HHsearch alignment of GI: 254780743 and MMDB domain: 2j8x_A_48-231
>2j8x_A (A:48-231) Uracil-DNA glycosylase; hydrolase/inhibitor, hydrolase/inhibitor complex, EBV, DNA repair, lytic protein, epstein-BARR virus; 2.3A {Epstein-barr virus}
Probab=93.33 E-value=0.54 Score=25.34 Aligned_cols=114 Identities=15% Similarity=0.207 Sum_probs=67.1
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCH----HHHHHHHHHC-----CCC-----------CCCCCEEEEEECCCCCCCCC
Q ss_conf 884899857898300112001207004----8999999860-----986-----------22210000000122566667
Q gi|254780743|r 107 GQDLMIIGYTPSDSDNISGKPFSGKTG----NMLDKMLQSI-----EIM-----------RTQIHISMISPWHPPGNRNL 166 (261)
Q Consensus 107 ~a~imiVgeaPg~~Ed~~G~pF~G~aG----~lL~~mL~ai-----gl~-----------r~~vyitn~vkcrPp~nr~p 166 (261)
+-||+|+|+-|-..+...|..|.-+.| .-|.+|++++ |+. ++.|.+-|.+---..|...
T Consensus 11 ~vkVVIlGQDPY~~~~A~GlaFsv~~~~~~p~SL~NI~kel~~d~~~~~~p~~g~L~~WakQGVLLLNt~LTv~~g~~~- 89 (184)
T 2j8x_A 11 DIKVVILGQDPYHGGQANGLAFSVAYGFPVPPSLRNIYAELHRSLPEFSPPDHGCLDAWASQGVLLLNTILTVQKGKPG- 89 (184)
T ss_dssp GCCEEEEECSCCSSSCCCSSSSCCCTTSCCCHHHHHHHHHHHHHCTTCCCCSSCCCHHHHTTTEEEEESSCCEETTBTT-
T ss_pred HEEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEEEEEEEEECCCCC-
T ss_conf 8489998546787886324553045689788229999999986347687667798578864976888657887379999-
Q ss_pred CHHH--HHHHHHHHHHHHH-HCCCCEEEEECHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCEEEEEEECHHHHH
Q ss_conf 7889--9999999999863-2297679952559999984465331011065057664289737899970803883
Q gi|254780743|r 167 SNIE--MEICRPIIMRQIE-LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 (261)
Q Consensus 167 ~~~e--i~~c~p~L~~ei~-li~Pk~ii~lG~~a~~~ll~~~~~~i~~~rG~~~~~~~~~~~i~~~pt~HPs~LL 238 (261)
+... -+.+..-+.++|. -.++-+.++.|+.|.+.. ..|... ...++-+.|||.+-
T Consensus 90 SH~~~gWe~ft~~ii~~l~~~~~~ivf~LwG~~A~~~~-----~~i~~~------------~h~il~~~HPSpls 147 (184)
T 2j8x_A 90 SHADIGWAWFTDHVISLLSERLKACVFMLWGAKAGDKA-----SLINSK------------KHLVLTSQHPSPLA 147 (184)
T ss_dssp TTTTSSHHHHHHHHHHHHHHHCSSCEEEEESHHHHGGG-----GGSCTT------------TSEEEEECCSSGGG
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH-----HHCCCC------------CCEEEECCCCCCCC
T ss_conf 85555818899999999981468859998103455666-----532578------------97699767999511