HHsearch alignment for GI: 254780743 and conserved domain: PRK10201

>PRK10201 G/U mismatch-specific DNA glycosylase; Provisional.
Probab=98.67  E-value=9.5e-07  Score=58.52  Aligned_cols=140  Identities=16%  Similarity=0.228  Sum_probs=101.6

Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC-------------CCCEEEEEECCC-CCCCCCCHHH
Q ss_conf             88884899857898300112001207004899999986098622-------------210000000122-5666677889
Q gi|254780743|r  105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT-------------QIHISMISPWHP-PGNRNLSNIE  170 (261)
Q Consensus       105 ~~~a~imiVgeaPg~~Ed~~G~pF~G~aG~lL~~mL~aigl~r~-------------~vyitn~vkcrP-p~nr~p~~~e  170 (261)
T Consensus         7 ~p~L~vlF~GiNPgl~Sa~~g~~fA~pgN-rFW~~L~~aGlt~r~l~p~ed~~Ll~~giG~TnlV~-R~T~~a~eL~~~E   84 (168)
T PRK10201          7 APGLRVVFCGINPGLSSAGTGFPFAHPAN-RFWKVIHQAGFTDRQLKPEEAQHLLDYRCGVTKLVD-RPTVQANEVSKQE   84 (168)
T ss_pred             CCCCEEEEEEECCCHHHHHCCCCCCCCCC-CHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECC-CCCCCHHHCCHHH
T ss_conf             89984899974978888853987789986-348999986898866686664138871977203456-7788936669999


Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCEEEEEEECHHHHHCCH-HHHHHHHH
Q ss_conf             99999999998632297679952559999984465331011065057664289737899970803883365-98999999
Q gi|254780743|r  171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP-LIKKNTWH  249 (261)
Q Consensus       171 i~~c~p~L~~ei~li~Pk~ii~lG~~a~~~ll~~~~~~i~~~rG~~~~~~~~~~~i~~~pt~HPs~LLr~P-~~K~~aW~  249 (261)
T Consensus        85 ~~~g~~~L~~ki~~~~P~~vaf~Gk~ay~~~fg~~~~~~----G~-Q~~~ig--~t~vwVlPspSGln~~~~~~l~~~yr  157 (168)
T PRK10201         85 LRSGGRKLIEKIEDYQPQALAILGKQAYEQGFSQRGAQW----GK-QTLTIG--STQIWVLPNPSGLNRVSLEKLVEAYR  157 (168)
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCC----CC-CCCCCC--CCEEEEECCCCCCCCCCHHHHHHHHH
T ss_conf             998899999999986997899977999999968998845----45-877778--81289931885002237999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780743|r  250 ALIT  253 (261)
Q Consensus       250 DL~~  253 (261)
T Consensus       158 eL~~  161 (168)
T PRK10201        158 ELDQ  161 (168)
T ss_pred             HHHH
T ss_conf             9999