HHsearch alignment for GI: 254780742 and conserved domain: pfam06408
>pfam06408 consensus.
Probab=99.56 E-value=4.2e-12 Score=100.54 Aligned_cols=239 Identities=16% Similarity=0.191 Sum_probs=147.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCC-CCEEEEEECCHHHHH-HHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 3199984987799999999960898-725999639999999-99987343024555557308994378989999999753
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDI-LGDINIASRTLQKCS-KIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~-~~~i~va~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
T Consensus 2 g~Iv~iGfGSIgq~~LPLl~rH~~~~~~~Itiid~~d~~~~~~~~~~----------~Gi~fi~~~l-T~eNy~~~L~~~ 70 (471)
T pfam06408 2 GPILMIGFGSIGRGTLPLIERHFKFDRSNIVVIDPRDTKKDRKLLAE----------KGIRFVQTAV-TKDNYKNVLDPL 70 (471)
T ss_pred CCEEEECCCHHHHHHHHHHHHHCCCCHHHEEEECCCCCHHHHHHHHH----------CCCEEEECCC-CHHHHHHHHHHH
T ss_conf 97799875716742067888760788789899767875456677875----------6976886145-878899999998
Q ss_pred -----CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCC--CCHH------CCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf -----97299973761003278999986288689603664--2000------0144200003577510888851886995
Q gi|254780742|r 81 -----NSQIIINVGSSFLNMSVLRACIDSNVAYIDTAIHE--SPLK------ICESPPWYNNYEWSLLDECRTKSITAIL 147 (419)
Q Consensus 81 -----~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~~~--~~~~------~~~~~~~~~~~~~~l~~~a~~ag~~~i~ 147 (419)
T Consensus 71 L~~gg~gdflvnLSvniss~~ii~~C~e~GvlYldT~iEpW~g~y~d~~~~p~~RTnYalre~~r~~~~~~-~~GpTAv~ 149 (471)
T pfam06408 71 LKGGGGQGFCVNLSVDTSSLDLMRLCREHGVLYVDTVVEPWLGFYFDADADNEARTNYALRETVRELKRDW-PGGPTAVS 149 (471)
T ss_pred HHCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC-CCCCEEEE
T ss_conf 62677788799801157889999999980987755440356886667779855666699999999999657-99980777
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCC------------------------CCEEEEEECCCC--CCCC---CCCCCCCHHHHH
Q ss_conf 37501114889999999974366------------------------638976302478--8886---665425689988
Q gi|254780742|r 148 GAGFDPGVVNAFARLAQDEYFDK------------------------ITDIDIIDVNAG--KHDK---YFATNFDAEINL 198 (419)
Q Consensus 148 ~~G~~PGl~~lla~~~~~~~~d~------------------------~~~i~~~~~~~~--~~~~---~~~~~~s~~~~l 198 (419)
T Consensus 150 ~hGANPGlVShfvKqaLldiA~~~~~~~~~p~~~~r~~wa~LA~~LgVkvIHiaERDTQ~s~~PK~~~eFvNTWSveGF~ 229 (471)
T pfam06408 150 TCGANPGMVSWFVKQALVDLAADLGLDNSEPSNDDREGWAKLAKKLGVKGIHIAERDTQRASDPKPVNEFVNTWSVEGFI 229 (471)
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCHHHHH
T ss_conf 46899518999999999999998644567887413688999999829958995141132347899889445466211146
Q ss_pred HHCCCCEEEE---------------ECC---EEEEECCCCCCEEEE-CCCCCCCEEEEECCCCHHHHHHCCCCC
Q ss_conf 6225982999---------------999---589954677526897-788776403640484234565348663
Q gi|254780742|r 199 REFTGVVYSW---------------QKN---QWCVNKMFEISRTYD-LPTVGQHKVYLSGHDEIHSLFKNIQGA 253 (419)
Q Consensus 199 ~~~~~~~~~~---------------~~G---~~~~~~~~~~~~~~~-fp~~g~~~~~~~~~~e~~tl~~~~~~~ 253 (419)
T Consensus 230 ~EG~qPAElGWGTHE~~~P~~a~~h~~G~~~~I~l~~pG~~T~VrSW~P~~g~~~G~lI~H~Ea~sI~d~lTv~ 303 (471)
T pfam06408 230 EEGLQPAELGWGTHETWMPKNAKKHKKGPKAAIYLPQPGANTRVRSWCPTLGAQYGFLVTHNEAISISDFLTVR 303 (471)
T ss_pred HHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCEEHHHEEEEC
T ss_conf 53675242053346543687764478898746887488646469875589885267998556301520236742