501114
Q gi|254780742|r 78 KKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGA--GFDPGV 155 (419)
Q Consensus 78 ~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~--G~~PGl 155 (419)
.+...|+|+.|.|+.+|.+++.+|+++|+|.+.== +.. .-.....++-+.|+++|+.+..+. =++|.+
T Consensus 61 ~~~~id~V~i~tp~~~H~~~~~~al~aGkhv~~EK---P~a-------~~~~~a~~l~~~a~~~g~~l~v~~~~R~~~~~ 130 (346)
T PRK11579 61 NDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDK---PFT-------VTLSQARELDALAKSLGRVLSVFHNRRWDSDF 130 (346)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEECC---CCC-------CCHHHHHHHHHHHHHCCCEEEEEEEECCCHHH
T ss_conf 59999999997996789999999998799489538---767-------87999999999998729679996553189899
Q ss_pred HHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 8899999999743666389763
Q gi|254780742|r 156 VNAFARLAQDEYFDKITDIDII 177 (419)
Q Consensus 156 ~~lla~~~~~~~~d~~~~i~~~ 177 (419)
-. ++.++++ +++++|...
T Consensus 131 ~~--~~~~i~~--G~lG~i~~~ 148 (346)
T PRK11579 131 LT--LKGLLAE--GVLGEVAYF 148 (346)
T ss_pred HH--HHHHHHC--CCCCCEEEE
T ss_conf 99--8778757--997853899
No 15
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=98.79 E-value=1.2e-06 Score=63.58 Aligned_cols=142 Identities=16% Similarity=0.198 Sum_probs=103.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
-+|-|+|+|.+|+.+++.|.+..+...-..|.+|++++...+.+.++... . +.+.+ ++.. ++
T Consensus 7 mrVgliG~GaIG~~va~~l~~g~~~~~l~~V~~r~~~~~~~~~~~~~~~~----------~---~~~~~---~l~~--~~ 68 (271)
T PRK13302 7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPP----------P---VVPLD---QLAT--HA 68 (271)
T ss_pred CEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCC----------C---CCCHH---HHHH--CC
T ss_conf 77999886789999999997589981899999288788899987358987----------4---07889---9601--89
Q ss_pred CEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHH
Q ss_conf 29997376100327899998628868960366420000144200003577510888851886995375011148899999
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAFARL 162 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~lla~~ 162 (419)
|+||-|+++..-......++++|+|++-+|--- +. + ...+-+.|++.|..+..-.|.-.|++.+-+.
T Consensus 69 DlVVE~A~~~av~~~~~~~L~~G~dlvv~SvGA--La---------d-~~~l~~~A~~~g~~i~ipsGAigGlD~l~aa- 135 (271)
T PRK13302 69 DIVVEAAPASVLRAIVEPVLAAGKKAIVLSVGA--LL---------R-NEDLIDLARQNGGQIIVPTGALLGLDAVTAA- 135 (271)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCEEEECHHH--HC---------C-CHHHHHHHHHCCCEEEEECCHHHHHHHHHHH-
T ss_conf 999989898999999999997599789975579--56---------9-2999999996698599807034347899998-
Q ss_pred HHHHHCCCCCEEEEEEC
Q ss_conf 99974366638976302
Q gi|254780742|r 163 AQDEYFDKITDIDIIDV 179 (419)
Q Consensus 163 ~~~~~~d~~~~i~~~~~ 179 (419)
. .+.++++.+...
T Consensus 136 --~--~~~l~~V~~~t~ 148 (271)
T PRK13302 136 --A--EGTIHSVKMITR 148 (271)
T ss_pred --H--CCCCCEEEEEEE
T ss_conf --6--289847999963
No 16
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.78 E-value=8.3e-07 Score=64.72 Aligned_cols=163 Identities=16% Similarity=0.091 Sum_probs=114.5
Q ss_pred CCEEEEECCCH-HHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 73199984987-79999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGAGG-VAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~GaG~-vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.|||-|+|| +|+.+++.+++..+ .+|.+-|||+-++-.+..++....+ ..++...-.|+.|.+.+.+.++++
T Consensus 250 gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~~~i~~el~~~~~---~~~~~~~igdVrD~~~~~~~~~~~ 324 (588)
T COG1086 250 GKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLYLIDMELREKFP---ELKLRFYIGDVRDRDRVERAMEGH 324 (588)
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCC--CEEEEECCCHHHHHHHHHHHHHHCC---CCCEEEEECCCCCHHHHHHHHHCC
T ss_conf 98899968987367999999985498--7899961763779999999986278---751689963534689999998638
Q ss_pred CCCEEEECCCCCC------C------------HHHHHHHHHCCCCEEE-ECCCCCCHHCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 9729997376100------3------------2789999862886896-0366420000144200003577510888851
Q gi|254780742|r 81 NSQIIINVGSSFL------N------------MSVLRACIDSNVAYID-TAIHESPLKICESPPWYNNYEWSLLDECRTK 141 (419)
Q Consensus 81 ~~dvVin~~~p~~------~------------~~v~~a~i~~g~hyvD-~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~a 141 (419)
++|+|.+++-..+ + ..+++||+++|+..+- +|- + +
T Consensus 325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iST--D------------------------K 378 (588)
T COG1086 325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIST--D------------------------K 378 (588)
T ss_pred CCCEEEEHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC--C------------------------C
T ss_conf 8866887555536863101889999872173899999999839778999705--8------------------------6
Q ss_pred CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 88699537501114889999999974366638976302478888666542568998862
Q gi|254780742|r 142 SITAILGAGFDPGVVNAFARLAQDEYFDKITDIDIIDVNAGKHDKYFATNFDAEINLRE 200 (419)
Q Consensus 142 g~~~i~~~G~~PGl~~lla~~~~~~~~d~~~~i~~~~~~~~~~~~~~~~~~s~~~~l~~ 200 (419)
-+.=.+-||..=-+..++...+.++..+. ++.-+.+.++...++. .|..-.|..
T Consensus 379 AV~PtNvmGaTKr~aE~~~~a~~~~~~~~-~T~f~~VRFGNVlGSr----GSViPlFk~ 432 (588)
T COG1086 379 AVNPTNVMGATKRLAEKLFQAANRNVSGT-GTRFCVVRFGNVLGSR----GSVIPLFKK 432 (588)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCC-CCEEEEEEECCEECCC----CCCHHHHHH
T ss_conf 66884176688999999999974104888-8579999825454588----777788999
No 17
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=98.76 E-value=8.6e-08 Score=71.38 Aligned_cols=130 Identities=12% Similarity=0.143 Sum_probs=90.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.++++|+|+|+.++.++..|.+..- .+++|.+|+.+|++++++.+...... ... .....+...+. .
T Consensus 127 ~~~vlilGaGGaa~ai~~al~~~g~--~~i~I~nR~~~r~~~l~~~l~~~~~~-----~~~-----~~~~~~~~~~~--~ 192 (284)
T PRK12549 127 LERVVQLGAGGAGAAVAHALLTLGV--ERLTLFDVDPARAQALADELNARFPA-----ARV-----TAGSDLAAALA--A 192 (284)
T ss_pred CCEEEEECCCCHHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHHCCC-----CEE-----EECHHHHHHHH--H
T ss_conf 5718996566168999999997699--98999979889999999999865798-----637-----64167676542--1
Q ss_pred CCEEEECCCCCC----CHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
Q ss_conf 729997376100----3278999986288689603664200001442000035775108888518869953750111488
Q gi|254780742|r 82 SQIIINVGSSFL----NMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVN 157 (419)
Q Consensus 82 ~dvVin~~~p~~----~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ 157 (419)
+|+||||.|.-+ ..++-...+....-.+|+.|...++ .|-..|+++|..++.|. +
T Consensus 193 ~d~iINaTp~Gm~~~~~~p~~~~~l~~~~~v~D~vY~P~~T--------------~ll~~A~~~G~~~i~Gl-------~ 251 (284)
T PRK12549 193 ADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLET--------------ELLRAARALGCRTLDGG-------G 251 (284)
T ss_pred CCEEEECCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCC--------------HHHHHHHHCCCEEECCH-------H
T ss_conf 38266578988778999999988918787567612077457--------------99999998859077839-------9
Q ss_pred HHHHHHHHH
Q ss_conf 999999997
Q gi|254780742|r 158 AFARLAQDE 166 (419)
Q Consensus 158 lla~~~~~~ 166 (419)
|+..+++.+
T Consensus 252 MLv~Qa~~q 260 (284)
T PRK12549 252 MAVFQAVDA 260 (284)
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 18
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=98.76 E-value=2.8e-07 Score=67.95 Aligned_cols=132 Identities=14% Similarity=0.174 Sum_probs=91.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHH-HHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 973199984987799999999960898725999639999-9999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQ-KCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|+++|-++|+|.+|+.++..|........+++.-.|+.. ..++++ .+... ..+.+ +++..
T Consensus 1 M~~rVgiiG~GAIG~~Va~~l~~~~~~~~~l~~~~~~~~~~~~~~~------------~~~~~----~~~~~---~lla~ 61 (267)
T PRK13301 1 MTHRIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALA------------GRVAL----LDGLP---GLLAW 61 (267)
T ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHC------------CCCCC----CCCHH---HHHCC
T ss_conf 9517999851699999999986177765289998153355555532------------56654----57757---77412
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
Q ss_conf 39729997376100327899998628868960366420000144200003577510888851886995375011148899
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAF 159 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ll 159 (419)
++|+||-|+++.--...+..++++|++++-+|--- +. -.....++.+.|++.|..+..-.|.-.|++.+-
T Consensus 62 -~pDlVvE~As~~Av~~~a~~vL~~G~dlvv~SvGA--La-------D~~l~~~l~~~A~~~g~~i~ipsGAIgGlD~l~ 131 (267)
T PRK13301 62 -RPDLVVEAAGQQAIAEHAEGCLTAGLDMIICSAGA--LA-------DDALRARLIAAAEAGGARIRVPAGAIAGLDYLQ 131 (267)
T ss_pred -CCCEEEECCCHHHHHHHHHHHHHCCCCEEEECHHH--HC-------CHHHHHHHHHHHHHCCCEEEECCCHHHCHHHHH
T ss_conf -89999989798999999999997599699982378--47-------988999999999977986997473010468999
Q ss_pred HH
Q ss_conf 99
Q gi|254780742|r 160 AR 161 (419)
Q Consensus 160 a~ 161 (419)
+.
T Consensus 132 aa 133 (267)
T PRK13301 132 AV 133 (267)
T ss_pred HH
T ss_conf 87
No 19
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.75 E-value=1.8e-07 Score=69.28 Aligned_cols=82 Identities=17% Similarity=0.255 Sum_probs=69.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|+|.++|-|| +++|+.+++.|+++.. ++++.+|+.++++++.+..+ .++...++|+.|.+++.+++++
T Consensus 1 M~Kv~lITGaSsGiG~ala~~l~~~G~---~Vi~t~R~~~~l~~l~~~~~--------~~~~~~~~Dvt~~~~v~~~v~~ 69 (276)
T PRK06482 1 MTKTWFITGASSGFGRGLTERLLARGD---RVAATVRRPDALDDLKARYG--------ERLWVLQLDVTDTAAVRAVVDR 69 (276)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCC--------CCEEEEEEECCCHHHHHHHHHH
T ss_conf 997899915865999999999998899---89999789899999998669--------9579999537999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||.+|..+
T Consensus 70 ~~~~~G~iDvLVNNAG~~~ 88 (276)
T PRK06482 70 AFAELGRIDVVVSNAGYGL 88 (276)
T ss_pred HHHHCCCCCEEEECCCCCC
T ss_conf 9998099878874687778
No 20
>PRK08643 acetoin reductase; Validated
Probab=98.74 E-value=2.6e-07 Score=68.17 Aligned_cols=85 Identities=18% Similarity=0.295 Sum_probs=71.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.|.+||.|+ +++|+.++..|++..- ++++.|||.++++++++++.... .+....++|+.|.+++.+++.+
T Consensus 1 mnKvalVTGg~~GIG~aia~~la~~Ga---~V~i~d~~~~~~~~~~~~~~~~~-----~~~~~~~~Dvt~~~~v~~~~~~ 72 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLVEDGF---KVAIVDYNEETAKAAADKLSSDG-----GKAIAVKADVSNRDQVFDAVQQ 72 (256)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHHH
T ss_conf 984999957578899999999998799---99999698899999999998539-----9099998058999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||.+|-..
T Consensus 73 ~~~~~G~iDiLVNnAG~~~ 91 (256)
T PRK08643 73 VVDTFGDLNVVVNNAGLAP 91 (256)
T ss_pred HHHHHCCCCEEEECCCCCC
T ss_conf 9998299879998998899
No 21
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.72 E-value=1.1e-06 Score=63.84 Aligned_cols=138 Identities=17% Similarity=0.257 Sum_probs=91.3
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 1999849-877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+|||+|| |.+|+.+++.|.++.. ++.+.-||++++..+.. ..++....|..|++++.+.++ ++
T Consensus 2 ~ILV~GATG~lGr~vVr~Ll~~G~---~Vr~lvRnp~ka~~l~~-----------~Gve~v~gDl~dpesl~~Al~--Gv 65 (319)
T CHL00194 2 SLLVIGATGTLGRQIVRRALDEGY---QVKCLVRNLRKAAFLKE-----------WGAELVYGDLSLPETIPPALE--GI 65 (319)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC---CEEEEECCHHHHHHHHH-----------CCCEEEEECCCCHHHHHHHHC--CC
T ss_conf 799989985899999999996889---08999578676323421-----------596799942788778999965--99
Q ss_pred CEEEECCCCCCC-------------HHHHHHHHHCCCC-EEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCC--EEE
Q ss_conf 299973761003-------------2789999862886-896036642000014420000357751088885188--699
Q gi|254780742|r 83 QIIINVGSSFLN-------------MSVLRACIDSNVA-YIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSI--TAI 146 (419)
Q Consensus 83 dvVin~~~p~~~-------------~~v~~a~i~~g~h-yvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~--~~i 146 (419)
|.||++.+..-. ..++++|.++|+. +|=+|........ ..+++ +.-....+..+++|+ +++
T Consensus 66 daVi~~~~~~~~~~~~~~~vd~~g~~~li~AAk~aGVkr~V~lS~lga~~~~--~~p~~-~~K~~~E~~L~~Sgl~~TIl 142 (319)
T CHL00194 66 TAIIDASTSRPSDLNNAYQIDLEGKLALIEAAKAAKVKRFIFFSILNAEQYP--QVPLM-KIKSDIEEKLKQSGINYTIF 142 (319)
T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC--CCHHH-HHHHHHHHHHHHCCCCEEEE
T ss_conf 6799945667788620889889889999999998499889996135666688--75677-87999999998679985998
Q ss_pred ECCCHHHHHHHHHH
Q ss_conf 53750111488999
Q gi|254780742|r 147 LGAGFDPGVVNAFA 160 (419)
Q Consensus 147 ~~~G~~PGl~~lla 160 (419)
--+++.-++.+.++
T Consensus 143 RPs~F~q~l~~~~a 156 (319)
T CHL00194 143 RLAGFFQGLISQYA 156 (319)
T ss_pred CCHHHHHHHHHHHH
T ss_conf 47399998899876
No 22
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.71 E-value=3.5e-07 Score=67.29 Aligned_cols=84 Identities=20% Similarity=0.269 Sum_probs=69.4
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
+|.+||-|| +++|+.++..|+++. .++++.+|+.++++++++++... ..++....+|+.|++++.++++..
T Consensus 6 mKvalITGas~GIG~a~A~~la~~G---~~V~l~~R~~~~l~~~~~e~~~~-----g~~~~~~~~Dvt~~~~v~~~~~~~ 77 (241)
T PRK07454 6 MPTALITGASRGIGKATALAFAKAG---WDLALVARSQDALEALAEELRST-----GVKVAAYSIDLSNPEAIAPGIAEL 77 (241)
T ss_pred CCEEEECCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHC-----CCCEEEEEEECCCHHHHHHHHHHH
T ss_conf 9889991758789999999999879---98999989999999999999965-----992899995189999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 78 ~~~~G~iDiLVnNAG~~~ 95 (241)
T PRK07454 78 LEQFGCPSVLINNAGAAY 95 (241)
T ss_pred HHHCCCCCEEEECCCCCC
T ss_conf 997599889998898899
No 23
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.71 E-value=2.6e-07 Score=68.13 Aligned_cols=86 Identities=17% Similarity=0.224 Sum_probs=72.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.+.+||-|| +++|...++.|+++.. ++++.+|+.+|++++++++..... ..+++..+|..+++++..+...
T Consensus 5 ~~~~~lITGASsGIG~~~A~~lA~~g~---~liLvaR~~~kL~~la~~l~~~~~----v~v~vi~~DLs~~~~~~~l~~~ 77 (265)
T COG0300 5 KGKTALITGASSGIGAELAKQLARRGY---NLILVARREDKLEALAKELEDKTG----VEVEVIPADLSDPEALERLEDE 77 (265)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHHC----CEEEEEECCCCCHHHHHHHHHH
T ss_conf 786799977886489999999997799---799996769999999999987308----6279997767883679999999
Q ss_pred -----CCCCEEEECCCCCC
Q ss_conf -----39729997376100
Q gi|254780742|r 80 -----TNSQIIINVGSSFL 93 (419)
Q Consensus 80 -----~~~dvVin~~~p~~ 93 (419)
...|++||.+|.-.
T Consensus 78 l~~~~~~IdvLVNNAG~g~ 96 (265)
T COG0300 78 LKERGGPIDVLVNNAGFGT 96 (265)
T ss_pred HHHCCCCCCEEEECCCCCC
T ss_conf 9824885238997787477
No 24
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.69 E-value=3e-07 Score=67.70 Aligned_cols=84 Identities=17% Similarity=0.396 Sum_probs=70.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
+|.+||.|| +++|+.+++.|+++. .++++.+|+.++++++++++.... .......+|+.|.+++.++++..
T Consensus 10 ~KtAlVTGAssGIG~aiA~~la~~G---~~V~l~~R~~e~l~~~~~~l~~~g-----~~~~~~~~Dvtd~~~v~~~v~~~ 81 (275)
T PRK07775 10 RRPAIVAGASSGIGAATAIELAAHG---FPVALGARRVEKCEEIVDKIRADG-----GEAVAFPLDVTDPDSVKSFVAQA 81 (275)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHCC-----CCEEEEEECCCCHHHHHHHHHHH
T ss_conf 9979994623599999999999879---989999898999999999999649-----94899991289999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|...
T Consensus 82 ~~~~G~iDiLVnNAG~~~ 99 (275)
T PRK07775 82 TEALGDIEVLVSGAGDTY 99 (275)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998599659997675688
No 25
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.68 E-value=4.4e-07 Score=66.62 Aligned_cols=82 Identities=18% Similarity=0.214 Sum_probs=68.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.|.++|-|| .++|+.+++.|+++.. ++++.+|+.+++++++++++ .++....+|+.|.+++.+++++
T Consensus 2 ~gKv~lITGassGIG~a~A~~la~~G~---~Vv~~~R~~~~l~~l~~~~~--------~~~~~~~~Dvtd~~~v~~~v~~ 70 (275)
T PRK08263 2 MGKVWFITGASRGFGREWTEAALERGD---RVVATARDTATLADLAERYG--------DALLPLALDVTDRAAVFAAVEQ 70 (275)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCC--------CCEEEEEEECCCHHHHHHHHHH
T ss_conf 899899946743999999999998799---89999798999999999759--------9679999648999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||.+|...
T Consensus 71 ~~~~~G~iDiLVNNAG~~~ 89 (275)
T PRK08263 71 AVKHFGRLDIVVNNAGYGL 89 (275)
T ss_pred HHHHHCCCCEEEECCCCCC
T ss_conf 9998499878998886678
No 26
>pfam01408 GFO_IDH_MocA Oxidoreductase family, NAD-binding Rossmann fold. This family of enzymes utilize NADP or NAD. This family is called the GFO/IDH/MOCA family in swiss-prot.
Probab=98.67 E-value=8.4e-07 Score=64.68 Aligned_cols=118 Identities=12% Similarity=0.124 Sum_probs=85.7
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
+|.|+|+|.+|+.-++.+....+...-+.++|+|.++++.+++.+. ++.. . ++.++++..+.|
T Consensus 2 ki~iiG~G~~g~~~~~~~~~~~~~~~i~ai~d~~~~~~~~~~~~~~----------~~~~----~---~~~~~l~~~~iD 64 (120)
T pfam01408 2 RVGIVGAGKIGRRHLRALNESQDGAELVGVLDPDPARAEAVAESFG----------VPAY----S---DLEELLADPDVD 64 (120)
T ss_pred EEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHC----------CCEE----C---CHHHHHHCCCCC
T ss_conf 8999907799999999998559997899998299999999999839----------9678----8---699997377889
Q ss_pred EEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 99973761003278999986288689603664200001442000035775108888518869953
Q gi|254780742|r 84 IIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILG 148 (419)
Q Consensus 84 vVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~ 148 (419)
+|+.+.|+..|..++..|+++|+|.+--= | ...-.+...++-+.++++|+.+..+
T Consensus 65 ~v~I~tp~~~H~~~~~~~l~~g~~v~~EK---P-------~~~~~~e~~~l~~~a~~~~~~~~vg 119 (120)
T pfam01408 65 AVSVATPPGLHFELALAALEAGKHVLVEK---P-------LATTVEEAKELVELAEKKGVRLSVG 119 (120)
T ss_pred EEEECCCHHHHHHHHHHHHHHCCEEEEEC---C-------CCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 89990874618999999998199899968---9-------8199999999999999829969995
No 27
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.66 E-value=4.2e-07 Score=66.73 Aligned_cols=83 Identities=13% Similarity=0.236 Sum_probs=67.5
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|++||-|| +|+|+.+++.|+++.. ++++.|||.++++++++++..... .......+|+.|.+++.++++..
T Consensus 1 K~alITGassGIG~a~A~~la~~Ga---~v~l~~r~~~~l~~~~~~l~~~g~----~~~~~~~~Dvsd~~~v~~~~~~~~ 73 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA---ELFLTDRDADGLAQTVADARALGG----TVPEHRALDISDYDAVAAFAADIH 73 (272)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCCC----CEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9799947201999999999998899---899998988999999999984589----714788566899999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 74 ~~~g~iDiLiNNAGi~ 89 (272)
T PRK07832 74 AAHPSMDVVMNIAGIS 89 (272)
T ss_pred HHCCCCCEEEECCCCC
T ss_conf 9729988899878768
No 28
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.66 E-value=5.7e-07 Score=65.86 Aligned_cols=83 Identities=19% Similarity=0.315 Sum_probs=69.7
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|| .++|+.+++.|+++.- ++++.|||.++++++++++.+.. .+.....+|+.|.+++.++++..
T Consensus 2 Kv~lITGassGIG~a~A~~la~~Ga---~vvl~~r~~~~l~~~~~~l~~~g-----~~~~~~~~Dvs~~~~~~~~~~~~~ 73 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA---RLVLAARNEERLASLAQELANYG-----AEALVVATDVSDAEACERLIEAAV 73 (263)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 9999958101999999999998799---89999889999999999999549-----967999807999999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 74 ~~~G~iDiLVNNAGi~~ 90 (263)
T PRK06181 74 AHFGGIDILVNNAGMTM 90 (263)
T ss_pred HHHCCCCEEEECCCCCC
T ss_conf 98299648998785678
No 29
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.65 E-value=5.6e-07 Score=65.91 Aligned_cols=83 Identities=16% Similarity=0.250 Sum_probs=66.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 973199984-9877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIG-AGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~G-aG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|+|+|+|+| ++++|+.+++.|++ . .+++++|||.++++++++++.... .++...++|+.|.+++.++++.
T Consensus 3 L~~kV~v~tGa~GIG~aiA~~la~-G---a~vvi~~~~~~~l~~~~~~l~~~g-----~~~~~~~~Dvs~~~~v~~l~~~ 73 (277)
T PRK06940 3 MSKEVVVVIGAGGMGQAIARRVGS-G---KTVLLADYNEENLQAVARTLREAG-----FDVITQQVDVSSRESVKALAQT 73 (277)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHH-C---CEEEEEECCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHHH
T ss_conf 899299997816999999999981-9---989999898899999999987228-----8299998257998999999999
Q ss_pred C----CCCEEEECCCCC
Q ss_conf 3----972999737610
Q gi|254780742|r 80 T----NSQIIINVGSSF 92 (419)
Q Consensus 80 ~----~~dvVin~~~p~ 92 (419)
. +.|++||.+|-.
T Consensus 74 ~~~~G~idiLVnnAG~~ 90 (277)
T PRK06940 74 AATLGAVTGLVHTAGVS 90 (277)
T ss_pred HHHHCCCCEEEECCCCC
T ss_conf 99869987999888678
No 30
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=98.65 E-value=3.4e-07 Score=67.37 Aligned_cols=128 Identities=22% Similarity=0.314 Sum_probs=89.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
++|+|+|||+.+++++..|++..- .+|+|+.|+.+|++++++.+..... .+.. .+..+.+.+. ..
T Consensus 127 ~~vlilGAGGAarAv~~aL~~~g~--~~i~V~NRt~~ra~~La~~~~~~~~-----~~~~--~~~~~~~~~~------~~ 191 (283)
T COG0169 127 KRVLILGAGGAARAVAFALAEAGA--KRITVVNRTRERAEELADLFGELGA-----AVEA--AALADLEGLE------EA 191 (283)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHHCC-----CCCC--CCCCCCCCCC------CC
T ss_conf 889998976899999999998699--8799995888999999998645056-----3110--2455412355------45
Q ss_pred CEEEECCCCCCCH-----HHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
Q ss_conf 2999737610032-----78999986288689603664200001442000035775108888518869953750111488
Q gi|254780742|r 83 QIIINVGSSFLNM-----SVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVN 157 (419)
Q Consensus 83 dvVin~~~p~~~~-----~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ 157 (419)
|++||+.+.-+.. .+-..++..+.=..|+-|....+ .|-+.|++.|..++.|.|
T Consensus 192 dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T--------------plL~~A~~~G~~~idGl~------- 250 (283)
T COG0169 192 DLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLET--------------PLLREARAQGAKTIDGLG------- 250 (283)
T ss_pred CEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCC--------------HHHHHHHHCCCCEECCHH-------
T ss_conf 78997887877788788888677668677899811188788--------------899999985990787399-------
Q ss_pred HHHHHHHHH
Q ss_conf 999999997
Q gi|254780742|r 158 AFARLAQDE 166 (419)
Q Consensus 158 lla~~~~~~ 166 (419)
|++.+++..
T Consensus 251 Mlv~Qaa~a 259 (283)
T COG0169 251 MLVHQAAEA 259 (283)
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 31
>COG5310 Homospermidine synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.64 E-value=3.1e-07 Score=67.64 Aligned_cols=238 Identities=18% Similarity=0.166 Sum_probs=135.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC-HHHHHHHHHHC
Q ss_conf 31999849877999999999608987-25999639999999999873430245555573089943789-89999999753
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDIL-GDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALN-IKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~-~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d-~~~l~~~~~~~ 80 (419)
-.|++||-|.+|+...-.|.++.+.+ .+++|-|-.. +..++.++-+- |+-...+.-.| .+-|..++++.
T Consensus 14 gpIimIGfGSigrgTLPLierhf~~d~~~~~viDp~e-k~~k~~~~~gi--------rfV~e~it~~Nyk~vL~pll~~~ 84 (481)
T COG5310 14 GPIIMIGFGSIGRGTLPLIERHFKFDRSRMVVIDPRE-KDRKILDERGI--------RFVQEAITRDNYKDVLKPLLKGV 84 (481)
T ss_pred CCEEEEEECCCCCCCCHHHHHHCCCCHHHEEEECHHH-HHHHHHHHHHH--------HHHHHHCCHHHHHHHHHHHHHCC
T ss_conf 8679994045456530667876278755548846057-77888876336--------99987618666999999986267
Q ss_pred C-CCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCC--CCHH-----CCCCCC-CCHHHHHHHHHHHHH-CCCEEEECCC
Q ss_conf 9-7299973761003278999986288689603664--2000-----014420-000357751088885-1886995375
Q gi|254780742|r 81 N-SQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHE--SPLK-----ICESPP-WYNNYEWSLLDECRT-KSITAILGAG 150 (419)
Q Consensus 81 ~-~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~--~~~~-----~~~~~~-~~~~~~~~l~~~a~~-ag~~~i~~~G 150 (419)
+ --++||..-..-...+++.|-++|+-|||+.-+. .+.. ...+.+ .++++ .+.++.++ -|.+++..||
T Consensus 85 ~gqgf~vnLSvd~~s~Dlmr~crk~~vLYidTvVEpW~gfyfDa~adn~artnyaLRet--~lrEk~r~pgg~TaVs~cG 162 (481)
T COG5310 85 GGQGFCVNLSVDTSSLDLMRLCRKHGVLYIDTVVEPWLGFYFDAQADNAARTNYALRET--VLREKRRNPGGPTAVSTCG 162 (481)
T ss_pred CCCEEEEEEEECCCHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH--HHHHHCCCCCCCEEEEECC
T ss_conf 88537999673366168999998768589842001355632102223355443799999--9998604989982565358
Q ss_pred HHHHHHHHHHHHHHHHHC-----C-------------------CCCEEEEEECCCC--CCCC---CCCCCCCHHHHHHHC
Q ss_conf 011148899999999743-----6-------------------6638976302478--8886---665425689988622
Q gi|254780742|r 151 FDPGVVNAFARLAQDEYF-----D-------------------KITDIDIIDVNAG--KHDK---YFATNFDAEINLREF 201 (419)
Q Consensus 151 ~~PGl~~lla~~~~~~~~-----d-------------------~~~~i~~~~~~~~--~~~~---~~~~~~s~~~~l~~~ 201 (419)
..||+...++.++.-.+- | .+..|++...... ..|. .+--+||.++.+.+-
T Consensus 163 ANPGmvswFVKqaLvdlAad~~ld~~ep~~ddr~gwAkLmkK~GVkgiHiaeRdTqra~~Pkp~n~fwntWsveGfi~EG 242 (481)
T COG5310 163 ANPGMVSWFVKQALVDLAADLGLDFEEPAQDDREGWAKLMKKAGVKGIHIAERDTQRAKKPKPFNGFWNTWSVEGFITEG 242 (481)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf 99328899999999988987476766796011678999999719866988750001378999876421330553210578
Q ss_pred CCCEEEEECCEEEEECCCC------CCEEE-------------ECCCCCCCEEEEECCCCHHHHHHCCC
Q ss_conf 5982999999589954677------52689-------------77887764036404842345653486
Q gi|254780742|r 202 TGVVYSWQKNQWCVNKMFE------ISRTY-------------DLPTVGQHKVYLSGHDEIHSLFKNIQ 251 (419)
Q Consensus 202 ~~~~~~~~~G~~~~~~~~~------~~~~~-------------~fp~~g~~~~~~~~~~e~~tl~~~~~ 251 (419)
..|+..+..-.-.-.|+.. .+-.+ ..|..|....+...|.|.+++...+.
T Consensus 243 ~qPaElgWGtHenw~pkn~~k~k~g~kaai~l~qpg~ntrvrswcp~~g~qyg~lvthneaisiad~ft 311 (481)
T COG5310 243 LQPAELGWGTHENWMPKNAKKQKKGNKAAIFLEQPGANTRVRSWCPTLGAQYGLLVTHNEAISIADFFT 311 (481)
T ss_pred CCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCEEEEEEEEE
T ss_conf 770332457742338865556877884258844899873221107996560448996375013011378
No 32
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF; InterPro: IPR012731 Members of the HesA/MoeB/ThiF family of proteins (IPR000594 from INTERPRO) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees. The Escherichia coli ThiF and MoeB proteins are seemingly more closely related than the E. coli ThiF and Campylobacter (for example) ThiF. This entry represents the more widely distributed clade of ThiF proteins as found in E. coli..
Probab=98.63 E-value=8.6e-07 Score=64.62 Aligned_cols=106 Identities=22% Similarity=0.351 Sum_probs=83.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECC---------------------HHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 731999849877999999999608987259996399---------------------99999999873430245555573
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRT---------------------LQKCSKIIDSIYKKKSLKIDGKL 60 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~---------------------~~~~~~~~~~l~~~~~~~~~~~~ 60 (419)
.++|||+|||+=|++++.||++-. + .+|+|.|.| ..|.+..++.+...++ +-++
T Consensus 21 ~s~VLiiGaGgLGs~~~~~LA~AG-V-G~i~i~D~D~V~~SNLqRQ~Lf~e~Dv~~~~pK~e~aa~~l~~LN~---~i~v 95 (210)
T TIGR02356 21 ASHVLIIGAGGLGSPAALYLAAAG-V-GTITIVDDDHVDLSNLQRQILFAEEDVGTLRPKVEAAAERLRELNS---DIRV 95 (210)
T ss_pred HCCEEEEEECHHHHHHHHHHHHCC-C-CEEEEEECCEECHHHCHHHHHHCHHHHHCCCHHHHHHHHHHHHHCC---CCEE
T ss_conf 086599972614568999998288-8-3789985167701012055430324420131589999999985388---9689
Q ss_pred EEEEECCCCHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECC
Q ss_conf 08994378989999999753972999737610-032789999862886896036
Q gi|254780742|r 61 AIHQVDALNIKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 61 ~~~~~D~~d~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~ 113 (419)
++.+-+++ .+.+..+++++.+|+||+|.=-| ..+.|=++|..++++||-.+-
T Consensus 96 ~a~~~~vt-~~~~~~~i~~~DPdlVlDc~DNf~tryliNdaC~~~~~PlI~aav 148 (210)
T TIGR02356 96 TALKERVT-AENLELLIENVDPDLVLDCTDNFATRYLINDACQALGIPLISAAV 148 (210)
T ss_pred EEEEECCC-HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 98542027-799999962389968961566877889999999984798699988
No 33
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.62 E-value=8.2e-07 Score=64.76 Aligned_cols=83 Identities=19% Similarity=0.301 Sum_probs=69.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||.|+ +++|+.+++.|+++.- ++++.|||.++++++.+++... ..++...++|+.|.+++.++++..
T Consensus 6 Kv~lITGgs~GIG~a~a~~la~~G~---~V~~~~r~~~~l~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (246)
T PRK05653 6 KTALVTGASRGIGRAIALRLAADGA---RVVIYDSNEEAAEALAEELRAA-----GGEAALLVFDVTDEAAVRALIEAAV 77 (246)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHC-----CCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 8899938975899999999998799---9999979999999999999965-----9948999972899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||++|.+.
T Consensus 78 ~~~g~iDilvnnAg~~~ 94 (246)
T PRK05653 78 ERFGGLDVLVNNAGITR 94 (246)
T ss_pred HHCCCCCEEEECCCCCC
T ss_conf 97499869998999999
No 34
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.62 E-value=5.1e-07 Score=66.14 Aligned_cols=81 Identities=11% Similarity=0.181 Sum_probs=67.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||-|+ +++|..+++.|+++.. ++++.|||.+++++++++++ .+....++|+.|.+++.++++..
T Consensus 9 gKvalITGassGIG~aiA~~la~~Ga---~Vvl~dr~~~~l~~~~~~lg--------~~~~~~~~DVtd~~~v~~~v~~i 77 (296)
T PRK05872 9 GKVVFVTGAARGVGAELARRLHARGA---KVALVDLEEAELAALAAELG--------DRVLTVVADVTDLAAMQAAAEEA 77 (296)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHC--------CCEEEEEEECCCHHHHHHHHHHH
T ss_conf 98799927105899999999998799---89999899999999999838--------87389998279999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 78 ~~~~G~iDiLVnNAGi~~ 95 (296)
T PRK05872 78 VERFGGIDVVVANAGIAS 95 (296)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 997199878765562579
No 35
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.61 E-value=7.4e-07 Score=65.06 Aligned_cols=84 Identities=23% Similarity=0.332 Sum_probs=69.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ .|+|+.+++.|+++.- ++++.+|+.++++++++++.... .......+|+.|.+++.++++..
T Consensus 41 KvaLITGassGIG~aiA~~la~~Ga---~Vvl~~R~~~~l~~~~~~i~~~g-----~~~~~~~~Dvtd~~~v~~~v~~~~ 112 (290)
T PRK05866 41 KRILLTGASSGIGEAAAEKFARRGA---TVVAVARRKDLLDAVADRITAAG-----GDAMAIPCDLSDLDAVDALVADVE 112 (290)
T ss_pred CEEEECCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9899908130999999999998699---89999899999999999999649-----908999778898999999999999
Q ss_pred ----CCCEEEECCCCCCC
Q ss_conf ----97299973761003
Q gi|254780742|r 81 ----NSQIIINVGSSFLN 94 (419)
Q Consensus 81 ----~~dvVin~~~p~~~ 94 (419)
+.|++||.+|-...
T Consensus 113 ~~~G~iDiLVNNAG~~~~ 130 (290)
T PRK05866 113 ERIGGVDILINNAGRSIR 130 (290)
T ss_pred HHHCCCCEEEECCCCCCC
T ss_conf 985998889975766678
No 36
>PRK07062 short chain dehydrogenase; Provisional
Probab=98.61 E-value=9.6e-07 Score=64.30 Aligned_cols=85 Identities=12% Similarity=0.210 Sum_probs=70.4
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||.|+ +++|+.+++.|+++. -+++++|||.+++++.++++..... ..++...++|+.|.+++.+++++.
T Consensus 9 K~alITG~s~GIG~a~a~~la~~G---a~Vvi~~r~~~~l~~~~~~l~~~~~---~~~~~~~~~Dvt~~~~v~~~v~~~~ 82 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAG---ASVAICGRDEERLASAEARLREKFP---GARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHHCC---CCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 989995757799999999999879---9999997988999999999987369---9659999757999999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|...
T Consensus 83 ~~~G~iDiLVnNAg~~~ 99 (265)
T PRK07062 83 ARFGGVDMLVNNAGQGR 99 (265)
T ss_pred HHHCCCCEEEECCCCCC
T ss_conf 98399888997788889
No 37
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.61 E-value=8.8e-07 Score=64.58 Aligned_cols=82 Identities=18% Similarity=0.291 Sum_probs=66.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH--
Q ss_conf 731999849-87799999999960898725999639999999999873430245555573089943789899999997--
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK-- 78 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-- 78 (419)
.|.|||.|| +++|+.+++.|+++.. ++++.+||.++++++++++.. .++....+|+.|.+++.++.+
T Consensus 5 ~K~vlITGassGIG~a~A~~la~~G~---~vil~~R~~~~L~~~~~~l~~-------~~~~~~~~Dls~~~~~~~~~~~~ 74 (262)
T PRK09072 5 DKRVLLTGASGGIGEALAEALCAAGA---RLLLVGRNAEKLEALAARPYP-------GRVRWVVADLTSEAGREAVLARA 74 (262)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHCC-------CCEEEEEEECCCHHHHHHHHHHH
T ss_conf 98899948623999999999998799---899998989999999998458-------97699997179999999999999
Q ss_pred -HC-CCCEEEECCCCCC
Q ss_conf -53-9729997376100
Q gi|254780742|r 79 -KT-NSQIIINVGSSFL 93 (419)
Q Consensus 79 -~~-~~dvVin~~~p~~ 93 (419)
++ +.|++||.+|-..
T Consensus 75 ~~~g~iDiLInNAG~~~ 91 (262)
T PRK09072 75 REMGGINVLINNAGVNH 91 (262)
T ss_pred HHHCCCCEEEECCCCCC
T ss_conf 98499989998997788
No 38
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.61 E-value=8.6e-07 Score=64.62 Aligned_cols=82 Identities=17% Similarity=0.177 Sum_probs=68.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||-|+ .++|+.+++.|+++.- ++++.+|+.++++++++++.. .++...++|+.|.+++.++++..
T Consensus 5 GKvalITGas~GIG~aiA~~la~~Ga---~V~i~~r~~~~l~~~~~~l~~-------~~~~~~~~Dv~d~~~v~~~v~~~ 74 (235)
T PRK07326 5 GKAALVTGGSKGIGFAVAEALAAAGY---RVAICARDESELEAAAQELGK-------RNVLGLACDVRDEADVRQAVDAH 74 (235)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHCC-------CCEEEEEEECCCHHHHHHHHHHH
T ss_conf 98999938267999999999998799---999998988999999998423-------98699996389999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 75 ~~~~G~iDiLVNNAGi~~ 92 (235)
T PRK07326 75 VEAFGGLDILVNNAGVGH 92 (235)
T ss_pred HHHCCCCEEEEECCCCCC
T ss_conf 998299669998887789
No 39
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=98.61 E-value=8.3e-07 Score=64.74 Aligned_cols=82 Identities=20% Similarity=0.329 Sum_probs=68.4
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|.+||-|+ +++|+.+++.|++..- ++++.||+.++++++++++.... .+....++|+.|.+++.++++..
T Consensus 10 gKvalVTGas~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~l~~~g-----~~~~~~~~Dvtd~~~v~~~~~~~ 81 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAGA---KVAILDRNQEKAEAVVEEIKANG-----GEAIALKADVLDKESLEQARQQI 81 (278)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHHHH
T ss_conf 99899958674899999999998799---89999798899999999998459-----90999982489999999999999
Q ss_pred -----CCCEEEECCCC
Q ss_conf -----97299973761
Q gi|254780742|r 81 -----NSQIIINVGSS 91 (419)
Q Consensus 81 -----~~dvVin~~~p 91 (419)
+.|++||.+|-
T Consensus 82 ~~~~G~iDiLVNnAG~ 97 (278)
T PRK08277 82 LKDFGRCDILINGAGG 97 (278)
T ss_pred HHHHCCCCEEEECCCC
T ss_conf 9984998889988987
No 40
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.61 E-value=9.7e-07 Score=64.28 Aligned_cols=84 Identities=14% Similarity=0.256 Sum_probs=69.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||-|+ +++|+.+++.|++... ++++.|||.++++++++++.... .+....+.|+.|.+++.+++++.
T Consensus 3 gKvalITG~s~GIG~aia~~la~~Ga---~V~i~~r~~~~~~~~~~~l~~~g-----~~~~~~~~Dv~d~~~v~~~v~~~ 74 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGA---KVAVFDLNREAAEKVAADIRAKG-----GNAQAFACDITDRDSVDTAVAAA 74 (250)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CCEEEEEECCCCHHHHHHHHHHH
T ss_conf 19999968576899999999998799---99999798899999999999539-----92899994489999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.++...
T Consensus 75 ~~~~G~iDilvnnAg~~~ 92 (250)
T TIGR03206 75 EQALGPVDVLVNNAGWDK 92 (250)
T ss_pred HHHCCCCCEEEECCCCCC
T ss_conf 997599979998988899
No 41
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.60 E-value=8.4e-07 Score=64.70 Aligned_cols=83 Identities=24% Similarity=0.320 Sum_probs=69.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++..- ++++.+|+.++++++++++.... .+....++|+.|.+++.++++..
T Consensus 10 KvalVTGas~GIG~aiA~~la~~Ga---~V~i~~r~~~~~~~~~~ei~~~g-----~~~~~~~~Dvt~~~~v~~~v~~~~ 81 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYVEAGA---QVAIAARHLDALEKLADEIGTSG-----GKVVPVCCDVSQHQQVTSMLDQVT 81 (253)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9899979565999999999998699---99999798899999999998459-----919999836999999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 82 ~~~G~iDiLVnNAG~~~ 98 (253)
T PRK05867 82 AELGGIDIAVCNAGIIT 98 (253)
T ss_pred HHHCCCCEEEECCCCCC
T ss_conf 99599859998997788
No 42
>PRK10206 putative dehydrogenase; Provisional
Probab=98.60 E-value=4e-06 Score=60.14 Aligned_cols=148 Identities=11% Similarity=0.111 Sum_probs=96.6
Q ss_pred CCCEEEEECCCHHHHHH-HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 97319998498779999-99999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVV-AHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~-~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|+=++-|+|+|..|+.. +-.|.+..+.+ .+++..++.++.++.+...+. +.. ..++.+++.+
T Consensus 1 m~irvaiiG~G~~~~~fH~P~i~~~~~~~-~v~~v~~~~~~~~~~a~~~~~---------~~~-------~~~~~~ll~~ 63 (345)
T PRK10206 1 MVINCAFIGFGKSTTRYHLPYVLNRKDSW-HVAHIFRRHAKPEEQAPIYSH---------IHF-------TSDLDEVLND 63 (345)
T ss_pred CEEEEEEECCCHHHHHHHHHHHHCCCCCE-EEEEEECCCHHHHHHHHHCCC---------CCE-------ECCHHHHHCC
T ss_conf 92479999264999999899996389957-999997887618888877699---------812-------2899999549
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECC--CHHHHHHH
Q ss_conf 3972999737610032789999862886896036642000014420000357751088885188699537--50111488
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGA--GFDPGVVN 157 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~--G~~PGl~~ 157 (419)
-..|+|+.|.|+..|...+++|+++|+|.+.-- +... -.....++-+.|+++|+.+.+.- =|+|..-.
T Consensus 64 ~~id~V~i~tP~~~H~~~a~~al~aGkhV~~EK---P~~~-------~~~ea~~l~~~a~~~g~~l~v~~nrR~~~~~~~ 133 (345)
T PRK10206 64 PDVKLVVVCTHADSHFEYAKRALEAGKNVLVEK---PFTP-------TLAQAKELFALAKSKGLTVTPYQNRRFDSCFLT 133 (345)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEC---CCCC-------CHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHH
T ss_conf 999999987995789999999997899289803---6649-------899999999999970997999872017949999
Q ss_pred HHHHHHHHH-HCCCCCEEEEE
Q ss_conf 999999997-43666389763
Q gi|254780742|r 158 AFARLAQDE-YFDKITDIDII 177 (419)
Q Consensus 158 lla~~~~~~-~~d~~~~i~~~ 177 (419)
++.++++ .++++..+.+.
T Consensus 134 --~k~~i~~G~lG~v~~~e~~ 152 (345)
T PRK10206 134 --AKKAIESGKLGEIVEVESH 152 (345)
T ss_pred --HHHHHHCCCCCCEEEEEEE
T ss_conf --9998665877770999998
No 43
>TIGR01035 hemA glutamyl-tRNA reductase; InterPro: IPR000343 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents glutamyl-tRNA reductase (1.2.1.70 from EC), which reduces glutamyl-tRNA to glutamate-1-semialdehyde during the first stage of tetrapyrrole biosynthesis by the C5 pathway , . This enzyme required NADPH as a coenzyme.; GO: 0008883 glutamyl-tRNA reductase activity, 0050661 NADP binding, 0033014 tetrapyrrole biosynthetic process.
Probab=98.59 E-value=2.9e-07 Score=67.82 Aligned_cols=99 Identities=22% Similarity=0.404 Sum_probs=73.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.|++||+|||-||..++.+|.+.. + .+|+|+.|+.+|++.||++++.. +.+.++..-.+.|.+.+..
T Consensus 185 ~~~~LliGAGeMg~Lva~~L~~~~-v-~~~~i~NRt~~rA~~LA~e~~~P---------~~~~f~~La~~~L~~~L~~-- 251 (436)
T TIGR01035 185 GKKVLLIGAGEMGELVAKHLREKG-V-GKVLIANRTYERAEKLAKELGGP---------EAVKFEALALEKLEEALAE-- 251 (436)
T ss_pred CCEEEEEECCHHHHHHHHHHHHCC-C-CEEEEECCCHHHHHHHHHHCCCC---------CCCCCCHHHHHHHHHHHHH--
T ss_conf 641899827457999999996489-5-28988556778999999870786---------6454445548999999742--
Q ss_pred CCEEEECCCCC---CCHHHHHHHHHCC--------CCEEEECC
Q ss_conf 72999737610---0327899998628--------86896036
Q gi|254780742|r 82 SQIIINVGSSF---LNMSVLRACIDSN--------VAYIDTAI 113 (419)
Q Consensus 82 ~dvVin~~~p~---~~~~v~~a~i~~g--------~hyvD~s~ 113 (419)
+||||++.|.. .+..=++-|+... .=.||++-
T Consensus 252 ~DivissTgA~~pi~~~~~~e~a~~~Rr~de~~~pl~~~DIAv 294 (436)
T TIGR01035 252 ADIVISSTGAPEPIVSKEDVERALKERRRDEAARPLFIVDIAV 294 (436)
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCC
T ss_conf 8899985576531002034899999722200158869997588
No 44
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; InterPro: IPR013454 Rhamnose is a methyl-pentose sugar which is found as a constituent of pectin within the cell walls of dicotyledonous plants and has also been found in the mucilage of a number of legume plants . RhaD from Rhizobium leguminosarum bv. trifolii is encoded by a gene occurring in a rhamnose utilisation cluster, and is necessary for growth on this compound . This protein is predicted to be a bifunctional NAD-dependent aldolase/dehydrogenase..
Probab=98.59 E-value=4.7e-07 Score=66.37 Aligned_cols=87 Identities=14% Similarity=0.247 Sum_probs=72.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEE------------EEECCC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308------------994378
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAI------------HQVDAL 68 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~D~~ 68 (419)
+|.++|.|+ ||+|+.++..|+...- +|||||.|.++++.+++++.++.... +.-. +++||+
T Consensus 424 ~~Va~VtGGasGIG~~~A~rL~~eGA---hvV~aD~d~~~a~~va~~~~~~fG~d---~a~AGsdisaCGPaiGl~~DvT 497 (709)
T TIGR02632 424 RRVAFVTGGASGIGRETARRLVDEGA---HVVLADLDAEAAEAVAAEIVDKFGAD---KAVAGSDISACGPAIGLKLDVT 497 (709)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHCCC---EEEEECCCHHHHHHHHHHHHHHCCCC---CEECCCCHHCCCCCEEEEEEEC
T ss_conf 70688973886526899999973697---79996236578999999986313888---1211432000467100276317
Q ss_pred CHHHHHHHHHHC-----CCCEEEECCCCCCC
Q ss_conf 989999999753-----97299973761003
Q gi|254780742|r 69 NIKAVVELIKKT-----NSQIIINVGSSFLN 94 (419)
Q Consensus 69 d~~~l~~~~~~~-----~~dvVin~~~p~~~ 94 (419)
|.+++++.+.+. +.|+|+|.+|=+.-
T Consensus 498 ~e~~v~~~f~~v~~~yGGvD~vv~nAGi~~S 528 (709)
T TIGR02632 498 DEEAVKAAFAEVALAYGGVDIVVNNAGIAVS 528 (709)
T ss_pred CHHHHHHHHHHHHHHHCCEEEEEECCCHHCC
T ss_conf 5899999999999974984787652530105
No 45
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=98.58 E-value=1.7e-06 Score=62.69 Aligned_cols=143 Identities=10% Similarity=0.122 Sum_probs=93.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEE-EEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 319998498779999999996089872599-9639999999999873430245555573089943789899999997539
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDIN-IASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~-va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.+|.++|+|.+|+.+++.|.........++ +..|+.++.+.. +. ..+.. ..+.+.| .. +
T Consensus 2 mrVgiiG~GaIG~~va~~l~~~~~~~~~~v~~~~~~~~~~~~~---~~--------~~~~~----~~~~~~L---~~--~ 61 (265)
T PRK13303 2 MKVAMIGFGAIAAAVYELLEHDPRLRVDWVIVPEHSVDAVRRA---LG--------RAVQV----VSSVDAL---AQ--R 61 (265)
T ss_pred CEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH---HC--------CCCCC----CCCHHHH---HH--C
T ss_conf 2999985468999999998449972799999468526778753---04--------58864----4798898---23--7
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHH
Q ss_conf 72999737610032789999862886896036642000014420000357751088885188699537501114889999
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAFAR 161 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~lla~ 161 (419)
+|+||-|+++..-......++++|+|++-+|--- +. -.....++.+.|++.|..+.+-.|.-.|++.+-+
T Consensus 62 ~DlVVE~A~~~av~~~~~~~L~~g~dl~v~SvgA--La-------D~~~~~~l~~~A~~~~~~i~ipsGAigGlD~l~a- 131 (265)
T PRK13303 62 PDLVVECAGHAALKEHVVPILKAGIDCAVASVGA--LA-------DEALRERLEQAAEAGGARLHLLSGAIGGIDALAA- 131 (265)
T ss_pred CCEEEECCCHHHHHHHHHHHHHCCCCEEEECCHH--HC-------CHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH-
T ss_conf 9999989888999999999997299889988158--57-------9889999999998689759972623440679999-
Q ss_pred HHHHHHCCCCCEEEEEEC
Q ss_conf 999974366638976302
Q gi|254780742|r 162 LAQDEYFDKITDIDIIDV 179 (419)
Q Consensus 162 ~~~~~~~d~~~~i~~~~~ 179 (419)
++ .+.++++.+...
T Consensus 132 --a~--~~~i~~V~~~t~ 145 (265)
T PRK13303 132 --AK--EGGLDEVRYTGR 145 (265)
T ss_pred --HH--CCCCCEEEEEEE
T ss_conf --87--189738999986
No 46
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.58 E-value=8.8e-07 Score=64.55 Aligned_cols=83 Identities=16% Similarity=0.184 Sum_probs=68.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||-|| .++|+.+++.|+++.. ++++.+||.++++++++++.... .+.....+|+.|.+++.++++..
T Consensus 6 gKvvlITGASsGIG~aiA~~~A~~Ga---~Vvl~~R~~~~L~~~a~e~~~~G-----~~~~~v~~DVsd~~~v~~~~~~~ 77 (324)
T PRK06139 6 GAVVVITGASSGIGRATAEAFARRGA---RLVLAARDEEALFEVAEECRALG-----AEVLVVPTDVTHADQVQALATQA 77 (324)
T ss_pred CCEEEEECHHHHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHH
T ss_conf 97799938254999999999998799---89999899999999999999549-----94899976678857899999999
Q ss_pred -----CCCEEEECCCCC
Q ss_conf -----972999737610
Q gi|254780742|r 81 -----NSQIIINVGSSF 92 (419)
Q Consensus 81 -----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 78 ~~~~G~IDiLVNNAGi~ 94 (324)
T PRK06139 78 ASFLGRIDVWFNNVGVG 94 (324)
T ss_pred HHHCCCCCEEEECCCCC
T ss_conf 99749987886457557
No 47
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.58 E-value=1.7e-06 Score=62.70 Aligned_cols=82 Identities=17% Similarity=0.246 Sum_probs=65.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|+|.|||-|| .|+|+.+++.|+++. .+++..+|+.++++.+.. ..++...+|+.|.+++.+++.+
T Consensus 3 m~K~vlITGassGIG~alA~~la~~G---~~V~~~~R~~~~l~~l~~-----------~~~~~~~~Dv~d~~~v~~~v~~ 68 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCAHALQKRG---WRVFATCRKPEDIAALEA-----------EGLEAFYLDYAEPESIAALVAQ 68 (277)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHH-----------CCCEEEEEECCCHHHHHHHHHH
T ss_conf 98689992568699999999999879---999999799999999984-----------8981999726677999999999
Q ss_pred C------CCCEEEECCCCCCCHH
Q ss_conf 3------9729997376100327
Q gi|254780742|r 80 T------NSQIIINVGSSFLNMS 96 (419)
Q Consensus 80 ~------~~dvVin~~~p~~~~~ 96 (419)
. +.|++||.+|.....+
T Consensus 69 ~~~~~~g~id~lvNnAg~~~~g~ 91 (277)
T PRK05993 69 VLELSGGKLDALFNNGAYGQPGA 91 (277)
T ss_pred HHHHHCCCEEEEEECCCCCCCCC
T ss_conf 99980897069996664356770
No 48
>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=98.58 E-value=8e-07 Score=64.82 Aligned_cols=92 Identities=16% Similarity=0.208 Sum_probs=69.0
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 999849-8779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 5 VLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 5 ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
|||+|| |.+|+.+++.|+++. + ++.+..|++++.. +..+. ...++.++.|..|+++|.+.++ ++|
T Consensus 1 IlV~GatG~iG~~vv~~L~~~g-~--~Vr~l~R~~~~~~--~~~l~-------~~gve~v~gD~~d~~sl~~al~--gvd 66 (232)
T pfam05368 1 ILVFGATGYQGGSVVRASLKAG-H--PVRALVRDPKSEL--AKSLK-------AAGVELVEGDLDDHESLVEALK--GVD 66 (232)
T ss_pred EEEECCCHHHHHHHHHHHHHCC-C--CEEEEECCCCHHH--HHHHH-------HCCCEEEEECCCCHHHHHHHHC--CCC
T ss_conf 0998968289999999998589-9--3899971873665--66664-------1798899906888789999967--998
Q ss_pred EEEECCCCCCC------HHHHHHHHHCCCCEEE
Q ss_conf 99973761003------2789999862886896
Q gi|254780742|r 84 IIINVGSSFLN------MSVLRACIDSNVAYID 110 (419)
Q Consensus 84 vVin~~~p~~~------~~v~~a~i~~g~hyvD 110 (419)
.|+++++++.. ..+++||.++|+..+=
T Consensus 67 ~v~~~~~~~~~~~~~~~~~~~~AA~~aGVk~~V 99 (232)
T pfam05368 67 VVFSVTGFWLSKEIEDGKKLADAAKEAGVKHFI 99 (232)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 899915887417799999999999973998345
No 49
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.58 E-value=1.1e-06 Score=63.94 Aligned_cols=102 Identities=6% Similarity=0.107 Sum_probs=67.6
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC------CHHHHHHH
Q ss_conf 1999849-8779999999996089872599963999999999987343024555557308994378------98999999
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDAL------NIKAVVEL 76 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~------d~~~l~~~ 76 (419)
++++-|+ |+.|+..++.|.++.+......|-.-+.+|++++.+... .+|+....-|+. +.+...++
T Consensus 2 nyflTGaTGFLG~~LL~~LL~~~~a~V~cLVR~~s~~r~~~~~~~~~-------~~Rv~~v~GDL~~p~LGLs~~~~~~L 74 (663)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRPGARVHVLVRRQSLGRFERLAEYWG-------VDRVVPVVGDLTAPELGLSAETIAEL 74 (663)
T ss_pred CEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHC-------CCCEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 36540684288999999998489998999978774999999999748-------98879946777876789599999999
Q ss_pred HHHCCCCEEEECCCCC---CC------------HHHHHHHHHCC---CCEEEECCC
Q ss_conf 9753972999737610---03------------27899998628---868960366
Q gi|254780742|r 77 IKKTNSQIIINVGSSF---LN------------MSVLRACIDSN---VAYIDTAIH 114 (419)
Q Consensus 77 ~~~~~~dvVin~~~p~---~~------------~~v~~a~i~~g---~hyvD~s~~ 114 (419)
.. +.|+|++++--+ +. ..+++.|...+ .|||.+.+.
T Consensus 75 a~--~vd~I~H~aA~v~~~~~y~~~~~~NV~GTr~vL~LA~~~~~~~~h~vST~~V 128 (663)
T PRK07201 75 KG--KIDHFFHLAAVYDLTADEESQRAANVEGTRAAIELAERLDAGTFHHVSSIAV 128 (663)
T ss_pred HC--CCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEE
T ss_conf 67--4899998982357889989976521299999999998479974799963745
No 50
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=98.58 E-value=1.8e-06 Score=62.40 Aligned_cols=104 Identities=20% Similarity=0.340 Sum_probs=77.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-------------------HHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 7319998498779999999996089872599963999-------------------999999987343024555557308
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-------------------QKCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
+.+|+|+|+|+.|+.++.||++.. + .+|+|+|.|. .|++..++.|...++. -++++
T Consensus 138 ~a~VlivG~GGLGs~~a~yLA~aG-V-G~i~lvD~D~Ve~SNL~RQil~~~~diG~~Ka~~a~~~L~~~Np~---i~i~~ 212 (379)
T PRK08762 138 RARVLLIGAGGLGSPAAFYLAAAG-V-GHLRIADHDVVDRSNLQRQILHTEDSVGQPKVDSAAQRIAALNPR---VQVEA 212 (379)
T ss_pred HCCEEEECCCHHHHHHHHHHHHHC-C-CEEEEEECCCCCCCCHHHCCCCCHHHCCCHHHHHHHHHHHHHCCC---CCEEE
T ss_conf 397899888755799999999837-9-758976288613345011257464335555899999999986899---73385
Q ss_pred EEECCCCHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECC
Q ss_conf 994378989999999753972999737610-032789999862886896036
Q gi|254780742|r 63 HQVDALNIKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 63 ~~~D~~d~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~ 113 (419)
.... .+.+.+.+++++ .|+||+|.--| ..+.+-++|+++++++|.-+.
T Consensus 213 ~~~~-l~~~n~~~li~~--~DlViDctDN~~tR~liN~~c~~~~~PlV~ga~ 261 (379)
T PRK08762 213 VQTR-VTSSNVEALLQD--VDVVVDGADNFPARYLLNDACVKLGKPLVYGAV 261 (379)
T ss_pred EHHC-CCHHHHHHHHHH--CCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 0210-898999999862--889998688778899999999997999799988
No 51
>PRK08223 hypothetical protein; Validated
Probab=98.58 E-value=2.1e-06 Score=62.02 Aligned_cols=103 Identities=18% Similarity=0.254 Sum_probs=75.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-------------------HHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 7319998498779999999996089872599963999-------------------999999987343024555557308
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-------------------QKCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
+++|+|+|+|++|+.++.+|++.. + .++.++|.|. .|.+..++.+...+ |.+++
T Consensus 27 ~s~VlVvG~GGlGs~~a~~LAraG-V-G~i~lvD~D~velSNLnRQi~~~~~diG~~Kveva~e~l~~IN-----P~v~V 99 (287)
T PRK08223 27 NSRVAIAGLGGVGGVHLLTLARLG-I-GKFNIADFDVFELVNSNRQYGAMMSSNGRPKVEVMREIALDIN-----PELEI 99 (287)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCCCCCCCCCHHHCCCHHHCCCCHHHHHHHHHHHHC-----CCCEE
T ss_conf 596899936755799999999828-9-7599974998463440222344743449858999999999869-----89879
Q ss_pred EEEC-CCCHHHHHHHHHHCCCCEEEECCCCC---CCHHHHHHHHHCCCCEEEECC
Q ss_conf 9943-78989999999753972999737610---032789999862886896036
Q gi|254780742|r 63 HQVD-ALNIKAVVELIKKTNSQIIINVGSSF---LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 63 ~~~D-~~d~~~l~~~~~~~~~dvVin~~~p~---~~~~v~~a~i~~g~hyvD~s~ 113 (419)
...+ --+.+.+.++++ ++|+||++.--| ..+.+-++|.+.|+++|..+-
T Consensus 100 ~~~~~~lt~~N~~~~l~--~~DvVvDg~DnF~~~tR~ll~~ac~~~giP~v~~a~ 152 (287)
T PRK08223 100 RAFPEGIGKENLDTFLD--GVDVYVDGLDFFVFDIRRLLFREAQARGIPALTAAP 152 (287)
T ss_pred EEECCCCCHHHHHHHHH--CCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 99587899899999986--799999796678831899999999985998498315
No 52
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.58 E-value=1.5e-06 Score=62.91 Aligned_cols=84 Identities=20% Similarity=0.279 Sum_probs=70.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||.|+ +++|..+++.|+++. .++++.||+.++++++++++.... .++...++|+.|.+++.++++..
T Consensus 6 gK~alITGgs~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~l~~~g-----~~~~~~~~Dl~~~~~~~~~~~~~ 77 (253)
T PRK12826 6 GRVALVTGAARGIGRAIAVRFAADG---ADVIVVDICGQAAAATAELVAAAG-----GKARAYQVDVRDRAALKALVAAG 77 (253)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHHC-----CCEEEEEEECCCHHHHHHHHHHH
T ss_conf 9889994897789999999999879---989999898899999999998509-----95899995179999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||++|.+.
T Consensus 78 ~~~~g~iD~lvnnAg~~~ 95 (253)
T PRK12826 78 VERFGRLDILVANAGIFP 95 (253)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998399878998998899
No 53
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.57 E-value=1.3e-06 Score=63.49 Aligned_cols=83 Identities=13% Similarity=0.184 Sum_probs=70.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.++..|++... ++++++|+.++++++++++... ..++...++|+.|.+++.++++..
T Consensus 8 KvalVTGgs~GIG~aia~~la~~Ga---~Vvi~~~~~~~~~~~~~~l~~~-----g~~~~~~~~Dv~~~~~~~~~~~~~~ 79 (250)
T PRK12939 8 KRALVTGAARGLGAAFAEALAEAGA---TVAFNDGLAAEARELAAALEAA-----GGRAHAIAADLADPASVQRFFDAAA 79 (250)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHC-----CCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 8799958366899999999998799---9999969889999999999955-----9909999924899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|...
T Consensus 80 ~~~g~iDiLVNNAG~~~ 96 (250)
T PRK12939 80 AALGGLDGLVNNAGITN 96 (250)
T ss_pred HHCCCCCEEEECCCCCC
T ss_conf 97499979998877899
No 54
>PRK09186 flagellin modification protein A; Provisional
Probab=98.57 E-value=1.3e-06 Score=63.50 Aligned_cols=96 Identities=17% Similarity=0.247 Sum_probs=74.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|.+||.|+ +++|+.+++.|+++.. ++++.||+.++++++++++.+.. ..++...++|+.|.+++.++++..
T Consensus 4 gK~~lVTGgs~GIG~aia~~la~~Ga---~V~~~~~~~~~~~~~~~~l~~~~----~~~v~~~~~Dvt~~~~v~~~~~~~ 76 (255)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAGG---IVIAADINKEALNKLLESLGTIE----KTKLTLVELDITDQESLEEFLSKS 76 (255)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHC----CCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 59899979586899999999998799---99999698899999999998705----980799984689999999999999
Q ss_pred -----CCCEEEECCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf -----97299973761003278999986288689603
Q gi|254780742|r 81 -----NSQIIINVGSSFLNMSVLRACIDSNVAYIDTA 112 (419)
Q Consensus 81 -----~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s 112 (419)
+.|++||+++|.-. ..+.++.|++
T Consensus 77 ~~~~g~id~lVnnA~~~~~--------~~~~~~~~~~ 105 (255)
T PRK09186 77 QERYGKIDGAVNCAYPRNK--------QYGKKFFDVS 105 (255)
T ss_pred HHHHCCCCEEEECCCCCCC--------CCCCCCCCCC
T ss_conf 9981997789975766787--------6777701099
No 55
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.57 E-value=1.3e-06 Score=63.50 Aligned_cols=84 Identities=18% Similarity=0.306 Sum_probs=69.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||-|+ +++|+.+++.|+++.- +++++|||.++++++++++.... .+....++|+.|++++.+++...
T Consensus 6 gK~alVTGgs~GiG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~i~~~g-----~~~~~~~~Dv~~~~~v~~~~~~~ 77 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREGA---SVVVADINAEGAERVAKQIVADG-----GTAIAVQVDVSDPDSAKAMADRT 77 (250)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHHHH
T ss_conf 98899979768899999999998699---99999798899999999998559-----84999982589999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.++.+-
T Consensus 78 ~~~fG~iDilVNnAg~~~ 95 (250)
T PRK07774 78 VSAFGGIDYLVNNAAIYG 95 (250)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998399989998884357
No 56
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.57 E-value=1.4e-06 Score=63.27 Aligned_cols=82 Identities=23% Similarity=0.313 Sum_probs=68.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ .++|+.+++.|+++.- ++++.||+.++++++++++.+. ..+.....+|+.|.+++.+++++.
T Consensus 7 KvalITGas~GIG~aiA~~la~~Ga---~V~l~~r~~~~l~~~~~~i~~~-----g~~~~~~~~Dvtd~~~v~~~v~~~~ 78 (238)
T PRK07666 7 KNALITGAGRGIGRAVAIALAKEGV---NVGLLARSEENLKAVAKEVEAE-----GVKAVIATADVSDYEEVTTAIETLK 78 (238)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHC-----CCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 9899916377899999999998799---8999989999999999999955-----9927999930799999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 79 ~~~G~iDiLVNNAGi~ 94 (238)
T PRK07666 79 NGLGSIDILINNAGIS 94 (238)
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9819987899847457
No 57
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.56 E-value=1.3e-06 Score=63.31 Aligned_cols=84 Identities=18% Similarity=0.218 Sum_probs=69.4
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.|||-|| +++|+.+++.++++.- ++++++||.++++++++++.... .+.....+|+.|.+++.++++..
T Consensus 8 ~KvVvITGASsGIGra~A~~fA~~Ga---~Vvl~aR~~~~L~~~a~e~~~~G-----~~~~~~~~DVsd~~~v~~~~~~~ 79 (338)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGA---KVVLLARGEEGLEGLAAEIRAAG-----GEALAVVADVADAEAVQAAADRA 79 (338)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CEEEEEEEECCCHHHHHHHHHHH
T ss_conf 89899948434999999999998799---89999899999999999999639-----81899980179999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 80 ~~~~G~IDvlVNNAGi~~ 97 (338)
T PRK07109 80 EEELGPIDTWVNNAMVTV 97 (338)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998499888865466677
No 58
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.56 E-value=1.4e-06 Score=63.24 Aligned_cols=86 Identities=15% Similarity=0.207 Sum_probs=69.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||.|+ +++|+.+++.|+++.- ++++.+|+.+++++.++++...... ...+...++|+.+.+++.++++..
T Consensus 7 gK~alVTGas~GIG~aiA~~la~~Ga---~Vii~~r~~~~l~~~~~~l~~~~~~--~~~v~~~~~Dvs~~~~v~~~v~~~ 81 (277)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAALVAAGA---AVMIVGRNPDKLAAAAEEIEALAGG--AGAVRYEPADVTNEDEVARAVDAA 81 (277)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHCCC--CCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 99899948874999999999998799---8999979889999999999961278--862899957899999999999999
Q ss_pred -----CCCEEEECCCCC
Q ss_conf -----972999737610
Q gi|254780742|r 81 -----NSQIIINVGSSF 92 (419)
Q Consensus 81 -----~~dvVin~~~p~ 92 (419)
+.|++||+++..
T Consensus 82 ~~~~g~iD~LVnnAg~~ 98 (277)
T PRK05875 82 TAWHGRLHGVVHCAGGS 98 (277)
T ss_pred HHHHCCCEEEEECCCCC
T ss_conf 99849953999878136
No 59
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.56 E-value=8.7e-07 Score=64.61 Aligned_cols=84 Identities=20% Similarity=0.362 Sum_probs=66.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|| +|||.|| +++|+.+++.|+++.. ++++.+||.++++++++++..... ..+....+|+.|.+++.+++.+
T Consensus 1 MK-~vlITGassGIG~a~A~~la~~G~---~v~l~~R~~~~l~~~~~~l~~~~~----~~~~~~~~D~~~~~~~~~~~~~ 72 (243)
T PRK07102 1 MK-KILIIGATSDIARACARRYAAAGA---RLYLAARDTERLERIAADLEARGA----VAVATHELDILDTARHAAFLDN 72 (243)
T ss_pred CC-EEEEECCCHHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCCC----CEEEEEECCCCCHHHHHHHHHH
T ss_conf 99-799915745999999999998799---899998988999999999985358----6289984340369999999999
Q ss_pred C--CCCEEEECCCCC
Q ss_conf 3--972999737610
Q gi|254780742|r 80 T--NSQIIINVGSSF 92 (419)
Q Consensus 80 ~--~~dvVin~~~p~ 92 (419)
. ..|+++|++|..
T Consensus 73 ~~~~~d~~v~~aG~~ 87 (243)
T PRK07102 73 LPALPDTVLIAVGTL 87 (243)
T ss_pred HHHHCCEEEEEEECC
T ss_conf 875379799973036
No 60
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.55 E-value=1.5e-06 Score=62.97 Aligned_cols=87 Identities=16% Similarity=0.193 Sum_probs=67.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|+|.+||-|+ +++|..+++.|+++. .++++.+|+.+++.+-..++... ...++...++|+.|.+++.++++.
T Consensus 1 M~KvalITGas~GIG~a~a~~la~~G---~~Vv~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~v~~ 73 (245)
T PRK12824 1 MKKIALVTGAKRGIGSAIARELLADG---YRVIATYFGNYDAAKDWFEEYGF----TEDQVRLKSLDVTDTEECQEALAR 73 (245)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCHHHHHHHHHHHHH----CCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 98599994788889999999999879---98999958807789999998740----499389999138999999999999
Q ss_pred C-----CCCEEEECCCCCCC
Q ss_conf 3-----97299973761003
Q gi|254780742|r 80 T-----NSQIIINVGSSFLN 94 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~~ 94 (419)
. +.|++||.+|....
T Consensus 74 ~~~~~g~iDiLVnnAG~~~~ 93 (245)
T PRK12824 74 IEEEEGPVDILVNNAGITRD 93 (245)
T ss_pred HHHHCCCCCEEEECCCCCCC
T ss_conf 99974999899989888999
No 61
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.55 E-value=1.4e-06 Score=63.11 Aligned_cols=82 Identities=13% Similarity=0.144 Sum_probs=65.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH--
Q ss_conf 31999849-877999999999608987259996399999999998734302455555730899437898999999975--
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK-- 79 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-- 79 (419)
|.|||-|| .|+|+.+++.|+++. .++++.|||.++++++++++.. .+....++|+.|.+++.+.+.+
T Consensus 2 K~vlITGassGIG~a~A~~~a~~G---~~V~~~~r~~~~l~~~~~~l~~-------~~~~~~~~Dvtd~~~v~~~~~~~~ 71 (258)
T PRK08267 2 KSIFITGAASGIGRATARLFAARG---WRVGAYDINEDGLAALAAELGA-------ERAWTGALDVTDRAAWDAALADFC 71 (258)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHCC-------CCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 989990722689999999999879---9999998889999999998369-------967999911799999999999999
Q ss_pred --C--CCCEEEECCCCCCC
Q ss_conf --3--97299973761003
Q gi|254780742|r 80 --T--NSQIIINVGSSFLN 94 (419)
Q Consensus 80 --~--~~dvVin~~~p~~~ 94 (419)
. +.|++||.+|-...
T Consensus 72 ~~~~G~iDiLVNNAGi~~~ 90 (258)
T PRK08267 72 AATGGRLDVLFNNAGILRG 90 (258)
T ss_pred HHHCCCCCEEEECCCCCCC
T ss_conf 9958998689988877999
No 62
>PRK08324 short chain dehydrogenase; Validated
Probab=98.55 E-value=1.4e-06 Score=63.21 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=67.5
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||.|+ |++|+.+++.|++..- +++++|||.++++++++++.. ..+....++|+.|.+++.+++.+.
T Consensus 422 KVALVTGga~GIG~A~A~~fa~eGA---~Vvl~D~~~~~l~~~a~el~~------~~~~~~~~~DVtd~~~v~~~v~~~~ 492 (676)
T PRK08324 422 KVALVTGAAGGIGLATAKRLAAEGA---CVVLADIDEEAAEAAAAELGG------RDRALGVACDVTDEAAVQAAFEEAA 492 (676)
T ss_pred CEEEEECCCCCHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHC------CCCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 8799947988162999999998799---899995888999999999707------9947999806899999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 493 ~~fGgIDiLVnNAGi~ 508 (676)
T PRK08324 493 LAFGGVDIVVSNAGIA 508 (676)
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9859988899767778
No 63
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.55 E-value=1.7e-06 Score=62.69 Aligned_cols=84 Identities=13% Similarity=0.244 Sum_probs=69.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++..- ++++.||+.+++++.++++.... ..+....++|+.|.+++.++++..
T Consensus 8 KvalVTGa~~GIG~aiA~~~a~~Ga---~V~i~~~~~~~~~~~~~~l~~~~----g~~~~~~~~Dvt~~~~v~~~v~~~~ 80 (259)
T PRK07063 8 KVALVTGAAQGIGAAIARAFVREGA---AVALADLDAALAERAAAAIARQT----GARVLALPADVTRAASVRAAVARAE 80 (259)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHC----CCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 8899958787899999999998799---89999798789999999998850----9918999836899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|...
T Consensus 81 ~~~G~iDiLVNNAG~~~ 97 (259)
T PRK07063 81 AAFGPLDVLVNNAGINV 97 (259)
T ss_pred HHHCCCCEEEECCCCCC
T ss_conf 98199889998997789
No 64
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.55 E-value=1.7e-06 Score=62.63 Aligned_cols=83 Identities=22% Similarity=0.328 Sum_probs=69.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|++||-|+ +++|+.+++.|+++.- ++++.|||.++++++++++..... ..+.....|+.+.+++.+++++.
T Consensus 8 K~alITG~s~GIG~aiA~~la~~Ga---~V~i~~r~~~~l~~~~~~l~~~~~----~~~~~~~~D~~~~~~~~~~~~~~g 80 (259)
T PRK06125 8 KRVLITGASKGIGAAAAEAFAAEGC---HLVLAARDADALAALAADLRAAHG----VDVAVHALDLSSPEAREQLAAEAG 80 (259)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHCC----CCEEEEECCCCCHHHHHHHHHHHC
T ss_conf 9899968776899999999998799---899997988999999999987009----866999888999999999999858
Q ss_pred CCCEEEECCCCC
Q ss_conf 972999737610
Q gi|254780742|r 81 NSQIIINVGSSF 92 (419)
Q Consensus 81 ~~dvVin~~~p~ 92 (419)
+.|++||.+|..
T Consensus 81 ~iDiLVnnAG~~ 92 (259)
T PRK06125 81 DIDILVNNAGAI 92 (259)
T ss_pred CCCEEEECCCCC
T ss_conf 998999768778
No 65
>PRK12743 acetoin dehydrogenase; Provisional
Probab=98.55 E-value=1.7e-06 Score=62.70 Aligned_cols=86 Identities=16% Similarity=0.254 Sum_probs=69.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996-39999999999873430245555573089943789899999997
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIA-SRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
|.|.+||.|+ +++|+.++..|+++.. ++++. +|+.+.++++++.+... ..+....++|+.|.++...+++
T Consensus 1 M~KValITGgs~GIG~a~a~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dv~~~~~~~~~~~ 72 (253)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGF---DIGITWHSDEEGAKETAEEVVSH-----GVRAEIVHLDLSNLPEGAQAIE 72 (253)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHC-----CCCEEEEEECCCCHHHHHHHHH
T ss_conf 999899907588999999999998799---89997489979999999999945-----9918999904899999999999
Q ss_pred HC-----CCCEEEECCCCCCC
Q ss_conf 53-----97299973761003
Q gi|254780742|r 79 KT-----NSQIIINVGSSFLN 94 (419)
Q Consensus 79 ~~-----~~dvVin~~~p~~~ 94 (419)
+. +.|++||.+|....
T Consensus 73 ~~~~~~G~iDilVNnAG~~~~ 93 (253)
T PRK12743 73 KLIQRLGRLDVLVNNAGAMTK 93 (253)
T ss_pred HHHHHCCCCCEEEECCCCCCC
T ss_conf 999981999899989989999
No 66
>PRK07479 consensus
Probab=98.55 E-value=1.7e-06 Score=62.65 Aligned_cols=82 Identities=17% Similarity=0.272 Sum_probs=69.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||.|+ +++|+.+++.|+++.. ++++.||+.++++++++++.... .+....++|+.|.+++.++++..
T Consensus 6 K~alITGgs~GIG~a~a~~la~~G~---~V~i~~~~~~~~~~~~~~l~~~g-----~~~~~~~~Dv~~~~~~~~~~~~~~ 77 (252)
T PRK07479 6 KVAIVTGAGSGFGEGIAKRFAREGA---KVVVADLNAAAAERVASEIADAG-----GNAIAVAADVSRGADVEALVEAAL 77 (252)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 8899938876899999999998799---99999798999999999998539-----978999925899999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|..
T Consensus 78 ~~~G~iD~lVnnAG~~ 93 (252)
T PRK07479 78 EAFGRVDIVVNNAGTT 93 (252)
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9819985999899766
No 67
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=98.55 E-value=1.7e-06 Score=62.60 Aligned_cols=93 Identities=23% Similarity=0.421 Sum_probs=70.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.|++||+|||-||..++.+|+++.- .+|+|+.|+.+|++.+++++.. ++ ..-+.+...+. .
T Consensus 178 ~~~vlvIGAGem~~lva~~L~~~g~--~~i~IaNRT~erA~~La~~~~~----------~~-----~~l~el~~~l~--~ 238 (414)
T COG0373 178 DKKVLVIGAGEMGELVAKHLAEKGV--KKITIANRTLERAEELAKKLGA----------EA-----VALEELLEALA--E 238 (414)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--CEEEEECCCHHHHHHHHHHHCC----------EE-----ECHHHHHHHHH--H
T ss_conf 6769998651899999999985898--7799975878999999998387----------02-----21877887652--0
Q ss_pred CCEEEECCCCC---CCHHHHHHHHHCCCC--EEEECC
Q ss_conf 72999737610---032789999862886--896036
Q gi|254780742|r 82 SQIIINVGSSF---LNMSVLRACIDSNVA--YIDTAI 113 (419)
Q Consensus 82 ~dvVin~~~p~---~~~~v~~a~i~~g~h--yvD~s~ 113 (419)
+|+||++.+.. ....-++.++....+ ++|++-
T Consensus 239 ~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiav 275 (414)
T COG0373 239 ADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAV 275 (414)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECC
T ss_conf 7999990699855407888998874116759998269
No 68
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=98.55 E-value=1.6e-06 Score=62.89 Aligned_cols=104 Identities=13% Similarity=0.258 Sum_probs=76.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-------------------HHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 7319998498779999999996089872599963999-------------------999999987343024555557308
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-------------------QKCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
+.+|+|+|+|++|+.++.+|++.. + .+|++.|.|. .|++..++.+.+.++ .-+++.
T Consensus 32 ~s~VlivG~GGlG~~~~~~La~aG-v-g~i~lvD~D~ve~sNLnRQ~l~~~~diG~~Kv~~a~~~l~~inp---~i~i~~ 106 (245)
T PRK05690 32 AARVLVVGLGGLGCAAAQYLAAAG-V-GTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESAKAALARINP---HIAIET 106 (245)
T ss_pred HCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCCCCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHCC---CCCEEE
T ss_conf 197899877777899999999859-9-65999968867888678886459877898879999999997588---752263
Q ss_pred EEECCCCHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECC
Q ss_conf 994378989999999753972999737610-032789999862886896036
Q gi|254780742|r 63 HQVDALNIKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 63 ~~~D~~d~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~ 113 (419)
..-.+ +.+.+.+++++ .|+||+|.--| ....+-++|.++++++|.-+.
T Consensus 107 ~~~~i-~~~n~~~li~~--~DlViD~~Dn~~~R~~ln~~c~~~~~P~v~g~~ 155 (245)
T PRK05690 107 INARL-DDDELAALIAA--HDLVLDCTDNVATRNQLNAACFAAKKPLVSGAA 155 (245)
T ss_pred EHHCC-CHHHHHHHHHC--CCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 33144-88899887507--888998789999999999999971998798778
No 69
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.54 E-value=1.9e-06 Score=62.29 Aligned_cols=84 Identities=17% Similarity=0.270 Sum_probs=68.7
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||.|+ +++|+.++..|+++. -++++.|||.+++++.++++.... .+....++|+.|.+++.++++..
T Consensus 8 gK~alVTGgs~GIG~aia~~la~~G---a~V~i~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~~~~~~~~~~~~~ 79 (260)
T PRK07576 8 GKNVFVVGGTSGINLGIAQAFARAG---ANVAVASRSQEKVDAAVAQLQQAG-----PEALGVSADVRDYAAVEAAFAAI 79 (260)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHCC-----CCEEEEEECCCCHHHHHHHHHHH
T ss_conf 9989995896199999999999879---999999798899999999999539-----94899993189999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.++...
T Consensus 80 ~~~~G~iDiLVnnAg~~~ 97 (260)
T PRK07576 80 ADEFGPIDVLVSGAAGNF 97 (260)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998499989998986789
No 70
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=98.54 E-value=1.5e-06 Score=63.04 Aligned_cols=104 Identities=16% Similarity=0.322 Sum_probs=75.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-------------------HHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 7319998498779999999996089872599963999-------------------999999987343024555557308
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-------------------QKCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
+.+|+|+|+|++|+.++.+|++.. + .+++++|.|. .|++..++.+.+.++. -+++.
T Consensus 21 ~s~VlivG~GGlGs~~~~~La~~G-v-g~i~lvD~D~ve~sNLnRQ~l~~~~diG~~K~~~a~~~l~~iNp~---i~i~~ 95 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAG-V-GKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPD---VEIEA 95 (228)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCCCCCCCCHHHHEECHHHCCCCHHHHHHHHHHHHCCC---CCCEE
T ss_conf 497899887788999999999839-9-758999787455676422102378668789599999999854887---53031
Q ss_pred EEECCCCHHHHHHHHHHCCCCEEEECCCCCC-CHHHHHHHHHCCCCEEEECC
Q ss_conf 9943789899999997539729997376100-32789999862886896036
Q gi|254780742|r 63 HQVDALNIKAVVELIKKTNSQIIINVGSSFL-NMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 63 ~~~D~~d~~~l~~~~~~~~~dvVin~~~p~~-~~~v~~a~i~~g~hyvD~s~ 113 (419)
....+ +.+.+.++++ ++|+||+|+.-+. ...+-++|.++++++|.-+.
T Consensus 96 ~~~~i-~~~~~~~~~~--~~DlVid~~Dn~~~R~~ln~~~~~~~iP~i~g~~ 144 (228)
T cd00757 96 YNERL-DAENAEELIA--GYDLVLDCTDNFATRYLINDACVKLGKPLVSGAV 144 (228)
T ss_pred HHHCC-CHHHHHHHHH--CCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 32100-5756998873--7989998779988999999999983998899974
No 71
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.54 E-value=1.9e-06 Score=62.29 Aligned_cols=83 Identities=18% Similarity=0.305 Sum_probs=69.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++... ++++.||+.++++++.+++.... ......++|+.|.+++..+++..
T Consensus 10 KvalVTGas~GIG~aiA~~la~~Ga---~V~i~~~~~~~~~~~~~~i~~~g-----~~~~~~~~Dv~~~~~v~~~v~~~~ 81 (258)
T PRK06949 10 KVALVTGASSGLGQRFAQVLSQAGA---KVVLASRRVERLKELRAEIEAEG-----GAAHVVSLDVTDYQSIKAAVAHAE 81 (258)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9899958577999999999998799---99999698899999999999659-----928999826899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||++|-..
T Consensus 82 ~~~G~iDiLVnnAG~~~ 98 (258)
T PRK06949 82 TEAGTIDILVNNSGVST 98 (258)
T ss_pred HHHCCCCEEEECCCCCC
T ss_conf 98499989998998899
No 72
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.54 E-value=1.8e-06 Score=62.41 Aligned_cols=83 Identities=24% Similarity=0.308 Sum_probs=70.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ .++|+.++..|++..- +++++||+.+++++.++++... ..+....+.|+.|.+++.+++++.
T Consensus 8 KvalVTGgs~GIG~a~A~~la~~Ga---~V~i~~~~~~~~~~~~~~i~~~-----g~~~~~~~~Dvt~~~~v~~~v~~~~ 79 (262)
T PRK13394 8 KTAVVTGAASGIGKEIALELARAGA---AVAIADLNQDGANAVADEINKA-----GGKAIGVAMDVTNEDAVNAGIDKVA 79 (262)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHC-----CCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9899958577899999999998799---9999979889999999999962-----9939999815899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|...
T Consensus 80 ~~~G~iDiLVnnAG~~~ 96 (262)
T PRK13394 80 ERFGSVDILVSNAGIQI 96 (262)
T ss_pred HHHCCCCEEEECCCCCC
T ss_conf 98199999998998899
No 73
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.54 E-value=1e-06 Score=64.15 Aligned_cols=84 Identities=14% Similarity=0.194 Sum_probs=69.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|.+||.|+ +++|+.+++.|+++.. ++++.||+.+++++.++++... ..+....++|+.|.+++.++++..
T Consensus 5 gK~~lITGas~GIG~aiA~~la~~Ga---~V~i~~r~~~~l~~~~~~l~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~ 76 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKGA---KLALIDLNQEKLEEAVAQCAAL-----GGEAEVYAANVTDEEDVEATFAQI 76 (253)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 98899948877899999999998799---8999979999999999999965-----994899982479999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|.+.
T Consensus 77 ~~~~g~iD~lVnNAGi~~ 94 (253)
T PRK08217 77 AEDFGQLNGLINNAGILR 94 (253)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998399859998574367
No 74
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.54 E-value=1.3e-06 Score=63.44 Aligned_cols=83 Identities=16% Similarity=0.250 Sum_probs=68.5
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC--
Q ss_conf 1999849-8779999999996089872599963999999999987343024555557308994378989999999753--
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT-- 80 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-- 80 (419)
+|||-|| .|+|+.++..|+++. .+++++|||.++++++++++.... .+..+..+|+.|.+++.+++...
T Consensus 2 rVlITGassGIG~alA~~la~~G---~~V~l~~r~~~~l~~~~~~l~~~g-----~~~~~~~~Dvt~~~~~~~~~~~v~~ 73 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREG---WRLALADVNEEGGEETLKELREAG-----GDGFYQRCDVRDYSQLTALAQACEE 73 (270)
T ss_pred EEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 79998876499999999999889---989999798899999999998449-----9289998458999999999999999
Q ss_pred ---CCCEEEECCCCCCC
Q ss_conf ---97299973761003
Q gi|254780742|r 81 ---NSQIIINVGSSFLN 94 (419)
Q Consensus 81 ---~~dvVin~~~p~~~ 94 (419)
..|++||.+|-...
T Consensus 74 ~~g~iDiLVNNAGi~~~ 90 (270)
T PRK05650 74 KWGGIDVIVNNAGVASG 90 (270)
T ss_pred HHCCCCEEEECCCCCCC
T ss_conf 83997789624766799
No 75
>PRK05855 short chain dehydrogenase; Validated
Probab=98.54 E-value=1.5e-06 Score=62.94 Aligned_cols=82 Identities=18% Similarity=0.198 Sum_probs=68.3
Q ss_pred CEEEEECCC-HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 319998498-779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGAG-GVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~GaG-~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-||| ++|+.++..|+++.- +++++|||.+.++++++++.... .......+|+.|.+++.+++...
T Consensus 316 KvAvVTGA~sGIGrA~A~~fA~~GA---~Vvl~Dr~~~~l~eta~ei~~~G-----~~a~~~~~DVtd~~av~al~~~v~ 387 (582)
T PRK05855 316 KLVVVTGAGSGIGRATALAFAREGA---EVVASDIDEAAAERTAALIRAAG-----AVAHAYRVDVSDADAMEALAEWVG 387 (582)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 5899958757899999999997799---99996079999999999999519-----848999755899999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 388 ~~~G~iDILVNNAGI~ 403 (582)
T PRK05855 388 AEHGVPDIVVNNAGIG 403 (582)
T ss_pred HHCCCCCEEEECCCCC
T ss_conf 9769999999898758
No 76
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.54 E-value=1.7e-06 Score=62.67 Aligned_cols=84 Identities=19% Similarity=0.267 Sum_probs=69.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||-|+ +++|+.++..|+++.- ++++.+|+.++++++++++.... .+....++|+.|.+++.+++++.
T Consensus 10 gKvalITGgs~GIG~aia~~la~~Ga---~V~i~~~~~~~l~~~~~~i~~~g-----~~~~~~~~Dv~~~~~v~~~v~~~ 81 (263)
T PRK07814 10 GQVAVVTGAGRGLGAAIALAFAEAGA---DVLIAARTESQLDEVAEQIRAAG-----RRAHVVAADLAHPEATAGLAGQA 81 (263)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHHHH
T ss_conf 99899958966899999999998799---89999698999999999998529-----92899981589999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.++...
T Consensus 82 ~~~~G~iDiLVnNAg~~~ 99 (263)
T PRK07814 82 VEAFGRLDIVVNNVGGTM 99 (263)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998299889998986678
No 77
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=98.53 E-value=3.2e-06 Score=60.76 Aligned_cols=104 Identities=23% Similarity=0.346 Sum_probs=79.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH---------------------HHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 7319998498779999999996089872599963999---------------------9999999873430245555573
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL---------------------QKCSKIIDSIYKKKSLKIDGKL 60 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~---------------------~~~~~~~~~l~~~~~~~~~~~~ 60 (419)
+.+|+|+|+|+.|+.++.+|++.. + .+|++.|+|. -|+...++.+...++ ..++
T Consensus 24 ~a~VlVvGaGGLGs~~a~~La~aG-V-G~i~ivD~D~Ve~SNL~RQ~L~~e~Dig~~~pKa~aA~~~L~~iNp---~v~I 98 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAG-V-GKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINS---EVRV 98 (339)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCC---CCEE
T ss_conf 297899877777799999999848-9-8299980999246678865065621332263779999999983499---8605
Q ss_pred EEEEECCCCHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECC
Q ss_conf 08994378989999999753972999737610-032789999862886896036
Q gi|254780742|r 61 AIHQVDALNIKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 61 ~~~~~D~~d~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~ 113 (419)
+....++ +.+.+.+++++ .|+||+|.--| ..+.+-++|.++++++|--+-
T Consensus 99 ~~~~~~l-~~~n~~~li~~--~DlViD~tDNf~tR~liNd~c~~~~~PlV~ga~ 149 (339)
T PRK07688 99 EAIVQDV-TAEELEELVTN--VDVIIDATDNFETRFIVNDAAQKYSIPWIYGAC 149 (339)
T ss_pred EEEECCC-CHHHHHHHHHC--CCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 8760039-98999999851--889998788999999999999995999899988
No 78
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.53 E-value=1.8e-06 Score=62.42 Aligned_cols=80 Identities=18% Similarity=0.286 Sum_probs=67.5
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC--
Q ss_conf 1999849-8779999999996089872599963999999999987343024555557308994378989999999753--
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT-- 80 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-- 80 (419)
||||-|+ +++|+.+++.|+++.. ++++.||+.++++++++++... .++...++|+.|.+++.+++++.
T Consensus 2 nVlITGas~GIG~aiA~~la~~Ga---~V~i~~r~~~~l~~~~~~l~~~------g~~~~~~~Dv~~~~~v~~~v~~~~~ 72 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA---RVVISSRNEENLEKALKELKEL------GEVYAIKADLSDKDDLKNLVKEAWE 72 (259)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHC------CCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 899975877899999999998799---9999979989999999998741------8879999636998999999999999
Q ss_pred ---CCCEEEECCCCC
Q ss_conf ---972999737610
Q gi|254780742|r 81 ---NSQIIINVGSSF 92 (419)
Q Consensus 81 ---~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 73 ~~G~iD~LVnNAg~~ 87 (259)
T PRK08340 73 LLGGIDALVWNAGNV 87 (259)
T ss_pred HHCCCCEEEECCCCC
T ss_conf 859988899857667
No 79
>PRK06194 hypothetical protein; Provisional
Probab=98.53 E-value=1.6e-06 Score=62.82 Aligned_cols=82 Identities=15% Similarity=0.148 Sum_probs=68.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++.. .+++++||+.++++++++++.... .++....+|+.|.+++.++++..
T Consensus 7 KvavITGassGIG~a~A~~la~~G---a~Vvl~d~~~~~l~~~~~~l~~~g-----~~v~~~~~DVsd~~~v~~l~~~~~ 78 (301)
T PRK06194 7 KVAVITGAASGFGREFARIGARLG---MKLVLADVQQDALDRAVAELRAQG-----AEVLGVRTDVSDAAQVEALADAAL 78 (301)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 989992737799999999999879---989999798899999999998459-----849999656899999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 79 ~~fG~iDiLVNNAGi~ 94 (301)
T PRK06194 79 ERFGAVHLLFNNAGVG 94 (301)
T ss_pred HHHCCEEEEEECCCCC
T ss_conf 9839937999557667
No 80
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=98.52 E-value=8.2e-07 Score=64.76 Aligned_cols=95 Identities=24% Similarity=0.419 Sum_probs=66.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.|+|||+|+|.+|+.++++|.++.- .+++++.|+.+|+++++++++.. .++.. + -+++.+.+. .
T Consensus 12 ~~~vlVIGaG~~~~~~~~~L~~~g~--~~i~v~nRt~~ka~~la~~~~~~-------~~~~~--~---~~~l~~~l~--~ 75 (134)
T pfam01488 12 GKKVLLIGAGEMARLAAKHLLSKGA--KKITIANRTLEKAKELAEEFGGE-------EVEAL--P---LDELEELLA--E 75 (134)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--CEEEEECCCHHHHHHHHHHCCCC-------CEEEE--E---CHHHHHHHH--H
T ss_conf 8989999960999999999997599--88999547578999999984997-------25898--5---135441363--1
Q ss_pred CCEEEECCCCC---CCHHHHHHHHHCCCCEEEECC
Q ss_conf 72999737610---032789999862886896036
Q gi|254780742|r 82 SQIIINVGSSF---LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 82 ~dvVin~~~p~---~~~~v~~a~i~~g~hyvD~s~ 113 (419)
+|+||+|.+.. +....++.+ ....-++|++-
T Consensus 76 ~DivI~aT~s~~~ii~~~~~~~~-~~~~~iiDLav 109 (134)
T pfam01488 76 ADIVISATSAPTPIITKEMVEEA-LKGLLFVDIAV 109 (134)
T ss_pred CCEEEEECCCCCCEECHHHHHHC-CCCEEEEEECC
T ss_conf 99999925999736489999744-39859998347
No 81
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.52 E-value=1.7e-06 Score=62.67 Aligned_cols=83 Identities=13% Similarity=0.196 Sum_probs=69.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|+++.- ++++.||+.++++++++++... ..+....++|+.|.+++.++++..
T Consensus 13 KvalVTG~s~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~l~~~-----g~~~~~~~~Dv~~~~~v~~~v~~~~ 84 (259)
T PRK08213 13 KTALVTGGSRGLGLQIAEALGEAGA---RVVLSARKAEELEEAAAHLEAL-----GIDALWLAADVADEADIERLAEETL 84 (259)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9899948776899999999998699---9999979889999999999954-----9958999826899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|...
T Consensus 85 ~~~G~iDiLVNNAG~~~ 101 (259)
T PRK08213 85 ERFGHIDILVNNAGATW 101 (259)
T ss_pred HHHCCCCEEEECCCCCC
T ss_conf 98399989998997788
No 82
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.52 E-value=2.3e-06 Score=61.76 Aligned_cols=84 Identities=24% Similarity=0.268 Sum_probs=69.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||.|+ +++|+.+++.|+++.. ++++.||+.++++++++++... ..++...++|+.|.+++.++++..
T Consensus 4 gK~alITGas~GIG~aia~~la~~Ga---~V~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~D~~~~~~v~~~~~~~ 75 (258)
T PRK12429 4 GKTALVTGAASGIGLEIALALAKEGA---KVVIADLNDEAAAKAAEAIKKA-----GGKAIGVAMDVTDEEAINAGIDKV 75 (258)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 59899948875899999999998799---9999979889999999999844-----991899983589999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|...
T Consensus 76 ~~~~g~iDiLVnnAG~~~ 93 (258)
T PRK12429 76 VETFGGVDILVNNAGIQH 93 (258)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998299709998998889
No 83
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.52 E-value=2.2e-06 Score=61.81 Aligned_cols=82 Identities=18% Similarity=0.298 Sum_probs=67.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||-|+ +++|+.+++.|+++.- ++++.+|+.++++++++++.... .+....+.|+.|.+++.++++..
T Consensus 5 gK~alVTG~s~GIG~aia~~la~~Ga---~V~i~~r~~~~l~~~~~~i~~~g-----~~~~~~~~Dv~~~~~~~~~v~~~ 76 (258)
T PRK07890 5 DKVVVVSGVGPGLGTTLAVRAAREGA---DVVLAARTAERLDEVAKQIDDLG-----RRALAVVTDITDEAQVANLVDAA 76 (258)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHH
T ss_conf 98899968565899999999998799---89999798999999999999649-----95899981699999999999999
Q ss_pred -----CCCEEEECCCC
Q ss_conf -----97299973761
Q gi|254780742|r 81 -----NSQIIINVGSS 91 (419)
Q Consensus 81 -----~~dvVin~~~p 91 (419)
+.|++||.++.
T Consensus 77 ~~~fG~iDiLVnnAg~ 92 (258)
T PRK07890 77 LERFGRVDVLVNNAFR 92 (258)
T ss_pred HHHHCCCCEEEECCCC
T ss_conf 9984999899986866
No 84
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.52 E-value=2e-06 Score=62.20 Aligned_cols=80 Identities=16% Similarity=0.297 Sum_probs=66.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||.|+ +++|+.++..|+++.. ++++.|||.++++++++++.. .+....++|+.|.+++.++++..
T Consensus 7 K~alITGgs~GIG~aia~~la~~G~---~V~i~~r~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~~~~~~~~~~ 76 (250)
T PRK07231 7 KVAIVTGAGSGFGEGIARRFAAEGA---RVVVTDRNQEAAERVAAEIRG-------GRAIAVAADVSDEADVRAAVEAAL 76 (250)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHCC-------CCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 8899938886899999999998799---999997988999999998449-------967999930799999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|..
T Consensus 77 ~~~g~iD~lInnAG~~ 92 (250)
T PRK07231 77 ERFGSVDILVNNAGTT 92 (250)
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9819971999888337
No 85
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.51 E-value=2.2e-06 Score=61.85 Aligned_cols=82 Identities=17% Similarity=0.248 Sum_probs=68.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++..- ++++.||+.++++++++++.... .+....+.|+.|.+++.++++..
T Consensus 7 KvalVTGas~GIG~aiA~~la~~Ga---~Vvi~~r~~~~l~~~~~ei~~~g-----~~~~~~~~Dvt~~~~v~~~v~~~~ 78 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGA---KVVVGARRQAELDQLVAEIRAEG-----GEAVALAGDVRDEAYAKALVALAV 78 (254)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 8799958876899999999998799---99999798899999999999649-----908999768999999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 79 ~~~G~iDiLVNNAG~~ 94 (254)
T PRK07478 79 ERFGGLDIAFNNAGIL 94 (254)
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9849998999887436
No 86
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.51 E-value=2.2e-06 Score=61.93 Aligned_cols=93 Identities=24% Similarity=0.423 Sum_probs=70.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.|+|||+|+|-||+.++.+|.+++- .+|+|+.|+.+|++.++++++. . +.+-+.+.+.+. .
T Consensus 182 ~~~vlviGaGem~~l~~k~L~~~g~--~~i~v~nRt~~ra~~la~~~~~----------~-----~~~~~~l~~~l~--~ 242 (429)
T PRK00045 182 GKKVLVIGAGEMGELVAKHLAEKGV--RKITVANRTLERAEELAEEFGA----------E-----AIPLEELPEALA--E 242 (429)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--CEEEEECCCHHHHHHHHHHCCC----------E-----EECHHHHHHHHH--H
T ss_conf 0659997674899999999985599--8499975867789999997598----------8-----974999999996--5
Q ss_pred CCEEEECCCCC---CCHHHHHHHHHCCC----CEEEECC
Q ss_conf 72999737610---03278999986288----6896036
Q gi|254780742|r 82 SQIIINVGSSF---LNMSVLRACIDSNV----AYIDTAI 113 (419)
Q Consensus 82 ~dvVin~~~p~---~~~~v~~a~i~~g~----hyvD~s~ 113 (419)
+|+||+|.+.. .....++.+..... =++|++-
T Consensus 243 ~DvvisaT~s~~~ii~~~~~~~~~~~r~~~~~~iiDLav 281 (429)
T PRK00045 243 ADIVISSTAAPHPIITKGMVERALKQRRHRPLLLIDLAV 281 (429)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 899999448997502799999998734699569996168
No 87
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.51 E-value=2.2e-06 Score=61.83 Aligned_cols=79 Identities=11% Similarity=0.141 Sum_probs=65.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|.++|-|+ +++|+.+++.|+++.- +++++|||.++++++++++. +.....+|+.|.+++.++++..
T Consensus 5 gKvvlITGassGIG~a~A~~la~~Ga---~V~i~~r~~~~l~~~~~~~~---------~~~~~~~DVtd~~~v~~~~~~~ 72 (273)
T PRK07825 5 GKVIAITGGARGIGLATARALAALGA---KVAIGDLDEALAKESAAELG---------LVVGGPLDVTDPASFAAFLDAV 72 (273)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCC---------CCEEEECCCCCHHHHHHHHHHH
T ss_conf 98899926233999999999998799---89999799999999998607---------8559991479999999999999
Q ss_pred -----CCCEEEECCCCC
Q ss_conf -----972999737610
Q gi|254780742|r 81 -----NSQIIINVGSSF 92 (419)
Q Consensus 81 -----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 73 ~~~~G~iDiLVNNAGi~ 89 (273)
T PRK07825 73 EADLGPIDVLVNNAGIM 89 (273)
T ss_pred HHHHCCCCEEEECCCCC
T ss_conf 99709977899878778
No 88
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.51 E-value=3.4e-06 Score=60.55 Aligned_cols=135 Identities=18% Similarity=0.284 Sum_probs=92.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH---HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 7319998498779999999996089872599963999---9999999873430245555573089943789899999997
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL---QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
.|+++|+|+|+.+++++..|+.+.. .++.+..|+. +|++..++.+.... +.......+..+.+.+.+.+.
T Consensus 126 ~k~vlIlGaGGaa~ai~~~l~~~g~--~~i~i~nr~~~~~~ra~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 198 (289)
T PRK12548 126 GKKLTIIGAGGAATAIQVQCALDGA--KEITIFNIKDDFYERAEQTVAKIKEEV-----PACIVHVYDLNDTEKLNAEIA 198 (289)
T ss_pred CCEEEEEECCHHHHHHHHHHHHCCC--CEEEEEECCCHHHHHHHHHHHHHHHHC-----CCCEEEEECCCCHHHHHHHHC
T ss_conf 7747999521679999999997699--889999688148899999999998458-----776479851431666655432
Q ss_pred HCCCCEEEECCCCCC----C-HHHHH-HHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHH
Q ss_conf 539729997376100----3-27899-99862886896036642000014420000357751088885188699537501
Q gi|254780742|r 79 KTNSQIIINVGSSFL----N-MSVLR-ACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFD 152 (419)
Q Consensus 79 ~~~~dvVin~~~p~~----~-~~v~~-a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~ 152 (419)
.+|++|||.+--+ + .++.. ..+..+.-.+|+.|....+ .+-.+|++.|..++.|.
T Consensus 199 --~~dliINaT~~Gm~p~~~~~~~~~~~~~~~~~~v~D~vY~P~~T--------------~ll~~A~~~G~~~i~Gl--- 259 (289)
T PRK12548 199 --TSDILVNATLVGMHPNEDETPIKDTSVFRKDLVVADTVYNPKKT--------------KLLEDAEAAGCKTVGGL--- 259 (289)
T ss_pred --CCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCC--------------HHHHHHHHCCCEEECHH---
T ss_conf --26744533565668775568887866738897899831388478--------------99999998829685729---
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 11488999999997
Q gi|254780742|r 153 PGVVNAFARLAQDE 166 (419)
Q Consensus 153 PGl~~lla~~~~~~ 166 (419)
+|+..+++.+
T Consensus 260 ----~MLv~Qa~~~ 269 (289)
T PRK12548 260 ----GMLLWQGAEA 269 (289)
T ss_pred ----HHHHHHHHHH
T ss_conf ----9999999999
No 89
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.50 E-value=2.5e-06 Score=61.50 Aligned_cols=80 Identities=16% Similarity=0.233 Sum_probs=67.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++..- +++++||+.++++++++++. .+....++|+.|.+++.++++..
T Consensus 6 KvalVTGas~GIG~aia~~la~~Ga---~V~i~d~~~~~~~~~~~~~g--------~~~~~~~~Dvt~~~~v~~~v~~~~ 74 (256)
T PRK07067 6 KVALLTGAASGIGEAVAQRYLREGA---RVVLADIKPARAALAALEIG--------PAAVAVSLDVTRQDSIDRIVAAAV 74 (256)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHC--------CCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 8899937677899999999998799---99999798899999999819--------975999984899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 75 ~~~G~iDiLVNNAGi~~ 91 (256)
T PRK07067 75 ERFGGIDILVNNAALFD 91 (256)
T ss_pred HHCCCCCEEEECCCCCC
T ss_conf 98199989998998899
No 90
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.50 E-value=2.3e-06 Score=61.70 Aligned_cols=88 Identities=15% Similarity=0.203 Sum_probs=70.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.|.|||-|| .|+|+.++..|++... ++++.+|+.++++++.+.+... ...+....+|+.|..+.......
T Consensus 1 MgK~vLITGAssGIGraiA~~la~~G~---~Vi~~~r~~~~l~~l~~~~~~~-----g~~~~~~~lDv~~~~~~~~~~~~ 72 (257)
T PRK09291 1 MSKTILITGAGSGFGREVALRLARKGH---RVIAGVQIAPQVTELRAEAARR-----GLALRVEKLDLTDAIDRARAAEW 72 (257)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHCCC
T ss_conf 999899968985899999999998799---8999968789999999999852-----99559998988999999998089
Q ss_pred CCCCEEEECCCCCCCHHH
Q ss_conf 397299973761003278
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSV 97 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v 97 (419)
..|++||.+|.....++
T Consensus 73 -~iDvLVNNAGi~~~g~i 89 (257)
T PRK09291 73 -DVDVLLNNAGIGEAGAL 89 (257)
T ss_pred -CCCEEEECCCCCCCCCH
T ss_conf -99999989856899773
No 91
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=98.50 E-value=3.9e-06 Score=60.23 Aligned_cols=104 Identities=26% Similarity=0.391 Sum_probs=76.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH---------------------HHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 7319998498779999999996089872599963999---------------------9999999873430245555573
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL---------------------QKCSKIIDSIYKKKSLKIDGKL 60 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~---------------------~~~~~~~~~l~~~~~~~~~~~~ 60 (419)
+++|+|+|+|+.|+.++.+|++.. + .++++.|+|. .|+...++.+.+.++ .-++
T Consensus 24 ~s~VlIVGaGGLGs~~a~~La~aG-V-G~l~ivD~D~Ve~SNL~RQ~L~~~~Dig~~k~Ka~aA~~~L~~iNp---~v~I 98 (337)
T PRK12475 24 EKHVLIIGAGALGAANAEALVRAG-I-GKLTIADRDYVEWSNLQRQQLYTEEDAKQYKPKAIAAAEHLRKINS---EVEI 98 (337)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCC---CCCE
T ss_conf 396999977777899999999828-9-8699984998314467453002221215574889999999984499---9744
Q ss_pred EEEEECCCCHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECC
Q ss_conf 08994378989999999753972999737610-032789999862886896036
Q gi|254780742|r 61 AIHQVDALNIKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 61 ~~~~~D~~d~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~ 113 (419)
+....++ +.+.+.+++++ .|+||+|.--| ..+.+-++|+++++++|--+-
T Consensus 99 ~~~~~~l-~~~n~~~li~~--~DlViD~tDNf~tR~liNd~c~~~~~PlV~ga~ 149 (337)
T PRK12475 99 VPVVTDV-TVEEMEELIKE--VDLIIDATDNFDTRLLINDISQKYNIPWIYGGC 149 (337)
T ss_pred EEEHHCC-CHHHHHHHHHH--CCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 7513119-97999999861--889998888999999999999996999899887
No 92
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.50 E-value=2.9e-06 Score=61.09 Aligned_cols=84 Identities=14% Similarity=0.206 Sum_probs=69.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|.+||.|+ +++|+.+++.|+++.- ++++.+|+.++++++++++... ..+.....+|+.|.+++.+++++.
T Consensus 14 gK~alITGgs~GIG~~ia~~la~~Ga---~V~i~~r~~~~~~~~~~~l~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~ 85 (259)
T PRK06124 14 GQVALVTGSARGLGLEIARALAEAGA---HVLVNGRNAARVEAAVAALRAA-----GGAAEALVFDISDEEAVAAAFARI 85 (259)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHC-----CCCEEEEEECCCCHHHHHHHHHHH
T ss_conf 99899928674899999999998799---9999969889999999999965-----995899995179999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|...
T Consensus 86 ~~~~g~iDiLVnnAG~~~ 103 (259)
T PRK06124 86 DAEHGRLDILVNNVGARN 103 (259)
T ss_pred HHHCCCCCEEEECCCCCC
T ss_conf 997599979998988899
No 93
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.50 E-value=2.8e-06 Score=61.13 Aligned_cols=83 Identities=24% Similarity=0.337 Sum_probs=68.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++..- ++++.|||.++++++.+++... ..++...++|+.|.+++.+++++.
T Consensus 4 K~alVTGgs~GIG~aia~~la~~Ga---~V~i~~r~~~~l~~~~~~i~~~-----g~~~~~~~~Dv~~~~~v~~~v~~~~ 75 (254)
T PRK07677 4 KVVIITGGSSGMGKAMAKRFAEEGA---NVVITGRTKEKLEEAKLEIEQF-----PGQVLTVQMDVRNPDDVQKMIEQID 75 (254)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9899958767899999999998799---9999969999999999999856-----9909999803899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.++..+
T Consensus 76 ~~~g~iDiLVnNAg~~~ 92 (254)
T PRK07677 76 EKFGRIDALINNAAGNF 92 (254)
T ss_pred HHHCCCCEEEECCCCCC
T ss_conf 98399888997575577
No 94
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.50 E-value=2.1e-06 Score=62.06 Aligned_cols=88 Identities=17% Similarity=0.249 Sum_probs=67.8
Q ss_pred CCC-EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHH-
Q ss_conf 973-1999849-8779999999996089872599963999999999987343024555557308994378989999999-
Q gi|254780742|r 1 MKK-NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELI- 77 (419)
Q Consensus 1 M~k-~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~- 77 (419)
|++ .+||-|| .|+|+.++..|+++. .++++.+||.++++++.+++..... ..++....+|+.|.+++..+.
T Consensus 1 l~~K~alITGassGIG~a~A~~la~~G---~~V~~~~r~~~~~~~l~~~~~~~~~---~~~~~~~~~Dvtd~~~v~~~~~ 74 (280)
T PRK06914 1 MNKKIAIITGASSGFGLLTTLELAKKD---YLVIATMRNLEKQENLISQAAQLNL---SQNIKVQQLDVTDQNSIHNFQL 74 (280)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHCCC---CCCEEEEECCCCCHHHHHHHHH
T ss_conf 951989990734499999999999879---9899998988999999999996499---9766999688999999999999
Q ss_pred --HHC-CCCEEEECCCCCCC
Q ss_conf --753-97299973761003
Q gi|254780742|r 78 --KKT-NSQIIINVGSSFLN 94 (419)
Q Consensus 78 --~~~-~~dvVin~~~p~~~ 94 (419)
+.. +.|++||.+|....
T Consensus 75 ~~~~~g~iDvLVNNAG~~~~ 94 (280)
T PRK06914 75 FLKEYGRIDLLVNNAGYANG 94 (280)
T ss_pred HHHHHCCCCEEEECCCCCCC
T ss_conf 99982998789978866778
No 95
>PRK06346 consensus
Probab=98.50 E-value=2.5e-06 Score=61.51 Aligned_cols=82 Identities=16% Similarity=0.339 Sum_probs=68.7
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|+++.. ++++.|||.++++++++++.... .+....+.|+.|.+++.+++++.
T Consensus 6 Kv~lITGgs~GIG~a~a~~la~~Ga---~V~i~~r~~e~~~~~~~~l~~~~-----~~~~~~~~Dv~~~~~v~~~i~~~~ 77 (251)
T PRK06346 6 KVAIVTGAASGMGKSIAELFAKEGA---KVVVADLNLERAQKVVEEITSNG-----GTAIAVVANVTKQEDIENMVDTAV 77 (251)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 8899947578899999999998799---89999798999999999999639-----908999778898999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.++-+
T Consensus 78 ~~fg~iDiLVnNAgi~ 93 (251)
T PRK06346 78 DTYGTLDILVNNAGIM 93 (251)
T ss_pred HHCCCCCEEEECCCCC
T ss_conf 9829997999899889
No 96
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.50 E-value=2.3e-06 Score=61.78 Aligned_cols=82 Identities=18% Similarity=0.272 Sum_probs=68.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|+++.- ++++.||+.++++++++++.. ..+....++|+.|.+++.++++..
T Consensus 6 KvalVTGas~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~------~~~~~~~~~Dvs~~~~v~~~~~~~~ 76 (252)
T PRK06138 6 RVAIVTGAGSGIGRATAKLFAREGA---RVVVADRDAEAAERVAAAIAA------GGRAFARQGDVGSAEAVEALVDFVA 76 (252)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHC------CCCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 8899947467999999999998799---899996887899999999837------9919999942899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 77 ~~~G~iDiLVNNAG~~~ 93 (252)
T PRK06138 77 ARWGRLDVLVNNAGFGC 93 (252)
T ss_pred HHCCCCCEEEECCCCCC
T ss_conf 98299989998988999
No 97
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.49 E-value=2.4e-06 Score=61.63 Aligned_cols=82 Identities=20% Similarity=0.279 Sum_probs=68.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++... ++++.||+.++++++++++.... .+....++|+.|.+++++++...
T Consensus 10 K~alVTG~~~GIG~aiA~~la~~Ga---~Vvi~~~~~~~~~~~~~~l~~~g-----~~~~~~~~Dvtd~~~v~~~v~~~~ 81 (254)
T PRK08085 10 KNILITGSAQGIGFLLATGLAEYGA---EIIINDITAERAEKAVAKLRQEG-----IKAHAAAFNVTHKQEIEAAIEHIE 81 (254)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9899968567899999999998699---99999698899999999998449-----818999826899999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 82 ~~~G~iDilVnNAG~~ 97 (254)
T PRK08085 82 KDIGPIDVLINNAGIQ 97 (254)
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9839986999898678
No 98
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.49 E-value=2.7e-06 Score=61.25 Aligned_cols=80 Identities=20% Similarity=0.233 Sum_probs=66.7
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|+++.- ++++.||+.+++++.++++.. .....++|+.|.+++.++++..
T Consensus 10 K~alVTG~s~GIG~aiA~~la~~Ga---~Vvi~~r~~~~l~~~~~~l~~--------~~~~~~~Dvtd~~~v~~~v~~~~ 78 (251)
T PRK07523 10 RRALITGSSQGIGYALAKGLAQAGA---EVILNGRDAAKLAAAAESLKG--------SAHTLAFDVTDHDAVRAAIDAFE 78 (251)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCCC--------CCEEEEEECCCHHHHHHHHHHHH
T ss_conf 9899958366999999999998799---999996998999999998188--------72799995799999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 79 ~~~G~iDiLVNNAG~~~ 95 (251)
T PRK07523 79 AEIGPIDILVNNAGMQH 95 (251)
T ss_pred HHCCCCCEEEECCCCCC
T ss_conf 97599869998988799
No 99
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=98.49 E-value=6.4e-06 Score=58.73 Aligned_cols=141 Identities=14% Similarity=0.172 Sum_probs=103.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
+|.++|||.+|..+++.+-...-.+..+.+.||+.+|++.+.+++.... .++.+ +++. .+|
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~--------------~s~id---e~~~--~~D 62 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRC--------------VSDID---ELIA--EVD 62 (255)
T ss_pred EEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCC--------------CCCHH---HHHH--CCC
T ss_conf 5789823378899999986688643699994488788888886038876--------------35677---7730--244
Q ss_pred EEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH
Q ss_conf 99973761003278999986288689603664200001442000035775108888518869953750111488999999
Q gi|254780742|r 84 IIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAFARLA 163 (419)
Q Consensus 84 vVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~lla~~~ 163 (419)
+++-|+.+.--...+.-++++|+|++-+|-.- +. -......+.+.|+..|..+-.-.|.-.|++-+.+..
T Consensus 63 lvVEaAS~~Av~e~~~~~L~~g~d~iV~SVGA--La-------d~~l~erl~~lak~~~~rv~~pSGAiGGlD~l~aar- 132 (255)
T COG1712 63 LVVEAASPEAVREYVPKILKAGIDVIVMSVGA--LA-------DEGLRERLRELAKCGGARVYLPSGAIGGLDALAAAR- 132 (255)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCEEEEECHH--CC-------CHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH-
T ss_conf 25430788999998699996599889995122--06-------867999999998538947993376401278888743-
Q ss_pred HHHHCCCCCEEEEE
Q ss_conf 99743666389763
Q gi|254780742|r 164 QDEYFDKITDIDII 177 (419)
Q Consensus 164 ~~~~~d~~~~i~~~ 177 (419)
+ +.+++|...
T Consensus 133 ---~-g~i~~V~lt 142 (255)
T COG1712 133 ---V-GGIEEVVLT 142 (255)
T ss_pred ---C-CCEEEEEEE
T ss_conf ---2-770279997
No 100
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.49 E-value=2.3e-06 Score=61.70 Aligned_cols=79 Identities=11% Similarity=0.270 Sum_probs=65.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||.|+ +++|+.+++.|+++.. ++++.||+.++++++.++++ .++...+.|+.|.+++.++++..
T Consensus 7 K~alVTGas~GIG~aia~~l~~~Ga---~V~~~~r~~~~l~~~~~~~~--------~~~~~~~~Dv~~~~~~~~~~~~~~ 75 (263)
T PRK06200 7 QVALITGGGSGIGRALVERFLAEGA---RVAVLERSAEKCASLRQRFG--------DDVLVVEGDVTSYADNQRAVAQTV 75 (263)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHC--------CCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 8899958667999999999998799---99999799999999999818--------864687179999999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||++|.+
T Consensus 76 ~~~G~iDiLVnnAG~~ 91 (263)
T PRK06200 76 DRFGKLDCFVGNAGIW 91 (263)
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9849988899757546
No 101
>TIGR00507 aroE shikimate 5-dehydrogenase; InterPro: IPR011342 The shikimate pathway links the metabolism of carbohydrates to the biosynthesis of aromatic compounds and is essential for the biosynthesis of aromatic amino acids and other aromatic compounds in bacteria, eukaryotic microorganisms and plants . It is a seven-step pathway which converts phosphoenolpyruvate and erythrose 4-phosphate to chorismate, the common precursor for the synthesis of folic acid, ubiquinone, vitamins E and K, and aromatic amino acids. Since this pathway is absent in metazoans, which must therefore obtain the essential amino acids phenylalanine and tryptophan from their diet, the enzymes in this pathway are important targets for the development of novel herbicides and antimicrobial compounds. This entry represents shikimate 5-dehydrogenases from prokaryotes and functionally equivalent C-terminal domains from larger, multifunctional proteins, the majority of which have an N-terminal quinate dehydrogenase domain. These multifunctional proteins occur in plants, chlamydiae, planctomycetes and a limited number of marine proteobacteria. Shikimate 5-dehydrogenase catalyses the fourth step of the shikimate pathway, which is the NADP-dependent reduction of 3-dehydroshikimate to shikimate . Structural studies suggests that some shikimate dehydrogenases are monmers while others form homodimers , . Each shikimate dehydrogenase monomer forms a compact two-domain alpha/beta sandwich with a deep interdomain cleft. The N-terminal substrate-binding domain forms a three layer alpha-beta-alpha sandwich, while the C-terminal NADP-binding domain forms a nearly typical Rossman fold. The active site is thought to be located within the interdomain cleft, with substrate binding causing a conformational change which closes the active site cleft, forming a productive active site.; GO: 0004764 shikimate 5-dehydrogenase activity, 0050661 NADP binding.
Probab=98.49 E-value=1.4e-06 Score=63.17 Aligned_cols=132 Identities=25% Similarity=0.352 Sum_probs=94.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.++|||+||||-+++++-.|.+..+ .+|+|+-|+.+|++++++.+....+... ..+.....| +. ..++
T Consensus 121 ~~~~li~GAGGAa~a~a~~L~~~t~--~~~~i~NRT~~ka~~La~~~~~kln~~~-G~~~~~~~~--~~-------~l~~ 188 (286)
T TIGR00507 121 NQRVLIIGAGGAAKAVALELLKATD--CNVIIANRTVEKAEELAERFQRKLNKKY-GEIQAFSLD--EV-------PLHK 188 (286)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHHHHHHHC-CCEEEEECC--CC-------CCCC
T ss_conf 9779999428678999999986009--9789982877899999999898853424-853652113--35-------5557
Q ss_pred --CCEEEECCCCCCCH-----HHHHHHHHCCCCEEEECCCCC-CHHCCCCCCCCHHHHHHHHHHHHHCC-CEEEECCCHH
Q ss_conf --72999737610032-----789999862886896036642-00001442000035775108888518-8699537501
Q gi|254780742|r 82 --SQIIINVGSSFLNM-----SVLRACIDSNVAYIDTAIHES-PLKICESPPWYNNYEWSLLDECRTKS-ITAILGAGFD 152 (419)
Q Consensus 82 --~dvVin~~~p~~~~-----~v~~a~i~~g~hyvD~s~~~~-~~~~~~~~~~~~~~~~~l~~~a~~ag-~~~i~~~G~~ 152 (419)
.|+||||.++.+.. +|-.-.+..+.-.+|+.|.-- .. .|=++||+.| ..++-|.|
T Consensus 189 G~~DlIINATs~G~~~~~~~~~v~~~~~~~~~~v~D~~Y~p~t~T--------------pfl~~Ak~~g~~~~~dG~g-- 252 (286)
T TIGR00507 189 GKVDLIINATSAGMSGNIDEPPVPAELLKEGKLVYDLVYNPLTET--------------PFLKEAKKRGLTKVIDGLG-- 252 (286)
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCC--------------HHHHHHHHCCCCCCCCCHH--
T ss_conf 856799854677888898874568534168868995146886557--------------7899998768856545304--
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 11488999999997
Q gi|254780742|r 153 PGVVNAFARLAQDE 166 (419)
Q Consensus 153 PGl~~lla~~~~~~ 166 (419)
||+.+++..
T Consensus 253 -----MLv~QAA~~ 261 (286)
T TIGR00507 253 -----MLVAQAALS 261 (286)
T ss_pred -----HHHHHHHHH
T ss_conf -----589999986
No 102
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.49 E-value=2.1e-06 Score=62.08 Aligned_cols=90 Identities=23% Similarity=0.273 Sum_probs=71.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.++|-|| .++|..+++.|++..- ++++++|+.++++++++++.. ..+....+|+.|.+++.+++...
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~---~vvl~aRR~drL~~la~~~~~-------~~~~~~~~DVtD~~~~~~~i~~~~ 76 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGA---KVVLAARREERLEALADEIGA-------GAALALALDVTDRAAVEAAIEALP 76 (246)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHCC-------CCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 6899946865688999999997899---699986368899999986256-------743789613678899999999999
Q ss_pred ----CCCEEEECCCCCCCHHHHHHHH
Q ss_conf ----9729997376100327899998
Q gi|254780742|r 81 ----NSQIIINVGSSFLNMSVLRACI 102 (419)
Q Consensus 81 ----~~dvVin~~~p~~~~~v~~a~i 102 (419)
+.|+++|-+|-..+.++.++-.
T Consensus 77 ~~~g~iDiLvNNAGl~~g~~~~~~~~ 102 (246)
T COG4221 77 EEFGRIDILVNNAGLALGDPLDEADL 102 (246)
T ss_pred HHHCCCCEEEECCCCCCCCHHHHCCH
T ss_conf 75176058996687776870354899
No 103
>PRK08017 short chain dehydrogenase; Provisional
Probab=98.48 E-value=3.2e-06 Score=60.77 Aligned_cols=79 Identities=16% Similarity=0.109 Sum_probs=62.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|+|.|||.|| +++|+.+++.|+++. .++++++|+.++++++.+ ..++...+|+.|.+++.+++.+
T Consensus 1 M~K~vlITGassGIG~a~A~~la~~G---~~V~~~~r~~~~l~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~ 66 (256)
T PRK08017 1 MQKSVLITGCSSGIGLESALELKRQG---FRVLAGCRKPDDVARMNS-----------MGFTGVLIDLDSPESVDRAADE 66 (256)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHH-----------CCCCEEEEECCCHHHHHHHHHH
T ss_conf 99789996587689999999999879---999999699899999985-----------6994699835898999999999
Q ss_pred C------CCCEEEECCCCCC
Q ss_conf 3------9729997376100
Q gi|254780742|r 80 T------NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~------~~dvVin~~~p~~ 93 (419)
. ..|++||.+|...
T Consensus 67 ~~~~~~g~id~linnAG~~~ 86 (256)
T PRK08017 67 VIALTDNRLYGIFNNAGFGV 86 (256)
T ss_pred HHHHHCCCEEEEEECCCCCC
T ss_conf 99984897489998896677
No 104
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.48 E-value=3e-06 Score=61.00 Aligned_cols=81 Identities=17% Similarity=0.288 Sum_probs=68.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|+++.- +++++||+.++++++++++.... .+.-..++|+.|.+++.++++..
T Consensus 12 KvalVTGas~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~l~~~g-----~~~~~~~~Dv~~~~~~~~~v~~~~ 83 (255)
T PRK06113 12 KCAIITGAGAGIGKEIAITFATAGA---SVVVSDINADAANHVVDEIQQLG-----GQAFACRCDITSEQELSALADFAV 83 (255)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9899958877899999999998799---99999698899999999999659-----908999836899999999999999
Q ss_pred ----CCCEEEECCCC
Q ss_conf ----97299973761
Q gi|254780742|r 81 ----NSQIIINVGSS 91 (419)
Q Consensus 81 ----~~dvVin~~~p 91 (419)
+.|++||.+|.
T Consensus 84 ~~~G~iDilVnNAG~ 98 (255)
T PRK06113 84 SKLGKVDILVNNAGG 98 (255)
T ss_pred HHHCCCCEEEECCCC
T ss_conf 981998899987887
No 105
>PRK10538 3-hydroxy acid dehydrogenase; Provisional
Probab=98.48 E-value=2.7e-06 Score=61.25 Aligned_cols=78 Identities=24% Similarity=0.367 Sum_probs=66.1
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC--
Q ss_conf 1999849-8779999999996089872599963999999999987343024555557308994378989999999753--
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT-- 80 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-- 80 (419)
.|||-|+ +++|+.+++.|+++.. ++++.+|+.+++++++++++ .++...++|+.|.+++.++++..
T Consensus 2 VvlVTGassGIG~a~A~~la~~Ga---~Vv~~~r~~~~l~~l~~~lg--------~~~~~~~~Dvsd~~~v~~~~~~~~~ 70 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQNGH---KVIATGRRQERLQELKDELG--------DNLYIAQLDVRNRAAIEEMLASLPA 70 (248)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHC--------CCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 999988866999999999998799---99999899999999999848--------8679999734888999999999999
Q ss_pred ---CCCEEEECCCCC
Q ss_conf ---972999737610
Q gi|254780742|r 81 ---NSQIIINVGSSF 92 (419)
Q Consensus 81 ---~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 71 ~~g~iDiLVnNAG~~ 85 (248)
T PRK10538 71 EWRNIDILVNNAGLA 85 (248)
T ss_pred HCCCCCEEEECCCCC
T ss_conf 709975999778546
No 106
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.47 E-value=3.3e-06 Score=60.65 Aligned_cols=81 Identities=14% Similarity=0.158 Sum_probs=66.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||-|| .|+|+.+++.|+++.. ++++.+|+.++++.+.+..+ .+.....+|+.|.+++.++++..
T Consensus 4 ~KvvlITGassGIG~aiA~~l~~~G~---~Vi~~~R~~~~l~~l~~~~~--------~~~~~~~~Dvtd~~~v~~~v~~~ 72 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH---RVVGTVRSAAARRDFEALHP--------GRALARVLDVTDFDAIDGVVADA 72 (277)
T ss_pred CCEEEECCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCC--------CCEEEEEEECCCHHHHHHHHHHH
T ss_conf 98899917873999999999998799---99999899999999998679--------95799998379999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|...
T Consensus 73 ~~~~G~iDvLVNNAG~~~ 90 (277)
T PRK06180 73 EATVGPIDVLVNNAGYGH 90 (277)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998199869998997788
No 107
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.47 E-value=3.1e-06 Score=60.91 Aligned_cols=93 Identities=20% Similarity=0.389 Sum_probs=66.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.|+|||+|+|-||+.++.+|.++.- .+|+|+.|+.+|+++++++++. .. .+-+.+.+.+. .
T Consensus 178 ~~~vLviGaGem~~l~~~~L~~~g~--~~i~v~nRt~~ra~~la~~~g~----------~~-----~~~~~l~~~l~--~ 238 (311)
T cd05213 178 GKKVLVIGAGEMGELAAKHLAAKGV--AEITIANRTYERAEELAKELGG----------NA-----VPLDELLELLN--E 238 (311)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--CEEEEECCCHHHHHHHHHHCCC----------EE-----ECHHHHHHHHH--H
T ss_conf 1679998687999999999996599--8259976867899999997498----------99-----72999999997--6
Q ss_pred CCEEEECCCCCCCHHHHHHHHHC----CCCEEEECC
Q ss_conf 72999737610032789999862----886896036
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDS----NVAYIDTAI 113 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~----g~hyvD~s~ 113 (419)
+|+||+|.+...-.-..+.+.+. ..=++|++-
T Consensus 239 ~DvvisaT~s~~~~~~~~~~~~~~~~~~~~iiDLav 274 (311)
T cd05213 239 ADVVISATGAPHYAKIVERAMKKRSGKPRLIVDLAV 274 (311)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECC
T ss_conf 899999279996203599997534799769999179
No 108
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.47 E-value=3.4e-06 Score=60.63 Aligned_cols=82 Identities=18% Similarity=0.221 Sum_probs=68.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++..- ++++.||+.++++++++.+.... .+....++|+.|.+++.+++++.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~g-----~~~~~~~~Dvs~~~~v~~~~~~~~ 79 (253)
T PRK06172 8 QVALVTGGAAGIGRATAIAFAREGA---KVVVADRDAAGGEETVALIREAG-----GEALFIACDVTRDAEVKALVEKTI 79 (253)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9899937576899999999998799---89999798899999999999649-----937999818999999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 80 ~~~G~iDiLVNNAGi~ 95 (253)
T PRK06172 80 AAYGRLDYAFNNAGIE 95 (253)
T ss_pred HHCCCCCEEEECCCCC
T ss_conf 9829999999898889
No 109
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.47 E-value=3.1e-06 Score=60.90 Aligned_cols=85 Identities=20% Similarity=0.264 Sum_probs=69.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|++||.|+ +++|+.+++.|+++.. ++++.+|+.++++++++++... .++.....|+.+.+++.+++...
T Consensus 5 gK~~lVTGas~GIG~aiA~~la~~Ga---~V~i~~r~~~~l~~~~~~l~~~------g~~~~~~~Dvs~~~~v~~~~~~~ 75 (238)
T PRK05786 5 GKNVLIVGVSPGLGYAVAYFALREGA---SVYAFARSEEKLKEIKKTLAKY------GNVIYVVGDVSKLEGAREAAEKA 75 (238)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHCC------CCEEEEECCCCCHHHHHHHHHHH
T ss_conf 98899928987899999999998799---9999969889999999987435------97799975789999999999999
Q ss_pred -----CCCEEEECCCCCCCH
Q ss_conf -----972999737610032
Q gi|254780742|r 81 -----NSQIIINVGSSFLNM 95 (419)
Q Consensus 81 -----~~dvVin~~~p~~~~ 95 (419)
+.|++||.+|.+...
T Consensus 76 ~~~~g~iD~lv~naG~~~~~ 95 (238)
T PRK05786 76 AKVFGALHGLVVTAGGYIED 95 (238)
T ss_pred HHHHCCCCEEEEECCCCCCC
T ss_conf 99839988799805756788
No 110
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=98.47 E-value=8e-07 Score=64.85 Aligned_cols=77 Identities=14% Similarity=0.097 Sum_probs=43.9
Q ss_pred EEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECC---CCHHHHHHHHHHCCCCEEEECCCCCC-----CHHHHHHHH
Q ss_conf 9996399999999998734302455555730899437---89899999997539729997376100-----327899998
Q gi|254780742|r 31 INIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDA---LNIKAVVELIKKTNSQIIINVGSSFL-----NMSVLRACI 102 (419)
Q Consensus 31 i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~---~d~~~l~~~~~~~~~dvVin~~~p~~-----~~~v~~a~i 102 (419)
+.|.+.+.+++..-+.+-.. ..+-+ -.++|. .+..+++.+++..+. -||.+-.+.. .....+.+.
T Consensus 4 ~~i~~~t~~e~~~~~~~a~~-----~aD~V-ElRvD~L~~~~~~~l~~L~~~~~~-PIit~rr~~~~~e~~~~e~l~~~~ 76 (477)
T PRK09310 4 ATISGPSFLEAKQQILRSLK-----LVDCI-ELRVDLLLSLSDQELKKLITLAPI-PILTWKKHKSCSEAAWIEKTQSLA 76 (477)
T ss_pred EEECCCCHHHHHHHHHHHHH-----CCCEE-EEEEHHCCCCCHHHHHHHHHCCCC-CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 98358899999999998760-----59889-998600257999999999964998-689996587688356999999999
Q ss_pred HCCCCEEEECCC
Q ss_conf 628868960366
Q gi|254780742|r 103 DSNVAYIDTAIH 114 (419)
Q Consensus 103 ~~g~hyvD~s~~ 114 (419)
+.|+.|||+--.
T Consensus 77 ~lg~~yvDlEl~ 88 (477)
T PRK09310 77 KLQPKYLDIDKD 88 (477)
T ss_pred HHCCCEEEEECC
T ss_conf 869989998656
No 111
>PRK07035 short chain dehydrogenase; Provisional
Probab=98.47 E-value=3.4e-06 Score=60.63 Aligned_cols=82 Identities=23% Similarity=0.381 Sum_probs=67.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|.+||.|+ +++|+.+++.|++..- ++++.+|+.++++++++++.... .+....++|+.|.+++.++++..
T Consensus 8 gKvalITGas~GIG~aia~~la~~Ga---~V~i~~r~~~~l~~~~~~i~~~g-----~~~~~~~~Dv~~~~~v~~~~~~~ 79 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGA---HVIVSSRKLDGCQAVADAIVAAG-----GKAEALACHIGEMEQIDALFAQI 79 (252)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHH
T ss_conf 99899958874999999999998799---89999798899999999999649-----95799982489999999999999
Q ss_pred -----CCCEEEECCCC
Q ss_conf -----97299973761
Q gi|254780742|r 81 -----NSQIIINVGSS 91 (419)
Q Consensus 81 -----~~dvVin~~~p 91 (419)
+.|++||.++.
T Consensus 80 ~~~~G~iDilVnnAg~ 95 (252)
T PRK07035 80 RERHGRLDILVNNAAA 95 (252)
T ss_pred HHHHCCCCEEEECCCC
T ss_conf 9982997789876855
No 112
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.47 E-value=4e-06 Score=60.10 Aligned_cols=85 Identities=15% Similarity=0.137 Sum_probs=69.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|.+||-|+ +++|+.++..|+++.- ++++.||+.+++++.++.+... ..+....++|+.|.+++.++++..
T Consensus 10 gK~alVTG~s~GIG~aiA~~la~~Ga---~Vii~~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dvt~~~~v~~~~~~~ 81 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAEAGA---TIVFNDIKQELVDKGLAAYREL-----GIEAHGYVCDVTDEDGIQAMVAQI 81 (265)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHC-----CCCEEEEEECCCCHHHHHHHHHHH
T ss_conf 99899958576899999999998699---9999959989999999999954-----991799993289999999999999
Q ss_pred -----CCCEEEECCCCCCC
Q ss_conf -----97299973761003
Q gi|254780742|r 81 -----NSQIIINVGSSFLN 94 (419)
Q Consensus 81 -----~~dvVin~~~p~~~ 94 (419)
+.|++||.+|-...
T Consensus 82 ~~~~g~iDiLVnNAG~~~~ 100 (265)
T PRK07097 82 EKEVGVIDILVNNAGIIRR 100 (265)
T ss_pred HHHCCCCCEEEECCCCCCC
T ss_conf 9982999899989989999
No 113
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.47 E-value=3.1e-06 Score=60.85 Aligned_cols=80 Identities=13% Similarity=0.226 Sum_probs=66.4
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++..- ++++.||+.++++++++++.. .+....++|+.|.+++.++++..
T Consensus 12 KvalVTGgs~GIG~aiA~~la~~Ga---~V~i~~r~~~~~~~~~~~~~~-------~~~~~~~~Dvt~~~~v~~~v~~~~ 81 (264)
T PRK12829 12 LRVLVTGGASGIGRAIAEAFAEAGA---RVHVCDVSEAALAATAARLPG-------AKVTATVADVADPAQVERVFDTAV 81 (264)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCCC-------CCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 9799947376899999999998799---899997998999999997479-------975999962899999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-+
T Consensus 82 ~~~G~iDiLVNNAGi~ 97 (264)
T PRK12829 82 ERFGGLDVLVNNAGIA 97 (264)
T ss_pred HHCCCCCEEEECCCCC
T ss_conf 9739998999899899
No 114
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.46 E-value=3.7e-06 Score=60.34 Aligned_cols=81 Identities=20% Similarity=0.330 Sum_probs=66.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|+++.- ++++.||+.+++++..+++.. .+....++|+.|.+++.++++..
T Consensus 8 KvalITGas~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~-------~~~~~~~~Dvt~~~~~~~~v~~~~ 77 (239)
T PRK12828 8 KVVAITGGFGGLGRATAAWLAARGA---RVALIGRGAAPLSQTLPGVPA-------DALRIGGIDLVDPQAARRAVDEVN 77 (239)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHC-------CCCEEEEECCCCHHHHHHHHHHHH
T ss_conf 9899947254899999999998799---899997987789999987517-------885699960799999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|...
T Consensus 78 ~~~G~iDilVnNAG~~~ 94 (239)
T PRK12828 78 RQFGRLDALVNIAGAFV 94 (239)
T ss_pred HHCCCCCEEEECCCCCC
T ss_conf 98399979998977899
No 115
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.45 E-value=3.2e-06 Score=60.82 Aligned_cols=80 Identities=15% Similarity=0.236 Sum_probs=64.0
Q ss_pred CC-CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 97-31999849-87799999999960898725999639999999999873430245555573089943789899999997
Q gi|254780742|r 1 MK-KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 1 M~-k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
|. |.+||.|+ +++|+.+++.|++.. .+++++|+.++++++.+++. .....+|+.|.+++.+.++
T Consensus 1 m~mKvalITGas~GIG~aia~~la~~g----~vv~~~r~~~~l~~l~~~~~----------~~~~~~Dlt~~~~i~~~~~ 66 (226)
T PRK08219 1 MGMPTALITGASRGIGAAIARALARTH----TLLLAGRPSERLDAVAARLG----------ATTWPADLTDPEAIAAAVE 66 (226)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHCC----CEEEEECCHHHHHHHHHHHC----------CCEEEECCCCHHHHHHHHH
T ss_conf 978999992846499999999999699----89999898899999999709----------9378605799999999999
Q ss_pred HC-CCCEEEECCCCCCC
Q ss_conf 53-97299973761003
Q gi|254780742|r 79 KT-NSQIIINVGSSFLN 94 (419)
Q Consensus 79 ~~-~~dvVin~~~p~~~ 94 (419)
+. +.|++||++|-...
T Consensus 67 ~~~~iD~lVnnAG~~~~ 83 (226)
T PRK08219 67 PLDRLDVLVHNAGVAEL 83 (226)
T ss_pred HCCCCCEEEECCCCCCC
T ss_conf 65998899989968999
No 116
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.45 E-value=3e-06 Score=60.97 Aligned_cols=81 Identities=16% Similarity=0.258 Sum_probs=67.4
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||-|+ +++|+.+++.|++... ++.+.||+.++++++++++. .+....++|+.|.+++..+++..
T Consensus 6 gK~alITG~s~GIG~aia~~~a~~Ga---~V~i~~~~~~~~~~~~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~ 74 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGA---IVGLHGTRVEKLEALAAELG--------ERVKIFPANLSDRDEVKALGQKA 74 (245)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHC--------CCEEEEECCCCCHHHHHHHHHHH
T ss_conf 99899927476899999999998699---99998299999999999838--------96699991379999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 75 ~~~~g~iDiLINnAG~~~ 92 (245)
T PRK12936 75 EADLEGVDILVNNAGITK 92 (245)
T ss_pred HHHCCCCCEEEECCCCCC
T ss_conf 997599969998998899
No 117
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.45 E-value=3.3e-06 Score=60.65 Aligned_cols=80 Identities=13% Similarity=0.206 Sum_probs=67.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|+++.- ++++.||+.+++++++++++. +....+.|+.|.+++.++++..
T Consensus 7 KvalVTGgs~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~--------~~~~~~~Dv~~~~~i~~~~~~~~ 75 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGA---CVAILDIDADNGAAVAASLGE--------RARFIATDITDDAAIERAVATAV 75 (261)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHCC--------CEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9899948776899999999998799---899997988999999998199--------72899813899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.++.+.
T Consensus 76 ~~fG~iDiLVNNAg~~~ 92 (261)
T PRK08265 76 ARFGGLDILVNLACTYV 92 (261)
T ss_pred HHHCCCCEEEECCCCCC
T ss_conf 98199878998575578
No 118
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.45 E-value=4.3e-06 Score=59.94 Aligned_cols=79 Identities=16% Similarity=0.160 Sum_probs=66.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||.|+ +++|+.++..|+++.. ++++.|||.+++++..+++. .+....+.|+.|.+++.++++..
T Consensus 7 K~~lITGas~GIG~aiA~~la~~Ga---~V~i~~r~~~~l~~~~~~l~--------~~~~~~~~Dv~~~~~~~~~~~~~~ 75 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFAAEGA---RVAITGRDAATLEAARAELG--------EDALVIRNDAGSVAAQRALAQALA 75 (249)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHC--------CCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 8899937687899999999998799---99999699899999999858--------975999951799999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|..
T Consensus 76 ~~~g~iDiLvnnAG~~ 91 (249)
T PRK06500 76 EAGGRLDAVFINAGVA 91 (249)
T ss_pred HHCCCCCEEEECCCCC
T ss_conf 9769998999899878
No 119
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.45 E-value=3.1e-06 Score=60.86 Aligned_cols=84 Identities=23% Similarity=0.330 Sum_probs=69.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ .|+|..+++.|+++.. ++++++||.+|+++.++++....+ ..+++..++|..|.++++++.+..
T Consensus 15 K~~vITGa~sGIG~~~a~~La~~Ga---~Vil~~R~~~k~~~a~~~i~~~~~---~~~v~~~~lDLs~l~sVr~~a~~~~ 88 (314)
T PRK05854 15 KLAVVTGASSGLGFGLARRLAAAGA---DVILPVRNRAKGEAAVAAIRTAVP---DAKLTIRALDLSSLASVAALGEQLL 88 (314)
T ss_pred CEEEECCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHCC---CCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9899906882999999999997849---899997999999999999998689---9856999646316899999999875
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||-+|-.
T Consensus 89 ~~~~~lDiLInNAGv~ 104 (314)
T PRK05854 89 AEGRPIHLLINNAGVM 104 (314)
T ss_pred HCCCCCCEEEECCCCC
T ss_conf 3068752787267666
No 120
>PRK06182 short chain dehydrogenase; Validated
Probab=98.44 E-value=5.3e-06 Score=59.26 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=62.6
Q ss_pred CCC-EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 973-1999849-87799999999960898725999639999999999873430245555573089943789899999997
Q gi|254780742|r 1 MKK-NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 1 M~k-~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
|++ .+||-|| +|+|+.++..|+++.. ++.+.+|+.++++.+.+ .++....+|+.|.+++.+++.
T Consensus 1 mk~Kv~lITGassGIG~a~a~~la~~G~---~V~~~~r~~~~l~~l~~-----------~~~~~~~~Dvt~~~~v~~~~~ 66 (273)
T PRK06182 1 MKKKVALVTGASSGIGKATARKLIAEGF---TVYGAARRVDKMEDLAS-----------LGIHPLALDVTDEASMKAAVA 66 (273)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHH-----------CCCEEEEEECCCHHHHHHHHH
T ss_conf 9469899906320999999999998799---89999798999999996-----------799799985899999999999
Q ss_pred HC-----CCCEEEECCCCCC
Q ss_conf 53-----9729997376100
Q gi|254780742|r 79 KT-----NSQIIINVGSSFL 93 (419)
Q Consensus 79 ~~-----~~dvVin~~~p~~ 93 (419)
.. +.|++||.+|-..
T Consensus 67 ~i~~~~g~iDiLVNNAG~~~ 86 (273)
T PRK06182 67 TILAEEGRIDVLVNNAGYGS 86 (273)
T ss_pred HHHHHHCCCCEEEECCCCCC
T ss_conf 99998399887750586777
No 121
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=98.44 E-value=4.2e-06 Score=59.98 Aligned_cols=103 Identities=18% Similarity=0.320 Sum_probs=75.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHH-------------------HHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 73199984987799999999960898725999639999-------------------99999987343024555557308
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQ-------------------KCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
+.+|+|+|+|+.|++++.||++.. + .+|++.|.|.= |++..++.+.+.+ +.+++
T Consensus 41 ~a~VlvvG~GGLG~p~~~yLaaaG-v-G~i~ivD~D~Ve~sNL~RQil~~~~diG~~K~~~A~~~l~~lN-----p~i~i 113 (370)
T PRK05600 41 NARVLVIGAGGLGCPAMQSLASAG-V-GTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQ-----PDIRV 113 (370)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCCCCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHC-----CCCCE
T ss_conf 197899888757899999999828-9-7489873898260210555426976669757999999999878-----99715
Q ss_pred EEECC-CCHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECC
Q ss_conf 99437-8989999999753972999737610-032789999862886896036
Q gi|254780742|r 63 HQVDA-LNIKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 63 ~~~D~-~d~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~ 113 (419)
..... .+.+...+++++ .|+||+|.--| ..+.+-++|+..++++|--+.
T Consensus 114 ~~~~~~l~~~n~~~li~~--~DvVvD~tDNf~tRylindaC~~~~~PlV~ga~ 164 (370)
T PRK05600 114 NALRERLTAENAVELLNG--VDLVLDGSDSFATKFLVADAAEITGTPLVWGTV 164 (370)
T ss_pred EEHHHHCCHHHHHHHHHC--CCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 735664699999987636--878997788879999999999984997698453
No 122
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.43 E-value=3.8e-06 Score=60.28 Aligned_cols=76 Identities=17% Similarity=0.206 Sum_probs=63.8
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|+++.- ++++.||+.++++++++++. ....++|+.|.+++.++++..
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga---~Vvi~d~~~~~~~~~~~~~~----------~~~~~~Dv~~~~~v~~~v~~~~ 74 (255)
T PRK06057 8 RVAVITGGASGIGLATARRMRAEGA---TVVVGDIDPEAGKAAADELG----------GLFVQVDVTDEDAVNALFDTAA 74 (255)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCC----------CEEEEEECCCHHHHHHHHHHHH
T ss_conf 9899968488899999999998699---89999698899999998649----------9799981699999999999999
Q ss_pred ----CCCEEEECCCC
Q ss_conf ----97299973761
Q gi|254780742|r 81 ----NSQIIINVGSS 91 (419)
Q Consensus 81 ----~~dvVin~~~p 91 (419)
+.|++||.+|-
T Consensus 75 ~~~G~iDiLVNnAGi 89 (255)
T PRK06057 75 ETYGSVDIAFNNAGI 89 (255)
T ss_pred HHHCCCCEEEECCCC
T ss_conf 981998789988855
No 123
>TIGR01921 DAP-DH diaminopimelate dehydrogenase; InterPro: IPR010190 This entry represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine biosynthesis in Corynebacterium, Bacterioides, Porphyromonas and other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterised ..
Probab=98.43 E-value=3.9e-07 Score=66.95 Aligned_cols=148 Identities=13% Similarity=0.191 Sum_probs=93.5
Q ss_pred CCC-EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 973-1999849877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKK-NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k-~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|+| ++-|+|+|..|+.+-..|.+++|- .-+.|-.|.-..-..++.+++ .. .|.+.+ +...
T Consensus 1 M~kiRaaIVGYGNlG~~V~~ai~~~PDm-Elvgv~~Rrd~~t~~va~~~~------------vy--~V~~~~---K~~~- 61 (326)
T TIGR01921 1 MSKIRAAIVGYGNLGKSVEEAIQQAPDM-ELVGVFRRRDAETLDVAEELA------------VY--AVVEDE---KELE- 61 (326)
T ss_pred CCEEEEEEECCCCHHHHHHHHHHCCCCC-EEEEEEEECCCCCCCHHHCCC------------HH--HHHHHH---HCCC-
T ss_conf 9705788862232007999998408980-489988707887576112252------------02--222223---2028-
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
Q ss_conf 39729997376100327899998628868960366420000144200003577510888851886995375011148899
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAF 159 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ll 159 (419)
..||.|-|.|--...+=.+--+..+.+-||.=+. ..-+.+....+|+.|+++|..-|++.|||||+..+
T Consensus 62 -dvdv~iLC~gsatd~pe~~p~fA~~~nTvDsfD~---------H~~Ip~~r~~~DaaA~~~g~VSvis~GWDPG~fSi- 130 (326)
T TIGR01921 62 -DVDVLILCTGSATDLPEQKPYFAAFINTVDSFDI---------HTDIPDLRRTLDAAAKEAGAVSVISAGWDPGLFSI- 130 (326)
T ss_pred -CEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCC---------CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH-
T ss_conf -8259997388645554345100122101236502---------24207899999999986198789983478872679-
Q ss_pred HHHHHHHHCCCCCEEEEEEC
Q ss_conf 99999974366638976302
Q gi|254780742|r 160 ARLAQDEYFDKITDIDIIDV 179 (419)
Q Consensus 160 a~~~~~~~~d~~~~i~~~~~ 179 (419)
.|-+.+-+.. .+.-+-+++
T Consensus 131 ~Rv~geA~lp-~g~tyTfwG 149 (326)
T TIGR01921 131 NRVLGEAILP-KGITYTFWG 149 (326)
T ss_pred HHHHHHHHHC-CCCEEEEEC
T ss_conf 9999997501-686133237
No 124
>PRK06720 hypothetical protein; Provisional
Probab=98.43 E-value=4e-06 Score=60.10 Aligned_cols=81 Identities=12% Similarity=0.137 Sum_probs=67.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.++|-|+ +++|+.+++.|++..- ++++.|||.++++++++++.... .+.....+|+.+.++..++++..
T Consensus 17 KvalITGa~~GIG~a~A~~la~~Ga---~Vvi~d~~~~~~~~~~~~i~~~g-----~~a~~~~~Dvs~~~~v~~~i~~~~ 88 (169)
T PRK06720 17 KVAIVTGGGIGIGRNTALLLAKQGA---KVIVTDIDQESGQATVEEITNLG-----GEALFVSYDMEKQGDWQRVISITL 88 (169)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9999989754899999999998699---89995276365999999999749-----953789758899999999999999
Q ss_pred ----CCCEEEECCCC
Q ss_conf ----97299973761
Q gi|254780742|r 81 ----NSQIIINVGSS 91 (419)
Q Consensus 81 ----~~dvVin~~~p 91 (419)
+.|++||.+|-
T Consensus 89 ~~~g~iDiLvNNAGI 103 (169)
T PRK06720 89 NAFSRIDMLFQNAGL 103 (169)
T ss_pred HHCCCCCEEEECCCC
T ss_conf 975989989989421
No 125
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=98.43 E-value=5.2e-06 Score=59.34 Aligned_cols=104 Identities=16% Similarity=0.237 Sum_probs=75.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-------------------HHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 7319998498779999999996089872599963999-------------------999999987343024555557308
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-------------------QKCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
..+|+|+|+|+.|++++.||++.. + .+|+++|.|. .|++..++.+...++. .+++.
T Consensus 28 ~s~VlvvG~GGLG~~~~~yLa~aG-v-G~i~i~D~D~ve~sNL~RQ~l~~~~~iG~~K~~~a~~~l~~~np~---i~i~~ 102 (355)
T PRK05597 28 DAKVSVIGAGGLGSPALLYLAGAG-V-GHITIIDDDVVDLSNLHRQVIHTTAGVGTPKAESAREAMLALNPD---VKVTV 102 (355)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC---CCEEE
T ss_conf 296899877766899999999849-9-759997299926121337756541217979799999999987899---74275
Q ss_pred EEECCCCHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECC
Q ss_conf 994378989999999753972999737610-032789999862886896036
Q gi|254780742|r 63 HQVDALNIKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 63 ~~~D~~d~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~ 113 (419)
..-. .+.+...+++++ .|+||+|.--| ..+.+-++|+..++++|--+.
T Consensus 103 ~~~~-l~~~na~~li~~--~DvVvD~tDn~~tR~lind~c~~~~~PlV~ga~ 151 (355)
T PRK05597 103 SVRR-LDWSNALSELAD--ADVILDGSDNFDTRHVASWAAARLGIPHVWASI 151 (355)
T ss_pred EHHH-CCHHHHHHHHHC--CCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 3321-577789977528--878987678888999999999986998799652
No 126
>PRK09242 tropinone reductase; Provisional
Probab=98.42 E-value=4.9e-06 Score=59.53 Aligned_cols=86 Identities=16% Similarity=0.213 Sum_probs=68.4
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|++||-|+ +++|+.+++.|+++.. ++++.+||.+++++..+++..... ..++...++|+.|.+++.+++...
T Consensus 10 gK~alITGgs~GIG~a~a~~la~~Ga---~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~ 83 (258)
T PRK09242 10 GQTALITGASKGIGLAIARELLGLGA---DVLIVARDADALAQARDELAEEFP---ERELHGLAADVSDDEDRRAILDWV 83 (258)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHCC---CCEEEEEEEECCCHHHHHHHHHHH
T ss_conf 99999948486899999999998799---899996988999999999986447---972999993079999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|...
T Consensus 84 ~~~~g~iDiLVnnAG~~~ 101 (258)
T PRK09242 84 EDHWDGLHILVNNAGGNI 101 (258)
T ss_pred HHHCCCCCEEEECCCCCC
T ss_conf 997499979998998899
No 127
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=98.42 E-value=4.6e-06 Score=59.73 Aligned_cols=104 Identities=25% Similarity=0.361 Sum_probs=76.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-------------------HHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 7319998498779999999996089872599963999-------------------999999987343024555557308
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-------------------QKCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
..+|+|+|||+.|+.++.||++.. + .+|+++|.|. .|++..++.+...++. .+++.
T Consensus 42 ~a~VlvvG~GGLG~~~~~yLaaaG-v-G~i~ivD~D~v~~sNL~RQil~~~~dvG~~K~~~a~~~l~~~Np~---v~v~~ 116 (392)
T PRK07878 42 NARVLVIGAGGLGSPTLLYLAAAG-V-GTIGIVEFDVVDESNLQRQIIHGQSDVGRSKAQSARDSIVEINPL---VNVRL 116 (392)
T ss_pred HCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEECCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCC---CCCEE
T ss_conf 197899878757899999999828-9-759998789967455772005684335870799999999987898---53121
Q ss_pred EEECCCCHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECC
Q ss_conf 994378989999999753972999737610-032789999862886896036
Q gi|254780742|r 63 HQVDALNIKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 63 ~~~D~~d~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~ 113 (419)
.... .+++...+++++ .|+||+|.--| ..+.+-++|++.++++|--+.
T Consensus 117 ~~~~-l~~~n~~~li~~--~DvViD~tDN~~tR~lindac~~~~~PlV~ga~ 165 (392)
T PRK07878 117 HEFR-LEPSNAVDLFAQ--YDLILDGTDNFATRYLVNDAAVLAGKPYVWGSI 165 (392)
T ss_pred HHHC-CCHHHHHHHHCC--CCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 1313-788898764317--768986689989999999999996998799760
No 128
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=98.42 E-value=3.1e-06 Score=60.88 Aligned_cols=121 Identities=21% Similarity=0.237 Sum_probs=85.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.++++|+|+|+.+++++..|.+.. . .+++|..|+.++++++++.+.... .+ +. ....
T Consensus 122 ~~~~lilGaGGaarai~~aL~~~G-~-~~i~I~nR~~~~a~~L~~~~~~~~----~~-------~~----------~~~~ 178 (272)
T PRK12550 122 DAVVALRGSGGMAKAVAAALRDAG-F-TDGTIVARNEKTGKALAELYGYEW----RP-------DL----------GGIE 178 (272)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHCCCCC----CC-------CC----------CCCC
T ss_conf 773899736233899999999769-9-879999899899999998739733----46-------43----------3466
Q ss_pred CCEEEECCCCCCC-------HHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHH
Q ss_conf 7299973761003-------278999986288689603664200001442000035775108888518869953750111
Q gi|254780742|r 82 SQIIINVGSSFLN-------MSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPG 154 (419)
Q Consensus 82 ~dvVin~~~p~~~-------~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PG 154 (419)
+|+||||.+--+. .++-...+..+.=.+|+.|..... .|-..|+++|..++.|.
T Consensus 179 ~dliINaTpvGm~~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T--------------~ll~~A~~~G~~~i~Gl----- 239 (272)
T PRK12550 179 ADLLVNVTPIGMAGGPEADKLAFSEAEIDAASVVFDVVALPAET--------------PLIRYARARGKTVITGA----- 239 (272)
T ss_pred CCEEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCC--------------HHHHHHHHCCCCEECCH-----
T ss_conf 89799667665578975345889978858887899974389878--------------99999998849362769-----
Q ss_pred HHHHHHHHHHHH
Q ss_conf 488999999997
Q gi|254780742|r 155 VVNAFARLAQDE 166 (419)
Q Consensus 155 l~~lla~~~~~~ 166 (419)
.|+..+++.+
T Consensus 240 --~MLi~Qa~~q 249 (272)
T PRK12550 240 --EVIALQAVEQ 249 (272)
T ss_pred --HHHHHHHHHH
T ss_conf --9999999999
No 129
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.42 E-value=6.5e-06 Score=58.68 Aligned_cols=83 Identities=16% Similarity=0.154 Sum_probs=67.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||.|+ +++|+.+++.|+++.- ++++.+|+.+++++.++++..... .++...+.|+.+.+++.++++..
T Consensus 9 K~alITG~s~GIG~aiA~~la~~Ga---~V~i~~r~~~~l~~~~~~l~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~ 81 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGA---DVIILSRNEENLKRAKEKIKSESD----VEVHYIVADLTKREDLERTVKELK 81 (263)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHCC----CCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9899916260999999999998699---999997988999999999985049----857999848999999999999999
Q ss_pred ---CCCEEEECCCCC
Q ss_conf ---972999737610
Q gi|254780742|r 81 ---NSQIIINVGSSF 92 (419)
Q Consensus 81 ---~~dvVin~~~p~ 92 (419)
+.|++||.++..
T Consensus 82 ~~g~~dilv~nag~~ 96 (263)
T PRK08339 82 NIGDPDIFFFSTGGP 96 (263)
T ss_pred HHCCCCEEEECCCCC
T ss_conf 569998999899999
No 130
>PRK06196 oxidoreductase; Provisional
Probab=98.41 E-value=4.4e-06 Score=59.85 Aligned_cols=78 Identities=15% Similarity=0.293 Sum_probs=66.4
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ .|+|..+++.|+++.. ++++++||.+|+++.++++. +++...+|..|.++++++.++.
T Consensus 27 K~~vITGa~sGIG~~tA~~La~~Ga---~Vil~~R~~~k~~~a~~~i~---------~~~~~~lDLs~~~sVr~~a~~~~ 94 (316)
T PRK06196 27 KTAIVTGGYSGLGLETTRALAQAGA---HVVVPARRPDAAREALAGID---------GVEVVALDLADLASVRAFAERFL 94 (316)
T ss_pred CEEEECCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHC---------CCCEEECCCCCHHHHHHHHHHHH
T ss_conf 9899917996799999999997899---89999499999999998741---------78579836889999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 95 ~~~~~lDvLInNAGi~ 110 (316)
T PRK06196 95 DSGRRIDILINNAGVM 110 (316)
T ss_pred HHCCCCEEEEECCCCC
T ss_conf 7579832999578767
No 131
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.40 E-value=6.1e-06 Score=58.90 Aligned_cols=83 Identities=17% Similarity=0.262 Sum_probs=68.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||.|+ +++|+.+++.|+++.. ++++.||+.+++++.++++.. ..++....+|+.|.+++.++++++
T Consensus 7 gK~~lITGgs~GIG~aia~~la~~Ga---~V~i~~r~~~~l~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (240)
T PRK07041 7 DQKVLVVGGSSGIGLAAARAFAARGA---DVTIASRSRERLAAAARALGG------PRPVRTAALDITDEAAVDAFFAEA 77 (240)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHCC------CCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 99899957788899999999998799---999995988999999998478------886699984799999999999970
Q ss_pred C-CCEEEECCCCCC
Q ss_conf 9-729997376100
Q gi|254780742|r 81 N-SQIIINVGSSFL 93 (419)
Q Consensus 81 ~-~dvVin~~~p~~ 93 (419)
+ .|++||.++-..
T Consensus 78 g~~d~lv~nag~~~ 91 (240)
T PRK07041 78 GPFDHVVITAADTA 91 (240)
T ss_pred CCCCEEEECCCCCC
T ss_conf 98788998234479
No 132
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.40 E-value=5.1e-06 Score=59.38 Aligned_cols=82 Identities=9% Similarity=0.164 Sum_probs=67.7
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.++|-|+ +++|..+++.|+++.- +++++|||.+++++.++++.... ..+....+|+.|.+++.++++..
T Consensus 7 KvavITGaasGIG~a~A~~la~~Ga---~Vvi~d~~~~~l~~~~~~l~~~g-----~~~~~~~~Dvt~~~~v~~l~~~~~ 78 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRGA---RVVLGDVDKPGLRQAVNHLRAEG-----FDVHGVMCDVRHREEVTHLADEAF 78 (275)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 8799928266999999999998799---89999798899999999998269-----847999788899999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 79 ~~~G~iDilvnNAGi~ 94 (275)
T PRK05876 79 RLLGHVDVVFSNAGIV 94 (275)
T ss_pred HHHCCCCEEECCCCCC
T ss_conf 9848988512157446
No 133
>PRK05717 oxidoreductase; Validated
Probab=98.40 E-value=6.2e-06 Score=58.85 Aligned_cols=79 Identities=11% Similarity=0.120 Sum_probs=65.4
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|..+++.|++..- +++++|||.++++++++++.. +......|+.|.+++.+++++.
T Consensus 11 KvalITG~s~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~--------~~~~~~~Dvt~~~~v~~~i~~~~ 79 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGW---QVVLADLDRERGAKVAKALGE--------NAWFIAMDVADEAQVAAGVAEVL 79 (255)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHCC--------CEEEEEEECCCHHHHHHHHHHHH
T ss_conf 8899958788899999999998799---899996988999999998489--------75899930799999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.++..
T Consensus 80 ~~~G~id~lvnNAg~~ 95 (255)
T PRK05717 80 GQFGRLDALVCNAAIA 95 (255)
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9829998999877305
No 134
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.39 E-value=8.4e-06 Score=57.95 Aligned_cols=86 Identities=16% Similarity=0.206 Sum_probs=66.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.|||-|| +|+|+.++..|++.. .++.+.+|+.++++++.+ .++...++|+.|.+++.++++..
T Consensus 2 KvvlITGassGIG~alA~~la~~G---~~V~~~~R~~~~l~~l~~-----------~~~~~~~~Dvtd~~~i~~~~~~~~ 67 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAG---YEVWATARKAEDVEALAA-----------AGFTAVQLDVNDGAALARLAEELE 67 (274)
T ss_pred CEEEECCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHH-----------CCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 989994888589999999999879---999999799999999984-----------899189984699899999999999
Q ss_pred ----CCCEEEECCCCCCCHHHHHHHH
Q ss_conf ----9729997376100327899998
Q gi|254780742|r 81 ----NSQIIINVGSSFLNMSVLRACI 102 (419)
Q Consensus 81 ----~~dvVin~~~p~~~~~v~~a~i 102 (419)
+.|++||.+|.....++.+.-.
T Consensus 68 ~~~g~iDiLVNNAG~~~~g~~~~~~~ 93 (274)
T PRK05693 68 AEHQGLDVLINNAGYGAMGPLLDGGV 93 (274)
T ss_pred HHCCCCCEEEECCCCCCCCCHHHHHH
T ss_conf 97299768998886778875898768
No 135
>PRK06483 short chain dehydrogenase; Provisional
Probab=98.39 E-value=6.5e-06 Score=58.70 Aligned_cols=80 Identities=20% Similarity=0.281 Sum_probs=62.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.|.|||.|+ +++|+.+++.|+++.. ++++.+|+.+.. ++++.. .+....++|+.|.+++.++++.
T Consensus 1 M~ktVlVTGas~GIG~aiA~~la~~Ga---~Vvi~~r~~~~~---~~~l~~-------~~~~~~~~Dv~~~~~v~~~~~~ 67 (236)
T PRK06483 1 MSAPILITGAGQRIGLALAKHLLAQGQ---PVIVSYRSHYPA---IDELRQ-------AGATCIQADFSTNAGIMAFIDE 67 (236)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHH---HHHHHH-------CCCEEEEECCCCHHHHHHHHHH
T ss_conf 998799978998899999999998899---899995984799---999985-------6998999227999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||.++.+.
T Consensus 68 ~~~~~g~id~lVnNAg~~~ 86 (236)
T PRK06483 68 LKQHTDGLRAIIHNASDWL 86 (236)
T ss_pred HHHHHCCCCEEEECCCCCC
T ss_conf 9998399759997774467
No 136
>PRK06197 short chain dehydrogenase; Provisional
Probab=98.39 E-value=5.1e-06 Score=59.41 Aligned_cols=86 Identities=16% Similarity=0.253 Sum_probs=71.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|.|||-|+ .|+|..+++.|+++.. ++++++||.+|+++.++++....+ ..++++..+|..|.++++++.+..
T Consensus 16 GK~~lITGa~sGIG~~~A~~La~~ga---~Vil~~R~~~k~~~a~~~i~~~~~---~~~i~~~~lDLssl~sV~~~a~~~ 89 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAKGA---HVVLAVRNLDKGNAAAARITAAHP---GADVTLQELDLASLASVRAAADAL 89 (306)
T ss_pred CCEEEECCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHCC---CCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 99999916895999999999997849---899997989999999999997689---985799976643077899999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||-+|-..
T Consensus 90 ~~~~~~lDvLinNAGi~~ 107 (306)
T PRK06197 90 RAAYPRIDLLINNAGVMY 107 (306)
T ss_pred HHCCCCCCEEEECCCCCC
T ss_conf 961898768997784456
No 137
>PRK06227 consensus
Probab=98.39 E-value=7.9e-06 Score=58.14 Aligned_cols=83 Identities=19% Similarity=0.261 Sum_probs=67.7
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++..- +++++||+.+.++...+.+.... .+....+.|+.|.+++.+++.+.
T Consensus 6 KvalVTGas~GIG~aiA~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~g-----~~~~~~~~Dvs~~~~v~~~~~~~~ 77 (256)
T PRK06227 6 KVAIVTGGGQGIGAAIAQTFAENGA---KVVIADIDEEAGLEREEMLRSNG-----LDALFVKTDVSDEEDVKNMVRKTV 77 (256)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 8899958668899999999998799---99999698889999999999559-----918999816899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 78 ~~~G~iDiLVNNAGi~~ 94 (256)
T PRK06227 78 ERYGGIDILINNAGIFS 94 (256)
T ss_pred HHCCCCCEEEECCCCCC
T ss_conf 98299979998998999
No 138
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.39 E-value=7.6e-06 Score=58.25 Aligned_cols=83 Identities=14% Similarity=0.228 Sum_probs=67.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||-|+ +++|+.+++.|++... ++++.||+.++++++++++.. .++....+|+.|.+++..+++..
T Consensus 2 nKvalITGgs~GIG~aia~~la~~Ga---~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~Dv~~~~~~~~~~~~i 71 (256)
T PRK07074 2 SRTALVTGAAGGIGQALARRFLAAGD---RVLALDIDRAALAAFVDALGD-------AAVAPVICDLTDAASVERLAAAL 71 (256)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHCC-------CCEEEEEEECCCHHHHHHHHHHH
T ss_conf 98899988468999999999998699---999997988999999998269-------97799997279999999999999
Q ss_pred ----CCCEEEECCCCCCC
Q ss_conf ----97299973761003
Q gi|254780742|r 81 ----NSQIIINVGSSFLN 94 (419)
Q Consensus 81 ----~~dvVin~~~p~~~ 94 (419)
+.|++||.+|....
T Consensus 72 ~~~g~iDiLVNNAG~~~~ 89 (256)
T PRK07074 72 ANEGPVDVLVANAGAARA 89 (256)
T ss_pred HHHCCCCEEEECCCCCCC
T ss_conf 985998799988877899
No 139
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=98.39 E-value=1.3e-05 Score=56.70 Aligned_cols=103 Identities=18% Similarity=0.348 Sum_probs=73.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECC------------------HHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 731999849877999999999608987259996399------------------99999999873430245555573089
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRT------------------LQKCSKIIDSIYKKKSLKIDGKLAIH 63 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~------------------~~~~~~~~~~l~~~~~~~~~~~~~~~ 63 (419)
+.+|+|+|+|+.|+.++.||++.. + .+|+++|.| ..|++..++.+...++ .-++++.
T Consensus 27 ~s~VlivG~GGLG~~~a~~La~aG-V-G~i~lvD~D~Ve~SNL~RQ~~~~~diG~~Ka~~a~~~l~~iNp---~v~I~~~ 101 (209)
T PRK08644 27 KAKVGIAGAGGLGSNIAVALARSG-V-GNLKLVDFDVVEPSNLNRQQYFISQIGMFKVEALKENLLRINP---FVKIEVH 101 (209)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHC-C-CEEEEEECCEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCC---CEEEEEE
T ss_conf 296899888788999999999938-9-8189988999015411037567877597569999999874489---8289997
Q ss_pred EECCCCHHHHHHHHHHCCCCEEEECCCCCC-CHHHHHHHHH-CCCCEEEEC
Q ss_conf 943789899999997539729997376100-3278999986-288689603
Q gi|254780742|r 64 QVDALNIKAVVELIKKTNSQIIINVGSSFL-NMSVLRACID-SNVAYIDTA 112 (419)
Q Consensus 64 ~~D~~d~~~l~~~~~~~~~dvVin~~~p~~-~~~v~~a~i~-~g~hyvD~s 112 (419)
.-. -+.+.+.+++++ +|+||.|.--|. ...+..+|.. .++++|-.+
T Consensus 102 ~~~-l~~~n~~~l~~~--~DiViDctDN~~tR~li~~~c~~~~~~plV~as 149 (209)
T PRK08644 102 QVK-IDEDNIEELFKD--CDIVVEAFDNAETKAMLVETVLEKKGKKVVSAS 149 (209)
T ss_pred ECC-CCHHHHHHHHHC--CCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 224-898999999857--999999999999999999999997799689996
No 140
>PRK07707 consensus
Probab=98.38 E-value=5.9e-06 Score=58.97 Aligned_cols=83 Identities=18% Similarity=0.260 Sum_probs=67.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 9731999849-87799999999960898725999-639999999999873430245555573089943789899999997
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINI-ASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~v-a~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
|+|.+||-|+ +++|+.+++.|+++.- ++++ .+++.++++++++++.... ....+.|+.+.++..++++
T Consensus 1 M~KvalVTG~s~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~~-------~~~v~~Dl~~~~~~~~~~~ 70 (239)
T PRK07707 1 MKKYALVTGASGGIGQAISKQLAQDGY---TVYLHYNNNEEKVNELQEELGEVI-------PVPVQADLASPDGAEKLWS 70 (239)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHCCCC-------EEEEEEECCCHHHHHHHHH
T ss_conf 998999966887899999999998799---899983999899999999844366-------0699986899999999999
Q ss_pred HCC--CCEEEECCCCCC
Q ss_conf 539--729997376100
Q gi|254780742|r 79 KTN--SQIIINVGSSFL 93 (419)
Q Consensus 79 ~~~--~dvVin~~~p~~ 93 (419)
+.. .|++||.+|...
T Consensus 71 ~~~~~iD~lVnnAG~~~ 87 (239)
T PRK07707 71 QIEHPLDAIVYNSGKSI 87 (239)
T ss_pred HHCCCCCEEEECCCCCC
T ss_conf 85788999998999999
No 141
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=98.38 E-value=1.2e-05 Score=56.89 Aligned_cols=103 Identities=15% Similarity=0.261 Sum_probs=75.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-------------------HHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 7319998498779999999996089872599963999-------------------999999987343024555557308
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-------------------QKCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
+.+|+|+|+|++|..++.+|+... + .++++.|.|. .|++..++.+...++. .+++.
T Consensus 21 ~s~VlvvG~GGLG~~v~~~La~aG-v-g~i~ivD~d~v~~snL~RQ~l~~~~diG~~Ka~~a~~~l~~lNp~---v~i~~ 95 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSG-I-GSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPR---VKVSV 95 (197)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHC-C-CEEEEEECCCCCHHHCCCCEECCCCCCCCCHHHHHHHHHHHHCCC---CEEEE
T ss_conf 095999887889999999999837-9-869999899187777397860323347888599999999973899---72898
Q ss_pred EEECCCCHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECC
Q ss_conf 994378989999999753972999737610-032789999862886896036
Q gi|254780742|r 63 HQVDALNIKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 63 ~~~D~~d~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~ 113 (419)
..-+++ +.-.+++++ .|+||+|...+ ....+-++|.++|++++..+-
T Consensus 96 ~~~~~~--~~~~~~i~~--~D~Vvd~~dn~~~r~~iN~~c~~~~iplI~g~~ 143 (197)
T cd01492 96 DTDDIS--EKPEEFFSQ--FDVVVATELSRAELVKINELCRKLGVKFYATGV 143 (197)
T ss_pred EECCCC--HHHHHHHHC--CCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 704585--768999828--999999999999999999999981997899981
No 142
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase; InterPro: IPR000706 N -Acetylglutamate (NAG) fulfils distinct biological roles in lower and higher organisms. In prokaryotes, lower eukaryotes and plants it is the first intermediate in the biosynthesis of arginine, whereas in ureotelic (excreting nitrogen mostly in the form of urea) vertebrates, it is an essential allosteric cofactor for carbamyl phosphate synthetase I (CPSI), the first enzyme of the urea cycle. The pathway that leads from glutamate to arginine in lower organisms employs eight steps, starting with the acetylation of glutamate to form NAG. In these species, NAG can be produced by two enzymatic reactions: one catalysed by NAG synthase (NAGS) and the other by ornithine acetyltransferase (OAT). In ureotelic species, NAG is produced exclusively by NAGS. In lower organisms, NAGS is feedback-inhibited by L-arginine, whereas mammalian NAGS activity is significantly enhanced by this amino acid. The NAGS genes of bacteria, fungi and mammals are more diverse than other arginine-biosynthesis and urea-cycle genes. The evolutionary relationship between the distinctly different roles of NAG and its metabolism in lower and higher organisms remains to be determined . The pathway from glutamate to arginine is: NAGS; N-acetylglutamate synthase (2.3.1.1 from EC) (glutamate to N-acetylglutamate) NAGK; N-acetylglutamate kinase (2.7.2.8 from EC) (N-acetylglutamate to N-acetylglutamate-5P) NAGSA; N-acetyl-gamma-glutamyl-phosphate reductase (1.2.1.38 from EC) (N-acetylglutamate-5P to N-acetylglumate semialdehyde) Acetylornithine aminotransferase (2.6.1.11 from EC) (N-acetylglumate semialdehyde to N-acetylornithine) Acetylornithine deacetylase (3.5.1.16 from EC) (N-acetylornithine to ornithine) Arginase (3.5.3.1 from EC) (ornithine to arginine) N-acetyl-gamma-glutamyl-phosphate reductase (1.2.1.38 from EC) (AGPR) , is the enzyme that catalyzes the third step in the biosynthesis of arginine from glutamate, the NADP-dependent reduction of N-acetyl-5-glutamyl phosphate into N-acetylglutamate 5-semialdehyde. In bacteria it is a monofunctional protein of 35 to 38 kD (gene argC), while in fungi it is part of a bifunctional mitochondrial enzyme (gene ARG5,6, arg11 or arg-6) which contains a N-terminal acetylglutamate kinase (2.7.2.8 from EC) domain and a C-terminal AGPR domain. In the Escherichia coli enzyme, a cysteine has been shown to be implicated in the catalytic activity, and the region around this residue is well conserved.; GO: 0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity, 0006526 arginine biosynthetic process.
Probab=98.38 E-value=2.5e-06 Score=61.54 Aligned_cols=198 Identities=12% Similarity=0.081 Sum_probs=122.7
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEE-EEECCHH-HHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHH-H
Q ss_conf 31999849-8779999999996089872599-9639999-99999987343024555557308994378989999999-7
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDIN-IASRTLQ-KCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELI-K 78 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~-va~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~-~ 78 (419)
.+|.|+|| |.+|...+|.|.+|+.. +++ ++..+.. .-+.+.+-.+...... ....++..+...+.++. .
T Consensus 1 ~~V~IvGAsGYtG~EL~RLL~~HP~~--e~~~~~ss~~~~aG~~~~~~~P~L~g~~-----~~~~~~~~~~~~~~~~~L~ 73 (361)
T TIGR01850 1 IKVGIVGASGYTGGELLRLLANHPEV--EITYLVSSRESLAGKPLSEVHPHLRGLV-----DYLNLEPLDDAKLEEIELE 73 (361)
T ss_pred CEEEEEECCCHHHHHHHHHHHCCCCE--EEEEEEEEEEHHCCCCHHHHCCCHHHHH-----CCCCCCCCCHHHHHHHHHC
T ss_conf 96899933444689999998419953--7888887620113852577366111010-----0233366676678886213
Q ss_pred HCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCC--------CC-----CCCCHHHHHHH--HHHHHHCCC
Q ss_conf 5397299973761003278999986288689603664200001--------44-----20000357751--088885188
Q gi|254780742|r 79 KTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKIC--------ES-----PPWYNNYEWSL--LDECRTKSI 143 (419)
Q Consensus 79 ~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~--------~~-----~~~~~~~~~~l--~~~a~~ag~ 143 (419)
+||+|.-++|.-.-..++...++.|+..||+|++-..-... -+ ..|.+..=.-. .++.|+|.+
T Consensus 74 --~~DvVFlAlPhgvs~~~~p~~l~~g~~ViDLSADFRl~d~~~Ye~wYG~h~~~~ll~~avYGLpEl~~~re~i~~A~l 151 (361)
T TIGR01850 74 --DADVVFLALPHGVSMELAPELLEAGVKVIDLSADFRLKDPEVYEKWYGFHAAPELLQEAVYGLPELHGAREEIKGARL 151 (361)
T ss_pred --CCCEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCE
T ss_conf --767899868725569999999847986998883433699799999667788966663115567670105889842957
Q ss_pred EEEECCCHHHHHHHHHHHHHHHHHCCCCC--EE--EEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECC-EEEEEC
Q ss_conf 69953750111488999999997436663--89--7630247888866654256899886225982999999-589954
Q gi|254780742|r 144 TAILGAGFDPGVVNAFARLAQDEYFDKIT--DI--DIIDVNAGKHDKYFATNFDAEINLREFTGVVYSWQKN-QWCVNK 217 (419)
Q Consensus 144 ~~i~~~G~~PGl~~lla~~~~~~~~d~~~--~i--~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~G-~~~~~~ 217 (419)
.+.|||=----+=-+.... ...+.+.-. -| .+.++++|.- -|....+.+..+..+.|+=. .-+..|
T Consensus 152 iAnPGCYpTA~~LaL~PL~-~~~l~~~~~~~i~dakSGvSGAGr~-------as~~~~~~E~~en~~pY~~~G~HRH~P 222 (361)
T TIGR01850 152 IANPGCYPTATLLALAPLL-KEGLIDPTSEIIVDAKSGVSGAGRK-------ASEKSHFPEVNENLRPYKVTGGHRHTP 222 (361)
T ss_pred EECCCCHHHHHHHHHHHHH-HHCCCCCCCCEEEEEEECCCCCCCC-------CCCCCCHHHHHCCCEECCCCCCCCCHH
T ss_conf 6448861789999989999-8315676776589887445566777-------763357344327706203799850279
No 143
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.38 E-value=8.7e-06 Score=57.85 Aligned_cols=83 Identities=14% Similarity=0.218 Sum_probs=65.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECC-HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-877999999999608987259996399-9999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRT-LQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.+||.|+ +++|+.+++.|+++.- ++++.+|+ .+.++++.+.+... ..++...++|+.|.+++.++++..
T Consensus 8 K~~lITGas~GIG~aia~~la~~G~---~V~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~ 79 (250)
T PRK12825 8 RVALVTGAARGIGRAIALRLAAAGA---DVIVHPPSDEAAAEETVAAVEAL-----GRRAQAVQADVTDAAALEAAVEEL 79 (250)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHHHHHC-----CCCEEEEEEECCCHHHHHHHHHHH
T ss_conf 8899938955899999999998799---89999798878999999999853-----994899994189999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||+++.+.
T Consensus 80 ~~~~g~iDilInnAg~~~ 97 (250)
T PRK12825 80 VERFGAIDILVNNAGITG 97 (250)
T ss_pred HHHCCCCCEEEECCCCCC
T ss_conf 997699989998998899
No 144
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.37 E-value=8.3e-06 Score=57.99 Aligned_cols=81 Identities=11% Similarity=0.166 Sum_probs=65.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|| +++|+.++..|++... ++++.|||.++++++.+++.... .++...++|+.|.+++.+++...
T Consensus 6 Kv~lITGas~GIG~aiA~~~A~~Ga---~Vii~~r~~~~l~~~~~~i~~~g-----~~~~~~~~d~~~~~~v~~~~~~i~ 77 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGA---TLILCDQDQSALNDTYEQCSALT-----DNVYSYQLKDFSQESIRHLFDAIE 77 (227)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCC-----CCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 9999979887999999999998799---99999699999999999999758-----974899951661999999999999
Q ss_pred ---C--CCEEEECCCC
Q ss_conf ---9--7299973761
Q gi|254780742|r 81 ---N--SQIIINVGSS 91 (419)
Q Consensus 81 ---~--~dvVin~~~p 91 (419)
+ .|++||+++.
T Consensus 78 ~~~g~~iDvLVNNa~~ 93 (227)
T PRK08862 78 QQFNRAPDVLVNNWTS 93 (227)
T ss_pred HHHCCCCEEEEECCCC
T ss_conf 9958997499856645
No 145
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.36 E-value=1e-05 Score=57.44 Aligned_cols=84 Identities=15% Similarity=0.210 Sum_probs=69.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++..- ..+++.+|+.++++++++++... ..+....+.|+.|.+++.++++..
T Consensus 7 K~alVTGas~GIG~aiA~~la~~Ga--~vv~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (268)
T PRK06198 7 KIALVTGGTQGLGAAIARLFAERGA--AGLVICGRSAEKGEAKAAELEAL-----GAKAVFVQADLAKVEDCRAVVAAAD 79 (268)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC--CEEEEECCCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 8899958577899999999998799--38999629888999999999954-----9967999826899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||++|-..
T Consensus 80 ~~fG~iDiLVNnAG~~~ 96 (268)
T PRK06198 80 EAFGRLDALVNAAGLTD 96 (268)
T ss_pred HHHCCCCEEEECCCCCC
T ss_conf 98399989998997899
No 146
>PRK07411 hypothetical protein; Validated
Probab=98.36 E-value=5.6e-06 Score=59.14 Aligned_cols=104 Identities=18% Similarity=0.295 Sum_probs=74.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-------------------HHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 7319998498779999999996089872599963999-------------------999999987343024555557308
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-------------------QKCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
+.+|+|+|+|+.|++++.||++.. + .+|+++|.|. .|++..++.+...++. .+++.
T Consensus 38 ~a~VlvvG~GGLG~p~~~yLaaaG-v-G~i~ivD~D~ve~sNL~RQ~l~~~~~vG~~K~~~a~~~l~~lnp~---~~i~~ 112 (390)
T PRK07411 38 AASVLCIGTGGLGSPLLLYLAAAG-I-GRIGIVDFDIVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPY---CQVDL 112 (390)
T ss_pred HCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCC---CCCEE
T ss_conf 497899888723799999999838-9-759997489946234785436662007971899999999986898---64210
Q ss_pred EEECCCCHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECC
Q ss_conf 994378989999999753972999737610-032789999862886896036
Q gi|254780742|r 63 HQVDALNIKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 63 ~~~D~~d~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~ 113 (419)
....+ +.+...+++++ .|+||.|.--| ..+.+-++|+..++++|--+.
T Consensus 113 ~~~~l-~~~na~~li~~--~DvvvD~tDNf~tRylindac~~~~~PlV~ga~ 161 (390)
T PRK07411 113 YETRL-SSENALDILAP--YDVVVDGTDNFPTRYLVNDACVLLNKPNVYGSI 161 (390)
T ss_pred HHHHC-CHHHHHHHHCC--CCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 34325-55248874228--868996788889999989999996998799764
No 147
>PRK05599 hypothetical protein; Provisional
Probab=98.36 E-value=5.9e-06 Score=58.99 Aligned_cols=81 Identities=19% Similarity=0.313 Sum_probs=64.9
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC--
Q ss_conf 1999849-8779999999996089872599963999999999987343024555557308994378989999999753--
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT-- 80 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-- 80 (419)
.|||.|| .++|..+++.|+ +. .++++++|+.++++++++++..... ..+....+|+.|.++..+++++.
T Consensus 2 tvlITGASsGIG~a~A~~lA-~G---~~vvl~~R~~e~l~~l~~~l~~~g~----~~v~~~~~Dvtd~~~~~~~v~~~~~ 73 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLA-HG---EDVVLAARRPEAAGGLAEDLRQLGA----TSVHVLSFDATDLDSHRELVKQTQE 73 (246)
T ss_pred EEEEECCCHHHHHHHHHHHH-CC---CCEEEEECCHHHHHHHHHHHHHHCC----CEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 89998886899999999998-59---9499999999999999999986259----7189972899999999999999998
Q ss_pred ---CCCEEEECCCCC
Q ss_conf ---972999737610
Q gi|254780742|r 81 ---NSQIIINVGSSF 92 (419)
Q Consensus 81 ---~~dvVin~~~p~ 92 (419)
+.|+++|.+|-.
T Consensus 74 ~~g~id~lv~naGi~ 88 (246)
T PRK05599 74 LAGEISLAVVAFGIL 88 (246)
T ss_pred HCCCCEEEEECCCCC
T ss_conf 619843999877667
No 148
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.36 E-value=6.8e-06 Score=58.55 Aligned_cols=84 Identities=18% Similarity=0.254 Sum_probs=68.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 731999849-87799999999960898725999-6399999999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINI-ASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~v-a~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
+|.+||.|+ +++|+.+++.|++..- ++++ ++++.++++++++++.... .+....++|+.|.+++.+++++
T Consensus 9 ~KvalVTGas~GIG~aiA~~la~~Ga---~V~i~~~~~~~~~~~~~~~i~~~g-----~~~~~~~~Dl~~~~~~~~~v~~ 80 (256)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHGF---DVAVHYNRSRDEAEALAAEIRALG-----RRAVALQADLADEAQVRALVAR 80 (256)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHH
T ss_conf 99799948867899999999998799---899984999899999999999649-----9189997558999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||.+|.+.
T Consensus 81 ~~~~~G~iDiLVnNAg~~~ 99 (256)
T PRK09134 81 ASAALGPITLLVNNASLFE 99 (256)
T ss_pred HHHHHCCCCEEEECCCCCC
T ss_conf 9998299878998871168
No 149
>PRK08328 hypothetical protein; Provisional
Probab=98.36 E-value=4e-06 Score=60.09 Aligned_cols=104 Identities=17% Similarity=0.213 Sum_probs=70.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHH--------------------HHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 73199984987799999999960898725999639999--------------------9999998734302455555730
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQ--------------------KCSKIIDSIYKKKSLKIDGKLA 61 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~--------------------~~~~~~~~l~~~~~~~~~~~~~ 61 (419)
+++|+|+|+|++|+.++.+|++.. + .++++.|.|.- |.....+.+...++ ..+++
T Consensus 27 ~s~VlvvG~GGlGs~~~~~La~~G-v-G~i~lvD~D~ve~SNLnRQil~~~~diG~~~K~~~a~~~l~~iNp---~v~i~ 101 (230)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAG-V-GTVLLIDEQTPELSNLNRQILHWEEDVGKNPKPISAKWKLERFNS---DIKIE 101 (230)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEECCCEEECCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHCC---CEEEE
T ss_conf 597899887878999999999848-9-868987487875156325540308774771039999999997599---50575
Q ss_pred EEEECCCCHHHHHHHHHHCCCCEEEECCCCCC-CHHHHHHHHHCCCCEEEECC
Q ss_conf 89943789899999997539729997376100-32789999862886896036
Q gi|254780742|r 62 IHQVDALNIKAVVELIKKTNSQIIINVGSSFL-NMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 62 ~~~~D~~d~~~l~~~~~~~~~dvVin~~~p~~-~~~v~~a~i~~g~hyvD~s~ 113 (419)
.....+ +.+.+.++++ ++|+||+|.-.|. .+.+-++|.++++++|.-+.
T Consensus 102 ~~~~~i-~~~n~~~ll~--~~DlViD~tDn~~tr~~ln~~c~~~~iPlI~g~v 151 (230)
T PRK08328 102 TFVGRL-TEENIDEVLK--GVDVIVDCLDNFETRYLLDDYAHKKGIPLVHGAV 151 (230)
T ss_pred HHHHHH-HHHHHHHHHC--CCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 266442-3777986200--5989999889989999999999983997799996
No 150
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.35 E-value=1e-05 Score=57.44 Aligned_cols=83 Identities=18% Similarity=0.319 Sum_probs=67.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-877999999999608987259996-3999999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIA-SRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.+||.|+ +++|+.+++.|++..- ++++. .|+.++++++++++... ..+....+.|+.|++++.++++..
T Consensus 5 KvalVTGas~GIG~aia~~la~~Ga---~Vvi~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dv~d~~~v~~~~~~~ 76 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAKEGY---DIAINYARSRKAAEETANEIEQL-----GRKALVVKANVGDVEKIKEMFSQI 76 (250)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 9899958766999999999998899---89997599989999999999954-----995899984799999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.++...
T Consensus 77 ~~~~G~iDiLVnnAg~~~ 94 (250)
T PRK08063 77 DEHFGRLDVFVNNAASGV 94 (250)
T ss_pred HHHCCCCCEEEECCCCCC
T ss_conf 998099889998785678
No 151
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.35 E-value=9.7e-06 Score=57.50 Aligned_cols=86 Identities=17% Similarity=0.220 Sum_probs=69.2
Q ss_pred CCEEEEECC-C-HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 731999849-8-77999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGA-G-GVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~Ga-G-~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
-|++||.|+ | ++|+.+++.|++..- ++++.||+.+++.+.++++..... ..++....+|+.|.+++.+++..
T Consensus 16 gKvalVTGgsg~GIG~a~a~~la~~Ga---~V~i~d~~~~~~~e~~~~~~~~~g---~~~v~~~~~Dvt~~~~v~~~v~~ 89 (261)
T PRK07831 16 GKVVVVTAAAGTGIGSATARRALEEGA---DVVISDIHERRLGETADELAAELG---LGRVEGVVCDVTSEAQVDALIDA 89 (261)
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHCC---CCEEEEEECCCCCHHHHHHHHHH
T ss_conf 984999499964789999999998799---899980877778999999998438---77289997568999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||.+|-..
T Consensus 90 ~~~~~G~iDiLVNNAG~~~ 108 (261)
T PRK07831 90 AVERLGRLDVLVNNAGLGG 108 (261)
T ss_pred HHHHHCCCCEEEECCCCCC
T ss_conf 9998299869998886689
No 152
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.35 E-value=9.3e-06 Score=57.63 Aligned_cols=80 Identities=16% Similarity=0.260 Sum_probs=64.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|+++.- +++++||+.+.++...+.. ..+....++|+.|.+++.+++++.
T Consensus 16 KvalVTGas~GIG~aiA~~la~~Ga---~V~i~d~~~~~~~~~~~~~--------~~~~~~~~~Dvt~~~~v~~~v~~~~ 84 (255)
T PRK06841 16 KVAVVTGGASGIGHAIAELFAAKGA---RVALLDRSEDVAEVAAQLL--------GGNAKGLVCDVSDSQSVEAAVAAAI 84 (255)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHC--------CCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 9999979677899999999998799---9999969878999999845--------9966999984699999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 85 ~~~g~iDiLVNNAGi~~ 101 (255)
T PRK06841 85 SAFGRIDILVNSAGVAL 101 (255)
T ss_pred HHHCCCCEEEECCCCCC
T ss_conf 98199879998997899
No 153
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.35 E-value=4.8e-06 Score=59.60 Aligned_cols=99 Identities=18% Similarity=0.250 Sum_probs=71.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|+++|+|+ |.||+.++..|++... ++++.+||.+|++++++++..+.. .....++..+.+...++++
T Consensus 28 g~~~~V~G~tG~vG~~~A~~lA~~Ga---~v~lv~R~~ek~~~~a~~i~~r~g------~~~~~~~~~~~~~~~~~l~-- 96 (194)
T cd01078 28 GKTAVVLGGTGPVGQRAAVLLAREGA---RVVLVGRDLERAQKAADSLRARFG------EGVGAVETSDDAARAAAIK-- 96 (194)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHCC------CCCCCCCCCCHHHHHHHHC--
T ss_conf 98899985885789999999998399---799995878889999999999709------8731135788778997746--
Q ss_pred CCCEEEECCCCCCCHHHHHHHHH---CCCCEEEECC
Q ss_conf 97299973761003278999986---2886896036
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRACID---SNVAYIDTAI 113 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~i~---~g~hyvD~s~ 113 (419)
.+|+|+++...-. .++..... .+.=.+|+.-
T Consensus 97 ~adiV~~a~aAGv--~~~~~~~~~~k~l~Vv~DVNA 130 (194)
T cd01078 97 GADVVFAAGAAGV--ELLEKLAWAPKPLAVAADVNA 130 (194)
T ss_pred CCCEEEECCHHHH--HHHHHHHHCCCCCEEEEECCC
T ss_conf 6989996427778--887888850888659986589
No 154
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.35 E-value=7.9e-06 Score=58.13 Aligned_cols=79 Identities=9% Similarity=0.161 Sum_probs=65.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|.+||-|+ +++|+.+++.|++... ++++.||+.++++++.+..+ .++...++|+.|.+++.++++..
T Consensus 5 gKvalITGgs~GIG~aia~~~a~~Ga---~V~i~~r~~~~l~~~~~~~g--------~~~~~~~~Dv~~~~~~~~~v~~~ 73 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGA---RVAVLDKSAAGLQELEAAHG--------DAVVGVEGDVRSLDDHKEAVARC 73 (262)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCC--------CCEEEEECCCCCHHHHHHHHHHH
T ss_conf 98899906787899999999998799---99999899899999998679--------96799984579999999999999
Q ss_pred -----CCCEEEECCCC
Q ss_conf -----97299973761
Q gi|254780742|r 81 -----NSQIIINVGSS 91 (419)
Q Consensus 81 -----~~dvVin~~~p 91 (419)
+.|++||.+|.
T Consensus 74 ~~~~G~iDiLVnNAG~ 89 (262)
T TIGR03325 74 VAAFGKIDCLIPNAGI 89 (262)
T ss_pred HHHHCCCCEEEECCCC
T ss_conf 9984998889972651
No 155
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=98.35 E-value=1e-05 Score=57.38 Aligned_cols=134 Identities=14% Similarity=0.235 Sum_probs=88.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH---HHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 731999849877999999999608987259996399999999---99873430245555573089943789899999997
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSK---IIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
.|+++|+|||+.+++++..|+... . .+++|..|+.+++++ +++.+... ........+..|...+.+.+.
T Consensus 124 ~k~~lIlGaGGaa~Ai~~~l~~~g-~-~~i~i~nR~~~~~~~~~~~a~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 195 (288)
T PRK12749 124 GKTMVLLGAGGASTAIGAQGAIEG-L-KEIKLFNRRDEFFDKALAFAQRVNEN------TDCVVTVTDLADQQAFAEALA 195 (288)
T ss_pred CCEEEEEECCHHHHHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHHHHC------CCCEEEECCCCHHHHHHHHHC
T ss_conf 776899823458899999999769-9-87999968855789999999986322------575577434101456776513
Q ss_pred HCCCCEEEECCCCCCC----HHHH--HHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHH
Q ss_conf 5397299973761003----2789--999862886896036642000014420000357751088885188699537501
Q gi|254780742|r 79 KTNSQIIINVGSSFLN----MSVL--RACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFD 152 (419)
Q Consensus 79 ~~~~dvVin~~~p~~~----~~v~--~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~ 152 (419)
.+|++||+.+.-+. ..+. ...+..+.-++|+.|...+. .+=..|+++|...+.|.
T Consensus 196 --~~dliiN~Tp~Gm~~~~~~~~~~~~~~~~~~~~v~D~vY~P~~T--------------~ll~~a~~~G~~~i~Gl--- 256 (288)
T PRK12749 196 --SADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMT--------------KLLQQAQQAGCKTIDGY--- 256 (288)
T ss_pred --CCCEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCHHH--------------HHHHHHHHCCCCEECHH---
T ss_conf --46555236457778776445566464569888999972395662--------------99999998839161679---
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 11488999999997
Q gi|254780742|r 153 PGVVNAFARLAQDE 166 (419)
Q Consensus 153 PGl~~lla~~~~~~ 166 (419)
.|+..+++.+
T Consensus 257 ----~MLv~Qa~~~ 266 (288)
T PRK12749 257 ----GMLLWQGAEQ 266 (288)
T ss_pred ----HHHHHHHHHH
T ss_conf ----9999999999
No 156
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.34 E-value=6.3e-06 Score=58.80 Aligned_cols=98 Identities=14% Similarity=0.276 Sum_probs=68.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC-CHHHHHHHHH
Q ss_conf 973199984-98779999999996089872599963999999999987343024555557308994378-9899999997
Q gi|254780742|r 1 MKKNVLIIG-AGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDAL-NIKAVVELIK 78 (419)
Q Consensus 1 M~k~ilv~G-aG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~-d~~~l~~~~~ 78 (419)
||| |||.| +|++|+..+..|.++.+. ++++-|+..++...+. ..++++..+.|+. |.+.+...++
T Consensus 1 MKk-ILVTGgaGFIGs~Lv~~Ll~~~~~--~V~~~d~~~~~~~~~~----------~~~~~~~~~gDi~~~~~~~~~~~~ 67 (347)
T PRK11908 1 MKK-VLILGVNGFIGHHLTKRILETTDW--EVYGMDMQTDRLGDLV----------NHPRMHFFEGDITINKEWIEYHVK 67 (347)
T ss_pred CCE-EEEECCCCHHHHHHHHHHHHHCCC--EEEEEECCCCCHHHHC----------CCCCEEEEECCCCCCHHHHHHHHC
T ss_conf 988-999757438999999999982897--8999979976367755----------799859997754469999997660
Q ss_pred HCCCCEEEECCCCC-----C-C------------HHHHHHHHHCCCCEEEECC
Q ss_conf 53972999737610-----0-3------------2789999862886896036
Q gi|254780742|r 79 KTNSQIIINVGSSF-----L-N------------MSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 79 ~~~~dvVin~~~p~-----~-~------------~~v~~a~i~~g~hyvD~s~ 113 (419)
++|+|++++.-. . + ..++++|.+.+.++|=+|-
T Consensus 68 --~~D~V~HlAa~~~~~~~~~~p~~~~~~nv~~t~~ll~~~~~~~~r~if~SS 118 (347)
T PRK11908 68 --KCDVVLPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPST 118 (347)
T ss_pred --CCCEEEEEHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
T ss_conf --598897520003648888688999999999999999999973983896266
No 157
>PRK06484 short chain dehydrogenase; Validated
Probab=98.34 E-value=1e-05 Score=57.30 Aligned_cols=79 Identities=20% Similarity=0.380 Sum_probs=65.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||-|+ +++|+.+++.|+++.. ++++.||+.+++++.++++.. +....++|+.|.+++.+++++.
T Consensus 5 GKvalVTGas~GIG~aiA~~la~~Ga---~V~~~dr~~~~~~~~~~~~g~--------~~~~~~~Dvsd~~~v~~~v~~~ 73 (530)
T PRK06484 5 ARVVLVTGAAGGIGRACCQRFARAGD---RVVMADRDLAACTEEAERLGS--------RHVALQLDVSDEAQVEHAMDGL 73 (530)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCCC--------CCEEEEEECCCHHHHHHHHHHH
T ss_conf 98999978366899999999998799---999996888999999997099--------7179998489999999999999
Q ss_pred -----CCCEEEECCCC
Q ss_conf -----97299973761
Q gi|254780742|r 81 -----NSQIIINVGSS 91 (419)
Q Consensus 81 -----~~dvVin~~~p 91 (419)
+.|++||.+|-
T Consensus 74 ~~~~G~iDiLVNNAGi 89 (530)
T PRK06484 74 LQQFGRIDVLVNNAGI 89 (530)
T ss_pred HHHCCCCCEEEECCCC
T ss_conf 9972999899989989
No 158
>PRK07776 consensus
Probab=98.33 E-value=1e-05 Score=57.34 Aligned_cols=80 Identities=15% Similarity=0.227 Sum_probs=66.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|++||-|+ +++|+.+++.|+++.- ++++.||+.+++++.++++.. .+......|+.|.+++.+++++.
T Consensus 8 gKv~lITG~~~GIG~aiA~~la~~Ga---~V~i~~~~~~~l~~~~~~l~~-------~~~~~~~~Dv~~~~~~~~~~~~~ 77 (252)
T PRK07776 8 GRTAIVTGASRGIGLAIAQALAAAGA---NVVITARKQEALDEAAAQLGA-------ERALGVAGHAVDEEHAREAVDLT 77 (252)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHCC-------CCEEEEEEECCCHHHHHHHHHHH
T ss_conf 99899947787999999999998799---899997988999999998479-------95799997428999999999999
Q ss_pred -----CCCEEEECCCC
Q ss_conf -----97299973761
Q gi|254780742|r 81 -----NSQIIINVGSS 91 (419)
Q Consensus 81 -----~~dvVin~~~p 91 (419)
+.|++||.++-
T Consensus 78 ~~~~g~iDilVnNAg~ 93 (252)
T PRK07776 78 LERFGSVDILVNNAGT 93 (252)
T ss_pred HHHHCCCCEEEECCCC
T ss_conf 9984998699987866
No 159
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=98.33 E-value=8.9e-05 Score=51.01 Aligned_cols=105 Identities=23% Similarity=0.354 Sum_probs=72.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH---------------------HHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 7319998498779999999996089872599963999---------------------9999999873430245555573
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL---------------------QKCSKIIDSIYKKKSLKIDGKL 60 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~---------------------~~~~~~~~~l~~~~~~~~~~~~ 60 (419)
+.+|+|+|+|+.|+.++.+|+... + .++++.|.|. .|++..++.+.+.++. .++
T Consensus 19 ~s~VlVvG~GGLG~~v~~~La~aG-V-g~i~ivD~D~Ve~sNL~RQ~l~~~~~~diG~~Ka~~a~~~l~~lNp~---v~i 93 (198)
T cd01485 19 SAKVLIIGAGALGAEIAKNLVLAG-I-DSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPN---VKL 93 (198)
T ss_pred HCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCC---CEE
T ss_conf 098999877889999999999749-9-86999959963533577575026541116872999999999977999---779
Q ss_pred EEEEECC-CCHHHHHHHHHHCCCCEEEECCCCCC-CHHHHHHHHHCCCCEEEECC
Q ss_conf 0899437-89899999997539729997376100-32789999862886896036
Q gi|254780742|r 61 AIHQVDA-LNIKAVVELIKKTNSQIIINVGSSFL-NMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 61 ~~~~~D~-~d~~~l~~~~~~~~~dvVin~~~p~~-~~~v~~a~i~~g~hyvD~s~ 113 (419)
++..-+. .+.+...+++++ .|+||.|.-.+. ...+-++|.++++++|.-+.
T Consensus 94 ~~~~~~~~~~~~n~~~~~~~--~DlVvd~~dn~~~r~~in~~c~~~~iPlI~ga~ 146 (198)
T cd01485 94 SIVEEDSLSNDSNIEEYLQK--FTLVIATEENYERTAKVNDVCRKHHIPFISCAT 146 (198)
T ss_pred EEEECCCCCCHHHHHHHHHC--CCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 99822445778689999848--999999999999999999999992998899974
No 160
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.32 E-value=8.6e-06 Score=57.87 Aligned_cols=93 Identities=17% Similarity=0.303 Sum_probs=69.1
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 1999849-877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+|||.|+ |++|+.+++.|.++.. ++.+.+|+....+.+. ...++..+.|+.|.+.+.+.++ ++
T Consensus 2 riLVTGgtGfiG~~l~~~L~~~G~---~V~~l~r~~~~~~~~~-----------~~~~~~~~gDl~d~~~~~~~~~--~~ 65 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLERGE---EVRVLVRPTSDRRNLE-----------GLDVEIVEGDLRDPASLRKALA--GC 65 (328)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCHHHHC-----------CCCCEEEEEECCCHHHHHHHHH--CC
T ss_conf 499986777999999999997849---8999989998655652-----------1797799820799999999971--78
Q ss_pred CEEEECCCCC----------CC------HHHHHHHHHCCCC-EEEEC
Q ss_conf 2999737610----------03------2789999862886-89603
Q gi|254780742|r 83 QIIINVGSSF----------LN------MSVLRACIDSNVA-YIDTA 112 (419)
Q Consensus 83 dvVin~~~p~----------~~------~~v~~a~i~~g~h-yvD~s 112 (419)
|+||+++... +. ..++++|.++|+. +|=+|
T Consensus 66 d~ViH~Aa~~~~~~~~~~~~~~~Nv~gt~nll~aa~~~~v~r~V~~S 112 (328)
T TIGR03466 66 RALFHVAADYRLWAPDPEEMYRANVEGTRNLLRAALEAGVERVVYTS 112 (328)
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 58976134234467998999999999999999999972987431563
No 161
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.32 E-value=1.2e-05 Score=56.85 Aligned_cols=81 Identities=20% Similarity=0.301 Sum_probs=65.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|+++.- +++++||+. +++++++++... ..+....++|+.|.+++.+++++.
T Consensus 7 KvalVTGas~GIG~aiA~~la~~Ga---~Vvi~d~~~-~~~~~~~~~~~~-----g~~~~~~~~Dvsd~~~v~~~v~~~~ 77 (263)
T PRK08226 7 KTALITGALQGIGEGIARVFARHGA---NLILLDISP-EIEKLADELCGR-----GHRCTAVVADVRDPASVAAAIKRAK 77 (263)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCH-HHHHHHHHHHHC-----CCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 8899947377999999999998799---899996987-999999999836-----9917999941799999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 78 ~~~G~iDiLVNNAGi~ 93 (263)
T PRK08226 78 EKEGRIDILVNNAGVC 93 (263)
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9839986999899778
No 162
>PRK08945 short chain dehydrogenase; Provisional
Probab=98.32 E-value=1.1e-05 Score=57.08 Aligned_cols=84 Identities=18% Similarity=0.235 Sum_probs=60.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECC--CCHHHHHHHHH
Q ss_conf 731999849-877999999999608987259996399999999998734302455555730899437--89899999997
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDA--LNIKAVVELIK 78 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~--~d~~~l~~~~~ 78 (419)
.|.+||.|+ +++|+.+++.|+++.- ++++.+|+.++++++++++..... .+..+..+|+ .+.+++.++++
T Consensus 13 gK~~lITGas~GIG~aiA~~la~~Ga---~Vil~~r~~~~l~~~~~el~~~~~----~~~~~~~~d~~~~~~~~~~~~~~ 85 (245)
T PRK08945 13 DRIILVTGAGDGIGREAALTYARHGA---TVILLGRTEEKLEAVYDEIEAAGG----PQPAIIPLDLLGATEQNYQDLAD 85 (245)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCCC----CCEEEEEEECCCCCHHHHHHHHH
T ss_conf 79899948861899999999998799---899996988999999999997479----84489994467599999999999
Q ss_pred HC-----CCCEEEECCCCC
Q ss_conf 53-----972999737610
Q gi|254780742|r 79 KT-----NSQIIINVGSSF 92 (419)
Q Consensus 79 ~~-----~~dvVin~~~p~ 92 (419)
.. +.|++||.+|-+
T Consensus 86 ~i~~~~g~iD~lVnNAG~~ 104 (245)
T PRK08945 86 TIEEQFGRLDGVLHNAGLL 104 (245)
T ss_pred HHHHHHCCCCEEEECCCCC
T ss_conf 9999809987999888755
No 163
>PRK06484 short chain dehydrogenase; Validated
Probab=98.32 E-value=1.2e-05 Score=56.98 Aligned_cols=79 Identities=16% Similarity=0.210 Sum_probs=63.5
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ .++|+.+++.|+++.. +++++|||.++++++++++... ....+.|+.|.+++.+++.+.
T Consensus 275 KvalVTGaa~GIG~aiA~~la~~GA---~Vvi~d~~~~~~~~~~~~~g~~--------~~~~~~Dv~~~~~v~~~v~~~~ 343 (530)
T PRK06484 275 RVVCVTGGASGIGAAIADRFAALGD---RVAIIDSDGEEAVKLREILGGE--------HLSWQVDITDEASVESAFAGIQ 343 (530)
T ss_pred CEEEECCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCCCC--------CEEEEECCCCHHHHHHHHHHHH
T ss_conf 8999928767899999999998879---8999958889999999973997--------3699953899999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|..
T Consensus 344 ~~fG~iDiLVNNAGi~ 359 (530)
T PRK06484 344 GRLGPLDVLVNNAGIA 359 (530)
T ss_pred HHCCCCCEEEECCCCC
T ss_conf 9829988999897789
No 164
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=98.31 E-value=2.9e-05 Score=54.35 Aligned_cols=101 Identities=14% Similarity=0.243 Sum_probs=70.5
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH------------------HHHHHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf 19998498779999999996089872599963999------------------999999987343024555557308994
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL------------------QKCSKIIDSIYKKKSLKIDGKLAIHQV 65 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~ 65 (419)
||+|+|+|+.|+.++.+|++.. + .+++++|.|. .|++..++.+.+.++ .+++...
T Consensus 1 kV~IvG~GGLG~~~a~~La~aG-v-g~i~lvD~D~Ve~SNL~RQ~~~~~diG~~Ka~~a~~~l~~iNp-----~i~i~~~ 73 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSG-V-GNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINP-----FVKIEAI 73 (174)
T ss_pred CEEEECCCHHHHHHHHHHHHHC-C-CEEEEEECCCCCCCCHHCCHHHHHHCCCHHHHHHHHHHHHHCC-----CCEEEEE
T ss_conf 9899876788999999999818-9-7399998994666443013247774797499999999998797-----9889999
Q ss_pred CC-CCHHHHHHHHHHCCCCEEEECCCCCC-CHHHHHHHHH-CCCCEEEECC
Q ss_conf 37-89899999997539729997376100-3278999986-2886896036
Q gi|254780742|r 66 DA-LNIKAVVELIKKTNSQIIINVGSSFL-NMSVLRACID-SNVAYIDTAI 113 (419)
Q Consensus 66 D~-~d~~~l~~~~~~~~~dvVin~~~p~~-~~~v~~a~i~-~g~hyvD~s~ 113 (419)
+. .+.+.+.+++++ +|+|++|.--+. ...+.++|.. .+++++-.++
T Consensus 74 ~~~l~~~n~~~l~~~--~D~ViD~~Dn~~tr~~l~~~~~~~~~~plv~as~ 122 (174)
T cd01487 74 NIKIDENNLEGLFGD--CDIVVEAFDNAETKAMLAESLLGNKNKPVVCASG 122 (174)
T ss_pred ECCCCHHHHHHHHHC--CCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 144499999999837--9999999999899999999999987995999974
No 165
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.31 E-value=1.1e-05 Score=57.20 Aligned_cols=78 Identities=17% Similarity=0.216 Sum_probs=61.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|| .|||.|| +|+|+.+++.|+++. .++++++||.++++++.+.. ..+...++|+.|.+++.+.+.+
T Consensus 1 Mk-tvlITGassGIG~a~A~~la~~G---~~Vi~~~R~~~~l~~~~~~~---------~~~~~~~~Dvtd~~~~~~~~~~ 67 (241)
T PRK06101 1 MT-SVLITGATSGIGKQLALDYAKAG---WKVIACGRNEAVLDELHDQS---------SNIFTLAFDVTDYEETKAALSQ 67 (241)
T ss_pred CC-EEEEECCCHHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHC---------CCEEEEEEECCCHHHHHHHHHH
T ss_conf 99-89992240499999999999879---98999989999999999732---------8804898522679999999997
Q ss_pred CC--CCEEEECCCC
Q ss_conf 39--7299973761
Q gi|254780742|r 80 TN--SQIIINVGSS 91 (419)
Q Consensus 80 ~~--~dvVin~~~p 91 (419)
.+ .|++|+.+|.
T Consensus 68 ~~~~~d~~i~naG~ 81 (241)
T PRK06101 68 LPFIPELWIFNAGD 81 (241)
T ss_pred HCCCCCEEEECCCC
T ss_conf 18777789998866
No 166
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.31 E-value=1.3e-05 Score=56.70 Aligned_cols=83 Identities=20% Similarity=0.278 Sum_probs=68.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|+.|||-|+ .|+|..+++.|+++. -+++++.||.+|+++.++++.. ...++.+..+|..|.++++++....
T Consensus 6 ~~TvvITGansGIG~eta~~La~~g---a~Vil~~R~~~k~~~a~~~i~~-----~~~~~~~~~lDLssl~SVr~~a~~~ 77 (322)
T PRK07453 6 KGTVLITGASSGVGLYAAKALAKRG---WHVIMACRSLKKAEAAAQELGI-----PPDSYTIIHIDLGDLDSVRRFVDDF 77 (322)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHCC-----CCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 9839996888689999999999789---9899997999999999999618-----8987799989889999999999999
Q ss_pred -----CCCEEEECCCCC
Q ss_conf -----972999737610
Q gi|254780742|r 81 -----NSQIIINVGSSF 92 (419)
Q Consensus 81 -----~~dvVin~~~p~ 92 (419)
+.|++||-+|-+
T Consensus 78 ~~~~~~lDiLInNAGv~ 94 (322)
T PRK07453 78 RALGKPLDALVCNAAVY 94 (322)
T ss_pred HHHCCCCEEEEECCCCC
T ss_conf 98659840898656544
No 167
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.31 E-value=1.6e-05 Score=56.05 Aligned_cols=84 Identities=18% Similarity=0.311 Sum_probs=67.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 731999849-87799999999960898725999-6399999999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINI-ASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~v-a~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
-|.+||.|+ +++|+.+++.|+++.. ++++ .+|+.++++++++++.... .++...++|+.|.+++.++++.
T Consensus 5 gK~vlITGgs~GIG~aia~~la~~G~---~V~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~Dl~~~~~~~~~~~~ 76 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA---KVVIAYDKNEEAANELLEEIKEVG-----GDAIAVKADVSSEDDVENLVEQ 76 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHH
T ss_conf 98899937845899999999998799---899981799899999999999639-----9089998358999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||.+|...
T Consensus 77 ~~~~~g~iD~lVnnAg~~~ 95 (247)
T PRK05565 77 IVEKFGKIDILVNNAGISK 95 (247)
T ss_pred HHHHCCCCCEEEECCCCCC
T ss_conf 9998099849998998789
No 168
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.31 E-value=1e-05 Score=57.29 Aligned_cols=78 Identities=17% Similarity=0.171 Sum_probs=64.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|++||-|+ +++|+.+++.|++... ++++.||+.+.++++.+++. ....++|+.|.+.+.+.++++
T Consensus 10 K~~lVTG~~~GIG~aia~~la~~Ga---~V~~~~r~~~~~~~~~~~~~----------~~~~~~Dv~~~~~v~~~~~~~g 76 (245)
T PRK07060 10 KSVLVTGASSGIGRACAVALAARGA---RVVAAARNQADLDRLAGETG----------CEPLRLDVGDDAAIRAALAGAG 76 (245)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHC----------CEEEEEECCCHHHHHHHHHHCC
T ss_conf 9899947776899999999998799---99999799899999998639----------8799980799999999999659
Q ss_pred CCCEEEECCCCCC
Q ss_conf 9729997376100
Q gi|254780742|r 81 NSQIIINVGSSFL 93 (419)
Q Consensus 81 ~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 77 ~iDilVnnAG~~~ 89 (245)
T PRK07060 77 AFDGLVNCAGIAS 89 (245)
T ss_pred CCCEEEECCCCCC
T ss_conf 9989998988799
No 169
>pfam00899 ThiF ThiF family. This family contains a repeated domain in ubiquitin activating enzyme E1 and members of the bacterial ThiF/MoeB/HesA family.
Probab=98.30 E-value=1.3e-05 Score=56.70 Aligned_cols=104 Identities=16% Similarity=0.295 Sum_probs=71.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECC-------------------HHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 731999849877999999999608987259996399-------------------9999999987343024555557308
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRT-------------------LQKCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
..+|+|+|+|++|+.++..|++.. . .++++.|.| ..|++.+++.+...++. .+++.
T Consensus 1 ~skVlivG~GglG~~~~~~La~~G-v-g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~---~~i~~ 75 (134)
T pfam00899 1 SSRVLVVGAGGLGSPAAEYLARAG-V-GKLTLVDFDTVELSNLNRQILFTESDIGKPKAEVAKERLRAINPD---VEVEA 75 (134)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHC-C-CEEEEEECCCCCCCCCCCEEECCHHHCCCEEHHHHHHHHHHHCCC---CEEEE
T ss_conf 988999898889999999999938-9-749999895676322272242336466881079999999977899---58999
Q ss_pred EEECCCCHHHHHHHHHHCCCCEEEECCCCCC-CHHHHHHHHHCCCCEEEECC
Q ss_conf 9943789899999997539729997376100-32789999862886896036
Q gi|254780742|r 63 HQVDALNIKAVVELIKKTNSQIIINVGSSFL-NMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 63 ~~~D~~d~~~l~~~~~~~~~dvVin~~~p~~-~~~v~~a~i~~g~hyvD~s~ 113 (419)
..-.+ +.+.+.+++++ +|+||+|...+. ...+-++|.++++++++.+.
T Consensus 76 ~~~~i-~~~~~~~~~~~--~DvVi~~~Dn~~~r~~ln~~c~~~~ip~i~~~~ 124 (134)
T pfam00899 76 YPERL-TPENLEELLKG--ADLVVDALDNFAARYLLNDACVKRGIPLISAGA 124 (134)
T ss_pred EECCC-CHHHHHHCCCC--CCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 92567-97787642644--889999989999999999999985998999554
No 170
>PRK08589 short chain dehydrogenase; Validated
Probab=98.29 E-value=1.5e-05 Score=56.27 Aligned_cols=80 Identities=21% Similarity=0.277 Sum_probs=64.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|+++.- +++++|++ +++++.++++... ..+....++|+.|.+++.+++.+.
T Consensus 7 KvalVTGas~GIG~aiA~~la~~Ga---~Vv~~d~~-~~~~~~~~~i~~~-----g~~~~~~~~Dvsd~~~v~~~v~~~~ 77 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGA---YVLAVDIA-EAVSETVDKIKSN-----GGKAKAYHVDISDEQQVKDFASDIK 77 (272)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECC-HHHHHHHHHHHHC-----CCCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 9899978256999999999998699---99998382-7899999999955-----9948999960799999999999999
Q ss_pred ----CCCEEEECCCC
Q ss_conf ----97299973761
Q gi|254780742|r 81 ----NSQIIINVGSS 91 (419)
Q Consensus 81 ----~~dvVin~~~p 91 (419)
+.|++||.+|-
T Consensus 78 ~~~G~iDiLVNNAGi 92 (272)
T PRK08589 78 EQFGHIDVLFNNAGV 92 (272)
T ss_pred HHHCCCCEEEECCCC
T ss_conf 982998789989866
No 171
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.29 E-value=1.6e-05 Score=56.06 Aligned_cols=84 Identities=15% Similarity=0.230 Sum_probs=63.7
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||.|+ +++|+.+++.|+++.. ++++.+|+.++..+.+.++.... ..++...++|+.|.+++.++++..
T Consensus 6 K~~lITGgs~GIG~aia~~la~~G~---~Vii~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dlt~~~~v~~~~~~~~ 78 (248)
T PRK05557 6 KVALVTGASRGIGRAIAERLAAQGA---NVVLNYASSEAGAEALVAEIGAL----GGKALAVQGDVADAESIERAVDEAK 78 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHHHHHC----CCCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 8899948976899999999998799---89999698565899999999963----9958999903899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||++|...
T Consensus 79 ~~~g~iD~linnAg~~~ 95 (248)
T PRK05557 79 AEFGGVDILVNNAGITR 95 (248)
T ss_pred HHCCCCCEEEECCCCCC
T ss_conf 98299719998997799
No 172
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=98.28 E-value=1.1e-05 Score=57.19 Aligned_cols=73 Identities=32% Similarity=0.440 Sum_probs=57.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.|+|||+|+|.||+.++.+|.+... .+++|+.|+.++++++++.+.... +..-+++.+.+. .
T Consensus 181 ~~~vlvvGaGem~~l~~k~L~~~g~--~~i~v~nRt~~ra~~la~~~~~~~--------------~~~~~~l~~~l~--~ 242 (414)
T PRK13940 181 SKNVLIIGAGQTGELLFRHVTALAP--KQIMLANRTIEKAQKITSAFRNAS--------------AHYLSELPQLIK--K 242 (414)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--CEEEEECCCHHHHHHHHHHHCCCC--------------CCCHHHHHHHHH--H
T ss_conf 2838996686478999999997699--879994575677999999708885--------------016999999986--3
Q ss_pred CCEEEECCCCC
Q ss_conf 72999737610
Q gi|254780742|r 82 SQIIINVGSSF 92 (419)
Q Consensus 82 ~dvVin~~~p~ 92 (419)
+|+||+|.+..
T Consensus 243 aDivisaT~a~ 253 (414)
T PRK13940 243 ADIIIAAVNVL 253 (414)
T ss_pred CCEEEEECCCC
T ss_conf 88799816982
No 173
>PRK09135 pteridine reductase; Provisional
Probab=98.27 E-value=1.9e-05 Score=55.52 Aligned_cols=86 Identities=20% Similarity=0.303 Sum_probs=67.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 731999849-87799999999960898725999-6399999999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINI-ASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~v-a~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
.|.+||-|+ +++|+.+++.|+++.- ++++ +.++.++++++++++..... .+....+.|+.|.+++.+++++
T Consensus 6 gKvalVTGas~GIG~aia~~la~~Ga---~Vvi~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~Dv~~~~~v~~~~~~ 78 (249)
T PRK09135 6 SKVALITGGARRIGAAIARTLHAAGY---RVAVHYHRSAAEADALAAELNRLRP----GSAAALQADLLDPDALEQLVAA 78 (249)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHHHHHHCC----CCEEEEECCCCCHHHHHHHHHH
T ss_conf 98899968875899999999998799---8999818987999999999985059----8189998169999999999999
Q ss_pred C-----CCCEEEECCCCCCC
Q ss_conf 3-----97299973761003
Q gi|254780742|r 80 T-----NSQIIINVGSSFLN 94 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~~ 94 (419)
. +.|++||.++.+..
T Consensus 79 ~~~~~G~iDiLVNNAg~~~~ 98 (249)
T PRK09135 79 AVAAFGRLDALVNNASSFYP 98 (249)
T ss_pred HHHHCCCCCEEEECCCCCCC
T ss_conf 99983999899989988999
No 174
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase; InterPro: IPR005888 The conversion of dTDP-glucose into dTDP-4-keto-6-deoxyglucose by Escherichia coli dTDP-glucose 4,6-dehydratase) takes place in the active site in three steps: dehydrogenation to dTDP-4-ketoglucose, dehydration to dTDP-4-ketoglucose-5,6-ene, and rereduction of C6 to the methyl group. The 4,6-dehydratase makes use of tightly bound NAD^+ as the coenzyme for transiently oxidizing the substrate, activating it for the dehydration step . This and other 4,6-dehydratases catalyze the first committed step in all 6-deoxysugar biosynthetic pathways described to date. Numerous 6-deoxysugars are used in bacterial lipopolysaccharide production as well as in the biosynthesis of a diverse array of secondary metabolites.; GO: 0008460 dTDP-glucose 46-dehydratase activity, 0009225 nucleotide-sugar metabolic process.
Probab=98.27 E-value=4.7e-06 Score=59.66 Aligned_cols=81 Identities=11% Similarity=0.197 Sum_probs=60.7
Q ss_pred EEEEE-CCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 19998-49877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLII-GAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~-GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+|||- |||++|+.-++++.++.+. .+|++-|. |. .|....+.......+++.+++.|+.|.+.+..+++.+.+
T Consensus 1 ~~LVTGGaGFIGsnFvry~~~~~~D-~~v~vlDk----LT-YAgn~e~L~~l~~~pr~~Fv~GDI~D~~lv~~~~~e~~~ 74 (340)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPD-AEVIVLDK----LT-YAGNLENLADLEDNPRYRFVKGDIGDRELVDRLLKEHDP 74 (340)
T ss_pred CCEEECCCCHHHHHHHHHHHHHCCC-CEEEEEEC----CC-CCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 9236327852568999999974799-57998635----44-557865552332396615674230228899888400176
Q ss_pred CEEEECCC
Q ss_conf 29997376
Q gi|254780742|r 83 QIIINVGS 90 (419)
Q Consensus 83 dvVin~~~ 90 (419)
|.|||-|-
T Consensus 75 D~VvhFAA 82 (340)
T TIGR01181 75 DAVVHFAA 82 (340)
T ss_pred CEEEECCC
T ss_conf 77886222
No 175
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=98.27 E-value=2.7e-05 Score=54.56 Aligned_cols=103 Identities=16% Similarity=0.258 Sum_probs=74.6
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECC-------------------HHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 1999849877999999999608987259996399-------------------999999998734302455555730899
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRT-------------------LQKCSKIIDSIYKKKSLKIDGKLAIHQ 64 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~ 64 (419)
+|+|+|+|++|+.++.+|++.+- .++++.|.| ..|++.+++.+.+.++ ...++...
T Consensus 1 kVlivG~GglG~~va~~L~~~Gv--~~i~ivD~D~v~~~Nl~Rq~~~~~~dvG~~Ka~~a~~~l~~~np---~v~i~~~~ 75 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGV--GKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNP---GVNVTAVP 75 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHHCC--CCEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCC---CCEEEEEE
T ss_conf 99999979899999999999379--71999978987500146422589889492248999999985689---83899994
Q ss_pred ECCCCHHHHHHHHHHCCCCEEEECCCCCC-CHHHHHHHHHCCCCEEEECCC
Q ss_conf 43789899999997539729997376100-327899998628868960366
Q gi|254780742|r 65 VDALNIKAVVELIKKTNSQIIINVGSSFL-NMSVLRACIDSNVAYIDTAIH 114 (419)
Q Consensus 65 ~D~~d~~~l~~~~~~~~~dvVin~~~p~~-~~~v~~a~i~~g~hyvD~s~~ 114 (419)
.++.+ +...++++ ++|+||.|...+. ...+.++|.++++++++.+..
T Consensus 76 ~~~~~-~~~~~~~~--~~dvvi~~~D~~~~r~~l~~~~~~~~ip~i~~~~~ 123 (143)
T cd01483 76 EGISE-DNLDDFLD--GVDLVIDAIDNIAVRRALNRACKELGIPVIDAGGL 123 (143)
T ss_pred CCCCH-HHHHHHHC--CCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 56896-46999975--99999987799999999999999869988996366
No 176
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.27 E-value=2e-05 Score=55.34 Aligned_cols=83 Identities=23% Similarity=0.315 Sum_probs=66.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-87799999999960898725999-63999999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINI-ASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~v-a~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.++|.|+ +++|+.+++.|+++.- ++++ .+||.++++++++++.... .+..+.+.|+++.++..++++..
T Consensus 7 KvalITGga~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~~~~~~~~~ 78 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDGA---LVAIHYGRNKAAADETIREIESNG-----GKAFLIEADLNSIDGVKKLVEQL 78 (254)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHH
T ss_conf 8899948476899999999998799---999965999899999999998559-----92899975779999999999999
Q ss_pred -----------CCCEEEECCCCCC
Q ss_conf -----------9729997376100
Q gi|254780742|r 81 -----------NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----------~~dvVin~~~p~~ 93 (419)
+.|++||.++...
T Consensus 79 ~~~~~~~~g~g~iDiLVnnAg~~~ 102 (254)
T PRK12746 79 KNELQIRVGTSEIDILVNNAGIGT 102 (254)
T ss_pred HHHHHHHCCCCCCCEEEECCCCCC
T ss_conf 999866416898518997997889
No 177
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.26 E-value=2.3e-05 Score=54.95 Aligned_cols=85 Identities=18% Similarity=0.289 Sum_probs=66.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996-39999999999873430245555573089943789899999997
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIA-SRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
|.|.+||-|+ +++|+.+++.|++..- ++++. .++.+.++++.+.+.... .+....+.|+.|.+++.+++.
T Consensus 2 ~nKvalITGas~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~Dv~~~~~v~~~~~ 73 (249)
T PRK06123 2 MRKVMIITGASRGIGAATALLAAERGY---AVCLNYLRNRDAAEAVVQAIRRQG-----GEALAVAADVADEADVLRLFE 73 (249)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHH
T ss_conf 998899968687999999999998799---899980898789999999999649-----909999847999999999999
Q ss_pred HC-----CCCEEEECCCCCC
Q ss_conf 53-----9729997376100
Q gi|254780742|r 79 KT-----NSQIIINVGSSFL 93 (419)
Q Consensus 79 ~~-----~~dvVin~~~p~~ 93 (419)
.. +.|++||.+|.+.
T Consensus 74 ~~~~~~G~iDiLVnNAG~~~ 93 (249)
T PRK06123 74 AVDRELGRLDALVNNAGILE 93 (249)
T ss_pred HHHHHHCCCCEEEECCCCCC
T ss_conf 99998299878998885578
No 178
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.26 E-value=2e-05 Score=55.39 Aligned_cols=83 Identities=20% Similarity=0.294 Sum_probs=66.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 731999849-877999999999608987259996-399999999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIA-SRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
+|.+||-|+ +++|+.+++.|+++.- ++++. .|+.+.++++++.+.... .+....++|+.|.+++.++++.
T Consensus 6 ~KvalVTGa~~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~Dvs~~~~v~~~~~~ 77 (252)
T PRK06947 6 RKVVLITGASRGIGRATAVLAAARGW---SVGINYARDAAAAEETADAVRAAG-----GRACVVAGDVANEADVIAMFDA 77 (252)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHH
T ss_conf 90899938835899999999998799---899980898789999999999649-----9289998479999999999999
Q ss_pred C-----CCCEEEECCCCC
Q ss_conf 3-----972999737610
Q gi|254780742|r 80 T-----NSQIIINVGSSF 92 (419)
Q Consensus 80 ~-----~~dvVin~~~p~ 92 (419)
. +.|++||.+|..
T Consensus 78 ~~~~~G~iD~lVnNAG~~ 95 (252)
T PRK06947 78 VQAAFGRLDALVNNAGIV 95 (252)
T ss_pred HHHHHCCCCEEEECCCCC
T ss_conf 999849988999876435
No 179
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=98.26 E-value=1.2e-05 Score=56.90 Aligned_cols=126 Identities=19% Similarity=0.305 Sum_probs=86.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
+.+|+|+|+|++|+.++++|++.. + .++++.|.|.=....+.+++..... .+--...+.+++.+++.+
T Consensus 11 ~s~V~v~G~GGvGs~~a~~LarsG-V-G~l~lvD~D~v~~SNLnRQ~~a~~~----------~iG~~K~~~~~~rl~~iN 78 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSG-V-GKLTLIDFDVVCVSNLNRQIHALLS----------TVGKPKVEVMAERIRDIN 78 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCEECCCCHHHHHCCCHH----------HCCCCCHHHHHHHHHHHC
T ss_conf 497899888636899999999809-9-7599971999045444433016563----------369972899999999879
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEE-EECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHH
Q ss_conf 7299973761003278999986288689-6036642000014420000357751088885188699537501
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYI-DTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFD 152 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyv-D~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~ 152 (419)
+++-|.+..-|+...-+..-+....+|| |.++.... + ..+.+.+.+.+.++|..||..
T Consensus 79 P~~~v~~~~~~~~~~n~~~ll~~~~D~VvDaiD~~~~-----------K--~~l~~~c~~~~iplIss~Gag 137 (231)
T cd00755 79 PECEVDAVEEFLTPDNSEDLLGGDPDFVVDAIDSIRA-----------K--VALIAYCRKRKIPVISSMGAG 137 (231)
T ss_pred CCCEEEEEHHHCCHHHHHHHHCCCCCEEEECCCCHHH-----------H--HHHHHHHHHCCCEEEEECCCC
T ss_conf 9988998625159989999845477778534424877-----------9--999999998299089986734
No 180
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.26 E-value=5.6e-06 Score=59.15 Aligned_cols=81 Identities=12% Similarity=0.274 Sum_probs=57.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCCCEEEEEECCH--HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 973199984-98779999999996089872599963999--999999987343024555557308994378989999999
Q gi|254780742|r 1 MKKNVLIIG-AGGVAHVVAHKCAQNNDILGDINIASRTL--QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELI 77 (419)
Q Consensus 1 M~k~ilv~G-aG~vG~~~~~~L~~~~~~~~~i~va~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~ 77 (419)
||| |||.| +|++|+.+++.|.++... .+++.|... .....+ ......+++...+.|+.|.+.+.+++
T Consensus 1 MKk-ILVTGg~GFIGs~Lv~~Ll~~~~~--~v~~~d~~~~~~~~~~~-------~~~~~~~~~~~~~~Di~d~~~l~~~~ 70 (355)
T PRK10217 1 MRK-ILITGGAGFIGSALVRYIINETSD--AVVVVDKLTYAGNLMSL-------APVAQSERFAFEKVDICDRAELARVF 70 (355)
T ss_pred CCE-EEECCCCCHHHHHHHHHHHHCCCC--EEEEEECCCCCCCHHHH-------HHHHCCCCCEEEECCCCCHHHHHHHH
T ss_conf 996-999378757999999999976998--89998289876525444-------45412787169980058899999999
Q ss_pred HHCCCCEEEECCCC
Q ss_conf 75397299973761
Q gi|254780742|r 78 KKTNSQIIINVGSS 91 (419)
Q Consensus 78 ~~~~~dvVin~~~p 91 (419)
+++++|+|++++..
T Consensus 71 ~~~~pD~ViHlAa~ 84 (355)
T PRK10217 71 TEYQPDCVMHLAAE 84 (355)
T ss_pred HHCCCCEEEEECCC
T ss_conf 86199889994242
No 181
>KOG1205 consensus
Probab=98.25 E-value=1.3e-05 Score=56.73 Aligned_cols=86 Identities=22% Similarity=0.373 Sum_probs=70.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.|||-|| .|+|..+|+.|++.+- ++++..|..++++++++++.+..+.. ++.+.++|+.|.++..+.+...
T Consensus 12 ~kvVvITGASsGIG~~lA~~la~~G~---~l~lvar~~rrl~~v~~~l~~~~~~~---~v~~~~~Dvs~~~~~~~~~~~~ 85 (282)
T KOG1205 12 GKVVLITGASSGIGEALAYELAKRGA---KLVLVARRARRLERVAEELRKLGSLE---KVLVLQLDVSDEESVKKFVEWA 85 (282)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---CEEEEEHHHHHHHHHHHHHHHHCCCC---CCEEEECCCCCHHHHHHHHHHH
T ss_conf 98899957871788999999986777---34774243202899999999747867---6479967658878899999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||-+|-..
T Consensus 86 ~~~fg~vDvLVNNAG~~~ 103 (282)
T KOG1205 86 IRHFGRVDVLVNNAGISL 103 (282)
T ss_pred HHHCCCCCEEEECCCCCC
T ss_conf 986588888984686565
No 182
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.25 E-value=3.3e-05 Score=53.97 Aligned_cols=102 Identities=17% Similarity=0.189 Sum_probs=67.8
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 1999849-877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+|||.|+ |++|+.+++.|.+... ++++.|+-...-+.....+... ....++..+.|+.|.+.+.+++.+.++
T Consensus 2 kvLVTGg~GFIGs~l~~~Ll~~g~---~V~~~d~~~~~~~~~~~~~~~~----~~~~~~~~~~Di~d~~~~~~~~~~~~~ 74 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGH---DVVILDNLCNSKRSVLPVIERL----GGKHPTFVEGDIRNEALMTEILHDHAI 74 (338)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCCHHHHHHHHHH----CCCCCEEEECCCCCHHHHHHHHHHCCC
T ss_conf 199989876799999999997849---8999988988737678888861----478875998327998999999986599
Q ss_pred CEEEECCCCCC-----C-------------HHHHHHHHHCCCC-EEEEC
Q ss_conf 29997376100-----3-------------2789999862886-89603
Q gi|254780742|r 83 QIIINVGSSFL-----N-------------MSVLRACIDSNVA-YIDTA 112 (419)
Q Consensus 83 dvVin~~~p~~-----~-------------~~v~~a~i~~g~h-yvD~s 112 (419)
|+|+++++... . ..++++|.++|+. +|=+|
T Consensus 75 d~V~HlAa~~~~~~~~~~p~~~~~~Nv~gt~nllea~~~~~vkr~v~~S 123 (338)
T PRK10675 75 DTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSS 123 (338)
T ss_pred CEEEECCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 9999898654546211098999886898899999999973988799963
No 183
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.25 E-value=1.4e-05 Score=56.35 Aligned_cols=78 Identities=15% Similarity=0.234 Sum_probs=62.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
||+|||.|+ .++|..+++.|+++.. ++++.+|+.++++.+.+ + +.....++|+.|.+++.++++..
T Consensus 1 KK~~lITGas~GIG~aia~~l~~~G~---~V~~~~R~~~~~~~~~~-~---------~~~~~~~~D~~~~~~i~~~~~~~ 67 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGW---QVTATVRGPQQDTALQA-L---------PGVHIERLDMNDPASLDQLLQRL 67 (225)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHH-C---------CCCCEEEEECCCHHHHHHHHHHH
T ss_conf 99899927342999999999998869---99999798877899872-5---------48728998458889999999996
Q ss_pred ---CCCEEEECCCCC
Q ss_conf ---972999737610
Q gi|254780742|r 81 ---NSQIIINVGSSF 92 (419)
Q Consensus 81 ---~~dvVin~~~p~ 92 (419)
..|++||.+|-+
T Consensus 68 ~~~~iDvlinNAGi~ 82 (225)
T PRK08177 68 QGQRFDLLFVNAGIS 82 (225)
T ss_pred HCCCCCEEEECCCCC
T ss_conf 067788899878436
No 184
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.25 E-value=2.1e-05 Score=55.27 Aligned_cols=81 Identities=19% Similarity=0.269 Sum_probs=66.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECC-HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-877999999999608987259996399-9999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRT-LQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.+||-|+ .++|+.+++.|+++.- ++++.+|+ .++++++++++... ..+....++|+.|++++.++++..
T Consensus 7 KvalVTGas~GIG~aiA~~la~~Ga---~Vvi~~~~~~~~a~~~~~~i~~~-----g~~a~~~~~Dvtd~~~v~~l~~~~ 78 (248)
T PRK07806 7 KIALVTGSSRGIGAEVAKYLAGAGA---HVVVNYRNKAARAEKVVAEIRAA-----GGRASAVGADLTDEASVAALMDAI 78 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHHHHHC-----CCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 8899937885999999999998799---89998389568999999999961-----983999978999999999999999
Q ss_pred -----CCCEEEECCCC
Q ss_conf -----97299973761
Q gi|254780742|r 81 -----NSQIIINVGSS 91 (419)
Q Consensus 81 -----~~dvVin~~~p 91 (419)
+.|++||-++.
T Consensus 79 ~~~~G~iDiLVnNAg~ 94 (248)
T PRK07806 79 RAEFGGLDALVLNASG 94 (248)
T ss_pred HHHCCCCCEEEECCCC
T ss_conf 9984999899989999
No 185
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.24 E-value=2.7e-05 Score=54.52 Aligned_cols=84 Identities=14% Similarity=0.164 Sum_probs=65.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEEC-CHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 731999849-87799999999960898725999639-9999999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASR-TLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
-|.+||-|+ +++|+.++..|+++.- ++++.|| +.+.+++.++.+... ..+....+.|+.|.+++.+++++
T Consensus 16 gKvalVTGa~~GIG~aiA~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dvt~~~~v~~~v~~ 87 (262)
T PRK06114 16 GQVAFVTGAGSGIGQRIAIGLAQAGA---DVALFDLRTDDGLAETAEHIEAA-----GRRAIQIAADVTSKSDLAAAVAR 87 (262)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHH
T ss_conf 99899968478999999999998799---89999589746999999999965-----99589998168999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||.+|-..
T Consensus 88 ~~~~~G~iDiLVNnAGi~~ 106 (262)
T PRK06114 88 TEAELGALTLAVNAAGIAN 106 (262)
T ss_pred HHHHCCCCCEEEECCCCCC
T ss_conf 9998199989998998999
No 186
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.24 E-value=3.2e-05 Score=54.02 Aligned_cols=83 Identities=24% Similarity=0.294 Sum_probs=62.7
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHH-------HHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHH
Q ss_conf 31999849-8779999999996089872599963999999-------999987343024555557308994378989999
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKC-------SKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVV 74 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~ 74 (419)
|.+||-|+ +++|+.+++.|+++.- ++++++|+.+.. +++++++... ..+....++|+.|++++.
T Consensus 7 KvalVTGas~GIG~aiA~~la~~Ga---~Vvi~~r~~~~~~~l~~~~~~~a~e~~~~-----g~~~~~~~~Dv~~~~~v~ 78 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGA---NIVIAAKTAEPHPKLPGTIHTAAAEIEAA-----GGQALPLVGDVRDEDQVA 78 (273)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCCCCHHHHH
T ss_conf 9899948765999999999998799---89999677222133454899999999974-----990899971179999999
Q ss_pred HHHHHC-----CCCEEEECCCCCC
Q ss_conf 999753-----9729997376100
Q gi|254780742|r 75 ELIKKT-----NSQIIINVGSSFL 93 (419)
Q Consensus 75 ~~~~~~-----~~dvVin~~~p~~ 93 (419)
++++.. +.|++||.+|...
T Consensus 79 ~~v~~~~~~~G~iDiLVNNAG~~~ 102 (273)
T PRK08278 79 AAVAKTVERFGGIDICVNNASAIN 102 (273)
T ss_pred HHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 999999998599629998786666
No 187
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.24 E-value=1.1e-05 Score=57.06 Aligned_cols=87 Identities=17% Similarity=0.220 Sum_probs=64.8
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++..- ++++.||+.++.++.++++..... ....++...++|+.|.+++.+++++.
T Consensus 7 KvalVTGas~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dv~~~~~v~~~v~~~~ 82 (251)
T PRK12827 7 RRVLITGGSGGLGRAIAVRLAADGA---DVIVLDIHPMRGRAEAEAVAALIE-AAGGKALGLAFDVRDFAATRAALDAGV 82 (251)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCCHHHHHHHHHHHH-HCCCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 8899968255899999999998799---899984888532899999999999-649849999903899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 83 ~~~G~iDiLVNnAG~~~ 99 (251)
T PRK12827 83 EEFGRLDILVNNAGIAT 99 (251)
T ss_pred HHCCCCCEEEECCCCCC
T ss_conf 98399979998998899
No 188
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.24 E-value=1.1e-05 Score=57.03 Aligned_cols=76 Identities=20% Similarity=0.274 Sum_probs=61.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
+|.+||-|| +|+|+.+++.|+++. .++++.+|+.++++.+ .+++..++|+.|.+++.++++..
T Consensus 4 ~KvalITGassGIG~a~A~~la~~G---~~V~~~~r~~~~~~~~-------------~~~~~~~~Dvtd~~~v~~~~~~~ 67 (270)
T PRK06179 4 KKVALVTGASSGIGRATAEALARAG---YRVFGTSRNPARATPI-------------PGVELLELDVTDDASVQAAVQEV 67 (270)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHCC-------------CCCEEEEEECCCHHHHHHHHHHH
T ss_conf 9589990724699999999999879---9999996897773054-------------89789991079999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 68 ~~~~g~iDiLVNNAGi~~ 85 (270)
T PRK06179 68 IARAGRIDVLVNNAGVGL 85 (270)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998399888998986667
No 189
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.23 E-value=2.7e-05 Score=54.54 Aligned_cols=83 Identities=14% Similarity=0.177 Sum_probs=65.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEEC-CHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 731999849-87799999999960898725999639-9999999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASR-TLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
+|.+||-|+ +++|+.+++.|++..- ++++.+| +.++++.+++++... ..++...+.|+.|.+++.++++.
T Consensus 5 ~KValVTGgs~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dv~~~~~~~~~~~~ 76 (259)
T PRK12745 5 RPVALVTGGRRGIGLGIALALAAGGF---DLAINDRPDAEKLAATQQELRAL-----GVEVIFFPADVADLSAHEATLDA 76 (259)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHH
T ss_conf 99999968678999999999998799---89999798667899999999844-----99489998468999999999999
Q ss_pred C-----CCCEEEECCCCC
Q ss_conf 3-----972999737610
Q gi|254780742|r 80 T-----NSQIIINVGSSF 92 (419)
Q Consensus 80 ~-----~~dvVin~~~p~ 92 (419)
. +.|++||.+|..
T Consensus 77 ~~~~fg~iDiLVNNAG~~ 94 (259)
T PRK12745 77 AQDAWGRIDCLVNNAGVG 94 (259)
T ss_pred HHHHHCCCCEEEECCCCC
T ss_conf 999829988999847536
No 190
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.23 E-value=2.6e-05 Score=54.65 Aligned_cols=83 Identities=14% Similarity=0.284 Sum_probs=66.7
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-877999999999608987259996-3999999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIA-SRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.+||-|+ +++|+.+++.|++..- ++++. +++.+.++++++++... ..++...++|+.|.+++.++++..
T Consensus 7 KvalVTG~s~GIG~aiA~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dvs~~~~~~~~v~~~ 78 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGA---KVVINYNSSKEAAENLVNELGKE-----GHDVYAVQADVSKVEDANRLVEEA 78 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 9899917276899999999998799---89997699989999999999843-----995899985799999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 79 ~~~~G~iDiLVNNAGi~~ 96 (247)
T PRK12935 79 VNHFGKVDILVNNAGITR 96 (247)
T ss_pred HHHCCCCCEEEECCCCCC
T ss_conf 998399989998998899
No 191
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.22 E-value=1.8e-05 Score=55.75 Aligned_cols=79 Identities=9% Similarity=0.224 Sum_probs=56.4
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECC--HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 1999849-877999999999608987259996399--9999999987343024555557308994378989999999753
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRT--LQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
+|||.|+ |++|+.+++.|.++... .++..|+- ..+.+.+.. ....+++...++|+.|.+.+.++++.+
T Consensus 2 kILVTGg~GFIGs~l~~~Ll~~~~~--~v~~vd~~~~~~~~~~~~~-------~~~~~~~~~~~~Di~d~~~l~~~~~~~ 72 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQD--SVVNVDKLTYAGNLESLAD-------VSDSERYVFEHADICDRAELDRIFAQH 72 (352)
T ss_pred EEEEECCHHHHHHHHHHHHHHCCCC--EEEEEECCCCCCCHHHHHH-------HHCCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 7999751008999999999977998--8999847987677888887-------630897179985678999999999973
Q ss_pred CCCEEEECCCC
Q ss_conf 97299973761
Q gi|254780742|r 81 NSQIIINVGSS 91 (419)
Q Consensus 81 ~~dvVin~~~p 91 (419)
++|+||+++..
T Consensus 73 ~~D~ViHlAA~ 83 (352)
T PRK10084 73 QPDAVMHLAAE 83 (352)
T ss_pred CCCEEEECCCC
T ss_conf 99999997734
No 192
>pfam03446 NAD_binding_2 NAD binding domain of 6-phosphogluconate dehydrogenase. The NAD binding domain of 6-phosphogluconate dehydrogenase adopts a Rossmann fold.
Probab=98.22 E-value=1.5e-05 Score=56.22 Aligned_cols=119 Identities=17% Similarity=0.176 Sum_probs=82.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
++|-++|.|.||+.+++.|.+.. .++.+.||+.++++++.+. .... +. ++.++++ ++
T Consensus 2 ~~Ig~IGlG~MG~~ma~~L~~~g---~~v~v~d~~~~~~~~~~~~-----------g~~~----~~---s~~e~~~--~~ 58 (163)
T pfam03446 2 AKIGFIGLGVMGSPMALNLLKAG---YTVTVYNRTPEKVEELVAE-----------GAVA----AA---SPAEAAA--SA 58 (163)
T ss_pred CEEEEEEEHHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHC-----------CCEE----CC---CHHHHHH--CC
T ss_conf 88999836798999999999779---9699997978877999983-----------9955----39---9999986--19
Q ss_pred CEEEECCCCCCC-HHHH------HHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHH
Q ss_conf 299973761003-2789------999862886896036642000014420000357751088885188699537501114
Q gi|254780742|r 83 QIIINVGSSFLN-MSVL------RACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGV 155 (419)
Q Consensus 83 dvVin~~~p~~~-~~v~------~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl 155 (419)
|+|+.|++.... ..|+ ...+..|.-+||.+-..+.. ..++++++++.|+. ..+|.+..|+
T Consensus 59 dvIi~~l~~~~~v~~V~~~~~gl~~~~~~g~iiid~sT~~p~~------------~~~~~~~~~~~g~~-~lDaPVsGg~ 125 (163)
T pfam03446 59 DVVITMVPAGAAVDAVIFGEDGLLPGLKPGDIIIDGSTISPDD------------TRRLAKELKEKGIR-FLDAPVSGGE 125 (163)
T ss_pred CEEEEECCCHHHHHEEECCCCCHHHHCCCCCEEEECCCCCHHH------------HHHHHHHHHHCCCC-CCCCCCCCCH
T ss_conf 9999925871454022026313323135898898679899999------------99999987530344-3478776898
Q ss_pred HH
Q ss_conf 88
Q gi|254780742|r 156 VN 157 (419)
Q Consensus 156 ~~ 157 (419)
..
T Consensus 126 ~~ 127 (163)
T pfam03446 126 EG 127 (163)
T ss_pred HH
T ss_conf 99
No 193
>pfam00106 adh_short short chain dehydrogenase. This family contains a wide variety of dehydrogenases.
Probab=98.21 E-value=3.3e-05 Score=53.94 Aligned_cols=84 Identities=15% Similarity=0.246 Sum_probs=64.4
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECC--HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 31999849-877999999999608987259996399--999999998734302455555730899437898999999975
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRT--LQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.+||.|+ +++|+.+++.|+++... .+++.+|+ .++++++.+++... ..++.+.++|+.|++++.++++.
T Consensus 1 ~T~lITGas~GIG~aia~~la~~Ga~--~vv~~~r~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~ 73 (167)
T pfam00106 1 GTVLITGGTGGLGLALARWLAAEGAR--HLVLVSRRGDAPGAAELVAELEAL-----GAEVTVAACDVADRDALAALLAA 73 (167)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCC--EEEEECCCCCHHHHHHHHHHHHHC-----CCEEEEEECCCCCHHHHHHHHHH
T ss_conf 98999897878999999999987994--899965996768999999999955-----98599998469999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||++|-..
T Consensus 74 ~~~~~g~iD~linnAG~~~ 92 (167)
T pfam00106 74 LPAALGPLDGVVHNAGVLD 92 (167)
T ss_pred HHHHCCCCCEEEECCCCCC
T ss_conf 9997599739998871268
No 194
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.19 E-value=2.9e-05 Score=54.34 Aligned_cols=83 Identities=22% Similarity=0.283 Sum_probs=65.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-877999999999608987259996-3999999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIA-SRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|++||.|+ +++|+.+++.|++..- ++++. +++.+.++++++++.+... .+....++|+.|.+++.++++..
T Consensus 9 K~alVTGgs~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~l~~~~g----~~~~~~~~Dv~~~~~~~~~~~~i 81 (260)
T PRK08416 9 KTLVISGGTRGIGKAIVYEFAQSGV---NIAFTYNSNVEEADKIAQDLEKKYG----IKARAYPLNILEPETYKELFKKI 81 (260)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEECCCCCHHHHHHHHHHH
T ss_conf 9899967340999999999998799---9999859988999999999988419----83699977889999999999999
Q ss_pred -----CCCEEEECCCCC
Q ss_conf -----972999737610
Q gi|254780742|r 81 -----NSQIIINVGSSF 92 (419)
Q Consensus 81 -----~~dvVin~~~p~ 92 (419)
+.|++||.++-.
T Consensus 82 ~~~~g~iDilVnnA~i~ 98 (260)
T PRK08416 82 DADFDRVDFFISNAIIS 98 (260)
T ss_pred HHHHCCCCEEEECCEEC
T ss_conf 99819978998643422
No 195
>pfam02719 Polysacc_synt_2 Polysaccharide biosynthesis protein. This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI).
Probab=98.19 E-value=2.1e-05 Score=55.19 Aligned_cols=82 Identities=17% Similarity=0.196 Sum_probs=64.6
Q ss_pred EEEEC-CCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 99984-98779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 5 VLIIG-AGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 5 ilv~G-aG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
|||-| ||.+|+..+..|.+.... .+++-|++...+..+...+... ...++++....|+.|.+.+.++++.+++|
T Consensus 1 ILVTGGaGFIGS~Lv~~Ll~~g~~--~v~v~d~~~~~~~~~~~~l~~~---~~~~~~~~~~~DI~D~~~l~~~~~~~~~D 75 (280)
T pfam02719 1 VLVTGGGGSIGSELCRQILKFNPK--KIILFSRDEFKLYEIEQELREE---YNDPKLRFFIGDVRDRERLERAMEEYGVD 75 (280)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCC--EEEEEECCCCCHHHHHHHHHHH---CCCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 799748867999999999968998--8999908874277899998862---67898389981168989999998754999
Q ss_pred EEEECCCC
Q ss_conf 99973761
Q gi|254780742|r 84 IIINVGSS 91 (419)
Q Consensus 84 vVin~~~p 91 (419)
.|++++..
T Consensus 76 ~V~HlAA~ 83 (280)
T pfam02719 76 TVFHAAAL 83 (280)
T ss_pred EEEECHHH
T ss_conf 99981031
No 196
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=98.19 E-value=7e-05 Score=51.71 Aligned_cols=99 Identities=15% Similarity=0.255 Sum_probs=75.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH-HHHHHCCCCCCCCCEEEEECCCCHHHHHHH-HHHC
Q ss_conf 31999849877999999999608987259996399999999998-734302455555730899437898999999-9753
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIID-SIYKKKSLKIDGKLAIHQVDALNIKAVVEL-IKKT 80 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~ 80 (419)
++++|+|+|.+|+.+|+.|++... .+++-++|.+++++... ++ ...+.+.|..|.+.|+++ +.
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~g~---~Vv~Id~d~~~~~~~~~~~~----------~~~~v~gd~t~~~~L~~agi~-- 65 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEEGH---NVVLIDRDEERVEEFLADEL----------DTHVVIGDATDEDVLEEAGID-- 65 (225)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCC----------CEEEEEECCCCHHHHHHCCCC--
T ss_conf 989998985788999999987899---08999768899998632000----------449999268898999867986--
Q ss_pred CCCEEEECCCCC-CCHHHHHHH-HHCCCCEEEECCCCC
Q ss_conf 972999737610-032789999-862886896036642
Q gi|254780742|r 81 NSQIIINVGSSF-LNMSVLRAC-IDSNVAYIDTAIHES 116 (419)
Q Consensus 81 ~~dvVin~~~p~-~~~~v~~a~-i~~g~hyvD~s~~~~ 116 (419)
++|++|-+.+-. .+.-+...+ -+.|++++-.--..+
T Consensus 66 ~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~~~ 103 (225)
T COG0569 66 DADAVVAATGNDEVNSVLALLALKEFGVPRVIARARNP 103 (225)
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 38999998088679999999999873998499995694
No 197
>pfam01370 Epimerase NAD dependent epimerase/dehydratase family. This family of proteins utilize NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions.
Probab=98.19 E-value=4e-05 Score=53.37 Aligned_cols=75 Identities=15% Similarity=0.233 Sum_probs=57.6
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 999849-8779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 5 VLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 5 ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
|||.|+ |.+|+.++.+|.++.. +++.-+|+....... ......+....|+.|.+.+.+++++.++|
T Consensus 1 ILItGasGfiG~~l~~~L~~~g~---~v~~~~r~~~~~~~~----------~~~~~~~~~~~dl~~~~~~~~~~~~~~~D 67 (235)
T pfam01370 1 ILVTGGTGFIGSALVRRLLQEGY---EVIVLGRRRRSESLN----------TGRIRFRFHEGDLTDPDALERLLAEVQPD 67 (235)
T ss_pred EEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCHHHHH----------HCCCCCEEEEEECCCHHHHHHHHHHCCCC
T ss_conf 79972897999999999997879---899998997301222----------11467659996588999999998538998
Q ss_pred EEEECCCCC
Q ss_conf 999737610
Q gi|254780742|r 84 IIINVGSSF 92 (419)
Q Consensus 84 vVin~~~p~ 92 (419)
+||++++..
T Consensus 68 ~VihlAa~~ 76 (235)
T pfam01370 68 AVIHLAAQS 76 (235)
T ss_pred EEEECCCCC
T ss_conf 999897747
No 198
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.19 E-value=1.4e-05 Score=56.34 Aligned_cols=102 Identities=19% Similarity=0.227 Sum_probs=76.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|+|||-|+ |.+|+..++.|.++.+. ..+++-+|+..+...+.+.++ .++++....|+.|.+.+.++++
T Consensus 4 ~K~ILVTGGaGfIGS~lv~~Ll~~~~~-~~iii~~~de~~~~~l~~~~~-------~~~i~f~~gDIrD~~~l~~~~~-- 73 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNP-KKIIIYSRDELKQWEMQQKFP-------APCLRFFIGDVRDKERLTRALR-- 73 (324)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCC-CEEEEECCCCCCHHHHHHHCC-------CCCEEEEECCCCCHHHHHHHHC--
T ss_conf 399999079779999999999972998-289996686403288985168-------9875999677778899997634--
Q ss_pred CCCEEEECCCCCC------C------------HHHHHHHHHCCCC-EEEECC
Q ss_conf 9729997376100------3------------2789999862886-896036
Q gi|254780742|r 81 NSQIIINVGSSFL------N------------MSVLRACIDSNVA-YIDTAI 113 (419)
Q Consensus 81 ~~dvVin~~~p~~------~------------~~v~~a~i~~g~h-yvD~s~ 113 (419)
++|+|+++|-..+ + ..++++|.++|+. +|=+|-
T Consensus 74 ~vD~VfHaAA~khVp~se~nP~e~i~tNV~Gt~nlleaa~~~~Vkk~V~iST 125 (324)
T TIGR03589 74 GVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALST 125 (324)
T ss_pred CCCEEEECCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 8889999462776726776989999999799999999988555431786226
No 199
>KOG1208 consensus
Probab=98.18 E-value=3.2e-05 Score=53.98 Aligned_cols=87 Identities=22% Similarity=0.300 Sum_probs=72.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
+.++|.|+ .++|..+++.|+.+. .+++++.||.+++++.++++.. ......+...++|..+.++++++....
T Consensus 36 ~~~vVTGansGIG~eta~~La~~G---a~Vv~~~R~~~~~~~~~~~i~~---~~~~~~i~~~~lDLssl~SV~~fa~~~~ 109 (314)
T KOG1208 36 KVALVTGATSGIGFETARELALRG---AHVVLACRNEERGEEAKEQIQK---GKANQKIRVIQLDLSSLKSVRKFAEEFK 109 (314)
T ss_pred CEEEEECCCCCHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHH---CCCCCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 779995898843799999999579---9899984777889999999971---0877636999879999999999999998
Q ss_pred ----CCCEEEECCCCCCCH
Q ss_conf ----972999737610032
Q gi|254780742|r 81 ----NSQIIINVGSSFLNM 95 (419)
Q Consensus 81 ----~~dvVin~~~p~~~~ 95 (419)
+-|+.||-+|=++..
T Consensus 110 ~~~~~ldvLInNAGV~~~~ 128 (314)
T KOG1208 110 KKEGPLDVLINNAGVMAPP 128 (314)
T ss_pred HCCCCCCEEEECCCCCCCC
T ss_conf 5178765898655223676
No 200
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.18 E-value=2.4e-05 Score=54.80 Aligned_cols=75 Identities=17% Similarity=0.275 Sum_probs=61.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||.|+ +++|+.+++.|++..- ++++.||+.+++.+ ..++....+|+.|.+++.+++++.
T Consensus 9 K~alITG~s~GIG~aia~~la~~Ga---~V~~~~r~~~~l~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~ 72 (253)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEAGA---KVIGFDQAFEQLNE-------------QYPFATFVLDVADAAAVAQVCQRLL 72 (253)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHC-------------CCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 9899958856899999999998799---99999788778748-------------9977999973799999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||++|...
T Consensus 73 ~~~g~iDilVnnAG~~~ 89 (253)
T PRK08220 73 AETGPLDVLVNVAGVLR 89 (253)
T ss_pred HHCCCCCEEEECCCCCC
T ss_conf 97399888998998789
No 201
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.17 E-value=1.9e-05 Score=55.50 Aligned_cols=83 Identities=20% Similarity=0.233 Sum_probs=61.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHH----HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 31999849-877999999999608987259996399999----9999987343024555557308994378989999999
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQK----CSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELI 77 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~ 77 (419)
|.+||-|+ +++|+.+++.|+++.- ++++.+|+.++ ++++.+.+... ..+....++|+.|.+++.+++
T Consensus 9 KvalVTGgs~GIG~aiA~~la~~Ga---~vv~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~ 80 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQGA---KAVAIHYNSAATKADAEETVAAVKAA-----GAKAVAFQADLTTAAAVEKLF 80 (257)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHH
T ss_conf 9899928875899999999998799---89999378743689999999999973-----992899976889999999999
Q ss_pred HHC-----CCCEEEECCCCCC
Q ss_conf 753-----9729997376100
Q gi|254780742|r 78 KKT-----NSQIIINVGSSFL 93 (419)
Q Consensus 78 ~~~-----~~dvVin~~~p~~ 93 (419)
... +.|++||.+|...
T Consensus 81 ~~~~~~~G~iDilVnnAG~~~ 101 (257)
T PRK12744 81 DDAKAAFGRPDIAINTVGKVL 101 (257)
T ss_pred HHHHHHCCCCCEEEECCCCCC
T ss_conf 999998099889997664456
No 202
>pfam08659 KR KR domain. This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.16 E-value=2.1e-05 Score=55.22 Aligned_cols=87 Identities=15% Similarity=0.198 Sum_probs=64.8
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC--
Q ss_conf 1999849-8779999999996089872599963999999999987343024555557308994378989999999753--
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT-- 80 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-- 80 (419)
.|||.|+ +++|+.+++.|+++.. ..+++.+|+.++.++..+.+..... ...++...++|+.|++++.+++.+.
T Consensus 2 tvlITGas~GIG~aia~~la~~Ga--~~vvl~~r~~~~~~~~~~~~~~l~~--~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 77 (181)
T pfam08659 2 TYLVTGGLGGLGLELARWLAERGA--RHLVLLSRSGAPDPEAEALLAELEA--RGAEVTVVACDVSDRDAVAALLAEIRA 77 (181)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--CEEEEEECCCCCCHHHHHHHHHHHH--CCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 899968787899999999998799--7899986897662999999999996--599699997568999999988865798
Q ss_pred ---CCCEEEECCCCCCC
Q ss_conf ---97299973761003
Q gi|254780742|r 81 ---NSQIIINVGSSFLN 94 (419)
Q Consensus 81 ---~~dvVin~~~p~~~ 94 (419)
..|++||++|-...
T Consensus 78 ~~g~id~lvnnAG~~~~ 94 (181)
T pfam08659 78 DGPPLRGVIHAAGVLRD 94 (181)
T ss_pred HCCCEEEEEEECCCCCC
T ss_conf 73984899954466788
No 203
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=98.16 E-value=1.3e-05 Score=56.59 Aligned_cols=151 Identities=11% Similarity=0.032 Sum_probs=94.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|+.+|.|+|+ |.+|....+.|+.|++. ++.++.-+..+-+.+.+.+++..... .......|.+.+ ..
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~v--e~~~~ss~~~~g~~~~~~~p~l~g~~------~l~~~~~~~~~~---~~- 68 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDV--ELILISSRERAGKPVSDVHPNLRGLV------DLPFQTIDPEKI---EL- 68 (349)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCE--EEEEEECHHHCCCCHHHHCCCCCCCC------CCCCCCCCHHHH---HC-
T ss_conf 9815999778877489999998659973--79996316645870687582423534------554335774553---01-
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHC----------CCC----CCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 39729997376100327899998628868960366420000----------144----2000035775108888518869
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKI----------CES----PPWYNNYEWSLLDECRTKSITA 145 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~----------~~~----~~~~~~~~~~l~~~a~~ag~~~ 145 (419)
.+||+|+.|+|.-....++...++.|+..+|+|.+...... ... ..|.+..-.-..++-+++...+
T Consensus 69 ~~~DvvFlalPhg~s~~~v~~l~~~g~~VIDLSadfR~~d~~~ye~~Yg~~h~~~~~l~~avYGLpEl~~e~i~~A~lIA 148 (349)
T COG0002 69 DECDVVFLALPHGVSAELVPELLEAGCKVIDLSADFRLKDPEVYEKWYGFTHAGPELLEDAVYGLPELHREKIRGAKLIA 148 (349)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHCCCEEE
T ss_conf 56888999068636889899997479949988732005777777886277777801331543347312988883387736
Q ss_pred EECCCHHHHHHHHHHHHHHH
Q ss_conf 95375011148899999999
Q gi|254780742|r 146 ILGAGFDPGVVNAFARLAQD 165 (419)
Q Consensus 146 i~~~G~~PGl~~lla~~~~~ 165 (419)
.|||= |=-+-+..+=+.+
T Consensus 149 nPGCy--pTa~iLal~PL~~ 166 (349)
T COG0002 149 NPGCY--PTAAILALAPLVK 166 (349)
T ss_pred CCCCH--HHHHHHHHHHHHH
T ss_conf 79832--8899998889987
No 204
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.16 E-value=4.9e-05 Score=52.79 Aligned_cols=83 Identities=22% Similarity=0.282 Sum_probs=65.7
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEEC-CHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-87799999999960898725999639-99999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASR-TLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.+||-|+ +++|+.+++.|++..- ++++.+| +.+.++++++.+.+. ..+....++|+.|.+++.++++..
T Consensus 8 KvalVTGa~~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~v~~~ 79 (261)
T PRK08936 8 KVVVITGGSTGLGRAMAVRFGKEKA---KVVINYRSDESEANDVAEEIKKV-----GGEAIAVKGDVTVESDVVNLIQSA 79 (261)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 9899968477899999999998799---99997289878999999999965-----993899982799999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.++-..
T Consensus 80 ~~~~G~iDiLVNNAg~~~ 97 (261)
T PRK08936 80 VKEFGTLDVMINNAGIEN 97 (261)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998299889998997899
No 205
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=98.15 E-value=2.4e-05 Score=54.86 Aligned_cols=123 Identities=17% Similarity=0.137 Sum_probs=81.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|+++|-|+|| |.+|...++.|+.|++. .-+.+..... .|...-.+++.
T Consensus 1 M~~kV~I~GasGytG~EL~rlL~~Hp~v-el~~i~~~~~-----------------------------k~~~~~~~~~~- 49 (314)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRSDI-ELLSIPEAKR-----------------------------KDPAARRELLN- 49 (314)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCE-EEEEECCCCC-----------------------------CCHHHHHHHHH-
T ss_conf 9826999899885699999999759982-9999671125-----------------------------57556787750-
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHH---HHHHHHCCCEEEECCCHHHHHH
Q ss_conf 3972999737610032789999862886896036642000014420000357751---0888851886995375011148
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSL---LDECRTKSITAILGAGFDPGVV 156 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l---~~~a~~ag~~~i~~~G~~PGl~ 156 (419)
.+|+|.-|+|.-.....+....+.|+..||+|.+... .+.|.+..-.-+ .++-+.+...+.|||=-...+-
T Consensus 50 -~~DvvFlalPh~~s~~~v~~~~~~g~kVIDLSaDfRl-----~~~wvYGlPEl~~~~r~~I~~a~~IAnPGCyaTa~iL 123 (314)
T PRK11863 50 -AADIAILCLPDDAAREAVALIDNPATRVIDASTAHRT-----APGWVYGFPELAPGQRERIAAARRVANPGCYPTGAIA 123 (314)
T ss_pred -CCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCC-----CCCCEEECCCCCHHHHHHHHHCCEEECCCCHHHHHHH
T ss_conf -6999999999778999999886279889989854457-----9997733650687789998629863279828999999
Q ss_pred HHHH
Q ss_conf 8999
Q gi|254780742|r 157 NAFA 160 (419)
Q Consensus 157 ~lla 160 (419)
.+..
T Consensus 124 ~L~P 127 (314)
T PRK11863 124 LLRP 127 (314)
T ss_pred HHHH
T ss_conf 9999
No 206
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.14 E-value=5.1e-05 Score=52.67 Aligned_cols=85 Identities=20% Similarity=0.300 Sum_probs=60.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHH--HHHHH--
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989--99999--
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIK--AVVEL-- 76 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~--~l~~~-- 76 (419)
.|.+||.|+ +++|+.+++.|+++.- ++++.+|+.++++++++++..... +......+|+.+.+ ++.++
T Consensus 6 gK~~lITGas~GIG~aiA~~la~~Ga---~V~l~~r~~~~l~~~~~~l~~~~~----~~~~~~~~d~~~~~~~~~~~~~~ 78 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGA---TVILVARHQKKLEKVYDAIVEAGH----PEPFAIRFDLMSAEEKEFEQFAA 78 (239)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCCC----CCEEEEEEECCCCHHHHHHHHHH
T ss_conf 69899948862899999999998799---899997988899999999997379----95499998505630789999999
Q ss_pred -HH-H--CCCCEEEECCCCCC
Q ss_conf -97-5--39729997376100
Q gi|254780742|r 77 -IK-K--TNSQIIINVGSSFL 93 (419)
Q Consensus 77 -~~-~--~~~dvVin~~~p~~ 93 (419)
+. . -+.|++||++|.+.
T Consensus 79 ~~~~~~~G~lD~lvnnAG~~~ 99 (239)
T PRK08703 79 TIAEATQGKLDGIVHCAGYFY 99 (239)
T ss_pred HHHHHHCCCCCEEEECCCCCC
T ss_conf 999983799768996665457
No 207
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.14 E-value=4.5e-05 Score=53.01 Aligned_cols=81 Identities=15% Similarity=0.220 Sum_probs=61.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||.|+ +++|+.+++.|++... ++++.||+. ++.++++++... ..++...++|+.|.+++.++++..
T Consensus 9 KvalITGas~GIG~aiA~~la~~Ga---~V~~~~r~~-~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~ 79 (260)
T PRK12823 9 KVAVVTGAAQGIGRGVALRAAAEGA---RVVLVDRSE-LVHEVAAELVAA-----GGEALALTADLETYAGAQAVMAAAV 79 (260)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCH-HHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9899948867899999999998799---999996946-899999999854-----9948999812688589999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.++..
T Consensus 80 ~~~G~iDiLVnnag~~ 95 (260)
T PRK12823 80 EAFGRIDVLINNVGGT 95 (260)
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9839987999775224
No 208
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=98.13 E-value=4.1e-05 Score=53.30 Aligned_cols=119 Identities=13% Similarity=0.132 Sum_probs=80.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
-+|=++|.|.||+.+++.|.+... ++++.||++++++.+++.=. .. +.+ ..+++. ++
T Consensus 2 MkIgfIGlG~MG~~ma~~L~~~G~---~v~v~dr~~~~~~~l~~~Ga-----------~~----~~s---~~e~~~--~~ 58 (295)
T PRK11559 2 MKVGFIGLGIMGKPMSKNLLKAGY---SLVVYDRNPEAIADVIAAGA-----------ET----AST---AKAIAE--QC 58 (295)
T ss_pred CEEEEECCHHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHCCC-----------CC----CCC---HHHHHH--CC
T ss_conf 789998405769999999997899---58999299999999998599-----------20----399---999984--38
Q ss_pred CEEEECCCCCCC-HHHH------HHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHH
Q ss_conf 299973761003-2789------999862886896036642000014420000357751088885188699537501114
Q gi|254780742|r 83 QIIINVGSSFLN-MSVL------RACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGV 155 (419)
Q Consensus 83 dvVin~~~p~~~-~~v~------~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl 155 (419)
|+||.|++.... ..|+ -..+..|.-+||.|-.++... .+++++++++|+..| +|.+..|+
T Consensus 59 dvvi~~l~~~~~v~~v~~g~~gi~~~~~~g~iiid~sT~~p~~~------------~~~a~~~~~~g~~~l-DaPVsGg~ 125 (295)
T PRK11559 59 DVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLAS------------REISEALKAKGIEML-DAPVSGGE 125 (295)
T ss_pred CEEEEECCCCCCHHHHHHCCCCCHHCCCCCCEEEECCCCCHHHH------------HHHHHHHHHCCCEEE-ECCCCCCH
T ss_conf 87899668981077663077660113899988998999999999------------999999996598389-42476886
Q ss_pred HH
Q ss_conf 88
Q gi|254780742|r 156 VN 157 (419)
Q Consensus 156 ~~ 157 (419)
..
T Consensus 126 ~~ 127 (295)
T PRK11559 126 PK 127 (295)
T ss_pred HH
T ss_conf 88
No 209
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=98.13 E-value=2.5e-05 Score=54.79 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=64.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 97319998498779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.++|.++|+|.||++++.-|.++.-...+|.+.+|+.++++.+.+.++ +.+. .|.. ++++
T Consensus 1 mm~kI~~IG~G~Mg~Aii~gl~~~~~~~~~i~v~~r~~~~~~~l~~~~~----------v~~~----~~~~---~~~~-- 61 (267)
T PRK11880 1 MMKKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYG----------VRAA----TDNQ---EAAQ-- 61 (267)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHC----------CEEE----CCHH---HHHH--
T ss_conf 9987999866899999999999779894528997799999999999739----------6785----7869---8872--
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHC-CCCEEEEC
Q ss_conf 972999737610032789999862-88689603
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRACIDS-NVAYIDTA 112 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~i~~-g~hyvD~s 112 (419)
++|+|+-|+-|..-..+++..... +...|.+.
T Consensus 62 ~~diIiLaVKP~~~~~vl~~l~~~~~~~iISv~ 94 (267)
T PRK11880 62 EADVVVLAVKPQVMEDVLSELKGSLDKLVVSIA 94 (267)
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHHCCEEEEEC
T ss_conf 199999972878999999998765087899916
No 210
>PRK08374 homoserine dehydrogenase; Provisional
Probab=98.12 E-value=9.3e-05 Score=50.87 Aligned_cols=155 Identities=15% Similarity=0.156 Sum_probs=94.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---CCC-EEEEEECCHHH--------HHHHHHHHHHHCCCCCCCCCEEEEECCC
Q ss_conf 97319998498779999999996089---872-59996399999--------9999987343024555557308994378
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNND---ILG-DINIASRTLQK--------CSKIIDSIYKKKSLKIDGKLAIHQVDAL 68 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~---~~~-~i~va~r~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~D~~ 68 (419)
|+-+|.++|.|.||+.+++.|.++.+ ... -+.|++|+... ...+....... ......+. .+ .
T Consensus 1 m~i~I~l~G~G~VG~~~~~~L~~~~~~~g~~l~vv~i~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~--~~-~ 74 (316)
T PRK08374 1 MEVKVSLFGFGTVGRALAEILAEKSRVFGVELKVVSITDRSGTVWGDFDLLEAKEVKESTGKL---SNIGDYEV--YN-F 74 (316)
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCC---CCCCCHHH--CC-C
T ss_conf 951299993388999999999971887298659999995567634565556655533202543---44553012--04-8
Q ss_pred CHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 98999999975397299973761003278999986288689603664200001442000035775108888518869953
Q gi|254780742|r 69 NIKAVVELIKKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILG 148 (419)
Q Consensus 69 d~~~l~~~~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~ 148 (419)
++ .+++.+..+|+||.+.+.-......+.|+++|+|.|...=. .+.....+|.+.|+++|+.+.-+
T Consensus 75 ~~---~~i~~~~~~dvvVd~t~~~~~~~~~~~al~~G~hVVTANK~-----------~lA~~~~eL~~~A~~~~~~~~yE 140 (316)
T PRK08374 75 TP---EEIVEEVDPDIVVDVSSWDEAHEWYLTALKEGKSVVTSNKP-----------PIANHYDELLNEANERNLGYFFE 140 (316)
T ss_pred CH---HHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEECCCHH-----------HHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 98---99834889998998799969999999999889929978869-----------99851999999999749849995
Q ss_pred CCHHHHHHHHHHHHHHHHH-CCCCCEEEEE
Q ss_conf 7501114889999999974-3666389763
Q gi|254780742|r 149 AGFDPGVVNAFARLAQDEY-FDKITDIDII 177 (419)
Q Consensus 149 ~G~~PGl~~lla~~~~~~~-~d~~~~i~~~ 177 (419)
+-+..|+.=+-... +.+ .+++.+|.-.
T Consensus 141 asVggGiPiI~~lr--~~l~gd~I~~i~GI 168 (316)
T PRK08374 141 ATVMAGTPIIGLLR--ENLLGETIERIEAV 168 (316)
T ss_pred EEECCCCCCHHHHH--HHHCCCCCCEEEEE
T ss_conf 34000203169998--75146886389999
No 211
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=98.12 E-value=4.7e-05 Score=52.90 Aligned_cols=103 Identities=18% Similarity=0.346 Sum_probs=73.6
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-------------------HHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 19998498779999999996089872599963999-------------------99999998734302455555730899
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-------------------QKCSKIIDSIYKKKSLKIDGKLAIHQ 64 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~~~ 64 (419)
||||+|||++|..++.+|+..+ . .+|+|.|.|. .|++..++.+...++ ..+++...
T Consensus 1 KVlvvGaGglG~e~lk~La~~G-v-g~i~ivD~D~Ie~SNLnRQfLf~~~diGk~Ka~~a~~~l~~~Np---~v~I~~~~ 75 (312)
T cd01489 1 KVLVVGAGGIGCELLKNLVLTG-F-GEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNP---NVKIVAYH 75 (312)
T ss_pred CEEEECCCHHHHHHHHHHHHCC-C-CEEEEECCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCC---CCEEEEEC
T ss_conf 9899888888999999999828-9-85999719922610146682768221887099999999998888---96799861
Q ss_pred ECCCCHHHHHHHHHHCCCCEEEECCCCCC-CHHHHHHHHHCCCCEEEECC
Q ss_conf 43789899999997539729997376100-32789999862886896036
Q gi|254780742|r 65 VDALNIKAVVELIKKTNSQIIINVGSSFL-NMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 65 ~D~~d~~~l~~~~~~~~~dvVin~~~p~~-~~~v~~a~i~~g~hyvD~s~ 113 (419)
-++.+.+--.+++++ .|+|++++--+. ..-|=++|+..+++++|-+-
T Consensus 76 ~~i~~~~~~~~f~~~--~DvVi~alDN~~aR~~vN~~C~~~~~PlIegGt 123 (312)
T cd01489 76 ANIKDPDFNVEFFKQ--FDLVFNALDNLAARRHVNKMCLAADVPLIESGT 123 (312)
T ss_pred CCCCCCCCCHHHHHH--CCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 676686434988962--999997667899999999999983997597202
No 212
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.12 E-value=5.7e-05 Score=52.32 Aligned_cols=82 Identities=16% Similarity=0.292 Sum_probs=65.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEEC---------CHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHH
Q ss_conf 31999849-87799999999960898725999639---------999999999873430245555573089943789899
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASR---------TLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKA 72 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~ 72 (419)
|.+||-|+ +++|+.++..|+++.- ++++.|+ +.++++++++++.... .+....+.|+.|.++
T Consensus 7 KvalVTGas~GIG~aiA~~lA~~GA---~Vvi~D~~~~~~~~~~~~~~a~~~~~ei~~~g-----~~~~~~~~Dvsd~~~ 78 (285)
T PRK07791 7 RVVIVTGAGGGIGRAHALAFAAEGA---RVVVNDIGVGLDGSPASGGAAQAVVDEITAAG-----GEAVANGDDIADWDQ 78 (285)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHH
T ss_conf 8799928676899999999998699---99998376431224456799999999999749-----839999689999999
Q ss_pred HHHHHHHC-----CCCEEEECCCCC
Q ss_conf 99999753-----972999737610
Q gi|254780742|r 73 VVELIKKT-----NSQIIINVGSSF 92 (419)
Q Consensus 73 l~~~~~~~-----~~dvVin~~~p~ 92 (419)
+.+++++. +.|++||.+|-.
T Consensus 79 v~~~v~~~~~~fG~iDiLVNNAGi~ 103 (285)
T PRK07791 79 AANLVDAAVETFGGLDVLVNNAGIL 103 (285)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 9999999999839986999788667
No 213
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit; InterPro: IPR014215 This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by IPR014214 from INTERPRO. This protein is also known as SpoVFA..
Probab=98.11 E-value=1.2e-05 Score=56.88 Aligned_cols=122 Identities=17% Similarity=0.302 Sum_probs=83.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
-|++|+|-|++|+.+|+.+..-.. ++.|+-|+...+-++-+.- ++. ..-.+|++.+. ++
T Consensus 153 S~v~VlGfGRtG~tiAr~f~aLGA---~V~V~AR~~~dlARI~E~g-----------~~P-----~~~~~L~~~v~--e~ 211 (288)
T TIGR02853 153 SNVMVLGFGRTGMTIARTFSALGA---RVSVGARSSADLARITEMG-----------LEP-----VPLNKLEEKVA--EI 211 (288)
T ss_pred CEEEEECCCCHHHHHHHHHHHCCC---EEEEECCCHHHHHHHHHHC-----------CCC-----CCHHHHHHHHC--CC
T ss_conf 345788447056899999972698---0575317836789999960-----------688-----27167887650--00
Q ss_pred CEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHH
Q ss_conf 29997376100327899998628868960366420000144200003577510888851886995375011148899999
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAFARL 162 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~lla~~ 162 (419)
|+|||++|.-.-+.=+-.-+...+=.+|++..-. ...+ +-||+.|+.++. +|||..+.|=.
T Consensus 212 DIviNTiPaLvlt~~~l~~lp~~AviiDLAS~PG------------GtDF---~yAk~~Gi~A~L----APGLPGiVAPk 272 (288)
T TIGR02853 212 DIVINTIPALVLTKDVLSKLPKHAVIIDLASKPG------------GTDF---EYAKKRGIKALL----APGLPGIVAPK 272 (288)
T ss_pred CEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCC------------CCCH---HHHHHCCCEEEE----CCCCCCCCCCH
T ss_conf 2477067630036589952685848997327848------------7376---989862982897----18787830723
Q ss_pred HH
Q ss_conf 99
Q gi|254780742|r 163 AQ 164 (419)
Q Consensus 163 ~~ 164 (419)
.+
T Consensus 273 TA 274 (288)
T TIGR02853 273 TA 274 (288)
T ss_pred HH
T ss_conf 56
No 214
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=98.11 E-value=5e-05 Score=52.70 Aligned_cols=39 Identities=26% Similarity=0.472 Sum_probs=30.7
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH
Q ss_conf 19998498779999999996089872599963999999999
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKI 44 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~ 44 (419)
||||+|||+.|..++.+|+..+ ..+|+|.|.|.=....+
T Consensus 1 KVlvvGaGglGce~~k~La~~G--vg~i~iiD~D~Ie~SNL 39 (234)
T cd01484 1 KVLLVGAGGIGCELLKNLALMG--FGQIHVIDMDTIDVSNL 39 (234)
T ss_pred CEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCEECCCCC
T ss_conf 9899948887999999999839--98699975990056770
No 215
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.11 E-value=4.6e-05 Score=52.93 Aligned_cols=79 Identities=11% Similarity=0.207 Sum_probs=61.5
Q ss_pred CEEEEEC--CC-HHHHHHHHHHHHCCCCCCEEEEEECCHHHH-HHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 3199984--98-779999999996089872599963999999-9999873430245555573089943789899999997
Q gi|254780742|r 3 KNVLIIG--AG-GVAHVVAHKCAQNNDILGDINIASRTLQKC-SKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 3 k~ilv~G--aG-~vG~~~~~~L~~~~~~~~~i~va~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
|.+||.| ++ ++|..+++.|+++.- ++++.||+.+++ +++++.++. +....++|+.|.+++.++++
T Consensus 8 K~~lVTG~~~~~GIG~a~A~~la~~GA---~Vvi~~~~~~~~~~~~~~~~~~--------~~~~i~~Dv~~~~~v~~~~~ 76 (256)
T PRK07889 8 KRILVTGVITDSSIAFHIARVAQEQGA---EVVLTGFRRLRLTERIAKRLPE--------PAPVLELDVTNEEHLASLAD 76 (256)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHHCCC--------CCEEEEEECCCHHHHHHHHH
T ss_conf 979998998856899999999998799---9999838935899999986588--------87599942889999999999
Q ss_pred HC-----CCCEEEECCCCC
Q ss_conf 53-----972999737610
Q gi|254780742|r 79 KT-----NSQIIINVGSSF 92 (419)
Q Consensus 79 ~~-----~~dvVin~~~p~ 92 (419)
+. +.|++||.++..
T Consensus 77 ~~~~~~G~lD~lVnnag~~ 95 (256)
T PRK07889 77 RVREHIGGLDGVVHSIGFA 95 (256)
T ss_pred HHHHHHCCCCEEEECCCCC
T ss_conf 9999868978797421347
No 216
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.11 E-value=5.5e-05 Score=52.43 Aligned_cols=84 Identities=21% Similarity=0.283 Sum_probs=64.6
Q ss_pred CEEEEECCC---HHHHHHHHHHHHCCCCCCEEEEE-----------ECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
Q ss_conf 319998498---77999999999608987259996-----------3999999999987343024555557308994378
Q gi|254780742|r 3 KNVLIIGAG---GVAHVVAHKCAQNNDILGDINIA-----------SRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDAL 68 (419)
Q Consensus 3 k~ilv~GaG---~vG~~~~~~L~~~~~~~~~i~va-----------~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~ 68 (419)
|.+||.|++ ++|+.+++.|++..- ++++. +++.++..++++++... ..++...++|+.
T Consensus 7 KvalVTGas~~~GIG~aiA~~la~~Ga---~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dl~ 78 (257)
T PRK12859 7 KVAVVTGVSRLDGIGAAICKELAEAGY---DIFFTYWTAYDKEMPWGVDQSEQIQLQEELLKN-----GVKVSSMELDLT 78 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHC-----CCEEEEEECCCC
T ss_conf 889992889998629999999998799---899983652011123453757999999999954-----985999983589
Q ss_pred CHHHHHHHHHHC-----CCCEEEECCCCCCC
Q ss_conf 989999999753-----97299973761003
Q gi|254780742|r 69 NIKAVVELIKKT-----NSQIIINVGSSFLN 94 (419)
Q Consensus 69 d~~~l~~~~~~~-----~~dvVin~~~p~~~ 94 (419)
+.+++.+++.+. ..|++||.++....
T Consensus 79 ~~~~~~~~i~~~~~~~g~iDilVnnAg~~~~ 109 (257)
T PRK12859 79 QNDAPKELINKVTEQLGYPHILINNAAYSTN 109 (257)
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
T ss_conf 9999999999999982999899989999999
No 217
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.10 E-value=4.7e-05 Score=52.89 Aligned_cols=82 Identities=18% Similarity=0.249 Sum_probs=62.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++..- ++++.+|+. ++++..+.+... ..++...++|+.|.+++.++++..
T Consensus 16 KvalVTGas~GIG~aiA~~la~~Ga---~Vvi~~~~~-~~~~~~~~~~~~-----g~~~~~~~~Dvs~~~~v~~~v~~~~ 86 (258)
T PRK06935 16 KVAIVTGGNTGLGQGYAVALAKAGA---DIIITTHGT-NWDETRRLIEKE-----GRKVTFVQLDLTKKESAEAVVAEAL 86 (258)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCC-CHHHHHHHHHHC-----CCCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 9899948575899999999998799---999972997-899999999966-----9937999904899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 87 ~~~G~iDiLVNNAG~~~ 103 (258)
T PRK06935 87 EKFGKIDILVNNAGTIR 103 (258)
T ss_pred HHCCCCCEEEECCCCCC
T ss_conf 97499999998999999
No 218
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.09 E-value=6e-05 Score=52.19 Aligned_cols=83 Identities=17% Similarity=0.227 Sum_probs=66.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-87799999999960898725999-63999999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINI-ASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~v-a~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.+||-|+ .++|+.++..|+++.. ++++ .+++.+.+++.++.+.+.. .+....+.|+.+.+++.+++.+.
T Consensus 4 KvalITGgs~GIG~aiA~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~Dvs~~~~v~~~~~~~ 75 (249)
T PRK06077 4 KVVVVTGSGRGIGRAIAVRLAKEGA---KVVVNAKKRAEEMNETLRMVKEYG-----GEGIGVLADVSTREGCRTLAKAA 75 (249)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHH
T ss_conf 9899926367899999999998799---899984887689999999999759-----95899984799999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 76 ~~~~g~iDiLVnNAG~~~ 93 (249)
T PRK06077 76 LDNFGVVDILVNNAGLGL 93 (249)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998199888998577578
No 219
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process.
Probab=98.09 E-value=9.5e-06 Score=57.58 Aligned_cols=70 Identities=17% Similarity=0.279 Sum_probs=52.8
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 1999849-877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+|||+|| |.+|+...+.|.+.. ..+++.++..++.. .-+..++|+.|++.|.++++..++
T Consensus 1 rilitGa~GQlG~~L~~~l~~~g----~~~~~~~~~~~~~~---------------~~~~~~~Dl~dP~~l~~~~r~~~P 61 (317)
T TIGR01214 1 RILITGANGQLGRELVQQLSKPG----RVVVALTRSTRLKL---------------AARWSQLDLTDPEALEELLRAIRP 61 (317)
T ss_pred CEEEECCCCHHHHHHHHHCCCCC----CEEEEECCCCCCCH---------------HHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 97887387567999999707888----27864368777611---------------336544062246889999985287
Q ss_pred CEEEECCCCC
Q ss_conf 2999737610
Q gi|254780742|r 83 QIIINVGSSF 92 (419)
Q Consensus 83 dvVin~~~p~ 92 (419)
|+||||+=+.
T Consensus 62 d~vvntAAYT 71 (317)
T TIGR01214 62 DAVVNTAAYT 71 (317)
T ss_pred CEEEECCHHC
T ss_conf 5376230110
No 220
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.09 E-value=7.5e-05 Score=51.53 Aligned_cols=84 Identities=17% Similarity=0.316 Sum_probs=65.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 731999849-877999999999608987259996-399999999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIA-SRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
.|.+||.|+ +++|+.++..|+++.- ++++. .++.+.++++++++... ..++...++|+.|.+++.++++.
T Consensus 5 gK~alVTGgs~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~v~~ 76 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAADGF---AVAVNYAGSAAMADELVEEIEAA-----GGRAIAVQADVADAAAVDRLFEA 76 (245)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHH
T ss_conf 98899948577899999999998799---99997699868999999999965-----99589998378999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||.+|-..
T Consensus 77 ~~~~~g~iDilVnNAg~~~ 95 (245)
T PRK12937 77 AETAFGRIDVLVNSAGIMP 95 (245)
T ss_pred HHHHHCCCCEEEEECCCCC
T ss_conf 9998199889998054899
No 221
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=98.08 E-value=4.8e-05 Score=52.84 Aligned_cols=139 Identities=13% Similarity=0.144 Sum_probs=79.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.-+|.|.|| |.||+.++..+.++.+.. -...-+|.... .+-..+.... ..+ ..++.-.+++.+++.
T Consensus 1 m~ikI~i~Ga~GrMG~~i~~~i~~~~~~~-l~~~i~~~~~~--~~g~~~~~~~------~~~--~~~~~~~~~l~~~~~- 68 (265)
T PRK00048 1 MMIKVGVAGASGRMGRELIEAVEAAEDLE-LVAALDRPGSP--LVGQDAGELA------GLG--KLGVPITDDLEAVLD- 68 (265)
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHCCCCE-EEEEEECCCCC--CCCCCHHHHC------CCC--CCCCEECCCHHHHHC-
T ss_conf 94599998888877999999998689979-99999468972--3365356652------767--678431178988605-
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHCCCCEEE-ECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHH--
Q ss_conf 3972999737610032789999862886896-0366420000144200003577510888851886995375011148--
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRACIDSNVAYID-TAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVV-- 156 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD-~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~-- 156 (419)
.+||||.-..|..-...++.|+++++++|- +||..+. ....+.+.++ .+.++..-=++-|+.
T Consensus 69 -~~DVvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG~~~~------------~~~~i~~~s~--~ipil~apNfSlGvnll 133 (265)
T PRK00048 69 -DFDVLIDFTTPEATLENLEFALEHGKPLVIGTTGFTEE------------QLAALREAAK--KIPVVIAPNFSVGVNLL 133 (265)
T ss_pred -CCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHH------------HHHHHHHHCC--CCCEEEECCHHHHHHHH
T ss_conf -59989989988999999999997499779960899989------------9999997465--88789978558999999
Q ss_pred HHHHHHHHHH
Q ss_conf 8999999997
Q gi|254780742|r 157 NAFARLAQDE 166 (419)
Q Consensus 157 ~lla~~~~~~ 166 (419)
.-++..+++.
T Consensus 134 ~~l~~~aa~~ 143 (265)
T PRK00048 134 MKLAEKAAKY 143 (265)
T ss_pred HHHHHHHHHH
T ss_conf 9999999975
No 222
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.06 E-value=0.00015 Score=49.55 Aligned_cols=37 Identities=19% Similarity=0.374 Sum_probs=16.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH
Q ss_conf 1999849877999999999608987259996399999999
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSK 43 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~ 43 (419)
+++|+|.|.+|+.+++.|..-. -+++|++|+.+.+.+
T Consensus 154 ~~lVlG~Gr~G~~lA~~l~~lG---A~V~V~aR~~~~~a~ 190 (296)
T PRK08306 154 NVLVLGFGRTGMTLARTLKALG---AKVKVGARKSAHLAR 190 (296)
T ss_pred CEEEECCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHH
T ss_conf 5899898689999999999779---969999799999999
No 223
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.06 E-value=6.2e-05 Score=52.09 Aligned_cols=81 Identities=14% Similarity=0.182 Sum_probs=62.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++... .+++.+|+.++. +.++++... ..+....++|+.|.+++.++++..
T Consensus 8 KvalVTG~s~GIG~a~a~~la~~Ga---~v~i~~~~~~~~-~~~~~~~~~-----~~~~~~~~~Dvs~~~~v~~~v~~~~ 78 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEGA---IPVVFGRSAPDD-EFAEELRAL-----QPRAEFVQVDLQDDAQCRDAVAQTV 78 (258)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCHH-HHHHHHHHC-----CCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 9899927777899999999998799---899980880239-999999953-----9978999952799999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|..
T Consensus 79 ~~~g~iDiLVnnAGi~ 94 (258)
T PRK08628 79 AKFGRIDGLVNNAGVN 94 (258)
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9829988999888227
No 224
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase; InterPro: IPR011294 This entry represents a subfamily of the short chain dehydrogenases. Characterised members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polymers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.; GO: 0003858 3-hydroxybutyrate dehydrogenase activity.
Probab=98.05 E-value=7.7e-05 Score=51.45 Aligned_cols=85 Identities=14% Similarity=0.201 Sum_probs=72.7
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECC--HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 731999849-877999999999608987259996399--99999999873430245555573089943789899999997
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRT--LQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
.|.+||-|+ +|+|..++..|++..- +|++.|++ .+.+++..+.+.... -+.....+|+++.++++.++.
T Consensus 1 ~ktalVTGaaSGIG~~iA~~LA~aGa---~v~~~d~~~~~~~~~~~~~~~~~~G-----~~v~~~~~D~T~~~e~~~~~~ 72 (258)
T TIGR01963 1 GKTALVTGAASGIGLAIAKALAAAGA---NVVVNDLGEADEGAEAAAKVATDAG-----GSVIYLVADVTKEEEIADMIQ 72 (258)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHH
T ss_conf 94899965871678999999987298---8998467887899999999999618-----835775147888899999999
Q ss_pred HC-----CCCEEEECCCCCCC
Q ss_conf 53-----97299973761003
Q gi|254780742|r 79 KT-----NSQIIINVGSSFLN 94 (419)
Q Consensus 79 ~~-----~~dvVin~~~p~~~ 94 (419)
.. +.||+||=+|=.+-
T Consensus 73 ~~~~~fG~~DiLVNNAG~QhV 93 (258)
T TIGR01963 73 AVAAEFGGLDILVNNAGIQHV 93 (258)
T ss_pred HHHHHHCCCCEEEECCCEEEC
T ss_conf 999985688748844640141
No 225
>PRK06349 homoserine dehydrogenase; Provisional
Probab=98.05 E-value=1.5e-05 Score=56.23 Aligned_cols=144 Identities=16% Similarity=0.221 Sum_probs=96.7
Q ss_pred CCC-EEEEECCCHHHHHHHHHHHHCCCC--------CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHH
Q ss_conf 973-199984987799999999960898--------72599963999999999987343024555557308994378989
Q gi|254780742|r 1 MKK-NVLIIGAGGVAHVVAHKCAQNNDI--------LGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIK 71 (419)
Q Consensus 1 M~k-~ilv~GaG~vG~~~~~~L~~~~~~--------~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~ 71 (419)
|++ +|-++|.|.||+.+++.|.++.+. ..-..+++||.+|.+.+ .. +.. .. ..|.+
T Consensus 1 M~~ikIgl~G~GtVG~gv~~il~~~~~~i~~~~g~~~~i~~i~~r~~~k~r~~----------~~-~~~-~~---t~d~~ 65 (432)
T PRK06349 1 MKPLKVGLLGLGTVGSGVVRILEENAEEIAARAGRPIEIKKVAVRDLEKDRGV----------DL-SGY-LL---TTDPE 65 (432)
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC----------CC-CCC-EE---ECCHH
T ss_conf 95538999987806999999999809999998699769999996897535589----------99-855-55---47999
Q ss_pred HHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCC
Q ss_conf 999999753972999737610-0327899998628868960366420000144200003577510888851886995375
Q gi|254780742|r 72 AVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAG 150 (419)
Q Consensus 72 ~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G 150 (419)
+++.+...|+||-+.|.. .....++.|+++|+|.|...= ..+...-.+|.+.|+++|+.+.-++-
T Consensus 66 ---~i~~d~~idivVEliGG~~~A~~~i~~AL~~GkhVVTANK-----------allA~~g~eL~~lA~~~gv~l~fEAa 131 (432)
T PRK06349 66 ---ELVNDPDIDIVVELMGGIEPARELILAALEAGKHVVTANK-----------ALLAVHGNELFAAAEEKGVDLYFEAA 131 (432)
T ss_pred ---HHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEECCH-----------HHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf ---9943899989999669950799999999985996892587-----------99986799999999871964999632
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCEEE
Q ss_conf 01114889999999974-36663897
Q gi|254780742|r 151 FDPGVVNAFARLAQDEY-FDKITDID 175 (419)
Q Consensus 151 ~~PGl~~lla~~~~~~~-~d~~~~i~ 175 (419)
+..|+.=+-.. .+.+ .+++.+|.
T Consensus 132 V~GGIPiI~~l--~~~l~~~~i~~i~ 155 (432)
T PRK06349 132 VAGGIPIIKAL--REGLAANRITRVM 155 (432)
T ss_pred CCCCCHHHHHH--HHHHHCCCCEEEE
T ss_conf 24661206999--8764047743776
No 226
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=98.05 E-value=0.00023 Score=48.17 Aligned_cols=104 Identities=16% Similarity=0.142 Sum_probs=64.4
Q ss_pred CCC-EEEEECC-CHHHHHHHHHHHHCCCCCCEEE-EE-ECCHHHHHHHHHHHHHHCCCCC---CCCCEEEEECCCCHHHH
Q ss_conf 973-1999849-8779999999996089872599-96-3999999999987343024555---55730899437898999
Q gi|254780742|r 1 MKK-NVLIIGA-GGVAHVVAHKCAQNNDILGDIN-IA-SRTLQKCSKIIDSIYKKKSLKI---DGKLAIHQVDALNIKAV 73 (419)
Q Consensus 1 M~k-~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~-va-~r~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~D~~d~~~l 73 (419)
|+| +|-|+|| |.+|...++.|..|+.. +++ |+ +++. ..+++.+.+........ -..+....+| ...
T Consensus 1 M~kikvaIvGatGy~G~ELirlL~~HP~~--ei~~l~aS~~~-aGk~~~~~~~~~~~~~~p~~~~~l~~~~~~---~~~- 73 (350)
T PRK08664 1 MDKLKVGVLGATGLVGQRFVQLLANHPWF--EVTALAASERS-AGKTYGEAVRWQLDGPIPEEVADLEVVSTD---PVD- 73 (350)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCC--EEEEEEECCCC-CCCCHHHHHCCCCCCCCCCCCCCEEEEECC---HHH-
T ss_conf 99777999898429999999999709996--68999965533-788415520322346676444650798688---457-
Q ss_pred HHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 9999753972999737610032789999862886896036642
Q gi|254780742|r 74 VELIKKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHES 116 (419)
Q Consensus 74 ~~~~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~ 116 (419)
++ ++|+|..|+|.-....+++..+++|+..||+|.+..
T Consensus 74 ---~~--~~DvvF~AlPhg~s~~~~~~l~~~g~~VIDlSadfR 111 (350)
T PRK08664 74 ---VD--DVDIVFSALPSDVAAEVEEEFAKAGKPVFSNASAHR 111 (350)
T ss_pred ---HC--CCCEEEECCCCHHHHHHHHHHHHCCCEEEECCHHHC
T ss_conf ---43--899999989826999999999877988997862203
No 227
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=98.04 E-value=0.00021 Score=48.48 Aligned_cols=92 Identities=16% Similarity=0.237 Sum_probs=67.5
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
+|+|+|||.||+..|+.|.+... +++|-|+|+++++++.+.+. +.+..-|..+++-|.++=-+ ++|
T Consensus 2 ~IiI~GaG~vG~~La~~Ls~e~~---dV~vID~d~~~~~~~~~~lD----------v~~i~Gd~~~~~~L~~Agi~-~ad 67 (455)
T PRK09496 2 KIIILGAGQVGGTLAERLVGENN---DVTVIDTDEERLRRLQDRLD----------VRTVVGNGSHPDVLREAGAE-DAD 67 (455)
T ss_pred EEEEECCCHHHHHHHHHHHHCCC---CEEEEECCHHHHHHHHHHCC----------EEEEEECCCCHHHHHHCCCC-CCC
T ss_conf 79999988899999999986899---79999899999999886258----------68999668999999965998-699
Q ss_pred EEEECCCCC-CCHHHHHHHHH-CCCCEE
Q ss_conf 999737610-03278999986-288689
Q gi|254780742|r 84 IIINVGSSF-LNMSVLRACID-SNVAYI 109 (419)
Q Consensus 84 vVin~~~p~-~~~~v~~a~i~-~g~hyv 109 (419)
++|.+..-- .|.-+...|-+ .|+...
T Consensus 68 ~~IAvT~~De~Nli~~~lAk~l~g~~~t 95 (455)
T PRK09496 68 MLIAVTDSDETNMVACQIAKSLFGTPTK 95 (455)
T ss_pred EEEEECCCHHHHHHHHHHHHHHCCCCCE
T ss_conf 9999579718999999999986699824
No 228
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.03 E-value=4.6e-05 Score=52.96 Aligned_cols=82 Identities=23% Similarity=0.388 Sum_probs=62.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|+ |||+|+ |.+|+...+.|. .. .+++-.+| ..+|+.|++.+.+++++
T Consensus 1 M~--iLi~G~~GqLG~~L~~~l~--~~--~~v~a~~~--------------------------~~~Ditd~~~v~~~i~~ 48 (281)
T COG1091 1 MK--ILITGANGQLGTELRRALP--GE--FEVIATDR--------------------------AELDITDPDAVLEVIRE 48 (281)
T ss_pred CC--EEEECCCCHHHHHHHHHHC--CC--CEEEECCC--------------------------CCCCCCCHHHHHHHHHH
T ss_conf 95--8997698767999999717--78--43995157--------------------------65555685899999986
Q ss_pred CCCCEEEECCCCCC--------------C----HHHHHHHHHCCCCEEEECCC
Q ss_conf 39729997376100--------------3----27899998628868960366
Q gi|254780742|r 80 TNSQIIINVGSSFL--------------N----MSVLRACIDSNVAYIDTAIH 114 (419)
Q Consensus 80 ~~~dvVin~~~p~~--------------~----~~v~~a~i~~g~hyvD~s~~ 114 (419)
.++|+||||+.+.- | ..++++|-+.|..+|=+|-+
T Consensus 49 ~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTD 101 (281)
T COG1091 49 TRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTD 101 (281)
T ss_pred HCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
T ss_conf 19998998732036541338989977767799999999999719769996344
No 229
>KOG1502 consensus
Probab=98.03 E-value=0.00013 Score=49.94 Aligned_cols=102 Identities=17% Similarity=0.183 Sum_probs=75.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH--HHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999--9987343024555557308994378989999999
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSK--IIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELI 77 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~ 77 (419)
+.+.|+|.|| |++|+.++..|.+++- .+.-.-|++++-+. ....+.. ...+++..+.|+.|.+++...+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY---~V~gtVR~~~~~k~~~~L~~l~~-----a~~~l~l~~aDL~d~~sf~~ai 76 (327)
T KOG1502 5 EGKKVCVTGASGFIGSWIVKLLLSRGY---TVRGTVRDPEDEKKTEHLRKLEG-----AKERLKLFKADLLDEGSFDKAI 76 (327)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCC---EEEEEECCCCHHHHHHHHHHCCC-----CCCCCEEEECCCCCCCHHHHHH
T ss_conf 872799948820899999999986899---89999708630565899986515-----7544258852435513599997
Q ss_pred HHCCCCEEEECCCCCCC-----------------HHHHHHHHHCC--CCEEEEC
Q ss_conf 75397299973761003-----------------27899998628--8689603
Q gi|254780742|r 78 KKTNSQIIINVGSSFLN-----------------MSVLRACIDSN--VAYIDTA 112 (419)
Q Consensus 78 ~~~~~dvVin~~~p~~~-----------------~~v~~a~i~~g--~hyvD~s 112 (419)
+ +||.|++++-|+.. ..|+++|.+.. ...|=+|
T Consensus 77 ~--gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TS 128 (327)
T KOG1502 77 D--GCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTS 128 (327)
T ss_pred H--CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 0--787899917667877787477663178888999999986058722699961
No 230
>KOG1014 consensus
Probab=98.03 E-value=5.8e-05 Score=52.26 Aligned_cols=86 Identities=19% Similarity=0.225 Sum_probs=68.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHH----HHHHHH
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989----999999
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIK----AVVELI 77 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~----~l~~~~ 77 (419)
+=.+|-|| .++|+.-+++||+++ .++++-+|+.+|++++++++..... ..+.++.+|-.+.+ ++.+.+
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG---~nvvLIsRt~~KL~~v~kEI~~~~~----vev~~i~~Dft~~~~~ye~i~~~l 122 (312)
T KOG1014 50 SWAVVTGATDGIGKAYARELAKRG---FNVVLISRTQEKLEAVAKEIEEKYK----VEVRIIAIDFTKGDEVYEKLLEKL 122 (312)
T ss_pred CEEEEECCCCCCHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHHHC----CEEEEEEEECCCCCHHHHHHHHHH
T ss_conf 779997788852299999999759---8799996888999999999988758----079999986489815689999886
Q ss_pred HHCCCCEEEECCCCCCCH
Q ss_conf 753972999737610032
Q gi|254780742|r 78 KKTNSQIIINVGSSFLNM 95 (419)
Q Consensus 78 ~~~~~dvVin~~~p~~~~ 95 (419)
.+...-++||++|-.+.+
T Consensus 123 ~~~~VgILVNNvG~~~~~ 140 (312)
T KOG1014 123 AGLDVGILVNNVGMSYDY 140 (312)
T ss_pred CCCCEEEEEECCCCCCCC
T ss_conf 278648999655316788
No 231
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.02 E-value=0.0001 Score=50.64 Aligned_cols=83 Identities=20% Similarity=0.248 Sum_probs=63.8
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHH-HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-877999999999608987259996399999-9999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQK-CSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.+||-|+ .++|+.++..|++..- +++|.+|+.++ ++.+++.+... ..+....+.|+.|.+++++++++.
T Consensus 46 KvalVTGgs~GIG~aiA~~la~~GA---~V~i~~~~~~~~a~~~~~~~~~~-----G~~~~~~~~Dv~d~~~v~~~v~~~ 117 (289)
T PRK06701 46 KVALITGGDSGIGRAVAVAFAKEGA---DIAIVYLDEHEDANETKQRVEKE-----GVKCLLIPGDVSDEQFCKDAVEET 117 (289)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHHHHHC-----CCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 9899968257999999999998799---89998289467899999999963-----990899984789999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.++...
T Consensus 118 ~~~fG~iDiLVNNAG~~~ 135 (289)
T PRK06701 118 VRELGRLDILVNNAAQQY 135 (289)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998599989998883467
No 232
>COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]
Probab=98.02 E-value=0.00013 Score=49.94 Aligned_cols=158 Identities=13% Similarity=0.184 Sum_probs=103.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 97319998498779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.-+++++|-|.+|...++.|.++++.. -+-...++..|.-+=+.++...+. .-+ .+-++.+...+...
T Consensus 1 m~~~vvqyGtG~vGv~air~l~akpe~e-lvgawv~s~ak~Gkdlgelagl~d------lgV--~a~~~~~avlAtl~-- 69 (350)
T COG3804 1 MSLRVVQYGTGSVGVAAIRGLLAKPELE-LVGAWVHSAAKSGKDLGELAGLPD------LGV--IATNSIDAVLATLA-- 69 (350)
T ss_pred CCCEEEEECCCHHHHHHHHHHHCCCCCC-EEEEEECCCCCCCCCHHHHCCCCC------CEE--EEECCCCCCEECCC--
T ss_conf 9730589625557799999997088971-689995174001301787648888------516--86523222000266--
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCC--HHHHHHHHHHHHHCCCEEEECCCHHHHHHHH
Q ss_conf 97299973761003278999986288689603664200001442000--0357751088885188699537501114889
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWY--NNYEWSLLDECRTKSITAILGAGFDPGVVNA 158 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~--~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~l 158 (419)
.+++.+..-|. ..-.+.|+.+|+|.|..+-... .+|. .+...+-++.|+++|..-+.+.|.+||.++.
T Consensus 70 -~~~~y~~~~~~--~~~y~rlL~aGiNVv~~g~~l~-------yPw~~~PelaeKpl~lAaraGn~Tl~gtGI~pGF~~d 139 (350)
T COG3804 70 -DAVIYAPLLPS--VDEYARLLRAGINVVTPGPVLQ-------YPWFYPPELAEKPLELAARAGNATLHGTGIGPGFVTD 139 (350)
T ss_pred -CCEEEECCCCH--HHHHHHHHHCCCCEECCCCCCC-------CCCCCCHHHHHCHHHHHHHCCCCEEEECCCCCCHHHH
T ss_conf -63156102612--9999999975870661585334-------7786796786555789985387468832668118999
Q ss_pred HHHHHHHHHCCCCCEEEEEEC
Q ss_conf 999999974366638976302
Q gi|254780742|r 159 FARLAQDEYFDKITDIDIIDV 179 (419)
Q Consensus 159 la~~~~~~~~d~~~~i~~~~~ 179 (419)
+.--+..-...+++.|....+
T Consensus 140 llpmlLsgpcteve~ir~~e~ 160 (350)
T COG3804 140 LLPMLLSGPCTEVEFIRSEEF 160 (350)
T ss_pred HHHHHHCCCCCCEEEEEEEEH
T ss_conf 999987165432588750001
No 233
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.02 E-value=0.0001 Score=50.61 Aligned_cols=78 Identities=17% Similarity=0.273 Sum_probs=59.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++..- ++++.+++.++..+ ++.. .+....++|+.|.+++.+++++.
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~---~~~~-------~~~~~~~~Dvt~~~~v~~~v~~~~ 74 (254)
T PRK06463 8 KVALITGGSRGIGRAIAEKFLKEGA---KVAILYNSSEDKAK---ELKE-------KGVETFKCDVSNRDQVRKAKEEIH 74 (254)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHH---HHHH-------CCCEEEEEECCCHHHHHHHHHHHH
T ss_conf 9899948477899999999998899---99996499789999---9986-------698899973899999999999999
Q ss_pred ----CCCEEEECCCCCC
Q ss_conf ----9729997376100
Q gi|254780742|r 81 ----NSQIIINVGSSFL 93 (419)
Q Consensus 81 ----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 75 ~~~G~iDiLVNNAG~~~ 91 (254)
T PRK06463 75 KKLGRIDVLVNNAGIWY 91 (254)
T ss_pred HHHCCCCEEEECCCCCC
T ss_conf 98299989998997789
No 234
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.02 E-value=0.00012 Score=50.09 Aligned_cols=80 Identities=15% Similarity=0.214 Sum_probs=59.0
Q ss_pred CEEEEECC-C--HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 31999849-8--77999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 3 KNVLIIGA-G--GVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 3 k~ilv~Ga-G--~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|++||.|+ | ++|+.+++.|++..- ++++.+|+. ++++.++++.+... .-...++|+.|.+++.+++..
T Consensus 6 K~alITGaag~~GIG~aiA~~la~~GA---~V~i~~~~~-~~~~~~~~l~~~~g-----~~~~~~~Dvs~~~~v~~~~~~ 76 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQGA---ELAFTYLND-ALKKRVEPIAQELG-----SPYVYELDVSKEEHFKSLAES 76 (274)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCC---EEEEEECCH-HHHHHHHHHHHHCC-----CCEEEEECCCCHHHHHHHHHH
T ss_conf 879998999983799999999998699---999984887-89999999998629-----976999028999999999999
Q ss_pred C-----CCCEEEECCCC
Q ss_conf 3-----97299973761
Q gi|254780742|r 80 T-----NSQIIINVGSS 91 (419)
Q Consensus 80 ~-----~~dvVin~~~p 91 (419)
. +.|++||.++.
T Consensus 77 i~~~~G~iDilVnnag~ 93 (274)
T PRK08415 77 IKKDLGEIDFIVHSVAF 93 (274)
T ss_pred HHHHHCCCCEEEECCCC
T ss_conf 99985898888533555
No 235
>PRK08291 ornithine cyclodeaminase; Validated
Probab=98.01 E-value=0.00016 Score=49.31 Aligned_cols=103 Identities=13% Similarity=0.178 Sum_probs=75.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+.+.|+|+|..++.-++.|..-.+. .++.|.+|++++++++++++.... .+++..+ .+ ..+.++ ++
T Consensus 133 ~~l~iiG~G~QA~~~l~Al~~v~~i-~~v~v~~r~~~~a~~f~~~~~~~~------g~~v~~~--~~---~~~av~--~a 198 (330)
T PRK08291 133 SRVAVFGAGEQARLQLEALTLVRDI-REVRVWARDAAKAEAFAAELRAAL------GIPVTVA--RD---VHAALA--GA 198 (330)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCC-CEEEEECCCHHHHHHHHHHHHHHH------CCCEEEE--CC---HHHHHH--CC
T ss_conf 5699987648899999999973897-689998389899999999998976------9966992--99---999972--28
Q ss_pred CEEEECCCCCCCHHHH-HHHHHCCCCEEEECCCCCCHHCC
Q ss_conf 2999737610032789-99986288689603664200001
Q gi|254780742|r 83 QIIINVGSSFLNMSVL-RACIDSNVAYIDTAIHESPLKIC 121 (419)
Q Consensus 83 dvVin~~~p~~~~~v~-~a~i~~g~hyvD~s~~~~~~~~~ 121 (419)
|+|+.+.+. . .+++ ...+..|+|..-++.+.+..+++
T Consensus 199 DIIvtaT~s-~-~Pv~~~~~lkpG~hI~aiGs~~p~~rEl 236 (330)
T PRK08291 199 DIVVTTTPS-E-EPILKAEWLHPGLHVTAMGSDAEHKNEI 236 (330)
T ss_pred CEEEEEECC-C-CCCCCHHHCCCCCEEEEECCCCCCCCCC
T ss_conf 889997689-9-9501510069982899706999874524
No 236
>pfam03447 NAD_binding_3 Homoserine dehydrogenase, NAD binding domain. This domain adopts a Rossmann NAD binding fold. The C-terminal domain of homoserine dehydrogenase contributes a single helix to this structural domain, which is not included in the Pfam model.
Probab=98.00 E-value=4.2e-05 Score=53.18 Aligned_cols=113 Identities=12% Similarity=0.185 Sum_probs=75.5
Q ss_pred CCCHHHHHHHHHHHHCCCC--CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEE
Q ss_conf 4987799999999960898--72599963999999999987343024555557308994378989999999753972999
Q gi|254780742|r 9 GAGGVAHVVAHKCAQNNDI--LGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQIII 86 (419)
Q Consensus 9 GaG~vG~~~~~~L~~~~~~--~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dvVi 86 (419)
|+|.||+.+++.|.++... ..-..|++|+..+.++... .+.... ..|.+ +++.+..+|+||
T Consensus 1 G~G~VG~~v~~~l~~~~~~~~~~l~~v~~r~~~~~~~~~~----------~~~~~~----~~d~~---~ll~~~~iDvVV 63 (116)
T pfam03447 1 GCGAIGSGLLELLLRQQEEIPLELVAVADRDLLSKARAAL----------LGDEPV----TLDLD---DLVADPRPDVVV 63 (116)
T ss_pred CCCCHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCCC----------CCCCEE----ECCHH---HHHCCCCCCEEE
T ss_conf 9870289999999949203567999998478343232124----------666715----77999---996188998999
Q ss_pred ECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 7376100327899998628868960366420000144200003577510888851886995
Q gi|254780742|r 87 NVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAIL 147 (419)
Q Consensus 87 n~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~ 147 (419)
-+.|......++..|+++|+|.|..+=.- +. ......+|.+.|+++|+.+.-
T Consensus 64 E~~g~~~~~~~~~~aL~~GkhVVTaNK~~--lA-------~~~~~~eL~~~A~~~g~~~~f 115 (116)
T pfam03447 64 ECASSEAVAEYVLKALKAGKHVVTASKGA--LA-------DLALRERLREAAEASGVRVYF 115 (116)
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEECHHH--HC-------CHHHHHHHHHHHHHCCCEEEE
T ss_conf 88994899999999998799899907889--67-------857999999999983996972
No 237
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=98.00 E-value=0.00028 Score=47.68 Aligned_cols=107 Identities=13% Similarity=0.266 Sum_probs=67.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCC-------------CCCCCCCEEEEECCC
Q ss_conf 7319998498779999999996089872599963999999999987343024-------------555557308994378
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKS-------------LKIDGKLAIHQVDAL 68 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~-------------~~~~~~~~~~~~D~~ 68 (419)
+.+|=++|.|.||+.+|..|+++. .++.|-+|+.++.+.+.++...... ....||.-..-+.+.
T Consensus 5 ~~~IGiIGLGvMG~nmA~Nl~~~G---~~V~vynrt~~k~~~~~~~~~~~~~~i~~~~sl~e~v~sl~~pr~Iilmv~aG 81 (474)
T PTZ00142 5 ESDIGLIGLAVMGQNLSLNMYSRG---FKVSVYNRTTEKVEEFMKKAKEGNKFVKGYHSLEELVNSLKRPRRVMLLIKAG 81 (474)
T ss_pred CCCEEEEEEHHHHHHHHHHHHHCC---CEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCC
T ss_conf 674668736386799999999789---87999779879999999853224677646678999997379999899982698
Q ss_pred CH-----HHHHHHHHHCCCCEEEECCCCCCCH--HHHHHHHHCCCCEEEECC
Q ss_conf 98-----9999999753972999737610032--789999862886896036
Q gi|254780742|r 69 NI-----KAVVELIKKTNSQIIINVGSSFLNM--SVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 69 d~-----~~l~~~~~~~~~dvVin~~~p~~~~--~v~~a~i~~g~hyvD~s~ 113 (419)
++ +.|...++ +.|+||.+-.-++.. ...+.|-+.|+||+|+.-
T Consensus 82 ~~Vd~vi~~L~~~L~--~GDIIID~GNs~~~dt~rr~~~l~~kgI~fld~GV 131 (474)
T PTZ00142 82 EAVDEFIDNILPHLE--KGDIIIDGGNEWYNNSERRIKLCKEKGILYIGMGV 131 (474)
T ss_pred HHHHHHHHHHHHCCC--CCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCC
T ss_conf 259999999985088--99989879988865799999999857991864788
No 238
>KOG1201 consensus
Probab=98.00 E-value=7.4e-05 Score=51.55 Aligned_cols=92 Identities=22% Similarity=0.304 Sum_probs=75.2
Q ss_pred CCEEEEECCC-HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 7319998498-779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGAG-GVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~GaG-~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.+.|||-|+| +.|+.++..++++.. .+++.|.|.+-.++.++++.+. .+....++|++|.+++.++.++.
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg~---~~vl~Din~~~~~etv~~~~~~------g~~~~y~cdis~~eei~~~a~~V 108 (300)
T KOG1201 38 GEIVLITGGGSGLGRLIALEFAKRGA---KLVLWDINKQGNEETVKEIRKI------GEAKAYTCDISDREEIYRLAKKV 108 (300)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHCC---EEEEEECCCCCHHHHHHHHHHC------CCEEEEEECCCCHHHHHHHHHHH
T ss_conf 98899968986078999999997078---4899955651239999999844------85258995589889999999999
Q ss_pred -----CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf -----972999737610032789999862886896036
Q gi|254780742|r 81 -----NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 81 -----~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~ 113 (419)
..|++||-+| +-.+.+..+.++
T Consensus 109 k~e~G~V~ILVNNAG-----------I~~~~~ll~~~d 135 (300)
T KOG1201 109 KKEVGDVDILVNNAG-----------IVTGKKLLDCSD 135 (300)
T ss_pred HHHCCCCEEEEECCC-----------CCCCCCCCCCCH
T ss_conf 986199549983664-----------244887567998
No 239
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=98.00 E-value=6.4e-05 Score=51.96 Aligned_cols=76 Identities=12% Similarity=0.206 Sum_probs=39.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
|+|+|+|+|.+|..+|+.|.+ + .+++|-++|+++|++++++++ +..+.+-|..|++-|.+.=-. .+
T Consensus 233 ~~v~I~Ggg~ig~~la~~L~~--~--~~v~iIe~d~~~~~~la~~l~---------~~~Vi~GD~td~~~L~e~gi~-~a 298 (455)
T PRK09496 233 KRIMIAGGGNIGLYLAKLLEK--G--YSVKLIERDPERAEELAEELP---------NTLVLHGDGTDQELLEEEGID-EA 298 (455)
T ss_pred CEEEEECCCHHHHHHHHHHHC--C--CEEEEECCCHHHHHHHHHHCC---------CCEEEECCCCCHHHHHHHCCC-CC
T ss_conf 518998786999999998740--8--838997089899999997478---------539997887688999763645-56
Q ss_pred CEEEECCCCC
Q ss_conf 2999737610
Q gi|254780742|r 83 QIIINVGSSF 92 (419)
Q Consensus 83 dvVin~~~p~ 92 (419)
|++|.+.+..
T Consensus 299 D~~ia~T~~D 308 (455)
T PRK09496 299 DAFIALTNDD 308 (455)
T ss_pred CEEEEECCCH
T ss_conf 4899903881
No 240
>PRK09730 hypothetical protein; Provisional
Probab=98.00 E-value=0.00011 Score=50.27 Aligned_cols=83 Identities=18% Similarity=0.284 Sum_probs=64.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-87799999999960898725999-63999999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINI-ASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~v-a~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.+||-|+ +++|+.+++.|++..- ++++ ..++.++++++.+++.... .+....++|+.|.+++.+++.+.
T Consensus 2 KValITGas~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~Dv~~~~~v~~~~~~i 73 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY---TVAVNYQQNLHAAQEVVNLITQAG-----GKAFVLQADISDENQVVAMFTAI 73 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHH
T ss_conf 7999906226999999999998799---999966998789999999999749-----92899982589999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-.+
T Consensus 74 ~~~~g~id~LVNNAG~~~ 91 (247)
T PRK09730 74 DQHDEPLAALVNNAGILF 91 (247)
T ss_pred HHHCCCCEEEEECCCCCC
T ss_conf 997599559998986356
No 241
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.99 E-value=5.8e-05 Score=52.25 Aligned_cols=73 Identities=10% Similarity=0.144 Sum_probs=59.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|++..- ++++.|++.++.+ ..++...++|+.|.+++.+++.+.
T Consensus 10 KvalVTGgs~GIG~aia~~la~~Ga---~V~~~d~~~~~~~--------------~~~~~~~~~Dvt~~~~v~~~v~~~~ 72 (266)
T PRK06171 10 KIIIVTGGSSGIGLAIVEELLAQGA---NVQMVDIHGGDEK--------------HKGYQFWPTDISSAKEVNHTVAEII 72 (266)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHCC--------------CCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9799947787899999999998799---9999978853505--------------8976999816999999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 73 ~~~G~iDiLVNNAGi~ 88 (266)
T PRK06171 73 ERFGRIDGLVNNAGIN 88 (266)
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9839988999888667
No 242
>PRK07589 ornithine cyclodeaminase; Validated
Probab=97.99 E-value=0.00022 Score=48.32 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=76.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+.+.|+|+|..+..-+..+..-.+. .+|.|.|||+++++++++++.. ..+++..+ .+ +.+.++ ++
T Consensus 130 ~~l~iIGtG~QA~~Q~~A~~~vr~i-~~V~v~~r~~~~a~~~a~~l~~-------~g~~v~~~--~s---~~eAv~--~A 194 (346)
T PRK07589 130 RTMALIGNGAQSEFQALAFKALLGI-EEIRLYDIDPAATAKLARNLAG-------PGLRIVRC--RS---VAEAVE--GA 194 (346)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHH-------CCCEEEEE--CC---HHHHHH--CC
T ss_conf 7699974708899999999985898-6899982887999999999872-------69808994--99---999972--19
Q ss_pred CEEEECCCCCCCHHHH-HHHHHCCCCEEEECCCCCCHHC
Q ss_conf 2999737610032789-9998628868960366420000
Q gi|254780742|r 83 QIIINVGSSFLNMSVL-RACIDSNVAYIDTAIHESPLKI 120 (419)
Q Consensus 83 dvVin~~~p~~~~~v~-~a~i~~g~hyvD~s~~~~~~~~ 120 (419)
|||+.|.+.....+++ ...+..|+|.--+..+.+-.++
T Consensus 195 DIIvTaT~s~~~~Pil~~~~v~pGtHInaVGad~Pgk~E 233 (346)
T PRK07589 195 DIITTVTADKANATILTPDMIEPGMHINAVGGDCPGKTE 233 (346)
T ss_pred CEEEEECCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCC
T ss_conf 888871147788860238775999579852799998530
No 243
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.97 E-value=0.00017 Score=49.04 Aligned_cols=81 Identities=12% Similarity=0.166 Sum_probs=59.7
Q ss_pred CEEEEECCC---HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 319998498---77999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 3 KNVLIIGAG---GVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 3 k~ilv~GaG---~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|++||.|++ ++|..+++.|++..- ++++.+|+...++++.+ +..... .. ...++|+.|.+++.+++..
T Consensus 8 K~alITGaa~~~GIG~aiA~~La~~GA---~V~i~~~~e~~~~~~~~-~~~~~g----~~-~~~~~Dvsd~~~v~~~v~~ 78 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQGA---ELAFTYQGDALGKRVKP-LAESLG----SD-LVLPCDVEDIASVDAVFEA 78 (271)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHH-HHHHCC----CC-EEEECCCCCHHHHHHHHHH
T ss_conf 979997999985499999999998699---99998186688999999-999649----81-8998379999999999999
Q ss_pred C-----CCCEEEECCCCC
Q ss_conf 3-----972999737610
Q gi|254780742|r 80 T-----NSQIIINVGSSF 92 (419)
Q Consensus 80 ~-----~~dvVin~~~p~ 92 (419)
. +.|++||+++..
T Consensus 79 ~~~~~G~iDiLVnnAG~~ 96 (271)
T PRK06505 79 LEKKWGKLDFVVHAIGFS 96 (271)
T ss_pred HHHHHCCCCEEEECCCCC
T ss_conf 999839987898566446
No 244
>PRK06128 oxidoreductase; Provisional
Probab=97.96 E-value=0.00012 Score=50.18 Aligned_cols=82 Identities=20% Similarity=0.287 Sum_probs=61.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCH--HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 31999849-8779999999996089872599963999--99999998734302455555730899437898999999975
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTL--QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.+||-|+ .++|+.++..|++..- +++|.+++. ..++++++.+... ..+...+..|+.|.+.+.+++..
T Consensus 56 KvAlVTGgssGIG~AiA~~lA~eGA---~Vvi~~~~~~~~~a~~~~~~i~~~-----G~~a~~v~~Dvsd~~~~~~~v~~ 127 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREGA---DIVLNYLPEEEQDAAEVVQLIQAE-----GRKAVAVPGDLKDEAFCRQLVER 127 (300)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCCHHHHHHHHHHHHHC-----CCEEEEEECCCCCHHHHHHHHHH
T ss_conf 9589917366999999999998699---999942995567899999999965-----98189997478999999999999
Q ss_pred C-----CCCEEEECCCCC
Q ss_conf 3-----972999737610
Q gi|254780742|r 80 T-----NSQIIINVGSSF 92 (419)
Q Consensus 80 ~-----~~dvVin~~~p~ 92 (419)
. +.|++||.+|..
T Consensus 128 ~~~~~G~iDiLVNNAG~~ 145 (300)
T PRK06128 128 AVKELGGLDILVNIAGKQ 145 (300)
T ss_pred HHHHHCCCCEEEECCCCC
T ss_conf 999809999899899997
No 245
>pfam04321 RmlD_sub_bind RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide.
Probab=97.96 E-value=0.00013 Score=49.82 Aligned_cols=58 Identities=19% Similarity=0.414 Sum_probs=47.6
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 999849-8779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 5 VLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 5 ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
|||.|+ |.+|+.+++.|.++.. +++..+|. .+|+.|.+.+.+++++.++|
T Consensus 1 ILVtG~~GfiGs~l~~~L~~~g~---~v~~~~r~--------------------------~~D~~d~~~l~~~~~~~~pd 51 (284)
T pfam04321 1 ILVTGANGQLGRELTRLLAERGV---EVVALDRP--------------------------ELDLTDPEAVAALVREARPD 51 (284)
T ss_pred EEEECCCCHHHHHHHHHHHHCCC---EEEEECCC--------------------------CCCCCCHHHHHHHHHHCCCC
T ss_conf 69964899899999999986899---89995486--------------------------25788999999999864997
Q ss_pred EEEECCCC
Q ss_conf 99973761
Q gi|254780742|r 84 IIINVGSS 91 (419)
Q Consensus 84 vVin~~~p 91 (419)
+|||++..
T Consensus 52 ~VihlAa~ 59 (284)
T pfam04321 52 VVVNAAAY 59 (284)
T ss_pred EEEECCCC
T ss_conf 99972413
No 246
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=97.96 E-value=0.00013 Score=50.01 Aligned_cols=86 Identities=16% Similarity=0.199 Sum_probs=62.5
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 1999849-877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+|||+|+ |.+|+.+.+.|....+ +...+++... ...|+.|.+++.+++.++++
T Consensus 2 kILvtGa~GqLG~~l~~~l~~~~~----~~~~~~~~~~----------------------~~~Dit~~~~v~~~~~~~~P 55 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLGN----LIALDVHSTD----------------------YCGDFSNPEGVAETVRKIRP 55 (299)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC----EEEEECCCCC----------------------CCCCCCCHHHHHHHHHHCCC
T ss_conf 799989999789999998665098----8998526300----------------------13678999999999996599
Q ss_pred CEEEECCCCCC-C-----------------HHHHHHHHHCCCCEEEECCCC
Q ss_conf 29997376100-3-----------------278999986288689603664
Q gi|254780742|r 83 QIIINVGSSFL-N-----------------MSVLRACIDSNVAYIDTAIHE 115 (419)
Q Consensus 83 dvVin~~~p~~-~-----------------~~v~~a~i~~g~hyvD~s~~~ 115 (419)
|+||||+.... + ..++++|.+.|+.+|-+|-+-
T Consensus 56 d~IIN~aA~T~VD~~E~~~~~a~~vN~~~~~~La~~~~~~~~~lIhiSTD~ 106 (299)
T PRK09987 56 DVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDY 106 (299)
T ss_pred CEEEECHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCE
T ss_conf 999988310163665248999999888999999999997398599963211
No 247
>pfam02423 OCD_Mu_crystall Ornithine cyclodeaminase/mu-crystallin family. This family contains the bacterial Ornithine cyclodeaminase enzyme EC:4.3.1.12, which catalyses the deamination of ornithine to proline. This family also contains mu-Crystallin the major component of the eye lens in several Australian marsupials, mRNA for this protein has also been found in human retina.
Probab=97.95 E-value=0.00019 Score=48.82 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=76.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+.+.|+|+|..++.-++.+..-.+ ..++.|.+|++++++++++++... .+++..+ .|. .+.++ ++
T Consensus 130 ~~l~iiGaG~QA~~~l~al~~v~~-i~~v~v~~r~~~~~~~f~~~~~~~-------~~~v~~~--~~~---~~av~--~A 194 (312)
T pfam02423 130 STLAIIGAGAQAEFQAEALSAVLP-IEEIRIYDRDPEAAEKFARNLQGK-------GFEIVAC--TSA---EEAVE--GA 194 (312)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHC-------CCCEEEE--CCH---HHHHH--CC
T ss_conf 579996462538999999996199-768999968989999999999834-------9965994--899---99971--49
Q ss_pred CEEEECCCCCCCHHHH-HHHHHCCCCEEEECCCCCCHHCC
Q ss_conf 2999737610032789-99986288689603664200001
Q gi|254780742|r 83 QIIINVGSSFLNMSVL-RACIDSNVAYIDTAIHESPLKIC 121 (419)
Q Consensus 83 dvVin~~~p~~~~~v~-~a~i~~g~hyvD~s~~~~~~~~~ 121 (419)
|+||.+.+... .+++ ...+..|+|..-+..+.+..+++
T Consensus 195 DIIvtaT~s~~-~P~~~~~~l~~G~hv~~vGs~~p~~~El 233 (312)
T pfam02423 195 DIVVTVTPDKE-FPILKAEWVKPGVHINAVGADCPGKTEL 233 (312)
T ss_pred CEEEEEECCCC-CCCCCHHHCCCCCEEEEECCCCCCCCCC
T ss_conf 98999735997-7500778838986899726999970436
No 248
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.95 E-value=0.00015 Score=49.43 Aligned_cols=80 Identities=14% Similarity=0.209 Sum_probs=60.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECC-HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 731999849-877999999999608987259996399-999999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRT-LQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
.|.+||-|+ +++|+.+++.|++... ++++.+|+ .++++++++++. .+.-..++|+.|.+++.+++++
T Consensus 6 gK~alVTGas~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~g--------~~~~~~~~Dv~~~~~~~~~v~~ 74 (254)
T PRK08642 6 EQIVLVTGGSRGLGAAIARAFAREGA---RVVVNYHRSEDAAEALADELG--------DRAIAIQADVTDRNQVDAMFAT 74 (254)
T ss_pred CCEEEEECHHHHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHC--------CCEEEEEECCCCHHHHHHHHHH
T ss_conf 89999978111999999999998799---999961898899999999819--------9469998069999999999999
Q ss_pred C-----C-CCEEEECCCCC
Q ss_conf 3-----9-72999737610
Q gi|254780742|r 80 T-----N-SQIIINVGSSF 92 (419)
Q Consensus 80 ~-----~-~dvVin~~~p~ 92 (419)
. + .|++||.++..
T Consensus 75 ~~~~~G~~idilVnnA~~~ 93 (254)
T PRK08642 75 ATEHFGKPITTVVNNALAD 93 (254)
T ss_pred HHHHHCCCCEEEEECCEEC
T ss_conf 9999499776998676422
No 249
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.95 E-value=0.00015 Score=49.58 Aligned_cols=85 Identities=11% Similarity=0.221 Sum_probs=61.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHH-HHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 731999849-87799999999960898725999639999-9999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQ-KCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
.|.|||.|| .++|..+++.++++... ++++++|+.+ +++..++++.... ...+....+|+.|.++..++++.
T Consensus 8 ~KtvlITGassGIG~a~a~~~~~~g~~--~v~l~~r~~~~~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~~~~~i~~ 81 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLRNAPA--RVVLAALPDDPRRDAAVAQMKAAG----ASSVEVIDFDALDTDSHPKVIDA 81 (253)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCC--EEEEEECCCCHHHHHHHHHHHHCC----CCEEEEEECCCCCHHHHHHHHHH
T ss_conf 998999356509999999999974989--899997897326999999998549----97189995566798999999999
Q ss_pred ----CCCCEEEECCCCC
Q ss_conf ----3972999737610
Q gi|254780742|r 80 ----TNSQIIINVGSSF 92 (419)
Q Consensus 80 ----~~~dvVin~~~p~ 92 (419)
.+.|++++++|..
T Consensus 82 ~~~~~~idv~i~~aG~~ 98 (253)
T PRK07904 82 AFAGGDVDVAIVAFGLL 98 (253)
T ss_pred HHHCCCEEEEEECCCCC
T ss_conf 98549935999624456
No 250
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.95 E-value=8.2e-05 Score=51.24 Aligned_cols=94 Identities=20% Similarity=0.206 Sum_probs=65.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 97319998498779999999996089-87259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNND-ILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~-~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.|+|.++|||.||++++.-|.+..- ...++++.+|+.++++.+.++.. +... .|.. ++++
T Consensus 1 M~kkI~fIG~GnMg~Aii~Gl~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----------~~~~----~~~~---e~~~- 62 (272)
T PRK12491 1 MNKQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYG----------ITIT----TNNN---EVAN- 62 (272)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCC----------CEEE----CCHH---HHHH-
T ss_conf 99869998567999999999997889896769996979999999999719----------7886----6879---9973-
Q ss_pred CCCCEEEECCCCCCCHHHHHHH---HHCCCCEEEECC
Q ss_conf 3972999737610032789999---862886896036
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRAC---IDSNVAYIDTAI 113 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~---i~~g~hyvD~s~ 113 (419)
++|+|+-|+-|..-..|++.. +..+...|.+..
T Consensus 63 -~~Dii~LaVKP~~~~~vl~~l~~~~~~~~lviSi~A 98 (272)
T PRK12491 63 -SADILILSIKPDLYSSVINQIKDQIKNDVIVVTIAA 98 (272)
T ss_pred -HCCEEEEEECHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf -199999995778999999998655269918999848
No 251
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.95 E-value=0.00015 Score=49.52 Aligned_cols=102 Identities=23% Similarity=0.274 Sum_probs=75.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+.+.|+|+|..++.-++.+.+-.+. .++.|.+|++++++++++++.... .+++..+ .+.+ +.++ ++
T Consensus 128 ~~l~iiGaG~QA~~~~~a~~~v~~i-~~v~v~~r~~~~~~~f~~~~~~~~------g~~v~~~--~~~~---~av~--~a 193 (325)
T PRK08618 128 KTLCLIGTGGQAKGQLEAVLAVRDI-EKVRVYSRTFEKAYAFAQEIQSKF------NTEIYVV--ESAD---EAIE--EA 193 (325)
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCC-CEEEEEECCHHHHHHHHHHHHHHC------CCCEEEE--CCHH---HHHH--HC
T ss_conf 5699975607999999999860896-689999479999999999998750------9966995--8999---9984--39
Q ss_pred CEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHC
Q ss_conf 29997376100327899998628868960366420000
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKI 120 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~ 120 (419)
|+|+.+.+.. .+++...+..|+|..-+..+.+.+++
T Consensus 194 DiV~taT~s~--~Pv~~~~l~~g~hi~aiGs~~p~~~E 229 (325)
T PRK08618 194 DIIVTVTNAK--TPVFSEKLKKGVHINAVGSFRPDMQE 229 (325)
T ss_pred CEEEEECCCC--CCCCCCCCCCCEEECCCCCCCCCCCC
T ss_conf 8899925999--86445435887175132468986345
No 252
>pfam01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family. The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones.
Probab=97.94 E-value=9.8e-05 Score=50.72 Aligned_cols=76 Identities=8% Similarity=0.219 Sum_probs=54.6
Q ss_pred EEEC-CCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE
Q ss_conf 9984-987799999999960898725999639999999999873430245555573089943789899999997539729
Q gi|254780742|r 6 LIIG-AGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQI 84 (419)
Q Consensus 6 lv~G-aG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dv 84 (419)
||.| +|++|+.+++.|.++.+. .++.+.|++.... ..+.+ .....+...+.|+.|.+.+.++++ ++|+
T Consensus 1 LVTGg~GFIGs~lv~~Ll~~g~~-~~V~~~d~~~~~~--~~~~~------~~~~~~~~v~gDl~d~~~l~~~~~--~~D~ 69 (280)
T pfam01073 1 LVTGGGGFLGRHIVRLLLREGEL-QEVRVFDLRFSPE--LLEDF------SKLQVITYIEGDVTDKQDLRRALQ--GSDV 69 (280)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCC-CEEEEEECCCCHH--HHHHH------CCCCCCEEEECCCCCHHHHHHHHH--CCCE
T ss_conf 90586759999999999977997-5799987889867--88873------225887599912899999999984--7998
Q ss_pred EEECCCCC
Q ss_conf 99737610
Q gi|254780742|r 85 IINVGSSF 92 (419)
Q Consensus 85 Vin~~~p~ 92 (419)
|++++...
T Consensus 70 V~H~Aa~~ 77 (280)
T pfam01073 70 VIHTAAII 77 (280)
T ss_pred EEEECCCC
T ss_conf 99721223
No 253
>PRK08264 short chain dehydrogenase; Validated
Probab=97.94 E-value=8.9e-05 Score=51.01 Aligned_cols=75 Identities=19% Similarity=0.243 Sum_probs=59.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||.|+ .++|+.+++.|+++... .+.++.|+.+.++ .+++...++|+.|++++.++++..
T Consensus 5 gK~alITGassGIG~aiA~~la~~Ga~--~V~~~~r~~~~~~--------------~~~~~~~~~Dv~d~~~v~~~~~~~ 68 (235)
T PRK08264 5 GKVVLVTGANRGIGRAFVEELLARGAA--KVYAAARDPESVD--------------LPRVVPLQLDVTDPASVAAAAEQA 68 (235)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCC--EEEEECCCHHHCC--------------CCCEEEEEECCCCHHHHHHHHHHC
T ss_conf 988999267549999999999986997--7999727840355--------------598799980689999999999973
Q ss_pred -CCCEEEECCCCC
Q ss_conf -972999737610
Q gi|254780742|r 81 -NSQIIINVGSSF 92 (419)
Q Consensus 81 -~~dvVin~~~p~ 92 (419)
..|++||++|-.
T Consensus 69 ~~idvlVnNAGi~ 81 (235)
T PRK08264 69 SDVTILINNAGIS 81 (235)
T ss_pred CCCCEEEECCCCC
T ss_conf 9986999888557
No 254
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.93 E-value=0.0002 Score=48.64 Aligned_cols=86 Identities=19% Similarity=0.199 Sum_probs=62.3
Q ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCCCCEEEEEECCH-----------HHHHHHHHHHHHHCCCCCCCCCEEEEEC
Q ss_conf 97319998498---779999999996089872599963999-----------9999999873430245555573089943
Q gi|254780742|r 1 MKKNVLIIGAG---GVAHVVAHKCAQNNDILGDINIASRTL-----------QKCSKIIDSIYKKKSLKIDGKLAIHQVD 66 (419)
Q Consensus 1 M~k~ilv~GaG---~vG~~~~~~L~~~~~~~~~i~va~r~~-----------~~~~~~~~~l~~~~~~~~~~~~~~~~~D 66 (419)
|.|.+||-|++ ++|+.+++.|++..- ++++.+|+. ..++.+.+.+.. ...++...++|
T Consensus 4 ~gKvalVTGasr~~GIG~aiA~~la~~Ga---~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~D 75 (257)
T PRK12748 4 MKKIAIVTGASRLNGIGAAICRVLAQKGI---DIFFTYWSQYDKAMPWGMHDKEPFLLKEEIES-----YGVRCEMLEID 75 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEECCCHHHHHHHHCCCHHHHHHHHHHHHH-----CCCEEEEEECC
T ss_conf 99889992889998549999999998799---99997075255443423460679999999996-----59828999846
Q ss_pred CCCHHHHHHHHHHC-----CCCEEEECCCCCCC
Q ss_conf 78989999999753-----97299973761003
Q gi|254780742|r 67 ALNIKAVVELIKKT-----NSQIIINVGSSFLN 94 (419)
Q Consensus 67 ~~d~~~l~~~~~~~-----~~dvVin~~~p~~~ 94 (419)
+.+.++..++++.. +.|++||.++....
T Consensus 76 vs~~~~~~~~~~~~~~~~G~iDiLVnnAg~~~~ 108 (257)
T PRK12748 76 LSQSYSPNRLFYMVSERLGDPSILINNAAYSTH 108 (257)
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
T ss_conf 899999999999999974999899989988999
No 255
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.93 E-value=0.00019 Score=48.83 Aligned_cols=82 Identities=18% Similarity=0.204 Sum_probs=63.7
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECC-HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-877999999999608987259996399-9999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRT-LQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.+||-|+ +++|+.++..|++..- ++++.|++ .+.++++++++... ..+......|+.|.+...++++..
T Consensus 10 KvalVTGas~GIGraiA~~lA~~GA---~Vvi~d~~~~~~~~~~~~ei~~~-----G~~~~~~~~Dvsd~~~v~~lv~~~ 81 (303)
T PRK07792 10 KVAVVTGAAAGLGRAEALGLARLGA---TVVVNDIASALDASDVLDEIRAA-----GAKAVAVAGDISQRATADELVATA 81 (303)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 9899928866899999999998699---99997189724799999999844-----993899966768999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 82 ~~~G~iDiLVNNAGi~ 97 (303)
T PRK07792 82 DGLGGLDIVVNNAGIT 97 (303)
T ss_pred HHHCCCCEEEECCCCC
T ss_conf 9839996999888556
No 256
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.93 E-value=0.00018 Score=48.95 Aligned_cols=79 Identities=9% Similarity=0.114 Sum_probs=59.0
Q ss_pred CEEEEECCC---HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 319998498---77999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 3 KNVLIIGAG---GVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 3 k~ilv~GaG---~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.+||.|++ ++|..+++.|++..- ++++.+|+.+..+.+.+.. ..+....++|+.|.+++.++++.
T Consensus 8 K~~lVTGaag~~GIG~a~A~~la~~Ga---~Vv~~~~~~~~~~~~~~~~--------~~~~~~~~~Dvs~~~~v~~~~~~ 76 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQGA---TVIYTYQNDRMKKSLQKLV--------DEEDLLVECDVASDESIERAFAQ 76 (252)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHC--------CCCCEEEEEECCCHHHHHHHHHH
T ss_conf 889998999987799999999998699---9999848879999999850--------88865999518999999999999
Q ss_pred C-----CCCEEEECCCCC
Q ss_conf 3-----972999737610
Q gi|254780742|r 80 T-----NSQIIINVGSSF 92 (419)
Q Consensus 80 ~-----~~dvVin~~~p~ 92 (419)
. +.|++||.++..
T Consensus 77 ~~~~~G~iD~lVnnag~~ 94 (252)
T PRK06079 77 IKERFGKIDGIVHAIAYA 94 (252)
T ss_pred HHHHHCCCCEEEEEEECC
T ss_conf 999868887344332025
No 257
>PRK06270 homoserine dehydrogenase; Provisional
Probab=97.93 E-value=0.00011 Score=50.36 Aligned_cols=153 Identities=16% Similarity=0.150 Sum_probs=90.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-------CCC-EEEEEECC----------HHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 97319998498779999999996089-------872-59996399----------9999999987343024555557308
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNND-------ILG-DINIASRT----------LQKCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~-------~~~-~i~va~r~----------~~~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
|+-+|.++|+|.||+.+++.|.++.+ ... -+.|++++ .+.+....++-... . ....
T Consensus 1 m~i~I~l~G~G~VG~~~~~~l~~~~~~l~~~~g~~l~v~~i~~s~~~~~~~~gid~~~~~~~~~~~~~~---~---~~~~ 74 (342)
T PRK06270 1 MEMKIALVGFGGVGQGLAELLAMKNEYLKKEYGLDLKVVAIADSSGAAIDPNGLDLELALKVKEETGKL---A---DYPE 74 (342)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC---C---CCCC
T ss_conf 963199987688999999999987999999849978999999165433576678989998766411650---0---0320
Q ss_pred EEECCCCHHHHHHHHHHCCCCEEEECCCCCC-----CHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHH
Q ss_conf 9943789899999997539729997376100-----32789999862886896036642000014420000357751088
Q gi|254780742|r 63 HQVDALNIKAVVELIKKTNSQIIINVGSSFL-----NMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDE 137 (419)
Q Consensus 63 ~~~D~~d~~~l~~~~~~~~~dvVin~~~p~~-----~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~ 137 (419)
... ..+ ..++++....|+||.+.+... .....+.++++|+|.|...= ..+.....+|.+.
T Consensus 75 ~~~-~~~---~~~~~~~~~~dvvve~t~~~~~~~e~a~~~~~~aL~~G~~VVTANK-----------~~la~~~~eL~~l 139 (342)
T PRK06270 75 GGG-EID---GLEVIKSAEADVLVEATPTNIETGEPALSHCRKALERGKHVVTSNK-----------GPLALAYKELKEL 139 (342)
T ss_pred CCC-CCC---HHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCC-----------HHHHHHHHHHHHH
T ss_conf 001-278---9998427799989993044677748899999999977994999887-----------1789889999999
Q ss_pred HHHCCCEEEECCCHHHHHHHHHHHHHHHHH--CCCCCEEEEE
Q ss_conf 885188699537501114889999999974--3666389763
Q gi|254780742|r 138 CRTKSITAILGAGFDPGVVNAFARLAQDEY--FDKITDIDII 177 (419)
Q Consensus 138 a~~ag~~~i~~~G~~PGl~~lla~~~~~~~--~d~~~~i~~~ 177 (419)
|+++|+.+.-++-+.-|+.=+-. .++. .+++.+|.-.
T Consensus 140 A~~~g~~~~yEasVggGlPiI~~---l~~~l~gd~I~~I~GI 178 (342)
T PRK06270 140 AKENGVCFRYEATVGGAMPIIRL---AKETLAGNDIKSIKGI 178 (342)
T ss_pred HHHCCCEEEEEEEECCCCCCHHH---HHHHCCCCCCCEEEEE
T ss_conf 99729849985441115353898---9853078884589988
No 258
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.92 E-value=0.00019 Score=48.73 Aligned_cols=85 Identities=8% Similarity=0.157 Sum_probs=63.4
Q ss_pred CCCEE-EEECC-CHHHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 97319-99849-87799999999960898725999-63999999999987343024555557308994378989999999
Q gi|254780742|r 1 MKKNV-LIIGA-GGVAHVVAHKCAQNNDILGDINI-ASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELI 77 (419)
Q Consensus 1 M~k~i-lv~Ga-G~vG~~~~~~L~~~~~~~~~i~v-a~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~ 77 (419)
|++|+ ||-|+ +++|+.+++.|+++.- ++++ .+|+.++..++.+..... ..++...+.|+.|.+++..++
T Consensus 1 L~~KvalVTGgs~GIG~aia~~la~~Ga---~Vv~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dv~~~~~~~~~~ 72 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGF---KVVAGCGPNSPRRVKWLEDQKAL-----GFDFIASEGNVGDWDSTKAAF 72 (246)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCCHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHH
T ss_conf 9509899918586999999999998799---89994799817899999999845-----997899967879999999999
Q ss_pred HHC-----CCCEEEECCCCCC
Q ss_conf 753-----9729997376100
Q gi|254780742|r 78 KKT-----NSQIIINVGSSFL 93 (419)
Q Consensus 78 ~~~-----~~dvVin~~~p~~ 93 (419)
.+. +.|++||.+|-..
T Consensus 73 ~~i~~~~g~idiLVNNAG~~~ 93 (246)
T PRK12938 73 DKVKAEVGEIDVLVNNAGITR 93 (246)
T ss_pred HHHHHHCCCCCEEEECCCCCC
T ss_conf 999997599989998988899
No 259
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.92 E-value=0.00029 Score=47.54 Aligned_cols=126 Identities=22% Similarity=0.128 Sum_probs=74.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC-CCCCEEE-EEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 9731999849-877999999999608-9872599-963999999999987343024555557308994378989999999
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNN-DILGDIN-IASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELI 77 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~-~~~~~i~-va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~ 77 (419)
|.+||-|+|| |.||+..++.|.++. +. .++. +++++. ..+. .. ... ....++..+.+.+
T Consensus 1 mm~kVaIvGATG~vG~eli~lL~~~~~p~-~~i~~~aS~~s-~G~~--------~~--~~~--~~~~~~~~~~~~~---- 62 (348)
T PRK06598 1 MMYNVGVVGATGMVGSVLLQMLEERDFPV-IEPVFFASSRS-GGKA--------PS--FGG--KTLLVDALDIEDL---- 62 (348)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCCC-CEEEEEECCCC-CCCC--------CE--ECC--CEEEEEECCHHHH----
T ss_conf 98479998984599999999998679996-24999987566-8987--------50--689--5547862785576----
Q ss_pred HHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHC--CCCCCCCHHHHHHHHHHHHHCCCEEEECCC
Q ss_conf 7539729997376100327899998628868960366420000--144200003577510888851886995375
Q gi|254780742|r 78 KKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKI--CESPPWYNNYEWSLLDECRTKSITAILGAG 150 (419)
Q Consensus 78 ~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~--~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G 150 (419)
+ ++|+++.|+|.-.-..++..+.++|+..||+|.+...-.. ..- |.+....+ ..+...++.+-|+|=
T Consensus 63 ~--~~Di~f~a~~~~~s~~~~~~~~~~g~~VIDlSs~fR~~~~vplvv-PEiN~~~i---~~~~~~~iIAnPgC~ 131 (348)
T PRK06598 63 K--GLDIALFSAGGDYSKEVAPKLRAAGGVVIDNASALRMDPDVPLVV-PEVNPDAI---KDALKKGIIANPNCT 131 (348)
T ss_pred H--CCCEEEECCCCHHHHHHHHHHHHCCCEEEECCHHHCCCCCCEEEC-CCCCHHHH---HHCCCCCCEECCCCH
T ss_conf 0--799999868823568888999758989998864310368843764-62078999---734136822388819
No 260
>KOG1200 consensus
Probab=97.91 E-value=8.5e-05 Score=51.15 Aligned_cols=86 Identities=12% Similarity=0.184 Sum_probs=67.2
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 97319998498-77999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGAG-GVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~GaG-~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.|..+|.|++ ++|++++..|+++. .++.|+|++.+.+++.+..|+... .-.....|+.+.++.+.+++.
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~G---arv~v~dl~~~~A~ata~~L~g~~------~h~aF~~DVS~a~~v~~~l~e 83 (256)
T KOG1200 13 MSKVAAVTGGSSGIGRAIAQLLAKKG---ARVAVADLDSAAAEATAGDLGGYG------DHSAFSCDVSKAHDVQNTLEE 83 (256)
T ss_pred HCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHCCCCC------CCCEEEECCCCHHHHHHHHHH
T ss_conf 46224873487507799999997469---679975032244799986268877------652353046757889999999
Q ss_pred C-----CCCEEEECCCCCCCH
Q ss_conf 3-----972999737610032
Q gi|254780742|r 80 T-----NSQIIINVGSSFLNM 95 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~~~ 95 (419)
+ .+++++||+|-.-+.
T Consensus 84 ~~k~~g~psvlVncAGItrD~ 104 (256)
T KOG1200 84 MEKSLGTPSVLVNCAGITRDG 104 (256)
T ss_pred HHHHCCCCCEEEECCCCCCCC
T ss_conf 998429972899757646530
No 261
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=97.90 E-value=0.00022 Score=48.34 Aligned_cols=83 Identities=14% Similarity=0.215 Sum_probs=62.2
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCH---HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 1999849-8779999999996089872599963999---99999998734302455555730899437898999999975
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTL---QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
.+||.|+ |++|+.+++.|+++.. .++++.+|+. ++++...+++... ..++....+|+.|++++.+++..
T Consensus 2 tvlVTGas~GIG~~~a~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~~~~~-----g~~v~~~~~Dv~~~~~~~~~v~~ 74 (180)
T smart00822 2 TYLITGGLGGLGLELARWLAERGA--RHLVLLSRSGPDAPGAAELLAELEAL-----GAEVTVVACDVADRAALAAALAA 74 (180)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--CEEEEEECCCCCHHHHHHHHHHHHHC-----CCEEEEEEECCCCHHHHHHHHHH
T ss_conf 999978787999999999998799--88999868987818899999999956-----99699998026886776667776
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||++|-..
T Consensus 75 ~~~~~g~id~lvn~AG~~~ 93 (180)
T smart00822 75 IPARLGPLRGVIHAAGVLD 93 (180)
T ss_pred HHHHCCCEEEEEEECCCCC
T ss_conf 7997398379994246669
No 262
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.90 E-value=0.00024 Score=48.04 Aligned_cols=82 Identities=12% Similarity=0.223 Sum_probs=59.4
Q ss_pred CEEEEECCC---HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 319998498---77999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 3 KNVLIIGAG---GVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 3 k~ilv~GaG---~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.+||.|++ ++|..+++.|+++.- ++++.+|+.. +.+.++++.... ......++|+.|.+++.++++.
T Consensus 11 K~alITGaag~~GIG~aiA~~la~~GA---~V~i~~~~~~-~~~~~~~l~~~~-----g~~~~~~~Dvtd~~~v~~~v~~ 81 (272)
T PRK08159 11 KRGLILGVANNRSIAWGIAKACRAAGA---ELAFTYQGDA-LKKRVEPLAAEL-----GAFVVGHCDVTDEASIDAVFET 81 (272)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCC---EEEEECCCHH-HHHHHHHHHHHC-----CCEEEEECCCCCHHHHHHHHHH
T ss_conf 999998899986899999999998699---9999748668-999999999864-----9818998378999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||.++...
T Consensus 82 ~~~~~G~iDiLVnnag~~~ 100 (272)
T PRK08159 82 LEKKWGKLDFVVHAIGFSD 100 (272)
T ss_pred HHHHHCCCCEEEECCCCCC
T ss_conf 9998699788985354466
No 263
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.00013 Score=49.87 Aligned_cols=75 Identities=15% Similarity=0.246 Sum_probs=58.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||-|+ +++|+.+++.|++..- ++++.+|+...+. .......++|+.|.+++.++++..
T Consensus 8 ~K~alITGgs~GIG~aia~~la~~Ga---~V~i~~r~~~~~~--------------~~~~~~~~~Dv~~~~~v~~~~~~~ 70 (254)
T PRK07856 8 GRVVLVTGGTRGVGAGISEAFLAAGA---TVVVCGRRAPEVD--------------GRPAEFHACDIRDPDQVAALVDAI 70 (254)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHCC--------------CCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 99899947676899999999998799---9999979855748--------------984399984699999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|-..
T Consensus 71 ~~~~g~iDilVnNAG~~~ 88 (254)
T PRK07856 71 AERHGRLDVLVNNAGGSP 88 (254)
T ss_pred HHHHCCCCEEEECCCCCC
T ss_conf 998099888998898899
No 264
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.89 E-value=0.00022 Score=48.37 Aligned_cols=83 Identities=6% Similarity=0.031 Sum_probs=59.0
Q ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 7319998498---7799999999960898725999639999999999873430245555573089943789899999997
Q gi|254780742|r 2 KKNVLIIGAG---GVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 2 ~k~ilv~GaG---~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
-|.+||.|++ ++|+.+++.|++..- ++++.+|+....+.+.+.+.... ..+....++|+.|.+++.+++.
T Consensus 6 gK~~lVTGaag~rGIG~aiA~~la~~Ga---~Vvi~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dvs~~~~v~~~~~ 78 (256)
T PRK08594 6 GKTYVVMGVANKRSIAWGIARSLHNAGA---KLVFTYAGERLEKEVRELAETLE----QQESLVLPCDVTSDEEITACFE 78 (256)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHC----CCCEEEEECCCCCHHHHHHHHH
T ss_conf 9889998999996399999999998799---99997488066999999998707----9947999913899999999999
Q ss_pred HC-----CCCEEEECCCC
Q ss_conf 53-----97299973761
Q gi|254780742|r 79 KT-----NSQIIINVGSS 91 (419)
Q Consensus 79 ~~-----~~dvVin~~~p 91 (419)
.. +.|+++|+++.
T Consensus 79 ~~~~~~g~id~lv~na~~ 96 (256)
T PRK08594 79 TIKKEVGVIHGVAHCIAF 96 (256)
T ss_pred HHHHHHCCCCEEEEEEEE
T ss_conf 999985886746653210
No 265
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.88 E-value=0.00023 Score=48.21 Aligned_cols=119 Identities=16% Similarity=0.203 Sum_probs=73.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
.+|-+||.|.||.+++..|.+.. .+++|.+|+++|+.+.+..... .. +.++ ++++. .+
T Consensus 1 ~kIafIGLG~MG~pmA~~L~~aG---~~v~v~~r~~~ka~~~~~~~Ga----------~~----a~s~---~eaa~--~a 58 (286)
T COG2084 1 MKIAFIGLGIMGSPMAANLLKAG---HEVTVYNRTPEKAAELLAAAGA----------TV----AASP---AEAAA--EA 58 (286)
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHCCC----------EE----CCCH---HHHHH--HC
T ss_conf 90799857352599999999779---8789980885665689997298----------00----3889---99996--19
Q ss_pred CEEEECCCCCCC-HHHHH---HHH---HCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHH
Q ss_conf 299973761003-27899---998---62886896036642000014420000357751088885188699537501114
Q gi|254780742|r 83 QIIINVGSSFLN-MSVLR---ACI---DSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGV 155 (419)
Q Consensus 83 dvVin~~~p~~~-~~v~~---a~i---~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl 155 (419)
|+||.|++..-+ ..|+. -.+ ..|.-+||.|-.++... .++.+.+++.|..++ ++-+..|.
T Consensus 59 DvVitmv~~~~~V~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a------------~~~a~~~~~~G~~~l-DAPVsGg~ 125 (286)
T COG2084 59 DVVITMLPDDAAVRAVLFGENGLLEGLKPGAIVIDMSTISPETA------------RELAAALAAKGLEFL-DAPVSGGV 125 (286)
T ss_pred CEEEEECCCHHHHHHHHHCCCCHHHCCCCCCEEEECCCCCHHHH------------HHHHHHHHHCCCCEE-ECCCCCCC
T ss_conf 98999617989999998185335333789978998789998999------------999999996698689-46765883
Q ss_pred H
Q ss_conf 8
Q gi|254780742|r 156 V 156 (419)
Q Consensus 156 ~ 156 (419)
.
T Consensus 126 ~ 126 (286)
T COG2084 126 P 126 (286)
T ss_pred H
T ss_conf 1
No 266
>pfam01210 NAD_Gly3P_dh_N NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus. NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain.
Probab=97.88 E-value=8.8e-05 Score=51.05 Aligned_cols=101 Identities=18% Similarity=0.197 Sum_probs=65.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
|+|.|+|+|.+|++.+..|+++.. ++.+.+|+.+.++.+.+...+. .+.+.+..-. ++.-..++.+.++ ++
T Consensus 1 kKI~IiGaG~wGtAla~~la~n~~---~V~l~~r~~~~~~~i~~~~~n~---~~lp~~~l~~-~i~~~~dl~~a~~--~a 71 (159)
T pfam01210 1 KKIAVLGAGSWGTALAKVLARNGH---EVRLWGRDEELIEEINTTRENV---KYLPGIKLPD-NLRATTDLEEAIK--GA 71 (159)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC---EEEEEEECCHHHHHHHHCCCCC---HHCCCCCCCC-CEEECCCHHHHHH--CC
T ss_conf 989999969999999999998799---8999990436667788669782---1047864555-3054288999983--79
Q ss_pred CEEEECCCCCCCHHHHHHHH---HCCCCEEEEC
Q ss_conf 29997376100327899998---6288689603
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACI---DSNVAYIDTA 112 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i---~~g~hyvD~s 112 (419)
|++|-++|+.+-..+++... ..+...|.++
T Consensus 72 diIiiavps~~~~~~~~~i~~~~~~~~~iv~~s 104 (159)
T pfam01210 72 DIIVLAVPSQALREVLKQLKGLLSPGAILVSLT 104 (159)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 899991748899999999986557655688875
No 267
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.88 E-value=9.4e-05 Score=50.84 Aligned_cols=89 Identities=16% Similarity=0.244 Sum_probs=66.0
Q ss_pred EEEEE-CCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 19998-49877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLII-GAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~-GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+|+|+ |.|++|+..++++...+ + ++.|.|||.++++.++++|+.. ...+..++++ ++
T Consensus 2 kI~IIGG~G~MG~~Fa~~f~~sG-y--eV~I~gRd~~k~~~va~~LGv~-----------------~~~~~~e~~~--~a 59 (441)
T PRK08655 2 KISIIGGTGGLGKWFARFLKDKG-Y--EVIVWGRDPKKGKEVAKELGVE-----------------YASDNIDAAK--DG 59 (441)
T ss_pred EEEEEECCCHHHHHHHHHHHHCC-C--EEEEEECCCCHHHHHHHHHCCC-----------------CCCCHHHHHH--CC
T ss_conf 79999479817799999998679-8--8999815731356788873862-----------------2244788972--49
Q ss_pred CEEEECCCCCCCHHHHH-HH--HHCCCCEEEECCC
Q ss_conf 29997376100327899-99--8628868960366
Q gi|254780742|r 83 QIIINVGSSFLNMSVLR-AC--IDSNVAYIDTAIH 114 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~-a~--i~~g~hyvD~s~~ 114 (419)
|+||-++|......|++ .+ +..++=.+|++..
T Consensus 60 dvVIvsVPI~~T~~VI~~laP~l~~~~lL~DitSv 94 (441)
T PRK08655 60 DIVIVSVPINVTEDVIREVAPHVKEGSLLMDVTSV 94 (441)
T ss_pred CEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCC
T ss_conf 99999848899999999974248999699983104
No 268
>PRK07985 oxidoreductase; Provisional
Probab=97.88 E-value=0.00026 Score=47.85 Aligned_cols=83 Identities=17% Similarity=0.222 Sum_probs=61.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEEC--CHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 31999849-87799999999960898725999639--9999999998734302455555730899437898999999975
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASR--TLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.+||-|+ +++|+.+++.|++..- +++|.++ +.+.++++++.+... ..+....+.|+.|.+++.+++++
T Consensus 50 KvalVTGas~GIG~aiA~~lA~~GA---~Vvi~~~~~~~~~a~~~~~~~~~~-----g~~~~~~~~Dvs~~~~v~~lv~~ 121 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGA---DVAISYLPVEEEDAQDVKKIIEEC-----GRKAVLLPGDLSDEKFARSLVHE 121 (294)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHH
T ss_conf 9799917266999999999998799---999942996667899999999972-----99589997678999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||.+|...
T Consensus 122 ~~~~fG~iDiLVnnAG~~~ 140 (294)
T PRK07985 122 AHKALGGLDIMALVAGKQV 140 (294)
T ss_pred HHHHHCCCCEEEEECCCCC
T ss_conf 9998599888998066666
No 269
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.88 E-value=0.00018 Score=48.97 Aligned_cols=75 Identities=12% Similarity=0.168 Sum_probs=58.1
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC--
Q ss_conf 1999849-8779999999996089872599963999999999987343024555557308994378989999999753--
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT-- 80 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-- 80 (419)
||||-|+ +++|+.+++.|++..- ++++.||+.++++..++++. .+...+|+.|++++.+++...
T Consensus 2 ~VlVTGgs~GIG~aiA~~la~~Ga---~V~i~~r~~~~l~~~~~el~----------~~~~~~d~~d~~~~~~~~~~~~~ 68 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH---KVTLVGARRDDLEVAAKELD----------VDAIVCDNTDPASLEEARGLFPH 68 (223)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCC----------CCEEEEECCCHHHHHHHHHHHHH
T ss_conf 399987887999999999998799---99999598789999985348----------76899852788999999999998
Q ss_pred CCCEEEECCCC
Q ss_conf 97299973761
Q gi|254780742|r 81 NSQIIINVGSS 91 (419)
Q Consensus 81 ~~dvVin~~~p 91 (419)
..|+++|....
T Consensus 69 ~~d~lvn~~~~ 79 (223)
T PRK05884 69 HLDTIVNVPAP 79 (223)
T ss_pred HHCCEEEEEEE
T ss_conf 61947884123
No 270
>PRK06199 ornithine cyclodeaminase; Validated
Probab=97.88 E-value=0.00038 Score=46.77 Aligned_cols=100 Identities=16% Similarity=0.148 Sum_probs=68.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+.+.|+|+|..++..++.+....+...++.|-||++++++++++++....+. ..++..+| + ..+.++ ++
T Consensus 156 ~~lgiIG~G~qAr~~l~Al~~vrp~i~~V~V~~r~~~~a~~fa~~~~~~~~~----~~~v~~~~--s---~eeav~--~a 224 (379)
T PRK06199 156 KVVGLVGPGVMGKTIVAAFMAVCPGIDTIKIKGRSQKSLDAFATWVAETYPQ----ITEVVVVD--S---EEEVVR--GS 224 (379)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCC----CCEEEEEC--C---HHHHHH--CC
T ss_conf 7899989639999999999986178888999889999999999999976688----85089829--9---999973--79
Q ss_pred CEEEECCC-----CCCCHHHHHHHHHCCCCEEEECC
Q ss_conf 29997376-----10032789999862886896036
Q gi|254780742|r 83 QIIINVGS-----SFLNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 83 dvVin~~~-----p~~~~~v~~a~i~~g~hyvD~s~ 113 (419)
|||+.|.. |...+-+-...++.|+|..-.+.
T Consensus 225 DIVvtaTs~~~~~ps~~P~~~~~wlkpGahv~~~g~ 260 (379)
T PRK06199 225 DIVTYCTSGEAGDPSAYPYVKREWVKPGAFLLMPAA 260 (379)
T ss_pred CEEEECCCCCCCCCCCCCEECHHHCCCCCEEECCCC
T ss_conf 999977778877777784745999599988945567
No 271
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.88 E-value=0.00026 Score=47.83 Aligned_cols=79 Identities=8% Similarity=0.132 Sum_probs=57.5
Q ss_pred CEEEEECC-CH--HHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 31999849-87--7999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 3 KNVLIIGA-GG--VAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 3 k~ilv~Ga-G~--vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|++||.|+ |+ +|..+++.|++..- ++++.+|+.+ .++.++++.+... ...+.++|+.|++++.++++.
T Consensus 7 K~alVTGaa~g~GIG~aiA~~la~~Ga---~V~i~~~~~~-~~~~~~~~~~~~~-----~~~~~~~Dvt~~~~v~~~~~~ 77 (254)
T PRK07533 7 KRGLVVGIANEQSIAWGCARAFRALGA---ELAVTYLNDK-ARPYVEPLAEELD-----APLLMPLDVREPGQLEAVFAR 77 (254)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCC---EEEEEECCHH-HHHHHHHHHHHCC-----CEEEEEECCCCHHHHHHHHHH
T ss_conf 989996888980899999999998799---9999828877-8999999997459-----818999169999999999999
Q ss_pred C-----CCCEEEECCC
Q ss_conf 3-----9729997376
Q gi|254780742|r 80 T-----NSQIIINVGS 90 (419)
Q Consensus 80 ~-----~~dvVin~~~ 90 (419)
. +.|++||.++
T Consensus 78 ~~~~~G~iDilVnna~ 93 (254)
T PRK07533 78 IAEEWGRLDFVLHSIA 93 (254)
T ss_pred HHHHHCCCCEEEECCC
T ss_conf 9998499778974221
No 272
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=97.87 E-value=0.00028 Score=47.67 Aligned_cols=103 Identities=15% Similarity=0.151 Sum_probs=77.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+.+.|+|+|..++.-++.+..-.+. .+|.|.+|+++.++++++++.+.... ++...++.++.++ ++
T Consensus 131 ~~laiIGaG~qA~~ql~a~~~v~~~-~~I~i~~r~~~~~e~~a~~l~~~~~~-----------~v~a~~s~~~av~--~a 196 (330)
T COG2423 131 STLAIIGAGAQARTQLEALKAVRDI-REIRVYSRDPEAAEAFAARLRKRGGE-----------AVGAADSAEEAVE--GA 196 (330)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCC-CEEEEECCCHHHHHHHHHHHHHHCCC-----------CCEECCCHHHHHH--CC
T ss_conf 5799988848999999999962896-18999768989999999998763386-----------5132368998861--39
Q ss_pred CEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHC
Q ss_conf 29997376100327899998628868960366420000
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKI 120 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~ 120 (419)
|+|+.|.+-.. +-+...=++.|+|..-++.+.+..++
T Consensus 197 DiIvt~T~s~~-Pil~~~~l~~G~hI~aiGad~p~k~E 233 (330)
T COG2423 197 DIVVTATPSTE-PVLKAEWLKPGTHINAIGADAPGKRE 233 (330)
T ss_pred CEEEEECCCCC-CEECHHHCCCCCEEEECCCCCCCCCC
T ss_conf 98999428998-76238665897089703789965242
No 273
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.87 E-value=0.00025 Score=47.93 Aligned_cols=79 Identities=20% Similarity=0.273 Sum_probs=60.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCH----------HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHH
Q ss_conf 31999849-8779999999996089872599963999----------999999987343024555557308994378989
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTL----------QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIK 71 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~----------~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~ 71 (419)
|.+||-|+ .++|+.++..|++... ++++.+|+. +.+++.++.+... ..+.-.+++|+.|.+
T Consensus 9 KvAlVTGasrGIGraiA~~LA~~GA---~V~i~~r~~~~~~~~~~~~e~l~e~a~~i~~~-----Gg~~~~v~~Dvsd~~ 80 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAAGA---TVYVTGRSTRARRSEYDRPETIEETAELVTAA-----GGRGIAVQVDHLVPE 80 (305)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHCCCCCCCHHHHHHHHHHHHHC-----CCEEEEEECCCCCHH
T ss_conf 9899908875899999999998799---89998276110000012067999999999975-----990899975689999
Q ss_pred HHHHHHHHC-----CCCEEEECC
Q ss_conf 999999753-----972999737
Q gi|254780742|r 72 AVVELIKKT-----NSQIIINVG 89 (419)
Q Consensus 72 ~l~~~~~~~-----~~dvVin~~ 89 (419)
++++++... +.|++||-+
T Consensus 81 ~v~~~v~~~~~~~G~lDILVNNa 103 (305)
T PRK08303 81 QVRALVERIDREQGRLDILVNDI 103 (305)
T ss_pred HHHHHHHHHHHHCCCCCEEEECC
T ss_conf 99999999999529620898558
No 274
>TIGR01289 LPOR light-dependent protochlorophyllide reductase; InterPro: IPR005979 This family contains the light-dependent, NADPH-dependent form of protochlorophyllide reductase (1.3.1.33 from EC) which catalyses the reaction chlorophyllide A + NADP+ = protochlorophyllide + NADPH. The enzyme belongs to the short chain alcohol dehydrogenase family. ; GO: 0016630 protochlorophyllide reductase activity, 0015995 chlorophyll biosynthetic process, 0019685 photosynthesis dark reaction, 0009507 chloroplast.
Probab=97.87 E-value=9e-05 Score=50.99 Aligned_cols=85 Identities=21% Similarity=0.300 Sum_probs=71.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
||..|+|-|| -|+|-..|..|+.... ++++.|.||.+|+++.|++++-. .+..++.++|...-+++++++.+
T Consensus 2 ~K~tviITGASSG~GL~~AKAL~~~G~--WHV~MACR~l~Ka~~aA~~~G~p-----~~sYti~~lDL~~LdSVR~FV~~ 74 (321)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAETGK--WHVVMACRDLLKAEKAAKSLGMP-----KDSYTILHLDLGSLDSVRQFVEQ 74 (321)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCC--EEEEEECCCHHHHHHHHHHCCCC-----CCCCEEEEEHHHHHHHHHHHHHH
T ss_conf 987078863731357899999986398--08998144616889999843888-----66613543013446789999999
Q ss_pred CCC------CEEEECCCCC
Q ss_conf 397------2999737610
Q gi|254780742|r 80 TNS------QIIINVGSSF 92 (419)
Q Consensus 80 ~~~------dvVin~~~p~ 92 (419)
.+. -+|+|++=++
T Consensus 75 Fr~~gr~LdaLVCNAAVy~ 93 (321)
T TIGR01289 75 FRESGRPLDALVCNAAVYL 93 (321)
T ss_pred HHHCCCCCEEEEEHHHHHC
T ss_conf 9860784201342134526
No 275
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.87 E-value=0.00021 Score=48.56 Aligned_cols=76 Identities=16% Similarity=0.202 Sum_probs=59.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.|||.|+ .++|+.+++.|+++.. ++++.+|+.++++++.. + ..+..++|+.|.+++.++....
T Consensus 2 K~~LVTGas~GIG~a~a~~la~~G~---~V~~~~R~~~~l~~l~~-~----------~~~~~~~Dv~d~~~v~~~~~~~~ 67 (222)
T PRK06953 2 KTVLIVGASRGIGLEFVRQYRADGW---RVIATARDAAGLAALRA-L----------GAEALALDVADPESIAGLGWKLD 67 (222)
T ss_pred CEEEECCCCHHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHH-C----------CCCEEEEECCCHHHHHHHHHHHC
T ss_conf 9999947572999999999998889---99999688888999884-2----------15177740589999999998623
Q ss_pred --CCCEEEECCCCC
Q ss_conf --972999737610
Q gi|254780742|r 81 --NSQIIINVGSSF 92 (419)
Q Consensus 81 --~~dvVin~~~p~ 92 (419)
+.|++||.+|-+
T Consensus 68 ~~~ldili~nAGi~ 81 (222)
T PRK06953 68 GEALDAAVYVAGVY 81 (222)
T ss_pred CCCCCEEEEECCCC
T ss_conf 67767899816655
No 276
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=97.86 E-value=0.001 Score=43.80 Aligned_cols=93 Identities=15% Similarity=0.287 Sum_probs=68.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
++|||+|.+.=|+.++..|+.. + .-+.+++..... ..+...++.--..|.+.+.+++++++.
T Consensus 2 ~~IlilgGT~Egr~la~~L~~~-~--~~~s~ag~~~~~---------------~~~~~~i~~G~~~~~~~l~~~l~~~~i 63 (241)
T PRK08057 2 PRILLLGGTSEARALARALAPD-D--TVTSLAGRTLKP---------------ADLPGPVRVGGFGGAEGLAAYLREEGI 63 (241)
T ss_pred CEEEEEECHHHHHHHHHHHHCC-C--EEEEEEEECCCC---------------CCCCCCEEECCCCCHHHHHHHHHHCCC
T ss_conf 6599996708999999997489-9--899985302556---------------568876798888999999999996799
Q ss_pred CEEEECCCCC---CCHHHHHHHHHCCCCEEEECC
Q ss_conf 2999737610---032789999862886896036
Q gi|254780742|r 83 QIIINVGSSF---LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 83 dvVin~~~p~---~~~~v~~a~i~~g~hyvD~s~ 113 (419)
++||++.=|| ....+.++|-+.|++|+-.--
T Consensus 64 ~~VIDATHPfA~~is~~a~~a~~~~~ipylR~eR 97 (241)
T PRK08057 64 DLVVDATHPYAAQISANAAAACRALGIPYLRLER 97 (241)
T ss_pred CEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEC
T ss_conf 8999899970899999999999986970799967
No 277
>PRK06398 aldose dehydrogenase; Validated
Probab=97.85 E-value=0.00013 Score=49.93 Aligned_cols=72 Identities=17% Similarity=0.229 Sum_probs=57.4
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||-|+ +++|+.+++.|+++.. ++++.||+.++.. ...+..++|+.|.+++.+++++.
T Consensus 7 KvalVTGgs~GIG~aia~~la~~Ga---~V~~~~~~~~~~~---------------~~~~~i~~Dvt~~~~v~~~v~~~~ 68 (256)
T PRK06398 7 KVVIVTGGSSGIGLAIVSRFVDEGS---KVVSISRSEPEDI---------------NKSDHIKCDVTNEDEVKNAINEIS 68 (256)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCCC---------------CCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 9899968787899999999998699---9999948751251---------------722389854799999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 69 ~~~G~iDiLVNNAG~~ 84 (256)
T PRK06398 69 KKYGRIDVLVNNAGIE 84 (256)
T ss_pred HHCCCCCEEEECCCCC
T ss_conf 9839997999899999
No 278
>PRK07069 short chain dehydrogenase; Validated
Probab=97.85 E-value=0.00028 Score=47.63 Aligned_cols=83 Identities=14% Similarity=0.194 Sum_probs=61.6
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHH-HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 1999849-877999999999608987259996399999-9999987343024555557308994378989999999753-
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQK-CSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.||-|+ +++|+.+++.|++.. .++++.||+.++ .+.+++.+...... ...-..++|+.|.+++..++++.
T Consensus 1 ~AlVTGgs~GIG~aia~~la~~G---a~V~i~d~~~~~~~~~~~~~l~~~~~~---~~~~~~~~Dv~~~~~v~~~v~~~~ 74 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQG---ARVFLTDINDAAALDAFAAEINAAHGE---GVAFAAVQDVTDEAQWQALLAQAA 74 (251)
T ss_pred CEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCHHHHHHHHHHHHHCCCC---CEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 97998557889999999999869---999999689435899999999861599---639999577999999999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
+.|++||.+|-.
T Consensus 75 ~~~G~iDilVNnAGi~ 90 (251)
T PRK07069 75 DAMGGLSVLVNNAGVG 90 (251)
T ss_pred HHCCCCCEEEECCCCC
T ss_conf 9829998999899999
No 279
>KOG2741 consensus
Probab=97.85 E-value=0.0016 Score=42.58 Aligned_cols=148 Identities=9% Similarity=0.066 Sum_probs=102.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCC--CCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 1999849877999999999608--98725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNN--DILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~--~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
++=+.|+|.+++-.++.|...+ ++ .-+.||+|+.+++.++|.+..-. +.++ ..+..+|.++..
T Consensus 8 r~Gi~g~g~ia~~f~~al~~~p~s~~-~Ivava~~s~~~A~~fAq~~~~~-------~~k~-------y~syEeLakd~~ 72 (351)
T KOG2741 8 RWGIVGAGRIARDFVRALHTLPESNH-QIVAVADPSLERAKEFAQRHNIP-------NPKA-------YGSYEELAKDPE 72 (351)
T ss_pred EEEEEEHHHHHHHHHHHHCCCCCCCC-EEEEEECCCHHHHHHHHHHCCCC-------CCCC-------CCCHHHHHCCCC
T ss_conf 89886046778999997214754582-79999655278899999865999-------8742-------557998824987
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHH
Q ss_conf 72999737610032789999862886896036642000014420000357751088885188699537501114889999
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAFAR 161 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~lla~ 161 (419)
+|+|.-..+-.+|+.++..|++.|+|.+. ..--.+. .....++=+.|+++|+-++-++.+--=+.-.-++
T Consensus 73 vDvVyi~~~~~qH~evv~l~l~~~K~VL~--EKPla~n--------~~e~~~iveaA~~rgv~~meg~~~R~~P~~~~lk 142 (351)
T KOG2741 73 VDVVYISTPNPQHYEVVMLALNKGKHVLC--EKPLAMN--------VAEAEEIVEAAEARGVFFMEGLWWRFFPRYAKLK 142 (351)
T ss_pred CCEEEECCCCCCHHHHHHHHHHCCCCEEE--CCCCCCC--------HHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHH
T ss_conf 68799679980089999999975995786--5655388--------9999999999997694887644421073899999
Q ss_pred HHHH-HHCCCCCEEEE
Q ss_conf 9999-74366638976
Q gi|254780742|r 162 LAQD-EYFDKITDIDI 176 (419)
Q Consensus 162 ~~~~-~~~d~~~~i~~ 176 (419)
..+. +.++++..+.+
T Consensus 143 e~l~~~~~Gdvk~v~~ 158 (351)
T KOG2741 143 ELLSSGVLGDVKSVEV 158 (351)
T ss_pred HHHHCCCCCCCEEEEE
T ss_conf 9971265556248999
No 280
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.84 E-value=0.00034 Score=47.11 Aligned_cols=81 Identities=17% Similarity=0.240 Sum_probs=59.4
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHH-HHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 731999849-87799999999960898725999639999-9999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQ-KCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
.|.+||-|+ +++|+.++..|++..- ++++.+++.. ..++.++.+ ..++...+.|+.|.+++.++++.
T Consensus 8 gKvalVTGas~GIG~aia~~la~~Ga---~Vv~~~~~~~~~~~~~~~~~--------g~~~~~~~~Dv~~~~~~~~~~~~ 76 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGA---DIVGVGVAEAPETQAQVEAL--------GRKFHFITADLIQQKDIDSIVSQ 76 (251)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHC--------CCCEEEEEECCCCHHHHHHHHHH
T ss_conf 99899948676899999999998699---99997898719999999975--------99479999127999999999999
Q ss_pred C-----CCCEEEECCCCCC
Q ss_conf 3-----9729997376100
Q gi|254780742|r 80 T-----NSQIIINVGSSFL 93 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~ 93 (419)
. +.|++||.+|-..
T Consensus 77 ~~~~~g~iDilVNNAG~~~ 95 (251)
T PRK12481 77 AVEVMGHIDILINNAGIIR 95 (251)
T ss_pred HHHHCCCCCEEEECCCCCC
T ss_conf 9998199989998998999
No 281
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.84 E-value=0.00036 Score=46.93 Aligned_cols=80 Identities=11% Similarity=0.169 Sum_probs=58.5
Q ss_pred CEEEEECC-C--HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 31999849-8--77999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 3 KNVLIIGA-G--GVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 3 k~ilv~Ga-G--~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|++||.|+ + ++|+.+++.|++..- ++++.+|+ ++++..++++.... ......++|+.|.+++.+++++
T Consensus 7 K~alVTGaa~~~GiG~aiA~~la~~GA---~V~i~~~~-~~~~~~~~~~~~~~-----~~~~~~~~Dvs~~~~v~~~~~~ 77 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGA---ELAFTYQN-DKLKGRVEEFAAQL-----GSDIVLQCDVAEDASIDAMFAE 77 (262)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCC---EEEEEECC-HHHHHHHHHHHHHC-----CCCEEEECCCCCHHHHHHHHHH
T ss_conf 879998999972599999999998799---99998277-78999999999754-----9828998889999999999999
Q ss_pred C-----CCCEEEECCCC
Q ss_conf 3-----97299973761
Q gi|254780742|r 80 T-----NSQIIINVGSS 91 (419)
Q Consensus 80 ~-----~~dvVin~~~p 91 (419)
. +.|++||.++.
T Consensus 78 ~~~~~g~iD~lVnnag~ 94 (262)
T PRK07984 78 LGKVWPKFDGFVHSIGF 94 (262)
T ss_pred HHHHHCCCCEEEEEECC
T ss_conf 99983877889995022
No 282
>COG4091 Predicted homoserine dehydrogenase [Amino acid transport and metabolism]
Probab=97.83 E-value=0.00083 Score=44.47 Aligned_cols=140 Identities=17% Similarity=0.198 Sum_probs=97.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH----
Q ss_conf 1999849877999999999608987259996399999999998734302455555730899437898999999975----
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK---- 79 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~---- 79 (419)
+|=++|||.+|+.++..+++-+.. .-+.+++|+.+++++..+.... +..++ ++..+..++...+++
T Consensus 19 RVGlIGAG~mG~~ivtQi~~m~Gm-~vvaisd~~~~~ak~A~~~ag~-------~~~~~--~e~~~~s~~a~Ai~aGKi~ 88 (438)
T COG4091 19 RVGLIGAGEMGTGIVTQIASMPGM-EVVAISDRNLDAAKRAYDRAGG-------PKIEA--VEADDASKMADAIEAGKIA 88 (438)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCC-EEEEEECCCCHHHHHHHHHHCC-------CCCCC--CCCCHHHHHHHHHHCCCEE
T ss_conf 998754541106799987506883-6999842464278899987358-------72000--0111166788998628679
Q ss_pred -----------CCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf -----------3972999737610-0327899998628868960366420000144200003577510888851886995
Q gi|254780742|r 80 -----------TNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAIL 147 (419)
Q Consensus 80 -----------~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~ 147 (419)
--.|+||.+.|-. .+..+.-.++++++|.|=+.-+-+.+-- + -|-++|.++|+.--.
T Consensus 89 vT~D~~~i~~~~~IdvIIdATG~p~vGA~~~l~Ai~h~KHlVMmNVEaDvtIG---p--------~Lk~~Ad~~GviyS~ 157 (438)
T COG4091 89 VTDDAELIIANDLIDVIIDATGVPEVGAKIALEAILHGKHLVMMNVEADVTIG---P--------ILKQQADAAGVIYSG 157 (438)
T ss_pred EECCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECEEEC---H--------HHHHHHHHCCEEEEC
T ss_conf 82653543238860499976788530147579998567728999754032534---8--------899877654758854
Q ss_pred CCCHHHHHHHHHHHHHH
Q ss_conf 37501114889999999
Q gi|254780742|r 148 GAGFDPGVVNAFARLAQ 164 (419)
Q Consensus 148 ~~G~~PGl~~lla~~~~ 164 (419)
+.|=.|+.--=|..++.
T Consensus 158 ~~GDeP~~~mEL~efa~ 174 (438)
T COG4091 158 GAGDEPSSCMELYEFAS 174 (438)
T ss_pred CCCCCCHHHHHHHHHHH
T ss_conf 67897177878999998
No 283
>KOG0725 consensus
Probab=97.81 E-value=0.00037 Score=46.81 Aligned_cols=88 Identities=17% Similarity=0.209 Sum_probs=67.9
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||-|+ .++|+.+++.|++... ++++++|+.++++..+..+...... ..+.....+|+.+.+...+++...
T Consensus 8 gkvalVTG~s~GIG~aia~~la~~Ga---~v~i~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725 8 GKVALVTGGSSGIGKAIALLLAKAGA---KVVITGRSEERLEETAQELGGLGYT--GGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHCCCC--CCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 87899979998158999999998799---8999845456667789998743677--761489975557678899999999
Q ss_pred ------CCCEEEECCCCCCC
Q ss_conf ------97299973761003
Q gi|254780742|r 81 ------NSQIIINVGSSFLN 94 (419)
Q Consensus 81 ------~~dvVin~~~p~~~ 94 (419)
+.|++||.++.-..
T Consensus 83 ~~~~~GkidiLvnnag~~~~ 102 (270)
T KOG0725 83 VEKFFGKIDILVNNAGALGL 102 (270)
T ss_pred HHHHCCCCCEEEECCCCCCC
T ss_conf 99847888779872664678
No 284
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.00012 Score=50.21 Aligned_cols=64 Identities=20% Similarity=0.350 Sum_probs=50.7
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-C
Q ss_conf 1999849-8779999999996089872599963999999999987343024555557308994378989999999753-9
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT-N 81 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~ 81 (419)
||||.|+ +++|+.+++.|+++. +++.++|+.. ..++|+.|++++.+++++. +
T Consensus 2 rVlVTGas~GIG~aia~~la~~~----~vv~~~r~~~----------------------~~~~Dvtd~~~v~~~~~~~G~ 55 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSARH----EVITAGRSSG----------------------DVQVDITDPASIRALFEKVGK 55 (199)
T ss_pred EEEEECCCCHHHHHHHHHHHCCC----CEEEEECCCC----------------------CEEEECCCHHHHHHHHHHHCC
T ss_conf 79999987489999999996799----9899836867----------------------756858899999999996299
Q ss_pred CCEEEECCCCCC
Q ss_conf 729997376100
Q gi|254780742|r 82 SQIIINVGSSFL 93 (419)
Q Consensus 82 ~dvVin~~~p~~ 93 (419)
.|++||++|-..
T Consensus 56 iD~lVnnAG~~~ 67 (199)
T PRK07578 56 VDAVVSAAGKVH 67 (199)
T ss_pred CCEEEECCCCCC
T ss_conf 989998872267
No 285
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=97.79 E-value=0.00056 Score=45.63 Aligned_cols=98 Identities=12% Similarity=0.211 Sum_probs=77.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 97319998498779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|..+|+|+|.+.=++.++..|...+....-.+++||..+-++.. ......-..+.+.|+++++..
T Consensus 1 ~~~~ilvlGGT~Dar~la~~L~~~~~~~~~ss~t~~g~~l~~~~---------------~~~~~~G~l~~e~l~~~l~e~ 65 (257)
T COG2099 1 SMMRILLLGGTSDARALAKKLAAAPVDIILSSLTGYGAKLAEQI---------------GPVRVGGFLGAEGLAAFLREE 65 (257)
T ss_pred CCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHCC---------------CCEEECCCCCHHHHHHHHHHC
T ss_conf 98359998263899999998620686179997034442411105---------------886652768878999999974
Q ss_pred CCCEEEECCCCC---CCHHHHHHHHHCCCCEEEECC
Q ss_conf 972999737610---032789999862886896036
Q gi|254780742|r 81 NSQIIINVGSSF---LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 81 ~~dvVin~~~p~---~~~~v~~a~i~~g~hyvD~s~ 113 (419)
+.|+||++.=|| .-.+.+++|-+.|++|+-.--
T Consensus 66 ~i~llIDATHPyAa~iS~Na~~aake~gipy~r~eR 101 (257)
T COG2099 66 GIDLLIDATHPYAARISQNAARAAKETGIPYLRLER 101 (257)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 988899788757999989999999985996799877
No 286
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284 This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis . Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process.
Probab=97.79 E-value=0.00024 Score=48.11 Aligned_cols=142 Identities=17% Similarity=0.198 Sum_probs=91.3
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCCCCEEEEEEC-CHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC--
Q ss_conf 999849-87799999999960898725999639-99999999987343024555557308994378989999999753--
Q gi|254780742|r 5 VLIIGA-GGVAHVVAHKCAQNNDILGDINIASR-TLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT-- 80 (419)
Q Consensus 5 ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-- 80 (419)
.||-|| .++|++||+.|++... ++++.+| +.++++++.+++.... -+.....+|++|.++..+++++.
T Consensus 1 AlVTGasRGIG~AIA~~LA~~Ga---~V~i~y~~~e~~~~~~~~e~~~~G-----~~a~~~~~dvs~~~~~~~~~~~~~~ 72 (238)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA---KVIITYRTSEEGAEEVVEEIKELG-----VKAAGVVLDVSDREDVKALVEEAEE 72 (238)
T ss_pred CEECCCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHCC-----CEEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 96716786167999999986799---599965982578889999998569-----7599996038888999999999999
Q ss_pred --CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHH
Q ss_conf --972999737610032789999862886896036642000014420000357751088885188699537501114889
Q gi|254780742|r 81 --NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNA 158 (419)
Q Consensus 81 --~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~l 158 (419)
+.|++||=+|=.=+. -.++-.+ .+||+- -+.++.-+ ==++--
T Consensus 73 ~~GiDiLVNNAGITrD~--------------------Ll~RMk~---------edWd~V-i~~NL~g~------F~~t~~ 116 (238)
T TIGR01830 73 ELGIDILVNNAGITRDN--------------------LLMRMKE---------EDWDAV-INVNLKGV------FNLTQA 116 (238)
T ss_pred HHCCEEEEECCCCCCCC--------------------HHCCCCH---------HHHHHH-HHHHHHHH------HHHHHH
T ss_conf 82990899787413430--------------------1004885---------568999-98612668------788899
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCCC-CCC
Q ss_conf 99999997436663897630247888866-654
Q gi|254780742|r 159 FARLAQDEYFDKITDIDIIDVNAGKHDKY-FAT 190 (419)
Q Consensus 159 la~~~~~~~~d~~~~i~~~~~~~~~~~~~-~~~ 190 (419)
..+.+++.-++++=.|.+-++..|..++. |+.
T Consensus 117 v~~~M~K~R~GrIINisSVVG~~GN~GQaNYaA 149 (238)
T TIGR01830 117 VLRPMIKQRSGRIINISSVVGLMGNAGQANYAA 149 (238)
T ss_pred HHHHHHHHCCCCEEEEEEHHHHHCCCCHHHHHH
T ss_conf 889887506743486100200006874267888
No 287
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.79 E-value=0.00091 Score=44.18 Aligned_cols=121 Identities=13% Similarity=0.122 Sum_probs=78.7
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
+|=++|.|.||+.++..|+++. .++++-||+.++++++.+. .... +.+.+++.+.+. .++
T Consensus 2 kIGfIGLG~MG~~mA~nL~~~G---~~V~v~d~~~~~~~~~~~~-----------g~~~----~~s~~e~~~~l~--~~~ 61 (298)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDG---HEVVGYDVNQEAVDVAGKL-----------GITA----RHSLEELVSKLE--APR 61 (298)
T ss_pred EEEEECHHHHHHHHHHHHHHCC---CEEEEECCCHHHHHHHHHC-----------CCEE----CCCHHHHHHHCC--CCC
T ss_conf 7999834676899999999779---9489984998999999986-----------9954----289999997378--998
Q ss_pred EEEECCCCCC-CHHHHH---HHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
Q ss_conf 9997376100-327899---9986288689603664200001442000035775108888518869953750111488
Q gi|254780742|r 84 IIINVGSSFL-NMSVLR---ACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVN 157 (419)
Q Consensus 84 vVin~~~p~~-~~~v~~---a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ 157 (419)
+|+.+++.-- -..|+. ..++.|.-.||.+...+.. ..+..++.+++|+. ..+||++.|...
T Consensus 62 vI~~~vp~g~~v~~vi~~l~~~L~~g~iiID~sts~~~~------------t~~~~~~l~~~gi~-flDapVSGG~~G 126 (298)
T PRK12490 62 AIWVMVPAGEVTESVLKDLYPLLSPGDIVIDGGNSRYKD------------DLRRAEELAERGIH-YVDCGTSGGVWG 126 (298)
T ss_pred EEEEECCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHH------------HHHHHHHHHHCCCC-EECCCCCCCHHH
T ss_conf 899976894559999996885269998885288789999------------99999999975990-305535788789
No 288
>TIGR01179 galE UDP-glucose 4-epimerase; InterPro: IPR005886 Synonym: UDP-galactose 4-epimerase UDP-glucose 4-epimerase (5.1.3.2 from EC) interconverts UDP-glucose and UDP-galactose which are precursors of glucose- and galactose-containing exopolysaccharides (EPS). A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded and described by a separate model. ; GO: 0003978 UDP-glucose 4-epimerase activity, 0006012 galactose metabolic process.
Probab=97.79 E-value=0.00015 Score=49.56 Aligned_cols=101 Identities=11% Similarity=0.165 Sum_probs=68.7
Q ss_pred EEEEE-CCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHH-HHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH---
Q ss_conf 19998-4987799999999960898725999639999999-999873430245555573089943789899999997---
Q gi|254780742|r 4 NVLII-GAGGVAHVVAHKCAQNNDILGDINIASRTLQKCS-KIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK--- 78 (419)
Q Consensus 4 ~ilv~-GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--- 78 (419)
+|||- |||.+||.+++.|.+... +|+|-|- +++.. .....+.. ....++..++.|+.|.+.|++++.
T Consensus 1 ~iLVTGGAGYIGSHt~~~Ll~~G~---ev~vlDN-Ls~G~~~~l~~~~~----~~G~~~~fv~gDL~D~~~l~~~f~kqq 72 (341)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGY---EVVVLDN-LSNGSAEALKRGEE----ITGKEVTFVEGDLRDRELLRRVFEKQQ 72 (341)
T ss_pred CEEEEECCCCCHHHHHHHHHHCCC---EEEEEEC-CCCCCHHHHCCCCE----ECCCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 926861466443588788763597---2899815-78884887500234----148532058717515799999987743
Q ss_pred -HCCCCEEEECCCCC------------CCH------HHHHHHHHCCCCEEEEC
Q ss_conf -53972999737610------------032------78999986288689603
Q gi|254780742|r 79 -KTNSQIIINVGSSF------------LNM------SVLRACIDSNVAYIDTA 112 (419)
Q Consensus 79 -~~~~dvVin~~~p~------------~~~------~v~~a~i~~g~hyvD~s 112 (419)
++++|.||+-++-. |+. .++++|.++|+.=+=-|
T Consensus 73 l~~~idAViHFAg~~~VgESv~~Pl~YY~NNv~nTl~L~~~m~~~GV~~~iFS 125 (341)
T TIGR01179 73 LEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVNTLNLLEAMQETGVKKFIFS 125 (341)
T ss_pred HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
T ss_conf 11675467520112125255752454400046899999999998189741530
No 289
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=97.79 E-value=0.0002 Score=48.61 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=75.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+.+.|+|+|..++.-++.+..-.+. .++.|.+|+.++++++++++... ..+++..+ .+. .+.++ ++
T Consensus 119 ~~l~iiG~G~QA~~~~~a~~~v~~i-~~v~v~~r~~~~a~~f~~~~~~~------~~~~v~~~--~~~---e~av~--~a 184 (302)
T PRK06407 119 ENFTIIGSGFQAETQLEGMASVYNP-KRIRVYSRNFDHARAFAERFSKE------FGVDIRPV--DNA---EAALR--DA 184 (302)
T ss_pred CEEEEEEEHHHHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHH------CCCCEEEE--CCH---HHHHH--HC
T ss_conf 7899996659999999999974077-38999808889999999998644------09957994--899---99983--49
Q ss_pred CEEEECCCCCCCHHHH-HHHHHCCCCEEEECCCCCCHHCC
Q ss_conf 2999737610032789-99986288689603664200001
Q gi|254780742|r 83 QIIINVGSSFLNMSVL-RACIDSNVAYIDTAIHESPLKIC 121 (419)
Q Consensus 83 dvVin~~~p~~~~~v~-~a~i~~g~hyvD~s~~~~~~~~~ 121 (419)
|+|+.+.+.. .+++ ...+..|+|..-+..+.+.++++
T Consensus 185 DiI~taT~s~--~Pv~~~~~l~~g~hi~aiGa~~p~~~El 222 (302)
T PRK06407 185 DTITSITNSD--TPIFNRKYLGDEYHVNLAGSNYPNRREA 222 (302)
T ss_pred CEEEEECCCC--CCCCCHHHCCCCCEEEEECCCCCCCCCC
T ss_conf 9999941898--8671588879994899637999985307
No 290
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.79 E-value=0.0002 Score=48.67 Aligned_cols=82 Identities=16% Similarity=0.194 Sum_probs=58.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|.+||.|+ +++|+.+++.|++..- +++..+++. .++.++.+... ..++...++|+.|.+++.++++..
T Consensus 10 gK~alITGas~GIG~aia~~la~~Ga---~Vv~~~~~~--~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~ 79 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGC---DIVGINIVE--PTETIEQVTAL-----GRRFLSLTADLRKIDGIPALLERA 79 (253)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCC--HHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 99899938876899999999998799---999955877--49999999965-----995799980379999999999999
Q ss_pred -----CCCEEEECCCCCC
Q ss_conf -----9729997376100
Q gi|254780742|r 81 -----NSQIIINVGSSFL 93 (419)
Q Consensus 81 -----~~dvVin~~~p~~ 93 (419)
+.|++||.+|...
T Consensus 80 ~~~~G~iDilVnnAG~~~ 97 (253)
T PRK08993 80 VAEFGHIDILVNNAGLIR 97 (253)
T ss_pred HHHHCCCEEEEECCCCCC
T ss_conf 998499729998997788
No 291
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.78 E-value=0.0004 Score=46.59 Aligned_cols=82 Identities=11% Similarity=0.152 Sum_probs=57.8
Q ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCCCCEEEEEECCH--HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 7319998498---779999999996089872599963999--99999998734302455555730899437898999999
Q gi|254780742|r 2 KKNVLIIGAG---GVAHVVAHKCAQNNDILGDINIASRTL--QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVEL 76 (419)
Q Consensus 2 ~k~ilv~GaG---~vG~~~~~~L~~~~~~~~~i~va~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~ 76 (419)
-|++||.||+ ++|+.+++.|++..- +++|.+++. .++++.++++.... ......++|+.|.+++.++
T Consensus 7 GK~alVTGaag~~GiG~aia~~la~~GA---~V~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dvs~~~~v~~~ 78 (259)
T PRK07370 7 GKKALVTGIANNRSIAWGIAQQLHAAGA---ELGITYLPDEKGRFEKKVRELTEPL-----NPSLFLPCNVQDDAQIEEV 78 (259)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCC---EEEEEECCCCCHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHH
T ss_conf 9989997989985799999999998699---9999947870135899999998412-----8648999128999999999
Q ss_pred HHHC-----CCCEEEECCCC
Q ss_conf 9753-----97299973761
Q gi|254780742|r 77 IKKT-----NSQIIINVGSS 91 (419)
Q Consensus 77 ~~~~-----~~dvVin~~~p 91 (419)
++.. +.|++||+++.
T Consensus 79 ~~~~~~~~G~iDilVnna~~ 98 (259)
T PRK07370 79 FETIKQKWGQLDILVHCLAF 98 (259)
T ss_pred HHHHHHHHCCCCEEEEEECC
T ss_conf 99999985898779863011
No 292
>pfam02254 TrkA_N TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.
Probab=97.77 E-value=0.001 Score=43.90 Aligned_cols=110 Identities=12% Similarity=0.177 Sum_probs=74.1
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE
Q ss_conf 99984987799999999960898725999639999999999873430245555573089943789899999997539729
Q gi|254780742|r 5 VLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQI 84 (419)
Q Consensus 5 ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dv 84 (419)
|+|+|+|.+|+.+++.|.++. ++++-|+|+++++++.+. .+.+...|+.|++.|.++--+ +++.
T Consensus 1 viI~G~g~~G~~la~~L~~~~----~v~vId~d~~~~~~~~~~-----------~~~vi~GD~~~~~~L~~a~i~-~a~~ 64 (115)
T pfam02254 1 IIIIGYGRVGRSLAEELREGG----PVVVIDKDPERVEELREE-----------GVPVVVGDATDEEVLEEAGIE-DADA 64 (115)
T ss_pred CEEECCCHHHHHHHHHHHHCC----CEEEEECCHHHHHHHHHC-----------CCEEEEEECCCHHHHHHHCCC-CCCE
T ss_conf 999878889999999998089----999999987998778866-----------986999956886678761920-2879
Q ss_pred EEECCCCCC-CHHHHHHHHHC-CC-CEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 997376100-32789999862-88-68960366420000144200003577510888851886995
Q gi|254780742|r 85 IINVGSSFL-NMSVLRACIDS-NV-AYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAIL 147 (419)
Q Consensus 85 Vin~~~p~~-~~~v~~a~i~~-g~-hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~ 147 (419)
||.+.+-.. +..++..+-+. +. +.+-.+.+. .+.+..++.|+..+.
T Consensus 65 vi~~~~~d~~n~~~~~~~r~~~~~~~iiar~~~~-----------------~~~~~l~~~Gad~vi 113 (115)
T pfam02254 65 VVAATGDDEANILIVLLARELNPAKKIIARANDP-----------------EHAELLRRLGADEVI 113 (115)
T ss_pred EEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCH-----------------HHHHHHHHCCCCEEE
T ss_conf 9996298499999999999978998099998789-----------------999999976989997
No 293
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.00026 Score=47.88 Aligned_cols=73 Identities=11% Similarity=0.223 Sum_probs=57.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|++||.|+ .++|+.+++.|+++.- ++++.+|+..+. ........+.|+.|++++.++++..
T Consensus 9 gK~alITG~s~GIG~aia~~la~~Ga---~V~~~~r~~~~~--------------~~~~~~~~~~Dv~~~~~v~~~v~~~ 71 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARFREAGA---RVVTTARSRPDD--------------LPEGVEFVAADLTTAEGCAAVARAV 71 (260)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCC--------------CCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 99899947576999999999998799---999994884013--------------7986289983799999999999999
Q ss_pred -----CCCEEEECCCC
Q ss_conf -----97299973761
Q gi|254780742|r 81 -----NSQIIINVGSS 91 (419)
Q Consensus 81 -----~~dvVin~~~p 91 (419)
+.|++||.+|.
T Consensus 72 ~~~~g~iDiLVnNAG~ 87 (260)
T PRK06523 72 LERLGGVDILVHVLGG 87 (260)
T ss_pred HHHCCCCCEEEECCCC
T ss_conf 9974999799989988
No 294
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase; InterPro: IPR011283 This entry represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of 1.1.1.36 from EC is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. ; GO: 0018454 acetoacetyl-CoA reductase activity, 0042619 poly-hydroxybutyrate biosynthetic process, 0005737 cytoplasm.
Probab=97.77 E-value=0.0002 Score=48.68 Aligned_cols=84 Identities=12% Similarity=0.172 Sum_probs=62.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.-||-|+ |++|++|++.|++... -++|...+..-++-.+|+..... ....|...+.||+|.|+-++++++.
T Consensus 1 rvALVTGg~GGIGtAIC~rL~~dG~----~V~An~~p~N~~~a~~W~~~~~~--~g~~~~~~~~DV~~~e~c~~~v~~v~ 74 (244)
T TIGR01829 1 RVALVTGGTGGIGTAICTRLAKDGY----RVAANYVPSNEERAEAWLQEQGA--QGFDFAVVEGDVSSFEDCKAAVAKVE 74 (244)
T ss_pred CEEEEECCCCCHHHHHHHHHHHCCC----EEEECCCCCCHHHHHHHHHHHCC--CCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9478857877446899999987598----89881789825899999986269--85147898727677789999999999
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
..||+||.+|=.
T Consensus 75 a~lGpvDvLVNNAGIT 90 (244)
T TIGR01829 75 AELGPVDVLVNNAGIT 90 (244)
T ss_pred HCCCCEEEEEECCCCC
T ss_conf 7119536898688644
No 295
>pfam02571 CbiJ Precorrin-6x reductase CbiJ/CobK. This family consists of Precorrin-6x reductase EC:1.3.1.54. This enzyme catalyses the reaction: precorrin-6Y + NADP(+) <= precorrin-6X + NADPH. CbiJ and CobK both catalyse the reduction of macocycle in the colbalmin biosynthesis pathway.
Probab=97.77 E-value=0.002 Score=41.91 Aligned_cols=96 Identities=13% Similarity=0.178 Sum_probs=67.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
++|||+|.+.=|+.++..|.+... +.++---..++ . ......+.++.--..+.+.+.+++++++.
T Consensus 1 ~~IlilgGT~e~r~la~~L~~~g~----~~v~t~~~~~~-------~----~~~~~~~~~~~G~l~~~~~m~~~i~~~~i 65 (246)
T pfam02571 1 MRILILGGTTEARALAAALAAAGV----VSVVTSLAGRT-------A----APRLPPLPVRVGGFGGADGLAAYLREEGI 65 (246)
T ss_pred CEEEEEEECHHHHHHHHHHHHCCC----EEEEECCCHHH-------C----CCCCCCCCEEECCCCCHHHHHHHHHHCCC
T ss_conf 969999736899999999985698----79998475544-------3----76678850897998999999999997799
Q ss_pred CEEEECCCCC---CCHHHHHHHHHCCCCEEEECC
Q ss_conf 2999737610---032789999862886896036
Q gi|254780742|r 83 QIIINVGSSF---LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 83 dvVin~~~p~---~~~~v~~a~i~~g~hyvD~s~ 113 (419)
++||++.=|| ....+.++|-+.|++|+=.--
T Consensus 66 ~~vIDATHPfA~~is~na~~a~~~~~ipyiR~eR 99 (246)
T pfam02571 66 DAVIDATHPFAAQISRNAAAACKELGVPLLRLER 99 (246)
T ss_pred CEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 7999899996899999999999985996899606
No 296
>PRK07340 ornithine cyclodeaminase; Validated
Probab=97.76 E-value=0.00027 Score=47.80 Aligned_cols=101 Identities=12% Similarity=0.121 Sum_probs=73.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+++.|+|+|..++.-++.++.-.+. .++.|.+|+.++++++++.+.... .... . .+.+ +.++ .+
T Consensus 126 ~~l~iiGaG~QA~~~~~a~~~v~~~-~~V~v~~r~~~~a~~~~~~~~~~~-------~~~~-~--~~~e---~av~--~a 189 (304)
T PRK07340 126 RDLLLIGTGVQAAHHLEALAALLPV-RRVWVRGRTAASAAAFCAAARALG-------PTLE-P--LDGD---AIPP--AV 189 (304)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCC-CEEEEECCCHHHHHHHHHHHHCCC-------CCEE-E--CCHH---HHHH--HC
T ss_conf 5179973479999999999985997-489998799899999999986009-------9179-7--6899---9984--28
Q ss_pred CEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCC
Q ss_conf 299973761003278999986288689603664200001
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKIC 121 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~ 121 (419)
|||+.|.+.. .+++..++..|+|..-++.+.+.++++
T Consensus 190 DiI~taT~S~--~Pv~~~~~~~g~hI~aiGs~~p~~~El 226 (304)
T PRK07340 190 DVVVTVTTSR--TPVYPEAARAGRLVVGVGAFTPDMAEL 226 (304)
T ss_pred CEEEEECCCC--CCCCCCCCCCCEEEECCCCCCCCCEEC
T ss_conf 9899941899--764465579981894137899984356
No 297
>pfam01262 AlaDh_PNT_C Alanine dehydrogenase/PNT, C-terminal domain. This family now also contains the lysine 2-oxoglutarate reductases.
Probab=97.75 E-value=0.00066 Score=45.14 Aligned_cols=98 Identities=16% Similarity=0.195 Sum_probs=70.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC-CCCHHHHHHHHHHCC
Q ss_conf 3199984987799999999960898725999639999999999873430245555573089943-789899999997539
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVD-ALNIKAVVELIKKTN 81 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D-~~d~~~l~~~~~~~~ 81 (419)
.+++|+|+|.+|..+++.. ..... ++++.|++.++++++.+..+. ....+ ..+.+.|.+.++ .
T Consensus 21 a~vvViG~Gv~G~~A~~~A-~~lGa--~V~v~D~~~~~l~~~~~~~~~-----------~v~~~~~~~~~~l~~~i~--~ 84 (150)
T pfam01262 21 AKVVVIGGGVVGLGAAATA-KGLGA--PVTILDVRPERLEQLDSLFAE-----------FVETDIFSNCEYLAEAIA--E 84 (150)
T ss_pred CEEEEECCCHHHHHHHHHH-HHCCC--EEEEEECCHHHHHHHHHHCCC-----------CCCCHHHCCHHHHHHHHH--H
T ss_conf 7799989878999999999-86799--899972999999999986476-----------200166537999999974--3
Q ss_pred CCEEEECCCCC------CCHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 72999737610------032789999862886896036642
Q gi|254780742|r 82 SQIIINVGSSF------LNMSVLRACIDSNVAYIDTAIHES 116 (419)
Q Consensus 82 ~dvVin~~~p~------~~~~v~~a~i~~g~hyvD~s~~~~ 116 (419)
+|+||+++-.. .-..-+-...+.|.-.||++.+..
T Consensus 85 aDvvIgavl~pg~~aP~lIt~~mv~~MkpGsVIVDvaiDqG 125 (150)
T pfam01262 85 ADLVIGTVLIPGARAPKLVTREMVKTMKPGSVIVDVAIDQG 125 (150)
T ss_pred CCEEEEEEECCCCCCCCEECHHHHHHHCCCCEEEEEECCCC
T ss_conf 87999720317886992207999984479939999620489
No 298
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.74 E-value=0.00016 Score=49.35 Aligned_cols=80 Identities=13% Similarity=0.149 Sum_probs=57.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
++||.|+|+|.||+.++..|+.+.- ..++++-|++.++++..+.-|....... ....+. ..|.+.+ + +
T Consensus 6 ~~KI~IIGaG~VG~~~a~~l~~~~l-~~el~LiD~~~~~a~g~a~Dl~h~~~~~--~~~~i~---~gdy~~~----~--d 73 (315)
T PRK00066 6 HNKVVLVGDGAVGSSYAYALVNQGI-ADELVIIDINKEKAEGDAMDLSHAVPFT--SPTKIY---AGDYSDC----K--D 73 (315)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-CCEEEEEECCCCCCHHHHHHHHHHCCCC--CCCEEE---ECCHHHH----C--C
T ss_conf 9849999979889999999986699-8889998089871078999888541236--884797---3999996----7--9
Q ss_pred CCEEEECCCCCC
Q ss_conf 729997376100
Q gi|254780742|r 82 SQIIINVGSSFL 93 (419)
Q Consensus 82 ~dvVin~~~p~~ 93 (419)
+|+||.++|...
T Consensus 74 aDvVVitAG~~~ 85 (315)
T PRK00066 74 ADLVVITAGAPQ 85 (315)
T ss_pred CCEEEECCCCCC
T ss_conf 999998999989
No 299
>PRK06046 alanine dehydrogenase; Validated
Probab=97.74 E-value=0.0004 Score=46.58 Aligned_cols=101 Identities=17% Similarity=0.221 Sum_probs=71.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+.+.|+|+|..++.-++.|++-.+. .++.|.+|+.++++++++++..... +++.. +.+.+. .+ .+
T Consensus 130 ~~l~iiG~G~Qa~~~~~al~~v~~i-~~i~v~~r~~~~~~~fa~~~~~~~~------~~v~~--~~~~~~---~~---~a 194 (326)
T PRK06046 130 KVIGIIGAGNQARTQLEALSRVFDL-EEVRVYDRTKESCEKFISEMSDFVP------CEIVY--EEDVEE---AC---DC 194 (326)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHHCC------CCEEE--CCCHHH---HH---CC
T ss_conf 5589965708899999999973897-7899991899999999999986559------86597--399999---82---79
Q ss_pred CEEEECCCCCCCHHHH-HHHHHCCCCEEEECCCCCCHHC
Q ss_conf 2999737610032789-9998628868960366420000
Q gi|254780742|r 83 QIIINVGSSFLNMSVL-RACIDSNVAYIDTAIHESPLKI 120 (419)
Q Consensus 83 dvVin~~~p~~~~~v~-~a~i~~g~hyvD~s~~~~~~~~ 120 (419)
|+|+.+.+. . .+++ ...++.|+|..-+..+.+.+++
T Consensus 195 DiI~taT~s-~-~P~~~~~~l~pG~hi~~iG~~~p~~~E 231 (326)
T PRK06046 195 DILVTTTPS-R-KPVVKADWVKEGTHINAIGADAPGKQE 231 (326)
T ss_pred CEEEEEECC-C-CCEECCCCCCCCCEEEECCCCCCCHHC
T ss_conf 999998289-9-845144335787177412689866100
No 300
>TIGR00036 dapB dihydrodipicolinate reductase; InterPro: IPR011770 Dihydrodipicolinate reductase is an enzyme found in bacteria and higher plants which is involved in the biosynthesis of diaminopimelic acid, a component of bacterial cell walls, and the essential amino acid L-lysine. It catalyses the the reduced pyridine nucleotide-dependent reduction of the alpha,beta-unsaturated cyclic imine, dihydrodipicolinate, to generate tetrahydrodipicolinate as shown below : 2,3-dihydrodipicolinate + NAD(P)H = 2,3,4,5-tetrahydrodipicolinate + NAD(P)(+) As this enzyme is not found in mammals it is a potential target for the development of novel antibacterial and herbicidal compounds. The structures of the Escherichia coli (P04036 from SWISSPROT) and Mycobacterium tuberculosis (P72024 from SWISSPROT) enzymes have been determined , . The enzyme is a homotetramer where each monomer is composed of two domains, an N-terminal NAD(P)H-binding domain which forms a Rossman fold, and a C-terminal substrate-binding domain that forms an open, mixed alpha-beta sandwich.Tetramerisation occurs exclusively through interactions between C-terminal domain residues. Both enzymes show relatively little preference for either NADH or NADPH as cofactor. Conformational changes upon substrate binding bring the cofactor and substrate into close proximity and allow catalysis to occur. ; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0005737 cytoplasm.
Probab=97.73 E-value=0.00082 Score=44.51 Aligned_cols=176 Identities=18% Similarity=0.176 Sum_probs=107.1
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEEC-CHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHH-HHH-HH
Q ss_conf 1999849-87799999999960898725999639-99999999987343024555557308994378989999-999-75
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASR-TLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVV-ELI-KK 79 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~-~~~-~~ 79 (419)
+|.|-|| |.||+.+++.+.+.++...-+..-+| +.++..+=+-+|.. +....+-+.+.-++. .++ ..
T Consensus 3 kvav~GA~GRMG~~~ik~~~~~ye~l~Lv~A~~~~~~~~~G~D~GEl~g---------~g~~gv~v~~~~~~~~~l~~~~ 73 (281)
T TIGR00036 3 KVAVAGAAGRMGRELIKAVLQAYEGLKLVAAFERHGSSLQGTDIGELAG---------IGKVGVPVTDDLEAVLVLAFTE 73 (281)
T ss_pred CEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCEEEEC---------CCCCCCCHHHHHHHHHHHHHHC
T ss_conf 3588478873469999999974898167888861688856654202422---------5547841000578899987402
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHCCCCEEE-ECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHH
Q ss_conf 3972999737610032789999862886896-036642000014420000357751088885188699537501114889
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRACIDSNVAYID-TAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNA 158 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD-~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~l 158 (419)
..+||+|+-.-|.-...-++.|+++|+..|- +||.+ ++...++.+.|+++|+.+|..-=|+=|+-=|
T Consensus 74 ~~~DVliDFT~p~g~~~~~~~a~~~Gv~~V~GTTGf~------------e~~~~~~~~~a~~~~~~~v~A~NFa~GV~~~ 141 (281)
T TIGR00036 74 TKPDVLIDFTTPEGVVENVKIALENGVRLVVGTTGFS------------EEDLQELRDLAEKKGVAAVIAPNFAIGVNLM 141 (281)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCC------------HHHHHHHHHHHHHCCCCEEEECCCHHHHHHH
T ss_conf 3686478738605678999999966885577166899------------8999999999986499789846506899999
Q ss_pred --HHHHHHHHHCCCCCEEEEEEC-CCCCCCCCCCCCCCHHHHHHHC
Q ss_conf --999999974366638976302-4788886665425689988622
Q gi|254780742|r 159 --FARLAQDEYFDKITDIDIIDV-NAGKHDKYFATNFDAEINLREF 201 (419)
Q Consensus 159 --la~~~~~~~~d~~~~i~~~~~-~~~~~~~~~~~~~s~~~~l~~~ 201 (419)
++.++++- +++...|.+... +.-....|-+|--++-.++.+.
T Consensus 142 ~K~~~~aA~~-l~D~~DiEIIE~HHr~K~DAPSGTAL~~~E~i~~~ 186 (281)
T TIGR00036 142 FKLLEKAAKY-LGDYTDIEIIELHHRHKKDAPSGTALKLAEIIAEA 186 (281)
T ss_pred HHHHHHHHHH-HCCCCCEEEEECHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9999999876-24565545441200258999707899999999987
No 301
>TIGR02415 23BDH acetoin reductases; InterPro: IPR014007 One member of this family, as characterised in Klebsiella terrigena , is able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also capable of irreversible reduction of diacetyl with NADH to acetoin. There has been a reuctance to classify the enzyme as either 1.1.1.4 from EC, which is (R,R)-butanediol dehydrogenase, or 1.1.1.5 from EC, which is acetoin dehydrogenase without a specified stereochemistry . Another member of this family, from Corynebacterium glutamicum (Brevibacterium flavum), is called L-2,3-butanediol dehydrogenase . This enzyme is a homotetramer in the family of short chain dehydrogenases (IPR002198 from INTERPRO). .
Probab=97.73 E-value=0.00038 Score=46.73 Aligned_cols=155 Identities=15% Similarity=0.148 Sum_probs=97.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECC--HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 31999849-877999999999608987259996399--999999998734302455555730899437898999999975
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRT--LQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.-||-|+ .|+|+.|++.|++.. ..|+|+|.| ++.+.+.+.+|... ..+--+..+||+|.+..-+++.+
T Consensus 1 KvAlvTGgAqGIG~gIa~RLa~DG---F~vav~D~n~Qe~~A~~t~~~i~~~-----G~~Ava~~~DV~~k~~~~~~i~~ 72 (258)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDG---FNVAVADLNNQEETAKETAKEINQK-----GGKAVAYKLDVSDKSQVFEAIDQ 72 (258)
T ss_pred CEEEEECCCCCHHHHHHHHHHHCC---CEEEEECCCCCHHHHHHHHHHHHHC-----CCEEEEEECCCCCHHHHHHHHHH
T ss_conf 926785685432389999998346---1378725666368999999999866-----97379986473456789999999
Q ss_pred C-----CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCC-CCCCHHHHHHHHHHHHHCCC---EEEECCC
Q ss_conf 3-----9729997376100327899998628868960366420000144-20000357751088885188---6995375
Q gi|254780742|r 80 T-----NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICES-PPWYNNYEWSLLDECRTKSI---TAILGAG 150 (419)
Q Consensus 80 ~-----~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~-~~~~~~~~~~l~~~a~~ag~---~~i~~~G 150 (419)
. .-||.||=+| +..=.+..|++.+.-.--.... ..-+=..|.+ ++++++-+. .||+.|.
T Consensus 73 A~~~fG~fdV~VNNAG-----------va~~~pi~~iteE~l~k~y~vNV~GvlfGIQAA-~~~Fkk~~~~tGkIINAaS 140 (258)
T TIGR02415 73 AVEKFGGFDVMVNNAG-----------VAPVTPILEITEEELEKLYNVNVKGVLFGIQAA-ARQFKKQGHGTGKIINAAS 140 (258)
T ss_pred HHHHCCCCEEEEECCC-----------CCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH-HHHHHHCCCCCCCHHHHHH
T ss_conf 9997089327865241-----------000277454670034234301014566788999-9877871689871157765
Q ss_pred HHHHH--HHHHH------------HHHHHHHCCCCCEEEEE
Q ss_conf 01114--88999------------99999743666389763
Q gi|254780742|r 151 FDPGV--VNAFA------------RLAQDEYFDKITDIDII 177 (419)
Q Consensus 151 ~~PGl--~~lla------------~~~~~~~~d~~~~i~~~ 177 (419)
.+.-. ..+.+ --++++|-++..+|..|
T Consensus 141 iAg~~G~p~ls~YsstKFAVRgLTQtAA~eLA~~GITVNaY 181 (258)
T TIGR02415 141 IAGVEGNPVLSAYSSTKFAVRGLTQTAAQELAPKGITVNAY 181 (258)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
T ss_conf 75540441467777678888765799999975248737440
No 302
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.0007 Score=44.97 Aligned_cols=82 Identities=20% Similarity=0.242 Sum_probs=61.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH-
Q ss_conf 31999849-87799999999960898725999-6399999999998734302455555730899437898999999975-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINI-ASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK- 79 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~v-a~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~- 79 (419)
|.+||-|+ +++|+.+++.|++..- ++++ .+++.+++++.++++.... .+......|+.+.+++..+++.
T Consensus 5 KvalITGas~GIG~aiA~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~ 76 (252)
T PRK12747 5 KVALVTGASRGIGRAIAKRLANDGA---LVAIHYGNRKEEAEETVYEIQSNG-----GSAFSIGANLESLHGVEALYSSL 76 (252)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHCC-----CCEEEEECCCCCHHHHHHHHHHH
T ss_conf 9999948477899999999998799---999965998789999999999649-----95799833635679999999999
Q ss_pred ----------CCCCEEEECCCCC
Q ss_conf ----------3972999737610
Q gi|254780742|r 80 ----------TNSQIIINVGSSF 92 (419)
Q Consensus 80 ----------~~~dvVin~~~p~ 92 (419)
.+.|++||.+|-.
T Consensus 77 ~~~~~~~~g~~~iDiLVnnAG~~ 99 (252)
T PRK12747 77 DNELQKRTGSTKFDILINNAGIG 99 (252)
T ss_pred HHHHHHHCCCCCCCEEEECCCCC
T ss_conf 99999842899810899899999
No 303
>KOG0409 consensus
Probab=97.73 E-value=0.00035 Score=47.02 Aligned_cols=93 Identities=18% Similarity=0.279 Sum_probs=62.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
+++|=.+|-|.||+.++..|.++.. .++|-||+.++++.+++.=. ++ ++.|.++.+ .
T Consensus 35 ~~~iGFIGLG~MG~~M~~nLik~G~---kVtV~dr~~~k~~~f~~~Ga-----------~v----~~sPaeVae-----~ 91 (327)
T KOG0409 35 KTRIGFIGLGNMGSAMVSNLIKAGY---KVTVYDRTKDKCKEFQEAGA-----------RV----ANSPAEVAE-----D 91 (327)
T ss_pred CCEEEEEEECCCHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCH-----------HH----HCCHHHHHH-----H
T ss_conf 5513577434111899999997598---79999586788789997050-----------14----079799986-----3
Q ss_pred CCEEEECCCCCCCH-HHH------HHHHHCCCCE-EEECCCCCC
Q ss_conf 72999737610032-789------9998628868-960366420
Q gi|254780742|r 82 SQIIINVGSSFLNM-SVL------RACIDSNVAY-IDTAIHESP 117 (419)
Q Consensus 82 ~dvVin~~~p~~~~-~v~------~a~i~~g~hy-vD~s~~~~~ 117 (419)
+|+||.+++..-+. .++ --.+..|..| ||.|-.++.
T Consensus 92 sDvvitmv~~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~ 135 (327)
T KOG0409 92 SDVVITMVPNPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPD 135 (327)
T ss_pred CCEEEEECCCHHHHHHHHCCCCCCEEECCCCCCEEEECCCCCHH
T ss_conf 68899976880766888407786235215888347762446878
No 304
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=97.73 E-value=0.0025 Score=41.26 Aligned_cols=157 Identities=14% Similarity=0.085 Sum_probs=96.8
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCC-CCEEEEEECCHHHHHHHHHHHHHHCCCCCCC--------CCEEEEECCCCHHH
Q ss_conf 31999849-87799999999960898-7259996399999999998734302455555--------73089943789899
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDI-LGDINIASRTLQKCSKIIDSIYKKKSLKIDG--------KLAIHQVDALNIKA 72 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~-~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~D~~d~~~ 72 (419)
|+|.|+|+ |.+|..+...+.++.+. ......|++|.+++.+.+.++.-......+. .... .+ ....+.
T Consensus 2 k~i~IlGsTGSIG~~tL~Vi~~~~~~f~v~~lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~~~~~~~~-~~-~~g~~~ 79 (379)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRHPDRFRVVALSAGSNVELLAEQIREFRPKYVVVADEAAAKELKAALAG-KV-LAGEEG 79 (379)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCC-CE-EECHHH
T ss_conf 7899985695888999999995868758999992897999999999949999999288999999875588-28-868899
Q ss_pred HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHH
Q ss_conf 99999753972999737610032789999862886896036642000014420000357751088885188699537501
Q gi|254780742|r 73 VVELIKKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFD 152 (419)
Q Consensus 73 l~~~~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~ 152 (419)
+.++++..++|+|||+.-.+.+..-.-.++++|.... ++.-++-+.. . .-+.+.+++.+..++| +|
T Consensus 80 l~~~~~~~~~D~vi~aisG~~GL~pt~~ai~~gk~la-LANKEsiV~~--------G--~li~~~~k~~~~~IiP---vD 145 (379)
T PRK05447 80 LCELAALPEADVVVAAIVGAAGLLPTLAAIKAGKRIA-LANKESLVCA--------G--ELVMDAAKKSGAQILP---VD 145 (379)
T ss_pred HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEE-EECCCHHEEC--------H--HHHHHHHHHCCCEEEE---CC
T ss_conf 9999736789999981343645799999997399389-8434031024--------7--9999999863986864---36
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 1148899999999743666389763
Q gi|254780742|r 153 PGVVNAFARLAQDEYFDKITDIDII 177 (419)
Q Consensus 153 PGl~~lla~~~~~~~~d~~~~i~~~ 177 (419)
+=-+.+ .++...-...++.|..-
T Consensus 146 SEH~Ai--fq~l~~~~~~i~~i~lT 168 (379)
T PRK05447 146 SEHSAI--FQCLPGENEGVEKIILT 168 (379)
T ss_pred HHHHHH--HHHHHCCCCCEEEEEEE
T ss_conf 088999--99972675400168995
No 305
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.72 E-value=0.00015 Score=49.46 Aligned_cols=80 Identities=13% Similarity=0.143 Sum_probs=56.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
+.||.|+|||.||+.+|+.|+.+.- ..++++-|++.++++..+..+.......... .. .-..|.+.+ + +
T Consensus 3 r~Kv~IIGaG~VG~~~A~~l~~~~l-~~el~L~Di~~~~a~g~a~Dl~h~~~~~~~~--~v--~~~~d~~~~----~--~ 71 (312)
T cd05293 3 RNKVTVVGVGQVGMACAISILAKGL-ADELVLVDVVEDKLKGEAMDLQHGSAFLKNP--KI--EADKDYSVT----A--N 71 (312)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-CCEEEEEECCCCCCHHHHHHHHHCCCCCCCC--EE--EECCCHHHH----C--C
T ss_conf 8869998978889999999996699-8879999388983326888866040127985--59--937999996----8--9
Q ss_pred CCEEEECCCCC
Q ss_conf 72999737610
Q gi|254780742|r 82 SQIIINVGSSF 92 (419)
Q Consensus 82 ~dvVin~~~p~ 92 (419)
+|+||.++|..
T Consensus 72 aDvVVitAG~~ 82 (312)
T cd05293 72 SKVVIVTAGAR 82 (312)
T ss_pred CCEEEECCCCC
T ss_conf 99999889999
No 306
>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]
Probab=97.71 E-value=0.00034 Score=47.08 Aligned_cols=142 Identities=14% Similarity=0.143 Sum_probs=89.7
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEE-EEEECCHHHHHHHHHHHHHHCCCCCCCC-CEEE-----EEC-CCCHHH
Q ss_conf 731999849-877999999999608987259-9963999999999987343024555557-3089-----943-789899
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDI-NIASRTLQKCSKIIDSIYKKKSLKIDGK-LAIH-----QVD-ALNIKA 72 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i-~va~r~~~~~~~~~~~l~~~~~~~~~~~-~~~~-----~~D-~~d~~~ 72 (419)
.|+|+|+|+ |.+|..+...+.++++.+.-+ ..+++|.+++.+.++++.-......+.. .+.. ... ..-.+.
T Consensus 1 ~k~i~iLGSTGSIG~qtLdVi~~~p~~f~vval~ag~n~~~l~~q~~~f~P~~v~~~d~~~~~~l~~~~~~~~v~~G~~~ 80 (385)
T COG0743 1 MKKLTILGSTGSIGTQTLDVIRRNPDKFEVVALAAGKNVELLAEQIREFKPKYVVIADESAAKELEDLLPGTEVLVGEEG 80 (385)
T ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCEEEECHHH
T ss_conf 94599971687342889999996898579999734874999999999849845885576779998753147658643778
Q ss_pred HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHH
Q ss_conf 99999753972999737610032789999862886896036642000014420000357751088885188699537501
Q gi|254780742|r 73 VVELIKKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFD 152 (419)
Q Consensus 73 l~~~~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~ 152 (419)
+.+++....+|+|+|+.-...+..-.-+++++|+... ++.-++....- .-+.+.++++|..++| +|
T Consensus 81 l~e~a~~~~~d~Vm~AivG~aGL~pTlaAi~aGK~ia-LANKEsLV~aG----------~l~~~~~k~~g~~llP---VD 146 (385)
T COG0743 81 LCELAAEDDADVVMNAIVGAAGLLPTLAAIKAGKTIA-LANKESLVTAG----------ELVMDAAKESGAQLLP---VD 146 (385)
T ss_pred HHHHHHCCCCCEEEEHHHHHCCCHHHHHHHHCCCCEE-ECCHHHHHCCH----------HHHHHHHHHCCCEEEC---CC
T ss_conf 9999846777877420310121377999998288124-34533531250----------9999999973987705---58
Q ss_pred HHHHH
Q ss_conf 11488
Q gi|254780742|r 153 PGVVN 157 (419)
Q Consensus 153 PGl~~ 157 (419)
+=-+-
T Consensus 147 SEH~A 151 (385)
T COG0743 147 SEHNA 151 (385)
T ss_pred CHHHH
T ss_conf 35789
No 307
>PRK06141 ornithine cyclodeaminase; Validated
Probab=97.71 E-value=0.00036 Score=46.89 Aligned_cols=102 Identities=15% Similarity=0.261 Sum_probs=73.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+.+.|+|+|..++.-++.+..-.+. .++.|.+|+.++++++++++... .+++..+ .+ ..+.++ ++
T Consensus 126 ~~l~iiG~G~QA~~~l~a~~~v~~i-~~v~v~~r~~~~a~~~~~~~~~~-------~~~~~~~--~~---~~~av~--~a 190 (313)
T PRK06141 126 RRLLVVGTGRLASLLALAHASVRPI-KQVRVWGRNPAKAAALAAELREQ-------GFDAEVV--TD---LEAAVR--QA 190 (313)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCC-CEEEEECCCHHHHHHHHHHHHHC-------CCCEEEE--CC---HHHHHH--HC
T ss_conf 6799977889999999999972897-58999938989999999999850-------9975995--89---999861--08
Q ss_pred CEEEECCCCCCCHHHHH-HHHHCCCCEEEECCCCCCHHCC
Q ss_conf 29997376100327899-9986288689603664200001
Q gi|254780742|r 83 QIIINVGSSFLNMSVLR-ACIDSNVAYIDTAIHESPLKIC 121 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~-a~i~~g~hyvD~s~~~~~~~~~ 121 (419)
|+|+.+.+. - .++++ ..+..|+|..-+..+.+.++++
T Consensus 191 DII~taT~s-~-~Pv~~~~~l~~G~hI~avGs~~p~~~El 228 (313)
T PRK06141 191 DIISCATLS-T-EPLVRGEWLRPGTHLDLVGSFTPDMREC 228 (313)
T ss_pred CEEEECCCC-C-CCCCCCCCCCCCCEEEEECCCCCCCEEC
T ss_conf 779971688-9-8644644467872697635899875545
No 308
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.71 E-value=0.0002 Score=48.59 Aligned_cols=82 Identities=11% Similarity=0.139 Sum_probs=59.3
Q ss_pred CEEEEE-CCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 319998-4987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 3 KNVLII-GAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 3 k~ilv~-GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
++|||- |||++|+..++++..+.+. .+|++.|. +. .|..+.+.......+++...+.|+.|.+.+.++++.++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~Dk----LT-YAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~ 74 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDK----LT-YAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQ 74 (340)
T ss_pred CCEEEECCCCHHHHHHHHHHHHCCCC-CEEEEEEC----CC-CCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCC
T ss_conf 93799657515778999999960997-52899752----33-15778788864069971588545547999999997448
Q ss_pred CCEEEECCC
Q ss_conf 729997376
Q gi|254780742|r 82 SQIIINVGS 90 (419)
Q Consensus 82 ~dvVin~~~ 90 (419)
+|+|+|-+-
T Consensus 75 ~D~VvhfAA 83 (340)
T COG1088 75 PDAVVHFAA 83 (340)
T ss_pred CCEEEEECH
T ss_conf 875998110
No 309
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.70 E-value=0.0005 Score=45.92 Aligned_cols=98 Identities=16% Similarity=0.258 Sum_probs=62.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHC---CCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 31999849877999999999608987259996399999999998734302---455555730899437898999999975
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKK---SLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
.+|.|+|+|..|++.+..|+++.. ++.+.+|+.+..+.+.+...+.. ....++++.+ ..++.+.++
T Consensus 2 mkI~ViGaGawGtAlA~~la~n~~---~V~lw~r~~~~~~~In~~~~n~~ylp~i~L~~nI~~-------t~dl~~~l~- 70 (325)
T PRK00094 2 MKIAVLGAGSWGTALAILLARNGH---DVVLWGRDPEHAAEINTDRENPRYLPGIKLPDNLRA-------TSDLAEALA- 70 (325)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC---EEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCEEE-------ECCHHHHHH-
T ss_conf 889998989999999999997899---789998389999999964988656897858998389-------789999983-
Q ss_pred CCCCEEEECCCCCCCHHHHHHH---HHCCCCEEEEC
Q ss_conf 3972999737610032789999---86288689603
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRAC---IDSNVAYIDTA 112 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~---i~~g~hyvD~s 112 (419)
++|+||-++|..+-..+++.. +..++..|.++
T Consensus 71 -~ad~iiiavPs~~~~~~l~~i~~~i~~~~~li~~t 105 (325)
T PRK00094 71 -DADLILVAVPSHAFREVLKQLKPLLRPDAPIVWAT 105 (325)
T ss_pred -CCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf -79849994576999999999986468997499976
No 310
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=97.70 E-value=0.00044 Score=46.29 Aligned_cols=93 Identities=13% Similarity=0.118 Sum_probs=64.0
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC--
Q ss_conf 1999849-8779999999996089872599963999999999987343024555557308994378989999999753--
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT-- 80 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-- 80 (419)
-|||.|| |.+|+.+++.|..... .+.+..|+.+++.. +..+..++|..|++++...+...
T Consensus 1 TIlVtGATG~iG~~v~~~L~~~g~---~v~~~~R~~~~~~~--------------~~~~~v~~d~~d~~~~~~a~~~~d~ 63 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV---PFLVASRSSSSSAG--------------PNEKHVKFDWLDEDTWDNPFSSDDG 63 (285)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCC---CEEEEECCHHHCCC--------------CCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 989998998189999999986899---78999588566466--------------6675368644481148889763532
Q ss_pred ---CCCEEEECCCCC-----CCHHHHHHHHHCCCC-EEEECC
Q ss_conf ---972999737610-----032789999862886-896036
Q gi|254780742|r 81 ---NSQIIINVGSSF-----LNMSVLRACIDSNVA-YIDTAI 113 (419)
Q Consensus 81 ---~~dvVin~~~p~-----~~~~v~~a~i~~g~h-yvD~s~ 113 (419)
+.+.|....|+. .+..++++|.++|+. .|-+|.
T Consensus 64 ~~~~v~~v~l~~p~~~~~~~~~~~~i~aA~~aGV~~iV~lS~ 105 (285)
T TIGR03649 64 MEPEISAVYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 312741899838998776789999999999849988999830
No 311
>PRK12742 oxidoreductase; Provisional
Probab=97.70 E-value=0.0008 Score=44.57 Aligned_cols=78 Identities=14% Similarity=0.321 Sum_probs=58.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-877999999999608987259996-3999999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIA-SRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.+||.|+ +++|+.+++.|+++.. ++++. .++.+.++++..+.. ....+.|..|.+.+.+++++.
T Consensus 7 K~alITGas~GIG~aia~~la~~Ga---~V~i~~~~~~~~~~~~~~~~~----------~~~~~~d~~~~~~~~~~~~~~ 73 (237)
T PRK12742 7 KSVLVLGGSRGIGAAIVRRFVTDGA---NVVFTYAGSKDAAERLAAETG----------ATAVFTDSADRDAVIDVVRKS 73 (237)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHC----------CEEEEECCCCHHHHHHHHHHH
T ss_conf 9899927887999999999998799---999977999899999988639----------828993545899999999986
Q ss_pred C-CCEEEECCCCCC
Q ss_conf 9-729997376100
Q gi|254780742|r 81 N-SQIIINVGSSFL 93 (419)
Q Consensus 81 ~-~dvVin~~~p~~ 93 (419)
+ .|++||.++-..
T Consensus 74 g~iD~lVnnAg~~~ 87 (237)
T PRK12742 74 GPLDILVVNAGIAL 87 (237)
T ss_pred CCCCEEEECCCCCC
T ss_conf 99989998997789
No 312
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.69 E-value=0.0019 Score=42.09 Aligned_cols=121 Identities=12% Similarity=0.099 Sum_probs=74.5
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
+|=++|.|.||..++..|+++. .++++-||++++.+++.+.- ... +.+++++.+-+. .++
T Consensus 2 kIGfIGLG~MG~~mA~nL~~~G---~~V~v~dr~~~~~~~~~~~g-----------a~~----~~s~~e~~~~~d--~pr 61 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGG---HEVVGYDRNPEAVEALAAEG-----------ATG----AASLEELVAKLP--APR 61 (301)
T ss_pred EEEEECHHHHHHHHHHHHHHCC---CEEEEECCCHHHHHHHHHCC-----------CEE----CCCHHHHHHHCC--CCC
T ss_conf 7999834587999999999689---90799769999999999859-----------943----299999997078--887
Q ss_pred EEEECCCCCC-CHHHHH---HHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
Q ss_conf 9997376100-327899---9986288689603664200001442000035775108888518869953750111488
Q gi|254780742|r 84 IIINVGSSFL-NMSVLR---ACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVN 157 (419)
Q Consensus 84 vVin~~~p~~-~~~v~~---a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ 157 (419)
+|+.++|.-- -..|+. ..++.|.=.||.+-..... ..+..++++++|+. ..+|+++.|...
T Consensus 62 vI~l~lp~~~~Vd~Vi~~l~~~l~~g~iiID~sts~~~~------------t~~~a~~l~~~gi~-flDapVSGG~~g 126 (301)
T PRK09599 62 VVWLMVPAGEITDSTIDELAPLLEAGDIVIDGGNSYYKD------------DIRRAELLAEKGIH-FVDVGTSGGVWG 126 (301)
T ss_pred EEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHH------------HHHHHHHHHHCCCC-EECCCCCCCHHH
T ss_conf 799981797038999999996278998887089998388------------99999999985994-544766788778
No 313
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.69 E-value=0.00014 Score=49.72 Aligned_cols=73 Identities=15% Similarity=0.223 Sum_probs=60.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 31999849-87799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
+||-|+|| |.+|+.++....++.. ++|---||++|+..+ ..+.+.+.|+.|++++++.+.+|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH---eVTAivRn~~K~~~~-------------~~~~i~q~Difd~~~~a~~l~g~- 63 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH---EVTAIVRNASKLAAR-------------QGVTILQKDIFDLTSLASDLAGH- 63 (211)
T ss_pred CEEEEEECCCHHHHHHHHHHHHCCC---EEEEEEECHHHCCCC-------------CCCEEECCCCCCHHHHHHHHCCC-
T ss_conf 9078995374567999999986798---048998076766522-------------35302000222745667663587-
Q ss_pred CCEEEECCCCCC
Q ss_conf 729997376100
Q gi|254780742|r 82 SQIIINVGSSFL 93 (419)
Q Consensus 82 ~dvVin~~~p~~ 93 (419)
|+||++.++..
T Consensus 64 -DaVIsA~~~~~ 74 (211)
T COG2910 64 -DAVISAFGAGA 74 (211)
T ss_pred -CEEEEECCCCC
T ss_conf -66997215788
No 314
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.69 E-value=0.00039 Score=46.68 Aligned_cols=74 Identities=20% Similarity=0.290 Sum_probs=57.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.|.+||-|+ +++|+.+++.|+++.- +++..||+.... ...++...++|+.|. .+.++++.
T Consensus 4 ~gK~alVTGas~GIG~aia~~~a~~Ga---~V~~~d~~~~~~--------------~~~~~~~~~~Dv~~~-~v~~~~~~ 65 (237)
T PRK06550 4 MTKTVLVTGAASGIGLAQARAFLEQGA---HVYGVDKSDKPD--------------LSGNFHFIQLDLSSD-KLEPLFKV 65 (237)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHH--------------CCCCEEEEECCCCHH-HHHHHHHH
T ss_conf 998999937477999999999998799---999970861243--------------069738998638889-99999997
Q ss_pred C-CCCEEEECCCCC
Q ss_conf 3-972999737610
Q gi|254780742|r 80 T-NSQIIINVGSSF 92 (419)
Q Consensus 80 ~-~~dvVin~~~p~ 92 (419)
. +.|++||.+|-.
T Consensus 66 ~g~iDiLvNnAGi~ 79 (237)
T PRK06550 66 VPSVDILCNTAGIL 79 (237)
T ss_pred CCCCCEEEECCCCC
T ss_conf 59997999898889
No 315
>pfam01118 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. This Pfam entry contains the following members: N-acetyl-glutamine semialdehyde dehydrogenase (AgrC) Aspartate-semialdehyde dehydrogenase
Probab=97.68 E-value=0.00012 Score=50.14 Aligned_cols=99 Identities=13% Similarity=0.125 Sum_probs=66.0
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 1999849-877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
||-|+|| |.+|+..++.|.+|+.. ....+.+++.+..+.+.+..+.... ........ .+.+. +. ++
T Consensus 1 kvaIiGatGyvG~eLirlL~~hp~~-~i~~l~~s~~saG~~~~~~~~~~~~---~~~~~~~~---~~~~~----~~--~~ 67 (121)
T pfam01118 1 KVAIVGATGYVGQELLRLLAEHPPL-ELVALVASSRSAGKKVAFAGPWLTG---GVDLLLED---VDPED----LK--DV 67 (121)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCC-CCEEEEEECCCCCCCHHHHCCCCCC---CCCCEEEE---CCHHH----HC--CC
T ss_conf 9999893619999999999718875-5137885056589601441654246---66644775---89778----53--89
Q ss_pred CEEEECCCCCCCHHHHHHHHHCCCCEEEECCCC
Q ss_conf 299973761003278999986288689603664
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACIDSNVAYIDTAIHE 115 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~ 115 (419)
|+|+.|+|......+++..+++|+..+|+|.+.
T Consensus 68 Dvvf~alp~~~s~~~~~~~~~~g~~VIDlS~df 100 (121)
T pfam01118 68 DIVFFALPAGVSKELAPKLLEAGAVVIDLSSAF 100 (121)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCEEEECCHHH
T ss_conf 899983876899999999871598998785675
No 316
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.67 E-value=0.00087 Score=44.32 Aligned_cols=22 Identities=41% Similarity=0.389 Sum_probs=12.3
Q ss_pred EEEEECCCHHHHHHHHHHHHCC
Q ss_conf 1999849877999999999608
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNN 25 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~ 25 (419)
.||+.|+|.....+...|....
T Consensus 42 ~~l~~~~~~~~~~~~~~l~~~~ 63 (447)
T PRK08261 42 PVLIGGAGRLAEALAAALAGLG 63 (447)
T ss_pred CEEEECCCHHHHHHHHHHHHCC
T ss_conf 6799126145899999997468
No 317
>PRK06813 homoserine dehydrogenase; Validated
Probab=97.66 E-value=0.00061 Score=45.38 Aligned_cols=157 Identities=7% Similarity=0.009 Sum_probs=86.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-------CCCC-EEEEEECCHHHHHHH----HHHHHHHCCCCCCCCCEEEEECCC
Q ss_conf 9731999849877999999999608-------9872-599963999999999----987343024555557308994378
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNN-------DILG-DINIASRTLQKCSKI----IDSIYKKKSLKIDGKLAIHQVDAL 68 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~-------~~~~-~i~va~r~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~D~~ 68 (419)
|+=+|.++|.|.||+.+++.|.++. .... -..|++|+......- ...+..... ...+... .+ .
T Consensus 1 m~i~I~l~G~G~VG~~~~~~l~~~~~~l~~~~g~~l~i~~i~~s~~~~~~~~g~~~~~~l~~~~~---~~~~~~~-~~-~ 75 (341)
T PRK06813 1 MKIKVVLSGYGTVGREFIKLLNEKYLYINETYGIDLVVSGVLGRNVAIHNEDGLSIHHLLRYGGG---SAAIEKY-IE-H 75 (341)
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHCCCCCCCHHHHHHCCCC---CHHHHHH-HH-H
T ss_conf 96029999538899999999999999999974997799999968601137668887898750353---0235555-54-2
Q ss_pred CHHHHHHHHHHCCCCEEEECCCCC-----CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 989999999753972999737610-----032789999862886896036642000014420000357751088885188
Q gi|254780742|r 69 NIKAVVELIKKTNSQIIINVGSSF-----LNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSI 143 (419)
Q Consensus 69 d~~~l~~~~~~~~~dvVin~~~p~-----~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~ 143 (419)
.++. ........|++|.+.+.. .....++.|+++|+|.|...=. .+.....+|.+.|+++|+
T Consensus 76 ~~~~--~~~~~~~~~i~vd~t~~~~~~~~~a~~~i~~al~~g~~VVTANK~-----------~la~~~~el~~la~~~~~ 142 (341)
T PRK06813 76 HPEE--RATDNISGTVLVESTVTNLKDGNPGKQYIKQAIEKQMDIVAISKG-----------ALVTNWREINEAAKIANV 142 (341)
T ss_pred CHHH--HHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCHH-----------HHHHHHHHHHHHHHHCCC
T ss_conf 3466--630355676699911221357645899999999729968932747-----------777539999999997399
Q ss_pred EEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 699537501114889999999974366638976
Q gi|254780742|r 144 TAILGAGFDPGVVNAFARLAQDEYFDKITDIDI 176 (419)
Q Consensus 144 ~~i~~~G~~PGl~~lla~~~~~~~~d~~~~i~~ 176 (419)
.+.-++-+.-|+.-+-.....- ..|++.+|.-
T Consensus 143 ~~~yEasVggGiPiI~~l~~~l-~gd~I~~I~G 174 (341)
T PRK06813 143 RIRYSGATAAALPTLDIGQFSL-AGCHIEKIEG 174 (341)
T ss_pred EEEEEEEEEECCHHHHHHHHHC-CCCCEEEEEE
T ss_conf 1899704011402526666533-4573579999
No 318
>PRK06924 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00081 Score=44.52 Aligned_cols=79 Identities=19% Similarity=0.302 Sum_probs=54.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|.+||.|+ +++|+.++..|+++.. ++++.+|+.++......+.. ..++...++|+.|.+++.+.++..
T Consensus 2 K~alITGas~GIG~aiA~~la~~G~---~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~~~~~~~~~~ 71 (251)
T PRK06924 2 RYVIITGTSKGLGEAIATQLLEKGT---SVISISRRENKELTKLAEQY-------NSNLTFHSLDLQDLHNLETNFNEIL 71 (251)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHHHHH-------CCCCEEEEEEECCHHHHHHHHHHHH
T ss_conf 9999929874999999999998799---99999798227899999874-------6893699997058999999999999
Q ss_pred --------CCCEEEECCCC
Q ss_conf --------97299973761
Q gi|254780742|r 81 --------NSQIIINVGSS 91 (419)
Q Consensus 81 --------~~dvVin~~~p 91 (419)
..+++||.+|-
T Consensus 72 ~~~~~~~~~~i~LVnNAG~ 90 (251)
T PRK06924 72 SSIQEDDVSSIHLINNAGM 90 (251)
T ss_pred HHHHHCCCCCEEEEECCCC
T ss_conf 9864315686489954876
No 319
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.65 E-value=0.0011 Score=43.77 Aligned_cols=77 Identities=10% Similarity=0.164 Sum_probs=55.8
Q ss_pred CEEEEEC--CC-HHHHHHHHHHHHCCCCCCEEEEEECCH---HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 3199984--98-779999999996089872599963999---99999998734302455555730899437898999999
Q gi|254780742|r 3 KNVLIIG--AG-GVAHVVAHKCAQNNDILGDINIASRTL---QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVEL 76 (419)
Q Consensus 3 k~ilv~G--aG-~vG~~~~~~L~~~~~~~~~i~va~r~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~ 76 (419)
|++||.| ++ ++|..+++.|+++.- ++++.+++. +++++++++++ .....++|+.|.+++.++
T Consensus 7 K~~lVTG~a~~~GIG~aiA~~la~~Ga---~V~~~~~~~~~~~~~~~~~~~~g---------~~~~~~~Dv~~~~~v~~~ 74 (260)
T PRK06997 7 KRILLTGLLSNRSIAYGIAKACKREGA---ELAFTYVGDRFKDRITEFAAEFG---------SDLVFPCDVADDAQIDAL 74 (260)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCC---EEEEECCCHHHHHHHHHHHHHCC---------CCEEEECCCCCHHHHHHH
T ss_conf 889998998872899999999998599---99998088066999999998629---------847998379999999999
Q ss_pred HHHC-----CCCEEEECCCC
Q ss_conf 9753-----97299973761
Q gi|254780742|r 77 IKKT-----NSQIIINVGSS 91 (419)
Q Consensus 77 ~~~~-----~~dvVin~~~p 91 (419)
+++. +.|++||.+|-
T Consensus 75 v~~~~~~~g~iD~LVnNAG~ 94 (260)
T PRK06997 75 FASLGTRWDGLDGLVHSIGF 94 (260)
T ss_pred HHHHHHHHCCCCEEEECCCC
T ss_conf 99999984998989644776
No 320
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.63 E-value=0.00068 Score=45.06 Aligned_cols=93 Identities=17% Similarity=0.269 Sum_probs=61.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-CCCEEEEEECCH-HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 97319998498779999999996089-872599963999-9999999873430245555573089943789899999997
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNND-ILGDINIASRTL-QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~-~~~~i~va~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
|+| |.++|+|.||++++.-|.++.. ...++++.+|+. ++++.+.+..+. ..+ .+.+ ++++
T Consensus 1 M~k-I~fIG~GnMg~Aii~Gll~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~------------~~~--~~~~---~~~~ 62 (275)
T PRK06928 1 MEK-IGFIGYGSMADMIATKLLETEVITPEEIILYSRSENEHFKQLYDKYPT------------VAL--ASNE---ELFT 62 (275)
T ss_pred CCE-EEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCC------------EEE--CCHH---HHHH
T ss_conf 988-999867899999999999789999636999789938999999987495------------363--7779---9985
Q ss_pred HCCCCEEEECCCCCCCHHHHHHH---HHCCCCEEEECC
Q ss_conf 53972999737610032789999---862886896036
Q gi|254780742|r 79 KTNSQIIINVGSSFLNMSVLRAC---IDSNVAYIDTAI 113 (419)
Q Consensus 79 ~~~~dvVin~~~p~~~~~v~~a~---i~~g~hyvD~s~ 113 (419)
.+|+|+-|+.|..-..+++.+ +..+.+.|.+..
T Consensus 63 --~~dvIilaVKP~~~~~vl~~i~~~~~~~~~iISi~A 98 (275)
T PRK06928 63 --KCDHSFICVPPLAVLPLMKDCAPVLTPDRHVVSIAA 98 (275)
T ss_pred --HCCEEEEEECHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf --499899997858799999997653279968999569
No 321
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.63 E-value=0.00042 Score=46.42 Aligned_cols=80 Identities=15% Similarity=0.252 Sum_probs=55.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCC-CCEEEEEEC-CHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 73199984987799999999960898-725999639-9999999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDI-LGDINIASR-TLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~-~~~i~va~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
+++|.++|||.||++++.-|.+.... ..++++.+| +.++++.+.++.. +.. ..|. .+.++
T Consensus 4 ~~kI~fIG~GnMg~Aii~gll~~~~~~~~~i~v~~~~~~~~~~~l~~~~~----------i~~----~~~~---~~~~~- 65 (245)
T PRK07634 4 KHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYN----------VST----TTDW---KQHVT- 65 (245)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCC----------CEE----CCCH---HHHHH-
T ss_conf 99199987589999999999977999960599969999999999999719----------742----2777---99985-
Q ss_pred CCCCEEEECCCCCCCHHHHHH
Q ss_conf 397299973761003278999
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRA 100 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a 100 (419)
++|+|+-|+.|.....+++.
T Consensus 66 -~~d~IilavKP~~~~~vl~~ 85 (245)
T PRK07634 66 -SVDTIVLAMPPSAHEELLAE 85 (245)
T ss_pred -HCCEEEEEECCHHHHHHHHH
T ss_conf -59999999891749999999
No 322
>KOG1371 consensus
Probab=97.62 E-value=0.0011 Score=43.58 Aligned_cols=82 Identities=13% Similarity=0.152 Sum_probs=60.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCCCEEEEEE----CCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHH
Q ss_conf 973199984-98779999999996089872599963----9999999999873430245555573089943789899999
Q gi|254780742|r 1 MKKNVLIIG-AGGVAHVVAHKCAQNNDILGDINIAS----RTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVE 75 (419)
Q Consensus 1 M~k~ilv~G-aG~vG~~~~~~L~~~~~~~~~i~va~----r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~ 75 (419)
|-+.|||.| ||.+|+.++-.|.++.. .+++.| +..+.+.++..-+. ...++.+.+.|+.|.+.|++
T Consensus 1 ~~~~VLVtGgaGyiGsht~l~L~~~gy---~v~~vDNl~n~~~~sl~r~~~l~~------~~~~v~f~~~Dl~D~~~L~k 71 (343)
T KOG1371 1 GGKHVLVTGGAGYIGSHTVLALLKRGY---GVVIVDNLNNSYLESLKRVRQLLG------EGKSVFFVEGDLNDAEALEK 71 (343)
T ss_pred CCCEEEEECCCCCEEHHHHHHHHHCCC---CEEEEECCCCCCHHHHHHHHHHCC------CCCCEEEEEECCCCHHHHHH
T ss_conf 983799966876310599999986798---179982433212467788998627------87743899815668999999
Q ss_pred HHHHCCCCEEEECCCC
Q ss_conf 9975397299973761
Q gi|254780742|r 76 LIKKTNSQIIINVGSS 91 (419)
Q Consensus 76 ~~~~~~~dvVin~~~p 91 (419)
+++.++.|.|+.-++-
T Consensus 72 vF~~~~fd~V~Hfa~~ 87 (343)
T KOG1371 72 LFSEVKFDAVMHFAAL 87 (343)
T ss_pred HHHHCCCCEEEEEHHH
T ss_conf 9863388657762444
No 323
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=97.62 E-value=0.00039 Score=46.71 Aligned_cols=96 Identities=18% Similarity=0.258 Sum_probs=51.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
+..|+|+|.|+||+.+++.|++.. . .+|++-|-|---...+.+.+...... +-. ...+.+++.+++-+
T Consensus 30 ~~~V~VvGiGGVGSw~veALaRsG-i-g~itlID~D~v~vTN~NRQi~A~~~~-----iGk-----~Kv~vm~eri~~In 97 (263)
T COG1179 30 QAHVCVVGIGGVGSWAVEALARSG-I-GRITLIDMDDVCVTNTNRQIHALLGD-----IGK-----PKVEVMKERIKQIN 97 (263)
T ss_pred CCCEEEEECCCHHHHHHHHHHHCC-C-CEEEEEECHHCCCCCCCHHHHHHHHH-----CCC-----HHHHHHHHHHHHHC
T ss_conf 094899945845399999999818-8-81899712010222321266776623-----143-----78999999998619
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 7299973761003278999986288689
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
+..=|++.--|+...-...-+..+-+||
T Consensus 98 P~c~V~~~~~f~t~en~~~~~~~~~Dyv 125 (263)
T COG1179 98 PECEVTAINDFITEENLEDLLSKGFDYV 125 (263)
T ss_pred CCCEEEEHHHHHCHHHHHHHHCCCCCEE
T ss_conf 8746760576606856999816899879
No 324
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.62 E-value=0.00045 Score=46.23 Aligned_cols=80 Identities=18% Similarity=0.246 Sum_probs=62.8
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC--
Q ss_conf 1999849-8779999999996089872599963999999999987343024555557308994378989999999753--
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT-- 80 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-- 80 (419)
.|||-|. .++|...+..+.+..+ ++.++||+.+++.+..+.. +.+....+|+.|.+++++++...
T Consensus 7 TiLITGG~sGIGl~lak~f~elgN---~VIi~gR~e~~L~e~~~~~---------p~~~t~v~Dv~d~~~~~~lvewLkk 74 (245)
T COG3967 7 TILITGGASGIGLALAKRFLELGN---TVIICGRNEERLAEAKAEN---------PEIHTEVCDVADRDSRRELVEWLKK 74 (245)
T ss_pred EEEEECCCCHHHHHHHHHHHHHCC---EEEEECCCHHHHHHHHHCC---------CCHHEEEECCCCHHHHHHHHHHHHH
T ss_conf 799937964365999999998389---7999657499999998609---------4131565132035669999999986
Q ss_pred ---CCCEEEECCCCCCCH
Q ss_conf ---972999737610032
Q gi|254780742|r 81 ---NSQIIINVGSSFLNM 95 (419)
Q Consensus 81 ---~~dvVin~~~p~~~~ 95 (419)
+-+++||++|-...+
T Consensus 75 ~~P~lNvliNNAGIqr~~ 92 (245)
T COG3967 75 EYPNLNVLINNAGIQRNE 92 (245)
T ss_pred HCCCHHEEEECCCCCCHH
T ss_conf 298611343030003201
No 325
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.62 E-value=0.00018 Score=48.94 Aligned_cols=80 Identities=21% Similarity=0.223 Sum_probs=52.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 97319998498779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|+| |.|+|+|.||+.+++.|+. ... .++++-|+++++++..+-.+.........+ .... -..|.+. ++
T Consensus 1 M~K-V~IIGaG~VG~~~A~~l~~-~~~-~eivLiDi~~~~a~g~a~Dl~h~~~~~~~~-~~i~--~~~dy~~----~~-- 68 (313)
T PTZ00117 1 MKK-ISIIGSGQIGAIVGLLLLQ-ENL-GDVYLYDVIEGVPQGKALDLKHFSTIIGVN-ANIL--GTNNYED----IK-- 68 (313)
T ss_pred CCE-EEEECCCHHHHHHHHHHHH-CCC-CEEEEEECCCCHHHHHHHHHHHHHHCCCCC-CEEE--ECCCHHH----HC--
T ss_conf 978-9998979899999999970-899-879999588983088998877242036898-5798--3799999----68--
Q ss_pred CCCEEEECCCCC
Q ss_conf 972999737610
Q gi|254780742|r 81 NSQIIINVGSSF 92 (419)
Q Consensus 81 ~~dvVin~~~p~ 92 (419)
++|+||.++|..
T Consensus 69 daDiVVitAG~~ 80 (313)
T PTZ00117 69 DSDVIVITAGVQ 80 (313)
T ss_pred CCCEEEECCCCC
T ss_conf 999999898998
No 326
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.61 E-value=0.00015 Score=49.46 Aligned_cols=79 Identities=14% Similarity=0.148 Sum_probs=57.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
||.|+|||.||+.+++.|+.+.- ..++++-|++.++++..+..+....+.... ....+...|.+.+ + ++|
T Consensus 1 KI~IIGaG~VG~~~A~~l~~~~~-~~elvL~Di~~~~a~g~a~Dl~h~~~~~~~---~~~~~~~~~y~~~----~--~aD 70 (307)
T cd05290 1 KLVVIGAGHVGSAVLNYALALGL-FSEIVLIDVNEGVAEGEALDFHHATALTYS---TNTKIRAGDYDDC----A--DAD 70 (307)
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-CCEEEEEECCCCCCHHHHHHHHHHCCCCCC---CCEEECCCCHHHH----C--CCC
T ss_conf 98999969899999999985699-887999928898237999987612035899---8658667998994----6--999
Q ss_pred EEEECCCCC
Q ss_conf 999737610
Q gi|254780742|r 84 IIINVGSSF 92 (419)
Q Consensus 84 vVin~~~p~ 92 (419)
+||.++|..
T Consensus 71 iVVitaG~~ 79 (307)
T cd05290 71 IIVITAGPS 79 (307)
T ss_pred EEEECCCCC
T ss_conf 999867776
No 327
>COG0460 ThrA Homoserine dehydrogenase [Amino acid transport and metabolism]
Probab=97.61 E-value=0.0014 Score=42.87 Aligned_cols=149 Identities=11% Similarity=0.135 Sum_probs=89.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC--------CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHH
Q ss_conf 97319998498779999999996089--------8725999639999999999873430245555573089943789899
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNND--------ILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKA 72 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~--------~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~ 72 (419)
|.-+|.|+|.|.||+.+++.|.++.+ ...-..|++|+..+.+.+ .+. .++..+-|.... .
T Consensus 2 ~~v~v~l~G~G~VG~~~~~il~~~~~~l~~~~g~~i~v~~v~~~~~~~~~~~--~~~---------~~~~~~~~~~~~-~ 69 (333)
T COG0460 2 KTVKVGLLGLGTVGSGVLEILAEKQEELRKRAGIEIRVVAVADRDGSLVRDL--DLL---------NAEVWTTDGALS-L 69 (333)
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC--CCC---------CHHHHEECCCCC-C
T ss_conf 5489999833714299999999826888763287269999996153011356--653---------323430055324-4
Q ss_pred HHHHHHHCCCCEEEECCCCCC--CH--HHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 999997539729997376100--32--78999986288689603664200001442000035775108888518869953
Q gi|254780742|r 73 VVELIKKTNSQIIINVGSSFL--NM--SVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILG 148 (419)
Q Consensus 73 l~~~~~~~~~dvVin~~~p~~--~~--~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~ 148 (419)
-.+++.....|+|+.+.+... .. ...+.++++|.|.|...= ..+.....++.+.|+++|+.+.-+
T Consensus 70 ~~~~~~~~~~dvvve~~~~d~~~~~~~~~~~~al~~GkhVVTaNK-----------~~lA~~~~el~~~A~~~g~~l~yE 138 (333)
T COG0460 70 GDEVLLDEDIDVVVELVGGDVEPAEPADLYLKALENGKHVVTANK-----------ALLALHYHELREAAEKNGVKLLYE 138 (333)
T ss_pred CHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCCC-----------HHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf 276650456887985576668741238999999975996997896-----------476766999999999739858998
Q ss_pred CCHHHHHHHHHHHHHHHHHC--CCCCEEE
Q ss_conf 75011148899999999743--6663897
Q gi|254780742|r 149 AGFDPGVVNAFARLAQDEYF--DKITDID 175 (419)
Q Consensus 149 ~G~~PGl~~lla~~~~~~~~--d~~~~i~ 175 (419)
+-+..|+.=+-+ .++.+ +++.++.
T Consensus 139 AtV~gGiPiI~~---lr~~l~g~~I~~i~ 164 (333)
T COG0460 139 ATVGGGIPIIKL---LRELLAGDEILSIR 164 (333)
T ss_pred EEECCCCCHHHH---HHHHCCCCCEEEEE
T ss_conf 550257543789---87412657269999
No 328
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.61 E-value=0.00029 Score=47.58 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=56.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
|||.|+|+|.||+.++..|+.+.- ..++++-|+++++++..+-.|....... .....+ -..+.+. ++ ++
T Consensus 1 rKI~IIGaG~VG~~~a~~l~~~~l-~~el~L~Di~~~~a~G~a~DL~~~~~~~-~~~~~i---~~~~~~~----~~--~a 69 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGI-ADELVLIDINEEKAEGEALDLEDALAFL-PSPVKI---KAGDYSD----CK--DA 69 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-CCEEEEECCCCCCCHHHHHHHHHHHHHC-CCCEEE---EECCHHH----HC--CC
T ss_conf 959999969889999999985799-8779998189870176999887013305-997399---6088788----47--89
Q ss_pred CEEEECCCCC
Q ss_conf 2999737610
Q gi|254780742|r 83 QIIINVGSSF 92 (419)
Q Consensus 83 dvVin~~~p~ 92 (419)
|+||.++|..
T Consensus 70 DvvVitAG~~ 79 (306)
T cd05291 70 DIVVITAGAP 79 (306)
T ss_pred CEEEECCCCC
T ss_conf 9999906766
No 329
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=97.61 E-value=0.0021 Score=41.69 Aligned_cols=37 Identities=24% Similarity=0.267 Sum_probs=13.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHH
Q ss_conf 199984987799999999960898725999639999999
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCS 42 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~ 42 (419)
+|+|+|+|.+|..++.. ++.... .++++.|++.+|++
T Consensus 179 ~VlV~GaG~iGl~a~~~-ak~~Ga-~~Vi~~d~~~~rl~ 215 (358)
T TIGR03451 179 SVAVIGCGGVGDAAIAG-AALAGA-SKIIAVDIDDRKLE 215 (358)
T ss_pred EEEEECCCHHHHHHHHH-HHHCCC-CEEEEEECCHHHHH
T ss_conf 89996737699999999-998399-18999919889999
No 330
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.60 E-value=0.0001 Score=50.63 Aligned_cols=47 Identities=15% Similarity=0.226 Sum_probs=39.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 97319998498779999999996089872599963999999999987343
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYK 50 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~ 50 (419)
|-|+|.|+|||.||+.+|..++... .++++.|++++.+++..+.+..
T Consensus 1 mIkkV~ViGaG~MG~~IA~~~a~~G---~~V~l~D~~~e~l~~~~~~i~~ 47 (289)
T PRK09260 1 MMEKIVVVGAGVMGRGIAYVFASSG---FQTTLVDISQEQLASAQQEIES 47 (289)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHHHHH
T ss_conf 9676999796887899999999689---9889997998999999999999
No 331
>PRK06823 ornithine cyclodeaminase; Validated
Probab=97.60 E-value=0.00094 Score=44.11 Aligned_cols=102 Identities=14% Similarity=0.118 Sum_probs=73.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+.+.|+|+|..++.-++.+..-.+. .++.|.+|+.++++++++.+... .+++... .+.+ +.++ ++
T Consensus 129 ~~l~iiGtG~QA~~~l~a~~~v~~i-~~v~v~~r~~~~~~~f~~~~~~~-------~~~v~~~--~~~~---eav~--~A 193 (315)
T PRK06823 129 KAIGIVGTGIQARMQLMYLKNVTDC-RQLWVWGRSETALEEYRQYAQAL-------GFAVNTT--LDAA---EVAH--AA 193 (315)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCC-EEEEEECCCHHHHHHHHHHHHHC-------CCCEEEE--CCHH---HHHH--HC
T ss_conf 5699977189999999999871871-09999469979999999999861-------9907994--8999---9974--27
Q ss_pred CEEEECCCCCCCHHHH-HHHHHCCCCEEEECCCCCCHHCC
Q ss_conf 2999737610032789-99986288689603664200001
Q gi|254780742|r 83 QIIINVGSSFLNMSVL-RACIDSNVAYIDTAIHESPLKIC 121 (419)
Q Consensus 83 dvVin~~~p~~~~~v~-~a~i~~g~hyvD~s~~~~~~~~~ 121 (419)
|+|+.+.+. - .+++ ...+..|+|..-++.+.+.++++
T Consensus 194 DIIvtaT~s-~-~Pv~~~~~lkpG~hi~~iGs~~p~~~El 231 (315)
T PRK06823 194 NLIVTTTPS-R-EPLLQAEDIQPGTHITAVGADSPGKQEL 231 (315)
T ss_pred CEEEEEECC-C-CCCCCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 747988789-9-9641655578996798427999411004
No 332
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=97.59 E-value=0.00075 Score=44.74 Aligned_cols=75 Identities=17% Similarity=0.278 Sum_probs=53.2
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-C
Q ss_conf 1999849-8779999999996089872599963999999999987343024555557308994378989999999753-9
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT-N 81 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~ 81 (419)
||||.|+ +++|+.+++.|+++... ..+....|+. . .....+++...++|+.|.++++++.++. +
T Consensus 2 nVLITGas~GIG~aia~~l~~~~~~-~~v~~~~~~~-~------------~~~~~~~v~~~~~Dvt~~~~i~~~~~~~~~ 67 (235)
T PRK09009 2 NILIVGGSGGIGKAMVKQLLETYPD-ATVHATYRHH-K------------PDFRHDNVQWHALDVTDEAEIKQLSEQFTQ 67 (235)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCC-EEEEEEECCC-C------------CCCCCCCEEEEECCCCCHHHHHHHHHHHCC
T ss_conf 7999755639999999999856998-0999973776-5------------444579838998747999999999987087
Q ss_pred CCEEEECCCCC
Q ss_conf 72999737610
Q gi|254780742|r 82 SQIIINVGSSF 92 (419)
Q Consensus 82 ~dvVin~~~p~ 92 (419)
.|++||++|-.
T Consensus 68 iD~linnAGi~ 78 (235)
T PRK09009 68 LDWLINCVGML 78 (235)
T ss_pred CCEEEECCCCC
T ss_conf 78999767524
No 333
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=97.59 E-value=0.0016 Score=42.45 Aligned_cols=142 Identities=11% Similarity=0.107 Sum_probs=84.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHH-HHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 9731999849-87799999999960898725999639999999-999873430245555573089943789899999997
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCS-KIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
|.-+|.|.|| |.||+.+++.+.+..+. .-...-+|..+... .-+.++. .+....+-+.|. +.. .
T Consensus 1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~-~L~aa~~~~~~~~~g~d~ge~~---------g~~~~gv~v~~~--~~~--~ 66 (266)
T COG0289 1 SMIKVAVAGASGRMGRTLIRAVLEAPDL-ELVAAFDRPGSLSLGSDAGELA---------GLGLLGVPVTDD--LLL--V 66 (266)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCC-EEEEEEECCCCCCCCCCHHHHC---------CCCCCCCEEECC--HHH--C
T ss_conf 9736999757872789999998528994-6999981378422343112321---------446557332063--433--0
Q ss_pred HCCCCEEEECCCCCCCHHHHHHHHHCCCCEEE-ECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
Q ss_conf 53972999737610032789999862886896-03664200001442000035775108888518869953750111488
Q gi|254780742|r 79 KTNSQIIINVGSSFLNMSVLRACIDSNVAYID-TAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVN 157 (419)
Q Consensus 79 ~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD-~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ 157 (419)
...+|++|+-.-|--....++.|++++++.|- +|+.++ +...++.+.+++.++.+-+++.+---+-.
T Consensus 67 ~~~~DV~IDFT~P~~~~~~l~~~~~~~~~lVIGTTGf~~------------e~~~~l~~~a~~v~vv~a~NfSiGvnll~ 134 (266)
T COG0289 67 KADADVLIDFTTPEATLENLEFALEHGKPLVIGTTGFTE------------EQLEKLREAAEKVPVVIAPNFSLGVNLLF 134 (266)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCH------------HHHHHHHHHHHHCCEEEECCCHHHHHHHH
T ss_conf 468988998998254699999999769986997999998------------99999999985389899656407999999
Q ss_pred HHHHHHHHHHCC
Q ss_conf 999999997436
Q gi|254780742|r 158 AFARLAQDEYFD 169 (419)
Q Consensus 158 lla~~~~~~~~d 169 (419)
-++..+++ .++
T Consensus 135 ~l~~~aak-~l~ 145 (266)
T COG0289 135 KLAEQAAK-VLD 145 (266)
T ss_pred HHHHHHHH-HCC
T ss_conf 99999998-667
No 334
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.58 E-value=0.00072 Score=44.88 Aligned_cols=79 Identities=16% Similarity=0.278 Sum_probs=58.2
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
||-++|+|.||+++++-|.+......++.+.+||.++++.+.+.... +.+ . .|.. ++++ ++|
T Consensus 2 kIgfIG~GnMg~Aii~Gl~~~~~~~~~i~v~~r~~~~~~~l~~~~~~---------v~~---~-~~n~---~~~~--~~d 63 (255)
T PRK06476 2 RIGFIGTGAITEAMVTGLLSSPADVSEIIVSPRNAQIAARLAARFAK---------VRI---A-KDNQ---AVVD--RSD 63 (255)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCC---------EEE---E-CCHH---HHHH--HCC
T ss_conf 89998646999999999997889925088989898999999987695---------598---5-7889---9985--188
Q ss_pred EEEECCCCCCCHHHHHH
Q ss_conf 99973761003278999
Q gi|254780742|r 84 IIINVGSSFLNMSVLRA 100 (419)
Q Consensus 84 vVin~~~p~~~~~v~~a 100 (419)
+|+-|+-|..-..|++.
T Consensus 64 vi~LaVKP~~~~~vl~~ 80 (255)
T PRK06476 64 VVFLAVRPQIAEEVLRA 80 (255)
T ss_pred EEEEEECHHHHHHHHHH
T ss_conf 78886178889988776
No 335
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.58 E-value=0.0013 Score=43.11 Aligned_cols=141 Identities=13% Similarity=0.060 Sum_probs=79.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|. +|-|+|| |.||+..++.|..|+.. .-..++++ .+.-+.+.+-.+.... ........ .+.+.+. .
T Consensus 1 m~-kVaIvGAtG~vG~eli~lL~~hp~~-ei~~las~-~saGk~i~~~~p~l~~---~~~~~~~~---~~~~~~~---~- 67 (345)
T PRK00436 1 MI-KVAIVGASGYTGGELLRLLLNHPEV-EIVYLTSR-SSAGKPLSDLHPHLRG---LVDLVLEP---LDPEEIA---A- 67 (345)
T ss_pred CC-EEEEECCCCHHHHHHHHHHHCCCCC-EEEEEECC-CCCCCCHHHHCCCCCC---CCCCEEEE---CCHHHHC---C-
T ss_conf 91-9999896618899999999809986-79999757-8689737785811037---77874764---9988942---6-
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCC--------------CCCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 397299973761003278999986288689603664200001--------------442000035775108888518869
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKIC--------------ESPPWYNNYEWSLLDECRTKSITA 145 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~--------------~~~~~~~~~~~~l~~~a~~ag~~~ 145 (419)
++|+|+.|+|.-.-..++..+.++|+..||+|.+...-... ....|.+..-.-..++-+.+...+
T Consensus 68 -~~Divf~alp~~~S~~~~~~~~~~g~~VID~SsdfR~~~~~~~~~~Y~~~h~~~~l~~~~vYGlPE~n~~~ik~~~iIA 146 (345)
T PRK00436 68 -GADVVFLALPHGVSMELAPQLLEAGVKVIDLSADFRLKDPEVYEKWYGFEHAAPELLKEAVYGLPELNREEIKGARLIA 146 (345)
T ss_pred -CCCEEEECCCHHHHHHHHHHHHHCCCEEEECCHHHHCCCCCCHHHCCCCCCCCHHHHHHHEECCHHHHHHHHHHCCEEC
T ss_conf -9999998898389999999998669879989701203676432210587778844632220076024366663255600
Q ss_pred EECCCHHHHH
Q ss_conf 9537501114
Q gi|254780742|r 146 ILGAGFDPGV 155 (419)
Q Consensus 146 i~~~G~~PGl 155 (419)
-|+|=....+
T Consensus 147 NPgC~at~~~ 156 (345)
T PRK00436 147 NPGCYPTASL 156 (345)
T ss_pred CCCCHHHHHH
T ss_conf 7994789999
No 336
>pfam03807 F420_oxidored NADP oxidoreductase coenzyme F420-dependent.
Probab=97.56 E-value=0.00048 Score=46.05 Aligned_cols=89 Identities=19% Similarity=0.152 Sum_probs=59.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
+|-++|+|.||+.++.-|.+... ..+.+.+|++++++.+++++... .. ..|. .++++ .+|
T Consensus 1 KIg~IG~G~mg~ai~~~l~~~g~--~~~~~~~r~~~~~~~~~~~~~~~----------~~---~~~~---~~~~~--~~D 60 (93)
T pfam03807 1 KIGIIGAGNMGEALARGLAAAGH--EVIIANSRNPEKAAALAEELGVG----------AT---AVSN---EEAAE--EAD 60 (93)
T ss_pred CEEEECCHHHHHHHHHHHHHCCC--CCEEEECCCHHHHHHHHHHHCCC----------CC---CCCH---HHHHH--CCC
T ss_conf 98999700999999999997799--61278648789999999981997----------64---5899---99974--499
Q ss_pred EEEECCCCCCCHHHHHHHH--HCCCCEEEEC
Q ss_conf 9997376100327899998--6288689603
Q gi|254780742|r 84 IIINVGSSFLNMSVLRACI--DSNVAYIDTA 112 (419)
Q Consensus 84 vVin~~~p~~~~~v~~a~i--~~g~hyvD~s 112 (419)
+|+-|++|..-..+++.-. -.+.-.|+++
T Consensus 61 vIilavkp~~~~~vl~~i~~~~~~k~vISv~ 91 (93)
T pfam03807 61 VVILAVKPEDAPEVLAELADLLKGKLVISIT 91 (93)
T ss_pred EEEEEECHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 8999979999999999876250899999809
No 337
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.56 E-value=0.00066 Score=45.12 Aligned_cols=77 Identities=12% Similarity=0.233 Sum_probs=54.3
Q ss_pred CEEEEEC--CC-HHHHHHHHHHHHCCCCCCEEEEEE---CCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 3199984--98-779999999996089872599963---99999999998734302455555730899437898999999
Q gi|254780742|r 3 KNVLIIG--AG-GVAHVVAHKCAQNNDILGDINIAS---RTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVEL 76 (419)
Q Consensus 3 k~ilv~G--aG-~vG~~~~~~L~~~~~~~~~i~va~---r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~ 76 (419)
|++||-| ++ ++|..+++.|++..- ++++.+ +..++++++.+++. .....++|+.|.+++.++
T Consensus 7 K~~lVTGa~~~~GIG~aia~~la~~Ga---~v~~~~~~~~~~~~~~~~~~~~g---------~~~~~~~Dv~~~~~v~~~ 74 (261)
T PRK08690 7 KKILITGMISERSIAYGIAKACREQGA---ELAFTYVVDKLEERVRKMAAELD---------SELVFRCDVASDDEINQV 74 (261)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHCC---------CCEEEECCCCCHHHHHHH
T ss_conf 889998987863899999999998599---99997376155999999998739---------808998899999999999
Q ss_pred HHHC-----CCCEEEECCCC
Q ss_conf 9753-----97299973761
Q gi|254780742|r 77 IKKT-----NSQIIINVGSS 91 (419)
Q Consensus 77 ~~~~-----~~dvVin~~~p 91 (419)
+.+. +.|++||.+|-
T Consensus 75 ~~~~~~~~G~iD~LVnnaG~ 94 (261)
T PRK08690 75 FADLGKHWDGLDGLVHSIGF 94 (261)
T ss_pred HHHHHHHHCCCCEEEECCCC
T ss_conf 99999996898789752554
No 338
>pfam01113 DapB_N Dihydrodipicolinate reductase, N-terminus. Dihydrodipicolinate reductase (DapB) reduces the alpha,beta-unsaturated cyclic imine, dihydro-dipicolinate. This reaction is the second committed step in the biosynthesis of L-lysine and its precursor meso-diaminopimelate, which are critical for both protein and cell wall biosynthesis. The N-terminal domain of DapB binds the dinucleotide NADPH.
Probab=97.55 E-value=0.00039 Score=46.66 Aligned_cols=116 Identities=11% Similarity=0.111 Sum_probs=66.2
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 1999849-877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+|.|.|| |.||+.+++.+.++.+. .-....+|+... .....+.... ......++ ..+..... ++
T Consensus 2 kV~i~Ga~GrMG~~i~~~i~~~~~~-~lv~~~~~~~~~--~~~~d~~~~~------~~~~~~~~----~~~~~~~~--~~ 66 (122)
T pfam01113 2 KVAVVGASGRMGRELIKAILEAPDF-ELVAAVDRPGSS--LLGSDAGELA------GPLGVPVT----DDLEEVLA--DA 66 (122)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCC-EEEEEEECCCCC--CCCCCCCCCC------CCCCCEEC----CCHHHHCC--CC
T ss_conf 8999889887899999999858996-899999438961--2254310014------67871112----44777515--78
Q ss_pred CEEEECCCCCCCHHHHHHHHHCCCCEEE-ECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 2999737610032789999862886896-036642000014420000357751088885188699
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACIDSNVAYID-TAIHESPLKICESPPWYNNYEWSLLDECRTKSITAI 146 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~~g~hyvD-~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i 146 (419)
|+||.-.-|..-...++.|+++|+++|- +||.++ +.+..+.+.+++..+..-
T Consensus 67 DVvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG~s~------------~~~~~i~~~a~~ipi~~a 119 (122)
T pfam01113 67 DVLIDFTTPEATLENLELALKHGKPLVIGTTGFTE------------EQLAELKEAAKKIPIVIA 119 (122)
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCH------------HHHHHHHHHHCCCCEEEC
T ss_conf 88999068789999999999679988998999999------------999999998445988982
No 339
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.54 E-value=0.0003 Score=47.49 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=55.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
||.|+|||.||+.++..|+.+.- ..++++-|++.++++..+..|....+.. ... .+-..|.+. ++ ++|
T Consensus 2 KI~IIGaG~VG~~~A~~l~~~~l-~~el~L~Di~~~~a~g~a~DL~~a~~~~--~~~---~i~~~~~~~----l~--daD 69 (308)
T cd05292 2 KVAIVGAGFVGSTTAYALLLRGL-ASEIVLVDINKAKAEGEAMDLAHGTPFV--KPV---RIYAGDYAD----CK--GAD 69 (308)
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-CCEEEEEECCCCCCHHHHHHHHHHCCCC--CCC---EEEECCHHH----HC--CCC
T ss_conf 79999948889999999986799-8879999188984512568766241036--881---684099999----77--999
Q ss_pred EEEECCCCC
Q ss_conf 999737610
Q gi|254780742|r 84 IIINVGSSF 92 (419)
Q Consensus 84 vVin~~~p~ 92 (419)
+||.++|..
T Consensus 70 vVVitaG~~ 78 (308)
T cd05292 70 VVVITAGAN 78 (308)
T ss_pred EEEECCCCC
T ss_conf 999899999
No 340
>KOG1198 consensus
Probab=97.54 E-value=0.0011 Score=43.65 Aligned_cols=99 Identities=23% Similarity=0.266 Sum_probs=64.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH-
Q ss_conf 731999849-877999999999608987259996399999999998734302455555730899437898999999975-
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK- 79 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~- 79 (419)
.+.|||+|+ |+||+.+++ |+++.. . ..+++.++.++.+ +++++.. ...+|..+.+- .+.+++
T Consensus 158 g~~vLv~ggsggVG~~aiQ-lAk~~~-~-~~v~t~~s~e~~~-l~k~lGA-----------d~vvdy~~~~~-~e~~kk~ 221 (347)
T KOG1198 158 GKSVLVLGGSGGVGTAAIQ-LAKHAG-A-IKVVTACSKEKLE-LVKKLGA-----------DEVVDYKDENV-VELIKKY 221 (347)
T ss_pred CCEEEEEECCCHHHHHHHH-HHHHCC-C-CEEEEEECCCCHH-HHHHCCC-----------CCCCCCCCHHH-HHHHHHH
T ss_conf 9869999387489999999-998749-7-4799981554168-9997299-----------65124885779-9998762
Q ss_pred --CCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECCCCC
Q ss_conf --3972999737610-032789999862886896036642
Q gi|254780742|r 80 --TNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAIHES 116 (419)
Q Consensus 80 --~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~~~~ 116 (419)
.+.|+|+.|++.. ....+-..+...+.+|+.+.+...
T Consensus 222 ~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~ 261 (347)
T KOG1198 222 TGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDEL 261 (347)
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHCCCCCCEEEEECCCCC
T ss_conf 2788509998888973243234332378726999437765
No 341
>PRK06392 homoserine dehydrogenase; Provisional
Probab=97.54 E-value=0.0015 Score=42.71 Aligned_cols=154 Identities=17% Similarity=0.166 Sum_probs=85.0
Q ss_pred EEEEECCCHHHHHHHHHHHHCC-----CCCCE-EEEEECCHHHHHH----HHHHHHHHCCCCCCCCCEEEEECCCCHHHH
Q ss_conf 1999849877999999999608-----98725-9996399999999----998734302455555730899437898999
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNN-----DILGD-INIASRTLQKCSK----IIDSIYKKKSLKIDGKLAIHQVDALNIKAV 73 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~-----~~~~~-i~va~r~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l 73 (419)
+|.++|+|.||+.+++.|.++. ....+ +.++++....... +.+.+.. .....+. ..|.... ..
T Consensus 2 ~I~l~G~G~VG~~v~~~l~~~~~~~~~~~~i~vv~v~~s~~~~~~~~gid~~~~~~~----~~~~~~~--~~~~~~~-~~ 74 (326)
T PRK06392 2 RISIIGLGNVGLNVLRIIKSRNDDRRNNNGISVVSVSDSKLSYYNERGLDIGKIISY----KEKGRLE--EIDYEKI-KF 74 (326)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCCCCCHHHHHCC----CCCCCCC--CCCHHCC-CH
T ss_conf 799995788999999999974999984899379999961010146568898885212----2323444--4420004-44
Q ss_pred HHHHHHCCCCEEEECCCCCC----CHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 99997539729997376100----32789999862886896036642000014420000357751088885188699537
Q gi|254780742|r 74 VELIKKTNSQIIINVGSSFL----NMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGA 149 (419)
Q Consensus 74 ~~~~~~~~~dvVin~~~p~~----~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~ 149 (419)
...+ +..+|+++.+.|... .+...+.|+++|+|.|...= ..+.....+|-+.|+++|+.+.-++
T Consensus 75 ~~~~-~~~~dvive~~~~~~~g~~~~~~~~~aL~~GkhVVTANK-----------~~la~~~~eL~~lA~~~~~~~~yEA 142 (326)
T PRK06392 75 DEIF-EIKPDVIVDVTPASKDGIREKNLYINAFEHGIDVVTANK-----------SGLANHWHDIMDSASKNRRIIRYEA 142 (326)
T ss_pred HHHH-CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCC-----------CHHHHHHHHHHHHHHHHCCEEEEEE
T ss_conf 5664-568987999302775442269999999987996997796-----------0666619999999998098499975
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 5011148899999999743666389763
Q gi|254780742|r 150 GFDPGVVNAFARLAQDEYFDKITDIDII 177 (419)
Q Consensus 150 G~~PGl~~lla~~~~~~~~d~~~~i~~~ 177 (419)
-+..|+.=+-..... -..+++.+|.-.
T Consensus 143 sV~gGiPii~~l~~~-l~~~~I~~i~GI 169 (326)
T PRK06392 143 TVAGGVPLFSLRDYS-TLPSRIKNFRGI 169 (326)
T ss_pred EECCCCHHHHHHHHH-HHCCCCEEEEEE
T ss_conf 403662317988867-646885079999
No 342
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=97.53 E-value=0.0015 Score=42.76 Aligned_cols=92 Identities=12% Similarity=0.104 Sum_probs=67.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCC-CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 319998498779999999996089-8725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNND-ILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~-~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.+|.++|+|.||+.++.-|.+... ...+|.+.+|+.++.+.+++.++.. . ..|... .+. .
T Consensus 2 ~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g~~----------~----~~~~~~---~~~--~ 62 (266)
T COG0345 2 MKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYGVV----------T----TTDNQE---AVE--E 62 (266)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCC----------C----CCCHHH---HHH--H
T ss_conf 65899846889999999999668998023898379999999999984985----------5----686798---874--0
Q ss_pred CCEEEECCCCCCCHHHHHHHH--HCCCCEEEECC
Q ss_conf 729997376100327899998--62886896036
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACI--DSNVAYIDTAI 113 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i--~~g~hyvD~s~ 113 (419)
+|+|+-++-|..-..++..+- ..+...|.+.-
T Consensus 63 advv~LavKPq~~~~vl~~l~~~~~~~lvISiaA 96 (266)
T COG0345 63 ADVVFLAVKPQDLEEVLSKLKPLTKDKLVISIAA 96 (266)
T ss_pred CCEEEEEECHHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 8989998482768999997323568887999707
No 343
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.52 E-value=0.0018 Score=42.18 Aligned_cols=94 Identities=16% Similarity=0.177 Sum_probs=60.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 97319998498779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|-++|+|+|.|.+|..++..|.+... ..+|+..|+|.+.++...+ ++- +|-. .+.+.+.++
T Consensus 5 ~f~~I~IiGlGLIGgSlA~alk~~~~-~~~I~g~d~~~~~l~~A~~-~g~--------------id~~-~~~~~e~~~-- 65 (307)
T PRK07502 5 LFDRVALIGLGLIGSSLARAIRRQGL-AGEIVGAARSAETRARARE-LGL--------------GDRV-TTSAAEAVK-- 65 (307)
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCC-CCEEEEEECCHHHHHHHHH-CCC--------------CCHH-CCCHHHHHC--
T ss_conf 45668999278799999999985499-8579998499999999998-699--------------7511-277766404--
Q ss_pred CCCEEEECCCCCCCHHHHHHH---HHCCCCEEEECC
Q ss_conf 972999737610032789999---862886896036
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRAC---IDSNVAYIDTAI 113 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~---i~~g~hyvD~s~ 113 (419)
++|+||-|+|+..-..+++.. +..++=..|++.
T Consensus 66 ~~DlIilatPv~~~~~vl~~l~~~l~~~~ivTDvgS 101 (307)
T PRK07502 66 GADLVILCVPVGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 589799917899999999999855589968996632
No 344
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=97.52 E-value=0.002 Score=41.92 Aligned_cols=13 Identities=0% Similarity=-0.184 Sum_probs=5.3
Q ss_pred CEEEEEECCHHHH
Q ss_conf 2599963999999
Q gi|254780742|r 29 GDINIASRTLQKC 41 (419)
Q Consensus 29 ~~i~va~r~~~~~ 41 (419)
.++.-++.+...+
T Consensus 30 Vkv~a~gic~sDl 42 (341)
T PRK05396 30 IKVKKTAICGTDV 42 (341)
T ss_pred EEEEEEEECHHHH
T ss_conf 9999998878898
No 345
>TIGR00715 precor6x_red precorrin-6x reductase; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase . In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase . There are at least two distinct cobalamin biosynthetic pathways in bacteria : Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway ; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis ; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) . There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y , .; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process.
Probab=97.52 E-value=0.00036 Score=46.88 Aligned_cols=97 Identities=19% Similarity=0.320 Sum_probs=78.5
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHH-HHHHHHHCCC
Q ss_conf 199984987799999999960898725999639999999999873430245555573089943789899-9999975397
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKA-VVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~-l~~~~~~~~~ 82 (419)
+|+++|.+.=++.++..|..+.+.+.-.+++.+...++-.. .......+-..|.++ |++++++++.
T Consensus 2 ~vll~GGT~dsr~~~~~L~~~~~~~i~~t~tt~~~~~l~~~-------------~~a~~v~~gaL~~~EGL~~~l~~~~i 68 (260)
T TIGR00715 2 SVLLMGGTKDSRAIAKKLRALGDVEILVTVTTEEGKKLLEI-------------SQASKVVTGALDKDEGLRELLKEESI 68 (260)
T ss_pred EEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCC-------------CCCCCEEECCCCCCCCHHHHHHHCCC
T ss_conf 68997177789999974037875899987415776300100-------------37771587574888753788864496
Q ss_pred CEEEECCCCC---CCHHHHHHHHHCCCCEEEECC
Q ss_conf 2999737610---032789999862886896036
Q gi|254780742|r 83 QIIINVGSSF---LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 83 dvVin~~~p~---~~~~v~~a~i~~g~hyvD~s~ 113 (419)
|++|++.=|| ....+++.|-|.++.||=..-
T Consensus 69 ~~~vDAtHPFA~~~t~~a~~vc~E~~~~YvrfeR 102 (260)
T TIGR00715 69 DILVDATHPFAAQITKNALEVCKELGIPYVRFER 102 (260)
T ss_pred CEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 3898579735899999999999761981799608
No 346
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.51 E-value=0.00058 Score=45.52 Aligned_cols=72 Identities=15% Similarity=0.127 Sum_probs=56.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|.+||-|+ +++|+.+++.|++... ++++.||+.+.+.. -...+.|+.|.+++.+++.+.
T Consensus 5 gK~alVTG~s~GIG~aia~~la~~GA---~V~~~d~~~~~~~~----------------~~~~~~D~~~~~~v~~~v~~~ 65 (261)
T PRK12428 5 GKTIVVTGVASGIGAEVARLLRFLGA---RVIGLDRRPPGMTL----------------DGFHQADLGDPASIDAAVAAL 65 (261)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCCCC----------------CCEEECCCCCHHHHHHHHHHH
T ss_conf 98899978577999999999998699---99999688554561----------------317673789999999999983
Q ss_pred --CCCEEEECCCCC
Q ss_conf --972999737610
Q gi|254780742|r 81 --NSQIIINVGSSF 92 (419)
Q Consensus 81 --~~dvVin~~~p~ 92 (419)
+.|+++|+++-.
T Consensus 66 ~g~id~lvn~Ag~~ 79 (261)
T PRK12428 66 PGRIDALFNVAGVP 79 (261)
T ss_pred CCCCCEEEECCCCC
T ss_conf 79887899867778
No 347
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=97.50 E-value=0.0023 Score=41.53 Aligned_cols=87 Identities=20% Similarity=0.294 Sum_probs=58.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHH--HHHHHHHHHHHCCCCCCCCCEEEEECCCC-HHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999--99999873430245555573089943789-8999999
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQK--CSKIIDSIYKKKSLKIDGKLAIHQVDALN-IKAVVEL 76 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~D~~d-~~~l~~~ 76 (419)
+.|.|||.|+ +++|..++..|+++.. ++++..|+.+. ++.+.+... ... .......++|+.+ .+++..+
T Consensus 4 ~~k~vlITGas~GiG~aia~~l~~~G~---~v~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~Dv~~~~~~v~~~ 76 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGA---RVVVAARRSEEEAAEALAAAIK-EAG---GGRAAAVAADVSDDEESVEAL 76 (251)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCHHHHHHHHHHHH-HCC---CCCEEEEEEECCCCHHHHHHH
T ss_conf 998899989887189999999998899---7999967973516999999975-457---872799972089999999999
Q ss_pred HHHC-----CCCEEEECCCCCCC
Q ss_conf 9753-----97299973761003
Q gi|254780742|r 77 IKKT-----NSQIIINVGSSFLN 94 (419)
Q Consensus 77 ~~~~-----~~dvVin~~~p~~~ 94 (419)
+... +.|++||.+|....
T Consensus 77 ~~~~~~~~g~idvlvnnAg~~~~ 99 (251)
T COG1028 77 VAAAEEEFGRIDILVNNAGIAGP 99 (251)
T ss_pred HHHHHHHCCCCCEEEECCCCCCC
T ss_conf 99999971998799999867645
No 348
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.49 E-value=0.0011 Score=43.76 Aligned_cols=89 Identities=15% Similarity=0.184 Sum_probs=57.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 97319998498779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|+|+|+|+|.|..|..++++|.+.. .++++.|.+........+.+. +... ...+. .+.+.
T Consensus 16 l~~kvlV~GlG~SG~s~a~~L~~~G---~~v~~~D~~~~~~~~~~~~~~----------~~~~--~~~~~---~~~~~-- 75 (476)
T PRK00141 16 LRGRVLVAGAGVSGLGIAKMLSELG---CDVVVADDNETQRHMLIEVVD----------VADI--STAQA---SDALD-- 75 (476)
T ss_pred HCCCEEEEEECHHHHHHHHHHHHCC---CEEEEEECCCCHHHHHHHHCC----------CCEE--CCCCH---HHHHC--
T ss_conf 6998899922788999999999789---979999899870357887479----------8565--15530---65646--
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 97299973761003278999986288689
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
++|+||-.-|-..+.++++.+.+.|++.+
T Consensus 76 ~~d~vV~SPGI~~~~p~l~~a~~~gi~vi 104 (476)
T PRK00141 76 SYSIVVTSPGWRPDSPLLVDAQSAGLEVI 104 (476)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHCCCCEE
T ss_conf 89999989978997999999998799577
No 349
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.48 E-value=0.0014 Score=42.99 Aligned_cols=93 Identities=18% Similarity=0.219 Sum_probs=68.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 31999849-87799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.+|||.|+ |.+|+.+++.|.++. .++.++-|+.+++.... ..++....|..+++.+...+++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~---~~v~~~~r~~~~~~~~~------------~~v~~~~~d~~~~~~l~~~~~G-- 63 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARG---HEVRAAVRNPEAAAALA------------GGVEVVLGDLRDPKSLVAGAKG-- 63 (275)
T ss_pred CCEEEECCCCCHHHHHHHHHHHCC---CEEEEECCCCHHHHHCC------------CCCEEECCCCCCCHHHHHHHCC--
T ss_conf 938998677757999999999759---86999736822111103------------7852884564160779998489--
Q ss_pred CCEEEECCCC------C---CCHHHHHHHHHCC---CCEEEEC
Q ss_conf 7299973761------0---0327899998628---8689603
Q gi|254780742|r 82 SQIIINVGSS------F---LNMSVLRACIDSN---VAYIDTA 112 (419)
Q Consensus 82 ~dvVin~~~p------~---~~~~v~~a~i~~g---~hyvD~s 112 (419)
.+.++++.+. + .+..++.++..++ .|++-++
T Consensus 64 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s 106 (275)
T COG0702 64 VDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLS 106 (275)
T ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 4179995254556630120036789999986274424326875
No 350
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=97.48 E-value=0.00064 Score=45.21 Aligned_cols=79 Identities=14% Similarity=0.205 Sum_probs=52.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
++||.|+|+|.||+.++..|.. ... .+++|-|++.++++..+-.+......... .... .-..|.+. ++ +
T Consensus 7 ~~KV~IIGaG~VG~~~A~~l~~-~~l-~eivLiDi~~~~a~g~a~Dl~h~~~~~~~-~~~v--~~~~dy~~----~~--~ 75 (322)
T PTZ00082 7 RKKISLIGSGNIGGVMAYLIQL-KNL-ADVVLFDIVPNIPAGKALDIMHANVMAGS-NCKV--IGTNSYDD----IA--G 75 (322)
T ss_pred CCCEEEECCCHHHHHHHHHHHC-CCC-CEEEEEECCCCCCHHHHHHHHCCCCCCCC-CCEE--EECCCHHH----HC--C
T ss_conf 9829998969899999999963-899-77999978898008899987663644688-8579--83799999----77--9
Q ss_pred CCEEEECCCC
Q ss_conf 7299973761
Q gi|254780742|r 82 SQIIINVGSS 91 (419)
Q Consensus 82 ~dvVin~~~p 91 (419)
+|+||.++|.
T Consensus 76 aDiVVitAG~ 85 (322)
T PTZ00082 76 SDVVIVTAGL 85 (322)
T ss_pred CCEEEECCCC
T ss_conf 9999989888
No 351
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=97.47 E-value=0.0018 Score=42.13 Aligned_cols=39 Identities=23% Similarity=0.441 Sum_probs=30.6
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH
Q ss_conf 19998498779999999996089872599963999999999
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKI 44 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~ 44 (419)
||||+|+|++|..++.+|+..+ ..+|+|.|.|.=....+
T Consensus 1 kvlvvG~GglG~e~~k~la~~G--vg~i~ivD~d~i~~sNL 39 (291)
T cd01488 1 KILVIGAGGLGCELLKNLALSG--FRNIHVIDMDTIDVSNL 39 (291)
T ss_pred CEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCEECCCCC
T ss_conf 9899928888999999999848--98599973993441356
No 352
>KOG1209 consensus
Probab=97.46 E-value=0.00094 Score=44.10 Aligned_cols=85 Identities=21% Similarity=0.266 Sum_probs=63.5
Q ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 731999849--877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGA--GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~Ga--G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
.|+|||.|| |++|-..+..++++. .++.-..|..+....++.. .++...++|+.+++++.+....
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G---~~V~AtaR~~e~M~~L~~~----------~gl~~~kLDV~~~~~V~~v~~e 73 (289)
T KOG1209 7 PKKVLITGCSSGGIGYALAKEFARNG---YLVYATARRLEPMAQLAIQ----------FGLKPYKLDVSKPEEVVTVSGE 73 (289)
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHCC---EEEEEECCCCCHHHHHHHH----------HCCEEEEECCCCHHHHHHHHHH
T ss_conf 97599960577653499999998678---1999970224607667886----------0970587056872778998888
Q ss_pred C------CCCEEEECCCCCCCHHHHH
Q ss_conf 3------9729997376100327899
Q gi|254780742|r 80 T------NSQIIINVGSSFLNMSVLR 99 (419)
Q Consensus 80 ~------~~dvVin~~~p~~~~~v~~ 99 (419)
. +.|+++|-+|..-..+.++
T Consensus 74 vr~~~~Gkld~L~NNAG~~C~~Pa~d 99 (289)
T KOG1209 74 VRANPDGKLDLLYNNAGQSCTFPALD 99 (289)
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 86189982688871799876552346
No 353
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=97.45 E-value=0.0033 Score=40.41 Aligned_cols=39 Identities=8% Similarity=0.077 Sum_probs=20.7
Q ss_pred HHHHHHHHCCCCCCCC----CCCHHHCCHHHHHHHHHHCCCEEEE
Q ss_conf 9999999879987786----2077885948999999967980999
Q gi|254780742|r 361 VATAILIAQGIWDIGK----MVNIEELPPKPFLGTLQRMGLATSL 401 (419)
Q Consensus 361 a~aa~lil~g~i~~~G----V~~Pe~~~~~~fl~~L~~~Gi~~~v 401 (419)
..+++++.+|++.-.- +++.|.+ ..-++.|++....-+|
T Consensus 300 ~~a~~li~~gk~~~~plIt~~~~le~~--~eA~~~l~~~~~~GKv 342 (347)
T PRK10309 300 ETASRLLTERKLSLEPLIAHRGSFESF--AQAVRDLAGNPMPGKV 342 (347)
T ss_pred HHHHHHHHCCCCCCCCEEEEEEEHHHH--HHHHHHHHCCCCCEEE
T ss_conf 999999983989987445449849999--9999999819991899
No 354
>KOG1478 consensus
Probab=97.44 E-value=0.001 Score=43.85 Aligned_cols=78 Identities=19% Similarity=0.275 Sum_probs=61.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCC--CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 9731999849-87799999999960898--72599963999999999987343024555557308994378989999999
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDI--LGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELI 77 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~--~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~ 77 (419)
|+|.+||-|+ .+.|-.++..|.+..|. -..++|+.|+.+|++++++.+..-.+.. .-+++.+++|++|-.++-+..
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~-~i~~~yvlvD~sNm~Sv~~A~ 80 (341)
T KOG1478 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKS-TIEVTYVLVDVSNMQSVFRAS 80 (341)
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCC-EEEEEEEEEEHHHHHHHHHHH
T ss_conf 7238999448886439999999751577616999997177267999999999748876-137999998506589999999
Q ss_pred HH
Q ss_conf 75
Q gi|254780742|r 78 KK 79 (419)
Q Consensus 78 ~~ 79 (419)
++
T Consensus 81 ~d 82 (341)
T KOG1478 81 KD 82 (341)
T ss_pred HH
T ss_conf 99
No 355
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=97.43 E-value=0.0045 Score=39.49 Aligned_cols=93 Identities=14% Similarity=0.212 Sum_probs=60.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
++|+|.|+|++|..++++...-. -+++.-+|+.+|++ ++++|.. ...+|.+|++.+.++-+ ..
T Consensus 168 ~~V~I~G~GGlGh~avQ~Aka~g---a~Via~~~~~~K~e-~a~~lGA-----------d~~i~~~~~~~~~~~~~--~~ 230 (339)
T COG1064 168 KWVAVVGAGGLGHMAVQYAKAMG---AEVIAITRSEEKLE-LAKKLGA-----------DHVINSSDSDALEAVKE--IA 230 (339)
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCHHHHH-HHHHHCC-----------CEEEECCCCHHHHHHHH--HC
T ss_conf 89999877489999999999869---96999957877999-9998488-----------28997678116677673--47
Q ss_pred CEEEECCCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf 2999737610032789999862886896036
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~ 113 (419)
|++|++++ .......-.++..+-.++-+..
T Consensus 231 d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~ 260 (339)
T COG1064 231 DAIIDTVG-PATLEPSLKALRRGGTLVLVGL 260 (339)
T ss_pred CEEEECCC-HHHHHHHHHHHHCCCEEEEECC
T ss_conf 39999877-4559999998642978999788
No 356
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.43 E-value=0.0026 Score=41.14 Aligned_cols=81 Identities=12% Similarity=0.195 Sum_probs=54.1
Q ss_pred CEEEEECC-CH--HHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 31999849-87--7999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 3 KNVLIIGA-GG--VAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 3 k~ilv~Ga-G~--vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|.+||-|+ ++ .|..+++.+++..- ++++..|+. .+++.++.+.+... .+ .+.++|+.|++++.+++.+
T Consensus 9 K~alVTGaa~g~Gig~aia~~~~~~Ga---~V~i~~~~~-~~~~~~~~l~~~~g----~~-~~~~~Dvt~~~~v~~~~~~ 79 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGA---ELWFTYQSE-VLEKRVKPLAEEIG----CN-FVSELDVTNPKSISNLFDD 79 (260)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCC---EEEEECCCH-HHHHHHHHHHHHCC----CC-EEEECCCCCHHHHHHHHHH
T ss_conf 989998999966899999999998799---999966867-99999999998438----37-6986579999999999999
Q ss_pred C-----CCCEEEECCCCC
Q ss_conf 3-----972999737610
Q gi|254780742|r 80 T-----NSQIIINVGSSF 92 (419)
Q Consensus 80 ~-----~~dvVin~~~p~ 92 (419)
. +.|++||.++..
T Consensus 80 ~~~~~G~iDiLVnnag~~ 97 (260)
T PRK06603 80 IKEKWGSFDFLLHGMAFA 97 (260)
T ss_pred HHHHHCCCCEEEECCCCC
T ss_conf 999869977899644237
No 357
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0015 Score=42.65 Aligned_cols=74 Identities=16% Similarity=0.185 Sum_probs=54.4
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|.+||.|+ +++|+.+++.|+++.- +++..+|+..+ . -.-+...+|+.|.+++.++++..
T Consensus 3 ~K~alITGas~GIG~aia~~la~~G~---~Vv~~~r~~~~------~----------~~~~~~~~D~~d~~~~~~~~~~~ 63 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH---QVIGIARSAID------D----------FPGELFACDLADIEQTAATLAQI 63 (234)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCC------C----------CCCEEEEEECCCHHHHHHHHHHH
T ss_conf 19899937788899999999998799---99996347544------7----------89769999579999999999999
Q ss_pred ----CCCEEEECCCCCCC
Q ss_conf ----97299973761003
Q gi|254780742|r 81 ----NSQIIINVGSSFLN 94 (419)
Q Consensus 81 ----~~dvVin~~~p~~~ 94 (419)
+.|++||.+|....
T Consensus 64 ~~~~~id~LVnnAG~~~~ 81 (234)
T PRK07577 64 NEIHPVDAIVNNVGIALP 81 (234)
T ss_pred HHHCCCCEEEECCCCCCC
T ss_conf 976999899989988999
No 358
>TIGR01915 npdG NADPH-dependent F420 reductase; InterPro: IPR010185 Members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase..
Probab=97.42 E-value=0.0021 Score=41.78 Aligned_cols=151 Identities=14% Similarity=0.093 Sum_probs=85.6
Q ss_pred EEEEECC-CHHHHHHHHHHHHCC----CCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 1999849-877999999999608----98725999639999999999873430245555573089943789899999997
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNN----DILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~----~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
+|-|+|. |-.|.-.+..||.+. ....+|+|.+|+.||+++-|+.........--++ ++-..=..|.+.-+
T Consensus 2 kIAvLGGTGdqG~GLALRlA~~glmPeG~~~~iIIGSR~~EkA~EaA~ka~e~l~~~G~d~-~i~~~G~~N~~AA~---- 76 (233)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGLMPEGVDNEIIIGSRDKEKAEEAAAKALEELGDQGVDR-DIKVEGAENEEAAK---- 76 (233)
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCC-CCEEECCCCHHHHH----
T ss_conf 6788448884025699999870778787775557704884569999999999997089513-62575488778872----
Q ss_pred HCCCCEEEECCCCCCCHHHH---HHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEC--CCHHH
Q ss_conf 53972999737610032789---99986288689603664200001442000035775108888518869953--75011
Q gi|254780742|r 79 KTNSQIIINVGSSFLNMSVL---RACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILG--AGFDP 153 (419)
Q Consensus 79 ~~~~dvVin~~~p~~~~~v~---~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~--~G~~P 153 (419)
.+||||=++|..++..++ +.-+++++=.||.+- ++....+-++++-. .-.+--|.+.=..++++ .=+..
T Consensus 77 --~aDVVil~vP~~~~~~~l~~~~~~L~~dK~Vis~~V---Pl~~~Ig~~~~~y~-~P~eGSaA~~~a~~lpeqg~~Vva 150 (233)
T TIGR01915 77 --RADVVILAVPFDHVLKTLESIKDELEADKIVISPVV---PLASAIGGKGLRYL-PPEEGSAAELVAKLLPEQGSKVVA 150 (233)
T ss_pred --HCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCC---CCCHHHCCCCCCCC-CCCCCHHHHHHHHHCCCCCCEEHH
T ss_conf --389789984222247899999998518928996478---75000024430026-873102899999853326750102
Q ss_pred HHHHHHHHHHHH
Q ss_conf 148899999999
Q gi|254780742|r 154 GVVNAFARLAQD 165 (419)
Q Consensus 154 Gl~~lla~~~~~ 165 (419)
.+-|+-|..+.+
T Consensus 151 AFhN~~A~~L~D 162 (233)
T TIGR01915 151 AFHNISAAKLKD 162 (233)
T ss_pred HHCCCCHHHCCC
T ss_conf 121324454044
No 359
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.40 E-value=0.00039 Score=46.68 Aligned_cols=45 Identities=22% Similarity=0.271 Sum_probs=37.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 319998498779999999996089872599963999999999987343
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYK 50 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~ 50 (419)
|+|-|+|||.||+.+|..++.+. .++++.|++++.+++..+.+.+
T Consensus 6 k~VaViGAG~MG~gIA~~~a~~G---~~V~l~D~~~~~l~~~~~~i~~ 50 (310)
T PRK06130 6 QNLAIIGAGAMGSGIAALFASKG---LDVVLIDPMPGALERAAQVIER 50 (310)
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHHHHH
T ss_conf 88989787799999999998589---9889997999999999999999
No 360
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.38 E-value=0.001 Score=43.81 Aligned_cols=96 Identities=10% Similarity=0.207 Sum_probs=69.3
Q ss_pred EEEEE-CCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 19998-49877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLII-GAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~-GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+|||. |||.+||.++..|.+.. .+++|.|.-..--+....+. ..+..+.|+.|.+.|.+.+.++++
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G---~~vvV~DNL~~g~~~~v~~~----------~~~f~~gDi~D~~~L~~vf~~~~i 68 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTG---HEVVVLDNLSNGHKIALLKL----------QFKFYEGDLLDRALLTAVFEENKI 68 (329)
T ss_pred EEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCCCHHHHHHC----------CCCEEEECCCCHHHHHHHHHHCCC
T ss_conf 29996586546899999999789---84899956887888886020----------485688334319999999986499
Q ss_pred CEEEECCCCC------------CCH------HHHHHHHHCCCCEEEEC
Q ss_conf 2999737610------------032------78999986288689603
Q gi|254780742|r 83 QIIINVGSSF------------LNM------SVLRACIDSNVAYIDTA 112 (419)
Q Consensus 83 dvVin~~~p~------------~~~------~v~~a~i~~g~hyvD~s 112 (419)
|.||..++.. |+. .++++|.++|+.-+--|
T Consensus 69 daViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFS 116 (329)
T COG1087 69 DAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFS 116 (329)
T ss_pred CEEEECCCCCCCCHHHHCHHHHHHHCHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 889987300432344418788886030869999999998299769992
No 361
>PRK07680 late competence protein ComER; Validated
Probab=97.38 E-value=0.0019 Score=41.98 Aligned_cols=92 Identities=17% Similarity=0.262 Sum_probs=63.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCC-CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 19998498779999999996089-87259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNND-ILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~-~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+|.++|||.||+++++-|.+... ...++++.+|+.+++..+.+... .+.+ ..|.+ ++++ ++
T Consensus 2 kI~fIG~GnMg~Aii~gl~~~~~~~~~~i~i~~r~~~~~~~l~~~~~---------~i~~----~~~~~---~~~~--~~ 63 (273)
T PRK07680 2 NIGFIGTGNMGTILIEAFLESRAVKPSCLTITNRTPAKAYHIKEKYP---------SIHV----AKTIE---EVIE--QS 63 (273)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCC---------CEEE----ECCHH---HHHH--CC
T ss_conf 89998769999999999997799894569998899899999998769---------9088----68889---9984--09
Q ss_pred CEEEECCCCCCCHHHHHHH---HHCCCCEEEECC
Q ss_conf 2999737610032789999---862886896036
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRAC---IDSNVAYIDTAI 113 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~---i~~g~hyvD~s~ 113 (419)
|+|+-|+-|..-..|++-. +..+...|.+..
T Consensus 64 dvIiLaVKPq~~~~vl~~i~~~~~~~~~iISi~A 97 (273)
T PRK07680 64 ELIFICVKPLDIYPLLKKLAPHFSDEKCLVSITS 97 (273)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 9899964888899999998863478848999558
No 362
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=97.38 E-value=0.013 Score=36.40 Aligned_cols=136 Identities=10% Similarity=0.076 Sum_probs=78.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCH-HHHHHHHHHCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898-99999997539
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNI-KAVVELIKKTN 81 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~-~~l~~~~~~~~ 81 (419)
.+|+|+|+|.+|-.++..+... .. .++++.|++.+|++ +++++... ..++..+. +...++-.+.+
T Consensus 122 ~~V~V~G~G~iGl~~~~~a~~~-Ga-~~Vi~~d~~~~rl~-~a~~~Ga~-----------~~i~~~~~~~~~~~~~~g~g 187 (280)
T TIGR03366 122 RRVLVVGAGMLGLTAAAAAAAA-GA-ARVVAADPSPDRRE-LALSFGAT-----------ALAEPEVLAERQGGLQNGRG 187 (280)
T ss_pred CEEEEEECCHHHHHHHHHHHHC-CC-CEEEEEECCHHHHH-HHHHCCCC-----------EEECCCCHHHHHHHHHCCCC
T ss_conf 9899990786899999999984-99-87999919989999-99973998-----------98377577999999727888
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHH
Q ss_conf 72999737610032789999862886896036642000014420000357751088885188699537501114889999
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAFAR 161 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~lla~ 161 (419)
.|+||.++|-.....-+-.++..|-.++-+....+.. +.++ .. ...-.+.++++-..+..|--..-+..
T Consensus 188 ~D~vie~~G~~~~~~~a~~~l~~gG~iv~vG~~~~~~----~~~~------~~-~~l~~ke~~i~Gs~~~~~~~~~~ai~ 256 (280)
T TIGR03366 188 VDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGG----PVAL------DP-EQVVRRWLTIRGVHNYEPRHLDQAVR 256 (280)
T ss_pred CCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCC----CCEE------CH-HHHHHCCEEEEEEECCCHHHHHHHHH
T ss_conf 7099987898899999999860498999980468998----4147------89-99986987999960689899999999
Q ss_pred HH
Q ss_conf 99
Q gi|254780742|r 162 LA 163 (419)
Q Consensus 162 ~~ 163 (419)
.+
T Consensus 257 ll 258 (280)
T TIGR03366 257 FL 258 (280)
T ss_pred HH
T ss_conf 99
No 363
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.36 E-value=0.0045 Score=39.48 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=61.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCC----CCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 7319998498779999999996089872599963999999999987343024----555557308994378989999999
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKS----LKIDGKLAIHQVDALNIKAVVELI 77 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~D~~d~~~l~~~~ 77 (419)
+.||.|+|+|..|++++..|+++.+ .+.-.|+.+..+.+.+...+... ...++++.. ..++.+.+
T Consensus 6 ~~KI~ViGaGawGTALA~~la~n~~----~v~w~r~~~~~~~In~~~~N~kyL~~~i~Lp~~i~~-------t~dl~~a~ 74 (340)
T PRK12439 6 EPKVVVLGGGSWGTTVASICARRGP----TLQWVRSEETAKDINDNHRNSRYLGNDVVLSDTLRA-------TTDFTEAA 74 (340)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC----EEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCEEE-------ECCHHHHH
T ss_conf 9928998969999999999995899----899968999999999828887689987558987289-------78999998
Q ss_pred HHCCCCEEEECCCCCCCHHHHHH---HHHCCCCEEEEC
Q ss_conf 75397299973761003278999---986288689603
Q gi|254780742|r 78 KKTNSQIIINVGSSFLNMSVLRA---CIDSNVAYIDTA 112 (419)
Q Consensus 78 ~~~~~dvVin~~~p~~~~~v~~a---~i~~g~hyvD~s 112 (419)
+ .+|+||-++|..+-..+++. .+...+.+|..+
T Consensus 75 ~--~adiii~avPS~~~r~~~~~l~~~l~~~~~iv~~s 110 (340)
T PRK12439 75 N--CADVVVMGVPSHGFRGVLTELAKELRPWVPVVSLV 110 (340)
T ss_pred H--CCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 2--69989993680899999999986557887599732
No 364
>COG0476 ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism]
Probab=97.36 E-value=0.0027 Score=40.96 Aligned_cols=104 Identities=19% Similarity=0.337 Sum_probs=68.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-------------------HHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 7319998498779999999996089872599963999-------------------999999987343024555557308
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-------------------QKCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
..+|+++|+|+.|+.++.+|+... + .++++.|.+. .|++..++.+...++.. .+..
T Consensus 30 ~s~vlvvG~GglG~~~~~~la~aG-v-g~l~i~D~d~v~~snL~rq~~~~~~dig~~Ka~~a~~~l~~ln~~v---~v~~ 104 (254)
T COG0476 30 DSRVLVVGAGGLGSPAAKYLALAG-V-GKLTIVDFDTVELSNLQRQFLFTEADVGKPKAEVAAKALRKLNPLV---EVVA 104 (254)
T ss_pred HCEEEEECCCCCCCHHHHHHHHCC-C-CEEEEEECCEEEECCCCCEEECCHHHCCCCHHHHHHHHHHHHCCCC---EEEE
T ss_conf 482899777633519999999826-9-8599985885770015650303341168888999999999978994---8998
Q ss_pred EEECCCCHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECC
Q ss_conf 994378989999999753972999737610-032789999862886896036
Q gi|254780742|r 63 HQVDALNIKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 63 ~~~D~~d~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~ 113 (419)
.... -+.+....++++ .|+|+++.--| ..+.+-++|..+++++++.+-
T Consensus 105 ~~~~-l~~~~~~~~~~~--~d~v~d~~dn~~~r~~iN~~~~~~~~pli~~~~ 153 (254)
T COG0476 105 YLER-LDEENAEELIAQ--FDVVLDCTDNFETRYLINDACVKLGIPLVHGGA 153 (254)
T ss_pred EECC-CCHHHHHHHHHC--CCEEEECCCCHHHHHHHHHHHHHHCCCEEECCC
T ss_conf 5233-667789998715--889997335177899999999984998896312
No 365
>PRK06223 malate dehydrogenase; Reviewed
Probab=97.35 E-value=0.0012 Score=43.42 Aligned_cols=79 Identities=20% Similarity=0.126 Sum_probs=53.2
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
||.|+|||.||+.++..|+.+. ...++++-|+++++++..+..+....... +.-..... ..|.+ .++ ++|
T Consensus 2 KI~IiGaG~VG~~~a~~l~~~~-l~~el~L~Di~~~~a~g~a~Dl~~~~~~~--~~~~~i~~-~~d~~----~~~--daD 71 (312)
T PRK06223 2 KISIIGAGNVGATLAHLLALKE-LGKDVVLFDIPEGIPQGKALDIAESSAVD--GFDAKITG-TNDYA----DIA--GSD 71 (312)
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CCCEEEEECCCCCHHHHHHHHHHCCCCCC--CCCCEEEE-CCCHH----HHC--CCC
T ss_conf 7999996989999999998579-98748997699973367988876514336--88847983-78889----957--999
Q ss_pred EEEECCCCC
Q ss_conf 999737610
Q gi|254780742|r 84 IIINVGSSF 92 (419)
Q Consensus 84 vVin~~~p~ 92 (419)
+||.++|..
T Consensus 72 iVVitag~~ 80 (312)
T PRK06223 72 VVIITAGVP 80 (312)
T ss_pred EEEEECCCC
T ss_conf 999906778
No 366
>KOG2018 consensus
Probab=97.35 E-value=0.0019 Score=42.05 Aligned_cols=101 Identities=19% Similarity=0.288 Sum_probs=67.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH-------------------HHHHHHHCCCCCCCCCEEEE
Q ss_conf 19998498779999999996089872599963999999999-------------------98734302455555730899
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKI-------------------IDSIYKKKSLKIDGKLAIHQ 64 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~-------------------~~~l~~~~~~~~~~~~~~~~ 64 (419)
-|+|+|||+||+.++..|++.+ . .+|-+.|.+.-.+..+ .+.+.+. +..++
T Consensus 76 yVVVVG~GgVGSwv~nmL~RSG-~-qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~ski--------aPw~e 145 (430)
T KOG2018 76 YVVVVGAGGVGSWVANMLLRSG-V-QKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHFSKI--------APWCE 145 (430)
T ss_pred EEEEEECCCHHHHHHHHHHHHC-C-CEEEEECHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH--------CCCCE
T ss_conf 7999916852299999999826-8-638995310145756322352467653881689999999852--------86012
Q ss_pred ECCC----CHHHHHHHHHHCCCCEEEECCCCCC-CHHHHHHHHHCCCCEEEECCCC
Q ss_conf 4378----9899999997539729997376100-3278999986288689603664
Q gi|254780742|r 65 VDAL----NIKAVVELIKKTNSQIIINVGSSFL-NMSVLRACIDSNVAYIDTAIHE 115 (419)
Q Consensus 65 ~D~~----d~~~l~~~~~~~~~dvVin~~~p~~-~~~v~~a~i~~g~hyvD~s~~~ 115 (419)
+|+. ++++-.+++.+ ++|.|++|.--.. .-.++++|..+|...+..+|..
T Consensus 146 Idar~~l~~~~s~edll~g-nPdFvvDciDNidtKVdLL~y~~~~~l~Viss~Gaa 200 (430)
T KOG2018 146 IDARNMLWTSSSEEDLLSG-NPDFVVDCIDNIDTKVDLLEYCYNHGLKVISSTGAA 200 (430)
T ss_pred ECHHHHHCCCCCHHHHHCC-CCCEEEEHHHHHHHHHHHHHHHHHCCCCEEECCCCC
T ss_conf 0087763187752234227-998576712102125579999987698567336743
No 367
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase; InterPro: IPR006398 These sequences represent 2-hydroxy-3-oxopropionate reductase (1.1.1.60 from EC), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism , .; GO: 0008679 2-hydroxy-3-oxopropionate reductase activity, 0046487 glyoxylate metabolic process.
Probab=97.34 E-value=0.0013 Score=43.08 Aligned_cols=89 Identities=12% Similarity=0.208 Sum_probs=65.7
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
||-.||-|-||++++..|++.. .++++++++++++.+++..= +...+..++..+ .||
T Consensus 1 KvgfIGLGIMG~PMs~NL~kAG---yql~v~t~~~e~~d~l~aaG------------------a~~a~ta~~~~e--~~D 57 (291)
T TIGR01505 1 KVGFIGLGIMGKPMSKNLLKAG---YQLVVATLEQEVLDELLAAG------------------AESAETAKEVVE--DAD 57 (291)
T ss_pred CEEEEECCCCCCHHHHHHHHCC---CEEEEEECCCHHHHHHHHCC------------------CHHHHHHHHHHH--HCC
T ss_conf 9045635877865789997549---46888307704899998617------------------322899999997--489
Q ss_pred EEEECCCCC-------CCH-HHHHHHHHCCCCEEEECCCCC
Q ss_conf 999737610-------032-789999862886896036642
Q gi|254780742|r 84 IIINVGSSF-------LNM-SVLRACIDSNVAYIDTAIHES 116 (419)
Q Consensus 84 vVin~~~p~-------~~~-~v~~a~i~~g~hyvD~s~~~~ 116 (419)
|||.++|.. |++ -+++++ ..|+-.||+|--.|
T Consensus 58 vi~~MvP~sPqVeeva~GenGi~e~a-k~G~~lvDMSSI~P 97 (291)
T TIGR01505 58 VIVTMVPDSPQVEEVAFGENGILEAA-KKGKVLVDMSSIAP 97 (291)
T ss_pred EEEEECCCCCCEEEEEECCCCCCCCC-CCCCEEEECCCCCC
T ss_conf 79984387697015655687521256-88877887056782
No 368
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.33 E-value=0.00055 Score=45.67 Aligned_cols=45 Identities=20% Similarity=0.190 Sum_probs=36.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHH
Q ss_conf 731999849877999999999608987259996399999999998734
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIY 49 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~ 49 (419)
-|+|.|+|||.||+.+|..++.+. .++++.|++.+.+++..+.+.
T Consensus 3 i~~VaViGaG~MG~gIA~~~a~~G---~~V~l~D~~~~~l~~a~~~i~ 47 (288)
T PRK08293 3 IKKVTVAGAGVLGSQIAFQTAFKG---FDVTIYDISEEALDAAKRRLA 47 (288)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHHHH
T ss_conf 578999897889999999999579---928999898899999999999
No 369
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=97.31 E-value=0.0023 Score=41.43 Aligned_cols=95 Identities=15% Similarity=0.274 Sum_probs=47.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC-CHHHHHHHHHH
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378-98999999975
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDAL-NIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~-d~~~l~~~~~~ 79 (419)
+++|||+|. |++|+.....|.+..++ ++.=-|...+++..+. ..+|+.+.+-|+. +.+.+..-++
T Consensus 315 ~~~vlilgvngfig~hl~~~~l~~~~~--~v~g~d~~~~~i~~~~----------~~p~~~f~~gdi~~~~~wie~~ik- 381 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRDDNY--EVYGLDIGSDAISRFL----------GHPRFHFVEGDISIHSEWIEYHIK- 381 (660)
T ss_pred CEEEEEEECCCHHHHHHHHHHHCCCCE--EEEEEECCCCHHHHHH----------CCCCEEEEECCCHHHHHHHHHHHH-
T ss_conf 227999834413678999998503885--8998865753455753----------499548881561466899998875-
Q ss_pred CCCCEEEECCC---C----------C-----CCHHHHHHHHHCCCCEEE
Q ss_conf 39729997376---1----------0-----032789999862886896
Q gi|254780742|r 80 TNSQIIINVGS---S----------F-----LNMSVLRACIDSNVAYID 110 (419)
Q Consensus 80 ~~~dvVin~~~---p----------~-----~~~~v~~a~i~~g~hyvD 110 (419)
+||+|+-++. | | .+..|++.|.+.++..+=
T Consensus 382 -kcdvvlplvaiatp~~y~~~pl~vfeldfe~nl~ivr~c~ky~kriif 429 (660)
T PRK08125 382 -KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYRKRIIF 429 (660)
T ss_pred -HCCEEEEEHHHCCHHHHHCCCCEEEEECHHHCCHHHHHHHHHCCEEEE
T ss_conf -457673205534747763486047873267552899999974877896
No 370
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=97.31 E-value=0.0011 Score=43.61 Aligned_cols=88 Identities=15% Similarity=0.086 Sum_probs=56.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCC---CCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 973199984987799999999960898725999639999999999873430245---55557308994378989999999
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSL---KIDGKLAIHQVDALNIKAVVELI 77 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~D~~d~~~l~~~~ 77 (419)
|-|+|-|+|||-||+.+|...+.+. .++++-|.+++..+++.+.+.+.... ....... ....+.-..++.+.+
T Consensus 1 MIkkVAVIGAGvMGsGwAa~FA~aG---~~V~L~Dp~peA~~ki~~~l~~a~~al~~L~~~~l~-~~grL~~~~sL~eAV 76 (489)
T PRK07531 1 MIMKAACIGGGVIGGGWAARFLLNG---WDVAVFDPHPEAERIIGEVLANARRALPGLTDAPLP-PEGRLSFCASLAEAV 76 (489)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCEEECCCHHHHH
T ss_conf 9767999871886899999999579---969999488789999999999999987753203556-467768638899997
Q ss_pred HHCCCCEEEECCCCCCC
Q ss_conf 75397299973761003
Q gi|254780742|r 78 KKTNSQIIINVGSSFLN 94 (419)
Q Consensus 78 ~~~~~dvVin~~~p~~~ 94 (419)
+ ++|+|+-+++--..
T Consensus 77 ~--dADlVqEaVPE~Ld 91 (489)
T PRK07531 77 A--GADWIQESVPERLD 91 (489)
T ss_pred C--CCCEEEECCCCCHH
T ss_conf 4--79999987856699
No 371
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.28 E-value=0.0013 Score=43.22 Aligned_cols=96 Identities=15% Similarity=0.253 Sum_probs=61.1
Q ss_pred CCC--EEEEECC-CHHHHHHHHHHHHCCCCCCEEE-EEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 973--1999849-8779999999996089872599-96399999999998734302455555730899437898999999
Q gi|254780742|r 1 MKK--NVLIIGA-GGVAHVVAHKCAQNNDILGDIN-IASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVEL 76 (419)
Q Consensus 1 M~k--~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~-va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~ 76 (419)
|.+ ||-|+|| |.||+..++.|.++.-...++. +|+++ +..+. .. .....+.+..++-. +
T Consensus 1 M~~~~~VaIvGATG~VG~~li~lL~~~~~p~~~l~~laS~~-saGk~--------i~-~~~~~l~v~~~~~~---~---- 63 (336)
T PRK05671 1 MSQPLDIAVVGATGSVGEALVQVLEERDFPVGTLHLLASME-SAGHS--------VP-FAGKNLRVREVDSF---D---- 63 (336)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCC-CCCCE--------EE-ECCCEEEEEECCCC---C----
T ss_conf 99888799999864999999999863699802699998765-68987--------54-68967899978824---4----
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCC
Q ss_conf 975397299973761003278999986288689603664
Q gi|254780742|r 77 IKKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHE 115 (419)
Q Consensus 77 ~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~ 115 (419)
++ ++|+|+.++|+-.....+..+.++|+-.||.|...
T Consensus 64 ~~--~vDlvffa~~~~vs~~~a~~~~~aG~~VID~Ss~f 100 (336)
T PRK05671 64 FS--QVKLAFFAAGAAVSRSFAEKALAAGCSVIDLSGAL 100 (336)
T ss_pred CC--CCCEEEECCCHHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf 24--59889986881667998999997699799562013
No 372
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.27 E-value=0.0062 Score=38.56 Aligned_cols=164 Identities=14% Similarity=0.067 Sum_probs=92.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEE--------EECCCCHHHHHH
Q ss_conf 199984987799999999960898725999639999999999873430245555573089--------943789899999
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIH--------QVDALNIKAVVE 75 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~D~~d~~~l~~ 75 (419)
+|.|+|.|.||-+.+..|+.... +++..|.|.++.+.+..... +..++.++-. .+-. ...+.+
T Consensus 2 kI~ViGlGyVGl~~a~~lA~~G~---~V~g~D~d~~~i~~l~~g~~----p~~E~gl~~ll~~~~~~~~l~~--ttd~~~ 72 (411)
T TIGR03026 2 KIAVIGLGYVGLPLAALLADLGH---EVTGVDIDQEKVDKLNKGKS----PIYEPGLDELLAKALAAGRLRA--TTDYED 72 (411)
T ss_pred EEEEECCCHHHHHHHHHHHHCCC---CEEEEECCHHHHHHHHCCCC----CCCCCCHHHHHHHHHHCCCEEE--ECCHHH
T ss_conf 79998978779999999994899---48999899999999977989----9789898999999986399799--878899
Q ss_pred HHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHH
Q ss_conf 99753972999737610032789999862886896036642000014420000357751088885188699537501114
Q gi|254780742|r 76 LIKKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGV 155 (419)
Q Consensus 76 ~~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl 155 (419)
.++ ++|+++-|+|-..+. . .-.|+++.....+.+ .+..+.+..+|...=+-||-
T Consensus 73 ~i~--~~dii~I~V~TP~~~--------~--g~~d~s~l~~a~~~i--------------~~~l~~~~lvii~STV~pGT 126 (411)
T TIGR03026 73 AIR--DADVIIICVPTPLKE--------D--GSPDLSYVESAAETI--------------AKHLRKGATVVLESTVPPGT 126 (411)
T ss_pred HHH--HCCEEEEECCCCCCC--------C--CCCHHHHHHHHHHHH--------------HHHCCCCCEEEEECCCCCCE
T ss_conf 872--099999976898666--------8--872138999999999--------------97668999899957868681
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEE
Q ss_conf 889999999974366638976302478888666542568998862259829999
Q gi|254780742|r 156 VNAFARLAQDEYFDKITDIDIIDVNAGKHDKYFATNFDAEINLREFTGVVYSWQ 209 (419)
Q Consensus 156 ~~lla~~~~~~~~d~~~~i~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ 209 (419)
+.-+.....++..+.....+....+++..-... ..+..+.+|.+++-
T Consensus 127 t~~i~~~ile~~~~~~~g~df~v~~~PEfl~eG-------~a~~d~~~~~riV~ 173 (411)
T TIGR03026 127 TEEVVKPILERASGLKLGEDFYLAYNPEFLREG-------NAVHDLLNPDRIVG 173 (411)
T ss_pred EHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC-------CCCCCCCCCCEEEE
T ss_conf 048999988774046668854799683546874-------72234236985999
No 373
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating); InterPro: IPR004849 This family resembles a larger family of bacterial and eukaryotic 6-phosphogluconate dehydrogenases (Gnd) but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain Gnd, and in Aquifex aeolicus. .
Probab=97.27 E-value=0.0076 Score=37.94 Aligned_cols=108 Identities=15% Similarity=0.266 Sum_probs=75.6
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHH-H-------HHHHHCCCCCCCCCEEEEECCCC-----H
Q ss_conf 199984987799999999960898725999639999999999-8-------73430245555573089943789-----8
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKII-D-------SIYKKKSLKIDGKLAIHQVDALN-----I 70 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~-~-------~l~~~~~~~~~~~~~~~~~D~~d-----~ 70 (419)
.|-+||.|.||..+++.|..+.. ++++-|+|++.-++++ + ++.........||+-.+=|=..| .
T Consensus 3 tlglIGLGrMG~ni~~rl~~rgh---~~vgYd~~q~av~~~kG~d~~~gv~nl~E~~~~l~~Pr~vWvMVPhgnivdaVl 79 (341)
T TIGR00872 3 TLGLIGLGRMGANIAKRLADRGH---EVVGYDRDQAAVEELKGEDRAEGVANLKELLKRLSAPRVVWVMVPHGNIVDAVL 79 (341)
T ss_pred EEEEECCCHHHHHHHHHHHHCCC---EEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
T ss_conf 24431334678999999852794---699853887999997201134300124788841799958998628736799999
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCCHHH--HHHHHHCCCCEEEECCCCC
Q ss_conf 999999975397299973761003278--9999862886896036642
Q gi|254780742|r 71 KAVVELIKKTNSQIIINVGSSFLNMSV--LRACIDSNVAYIDTAIHES 116 (419)
Q Consensus 71 ~~l~~~~~~~~~dvVin~~~p~~~~~v--~~a~i~~g~hyvD~s~~~~ 116 (419)
+.|+-+++ +.|+||..=.-||...+ -+.--+.|+||+|..-.-.
T Consensus 80 ~~l~p~L~--kGD~vIdgGNsyYkds~Rry~~lke~gih~LD~GtSGG 125 (341)
T TIGR00872 80 RELAPLLE--KGDIVIDGGNSYYKDSLRRYKELKEKGIHYLDVGTSGG 125 (341)
T ss_pred HHHHHHHH--CCCEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCC
T ss_conf 97666764--08889827865123347888768871875653454577
No 374
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.26 E-value=0.0039 Score=39.91 Aligned_cols=87 Identities=14% Similarity=0.117 Sum_probs=55.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
-|+|+|+|.|..|..++++|.+.. .++++.|.++..+....+. .++... ..+.. +.+. +
T Consensus 12 Gk~V~V~GlG~sG~a~a~~L~~~G---~~v~~~D~~~~~~~~~~~~-----------~~~~~~--~~~~~---~~~~--~ 70 (487)
T PRK03369 12 GAPVLVAGAGVTGRAVLAALTRFG---ARPTVCDDDPDALRPHAER-----------GVATVS--SSDAV---QQIA--D 70 (487)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCC---CEEEEEECCCHHHHHHHHC-----------CCCEEC--CCCCH---HHHC--C
T ss_conf 898999915683899999999786---9799998982577999865-----------994863--76226---5646--7
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 7299973761003278999986288689
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
+|+||-.-|-..+.+.++++.+.|+..+
T Consensus 71 ~d~vV~SPGI~~~~p~l~~a~~~gi~i~ 98 (487)
T PRK03369 71 YALVVTSPGFPPTAPVLAAAAAAGVPIW 98 (487)
T ss_pred CCEEEECCCCCCCCHHHHHHHHCCCCEE
T ss_conf 7889989957998999999998899076
No 375
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=97.25 E-value=0.0022 Score=41.62 Aligned_cols=92 Identities=13% Similarity=0.182 Sum_probs=51.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCC-CCCCCCCEEEEEC-CCCHHHHHHHHH
Q ss_conf 97319998498779999999996089872599963999999999987343024-5555573089943-789899999997
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKS-LKIDGKLAIHQVD-ALNIKAVVELIK 78 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~D-~~d~~~l~~~~~ 78 (419)
|.-||+|+|||.||+.++..|++... ++++.+| .+..+++.+.=-.... ...+..+....+- ..+++.+ .
T Consensus 1 ~mmkI~IiGaGAvG~~~a~~L~~aG~---~V~lv~r-~~~~~~i~~~Gl~i~~~~~~~~~~~~~~~~~~~~~~~~----~ 72 (341)
T PRK08229 1 MMARICVLGAGSIGCYLGGRLAAAGA---DVTLIGR-ARIGDEIRAHGLRLTDYRGRDVRVPPDAIAFSTDPAAL----A 72 (341)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---CEEEEEC-HHHHHHHHHCCCEEECCCCCEEEECCCEEEECCCHHHC----C
T ss_conf 94779998967999999999985899---8799956-78999999679099638997689636615614886565----8
Q ss_pred HCCCCEEEECCCCCCCHHHHHHHH
Q ss_conf 539729997376100327899998
Q gi|254780742|r 79 KTNSQIIINVGSSFLNMSVLRACI 102 (419)
Q Consensus 79 ~~~~dvVin~~~p~~~~~v~~a~i 102 (419)
.+|+||-|+=.+....+++.+.
T Consensus 73 --~~D~viv~vKa~~~~~a~~~l~ 94 (341)
T PRK08229 73 --TADLVLVTVKSAATADAAAALA 94 (341)
T ss_pred --CCCEEEEEECCCCHHHHHHHHH
T ss_conf --9998999707578899999998
No 376
>PRK06395 phosphoribosylamine--glycine ligase; Provisional
Probab=97.25 E-value=0.0047 Score=39.40 Aligned_cols=95 Identities=14% Similarity=0.185 Sum_probs=70.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 97319998498779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|+.||||+|.|+=-.+++..|.+.+.. ..+..+-.|..-.+ .+ .....+|..|.+.+.+++++.
T Consensus 1 m~MkVLViGsGGREHAla~kl~~s~~~-~~~~~g~gn~g~~~-~~--------------~~~~~~~~~d~~~i~~~a~~~ 64 (435)
T PRK06395 1 MTMKVMLVGSGGREDAIARAIKRSGAI-LFSVIGHENPSIKK-LS--------------KKYLFYDEKDYDLIEDFALKN 64 (435)
T ss_pred CCCEEEEECCCHHHHHHHHHHHCCCCC-EEEEECCCCHHHHH-HC--------------CCCCCCCCCCHHHHHHHHHHC
T ss_conf 987799988788999999998559884-49998999678776-23--------------234656856999999999984
Q ss_pred CCCEEEECCCCC--CCHHHHHHHHHCCCCEEEECC
Q ss_conf 972999737610--032789999862886896036
Q gi|254780742|r 81 NSQIIINVGSSF--LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 81 ~~dvVin~~~p~--~~~~v~~a~i~~g~hyvD~s~ 113 (419)
+.|+|| +||- +...++....++|...+--+-
T Consensus 65 ~idLvv--vGPE~pL~~Gi~D~l~~~gi~vFGP~k 97 (435)
T PRK06395 65 NVDIVF--VGPDPVLATPLVNNLLKRGIKVASPTM 97 (435)
T ss_pred CCCEEE--ECCCHHHHCCHHHHHHHCCCCEECCHH
T ss_conf 999999--897678866145599768994668428
No 377
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB; InterPro: IPR012730 This entry describes the molybdopterin biosynthesis protein MoeB in Escherichia coli and related species. MoeB and MoaD are involved in molybdenum cofactor biosynthesis, an evolutionarily conserved pathway. The MoeB enzyme covalently modifies the molybdopterin synthase MoaD by sulphurylation. The crystal structure of the complex between the E. coli MoeB and MoaD proteins reveals a MoeB(2)-MoaD(2) heterotetramer in which the MoeB subunits form a mainly hydrophobic dimer . MoeB is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (IPR000594 from INTERPRO). ; GO: 0006777 Mo-molybdopterin cofactor biosynthetic process.
Probab=97.23 E-value=0.0037 Score=40.06 Aligned_cols=107 Identities=19% Similarity=0.397 Sum_probs=71.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCC--------------CCCCCCCEEEEECC-
Q ss_conf 319998498779999999996089872599963999999999987343024--------------55555730899437-
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKS--------------LKIDGKLAIHQVDA- 67 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~~~D~- 67 (419)
.+||++|+||.|=++.+||+..+ + .++++.|.|.-.+..+.+.+--..+ ....|.+++-.++.
T Consensus 25 s~vLivG~GGLGCAa~QYLa~AG-v-G~l~L~DfD~V~lSNLQRQvLH~da~~g~pKV~SA~~~L~~~NPhi~i~~in~~ 102 (240)
T TIGR02355 25 SKVLIVGLGGLGCAASQYLAAAG-V-GRLTLVDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALEEINPHIKINTINAK 102 (240)
T ss_pred CCEEEEECCHHHHHHHHHHHHCC-C-CEEEEEECCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHH
T ss_conf 56777836703456788886436-6-327886337100112133441032557861268999999863991678057642
Q ss_pred CCHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECC
Q ss_conf 8989999999753972999737610-032789999862886896036
Q gi|254780742|r 68 LNIKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 68 ~d~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~ 113 (419)
.|.+++.+++..| |+|++|.--- ...++=+.|...+++.|.-+.
T Consensus 103 ld~~~l~~li~~~--~~V~DctDNV~vRnQLn~~Cf~~K~PLvSgaA 147 (240)
T TIGR02355 103 LDDEELAALIAKH--DVVVDCTDNVEVRNQLNRQCFAAKVPLVSGAA 147 (240)
T ss_pred CCHHHHHHHHHHC--CEEEECCCCHHHHHHHHHHHHHCCCCCEEHHH
T ss_conf 2688999886204--17885377657888875777623898000122
No 378
>PRK05472 redox-sensing transcriptional repressor Rex; Provisional
Probab=97.22 E-value=0.003 Score=40.71 Aligned_cols=90 Identities=17% Similarity=0.201 Sum_probs=68.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
.+++++|+|..|++.+.|---...-+.-+.+=|.|+++.-+ ++.-+-+.+.+.|.+.++.++.
T Consensus 85 ~~v~lvGaGnLG~AL~~y~gf~~~gf~Iva~FD~dp~kiG~-----------------~i~gi~V~~i~~L~~~i~~~~i 147 (211)
T PRK05472 85 TNVALVGAGNLGRALLNYNGFKKRGFKIVAAFDVDPEKVGT-----------------KIGGIPVYHIDELEEVIKENDI 147 (211)
T ss_pred CEEEEECCCHHHHHHHHCCCHHHCCCEEEEEECCCHHHCCC-----------------EECCEEEECHHHHHHHHHHHCC
T ss_conf 50899888779999984876231897899997489788598-----------------8388387349999999998199
Q ss_pred CEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 299973761003278999986288689
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
++.|-|+|....-.++...+++|+..+
T Consensus 148 ~iaIiaVP~~~AQ~vad~Lv~aGIk~I 174 (211)
T PRK05472 148 EIAILTVPAEAAQEVADRLVEAGIKGI 174 (211)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCEEE
T ss_conf 389995576889999999998198399
No 379
>pfam00056 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain. L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold.
Probab=97.20 E-value=0.0013 Score=43.21 Aligned_cols=79 Identities=14% Similarity=0.232 Sum_probs=54.3
Q ss_pred EEEEECCC-HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 19998498-77999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGAG-GVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~GaG-~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
||.|+||| .||+.+++.|+.+. ...++++-|+++++++..+..+....... ....... ..+.+ -++ ++
T Consensus 2 KV~IIGagg~VG~~~A~~l~~~~-l~~elvL~D~~~~~a~g~alDl~~~~~~~--~~~~~~~--~~~~~----~~~--da 70 (142)
T pfam00056 2 KVAVVGAGGGVGSSLAFALALQG-LADELVLVDINKDKAEGVAMDLSHGSTFL--SVPGIVG--GDDYE----ALK--DA 70 (142)
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-CCCEEEEECCCCCCCHHHHHHHHCCCCCC--CCCEEEC--CCCHH----HHC--CC
T ss_conf 89998987789999999997479-66347885057764117999986144347--8876974--88388----837--89
Q ss_pred CEEEECCCCCC
Q ss_conf 29997376100
Q gi|254780742|r 83 QIIINVGSSFL 93 (419)
Q Consensus 83 dvVin~~~p~~ 93 (419)
|+||.++|...
T Consensus 71 DiVVitaG~~~ 81 (142)
T pfam00056 71 DVVVITAGVPR 81 (142)
T ss_pred CEEEEECCCCC
T ss_conf 99998157778
No 380
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=97.18 E-value=0.0057 Score=38.82 Aligned_cols=75 Identities=12% Similarity=0.141 Sum_probs=40.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECC--CCHHHHHHHHHHCC
Q ss_conf 1999849877999999999608987259996399999999998734302455555730899437--89899999997539
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDA--LNIKAVVELIKKTN 81 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~--~d~~~l~~~~~~~~ 81 (419)
+|+|+|+|-+|-.++. +++.... .++++.|++.+|++...+..... ...... ...+.+.++-.+.+
T Consensus 171 ~V~V~GaGpIGLla~~-~a~~~Ga-~~Viv~d~~~~Rl~~A~~~~g~~----------~~~~~~~~~~~~~~~~~t~g~g 238 (350)
T COG1063 171 TVVVVGAGPIGLLAIA-LAKLLGA-SVVIVVDRSPERLELAKEAGGAD----------VVVNPSEDDAGAEILELTGGRG 238 (350)
T ss_pred EEEEECCCHHHHHHHH-HHHHCCC-CEEEEECCCHHHHHHHHHHCCCC----------EEECCCCHHHHHHHHHHCCCCC
T ss_conf 8999888899999999-9987698-27999799989999999877971----------8724630147889998608987
Q ss_pred CCEEEECCC
Q ss_conf 729997376
Q gi|254780742|r 82 SQIIINVGS 90 (419)
Q Consensus 82 ~dvVin~~~ 90 (419)
+|+|+-|+|
T Consensus 239 ~D~vie~~G 247 (350)
T COG1063 239 ADVVIEAVG 247 (350)
T ss_pred CCEEEECCC
T ss_conf 999999989
No 381
>PRK13789 phosphoribosylamine--glycine ligase; Provisional
Probab=97.18 E-value=0.0067 Score=38.32 Aligned_cols=98 Identities=16% Similarity=0.200 Sum_probs=70.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 97319998498779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|+.||||+|.|+=-.+++..|.+.+.. .++.++==|..-.+ ...+....+|+.|.+++.++++++
T Consensus 3 ~~MkVLviGsGGREHAia~kl~~S~~v-~~v~~aPGN~G~~~--------------~~~~~~~~i~~~d~~~i~~fa~~~ 67 (426)
T PRK13789 3 VKLKVLLIGSGGRESAIAFALRKSNLL-SELKVFPGNGGFPD--------------DELLPADSFSILDKSSVQSFLKSN 67 (426)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCC-CEEEEECCCCCCCC--------------CCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 798899989888999999999619898-87999889761123--------------454544433866999999999984
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf 972999737610032789999862886896036
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~ 113 (419)
+.|+||-.=...+...++.+..++|...+--+-
T Consensus 68 ~idLvvvGPE~PL~~Gi~D~l~~~gi~vfGP~k 100 (426)
T PRK13789 68 PFDLIVVGPEDPLVAGFADWAAELGIPCFGPDS 100 (426)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCEEECCCH
T ss_conf 999999896688863179998416991689598
No 382
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=97.17 E-value=0.0016 Score=42.59 Aligned_cols=78 Identities=15% Similarity=0.181 Sum_probs=54.7
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE
Q ss_conf 99984987799999999960898725999639999999999873430245555573089943789899999997539729
Q gi|254780742|r 5 VLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQI 84 (419)
Q Consensus 5 ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dv 84 (419)
|.|+|+|.||+.+++.|+.+. ...++++-|++.++++..+..|........ .... +-..+.+. ++ ++|+
T Consensus 1 V~IIGaG~VG~~~A~~l~~~~-l~~el~L~Di~~~~a~g~a~Dl~~~~~~~~--~~~~--~~~~~~~~----~~--daDv 69 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAKG-LASELVLVDVNEEKAKGDALDLSHASAFLA--TGTI--VRGGDYAD----AA--DADI 69 (300)
T ss_pred CEEECCCHHHHHHHHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHCCCCCC--CCEE--ECCCCHHH----HC--CCCE
T ss_conf 989896889999999998679-988799981899811568888772563468--8539--82798899----67--9999
Q ss_pred EEECCCCCC
Q ss_conf 997376100
Q gi|254780742|r 85 IINVGSSFL 93 (419)
Q Consensus 85 Vin~~~p~~ 93 (419)
||.++|...
T Consensus 70 vVitaG~~r 78 (300)
T cd00300 70 VVITAGAPR 78 (300)
T ss_pred EEECCCCCC
T ss_conf 998789899
No 383
>pfam03721 UDPG_MGDP_dh_N UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain. The UDP-glucose/GDP-mannose dehydrogenaseses are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate.
Probab=97.17 E-value=0.0065 Score=38.44 Aligned_cols=163 Identities=13% Similarity=0.083 Sum_probs=89.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEE-------EEECCCCHHHHHHH
Q ss_conf 19998498779999999996089872599963999999999987343024555557308-------99437898999999
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAI-------HQVDALNIKAVVEL 76 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~-------~~~D~~d~~~l~~~ 76 (419)
||.|+|.|.||-+.+..|++... +++..|.|.++.+.+.+.-.. ..++.++- -.+-. ..+..+.
T Consensus 2 kI~ViGlGyVGl~~a~~la~~G~---~V~g~D~d~~~v~~ln~g~~p----~~E~~l~~~l~~~~~~~~~~--~~~~~~~ 72 (185)
T pfam03721 2 RIAVIGLGYVGLPTAVCLAEIGH---DVVGVDINQSKIDKLNNGKIP----IYEPGLEELLKANVSGRLRF--TTDVAEA 72 (185)
T ss_pred EEEEECCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHCCCCC----CCCCCHHHHHHHHHCCCEEE--ECCHHHH
T ss_conf 79998978748999999994899---399997998999998626897----46758899998734089699--8787998
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHH
Q ss_conf 97539729997376100327899998628868960366420000144200003577510888851886995375011148
Q gi|254780742|r 77 IKKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVV 156 (419)
Q Consensus 77 ~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~ 156 (419)
++ ++|+++-|+|-..+ +.+ -.|++......+ .+ ....+.+..++...=+-||-+
T Consensus 73 i~--~~d~i~I~VpTP~~--------~~~--~~d~s~l~~~~~-------------~i-~~~l~~~~liii~STVppGtt 126 (185)
T pfam03721 73 IK--EADVIFIAVPTPSK--------KGG--APDLTYVESAAR-------------TI-GPVLKKGKVVVVKSTVPPGTT 126 (185)
T ss_pred HH--HCCEEEEECCCCCC--------CCC--CCCCHHHHHHHH-------------HH-HHHCCCCCEEEEECCCCCCCH
T ss_conf 84--49899997368765--------576--766359999999-------------99-744679989999189998868
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEE
Q ss_conf 89999999974366638976302478888666542568998862259829999
Q gi|254780742|r 157 NAFARLAQDEYFDKITDIDIIDVNAGKHDKYFATNFDAEINLREFTGVVYSWQ 209 (419)
Q Consensus 157 ~lla~~~~~~~~d~~~~i~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ 209 (419)
.-+.....+.... ....+.+.++++..-... ..+..+.+|++++-
T Consensus 127 ~~~~~~l~~~~~~-~~~~d~~l~~~PErl~~G-------~a~~d~~~~~riv~ 171 (185)
T pfam03721 127 EEVVKPILEKRSG-KKAVDFNVASNPEFLREG-------NAIHDLLNPDRVVI 171 (185)
T ss_pred HHHHHHHHHHCCC-CCCCCEEEEECHHHCCCC-------CHHHHCCCCCEEEE
T ss_conf 9999999997266-778744898783323664-------22333169997999
No 384
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.16 E-value=0.0066 Score=38.37 Aligned_cols=91 Identities=14% Similarity=0.092 Sum_probs=60.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECC-HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 31999849877999999999608987259996399-99999999873430245555573089943789899999997539
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRT-LQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
+.+.|+|+|.+|+..++.+++... ++++++|+ +++++..++.+. +.++. ... .+..+ .
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~---eV~igs~r~~~~~~a~a~~l~--------~~i~~-----~~~---~dA~~--~ 60 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGH---EVIIGSSRGPKALAAAAAALG--------PLITG-----GSN---EDAAA--L 60 (211)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHC--------CCCCC-----CCH---HHHHH--C
T ss_conf 179996257187899999996797---399964788067889998645--------65334-----776---88884--3
Q ss_pred CCEEEECCCCCCCHHHHHHHHH--CCCCEEEECCC
Q ss_conf 7299973761003278999986--28868960366
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACID--SNVAYIDTAIH 114 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~--~g~hyvD~s~~ 114 (419)
+|+|+-++|......+++..-+ .|+=.||.+--
T Consensus 61 aDVVvLAVP~~a~~~v~~~l~~~~~~KIvID~tnp 95 (211)
T COG2085 61 ADVVVLAVPFEAIPDVLAELRDALGGKIVIDATNP 95 (211)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCC
T ss_conf 99899954578777699999987099099966887
No 385
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=97.16 E-value=0.0026 Score=41.10 Aligned_cols=87 Identities=14% Similarity=0.117 Sum_probs=52.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 97319998498779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|..+|.|+|+|.||+..+..|++... ++++.+|+.++++.+.+.-.-.. ..........+.+..++. ..
T Consensus 1 m~MkI~IiGaGAiG~~~a~~L~~ag~---dV~lv~r~~~~~~~~~~~g~~~~--~~~~~~~~~~v~~~~~~~----~~-- 69 (305)
T PRK05708 1 MSMTWHILGAGSLGSLWACRLARAGL---PVRLILRDRQRLAAYQQAGGLTL--VEQGQASLYAIPAETADA----PE-- 69 (305)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---CEEEEEECHHHHHHHHHCCCEEE--EECCCEEEEECCCCCCCC----CC--
T ss_conf 99889998823999999999984899---73999947899999997899899--868955787404657665----78--
Q ss_pred CCCEEEECCCCCCCHHHH
Q ss_conf 972999737610032789
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVL 98 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~ 98 (419)
..|+||-|+=.+....++
T Consensus 70 ~~D~vivavK~~~~~~a~ 87 (305)
T PRK05708 70 PIHRLLVACKAYDAEPAV 87 (305)
T ss_pred CCCEEEEEECCCCHHHHH
T ss_conf 877899980425689999
No 386
>PRK07023 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0053 Score=39.03 Aligned_cols=76 Identities=16% Similarity=0.180 Sum_probs=53.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH--
Q ss_conf 31999849-877999999999608987259996399999999998734302455555730899437898999999975--
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK-- 79 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-- 79 (419)
++.||.|+ .|+|..+++.|+++. .++++.+|+.++.. +.. ...++...++|+.|.+++...+..
T Consensus 2 ~rAlITGas~GIG~aiA~~la~~G---~~Vi~~~r~~~~~l--~~~--------~~~~~~~~~~Dl~d~~~~~~~~~~~~ 68 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPG---IAVLGVSRSRHPSL--AAR--------AGERLAEVELDLSDPAAAAAWLAGDT 68 (243)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCHHH--HHH--------CCCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 999992876299999999999879---99999979978999--986--------79975799950577899999999999
Q ss_pred -------CCCCEEEECCCC
Q ss_conf -------397299973761
Q gi|254780742|r 80 -------TNSQIIINVGSS 91 (419)
Q Consensus 80 -------~~~dvVin~~~p 91 (419)
.+.+++||.+|-
T Consensus 69 ~~~~~~~~~~~ilinNAG~ 87 (243)
T PRK07023 69 LRAFVDGASRVLLINNAGT 87 (243)
T ss_pred HHHHHHCCCEEEEEECCCC
T ss_conf 9975413775899977987
No 387
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=97.12 E-value=0.011 Score=36.95 Aligned_cols=18 Identities=11% Similarity=0.237 Sum_probs=11.5
Q ss_pred HHHHHHHCCCCCCCCCCC
Q ss_conf 999999879987786207
Q gi|254780742|r 362 ATAILIAQGIWDIGKMVN 379 (419)
Q Consensus 362 ~aa~lil~g~i~~~GV~~ 379 (419)
-+++++.+|+++..-+++
T Consensus 298 ~~l~li~~g~i~~~~lIt 315 (343)
T PRK09880 298 TAVSWLANGVINPLPLLS 315 (343)
T ss_pred HHHHHHHCCCCCHHHEEE
T ss_conf 999999859998045588
No 388
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.11 E-value=0.0021 Score=41.67 Aligned_cols=46 Identities=22% Similarity=0.343 Sum_probs=37.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 7319998498779999999996089872599963999999999987343
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYK 50 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~ 50 (419)
-|+|-|+|||.||+.+|..++.+. .++++.|++++.+++..+.+.+
T Consensus 3 i~~VaViGaG~mG~~IA~~~a~~G---~~V~l~D~~~~~l~~~~~~i~~ 48 (282)
T PRK05808 3 IQKIGVIGAGTMGNGIAQVCAVAG---YDVVMVDISDEAVDRGLATITK 48 (282)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHHHHH
T ss_conf 268999897889999999999579---9389997998999999999999
No 389
>PTZ00325 malate dehydrogenase; Provisional
Probab=97.09 E-value=0.0024 Score=41.29 Aligned_cols=78 Identities=13% Similarity=0.156 Sum_probs=48.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|. ||.|+|| |.||+.++..|..+.- ..++++-|.+..+.+ +..+...... ..... .-..+ ..+.++
T Consensus 1 m~-KV~IIGA~G~VG~s~A~~l~~~~~-~~elvL~Di~~a~g~--a~Dl~~~~~~---~~~~~--~~~~~---~~e~~~- 67 (313)
T PTZ00325 1 MF-KVAVLGAAGGIGQPLSLLLKRNPY-VSTLSLYDIVGAPGV--AADLSHIPSP---AKVTG--YAKGE---LHKAVD- 67 (313)
T ss_pred CC-EEEEECCCCHHHHHHHHHHHHCCC-CCEEEEEECCCCHHH--HHHHHCCCCC---CCCCE--ECCCC---HHHHHC-
T ss_conf 93-899989998699999999983899-777999808972668--9888675553---56654--52798---889848-
Q ss_pred CCCCEEEECCCCC
Q ss_conf 3972999737610
Q gi|254780742|r 80 TNSQIIINVGSSF 92 (419)
Q Consensus 80 ~~~dvVin~~~p~ 92 (419)
++|+||.++|..
T Consensus 68 -~aDIVVitaG~~ 79 (313)
T PTZ00325 68 -GADVVLIVAGVP 79 (313)
T ss_pred -CCCEEEECCCCC
T ss_conf -998999888988
No 390
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=97.09 E-value=0.0035 Score=40.21 Aligned_cols=145 Identities=10% Similarity=0.118 Sum_probs=85.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCC---CEEEEECCCCHHHHHHHH
Q ss_conf 97319998498779999999996089872599963999999999987343024555557---308994378989999999
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGK---LAIHQVDALNIKAVVELI 77 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~D~~d~~~l~~~~ 77 (419)
|..+|.|-|.|.+|+.+|+.+..+.+. .-+-|++..++-.-.++.+.+-........+ |+-.-+++. -.+.+++
T Consensus 1 m~ikV~INGyGtIGkRVAdav~~q~Dm-elVGV~k~~pd~~a~~a~~kG~~vy~~~~~~~~~F~~aGi~v~--Gtiedll 77 (338)
T PRK04207 1 MMIKVAVNGYGTIGKRVADAVAAQDDM-EVVGVSKTKPDYEARVAVERGYPLYVADPERLDAFEKAGIEVA--GTIEDLL 77 (338)
T ss_pred CCEEEEEECCCCHHHHHHHHHHCCCCC-EEEEEECCCCCHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCC--CCHHHHH
T ss_conf 948999824860558998887359981-8997867999778999998699678537766656875698666--7688975
Q ss_pred HHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECC---CHHHH
Q ss_conf 753972999737610032789999862886896036642000014420000357751088885188699537---50111
Q gi|254780742|r 78 KKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGA---GFDPG 154 (419)
Q Consensus 78 ~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~---G~~PG 154 (419)
+ ++|+||.|.|.+.+..-.+.=.++|+..|=-++...... +..|... .=+++|..+...-+.+| |+.+-
T Consensus 78 ~--~aDvVvDcTP~g~G~~Nk~~Y~~~g~kaIfQGGEk~~va---~~sFna~---~Ny~~a~Gk~~vrvvSCNTTgL~R~ 149 (338)
T PRK04207 78 E--KADIVVDATPGGVGAKNKPLYEKAGVKAIFQGGEKAEVA---EVSFNAL---ANYEEAIGKDYVRVVSCNTTGLCRT 149 (338)
T ss_pred H--CCCEEEECCCCCCCCCCHHHHHHCCCCEEEECCCCCCCC---CCEEEEE---CCHHHHCCCCCEEEEEECCCCHHHH
T ss_conf 2--189999899976440022768875983799658876767---7506730---1457763876379965320345788
Q ss_pred HH
Q ss_conf 48
Q gi|254780742|r 155 VV 156 (419)
Q Consensus 155 l~ 156 (419)
+.
T Consensus 150 l~ 151 (338)
T PRK04207 150 LY 151 (338)
T ss_pred HH
T ss_conf 99
No 391
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=97.08 E-value=0.0023 Score=41.48 Aligned_cols=80 Identities=15% Similarity=0.161 Sum_probs=54.3
Q ss_pred EEEECC-CHHHHHHHHHHHHCCC-CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 999849-8779999999996089-87259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 5 VLIIGA-GGVAHVVAHKCAQNND-ILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 5 ilv~Ga-G~vG~~~~~~L~~~~~-~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
|.|+|| |.||+.+++.|+.+.. ...++++-|+++++++..+-.+......... ..... - .| ..+.++ ++
T Consensus 1 V~IIGA~G~VG~~~a~~l~~~~~~~~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~--~~v~~-~-~~---~~~~~~--da 71 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLAD--IKVSI-T-DD---PYEAFK--DA 71 (263)
T ss_pred CEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCC--CEEEE-C-CC---HHHHHC--CC
T ss_conf 9898779779999999998289999988999958987208799999854523578--73997-4-87---389837--99
Q ss_pred CEEEECCCCCC
Q ss_conf 29997376100
Q gi|254780742|r 83 QIIINVGSSFL 93 (419)
Q Consensus 83 dvVin~~~p~~ 93 (419)
|+||.++|...
T Consensus 72 DvVVitag~~~ 82 (263)
T cd00650 72 DVVIITAGVGR 82 (263)
T ss_pred CEEEEECCCCC
T ss_conf 89999057788
No 392
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=97.07 E-value=0.0038 Score=40.00 Aligned_cols=97 Identities=14% Similarity=0.269 Sum_probs=55.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-------------------HHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 7319998498779999999996089872599963999-------------------999999987343024555557308
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-------------------QKCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
+-+|||+|+|++|..++..|+..+ + ..+++.|-+. .|++..++.+...++ .+++
T Consensus 19 ~s~Vli~G~~glg~Ei~Knlvl~G-v-~~i~i~D~~~v~~~dl~~qf~~~~~dvg~~ra~~~~~~l~~lNp-----~v~v 91 (286)
T cd01491 19 KSNVLISGLGGLGVEIAKNLILAG-V-KSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNP-----YVPV 91 (286)
T ss_pred HCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCCCCHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHCC-----CCEE
T ss_conf 592999998763999999999739-9-65999959968867763472257778578889999999996489-----8258
Q ss_pred EEECCCCHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEE
Q ss_conf 994378989999999753972999737610-032789999862886896
Q gi|254780742|r 63 HQVDALNIKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYID 110 (419)
Q Consensus 63 ~~~D~~d~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD 110 (419)
...+ .+. ..+.++++ |+||.+-.++ .-..+-++|-++++.++-
T Consensus 92 ~~~~-~~~--~~~~~~~f--dvVv~t~~~~~~~~~iN~~cR~~~i~Fi~ 135 (286)
T cd01491 92 TVST-GPL--TTDELLKF--QVVVLTDASLEDQLKINEFCHSPGIKFIS 135 (286)
T ss_pred EECC-CCC--CHHHHCCC--CEEEEECCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 9635-777--88885388--88999189989999998888775981999
No 393
>KOG1611 consensus
Probab=97.07 E-value=0.0067 Score=38.31 Aligned_cols=84 Identities=21% Similarity=0.307 Sum_probs=63.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHH-HHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-8779999999996089872599963999999-999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKC-SKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|.|+|.|| -++|-..++.|.+..++ ..|.-+-||++++ +++..+ ...++|+.+.++|+.+.+++..++++.
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i-~~iiat~r~~e~a~~~l~~k------~~~d~rvHii~Ldvt~deS~~~~~~~V 76 (249)
T KOG1611 4 KSVFITGANRGIGLGLVKELLKDKGI-EVIIATARDPEKAATELALK------SKSDSRVHIIQLDVTCDESIDNFVQEV 76 (249)
T ss_pred CCEEEECCCCCHHHHHHHHHHCCCCC-EEEEEECCCHHHHHHHHHHH------HCCCCCEEEEEEECCCHHHHHHHHHHH
T ss_conf 40899626762107788998357884-79998447967765787876------325885279987336577799999998
Q ss_pred -------CCCEEEECCCCCC
Q ss_conf -------9729997376100
Q gi|254780742|r 81 -------NSQIIINVGSSFL 93 (419)
Q Consensus 81 -------~~dvVin~~~p~~ 93 (419)
+.++.||.+|-+.
T Consensus 77 ~~iVg~~GlnlLinNaGi~~ 96 (249)
T KOG1611 77 EKIVGSDGLNLLINNAGIAL 96 (249)
T ss_pred HHHCCCCCCEEEEECCCEEE
T ss_conf 75146687058885460013
No 394
>PRK10083 putative dehydrogenase; Provisional
Probab=97.06 E-value=0.013 Score=36.44 Aligned_cols=38 Identities=11% Similarity=0.218 Sum_probs=17.9
Q ss_pred HHHHHHHCCCCCCCCCCC----HHHCCHHHHHHHHHHC-CCEEEE
Q ss_conf 999999879987786207----7885948999999967-980999
Q gi|254780742|r 362 ATAILIAQGIWDIGKMVN----IEELPPKPFLGTLQRM-GLATSL 401 (419)
Q Consensus 362 ~aa~lil~g~i~~~GV~~----Pe~~~~~~fl~~L~~~-Gi~~~v 401 (419)
.+++++.+|+++..-+++ .|.+ ..-++.|++. +-..+|
T Consensus 291 ~~~~li~~g~i~~~~lIt~~f~L~~~--~~A~~~~~~~~~~~~Kv 333 (339)
T PRK10083 291 VVIDWLAKGLIDPEKLITHTFDFQHV--ADAIELFEKDQRHCCKV 333 (339)
T ss_pred HHHHHHHCCCCCHHHEEEEEEEHHHH--HHHHHHHHCCCCCCEEE
T ss_conf 99999985999915708999898999--99999986599895899
No 395
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase; InterPro: IPR011304 This entry represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme functions as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities.; GO: 0004459 L-lactate dehydrogenase activity, 0019642 anaerobic glycolysis, 0005737 cytoplasm.
Probab=97.06 E-value=0.0015 Score=42.67 Aligned_cols=78 Identities=15% Similarity=0.181 Sum_probs=54.2
Q ss_pred EECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEE
Q ss_conf 98498779999999996089872599963999999999987343024555557308994378989999999753972999
Q gi|254780742|r 7 IIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQIII 86 (419)
Q Consensus 7 v~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dvVi 86 (419)
|+|+|.||+.+|+-|+.+ +...+++|-|.|++|++-=+--|.-..+....+...+. ..|.+. |+ ++|+||
T Consensus 1 iiG~G~VGss~A~a~~~~-g~a~E~vliDin~~ka~Gea~DL~ha~~f~~~~~~~v~---~gdY~d----c~--daD~vV 70 (302)
T TIGR01771 1 IIGAGNVGSSTAFALLNQ-GLADEIVLIDINKDKAEGEAMDLQHAASFLPTPGVKVR---AGDYSD----CK--DADLVV 70 (302)
T ss_pred CCCCCCHHHHHHHHHHHC-CCCCEEEEEECCHHHHHHHHHHHHCCHHHCCCCCEEEE---CCCHHH----HC--CCCEEE
T ss_conf 911486189999999731-50318878834757789878655222222378611776---189799----63--897899
Q ss_pred ECCCCCCC
Q ss_conf 73761003
Q gi|254780742|r 87 NVGSSFLN 94 (419)
Q Consensus 87 n~~~p~~~ 94 (419)
-|||+.+.
T Consensus 71 ITAG~~QK 78 (302)
T TIGR01771 71 ITAGAPQK 78 (302)
T ss_pred EECCCCCC
T ss_conf 93277753
No 396
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.05 E-value=0.0045 Score=39.48 Aligned_cols=91 Identities=20% Similarity=0.218 Sum_probs=58.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCC-CCCEEEEEECC-HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 319998498779999999996089-87259996399-9999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNND-ILGDINIASRT-LQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~-~~~~i~va~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
++|.++|+|.||++++.-|.+..- ...++.+.+|+ .++++.+.+... +... .|.. ++++
T Consensus 4 m~I~fIG~GnMg~Aii~gl~~~~~~~~~~i~v~~r~~~~~~~~l~~~~~----------v~~~----~~~~---~~~~-- 64 (279)
T PRK07679 4 QNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYG----------VKGT----HNKK---ELLT-- 64 (279)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHC----------CEEE----CCHH---HHHH--
T ss_conf 8899987689999999999978799975799978984999999999719----------6663----7779---9984--
Q ss_pred CCCEEEECCCCCCCHHHHHHH---HHCCCCEEEEC
Q ss_conf 972999737610032789999---86288689603
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRAC---IDSNVAYIDTA 112 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~---i~~g~hyvD~s 112 (419)
++|+|+-|+-|..-..+++-. +..+...|.+.
T Consensus 65 ~~diI~LaVKP~~~~~v~~~i~~~~~~~~~iISi~ 99 (279)
T PRK07679 65 DANILFLAMKPKDVAEALTPFKEYIHNNVLIISLL 99 (279)
T ss_pred HCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 49999995278999999999875458992999974
No 397
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=97.05 E-value=0.028 Score=34.16 Aligned_cols=113 Identities=8% Similarity=0.086 Sum_probs=67.2
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
.++|.|.|.+|+.+++.|.++. ..+++-|.|+++.++..+ .+..+..-|+.|++-++++=- .++.
T Consensus 419 hvii~G~Gr~G~~va~~L~~~~---~~~vvid~d~~~v~~~~~-----------~g~~v~~GDa~~~~~L~~agi-~~A~ 483 (558)
T PRK10669 419 HALLVGYGRVGSLLGEKLLASG---IPLVVIETSRTRVDELRE-----------RGIRAVLGNAANEEIMQLAHL-DCAR 483 (558)
T ss_pred CEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHH-----------CCCEEEEECCCCHHHHHHCCC-CCCC
T ss_conf 9899898866999999999879---988999898999999996-----------899799978998899985791-3249
Q ss_pred EEEECCCCCC-CHHHHHHHHHC--CCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 9997376100-32789999862--88689603664200001442000035775108888518869953
Q gi|254780742|r 84 IIINVGSSFL-NMSVLRACIDS--NVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILG 148 (419)
Q Consensus 84 vVin~~~p~~-~~~v~~a~i~~--g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~ 148 (419)
+||.+.+... +..+++.+-+. +++.+--+.+.+ --++-+++|+.-+..
T Consensus 484 ~vvit~~d~~~~~~iv~~~r~~~p~~~IiaRa~~~~-----------------~~~~L~~aGA~~VV~ 534 (558)
T PRK10669 484 WLLLTIPNGYEAGEIVASAREKNPDIEIIARAHYDD-----------------EVAYITERGANQVVM 534 (558)
T ss_pred EEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCHH-----------------HHHHHHHCCCCEEEC
T ss_conf 999981988999999999998786986999979899-----------------999999779998989
No 398
>KOG4169 consensus
Probab=97.04 E-value=0.0032 Score=40.47 Aligned_cols=87 Identities=16% Similarity=0.212 Sum_probs=64.7
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 3199984-98779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIG-AGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~G-aG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
|++++.| ||++|......|.... ...++.+-+.|+.+..+ +|.. ......+-+.+.|+.+..++.+.++++
T Consensus 6 Kna~vtggagGIGl~~sk~Ll~kg---ik~~~i~~~~En~~a~a-kL~a---i~p~~~v~F~~~DVt~~~~~~~~f~ki~ 78 (261)
T KOG4169 6 KNALVTGGAGGIGLATSKALLEKG---IKVLVIDDSEENPEAIA-KLQA---INPSVSVIFIKCDVTNRGDLEAAFDKIL 78 (261)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CHHEEEHHHHHCHHHHH-HHHC---CCCCCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 458996378636699999999767---15406104014789999-8860---3998439999801200788999999999
Q ss_pred ----CCCEEEECCCCCCCHH
Q ss_conf ----9729997376100327
Q gi|254780742|r 81 ----NSQIIINVGSSFLNMS 96 (419)
Q Consensus 81 ----~~dvVin~~~p~~~~~ 96 (419)
..|++||-+|-+.+..
T Consensus 79 ~~fg~iDIlINgAGi~~dkd 98 (261)
T KOG4169 79 ATFGTIDILINGAGILDDKD 98 (261)
T ss_pred HHHCCEEEEECCCCCCCCHH
T ss_conf 87094579971664446120
No 399
>PRK00885 phosphoribosylamine--glycine ligase; Provisional
Probab=97.04 E-value=0.014 Score=36.21 Aligned_cols=93 Identities=20% Similarity=0.277 Sum_probs=71.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
||||+|.|+=-.+++..|.+.... .++.++--|..-.+- .+...+|+.|.+.+.+++++++.|
T Consensus 2 kVLviGsGgREHAia~kl~~s~~v-~~v~~~PGN~G~~~~----------------~~~~~i~~~d~~~l~~~a~~~~id 64 (424)
T PRK00885 2 KVLVIGSGGREHALAWKLAQSPLV-EKVYVAPGNAGTALE----------------AENVAIDVTDIEALVAFAKEEGID 64 (424)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCC-CEEEEECCCHHHHHC----------------CEEECCCCCCHHHHHHHHHHCCCC
T ss_conf 799988888999999999739798-989992897588741----------------736512857999999999984999
Q ss_pred EEEECCCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf 999737610032789999862886896036
Q gi|254780742|r 84 IIINVGSSFLNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 84 vVin~~~p~~~~~v~~a~i~~g~hyvD~s~ 113 (419)
+||-.=.-++...++.++.++|...+--+-
T Consensus 65 lviiGPE~pL~~Gi~D~l~~~gi~vfGP~k 94 (424)
T PRK00885 65 LTVVGPEAPLVAGIVDAFRAAGLKIFGPTK 94 (424)
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEECCCH
T ss_conf 999896678873579999506994689497
No 400
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=97.03 E-value=0.0079 Score=37.84 Aligned_cols=119 Identities=8% Similarity=-0.037 Sum_probs=72.0
Q ss_pred EEEEECCCHH-HHHHHHHHHHCCCC--CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 1999849877-99999999960898--72599963999999999987343024555557308994378989999999753
Q gi|254780742|r 4 NVLIIGAGGV-AHVVAHKCAQNNDI--LGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 4 ~ilv~GaG~v-G~~~~~~L~~~~~~--~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
||.++|||++ ....+..|+++.+. ..+|++.|.|.+|++.+. .+.++........+++.. ...+++.++
T Consensus 2 KI~iIGaGS~~t~~li~~l~~~~~~l~~~ei~L~DId~~rL~~~~-~la~~~~~~~g~~~~i~~-----ttdr~eAL~-- 73 (437)
T cd05298 2 KIVIAGGGSTYTPGIVKSLLDRKEDFPLRELVLYDIDAERQEKVA-EAVKILFKENYPEIKFVY-----TTDPEEAFT-- 73 (437)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHH-HHHHHHHHHHCCCEEEEE-----ECCHHHHHC--
T ss_conf 699989846877999999982820069888999779999999999-999999985299817999-----679999857--
Q ss_pred CCCEEEECCCCC-CC--HHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHH
Q ss_conf 972999737610-03--278999986288689603664200001442000035
Q gi|254780742|r 81 NSQIIINVGSSF-LN--MSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNY 130 (419)
Q Consensus 81 ~~dvVin~~~p~-~~--~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~ 130 (419)
++|.|||+.-+- +. ..=.+...++|+-.-|++|-....+.+.+-|.+-+.
T Consensus 74 gADfVi~~irvGg~~~r~~De~Ip~kyGivgqeT~G~GGi~~alRtiPv~ldi 126 (437)
T cd05298 74 DADFVFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIEL 126 (437)
T ss_pred CCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEHHHHHHH
T ss_conf 99999996652683267888767987597760156646224011449999999
No 401
>KOG2013 consensus
Probab=97.02 E-value=0.0019 Score=42.05 Aligned_cols=103 Identities=20% Similarity=0.323 Sum_probs=75.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-------------------HHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 319998498779999999996089872599963999-------------------9999999873430245555573089
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-------------------QKCSKIIDSIYKKKSLKIDGKLAIH 63 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~~ 63 (419)
.+|||+||||+|-.....|+... +.+|.+.|-|- +|+...++.+.+- .....+...
T Consensus 13 ~riLvVGaGGIGCELLKnLal~g--f~~IhiIDlDTIDlSNLNRQFLFrkkhVgqsKA~vA~~~v~~F---npn~~l~~y 87 (603)
T KOG2013 13 GRILVVGAGGIGCELLKNLALTG--FEEIHIIDLDTIDLSNLNRQFLFRKKHVGQSKATVAAKAVKQF---NPNIKLVPY 87 (603)
T ss_pred CEEEEEECCCCCHHHHHHHHHHC--CCEEEEEECCCEECCCHHHHHEEEHHHCCCHHHHHHHHHHHHH---CCCCCEEEC
T ss_conf 71899905732199999999826--7705797325320210124550204122761889999999974---977746851
Q ss_pred EECCCCHHHHHHHHHHCCCCEEEECCCCCC-CHHHHHHHHHCCCCEEEEC
Q ss_conf 943789899999997539729997376100-3278999986288689603
Q gi|254780742|r 64 QVDALNIKAVVELIKKTNSQIIINVGSSFL-NMSVLRACIDSNVAYIDTA 112 (419)
Q Consensus 64 ~~D~~d~~~l~~~~~~~~~dvVin~~~p~~-~~~v~~a~i~~g~hyvD~s 112 (419)
+.++.+++--.+.++++ |+|.|++--.- ...|=+.|+.+.++.||-+
T Consensus 88 hanI~e~~fnv~ff~qf--diV~NaLDNlaAR~yVNr~C~~a~vPLIesG 135 (603)
T KOG2013 88 HANIKEPKFNVEFFRQF--DIVLNALDNLAARRYVNRMCLAASVPLIESG 135 (603)
T ss_pred CCCCCCCCHHHHHHHHH--HHHHHHHCCHHHHHHHHHHHHHHCCCCEECC
T ss_conf 13346853278999999--9999852239899898888876068723057
No 402
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=97.02 E-value=0.011 Score=36.90 Aligned_cols=97 Identities=14% Similarity=0.214 Sum_probs=52.0
Q ss_pred CEEEEE-CCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC---HHHHHHHHH
Q ss_conf 319998-4987799999999960898725999639999999999873430245555573089943789---899999997
Q gi|254780742|r 3 KNVLII-GAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALN---IKAVVELIK 78 (419)
Q Consensus 3 k~ilv~-GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d---~~~l~~~~~ 78 (419)
++|||. |+|+||..+++ |++.... +++...++.+|++. ++++... ....+|..+ .+.+.++..
T Consensus 106 ~~VlI~gg~G~vG~~aiq-lak~~Ga--~Vi~t~~s~~k~~~-~~~lG~~---------~~~v~~~~~~~~~~~v~~~t~ 172 (288)
T smart00829 106 ESVLIHAAAGGVGQAAIQ-LAQHLGA--EVFATAGSPEKRDF-LRELGIP---------DDHIFSSRDLSFADEILRATG 172 (288)
T ss_pred CEEEEECCCCHHHHHHHH-HHHHCCC--CEEEEECCHHHHHH-HHHCCCC---------CCEEEECCCCCHHHHHHHHHC
T ss_conf 999997898677799999-9997398--30034088899999-9976999---------607621799509999998708
Q ss_pred HCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf 53972999737610032789999862886896036
Q gi|254780742|r 79 KTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 79 ~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~ 113 (419)
+.+.|+|++|++-..-...+ .|+..+-+|+.++.
T Consensus 173 g~gvDvv~d~vgg~~~~~~~-~~l~~~G~~v~ig~ 206 (288)
T smart00829 173 GRGVDVVLNSLAGEFLDASL-RCLAPGGRFVEIGK 206 (288)
T ss_pred CCCCEEEEECCCHHHHHHHH-HHHCCCCEEEEECC
T ss_conf 98827999898689999999-97536988999756
No 403
>PRK07660 consensus
Probab=97.02 E-value=0.0018 Score=42.21 Aligned_cols=45 Identities=22% Similarity=0.417 Sum_probs=37.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 319998498779999999996089872599963999999999987343
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYK 50 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~ 50 (419)
|+|.|+|||.||+.+|..++.+. .++++.|++.+.+++..+.+.+
T Consensus 4 k~VaViGaG~MG~gIA~~~a~~G---~~V~l~D~~~~~l~~~~~~i~~ 48 (283)
T PRK07660 4 QKIVVIGAGQMGSGIAQVCAMAG---YDVKVQDLKQEQLDRGLAIITK 48 (283)
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHHHHH
T ss_conf 88999896989999999999669---8189997988999999999999
No 404
>KOG1430 consensus
Probab=97.01 E-value=0.0051 Score=39.11 Aligned_cols=99 Identities=15% Similarity=0.241 Sum_probs=68.3
Q ss_pred EEEEEC-CCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 199984-9877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIG-AGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~G-aG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
.+||.| +|..|+.++..|.++... .++-++|.....-.-..+.... ...+++..+.|..|...+...+.+ +
T Consensus 6 ~vlVtGG~GflG~hlv~~L~~~~~~-~~irv~D~~~~~~~~~~e~~~~-----~~~~v~~~~~D~~~~~~i~~a~~~--~ 77 (361)
T KOG1430 6 SVLVTGGSGFLGQHLVQALLENELK-LEIRVVDKTPTQSNLPAELTGF-----RSGRVTVILGDLLDANSISNAFQG--A 77 (361)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCC-CEEEEECCCCCCCCCCHHHHCC-----CCCCEEEEECCHHHHHHHHHHCCC--C
T ss_conf 7999898337899999999845666-1799953677555651455334-----677436872230000556652157--6
Q ss_pred CEEEECCCCC--C--------------C-HHHHHHHHHCCCCEEE
Q ss_conf 2999737610--0--------------3-2789999862886896
Q gi|254780742|r 83 QIIINVGSSF--L--------------N-MSVLRACIDSNVAYID 110 (419)
Q Consensus 83 dvVin~~~p~--~--------------~-~~v~~a~i~~g~hyvD 110 (419)
-+|..++.+. + + ..++++|.+.|+.-+-
T Consensus 78 ~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lI 122 (361)
T KOG1430 78 VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLI 122 (361)
T ss_pred EEEEECCCCCCCCCCCCHHHHEEECCHHHHHHHHHHHHHCCCEEE
T ss_conf 078751656752023561252141405089999999982987899
No 405
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase; InterPro: IPR010110 This entry represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.; GO: 0004764 shikimate 5-dehydrogenase activity, 0005737 cytoplasm.
Probab=97.00 E-value=0.0033 Score=40.40 Aligned_cols=103 Identities=22% Similarity=0.301 Sum_probs=63.8
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
.=||+||||+.+++++-|++-. + .+|+|-.|+.+|+.+|.+.+...... .+++. +| . ++.+ ++-....
T Consensus 132 ~glviGaGGtsrAA~yaL~sLG-~-~~I~~inR~~dKl~~L~~~~~~~~~i---~~~e~--l~---~-~~~~-i~v~~~~ 199 (291)
T TIGR01809 132 AGLVIGAGGTSRAAVYALASLG-V-KDIYVINRSKDKLKKLVDLLVSEFVI---IRLES--LD---K-ELEE-IEVKDVE 199 (291)
T ss_pred EEEEECCCCHHHHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHCCCCEE---EEEEC--CC---C-CCCC-CEEEEEE
T ss_conf 0588838721489999998669-9-70699735866766887741356135---66510--13---3-4110-2024567
Q ss_pred EEEECCCCC--CCHHHHH---HHHHCCC------CEEEECCCCCCH
Q ss_conf 999737610--0327899---9986288------689603664200
Q gi|254780742|r 84 IIINVGSSF--LNMSVLR---ACIDSNV------AYIDTAIHESPL 118 (419)
Q Consensus 84 vVin~~~p~--~~~~v~~---a~i~~g~------hyvD~s~~~~~~ 118 (419)
|.|||+|.. .++.++. --+..+. -++|+.|....+
T Consensus 200 v~vStvPaD~p~d~~~l~~~~~fl~~~~~~~f~~~lLdaaY~p~~T 245 (291)
T TIGR01809 200 VAVSTVPADKPLDDEVLEALKRFLLKKAKAAFVGILLDAAYDPSVT 245 (291)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
T ss_conf 8886157886468889999989875133001101255431488986
No 406
>KOG2017 consensus
Probab=97.00 E-value=0.0058 Score=38.75 Aligned_cols=102 Identities=15% Similarity=0.307 Sum_probs=67.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHH-------------------HHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 3199984987799999999960898725999639999-------------------999999873430245555573089
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQ-------------------KCSKIIDSIYKKKSLKIDGKLAIH 63 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~~ 63 (419)
..|||+|||+-|.+++.||+... + .++-+.|.|.- |++..+..+...+ +.+++.
T Consensus 67 s~VLVVGaGGLGcPa~~YLaaaG-v-G~lGiVD~DvVe~sNlhRQVlh~ea~vg~~Ka~sA~~~lr~lN-----s~v~v~ 139 (427)
T KOG2017 67 SSVLVVGAGGLGCPAAQYLAAAG-V-GRLGIVDYDVVELSNLHRQVLHTEARVGMHKAESAAAFLRRLN-----SHVEVQ 139 (427)
T ss_pred CCEEEECCCCCCCHHHHHHHHCC-C-CEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCCEEE
T ss_conf 63799816877887899998737-7-8130310543230007888762165410678999999999609-----972564
Q ss_pred EEC-CCCHHHHHHHHHHCCCCEEEECCCC-CCCHHHHHHHHHCCCCEEEECC
Q ss_conf 943-7898999999975397299973761-0032789999862886896036
Q gi|254780742|r 64 QVD-ALNIKAVVELIKKTNSQIIINVGSS-FLNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 64 ~~D-~~d~~~l~~~~~~~~~dvVin~~~p-~~~~~v~~a~i~~g~hyvD~s~ 113 (419)
.-. ..++...-++++++ |+|++|.-- ...|-+-.+|...|++.|.-|.
T Consensus 140 ~y~~~L~~sNa~~Ii~~Y--dvVlDCTDN~~TRYLisD~CVlLgkpLVSgSa 189 (427)
T KOG2017 140 TYNEFLSSSNAFDIIKQY--DVVLDCTDNVPTRYLISDVCVLLGKPLVSGSA 189 (427)
T ss_pred ECHHHCCCHHHHHHHHCC--CEEEECCCCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf 103323620177775046--46887578854001156699871986000210
No 407
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=96.99 E-value=0.0081 Score=37.76 Aligned_cols=102 Identities=17% Similarity=0.193 Sum_probs=65.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.++|.|+|+|.-|++.+..|+++.+ ++.+.+|+++-.+++.+... +..+-+.+... -++.-..++.+.++ +
T Consensus 1 ~~kI~ViGaGswGTALA~~la~ng~---~V~lw~r~~~~~~~i~~~~~---N~~yLp~i~lp-~~l~at~Dl~~a~~--~ 71 (329)
T COG0240 1 MMKIAVIGAGSWGTALAKVLARNGH---EVRLWGRDEEIVAEINETRE---NPKYLPGILLP-PNLKATTDLAEALD--G 71 (329)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHCCC---CCCCCCCCCCC-CCCCCCCCHHHHHH--C
T ss_conf 9618998178379999999996698---46999628999999973476---70105996288-63222468999972--2
Q ss_pred CCEEEECCCCCCCHHHHHH---HHHCCCCEEEEC
Q ss_conf 7299973761003278999---986288689603
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRA---CIDSNVAYIDTA 112 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a---~i~~g~hyvD~s 112 (419)
+|+|+-++|-.+-..+++. .+..++..|-.+
T Consensus 72 ad~iv~avPs~~~r~v~~~l~~~l~~~~~iv~~s 105 (329)
T COG0240 72 ADIIVIAVPSQALREVLRQLKPLLLKDAIIVSAT 105 (329)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 9999997875789999998764336787499974
No 408
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.99 E-value=0.003 Score=40.70 Aligned_cols=92 Identities=13% Similarity=0.131 Sum_probs=57.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCH---HHHHHHH
Q ss_conf 9731999849877999999999608987259996399999999998734302455555730899437898---9999999
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNI---KAVVELI 77 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~ 77 (419)
|.++|+|+|.|.||+.+++.|.+... ...+.|++.++.+..... .+++.|. +......
T Consensus 2 ~~~~v~IvG~GliG~s~a~~l~~~g~---~v~i~g~d~~~~~~~~a~----------------~lgv~d~~~~~~~~~~~ 62 (279)
T COG0287 2 ASMKVGIVGLGLMGGSLARALKEAGL---VVRIIGRDRSAATLKAAL----------------ELGVIDELTVAGLAEAA 62 (279)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---EEEEECCCCCHHHHHHHH----------------HCCCCHHHCCCHHHHHC
T ss_conf 86489998774677999999997698---479972477467787766----------------35853010011555413
Q ss_pred HHCCCCEEEECCCCCCCHHHHHHH---HHCCCCEEEECC
Q ss_conf 753972999737610032789999---862886896036
Q gi|254780742|r 78 KKTNSQIIINVGSSFLNMSVLRAC---IDSNVAYIDTAI 113 (419)
Q Consensus 78 ~~~~~dvVin~~~p~~~~~v~~a~---i~~g~hyvD~s~ 113 (419)
. ++|+||=++|...-..+++.- +..|+-..|++.
T Consensus 63 ~--~aDlVivavPi~~~~~~l~~l~~~l~~g~iv~Dv~S 99 (279)
T COG0287 63 A--EADLVIVAVPIEATEEVLKELAPHLKKGAIVTDVGS 99 (279)
T ss_pred C--CCCEEEEECCHHHHHHHHHHHCCCCCCCCEEECCCC
T ss_conf 5--699899957788999999986303799988973642
No 409
>pfam02670 DXP_reductoisom 1-deoxy-D-xylulose 5-phosphate reductoisomerase. This is a family of 1-deoxy-D-xylulose 5-phosphate reductoisomerases. This enzyme catalyses the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate in the presence of NADPH. This reaction is part of the terpenoid biosynthesis pathway.
Probab=96.98 E-value=0.012 Score=36.56 Aligned_cols=101 Identities=17% Similarity=0.149 Sum_probs=71.5
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHHHHCCCCCC---------------CCCEEEEECC
Q ss_conf 999849-877999999999608987-25999639999999999873430245555---------------5730899437
Q gi|254780742|r 5 VLIIGA-GGVAHVVAHKCAQNNDIL-GDINIASRTLQKCSKIIDSIYKKKSLKID---------------GKLAIHQVDA 67 (419)
Q Consensus 5 ilv~Ga-G~vG~~~~~~L~~~~~~~-~~i~va~r~~~~~~~~~~~l~~~~~~~~~---------------~~~~~~~~D~ 67 (419)
|.|+|+ |.+|+.+..-+.++++.+ .....|.+|.+++.+.+.++.-......+ .+.+. .
T Consensus 1 I~IlGsTGSIG~~tL~Vi~~~~~~f~v~~Lsa~~N~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~i----~ 76 (129)
T pfam02670 1 ITILGSTGSIGTQTLDVIRRNPDRFEVVALSAGRNVELLAEQIKEFKPKYVAVADEEAAEELKEALAGAGLKTEV----L 76 (129)
T ss_pred CEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCCEE----E
T ss_conf 989767868899999999959567189999834789999999997399799995899999999863247887379----8
Q ss_pred CCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 898999999975397299973761003278999986288689
Q gi|254780742|r 68 LNIKAVVELIKKTNSQIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 68 ~d~~~l~~~~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
...+.+.++++..+.|+||++.--+.+..-.-.++++|....
T Consensus 77 ~g~~~l~~~~~~~~~D~vi~AIsG~aGL~pt~~ai~~gk~ia 118 (129)
T pfam02670 77 AGEEGLCELAALPEADIVVNAIVGAAGLLPTLAAIKAGKTIA 118 (129)
T ss_pred ECHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEE
T ss_conf 788999999707788999981565013999999998699899
No 410
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=96.98 E-value=0.016 Score=35.86 Aligned_cols=97 Identities=15% Similarity=0.227 Sum_probs=61.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC---HHHHHHHHH
Q ss_conf 31999849-87799999999960898725999639999999999873430245555573089943789---899999997
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALN---IKAVVELIK 78 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d---~~~l~~~~~ 78 (419)
..|||.|+ |+||+.+++ |++.... ..+++++++ ++.+ ++.++... ..+|..+ .+.++++..
T Consensus 144 ~~VLv~gaaGgVG~~aiQ-lAk~~G~-~~v~~~~s~-~k~~-~~~~lGAd-----------~vi~y~~~d~~~~v~~~t~ 208 (326)
T COG0604 144 ETVLVHGAAGGVGSAAIQ-LAKALGA-TVVAVVSSS-EKLE-LLKELGAD-----------HVINYREEDFVEQVRELTG 208 (326)
T ss_pred CEEEEECCCCHHHHHHHH-HHHHCCC-CEEEEECCH-HHHH-HHHHCCCC-----------EEEECCCCCHHHHHHHHHC
T ss_conf 979997785469999999-9998499-589998175-7889-99873998-----------8970564248999999837
Q ss_pred HCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCC
Q ss_conf 5397299973761003278999986288689603664
Q gi|254780742|r 79 KTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHE 115 (419)
Q Consensus 79 ~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~ 115 (419)
+.+.|+|++++|..+-.. .-.++..+-.++.+....
T Consensus 209 g~gvDvv~D~vG~~~~~~-~l~~l~~~G~lv~ig~~~ 244 (326)
T COG0604 209 GKGVDVVLDTVGGDTFAA-SLAALAPGGRLVSIGALS 244 (326)
T ss_pred CCCCCEEEECCCHHHHHH-HHHHHCCCCEEEEEECCC
T ss_conf 998788997986799999-999742595899980688
No 411
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.96 E-value=0.0082 Score=37.73 Aligned_cols=91 Identities=11% Similarity=0.217 Sum_probs=53.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
|+|+|+|.|+.|..++++|.+.. .++++.|.+........+.+.. .++++.. . .++.+ .+.+ ..
T Consensus 10 k~i~viGlG~sG~s~a~~L~~~G---~~V~~~D~~~~~~~~~~~~l~~-------~gi~~~~-g-~~~~~---~~~~-~~ 73 (450)
T PRK02472 10 KKVLVLGLAKSGYAAAKLLHKLG---ANVTVNDGKPFSENPAAQELLE-------EGIKVIC-G-SHPLE---LLDE-NF 73 (450)
T ss_pred CEEEEEEECHHHHHHHHHHHHCC---CEEEEEECCCCCCCHHHHHHHH-------CCCEEEE-C-CCHHH---HCCC-CC
T ss_conf 98999977899999999999886---9899984886657989999996-------7998997-8-88078---6057-88
Q ss_pred CEEE-ECCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 2999-737610032789999862886896
Q gi|254780742|r 83 QIII-NVGSSFLNMSVLRACIDSNVAYID 110 (419)
Q Consensus 83 dvVi-n~~~p~~~~~v~~a~i~~g~hyvD 110 (419)
|+|| +-.-| .+.+.++.+.++|++++.
T Consensus 74 d~vV~SPgI~-~~~p~~~~a~~~~i~v~~ 101 (450)
T PRK02472 74 DLMVKNPGIP-YDNPMVEEALEKGIPIIT 101 (450)
T ss_pred CEEEECCCCC-CCCHHHHHHHHCCCCEEE
T ss_conf 7999899879-999999999986996743
No 412
>pfam07993 NAD_binding_4 Male sterility protein. This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included.
Probab=96.95 E-value=0.0097 Score=37.25 Aligned_cols=82 Identities=18% Similarity=0.168 Sum_probs=54.5
Q ss_pred EECC-CHHHHHHHHHHHHCCCCCCEEEEEECCH---HHHHHHHHHHHHHC---CCCCCCCCEEEEECCC------CHHHH
Q ss_conf 9849-8779999999996089872599963999---99999998734302---4555557308994378------98999
Q gi|254780742|r 7 IIGA-GGVAHVVAHKCAQNNDILGDINIASRTL---QKCSKIIDSIYKKK---SLKIDGKLAIHQVDAL------NIKAV 73 (419)
Q Consensus 7 v~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~---~~~~~~~~~l~~~~---~~~~~~~~~~~~~D~~------d~~~l 73 (419)
|-|| |++|+.+++.|+++... .+|.+--|.. +..+++.+.+.... .....++++++..|+. +.+.+
T Consensus 1 vTGaTGFlG~~ll~~Ll~~~~~-~~V~~LvR~~~~~~~~~r~~~~~~~~~~~~~~~~~~ri~~v~gDl~~~~lGL~~~~~ 79 (245)
T pfam07993 1 LTGATGFLGKVLLEKLLRSCPE-VKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERIIPVAGDLSEPNLGLSDEDF 79 (245)
T ss_pred CCCCHHHHHHHHHHHHHHCCCC-CEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCCCCCCCHHHH
T ss_conf 9384359999999999957999-789999678984058999999998567531010347779995616886579899999
Q ss_pred HHHHHHCCCCEEEECCCC
Q ss_conf 999975397299973761
Q gi|254780742|r 74 VELIKKTNSQIIINVGSS 91 (419)
Q Consensus 74 ~~~~~~~~~dvVin~~~p 91 (419)
.++.+ ++|+||+++..
T Consensus 80 ~~l~~--~vd~IiH~Aa~ 95 (245)
T pfam07993 80 QELAE--EVDVIIHNAAT 95 (245)
T ss_pred HHHHH--CCCEEEECCEE
T ss_conf 99983--59999987433
No 413
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.95 E-value=0.0036 Score=40.12 Aligned_cols=115 Identities=11% Similarity=0.075 Sum_probs=72.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
|+|+|-|.|.||+.++++|.+.. .+++++|-|..++..+.+... .+. ++ .++ ++. ..|
T Consensus 29 k~VaIqG~GnVG~~~A~~l~~~G---akvvv~d~~~~~~~~~~~~~~----------~~~--~~---~~~---~~~-~~~ 86 (200)
T cd01075 29 KTVAVQGLGKVGYKLAEHLLEEG---AKLIVADINEEAVARAAELFG----------ATV--VA---PEE---IYS-VDA 86 (200)
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHCCC----------CEE--EC---CHH---HHC-CCC
T ss_conf 99999898799999999999679---979998268899999985689----------889--37---332---322-777
Q ss_pred CEEEECCCCC-CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHH
Q ss_conf 2999737610-03278999986288689603664200001442000035775108888518869953750111
Q gi|254780742|r 83 QIIINVGSSF-LNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPG 154 (419)
Q Consensus 83 dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PG 154 (419)
||++=|+..- .+... +-.-++.+|-=....+... .+.++...++|+.++|+.=...|
T Consensus 87 DIl~PcA~~~~i~~~~---a~~i~ak~I~e~AN~p~t~------------~~~~~~L~~rgI~~iPD~laNaG 144 (200)
T cd01075 87 DVFAPCALGGVINDDT---IPQLKAKAIAGAANNQLAD------------PRHGQMLHERGILYAPDYVVNAG 144 (200)
T ss_pred CEEEECCCCCCCCHHH---HHHCCCCEEEECCCCCCCC------------HHHHHHHHHCCEEEECHHHEECC
T ss_conf 6886514115468999---9870896997356799999------------78999998599299682442073
No 414
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.92 E-value=0.036 Score=33.42 Aligned_cols=124 Identities=10% Similarity=0.069 Sum_probs=81.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
..|+|.|.|.+|+.+++.|.++. .++++-|.|+++.+...+ .+.++.--|+++.+-|++.=-+ ++
T Consensus 400 ~~VII~G~GRvGq~var~L~~~g---i~~vviD~d~~~V~~~r~-----------~G~~v~yGDat~~~vL~~AGi~-~A 464 (615)
T PRK03562 400 PRVIIAGFGRFGQIVGRLLLSSG---VKMVVLDHDPDHIETLRK-----------FGMKVFYGDATRMDLLESAGAA-KA 464 (615)
T ss_pred CCEEEEECCCCHHHHHHHHHHCC---CCEEEEECCHHHHHHHHH-----------CCCEEEEECCCCHHHHHHCCCC-CC
T ss_conf 99899902804699999999789---987999799999999996-----------7990897689999999867914-06
Q ss_pred CEEEECCCCC-CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHH
Q ss_conf 2999737610-0327899998628868960366420000144200003577510888851886995375011148
Q gi|254780742|r 83 QIIINVGSSF-LNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVV 156 (419)
Q Consensus 83 dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~ 156 (419)
.++|-+.+.. ....+++.|-++--|.-=++--.+. ..-.+-+++|+.-+.-=-++.++-
T Consensus 465 r~vViaidd~~~~~~iv~~~r~~~P~l~IiaRard~---------------~~~~~L~~~Ga~~vv~Et~essL~ 524 (615)
T PRK03562 465 EVLINAIDDPQTNLQLTELVKEHFPHLQIIARARDV---------------DHYIRLRQAGVEKPERETFEGALK 524 (615)
T ss_pred CEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCH---------------HHHHHHHHCCCCEEECCHHHHHHH
T ss_conf 889999498999999999999758998699983977---------------889999978999896665899999
No 415
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.92 E-value=0.0045 Score=39.51 Aligned_cols=146 Identities=13% Similarity=0.148 Sum_probs=79.5
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 31999849-877999999999608987-2599963999999999987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDIL-GDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~-~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-+|-|+|| |.||+..++.|..++... .++++.+-..+..+.+ . .....+.+..+ +.+.+ +
T Consensus 6 ~nVaIvGATG~VG~~li~lL~~h~~f~v~~v~~~aS~~saGk~v--------~-~~~~~~~v~~~---~~~~~----~-- 67 (347)
T PRK06728 6 YHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV--------Q-FKGREIIIQEA---KINSF----E-- 67 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCE--------E-ECCCEEEEEEC---CHHHH----H--
T ss_conf 77999988039999999999727898751079986587799762--------6-89927899857---84465----1--
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHH--HHCCCEEEECCCHHHHHHHH
Q ss_conf 9729997376100327899998628868960366420000144200003577510888--85188699537501114889
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDEC--RTKSITAILGAGFDPGVVNA 158 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a--~~ag~~~i~~~G~~PGl~~l 158 (419)
++|+|+.++|.-.-...+..+.++|+-.||.|.....-. +.+.+- -+.+.+. +.+++.+.|+|-..+-+--+
T Consensus 68 ~~Divf~a~~~~~s~~~~~~~~~~G~~VID~Ssa~R~~~---~vPlvv---PEvN~~~l~~~~~iIanPnC~tt~l~laL 141 (347)
T PRK06728 68 GVDIAFFSAGGEVSRQFVNQAVSSGAIVIDNTSEYRMAH---DVPLVV---PEVNAHTLKEHKGIIAVPNCSALQMVTAL 141 (347)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCEEEECCHHHCCCC---CCCEEC---CCCCHHHHHCCCCEEECCCHHHHHHHHHH
T ss_conf 697899768578899999999858969998975656899---974588---75296676232783778980888999999
Q ss_pred HHHHHHHHHCCCCCEEEE
Q ss_conf 999999974366638976
Q gi|254780742|r 159 FARLAQDEYFDKITDIDI 176 (419)
Q Consensus 159 la~~~~~~~~d~~~~i~~ 176 (419)
.. ..+.+ .++.|.+
T Consensus 142 ~P---L~~~~-~i~~v~v 155 (347)
T PRK06728 142 QP---IRKVF-GLERIIV 155 (347)
T ss_pred HH---HHHHH-CCCEEEE
T ss_conf 99---99853-7661235
No 416
>PRK09117 consensus
Probab=96.90 E-value=0.0034 Score=40.30 Aligned_cols=44 Identities=23% Similarity=0.338 Sum_probs=36.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHH
Q ss_conf 31999849877999999999608987259996399999999998734
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIY 49 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~ 49 (419)
|+|-|+|||.||+.++..++.+. .++++.|++.+.+++..+.+.
T Consensus 3 ~~VaViGaG~mG~~iA~~~a~~G---~~V~l~D~~~~~l~~~~~~i~ 46 (282)
T PRK09117 3 QTVGIIGAGTMGNGIAQACAVAG---LDVVMVDISDAAVQRGLATVA 46 (282)
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHHHH
T ss_conf 77999897799999999999679---968999898899999999999
No 417
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.89 E-value=0.0028 Score=40.85 Aligned_cols=46 Identities=26% Similarity=0.364 Sum_probs=37.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 7319998498779999999996089872599963999999999987343
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYK 50 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~ 50 (419)
-|+|-|+|||.||+.+|..++.+. .++++.|++++.+++..+.+..
T Consensus 4 ik~VaViGAG~MG~giA~~~a~~G---~~V~l~D~~~e~~~~~~~~i~~ 49 (292)
T PRK07530 4 IKKVGVIGAGQMGNGIAHVCALAG---YDVLLNDVSADRLESGMATING 49 (292)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHHHHH
T ss_conf 888999896699999999999679---9689997988999999999999
No 418
>pfam02629 CoA_binding CoA binding domain. This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases.
Probab=96.89 E-value=0.0037 Score=40.06 Aligned_cols=88 Identities=18% Similarity=0.194 Sum_probs=64.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
..+|+++|+|+.|+..++..-+.... .-..+.|.|+++.-+ ++ ..+++. +++.+++++++
T Consensus 3 ~~~v~liG~g~lG~al~~~~~~~~~~-~i~~vfdv~p~~~G~---~i---------~gipv~-------~~l~~~~~~~~ 62 (96)
T pfam02629 3 DTKVAVIGASGLGIQGLYHFIQLLGY-GIKMVFGVNPRKGGT---EV---------GGIPVY-------KSVDELEEDTG 62 (96)
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHCC-CEEEEEECCCCCCCC---EE---------CCEEEE-------CCHHHHHHCCC
T ss_conf 77499999898278887768877148-618998069242775---88---------899843-------10877741558
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 7299973761003278999986288689
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
+|+.|-++|+.....++..|+++|+.-+
T Consensus 63 idiaii~VP~~~a~~~~~~~v~~GIk~i 90 (96)
T pfam02629 63 VDVAVITVPAPFAQEAIDELVDAGIKGI 90 (96)
T ss_pred CCEEEEEECHHHHHHHHHHHHHCCCCEE
T ss_conf 8789999478998999999998699899
No 419
>PRK12464 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=96.88 E-value=0.019 Score=35.21 Aligned_cols=136 Identities=10% Similarity=0.133 Sum_probs=86.2
Q ss_pred EECC-CHHHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHHHHCCCCCCC--------CCEE----EEECCCCHHH
Q ss_conf 9849-877999999999608987-259996399999999998734302455555--------7308----9943789899
Q gi|254780742|r 7 IIGA-GGVAHVVAHKCAQNNDIL-GDINIASRTLQKCSKIIDSIYKKKSLKIDG--------KLAI----HQVDALNIKA 72 (419)
Q Consensus 7 v~Ga-G~vG~~~~~~L~~~~~~~-~~i~va~r~~~~~~~~~~~l~~~~~~~~~~--------~~~~----~~~D~~d~~~ 72 (419)
|+|+ |.+|+.+...+.++++.+ .....|++|.+++.+.+.++.-..-...+. .+.. .++ ....+.
T Consensus 1 ILGSTGSIG~~tL~Vi~~~~~~f~V~~Lsa~~n~~~L~~q~~~f~Pk~v~i~d~~~~~~lk~~l~~~~~~~~v-~~G~~~ 79 (392)
T PRK12464 1 ILGSTGSIGTSTLDVVAAHPERFKVVALTANYNIELLVQQIKRFQPRVVSVADAELADTLRARLSAAGSNTKI-TYGTDG 79 (392)
T ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCEE-EECHHH
T ss_conf 9595759899999999948687089999938879999999999499999994889999999986406888379-868899
Q ss_pred HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHH
Q ss_conf 99999753972999737610032789999862886896036642000014420000357751088885188699537501
Q gi|254780742|r 73 VVELIKKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFD 152 (419)
Q Consensus 73 l~~~~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~ 152 (419)
|.++++..++|+||++.-.+.+..-.-+++++|.... ++.-++-+.. .. -+-+.+++.+..++| +|
T Consensus 80 l~~~~~~~~~D~vv~Ai~G~aGL~pt~~ai~~gk~ia-LANKEslV~a--------G~--li~~~~k~~~~~IiP---VD 145 (392)
T PRK12464 80 LIDVATHDGSDLVVSSIVGVAGLLPTLAALKAGKDIA-LANKETLVAA--------GH--IVTDLAKQNGCRLLP---VD 145 (392)
T ss_pred HHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EECCHHHHHC--------CH--HHHHHHHHCCCEEEE---CC
T ss_conf 9999707788989994453534699999997499078-7051588737--------79--999999862985742---36
Q ss_pred HHHHH
Q ss_conf 11488
Q gi|254780742|r 153 PGVVN 157 (419)
Q Consensus 153 PGl~~ 157 (419)
+=-+.
T Consensus 146 SEHsA 150 (392)
T PRK12464 146 SEHSA 150 (392)
T ss_pred CHHHH
T ss_conf 05789
No 420
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.88 E-value=0.0046 Score=39.41 Aligned_cols=73 Identities=15% Similarity=0.221 Sum_probs=55.7
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 1999849-877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+|||.|+ |.+|+.+++.|.+.. .++...+|...+..... ...+....|+.|.+...+.+...+
T Consensus 2 ~iLVtG~tGfiG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~- 65 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAG---HDVRGLDRLRDGLDPLL------------SGVEFVVLDLTDRDLVDELAKGVP- 65 (314)
T ss_pred EEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCCCCCCC------------CCCCEEECCCCCHHHHHHHHCCCC-
T ss_conf 69999288777999999998589---97999917875431124------------676434225335678998854588-
Q ss_pred CEEEECCCCC
Q ss_conf 2999737610
Q gi|254780742|r 83 QIIINVGSSF 92 (419)
Q Consensus 83 dvVin~~~p~ 92 (419)
|+||+++...
T Consensus 66 d~vih~aa~~ 75 (314)
T COG0451 66 DAVIHLAAQS 75 (314)
T ss_pred CEEEECCCCC
T ss_conf 7899888646
No 421
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.87 E-value=0.0045 Score=39.52 Aligned_cols=77 Identities=16% Similarity=0.141 Sum_probs=52.3
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE
Q ss_conf 99984987799999999960898725999639999999999873430245555573089943789899999997539729
Q gi|254780742|r 5 VLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQI 84 (419)
Q Consensus 5 ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dv 84 (419)
|.|+|+|.||+.+++.|+.+ +.. ++++-|+++++++..+..|....+... ....+. -..|.+. ++ ++|+
T Consensus 1 V~IIGaG~VG~~~a~~l~~~-~~~-el~L~D~~~~~a~g~a~DL~~~~~~~~-~~~~v~--~~~d~~~----~~--daDv 69 (300)
T cd01339 1 ISIIGAGNVGATLAQLLALK-ELG-DVVLLDIVEGLPQGKALDISQAAPILG-SDTKVT--GTNDYED----IA--GSDV 69 (300)
T ss_pred CEEECCCHHHHHHHHHHHHC-CCC-EEEEECCCCCHHHHHHHHHHHHHHCCC-CCCEEE--ECCCHHH----HC--CCCE
T ss_conf 98989688899999999857-996-799980999800579887761320158-985899--4788799----47--9989
Q ss_pred EEECCCCC
Q ss_conf 99737610
Q gi|254780742|r 85 IINVGSSF 92 (419)
Q Consensus 85 Vin~~~p~ 92 (419)
||.++|..
T Consensus 70 vVitaG~~ 77 (300)
T cd01339 70 VVITAGIP 77 (300)
T ss_pred EEEECCCC
T ss_conf 99906778
No 422
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.86 E-value=0.0024 Score=41.37 Aligned_cols=45 Identities=18% Similarity=0.239 Sum_probs=36.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHH
Q ss_conf 731999849877999999999608987259996399999999998734
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIY 49 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~ 49 (419)
-|+|-|+|||.||+.+|..++.+. .++++.|++.+.+++..+.+.
T Consensus 3 Ik~VaViGaG~MG~gIA~~~a~~G---~~V~l~D~~~~~l~~a~~~i~ 47 (291)
T PRK06035 3 IKVIGVVGSGVMGQGIAQVFARTG---YDVTIVDVSEEILKNAMELIE 47 (291)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHHHH
T ss_conf 588999887688999999999589---988999899899999999999
No 423
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=96.85 E-value=0.013 Score=36.40 Aligned_cols=134 Identities=12% Similarity=0.068 Sum_probs=79.2
Q ss_pred EEEEECCCHH--HHHHHHHHHHCCC-CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 1999849877--9999999996089-872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 4 NVLIIGAGGV--AHVVAHKCAQNND-ILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 4 ~ilv~GaG~v--G~~~~~~L~~~~~-~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
||.++|+|.+ ...++..|++..+ ...+|++.|.|.+|++.+.+-... ........+++.. ...+++.++
T Consensus 2 KI~iIGgGS~~ftp~li~~l~~~~~l~~~ei~L~Did~erl~~v~~l~~~-~~~~~~~~~~v~~-----Ttd~~eAl~-- 73 (423)
T cd05297 2 KIAFIGAGSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKK-IVEELGAPLKIEA-----TTDRREALD-- 73 (423)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH-HHHHHCCCEEEEE-----ECCHHHHHC--
T ss_conf 79999986487599999999608457899899988999999999999999-9985199818999-----689999846--
Q ss_pred CCCEEEECCCCC-CC--HHHHHHHHHCCCCEE--EECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 972999737610-03--278999986288689--60366420000144200003577510888851886995
Q gi|254780742|r 81 NSQIIINVGSSF-LN--MSVLRACIDSNVAYI--DTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAIL 147 (419)
Q Consensus 81 ~~dvVin~~~p~-~~--~~v~~a~i~~g~hyv--D~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~ 147 (419)
++|.|+|+.-.- +. ..=-+.++++|..=. +++|-......+.+-+.+-+......+.+ -++.+++
T Consensus 74 gADfV~~~irvGg~~~r~~De~Iplk~Gv~~~vGET~G~GG~~~alRtIPv~leia~~i~e~~--P~AwiiN 143 (423)
T cd05297 74 GADFVINTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELC--PDAWLLN 143 (423)
T ss_pred CCCEEEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHC--CCCEEEE
T ss_conf 899999987746824889888489883966044565477589998622899999999999879--9838997
No 424
>pfam02737 3HCDH_N 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. This family also includes lambda crystallin.
Probab=96.84 E-value=0.0051 Score=39.13 Aligned_cols=44 Identities=23% Similarity=0.257 Sum_probs=36.7
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 19998498779999999996089872599963999999999987343
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYK 50 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~ 50 (419)
+|-|+|||.||+.+|..++.+. .++++.|++.+.+++..+.+..
T Consensus 1 kV~ViGaG~mG~~iA~~~a~~G---~~V~l~D~~~~~l~~~~~~i~~ 44 (180)
T pfam02737 1 KVAVIGAGTMGAGIAQVFARAG---LEVVLVDISEEALEKARARIEK 44 (180)
T ss_pred CEEEECCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHH
T ss_conf 9899997889999999999679---9399997998999999999999
No 425
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.84 E-value=0.0021 Score=41.70 Aligned_cols=45 Identities=16% Similarity=0.118 Sum_probs=37.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 319998498779999999996089872599963999999999987343
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYK 50 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~ 50 (419)
++|-|+|||.||+.++..++.+. .++++.|++++.+++..+.+.+
T Consensus 3 ~~VaViGaG~mG~giA~~~a~~G---~~V~l~D~~~~~l~~a~~~i~~ 47 (308)
T PRK06129 3 GSIAIVGAGLIGRAWAIVFARAG---HRVRLWDADPAALAAAPAYIAG 47 (308)
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHHHHH
T ss_conf 87999777899999999998589---9389998988999999999999
No 426
>PRK06545 prephenate dehydrogenase; Validated
Probab=96.83 E-value=0.021 Score=34.97 Aligned_cols=91 Identities=14% Similarity=0.078 Sum_probs=54.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
|+|+|+|.|.+|..++..|.+.+. ..+++-.|++.+.++...+ .+. +... ..++.+.++ ++
T Consensus 1 k~V~IiGlGLIGgSlalalk~~g~-~~~i~~~d~~~~~l~~A~~-~g~---------id~~------~~~~~~~~~--~~ 61 (357)
T PRK06545 1 KTVLIVGLGLIGGSLALAIKAAGP-DVFIIGYDPSGAQLARALG-FGV---------IDEL------AEDLARAAA--EA 61 (357)
T ss_pred CEEEEEEECHHHHHHHHHHHHCCC-CEEEEEECCCHHHHHHHHH-CCC---------CCEE------CCCHHHHCC--CC
T ss_conf 979999778789999999985499-7699996699999999986-899---------7730------488767156--79
Q ss_pred CEEEECCCCCCCHHHHHHHHH--CCCCEEEEC
Q ss_conf 299973761003278999986--288689603
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACID--SNVAYIDTA 112 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~--~g~hyvD~s 112 (419)
|+||-|+|+..-..+++.... .++-+.|++
T Consensus 62 DlVvlatPv~~~~~~l~~l~~l~~~~ivTDVg 93 (357)
T PRK06545 62 DLIVLAVPVDATAALLAELADLAPGVIVTDVG 93 (357)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 99999499999999999987238997899751
No 427
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=96.83 E-value=0.022 Score=34.85 Aligned_cols=107 Identities=14% Similarity=0.180 Sum_probs=70.2
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH-------HCCCCCCCCCEEEEECCC---C--HH
Q ss_conf 19998498779999999996089872599963999999999987343-------024555557308994378---9--89
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYK-------KKSLKIDGKLAIHQVDAL---N--IK 71 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~D~~---d--~~ 71 (419)
+|-++|.|.||..+++.|..+.. +++.-|+|++.-+.+++.-.. .......||+-..-+-+. + .+
T Consensus 2 ~iGmiGLGrMG~n~v~rl~~~gh---dvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~vi~ 78 (300)
T COG1023 2 QIGMIGLGRMGANLVRRLLDGGH---DVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDAVID 78 (300)
T ss_pred CCEEECCCHHHHHHHHHHHHCCC---EEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHH
T ss_conf 01154000526999999983897---289973888999999865775436799999746987479997337773689999
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCHHH--HHHHHHCCCCEEEECCCC
Q ss_conf 99999975397299973761003278--999986288689603664
Q gi|254780742|r 72 AVVELIKKTNSQIIINVGSSFLNMSV--LRACIDSNVAYIDTAIHE 115 (419)
Q Consensus 72 ~l~~~~~~~~~dvVin~~~p~~~~~v--~~a~i~~g~hyvD~s~~~ 115 (419)
.|+.+++ ..|+||..-..+|+..+ .+..-+.|+||+|..-..
T Consensus 79 ~la~~L~--~GDivIDGGNS~y~Ds~rr~~~l~~kgi~flD~GTSG 122 (300)
T COG1023 79 DLAPLLS--AGDIVIDGGNSNYKDSLRRAKLLAEKGIHFLDVGTSG 122 (300)
T ss_pred HHHHHCC--CCCEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf 9885367--8888987886325778999998876597178346777
No 428
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.82 E-value=0.0039 Score=39.89 Aligned_cols=45 Identities=24% Similarity=0.330 Sum_probs=37.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 319998498779999999996089872599963999999999987343
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYK 50 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~ 50 (419)
|+|-|+|||.||+.+|..++.+. .++++.|++.+.+++..+.+..
T Consensus 3 ~kV~ViGaG~mG~~IA~~~a~~G---~~V~l~D~~~~~~~~~~~~i~~ 47 (284)
T PRK07819 3 QRVGVVGAGQMGSGIAEVCARAG---VDVLVFETTEEAATAGRNRIEK 47 (284)
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHH
T ss_conf 67999897789999999999579---9089997988999999999999
No 429
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.81 E-value=0.02 Score=35.12 Aligned_cols=90 Identities=14% Similarity=0.180 Sum_probs=66.6
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
.|+|.|.|.+|+.+++.|.++. .++++-|.|+++.+.+.+ .+.++.--|+++++-|++.=-+ ++.
T Consensus 402 ~VII~G~GR~Gq~var~L~~~g---i~~vviD~d~~~V~~~r~-----------~G~~v~yGDat~~~vL~~AGi~-~A~ 466 (602)
T PRK03659 402 QVIIVGFGRFGQVIGRLLMANK---MRITVLERDISAVNLMRK-----------YGYKVYYGDATQLELLRAAGAE-KAE 466 (602)
T ss_pred CEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHH-----------CCCEEEEECCCCHHHHHHCCCC-CCC
T ss_conf 9899788756899999999789---998999786799999997-----------8990897589999999867904-058
Q ss_pred EEEECCCCC-CCHHHHHHHHHCCCCE
Q ss_conf 999737610-0327899998628868
Q gi|254780742|r 84 IIINVGSSF-LNMSVLRACIDSNVAY 108 (419)
Q Consensus 84 vVin~~~p~-~~~~v~~a~i~~g~hy 108 (419)
++|-+.+.. ....+++.|-++--|.
T Consensus 467 ~vViai~d~~~~~~iv~~~r~~~P~l 492 (602)
T PRK03659 467 AIVITCNEPEDTMKLVELCQQHFPHL 492 (602)
T ss_pred EEEEEECCHHHHHHHHHHHHHHCCCC
T ss_conf 89998298999999999999878699
No 430
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.80 E-value=0.0074 Score=38.02 Aligned_cols=77 Identities=10% Similarity=0.163 Sum_probs=48.3
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 1999849-877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
||.|+|| |.||+.+++.|..+.- ..++++-|.+..+.+++ .|.. .....++.... ....+.+.++ ++
T Consensus 2 KV~IIGA~G~VG~~~A~~l~~~~~-~~elvLiDi~~~~g~a~--DL~h---~~~~~~v~~~~----~~~~~~~~l~--da 69 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPL-VSELALYDIVNTPGVAA--DLSH---INTPAKVTGYL----GPEELKKALK--GA 69 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC-CCEEEEEECCCCHHHHH--HHHC---CCCCCCEEEEE----CCCCHHHHHC--CC
T ss_conf 899999998189999999972999-77699982774266755--3216---56568512570----8874667747--99
Q ss_pred CEEEECCCCC
Q ss_conf 2999737610
Q gi|254780742|r 83 QIIINVGSSF 92 (419)
Q Consensus 83 dvVin~~~p~ 92 (419)
|+||.++|..
T Consensus 70 DiVVitAG~~ 79 (310)
T cd01337 70 DVVVIPAGVP 79 (310)
T ss_pred CEEEECCCCC
T ss_conf 9999878988
No 431
>PRK09422 alcohol dehydrogenase; Provisional
Probab=96.80 E-value=0.038 Score=33.22 Aligned_cols=35 Identities=9% Similarity=0.071 Sum_probs=14.8
Q ss_pred HHHHHHHCCCCCCC-CCCCHHHCCHHHHHHHHHHCCCE
Q ss_conf 99999987998778-62077885948999999967980
Q gi|254780742|r 362 ATAILIAQGIWDIG-KMVNIEELPPKPFLGTLQRMGLA 398 (419)
Q Consensus 362 ~aa~lil~g~i~~~-GV~~Pe~~~~~~fl~~L~~~Gi~ 398 (419)
.+.+++.+|+++.- ..++.|. ...-++.|++.-..
T Consensus 294 ~~~~l~~~g~i~p~i~~~pl~~--~~eA~~~l~~g~~~ 329 (338)
T PRK09422 294 EAFQFGAEGKVVPKVQLRPLED--INDIFDEMEEGKIQ 329 (338)
T ss_pred HHHHHHHCCCCEEEEEEEEHHH--HHHHHHHHHCCCCC
T ss_conf 9999998699857799983899--99999999769981
No 432
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.76 E-value=0.0041 Score=39.76 Aligned_cols=45 Identities=11% Similarity=0.082 Sum_probs=36.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 319998498779999999996089872599963999999999987343
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYK 50 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~ 50 (419)
|+|-|+|||-||+.++..++.+. .++++.|.+++..+++.+.+.+
T Consensus 8 k~VaVIGaG~MG~giAa~~a~~G---~~V~l~D~~~~a~~~~~~~i~~ 52 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHG---LDVVAWDPAPGAEAALRANVAN 52 (321)
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHH
T ss_conf 87999888788899999999479---8599996988899999999999
No 433
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.76 E-value=0.017 Score=35.61 Aligned_cols=89 Identities=15% Similarity=0.127 Sum_probs=51.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHH--HHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 73199984987799999999960898725999639999--9999998734302455555730899437898999999975
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQ--KCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
.|+|+|+|.|+.|..++++|.++. .++++.|.++. ++..+.+.+ +.+.+..-. ..+. +..
T Consensus 5 ~k~v~viGlG~sG~s~a~~L~~~G---~~v~~~D~~~~~~~~~~~~~~~---------~~i~~~~g~--~~~~---~~~- 66 (445)
T PRK04308 5 NKKILVAGLGGTGISMIAYLRKNG---AEVAAYDAELKAERVAQIGKMF---------DGLVFYTGR--LKDA---LDN- 66 (445)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCC---CEEEEEECCCCCCHHHHHHHCC---------CCCEEEECC--CHHH---HCC-
T ss_conf 998999998999999999999789---9199997999953189997436---------996899378--6365---015-
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 397299973761003278999986288689
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
++|+||-.-|=..+.+.++.|.++|++++
T Consensus 67 -~~d~vV~SPgI~~~~p~l~~a~~~gi~i~ 95 (445)
T PRK04308 67 -GFDILALSPGISERQPDIEAFKQNGGRVL 95 (445)
T ss_pred -CCCEEEECCCCCCCCHHHHHHHHCCCCEE
T ss_conf -99999989953899999999997599571
No 434
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.74 E-value=0.018 Score=35.44 Aligned_cols=91 Identities=8% Similarity=0.063 Sum_probs=51.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEE-CCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 7319998498779999999996089872599963-999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIAS-RTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~-r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|+|+|+|.|..|..++++|.+... ++++.| ++..........+... .+++..- .+.+. +..
T Consensus 14 gk~v~V~GlG~sG~s~a~~L~~~G~---~v~~~D~~~~~~~~~~~~~l~~~-------g~~~~~g--~~~~~---~~~-- 76 (481)
T PRK01438 14 GLRVVVAGLGVSGFPAADALHELGA---SVTVVADGDDDRSRERAALLEVL-------GATVRLG--DGETT---LPE-- 76 (481)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCC---EEEEEECCCCCCCHHHHHHHHHC-------CCEEEEC--CCHHH---HHC--
T ss_conf 9989999575889999999996799---89999799874486899988854-------9889968--87566---624--
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 97299973761003278999986288689
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
++|+||-.-|-..+.++++.+.+.|++.+
T Consensus 77 ~~d~vV~SPGI~~~~p~~~~a~~~gi~i~ 105 (481)
T PRK01438 77 GTELVVTSPGWRPTHPLLAAAAEAGIPVW 105 (481)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHCCCCEE
T ss_conf 89999989978998999999998699386
No 435
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase; InterPro: IPR011548 3-hydroxyisobutyrate dehydrogenase is an enzyme that catalyzes the NAD+-dependent oxidation of 3-hydroxyisobutyrate to methylmalonate semialdehyde of the valine catabolism pathway. In Pseudomonas aeruginosa, 3-hydroxyisobutyrate dehydrogenase (mmsB) is co-induced with methylmalonate-semialdehyde dehydrogenase (mmsA) when grown on medium containing valine as the sole carbon source. The positive transcriptional regulator of this operon (mmsR) is located upstream of these genes and has been identified as a member of the XylS/AraC family of transcriptional regulators . 3-hydroxyisobutyrate dehydrogenase shares high sequence homology to the characterised 3-hydroxyisobutyrate dehydrogenase from rat liver with conservation of proposed NAD+ binding residues at the N-terminus (G-8,10,13,24 and D-31). This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate . HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase. ; GO: 0008442 3-hydroxyisobutyrate dehydrogenase activity, 0051287 NAD binding.
Probab=96.72 E-value=0.0087 Score=37.56 Aligned_cols=115 Identities=12% Similarity=0.171 Sum_probs=81.7
Q ss_pred EECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEE
Q ss_conf 98498779999999996089872599963999999999987343024555557308994378989999999753972999
Q gi|254780742|r 7 IIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQIII 86 (419)
Q Consensus 7 v~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dvVi 86 (419)
.||-|.||.++|+.|+++.+ ++-+=|-+++.++++++.= .+. .++-.+.+. ++|+||
T Consensus 1 FIGLGNMGgPMA~NL~KAGH---~v~~FDL~p~av~~~v~aG-----------~~~-------A~S~~~a~~--~Ad~vI 57 (290)
T TIGR01692 1 FIGLGNMGGPMAANLLKAGH---AVRVFDLSPKAVEELVEAG-----------AQA-------AASAAEAAE--GADVVI 57 (290)
T ss_pred CCCCCCCCHHHHHHHHHHCC---EEEEEECCHHHHHHHHHCC-----------HHC-------CCCHHHHHC--CCCEEE
T ss_conf 97888882279999861187---2577517889999999600-----------220-------545798845--588686
Q ss_pred ECCCCCCCH-HHH------HHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
Q ss_conf 737610032-789------99986288689603664200001442000035775108888518869953750111488
Q gi|254780742|r 87 NVGSSFLNM-SVL------RACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVN 157 (419)
Q Consensus 87 n~~~p~~~~-~v~------~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ 157 (419)
+.+|.-.|- .|. -+=+..+.-.||-|--++... .+++++|.+.|.+++ ++=++.|+-.
T Consensus 58 TMLPAg~HV~sVY~gd~gIL~~~~K~~LlIDcSTIDpdsA------------r~~A~~Aa~~G~~f~-DAPVSGG~Gg 122 (290)
T TIGR01692 58 TMLPAGKHVISVYSGDDGILAKVAKGSLLIDCSTIDPDSA------------RKVAELAAAHGLVFV-DAPVSGGVGG 122 (290)
T ss_pred ECCCCCHHHHHHHHCCHHHHCCCCCCCCEEECCCCCHHHH------------HHHHHHHHHCCCCEE-CCCCCCCHHH
T ss_conf 3488603489998331334113678896332456786789------------999999998187210-3677753565
No 436
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=96.72 E-value=0.0064 Score=38.46 Aligned_cols=98 Identities=16% Similarity=0.117 Sum_probs=56.5
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 1999849-877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+|-|+|| |.||+..++.|.+|+........+.+ .+..+.+.+..+... ......++..+.+ . .++
T Consensus 1 kVaIvGatGyvG~eli~lL~~hp~~~~~~l~as~-~~~G~~i~~~~~~l~------~~~~~~~~~~~~~---~----~~~ 66 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASA-RSAGKRVSEAGPHLK------GEVVLELEPEDFE---E----LAV 66 (122)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEC-CCCCCCHHHHCCCCC------CCCCCEECCCCCC---C----CCC
T ss_conf 9899894519999999999858997457777404-658975788596645------7735056533110---0----179
Q ss_pred CEEEECCCCCCCHHHH---HHHHHCCCCEEEECCCC
Q ss_conf 2999737610032789---99986288689603664
Q gi|254780742|r 83 QIIINVGSSFLNMSVL---RACIDSNVAYIDTAIHE 115 (419)
Q Consensus 83 dvVin~~~p~~~~~v~---~a~i~~g~hyvD~s~~~ 115 (419)
|+|+.|+|.-....++ ...+++|+-.||+|.+.
T Consensus 67 Dvvf~a~p~~~s~~~~~~~~~~~~~g~~VIDlSadf 102 (122)
T smart00859 67 DIVFLALPHGVSKEIAPLLPKAAEAGVKVIDLSSAF 102 (122)
T ss_pred CEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCHHH
T ss_conf 999993882788999998898875698798684775
No 437
>pfam02056 Glyco_hydro_4 Family 4 glycosyl hydrolase.
Probab=96.72 E-value=0.032 Score=33.74 Aligned_cols=158 Identities=9% Similarity=0.092 Sum_probs=90.1
Q ss_pred EEEEECCCH--HHHHHHHHHHHCCCC-CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 199984987--799999999960898-72599963999999999987343024555557308994378989999999753
Q gi|254780742|r 4 NVLIIGAGG--VAHVVAHKCAQNNDI-LGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 4 ~ilv~GaG~--vG~~~~~~L~~~~~~-~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
||.++|||+ +...+...+.+..+. ..++++.|.|++|++.+.+-.. +........+++.. ..++++.++
T Consensus 1 KI~iIGaGS~~~~~~~~~d~~~~~~l~~~ei~L~DId~~rL~~~~~l~~-~~~~~~~~~~~v~~-----ttd~~eAl~-- 72 (183)
T pfam02056 1 KIVIIGGGSTITPKNLLGDLDHTEELPGRELALYDIDEERLDAIQTACK-KLVDEAGPDIKFEK-----TTDRKEALT-- 72 (183)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHH-HHHHHCCCCEEEEE-----ECCHHHHHC--
T ss_conf 9899998544439999999960856898999997799999999999999-99996199839999-----789999966--
Q ss_pred CCCEEEECCCCC-CCH--HHHHHHHHCCCCE--EEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHH
Q ss_conf 972999737610-032--7899998628868--96036642000014420000357751088885188699537501114
Q gi|254780742|r 81 NSQIIINVGSSF-LNM--SVLRACIDSNVAY--IDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGV 155 (419)
Q Consensus 81 ~~dvVin~~~p~-~~~--~v~~a~i~~g~hy--vD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl 155 (419)
++|.|||+.-.- +.. .=.+..+++|+.= -|+++-....+.+.+-+.+-+......+.+ -++.+++=. =|
T Consensus 73 gADfVi~~irvG~~~~r~~De~Iplk~Gv~~~~~eT~G~GG~~~alRtip~~l~ia~~i~e~~--P~AwliNyt----NP 146 (183)
T pfam02056 73 DADFVINAIRVGLLPARELDEKIPLRHGVVGTIQETVGPGGIFRGLRTIPVFFDIAKDIEELC--PDAWVLNYT----NP 146 (183)
T ss_pred CCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHC--CCCEEEECC----CH
T ss_conf 899999986407714888777679983965323324572288877601899999999999979--983899827----88
Q ss_pred HHHHHHHHHHHHCCCCCEEEE
Q ss_conf 889999999974366638976
Q gi|254780742|r 156 VNAFARLAQDEYFDKITDIDI 176 (419)
Q Consensus 156 ~~lla~~~~~~~~d~~~~i~~ 176 (419)
..+.+.. +.+.+..+..+.+
T Consensus 147 ~~~vt~a-l~r~~~~~k~vGl 166 (183)
T pfam02056 147 AAMVTEA-VYRRYPNIKAVGL 166 (183)
T ss_pred HHHHHHH-HHHHCCCCCEEEE
T ss_conf 8999999-9985899988996
No 438
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=96.69 E-value=0.015 Score=35.98 Aligned_cols=122 Identities=10% Similarity=0.102 Sum_probs=74.0
Q ss_pred EEEEECCCHH-HHHHHHHHHHCCC--CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 1999849877-9999999996089--872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 4 NVLIIGAGGV-AHVVAHKCAQNND--ILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 4 ~ilv~GaG~v-G~~~~~~L~~~~~--~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
||.++|||++ ...++..|.++.+ ...+|++.|.|++|++.+.+-.... .......+++.. ...+++.++
T Consensus 2 KI~iIGaGS~~t~~lv~~l~~~~~~l~~~ei~L~DId~erL~~~~~~a~~~-~~~~~~~~~v~~-----ttd~~eAl~-- 73 (425)
T cd05197 2 KIAIIGGGSSFTPELVSGLLKTPEELPISEVTLYDIDEERLDIILTIAKRY-VEEVGADIKFEK-----TMDLEDAII-- 73 (425)
T ss_pred EEEEECCCHHHHHHHHHHHHHCHHHCCCCEEEEECCCHHHHHHHHHHHHHH-HHHHCCCEEEEE-----ECCHHHHHC--
T ss_conf 799989836878999999983843378898999889999999999999999-996199838999-----789999856--
Q ss_pred CCCEEEECCCCC-CCH--HHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHH
Q ss_conf 972999737610-032--78999986288689603664200001442000035775
Q gi|254780742|r 81 NSQIIINVGSSF-LNM--SVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWS 133 (419)
Q Consensus 81 ~~dvVin~~~p~-~~~--~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~ 133 (419)
++|.|||+.-+- +.. .=.+.++++|+=.=|++|-....+.+.+-|.+.+....
T Consensus 74 gADfVi~~irvGg~~~r~~De~IplkyGv~gqeT~G~GG~~~alRtIPv~l~ia~~ 129 (425)
T cd05197 74 DADFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARK 129 (425)
T ss_pred CCCEEEEEEEECCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999998875670578999868987591444377788999998429999999999
No 439
>pfam02844 GARS_N Phosphoribosylglycinamide synthetase, N domain. Phosphoribosylglycinamide synthetase catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by Phosphoribosylglycinamide synthetase is the ATP- dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide. This domain is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (see pfam00289).
Probab=96.68 E-value=0.031 Score=33.79 Aligned_cols=89 Identities=19% Similarity=0.330 Sum_probs=65.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
||||+|.|+=-.++++.|.+.... .++.++--|..-.+ + .+...+|..|.+.+.+++++.+.|
T Consensus 1 kILvIGsGgREHAi~~~l~~s~~~-~~l~~~pgN~gi~~-~---------------~~~~~i~~~d~~~i~~~~~~~~id 63 (99)
T pfam02844 1 KVLVVGSGGREHALAWKLAQSPRV-EKVYVAPGNPGTAQ-L---------------AKNVNIDITDFEALADFAKEENID 63 (99)
T ss_pred CEEEECCCHHHHHHHHHHHCCCCC-CEEEEECCCCHHHH-H---------------CEEECCCCCCHHHHHHHHHHCCCC
T ss_conf 989987887999999999649997-76999589815777-4---------------750145844799999999981974
Q ss_pred EEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 99973761003278999986288689
Q gi|254780742|r 84 IIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 84 vVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
+||-.-..++...++..+.++|...+
T Consensus 64 lviiGPE~pL~~Gl~D~l~~~gi~vf 89 (99)
T pfam02844 64 LVVVGPEAPLVAGIVDALRAAGIPVF 89 (99)
T ss_pred EEEECCCHHHHHHHHHHHHHCCCEEE
T ss_conf 99989606778788999986899179
No 440
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=96.67 E-value=0.016 Score=35.75 Aligned_cols=84 Identities=15% Similarity=0.248 Sum_probs=50.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC-CHHHHHHHHHHCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378-98999999975397
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDAL-NIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~-d~~~l~~~~~~~~~ 82 (419)
||+|+|+|.||+..+..|++.. . ++++.+|+.+..+++.+.=-... .........+.+. +++. .. .+
T Consensus 2 kI~IiGaGaiG~~~a~~L~~ag-~--~V~li~r~~~~~~~i~~~Gl~i~---~~~~~~~~~~~~~~~~~~----~~--~~ 69 (307)
T PRK06522 2 KIAILGAGAIGGLFGARLAQAG-H--DVTLVARGATLAEALNENGLRLL---EGGEVFVVPVPAADDPAE----LG--PQ 69 (307)
T ss_pred EEEEECCCHHHHHHHHHHHHCC-C--CEEEEECCHHHHHHHHHCCEEEE---CCCCEEECCCCCCCCHHH----CC--CC
T ss_conf 8999991499999999998489-9--88999788889999996893995---289769805503488667----48--98
Q ss_pred CEEEECCCCCCCHHHHH
Q ss_conf 29997376100327899
Q gi|254780742|r 83 QIIINVGSSFLNMSVLR 99 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~ 99 (419)
|+||-|+-.+....+++
T Consensus 70 D~iiv~vKs~~~~~a~~ 86 (307)
T PRK06522 70 DLVILAVKAYQLPAALP 86 (307)
T ss_pred CEEEEECCCCCHHHHHH
T ss_conf 88999806668999999
No 441
>PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.64 E-value=0.017 Score=35.61 Aligned_cols=89 Identities=19% Similarity=0.206 Sum_probs=52.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
-|+|+|+|.|..|..++++|.++. .++.+.|.+.+.. ..+.+.. .++.. +.-.+.+. +. .
T Consensus 6 ~k~v~V~GlG~sG~s~~~~L~~~G---~~v~~~D~~~~~~--~~~~l~~--------~~~~~-~g~~~~~~----~~--~ 65 (438)
T PRK03806 6 GKNVVIIGLGLTGLSCVDFFLARG---VTPRVMDTRMTPP--GLDKLPE--------NVERH-TGSLNDEW----LL--A 65 (438)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCC---CEEEEEECCCCCH--HHHHHHC--------CCCEE-ECCCCHHH----HC--C
T ss_conf 998999945788899999999789---9699998999900--5788645--------88466-57779668----06--7
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 72999737610032789999862886896
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYID 110 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyvD 110 (419)
+|+||-.-|=..+.+.++.+.++|+.++.
T Consensus 66 ~d~vV~SPGI~~~~p~~~~a~~~~i~i~s 94 (438)
T PRK03806 66 ADLIVASPGIALAHPSLSAAADAGVEIVG 94 (438)
T ss_pred CCEEEECCCCCCCCHHHHHHHHCCCCEEE
T ss_conf 99999899789989899999987994776
No 442
>COG2344 AT-rich DNA-binding protein [General function prediction only]
Probab=96.63 E-value=0.012 Score=36.53 Aligned_cols=90 Identities=17% Similarity=0.216 Sum_probs=64.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
-+|+++|+|..|++++.|--.......-+.+=|-++++.-. ++.-+-+.|.+.|...++.+..
T Consensus 85 tnviiVG~GnlG~All~Y~f~~~~~~~iv~~FDv~~~~VG~-----------------~~~~v~V~~~d~le~~v~~~dv 147 (211)
T COG2344 85 TNVIIVGVGNLGRALLNYNFSKKNGMKIVAAFDVDPDKVGT-----------------KIGDVPVYDLDDLEKFVKKNDV 147 (211)
T ss_pred EEEEEECCCHHHHHHHCCCCHHHCCCEEEEEECCCHHHHCC-----------------CCCCEEEECHHHHHHHHHHCCC
T ss_conf 34899905708889860742332693599996178788375-----------------2488145526888889886176
Q ss_pred CEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 299973761003278999986288689
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
++.|-|+|.-..-.++...+++|+.-+
T Consensus 148 ~iaiLtVPa~~AQ~vad~Lv~aGVkGI 174 (211)
T COG2344 148 EIAILTVPAEHAQEVADRLVKAGVKGI 174 (211)
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEE
T ss_conf 189997348989999999998387358
No 443
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.63 E-value=0.024 Score=34.58 Aligned_cols=89 Identities=16% Similarity=0.167 Sum_probs=56.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
-||.|+|.|.+|..++..|.+. + .+++-.||+.+.++...+. +- +... ..+.+ .++ ++
T Consensus 2 mkI~IiGlGLIGgSla~al~~~-~--~~V~g~d~~~~~~~~A~~~-g~---------id~~---~~~~~----~~~--~a 59 (280)
T PRK07417 2 MNIGIVGLGLIGGSLGLDLRSL-G--HTVYGVSRRESTCERAIER-GL---------VDEA---STDLS----LLK--DC 59 (280)
T ss_pred CEEEEEECCHHHHHHHHHHHHC-C--CEEEEEECCHHHHHHHHHC-CC---------CCEE---CCCHH----HHC--CC
T ss_conf 7899993185799999999968-9--9799997999999999986-99---------7520---27874----605--79
Q ss_pred CEEEECCCCCCCHHHHHHHHH---CCCCEEEECC
Q ss_conf 299973761003278999986---2886896036
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACID---SNVAYIDTAI 113 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~---~g~hyvD~s~ 113 (419)
|+||-|+|+..-..+++.... .++=..|++.
T Consensus 60 Dliila~Pv~~~~~~~~~~~~~l~~~~iitDv~S 93 (280)
T PRK07417 60 DLVILALPIGLLLPPSEELIPALPPEAIVTDVGS 93 (280)
T ss_pred CEEEECCCHHHHHHHHHHHHHHCCCCCEEEECHH
T ss_conf 9899879747789999999864789848996522
No 444
>KOG2865 consensus
Probab=96.61 E-value=0.01 Score=37.11 Aligned_cols=97 Identities=19% Similarity=0.273 Sum_probs=66.7
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHH-HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 999849-877999999999608987259996399999-999998734302455555730899437898999999975397
Q gi|254780742|r 5 VLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQK-CSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 5 ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
.-|+|| |..|+.++..|++... ++.+--|-.+- .+. +. .......+-....|..|.+++++.++ ++
T Consensus 64 aTVFGAtGFlGryvvnklak~GS---QviiPyR~d~~~~r~----lk---vmGdLGQvl~~~fd~~DedSIr~vvk--~s 131 (391)
T KOG2865 64 ATVFGATGFLGRYVVNKLAKMGS---QVIIPYRGDEYDPRH----LK---VMGDLGQVLFMKFDLRDEDSIRAVVK--HS 131 (391)
T ss_pred EEEECCCCCCCHHHHHHHHHCCC---EEEEECCCCCCCHHH----EE---ECCCCCCEEEECCCCCCHHHHHHHHH--HC
T ss_conf 99852644120899998863587---699853588644545----00---02543334564167778799999987--47
Q ss_pred CEEEECCCCCC--------------CHHHHHHHHHCCCC-EEEECC
Q ss_conf 29997376100--------------32789999862886-896036
Q gi|254780742|r 83 QIIINVGSSFL--------------NMSVLRACIDSNVA-YIDTAI 113 (419)
Q Consensus 83 dvVin~~~p~~--------------~~~v~~a~i~~g~h-yvD~s~ 113 (419)
.||||++|-.+ ...+++.|-|+|+- ||-+|.
T Consensus 132 NVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~ 177 (391)
T KOG2865 132 NVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSC 177 (391)
T ss_pred CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHEEEHHH
T ss_conf 5799840353445886612001458999999998628352541654
No 445
>PRK08268 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.60 E-value=0.0067 Score=38.34 Aligned_cols=79 Identities=15% Similarity=0.204 Sum_probs=51.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCC-------------CCCCEEEEECCCC
Q ss_conf 319998498779999999996089872599963999999999987343024555-------------5573089943789
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKI-------------DGKLAIHQVDALN 69 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~-------------~~~~~~~~~D~~d 69 (419)
|+|-|+|||.||+.++..++... .++++.|++.+.+++..+.+........ ..++.. ..|
T Consensus 4 ~~VaViGaGtMG~gIA~~~a~aG---~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~g~~~~~~~~~~~~ri~~----~~~ 76 (503)
T PRK08268 4 ATVAVIGAGAMGAGIAQVAAQAG---HTVLLYDARAGAAAAARDGIAATLAKLVEKGKLTAEQAEAALARLRP----VEA 76 (503)
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEE----ECC
T ss_conf 78999796889999999999389---90899979989999999999999999997699998899999847474----177
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf 8999999975397299973761003
Q gi|254780742|r 70 IKAVVELIKKTNSQIIINVGSSFLN 94 (419)
Q Consensus 70 ~~~l~~~~~~~~~dvVin~~~p~~~ 94 (419)
+.. ++ ++|+||-+++--+.
T Consensus 77 ---l~~-l~--~aDlVIEAV~E~l~ 95 (503)
T PRK08268 77 ---LAD-LA--DCDLVVEAIVERLD 95 (503)
T ss_pred ---HHH-HC--CCCEEEECCCCCHH
T ss_conf ---889-75--79999993606789
No 446
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=96.60 E-value=0.018 Score=35.48 Aligned_cols=131 Identities=12% Similarity=0.068 Sum_probs=78.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEE----EEC--CCCHHHHHHH
Q ss_conf 3199984987799999999960898725999639999999999873430245555573089----943--7898999999
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIH----QVD--ALNIKAVVEL 76 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~D--~~d~~~l~~~ 76 (419)
.+|-|+|.|.||-..+.-|++.++ +++..|.|++|.+.+.+... +.+++.++.. ..+ ..-....++.
T Consensus 1 MkI~viGtGYVGLv~g~~lA~~GH---eVv~vDid~~KV~~ln~g~~----PI~EpgLe~ll~~~~~~gRl~fTtd~~~a 73 (414)
T COG1004 1 MKITVIGTGYVGLVTGACLAELGH---EVVCVDIDESKVELLNKGIS----PIYEPGLEELLKENLASGRLRFTTDYEEA 73 (414)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHCCCC----CCCCCCHHHHHHHCCCCCCEEEECCHHHH
T ss_conf 915898885568878999987098---48999578899999867999----97670589999846235727987478889
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHH
Q ss_conf 97539729997376100327899998628868960366420000144200003577510888851886995375011148
Q gi|254780742|r 77 IKKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVV 156 (419)
Q Consensus 77 ~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~ 156 (419)
++ .+|+++-|+|-.+. + ..+.|+++.....+.+.+ ......++|.-.=+-||-+
T Consensus 74 ~~--~adv~fIavgTP~~--------~--dg~aDl~~V~ava~~i~~--------------~~~~~~vvV~KSTVPvGt~ 127 (414)
T COG1004 74 VK--DADVVFIAVGTPPD--------E--DGSADLSYVEAVAKDIGE--------------ILDGKAVVVIKSTVPVGTT 127 (414)
T ss_pred HH--CCCEEEEECCCCCC--------C--CCCCCHHHHHHHHHHHHH--------------HCCCCEEEEECCCCCCCCH
T ss_conf 62--59779997489999--------8--897328999999999986--------------2678739998488798846
Q ss_pred HHHHHHHHHH
Q ss_conf 8999999997
Q gi|254780742|r 157 NAFARLAQDE 166 (419)
Q Consensus 157 ~lla~~~~~~ 166 (419)
+-+.......
T Consensus 128 ~~v~~~i~~~ 137 (414)
T COG1004 128 EEVRAKIREE 137 (414)
T ss_pred HHHHHHHHHH
T ss_conf 9999999863
No 447
>KOG1610 consensus
Probab=96.58 E-value=0.027 Score=34.25 Aligned_cols=80 Identities=19% Similarity=0.175 Sum_probs=61.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
+|-|+|-|| .+-|+..|.+|.+.. ..+.-+-.+.+.++.+..+.. .+|..+.++|+.+++++++..+-.
T Consensus 29 ~k~VlITGCDSGfG~~LA~~l~~~G---f~V~Agclt~~gae~L~~~~~-------s~rl~t~~LDVT~~esi~~a~~~V 98 (322)
T KOG1610 29 DKAVLITGCDSGFGRLLAKKLDKKG---FRVFAGCLTEEGAESLRGETK-------SPRLRTLQLDVTKPESVKEAAQWV 98 (322)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEECCCHHHHHHHHHC-------CCCCEEEEECCCCHHHHHHHHHHH
T ss_conf 7379983477177799999998658---878887206705898763233-------874024753258878999999999
Q ss_pred -------CCCEEEECCCC
Q ss_conf -------97299973761
Q gi|254780742|r 81 -------NSQIIINVGSS 91 (419)
Q Consensus 81 -------~~dvVin~~~p 91 (419)
+-.-|||.+|-
T Consensus 99 ~~~l~~~gLwglVNNAGi 116 (322)
T KOG1610 99 KKHLGEDGLWGLVNNAGI 116 (322)
T ss_pred HHHCCCCCCEEEEECCCC
T ss_conf 986466551357733664
No 448
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=96.57 E-value=0.022 Score=34.88 Aligned_cols=148 Identities=15% Similarity=0.126 Sum_probs=88.4
Q ss_pred CCC-EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHH-HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 973-1999849877999999999608987259996399999-99999873430245555573089943789899999997
Q gi|254780742|r 1 MKK-NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQK-CSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK 78 (419)
Q Consensus 1 M~k-~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~ 78 (419)
|+| ++-|+|.|.+|.=...++.+ +++..-..++|||++. .-+.+++++ +.+ -..-.+.+.+...
T Consensus 2 ~~k~~vAIiGsGnIGtDLm~Ki~R-s~~le~~~~vG~dp~S~GL~rA~~lG----------v~t---s~~GId~ll~~~~ 67 (298)
T PRK08300 2 MSKIKVAIIGSGNIGTDLMIKILR-SPHLEPVAMVGIDPESDGLARARRLG----------VAT---TAEGIDGLLAHPE 67 (298)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHC-CCCEEEEEEEECCCCCHHHHHHHHCC----------CCC---CCCCHHHHHHCCC
T ss_conf 875349998888338999999865-77610699980598984999999849----------966---3767999961833
Q ss_pred HCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCC-CHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
Q ss_conf 53972999737610032789999862886896036642-00001442000035775108888518869953750111488
Q gi|254780742|r 79 KTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHES-PLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVN 157 (419)
Q Consensus 79 ~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~-~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ 157 (419)
...+|+|.++...+.|..-++..-+.|+-.||++-.-- ++. .++ .-+++...+.++-+|..-|-+..+-
T Consensus 68 ~~~idiVFDATSA~aH~~h~~~l~~~g~~~IDLTPAaiGp~~--VP~-------VNl~~~l~~~NvNMVTCGGQAtiPi- 137 (298)
T PRK08300 68 FDDIDIVFDATSAGAHVENAAKLRELGVRVIDLTPAAIGPYC--VPA-------VNLDEHLDAPNVNMVTCGGQATIPI- 137 (298)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEE--ECC-------CCHHHHCCCCCCCEEEECCCHHHHH-
T ss_conf 568788997898066899999999739879967700269878--763-------7789955799864365557302189-
Q ss_pred HHHHHHHHHHCCCCCEEEE
Q ss_conf 9999999974366638976
Q gi|254780742|r 158 AFARLAQDEYFDKITDIDI 176 (419)
Q Consensus 158 lla~~~~~~~~d~~~~i~~ 176 (419)
+ +++.+. ..++.+.+
T Consensus 138 --v-~Avsrv-~~V~YaEi 152 (298)
T PRK08300 138 --V-AAVSRV-APVHYAEI 152 (298)
T ss_pred --H-HHHHHC-CCCCEEEE
T ss_conf --9-998742-76317998
No 449
>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.57 E-value=0.0079 Score=37.85 Aligned_cols=85 Identities=13% Similarity=0.133 Sum_probs=52.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.|+|+|+|.|..|..++++|.++.. .+++.|.+.+.++... .+. ...++. .+ .... .
T Consensus 3 ~KkvlV~GlG~SG~s~a~~L~~~g~---~v~~~D~~~~~~~~~~-~~~------------~~~~~~--~~---~~~~--~ 59 (418)
T PRK00683 3 LQRVVVLGLGVTGKSVARFLAQKGV---YVIGVDNSLEALQSCP-YIH------------ERYLEG--AE---EFPE--Q 59 (418)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCC---EEEEECCCHHHHHHCC-HHH------------HHCCCC--HH---HCCC--C
T ss_conf 8669998088879999999997829---8999829814545461-455------------540562--33---2423--4
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 7299973761003278999986288689
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
.|+||-.-|=....++++.+.+.|+..+
T Consensus 60 ~d~vv~SPGi~~~~p~~~~a~~~~i~i~ 87 (418)
T PRK00683 60 VDLVVRSPGIKPYHPWVEAAVALKIPVV 87 (418)
T ss_pred CCEEEECCCCCCCCHHHHHHHHCCCCCC
T ss_conf 9899989985998899999998699754
No 450
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.56 E-value=0.0073 Score=38.07 Aligned_cols=79 Identities=25% Similarity=0.272 Sum_probs=49.0
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCH--HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 1999849-8779999999996089872599963999--999999987343024555557308994378989999999753
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTL--QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
||.|+|| |.||+.++..|+.+. ...++++-|++. ++++..+-.|........ ....+. ...|.+ .++
T Consensus 2 KV~IiGAaG~VG~~~a~~l~~~~-~~~el~LiD~~~~~~~a~g~a~Dl~~~~~~~~-~~~~i~--~~~d~~----~~~-- 71 (309)
T cd05294 2 KVSIIGASGRVGSATALLLAKED-VVKEINLISRPKSLEKLKGLRLDIYDALAAAG-IDAEIK--ISSDLS----DVA-- 71 (309)
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-CCCEEEEEECCCCCCCCCEEEHHHHCCCCCCC-CCCEEE--ECCCHH----HHC--
T ss_conf 89999999769999999998379-98759996055643423112355450343368-876798--279889----968--
Q ss_pred CCCEEEECCCCC
Q ss_conf 972999737610
Q gi|254780742|r 81 NSQIIINVGSSF 92 (419)
Q Consensus 81 ~~dvVin~~~p~ 92 (419)
++|+||.++|..
T Consensus 72 daDivVitAG~~ 83 (309)
T cd05294 72 GSDIVIITAGVP 83 (309)
T ss_pred CCCEEEECCCCC
T ss_conf 999999878988
No 451
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.55 E-value=0.0032 Score=40.49 Aligned_cols=134 Identities=13% Similarity=0.126 Sum_probs=75.3
Q ss_pred CCC--EEEEECC-CHHHHHHHHHHHHCC-CCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 973--1999849-877999999999608-987259996399999999998734302455555730899437898999999
Q gi|254780742|r 1 MKK--NVLIIGA-GGVAHVVAHKCAQNN-DILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVEL 76 (419)
Q Consensus 1 M~k--~ilv~Ga-G~vG~~~~~~L~~~~-~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~ 76 (419)
|.+ +|-|+|| |.||+.+.+.|..+. ++..-..+|+. .+..+. ... ....+.+. |+.+ .+
T Consensus 1 M~~~~~VaivGATG~VGq~~l~lL~e~~fp~~~l~~laS~-~SaGk~--------i~~-~~~~~~v~--~~~~-~~---- 63 (337)
T PRK08040 1 MSEGWNIALLGATGAVGEALLETLAERQFPVGEIYALARE-ESAGET--------LRF-GGKSITVQ--DAAE-FD---- 63 (337)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECC-CCCCCE--------EEE-CCCEEEEE--ECCC-CC----
T ss_conf 9999879998885088999999997179981359999888-889977--------778-99188999--7770-33----
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHH--CCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHH
Q ss_conf 9753972999737610032789999862886896036642000--01442000035775108888518869953750111
Q gi|254780742|r 77 IKKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLK--ICESPPWYNNYEWSLLDECRTKSITAILGAGFDPG 154 (419)
Q Consensus 77 ~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~--~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PG 154 (419)
.+ ++|+++.++|.......+..+.++|+..||-+.....-. .+ -.|.+....+ ...++.|+.+.|+|-..+-
T Consensus 64 ~~--~~di~ff~a~~~~s~~~~~~a~~aG~~VIDnss~~Rm~~dVPL-vvPeVN~~~l---~~~~~~~IianPNCsT~~l 137 (337)
T PRK08040 64 WT--QAQLAFFVAGKEASAAYAEEATNAGCLVIDSSGLFALEPDVPL-VVPEVNPFVL---ADYRNRNVIAVADSLTSQL 137 (337)
T ss_pred CC--CCCEEEECCCCHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCC-CCCCCCHHHH---HHHCCCCEEECCCHHHHHH
T ss_conf 24--6988999177178888899998489599979613105888742-1674087888---7432498254577088888
Q ss_pred HHH
Q ss_conf 488
Q gi|254780742|r 155 VVN 157 (419)
Q Consensus 155 l~~ 157 (419)
+.-
T Consensus 138 ~~a 140 (337)
T PRK08040 138 LAA 140 (337)
T ss_pred HHH
T ss_conf 987
No 452
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=96.55 E-value=0.066 Score=31.63 Aligned_cols=131 Identities=13% Similarity=0.136 Sum_probs=75.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEE----------CCHHHHHHHHHHHHHHCCC--CCCCCCEEEEECCCC
Q ss_conf 7319998498779999999996089872599963----------9999999999873430245--555573089943789
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIAS----------RTLQKCSKIIDSIYKKKSL--KIDGKLAIHQVDALN 69 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~----------r~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~D~~d 69 (419)
.++|+|-|-|.||+.++++|.+..- .-+.|+| .|.+++..+.+.-...... .....+... ...+
T Consensus 38 g~~vaIQGfGnVG~~aA~~l~e~Ga--kvVaVsD~~G~i~~~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~~~--~~~~ 113 (254)
T cd05313 38 GKRVAISGSGNVAQYAAEKLLELGA--KVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTA--KYFE 113 (254)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCC--EECC
T ss_conf 9999998977999999999997799--79999857850887999988999999999974687102444138985--6638
Q ss_pred HHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 89999999753972999737610-03278999986288689603664200001442000035775108888518869953
Q gi|254780742|r 70 IKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILG 148 (419)
Q Consensus 70 ~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~ 148 (419)
.+++ +. ..|||+|=|+-.- .+..-++....++|.+|--...-+... +=++...++|+.++|+
T Consensus 114 ~~~~---~~-~~cDIliPaA~en~I~~~nA~~i~a~~ck~IvEgANgP~T~-------------eAd~iL~~kGI~viPD 176 (254)
T cd05313 114 GKKP---WE-VPCDIAFPCATQNEVDAEDAKLLVKNGCKYVAEGANMPCTA-------------EAIEVFRQAGVLFAPG 176 (254)
T ss_pred CCCH---HH-CCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCH-------------HHHHHHHHCCCEEECH
T ss_conf 9751---33-04769974354667899999999967982998658899987-------------8999999889889680
Q ss_pred CCHHH
Q ss_conf 75011
Q gi|254780742|r 149 AGFDP 153 (419)
Q Consensus 149 ~G~~P 153 (419)
.=...
T Consensus 177 ilaNA 181 (254)
T cd05313 177 KAANA 181 (254)
T ss_pred HHHCC
T ss_conf 56207
No 453
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=96.52 E-value=0.0072 Score=38.13 Aligned_cols=81 Identities=15% Similarity=0.117 Sum_probs=53.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
+||.|+|+|+||+..+..|+. .....++++-|++.++++-.+-.|.........+ . ....| .|. +-++ ++
T Consensus 1 ~KV~viGaG~VG~s~a~~l~~-~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~-~i~~~-~~y----~~~~--~a 70 (313)
T COG0039 1 MKVAVIGAGNVGSSLAFLLLL-QGLGSELVLIDINEEKAEGVALDLSHAAAPLGSD-V-KITGD-GDY----EDLK--GA 70 (313)
T ss_pred CEEEEECCCHHHHHHHHHHHC-CCCCCEEEEEECCCCCCCCHHCCHHHCCHHCCCC-E-EEECC-CCH----HHHC--CC
T ss_conf 939998987478999999962-5556659999746665640110253340002676-1-88347-870----2316--99
Q ss_pred CEEEECCCCCC
Q ss_conf 29997376100
Q gi|254780742|r 83 QIIINVGSSFL 93 (419)
Q Consensus 83 dvVin~~~p~~ 93 (419)
|+|+-++|...
T Consensus 71 DiVvitAG~pr 81 (313)
T COG0039 71 DIVVITAGVPR 81 (313)
T ss_pred CEEEEECCCCC
T ss_conf 89999688889
No 454
>KOG0069 consensus
Probab=96.51 E-value=0.042 Score=32.97 Aligned_cols=12 Identities=17% Similarity=0.313 Sum_probs=6.7
Q ss_pred HHHHHCCCEEEE
Q ss_conf 888851886995
Q gi|254780742|r 136 DECRTKSITAIL 147 (419)
Q Consensus 136 ~~a~~ag~~~i~ 147 (419)
++|++.|+++-.
T Consensus 101 ~a~~krgI~V~n 112 (336)
T KOG0069 101 EAARKRGIRVAN 112 (336)
T ss_pred HHHHHCCCEEEC
T ss_conf 989865966860
No 455
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.50 E-value=0.029 Score=34.01 Aligned_cols=92 Identities=10% Similarity=0.109 Sum_probs=55.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 7319998498779999999996089872599963999-999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|+|+|+|.|..|.+++++|.++. .++++.|.+. +.+....+.+... .+....-+ . .+ +-+.
T Consensus 14 ~kkv~i~GlG~sG~a~a~~L~~~g---~~v~~~D~~~~~~~~~~~~~l~~~-------gi~~~~g~-~---~~-~~~~-- 76 (458)
T PRK01710 14 NKKVAVVGIGVSNIPLIKFLVKLG---AKVTAFDKKSEEELGEISLELKEK-------GVNLELGE-N---YL-DKLT-- 76 (458)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCC---CEEEEEECCCCHHHHHHHHHHHHC-------CCEEEECC-C---HH-HHCC--
T ss_conf 996999978788999999999788---979999898843148999999857-------99899578-4---05-4237--
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 972999737610032789999862886896
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRACIDSNVAYID 110 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~i~~g~hyvD 110 (419)
++|+||-.-|-....+.+.++.++|+..+.
T Consensus 77 ~~d~vv~SPgI~~~~p~~~~a~~~gi~v~~ 106 (458)
T PRK01710 77 GFDVIFKTPSMRIDSPELVKAKEEGAYITS 106 (458)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHCCCCEEC
T ss_conf 888899899879989999999987993740
No 456
>PRK08309 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.019 Score=35.25 Aligned_cols=67 Identities=19% Similarity=0.186 Sum_probs=53.3
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 1999849877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
..||+|++||=..+...|++... ++.|.+|+.++++.+.+.-. ....+....+|..|.++|+..+++
T Consensus 2 haLVIGGTGML~~vs~~L~~qg~---~VsiiaR~~~kl~~~~~~~~------~p~~i~~l~~DY~d~~~l~~~l~~ 68 (182)
T PRK08309 2 HALVIGGTGMLKRVSLWLCEEGF---HVSIIARDEVKLENVKRESG------TPESITCLPLDYHDDDAVKLAIKR 68 (182)
T ss_pred CEEEECCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCC------CCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 16997241755999999973799---99999448788653686237------986325787464886999999999
No 457
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.47 E-value=0.011 Score=37.00 Aligned_cols=89 Identities=15% Similarity=0.147 Sum_probs=56.2
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
+|.|+|.|.+|..++..|.+... ..+|.-.|+|++.++...+ ++. +.. +.+.+. ++ ++|
T Consensus 2 ~I~IiGlGLiGgSla~alk~~~~-~~~V~g~d~~~~~~~~A~~-~g~---------id~----~~~~~~----i~--~aD 60 (275)
T PRK08507 2 KIGIIGLGLMGGSLGLALKENKL-ISCVYGYDHNEEHEKDALD-LGL---------VDE----IVEFEE----IK--ECD 60 (275)
T ss_pred EEEEEECCHHHHHHHHHHHHCCC-CCEEEEEECCHHHHHHHHH-CCC---------CCC----CCCHHH----CC--CCC
T ss_conf 89999008789999999995099-8679999599999999998-699---------861----067312----36--579
Q ss_pred EEEECCCCCCCHHHHHHHH--HCCCCEEEECC
Q ss_conf 9997376100327899998--62886896036
Q gi|254780742|r 84 IIINVGSSFLNMSVLRACI--DSNVAYIDTAI 113 (419)
Q Consensus 84 vVin~~~p~~~~~v~~a~i--~~g~hyvD~s~ 113 (419)
+||-|+|+..-..+++... ..++-..|++.
T Consensus 61 lVila~Pv~~~~~~l~~l~~l~~~~iitDv~S 92 (275)
T PRK08507 61 VIFLAIPVDAIIEILQKLLDIKENTTIIDLGS 92 (275)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 89991769999999999860467888983431
No 458
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=96.44 E-value=0.049 Score=32.52 Aligned_cols=43 Identities=14% Similarity=0.100 Sum_probs=24.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHH----HCCCCCCEEEEEECCHHHHHH
Q ss_conf 9731999849877999999999----608987259996399999999
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCA----QNNDILGDINIASRTLQKCSK 43 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~----~~~~~~~~i~va~r~~~~~~~ 43 (419)
|.|.|.+=..|+.-..-...+. ...++..++.-++.|......
T Consensus 1 m~kav~~~~~G~p~~L~~~~~~~p~p~~~eVlVkV~a~gin~~D~~~ 47 (327)
T PRK10754 1 MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYI 47 (327)
T ss_pred CCEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHH
T ss_conf 98499980568960039997689999999899999999279899999
No 459
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.42 E-value=0.018 Score=35.45 Aligned_cols=41 Identities=10% Similarity=0.089 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHCCCCE-EEECCCCCCCHHHHHHHHHCCCCEEEE
Q ss_conf 9899999997539729-997376100327899998628868960
Q gi|254780742|r 69 NIKAVVELIKKTNSQI-IINVGSSFLNMSVLRACIDSNVAYIDT 111 (419)
Q Consensus 69 d~~~l~~~~~~~~~dv-Vin~~~p~~~~~v~~a~i~~g~hyvD~ 111 (419)
-|.+++++... +-.| |=+.+|-..+..= ..-.++|++.+..
T Consensus 19 tP~~V~~l~~~-GheVlVe~gAG~gsg~~D-~~Y~~aGA~Iv~t 60 (371)
T COG0686 19 TPASVRELVNH-GHEVLVETGAGAGSGFDD-DDYEAAGAKIVAT 60 (371)
T ss_pred CHHHHHHHHHC-CCEEEEECCCCCCCCCCH-HHHHHCCCEEECC
T ss_conf 75769999737-958999658767789882-7889728877458
No 460
>PRK02318 mannitol-1-phosphate 5-dehydrogenase; Provisional
Probab=96.41 E-value=0.062 Score=31.82 Aligned_cols=85 Identities=15% Similarity=0.256 Sum_probs=55.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCC-CC--C---C-EEEEECCCCHHHHHHH
Q ss_conf 19998498779999999996089872599963999999999987343024555-55--7---3-0899437898999999
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKI-DG--K---L-AIHQVDALNIKAVVEL 76 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~-~~--~---~-~~~~~D~~d~~~l~~~ 76 (419)
++|.+|||.+||.-+..+..+.++ +++.+|.|..-...+.+. .. ..... .. . + .+..++..|.+++.+.
T Consensus 2 KavhFGAGNigRGFI~~ll~~~g~--~v~Fvdvn~~li~~Ln~~-~~-Y~v~~~g~~~~~~~V~~v~ai~~~~~~~v~~~ 77 (381)
T PRK02318 2 KALHFGAGNIGRGFIGKLLADNGF--EVTFADVNQEIIDALNKR-KS-YQVIVVGEGEQVETVSNVSAINSKDEEAVIEL 77 (381)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHCC-CC-EEEEEECCCCCEEEEEEEEEECCCCHHHHHHH
T ss_conf 469978742212668999997797--699995878899998606-98-58999338862699977899868998999999
Q ss_pred HHHCCCCEEEECCCCCCC
Q ss_conf 975397299973761003
Q gi|254780742|r 77 IKKTNSQIIINVGSSFLN 94 (419)
Q Consensus 77 ~~~~~~dvVin~~~p~~~ 94 (419)
+. .+|+|-.++||..-
T Consensus 78 i~--~aDiiTt~vGp~~l 93 (381)
T PRK02318 78 IA--EADLITTAVGPNIL 93 (381)
T ss_pred HH--CCCEEEECCCHHHH
T ss_conf 84--58989964582556
No 461
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.40 E-value=0.016 Score=35.71 Aligned_cols=85 Identities=14% Similarity=0.189 Sum_probs=51.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.|+|+|+|.|..|..++++|.+.. .++++.|.+++...++.+. .+... |..+.+ .. .
T Consensus 9 gk~v~v~GlG~sG~s~a~~L~~~G---~~V~~~D~~~~~~~~~~~~-----------g~~~~--~~~~~~-----~~--~ 65 (457)
T PRK01390 9 GKTVALFGLGGSGLATARALKAGG---AEVIAWDDNPDSVAKAAAA-----------GIATA--DLRTAD-----WS--Q 65 (457)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCC---CEEEEEECCCHHHHHHHHC-----------CCCCC--CCCCCC-----CC--C
T ss_conf 998999943699999999999789---9799993992066899875-----------98314--554123-----20--3
Q ss_pred CC-EEEECCCCCCCHH---HHHHHHHCCCCEE
Q ss_conf 72-9997376100327---8999986288689
Q gi|254780742|r 82 SQ-IIINVGSSFLNMS---VLRACIDSNVAYI 109 (419)
Q Consensus 82 ~d-vVin~~~p~~~~~---v~~a~i~~g~hyv 109 (419)
.| +|+|-.-|..++. +++.|.+.|+..+
T Consensus 66 ~~~iV~SPGIp~~~p~~~~~v~~a~~~gi~v~ 97 (457)
T PRK01390 66 FAALVLSPGVPLTHPKPHWTVDLARAAGVEVI 97 (457)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHCCCEEE
T ss_conf 87899999888656673199999998599186
No 462
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.38 E-value=0.082 Score=30.99 Aligned_cols=130 Identities=15% Similarity=0.191 Sum_probs=74.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 7319998498779999999996089872599963999-999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|+|||+|+|.||..=++.|++... +++|..-+. +.+..+++.- ++...+ +-.+.+.+.
T Consensus 12 ~k~VlvvGgG~va~rKa~~ll~~ga---~v~Vvs~~~~~el~~~~~~~----------~i~~~~-~~~~~~~~~------ 71 (210)
T COG1648 12 GKKVLVVGGGSVALRKARLLLKAGA---DVTVVSPEFEPELKALIEEG----------KIKWIE-REFDAEDLD------ 71 (210)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEECCCCCHHHHHHHHHC----------CCCHHH-CCCCHHHHC------
T ss_conf 9779998998999999999974699---79998787449999999834----------853100-223636536------
Q ss_pred CCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEE-EECCCHHHHHHHH
Q ss_conf 972999737610-03278999986288689603664200001442000035775108888518869-9537501114889
Q gi|254780742|r 81 NSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITA-ILGAGFDPGVVNA 158 (419)
Q Consensus 81 ~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~-i~~~G~~PGl~~l 158 (419)
++++|+.+.+.. .+..|+++|-+.++.+-.. +..+... ..-+ ......++.+ |..-|-.|.++-+
T Consensus 72 ~~~lviaAt~d~~ln~~i~~~a~~~~i~vNv~-D~p~~~~-f~~P-----------a~~~r~~l~iaIsT~G~sP~la~~ 138 (210)
T COG1648 72 DAFLVIAATDDEELNERIAKAARERRILVNVV-DDPELCD-FIFP-----------AIVDRGPLQIAISTGGKSPVLARL 138 (210)
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHCCCEEEC-CCCCCCC-EEEC-----------EEECCCCEEEEEECCCCCHHHHHH
T ss_conf 82499991699899999999999939935604-8846585-6601-----------054358879999779977499999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780742|r 159 FARLAQ 164 (419)
Q Consensus 159 la~~~~ 164 (419)
+-....
T Consensus 139 ir~~Ie 144 (210)
T COG1648 139 LREKIE 144 (210)
T ss_pred HHHHHH
T ss_conf 999999
No 463
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=96.38 E-value=0.051 Score=32.35 Aligned_cols=87 Identities=10% Similarity=0.150 Sum_probs=53.9
Q ss_pred CEEEEECCCHHHH-HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 3199984987799-999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 3 KNVLIIGAGGVAH-VVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 3 k~ilv~GaG~vG~-~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
|+|.++|.|++|- .+|++|.+.. + +++..|+...... +.|.+ .++++.. =.+++.+ . +
T Consensus 9 k~ih~iGigG~GmsalA~~l~~~G-~--~V~gsD~~~~~~~---~~L~~-------~Gi~v~~--g~~~~~l----~--~ 67 (459)
T PRK00421 9 KRIHFVGIGGIGMSGLAEVLLNLG-Y--KVSGSDLKESAVT---QRLLE-------LGAIIFI--GHDAENI----K--G 67 (459)
T ss_pred CEEEEEEECHHHHHHHHHHHHHCC-C--EEEEECCCCCHHH---HHHHH-------CCCEEEC--CCCHHHC----C--C
T ss_conf 889999866888999999999689-9--3999889899789---99997-------8799977--9897987----9--9
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 72999737610032789999862886896
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYID 110 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyvD 110 (419)
+|+||-.-+-..+.+.+++|.+.|++++.
T Consensus 68 ~d~vV~Sp~I~~~~p~~~~a~~~gi~v~~ 96 (459)
T PRK00421 68 ADVVVVSSAIKPDNPELVAARELGIPVVR 96 (459)
T ss_pred CCEEEECCCCCCCCHHHHHHHHCCCCEEE
T ss_conf 99999899859989999999987997988
No 464
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.36 E-value=0.046 Score=32.70 Aligned_cols=93 Identities=9% Similarity=0.140 Sum_probs=52.4
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 9998498779999999996089872599963999-999999987343024555557308994378989999999753972
Q gi|254780742|r 5 VLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 5 ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
-+|+|.|..|..++++|.++. .++++.|.+. ..+....+.|... .+.+..-.-.+.......+. ++|
T Consensus 3 a~V~GlG~sG~s~a~~L~~~G---~~v~~~D~~~~~~~~~~~~~L~~~-------gi~~~~g~~~~~~~~~~~~~--~~d 70 (459)
T PRK02705 3 AHVIGLGRSGIAAARLLKAQG---WEVVVSERNDSPELLERQQELEQE-------GITVELGKPLELESFQPWLD--QPD 70 (459)
T ss_pred EEEEEECHHHHHHHHHHHHCC---CEEEEEECCCCCCHHHHHHHHHHC-------CCEEEECCCCCCCCHHHHCC--CCC
T ss_conf 999954899999999999789---959999898992347899999875-------98698167666430133116--788
Q ss_pred EEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 99973761003278999986288689
Q gi|254780742|r 84 IIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 84 vVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
+||-.-|=....+.++.+.+.|++.+
T Consensus 71 ~vV~SPGI~~~~p~~~~a~~~gi~i~ 96 (459)
T PRK02705 71 LVVVSPGIPWDHPTLVELREKGIEVI 96 (459)
T ss_pred EEEECCCCCCCCHHHHHHHHCCCCEE
T ss_conf 89989964998999999998799721
No 465
>PRK13790 phosphoribosylamine--glycine ligase; Provisional
Probab=96.36 E-value=0.06 Score=31.87 Aligned_cols=94 Identities=19% Similarity=0.215 Sum_probs=67.4
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
||||+|.|+=-.+++..|.+...+ .++.++-=|..-.+ ++ -....+|..|.+.+.+++++++.|
T Consensus 2 kVLviGsGgREHAla~~l~~s~~v-~~v~~aPGN~g~~~-~a--------------~~~~~i~~~d~~~i~~~a~~~~iD 65 (415)
T PRK13790 2 NVLVIGAGGREHALAYKLNQSNLV-KQVFVIPGNEAMTP-IA--------------EVHTEISESDHQAILDFAKQQNVD 65 (415)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCC-CEEEEECCCHHHHH-HC--------------CCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 799988788999999999629898-98999789557652-23--------------024676855899999999981999
Q ss_pred EEEECCCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf 999737610032789999862886896036
Q gi|254780742|r 84 IIINVGSSFLNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 84 vVin~~~p~~~~~v~~a~i~~g~hyvD~s~ 113 (419)
+||-.=...+...++.++.++|.+.+--+-
T Consensus 66 LvvvGPE~PL~~GivD~l~~~gi~vfGP~k 95 (415)
T PRK13790 66 WVVIGPEQPLIDGLADILRANGFKVFGPNK 95 (415)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEECCCH
T ss_conf 999896078663488886438975989497
No 466
>PRK05086 malate dehydrogenase; Provisional
Probab=96.35 E-value=0.0058 Score=38.76 Aligned_cols=78 Identities=9% Similarity=0.120 Sum_probs=48.1
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 1999849-877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
||.|+|| |.||+.++..|+.+.....++++-|... +++-.+-.|... ....+..... -.|. .+.++ ++
T Consensus 2 KV~IiGA~G~VG~s~A~~l~~~~~~~~el~L~Di~~-~~~G~alDL~h~---~~~~~~~~~~--~~~~---~~~l~--~a 70 (312)
T PRK05086 2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAP-VTPGVAVDLSHI---PTAVKIKGFS--GEDP---TPALE--GA 70 (312)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCC-CCCCHHHHHHCC---CCCCCCCEEE--CCCH---HHHHC--CC
T ss_conf 899998998699999999982898777499975888-861056565478---7546653461--6986---78717--99
Q ss_pred CEEEECCCCC
Q ss_conf 2999737610
Q gi|254780742|r 83 QIIINVGSSF 92 (419)
Q Consensus 83 dvVin~~~p~ 92 (419)
|+||.++|..
T Consensus 71 diVvitAG~~ 80 (312)
T PRK05086 71 DVVLISAGVA 80 (312)
T ss_pred CEEEECCCCC
T ss_conf 9999878989
No 467
>PRK09287 6-phosphogluconate dehydrogenase; Validated
Probab=96.34 E-value=0.075 Score=31.22 Aligned_cols=95 Identities=19% Similarity=0.227 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHC------------CCCCCCCCEEEEECCCC-----HHHHHH
Q ss_conf 7999999999608987259996399999999998734302------------45555573089943789-----899999
Q gi|254780742|r 13 VAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKK------------SLKIDGKLAIHQVDALN-----IKAVVE 75 (419)
Q Consensus 13 vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~------------~~~~~~~~~~~~~D~~d-----~~~l~~ 75 (419)
||+..+..|+++. .+++|-+|+.++.++++++-.... .....||.-..-+-+.. .+.|..
T Consensus 1 MG~nlAlNl~~~G---~~V~vynRt~~k~~~~~~~~~~~~~~~~~~~l~e~v~sl~~PR~IilmV~aG~~vD~vI~~L~~ 77 (459)
T PRK09287 1 MGKNLALNIASNG---YTVAVYNRTPEKTDEFLAEEAKGKKIVPAYTLEEFVASLEKPRKILLMVKAGAPVDAVIEQLLP 77 (459)
T ss_pred CCHHHHHHHHHCC---CEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 9689999999789---8589973988999999981487678503589999997367888799981688429999999985
Q ss_pred HHHHCCCCEEEECCCCCCCHH--HHHHHHHCCCCEEEEC
Q ss_conf 997539729997376100327--8999986288689603
Q gi|254780742|r 76 LIKKTNSQIIINVGSSFLNMS--VLRACIDSNVAYIDTA 112 (419)
Q Consensus 76 ~~~~~~~dvVin~~~p~~~~~--v~~a~i~~g~hyvD~s 112 (419)
+++ ..|+||++-.-+|... -.+.|-+.|+||+|+.
T Consensus 78 ~L~--~gDIiIDgGNS~y~dT~rR~~~l~~kgI~Flg~G 114 (459)
T PRK09287 78 LLE--KGDIIIDGGNSNYTDTIRREKELAEKGIHFIGMG 114 (459)
T ss_pred HCC--CCCEEEECCCCCHHHHHHHHHHHHHCCCEEECCC
T ss_conf 088--9998987999764337999999997599064578
No 468
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.32 E-value=0.012 Score=36.71 Aligned_cols=98 Identities=16% Similarity=0.211 Sum_probs=59.7
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
+++|-|+|| |.||+..+..|.++......+.+.-..++..++..+ +. ...+... -++.|.....
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~-f~-------~~~~~v~-~~~~~~~~~~------ 65 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIE-FG-------GKSIGVP-EDAADEFVFS------ 65 (334)
T ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC-CC-------CCCCCCC-CCCCCCCCCC------
T ss_conf 9189999423558999999987539984057888523115771601-06-------7503576-2113410012------
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCC
Q ss_conf 9729997376100327899998628868960366
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIH 114 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~ 114 (419)
.+|+|+.|+|..+...+...+.++|+-.+|-+..
T Consensus 66 ~~Divf~~ag~~~s~~~~p~~~~~G~~VIdnsSa 99 (334)
T COG0136 66 DVDIVFFAAGGSVSKEVEPKAAEAGCVVIDNSSA 99 (334)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 4999999176687899999999769889968731
No 469
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.31 E-value=0.086 Score=30.84 Aligned_cols=34 Identities=24% Similarity=0.419 Sum_probs=28.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH
Q ss_conf 7319998498779999999996089872599963999
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL 38 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~ 38 (419)
+|+|+|+|.|..|..++++|.++.. ++++.|-+.
T Consensus 7 ~k~vlV~GlG~sG~a~a~~L~~~G~---~V~~~D~~~ 40 (501)
T PRK02006 7 RPMVLVLGLGESGLAMARWCARHGC---RLRVADTRE 40 (501)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCC---EEEEEECCC
T ss_conf 9839998336889999999997898---499998999
No 470
>PRK04663 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.31 E-value=0.025 Score=34.42 Aligned_cols=89 Identities=10% Similarity=0.194 Sum_probs=47.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
|+|+|+|.|..|..++++|.++... ..+.+.|-+... ...+.+. ..++... .-.+.+. +. ++
T Consensus 8 KkvlV~GlG~sG~s~a~~L~~~~~~-~~v~~~D~~~~~--~~~~~l~--------~~~~~~~-g~~~~~~----l~--~~ 69 (438)
T PRK04663 8 KNVVVVGLGITGLSVVKHLRKTQPQ-LTVKVIDTRETP--PGQEQLP--------EDVELHS-GGWNQDW----LA--EA 69 (438)
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCC-CEEEEECCCCCH--HHHHHHH--------CCCEEEE-CCCCHHH----HC--CC
T ss_conf 7499990678589999999966998-469996398893--6887620--------6976972-7889678----36--89
Q ss_pred CEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 299973761003278999986288689
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
|+||-.-|=..+.+.++.+.+.|++.+
T Consensus 70 d~vV~SPGI~~~~p~~~~a~~~~i~i~ 96 (438)
T PRK04663 70 DLVVTNPGIALATPEIQPVLAKGIPVV 96 (438)
T ss_pred CEEEECCCCCCCCHHHHHHHHCCCCEE
T ss_conf 999989976998989999998699370
No 471
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=96.31 E-value=0.05 Score=32.42 Aligned_cols=106 Identities=14% Similarity=0.191 Sum_probs=59.4
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCC-----CCEEEEEECCHHH-HHHHHHHHHHHC-CCCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 199984987799999999960898-----7259996399999-999998734302-455555730899437898999999
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDI-----LGDINIASRTLQK-CSKIIDSIYKKK-SLKIDGKLAIHQVDALNIKAVVEL 76 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~-----~~~i~va~r~~~~-~~~~~~~l~~~~-~~~~~~~~~~~~~D~~d~~~l~~~ 76 (419)
||.|+|+|..|++++..|+++... .-++.+..|+.+. -+++.+.+.... +..+.|.++.- -++.-..++.+.
T Consensus 1 KI~ViGaGawGTALA~~La~ng~~~~~~~~~~V~lw~r~~~~~~~~~~~~in~~~~N~~yLp~i~Lp-~~i~~t~dl~~~ 79 (342)
T TIGR03376 1 RVAVVGSGNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLP-ANLVAVPDLVEA 79 (342)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCEEEECCHHHH
T ss_conf 9899877999999999999748865455786379997232210046899997449686779878489-860896689999
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHH---HHHCCCCEEEEC
Q ss_conf 975397299973761003278999---986288689603
Q gi|254780742|r 77 IKKTNSQIIINVGSSFLNMSVLRA---CIDSNVAYIDTA 112 (419)
Q Consensus 77 ~~~~~~dvVin~~~p~~~~~v~~a---~i~~g~hyvD~s 112 (419)
++ ++|++|-++|..+-..+++. .+..++..+..+
T Consensus 80 ~~--~ad~ii~avPs~~~r~~~~~l~~~l~~~~~ii~~s 116 (342)
T TIGR03376 80 AK--GADILVFVIPHQFLEGICKQLKGHVKPNARAISCI 116 (342)
T ss_pred HH--CCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 83--69889996686999999999985458887389842
No 472
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=96.30 E-value=0.0068 Score=38.29 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=30.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 9731999849877999999999608987259996399
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRT 37 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~ 37 (419)
|+.+|+|+|+|-+|..+|+.|+++. .+++|-+|.
T Consensus 2 ~r~DVvVIGaGi~G~s~A~~La~~G---~~V~vle~~ 35 (377)
T PRK11259 2 MRYDVIVIGLGSMGSAAGYYLARAG---LRVLGIDRF 35 (377)
T ss_pred CEEEEEEECCCHHHHHHHHHHHHCC---CCEEEECCC
T ss_conf 5048999995299999999999789---959999289
No 473
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=96.29 E-value=0.057 Score=32.04 Aligned_cols=90 Identities=17% Similarity=0.265 Sum_probs=59.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHH-HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849877999999999608987259996399999-9999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQK-CSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
.|+|+|+|+|--|++++.. +++.++ ++.+.|.+.+. +..++ + +....|..|.+.+.++++..
T Consensus 12 ~kkIgIlGgGQLg~Mla~a-A~~LG~--~vivld~~~d~PA~~vA------------d--~~~~~~~~D~~al~~~a~~~ 74 (395)
T PRK09288 12 ATRVMLLGSGELGKEVAIE-AQRLGV--EVIAVDRYANAPAMQVA------------H--RSHVIDMLDGDALRAVIERE 74 (395)
T ss_pred CCEEEEECCCHHHHHHHHH-HHHCCC--EEEEECCCCCCCHHHHC------------C--EEEECCCCCHHHHHHHHHHH
T ss_conf 8889998988999999999-998799--89998489959446728------------6--57977878999999999983
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 97299973761003278999986288689
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
++|+|.--- -......++.+-+.|+...
T Consensus 75 ~~DvvT~E~-E~V~~~~L~~le~~G~~v~ 102 (395)
T PRK09288 75 KPDLIVPEI-EAIATDALVELEAEGFNVV 102 (395)
T ss_pred CCCEEEECC-CCCCHHHHHHHHHCCCEEC
T ss_conf 899899785-4478899999986893367
No 474
>KOG0024 consensus
Probab=96.28 E-value=0.093 Score=30.62 Aligned_cols=80 Identities=14% Similarity=0.189 Sum_probs=42.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 7319998498779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
-.++||+|||-+|-.+..- ++.... .++++.|-...|++. |+++....-. +.+. -.+++.+++.+++.
T Consensus 170 Gs~vLV~GAGPIGl~t~l~-Aka~GA-~~VVi~d~~~~Rle~-Ak~~Ga~~~~----~~~~----~~~~~~~~~~v~~~~ 238 (354)
T KOG0024 170 GSKVLVLGAGPIGLLTGLV-AKAMGA-SDVVITDLVANRLEL-AKKFGATVTD----PSSH----KSSPQELAELVEKAL 238 (354)
T ss_pred CCEEEEECCCHHHHHHHHH-HHHCCC-CCEEEEECCHHHHHH-HHHHCCEEEE----CCCC----CCCHHHHHHHHHHHC
T ss_conf 8868997676899999999-987498-728996067779999-9982975773----0445----565899999998641
Q ss_pred ---CCCEEEECCCCC
Q ss_conf ---972999737610
Q gi|254780742|r 81 ---NSQIIINVGSSF 92 (419)
Q Consensus 81 ---~~dvVin~~~p~ 92 (419)
++|++++|.|-.
T Consensus 239 g~~~~d~~~dCsG~~ 253 (354)
T KOG0024 239 GKKQPDVTFDCSGAE 253 (354)
T ss_pred CCCCCCEEEECCCCH
T ss_conf 666798689866604
No 475
>PRK05784 phosphoribosylamine--glycine ligase; Provisional
Probab=96.25 E-value=0.096 Score=30.50 Aligned_cols=95 Identities=16% Similarity=0.141 Sum_probs=67.4
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEC--CHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 199984987799999999960898725999639--999999999873430245555573089943789899999997539
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASR--TLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
||||+|.|+=-.+++..|++.+.. .++.++-= |+.-.+ +++. ...+...+|.+|.+.+.+++++.+
T Consensus 2 kVLVIGsGGREHAla~kl~~Sp~v-~~l~~aPGn~NpG~~~-~a~~----------~~~~~~~~~~~d~~~i~~fa~~~~ 69 (485)
T PRK05784 2 KVLLVGDGAREHAIAEALAKSPKG-YRIYALSSHLNPGIEE-IVKK----------TGGEYFIGNPTSPGEVVKAAEEVS 69 (485)
T ss_pred EEEEECCCHHHHHHHHHHHCCCCC-CEEEEEECCCCCCHHH-HHHH----------CCCCEECCCCCCHHHHHHHHHHCC
T ss_conf 899989888999999999609898-9899973898752567-7642----------587212048779999999999819
Q ss_pred CCEEEECCCCC--CCHHHHHHHHHCCCCEEEEC
Q ss_conf 72999737610--03278999986288689603
Q gi|254780742|r 82 SQIIINVGSSF--LNMSVLRACIDSNVAYIDTA 112 (419)
Q Consensus 82 ~dvVin~~~p~--~~~~v~~a~i~~g~hyvD~s 112 (419)
.|+||- ||- +...++...-++|...+-=+
T Consensus 70 IDLvvV--GPE~PL~~Gi~D~l~~~gi~vFGP~ 100 (485)
T PRK05784 70 PDLVVI--GPEEPLFAGVADALREEGFPVFGAS 100 (485)
T ss_pred CCEEEE--CCHHHHHHHHHHHHHHCCCCEECCC
T ss_conf 999998--9738876125899973799078968
No 476
>KOG1203 consensus
Probab=96.25 E-value=0.097 Score=30.49 Aligned_cols=100 Identities=19% Similarity=0.292 Sum_probs=58.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC-CHHHHHHHHHHC
Q ss_conf 31999849-8779999999996089872599963999999999987343024555557308994378-989999999753
Q gi|254780742|r 3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDAL-NIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~-d~~~l~~~~~~~ 80 (419)
.+|+|.|| |.||+.+++.|.++. . .+-..=||.++++.+.. -...+.....+..|.. -.+.+..++..+
T Consensus 80 ~~VlVvGatG~vG~~iv~~llkrg-f--~vra~VRd~~~a~~~~~------~~~~d~~~~~v~~~~~~~~d~~~~~~~~~ 150 (411)
T KOG1203 80 TTVLVVGATGKVGRRIVKILLKRG-F--SVRALVRDEQKAEDLLG------VFFVDLGLQNVEADVVTAIDILKKLVEAV 150 (411)
T ss_pred CEEEEECCCCCHHHHHHHHHHHCC-C--EEEEECCCHHHHHHHHC------CCCCCCCCCEEEECCCCCCCHHHHHHHHC
T ss_conf 749995588736399999999779-7--02342157365544432------53334442224302256541225666301
Q ss_pred C--CCEEEECCCCCCCH---------------HHHHHHHHCCCCEEEE
Q ss_conf 9--72999737610032---------------7899998628868960
Q gi|254780742|r 81 N--SQIIINVGSSFLNM---------------SVLRACIDSNVAYIDT 111 (419)
Q Consensus 81 ~--~dvVin~~~p~~~~---------------~v~~a~i~~g~hyvD~ 111 (419)
. ..+|+.|++-.-.. .++.||..+|+.=+.+
T Consensus 151 ~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vl 198 (411)
T KOG1203 151 PKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVL 198 (411)
T ss_pred CCCCEEEEECCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCEEEE
T ss_conf 345315874234778754578844216788899999999838745999
No 477
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=96.24 E-value=0.018 Score=35.48 Aligned_cols=47 Identities=23% Similarity=0.219 Sum_probs=37.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 97319998498779999999996089872599963999999999987343
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYK 50 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~ 50 (419)
|.|+|-|+|||.||+.+|+.++. .. ..+++-|++.+.+++..+.+.+
T Consensus 2 ~i~kv~ViGaG~MG~gIA~~~A~-~G--~~V~l~D~~~~~~~~~~~~i~~ 48 (307)
T COG1250 2 EIKKVAVIGAGVMGAGIAAVFAL-AG--YDVVLKDISPEALERALAYIEK 48 (307)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-CC--CCEEEEECCHHHHHHHHHHHHH
T ss_conf 74079997246020999999973-49--9569995898999999999999
No 478
>KOG1210 consensus
Probab=96.24 E-value=0.054 Score=32.21 Aligned_cols=84 Identities=17% Similarity=0.335 Sum_probs=65.7
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC-
Q ss_conf 3199984-98779999999996089872599963999999999987343024555557308994378989999999753-
Q gi|254780742|r 3 KNVLIIG-AGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT- 80 (419)
Q Consensus 3 k~ilv~G-aG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~- 80 (419)
+.|+|.| +-+.|...+..+.+... .+++..|+..|++++++.+.-..... .+....+|+.|-++....++..
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga---~Vti~ar~~~kl~~a~~~l~l~~~~~---~v~~~S~d~~~Y~~v~~~~~~l~ 107 (331)
T KOG1210 34 RHILITGGSSGLGLALALECKREGA---DVTITARSGKKLLEAKAELELLTQVE---DVSYKSVDVIDYDSVSKVIEELR 107 (331)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---CEEEEECCHHHHHHHHHHHHHHHCCC---EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 2699816841566899999997037---42999464878999874311444353---03675355302899998876323
Q ss_pred ----CCCEEEECCCCC
Q ss_conf ----972999737610
Q gi|254780742|r 81 ----NSQIIINVGSSF 92 (419)
Q Consensus 81 ----~~dvVin~~~p~ 92 (419)
-.|.+++|+|-+
T Consensus 108 ~~~~~~d~l~~cAG~~ 123 (331)
T KOG1210 108 DLEGPIDNLFCCAGVA 123 (331)
T ss_pred HCCCCCCEEEEECCCC
T ss_conf 3048950278706765
No 479
>TIGR00877 purD phosphoribosylamine--glycine ligase; InterPro: IPR000115 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) catalyzes the second step in the de novo biosynthesis of purine: ATP + 5-phosphoribosylamine + glycine = ADP + P_i + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART.; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process.
Probab=96.24 E-value=0.045 Score=32.74 Aligned_cols=97 Identities=23% Similarity=0.321 Sum_probs=71.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
.||||+|.|+=..+++..|++.+.+ ..+.++=+|.--+.--... ...++.-. |+.|.+.|.+++++.+.
T Consensus 1 MkVLviG~GGREHAla~~l~qs~~v-~~~~~apGN~Gta~~~~~~---------~~~~~~~~-~~~d~~~~~~FA~~~~i 69 (459)
T TIGR00877 1 MKVLVIGNGGREHALAWKLAQSPLV-KYVYVAPGNAGTARLAKNK---------NVAIEITK-DVRDIEALVEFAKKKKI 69 (459)
T ss_pred CEEEEECCCHHHHHHHHHHHCCCCC-CEEEEECCCCCCCCCHHHH---------HHCCCCCC-CHHHHHHHHHHHHHCCC
T ss_conf 9589974870589999987327113-3667826898622012544---------41145786-63008999999984697
Q ss_pred CEEEECCCCC--CCHHHHHHHHHCCCCEEEEC
Q ss_conf 2999737610--03278999986288689603
Q gi|254780742|r 83 QIIINVGSSF--LNMSVLRACIDSNVAYIDTA 112 (419)
Q Consensus 83 dvVin~~~p~--~~~~v~~a~i~~g~hyvD~s 112 (419)
|++| +||- +..-|+.+--++|++.+==+
T Consensus 70 dL~~--iGPE~PL~~G~vd~le~~Gi~~FGP~ 99 (459)
T TIGR00877 70 DLAV--IGPEAPLVLGLVDALEEAGIPVFGPT 99 (459)
T ss_pred CEEE--ECCCCCHHHHHHHHHHHCCCCEECCC
T ss_conf 5488--08741012014778986795145688
No 480
>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.23 E-value=0.029 Score=34.01 Aligned_cols=87 Identities=16% Similarity=0.193 Sum_probs=47.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
+|+|+|+|.|..|..++++|.+... .+++-|... . +...+++... ...... .+ .. .. +
T Consensus 6 ~K~v~V~GlG~sG~a~~~~L~~~~~---~~~~dd~~~-~-~~~~~~~~~~--------~~~~~~--~~-~~----~~--~ 63 (450)
T PRK01368 6 KQKIGVFGLGKTGISVYEELQNKYD---LIVYDDLKA-N-RDIFEELFSK--------NAIIAL--SD-SR----WQ--N 63 (450)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCC---EEEEECCCC-C-HHHHHHHHCC--------CCEECC--CC-CC----HH--C
T ss_conf 9908999587879999999971999---899989965-6-4789975214--------836025--71-11----52--1
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 72999737610032789999862886896
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYID 110 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyvD 110 (419)
+|+||-.-|=..+.++++.+.+.|+..+.
T Consensus 64 ~d~iV~SPGI~~~~p~~~~a~~~~i~i~~ 92 (450)
T PRK01368 64 LDKIVLSPGIPLTHEIVKIAKNFNIPITS 92 (450)
T ss_pred CCEEEECCCCCCCCHHHHHHHHCCCCEEE
T ss_conf 99999899619989999999987995876
No 481
>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.
Probab=96.22 E-value=0.051 Score=32.38 Aligned_cols=105 Identities=17% Similarity=0.177 Sum_probs=66.4
Q ss_pred EEEEECCCHHHHHHHHHHHHCC---CCCCEEEEEECC-------------------HHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 1999849877999999999608---987259996399-------------------999999998734302455555730
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNN---DILGDINIASRT-------------------LQKCSKIIDSIYKKKSLKIDGKLA 61 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~---~~~~~i~va~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 61 (419)
+|+|+|||++|-.++..|+--+ ....+|+|.|.| ..|++..++.+...++ ..++.
T Consensus 1 kvlvVGAGgIGCEllKnlal~G~~~~~~G~i~v~D~D~Ie~SNLnRQFLFr~~digk~Ks~vA~~~v~~~np---~~~i~ 77 (435)
T cd01490 1 KVFLVGAGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNP---DLKIT 77 (435)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCC---CCEEE
T ss_conf 989993776418999999983878689880899708847335753442756444897399999999998789---97478
Q ss_pred EEEECCCCH-HH--HHHHHHHCCCCEEEECCCCCC-CHHHHHHHHHCCCCEEEECC
Q ss_conf 899437898-99--999997539729997376100-32789999862886896036
Q gi|254780742|r 62 IHQVDALNI-KA--VVELIKKTNSQIIINVGSSFL-NMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 62 ~~~~D~~d~-~~--l~~~~~~~~~dvVin~~~p~~-~~~v~~a~i~~g~hyvD~s~ 113 (419)
..+..+... +. =.++.++ -|+|+|++--.. ..-|-+.|+.++++.+|.+-
T Consensus 78 ~~~~~v~~~te~~f~~~f~~~--~d~v~naLDNv~aR~yv~~~Cv~~~~PLiEsGT 131 (435)
T cd01490 78 ALQNRVGPETEHIFNDEFWEK--LDGVANALDNVDARMYVDRRCVYYRKPLLESGT 131 (435)
T ss_pred EECCCCCCCCCCCCCHHHHHH--CCEEEECCCCHHHHHHHHHHHHHCCCCEEECCC
T ss_conf 602545677423367767843--889998857889999999999974998374467
No 482
>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1. APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.
Probab=96.16 E-value=0.054 Score=32.19 Aligned_cols=101 Identities=8% Similarity=0.093 Sum_probs=64.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECC-------------------HHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 731999849877999999999608987259996399-------------------9999999987343024555557308
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRT-------------------LQKCSKIIDSIYKKKSLKIDGKLAI 62 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~ 62 (419)
+-+|||+|++++|..+|..|+-.+ + ..++|.|-+ ..|++..++.|...++. ..+++
T Consensus 20 ~s~VLiiG~~glG~EiaKNLvLaG-V-~svti~D~~~v~~~DLg~nFfl~~~diGk~Raea~~~~L~eLNp~---V~v~~ 94 (425)
T cd01493 20 SAHVCLLNATATGTEILKNLVLPG-I-GSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPD---VNGSA 94 (425)
T ss_pred HCCEEEECCCHHHHHHHHHHHHCC-C-CEEEEEECCCCCHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHCCC---CCEEE
T ss_conf 693999999711999998721328-9-769999599187888576615667785883999999999984786---85478
Q ss_pred EEECCCCHHHH----HHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEEC
Q ss_conf 99437898999----9999753972999737610-03278999986288689603
Q gi|254780742|r 63 HQVDALNIKAV----VELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTA 112 (419)
Q Consensus 63 ~~~D~~d~~~l----~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s 112 (419)
...+ ...+ .++++++ ++||.+--|. .-..+-+.|-++++.++-+.
T Consensus 95 ~~~~---~~~~~~~~~~~~~~f--~vVV~t~~~~~~~~~in~~cr~~~i~fI~~~ 144 (425)
T cd01493 95 VEES---PEALLDNDPSFFSQF--TVVIATNLPESTLLRLADVLWSANIPLLYVR 144 (425)
T ss_pred EECC---HHHHHHCCHHHHCCC--CEEEEECCCHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 7068---788642687675283--3899828899999999999998699789998
No 483
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.16 E-value=0.11 Score=30.20 Aligned_cols=124 Identities=13% Similarity=0.066 Sum_probs=74.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH--
Q ss_conf 731999849877999999999608987259996399999999998734302455555730899437898999999975--
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK-- 79 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-- 79 (419)
.|+|.|+|.|.||-..+..|++... +++..|.|.++.+.+.+.. .+..++.++ +-+.+.++.
T Consensus 3 ~kkI~ViGlGYVGL~~a~~lA~~G~---~Vig~D~d~~kv~~l~~g~----~p~~Ep~l~---------~ll~~~~~~~~ 66 (415)
T PRK11064 3 FETISVIGLGYIGLPTAAAFASRQK---QVIGVDINQHAVDTINRGE----IHIVEPDLD---------MVVKAAVEGGY 66 (415)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---CEEEEECCHHHHHHHHCCC----CCCCCCCHH---------HHHHHHHHCCC
T ss_conf 8879998868778999999996889---4899989999999997868----998898989---------99999986598
Q ss_pred -------CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHH
Q ss_conf -------3972999737610032789999862886896036642000014420000357751088885188699537501
Q gi|254780742|r 80 -------TNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFD 152 (419)
Q Consensus 80 -------~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~ 152 (419)
..+|+++-|+|-.... . .-.|+++.....+.+ ....+.+..+|...-+-
T Consensus 67 l~~t~~~~~ad~iiI~V~TP~~~--------~--~~~Dls~i~~a~~~I--------------~~~l~~~~lVIi~STVp 122 (415)
T PRK11064 67 LRATTTPVPADAFLIAVPTPFKG--------D--HEPDLSYVEAAAKSI--------------APVLKKGDLVILESTSP 122 (415)
T ss_pred CEEECCHHHCCEEEEECCCCCCC--------C--CCCCCCHHHHHHHHH--------------HHHCCCCCEEEECCCCC
T ss_conf 36525746789999988999789--------9--972020188899999--------------97526886799637899
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 1148899999999
Q gi|254780742|r 153 PGVVNAFARLAQD 165 (419)
Q Consensus 153 PGl~~lla~~~~~ 165 (419)
||-+.-+...+.+
T Consensus 123 pGTt~~i~~~l~~ 135 (415)
T PRK11064 123 VGATEQMAEWLAE 135 (415)
T ss_pred CCHHHHHHHHHHH
T ss_conf 9719999999998
No 484
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family; InterPro: IPR014189 Members of this family are putative quinone oxidoreductases that belong to the broader superfamily of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxidoreductases. An alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, consequently members of this entry are likely to be quinone oxidoreductases. A member of this family in Homo sapiens (Human), PIG3, is induced by p53 but is otherwise uncharacterised..
Probab=96.14 E-value=0.058 Score=31.98 Aligned_cols=97 Identities=12% Similarity=0.170 Sum_probs=67.2
Q ss_pred EEEE-ECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH-CC
Q ss_conf 1999-849877999999999608987259996399999999998734302455555730899437898999999975-39
Q gi|254780742|r 4 NVLI-IGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK-TN 81 (419)
Q Consensus 4 ~ilv-~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-~~ 81 (419)
.+|| .|++++|+.++ .|++.... ++.+.--|.||++..+++|.......+.. = +-.+.+++.-.+ .+
T Consensus 147 tvLiHGGaSGIGttAI-qLAKA~Ga--~V~~TaGS~eK~~~a~~~LGAd~aINY~e------~--DFve~~k~~t~g~kG 215 (334)
T TIGR02824 147 TVLIHGGASGIGTTAI-QLAKAFGA--RVFTTAGSDEKCATACEALGADIAINYRE------E--DFVEVVKEETGGGKG 215 (334)
T ss_pred EEEEEECCCCHHHHHH-HHHHHCCC--EEEEEECCHHHHHHHHHHCCCEEEEECCC------C--CHHHHHHHHCCCCCC
T ss_conf 2899713673679999-99985697--59998289899999998609807860777------3--479999982689985
Q ss_pred CCEEEECCCCCCC-HHHHHHHHHCCCCEEEECC
Q ss_conf 7299973761003-2789999862886896036
Q gi|254780742|r 82 SQIIINVGSSFLN-MSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 82 ~dvVin~~~p~~~-~~v~~a~i~~g~hyvD~s~ 113 (419)
.|||++.+|-.|= -++. |+...-|.|-|+.
T Consensus 216 vDVILD~vGg~Yl~~N~~--alA~dGRlV~Ig~ 246 (334)
T TIGR02824 216 VDVILDIVGGSYLARNIK--ALALDGRLVQIGF 246 (334)
T ss_pred CCEEEECCCHHHHHHHHH--HHHCCCCEEEEEC
T ss_conf 317985776688998999--9840793999850
No 485
>pfam01564 Spermine_synth Spermine/spermidine synthase. Spermine and spermidine are polyamines. This family includes spermidine synthase that catalyses the fifth (last) step in the biosynthesis of spermidine from arginine, and spermine synthase.
Probab=96.11 E-value=0.11 Score=30.03 Aligned_cols=81 Identities=15% Similarity=0.133 Sum_probs=54.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
|+|||+|+|- ..+++.+.++... .++++.+.|++-.+...+-++..+....++|++...-|... -+++.-. +-
T Consensus 77 k~VLIiGGGD--G~~~rEvlk~~~v-~~v~~VEiD~~Vv~~~~~~lp~~~~~~~dprv~l~~~Dg~~--~l~~~~~--~y 149 (240)
T pfam01564 77 KKVLIIGGGD--GGALREVVKHPSV-EKITLVEIDEKVIEFSKKFLPSLAGGFDDPRVKVVIGDGFK--FLKDYLV--KF 149 (240)
T ss_pred CEEEEECCCC--HHHHHHHHCCCCC-CEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHH--HHHHCCC--CC
T ss_conf 5367645865--7999998567995-38999757889999999987985243479855999816899--9985725--44
Q ss_pred CEEEECCC
Q ss_conf 29997376
Q gi|254780742|r 83 QIIINVGS 90 (419)
Q Consensus 83 dvVin~~~ 90 (419)
|+||.-+.
T Consensus 150 DvII~D~~ 157 (240)
T pfam01564 150 DVIIVDST 157 (240)
T ss_pred CEEEEECC
T ss_conf 58999589
No 486
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.10 E-value=0.11 Score=30.01 Aligned_cols=130 Identities=20% Similarity=0.248 Sum_probs=78.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH-HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 7319998498779999999996089872599963999-999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL-QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
+-+|||+|+|.|+..=+..|.+... .++|..-+. +.++++++ ..++...+-+. +++. +.
T Consensus 24 klkvLVVGGG~VA~RKi~~Ll~agA---~VtVVSP~~~~el~~L~~----------~~~I~~i~r~y-~~~d----L~-- 83 (222)
T PRK05562 24 KIKVLVIGGGKAAFIKGKTFLKKGC---YVEILSKEFSKEFLDLKK----------YGNLKLIKGNY-DKEF----IK-- 83 (222)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEECCCCCHHHHHHHH----------CCCEEEEECCC-CHHH----CC--
T ss_conf 7669999987999999999987899---899987866889999997----------59869996867-9778----08--
Q ss_pred CCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
Q ss_conf 972999737610-0327899998628868960366420000144200003577510888851886995375011148899
Q gi|254780742|r 81 NSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGVVNAF 159 (419)
Q Consensus 81 ~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl~~ll 159 (419)
+.++||.+..-. .+..|.+.|-+.+.-+.+... +......-|.-+. +..=+.+|...|-+|.++-.+
T Consensus 84 ~~~LVIaATdd~~lN~~I~~~a~~~~ilvNvvdd--p~~~~fi~Paiv~----------Rg~L~IAIST~G~SP~lAr~i 151 (222)
T PRK05562 84 DKHLIIIATDDEELNNKIRKHCDRLYKLYIDCSD--FKKGLCVIPYQRS----------SKNMVFALNTKGGSPKTSVFI 151 (222)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHCCEEEECCC--CCCCCEEECEEEE----------ECCEEEEEECCCCCHHHHHHH
T ss_conf 8739999479889999999999980998898578--8768179770997----------289799998999897999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780742|r 160 ARLA 163 (419)
Q Consensus 160 a~~~ 163 (419)
-..+
T Consensus 152 R~kl 155 (222)
T PRK05562 152 GEKV 155 (222)
T ss_pred HHHH
T ss_conf 9999
No 487
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=96.09 E-value=0.014 Score=36.25 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=35.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHH
Q ss_conf 31999849877999999999608987259996399999999998734
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIY 49 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~ 49 (419)
++|-|+|+|.||+.|+..++... .++++.|+|.+.+++-...+.
T Consensus 314 ~~v~ViGaG~MG~GIA~~~a~aG---~~V~l~D~~~e~l~~g~~~~~ 357 (715)
T PRK11730 314 KQAAVLGAGIMGGGIAYQSASKG---VPVIMKDINQKALDLGMNEAA 357 (715)
T ss_pred CEEEEECCCCCHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHH
T ss_conf 27999787710799999999579---957999789999999999999
No 488
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase; InterPro: IPR005676 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway. Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see . Aspartate-semialdehyde dehydrogenase, the second enzyme in the aspartate pathway, converts aspartyl phosphate to aspartate-semialdehyde, the branch point intermediate between the lysine and threonine/methionine pathways. Based on sequence alignments, the aspartate-semialdehyde dehydrogenase family appears to have two distinct subgroups, one found in most bacteria (Gram-positve and Gram-negative), while the other is found primarily in organisms lacking peptidoglycan (archaea,fungi and some bacteria). Most studies have been performed on enzymes isolated from Gram-negative bacteria , , , . The N-terminal domain forms the active site and NADP-binding pocket, while C-terminal domain is primarily involved in hydrophobic intersubunit contacts. The catalytic mechanism involves the formation of a covalent thioester acyl-enzyme intermediate mediated through nucleophilic attack by an active site cysteine residue on the substrate aspartyl phosphate. Release of inorganic phosphate is followed by hydride transfer from NADPH to yield the product. The recently described archaeal structure suggests that the two subgroups of aspartate semi-aldehyde dehydrogenase share similar structures and have an identical catalytic mechanism, despite their relatively low sequence identity . Unlike the bacterial enzymes, the archaeal enzyme utilised both NAD and NADP as cofactor. This entry represents the subgroup of aspartate dehydrogenases found primarily in organisms lacking peptidoglycan. In addition to its role in aspartate metabolism, the enzyme from Sulfolobus solfataricus has been shown recently to exhibit RNase activity, suggesting that these enzymes may perform additional cellular functions .; GO: 0004073 aspartate-semialdehyde dehydrogenase activity, 0009086 methionine biosynthetic process, 0009088 threonine biosynthetic process.
Probab=96.09 E-value=0.0087 Score=37.57 Aligned_cols=106 Identities=11% Similarity=0.114 Sum_probs=64.1
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH--HCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 1999849-8779999999996089872599963999999999987343--024555557308994378989999999753
Q gi|254780742|r 4 NVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYK--KKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 4 ~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
||-|+|| |.||+..++.|..|+.++.--.|+.-+.+..+...+-+.. ...-..+.-++- +-+..++.. +++.++
T Consensus 2 ~VavLGaTG~VGq~f~~lL~~HPr~Fe~~~v~AS~~saGk~Yge~~~W~~~~~g~~Pe~~~d--l~i~~~~p~-ri~~d~ 78 (358)
T TIGR00978 2 RVAVLGATGLVGQKFVKLLEKHPRYFELAKVVASERSAGKRYGEVVKWREILSGDIPEEVRD--LEIVETEPV-RIAEDH 78 (358)
T ss_pred EEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHCC--CEEECCCCC-EEEECC
T ss_conf 68997065546899999975269812288988368655767445430121236858432347--654134743-356617
Q ss_pred -CCCEEEECCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf -97299973761003278999986288689603
Q gi|254780742|r 81 -NSQIIINVGSSFLNMSVLRACIDSNVAYIDTA 112 (419)
Q Consensus 81 -~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s 112 (419)
..|+|.|++|......|=+.|+++|.+.+.=+
T Consensus 79 ~dVD~vfSALp~~~A~~~E~~la~~G~~VfSNA 111 (358)
T TIGR00978 79 KDVDIVFSALPSEVAEEVEPKLAEEGIIVFSNA 111 (358)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEECC
T ss_conf 982699814997999999999985698898768
No 489
>PRK00811 spermidine synthase; Provisional
Probab=96.07 E-value=0.12 Score=29.93 Aligned_cols=81 Identities=17% Similarity=0.156 Sum_probs=51.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCC-CCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 73199984987799999999960898725999639999999999873430245-55557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSL-KIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
-|+|||+|+|-=| +++.+.++..+ .++++.+.|++-.+...+-++..+.. ..++|++...-|... -+++ .++
T Consensus 79 pk~VLIiGGGDGg--~~rE~lkh~~v-~~v~~VeiD~~Vi~~~~~~lp~~~~~~~~dprv~~~~~Dg~~--fv~~-~~~- 151 (283)
T PRK00811 79 PKKVLIIGGGDGG--TLREVLKHPSV-EKITMVEIDERVVEMSRKYLPEISGGAWDDPRVELVIGDGVK--FVRE-TEN- 151 (283)
T ss_pred CCEEEEECCCCHH--HHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH--HHHH-CCC-
T ss_conf 7748995687479--99998427885-679999468999999999838863133029715998278999--9984-523-
Q ss_pred CCCEEEECC
Q ss_conf 972999737
Q gi|254780742|r 81 NSQIIINVG 89 (419)
Q Consensus 81 ~~dvVin~~ 89 (419)
+-|++|.-.
T Consensus 152 ~yDvII~D~ 160 (283)
T PRK00811 152 SFDVIIVDS 160 (283)
T ss_pred CCCEEEEEC
T ss_conf 554899808
No 490
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=96.05 E-value=0.064 Score=31.70 Aligned_cols=123 Identities=11% Similarity=0.047 Sum_probs=68.7
Q ss_pred EEEEECCCHH-HHHHHHHHHHCCCC--CCEEEEEECC-HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 1999849877-99999999960898--7259996399-999999998734302455555730899437898999999975
Q gi|254780742|r 4 NVLIIGAGGV-AHVVAHKCAQNNDI--LGDINIASRT-LQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 4 ~ilv~GaG~v-G~~~~~~L~~~~~~--~~~i~va~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
||.++|||++ -..++..|+...+. ..+|++.|.| ++|++.+.+-..+ ........+++.. ...+++.++
T Consensus 2 KI~iIGaGS~~tp~lv~~l~~~~~~l~~~ei~L~DID~~~rL~~~~~la~~-~~~~~~~~~~v~~-----ttd~~eAl~- 74 (419)
T cd05296 2 KLTIIGGGSSYTPELIEGLIRRYEELPVTELVLVDIDEEEKLEIVGALAKR-MVKKAGLPIKVHL-----TTDRREALE- 74 (419)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH-HHHHHCCCEEEEE-----ECCHHHHHC-
T ss_conf 799989746655899999984543489888999899859999999999999-9996099808999-----679999836-
Q ss_pred CCCCEEEECCCCC-CCHHH--HHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHH
Q ss_conf 3972999737610-03278--9999862886896036642000014420000357751
Q gi|254780742|r 80 TNSQIIINVGSSF-LNMSV--LRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSL 134 (419)
Q Consensus 80 ~~~dvVin~~~p~-~~~~v--~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l 134 (419)
++|.|||+.-+- +.... .+..+++|+---|++|-....+.+.+.+.+.+.....
T Consensus 75 -gADfVi~~irvGg~~~r~~De~Ip~kyGvigQET~G~GG~~~alRtiP~~l~ia~~i 131 (419)
T cd05296 75 -GADFVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDV 131 (419)
T ss_pred -CCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf -999999987337930767765438764976534767479998762289999999999
No 491
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=96.04 E-value=0.12 Score=29.84 Aligned_cols=147 Identities=16% Similarity=0.049 Sum_probs=93.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 97319998498779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|..+|-|+|.|.||-+.+-..+++.- +++=-|.|..+-+.+.+.-. .+ .+..+.+-+++.++.-
T Consensus 8 ~~~~I~ViGLGYVGLPlA~~fA~~G~---~ViG~DIn~~~Vd~ln~G~~-----------~i--~e~~~~~~v~~~v~~g 71 (436)
T COG0677 8 MSATIGVIGLGYVGLPLAAAFASAGF---KVIGVDINQKKVDKLNRGES-----------YI--EEPDLDEVVKEAVESG 71 (436)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHCCC---CEEEEECCHHHHHHHHCCCC-----------EE--ECCCHHHHHHHHHHCC
T ss_conf 75289998246445788999987699---55757578899888757864-----------25--4686889999998639
Q ss_pred ------------CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
Q ss_conf ------------97299973761003278999986288689603664200001442000035775108888518869953
Q gi|254780742|r 81 ------------NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILG 148 (419)
Q Consensus 81 ------------~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~ 148 (419)
.||+.|-|+|-.+.. -+=.|+++..+..+.+ ....++|-.+|.+
T Consensus 72 ~lraTtd~~~l~~~dv~iI~VPTPl~~----------~~~pDls~v~~aa~sI--------------a~~L~kG~LVIlE 127 (436)
T COG0677 72 KLRATTDPEELKECDVFIICVPTPLKK----------YREPDLSYVESAARSI--------------APVLKKGDLVILE 127 (436)
T ss_pred CCEEECCHHHCCCCCEEEEEECCCCCC----------CCCCCHHHHHHHHHHH--------------HHHCCCCCEEEEE
T ss_conf 715756855625488899993577678----------9998848999999999--------------9756778889996
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
Q ss_conf 750111488999999997436663897630247888866
Q gi|254780742|r 149 AGFDPGVVNAFARLAQDEYFDKITDIDIIDVNAGKHDKY 187 (419)
Q Consensus 149 ~G~~PGl~~lla~~~~~~~~d~~~~i~~~~~~~~~~~~~ 187 (419)
.-.-||-+.=++....+...+=.-..+++.++++..--+
T Consensus 128 ST~~PGTTe~v~~plle~~sgL~~~~Df~laysPERv~P 166 (436)
T COG0677 128 STTPPGTTEEVVKPLLEERSGLKFGEDFYLAYSPERVLP 166 (436)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
T ss_conf 478998578889999850689765640468607332189
No 492
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent; InterPro: IPR011275 This entry contains bacterial and archaeal malate dehydrogenases, which convert malate into oxaloacetate in the citric acid cycle. The critical residues which discriminate malate dehydrogenase from lactate dehydrogenase have been characterised , and have been used to determine members of this group. ; GO: 0030060 L-malate dehydrogenase activity, 0006108 malate metabolic process.
Probab=96.01 E-value=0.01 Score=37.02 Aligned_cols=94 Identities=20% Similarity=0.296 Sum_probs=56.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCC-----CCCCCCEEEEECCCCHHHHHHH
Q ss_conf 73199984987799999999960898725999639999999999873430245-----5555730899437898999999
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSL-----KIDGKLAIHQVDALNIKAVVEL 76 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~D~~d~~~l~~~ 76 (419)
+|||=|+|||+||+.+|..||+. +-.-+++|-|.-. .+.+++-.+. ..-..|.+..-=-+|.+..+
T Consensus 1 RkKisvIGAGfvGaTTAf~lA~K-eLard~VLlDiPq------vEg~pqGKALDmyEasPv~gFD~kvTGtnnYaDTA-- 71 (308)
T TIGR01763 1 RKKISVIGAGFVGATTAFLLAEK-ELARDVVLLDIPQ------VEGVPQGKALDMYEASPVEGFDVKVTGTNNYADTA-- 71 (308)
T ss_pred CCEEEEECCCCCHHHHHHHHHHH-HHCCEEEEEEECC------CCCCCCCCHHHHHHCCCCCCCCCEEECCCCCHHHC--
T ss_conf 95589970686125899999867-4067168985055------58688863322110277663112362578700211--
Q ss_pred HHHCCCCEEEECCCCC------------CCHHHHHHHHHCCCCE
Q ss_conf 9753972999737610------------0327899998628868
Q gi|254780742|r 77 IKKTNSQIIINVGSSF------------LNMSVLRACIDSNVAY 108 (419)
Q Consensus 77 ~~~~~~dvVin~~~p~------------~~~~v~~a~i~~g~hy 108 (419)
++|+|+-++|-. .|..|++.|+..=..|
T Consensus 72 ----nSDivViTaG~pRKPGMsReDL~s~Na~I~R~v~~~i~~~ 111 (308)
T TIGR01763 72 ----NSDIVVITAGLPRKPGMSREDLVSVNADIVREVTSRIVEY 111 (308)
T ss_pred ----CCCEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHC
T ss_conf ----8837998167887547887899861334689999999731
No 493
>pfam02558 ApbA Ketopantoate reductase PanE/ApbA. This is a family of 2-dehydropantoate 2-reductases also known as ketopantoate reductases, EC:1.1.1.169. The reaction catalysed by this enzyme is: (R)-pantoate + NADP(+) <= 2-dehydropantoate + NADPH. AbpA catalyses the NADPH reduction of ketopantoic acid to pantoic acid in the alternative pyrimidine biosynthetic (APB) pathway. ApbA and PanE are allelic. ApbA, the ketopantoate reductase enzyme is required for the synthesis of thiamine via the APB biosynthetic pathway.
Probab=96.00 E-value=0.035 Score=33.46 Aligned_cols=86 Identities=16% Similarity=0.224 Sum_probs=47.5
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE
Q ss_conf 99984987799999999960898725999639999999999873430245555573089943789899999997539729
Q gi|254780742|r 5 VLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQI 84 (419)
Q Consensus 5 ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dv 84 (419)
|+|+|+|.||+..+.+|++.. .++++.+|.. +++.+.+.--..... .........-..+... . ...+|+
T Consensus 1 I~IiGaGaiG~~~a~~L~~ag---~~V~lv~R~~-~~~~i~~~G~~~~~~--~~~~~~~~~~~~~~~~---~--~~~~D~ 69 (150)
T pfam02558 1 IAILGAGAVGSLYGARLARAG---HDVTLIARGR-HLEAIRENGLRITSP--GGERTVPPPVATSASE---E--LGPADL 69 (150)
T ss_pred CEEECCCHHHHHHHHHHHHCC---CEEEEEECCC-HHHHHHHCCEEEEEC--CCCEEEECCEECCCHH---H--CCCCCE
T ss_conf 999966899999999999779---9289997563-678877497699947--9838980741038657---6--588679
Q ss_pred EEECCCCCCCHHHHHHH
Q ss_conf 99737610032789999
Q gi|254780742|r 85 IINVGSSFLNMSVLRAC 101 (419)
Q Consensus 85 Vin~~~p~~~~~v~~a~ 101 (419)
||-|+-.+.....++..
T Consensus 70 viv~vKa~~~~~al~~l 86 (150)
T pfam02558 70 VIVAVKAYQTAEALEDL 86 (150)
T ss_pred EEEEECCCCHHHHHHHH
T ss_conf 99972245889999998
No 494
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=95.98 E-value=0.044 Score=32.82 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=28.8
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHH
Q ss_conf 199984987799999999960898725999639999
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQ 39 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~ 39 (419)
|+||+|||..|..++++|.+.. + .+|++.|++.-
T Consensus 1 kvLllGaGtLGc~var~L~~~G-V-~~it~VD~~~V 34 (307)
T cd01486 1 KCLLLGAGTLGCNVARNLLGWG-V-RHITFVDSGKV 34 (307)
T ss_pred CEEEECCCCCCHHHHHHHHHHC-C-CEEEEEECCEE
T ss_conf 9799857752069999999836-9-85899849988
No 495
>PRK05225 ketol-acid reductoisomerase; Validated
Probab=95.98 E-value=0.028 Score=34.11 Aligned_cols=81 Identities=20% Similarity=0.252 Sum_probs=56.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.|+|+|+|+|.-|..-+..| +.+. .+++++=|..+-.++-..+..... .++++ ....+++. .
T Consensus 37 gKkI~IiG~GsQG~aqaLNl-RDSG--ldV~~~LR~~si~~k~~Sw~~A~~-----~Gf~V--------~t~eeai~--~ 98 (489)
T PRK05225 37 GKKIVIVGCGAQGLNQGLNM-RDSG--LDISYALRKEAIAEKRASWRKATE-----NGFKV--------GTYEELIP--Q 98 (489)
T ss_pred CCEEEEECCCHHHHHHHCCC-CCCC--CCEEEEECCCHHHHHHHHHHHHHH-----CCCCC--------CCHHHHHH--C
T ss_conf 88599980365877765244-1058--856999555303341667999997-----79964--------67899732--3
Q ss_pred CCEEEECCCCCCCHHHHHH
Q ss_conf 7299973761003278999
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRA 100 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a 100 (419)
+|+|+|+.|..++..|.+.
T Consensus 99 ADvV~~LtPD~q~~~v~~~ 117 (489)
T PRK05225 99 ADLVVNLTPDKQHSDVVRA 117 (489)
T ss_pred CCEEEEECCCCCHHHHHHH
T ss_conf 5878870885514899999
No 496
>PRK07729 glyceraldehyde-3-phosphate dehydrogenase; Validated
Probab=95.96 E-value=0.12 Score=29.76 Aligned_cols=108 Identities=16% Similarity=0.194 Sum_probs=68.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCC-CCCCCC------------EEEEECC
Q ss_conf 973199984987799999999960898725999639999999999873430245-555573------------0899437
Q gi|254780742|r 1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSL-KIDGKL------------AIHQVDA 67 (419)
Q Consensus 1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~-~~~~~~------------~~~~~D~ 67 (419)
|+-+|-|-|-|.+||.+.+.+..+.+. .-+.|-|. ...+.++--|..-+.. .....+ ++.....
T Consensus 1 M~irIgINGFGRIGR~v~R~~~~~~~i-~vvaINd~--~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~v~g~~I~~~~~ 77 (343)
T PRK07729 1 MKVRVAINGFGRIGRMVFRQAIKESAF-EIVAINAS--YPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVNGKKIRLLNN 77 (343)
T ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCC-EEEEECCC--CCHHHHHHHHCCCCCCCCCCCCEEECCCEEEECCEEECCCCC
T ss_conf 967999978886899999999668998-89998489--998999997585277898899789719979999975012366
Q ss_pred CCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf 8989999999753972999737610032789999862886896036
Q gi|254780742|r 68 LNIKAVVELIKKTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 68 ~d~~~l~~~~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~ 113 (419)
.|++++. -++.+.|+||-|.|-|....-++.-+++|+.-|=+|.
T Consensus 78 ~dp~~i~--W~~~gvD~ViE~TG~f~~~e~a~~Hl~~GakkViiSA 121 (343)
T PRK07729 78 RDPKELP--WTDLGIDIVIEATGKFNSKEKAILHVEAGAKKVILTA 121 (343)
T ss_pred CCHHHCC--CCCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECC
T ss_conf 9967788--4103884999747556788999988854986799888
No 497
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein; InterPro: IPR014182 Members of this entry form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases. Some current members of this entry carry designations as putative alginate lyase, however none have been characterised as such..
Probab=95.93 E-value=0.034 Score=33.58 Aligned_cols=77 Identities=21% Similarity=0.277 Sum_probs=41.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9731999849-877999999999608987259996399999999998734302455555730899437898999999975
Q gi|254780742|r 1 MKKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKK 79 (419)
Q Consensus 1 M~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~ 79 (419)
|+..|||+|+ |||||.+++ |++..--.+-|.=|.|=+++ +. +++
T Consensus 150 ~~~~lLIiGgAGGVGSI~iQ-LAR~LT~ltVIaTASRpEs~------------------------------~W----v~~ 194 (338)
T TIGR02817 150 AKRALLIIGGAGGVGSILIQ-LARQLTGLTVIATASRPESQ------------------------------EW----VLE 194 (338)
T ss_pred CCCEEEEECCCCCHHHHHHH-HHHHHCCCEEEEECCCHHHH------------------------------HH----HHH
T ss_conf 88747897388517899999-99985496499972857899------------------------------99----997
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf 3972999737610032789999862886896036
Q gi|254780742|r 80 TNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAI 113 (419)
Q Consensus 80 ~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~ 113 (419)
.+++.||+=.=| +..++-+.-++.=.|.+.++.
T Consensus 195 LGAH~VIDHskP-L~~ql~~L~l~~v~~V~SlT~ 227 (338)
T TIGR02817 195 LGAHHVIDHSKP-LKAQLEKLGLEAVSYVFSLTH 227 (338)
T ss_pred CCCCEEECCCCC-HHHHHHHHCCCCCCEEECCCH
T ss_conf 399188658843-689999828899855751660
No 498
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.89 E-value=0.078 Score=31.11 Aligned_cols=128 Identities=14% Similarity=0.126 Sum_probs=80.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHH-HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849877999999999608987259996399999-9999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQK-CSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
|-++-|+|.|.+|.=...++.+ ++...-..++|||++. .-+.+++++ +.+ ..+.+..++...
T Consensus 1 k~~vAIiGsGnIGtDLm~Ki~r-S~~le~~~~vG~dp~S~GL~rA~~lG----------v~~------s~~Gid~ll~~~ 63 (285)
T TIGR03215 1 KVKVAIIGSGNIGTDLMYKLLR-SEHLEMVAMVGIDPESDGLARARELG----------VKT------SAEGVDGLLANP 63 (285)
T ss_pred CCEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEECCCCCHHHHHHHHCC----------CCC------CCCCHHHHHHCC
T ss_conf 9369998998338999999866-78721699982488982899999849----------966------376889896099
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCC-CHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHH
Q ss_conf 972999737610032789999862886896036642-000014420000357751088885188699537501114
Q gi|254780742|r 81 NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHES-PLKICESPPWYNNYEWSLLDECRTKSITAILGAGFDPGV 155 (419)
Q Consensus 81 ~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~~-~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~PGl 155 (419)
..|+|.++...+.|..-++..-+.|+..||++-.-- ++. .+. .-+++...+.++-+|..-|-+..+
T Consensus 64 ~idiVFDATSA~aH~~h~~~l~~~g~~~IDLTPAaiGp~~--VP~-------VNl~~~l~~~NvNMVTCGGQAtiP 130 (285)
T TIGR03215 64 DIDIVFDATSAKAHARHARLLAELGKIVIDLTPAAIGPYV--VPA-------VNLDEHLDAPNVNMVTCGGQATIP 130 (285)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEE--ECC-------CCHHHHCCCCCCCEEEECCCCCCH
T ss_conf 9788996698467999999999759979978810159754--555-------387895468886337655843018
No 499
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.88 E-value=0.09 Score=30.70 Aligned_cols=91 Identities=8% Similarity=0.032 Sum_probs=52.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
.|+|+|+|.|..|..+++.|.++... .++..+.+.+..+... .+.. .......+.. .+. +. .
T Consensus 8 gkkv~V~GlG~sG~aaa~~L~~~g~~--~~v~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~-~~~----l~--~ 69 (468)
T PRK04690 8 GKRVALWGWGREGRAAYRALRAQLPA--QPLTVFCNAEEVREVG-ALAD--------AALLVETEAS-AQR----LA--A 69 (468)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCCE--EEEEECCCCCCCHHHH-HHCC--------CCCEEECCCC-HHH----HH--C
T ss_conf 79799983478799999999966990--4999728832464667-6204--------5756746778-557----61--4
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 72999737610032789999862886896
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYID 110 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyvD 110 (419)
+|+||-.=|=....++++.+.+.|+..+.
T Consensus 70 ~d~vv~SPGi~~~~p~~~~a~~~~i~i~~ 98 (468)
T PRK04690 70 FEVVVKSPGISPYRPEALAAAAQGTPFIG 98 (468)
T ss_pred CCEEEECCCCCCCCHHHHHHHHCCCCEEE
T ss_conf 88999899579868999999987994886
No 500
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=95.87 E-value=0.039 Score=33.12 Aligned_cols=85 Identities=9% Similarity=0.128 Sum_probs=45.6
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC-CCCHHHHHHHHHHCCC
Q ss_conf 199984987799999999960898725999639999999999873430245555573089943-7898999999975397
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVD-ALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D-~~d~~~l~~~~~~~~~ 82 (419)
||+|+|+|.||+..+.+|++... ++++..|+ ++++++.+.=-..... ..-...... +.+++.. .+ .+
T Consensus 2 kI~I~GaGAiG~~~a~~L~~~g~---~V~lv~r~-~~~~~i~~~Gl~i~~~---~~~~~~~~~~~~~~~~~----~~-~~ 69 (306)
T PRK12921 2 KIAVVGAGAVGGTFGARLLEAGR---DVTFLGRS-ARAEALREKGLVIRSD---HGDVTVPGPVITDPEEI----TG-PF 69 (306)
T ss_pred EEEEECCCHHHHHHHHHHHHCCC---CEEEEEEC-CHHHHHHHCCEEEEEC---CCEEEEECCCCCCCHHH----CC-CC
T ss_conf 89999924999999999983699---88999700-0999999789699977---97699806105080565----68-97
Q ss_pred CEEEECCCCCCCHHHHHH
Q ss_conf 299973761003278999
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRA 100 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a 100 (419)
|+||-|+=.+....+++.
T Consensus 70 D~viva~Ks~~~~~a~~~ 87 (306)
T PRK12921 70 DLVILAVKAYQLDAAIPD 87 (306)
T ss_pred CEEEEEECCCCHHHHHHH
T ss_conf 689997045677999999
Done!