HHsearch alignment for GI: 254780743 and conserved domain: pfam03167
>pfam03167 UDG Uracil DNA glycosylase superfamily.
Probab=100.00 E-value=4e-40 Score=248.79 Aligned_cols=142 Identities=23% Similarity=0.455 Sum_probs=126.7
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 36788888489985789830011200120700489999998609862221000000012256666778899999999999
Q gi|254780743|r 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 (261)
Q Consensus 101 ~g~G~~~a~imiVgeaPg~~Ed~~G~pF~G~aG~lL~~mL~aigl~r~~vyitn~vkcrPp~nr~p~~~ei~~c~p~L~~ 180 (261)
T Consensus 1 ~~~g~~~a~i~ivg~~Pg~~~~~~G~~f~g~~g~~l~~~l~~~gl~~~~~~itn~~~c~~~~~~~~~~~ei~~~~~~L~~ 80 (147)
T pfam03167 1 PGFGPPNAKVLIVGEAPGPGEDATGLPFAGRAGNLLWRILAEAGLAREGVYLTNVVKCPRPVGRKPTRSEIAACWPYLLE 80 (147)
T ss_pred CCCCCCCCCEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99899999999996798756763699675756999999999828875577998532256876799898999998999999
Q ss_pred HHHHCCCCEEEEECHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCEEEEEEECHHHHHCCHHHH-----HHHHHHHH
Q ss_conf 8632297679952559999984465331011065057664289737899970803883365989-----99999999
Q gi|254780743|r 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALI 252 (261)
Q Consensus 181 ei~li~Pk~ii~lG~~a~~~ll~~~~~~i~~~rG~~~~~~~~~~~i~~~pt~HPs~LLr~P~~K-----~~aW~DL~ 252 (261)
T Consensus 81 ~i~~i~p~viv~lG~~a~~~~~~~~~-~~~~~---------~~~~~~v~~~~HPS~l~~~~~~~~~~~~~~~~~~L~ 147 (147)
T pfam03167 81 ELALLRPKVVVLLGKTAAKAFLGLGK-KESLF---------EGGGIPVLPLPHPSPLNRNPGFKRPEAFREALEDLK 147 (147)
T ss_pred HHHHCCCCEEEEECHHHHHHHHCCCC-CCCEE---------CCCCCEEEEECCCHHHHCCHHHCCHHHHHHHHHHHC
T ss_conf 99855966899988999999847787-65224---------269917999559079741976417478999999729