HHsearch alignment for GI: 254780742 and conserved domain: pfam06408

>pfam06408 consensus.
Probab=99.56  E-value=4.2e-12  Score=100.54  Aligned_cols=239  Identities=16%  Similarity=0.191  Sum_probs=147.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCC-CCEEEEEECCHHHHH-HHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf             3199984987799999999960898-725999639999999-99987343024555557308994378989999999753
Q gi|254780742|r    3 KNVLIIGAGGVAHVVAHKCAQNNDI-LGDINIASRTLQKCS-KIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT   80 (419)
Q Consensus         3 k~ilv~GaG~vG~~~~~~L~~~~~~-~~~i~va~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~   80 (419)
T Consensus         2 g~Iv~iGfGSIgq~~LPLl~rH~~~~~~~Itiid~~d~~~~~~~~~~----------~Gi~fi~~~l-T~eNy~~~L~~~   70 (471)
T pfam06408         2 GPILMIGFGSIGRGTLPLIERHFKFDRSNIVVIDPRDTKKDRKLLAE----------KGIRFVQTAV-TKDNYKNVLDPL   70 (471)
T ss_pred             CCEEEECCCHHHHHHHHHHHHHCCCCHHHEEEECCCCCHHHHHHHHH----------CCCEEEECCC-CHHHHHHHHHHH
T ss_conf             97799875716742067888760788789899767875456677875----------6976886145-878899999998


Q ss_pred             -----CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCC--CCHH------CCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf             -----97299973761003278999986288689603664--2000------0144200003577510888851886995
Q gi|254780742|r   81 -----NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHE--SPLK------ICESPPWYNNYEWSLLDECRTKSITAIL  147 (419)
Q Consensus        81 -----~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~--~~~~------~~~~~~~~~~~~~~l~~~a~~ag~~~i~  147 (419)
T Consensus        71 L~~gg~gdflvnLSvniss~~ii~~C~e~GvlYldT~iEpW~g~y~d~~~~p~~RTnYalre~~r~~~~~~-~~GpTAv~  149 (471)
T pfam06408        71 LKGGGGQGFCVNLSVDTSSLDLMRLCREHGVLYVDTVVEPWLGFYFDADADNEARTNYALRETVRELKRDW-PGGPTAVS  149 (471)
T ss_pred             HHCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC-CCCCEEEE
T ss_conf             62677788799801157889999999980987755440356886667779855666699999999999657-99980777


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCC------------------------CCEEEEEECCCC--CCCC---CCCCCCCHHHHH
Q ss_conf             37501114889999999974366------------------------638976302478--8886---665425689988
Q gi|254780742|r  148 GAGFDPGVVNAFARLAQDEYFDK------------------------ITDIDIIDVNAG--KHDK---YFATNFDAEINL  198 (419)
Q Consensus       148 ~~G~~PGl~~lla~~~~~~~~d~------------------------~~~i~~~~~~~~--~~~~---~~~~~~s~~~~l  198 (419)
T Consensus       150 ~hGANPGlVShfvKqaLldiA~~~~~~~~~p~~~~r~~wa~LA~~LgVkvIHiaERDTQ~s~~PK~~~eFvNTWSveGF~  229 (471)
T pfam06408       150 TCGANPGMVSWFVKQALVDLAADLGLDNSEPSNDDREGWAKLAKKLGVKGIHIAERDTQRASDPKPVNEFVNTWSVEGFI  229 (471)
T ss_pred             ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCHHHHH
T ss_conf             46899518999999999999998644567887413688999999829958995141132347899889445466211146


Q ss_pred             HHCCCCEEEE---------------ECC---EEEEECCCCCCEEEE-CCCCCCCEEEEECCCCHHHHHHCCCCC
Q ss_conf             6225982999---------------999---589954677526897-788776403640484234565348663
Q gi|254780742|r  199 REFTGVVYSW---------------QKN---QWCVNKMFEISRTYD-LPTVGQHKVYLSGHDEIHSLFKNIQGA  253 (419)
Q Consensus       199 ~~~~~~~~~~---------------~~G---~~~~~~~~~~~~~~~-fp~~g~~~~~~~~~~e~~tl~~~~~~~  253 (419)
T Consensus       230 ~EG~qPAElGWGTHE~~~P~~a~~h~~G~~~~I~l~~pG~~T~VrSW~P~~g~~~G~lI~H~Ea~sI~d~lTv~  303 (471)
T pfam06408       230 EEGLQPAELGWGTHETWMPKNAKKHKKGPKAAIYLPQPGANTRVRSWCPTLGAQYGFLVTHNEAISISDFLTVR  303 (471)
T ss_pred             HHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCEEHHHEEEEC
T ss_conf             53675242053346543687764478898746887488646469875589885267998556301520236742