HHsearch alignment for GI: 254780742 and conserved domain: pfam00056
>pfam00056 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain. L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold.
Probab=97.20 E-value=0.0013 Score=43.21 Aligned_cols=79 Identities=14% Similarity=0.232 Sum_probs=54.3
Q ss_pred EEEEECCC-HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 19998498-77999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGAG-GVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~GaG-~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
T Consensus 2 KV~IIGagg~VG~~~A~~l~~~~-l~~elvL~D~~~~~a~g~alDl~~~~~~~--~~~~~~~--~~~~~----~~~--da 70 (142)
T pfam00056 2 KVAVVGAGGGVGSSLAFALALQG-LADELVLVDINKDKAEGVAMDLSHGSTFL--SVPGIVG--GDDYE----ALK--DA 70 (142)
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-CCCEEEEECCCCCCCHHHHHHHHCCCCCC--CCCEEEC--CCCHH----HHC--CC
T ss_conf 89998987789999999997479-66347885057764117999986144347--8876974--88388----837--89
Q ss_pred CEEEECCCCCC
Q ss_conf 29997376100
Q gi|254780742|r 83 QIIINVGSSFL 93 (419)
Q Consensus 83 dvVin~~~p~~ 93 (419)
T Consensus 71 DiVVitaG~~~ 81 (142)
T pfam00056 71 DVVVITAGVPR 81 (142)
T ss_pred CEEEEECCCCC
T ss_conf 99998157778